Query psy14060
Match_columns 283
No_of_seqs 196 out of 2413
Neff 10.6
Searched_HMMs 29240
Date Fri Aug 16 18:33:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14060.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14060hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3b43_A Titin; I-SET IG fold, e 100.0 4.2E-34 1.5E-38 256.4 29.2 245 20-278 267-519 (570)
2 3b43_A Titin; I-SET IG fold, e 100.0 7.9E-33 2.7E-37 248.1 34.0 248 20-280 171-428 (570)
3 2rik_A Titin; I-SET IG fold, p 100.0 1.1E-30 3.7E-35 213.9 29.8 222 49-280 5-236 (284)
4 2yd9_A Receptor-type tyrosine- 100.0 4.7E-29 1.6E-33 206.4 20.9 224 49-280 6-249 (304)
5 3kld_A Contactin 4, axcam, BIG 100.0 1.2E-28 4.2E-33 210.5 22.4 242 19-280 76-339 (384)
6 3laf_A Deleted in colorectal c 100.0 4.5E-28 1.6E-32 207.8 23.6 241 20-280 96-356 (403)
7 1qz1_A Neural cell adhesion mo 100.0 2E-27 6.9E-32 195.0 23.6 211 59-280 13-240 (291)
8 3p3y_A Neurofascin; IG domains 100.0 5.2E-28 1.8E-32 207.5 20.3 241 20-280 91-356 (404)
9 2wim_A N-CAM 2, NCAM2, neural 100.0 3.6E-28 1.2E-32 199.5 18.4 209 59-280 15-238 (291)
10 2ec8_A MAST/stem cell growth f 100.0 5.7E-28 1.9E-32 214.4 20.1 240 20-277 183-447 (524)
11 3qs7_E FL cytokine receptor; i 100.0 1E-27 3.5E-32 207.2 21.1 240 20-280 117-370 (423)
12 1cs6_A Axonin-1; neural cell a 100.0 1.9E-27 6.5E-32 202.7 21.9 239 20-280 76-338 (382)
13 3qs9_E FL cytokine receptor; i 100.0 8E-28 2.7E-32 213.2 18.7 227 20-277 205-448 (527)
14 1e07_A Carcinoembryonic antige 100.0 7.7E-27 2.6E-31 212.0 25.0 237 20-279 356-602 (642)
15 2y25_A Myomesin; structural pr 100.0 3.2E-28 1.1E-32 202.1 14.4 230 49-280 7-266 (317)
16 2ec8_A MAST/stem cell growth f 100.0 2.1E-27 7.1E-32 210.8 20.3 240 20-280 94-358 (524)
17 3dmk_A DOWN syndrome cell adhe 100.0 1.1E-26 3.9E-31 216.3 26.0 241 20-280 320-570 (816)
18 1bih_A Hemolin; insect immunit 100.0 1E-26 3.6E-31 198.8 21.2 241 20-280 76-353 (395)
19 2rik_A Titin; I-SET IG fold, p 100.0 5.7E-26 2E-30 185.8 24.4 201 20-224 75-283 (284)
20 2y23_A Myomesin; structural pr 100.0 1.6E-26 5.5E-31 191.4 20.7 217 60-279 13-265 (312)
21 2v5m_A Dscam; neurobiology SPL 99.9 1.8E-26 6.1E-31 197.0 21.1 239 20-280 79-351 (388)
22 3dmk_A DOWN syndrome cell adhe 99.9 8.8E-27 3E-31 217.0 20.6 239 20-277 504-755 (816)
23 3qs9_E FL cytokine receptor; i 99.9 1.8E-26 6.3E-31 204.4 19.3 240 20-280 117-370 (527)
24 1e07_A Carcinoembryonic antige 99.9 2.3E-25 7.7E-30 202.3 26.8 238 20-279 178-424 (642)
25 2ocw_A Polymeric-immunoglobuli 99.9 1.2E-25 4.3E-30 201.8 24.0 239 20-279 199-489 (585)
26 2rcj_C Light chain; immunoglob 99.9 2.3E-25 7.8E-30 197.6 24.2 246 21-279 85-366 (523)
27 3ejj_X Macrophage colony-stimu 99.9 4.9E-26 1.7E-30 186.5 17.6 209 59-279 15-230 (289)
28 1wio_A CD4, T-cell surface gly 99.9 4.2E-26 1.4E-30 193.3 16.1 216 20-278 81-325 (363)
29 2rcj_C Light chain; immunoglob 99.9 4.9E-25 1.7E-29 195.5 22.3 214 59-278 11-263 (523)
30 2o26_X MAST/stem cell growth f 99.9 8.7E-26 3E-30 185.4 13.7 201 59-276 23-229 (290)
31 4dep_C Interleukin-1 receptor 99.9 1.6E-25 5.4E-30 188.6 12.9 211 59-279 18-273 (349)
32 2ocw_A Polymeric-immunoglobuli 99.9 7.8E-24 2.7E-28 190.2 24.3 234 21-275 90-376 (585)
33 2jll_A NCAM2, neural cell adhe 99.9 3.5E-23 1.2E-27 176.6 26.8 215 50-275 2-239 (389)
34 1itb_B Type 1 interleukin-1 re 99.9 1E-25 3.5E-30 187.1 10.6 210 59-280 16-253 (315)
35 3oq3_B IFN-alpha/beta binding 99.9 5.6E-25 1.9E-29 184.0 15.1 206 60-277 41-273 (329)
36 1ry7_B FGFR-3, fibroblast grow 99.9 2.6E-26 9E-31 192.1 6.7 210 58-278 18-268 (334)
37 1z7z_I Intercellular adhesion 99.9 1.2E-22 4.1E-27 176.7 29.8 235 16-277 59-320 (450)
38 1qgc_4 Protein (immunoglobulin 99.9 6.6E-25 2.3E-29 190.3 15.2 250 20-278 89-387 (438)
39 2wng_A Tyrosine-protein phosph 99.9 4.5E-24 1.6E-28 178.2 19.7 208 59-279 14-265 (327)
40 3vh8_G Killer cell immunoglobu 99.9 1.5E-24 5E-29 180.3 16.2 221 47-278 22-259 (316)
41 4dkd_C Macrophage colony-stimu 99.9 4.1E-25 1.4E-29 181.3 12.6 209 59-279 15-230 (292)
42 3rjd_A High affinity immunoglo 99.9 1.7E-24 6E-29 174.7 16.0 199 59-279 12-218 (262)
43 3qs7_E FL cytokine receptor; i 99.9 6.8E-25 2.3E-29 189.5 14.4 201 59-279 59-271 (423)
44 2a38_A Titin; Z1Z2, structural 99.9 1.3E-23 4.5E-28 162.0 19.6 165 59-223 16-193 (194)
45 3laf_A Deleted in colorectal c 99.9 2E-24 7E-29 185.1 16.5 215 59-280 32-265 (403)
46 3rbs_A Myomesin-1; immunoglobu 99.9 8.9E-24 3E-28 165.0 18.3 172 49-223 3-205 (207)
47 1z7z_I Intercellular adhesion 99.9 1.9E-24 6.4E-29 188.2 15.8 228 20-277 156-411 (450)
48 2nzi_A Titin; IG-domain, FNIII 99.9 1.9E-22 6.7E-27 166.4 26.1 221 49-276 4-251 (305)
49 4fqp_A Poliovirus receptor; im 99.9 5.2E-24 1.8E-28 176.8 15.3 210 60-279 12-261 (313)
50 1igt_B IGG2A intact antibody - 99.9 4.3E-23 1.5E-27 179.4 20.8 248 20-278 93-390 (444)
51 1qgc_4 Protein (immunoglobulin 99.9 1.3E-23 4.4E-28 182.1 17.4 208 60-277 13-263 (438)
52 2wv3_A Neuroplastin; igcam, me 99.9 1.8E-22 6.2E-27 155.3 21.6 165 60-224 14-189 (190)
53 3v2a_R Vascular endothelial gr 99.9 3.3E-26 1.1E-30 211.7 0.0 247 21-280 396-710 (772)
54 3u83_A Poliovirus receptor-rel 99.9 6.4E-24 2.2E-28 177.3 13.7 206 59-279 25-276 (331)
55 2j8h_A Titin, connectin; cardi 99.9 1.1E-22 3.8E-27 157.2 19.7 166 59-224 15-196 (197)
56 3o4o_C Interleukin-1 receptor 99.9 6E-25 2.1E-29 184.3 7.1 221 49-278 18-272 (339)
57 4fa8_A Secreted protein BARF1; 99.9 8.3E-24 2.8E-28 164.6 12.8 159 59-217 4-194 (203)
58 3lcy_A Titin; A-BAND, IG tande 99.9 1.2E-22 4.3E-27 156.7 19.3 167 59-225 18-196 (197)
59 3kld_A Contactin 4, axcam, BIG 99.9 4.9E-23 1.7E-27 175.8 17.5 199 20-224 171-382 (384)
60 1za6_B IGG heavy chain; immuno 99.9 1.5E-23 5.1E-28 176.4 13.9 213 59-278 11-286 (344)
61 4fom_A Poliovirus receptor-rel 99.9 2.3E-24 7.8E-29 178.4 8.7 211 59-279 10-256 (308)
62 2r15_A Myomesin-1; sarcomeric 99.9 9.6E-22 3.3E-26 153.6 21.9 163 63-225 17-210 (212)
63 1iga_A IGA1; immunoglobulin; N 99.9 6.9E-22 2.3E-26 173.3 23.0 250 20-280 94-396 (475)
64 2yd6_A PTPRD protein; hydrolas 99.9 1.5E-21 5.2E-26 152.8 22.3 167 59-225 17-204 (212)
65 1bih_A Hemolin; insect immunit 99.9 1.3E-23 4.4E-28 179.6 11.3 214 59-279 17-255 (395)
66 1qz1_A Neural cell adhesion mo 99.9 2.7E-22 9.1E-27 164.4 18.4 198 20-225 76-290 (291)
67 2yd9_A Receptor-type tyrosine- 99.9 3.7E-22 1.2E-26 164.9 19.2 197 20-225 78-291 (304)
68 1wio_A CD4, T-cell surface gly 99.9 8.2E-24 2.8E-28 179.2 9.2 190 60-279 6-224 (363)
69 2wim_A N-CAM 2, NCAM2, neural 99.9 2.7E-22 9.3E-27 164.4 17.8 196 20-225 74-284 (291)
70 2oz4_A Intercellular adhesion 99.9 5.4E-23 1.8E-27 166.6 13.3 191 59-275 14-224 (265)
71 2v44_A NCAM2, neural cell adhe 99.9 3.1E-22 1.1E-26 153.7 16.4 162 59-223 13-185 (189)
72 1cs6_A Axonin-1; neural cell a 99.9 1.9E-22 6.4E-27 171.8 16.3 201 20-224 172-381 (382)
73 2yd1_A Tyrosine-protein phosph 99.9 2.9E-21 9.8E-26 151.2 21.0 173 49-225 6-200 (212)
74 1hzh_H IGG, immunoglobulin hea 99.9 1.2E-22 4.3E-27 177.2 14.7 218 59-278 11-295 (457)
75 2y25_A Myomesin; structural pr 99.9 6.2E-23 2.1E-27 170.2 11.7 201 20-225 75-315 (317)
76 2c5d_C AXL oncogene, tyrosine- 99.9 5.1E-21 1.7E-25 147.7 21.3 158 59-223 13-191 (195)
77 3v2a_R Vascular endothelial gr 99.9 2.8E-23 9.7E-28 192.1 10.1 236 20-274 197-462 (772)
78 3ejj_X Macrophage colony-stimu 99.9 1.3E-21 4.5E-26 160.1 18.7 198 20-225 65-281 (289)
79 2a38_A Titin; Z1Z2, structural 99.9 3.8E-21 1.3E-25 148.1 20.0 142 132-280 4-147 (194)
80 1hzh_H IGG, immunoglobulin hea 99.9 2.4E-21 8.2E-26 169.0 20.4 249 20-278 93-399 (457)
81 2v5m_A Dscam; neurobiology SPL 99.9 8.4E-22 2.9E-26 168.0 16.6 190 19-223 178-387 (388)
82 3p3y_A Neurofascin; IG domains 99.9 1E-21 3.5E-26 168.2 16.1 203 19-225 185-403 (404)
83 2o26_X MAST/stem cell growth f 99.9 1.2E-21 4.2E-26 160.6 15.9 194 20-225 71-288 (290)
84 1epf_A NCAM, protein (neural c 99.9 7.1E-21 2.4E-25 146.2 19.2 162 59-223 13-189 (191)
85 1igt_B IGG2A intact antibody - 99.9 2.5E-21 8.6E-26 168.3 18.5 219 59-279 11-287 (444)
86 2y23_A Myomesin; structural pr 99.9 1.9E-21 6.6E-26 160.8 16.8 200 20-223 72-310 (312)
87 2va4_A NCAM2, N-CAM 2, neural 99.9 4E-21 1.4E-25 147.6 17.2 161 60-223 16-191 (192)
88 1rhf_A Tyrosine-protein kinase 99.9 6.6E-21 2.2E-25 145.4 17.6 156 59-223 13-181 (182)
89 2v5t_A NCAM2, N-CAM 2, neural 99.9 4.9E-21 1.7E-25 146.8 16.5 161 59-224 13-187 (189)
90 3mjg_X Beta-type platelet-deri 99.9 2.6E-21 9E-26 158.4 15.8 196 60-276 12-221 (289)
91 2iep_A Muscle-specific kinase 99.9 1.7E-21 6E-26 149.7 13.6 162 59-225 18-190 (192)
92 3b5h_A Cervical EMMPRIN, HAB18 99.9 2.2E-20 7.7E-25 142.7 19.7 162 59-224 9-182 (184)
93 3lcy_A Titin; A-BAND, IG tande 99.9 2E-20 7E-25 144.2 19.5 141 131-281 5-148 (197)
94 2yd1_A Tyrosine-protein phosph 99.9 3.1E-20 1.1E-24 145.3 20.7 145 132-279 5-153 (212)
95 1igy_B IGG1 intact antibody MA 99.9 1.7E-23 5.7E-28 181.5 1.8 249 21-278 93-380 (434)
96 2wqr_A IG epsilon chain C regi 99.9 1.3E-21 4.3E-26 163.2 12.9 210 64-279 25-264 (323)
97 2yd6_A PTPRD protein; hydrolas 99.9 4.1E-20 1.4E-24 144.6 20.8 147 131-280 4-152 (212)
98 2c5d_C AXL oncogene, tyrosine- 99.9 1.8E-20 6.2E-25 144.6 17.7 138 133-280 2-151 (195)
99 1itb_B Type 1 interleukin-1 re 99.9 1.2E-20 4E-25 156.4 17.3 201 20-224 76-313 (315)
100 2c1o_A IGK-C protein; FAB frag 99.9 4.4E-21 1.5E-25 154.4 13.6 168 104-280 11-200 (254)
101 2j8h_A Titin, connectin; cardi 99.9 7.8E-20 2.7E-24 141.1 19.0 144 132-280 3-148 (197)
102 4dep_C Interleukin-1 receptor 99.9 1.6E-21 5.6E-26 164.0 9.7 201 20-225 93-333 (349)
103 3oq3_B IFN-alpha/beta binding 99.9 7.2E-20 2.5E-24 152.9 19.6 195 20-223 104-328 (329)
104 3s97_C Contactin-1; carbonic a 99.8 1.2E-20 4.3E-25 145.8 13.7 162 59-224 19-200 (201)
105 3p2t_A Leukocyte immunoglobuli 99.8 2.1E-20 7.2E-25 144.5 14.9 164 48-213 4-179 (196)
106 2d3v_A Leukocyte immunoglobuli 99.8 6.7E-21 2.3E-25 147.4 11.8 165 48-214 4-181 (196)
107 1ry7_B FGFR-3, fibroblast grow 99.8 1.6E-21 5.4E-26 163.0 8.1 206 20-226 75-328 (334)
108 1oll_A NK receptor; immune sys 99.8 3.5E-20 1.2E-24 142.4 14.8 159 48-212 3-172 (188)
109 2v44_A NCAM2, neural cell adhe 99.8 1.7E-19 5.8E-24 138.3 18.5 133 135-278 4-138 (189)
110 1epf_A NCAM, protein (neural c 99.8 2.3E-19 7.8E-24 137.8 19.2 137 133-279 2-143 (191)
111 1rhf_A Tyrosine-protein kinase 99.8 6.8E-20 2.3E-24 139.7 15.9 137 133-279 2-142 (182)
112 1ugn_A LIR1, leukocyte immunog 99.8 1.3E-20 4.5E-25 145.9 11.8 164 48-213 4-181 (198)
113 3mjg_X Beta-type platelet-deri 99.8 4.7E-20 1.6E-24 151.0 15.6 200 20-226 65-279 (289)
114 4dkd_C Macrophage colony-stimu 99.8 9.4E-21 3.2E-25 155.2 11.4 199 20-225 65-281 (292)
115 1igy_B IGG1 intact antibody MA 99.8 1.1E-21 3.6E-26 170.2 5.9 218 59-278 10-276 (434)
116 1f97_A Junction adhesion molec 99.8 1.6E-20 5.4E-25 146.5 11.8 163 59-225 12-207 (212)
117 1fnl_A Low affinity immunoglob 99.8 3.4E-20 1.2E-24 140.7 13.1 163 48-224 6-173 (175)
118 2ghw_B Anti-SARS SCFV antibody 99.8 4.7E-19 1.6E-23 141.8 20.5 166 59-224 13-241 (247)
119 2oz4_A Intercellular adhesion 99.8 2.5E-20 8.4E-25 150.9 13.1 183 20-225 75-264 (265)
120 3k0w_A Mucosa-associated lymph 99.8 1.8E-20 6.3E-25 147.3 11.9 155 59-225 29-202 (218)
121 2ifg_A High affinity nerve gro 99.8 8.5E-20 2.9E-24 153.7 16.6 173 49-225 158-345 (347)
122 4fqp_A Poliovirus receptor; im 99.8 3.9E-19 1.3E-23 147.3 20.3 193 21-225 94-304 (313)
123 3mj8_L Stimulatory hamster ant 99.8 4.4E-20 1.5E-24 144.4 13.8 161 59-219 11-207 (213)
124 2vr9_A Roundabout 1, ROBO; imm 99.8 2.9E-20 9.8E-25 145.8 12.7 173 49-224 9-205 (217)
125 3sgj_C Human FCG3A receptor; r 99.8 2.7E-20 9.1E-25 145.0 12.3 165 48-226 6-175 (204)
126 4fa8_A Secreted protein BARF1; 99.8 1.6E-20 5.5E-25 146.0 10.9 126 142-277 2-147 (203)
127 2iep_A Muscle-specific kinase 99.8 1.2E-19 4.1E-24 139.4 15.7 138 131-280 5-144 (192)
128 2wv3_A Neuroplastin; igcam, me 99.8 6.2E-19 2.1E-23 135.4 19.2 130 132-278 2-136 (190)
129 2x1w_L Vascular endothelial gr 99.8 3.1E-20 1.1E-24 145.5 11.9 164 59-225 18-207 (213)
130 2jll_A NCAM2, neural cell adhe 99.8 3.5E-19 1.2E-23 151.8 19.5 137 133-280 1-144 (389)
131 3rbs_A Myomesin-1; immunoglobu 99.8 2.5E-19 8.4E-24 139.8 16.9 144 133-280 3-161 (207)
132 2gi7_A GPVI protein; IG-like d 99.8 4.9E-20 1.7E-24 141.1 12.4 156 48-213 7-168 (184)
133 4fom_A Poliovirus receptor-rel 99.8 1.3E-19 4.5E-24 149.7 16.0 196 21-225 89-300 (308)
134 3grw_A Fibroblast growth facto 99.8 5.4E-20 1.9E-24 146.5 12.8 167 59-225 26-218 (241)
135 1vca_A VCAM-D1,2, human vascul 99.8 8.4E-20 2.9E-24 141.9 13.5 164 61-225 14-197 (202)
136 3u83_A Poliovirus receptor-rel 99.8 2.2E-19 7.5E-24 149.8 16.8 196 21-225 107-320 (331)
137 1uct_A Immunoglobulin alpha FC 99.8 1.1E-19 3.8E-24 142.9 13.8 173 48-225 8-198 (218)
138 2v9r_A Roundabout homolog 1; p 99.8 7E-20 2.4E-24 142.9 12.3 164 59-225 20-202 (212)
139 3r4d_A CEA-related cell adhesi 99.8 3.4E-19 1.2E-23 138.7 15.2 158 59-224 10-199 (208)
140 2c1o_A IGK-C protein; FAB frag 99.8 6.5E-20 2.2E-24 147.5 11.4 187 20-215 18-245 (254)
141 3bp6_B Programmed cell death 1 99.8 1.2E-19 4.2E-24 140.7 12.5 161 59-225 13-193 (202)
142 3jz7_A MCAR, CAR, coxsackievir 99.8 1.3E-20 4.5E-25 147.1 7.0 162 59-224 11-211 (214)
143 1iga_A IGA1; immunoglobulin; N 99.8 1.3E-18 4.3E-23 152.6 20.4 210 59-270 12-284 (475)
144 1p6f_A NKP46, natural cytotoxi 99.8 4.2E-19 1.4E-23 141.8 15.7 173 47-225 5-191 (242)
145 1nqb_A Single-chain antibody f 99.8 9.9E-19 3.4E-23 140.9 18.0 166 59-225 11-233 (256)
146 1f3r_B FV antibody fragment; I 99.8 5.8E-19 2E-23 142.3 16.4 153 59-212 11-232 (257)
147 1f2q_A High affinity immunoglo 99.8 7.9E-20 2.7E-24 138.8 10.0 164 48-225 3-171 (176)
148 3d9a_L Light chain of hyhel10 99.8 1.2E-19 4E-24 142.0 11.1 158 59-216 12-204 (213)
149 4f80_A Butyrophilin subfamily 99.8 2.2E-19 7.6E-24 141.8 12.5 165 60-225 16-213 (226)
150 1nbq_A JAM, junctional adhesio 99.8 1.8E-20 6.2E-25 145.8 5.9 156 59-218 15-200 (209)
151 3sbw_C Programmed cell death 1 99.8 3.2E-19 1.1E-23 140.3 12.9 166 60-225 13-211 (222)
152 3ojm_B Fibroblast growth facto 99.8 1.9E-19 6.5E-24 142.2 11.6 168 59-226 30-222 (231)
153 2ny1_B T-cell surface glycopro 99.8 3.5E-19 1.2E-23 136.1 12.7 149 60-225 7-179 (184)
154 1b6u_A KIR2DL3, P58 killer cel 99.8 6.4E-19 2.2E-23 141.8 14.8 212 48-274 6-240 (257)
155 2nzi_A Titin; IG-domain, FNIII 99.8 3E-18 1E-22 141.2 18.9 144 132-280 3-148 (305)
156 1lk3_L 9D7 light chain; antige 99.8 2.2E-19 7.6E-24 140.2 11.5 157 59-215 11-202 (210)
157 2wng_A Tyrosine-protein phosph 99.8 1.4E-18 4.6E-23 144.9 16.9 194 20-219 88-313 (327)
158 3vh8_G Killer cell immunoglobu 99.8 6.6E-19 2.2E-23 146.2 14.8 188 20-214 88-297 (316)
159 2v5t_A NCAM2, N-CAM 2, neural 99.8 1.4E-18 4.7E-23 133.0 15.1 135 133-280 2-142 (189)
160 3nl4_L Antigen binding fragmen 99.8 2.1E-18 7E-23 134.9 16.3 151 59-209 12-198 (213)
161 2va4_A NCAM2, N-CAM 2, neural 99.8 8.3E-18 2.9E-22 129.0 19.2 134 133-279 2-139 (192)
162 3s96_B 3B5H10 FAB light chain; 99.8 9.2E-19 3.1E-23 137.3 14.1 159 59-218 11-213 (218)
163 3k0w_A Mucosa-associated lymph 99.8 2.1E-18 7.1E-23 135.5 15.8 140 132-280 17-162 (218)
164 3knb_B Obscurin-like protein 1 99.8 2E-18 6.7E-23 119.9 13.4 94 132-225 12-105 (107)
165 3tv3_L PGT128 light chain, IG 99.8 4.2E-19 1.4E-23 138.6 11.2 160 59-219 11-205 (211)
166 1zvo_C Myeloma immunoglobulin 99.8 1.2E-17 4E-22 147.7 21.7 218 59-278 11-341 (512)
167 3umt_A SCFV heavy chain and li 99.8 5.4E-18 1.8E-22 136.5 17.8 167 59-225 13-245 (256)
168 3nl4_L Antigen binding fragmen 99.8 2E-18 6.7E-23 135.0 14.7 139 134-279 2-158 (213)
169 1q0x_L FAB 9B1, light chain; a 99.8 1.9E-18 6.4E-23 135.0 14.6 157 59-215 11-205 (212)
170 1jbj_A CD3 epsilon and gamma e 99.8 1.3E-19 4.4E-24 139.0 7.6 142 60-215 11-179 (186)
171 3r06_A Anti-mouse CD3epsilon a 99.8 6.7E-19 2.3E-23 137.6 11.8 156 59-214 12-202 (213)
172 2vr9_A Roundabout 1, ROBO; imm 99.8 2.5E-19 8.7E-24 140.4 9.4 140 131-279 7-152 (217)
173 1nkr_A P58-CL42 KIR; inhibitor 99.8 1.2E-17 4.1E-22 129.5 18.7 161 48-212 7-184 (201)
174 2fbo_J V1V2;, variable region- 99.8 1.8E-18 6.3E-23 138.3 14.2 125 97-222 90-249 (250)
175 4frw_A Poliovirus receptor-rel 99.8 4.5E-19 1.5E-23 138.4 10.4 165 59-223 10-209 (218)
176 3juy_B 3B3 single chain varian 99.8 9.6E-18 3.3E-22 135.0 18.2 153 59-212 17-243 (256)
177 4i0k_A CD276 antigen; immunogl 99.8 1E-18 3.5E-23 137.4 12.2 165 60-225 7-206 (222)
178 2r15_A Myomesin-1; sarcomeric 99.8 3.1E-18 1.1E-22 133.6 14.5 135 146-280 15-161 (212)
179 1zvo_C Myeloma immunoglobulin 99.8 4.7E-17 1.6E-21 143.8 23.8 131 141-279 305-446 (512)
180 3uzq_A Anti-dengue MAB 4E11; d 99.8 2.1E-18 7.3E-23 138.6 13.7 166 59-225 12-244 (253)
181 1qok_A MFE-23 recombinant anti 99.8 1.2E-17 4E-22 136.5 18.3 165 59-225 37-268 (282)
182 2p1y_A Bispecific alpha/beta T 99.8 3.3E-18 1.1E-22 136.0 14.6 153 59-212 11-222 (238)
183 3mj6_A Junctional adhesion mol 99.8 5.5E-19 1.9E-23 143.0 10.2 183 59-255 16-258 (268)
184 3rjd_A High affinity immunoglo 99.8 1.7E-17 6E-22 133.5 18.9 177 20-215 62-249 (262)
185 3esu_F Antibody 14B7* light ch 99.8 4E-18 1.4E-22 136.6 15.0 151 60-210 16-231 (250)
186 3o4o_C Interleukin-1 receptor 99.8 3.6E-20 1.2E-24 155.2 2.8 200 20-224 95-334 (339)
187 3ux9_B SCFV antibody; five hel 99.8 1.2E-17 4.2E-22 134.3 17.3 153 59-212 13-236 (256)
188 1moe_A Anti-CEA MAB T84.66; an 99.8 1.5E-17 5.2E-22 132.3 17.5 152 59-210 12-219 (240)
189 3auv_A SC-DSFV derived from th 99.8 1.5E-17 5E-22 135.5 17.7 153 59-211 23-235 (276)
190 1nfd_E H57 FAB; complex (immun 99.8 3.5E-19 1.2E-23 139.2 7.8 156 59-214 10-201 (212)
191 2xzc_L FAB A.17 light chain; i 99.8 2.5E-18 8.7E-23 134.7 12.7 157 59-216 11-206 (216)
192 2znx_A SCFV; fluorotryptohpan, 99.8 6.1E-18 2.1E-22 135.1 14.2 153 59-211 12-222 (242)
193 3ry4_A Low affinity immunoglob 99.8 3.9E-18 1.3E-22 128.5 12.2 152 49-214 4-159 (170)
194 1f97_A Junction adhesion molec 99.8 3.2E-18 1.1E-22 133.3 12.1 132 134-279 2-149 (212)
195 1svz_A Immunoglobulin;, single 99.8 1.7E-17 5.7E-22 132.8 16.5 153 59-211 12-228 (247)
196 3mj8_L Stimulatory hamster ant 99.8 1.1E-17 3.8E-22 130.7 15.0 136 137-279 5-159 (213)
197 3sob_L Antibody light chain; b 99.8 8.4E-18 2.9E-22 133.4 14.5 158 59-216 35-227 (237)
198 3gkz_A Anti-methamphetamine si 99.8 2E-17 6.7E-22 133.2 16.8 154 59-213 19-236 (257)
199 1c1e_H Catalytic antibody 1E9 99.8 5.1E-18 1.8E-22 133.3 13.0 161 59-220 11-215 (219)
200 2v9r_A Roundabout homolog 1; p 99.8 3.9E-18 1.3E-22 132.9 12.2 140 132-280 8-156 (212)
201 1vca_A VCAM-D1,2, human vascul 99.8 5.8E-17 2E-21 125.8 18.2 127 139-278 6-136 (202)
202 3ojm_B Fibroblast growth facto 99.8 3.2E-18 1.1E-22 135.1 11.0 140 133-278 15-164 (231)
203 1hng_A CD2; T lymphocyte adhes 99.8 6.6E-19 2.3E-23 133.8 6.8 140 60-222 8-173 (176)
204 3knb_A Titin; IG-like, titin, 99.8 1.9E-17 6.6E-22 113.5 13.2 94 132-225 4-99 (100)
205 3grw_A Fibroblast growth facto 99.8 1.1E-17 3.9E-22 133.0 13.5 142 132-279 10-161 (241)
206 3d9a_L Light chain of hyhel10 99.8 2E-17 7E-22 129.1 14.7 138 136-280 4-158 (213)
207 1q9r_B S25-2 FAB (IGG1K) heavy 99.8 2.4E-17 8.1E-22 129.8 14.8 159 59-220 11-218 (222)
208 3s97_C Contactin-1; carbonic a 99.8 5.2E-18 1.8E-22 131.0 10.7 138 139-279 14-156 (201)
209 2pet_A Lutheran blood group gl 99.8 1.1E-17 3.8E-22 132.1 12.8 152 59-211 11-211 (231)
210 3d9a_H Heavy chain of hyhel10 99.8 1.5E-17 5.1E-22 129.8 13.3 158 59-218 11-207 (210)
211 3r06_A Anti-mouse CD3epsilon a 99.7 4E-17 1.4E-21 127.5 15.2 139 134-279 2-157 (213)
212 3p2t_A Leukocyte immunoglobuli 99.7 1.3E-17 4.4E-22 128.8 12.1 135 132-278 4-140 (196)
213 2d3v_A Leukocyte immunoglobuli 99.7 6E-18 2E-22 130.7 10.1 135 132-278 4-140 (196)
214 2j6e_L IGM, FAB light chain; a 99.7 6.9E-18 2.4E-22 133.8 10.7 157 59-215 30-225 (234)
215 1lk3_L 9D7 light chain; antige 99.7 3.4E-17 1.2E-21 127.7 14.1 134 140-280 7-157 (210)
216 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 5.3E-17 1.8E-21 130.7 15.5 166 59-225 14-248 (256)
217 2ifg_A High affinity nerve gro 99.7 8.1E-19 2.8E-23 147.7 4.7 154 108-280 136-290 (347)
218 2gki_A Nuclease; anti-DNA anti 99.7 5.3E-17 1.8E-21 133.2 15.2 154 59-213 33-259 (291)
219 3bp6_B Programmed cell death 1 99.7 4.7E-17 1.6E-21 126.1 14.1 128 139-277 8-144 (202)
220 3bkj_L WO2 IGG2A FAB fragment 99.7 1.3E-17 4.4E-22 133.9 10.8 157 59-215 45-241 (252)
221 1x9q_A SCFV, 4M5.3 anti-fluore 99.7 1.5E-16 5.1E-21 128.9 17.0 153 59-211 26-254 (268)
222 3sgj_C Human FCG3A receptor; r 99.7 2.7E-17 9.3E-22 127.9 12.1 124 132-278 6-131 (204)
223 3s96_B 3B5H10 FAB light chain; 99.7 7.9E-17 2.7E-21 126.2 14.6 138 135-279 3-166 (218)
224 1pz5_B Heavy chain of FAB (SYA 99.7 6.9E-17 2.4E-21 126.9 14.0 159 59-218 11-214 (220)
225 2gjj_A A21 single-chain antibo 99.7 1.7E-16 5.8E-21 128.4 16.5 153 59-211 16-239 (264)
226 1dr9_A B7-1 (CD80), T lymphocy 99.7 2.2E-17 7.5E-22 127.8 10.7 156 59-220 5-196 (201)
227 3tv3_L PGT128 light chain, IG 99.7 5.1E-17 1.8E-21 126.7 12.8 130 142-279 9-156 (211)
228 1mq8_A ICAM-1, intercellular a 99.7 7.7E-18 2.6E-22 137.3 8.3 207 59-279 10-234 (291)
229 1fnl_A Low affinity immunoglob 99.7 5.4E-17 1.8E-21 123.0 12.3 125 131-278 5-131 (175)
230 4fmk_A Poliovirus receptor-rel 99.7 4.2E-17 1.5E-21 127.8 11.9 164 60-223 13-215 (225)
231 1sy6_A T-cell surface glycopro 99.7 2E-18 7E-23 134.3 4.2 147 60-214 15-192 (204)
232 1nbq_A JAM, junctional adhesio 99.7 1.1E-17 3.8E-22 130.0 8.1 134 133-280 4-152 (209)
233 3pv7_A B7-H6, IG-like domain-c 99.7 4.1E-17 1.4E-21 130.6 11.6 164 59-223 14-224 (248)
234 2gi7_A GPVI protein; IG-like d 99.7 3.4E-17 1.2E-21 125.2 10.5 129 130-279 5-135 (184)
235 3qp3_A Titin; I-SET IG-like, s 99.7 3.7E-16 1.3E-20 107.6 14.8 98 128-225 3-100 (103)
236 3sob_L Antibody light chain; b 99.7 1.6E-16 5.5E-21 126.0 14.6 140 133-279 24-180 (237)
237 2zg1_A Sialic acid-binding IG- 99.7 9.8E-17 3.3E-21 125.3 13.1 149 59-216 11-204 (214)
238 1q0x_L FAB 9B1, light chain; a 99.7 2.2E-16 7.6E-21 123.2 15.1 134 140-279 7-160 (212)
239 1gsm_A Madcam-1, mucosal addre 99.7 7.1E-16 2.4E-20 119.3 17.6 120 143-280 17-143 (210)
240 1mju_H Immunoglobulin MS6-12; 99.7 1.4E-16 4.7E-21 126.0 14.0 163 60-224 12-216 (227)
241 2fbj_H IGA-kappa J539 FAB (hea 99.7 5.8E-16 2E-20 121.7 17.0 156 59-216 11-212 (220)
242 1uct_A Immunoglobulin alpha FC 99.7 3.9E-17 1.3E-21 128.3 10.1 137 131-278 7-147 (218)
243 3eow_R Poliovirus receptor; im 99.7 2.9E-17 9.8E-22 129.2 9.3 162 60-222 11-209 (221)
244 1dee_B IGM RF 2A2; FAB-IBP com 99.7 1.4E-15 4.9E-20 119.8 18.8 159 59-218 11-220 (223)
245 3nl4_H Antigen binding fragmen 99.7 5.3E-17 1.8E-21 127.1 10.3 162 59-221 10-210 (215)
246 2if7_A SLAM family member 6; N 99.7 1.1E-16 3.6E-21 123.4 11.7 142 60-218 10-185 (193)
247 3qib_D 2B4 beta chain; IG doma 99.7 7.1E-17 2.4E-21 130.9 11.3 166 104-279 3-194 (270)
248 1f2q_A High affinity immunoglo 99.7 4E-17 1.4E-21 123.8 9.0 125 132-279 3-129 (176)
249 3bqu_C 3H6 FAB light chain; be 99.7 1E-17 3.6E-22 132.7 5.9 155 59-213 34-223 (233)
250 3fku_X Neutralizing antibody F 99.7 3.7E-16 1.3E-20 127.5 14.9 152 59-212 11-234 (280)
251 3bae_H WO2 IGG2A FAB fragment 99.7 3.7E-16 1.3E-20 123.5 14.2 160 59-219 11-220 (228)
252 3qib_D 2B4 beta chain; IG doma 99.7 5.6E-17 1.9E-21 131.5 9.3 188 16-214 6-244 (270)
253 4dzb_B Vbeta2 (MAIT T cell rec 99.7 3.1E-16 1E-20 125.3 13.5 156 59-214 12-220 (246)
254 1op3_H FAB 2G12, heavy chain; 99.7 2.1E-16 7E-21 124.8 12.2 156 59-216 11-216 (225)
255 1ugn_A LIR1, leukocyte immunog 99.7 1.8E-16 6E-21 122.5 11.4 135 132-278 4-141 (198)
256 3bkj_L WO2 IGG2A FAB fragment 99.7 4.3E-16 1.5E-20 125.0 14.1 140 133-279 34-195 (252)
257 4dzb_B Vbeta2 (MAIT T cell rec 99.7 3.9E-16 1.3E-20 124.7 13.6 140 136-279 4-170 (246)
258 1nfd_E H57 FAB; complex (immun 99.7 9.7E-17 3.3E-21 125.2 9.7 135 140-280 6-159 (212)
259 2pet_A Lutheran blood group gl 99.7 1.2E-16 4.1E-21 126.1 10.2 135 139-281 6-165 (231)
260 2cqv_A MLCK, myosin light chai 99.7 1.3E-15 4.5E-20 106.9 14.3 95 132-226 6-100 (114)
261 1c1e_H Catalytic antibody 1E9 99.7 4.8E-16 1.6E-20 122.0 13.3 133 139-277 6-167 (219)
262 1nkr_A P58-CL42 KIR; inhibitor 99.7 2.8E-16 9.4E-21 121.8 11.7 137 131-278 6-148 (201)
263 2xzc_L FAB A.17 light chain; i 99.7 3.4E-16 1.2E-20 122.5 12.4 134 140-280 7-160 (216)
264 3puc_A Titin; I-SET IG-like do 99.7 1.8E-15 6.1E-20 103.3 14.4 94 131-224 4-97 (99)
265 3liz_H 4C3 monoclonal antibody 99.7 9.1E-16 3.1E-20 123.3 14.8 164 59-223 11-218 (253)
266 1dn0_B IGM-kappa cold agglutin 99.7 7.3E-15 2.5E-19 116.4 19.6 165 59-224 11-226 (232)
267 1oll_A NK receptor; immune sys 99.7 8.9E-16 3E-20 117.6 13.8 135 132-278 3-139 (188)
268 1g1c_A Immunoglobulin-like dom 99.7 2.8E-15 9.4E-20 102.4 14.6 94 132-225 4-98 (99)
269 3m8o_H Immunoglobulin A1 heavy 99.7 4.6E-15 1.6E-19 116.5 18.0 149 59-215 11-213 (221)
270 1gsm_A Madcam-1, mucosal addre 99.7 2.9E-15 1E-19 115.8 16.1 150 59-213 18-193 (210)
271 3r4d_A CEA-related cell adhesi 99.7 9.5E-16 3.2E-20 119.0 13.4 129 139-280 5-153 (208)
272 3irg_B Obscurin-like protein 1 99.7 2.2E-15 7.6E-20 104.4 13.3 96 130-225 10-105 (107)
273 1hng_A CD2; T lymphocyte adhes 99.7 2.9E-16 9.8E-21 119.2 9.4 120 143-280 6-139 (176)
274 3ry4_A Low affinity immunoglob 99.7 4.3E-16 1.5E-20 117.2 10.2 124 133-279 4-129 (170)
275 3jz7_A MCAR, CAR, coxsackievir 99.7 3.3E-16 1.1E-20 122.0 9.6 125 140-274 7-160 (214)
276 2fbo_J V1V2;, variable region- 99.7 2.3E-16 7.7E-21 126.1 8.9 133 139-279 8-179 (250)
277 3bqu_C 3H6 FAB light chain; be 99.7 7.8E-17 2.7E-21 127.6 5.9 140 133-279 23-179 (233)
278 2ghw_B Anti-SARS SCFV antibody 99.7 1.5E-15 5E-20 121.4 13.3 138 140-277 9-178 (247)
279 2rgs_A I, IG gamma-2B heavy ch 99.7 3.5E-16 1.2E-20 122.8 9.1 140 132-278 8-161 (218)
280 1moe_A Anti-CEA MAB T84.66; an 99.6 2.2E-15 7.6E-20 119.8 13.6 134 136-273 4-158 (240)
281 4frw_A Poliovirus receptor-rel 99.6 2.6E-15 8.8E-20 116.9 13.5 131 139-278 5-160 (218)
282 3nfj_J T cell receptor beta ch 99.6 2.4E-15 8.2E-20 120.0 13.6 157 59-215 12-220 (245)
283 3q5y_A TCR N15 beta; IG, T cel 99.6 1.6E-15 5.5E-20 120.7 12.5 156 59-214 13-213 (240)
284 3sbw_C Programmed cell death 1 99.6 2.9E-15 9.9E-20 117.5 13.8 128 140-278 8-159 (222)
285 3omz_A Human vdelta1 gamma del 99.6 3.6E-16 1.2E-20 126.0 8.7 153 59-211 13-231 (259)
286 1c5d_H Monoclonal antibody aga 99.6 6.7E-15 2.3E-19 115.2 15.5 157 59-218 11-209 (215)
287 1wit_A Twitchin 18TH IGSF modu 99.6 2.4E-15 8.1E-20 101.6 11.1 89 133-223 2-92 (93)
288 1hnf_A CD2; T lymphocyte adhes 99.6 9.9E-16 3.4E-20 116.7 10.3 116 85-222 57-178 (182)
289 2if7_A SLAM family member 6; N 99.6 3.3E-15 1.1E-19 115.0 13.3 128 140-279 5-153 (193)
290 1waa_A Titin; metal binding pr 99.6 3.7E-15 1.3E-19 100.5 11.8 89 132-225 4-92 (93)
291 3b5h_A Cervical EMMPRIN, HAB18 99.6 2.1E-15 7.3E-20 114.8 12.1 110 143-272 8-120 (184)
292 2vol_A Murine IGG FC; FC, zinc 99.6 7E-16 2.4E-20 120.1 9.5 135 136-278 5-153 (207)
293 2x1w_L Vascular endothelial gr 99.6 3.6E-16 1.2E-20 122.3 7.8 126 140-277 14-148 (213)
294 2xqy_G A13-D6.3 monoclonal ant 99.6 4.1E-15 1.4E-19 120.0 14.1 155 60-216 18-216 (261)
295 1u2h_A APEG-1, aortic preferen 99.6 5.3E-15 1.8E-19 100.9 12.6 94 132-225 4-98 (99)
296 2vol_A Murine IGG FC; FC, zinc 99.6 6.3E-16 2.1E-20 120.4 8.9 154 60-213 15-196 (207)
297 2wqr_A IG epsilon chain C regi 99.6 2.5E-16 8.5E-21 131.0 7.0 192 19-214 85-309 (323)
298 3nfj_J T cell receptor beta ch 99.6 7.4E-15 2.5E-19 117.2 15.2 140 136-279 4-169 (245)
299 3auv_A SC-DSFV derived from th 99.6 4.5E-15 1.6E-19 120.7 14.2 141 133-273 12-173 (276)
300 3esu_F Antibody 14B7* light ch 99.6 2.8E-15 9.7E-20 119.9 12.8 139 135-273 6-170 (250)
301 2dru_A Chimera of CD48 antigen 99.6 7E-16 2.4E-20 117.4 8.7 139 59-220 10-176 (180)
302 1nqb_A Single-chain antibody f 99.6 3.6E-15 1.2E-19 120.0 13.3 129 139-277 6-169 (256)
303 2p1y_A Bispecific alpha/beta T 99.6 1.6E-15 5.3E-20 120.5 10.8 129 136-274 3-165 (238)
304 1fhg_A Telokin; immunoglobulin 99.6 1.2E-14 4.3E-19 107.6 14.9 101 125-225 33-134 (154)
305 1ccz_A Protein (CD58); LFA-3, 99.6 4.9E-16 1.7E-20 117.3 7.3 139 60-221 7-167 (171)
306 2kdg_A Myotilin; immonoglobuli 99.6 4.5E-15 1.5E-19 101.5 11.3 94 132-225 4-98 (100)
307 2yuz_A Myosin-binding protein 99.6 1.5E-15 5.1E-20 104.0 8.8 90 132-225 6-95 (100)
308 1q9r_B S25-2 FAB (IGG1K) heavy 99.6 3.4E-15 1.2E-19 117.4 12.0 132 140-277 7-170 (222)
309 3pv7_A B7-H6, IG-like domain-c 99.6 4.1E-15 1.4E-19 118.9 12.6 127 139-276 9-160 (248)
310 4f80_A Butyrophilin subfamily 99.6 1.8E-14 6.1E-19 113.5 16.1 122 141-274 12-157 (226)
311 2znx_A SCFV; fluorotryptohpan, 99.6 5.2E-15 1.8E-19 118.0 13.1 139 135-273 3-161 (242)
312 3irg_A Titin; IG-like, titin, 99.6 9.4E-15 3.2E-19 99.8 12.6 93 132-224 4-98 (100)
313 3d9a_H Heavy chain of hyhel10 99.6 1.8E-15 6.3E-20 117.8 10.1 131 140-277 7-161 (210)
314 3bn9_D E2 FAB heavy chain; ant 99.6 2.9E-15 9.8E-20 120.6 11.5 156 59-216 11-221 (257)
315 2bk8_A Connectin, M1, titin he 99.6 2.1E-14 7.3E-19 97.6 14.3 89 137-225 5-94 (97)
316 1dr9_A B7-1 (CD80), T lymphocy 99.6 2.5E-15 8.5E-20 116.2 10.8 126 142-279 3-150 (201)
317 2rgs_A I, IG gamma-2B heavy ch 99.6 5.2E-16 1.8E-20 121.9 6.7 155 60-214 23-205 (218)
318 4ei6_B Vbeta16 XV19 type II na 99.6 4.8E-15 1.6E-19 118.2 12.4 155 59-214 13-219 (245)
319 4ei6_B Vbeta16 XV19 type II na 99.6 7.2E-15 2.5E-19 117.2 13.3 140 135-279 4-169 (245)
320 1jbj_A CD3 epsilon and gamma e 99.6 7.4E-16 2.5E-20 117.9 6.8 121 144-278 10-146 (186)
321 2wbj_D OB TCR; transmembrane, 99.6 2.2E-14 7.5E-19 116.8 15.8 156 59-214 35-245 (279)
322 3pl6_D MBP peptide / T-cell re 99.6 3.6E-15 1.2E-19 120.7 11.0 155 59-214 37-241 (268)
323 1svz_A Immunoglobulin;, single 99.6 9.3E-15 3.2E-19 116.7 13.2 138 136-273 4-166 (247)
324 1f3r_B FV antibody fragment; I 99.6 2.3E-15 7.7E-20 121.2 9.7 138 140-277 7-182 (257)
325 1za6_B IGG heavy chain; immuno 99.6 4.7E-15 1.6E-19 124.4 12.0 133 139-277 6-163 (344)
326 1hxm_B Gamma-delta T-cell rece 99.6 6.4E-15 2.2E-19 117.5 12.1 161 59-222 12-226 (242)
327 1op3_H FAB 2G12, heavy chain; 99.6 9.7E-15 3.3E-19 115.1 12.9 132 140-277 7-171 (225)
328 2j6e_L IGM, FAB light chain; a 99.6 6.4E-16 2.2E-20 122.4 6.2 134 140-279 26-180 (234)
329 2e7c_A Myosin-binding protein 99.6 2.1E-14 7.1E-19 101.4 13.1 95 130-225 18-115 (118)
330 1qok_A MFE-23 recombinant anti 99.6 9E-15 3.1E-19 119.3 12.6 140 137-277 30-204 (282)
331 3pl6_D MBP peptide / T-cell re 99.6 5.9E-15 2E-19 119.4 11.3 140 135-279 28-191 (268)
332 1nct_A Titin; cell adhesion, g 99.6 2.9E-15 9.8E-20 103.8 8.0 94 131-224 12-105 (106)
333 3q5y_A TCR N15 beta; IG, T cel 99.6 1.6E-14 5.5E-19 114.9 13.4 139 136-279 5-167 (240)
334 1p6f_A NKP46, natural cytotoxi 99.6 2.1E-14 7E-19 114.5 13.9 136 131-278 5-142 (242)
335 1mju_H Immunoglobulin MS6-12; 99.6 1.9E-14 6.4E-19 113.6 13.5 133 139-277 6-164 (227)
336 3juy_B 3B3 single chain varian 99.6 1.5E-14 5E-19 116.3 13.0 141 132-272 5-186 (256)
337 3gkz_A Anti-methamphetamine si 99.6 3.6E-14 1.2E-18 114.0 15.3 140 134-273 9-179 (257)
338 2fbj_H IGA-kappa J539 FAB (hea 99.6 1.9E-14 6.6E-19 113.0 13.3 131 140-277 7-166 (220)
339 3omz_A Human vdelta1 gamma del 99.6 4.4E-15 1.5E-19 119.5 9.7 140 134-273 3-174 (259)
340 4acp_A IG gamma-1 chain C regi 99.6 1.3E-15 4.3E-20 121.3 6.3 161 110-278 1-174 (240)
341 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.6 1.4E-14 4.9E-19 116.4 12.6 137 135-272 5-172 (256)
342 1pz5_B Heavy chain of FAB (SYA 99.6 1.2E-14 4.3E-19 113.9 11.9 132 139-276 6-167 (220)
343 2kkq_A Myotilin; unknown funct 99.6 2.2E-14 7.5E-19 101.0 11.8 97 129-225 11-109 (116)
344 3tv3_H PGT128 heavy chain, IG 99.6 2.1E-14 7.2E-19 114.3 13.0 163 59-222 11-234 (239)
345 1dee_B IGM RF 2A2; FAB-IBP com 99.6 3.6E-14 1.2E-18 111.7 14.2 133 140-278 7-171 (223)
346 2eo9_A Roundabout homolog 1; b 99.6 5.5E-15 1.9E-19 104.4 8.5 111 131-252 6-117 (118)
347 2dm2_A Palladin; beta-sandwich 99.6 1.5E-14 5.2E-19 100.7 10.6 96 131-226 6-103 (110)
348 2wbj_D OB TCR; transmembrane, 99.6 1.8E-14 6.2E-19 117.3 12.6 143 133-279 24-195 (279)
349 1i1c_A IGG2A, IG gamma-2A chai 99.6 2.6E-15 8.9E-20 119.5 7.4 140 134-279 17-168 (239)
350 3umt_A SCFV heavy chain and li 99.6 2.6E-14 8.8E-19 114.8 13.3 135 139-273 8-175 (256)
351 3qhz_H Human monoclonal antibo 99.6 9.7E-14 3.3E-18 109.8 16.4 164 59-223 11-227 (232)
352 2yr3_A Myosin light chain kina 99.6 1.4E-14 4.9E-19 98.8 10.1 93 128-223 6-98 (99)
353 3uzq_A Anti-dengue MAB 4E11; d 99.6 1.5E-14 5E-19 116.1 11.8 137 137-273 5-174 (253)
354 3bae_H WO2 IGG2A FAB fragment 99.6 1.4E-14 4.9E-19 114.3 11.5 132 140-277 7-173 (228)
355 1b6u_A KIR2DL3, P58 killer cel 99.6 1.3E-14 4.3E-19 116.7 11.3 136 132-278 6-147 (257)
356 2zg1_A Sialic acid-binding IG- 99.6 1.9E-14 6.4E-19 112.2 11.7 130 138-277 5-168 (214)
357 2gjj_A A21 single-chain antibo 99.6 4.8E-14 1.7E-18 113.9 14.4 141 133-273 5-177 (264)
358 2lvc_A Obscurin-like protein 1 99.6 1.1E-14 3.7E-19 97.7 8.6 86 132-222 3-90 (91)
359 3mtr_A N-CAM-1, NCAM-1, neural 99.6 2.7E-13 9.3E-18 105.8 18.1 132 132-276 18-157 (215)
360 3nl4_H Antigen binding fragmen 99.6 2.3E-14 8E-19 112.0 11.9 133 139-277 5-163 (215)
361 1gxe_A Myosin binding protein 99.6 1.5E-14 5.1E-19 104.9 9.9 85 140-224 25-138 (139)
362 2w59_A IGY FCU3-4; immunoglobu 99.6 5.3E-15 1.8E-19 117.1 8.1 140 133-279 12-163 (231)
363 2lu7_A Obscurin-like protein 1 99.6 9.3E-15 3.2E-19 96.4 7.8 81 140-225 3-83 (84)
364 3ux9_B SCFV antibody; five hel 99.6 4E-14 1.4E-18 113.7 13.2 133 140-273 9-173 (256)
365 1hnf_A CD2; T lymphocyte adhes 99.6 7.5E-15 2.6E-19 111.8 8.4 119 141-277 7-141 (182)
366 2ny1_B T-cell surface glycopro 99.6 1.5E-15 5.1E-20 115.8 4.3 118 142-277 4-138 (184)
367 2xqy_G A13-D6.3 monoclonal ant 99.6 5.5E-14 1.9E-18 113.3 13.4 134 138-277 11-172 (261)
368 1c5d_H Monoclonal antibody aga 99.6 1.9E-14 6.4E-19 112.6 10.3 133 140-278 7-166 (215)
369 2ckn_A Basic fibroblast growth 99.5 3E-14 1E-18 96.5 9.4 87 132-223 8-94 (95)
370 1bec_A 14.3.D T cell antigen r 99.5 6.3E-14 2.2E-18 111.4 12.7 138 137-279 3-166 (238)
371 1x9q_A SCFV, 4M5.3 anti-fluore 99.5 4.9E-14 1.7E-18 114.1 12.1 140 133-273 15-190 (268)
372 1ccz_A Protein (CD58); LFA-3, 99.5 7.9E-15 2.7E-19 110.6 6.9 120 142-279 4-133 (171)
373 2dm3_A KIAA0992 protein, palla 99.5 2.1E-14 7.3E-19 99.9 8.6 96 131-226 7-103 (110)
374 1l6x_A Immunoglobulin gamma-1 99.5 3.3E-14 1.1E-18 110.6 10.3 127 146-278 16-153 (207)
375 1bec_A 14.3.D T cell antigen r 99.5 1.4E-13 4.8E-18 109.3 14.1 154 59-213 10-211 (238)
376 1dn0_B IGM-kappa cold agglutin 99.5 1.4E-13 4.6E-18 109.1 13.9 133 140-278 7-171 (232)
377 3mtr_A N-CAM-1, NCAM-1, neural 99.5 8.8E-15 3E-19 114.4 6.9 164 59-224 29-208 (215)
378 2edj_A Roundabout homolog 2; K 99.5 3.1E-14 1.1E-18 97.3 8.8 93 130-225 5-98 (100)
379 3kvq_A Vascular endothelial gr 99.5 1.7E-14 5.8E-19 100.0 7.5 96 128-225 5-100 (108)
380 3to4_D NKT vbeta2 (mouse varia 99.5 3.5E-14 1.2E-18 113.9 10.3 153 59-212 12-217 (253)
381 3u2s_H PG9 heavy chain; greek 99.5 3.9E-13 1.3E-17 107.5 16.4 160 59-224 10-237 (248)
382 1i1c_A IGG2A, IG gamma-2A chai 99.5 1.1E-14 3.7E-19 115.9 7.0 155 60-214 29-211 (239)
383 1hxm_B Gamma-delta T-cell rece 99.5 1.2E-13 4E-18 110.1 12.8 139 136-277 4-176 (242)
384 3bn9_D E2 FAB heavy chain; ant 99.5 4E-14 1.4E-18 113.9 10.1 132 140-277 7-176 (257)
385 1ypz_F T-cell receptor gamma c 99.5 9.6E-14 3.3E-18 109.8 11.8 154 59-214 12-216 (230)
386 3cx2_A Myosin-binding protein 99.5 1.5E-13 5E-18 95.4 11.3 92 133-224 4-107 (108)
387 3n9g_H FAB fragment of MAB CR4 99.5 9.5E-13 3.2E-17 104.0 17.3 162 60-224 12-224 (230)
388 2k1m_A Myosin-binding protein 99.5 1.2E-13 4.2E-18 93.4 10.4 87 133-224 8-94 (95)
389 2yuv_A Myosin-binding protein 99.5 1.7E-13 5.9E-18 93.6 11.1 89 132-225 6-95 (100)
390 2dlt_A Myosin binding protein 99.5 3.6E-14 1.2E-18 98.1 7.7 91 132-225 7-97 (106)
391 2dav_A SLOW MYBP-C, myosin-bin 99.5 1.3E-13 4.5E-18 97.4 10.6 92 134-225 8-111 (126)
392 3m8o_H Immunoglobulin A1 heavy 99.5 1.1E-13 3.8E-18 108.6 11.3 131 139-277 6-167 (221)
393 3o3u_N Maltose-binding peripla 99.5 1E-13 3.5E-18 124.3 12.4 151 59-214 377-566 (581)
394 2edh_A Obscurin; structural ge 99.5 3.6E-13 1.2E-17 94.1 12.6 94 126-225 11-105 (113)
395 2edf_A Obscurin; beta-sandwich 99.5 8.7E-14 3E-18 95.6 9.2 89 132-225 7-95 (103)
396 1wwb_X Protein (brain derived 99.5 1.7E-13 5.7E-18 94.2 10.4 80 146-225 14-98 (103)
397 3mj6_A Junctional adhesion mol 99.5 2.7E-14 9.2E-19 115.3 7.4 125 134-273 6-158 (268)
398 3to4_D NKT vbeta2 (mouse varia 99.5 3.3E-14 1.1E-18 114.1 7.9 137 138-279 6-169 (253)
399 2eny_A Obscurin; beta-sandwich 99.5 5.7E-14 1.9E-18 96.8 8.0 89 133-225 8-97 (104)
400 2dru_A Chimera of CD48 antigen 99.5 8.2E-14 2.8E-18 105.9 9.7 119 141-278 7-142 (180)
401 1sy6_A T-cell surface glycopro 99.5 3.1E-14 1.1E-18 110.5 7.3 119 145-279 15-154 (204)
402 1x44_A Myosin-binding protein 99.5 1.4E-13 4.8E-18 94.6 9.6 88 133-225 7-96 (103)
403 2cpc_A KIAA0657 protein; immun 99.5 3.6E-13 1.2E-17 94.1 11.9 91 130-225 7-100 (113)
404 1he7_A High affinity nerve gro 99.5 2.5E-13 8.6E-18 95.9 11.0 79 147-225 14-99 (126)
405 3eow_R Poliovirus receptor; im 99.5 1.1E-14 3.8E-19 114.3 4.3 124 141-275 7-156 (221)
406 2dm7_A KIAA1556 protein; beta- 99.5 1.6E-13 5.5E-18 95.1 9.8 89 131-225 6-94 (108)
407 2e6q_A Obscurin-like protein 1 99.5 3.7E-13 1.3E-17 93.4 11.4 89 132-225 7-105 (112)
408 1oga_E TRBC1, T-cell receptor 99.5 1.7E-13 5.9E-18 109.8 11.1 139 136-279 6-168 (252)
409 3o3u_N Maltose-binding peripla 99.5 1E-13 3.5E-18 124.3 10.5 126 143-280 376-517 (581)
410 3caf_A Fibroblast growth facto 99.5 7.3E-14 2.5E-18 95.4 7.4 83 141-223 16-99 (100)
411 4i0k_A CD276 antigen; immunogl 99.5 1.8E-14 6E-19 113.0 4.6 127 142-277 4-153 (222)
412 2cr6_A KIAA1556 protein, obscu 99.5 3.4E-14 1.2E-18 99.8 5.7 95 127-225 6-102 (115)
413 2e6p_A Obscurin-like protein 1 99.5 1.8E-13 6.3E-18 94.1 9.2 89 132-225 6-97 (104)
414 2w59_A IGY FCU3-4; immunoglobu 99.5 9E-14 3.1E-18 110.0 8.7 154 60-214 25-217 (231)
415 3iu4_H CHP3 FAB heavy chain; a 99.5 1.1E-12 3.6E-17 105.9 15.1 160 59-221 11-220 (263)
416 3liz_H 4C3 monoclonal antibody 99.5 5.5E-13 1.9E-17 106.9 13.4 132 139-276 6-166 (253)
417 1mq8_A ICAM-1, intercellular a 99.5 3E-13 1E-17 110.2 11.8 204 11-225 54-282 (291)
418 4fmk_A Poliovirus receptor-rel 99.5 2.9E-13 1E-17 105.7 11.3 127 141-277 9-163 (225)
419 1wwc_A Protein (NT-3 growth fa 99.5 4.9E-13 1.7E-17 94.2 11.3 95 128-225 3-101 (118)
420 2edk_A Myosin-binding protein 99.5 3.5E-14 1.2E-18 97.3 5.1 89 132-225 7-99 (101)
421 1oga_E TRBC1, T-cell receptor 99.5 3.2E-13 1.1E-17 108.2 11.3 155 59-214 14-218 (252)
422 2gki_A Nuclease; anti-DNA anti 99.5 2.3E-13 7.9E-18 111.5 10.7 135 139-273 28-202 (291)
423 1l6x_A Immunoglobulin gamma-1 99.5 9.9E-14 3.4E-18 107.8 7.8 153 61-213 16-196 (207)
424 1pd6_A Cardiac MYBP-C;, myosin 99.5 3.3E-13 1.1E-17 92.9 9.5 89 131-224 13-103 (104)
425 2aty_A Complement receptor chi 99.5 7.8E-13 2.7E-17 112.3 13.8 154 60-213 180-361 (376)
426 1ypz_E T cell receptor delta, 99.5 5.5E-13 1.9E-17 103.7 11.7 146 59-214 12-198 (207)
427 2edn_A Myosin-binding protein 99.5 1.9E-13 6.5E-18 95.5 7.9 93 133-225 12-116 (118)
428 3mlr_H Human monoclonal anti-H 99.5 2.9E-12 9.8E-17 101.0 15.6 153 59-219 11-220 (226)
429 2e7b_A Obscurin; IG-like domai 99.5 1.8E-13 6E-18 94.1 7.4 89 132-225 7-95 (103)
430 3bfo_A Mucosa-associated lymph 99.4 9.6E-13 3.3E-17 88.2 10.5 83 133-224 3-86 (91)
431 2cry_A KIN of IRRE-like protei 99.4 4.8E-14 1.6E-18 100.1 4.2 100 125-225 6-113 (122)
432 3sob_H Antibody heavy chain, l 99.4 4.3E-12 1.5E-16 101.9 15.9 163 59-224 34-250 (256)
433 2aty_A Complement receptor chi 99.4 6.1E-13 2.1E-17 113.0 11.4 136 137-278 171-318 (376)
434 2v9t_A Roundabout homolog 1; s 99.4 4.1E-13 1.4E-17 94.4 8.7 95 130-224 6-108 (117)
435 2xot_A Amphoterin-induced prot 99.4 3.4E-13 1.2E-17 113.9 9.7 104 140-269 253-360 (361)
436 1ypz_F T-cell receptor gamma c 99.4 3.6E-13 1.2E-17 106.5 9.2 141 137-278 5-175 (230)
437 2v5y_A Receptor-type tyrosine- 99.4 2.1E-12 7.3E-17 118.9 15.7 182 64-260 92-284 (731)
438 3shs_A HOC head outer capsid p 99.4 6.4E-12 2.2E-16 98.7 15.9 183 56-261 10-209 (304)
439 1iam_A ICAM-1, CD54, intercell 99.4 1.4E-12 4.7E-17 98.7 11.7 149 60-213 11-166 (185)
440 2dku_A KIAA1556 protein; beta- 99.4 9.1E-13 3.1E-17 90.4 9.7 90 132-226 7-96 (103)
441 3m45_A Cell adhesion molecule 99.4 2E-12 6.8E-17 89.3 10.7 93 132-225 5-106 (108)
442 3fku_X Neutralizing antibody F 99.4 7.8E-13 2.7E-17 107.7 9.4 132 140-272 7-177 (280)
443 2cr3_A Basic fibroblast growth 99.4 7.1E-13 2.4E-17 90.3 7.8 81 140-225 10-90 (99)
444 3so5_A LIG-3, leucine-rich rep 99.4 3.8E-12 1.3E-16 88.3 11.5 93 131-223 8-111 (112)
445 3s35_X Vascular endothelial gr 99.4 3.2E-12 1.1E-16 90.5 11.2 86 140-225 15-110 (122)
446 3u2s_H PG9 heavy chain; greek 99.4 4.5E-12 1.5E-16 101.3 12.6 133 138-276 4-183 (248)
447 3tv3_H PGT128 heavy chain, IG 99.4 5.3E-12 1.8E-16 100.3 12.5 133 139-277 6-183 (239)
448 3qhz_H Human monoclonal antibo 99.4 6.7E-12 2.3E-16 99.2 12.7 131 140-276 7-174 (232)
449 4acp_A IG gamma-1 chain C regi 99.4 1.2E-12 4.2E-17 103.9 8.0 153 60-212 36-216 (240)
450 1ow0_A IG alpha-1 chain C regi 99.4 7.2E-14 2.5E-18 109.2 0.8 135 136-279 7-152 (214)
451 1ow0_A IG alpha-1 chain C regi 99.4 2E-13 6.7E-18 106.7 3.1 153 60-213 16-199 (214)
452 3qr2_A Basigin; CD147, EMMPRIN 99.4 6.6E-12 2.3E-16 90.8 10.6 86 130-215 18-116 (137)
453 3rbg_A Cytotoxic and regulator 99.4 6.4E-12 2.2E-16 89.3 10.2 86 139-225 7-101 (124)
454 4hwu_A Fibroblast growth facto 99.3 4.9E-12 1.7E-16 85.4 9.0 81 139-225 7-87 (95)
455 1gl4_B Basement membrane-speci 99.3 5.3E-12 1.8E-16 85.7 8.8 81 139-224 16-97 (98)
456 3uto_A Twitchin; kinase, muscl 99.3 2.1E-11 7E-16 108.8 14.9 92 132-223 481-572 (573)
457 1ypz_E T cell receptor delta, 99.3 2.1E-11 7.1E-16 94.7 12.6 128 137-278 5-160 (207)
458 2ens_A Advanced glycosylation 99.3 1.1E-12 3.7E-17 88.8 4.6 82 131-221 8-89 (96)
459 2eo1_A OBSCN protein, cDNA FLJ 99.3 7.5E-12 2.6E-16 85.6 8.0 80 141-225 19-98 (102)
460 1z9m_A GAPA225; nectin-like, I 99.3 1.4E-11 4.7E-16 90.1 9.8 89 135-225 40-138 (145)
461 3u1s_H FAB PGT145 heavy chain; 99.3 6.7E-11 2.3E-15 95.5 13.7 160 60-222 35-262 (267)
462 3knb_B Obscurin-like protein 1 99.3 9.5E-12 3.2E-16 85.9 7.1 64 59-122 24-94 (107)
463 1iam_A ICAM-1, CD54, intercell 99.3 1.6E-10 5.6E-15 87.3 14.3 123 138-279 4-132 (185)
464 3n9g_H FAB fragment of MAB CR4 99.3 9.1E-11 3.1E-15 92.5 13.2 130 140-277 7-169 (230)
465 4f9p_D 103.2 anti-BTN3A1 antib 99.2 1.4E-10 4.6E-15 89.8 12.1 152 59-210 11-228 (254)
466 3shs_A HOC head outer capsid p 99.2 2.4E-10 8.3E-15 89.8 13.5 126 137-280 6-144 (304)
467 1hxm_A Gamma-delta T-cell rece 99.2 1.3E-10 4.5E-15 91.6 12.0 146 59-214 12-199 (229)
468 3iu4_H CHP3 FAB heavy chain; a 99.2 1E-10 3.4E-15 94.3 11.2 124 141-270 8-163 (263)
469 3mlr_H Human monoclonal anti-H 99.2 1.3E-10 4.5E-15 91.4 11.4 125 140-270 7-165 (226)
470 3bn3_B ICAM-5, intercellular a 99.2 1.1E-10 3.6E-15 89.0 9.6 154 59-213 13-174 (196)
471 3khq_A B-cell antigen receptor 99.2 1E-10 3.4E-15 84.1 9.0 89 135-225 19-117 (133)
472 3sob_H Antibody heavy chain, l 99.2 2.8E-10 9.4E-15 91.3 12.3 129 141-277 31-195 (256)
473 1hxm_A Gamma-delta T-cell rece 99.1 8.4E-10 2.9E-14 86.9 13.5 129 137-278 5-161 (229)
474 1waa_A Titin; metal binding pr 99.1 3.6E-10 1.2E-14 75.8 9.8 65 59-123 16-86 (93)
475 3f8u_B Tapasin; endoplasmic re 99.1 1.8E-09 6.1E-14 90.9 15.7 126 139-274 164-335 (401)
476 3bn3_B ICAM-5, intercellular a 99.1 2.2E-09 7.7E-14 81.7 13.9 128 136-280 5-136 (196)
477 1jhl_L IGG1-kappa D11.15 FV (l 99.1 4.3E-10 1.5E-14 77.6 9.1 77 136-212 4-94 (108)
478 3knb_A Titin; IG-like, titin, 99.1 3.5E-10 1.2E-14 77.0 7.4 65 59-123 16-89 (100)
479 2id5_A Lingo-1, leucine rich r 99.1 2E-10 6.8E-15 100.5 7.7 82 140-224 392-476 (477)
480 2lu7_A Obscurin-like protein 1 99.1 3.5E-10 1.2E-14 74.2 6.9 65 59-123 7-77 (84)
481 2v5y_A Receptor-type tyrosine- 99.1 1.8E-08 6.1E-13 92.8 20.6 197 19-224 137-353 (731)
482 1zxq_A ICAM-2, intercellular a 99.1 1.1E-09 3.9E-14 82.7 10.1 150 60-212 14-172 (192)
483 2edh_A Obscurin; structural ge 99.0 7.9E-10 2.7E-14 76.9 8.5 84 28-116 3-92 (113)
484 3c6l_A TCR 2W20 alpha chain; T 98.6 1.8E-11 6.2E-16 93.0 0.0 129 139-277 6-151 (185)
485 3u1s_H FAB PGT145 heavy chain; 99.0 1.3E-09 4.4E-14 87.9 10.7 129 141-277 31-209 (267)
486 1zxq_A ICAM-2, intercellular a 99.0 1.2E-08 4.3E-13 77.0 15.3 127 136-280 5-135 (192)
487 3f8u_B Tapasin; endoplasmic re 99.0 2.1E-09 7.1E-14 90.4 12.1 118 95-212 252-388 (401)
488 2cqv_A MLCK, myosin light chai 99.0 1.2E-09 4E-14 76.2 8.7 64 59-122 18-88 (114)
489 2yuz_A Myosin-binding protein 99.0 6.2E-10 2.1E-14 75.7 6.7 73 59-134 18-97 (100)
490 2q20_A VK1 O18/O8 germline lig 99.0 3.1E-09 1.1E-13 73.4 10.3 77 135-211 5-95 (109)
491 2lvc_A Obscurin-like protein 1 99.0 3.8E-10 1.3E-14 75.3 5.2 63 61-123 19-87 (91)
492 4f9l_D 20.1 anti-BTN3A1 antibo 99.0 2.3E-08 8E-13 77.8 15.7 150 60-209 13-230 (259)
493 3mbe_C I-AG7; T cell receptor, 99.0 2.3E-09 7.7E-14 83.8 10.0 133 137-280 5-156 (229)
494 2e27_L Anti-ciguatoxin antibod 99.0 2.1E-09 7.2E-14 75.5 8.8 77 135-211 5-95 (119)
495 2ywz_A NEW antigen receptor va 99.0 6.3E-09 2.1E-13 72.1 11.0 75 136-210 3-87 (111)
496 3zyj_A Leucine-rich repeat-con 99.0 1.2E-09 4E-14 94.7 8.7 90 133-226 341-434 (440)
497 2eny_A Obscurin; beta-sandwich 99.0 2.5E-09 8.5E-14 73.2 8.6 63 59-121 19-89 (104)
498 1i8k_A Epidermal growth factor 99.0 2.6E-09 8.9E-14 73.5 8.7 76 136-211 4-93 (107)
499 1xau_A B- and T-lymphocyte att 99.0 6.5E-09 2.2E-13 69.5 10.0 85 141-225 22-116 (122)
500 2dm7_A KIAA1556 protein; beta- 99.0 2.3E-09 7.8E-14 73.9 8.3 63 59-121 19-86 (108)
No 1
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=4.2e-34 Score=256.36 Aligned_cols=245 Identities=19% Similarity=0.291 Sum_probs=206.7
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-------EEeecCCCEEEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-------RKITATETTEMEH 92 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-------~~~~~~~~~~~~~ 92 (283)
.+.|.|+|..|..+....|.|..++.....+ .....+.+|+.+.|.|.+.|.|... ..+....++.+..
T Consensus 267 ~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~----~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~~~l~~~~~~~~~~ 342 (570)
T 3b43_A 267 QYTCYASNVAGKDSCSAQLGVQEPPRFIKKL----EPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSF 342 (570)
T ss_dssp EEEEEEEETTEEEEEEEEECCBCCCEEEECC----CSBCCEESSCEEEEEEEEESSSSCEEEEEETTEECCCSSSEEEEE
T ss_pred EEEEEEECCCCcEEEEEEEEeecCCcccccC----CCccEEcCCCcEEEEEEEeeCCCCEEEEeECCEECCCCCcEEEEE
Confidence 4789999999999999999988765322111 1112367788999999999998433 3444556677666
Q ss_pred cCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC
Q psy14060 93 KGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED 171 (283)
Q Consensus 93 ~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~ 171 (283)
......|.|.+++.+|+|.|+|.|.|..|. .....+.+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+|++
T Consensus 343 ~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~v~W~k~g 422 (570)
T 3b43_A 343 VESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDK 422 (570)
T ss_dssp ETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEECCCEECSCCCCEEECTTCCEEEEEEEESSSSCCCEEEETT
T ss_pred ECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecCCCeeecCCCceeecCCCEEEEEEEEecCCCCEEEEEECC
Confidence 667789999999999999999999999884 4455677778898888888888899999999999999999999999999
Q ss_pred EecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCC
Q psy14060 172 FPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVG 251 (283)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g 251 (283)
..+....++.+...+....|.|.++..+|+|.|+|.|.|..|.....+.|.|. .+|.|...+.+..+..|
T Consensus 423 ~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~~~l~v~----------~~P~~~~~~~~~~~~~g 492 (570)
T 3b43_A 423 RELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSDTCVGSITLK----------APPRFVKKLSDISTVVG 492 (570)
T ss_dssp EECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEC----------CCCEEEECCCCBCCBTT
T ss_pred EECcCCCCEEEEEcCCEEEEEECCCChhhCEEEEEEEEECCCeEEEEEEEEec----------cCCcccccCCCceecCC
Confidence 99988778888877777889999999999999999999999999888888887 48999988888889999
Q ss_pred CeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 252 QLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 252 ~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
+.+.|.|.+.|.|.|.+.|++||..+.
T Consensus 493 ~~~~l~c~~~g~p~~~v~W~k~~~~~~ 519 (570)
T 3b43_A 493 EEVQLQATIEGAEPISVAWFKDKGEIV 519 (570)
T ss_dssp CCEEEEEEEESCSSCCCEEEETTEECC
T ss_pred CeEEEEEEEecCCCCEEEEEeCCeEec
Confidence 999999999999999999999986553
No 2
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=100.00 E-value=7.9e-33 Score=248.11 Aligned_cols=248 Identities=21% Similarity=0.295 Sum_probs=205.4
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeec-CCeeeecCcEEEEEEEccCccce-------EEeecCCCEEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVH-GKEIHTAKSQQVQKEKKGDKEIV-------RKITATETTEME 91 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~-~~~v~~g~~v~l~C~~~g~~~i~-------~~~~~~~~~~~~ 91 (283)
.+.|.|+|..|..+....|.|.... ..|.+...+ ...+.+|+.++|.|.+.|.|... ..+....++.+.
T Consensus 171 ~Y~C~a~n~~g~~~~~~~l~v~~~~---~pp~~~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~k~g~~i~~~~~~~~~ 247 (570)
T 3b43_A 171 QYNCSASNPLGTASSSAKLTLSEHE---VPPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMT 247 (570)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCC---CCCEEEECCCCBCCBSBSCEEEEEEEESSSCCEEEEEETTEECCTTSSEEEE
T ss_pred EEEEEEEeCCcEEEEEEEEEEcCCC---CCCccccCCceeEecCCCeEEEEEEEEECCCCEEEEEECCEECcCCCcEEEE
Confidence 4789999999999888888886532 133333222 22367789999999999988433 344455667766
Q ss_pred EcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecCCc-eeecCCCcEEEEEEEeeecCCEEEEEe
Q psy14060 92 HKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQP-CRAFEQDQARFEVEFDGDPLPTIKWFR 169 (283)
Q Consensus 92 ~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~~~~~W~k 169 (283)
.......|.|.+++.+|+|.|+|.|.|..+. .....+.+..+|.+...... ..+..|+.+.|.|.+.|.|.+.+.|+|
T Consensus 248 ~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k 327 (570)
T 3b43_A 248 LVENTATLTVLKVTKGDAGQYTCYASNVAGKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYK 327 (570)
T ss_dssp EETTEEEEEESSBCGGGCEEEEEEEEETTEEEEEEEEECCBCCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEE
T ss_pred EECCEEEEEEcccCcccCEEEEEEEECCCCcEEEEEEEEeecCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeE
Confidence 6667789999999999999999999999884 44556777788888765543 457889999999999999999999999
Q ss_pred CCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEc
Q psy14060 170 EDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVIN 249 (283)
Q Consensus 170 ~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~ 249 (283)
++..+....++.+........|.|.++..+|+|.|+|.|.|..|.....+.|.|.. +|.+...+....+.
T Consensus 328 ~~~~l~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~----------~P~~~~~~~~~~~~ 397 (570)
T 3b43_A 328 DETEIQESSKFRMSFVESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKE----------PPVFRKKPHPVETL 397 (570)
T ss_dssp TTEECCCSSSEEEEEETTEEEEEEESCCGGGCEEEEEEEEBTTBCCEEEEEECEEC----------CCEECSCCCCEEEC
T ss_pred CCEECCCCCcEEEEEECCEEEEEECCCCcccCEEEEEEEEeCCCEEEEEEEEEecC----------CCeeecCCCceeec
Confidence 99999887777777777788899999999999999999999999999999999884 78888888888899
Q ss_pred CCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 250 VGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 250 ~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
+|+.+.|.|.+.|.|.|.+.|++||+.+...
T Consensus 398 ~G~~v~l~C~~~g~P~p~v~W~k~g~~l~~~ 428 (570)
T 3b43_A 398 KGADVHLECELQGTPPFQVSWHKDKRELRSG 428 (570)
T ss_dssp TTCCEEEEEEEESSSSCCCEEEETTEECCSS
T ss_pred CCCEEEEEEEEecCCCCEEEEEECCEECcCC
Confidence 9999999999999999999999999988654
No 3
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=100.00 E-value=1.1e-30 Score=213.94 Aligned_cols=222 Identities=22% Similarity=0.313 Sum_probs=183.1
Q ss_pred CCceeeecCC-eeeecCcEEEEEEEccCccce-------EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecc
Q psy14060 49 EPSASGVHGK-EIHTAKSQQVQKEKKGDKEIV-------RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYY 120 (283)
Q Consensus 49 ~p~~~~~~~~-~v~~g~~v~l~C~~~g~~~i~-------~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 120 (283)
+|.|...+.. .+.+|+.++|.|.+.|.|... ..+....++.+........|.|.+++.+|+|.|+|.+.|..
T Consensus 5 pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~ 84 (284)
T 2rik_A 5 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDNREIRPGGNYKMTLVENTATLTVLKVTKGDAGQYTCYASNVA 84 (284)
T ss_dssp CCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEESSCCGGGCEEEEEEEEETT
T ss_pred CCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEEecCCcccCEEEEEEEEECC
Confidence 4445443333 467789999999999987332 34445566777666678999999999999999999999988
Q ss_pred ee-eeeeccCCCCCCeEEecCC-ceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCC
Q psy14060 121 AL-SDLSEQKPAKPPVFTKKIQ-PCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFM 198 (283)
Q Consensus 121 ~~-~~~~~~~~~~~p~~~~~~~-~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 198 (283)
+. .....+.+..+|.+..... ...+..|+.+.|.|.+.+.|.+.+.|++++..+.....+.+........|.|.++..
T Consensus 85 g~~~~~~~l~V~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~ 164 (284)
T 2rik_A 85 GKDSCSAQLGVQEPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSFVESVAVLEMYNLSV 164 (284)
T ss_dssp EEEEEEEEEEEECCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEEETTEEEEEECSCCG
T ss_pred ceEEEEEEEEccCCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEEcCCEEEEEECCCCc
Confidence 74 3344566667787766544 456889999999999999999999999999999887777777777788999999999
Q ss_pred CCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 199 EDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
+|.|.|+|.+.|..|.....+.|.|.. +|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|..+.
T Consensus 165 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~ 234 (284)
T 2rik_A 165 EDSGDYTCEAHNAAGSASSSTSLKVKE----------PPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDKRELR 234 (284)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEEC----------CCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETTEEEC
T ss_pred ccCEEEEEEEEcCCCceeEEEEEEEec----------CCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECCEECc
Confidence 999999999999999988888888884 6777777777889999999999999999999999999999887
Q ss_pred CC
Q psy14060 279 VK 280 (283)
Q Consensus 279 ~~ 280 (283)
..
T Consensus 235 ~~ 236 (284)
T 2rik_A 235 SG 236 (284)
T ss_dssp BT
T ss_pred CC
Confidence 54
No 4
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.97 E-value=4.7e-29 Score=206.35 Aligned_cols=224 Identities=17% Similarity=0.147 Sum_probs=165.0
Q ss_pred CCceeeecCC-eeeecCcEEEEEEEccCccce-EEeec-----CCCEEEE--EcCCEEEEEEccCCC-CCCeEEEEEEEe
Q psy14060 49 EPSASGVHGK-EIHTAKSQQVQKEKKGDKEIV-RKITA-----TETTEME--HKGKIQERVVDASEL-DDDGYYAITERK 118 (283)
Q Consensus 49 ~p~~~~~~~~-~v~~g~~v~l~C~~~g~~~i~-~~~~~-----~~~~~~~--~~~~~~~L~i~~~~~-~D~G~Y~C~a~n 118 (283)
.|.|...+.. .+.+|+.+.|.|.+.|.|... .|... ..++... ..+....|.|.+++. +|+|.|+|.+.|
T Consensus 6 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g~~i~~~~~~~~~~~~~~~~~L~i~~~~~~~D~G~Y~C~a~n 85 (304)
T 2yd9_A 6 PPRFIKEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKGKKVNSQRFETIEFDESAGAVLRIQPLRTPRDENVYECVAQN 85 (304)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEC-------CTTEEEEEETTTTEEEEEECSCCTTTTCSEEEEEEEC
T ss_pred CCeeeecCCceEecCCCeEEEEEEEEEeCCCeEEEEECCEECCCCceEEEEecCCCceEEEEecccccCCCeEEEEEEEC
Confidence 4555543333 467888999999999988432 33222 2334433 233458899999998 999999999999
Q ss_pred ccee-eeeeccCCCC-------CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC-CeEEEEeCCEE
Q psy14060 119 YYAL-SDLSEQKPAK-------PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP-DFQIHTFSTKS 189 (283)
Q Consensus 119 ~~~~-~~~~~~~~~~-------~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~-~~~~~~~~~~~ 189 (283)
..+. .....+.+.. .|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.... ...+... ...
T Consensus 86 ~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~-~~~ 164 (304)
T 2yd9_A 86 SVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGRIKQL-RSG 164 (304)
T ss_dssp SSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTSEEEC-TTS
T ss_pred CCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcceEEeC-CCe
Confidence 8774 2222232222 2677777777889999999999999999999999999999876432 1112121 223
Q ss_pred EEEEcCCCCCCCEEEEEEEEeCCceeEEE-EEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCee
Q psy14060 190 ILIMRQVFMEDSGVFAVIAENRGGKAKCS-ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDV 268 (283)
Q Consensus 190 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v 268 (283)
.|.|.++..+|+|.|+|.+.|..|..... +.+.|.... .+|.+...+....+.+|+.+.|.|.+.|.|.|.+
T Consensus 165 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~-------~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v 237 (304)
T 2yd9_A 165 ALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQN-------VAPRFSILPMSHEIMPGGNVNITCVAVGSPMPYV 237 (304)
T ss_dssp CEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCC-------EEEEEEECCCCBCCCTTCCEEEEEEEEEESCCEE
T ss_pred EEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeec-------cCCcEEecCCceEEcCCCeEEEEEEEeeeCCCEE
Confidence 69999999999999999999999876643 556654311 3677877777778999999999999999999999
Q ss_pred EEeeCCEEecCC
Q psy14060 269 YWLKVSSLSDVK 280 (283)
Q Consensus 269 ~W~~~g~~l~~~ 280 (283)
.|++||..+...
T Consensus 238 ~W~~~~~~l~~~ 249 (304)
T 2yd9_A 238 KWMQGAEDLTPE 249 (304)
T ss_dssp EEEETTEECSCS
T ss_pred EEEECCEECCCc
Confidence 999999998654
No 5
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.97 E-value=1.2e-28 Score=210.53 Aligned_cols=242 Identities=16% Similarity=0.171 Sum_probs=172.2
Q ss_pred cceEEEEEcCCeee-eeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEcc-Cccce-EEee------cCCCEE
Q psy14060 19 ILKSRTASSDRSGV-STEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKG-DKEIV-RKIT------ATETTE 89 (283)
Q Consensus 19 ~~~~~~a~n~~g~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g-~~~i~-~~~~------~~~~~~ 89 (283)
=.+.|+|+|..|.. +....+.+...+.....+. ....+.+|+.+.|.|.... .+.+. .|+. ...+..
T Consensus 76 G~Y~C~A~N~~G~~~s~~~~l~v~~~~~~~~~~~----~~~~v~~G~~~~l~C~~~~~~~~~~~~W~~~~~~~~~~~~~~ 151 (384)
T 3kld_A 76 GTYQCIATNSFGTIVSREAKLQFAYLENFKTRTR----STVSVRRGQGMVLLCGPPPHSGELSYAWIFNEYPSYQDNRRF 151 (384)
T ss_dssp EEEEEEEEETTEEEECCCEEEEEEEECCCSCCCC----CCEEEEETCCEEECCCCCSEESCEEEEEEETTEECCCSSSEE
T ss_pred EEEEEEEEcCcccEEecceEEEEecccccccCCC----CceeEEcCCCeEEecCCCCCCCCeEEEEEECCCCCEeeccEE
Confidence 36789999999986 4455666655433222221 1124778899999997642 23222 3322 122222
Q ss_pred EEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeeee----c-------cCCCCCCeEE-ecCCceeecCCCcEEEEEEE
Q psy14060 90 MEHKGKIQERVVDASELDDDGYYAITERKYYALSDLS----E-------QKPAKPPVFT-KKIQPCRAFEQDQARFEVEF 157 (283)
Q Consensus 90 ~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~----~-------~~~~~~p~~~-~~~~~~~~~~g~~v~l~C~~ 157 (283)
+.. ....|.|.+++.+|+|.|+|.+.|..+..... . +....+|.+. ..+....+..|+.+.|.|.+
T Consensus 152 ~~~--~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~ 229 (384)
T 3kld_A 152 VSQ--ETGNLYIAKVEKSDVGNYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFA 229 (384)
T ss_dssp ECT--TTCCEEESSCCGGGCEEEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEE
T ss_pred EEc--CCCcEEEeecCHHHCceEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEE
Confidence 221 23469999999999999999999986532110 0 1111233333 23455678899999999999
Q ss_pred eeecCCEEEEEeCCE-ecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCC
Q psy14060 158 DGDPLPTIKWFREDF-PITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVP 236 (283)
Q Consensus 158 ~g~p~~~~~W~k~~~-~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~ 236 (283)
.|.|.|.+.|++++. .+.... .. ......|.|.++..+|+|.|+|.|.|..|.......|.|.. +
T Consensus 230 ~g~P~p~i~W~k~~~~~~~~~~--~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~----------~ 295 (384)
T 3kld_A 230 LGNPVPTILWRRADGKPIARKA--RR--HKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYA----------Q 295 (384)
T ss_dssp EEESCCEEEEEETTCCCCCTTC--EE--CTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----------E
T ss_pred eecCCCcEEEEeCCCccccccc--ee--cCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEec----------C
Confidence 999999999999544 443321 11 12344799999999999999999999999998889998885 6
Q ss_pred CeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 237 PSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 237 p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
|.+...+.+..+..|+.+.|.|.+.|.|.|.|+|++||+++...
T Consensus 296 P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~g~~l~~~ 339 (384)
T 3kld_A 296 PNWVQIINDIHVAMEESVFWECKANGRPKPTYRWLKNGDPLLTR 339 (384)
T ss_dssp EEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEECCCB
T ss_pred CccccCCCceEecCCCCEEEEeECCccCCCeEEEEECCEECCCC
Confidence 78888888889999999999999999999999999999998653
No 6
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.96 E-value=4.5e-28 Score=207.83 Aligned_cols=241 Identities=19% Similarity=0.197 Sum_probs=177.2
Q ss_pred ceEEEEEcCCeee--eeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-EEeecC---------CC
Q psy14060 20 LKSRTASSDRSGV--STEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITAT---------ET 87 (283)
Q Consensus 20 ~~~~~a~n~~g~~--~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~~---------~~ 87 (283)
.+.|.|.|..+.. +....+.|..++.....+. ...+.+|+.+.|.|.+.|.|... .|...+ .+
T Consensus 96 ~Y~C~~~~~~~~~~~s~~~~l~v~~p~~~~~~~~-----~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~ 170 (403)
T 3laf_A 96 LYQCEASLGDSGSIISRTAKVMVAGPLRFLSQTE-----SITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSR 170 (403)
T ss_dssp EEEEEEECGGGCEEECCCEEEEECCCCEECSCCC-----CEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCS
T ss_pred EEEEEEEeCCCccEEEEEEEEEecCCCccccCCC-----cEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceE
Confidence 4678898754433 4556677766443222221 12467788999999999888433 333222 22
Q ss_pred EEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee--eeeccCCCCC------CeEEecCCceeecCCCcEEEEEEEee
Q psy14060 88 TEMEHKGKIQERVVDASELDDDGYYAITERKYYALS--DLSEQKPAKP------PVFTKKIQPCRAFEQDQARFEVEFDG 159 (283)
Q Consensus 88 ~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~--~~~~~~~~~~------p~~~~~~~~~~~~~g~~v~l~C~~~g 159 (283)
.... ....|.|.+++.+|+|.|+|.+.|..+.. ....+.+..+ +.+...+....+..|+.+.|.|.+.+
T Consensus 171 ~~~~---~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~ 247 (403)
T 3laf_A 171 VVVL---PSGALQISRLQPGDSGVYRCSARNPASTRTGNEAEVRILSDPGLHRQLYFLQRPSNVIAIEGKDAVLECCVSG 247 (403)
T ss_dssp EEEC---TTSCEEECSCCGGGCEEEEEEEECSSCCCBCCCEEEEEECCCCCCEEEEEEECCCCEEEETTSCEEECCEEEE
T ss_pred EEEc---CCceEEEcccccccCEEEEEEEEcCCCceeccceeEEEecCCCcccCceEecCCCceEecCCCcEEEEEEcCC
Confidence 2222 23479999999999999999999976532 1122222222 23445566778889999999999999
Q ss_pred ecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeE
Q psy14060 160 DPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSF 239 (283)
Q Consensus 160 ~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~ 239 (283)
.|.+.+.|++++..+........... ...|.|.++..+|.|.|+|.+.|..|.....+.|.|.. +|.+
T Consensus 248 ~p~~~~~W~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p~~ 315 (403)
T 3laf_A 248 YPPPSFTWLRGEEVIQLRSKKYSLLG--GSNLLISNVTDDDSGTYTCVVTYKNENISASAELTVLV----------PPWF 315 (403)
T ss_dssp ESCCEEEEEETTEECCCSSSSEEEET--TTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----------EEEE
T ss_pred CCCCeEEEEECCeeccCCCceEEECC--ccEEEEeCCCHHHCEEEEEEEEcCCCceEEEEEEEEEC----------CCcE
Confidence 99999999999998865433222222 23699999999999999999999999988889999885 6888
Q ss_pred EecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 240 LTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 240 ~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
...+....+.+|+.+.|.|.+.|.|.|.+.|++||..+...
T Consensus 316 ~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~~~~~ 356 (403)
T 3laf_A 316 LNHPSNLYAYESMDIEFECAVSGKPVPTVNWMKNGDVVIPS 356 (403)
T ss_dssp EECCCCEECCTTCCEEECCEEEEESCCEEEEEETTEECCCS
T ss_pred eecCcceEEecCCeEEEEEEEeeccCCEEEEEECCEECCCC
Confidence 88888888999999999999999999999999999987543
No 7
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.96 E-value=2e-27 Score=195.00 Aligned_cols=211 Identities=16% Similarity=0.185 Sum_probs=159.8
Q ss_pred eeeecCcEEEEEEEccCc-cce-EEee-c-------CCCEEEE-EcCCEEEEEEccCCCCCCeEEEEEEEeccee--eee
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EIV-RKIT-A-------TETTEME-HKGKIQERVVDASELDDDGYYAITERKYYAL--SDL 125 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i~-~~~~-~-------~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~--~~~ 125 (283)
.+.+|+.+.|.|.+.|.+ ... .|.. . ..++.+. ..+....|.|.+++.+|+|.|+|.+.|..+. ...
T Consensus 13 ~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~ 92 (291)
T 1qz1_A 13 EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEAT 92 (291)
T ss_dssp EEETTCCEEEEEEESSCCSCCEEEEECTTSCBCCSSCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEE
T ss_pred eEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECccCCceEEEEEcCCCeEEEEEecCCCCCCEEEEEEEEcCCCCeeEEE
Confidence 477899999999999976 232 4433 1 2233332 2346789999999999999999999998752 334
Q ss_pred eccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEE
Q psy14060 126 SEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFA 205 (283)
Q Consensus 126 ~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 205 (283)
..+.+..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+........... ....|.|.++..+|.|.|+
T Consensus 93 ~~l~v~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~-~~~~L~i~~~~~~d~G~Y~ 171 (291)
T 1qz1_A 93 VNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVL-SNNYLQIRGIKKTDEGTYR 171 (291)
T ss_dssp EEEEEECCSEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEEEC-TTSCEEETTCCGGGCEEEE
T ss_pred EEEEeeccccccCCCCcccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEEEc-cCCcEEEccCccccCeEEE
Confidence 455566688888888888899999999999999999999999999988754322222211 1235999999999999999
Q ss_pred EEEEeCCceeE--EEEEEEEEeccCCCCCCCCCCeEEecCC--ceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 206 VIAENRGGKAK--CSANLVVEEKRQGGRGGVVPPSFLTTIS--SAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 206 C~a~n~~g~~~--~~~~l~v~~~~~~~~~~~~~p~~~~~~~--~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
|.+.|..+... ....+.|.. +|.+..... ...+..|+.+.|.|.+.|.|.|.+.|+++|+.+...
T Consensus 172 C~a~n~~~~~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~g~~~~~~ 240 (291)
T 1qz1_A 172 CEGRILARGEINFKDIQVIVNV----------PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENE 240 (291)
T ss_dssp EEEEEGGGTEEEEEEEEEEEEE----------EEEEEESCSEEEEETTSCCCEEEEEEEEEESCCEEEEEETTEECCCC
T ss_pred EEEEecCCCceeeEEEEEEEec----------CCcccccccccccccccCceEEEEEEEEEeCCCcEEEEECCEECcCC
Confidence 99999764433 345566653 566655433 446789999999999999999999999999988754
No 8
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.96 E-value=5.2e-28 Score=207.45 Aligned_cols=241 Identities=15% Similarity=0.160 Sum_probs=179.1
Q ss_pred ceEEEEEcCCeee-eeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEE-ccCccce-EEeec-------CCCEE
Q psy14060 20 LKSRTASSDRSGV-STEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEK-KGDKEIV-RKITA-------TETTE 89 (283)
Q Consensus 20 ~~~~~a~n~~g~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~-~g~~~i~-~~~~~-------~~~~~ 89 (283)
.+.|.|.|..|.. +....|.|...+.....+. ....+.+|+.+.|.|.+ .|.|... .|... ..++.
T Consensus 91 ~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~----~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 166 (404)
T 3p3y_A 91 EYQCFARNKFGTALSNRIRLQVSKSPLWPKENL----DPVVVQEGAPLTLQCNPPPGLPSPVIFWMSSSMEPITQDKRVS 166 (404)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCCCCCCCCC----CCEEEETTSCEEECCCCCCCSSCCEEEEECTTSCBCCCCSSEE
T ss_pred EEEEEEEcCCCeEeeeeEEEEEeccCccccCCC----CCeEEccCCcEEEEeCCCCCCCCCeEEEeCCCccccCCCCcEE
Confidence 4789999999987 4678888887654322211 11247778899999999 6777332 33322 23333
Q ss_pred EEEcCCEEEEEEccCCCCC-CeEEEEEEEecceeee----eeccC-------CCCCCeEEecC---CceeecCCCcEEEE
Q psy14060 90 MEHKGKIQERVVDASELDD-DGYYAITERKYYALSD----LSEQK-------PAKPPVFTKKI---QPCRAFEQDQARFE 154 (283)
Q Consensus 90 ~~~~~~~~~L~i~~~~~~D-~G~Y~C~a~n~~~~~~----~~~~~-------~~~~p~~~~~~---~~~~~~~g~~v~l~ 154 (283)
.. ....|.|.+++.+| +|.|+|.+.|..+... ...+. ...+|.+.... ....+..|+.+.|.
T Consensus 167 ~~---~~~~l~i~~v~~~d~~G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~ 243 (404)
T 3p3y_A 167 QG---HNGDLYFSNVMLQDMQTDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLE 243 (404)
T ss_dssp EC---TTSCEEESSCCSGGGSSCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEE
T ss_pred Ec---CCCcEEEEeeeeccCCcceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEE
Confidence 32 23368999999999 5999999998765211 11111 12234443322 23568899999999
Q ss_pred EEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCC
Q psy14060 155 VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGV 234 (283)
Q Consensus 155 C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~ 234 (283)
|.+.+.|.+.+.|++++..+..... .. ......|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 244 C~~~g~p~~~v~W~~~~~~~~~~~~-~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~--------- 311 (404)
T 3p3y_A 244 CIASGVPTPDIAWYKKGGDLPSDKA-KF--ENFNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKA--------- 311 (404)
T ss_dssp CCBCCSSCCEEEEEETTBCCCTTTE-EE--EGGGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE---------
T ss_pred EEECCCCCCcEEEEECCEECCCCcc-cc--cccCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeC---------
Confidence 9999999999999999998765432 22 12234799999999999999999999999988888888885
Q ss_pred CCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 235 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 235 ~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++||..+...
T Consensus 312 -~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 356 (404)
T 3p3y_A 312 -APYWLDEPKNLILAPGEDGRLVCRANGNPKPTVQWMVNGEPLQSA 356 (404)
T ss_dssp -EEEEEECCCCEEECTTCCEEEECEEEEESCCEEEEEETTEEGGGS
T ss_pred -CCeeeccCCcceeecCCcEEEEEEccccCCCceEEEECCEecCCC
Confidence 678888888889999999999999999999999999999998754
No 9
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.96 E-value=3.6e-28 Score=199.49 Aligned_cols=209 Identities=15% Similarity=0.273 Sum_probs=157.2
Q ss_pred eeeecCcEEEEEEEccCcc-ce------EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee--eeeccC
Q psy14060 59 EIHTAKSQQVQKEKKGDKE-IV------RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALS--DLSEQK 129 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~-i~------~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~--~~~~~~ 129 (283)
.+.+|+.+.|.|.+.|.|. +. ..+....++.+...+....|.|.+++.+|+|.|+|.+.|..+.. ....+.
T Consensus 15 ~v~~G~~v~l~C~~~~~p~~v~W~~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~~~n~~g~~~~~~~~l~ 94 (291)
T 2wim_A 15 ELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLE 94 (291)
T ss_dssp EEETTCCEEEEEEEESCCSEEECBCTTCCBCCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSSCEEEEEEEEE
T ss_pred EecCCCcEEEEEEEeCCCCceEEECCCCcCccCCCcEEEecCCCEEEEEEccCCcccCEEEEEEEecccCceEEEEEEEE
Confidence 4778899999999999883 32 12233456777767778899999999999999999999987642 333455
Q ss_pred CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC--CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEE
Q psy14060 130 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS--SPDFQIHTFSTKSILIMRQVFMEDSGVFAVI 207 (283)
Q Consensus 130 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 207 (283)
+..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+.. ...|.|.++..+|.|.|+|.
T Consensus 95 v~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~ 171 (291)
T 2wim_A 95 IYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA---NNNLQILNINKSDEGIYRCE 171 (291)
T ss_dssp EECCCBCCSCCCSEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEEECT---TSCEEETTCCGGGCEEEEEE
T ss_pred ecCCcceEeCCCChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEEEcc---CCCEEEEecchhhCEEEEEE
Confidence 55677776667778899999999999999999999999999987764 22333322 23599999999999999999
Q ss_pred EEeCCceeE--EEEEEEEEeccCCCCCCCCCCeEEecCC--ceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 208 AENRGGKAK--CSANLVVEEKRQGGRGGVVPPSFLTTIS--SAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 208 a~n~~g~~~--~~~~l~v~~~~~~~~~~~~~p~~~~~~~--~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
+.|..+... ....+.+.. +|.+..... ...+.+|+.+.|.|.+.|.|.|.+.|++||+.+...
T Consensus 172 ~~n~~~~~~~~~~~~~~v~~----------~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 238 (291)
T 2wim_A 172 GRVEARGEIDFRDIIVIVNV----------PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN 238 (291)
T ss_dssp EEETTTTEEEEEEEEEEEEB----------CCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCEEEEEETTEECCCT
T ss_pred EEECCCCeeEEeeEEEEecc----------CCccccCcccccceecCCCeEEEEEEeecCCCCeEEEEECCEECcCC
Confidence 999875433 334555553 555544433 345789999999999999999999999999988654
No 10
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.96 E-value=5.7e-28 Score=214.43 Aligned_cols=240 Identities=11% Similarity=0.108 Sum_probs=170.7
Q ss_pred ceEEEEEcCCeee-eeeeEEEEeCCCCCCCCCceeeecC-CeeeecCcEEEEEEEccCcc-c-eEEeecCCC--------
Q psy14060 20 LKSRTASSDRSGV-STEETKIIDGRKVSVPEPSASGVHG-KEIHTAKSQQVQKEKKGDKE-I-VRKITATET-------- 87 (283)
Q Consensus 20 ~~~~~a~n~~g~~-~~~~~l~v~~~~~~~~~p~~~~~~~-~~v~~g~~v~l~C~~~g~~~-i-~~~~~~~~~-------- 87 (283)
.+.|.|.|..|.. +....|.|...+ ...|.+..... ..+.+|+.+.|.|.+.|.|. . ..|...+..
T Consensus 183 ~Y~C~a~n~~~~~~s~~~~l~V~~~~--~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~ 260 (524)
T 2ec8_A 183 CLHCSVDQEGKSVLSEKFILKVRPAF--KAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYN 260 (524)
T ss_dssp EEEEEEC----CCCCCCEECCEECCC--CSCCEEECSCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEE
T ss_pred eEEEEEEECCceEEEEEEEEEEEeCC--CCCCcEEecCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccc
Confidence 6889999987766 446777776321 11233332211 14778899999999999883 3 244443333
Q ss_pred EEEE---EcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecC---CceeecCCCcEEEEEEEeee
Q psy14060 88 TEME---HKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKI---QPCRAFEQDQARFEVEFDGD 160 (283)
Q Consensus 88 ~~~~---~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~---~~~~~~~g~~v~l~C~~~g~ 160 (283)
..+. .......|.|.+++.+|+|.|+|.+.|..+. .....+.+..+|.+...+ ....+..|+.+.|.|.+.|.
T Consensus 261 ~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C~~~g~ 340 (524)
T 2ec8_A 261 SWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVDKGFINIFPMINTTVFVNDGENVDLIVEYEAF 340 (524)
T ss_dssp EEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEESSCEEEEEESSCSEEEECTTCCEEEEEEEEEE
T ss_pred cccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEeccCceEeecCCCceEEEcCCCcEEEEEEEeec
Confidence 1111 0123678999999999999999999998874 334455666677776544 35789999999999999999
Q ss_pred cCCE-EEEEeCCEecCCCC-CeEEEEeC----CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCC
Q psy14060 161 PLPT-IKWFREDFPITSSP-DFQIHTFS----TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGV 234 (283)
Q Consensus 161 p~~~-~~W~k~~~~~~~~~-~~~~~~~~----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~ 234 (283)
|.|. +.|++++..+.... ++...... ....|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 341 P~p~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~--------- 411 (524)
T 2ec8_A 341 PKPEHQQWIYMNRTFTDKWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTFLVSNSDVNAAIAFNVYVNT--------- 411 (524)
T ss_dssp SCCCEEEEESSSCBCSSSBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEECE---------
T ss_pred CCCcEEEEEECCeeccCCccceeEEccCCCceeEEEEEEeecCcccCeEEEEEEEecCceEEEEEEEEEec---------
Confidence 9998 99999999887654 33222211 246899999999999999999999999988888888874
Q ss_pred CCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEe
Q psy14060 235 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLS 277 (283)
Q Consensus 235 ~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l 277 (283)
+|.+...+. +.+| .|.|.+.|.|.|.|+|+++|..+
T Consensus 412 -~P~i~~~~~---~~~g---~l~C~~~g~P~p~i~W~~~~~~~ 447 (524)
T 2ec8_A 412 -KPEILTYDR---LVNG---MLQCVAAGFPEPTIDWYFCPGTE 447 (524)
T ss_dssp -EEEEEEEEC---CSSS---CEEEEEEEESCCEEECCCC----
T ss_pred -CCeEeeccc---CcCc---EEEEEEEeecCCEEEEEECCCcc
Confidence 677766543 3456 99999999999999999998665
No 11
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.96 E-value=1e-27 Score=207.15 Aligned_cols=240 Identities=9% Similarity=-0.032 Sum_probs=158.8
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-EEeecCCCEEEE-EcCCEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITATETTEME-HKGKIQ 97 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~~~~~~~~-~~~~~~ 97 (283)
.+.|.|+|..|..+..+.|.|..++... +..+. .+..|+.+.|.|.+.|.|... .|.......... ......
T Consensus 117 ~Y~C~a~N~~g~~~~~~~l~V~~~p~~~--~~~p~----~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~ 190 (423)
T 3qs7_E 117 EYLLFIQSEATNYTILFTVSIRNTLLYT--LRRPY----FRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAV 190 (423)
T ss_dssp EEEEEEEC--CEEEEEEEEEEC-----C--EEEEE----EEECSSSSCEEEEEEESSCCEEEEEEC-------------C
T ss_pred EEEEEEEcCCCcEEEEEEEEEecCcccc--ccCCc----EeccCCceEEEEEEeeecCCeEEEEECCCCCcccccccccc
Confidence 4689999999999999999998654321 11111 133466788999999999433 444322211000 000000
Q ss_pred EEEEcc-CCCCCCeEEEEEEEecceeee--eeccCCCCCCeEEecCCceeecCCCcEEEEEEEee-ecCCEEEEEeCCEe
Q psy14060 98 ERVVDA-SELDDDGYYAITERKYYALSD--LSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLPTIKWFREDFP 173 (283)
Q Consensus 98 ~L~i~~-~~~~D~G~Y~C~a~n~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~~~W~k~~~~ 173 (283)
.+.... ....|+|.|+|.|.|..|... ...+.+..+|.+ .+....+.+|+.+.|.|.+.| .|.+.+.|+|++..
T Consensus 191 ~~~~~~~l~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~ 268 (423)
T 3qs7_E 191 VKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKA 268 (423)
T ss_dssp EEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSB
T ss_pred ccccceEEecccCeEEEEEEEcCCCCcceeeEEEEEecCCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEE
Confidence 011111 157899999999999988432 234445444443 345678899999999999998 57799999999987
Q ss_pred cCCCCCeEEE-E-----eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecC--Cc
Q psy14060 174 ITSSPDFQIH-T-----FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI--SS 245 (283)
Q Consensus 174 ~~~~~~~~~~-~-----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~--~~ 245 (283)
+.....+... . ......|.|.++..+|+|.|+|.|.|. ....+.|.|.. +|.+...+ ..
T Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~---~~~~~~L~V~~----------~p~i~~~~~~~~ 335 (423)
T 3qs7_E 269 LEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVE----------KGFINATNSSED 335 (423)
T ss_dssp CCGGGEEEEEEEETTTEEEEEEEEEESSCCTTTCEEEEEEETTE---EEEEEEEEEES----------SCEEEEC---CE
T ss_pred ccccceeecccccCCceeEEEEEEEEeecCHHHCEEEEEEEecC---CCceEEEEEEe----------CCcceEcCCCcc
Confidence 7543222111 1 112346999999999999999999987 56667888874 55555433 34
Q ss_pred eEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 246 AVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 246 ~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
..+.+|+.+.|.|.+.|+|.|.|+|+|||+.|...
T Consensus 336 ~~v~~G~~v~l~C~~~g~P~p~i~W~k~g~~l~~~ 370 (423)
T 3qs7_E 336 YEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCE 370 (423)
T ss_dssp ECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECB
T ss_pred EEecCCCeEEEEEEEEEcCCCeEEEEECCEECCCc
Confidence 56789999999999999999999999999998554
No 12
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.96 E-value=1.9e-27 Score=202.72 Aligned_cols=239 Identities=19% Similarity=0.219 Sum_probs=174.5
Q ss_pred ceEEEEEcCCeee-eeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEc-cCccce-EEeecC--------CCE
Q psy14060 20 LKSRTASSDRSGV-STEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKK-GDKEIV-RKITAT--------ETT 88 (283)
Q Consensus 20 ~~~~~a~n~~g~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~-g~~~i~-~~~~~~--------~~~ 88 (283)
.+.|.|+|..|.. +....|.|...+.....+. ....+.+|+.+.|.|.+. +.|... .|.... .+.
T Consensus 76 ~Y~C~a~n~~g~~~s~~~~l~v~~~~~~~~~~~----~~~~v~~G~~v~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~~ 151 (382)
T 1cs6_A 76 SYQCVATNARGTVVSREASLRFGFLQEFSAEER----DPVKITEGWGVMFTCSPPPHYPALSYRWLLNEFPNFIPADGRR 151 (382)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEEECCCCSSCC----CCEEEETTSCEEECCCCCSEESCCEEEEEESSTTCBCCCCSSE
T ss_pred EEEEEEEcCCcEEEecceEEEeeccccccccCC----CceEEecCCcEEEEeCCCCCCCCcEEEEEECCCccccccCceE
Confidence 5789999999976 3356666665443222211 112467788999999864 445332 333322 222
Q ss_pred EEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee--ee----eecc------CCCCCCeEEec-CCceeecCCCcEEEEE
Q psy14060 89 EMEHKGKIQERVVDASELDDDGYYAITERKYYAL--SD----LSEQ------KPAKPPVFTKK-IQPCRAFEQDQARFEV 155 (283)
Q Consensus 89 ~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~--~~----~~~~------~~~~~p~~~~~-~~~~~~~~g~~v~l~C 155 (283)
... .....|.|.+++.+|+|.|+|.+.|..+. .. ...+ ....+|.+... +....+..|+.+.|.|
T Consensus 152 ~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C 229 (382)
T 1cs6_A 152 FVS--QTTGNLYIAKTEASDLGNYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLEC 229 (382)
T ss_dssp EEC--TTTCCEEESSCCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEEC
T ss_pred EEe--cCceEEEEEeeCcccCeeEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEE
Confidence 222 22357999999999999999999987631 11 1111 12224555443 4567889999999999
Q ss_pred EEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCC
Q psy14060 156 EFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVV 235 (283)
Q Consensus 156 ~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~ 235 (283)
.+.+.|.+.+.|++++..+.... ......|.|.++..+|.|.|+|.+.|..|.....+.|.|..
T Consensus 230 ~~~g~p~~~i~W~~~~~~~~~~~------~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~---------- 293 (382)
T 1cs6_A 230 FAFGNPVPQIKWRKLDGSQTSKW------LSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHA---------- 293 (382)
T ss_dssp EEEEESCCEEEEEECCSCCSCCC------SBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEE----------
T ss_pred EEccCCCCEEEEEECCcccccEE------ecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEec----------
Confidence 99999999999999887765311 12334699999999999999999999999988888888885
Q ss_pred CCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 236 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 236 ~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++||+.+...
T Consensus 294 ~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 338 (382)
T 1cs6_A 294 QPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQ 338 (382)
T ss_dssp EEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEETTEECCCC
T ss_pred CCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEECCEECCCC
Confidence 678888888889999999999999999999999999999998754
No 13
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.96 E-value=8e-28 Score=213.17 Aligned_cols=227 Identities=13% Similarity=0.048 Sum_probs=160.5
Q ss_pred ceEEEEEcCCeeeeee-eEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEc-cCccce-EEeecCC------CEEE
Q psy14060 20 LKSRTASSDRSGVSTE-ETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKK-GDKEIV-RKITATE------TTEM 90 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~-~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~-g~~~i~-~~~~~~~------~~~~ 90 (283)
.+.|.|+|..|..... +.|.|...+.. .|. ...+.+|+.+.|.|.+. |.|... .|...+. .+..
T Consensus 205 ~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~-----~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~l~~~~~~~~ 277 (527)
T 3qs9_E 205 DIRCCARNELGRECTRLFTIDLNQTPQT--TLP-----QLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEEGNYFEM 277 (527)
T ss_dssp CEEEEEECSSCEEEEECEEEESSSCCCC--SCC-----EEEECTTSCEEEEEEEEESSSCCCEEEECSSSCCCGGGEEEE
T ss_pred EEEEEEEeCCCcccceEEEEEEeccCcc--CCC-----ceEEeCCCeEEEEEEEccCCCCeEEEEEECCEECCCCceeee
Confidence 3889999999997655 77777766543 111 12366788999999996 777432 4443322 1111
Q ss_pred E--E----cCCEEEEEEccCCCCCCeEEEEEEEecceeeeeeccCCCCCCeEEecC--CceeecCCCcEEEEEEEeeecC
Q psy14060 91 E--H----KGKIQERVVDASELDDDGYYAITERKYYALSDLSEQKPAKPPVFTKKI--QPCRAFEQDQARFEVEFDGDPL 162 (283)
Q Consensus 91 ~--~----~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~p~~~~~~--~~~~~~~g~~v~l~C~~~g~p~ 162 (283)
. . ......|.|.+++.+|+|.|+|.|.|. ......+.+..+|.+...+ ....+..|+.+.|.|.+.|.|.
T Consensus 278 ~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~--~~~~~~L~V~~~p~i~~~~~~~~~~v~~G~~v~L~C~~~g~P~ 355 (527)
T 3qs9_E 278 STYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH--PSQSALVTIVEKGFINATNSSEDYEIDQYEEFCFSVRFKAYPQ 355 (527)
T ss_dssp EEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE--EEEEEEEEEC--CEEECCCSCCEECCCTTCCCCEEEEEEEESC
T ss_pred eeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC--CCceEEEEEEccCccccccCcccEEEcCCCeEEEEEEEEecCC
Confidence 0 0 012456999999999999999999988 3334445555566655433 3356788999999999999999
Q ss_pred CEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEec
Q psy14060 163 PTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTT 242 (283)
Q Consensus 163 ~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~ 242 (283)
|.+.|+|++..+....++. .....|.|.++..+|+|.|+|.|.|..|.....+.|.|. .+|.+...
T Consensus 356 p~i~W~k~g~~l~~~~~~~----~~~~~L~I~~v~~~D~G~YtC~A~N~~g~~~~~~~L~V~----------~~P~i~~~ 421 (527)
T 3qs9_E 356 IRCTWTFSRKSFPCEQKGL----DNGYSISKFCNHKHQPGEYIFHAENDDAQFTKMFTLNIR----------RKPQVLAE 421 (527)
T ss_dssp CEEEEEETTEEEECBCCBC----SSSSEEEEECCCTTCCSCEEEEEEETTEEEEEEEEEC------------CCCEEEEC
T ss_pred CEEEEEECCEECcCCcccc----cCCcEEEEecCCcccCEEEEEEEEeCCCcEEEEEEEEEe----------cCCeEEEe
Confidence 9999999999886544321 133469999999999999999999999999888888887 47887765
Q ss_pred CCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEe
Q psy14060 243 ISSAVINVGQLARFDAKISATKPLDVYWLKVSSLS 277 (283)
Q Consensus 243 ~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l 277 (283)
+. | ..|.|.+.|.|.|.|.|++++...
T Consensus 422 ~~------~--~~l~C~a~g~P~p~i~W~~~~~~~ 448 (527)
T 3qs9_E 422 AS------A--SQASCFSDGYPLPSWTWKKCSDKS 448 (527)
T ss_dssp CC------C--E---EEEECSSCCEEEEECCC---
T ss_pred CC------C--CEEEEEEEEEcCCeEEEEECCCCc
Confidence 42 2 357999999999999999876543
No 14
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.96 E-value=7.7e-27 Score=211.98 Aligned_cols=237 Identities=11% Similarity=0.059 Sum_probs=178.3
Q ss_pred ceEEEEEcCCeee-eeeeEEEEeCCCCC-CCCCceeeecCCeeeecCcEEEEEEEccCccce-EEeecCCCEEEEEcCCE
Q psy14060 20 LKSRTASSDRSGV-STEETKIIDGRKVS-VPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITATETTEMEHKGKI 96 (283)
Q Consensus 20 ~~~~~a~n~~g~~-~~~~~l~v~~~~~~-~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~~~~~~~~~~~~~ 96 (283)
.+.|.|.|..|.. +....|.|...+.. ...| ....+..|+.+.|.|.+.|.|... .|...+.. +. ..
T Consensus 356 ~Y~C~a~n~~g~~~s~~~~l~V~~~p~~~~~~~-----~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~--~~---~~ 425 (642)
T 1e07_A 356 PYECGIQNELSVDHSDPVILNVLYGPDDPTISP-----SYTYYRPGVNLSLSCHAASNPPAQYSWLIDGNI--QQ---HT 425 (642)
T ss_pred eEEEEEeCCCCCcceeeEEEEEEcCCCCCeecC-----CceEecCCCcEEEEEEcCccCCCeEEEEECCEE--cC---CC
Confidence 4689999999874 55678888865432 1111 122467888999999999988443 55443322 11 34
Q ss_pred EEEEEccCCCCCCeEEEEEEEecceeee---eeccCCC---CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeC
Q psy14060 97 QERVVDASELDDDGYYAITERKYYALSD---LSEQKPA---KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRE 170 (283)
Q Consensus 97 ~~L~i~~~~~~D~G~Y~C~a~n~~~~~~---~~~~~~~---~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~ 170 (283)
..|.|.+++.+|+|.|+|.|.|..+... ...+.+. .+|.+. ......+..|+.+.|.|.+.+ |.+.+.|+++
T Consensus 426 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~-~~~~~~v~~g~~v~l~C~~~~-~~~~i~W~~~ 503 (642)
T 1e07_A 426 QELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELPKPSIS-SNNSKPVEDKDAVAFTCEPEA-QNTTYLWWVN 503 (642)
T ss_pred ceEEEccCChhhCeEEEEEEEcCCCCCcccceEEEEEeccCCCceEe-cCCceeecCCCeEEEEEECCC-CCcEEEEEEC
Confidence 5799999999999999999999986321 1222222 244443 344567889999999999985 8899999999
Q ss_pred CEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEE-EEEEEEEeccCCCCCCCCCCeEEecCCceEEc
Q psy14060 171 DFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC-SANLVVEEKRQGGRGGVVPPSFLTTISSAVIN 249 (283)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~ 249 (283)
+..+....++.+... ...|.|.++..+|+|.|+|.|.|..|...+ .+.|.|.. .|+.+...+....+.
T Consensus 504 g~~l~~~~~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~---------~p~~~~~~~~~~~v~ 572 (642)
T 1e07_A 504 GQSLPVSPRLQLSNG--NRTLTLFNVTRNDARAYVCGIQNSVSANRSDPVTLDVLY---------GPDTPIISPPDSSYL 572 (642)
T ss_pred CEeCCCCCcEEEcCC--CcEEEEeecChhcCceEEEEeEcCCCCccCCCEEEEEEe---------CCCcceecCCceeEE
Confidence 999887666655432 357999999999999999999999987544 57888875 255566666778899
Q ss_pred CCCeEEEEEEEEeeCCCeeEEeeCCEEecC
Q psy14060 250 VGQLARFDAKISATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 250 ~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~ 279 (283)
.|+.+.|.|.+.|.|.|.+.|++||..+..
T Consensus 573 ~g~~~~l~C~~~g~p~p~v~W~~~g~~i~~ 602 (642)
T 1e07_A 573 SGANLNLSCHSASNPSPQYSWRINGIPQQH 602 (642)
T ss_pred cCCcEEEEEEeccCCCCeEEEEECCEECcc
Confidence 999999999999999999999999998764
No 15
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.95 E-value=3.2e-28 Score=202.10 Aligned_cols=230 Identities=13% Similarity=0.128 Sum_probs=164.0
Q ss_pred CCceeeecCCeeeecCcEEEEEEEccC-cc--ce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecc
Q psy14060 49 EPSASGVHGKEIHTAKSQQVQKEKKGD-KE--IV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYY 120 (283)
Q Consensus 49 ~p~~~~~~~~~v~~g~~v~l~C~~~g~-~~--i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 120 (283)
.|.|.......+.+|+.++|.|.+.+. |. +. ..+....++.+. .+...|.|.+++.+|+|.|+|.+.|..
T Consensus 7 ~P~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~ 84 (317)
T 2y25_A 7 GPHFVEYLSWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDR 84 (317)
T ss_dssp CCEEEEEEEEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCSCC-------CCEEEEETTCCSTTCSCEEEEEESSS
T ss_pred CCcEeeeeeEEECCCCeEEEEEEEcCCCCCCEEEEEECCeEcCCCCcEEEE--CCeEEEEEccCCcccCeEEEEEEECCC
Confidence 455553333457889999999999987 42 32 233334444433 245799999999999999999999988
Q ss_pred eee-eeeccCCCCCCeEEecCCceeecCCCcEEEEEEEee----------ecCCEEEEEeCCEecCCCCCeEEEEeCCEE
Q psy14060 121 ALS-DLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG----------DPLPTIKWFREDFPITSSPDFQIHTFSTKS 189 (283)
Q Consensus 121 ~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g----------~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~ 189 (283)
+.. ....+.+..+|.+...+....+..|+.+.|.|.+.+ .|.+.+.|++++..+....++.+...+...
T Consensus 85 g~~~~~~~l~v~~~~~~~~~~~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~~~ 164 (317)
T 2y25_A 85 GKDKSRLKLVDEAFKELMMEVCKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQI 164 (317)
T ss_dssp CEEEEEECCSTHHHHHHHHHHHHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBCCCCSSEEEEECSSEE
T ss_pred CcEEEEEEEEEecCccccccCCceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEECCCCCCeEEeccCCEE
Confidence 743 333444433443333333445566777777777766 688999999999998877778887777778
Q ss_pred EEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEec----------cCCCCCCCCCCeEEec-CCceEEcCCCeEEEEE
Q psy14060 190 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK----------RQGGRGGVVPPSFLTT-ISSAVINVGQLARFDA 258 (283)
Q Consensus 190 ~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~----------~~~~~~~~~~p~~~~~-~~~~~v~~g~~v~L~C 258 (283)
.|.|.++..+|.|.|+|.+.|..|.......+.+... .........+|.+... +....+..|+.+.|.|
T Consensus 165 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C 244 (317)
T 2y25_A 165 WLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTC 244 (317)
T ss_dssp EEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCCSEEEEETTSBBCEEE
T ss_pred EEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCCccEEEEcCCEEEEEE
Confidence 8999999999999999999999988887777664310 0000000124555554 4456899999999999
Q ss_pred EEEeeCCCeeEEeeCCEEecCC
Q psy14060 259 KISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 259 ~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
.+.|.|.|.+.|+++|+.+...
T Consensus 245 ~~~g~p~p~i~W~~~g~~~~~~ 266 (317)
T 2y25_A 245 NVWGDPPPEVSWLKNEKALASD 266 (317)
T ss_dssp EEECSSCCEEEEEESSSEECCC
T ss_pred EEecCCCCEEEEEECCEeCCCC
Confidence 9999999999999999888654
No 16
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.95 E-value=2.1e-27 Score=210.79 Aligned_cols=240 Identities=12% Similarity=0.030 Sum_probs=175.7
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-EEee-------cCCCEEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKIT-------ATETTEME 91 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~-------~~~~~~~~ 91 (283)
.+.|.|+| | .+....|.|..++.....+ ....+.+|+.+.|.|.+.|.+... .|.. ...++.+.
T Consensus 94 ~Y~C~a~n--g-~~~~~~l~V~~p~~~~~~~-----~~~~v~~G~~v~l~C~~~~~~~~~v~W~~~~g~~l~~~~~~~~~ 165 (524)
T 2ec8_A 94 KYTCTNKH--G-LSNSIYVFVRDPAKLFLVD-----RSLYGKEDNDTLVRCPLTDPEVTNYSLKGCQGKPLPKDLRFIPD 165 (524)
T ss_dssp EEEEEETT--S-CEEEEEEECCCSSCSBCCC-----CCCCEETTSCEEECCCBSCCCCSCEEEECSSSCCCCSSCEEEEE
T ss_pred EEEEeecC--C-cceEEEEEECCCCcccccc-----cceEEEcCCeEEEECcCCCCccceEEEEccCCcCcCCCCceeEC
Confidence 46789999 5 3777888887654432221 122477788999999999877222 4432 23334433
Q ss_pred EcCCEEEEEEccCCCCCCe-EEEEEEEecceee--eeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeeecCCE
Q psy14060 92 HKGKIQERVVDASELDDDG-YYAITERKYYALS--DLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPT 164 (283)
Q Consensus 92 ~~~~~~~L~i~~~~~~D~G-~Y~C~a~n~~~~~--~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~ 164 (283)
. ...|.|.+++.+|+| .|+|.+.|..+.. ....+.+ ..+|.+...+....+..|+.+.|.|.+.+.|.+.
T Consensus 166 ~---~~~L~i~~~~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~ 242 (524)
T 2ec8_A 166 P---KAGIMIKSVKRAYHRLCLHCSVDQEGKSVLSEKFILKVRPAFKAVPVVSVSKASYLLREGEEFTVTCTIKDVSSSV 242 (524)
T ss_dssp T---TTEEEEESCCGGGTTCEEEEEEC----CCCCCCEECCEECCCCSCCEEECSCSEEEEETTSCEEEEEEEEESSTTC
T ss_pred C---CccEEEeccchhhCCceEEEEEEECCceEEEEEEEEEEEeCCCCCCcEEecCCcceEEcCCcEEEEEEEecCCCcE
Confidence 2 236899999999999 9999999886632 2333443 3688888888888899999999999999988876
Q ss_pred -EEEEeCCEec--CCCCCeEEE---EeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCe
Q psy14060 165 -IKWFREDFPI--TSSPDFQIH---TFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPS 238 (283)
Q Consensus 165 -~~W~k~~~~~--~~~~~~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~ 238 (283)
+.|++++..+ .......+. .......|.|.++..+|+|.|+|.+.|..|.....+.|.|.. +|.
T Consensus 243 ~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p~ 312 (524)
T 2ec8_A 243 YSTWKRENSQTKLQEKYNSWHHGDFNYERQATLTISSARVNDSGVFMCYANNTFGSANVTTTLEVVD----------KGF 312 (524)
T ss_dssp EEEEEETTCSCCCCEEEEEEECSSSCEEEEEEEEESSCCTTTCEEEEEEEECSSCEEEEEEEEEEES----------SCE
T ss_pred EEEEEeCCCCCccccccccccccCCccceEEEEEECCCCHHHCEEEEEEEEecCCceEEEEEEEEec----------cCc
Confidence 9999999873 221111111 112245799999999999999999999999988888898884 566
Q ss_pred EEecC---CceEEcCCCeEEEEEEEEeeCCCe-eEEeeCCEEecCC
Q psy14060 239 FLTTI---SSAVINVGQLARFDAKISATKPLD-VYWLKVSSLSDVK 280 (283)
Q Consensus 239 ~~~~~---~~~~v~~g~~v~L~C~~~g~p~~~-v~W~~~g~~l~~~ 280 (283)
+...+ ....+.+|+.+.|.|.+.|.|.|. +.|+++|+.+...
T Consensus 313 ~~~~~~~~~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~~~~~~ 358 (524)
T 2ec8_A 313 INIFPMINTTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNRTFTDK 358 (524)
T ss_dssp EEEEESSCSEEEECTTCCEEEEEEEEEESCCCEEEEESSSCBCSSS
T ss_pred eEeecCCCceEEEcCCCcEEEEEEEeecCCCcEEEEEECCeeccCC
Confidence 65544 357899999999999999999998 9999999887654
No 17
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.95 E-value=1.1e-26 Score=216.30 Aligned_cols=241 Identities=17% Similarity=0.227 Sum_probs=185.4
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-EEeecCCCEEEEEcCCEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITATETTEMEHKGKIQE 98 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~~~~~~~~~~~~~~~ 98 (283)
.+.|.|+|..|..+....|.|..++.....|. ...+.+|+.++|.|.+.|.|... .|...+... .. ....
T Consensus 320 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~~~~~~-----~~~v~~G~~v~l~C~~~g~p~~~v~W~k~g~~~--~~--~~~~ 390 (816)
T 3dmk_A 320 KYLCVVNNSVGGESVETVLTVTAPLSAKIDPP-----TQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAI--GH--SESV 390 (816)
T ss_dssp EEEEEEECSSCEEEEEEEEEECEEEEEEEESS-----EEECCTTSCEEEEEEEEEECCCEEEEEETTEEC--SC--CSSE
T ss_pred EEEEEEEcCCCceEEEEEEEEcCCCceeeCCC-----ceEecCCCCEEEEEEEeccCCCEEEEEECCEEC--CC--CCCE
Confidence 57899999999998888888876543222221 12366788999999999987433 444433211 11 2347
Q ss_pred EEEccCCCCCCeEEEEEEEecceee-eeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEec
Q psy14060 99 RVVDASELDDDGYYAITERKYYALS-DLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPI 174 (283)
Q Consensus 99 L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~ 174 (283)
|.|.+++.+|+|.|+|.+.|..+.. ....+.+ ..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+
T Consensus 391 L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~g~~l 470 (816)
T 3dmk_A 391 LRIESVKKEDKGMYQCFVRNDRESAEASAELKLGGRFDPPVIRQAFQEETMEPGPSVFLKCVAGGNPTPEISWELDGKKI 470 (816)
T ss_dssp EEESSCCGGGCEEEEEEEECSSCEEEECCEEECCCSSCCCEEEEECCCEEECSSSCEEEEEEEECSSCCEEEEEETTEEC
T ss_pred EEEcCCCHHHCEEEEEEEECCCCcEEEEEEEEEccccCCCceEecCcceEEcCCCCEEEEEEEecCCCCEEEEEECCEEC
Confidence 9999999999999999999987732 2222222 45788877777788999999999999999999999999999998
Q ss_pred CCCCCeEEEEe-----CCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEc
Q psy14060 175 TSSPDFQIHTF-----STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVIN 249 (283)
Q Consensus 175 ~~~~~~~~~~~-----~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~ 249 (283)
....++..... ...+.|.|.++..+|+|.|+|.|.|..|.....+.|.|.. +|. ...+....+.
T Consensus 471 ~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~----------~p~-~~~~~~~~v~ 539 (816)
T 3dmk_A 471 ANNDRYQVGQYVTVNGDVVSYLNITSVHANDGGLYKCIAKSKVGVAEHSAKLNVYG----------LPY-IRQMEKKAIV 539 (816)
T ss_dssp CSCTTEEEEEEECTTSCEEEEEEESSCCTTTCEEEEEEEEETTEEEEEEEEEEECS----------SCE-ECCCCCEEEE
T ss_pred CCCCCcccccEEecCCCcEEEEEEeeccccCCEEEEEEEEECCCeEEEEEEEEEec----------CCe-eEccCCeEEe
Confidence 87666554321 1235799999999999999999999999988888888874 453 3445567889
Q ss_pred CCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 250 VGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 250 ~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
.|+.+.|.|.+.+.|.+.+.|+++|+.+...
T Consensus 540 ~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~ 570 (816)
T 3dmk_A 540 AGETLIVTCPVAGYPIDSIVWERDNRALPIN 570 (816)
T ss_dssp TTCCEEEECCEECSSEEEEEEEETTEESCCS
T ss_pred cCCeEEEEEEecCCCCCEEEEEECCeEcccC
Confidence 9999999999999998899999999988643
No 18
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.95 E-value=1e-26 Score=198.84 Aligned_cols=241 Identities=14% Similarity=0.115 Sum_probs=174.7
Q ss_pred ceEEEEEcCCeeee-eeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEE-ccCccce-EEeec------------
Q psy14060 20 LKSRTASSDRSGVS-TEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEK-KGDKEIV-RKITA------------ 84 (283)
Q Consensus 20 ~~~~~a~n~~g~~~-~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~-~g~~~i~-~~~~~------------ 84 (283)
.+.|.|.|..|... ....|.|...+. |.+... ...+.+|+.+.|.|.+ .|.|... .|...
T Consensus 76 ~Y~C~a~n~~g~~~s~~~~l~v~~~~~----p~~~~~-~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 150 (395)
T 1bih_A 76 HYQCFAETPAGVASSRVISFRKTYLIA----SPAKTH-EKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTD 150 (395)
T ss_dssp EEEEEEEETTEEEECCCEEEEEEEEEC----CCCEEE-EECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCC
T ss_pred EEEEEEEeCCCeEEeEEEEEEEEEeec----CCcCCc-ceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCccccccc
Confidence 57899999999875 335555554322 222211 2236678899999996 6766332 33322
Q ss_pred -CCCEEEEEcCCEEEEEEccCCCCCCe---EEEEEEEecceeeee-------eccCC-------CCCCeEEecCCceeec
Q psy14060 85 -TETTEMEHKGKIQERVVDASELDDDG---YYAITERKYYALSDL-------SEQKP-------AKPPVFTKKIQPCRAF 146 (283)
Q Consensus 85 -~~~~~~~~~~~~~~L~i~~~~~~D~G---~Y~C~a~n~~~~~~~-------~~~~~-------~~~p~~~~~~~~~~~~ 146 (283)
..++..... ..|.|.+++.+|+| .|+|.+.|..+.... ..+.. ..+|.+ .+....+.
T Consensus 151 ~~~~~~~~~~---~~L~i~~v~~~d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~ 225 (395)
T 1bih_A 151 FDRRITAGPD---GNLYFTIVTKEDVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAK 225 (395)
T ss_dssp CCTTEEECTT---SCEEEEEECGGGCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEE
T ss_pred ccccEEEcCC---CcEEEEEEeeccCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEE
Confidence 334444322 36899999999999 999999998774211 11111 112333 34667889
Q ss_pred CCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEE--eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEE-EEEEEE
Q psy14060 147 EQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT--FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC-SANLVV 223 (283)
Q Consensus 147 ~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v 223 (283)
.|+.+.|.|.+.|.|.+.+.|++++..+......++.. ......|.|.++..+|+|.|+|.+.|..|.... .+.|.|
T Consensus 226 ~G~~v~l~C~~~g~p~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~V 305 (395)
T 1bih_A 226 AGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRTSGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTV 305 (395)
T ss_dssp TTSCEEEEEEEECSSCCCCEEEETTEECCCCTTSSEESCSSSTTSEEEESSCCGGGCEEEEEEECCSSSSCEEEEEEEEE
T ss_pred CCCcEEEEEEeccCCCCeEEEEECCEEcCCCCceeEEEEecCCCceEEEccCChhhCEEEEEEEEeCCCCceEEEEEEEE
Confidence 99999999999999999999999999886543322221 122337999999999999999999999988655 788888
Q ss_pred EeccCCCCCCCCCCeEEecCCc-eEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 224 EEKRQGGRGGVVPPSFLTTISS-AVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 224 ~~~~~~~~~~~~~p~~~~~~~~-~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
.. +|.+...+.. ..+.+|+.+.|.|.+.|.|.|.+.|++||+.+...
T Consensus 306 ~~----------~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~g~~~~~~ 353 (395)
T 1bih_A 306 VS----------APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGG 353 (395)
T ss_dssp EE----------EEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEETTEECCSS
T ss_pred Ec----------CCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEECCEECCCC
Confidence 85 6788877776 78999999999999999999999999999988643
No 19
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.95 E-value=5.7e-26 Score=185.75 Aligned_cols=201 Identities=17% Similarity=0.240 Sum_probs=164.3
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-------EEeecCCCEEEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-------RKITATETTEMEH 92 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-------~~~~~~~~~~~~~ 92 (283)
.+.|.|+|..|..+....|.|..++.....+. ....+..|+.+.|.|.+.|.|... ..+....++.+..
T Consensus 75 ~Y~C~~~n~~g~~~~~~~l~V~~~p~~~~~~~----~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~ 150 (284)
T 2rik_A 75 QYTCYASNVAGKDSCSAQLGVQEPPRFIKKLE----PSRIVKQDEHTRYECKIGGSPEIKVLWYKDETEIQESSKFRMSF 150 (284)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCEEEECCC----SEEEEETTCCEEEEEEEESSSCCEEEEEETTEECCCSSSEEEEE
T ss_pred EEEEEEEECCceEEEEEEEEccCCCcccccCC----CceEecCCceEEEEEEEeeeCCCEEEEEECCEECcCCCcEEEEE
Confidence 57899999999999999999988654221111 111366788999999999988433 3444455666666
Q ss_pred cCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC
Q psy14060 93 KGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED 171 (283)
Q Consensus 93 ~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~ 171 (283)
......|.|.+++.+|+|.|+|.+.|..+. .....+.+..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++
T Consensus 151 ~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~~ 230 (284)
T 2rik_A 151 VESVAVLEMYNLSVEDSGDYTCEAHNAAGSASSSTSLKVKEPPVFRKKPHPVETLKGADVHLECELQGTPPFQVSWHKDK 230 (284)
T ss_dssp ETTEEEEEECSCCGGGCEEEEEEEECSSCEEEEEEEEEEECCCBCCSCCCCEEECTTCCEEEEEECBSSSCCEEEEEETT
T ss_pred cCCEEEEEECCCCcccCEEEEEEEEcCCCceeEEEEEEEecCCcceeCCCcceecCCCeEEEEEEEEecCCCEEEEEECC
Confidence 667889999999999999999999998873 3344556667888777777788999999999999999999999999999
Q ss_pred EecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 172 FPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
..+....++.+...+....|.|.++..+|.|.|+|.|.|..|.....+.|.|.
T Consensus 231 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 283 (284)
T 2rik_A 231 RELRSGKKYKIMSENFLTSIHILNVDSADIGEYQCKASNDVGSYTCVGSITLK 283 (284)
T ss_dssp EEECBTTTEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EECcCCCCEEEEEcCCEEEEEEcCCCcccCEEEEEEEEeCCCceeEEEEEEEc
Confidence 99988888888887778899999999999999999999999999888888775
No 20
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.95 E-value=1.6e-26 Score=191.42 Aligned_cols=217 Identities=15% Similarity=0.162 Sum_probs=158.3
Q ss_pred eeecCcEEEEEEEc-cCc--cce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeeeeccCCC
Q psy14060 60 IHTAKSQQVQKEKK-GDK--EIV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSDLSEQKPA 131 (283)
Q Consensus 60 v~~g~~v~l~C~~~-g~~--~i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~~~~ 131 (283)
+.+|+.+.|.|.+. |.| .+. ..+....++.+...+....|.|.+++.+|+|.|+|.+.|..+......+.+.
T Consensus 13 v~eg~~v~l~~~~~~~~p~~~v~W~k~~~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~~~n~~g~~~s~~l~v~ 92 (312)
T 2y23_A 13 VDDDGVISLNFECDKMTPKSEFSWSKDYVSTEDSPRLEVESKGNKTKMTFKDLGMDDLGIYSCDVTDTDGIASSYLIDEE 92 (312)
T ss_dssp ECTTCCEEEEEECSSCCTTCCEEEEETTEECTTCTTEEEEEETTEEEEEESSCCGGGCEEEEEEESSSCCCCEEEEECHH
T ss_pred EecCCeEEEEEEEeCCCCCcEEEEEECCEECCCCCCEEEEEeCCEEEEEECcCCccCCEEEEEEEEeCCCcEEEEEEEEe
Confidence 55677888888886 345 333 4555567888888888899999999999999999999998774333333332
Q ss_pred C------------CCeEEecC-CceeecCCCcEEEEEEEe-eecCCEEEEEeCCEecCCCCCeEEEEe--CCEEEEEEcC
Q psy14060 132 K------------PPVFTKKI-QPCRAFEQDQARFEVEFD-GDPLPTIKWFREDFPITSSPDFQIHTF--STKSILIMRQ 195 (283)
Q Consensus 132 ~------------~p~~~~~~-~~~~~~~g~~v~l~C~~~-g~p~~~~~W~k~~~~~~~~~~~~~~~~--~~~~~l~i~~ 195 (283)
. +|.+.... ....+..|+.+.|.|.+. +.|.+.+.|++++..+....++.+... .....|.|.+
T Consensus 93 ~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~L~i~~ 172 (312)
T 2y23_A 93 ELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEK 172 (312)
T ss_dssp HHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEECSSSSCEEEEETTTTEEEEEESC
T ss_pred eeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECeeCCcEEEEEccCCCEEEEEEcc
Confidence 1 44444333 367889999999999998 889999999999999988777666654 4567799999
Q ss_pred CCCCCCEEEEEEEEeCCceeEEEEEEEEEecc--------CC---CCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeC
Q psy14060 196 VFMEDSGVFAVIAENRGGKAKCSANLVVEEKR--------QG---GRGGVVPPSFLTTISSAVINVGQLARFDAKISATK 264 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~--------~~---~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p 264 (283)
+..+|+|.|+|.+.+..+..... +.+.... .. ......+|.|..... ..+.+|+.+.|.|.+.+.|
T Consensus 173 ~~~~d~G~Y~C~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~v~~G~~~~l~C~~~~~p 249 (312)
T 2y23_A 173 LQDEDEGTYTFQLQDGKATNHST--VVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLS-WEVTGECNVLLKCKVANIK 249 (312)
T ss_dssp CCGGGCEEEEEEEESSSCEEEEE--EEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEE-EEEETTTEEEEEEEEESCC
T ss_pred CCcccCEeEEEEEEeCCceEEEE--EEEcchhhhhhcccccccccchhhccCCceeecce-EEEeCCCEEEEEEEEcCCC
Confidence 99999999999998754443333 3221000 00 000002466654433 6789999999999999999
Q ss_pred CC-eeEEeeCCEEecC
Q psy14060 265 PL-DVYWLKVSSLSDV 279 (283)
Q Consensus 265 ~~-~v~W~~~g~~l~~ 279 (283)
.| .+.|++||+.+..
T Consensus 250 ~~~~v~W~~~g~~~~~ 265 (312)
T 2y23_A 250 KETHIVWYKDEREISV 265 (312)
T ss_dssp SSCEEEEEETTEEEEE
T ss_pred CCCEEEEeeCCEECCC
Confidence 88 9999999999873
No 21
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.95 E-value=1.8e-26 Score=196.99 Aligned_cols=239 Identities=14% Similarity=0.142 Sum_probs=172.0
Q ss_pred ceEEEEEcCCeee-eeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCcc---ce-EEeecC---------
Q psy14060 20 LKSRTASSDRSGV-STEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKE---IV-RKITAT--------- 85 (283)
Q Consensus 20 ~~~~~a~n~~g~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~---i~-~~~~~~--------- 85 (283)
.+.|.|+|..|.. +....+.+...+.....+. ...+.+|+.++|.|.+.+.+. .. .|....
T Consensus 79 ~Y~C~a~n~~g~~~s~~~~v~v~~~p~~~~~~~-----~~~v~~G~~v~l~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~ 153 (388)
T 2v5m_A 79 VYACLARNQFGSIISRDVHVRAVVAQYYEADVN-----KEHVIRGNSAVIKCLIPSFVADFVEVVSWHTDEEENYFPGAE 153 (388)
T ss_dssp EEEEEEEETTEEEECCCEEEEEECCCCCCCBCC-----CEEEETTSCEEECCBCCTTTTTTEEEEEEEETTCCEECSSSC
T ss_pred eEEEEEEccCCeEEecceEEEEccccccccCcc-----ceeeecCCcEEEEEECcCCCCCCcceEEEEeCCCcccccccC
Confidence 5789999999985 5667777776554332221 124778889999999988641 22 333322
Q ss_pred --CCEEEEEcCCEEEEEEccCCCCCC-eEEEEEEEecceee-ee----eccCCCCC-----CeEE-ecCCceeecCCCcE
Q psy14060 86 --ETTEMEHKGKIQERVVDASELDDD-GYYAITERKYYALS-DL----SEQKPAKP-----PVFT-KKIQPCRAFEQDQA 151 (283)
Q Consensus 86 --~~~~~~~~~~~~~L~i~~~~~~D~-G~Y~C~a~n~~~~~-~~----~~~~~~~~-----p~~~-~~~~~~~~~~g~~v 151 (283)
.++.+.. ...|.|.+++.+|+ |.|+|.+.|..+.. .. ..+.+..+ |.+. .......+..|+.+
T Consensus 154 ~~~~~~~~~---~~~L~i~~v~~~d~~G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~~~~~v~~G~~v 230 (388)
T 2v5m_A 154 YDGKYLVLP---SGELHIREVGPEDGYKSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQKPLELMVAHTI 230 (388)
T ss_dssp BTTTEEECT---TSCEEESSCCGGGGGCCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCCCCEEEETTSCE
T ss_pred CCCcEEEcc---CCcEEEecCCccccCeeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccCCceEEeeCCcE
Confidence 2333321 24699999999999 99999999875421 11 11222222 1111 12234567889999
Q ss_pred EEEEEEeeecCCEEEEEeCCEec------CCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 152 RFEVEFDGDPLPTIKWFREDFPI------TSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 152 ~l~C~~~g~p~~~~~W~k~~~~~------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
.|.|.+.|.|.+.+.|++++..+ ....++. .. ...|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 231 ~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~--~~--~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 306 (388)
T 2v5m_A 231 SLLCPAQGFPAPSFRWYKFIEGTTRKQAVVLNDRVK--QV--SGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTA 306 (388)
T ss_dssp EECCCCEEESCCEEEEEEECTTSSCEEECCCSSSEE--EE--TTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEE
T ss_pred EEEEECCCCCCCEEEEEecCCCCcccccccccCcee--cc--cCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeC
Confidence 99999999999999999975332 1222222 11 23699999999999999999999999988888888885
Q ss_pred ccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 226 KRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 226 ~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
+|.+...+....+.+|+.+.|.|.+.|.|.|.|.|++||+.+...
T Consensus 307 ----------~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~i~~~ 351 (388)
T 2v5m_A 307 ----------PLSAKIDPPTQTVDFGRPAVFTCQYTGNPIKTVSWMKDGKAIGHS 351 (388)
T ss_dssp ----------EEEEEEESSEEEECTTSCEEEEEEEEEECCCEEEEEETTEECSCC
T ss_pred ----------CCccccCCCcEEecCCCCEEEEEEeccccCCeEEEEECCEECccC
Confidence 567777777888999999999999999999999999999998653
No 22
>3dmk_A DOWN syndrome cell adhesion molecule (dscam) ISOF 1.30.30, N-terminal eight IG domains...; immunoglobulin domain; HET: NAG NDG; 4.19A {Drosophila melanogaster}
Probab=99.95 E-value=8.8e-27 Score=217.04 Aligned_cols=239 Identities=16% Similarity=0.152 Sum_probs=182.6
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-E------EeecCCCEEEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-R------KITATETTEMEH 92 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~------~~~~~~~~~~~~ 92 (283)
.+.|.|+|..|..+....|.|...+..... ....+..|+.+.|.|.+.|.|... . .+....+..+.
T Consensus 504 ~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~------~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~~~~l~~~~~~~~~- 576 (816)
T 3dmk_A 504 LYKCIAKSKVGVAEHSAKLNVYGLPYIRQM------EKKAIVAGETLIVTCPVAGYPIDSIVWERDNRALPINRKQKVF- 576 (816)
T ss_dssp EEEEEEEETTEEEEEEEEEEECSSCEECCC------CCEEEETTCCEEEECCEECSSEEEEEEEETTEESCCSTTEEEC-
T ss_pred EEEEEEEECCCeEEEEEEEEEecCCeeEcc------CCeEEecCCeEEEEEEecCCCCCEEEEEECCeEcccCCceEEe-
Confidence 378999999999999999999876532222 222467788999999999988322 2 33333344433
Q ss_pred cCCEEEEEEccCC-CCCCeEEEEEEEecceee--eeeccCCCCCCeEEe-cCCceeecCCCcEEEEEEEeeecCC-EEEE
Q psy14060 93 KGKIQERVVDASE-LDDDGYYAITERKYYALS--DLSEQKPAKPPVFTK-KIQPCRAFEQDQARFEVEFDGDPLP-TIKW 167 (283)
Q Consensus 93 ~~~~~~L~i~~~~-~~D~G~Y~C~a~n~~~~~--~~~~~~~~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~~-~~~W 167 (283)
....|.|.++. .+|+|.|+|.+.|..+.. ....+.+..+|.+.. ......+..|+.+.|.|.+.+.+.+ .+.|
T Consensus 577 --~~~~l~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~~v~v~~~p~~~~~~~~~~~~~~G~~v~L~C~~~~~~~~~~i~W 654 (816)
T 3dmk_A 577 --PNGTLIIENVERNSDQATYTCVAKNQEGYSARGSLEVQVMVLPRIIPFAFEEGPAQVGQYLTLHCSVPGGDLPLNIDW 654 (816)
T ss_dssp --TTSEEEESSCCHHHHCEEEEEEEEESSSCEEEEEEEEEEECCCCCBCCCCCSSCEESSCEEEEEEBCCCSSSCCEEEE
T ss_pred --cCCeEEEEecCccccCEEEEEEEEECCCceeeeeEEEEEecCCccccccccccccCCCCeEEEEEEEeCCCCCCEEEE
Confidence 22368999998 589999999999998732 223333334444332 2344568889999999999866654 9999
Q ss_pred EeCCEecCCCCCeEEEE-eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCce
Q psy14060 168 FREDFPITSSPDFQIHT-FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSA 246 (283)
Q Consensus 168 ~k~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~ 246 (283)
++++..+.....+.... ......|.|.++..+|+|.|+|.|.|..|.....+.|.|.. +|.+...+...
T Consensus 655 ~~~g~~l~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~----------~P~~~~~~~~~ 724 (816)
T 3dmk_A 655 TLDGQAISEDLGITTSRVGRRGSVLTIEAVEASHAGNFTCHARNLAGHQQFTTPLNVYV----------PPRWILEPTDK 724 (816)
T ss_dssp EETTBCCCGGGTCEEEEETTTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECEEE----------EEEEEECCCCE
T ss_pred EECCeEcCCCCCeeEEEcCCCeeEEEEccCChhhCEEEEEEEEeCCccEEEEEEEEEEe----------CCceeeecccc
Confidence 99999886554444433 34567899999999999999999999999998889998885 78888888888
Q ss_pred EEcCCCeEEEEEEEEeeCCCeeEEeeCCEEe
Q psy14060 247 VINVGQLARFDAKISATKPLDVYWLKVSSLS 277 (283)
Q Consensus 247 ~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l 277 (283)
.+..|+.+.|.|.+.|.|.|.|+|+++|..+
T Consensus 725 ~v~~G~~v~l~C~~~g~P~p~i~W~k~~~~~ 755 (816)
T 3dmk_A 725 AFAQGSDAKVECKADGFPKPQVTWKKAVGDT 755 (816)
T ss_dssp EEETTCCEEEECEEEEESCCEEECCEECSSS
T ss_pred eecCCCcEEEEEEEecCCCCeEEEEecCCCC
Confidence 9999999999999999999999999987543
No 23
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.95 E-value=1.8e-26 Score=204.45 Aligned_cols=240 Identities=10% Similarity=-0.023 Sum_probs=158.7
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-EEeecCCCEEE--EEcCCE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITATETTEM--EHKGKI 96 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~~~~~~~--~~~~~~ 96 (283)
.+.|.|.|..|..+..+.+.|...... .+.-+. ....++.+.|.|.+.|.|... .|......... ......
T Consensus 117 ~Y~C~~~n~~~~~~~~~~v~v~~~~~~--~~~~p~----~~~~~~~~~L~C~a~G~P~P~i~W~~~~~~~~~~~~~~~~~ 190 (527)
T 3qs9_E 117 EYLLFIQSEATNYTILFTVSIRNTLLY--TLRRPY----FRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAV 190 (527)
T ss_dssp EEEEEEEC--CEEEEEEEEEEC-------CEEEEE----EEECSSSSCEEEEEEESSCCEEEEEEC-------------C
T ss_pred eEEEEEEeccccEEEEEEEEECCceee--ccCCCc----EEecCCceEEEEEEceecCCeEEEEECCCCCccccccCCcE
Confidence 356788999888888777777632211 111111 123455788999999999443 44432221110 011111
Q ss_pred EEEEEccCCCCCCeEEEEEEEecceeee--eeccCCCCCCeEEecCCceeecCCCcEEEEEEEe-eecCCEEEEEeCCEe
Q psy14060 97 QERVVDASELDDDGYYAITERKYYALSD--LSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFD-GDPLPTIKWFREDFP 173 (283)
Q Consensus 97 ~~L~i~~~~~~D~G~Y~C~a~n~~~~~~--~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~~~W~k~~~~ 173 (283)
.......+..+|+|.|+|.|.|..+... ...+.+..+|.+ .+....+..|+.+.|.|.+. +.|.+.++|++++..
T Consensus 191 ~~~~~~~~~~~d~G~Y~C~A~N~~G~~~~~~~~l~V~~~p~~--~p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~ 268 (527)
T 3qs9_E 191 VKKEEKVLHELFGTDIRCCARNELGRECTRLFTIDLNQTPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKA 268 (527)
T ss_dssp EEECCSEECCCCSSCEEEEEECSSCEEEEECEEEESSSCCCC--SCCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSC
T ss_pred EEEeeeeccccCCEEEEEEEEeCCCcccceEEEEEEeccCcc--CCCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEE
Confidence 2223334568999999999999988433 234555555554 45677889999999999997 889999999999987
Q ss_pred cCCCCCeEEEE-e-----CCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecC--Cc
Q psy14060 174 ITSSPDFQIHT-F-----STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI--SS 245 (283)
Q Consensus 174 ~~~~~~~~~~~-~-----~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~--~~ 245 (283)
+.....+.... . ....+|.|.++..+|+|.|+|.|.|. ....+.|.|.. +|.+...+ ..
T Consensus 269 l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~N~---~~~~~~L~V~~----------~p~i~~~~~~~~ 335 (527)
T 3qs9_E 269 LEEGNYFEMSTYSTNRTMIRILFAFVSSVARNDTGYYTCSSSKH---PSQSALVTIVE----------KGFINATNSSED 335 (527)
T ss_dssp CCGGGEEEEEEEETTTEEEEEEEEEESSCCGGGCEEEEEEETTE---EEEEEEEEEC------------CEEECCCSCCE
T ss_pred CCCCceeeeeeeccCcceeeEEEEEEccCCcccCeEEEEEEEeC---CCceEEEEEEc----------cCccccccCccc
Confidence 76543322211 1 12346999999999999999999887 55567777764 45554433 23
Q ss_pred eEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 246 AVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 246 ~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
..+.+|+.+.|.|.+.|.|.|.|.|++||+.+...
T Consensus 336 ~~v~~G~~v~L~C~~~g~P~p~i~W~k~g~~l~~~ 370 (527)
T 3qs9_E 336 YEIDQYEEFCFSVRFKAYPQIRCTWTFSRKSFPCE 370 (527)
T ss_dssp ECCCTTCCCCEEEEEEEESCCEEEEEETTEEEECB
T ss_pred EEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCC
Confidence 56789999999999999999999999999998654
No 24
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.95 E-value=2.3e-25 Score=202.34 Aligned_cols=238 Identities=13% Similarity=0.097 Sum_probs=171.8
Q ss_pred ceEEEEEcCCeee-eeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-EEeecCCCEEEEEcCCEE
Q psy14060 20 LKSRTASSDRSGV-STEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITATETTEMEHKGKIQ 97 (283)
Q Consensus 20 ~~~~~a~n~~g~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~~~~~~~~~~~~~~ 97 (283)
.+.|.|+|..|.. +....|.|...+.. |.+.. ....+.+|+.+.|.|.+.|.|... .|...+... . ...
T Consensus 178 ~Y~C~a~n~~~~~~s~~~~l~V~~~p~~---~~~~~-~~~~~~~G~~~~l~C~~~g~p~~~i~W~~~g~~i--~---~~~ 248 (642)
T 1e07_A 178 SYKCETQNPVSARRSDSVILNVLYGPDA---PTISP-LNTSYRSGENLNLSCHAASNPPAQYSWFVNGTFQ--Q---STQ 248 (642)
T ss_pred eEEEEEecCCCCcccceEEEEEEeCCCC---cEEec-CCcccccCCEEEEEEEcCCCCCcEEEEEECCeEc--c---cCC
Confidence 4689999988864 56678888865431 11111 122477889999999999888443 555443322 1 345
Q ss_pred EEEEccCCCCCCeEEEEEEEecceee---eeeccCCCC---CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC
Q psy14060 98 ERVVDASELDDDGYYAITERKYYALS---DLSEQKPAK---PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED 171 (283)
Q Consensus 98 ~L~i~~~~~~D~G~Y~C~a~n~~~~~---~~~~~~~~~---~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~ 171 (283)
.|.|.+++.+|+|.|+|.+.|..+.. ....+.+.. +|.+. ......+..|+.+.|.|.+.+.| +.+.|++++
T Consensus 249 ~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~v~v~~~~~~p~i~-~~~~~~~~~g~~v~l~C~~~~~p-~~v~W~~~g 326 (642)
T 1e07_A 249 ELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPPKPFIT-SNNSNPVEDEDAVALTCEPEIQN-TTYLWWVNN 326 (642)
T ss_pred ceEEecccccCCeEEEEEEEeCCCceEEeeeEEEEEEccCCCCEEE-cCCceeEecCCcEEEEEECCCCC-ccEEEEECC
Confidence 79999999999999999999987632 122233322 23332 33334555678899999999865 799999999
Q ss_pred EecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeE-EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcC
Q psy14060 172 FPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINV 250 (283)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~ 250 (283)
..+....++.+... ...|.|.++..+|+|.|+|.+.|..|... ..+.|.|... |+.+...+....+.+
T Consensus 327 ~~l~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~s~~~~l~V~~~---------p~~~~~~~~~~~~~~ 395 (642)
T 1e07_A 327 QSLPVSPRLQLSND--NRTLTLLSVTRNDVGPYECGIQNELSVDHSDPVILNVLYG---------PDDPTISPSYTYYRP 395 (642)
T ss_pred ccCCCcCCEEEeCC--CCEEEEeccCcccCeeEEEEEeCCCCCcceeeEEEEEEcC---------CCCCeecCCceEecC
Confidence 98876666555432 35799999999999999999999988643 4577777752 333344456678899
Q ss_pred CCeEEEEEEEEeeCCCeeEEeeCCEEecC
Q psy14060 251 GQLARFDAKISATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 251 g~~v~L~C~~~g~p~~~v~W~~~g~~l~~ 279 (283)
|+.+.|.|.+.|.|.|.+.|++||+.+..
T Consensus 396 g~~~~l~C~~~g~p~~~i~W~~~g~~~~~ 424 (642)
T 1e07_A 396 GVNLSLSCHAASNPPAQYSWLIDGNIQQH 424 (642)
T ss_pred CCcEEEEEEcCccCCCeEEEEECCEEcCC
Confidence 99999999999999999999999998754
No 25
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.94 E-value=1.2e-25 Score=201.84 Aligned_cols=239 Identities=8% Similarity=0.050 Sum_probs=175.7
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCc-c-ce-EEe-ec-----------
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDK-E-IV-RKI-TA----------- 84 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~-~-i~-~~~-~~----------- 84 (283)
.+.|.|.|..|..+....|.|...+ |... .+.+|+.+.|.|.+.+.+ . +. .|. ..
T Consensus 199 ~Y~C~a~n~~g~~~~~~~l~V~~~~-----p~~~-----~~~~G~~v~l~C~~~~~~~~~~~~~w~~~~g~~~~~~~~~~ 268 (585)
T 2ocw_A 199 QYLCQAGDDSNSNKKNADLQVLKPE-----PELV-----YEDLRGSVTFHCALGPEVANVAKFLCRQSSGENCDVVVNTL 268 (585)
T ss_pred EEEEEeccCCccccceEEEEEccCC-----Ccee-----EEcCCCcEEEEEEcCCCCCCceEEEEEeCCCCCcceEEeCC
Confidence 3679999999998888889887643 2211 256788999999974333 2 32 221 11
Q ss_pred -------CCCEEEEEc--CCEEEEEEccCCCCCCeEEEEEEEecceee-----eeeccCCCCCCeEEecCCceeecCCCc
Q psy14060 85 -------TETTEMEHK--GKIQERVVDASELDDDGYYAITERKYYALS-----DLSEQKPAKPPVFTKKIQPCRAFEQDQ 150 (283)
Q Consensus 85 -------~~~~~~~~~--~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-----~~~~~~~~~~p~~~~~~~~~~~~~g~~ 150 (283)
..++.+... .+...|.|.+++.+|+|.|+|.+.|..... ....+.+..+|.+...+....+..|+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~G~~ 348 (585)
T 2ocw_A 269 GKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEGSPIQAWQLFVNEESTIPRSPTVVKGVAGSS 348 (585)
T ss_pred CcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCccccCceeeEEEEEecccccccCCcceEEEeCCc
Confidence 223333321 344589999999999999999999964433 444566667787777778888999999
Q ss_pred EEEEEEEeeecCCEE----EEEe--CCE--ecCC---------CCCeEEEE--eCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 151 ARFEVEFDGDPLPTI----KWFR--EDF--PITS---------SPDFQIHT--FSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 151 v~l~C~~~g~p~~~~----~W~k--~~~--~~~~---------~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
+.|.|.+.+.|.+.+ .|++ ++. .+.. ..++.+.. .....+|.|.++..+|+|.|+|.| |.
T Consensus 349 v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a-n~ 427 (585)
T 2ocw_A 349 VAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRDAGFYWCLT-NG 427 (585)
T ss_pred EEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhhCEEEEEcc-cC
Confidence 999999999998876 7999 776 4322 22344432 223346999999999999999999 88
Q ss_pred CceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEE----eeCCCeeEEeeCCEEecC
Q psy14060 212 GGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKIS----ATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 212 ~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~----g~p~~~v~W~~~g~~l~~ 279 (283)
.|.....+.|.|.. .+|.+. .+....+.+|+.+.|.|.+. +.|.|.|.|++||..+..
T Consensus 428 ~g~~~~~~~l~V~~---------~~p~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~p~~~v~W~k~g~~~~~ 489 (585)
T 2ocw_A 428 DTLWRTTVEIKIIE---------GEPNLK-VPGNVTAVLGETLKVPCHFPCKFSSYEKYWCKWNNTGCQALP 489 (585)
T ss_pred CCccceeEEEEEec---------Cccccc-cCCceeEecCCcEEEEEEecCCCCCCccEEEEEeecCceeee
Confidence 88888888888875 244443 36677899999999999997 677889999999987743
No 26
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.94 E-value=2.3e-25 Score=197.63 Aligned_cols=246 Identities=8% Similarity=0.047 Sum_probs=161.6
Q ss_pred eEEEEEcCCee---eeeeeEEEEeCCCCCCCCCceeeecC-CeeeecCcEEEEEEEccCcc--ce-EEeecCCCEEE---
Q psy14060 21 KSRTASSDRSG---VSTEETKIIDGRKVSVPEPSASGVHG-KEIHTAKSQQVQKEKKGDKE--IV-RKITATETTEM--- 90 (283)
Q Consensus 21 ~~~~a~n~~g~---~~~~~~l~v~~~~~~~~~p~~~~~~~-~~v~~g~~v~l~C~~~g~~~--i~-~~~~~~~~~~~--- 90 (283)
+.|.|.|..|. ......|.|...+. ..|.+..... ..+..|+.+.|.|.+.|.+. +. .|...+.....
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V~~~~~--~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 162 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTVLGQPK--ANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVE 162 (523)
T ss_pred EEEEEccCCCccccccCceEEEeccCCC--cCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceE
Confidence 57889988764 23445677754322 2333332222 22456889999999998762 22 44433221110
Q ss_pred -----EEcCC----EEEEEEccCCCCCCeEEEEEEEecceeeeee-c----cCCCCCCeEEecCCceeecCCCcEEEEEE
Q psy14060 91 -----EHKGK----IQERVVDASELDDDGYYAITERKYYALSDLS-E----QKPAKPPVFTKKIQPCRAFEQDQARFEVE 156 (283)
Q Consensus 91 -----~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~-~----~~~~~~p~~~~~~~~~~~~~g~~v~l~C~ 156 (283)
....+ ...|.|.++..+|+|.|+|.+.|..+..... . ..+..+|.+........+..|+.+.|.|.
T Consensus 163 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~P~v~~~~~~~~~~~G~~~~l~C~ 242 (523)
T 2rcj_C 163 TTKPSKQSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSASTKGPSVFPLAPSSKSTSGGTAALGCL 242 (523)
T ss_pred eccccccCCCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCCCCcCCEEEecCCCcccccCCceEEEEE
Confidence 01111 2369999999999999999999987632211 1 12334565554444455688999999999
Q ss_pred Eeee-cCC-EEEEEeCCEecCCCCCeEEEEeCC----EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCC
Q psy14060 157 FDGD-PLP-TIKWFREDFPITSSPDFQIHTFST----KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGG 230 (283)
Q Consensus 157 ~~g~-p~~-~~~W~k~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~ 230 (283)
+.|. |.| .+.|++++..+.......+...+. .+.|.|.++..+| |.|+|.|.|..|.......+.+..
T Consensus 243 ~~g~~P~p~~v~W~k~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~g~~~~~~~l~v~~----- 316 (523)
T 2rcj_C 243 VKDYFPQPVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPLS----- 316 (523)
T ss_pred EeceeCCCeEEEEecCCcccceEeCCcEecCCCcEEEEEEEEechhhcCC-ceEEEEEEeCCCCcceEEecCCCc-----
Confidence 9886 777 899999998754211111111111 3479999999999 999999999999877666666543
Q ss_pred CCCCCCCeE-EecCCceE-EcCCCeEEEEEEEEeeCC----CeeEEeeCCEEecC
Q psy14060 231 RGGVVPPSF-LTTISSAV-INVGQLARFDAKISATKP----LDVYWLKVSSLSDV 279 (283)
Q Consensus 231 ~~~~~~p~~-~~~~~~~~-v~~g~~v~L~C~~~g~p~----~~v~W~~~g~~l~~ 279 (283)
.|.+ +..+.... +.+|+.+.|.|.+.|.|+ +.|+|+|||+.+..
T Consensus 317 -----~P~~~~~~p~~~~~v~~g~~~~l~C~~~g~~p~~~~~~v~W~k~g~~l~~ 366 (523)
T 2rcj_C 317 -----LPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPQVKFNWYVDGVQVHN 366 (523)
T ss_pred -----CceEEecCCCchhhcccCCceEEEEEEecccCCCCceEEEEEECCeEccC
Confidence 3443 43444343 789999999999998654 48999999998754
No 27
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.94 E-value=4.9e-26 Score=186.54 Aligned_cols=209 Identities=12% Similarity=0.101 Sum_probs=153.1
Q ss_pred eeeecCcEEEEEEEccCccceEEee-cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCe-
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIVRKIT-ATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPV- 135 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~~~~~-~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~- 135 (283)
.+.+|+.++|.|.+.+. + .|.. ...............|.|.+++.+|+|.|+|.+.|..+. .....+.+..+|.
T Consensus 15 ~v~~G~~v~L~C~~~~~--v-~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~ 91 (289)
T 3ejj_X 15 VVEPGETVTLRCVSNGS--V-EWDGPISPYWTLDPESPGSTLTTRNATFKNTGTYRCTELEDPMAGSTTIHLYVKDPAHS 91 (289)
T ss_dssp EECTTCCEEEEEECSSC--C-EEECSCSSSSEECCCSSCCEEEESSCCGGGCEEEEEECCC-----CEEEEEEECCSSCS
T ss_pred EECCCCCEEEEEEeCCc--E-EEccCCCceEEEeccCCccEEEEeeeccccCEEEEEEEeccCCcceeEEEEEEeCCCcc
Confidence 36678899999999884 3 2332 222223333445678999999999999999998877663 3333444444444
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCCE-EEEEe-CCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe-CC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFR-EDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN-RG 212 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~-~~W~k-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n-~~ 212 (283)
+...+....+..|+.+.|.|.+.+.+.+. +.|++ ++..+....++.+... ..|.|.++..+|.|.|+|.+.| ..
T Consensus 92 ~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~a~~~~~ 168 (289)
T 3ejj_X 92 WNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYFFSPW---RGFIIRKAKVLDSNTYVCKTMVNGR 168 (289)
T ss_dssp EEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEEEETT---TEEEESSCCGGGCEEEEEEEEETTE
T ss_pred eecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEEECCC---CCEEEeecccccCEEEEEEEEeCCC
Confidence 56666778899999999999999876665 99986 6666665555544322 3599999999999999999994 44
Q ss_pred ceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCCeeEEeeCCEEecC
Q psy14060 213 GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 213 g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~~v~W~~~g~~l~~ 279 (283)
+.....+.|.|.... ..+|.+...+....+.+|+.+.|.|.+.+ .|.+.+.|+++|..+..
T Consensus 169 ~~~~~~~~l~V~~~~------~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~~~ 230 (289)
T 3ejj_X 169 ESTSTGIWLKVNRVH------PEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVGFNVILKRGDTKLEI 230 (289)
T ss_dssp EEECCCEEEEEESSC------CCCCEEEEESSSEECCSSSCEEEEEEEEESSSCCEEEEEETTEECCC
T ss_pred ccccccEEEEEEECC------CCCCeEEecCCceEEEeCCcEEEEEEeCCCCCceEEEEEECCEEeec
Confidence 455556777777421 13688888888888889999999999998 78899999999998864
No 28
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.94 E-value=4.2e-26 Score=193.29 Aligned_cols=216 Identities=11% Similarity=0.023 Sum_probs=158.2
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-EEeecCCCEEEEEcCCEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITATETTEMEHKGKIQE 98 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~~~~~~~~~~~~~~~ 98 (283)
.+.|.|.|..+ ...|.|.... ..| ...+.+|+.+.|.|.+.+.|... .|...+.+... ....
T Consensus 81 ~Y~C~~~n~~~----~~~l~V~~~~---~~~------~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~----~~~~ 143 (363)
T 1wio_A 81 TYICEVEDQKE----EVQLLVFGLT---ANS------DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ----GGKT 143 (363)
T ss_dssp EEEEEETTEEE----EEEEEEEEEE---ESS------CSSEESBSCEEEEEECCTTCCCCEEEECSSSCEEE----ESSE
T ss_pred EEEEEEEECCC----cEEEEEEeCC---CCC------ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCcccc----cceE
Confidence 36777887754 4555555411 111 22478899999999999887433 66665555432 3457
Q ss_pred EEEccCCCCCCeEEEEEEEecceee-eeeccCCCCCCeEEecCCceeecCCCcEEEEEEEee-----ecCCEEEEEeCCE
Q psy14060 99 RVVDASELDDDGYYAITERKYYALS-DLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-----DPLPTIKWFREDF 172 (283)
Q Consensus 99 L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-----~p~~~~~W~k~~~ 172 (283)
|.|.+++.+|+|.|+|.+.|..+.. ....+.+..+|... ....+.+|+.+.|.|.+.+ .|.|.+.|++++.
T Consensus 144 L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~~p~~~---~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~ 220 (363)
T 1wio_A 144 LSVSQLELQDSGTWTCTVLQNQKKVEFKIDIVVLAFQKAS---SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERA 220 (363)
T ss_dssp EEECSBCGGGCEECEEEEEETTEEEEECCEECEECCSCSE---EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSC
T ss_pred EEEeeCChhcCCEEEEEEecCCCeEEEEEEEEEecCCCCC---CceEEecCCEEEEEEEEecccccCCCceeEEEecCCC
Confidence 9999999999999999999886632 22233333344322 4567888999999998877 7889999999998
Q ss_pred ecCC--------CCCeEEEE----------eCCEEEEEEcCCCCCCCEEEEEEEEeC--CceeEEEEEEEEEeccCCCCC
Q psy14060 173 PITS--------SPDFQIHT----------FSTKSILIMRQVFMEDSGVFAVIAENR--GGKAKCSANLVVEEKRQGGRG 232 (283)
Q Consensus 173 ~~~~--------~~~~~~~~----------~~~~~~l~i~~~~~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~~~~~~~~ 232 (283)
.+.. ..++.+.. ......|.|.++..+|+|.|+|.|.|. .|.....+.|.|...
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~~v------ 294 (363)
T 1wio_A 221 SSSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQALPQYAGSGNLTLALEAKTGKLHQEVNLVVMRA------ 294 (363)
T ss_dssp CCCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESSBCGGGCEEEEEEECBTTTTCCEEEEEEEEEEEE------
T ss_pred CccceEEEEEecCCeeeccccccchhhhcccCCceEEEEccCCcCcCcEEEEEEEEhhhcCeEEEEEeEEEEEe------
Confidence 8765 34444432 222447999999999999999999999 898887788877631
Q ss_pred CCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCe--eEEeeCCEEec
Q psy14060 233 GVVPPSFLTTISSAVINVGQLARFDAKISATKPLD--VYWLKVSSLSD 278 (283)
Q Consensus 233 ~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~--v~W~~~g~~l~ 278 (283)
.|+.+.|.|.+.|.|.|. +.|+++|+.+.
T Consensus 295 -----------------~g~~~~l~C~~~g~p~p~~~i~W~~~~~~~~ 325 (363)
T 1wio_A 295 -----------------TQLQKNLTCEVWGPTSPKLMLSLKLENKEAK 325 (363)
T ss_dssp -----------------CCCSSSEEEEEESSCCTTCCEEEECSSSSCS
T ss_pred -----------------cCCCeeEEEEEccccCCCccEEEEeCCCcee
Confidence 188899999999999887 99999998765
No 29
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.94 E-value=4.9e-25 Score=195.50 Aligned_cols=214 Identities=10% Similarity=0.075 Sum_probs=151.0
Q ss_pred eeeecCcEEEEEEEccCccce-EEeec--------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITA--------------------TETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~--------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|+.++|.|.+.|.+... .|... ..++.....+....|.|.+++.+|+|.|+|.+.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 90 (523)
T 2rcj_C 11 SGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGSKSGTSASLAISGLEAEDESDYYCASW 90 (523)
T ss_pred EEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEecCCCEEEEEECCCChhhCEEEEEEEc
Confidence 477889999999998876322 33221 235554445567899999999999999999999
Q ss_pred eccee----eeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeeecCC--EEEEEeCCEecCCCCCeEE--E-E
Q psy14060 118 KYYAL----SDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP--TIKWFREDFPITSSPDFQI--H-T 184 (283)
Q Consensus 118 n~~~~----~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~--~~~W~k~~~~~~~~~~~~~--~-~ 184 (283)
|..+. .....+.+ ..+|.+...+....+..|+.+.|.|.+.|.|++ .+.|+|++..+........ . .
T Consensus 91 n~~g~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~ 170 (523)
T 2rcj_C 91 NSSDNSYVFGTGTKVTVLGQPKANPTVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADGSPVKAGVETTKPSKQS 170 (523)
T ss_pred cCCCccccccCceEEEeccCCCcCCeEEecCCcccccCCCceEEEEEeccccCCceEEEEecCCCCCCCceEeccccccC
Confidence 87541 11223333 356776666666667789999999999987654 8999999988765322111 1 1
Q ss_pred eCC---EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEE
Q psy14060 185 FST---KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKIS 261 (283)
Q Consensus 185 ~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~ 261 (283)
.+. .+.|.|.++..+|.|.|+|.|.|..+.......+.+... ...+|.+........+.+|+.+.|.|.+.
T Consensus 171 ~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~------~~~~P~v~~~~~~~~~~~G~~~~l~C~~~ 244 (523)
T 2rcj_C 171 NNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTVAPTECSA------STKGPSVFPLAPSSKSTSGGTAALGCLVK 244 (523)
T ss_pred CCCEEEEEEEEEechhcCCCceEEEEEEecCcccccceeeeecCC------CCcCCEEEecCCCcccccCCceEEEEEEe
Confidence 111 236999999999999999999999887655554432210 01356665444445678999999999998
Q ss_pred ee-CCC-eeEEeeCCEEec
Q psy14060 262 AT-KPL-DVYWLKVSSLSD 278 (283)
Q Consensus 262 g~-p~~-~v~W~~~g~~l~ 278 (283)
|. |.| .|+|+++|..+.
T Consensus 245 g~~P~p~~v~W~k~g~~~~ 263 (523)
T 2rcj_C 245 DYFPQPVTVSWNSGALTSG 263 (523)
T ss_pred ceeCCCeEEEEecCCcccc
Confidence 86 777 899999998754
No 30
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.93 E-value=8.7e-26 Score=185.36 Aligned_cols=201 Identities=14% Similarity=0.110 Sum_probs=150.2
Q ss_pred eeeecCcEEEEEEEccCccceEEeecCCCE-EEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeeeeccCCCCCCeEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIVRKITATETT-EMEHKGKIQERVVDASELDDDGYYAITERKYYALSDLSEQKPAKPPVFT 137 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~-~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~p~~~ 137 (283)
.+.+|+.++|.|.+.| .+ .|...+... .....+ ..|.|.+++.+|+|.|+|.+.| +......+.+..+|.+.
T Consensus 23 ~v~~G~~v~l~C~~~~--~i-~W~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~n--g~~~~~~l~V~~~~~~~ 95 (290)
T 2o26_X 23 IVEAGDTLSLTCIDPD--FV-RWTFKTYFNEMVENKK--NEWIQEKAEATRTGTYTCSNSN--GLTSSIYVFVRDPAKLF 95 (290)
T ss_dssp EEETTSCEEEEEECTT--EE-EEEEECSSSCEEEECS--SEEEETTCCGGGCEEEEEEESS--SCEEEEEEEEECSSCCB
T ss_pred EEcCCCcEEEEECCCC--cE-EEecCCcceeeecCCC--ceEEEeccCHHhCeEEEEEeeC--CccEEEEEEEeCCCccc
Confidence 3677889999999998 44 344333322 122222 7899999999999999999998 43434444444555544
Q ss_pred ecCCceeecCCCcEEEEEEEeeecC-CEEEEE-eCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCE-EEEEEEEeCCce
Q psy14060 138 KKIQPCRAFEQDQARFEVEFDGDPL-PTIKWF-REDFPITSSPDFQIHTFSTKSILIMRQVFMEDSG-VFAVIAENRGGK 214 (283)
Q Consensus 138 ~~~~~~~~~~g~~v~l~C~~~g~p~-~~~~W~-k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G-~Y~C~a~n~~g~ 214 (283)
..+....+..|+.+.|.|.+.+ |. +.+.|+ +++..+....++.+... ..|.|.++..+|.| .|+|.+.|..+.
T Consensus 96 ~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~~~~---~~L~i~~v~~~d~G~~Y~C~a~n~~~~ 171 (290)
T 2o26_X 96 LVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVPNPK---AGITIKNVKRAYHRLCVRCAAQRDGTW 171 (290)
T ss_dssp CCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEEETT---TEEEEESCCGGGTTCEEEEEEEETTEE
T ss_pred ccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceeeCCC---CCEEEecccHHHCCCEEEEEEEECCce
Confidence 5666778889999999999986 87 899994 67877765444333222 36999999999999 999999998665
Q ss_pred eEE-EEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCe-eEEeeCCEE
Q psy14060 215 AKC-SANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLD-VYWLKVSSL 276 (283)
Q Consensus 215 ~~~-~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~-v~W~~~g~~ 276 (283)
... .+.|.|.... ..+|.+...+....+.+|+.+.|.|.+.|.|.|. +.|+++|..
T Consensus 172 ~~s~~~~l~V~~~~------~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~ 229 (290)
T 2o26_X 172 LHSDKFTLKVREAI------KAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQ 229 (290)
T ss_dssp EECCCEEEEEECCC------CSCCEEECSCSBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSS
T ss_pred EEeEEEEEEEEeCC------CCCCccccCCCcceEecCCcEEEEEEEecCCcceeEEEecCCCC
Confidence 433 4677776311 1478887777777899999999999999999996 999999876
No 31
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.93 E-value=1.6e-25 Score=188.61 Aligned_cols=211 Identities=12% Similarity=0.109 Sum_probs=132.2
Q ss_pred eeeecCcEEEEEEEccCcc-----------ce-EEeecC-------------CCEEEEEcCCEEEEEEccCCCCCCeEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKE-----------IV-RKITAT-------------ETTEMEHKGKIQERVVDASELDDDGYYA 113 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~-----------i~-~~~~~~-------------~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 113 (283)
.+.+|+.+.|.|.+.|.|. .. .|.... ...++...+ ..|.|.+++.+|+|.|+
T Consensus 18 ~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~D~G~Y~ 95 (349)
T 4dep_C 18 QVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPINFRLPENRISKEK--DVLWFRPTLLNDTGNYT 95 (349)
T ss_dssp EEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECCCCCGGGCEEEET--TEEEESSCCGGGCEEEE
T ss_pred EEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCcccccccccccCceEeecC--CEEEEccCChhhCEEEE
Confidence 4778899999999997542 22 333221 111121222 37999999999999999
Q ss_pred EEEEecceee-eeeccCCCCCCeEE----ecCCceeecCCCcEEEEEEE-----eeecCCEEEEEeCCEecCCCCCeEEE
Q psy14060 114 ITERKYYALS-DLSEQKPAKPPVFT----KKIQPCRAFEQDQARFEVEF-----DGDPLPTIKWFREDFPITSSPDFQIH 183 (283)
Q Consensus 114 C~a~n~~~~~-~~~~~~~~~~p~~~----~~~~~~~~~~g~~v~l~C~~-----~g~p~~~~~W~k~~~~~~~~~~~~~~ 183 (283)
|.+.|..+.. ....+.+..++... ..+....+..|+.+.|.|.+ .+.|.+.+.|+|++..+..... +.
T Consensus 96 C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~--~~ 173 (349)
T 4dep_C 96 CMLRNTTYCSKVAFPLEVVQKDSCFNSPMKLPVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNN--VI 173 (349)
T ss_dssp EEEECSSCEEEEEEEEEEECCCTTSCCSCCCCEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSS--EE
T ss_pred EEEecCCceEEEEEEEEEecCCcccCcccccCcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccc--ee
Confidence 9999987632 22223332222211 12334577889999999985 6778999999999998865433 22
Q ss_pred EeCCEEEEEEcCCCCCCCEEEEEEEEeCC-cee---EEEEEEEEEeccCCCCCCCCCCeEEecCCce--EEcCCCeEEEE
Q psy14060 184 TFSTKSILIMRQVFMEDSGVFAVIAENRG-GKA---KCSANLVVEEKRQGGRGGVVPPSFLTTISSA--VINVGQLARFD 257 (283)
Q Consensus 184 ~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~-g~~---~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~--~v~~g~~v~L~ 257 (283)
..+ ..|.|.++..+|+|.|+|.+.|.. |.. .....|.|..... ...+|.+....... .+..|+.+.|.
T Consensus 174 ~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~----~~~~p~i~~~~~~~~~~v~~G~~v~l~ 247 (349)
T 4dep_C 174 PEG--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPK----NAVPPVIHSPNDHVVYEKEPGEELLIP 247 (349)
T ss_dssp EET--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGG----GCCSCEEC----------------CCC
T ss_pred ecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCC----CCCCCeEecCCCceeEEEecCCcEEEE
Confidence 222 469999999999999999999986 443 4455666654210 00156665554433 78899999999
Q ss_pred EEEE----eeCCCeeEEeeCCEEecC
Q psy14060 258 AKIS----ATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 258 C~~~----g~p~~~v~W~~~g~~l~~ 279 (283)
|.+. |.|.|.+.|++||+.+..
T Consensus 248 C~~~~~~~g~p~p~v~W~~~g~~l~~ 273 (349)
T 4dep_C 248 CTVYFSFLMDSRNEVWWTIDGKKPDD 273 (349)
T ss_dssp EEEEECCCTTCCCEEEEESSCC----
T ss_pred EEEEEccCCCCCCEEEEEECCEEccc
Confidence 9999 468889999999988765
No 32
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.93 E-value=7.8e-24 Score=190.15 Aligned_cols=234 Identities=10% Similarity=0.091 Sum_probs=165.3
Q ss_pred eEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCc-cc-eEEeec--------------
Q psy14060 21 KSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDK-EI-VRKITA-------------- 84 (283)
Q Consensus 21 ~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~-~i-~~~~~~-------------- 84 (283)
+.|.|.|..|..+....|.|..++.....|.. ..+.+|+.++|.|.+.+.+ .. ..|...
T Consensus 90 Y~C~~~n~~~~~~~~~~l~V~~~p~~~~~~~~-----~~v~~G~~v~l~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~ 164 (585)
T 2ocw_A 90 YKCGLGINSRGLSFDVSLEVSQGPGLLNDTKV-----YTVDLGRTVTINCPFKTENAQKRKSLYKQIGLYPVLVIDSSGY 164 (585)
T ss_pred EEEEcccCCCCceEEEEEEEecCccccCCCcc-----EEEEcCCCEEEEEEecCCCCCccEEEEECCCCCceEEecCCcc
Confidence 67889999988888899999887665433322 1367788999999999654 22 133322
Q ss_pred -----CCCEEEEEcC---CEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEE
Q psy14060 85 -----TETTEMEHKG---KIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEV 155 (283)
Q Consensus 85 -----~~~~~~~~~~---~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C 155 (283)
..++.+...+ +...|.|.+++.+|+|.|+|.+.|..+. .....+.+..++ +....+..|+.+.|.|
T Consensus 165 ~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~~~-----p~~~~~~~G~~v~l~C 239 (585)
T 2ocw_A 165 VNPNYTGRIRLDIQGTGQLLFSVVINQLRLSDAGQYLCQAGDDSNSNKKNADLQVLKPE-----PELVYEDLRGSVTFHC 239 (585)
T ss_pred cCccccCcEEEEeccCCCcEEEEEEccCChhHCeEEEEEeccCCccccceEEEEEccCC-----CceeEEcCCCcEEEEE
Confidence 2344444322 2458999999999999999999988773 223333333322 2335677899999999
Q ss_pred EEeeecC---CEEEEE-eCCEe----cC--------CCCCeEEEEe--CCEEEEEEcCCCCCCCEEEEEEEEeCCceeE-
Q psy14060 156 EFDGDPL---PTIKWF-REDFP----IT--------SSPDFQIHTF--STKSILIMRQVFMEDSGVFAVIAENRGGKAK- 216 (283)
Q Consensus 156 ~~~g~p~---~~~~W~-k~~~~----~~--------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~- 216 (283)
.+ +.+. +.+.|+ +++.. +. ...++.+... .....|.|.++..+|+|.|+|.|.|..+...
T Consensus 240 ~~-~~~~~~~~~~~w~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~L~i~~v~~~d~G~Y~C~a~n~g~~~~~ 318 (585)
T 2ocw_A 240 AL-GPEVANVAKFLCRQSSGENCDVVVNTLGKRAPAFEGRILLNPQDKDGSFSVVITGLRKEDAGRYLCGAHSDGQLQEG 318 (585)
T ss_pred Ec-CCCCCCceEEEEEeCCCCCcceEEeCCCcCCcccCCceEeeccCCCcEEEEEEccCChhhCEEEEEEEEcCCCcccc
Confidence 97 4344 678896 88732 11 1223333322 2334799999999999999999999643331
Q ss_pred ---EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCee----EEee--CCE
Q psy14060 217 ---CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDV----YWLK--VSS 275 (283)
Q Consensus 217 ---~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v----~W~~--~g~ 275 (283)
..+.|.|.. +|.+...+....+.+|+.+.|.|.+.+.|.|.+ .|++ ||.
T Consensus 319 ~~~~~~~l~V~~----------~p~~~~~~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~ 376 (585)
T 2ocw_A 319 SPIQAWQLFVNE----------ESTIPRSPTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGR 376 (585)
T ss_pred CceeeEEEEEec----------ccccccCCcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCC
Confidence 667787774 667777777788999999999999999999876 7999 887
No 33
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.93 E-value=3.5e-23 Score=176.61 Aligned_cols=215 Identities=13% Similarity=0.123 Sum_probs=157.9
Q ss_pred CceeeecCCeeeecCcEEEEEEEccCccce-EEeec-------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEE
Q psy14060 50 PSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITA-------------TETTEMEHKGKIQERVVDASELDDDGYYAIT 115 (283)
Q Consensus 50 p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~-------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 115 (283)
|.+.......+.+|+.+.|.|.+.|.|... .|... ..++.+........|.|.+++.+|+|.|+|.
T Consensus 2 P~i~~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 81 (389)
T 2jll_A 2 PHIIQLKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYDCE 81 (389)
T ss_dssp CEEEECCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEEEE
T ss_pred CeEEecCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEEEE
Confidence 344443334577789999999999998332 44433 4566666556788999999999999999999
Q ss_pred EEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC--CeEEEEeCCEEEEE
Q psy14060 116 ERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP--DFQIHTFSTKSILI 192 (283)
Q Consensus 116 a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~--~~~~~~~~~~~~l~ 192 (283)
|.|..+. .....+.+..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.... ++.+...+....|.
T Consensus 82 a~n~~g~~~~~~~l~V~~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~ 161 (389)
T 2jll_A 82 AASRIGGHQKSMYLDIEYAPKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAKNTTNLKTYSTGRKMILE 161 (389)
T ss_dssp EECSSCEEEEEEEEEEEEEEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCTTCTTEEEEECSSCEEEE
T ss_pred EEeCCCCcceEEEEEEEeCCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcccCceEEEeccCCEEEEE
Confidence 9998874 34445666667777666555578899999999999999999999999999987643 56666666677899
Q ss_pred EcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe----eCCC--
Q psy14060 193 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA----TKPL-- 266 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g----~p~~-- 266 (283)
|.++..+|.|.|+|.|.|..|.......+.+.... .+|.... .....+..+.|.|.... .|..
T Consensus 162 i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P-------~~P~~~~----~~~~~~~~~~l~w~~p~~~~g~pi~~y 230 (389)
T 2jll_A 162 IAPTSDNDFGRYNCTATNHIGTRFQEYILALADVP-------SSPYGVK----IIELSQTTAKVSFNKPDSHGGVPIHHY 230 (389)
T ss_dssp ECCCSTTSSEEEEEEEEETTEEEEEEEEEEECCCC-------CCCEEEE----EEEECSSCEEEEEECCSCCTTSCEEEE
T ss_pred ECCCChhhCEEEEEEEEcCCCcEEEEEEEEecCCC-------CCCcceE----EeeccCCEEEEEEeCCCCCCCcceEEE
Confidence 99999999999999999999998877777765321 2332111 12234577888887422 1222
Q ss_pred eeEEeeCCE
Q psy14060 267 DVYWLKVSS 275 (283)
Q Consensus 267 ~v~W~~~g~ 275 (283)
.+.|.+++.
T Consensus 231 ~v~~~~~~~ 239 (389)
T 2jll_A 231 QVDVKEVAS 239 (389)
T ss_dssp EEEEEETTC
T ss_pred EEEEEECCC
Confidence 467887764
No 34
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.93 E-value=1e-25 Score=187.05 Aligned_cols=210 Identities=11% Similarity=0.149 Sum_probs=148.4
Q ss_pred eeeecCcEEEEEEEccCc-cce-EEeec----------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeee-
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EIV-RKITA----------TETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSDL- 125 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i~-~~~~~----------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~- 125 (283)
.+.+|+.+.|.|.+.|.+ ... .|... ..++... + ..|.|.+++.+|+|.|+|.+.|..+....
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~--~--~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~ 91 (315)
T 1itb_B 16 VSSANEIDVRPCPLNPNEHKGTITWYKDDSKTPVSTEQASRIHQH--K--EKLWFVPAKVEDSGHYYCVVRNSSYCLRIK 91 (315)
T ss_dssp EEETTSCCCCBCCCCSCCCSSCCCEECTTSCSCSCCCTTSSSEEC--S--SBEECTTCCGGGCSCCEECCCSSSCCCCEE
T ss_pred EEcCCCcEEEEeeccCcCCCceEEEEeCCCcCccccccCCcEecc--C--CeEEECCCChhhCEEEEEEEeCCceEEEEE
Confidence 477788999999999887 222 33332 2233322 2 27999999999999999999988763221
Q ss_pred eccC-CCCCCeEEecC---CceeecCCCcEEEEEEE------eeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcC
Q psy14060 126 SEQK-PAKPPVFTKKI---QPCRAFEQDQARFEVEF------DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQ 195 (283)
Q Consensus 126 ~~~~-~~~~p~~~~~~---~~~~~~~g~~v~l~C~~------~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~ 195 (283)
..+. +..+|.+...+ ....+..|+.+.|.|.+ .|.|.+.+.|+|++..+...... ..... ..|.|.+
T Consensus 92 ~~v~v~~~~p~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~~~~-~~~~~--~~L~i~~ 168 (315)
T 1itb_B 92 ISAKFVENEPNLCYNAQAIFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLDNIH-FSGVK--DRLIVMN 168 (315)
T ss_dssp CCCEEECCCTTSSSCGGGEEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCCSSS-EEEET--TEEEESS
T ss_pred EEEEEeCCCCCcccccccccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCccce-EeecC--ceEEEEe
Confidence 1121 12334332222 23467889999999998 78899999999999998653321 22222 2699999
Q ss_pred CCCCCCEEEEEEEE-eCCceeE---EEEEEEEEeccCCCCCCCCCCeEEecCCc-eEEcCCCeEEEEEEEEeeCCCeeEE
Q psy14060 196 VFMEDSGVFAVIAE-NRGGKAK---CSANLVVEEKRQGGRGGVVPPSFLTTISS-AVINVGQLARFDAKISATKPLDVYW 270 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~-n~~g~~~---~~~~l~v~~~~~~~~~~~~~p~~~~~~~~-~~v~~g~~v~L~C~~~g~p~~~v~W 270 (283)
+..+|+|.|+|.+. |..|... ....+.+.... ...+|.+...+.. ..+.+|+.+.|.|.+.|.|.|.+.|
T Consensus 169 v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~-----~~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W 243 (315)
T 1itb_B 169 VAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEEN-----KPTRPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYW 243 (315)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCC-----CCCCCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEE
T ss_pred ceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCC-----CCCCCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEE
Confidence 99999999999999 7777753 23334343211 1146777665554 4789999999999999999999999
Q ss_pred eeCCEEecCC
Q psy14060 271 LKVSSLSDVK 280 (283)
Q Consensus 271 ~~~g~~l~~~ 280 (283)
++||..+...
T Consensus 244 ~~~g~~i~~~ 253 (315)
T 1itb_B 244 KWNGSVIDED 253 (315)
T ss_dssp EETTEECCTT
T ss_pred EECCEECCcc
Confidence 9999988764
No 35
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.93 E-value=5.6e-25 Score=184.00 Aligned_cols=206 Identities=13% Similarity=0.099 Sum_probs=143.9
Q ss_pred eeecCcEEEEEEEccC---------ccce-EEeecCCCEEEEEc-CCEEEEEEccCCCCCCe-EEEEEEEecceeee--e
Q psy14060 60 IHTAKSQQVQKEKKGD---------KEIV-RKITATETTEMEHK-GKIQERVVDASELDDDG-YYAITERKYYALSD--L 125 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~---------~~i~-~~~~~~~~~~~~~~-~~~~~L~i~~~~~~D~G-~Y~C~a~n~~~~~~--~ 125 (283)
+.+|+.+.|.|.+.+. |... .|...+........ .....|.|.+++.+|+| .|+|.+.|..|... .
T Consensus 41 v~eG~~v~L~C~~~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~L~i~~v~~~D~Gs~Y~C~a~n~~g~~~~~~ 120 (329)
T 3oq3_B 41 AALGEPFSAKCPPIEDSLLSHRYNDKDNVVNWEKIGKTRRPLNRRVKNGDLWIANYTSNDSHRRYLCTVTTKNGDCVQGI 120 (329)
T ss_dssp ECTTSCEEECCHHHHCTTTGGGSCCTTCEEEEEECSSSCEECSTTEETTEEEESSCCGGGGGCCEEEEEECTTSCEEEEE
T ss_pred EECCCeEEEEccCCCCccccccccCCCCeeEEEECCCCccccCceeecceEEEcCCChHhCCCcEEEEEEeCCCceeeEE
Confidence 6678899999999884 3222 44443322211000 01347999999999999 99999999886321 1
Q ss_pred eccCCCCCCeEEecCCceeecCCCcEEEEEEEeeec-CCEEEEEeCCEecCC-CCCeEEEEeCCEEEEEEcCCCCCCCEE
Q psy14060 126 SEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDP-LPTIKWFREDFPITS-SPDFQIHTFSTKSILIMRQVFMEDSGV 203 (283)
Q Consensus 126 ~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p-~~~~~W~k~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~ 203 (283)
....+..+|.+........+..|+.+.|.|.+.|.| .+.+.|+|++..+.. ..++... + ..|.|.++..+|+|.
T Consensus 121 ~~~v~~~~p~~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~~--~--~~L~I~~v~~~D~G~ 196 (329)
T 3oq3_B 121 VRSHIRKPPSCIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQS--G--QNLIIHNPELEDSGR 196 (329)
T ss_dssp EEEEECCCCSCEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEEE--T--TEEEECSCCGGGCEE
T ss_pred EEEEEcCCCcEeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEecC--C--CEEEEeecChhhCEE
Confidence 112233345544443334567799999999999999 899999999998863 2333332 2 469999999999999
Q ss_pred EEEEEEeC--CceeEE----EEEEEEEeccCCCCCCCCCC-eEEecCCceEEcCCCeEEEEEEEEeeC---CC-eeEEee
Q psy14060 204 FAVIAENR--GGKAKC----SANLVVEEKRQGGRGGVVPP-SFLTTISSAVINVGQLARFDAKISATK---PL-DVYWLK 272 (283)
Q Consensus 204 Y~C~a~n~--~g~~~~----~~~l~v~~~~~~~~~~~~~p-~~~~~~~~~~v~~g~~v~L~C~~~g~p---~~-~v~W~~ 272 (283)
|+|.|.|. .|.... .+.|.|.... ... .+. .+....+..|+.+.|.|.+.|.| .+ .+.|++
T Consensus 197 Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~-------~~~~~~~-~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~ 268 (329)
T 3oq3_B 197 YDCYVHYDDVRIKNDIVVSRCKILTVIPSQ-------DHRFKLI-LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWEN 268 (329)
T ss_dssp EEEEEEECCTTSSSCEEEEEEEEEEEECCC-------CCCEEEE-CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEEC
T ss_pred EEEEEEecccCCCceeEEEeeEEEEEECCC-------CCCCcee-cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEE
Confidence 99999997 544322 3667776421 000 333 55667899999999999999988 67 889999
Q ss_pred CCEEe
Q psy14060 273 VSSLS 277 (283)
Q Consensus 273 ~g~~l 277 (283)
+|..+
T Consensus 269 ~g~~i 273 (329)
T 3oq3_B 269 PSGWI 273 (329)
T ss_dssp TTSCB
T ss_pred CCeee
Confidence 99874
No 36
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.93 E-value=2.6e-26 Score=192.15 Aligned_cols=210 Identities=18% Similarity=0.252 Sum_probs=105.3
Q ss_pred CeeeecCcEEEEEEEccCc---cce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeecc
Q psy14060 58 KEIHTAKSQQVQKEKKGDK---EIV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQ 128 (283)
Q Consensus 58 ~~v~~g~~v~l~C~~~g~~---~i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~ 128 (283)
..+.+|+.++|.|.+.+.+ .+. ..+....++.+ ....|.|.+++.+|+|.|+|.+.|. +. .....+
T Consensus 18 ~~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~----~~~~L~i~~v~~~D~G~Y~C~a~n~-~~~~~~~~l 92 (334)
T 1ry7_B 18 LVFGSGDAVELSCPPPGGGPMGPTVWVKDGTGLVPSERVLV----GPQRLQVLNASHEDSGAYSCRQRLT-QRVLCHFSV 92 (334)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEecCCcEEEEeeCCCCCCCcceEEEECCeeCCCcccEEe----ccceEEEeecccccCEEEEEEEEeC-CeEEEEEEE
Confidence 3577899999999999863 332 12222233322 2468999999999999999999988 42 222223
Q ss_pred CCCC----------------------CCeEEec----CCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCe-E
Q psy14060 129 KPAK----------------------PPVFTKK----IQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDF-Q 181 (283)
Q Consensus 129 ~~~~----------------------~p~~~~~----~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~-~ 181 (283)
.+.. +|.+... .....+..|+.+.|.|.+.|.|.+.+.|++++..+....++ .
T Consensus 93 ~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~ 172 (334)
T 1ry7_B 93 RVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGG 172 (334)
T ss_dssp --------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCCEEECCBTTBCCCTTSSTTC
T ss_pred EEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCCeEEEEECCEECcccccccc
Confidence 3322 3333221 12356788999999999999999999999999887654322 1
Q ss_pred EEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEEE
Q psy14060 182 IHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKI 260 (283)
Q Consensus 182 ~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~~ 260 (283)
+........|.|.++..+|+|.|+|.+.|..|.....+.|.|..... .+|.+.. .+....+..|+.+.|.|.+
T Consensus 173 ~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~------~~p~~~~~~~~~~~~~~G~~v~l~C~~ 246 (334)
T 1ry7_B 173 IKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSP------HRPILQAGLPANQTAVLGSDVEFHCKV 246 (334)
T ss_dssp CCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCC------SSCBCCTTCSCCEEEESSCCEEECCCC
T ss_pred eecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCC------CCCceEecCCCceEEeCCCCEEEEEEE
Confidence 11223345799999999999999999999999988888888875311 1343433 2456788999999999999
Q ss_pred EeeCCCeeEEee----CCEEec
Q psy14060 261 SATKPLDVYWLK----VSSLSD 278 (283)
Q Consensus 261 ~g~p~~~v~W~~----~g~~l~ 278 (283)
.|.|.|.+.|++ ||..+.
T Consensus 247 ~g~p~p~v~W~~~~~~~g~~~~ 268 (334)
T 1ry7_B 247 YSDAQPHIQWLKHVEVNGSKVG 268 (334)
T ss_dssp BCSSCEEEEEEECCCGGGCSBC
T ss_pred ecCCCCeEEEEECCcCCCcccc
Confidence 999999999999 776654
No 37
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.92 E-value=1.2e-22 Score=176.75 Aligned_cols=235 Identities=9% Similarity=0.009 Sum_probs=155.7
Q ss_pred ccCcceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeee-cCCeeeecCcEEEEEEEccCccc---e-EEeecCCCEEE
Q psy14060 16 KKNILKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGV-HGKEIHTAKSQQVQKEKKGDKEI---V-RKITATETTEM 90 (283)
Q Consensus 16 ~~~~~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~v~~g~~v~l~C~~~g~~~i---~-~~~~~~~~~~~ 90 (283)
.++- +.|.|.|..|..+....|.|..++... ... ....+.+|+.++|.|.+.|.+.. . .|...+.....
T Consensus 59 ~d~g-Y~C~a~~~~~~~~~~~~l~V~~~P~~~-----~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~~v~W~k~g~~l~~ 132 (450)
T 1z7z_I 59 EDSQ-PMCYSNCPDGQSTAKTFLTVYWTPERV-----ELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKR 132 (450)
T ss_dssp SCBC-CEEEEEETTEEEEEECEEEEEBCCSEE-----EECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEE
T ss_pred cCCe-eEEEEeCCCCcceeEEEEEEEeCCCcc-----eecCCCceEeeCCeEEEEEEecCCCCCcCcEEEEeeCCEEeec
Confidence 3344 789999888888888899998754311 111 11347788999999999997733 3 55544433322
Q ss_pred EE---cCCEEEEEEccCCCCCCeEEEEEEEecceee---------eeeccCC----CCCCeEEecCCceeecCCCcEEEE
Q psy14060 91 EH---KGKIQERVVDASELDDDGYYAITERKYYALS---------DLSEQKP----AKPPVFTKKIQPCRAFEQDQARFE 154 (283)
Q Consensus 91 ~~---~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~---------~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~ 154 (283)
.. ......|.|.++..+|+|.|+|.+.|..+.. ....+.+ ..+|.+.. ...+..|+.+.|.
T Consensus 133 ~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~~~~p~~~~---~~~v~~G~~v~l~ 209 (450)
T 1z7z_I 133 EPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVS---PRVLEVDTQGTVV 209 (450)
T ss_dssp EECCTTTEEEEEEEECCSSCSSCEEEEEEEEECGGGTSCEEEEECCCEECEECCCCSSCCEEEC---CSEEETTSEEEEE
T ss_pred ccccccccceEEEEEeeccccCceEEEEEEcccCCCCceEEeeccCccceeeeccCCCCCEecC---ceeEEeCCcEEEE
Confidence 21 2335689999999999999999999985521 1111211 12343322 2578899999999
Q ss_pred EEEeee-c--CCEEEEEeCCEecCCCCCeEEEEeCCEEEEE-EcCCCCCCCE--EEEEEEEeCCceeEEEEEEEEEeccC
Q psy14060 155 VEFDGD-P--LPTIKWFREDFPITSSPDFQIHTFSTKSILI-MRQVFMEDSG--VFAVIAENRGGKAKCSANLVVEEKRQ 228 (283)
Q Consensus 155 C~~~g~-p--~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~-i~~~~~~d~G--~Y~C~a~n~~g~~~~~~~l~v~~~~~ 228 (283)
|.+.|. | .+.+.|++++..+.. + +........+. ..++..+|.| .|+|.+.|..|.....+.|.|...
T Consensus 210 C~~~g~~P~~~~~~~W~~~~~~~~~--~--~~~~~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~-- 283 (450)
T 1z7z_I 210 CSLDGLFPVSEAQVHLALGDQRLNP--T--VTYGNDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSF-- 283 (450)
T ss_dssp EEEESCTTGGGCEEEEEETTEECCC--E--EEEETTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECC--
T ss_pred EEeeCCCCCCceEEEEeCCCEeCCc--e--EEecCCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecC--
Confidence 999998 6 789999999998765 2 33333332222 2267899999 999999999999888889988863
Q ss_pred CCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEe
Q psy14060 229 GGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLS 277 (283)
Q Consensus 229 ~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l 277 (283)
.+|.+.. ....+.+|+.+.|.|.+. |.|.++| +|+.+
T Consensus 284 ------~~p~i~~--~~~~v~~G~~v~l~C~~~--p~p~i~W--~g~~~ 320 (450)
T 1z7z_I 284 ------PAPNVIL--TKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPA 320 (450)
T ss_dssp ------CCCEEEE--SCSEEETTCEEEEEEEC-----------------
T ss_pred ------CCCeEec--CCeeEeCCCcEEEEEecC--CCCEeEE--CCEEc
Confidence 2455543 345899999999999998 8889999 88877
No 38
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.92 E-value=6.6e-25 Score=190.27 Aligned_cols=250 Identities=11% Similarity=0.071 Sum_probs=161.8
Q ss_pred ceEEEEEcCCeee-eeeeEEEEeCCCCCCCCCceeeecC-CeeeecCcEEEEEEEcc-Cccc-e-EEeecCCC------E
Q psy14060 20 LKSRTASSDRSGV-STEETKIIDGRKVSVPEPSASGVHG-KEIHTAKSQQVQKEKKG-DKEI-V-RKITATET------T 88 (283)
Q Consensus 20 ~~~~~a~n~~g~~-~~~~~l~v~~~~~~~~~p~~~~~~~-~~v~~g~~v~l~C~~~g-~~~i-~-~~~~~~~~------~ 88 (283)
.+.|.|.|..|.. .....|.|.... ..|.+..... .....|+.+.|.|.+.| .|.. . .|...+.. .
T Consensus 89 ~Y~C~a~n~~~~~~~~~~~l~V~~~~---~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~ 165 (438)
T 1qgc_4 89 TYYCQQSNEVPLTFGAGTKLDLKRAD---AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLN 165 (438)
T ss_dssp EEEEEECSSTTCCBCCCEEEEECCCC---BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEE
T ss_pred eEEEEEecCCCccccCceeEEecCCC---CCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCcee
Confidence 4678899987743 444566664321 2444443222 22345778999999987 4532 2 33332211 0
Q ss_pred EEE----EcC---CEEEEEEccCCCCCCeEEEEEEEecceeee-eeccCCCCCCeEEecCCceeecCCCcEEEEEEEeee
Q psy14060 89 EME----HKG---KIQERVVDASELDDDGYYAITERKYYALSD-LSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD 160 (283)
Q Consensus 89 ~~~----~~~---~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~ 160 (283)
... ..+ ....|.|.++..+|+|.|+|.+.|..+... ...+....++.....+....+..|+.+.|.|.+.|.
T Consensus 166 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~ 245 (438)
T 1qgc_4 166 SWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKSFNRNECEVMLVESGGGLVKPGGSLKLSCTASGF 245 (438)
T ss_dssp EEECCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEEEETTC-CCEEEEECCEEECTTCCEEEEEEEESS
T ss_pred ccccccCCCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecccccccceeEEecCCceEEecCCcEEEEEEEccc
Confidence 000 011 145799999999999999999999877421 122222223334445566789999999999999988
Q ss_pred c--CCEEEEEeC--CEecC-----------------CCCCeEEEEe--CCEEEEEEcCCCCCCCEEEEEEEEeCCc----
Q psy14060 161 P--LPTIKWFRE--DFPIT-----------------SSPDFQIHTF--STKSILIMRQVFMEDSGVFAVIAENRGG---- 213 (283)
Q Consensus 161 p--~~~~~W~k~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~~g---- 213 (283)
| .+.+.|+|+ +..+. ...++.+... .....|.|.++..+|+|.|+|.|.|..+
T Consensus 246 p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 325 (438)
T 1qgc_4 246 IFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSLRSADTAMYYCVRREDGGDEGF 325 (438)
T ss_dssp CGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSCCGGGCCEEEEEECCSSSCCCC
T ss_pred ccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCCChhhCEEEEEEEEccCCCccc
Confidence 7 679999996 43221 1245555543 3456899999999999999999998443
Q ss_pred -eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeEEeeCCEEec
Q psy14060 214 -KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVYWLKVSSLSD 278 (283)
Q Consensus 214 -~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~~~g~~l~ 278 (283)
.......+.|.... ..+|.+...+....+.+|+.++|.|.+.|. |.| .|.|++||+.+.
T Consensus 326 ~~~~~~~~l~V~~~~------~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~~~ 387 (438)
T 1qgc_4 326 AYWGQGTVVTVSAAK------TTPPSVYPLAPGSAAAAASMVTLGCLVKGYFPEPVTVTWNSGSLSSG 387 (438)
T ss_dssp CSBCCCEEEEECSSC------CBCCEEEEECCCGGGCCSSEEEEEEEEESCBSSCCEEEEGGGTCCSS
T ss_pred eeeCCCEEEEEecCC------CCCCeEEEcCcccccccCCcEEEEEEeccccCCCcEEEEecCCCCCc
Confidence 22233456665310 124555544434456789999999999997 887 999999998764
No 39
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.92 E-value=4.5e-24 Score=178.19 Aligned_cols=208 Identities=14% Similarity=0.135 Sum_probs=139.3
Q ss_pred eeeecCcEEEEEEEccC-c--cceEEeecCC---------------CEEEEEc-----CCEEEEEEccCCCCCCeEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGD-K--EIVRKITATE---------------TTEMEHK-----GKIQERVVDASELDDDGYYAIT 115 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~-~--~i~~~~~~~~---------------~~~~~~~-----~~~~~L~i~~~~~~D~G~Y~C~ 115 (283)
.+.+|+.+.|.|.+.|. | .+ .|..... ++..... .....|.|.+++.+|+|.|+|.
T Consensus 14 ~v~~G~~v~L~C~~~~~~p~~~v-~W~k~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 92 (327)
T 2wng_A 14 SVAAGESAILHCTVTSLIPVGPI-QWFRGAGPARELIYNQKEGHFPRVTTVSESTKRENMDFSISISNITPADAGTYYCV 92 (327)
T ss_dssp EEETTSCEEECCEESCCCSCCCE-EEEESCSTTCEEEEETTSSCCTTEEECC---CTTCCBCCEEECSCCGGGCEEEEEE
T ss_pred EEecCCcEEEEEEccCcCCCceE-EEEECCCCCceEEEEcCCCCcceeeeecccccccCceeEEEEccCccccCeEEEEE
Confidence 47778899999999987 5 33 4443321 2222111 3456799999999999999999
Q ss_pred EEecceee------eeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEeeecCC--EEEEEeCCEecCCCCCeEEEE
Q psy14060 116 ERKYYALS------DLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP--TIKWFREDFPITSSPDFQIHT 184 (283)
Q Consensus 116 a~n~~~~~------~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~--~~~W~k~~~~~~~~~~~~~~~ 184 (283)
+.|..+.. ....+.+ ..+|.+. . ....+..|+.+.|.|.+.+.|.+ .+.|++++..+..........
T Consensus 93 a~n~~~~~~~~~~~~~~~l~V~~~p~~p~i~-~-~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~~~~~~~~ 170 (327)
T 2wng_A 93 KFRKGSPDTEFKSGAGTELSVRAKPSAPVVS-G-PAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDFQTNVDPV 170 (327)
T ss_dssp EEESSTTCEEEEECCCEEEEEEBCCCCCEEE-C-CSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCEEEEEECS
T ss_pred eecCCCcceeEeecCcEEEEEEecCCCceee-c-cccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEccccccccccc
Confidence 99875421 1112222 2233333 2 23567889999999999998766 899999999886432110000
Q ss_pred -e-CC---EEEEEEcCCCCCCCEEEEEEEEeCCcee---EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEE
Q psy14060 185 -F-ST---KSILIMRQVFMEDSGVFAVIAENRGGKA---KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARF 256 (283)
Q Consensus 185 -~-~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~---~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L 256 (283)
. +. .+.|.|.....+|.|.|+|.+.|..+.. .....+.+... .+|.+...+.. +.+|+.+.|
T Consensus 171 ~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~--------~~P~i~~~~~~--~~~G~~v~l 240 (327)
T 2wng_A 171 GESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIR--------VPPTLEVTQQP--VRAENQVNV 240 (327)
T ss_dssp SCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBC--------BCCEEEEEEEC--CSSTTCCEE
T ss_pred cCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccC--------CCCEEEEecCC--cCCCCcEEE
Confidence 0 01 2357777777777899999999987652 33333322211 46777665444 789999999
Q ss_pred EEEEEeeCCC--eeEEeeCCEEecC
Q psy14060 257 DAKISATKPL--DVYWLKVSSLSDV 279 (283)
Q Consensus 257 ~C~~~g~p~~--~v~W~~~g~~l~~ 279 (283)
.|.+.|.|++ .|.|++||+.+..
T Consensus 241 ~C~~~g~~p~~~~v~W~k~g~~l~~ 265 (327)
T 2wng_A 241 TCQVRKFYPQRLQLTWLENGNVSRT 265 (327)
T ss_dssp EEEEEEEBSSCEEEEEEETTEEEEE
T ss_pred EEEEccccCCCcEEEEEECCeEccC
Confidence 9999996544 7999999998753
No 40
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.92 E-value=1.5e-24 Score=180.35 Aligned_cols=221 Identities=8% Similarity=-0.021 Sum_probs=148.6
Q ss_pred CCCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEEE--EEcCCEEEEEEccCCCCCCeEEEEEEEecce---
Q psy14060 47 VPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEM--EHKGKIQERVVDASELDDDGYYAITERKYYA--- 121 (283)
Q Consensus 47 ~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~--~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~--- 121 (283)
.++|.+...+...+.+|+.++|.|.+.+.+....|...+..... ........|.|.+++.+|+|.|+|.+.|...
T Consensus 22 ~~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~ 101 (316)
T 3vh8_G 22 QDKPFLSAWPSAVVPRGGHVTLRCHYRHRFNNFMLYKEDRIHIPIFHGRIFQESFNMSPVTTAHAGNYTCRGSHPHSPTG 101 (316)
T ss_dssp --CCEEEEESCSEEETTSCEEEEEEBTTBCCSEEEEESSCSSSCHHHHCCBSSCEEECSCCGGGCEEEEEEEBCSSSSSS
T ss_pred CCCCEeeccCCCccCCCCCEEEEEEccCCCceEEEEeCCCccceeecCCcceEEEEECCCCcccCeEEEEEEEcCCCCcc
Confidence 34666666666668889999999999987532244433322110 0111345789999999999999999886422
Q ss_pred ---eeeeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEE-eCCEEEEEEc
Q psy14060 122 ---LSDLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT-FSTKSILIMR 194 (283)
Q Consensus 122 ---~~~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~-~~~~~~l~i~ 194 (283)
.+....+.+ ..+|.+...+... +..|+.++|.|.+.+ +.+.+.|+|++..+.......... ......|.|.
T Consensus 102 ~~~~s~~~~l~V~~~~~~p~~~~~~~~~-v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~ 179 (316)
T 3vh8_G 102 WSAPSNPVVIMVTGNHRKPSLLAHPGPL-VKSGERVILQCWSDI-MFEHFFLHKEGISKDPSRLVGQIHDGVSKANFSIG 179 (316)
T ss_dssp BCCCCCCEEEEEECSSCCCEEEEESCSE-EETTCCEEEEEEESS-CCSEEEEEETTCCSCCEEEECEEETTEEEEEEEEC
T ss_pred eecCCCcEEEEEecCCCCCeEEecCCCc-cCCCCeEEEEEcCCC-CCcEEEEEECCCccccceeeeeecCCCceEEEEEC
Confidence 111112222 2356666555443 889999999999954 677999999988764321111111 1134579999
Q ss_pred CCCCCCCEEEEEEEEeCCcee-----EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeE
Q psy14060 195 QVFMEDSGVFAVIAENRGGKA-----KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVY 269 (283)
Q Consensus 195 ~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~ 269 (283)
++..+|+|.|+|.|.|..+.. .....|.|.... .+|.+...+. ..+.+|+.++|.|.+.. |.+.+.
T Consensus 180 ~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~-------~~p~i~~~~~-~~v~~G~~v~L~C~~~~-~~~~~~ 250 (316)
T 3vh8_G 180 PMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPY-------EKPSLSAQPG-PKVQAGESVTLSCSSRS-SYDMYH 250 (316)
T ss_dssp SCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSS-------CCCEEEEESC-SCCCTTSCCEEEEEESS-CCSEEE
T ss_pred CCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCC-------CCCeEEeCCC-CeecCCCcEEEEEECCC-CCcEEE
Confidence 999999999999999987641 344566666421 3566665544 36789999999999974 778999
Q ss_pred EeeCCEEec
Q psy14060 270 WLKVSSLSD 278 (283)
Q Consensus 270 W~~~g~~l~ 278 (283)
|+++|..+.
T Consensus 251 W~k~g~~~~ 259 (316)
T 3vh8_G 251 LSREGGAHE 259 (316)
T ss_dssp EEETTSSCC
T ss_pred EEECCCcCC
Confidence 999997654
No 41
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.92 E-value=4.1e-25 Score=181.30 Aligned_cols=209 Identities=15% Similarity=0.146 Sum_probs=151.6
Q ss_pred eeeecCcEEEEEEEccCccceEEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCe-E
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIVRKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPV-F 136 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~-~ 136 (283)
.+.+|+.++|.|.+.|.-.. ......+......+....|.|.+++.+|+|.|+|.+.|..+. .....+.+..+|. +
T Consensus 15 ~v~~G~~v~L~C~~~~~v~W--~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~ 92 (292)
T 4dkd_C 15 VVKPGATVTLRCVGNGSVEW--DGPPSPHWTLYSDGSSSILSTNNATFQNTGTYRCTEPGDPLGGSAAIHLYVKDPARPW 92 (292)
T ss_dssp EECTTCCEEEEEECSSCCCB--CCCCCSSCEECCBTTEEEEEESSCCGGGCSCEEECCCC----CCEEECCEECCSSCCE
T ss_pred EEcCCCcEEEEEcCCCceEE--ccCCCCceEEeccCceEEEEEcccccccCEEEEEEEccCCCCcceEEEEEEcCccccc
Confidence 46788899999999986321 112233445555556789999999999999999999887653 3334455555554 4
Q ss_pred EecCCceeecCCCcEEEEEEEeeecC--CEEEEEeC-CEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCc
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGDPL--PTIKWFRE-DFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~p~--~~~~W~k~-~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 213 (283)
...+....+..|+.+.|.|.+.+ |. +.+.|+++ +..+....++.+... ..|.|.++..+|+|.|+|.+.|..+
T Consensus 93 ~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a~n~~~ 168 (292)
T 4dkd_C 93 NVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGRPLMRHTNYSFSPW---HGFTIHRAKFIQSQDYQCSALMGGR 168 (292)
T ss_dssp EESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGCCCCSSCCEECCSS---SCCEETTCCGGGCSEEEEEECSTTS
T ss_pred cccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCCccccCCcccccCC---ceEEECCCCHHHCeEEEEEEEeCCC
Confidence 55667788999999999999988 55 78999997 455544444433222 2399999999999999999998877
Q ss_pred eeEE-EEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC-eeEEeeCCEEecC
Q psy14060 214 KAKC-SANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL-DVYWLKVSSLSDV 279 (283)
Q Consensus 214 ~~~~-~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~-~v~W~~~g~~l~~ 279 (283)
.... .+.|.|.... ..+|.+...+....+.+|+.+.|.|.+.+.|.+ .+.|+++|..+..
T Consensus 169 ~~~s~~~~l~V~~~~------~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~~~~~ 230 (292)
T 4dkd_C 169 KVMSISIRLKVQKVI------PGPPALTLVPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNTKLAI 230 (292)
T ss_dssp CEECCCEEEEEECCC------CSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSCCCCC
T ss_pred ceeEEEEEEEEeCCC------CCCCeEEccCCceeEecCCCEEEEEEecCCCCceEEEEeCCCccccc
Confidence 6543 6777777421 127888888877778899999999999987654 6889999876643
No 42
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.92 E-value=1.7e-24 Score=174.70 Aligned_cols=199 Identities=8% Similarity=0.031 Sum_probs=147.2
Q ss_pred eeeecCcEEEEEEEccCccc-e-EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeeeeccCCCCCCeE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEI-V-RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSDLSEQKPAKPPVF 136 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i-~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~p~~ 136 (283)
.+.+|+.+.|.|.+.+.|.. . .|...+.. +. .....|.|.+++.+|+|.|+|.+.|..+.. ...+.+..++ +
T Consensus 12 ~v~~G~~v~l~C~~~~~~~~~~~~W~~~g~~--~~--~~~~~l~i~~~~~~d~G~Y~C~~~~~~~s~-~~~l~v~~~~-~ 85 (262)
T 3rjd_A 12 SVFQEETVTLHCEVLHLPGSSSTQWFLNGTA--TQ--TSTPSYRITSASVNDSGEYRCQRGLSGRSD-PIQLEIHRGW-L 85 (262)
T ss_dssp EEETTCCEEEEEECSSCCCTTCEEEEETTEE--CS--CCSSEEEESSCCGGGCEEEEEEESSSCCCC-CEEEEEECSS-E
T ss_pred EeeCCCeEEEEEECCCCCCCceEEEEECCEE--ee--ccCCeEEEecCCcccCeEEEEEEecCCccc-cEEEEEeccc-e
Confidence 57789999999999988733 2 55543322 11 124578999999999999999998865532 2223333344 3
Q ss_pred EecCCceeecCCCcEEEEEEE-eeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCcee
Q psy14060 137 TKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~-~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
...+....+.+|+.+.|.|.+ .+.|.+.+.|++++..+... .....|.|.++..+|.|.|+|.+.|..+..
T Consensus 86 ~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~--------~~~~~l~i~~~~~~d~G~Y~C~~~n~~~~~ 157 (262)
T 3rjd_A 86 LLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFF--------HWNSNLTILKTNISHNGTYHCSGMGKHRYT 157 (262)
T ss_dssp EEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEEEEEEEESSSEEE
T ss_pred EecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCcccccc--------CCCCeEEEEECChhhCEEEEEEEeCCCCcc
Confidence 344455678899999999999 67778899999999876321 112359999999999999999999999877
Q ss_pred EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCC-C----eeEEeeCCEEecC
Q psy14060 216 KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP-L----DVYWLKVSSLSDV 279 (283)
Q Consensus 216 ~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~-~----~v~W~~~g~~l~~ 279 (283)
...+.|.|.... .+|.+...+ ...+.+|+.+.|.|.+.+.|. | .+.|+++|..+..
T Consensus 158 ~~~~~l~V~~~~-------~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~~~~~~~~~ 218 (262)
T 3rjd_A 158 SAGISVTVKELF-------PAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFYMGSKTLRG 218 (262)
T ss_dssp EECEEEEEECSS-------CCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEEETTEEEEE
T ss_pred ccceEEEeccCC-------CCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEEeCCcEecc
Confidence 777888888631 245555444 566889999999999999876 4 3789999998863
No 43
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.92 E-value=6.8e-25 Score=189.49 Aligned_cols=201 Identities=13% Similarity=0.099 Sum_probs=128.4
Q ss_pred eeeecCcEEEEEEEccCccce-EEeecCCCE----EEE-EcCCEEEEEEccCCCCCCeEEEEEEEecceee-eeeccCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITATETT----EME-HKGKIQERVVDASELDDDGYYAITERKYYALS-DLSEQKPA 131 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~~~~~----~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~~~~ 131 (283)
+|.+|+++.|.|.+.|.|.+. .|+...... ... .......|.|.+++.+|+|.|+|.|.|..+.. ....+.+.
T Consensus 59 ~V~~G~~v~L~C~v~g~P~p~i~W~~~~~~l~~~~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~ 138 (423)
T 3qs7_E 59 EVDVSASITLQVLVDAPGNISCLWVFKHSSLNCQPHFDLQNRGVVSMVILKMTETQAGEYLLFIQSEATNYTILFTVSIR 138 (423)
T ss_dssp EECSSCCEEEEEECSCCSSCEEEEEETTEEECCCCBC-----CEEEEEESSCCSSSCSEEEEEEEC--CEEEEEEEEEEC
T ss_pred EEecCCcEEEEEEEEcCCCCeEEEEECCCccCccceeccccceEEEEEEeecCcccCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 588899999999999988544 443222111 111 12234679999999999999999999998743 23344444
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC---CeEEEEeCCEEEEEEcCCCCCCCEEEEEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP---DFQIHTFSTKSILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~---~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 208 (283)
.+|.+. ...+..+..|+.+.|.|.+.|.|.|.++|++++..+.... ...+..... .+ ...|+|.|.|.|
T Consensus 139 ~~p~~~-~~~p~~~~~~~~~~L~C~a~G~P~P~i~W~k~~~~~~~~~~~~~~~~~~~~~--~l-----~~~d~G~Y~C~A 210 (423)
T 3qs7_E 139 NTLLYT-LRRPYFRKMENQDALVCISESVPEPIVEWVLCDSQGESCKEESPAVVKKEEK--VL-----HELFGTDIRCCA 210 (423)
T ss_dssp -----C-EEEEEEEECSSSSCEEEEEEESSCCEEEEEEC-------------CEEECCS--EE-----CCCCSSCEEEEE
T ss_pred cCcccc-ccCCcEeccCCceEEEEEEeeecCCeEEEEECCCCCccccccccccccccce--EE-----ecccCeEEEEEE
Confidence 444432 1222344567788999999999999999999887543210 001111111 11 578999999999
Q ss_pred EeCCceeEEE-EEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCCeeEEeeCCEEecC
Q psy14060 209 ENRGGKAKCS-ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 209 ~n~~g~~~~~-~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~~v~W~~~g~~l~~ 279 (283)
.|..|..... +.|.|.. +|.+ .+....+.+|+.+.|.|.+.| .|.|.|.|+++|+.+..
T Consensus 211 ~N~~G~~~~~~~~l~V~~----------~p~~--~~~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~~l~~ 271 (423)
T 3qs7_E 211 RNELGRECTRLFTIDLNQ----------TPQT--TLPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKALEE 271 (423)
T ss_dssp ECSSCEEEEECEEEESSS----------CCCS--STTEEEEETTSCEEEEEEEEESSSCCCEEEEESSSBCCG
T ss_pred EcCCCCcceeeEEEEEec----------CCcc--CCCceEEeCCCeEEEEEEEEcCCCCcEEEEEECCEEccc
Confidence 9999876542 4554442 3332 334677899999999999999 67789999999987643
No 44
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.92 E-value=1.3e-23 Score=161.96 Aligned_cols=165 Identities=22% Similarity=0.331 Sum_probs=133.9
Q ss_pred eeeecCcEEEEEEEccCccce-EEeecC--------CCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee-eeecc
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITAT--------ETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALS-DLSEQ 128 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~~--------~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~ 128 (283)
.+.+|+.+.|.|.+.|.|... .|...+ .++.+...++...|.|.+++.+|+|.|+|.+.|..+.. ....+
T Consensus 16 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l 95 (194)
T 2a38_A 16 VVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKATNGSGQATSTAEL 95 (194)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEE
T ss_pred EEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEEcCCceEeEEEEE
Confidence 467788999999999877322 333221 24555556678899999999999999999999987732 22223
Q ss_pred CC---CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEE
Q psy14060 129 KP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFA 205 (283)
Q Consensus 129 ~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 205 (283)
.+ ..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++..+|.|.|+
T Consensus 96 ~v~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 175 (194)
T 2a38_A 96 LVKAETAPPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSSLDFQISQEGDLYSLLIAEAYPEDSGTYS 175 (194)
T ss_dssp EEECCCEEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEEETTEEEEEEEEECGGGCEEEE
T ss_pred EEccCCCCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCCCcEEEEEcCCEEEEEECCCChhcCeEEE
Confidence 22 256777777777889999999999999999999999999999998877888888888888999999999999999
Q ss_pred EEEEeCCceeEEEEEEEE
Q psy14060 206 VIAENRGGKAKCSANLVV 223 (283)
Q Consensus 206 C~a~n~~g~~~~~~~l~v 223 (283)
|.|.|..|.....+.|.|
T Consensus 176 C~a~n~~g~~~~~~~l~V 193 (194)
T 2a38_A 176 VNATNSVGRATSTAELLV 193 (194)
T ss_dssp EEEEETTEEEEEEEEEEE
T ss_pred EEEEeCCCceEEEEEEEE
Confidence 999999999888887776
No 45
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.92 E-value=2e-24 Score=185.06 Aligned_cols=215 Identities=18% Similarity=0.205 Sum_probs=152.0
Q ss_pred eeeecCcEEEEEEEccC-ccce-EEeec--------CCCEEEEEcCCEEEEEEccC-----CCCCCeEEEEEEEecce-e
Q psy14060 59 EIHTAKSQQVQKEKKGD-KEIV-RKITA--------TETTEMEHKGKIQERVVDAS-----ELDDDGYYAITERKYYA-L 122 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~-~~i~-~~~~~--------~~~~~~~~~~~~~~L~i~~~-----~~~D~G~Y~C~a~n~~~-~ 122 (283)
.+.+|+.++|.|.+.+. |... .|... ..+..... ...|.|.++ +.+|+|.|+|.+.+... .
T Consensus 32 ~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~---~~~l~i~~~~~~~~~~~D~G~Y~C~~~~~~~~~ 108 (403)
T 3laf_A 32 VTMRGGNVLLNCSAESDRGVPVIKWKKDGLILALGMDDRKQQLP---NGSLLIQNILHSRHHKPDEGLYQCEASLGDSGS 108 (403)
T ss_dssp EECTTCCEEECCEEECTTCCCEEEEEETTEECCTTSCTTEEECT---TSCEEECSCCCBTTBCSSCEEEEEEEECGGGCE
T ss_pred EEecCCcEEEEEEcCCCCCCceEEEEECCEECccCCcccEEEec---CCcEEEeeeeccCCCCCcceEEEEEEEeCCCcc
Confidence 46678899999999874 4221 23221 22333332 234667766 77899999999986543 2
Q ss_pred --eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCC
Q psy14060 123 --SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMED 200 (283)
Q Consensus 123 --~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 200 (283)
.....+.+..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+................|.|.++..+|
T Consensus 109 ~~s~~~~l~v~~p~~~~~~~~~~~~~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 188 (403)
T 3laf_A 109 IISRTAKVMVAGPLRFLSQTESITAFMGDTVLLKCEVIGDPMPTIHWQKNQQDLNPIPGDSRVVVLPSGALQISRLQPGD 188 (403)
T ss_dssp EECCCEEEEECCCCEECSCCCCEEEETTSCEEECCCEECSSCCEEEEEESSSBCCCCTTCCSEEECTTSCEEECSCCGGG
T ss_pred EEEEEEEEEecCCCccccCCCcEEEEcCCeEEEEEEEcccCCCeEEEEECCEeccccCCceEEEEcCCceEEEccccccc
Confidence 233345555678887777888999999999999999999999999999988753221111111123369999999999
Q ss_pred CEEEEEEEEeCCceeE-EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecC
Q psy14060 201 SGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~~~-~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~ 279 (283)
+|.|+|.+.|..+... ....+.|...... ..++.+...+....+.+|+.+.|.|.+.+.|.+.+.|+++|..+..
T Consensus 189 ~G~Y~C~~~n~~~~~~~~~~~l~v~~~p~~----~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~~~~~~ 264 (403)
T 3laf_A 189 SGVYRCSARNPASTRTGNEAEVRILSDPGL----HRQLYFLQRPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGEEVIQL 264 (403)
T ss_dssp CEEEEEEEECSSCCCBCCCEEEEEECCCCC----CEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCC
T ss_pred CEEEEEEEEcCCCceeccceeEEEecCCCc----ccCceEecCCCceEecCCCcEEEEEEcCCCCCCeEEEEECCeeccC
Confidence 9999999999877633 4466666642100 0112345556677889999999999999999999999999998865
Q ss_pred C
Q psy14060 280 K 280 (283)
Q Consensus 280 ~ 280 (283)
.
T Consensus 265 ~ 265 (403)
T 3laf_A 265 R 265 (403)
T ss_dssp S
T ss_pred C
Confidence 3
No 46
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.92 E-value=8.9e-24 Score=165.05 Aligned_cols=172 Identities=15% Similarity=0.214 Sum_probs=127.3
Q ss_pred CCceeeecCCeeeecCcEEEEEEEcc-Cc--cce-----EEeecCCCEEEEEcC--CEEEEEEccCCCCCCeEEEEEEEe
Q psy14060 49 EPSASGVHGKEIHTAKSQQVQKEKKG-DK--EIV-----RKITATETTEMEHKG--KIQERVVDASELDDDGYYAITERK 118 (283)
Q Consensus 49 ~p~~~~~~~~~v~~g~~v~l~C~~~g-~~--~i~-----~~~~~~~~~~~~~~~--~~~~L~i~~~~~~D~G~Y~C~a~n 118 (283)
.|.|......++.+|+.++|.|.+.+ .| .+. +.+..+.++.+..++ +...|.|.+++.+|+|.|+|.+.|
T Consensus 3 ~p~~~~~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~N 82 (207)
T 3rbs_A 3 DPFTKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQD 82 (207)
T ss_dssp ---CCEEEEEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEEE
T ss_pred CCeeecCCceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEEC
Confidence 45555444456888889999999964 46 333 455556666666544 678899999999999999999988
Q ss_pred cceeeeeeccC--------------------CCCCCeEEecCCceeecCCCcEEEEEEEeee-cCCEEEEEeCCEecCCC
Q psy14060 119 YYALSDLSEQK--------------------PAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLPTIKWFREDFPITSS 177 (283)
Q Consensus 119 ~~~~~~~~~~~--------------------~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~~~~W~k~~~~~~~~ 177 (283)
.........+. ...+|.|...+ ...+.+|+.+.|.|.+.|. |.|.++|+|++..+...
T Consensus 83 g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l~~~ 161 (207)
T 3rbs_A 83 GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREISVD 161 (207)
T ss_dssp TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEECCC
T ss_pred CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEECCCC
Confidence 44322211100 01267776655 4778899999999999998 89999999999998765
Q ss_pred CCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEE
Q psy14060 178 PDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223 (283)
Q Consensus 178 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 223 (283)
.++. ......+|.|.++..+|+|.|+|.|.|..|...+.+.|.+
T Consensus 162 ~~~~--~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~~ 205 (207)
T 3rbs_A 162 EKHD--FKDGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLKLVD 205 (207)
T ss_dssp CCCC--CSSEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEECC
T ss_pred CceE--cCCCEEEEEECCCCcccCEEEEEEEEcCCCEEEEEEEEec
Confidence 4431 2233457999999999999999999999999998888754
No 47
>1z7z_I Intercellular adhesion molecule-1; ICAM-1,kilifi,CD54,human coxsackievirus A21, cryo-electron microscopy,virus-receptor complex, icosahedral virus; HET: NAG NDG; 8.00A {Homo sapiens} SCOP: b.1.1.3 b.1.1.3 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.92 E-value=1.9e-24 Score=188.19 Aligned_cols=228 Identities=10% Similarity=-0.010 Sum_probs=142.3
Q ss_pred ceEEEEEcCCeeee--------eeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccC-c--cce-EEeecC--
Q psy14060 20 LKSRTASSDRSGVS--------TEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGD-K--EIV-RKITAT-- 85 (283)
Q Consensus 20 ~~~~~a~n~~g~~~--------~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~-~--~i~-~~~~~~-- 85 (283)
.+.|.|.|..|... ....+.|...+ ...|.+.. ...+.+|+.+.|.|.+.|. | .+. .|...+
T Consensus 156 ~Y~C~a~n~~g~~~~~~~~~~s~~~~l~v~~~~--~~~p~~~~--~~~v~~G~~v~l~C~~~g~~P~~~~~~~W~~~~~~ 231 (450)
T 1z7z_I 156 NFSCRTELDLRPQGLELFENTSAPYQLQTFVLP--ATPPQLVS--PRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQR 231 (450)
T ss_dssp EEEEEEEEECGGGTSCEEEEECCCEECEECCCC--SSCCEEEC--CSEEETTSEEEEEEEEESCTTGGGCEEEEEETTEE
T ss_pred eEEEEEEcccCCCCceEEeeccCccceeeeccC--CCCCEecC--ceeEEeCCcEEEEEEeeCCCCCCceEEEEeCCCEe
Confidence 46788888877543 33334444331 22333321 1357889999999999998 5 333 333221
Q ss_pred --CCEEEEEcCCEEEEE-EccCCCCCCe--EEEEEEEecceee-eeeccCCC--CCCeEEecCCceeecCCCcEEEEEEE
Q psy14060 86 --ETTEMEHKGKIQERV-VDASELDDDG--YYAITERKYYALS-DLSEQKPA--KPPVFTKKIQPCRAFEQDQARFEVEF 157 (283)
Q Consensus 86 --~~~~~~~~~~~~~L~-i~~~~~~D~G--~Y~C~a~n~~~~~-~~~~~~~~--~~p~~~~~~~~~~~~~g~~v~l~C~~ 157 (283)
.++... +....+. ..+++.+|+| .|+|.+.|..+.. ....+.+. .+|.+.. ....+.+|+.+.|.|.+
T Consensus 232 ~~~~~~~~--~~~~~~~~~~~v~~~d~G~~~Y~C~a~n~~g~~~~~~~l~V~~~~~p~i~~--~~~~v~~G~~v~l~C~~ 307 (450)
T 1z7z_I 232 LNPTVTYG--NDSFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYSFPAPNVIL--TKPEVSEGTEVTVKCEA 307 (450)
T ss_dssp CCCEEEEE--TTEEEEEEEEECCGGGCEEEEEEEEEEETTEEEEEEEEEEEECCCCCEEEE--SCSEEETTCEEEEEEEC
T ss_pred CCceEEec--CCceeEEEEEEeEhhhCCcEEEEEEEccCCccEEEEEEEEEecCCCCeEec--CCeeEeCCCcEEEEEec
Confidence 122222 2222222 2278999999 9999999997742 22233332 2455543 34588999999999999
Q ss_pred eeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCc-e---eEEEEEEEEEeccCCCCCC
Q psy14060 158 DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG-K---AKCSANLVVEEKRQGGRGG 233 (283)
Q Consensus 158 ~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g-~---~~~~~~l~v~~~~~~~~~~ 233 (283)
. |.|.++| +|..+... +....|.|..+..+|.|.|+|.|.|..+ . ....+.|.|..
T Consensus 308 ~--p~p~i~W--~g~~~~~~--------~~~~~L~i~~~~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~V~~-------- 367 (450)
T 1z7z_I 308 H--PRAKVTL--NGVPAQPL--------GPRAQLLLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLY-------- 367 (450)
T ss_dssp ----------------------------CCCCCEEEECCGGGTTCEEEEEEEEEETTEEEEEEEEEECEEEE--------
T ss_pred C--CCCEeEE--CCEEcCCC--------CceEEEEEecCcccCCceEEEEEEcCCCCcccccceeEEEEEec--------
Confidence 7 8899999 66665221 1223599999999999999999997654 3 33557777764
Q ss_pred CCCCeEEecC--CceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEe
Q psy14060 234 VVPPSFLTTI--SSAVINVGQLARFDAKISATKPLDVYWLKVSSLS 277 (283)
Q Consensus 234 ~~~p~~~~~~--~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l 277 (283)
+|.+...+ ....+.+|+.+.|.|.+.|.|.|.+.|+++|..+
T Consensus 368 --~P~~~~~~~p~~~~~~~g~~~~l~C~~~g~P~p~i~W~~~g~~~ 411 (450)
T 1z7z_I 368 --GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFP 411 (450)
T ss_dssp --EEECCSTTSCSEEEEETTCEECCCCCCEEESCCEEEEEETTTEE
T ss_pred --CCceeeccCCCceeEcCCCeEEEEEecccCCCCcEEEEECCccc
Confidence 56665543 4568899999999999999999999999999743
No 48
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.92 E-value=1.9e-22 Score=166.40 Aligned_cols=221 Identities=16% Similarity=0.237 Sum_probs=159.4
Q ss_pred CCceeeecCC-eeeecCcEEEEEEEccCccce-EEe------e-cCCCEEEE-EcCCEEEEEEccCCCCCCeEEEEEEEe
Q psy14060 49 EPSASGVHGK-EIHTAKSQQVQKEKKGDKEIV-RKI------T-ATETTEME-HKGKIQERVVDASELDDDGYYAITERK 118 (283)
Q Consensus 49 ~p~~~~~~~~-~v~~g~~v~l~C~~~g~~~i~-~~~------~-~~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n 118 (283)
.|.|...+.. .+.+|+.+.|.|.+.|.|... .|. . ...++.+. ..++...|.|.+++.+|+|.|+|.+.|
T Consensus 4 ~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n 83 (305)
T 2nzi_A 4 APHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATN 83 (305)
T ss_dssp CCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEEE
T ss_pred CCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEEc
Confidence 3444433322 466788999999999988332 222 2 22345443 345677999999999999999999999
Q ss_pred ccee-eeeeccCCCCCCeEEe-----cCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEE
Q psy14060 119 YYAL-SDLSEQKPAKPPVFTK-----KIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 192 (283)
Q Consensus 119 ~~~~-~~~~~~~~~~~p~~~~-----~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~ 192 (283)
..+. .....+.+..+|.+.. .+....+..|+.+.|.|.+.|.|.+.+.|++++..+....++.+........|.
T Consensus 84 ~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~l~ 163 (305)
T 2nzi_A 84 QGGSVSGTASLEVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLV 163 (305)
T ss_dssp TTEEEEEEEEEEECEEEEECCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSSSSCEEEECSSEEEEE
T ss_pred CCCCccceEEEEEecCCccCCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCCCcEEEEEcCCceEEE
Confidence 9874 3333444444444322 234567888999999999999999999999999988877777777766778899
Q ss_pred EcC-CCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEec----CCceEE------cCCCeEEEEEEEE
Q psy14060 193 MRQ-VFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTT----ISSAVI------NVGQLARFDAKIS 261 (283)
Q Consensus 193 i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~----~~~~~v------~~g~~v~L~C~~~ 261 (283)
|.+ +..+|.|.|+|.|.|..|.......|.|.... .+|..... .....+ ..|....+.|.+.
T Consensus 164 i~~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~P-------~~p~~~~~~~~~~~~v~l~w~~p~~~g~~~i~~y~v~ 236 (305)
T 2nzi_A 164 FPNGVERKDAGFYVVCAKNRFGIDQKTVELDVADVP-------DPPRGVKVSDVSRDSVNLTWTEPASDGGSKITNYIVE 236 (305)
T ss_dssp ETTCCCSTTCEEEEEEEEETTEEEEEEEEEEEEBCC-------CCCEEEEEESCCSSCEEEEEECCSCCSBSCEEEEEEE
T ss_pred EecCCccCccEEEEEEEEeCCCceeeEEEEEEecCC-------CCCCCceeeeccCCEEEEEEcCCccCCCCceeEEEEE
Confidence 999 99999999999999999999888888888632 23332211 111222 2355667788888
Q ss_pred eeCCCeeEEeeCCEE
Q psy14060 262 ATKPLDVYWLKVSSL 276 (283)
Q Consensus 262 g~p~~~v~W~~~g~~ 276 (283)
..+.+...|++.+..
T Consensus 237 ~~~~~~~~w~~~~~~ 251 (305)
T 2nzi_A 237 KCATTAERWLRVGQA 251 (305)
T ss_dssp EEETTSCCEEEEEEE
T ss_pred EecCCCCccEECccc
Confidence 888888899886543
No 49
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.91 E-value=5.2e-24 Score=176.76 Aligned_cols=210 Identities=12% Similarity=0.016 Sum_probs=145.5
Q ss_pred eeecCcEEEEEEEccCccc------eEEeecC-------------------CCEEEEE-----cCCEEEEEEccCCCCCC
Q psy14060 60 IHTAKSQQVQKEKKGDKEI------VRKITAT-------------------ETTEMEH-----KGKIQERVVDASELDDD 109 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i------~~~~~~~-------------------~~~~~~~-----~~~~~~L~i~~~~~~D~ 109 (283)
+.+|++++|.|.+.+.+.. ..|...+ .++.+.. .....+|.|.+++.+|+
T Consensus 12 ~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~ 91 (313)
T 4fqp_A 12 GFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRMFGLRVEDE 91 (313)
T ss_dssp CBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCEEECSCCGGGC
T ss_pred EecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEEEECcCChhhC
Confidence 4578899999999876621 1333221 1222110 01235799999999999
Q ss_pred eEEEEEEEecc-e-eeeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEe-eecCCEEEEEeCCEecCCCCCeEEEEeC
Q psy14060 110 GYYAITERKYY-A-LSDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFD-GDPLPTIKWFREDFPITSSPDFQIHTFS 186 (283)
Q Consensus 110 G~Y~C~a~n~~-~-~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~~~W~k~~~~~~~~~~~~~~~~~ 186 (283)
|.|+|.+.+.. + ......+.+..+|.+........+..++.+.+.|.+. +.|.+.+.|++++..+...........+
T Consensus 92 G~Y~C~v~~~~~~~~~~~~~l~v~~~P~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~~~~~ 171 (313)
T 4fqp_A 92 GNYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPGFLSG 171 (313)
T ss_dssp EEEEEEEECSSSCEEEEEEEECCBBCCEEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEECSSTT
T ss_pred EEEEEEEeeccCcceeeeeeeeeccCCcceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeeeeccc
Confidence 99999876443 3 3344556666778777766667777888899999875 6789999999998765432111110111
Q ss_pred C---EEEEEEcCCCCCCCEEEEEEEEeCCceeEEE--EEEEEEeccCCCCCCCCCCeEEec-CCceEEcCCCeEEEEEEE
Q psy14060 187 T---KSILIMRQVFMEDSGVFAVIAENRGGKAKCS--ANLVVEEKRQGGRGGVVPPSFLTT-ISSAVINVGQLARFDAKI 260 (283)
Q Consensus 187 ~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~v~~~~~~~~~~~~~p~~~~~-~~~~~v~~g~~v~L~C~~ 260 (283)
. .+.|.|......|.|.|+|.|.|..+..... ..|.|. .+|.+... .....+..|+.++|.|.+
T Consensus 172 ~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~----------~~P~v~~~~~~~~~~~~g~~v~l~C~~ 241 (313)
T 4fqp_A 172 TVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVY----------YPPEVSISGYDNNWYLGQNEATLTCDA 241 (313)
T ss_dssp CEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBC----------EEEEEEEECCCSCEETTCCCEEEEEEE
T ss_pred ccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccc----------cCCccccccccceeecCCCeEEEEEEe
Confidence 1 2358899999999999999999987654443 444444 35666543 445567889999999999
Q ss_pred EeeCCC-eeEEeeCCEEecC
Q psy14060 261 SATKPL-DVYWLKVSSLSDV 279 (283)
Q Consensus 261 ~g~p~~-~v~W~~~g~~l~~ 279 (283)
.|+|.| .|+|+++|.++..
T Consensus 242 ~g~P~p~~v~W~~~~~~l~~ 261 (313)
T 4fqp_A 242 RSNPEPTGYNWSTTMGPLPP 261 (313)
T ss_dssp EEESCCCEEEEEETTBSCCT
T ss_pred cCCCCCcEEEEEECCEECCC
Confidence 999999 6999999987643
No 50
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.91 E-value=4.3e-23 Score=179.42 Aligned_cols=248 Identities=10% Similarity=-0.018 Sum_probs=155.0
Q ss_pred ceEEEEEcCCee---eeeeeEEEEeCCCCCCCCCceee-ecCCeeeecCcEEEEEEEccC-cc-ce-EEeecCCCE----
Q psy14060 20 LKSRTASSDRSG---VSTEETKIIDGRKVSVPEPSASG-VHGKEIHTAKSQQVQKEKKGD-KE-IV-RKITATETT---- 88 (283)
Q Consensus 20 ~~~~~a~n~~g~---~~~~~~l~v~~~~~~~~~p~~~~-~~~~~v~~g~~v~l~C~~~g~-~~-i~-~~~~~~~~~---- 88 (283)
.+.|.|.|..|. ......|.|..... ..|.+.. .....+..|+.+.|.|.+.|. |. +. .|.......
T Consensus 93 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~--~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~ 170 (444)
T 1igt_B 93 MYYCARHGGYYAMDYWGQGTTVTVSSAKT--TAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHT 170 (444)
T ss_dssp EEEEEEECSSSCEEEEBCCEEEEECSCCC--BCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEEE
T ss_pred EEEEEEecCCcccccccCcEEEEecCCCC--CCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeEe
Confidence 467888887654 23345677764321 2233332 222235678899999999985 53 23 444332220
Q ss_pred --EEEEcC---CEEEEEEccCCCCCCeEEEEEEEecceee-eeeccC------------------CCCCCeE-EecCCce
Q psy14060 89 --EMEHKG---KIQERVVDASELDDDGYYAITERKYYALS-DLSEQK------------------PAKPPVF-TKKIQPC 143 (283)
Q Consensus 89 --~~~~~~---~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~~------------------~~~~p~~-~~~~~~~ 143 (283)
.....+ ....|.|.++..+| |.|+|.+.|..+.. ....+. +..+|.+ ...+...
T Consensus 171 ~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~~ 249 (444)
T 1igt_B 171 FPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKIK 249 (444)
T ss_dssp CCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCHH
T ss_pred cCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCchh
Confidence 000111 13468999999999 99999999997742 111221 2225554 3333333
Q ss_pred e-ecCCCcEEEEEEEeeec----CCEEEEEeCCEecCCCCCeE-EEEe-C---CEEEEEEcCCCCCCCEEEEEEEEeCCc
Q psy14060 144 R-AFEQDQARFEVEFDGDP----LPTIKWFREDFPITSSPDFQ-IHTF-S---TKSILIMRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 144 ~-~~~g~~v~l~C~~~g~p----~~~~~W~k~~~~~~~~~~~~-~~~~-~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g 213 (283)
. +..|+.+.|.|.+.|.+ .+.+.|+|++..+....... .... + ..+.|.|.++..+|.|.|+|.|.|..+
T Consensus 250 ~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~ 329 (444)
T 1igt_B 250 DVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTLRVVSALPIQHQDWMSGKEFKCKVNNKDL 329 (444)
T ss_dssp HHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSSTTCBCCEEECSSSEEEEEEEECCHHHHHTTCEEEEEEECTTC
T ss_pred heeecCCCcEEEEEEeecccCCCCeEEEEEECCccccCcccccceeCCCCcEEEEEEEEEcHHHhccCCcEEEEEEcCCC
Confidence 3 58899999999999984 36999999998876432211 1111 1 234799999999999999999999988
Q ss_pred eeEEEEEEEE--EeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeEEeeCCEEec
Q psy14060 214 KAKCSANLVV--EEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVYWLKVSSLSD 278 (283)
Q Consensus 214 ~~~~~~~l~v--~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~~~g~~l~ 278 (283)
.......+.+ ... .+|.+...+.......+..++|.|.+.|. |.+ .|.|++||..+.
T Consensus 330 ~~~~~~~v~~~~~~~--------~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 390 (444)
T 1igt_B 330 PAPIERTISKPKGSV--------RAPQVYVLPPPEEEMTKKQVTLTCMVTDFMPEDIYVEWTNNGKTEL 390 (444)
T ss_dssp SSCEEEEEECCCCCC--------BCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred CCceEEEEeccCCCC--------CCCEEEEeCCChHHccCCeEEEEEEEEeeeCCCCEEEEEECCEEcc
Confidence 7633333322 111 46766554433222234459999999994 555 899999999874
No 51
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.91 E-value=1.3e-23 Score=182.13 Aligned_cols=208 Identities=10% Similarity=0.081 Sum_probs=144.9
Q ss_pred eeecCcEEEEEEEccCccc----e-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEE
Q psy14060 60 IHTAKSQQVQKEKKGDKEI----V-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAI 114 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i----~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 114 (283)
+.+|+.++|.|.+.+.+.. . .|.. ...++.+...+....|.|.+++.+|+|.|+|
T Consensus 13 v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 92 (438)
T 1qgc_4 13 VSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSGSRTDFTLTIDPVEADDVATYYC 92 (438)
T ss_dssp ECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred eeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEccCCcEEEEeCCCcCcCCeeEEE
Confidence 6678899999999988741 2 3332 1346666666678899999999999999999
Q ss_pred EEEeccee--e--eeecc-CCCCCCeEEecCCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCCCCe--EEEEe
Q psy14060 115 TERKYYAL--S--DLSEQ-KPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSSPDF--QIHTF 185 (283)
Q Consensus 115 ~a~n~~~~--~--~~~~~-~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~~~~--~~~~~ 185 (283)
.+.|..+. . ....+ ....+|.+...........|+.+.|.|.+.+ .|.+ .+.|+|++..+...... .....
T Consensus 93 ~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~ 172 (438)
T 1qgc_4 93 QQSNEVPLTFGAGTKLDLKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDS 172 (438)
T ss_dssp EECSSTTCCBCCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEEECCCT
T ss_pred EEecCCCccccCceeEEecCCCCCCEEEecCCChhhccCCceEEEEEEccccCCCcEEEEEECCEEcCCCceeccccccC
Confidence 99988652 1 11122 2223666665444334456889999999987 5777 89999999887654111 11000
Q ss_pred --CC---EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEE
Q psy14060 186 --ST---KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKI 260 (283)
Q Consensus 186 --~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~ 260 (283)
+. .+.|.|.++..+|+|.|+|.|.|..+....... +... .++.....+....+.+|+.+.|.|.+
T Consensus 173 ~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~--~~~~--------~~~~~~~~~~~~~v~~G~~v~L~C~~ 242 (438)
T 1qgc_4 173 KDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTSPIVKS--FNRN--------ECEVMLVESGGGLVKPGGSLKLSCTA 242 (438)
T ss_dssp TTCCEEEEEEEEEEHHHHHTCCEEEEEEEETTCSSCEEEE--EETT--------C-CCEEEEECCEEECTTCCEEEEEEE
T ss_pred CCCcEEEEEEEEEeCcccCCCCeEEEEEEecccCCceecc--cccc--------cceeEEecCCceEEecCCcEEEEEEE
Confidence 11 347999999999999999999999877533333 3221 12333444567789999999999999
Q ss_pred EeeC--CCeeEEeeC--CEEe
Q psy14060 261 SATK--PLDVYWLKV--SSLS 277 (283)
Q Consensus 261 ~g~p--~~~v~W~~~--g~~l 277 (283)
.|.| .+.+.|+++ |+.+
T Consensus 243 ~g~p~~~~~v~W~k~~~g~~~ 263 (438)
T 1qgc_4 243 SGFIFNRCAMSWVRQTPEKRL 263 (438)
T ss_dssp ESSCGGGSCEEEEEEETTTEE
T ss_pred cccccCCcEEEEEECCCCCCc
Confidence 9988 568999997 6544
No 52
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.91 E-value=1.8e-22 Score=155.28 Aligned_cols=165 Identities=18% Similarity=0.122 Sum_probs=128.4
Q ss_pred eee-cCcEEEEEEEccCcc--ce-EEeecCCCEEE-EEcCCEEEEEEccCCCCCCeEEEEEEEecceeeeeeccCCCCCC
Q psy14060 60 IHT-AKSQQVQKEKKGDKE--IV-RKITATETTEM-EHKGKIQERVVDASELDDDGYYAITERKYYALSDLSEQKPAKPP 134 (283)
Q Consensus 60 v~~-g~~v~l~C~~~g~~~--i~-~~~~~~~~~~~-~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~p 134 (283)
+.. |+.+.|.|.+.+.+. .. .|...+..... ........|.|.+++.+|+|.|+|.+.|.........+.+..+|
T Consensus 14 v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~l~V~~~p 93 (190)
T 2wv3_A 14 IRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNASNMEYRINKPRAEDSGEYHCVYHFVSAPKANATIEVKAAP 93 (190)
T ss_dssp CCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCCSEEEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEECCC
T ss_pred EccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEeccEEEEEecCCcccCEEEEEEEEeCCcccccEEEEEecCC
Confidence 445 889999999998874 22 33332211100 00114678999999999999999999998223444556666788
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEe--CCEecC---CCCCeEEEEeCCEEEEEEcCCC-CCCCEEEEEEE
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFR--EDFPIT---SSPDFQIHTFSTKSILIMRQVF-MEDSGVFAVIA 208 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k--~~~~~~---~~~~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C~a 208 (283)
.+...+....+..|+.+.|.|.+.|.|.|.+.|++ ++..+. ...++.+...+....|.|.++. .+|.|.|+|.|
T Consensus 94 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C~a 173 (190)
T 2wv3_A 94 DITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEISNSSGRFFIINKENYTELNIVNLQITEDPGEYECNA 173 (190)
T ss_dssp EEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECCCTTSCEEEEECSSEEEEEECSCCTTTSCEEEEEEE
T ss_pred cccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeeecCCCeEEEecCCCeeEEEEEeccccCCCEEEEEEE
Confidence 88888888889999999999999999999999999 777664 3456777776677789999999 79999999999
Q ss_pred EeCCceeEEEEEEEEE
Q psy14060 209 ENRGGKAKCSANLVVE 224 (283)
Q Consensus 209 ~n~~g~~~~~~~l~v~ 224 (283)
.|..|.....+.|.|.
T Consensus 174 ~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 174 TNSIGSASVSTVLRVR 189 (190)
T ss_dssp ECSSCEEEEEEEEEEE
T ss_pred EecCCcceeEEEEEEE
Confidence 9999998888888775
No 53
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.91 E-value=3.3e-26 Score=211.71 Aligned_cols=247 Identities=11% Similarity=0.128 Sum_probs=0.0
Q ss_pred eEEEEEcCCeee--eeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccc--eEEeecC-----------
Q psy14060 21 KSRTASSDRSGV--STEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEI--VRKITAT----------- 85 (283)
Q Consensus 21 ~~~~a~n~~g~~--~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i--~~~~~~~----------- 85 (283)
+.|.|+|..|.. +..+.|.|..++....... . .....+.+|+.++|.|.+.|.|.. ..|....
T Consensus 396 Y~C~a~n~~g~~~~s~~~~l~v~~~P~~~~~~~-~-~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~~~ 473 (772)
T 3v2a_R 396 YTVILTNPISKEKQSHVVSLVVYVPPQIGEKSL-I-SPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQLEEECANEPSQA 473 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEEECCcCeEEEEEEEEEEecCCccccccc-C-CCccccCCCCcEEEEeEeccCCCCcEEEEEEcCCcccccccccc
Confidence 788999998876 4456666665544221111 1 011237788899999999998832 2333210
Q ss_pred ----------------------------CCEEEEE--cCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCC
Q psy14060 86 ----------------------------ETTEMEH--KGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPP 134 (283)
Q Consensus 86 ----------------------------~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p 134 (283)
.+..+.. ......|.|.++ +|+|.|+|.|.|..+. .....+.+..+|
T Consensus 474 ~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~L~i~~~--~d~G~Y~C~a~N~~g~~~~~~~l~V~~~p 551 (772)
T 3v2a_R 474 VSVTNPYPCEEWRSVEDFQGGNKIEVNKNQFALIEGKNKTVSTLVIQAA--NVSALYKCEAVNKVGRGERVISFHVTRGP 551 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccCcCccccccccccccCCCcEEEeccceeeccCcceEEEEEEEeec--ccCeEEEEEEEccccccceeEEEEEECCc
Confidence 0011101 112356777776 7999999999999884 334455565566
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEE--------------------EEeCCEEEEEEc
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQI--------------------HTFSTKSILIMR 194 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~--------------------~~~~~~~~l~i~ 194 (283)
.+...+. ..+.+|+.+.|.|.+.+.|.+.+.|+|++..+........ ........|.|.
T Consensus 552 ~i~~~p~-~~~~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~ 630 (772)
T 3v2a_R 552 EITLQPD-MQPTEQESVSLWCTADRSTFENLTWYKLGPQPLPIHVGELPTPVCKNLDTLWKLNATMFSNSTNDILIMELK 630 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred eeeccCC-cccccCCceEEEEeccCCCCCCcEEEEcCCcccccccCcccccccccccceeeccceeeecCCCceEEEEEC
Confidence 6655443 4577899999999999999999999999876543211111 111123459999
Q ss_pred CCCCCCCEEEEEEEEeCCceeE--EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEee
Q psy14060 195 QVFMEDSGVFAVIAENRGGKAK--CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLK 272 (283)
Q Consensus 195 ~~~~~d~G~Y~C~a~n~~g~~~--~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~ 272 (283)
++..+|+|.|+|.|.|..+... ....+.|... .+|.|...+....+.+|+.+.|.|.+.|.|.|.|.|++
T Consensus 631 ~~~~~d~G~Y~C~a~n~~~~~~~s~~~~l~v~~~--------~~P~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k 702 (772)
T 3v2a_R 631 NASLQDQGDYVCLAQDRKTKKRHCVVRQLTVLER--------VAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFK 702 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCccCCcEEEEEEEeCCCCeEEEEEEeeccccc--------CCCEeecCCCceEEeCCCCEEEEEEeCccCCCeEEEEE
Confidence 9999999999999999655433 2345555432 47888887777889999999999999999999999999
Q ss_pred CCEEecCC
Q psy14060 273 VSSLSDVK 280 (283)
Q Consensus 273 ~g~~l~~~ 280 (283)
||+.+...
T Consensus 703 ~g~~l~~~ 710 (772)
T 3v2a_R 703 DNETLVED 710 (772)
T ss_dssp --------
T ss_pred CCeECcCC
Confidence 99988764
No 54
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.91 E-value=6.4e-24 Score=177.35 Aligned_cols=206 Identities=13% Similarity=0.013 Sum_probs=146.9
Q ss_pred eeeecCcEEEEEEEccC----ccce-EEeec-----------------------CCCEEEE-EcCCEEEEEEccCCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGD----KEIV-RKITA-----------------------TETTEME-HKGKIQERVVDASELDDD 109 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~----~~i~-~~~~~-----------------------~~~~~~~-~~~~~~~L~i~~~~~~D~ 109 (283)
.+.+|+.++|.|.+.+. +... .|... ..++.+. .......|.|.+++.+|+
T Consensus 25 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~ 104 (331)
T 3u83_A 25 YGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFLRPSFTDGTIRLSRLELEDE 104 (331)
T ss_dssp EEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEESSCSSSBCCEEECSCCGGGC
T ss_pred EEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEecccCCCCceEEEcccCcccC
Confidence 47778899999999886 2111 33321 1333322 122345799999999999
Q ss_pred eEEEEE-EEecce-eeeeeccCCCCCCeEEe--cCCceeecCC---CcEEEEEE-EeeecCCEEEEEeCCEecC------
Q psy14060 110 GYYAIT-ERKYYA-LSDLSEQKPAKPPVFTK--KIQPCRAFEQ---DQARFEVE-FDGDPLPTIKWFREDFPIT------ 175 (283)
Q Consensus 110 G~Y~C~-a~n~~~-~~~~~~~~~~~~p~~~~--~~~~~~~~~g---~~v~l~C~-~~g~p~~~~~W~k~~~~~~------ 175 (283)
|.|+|. +.+..+ ......+.+..+|.+.. ......+..| +.+.|.|. ..+.|.+.+.|++++....
T Consensus 105 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~~ 184 (331)
T 3u83_A 105 GVYICEFATFPTGNRESQLNLTVMAKPTNWIEGTQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEIR 184 (331)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEE
T ss_pred cEEEEEEEecCCCccEEEEEEEEecCCcceeecCCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCccccceeE
Confidence 999997 555444 23334455555666533 4555677888 77999998 7888999999999532111
Q ss_pred -CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCe
Q psy14060 176 -SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQL 253 (283)
Q Consensus 176 -~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~ 253 (283)
....+.+ ...|.|..+..+|.|.|+|.+.|..+.....+.|.|.. +|.+.. .+....+.+|+.
T Consensus 185 ~~~~~~~~-----~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~----------~P~~~~~~~~~~~~~~g~~ 249 (331)
T 3u83_A 185 NPNGTVTV-----ISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQY----------EPEVTIEGFDGNWYLQRMD 249 (331)
T ss_dssp CTTSCEEE-----EEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEE----------EEEEEEECCCSCCBTTCCC
T ss_pred CCCCcEEE-----EEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEec----------CCeEEEecCCCceEeCCCe
Confidence 1111111 24689999999999999999999999888888888875 455554 344556889999
Q ss_pred EEEEEEEEeeCCCe-eEEeeCCEEecC
Q psy14060 254 ARFDAKISATKPLD-VYWLKVSSLSDV 279 (283)
Q Consensus 254 v~L~C~~~g~p~~~-v~W~~~g~~l~~ 279 (283)
+.|.|.+.|.|.|. +.|+++|..+..
T Consensus 250 ~~l~C~~~g~p~p~~i~W~~~~~~~~~ 276 (331)
T 3u83_A 250 VKLTCKADANPPATEYHWTTLNGSLPK 276 (331)
T ss_dssp EEEEEEEEEESCCCEEEEEETTBSCCT
T ss_pred EEEEEeCcCCCCCCEEEEEECCCcccc
Confidence 99999999999998 999999987654
No 55
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.91 E-value=1.1e-22 Score=157.20 Aligned_cols=166 Identities=17% Similarity=0.281 Sum_probs=128.9
Q ss_pred eeeecCcEEEEEEEccCccce-EE------ee-cCCCEEEE-EcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeecc
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RK------IT-ATETTEME-HKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQ 128 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~------~~-~~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~ 128 (283)
.+.+|+.+.|.|.+.|.|... .| +. ...++.+. ..++...|.|.+++.+|+|.|+|.+.|..+. .....+
T Consensus 15 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~g~~~~~~~l 94 (197)
T 2j8h_A 15 NVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRATNQGGSVSGTASL 94 (197)
T ss_dssp EEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEEETTEEEEEEEEE
T ss_pred EEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEEECCCceeEEEEE
Confidence 467788999999999987332 22 22 22355544 3456779999999999999999999998774 333334
Q ss_pred CCCCCCeEE-----ecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcC-CCCCCCE
Q psy14060 129 KPAKPPVFT-----KKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQ-VFMEDSG 202 (283)
Q Consensus 129 ~~~~~p~~~-----~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G 202 (283)
.+..+|.+. ..+....+..|+.+.|.|.+.+.|.|.+.|++++..+....++.+........|.|.+ +..+|.|
T Consensus 95 ~V~~~p~~~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G 174 (197)
T 2j8h_A 95 EVEVPAKIHLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNNGHYQVIVTRSFTSLVFPNGVERKDAG 174 (197)
T ss_dssp EEEEEEEECCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSSSSCEEEECSSEEEEECTTCCCGGGCE
T ss_pred EEcCCCcCCCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecCCCEEEEEcCCceEEEEeCCCCcccCE
Confidence 443333332 2224457888999999999999999999999999998877777777777778899999 9999999
Q ss_pred EEEEEEEeCCceeEEEEEEEEE
Q psy14060 203 VFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 203 ~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
.|+|.|.|..|.....+.|.|.
T Consensus 175 ~Y~C~a~N~~g~~~~~~~l~V~ 196 (197)
T 2j8h_A 175 FYVVCAKNRFGIDQKTVELDVA 196 (197)
T ss_dssp EEEEEEEETTEEEEEEEEEEEE
T ss_pred eEEEEEEeCCCcEeEEEEEEEe
Confidence 9999999999998888888775
No 56
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.91 E-value=6e-25 Score=184.30 Aligned_cols=221 Identities=12% Similarity=0.109 Sum_probs=155.1
Q ss_pred CCceeeecCC-eeeecCcEEEEEEEc-------cCccce-EEe--------ecCCCEEEEEcCCEEEEEEccCCCCCCeE
Q psy14060 49 EPSASGVHGK-EIHTAKSQQVQKEKK-------GDKEIV-RKI--------TATETTEMEHKGKIQERVVDASELDDDGY 111 (283)
Q Consensus 49 ~p~~~~~~~~-~v~~g~~v~l~C~~~-------g~~~i~-~~~--------~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 111 (283)
.|.+...+.. .+.+|+.+.|.|.+. +.|... .|. ......++...+ ..|.|.+++.+|+|.
T Consensus 18 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~--~~L~i~~v~~~D~G~ 95 (339)
T 3o4o_C 18 CRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPGEEETRMWAQD--GALWLLPALQEDSGT 95 (339)
T ss_dssp CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSCCSSSCEEEET--TEEEESSBCTTCCEE
T ss_pred hHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCccccccEEeeC--CeEEECCCCcccCEE
Confidence 3444433322 467788999999998 776322 222 111122222222 379999999999999
Q ss_pred EEEEEEeccee-eeeeccCCCCCCeEE--ecCCceeecCCCcEEEEEE-----EeeecCCEEEEEeCCEecCCC-CCeEE
Q psy14060 112 YAITERKYYAL-SDLSEQKPAKPPVFT--KKIQPCRAFEQDQARFEVE-----FDGDPLPTIKWFREDFPITSS-PDFQI 182 (283)
Q Consensus 112 Y~C~a~n~~~~-~~~~~~~~~~~p~~~--~~~~~~~~~~g~~v~l~C~-----~~g~p~~~~~W~k~~~~~~~~-~~~~~ 182 (283)
|+|.+.|..+. .....+.+..++... .......+..|+.+.|.|. +.+.|.+.+.|++++..+... .++.+
T Consensus 96 Y~C~~~n~~g~~~~~~~l~V~~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~~~~~ 175 (339)
T 3o4o_C 96 YVCTTRNASYCDKMSIELRVFENTDAFLPFISYPQILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNEKFLS 175 (339)
T ss_dssp EECCEEETTEEEEEEEEEEEECSCGGGHHHHCEEEEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCSSEEE
T ss_pred EEEEEECCcceEEEEEEEEEEcCCCccccccccceEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCceeEE
Confidence 99999998773 223334333333211 1223347789999999999 788899999999999988654 33332
Q ss_pred EEeCCEEEEEEcCCCCCCCEEEEEEEEeCCc----eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEE
Q psy14060 183 HTFSTKSILIMRQVFMEDSGVFAVIAENRGG----KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDA 258 (283)
Q Consensus 183 ~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C 258 (283)
. .....|.|.++..+|.|.|+|.+.|..| .....+.|.|.... ...+|.+...+....+..|+.+.|.|
T Consensus 176 ~--~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~-----~~~~P~i~~~~~~~~v~~G~~v~L~C 248 (339)
T 3o4o_C 176 V--RGTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKK-----EETIPVIISPLKTISASLGSRLTIPC 248 (339)
T ss_dssp C--TTSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCC-----CCCCCEECCCSCCCCCCCCSCCCCCC
T ss_pred c--CCcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCC-----CCCCCEEecCCceeEeccCCCEEEEE
Confidence 2 2334799999999999999999999877 45666777777531 11367777776777889999999999
Q ss_pred EE---EeeC-CCeeEEeeCCEEec
Q psy14060 259 KI---SATK-PLDVYWLKVSSLSD 278 (283)
Q Consensus 259 ~~---~g~p-~~~v~W~~~g~~l~ 278 (283)
.+ .|.| .+.+.|++||..+.
T Consensus 249 ~~~~~~g~P~~~~v~W~~~g~~~~ 272 (339)
T 3o4o_C 249 KVFLGTGTPLTTMLWWTANDTHIE 272 (339)
T ss_dssp CEEESSSCCSSCEEEEESSSSCSS
T ss_pred EEECCCCCCCCceEEEEECCeecc
Confidence 99 8888 77999999998764
No 57
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.91 E-value=8.3e-24 Score=164.57 Aligned_cols=159 Identities=10% Similarity=0.040 Sum_probs=116.7
Q ss_pred eeeecCcEEEEEE---EccCccce-EEeec-----------------------CCCEEEEEcCCEEEEEEccCCCCCCeE
Q psy14060 59 EIHTAKSQQVQKE---KKGDKEIV-RKITA-----------------------TETTEMEHKGKIQERVVDASELDDDGY 111 (283)
Q Consensus 59 ~v~~g~~v~l~C~---~~g~~~i~-~~~~~-----------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~ 111 (283)
.+.+|+.++|.|. +.+.|++. .|... ..++.+....+...|.|.+++.+|+|.
T Consensus 4 ta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 83 (203)
T 4fa8_A 4 TAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHDGN 83 (203)
T ss_dssp EEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHCeE
Confidence 3678999999995 55666332 33221 223444455678899999999999999
Q ss_pred EEEEEEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC----CCCeEEEEeC
Q psy14060 112 YAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS----SPDFQIHTFS 186 (283)
Q Consensus 112 Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~----~~~~~~~~~~ 186 (283)
|+|.+.|..+. .....+.+..||.+...+....+.+|+.+.|.|.+.|.|.|.++|++++..+.. ..++.+...+
T Consensus 84 Y~C~a~n~~g~~~~~~~l~V~~p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~~~~~~r~~~~~~g 163 (203)
T 4fa8_A 84 YLCRMKLGETEVTKQEHLSVVKPLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAPTAANGGVMKEKDG 163 (203)
T ss_dssp EEEEEEETTEEEEEEEEEEEEEEEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC------------CCEECTTS
T ss_pred EEEEEEcCCCcEEEEEEEEecCCceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCcccccceEEEeCCC
Confidence 99999998884 334455566677777777777889999999999999999999999987655432 2344444445
Q ss_pred CEEEEEEcCCCCCCCEEEEEEEEeCCceeEE
Q psy14060 187 TKSILIMRQVFMEDSGVFAVIAENRGGKAKC 217 (283)
Q Consensus 187 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 217 (283)
....+.+.++..+|+|.|+|.|.|..|....
T Consensus 164 ~l~il~i~~v~~~D~G~YtC~A~N~~G~a~~ 194 (203)
T 4fa8_A 164 SLSVAVDLSLPKPWHLPVTCVGKNDKEEAHG 194 (203)
T ss_dssp CEEEEEEEEECSSCCCCEEEEEESSSCEEEE
T ss_pred CEEEEEECCCCHHHCEEEEEEEEcCCCEEEE
Confidence 5556777889999999999999999998764
No 58
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.91 E-value=1.2e-22 Score=156.68 Aligned_cols=167 Identities=17% Similarity=0.282 Sum_probs=133.7
Q ss_pred eeeecCcEEEEEEEccCcc--ce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCC
Q psy14060 59 EIHTAKSQQVQKEKKGDKE--IV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKP 130 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~--i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~ 130 (283)
.+.+|+.+.|.|.+.|.|. +. ..+....++.+...+....|.|.+++.+|+|.|+|.+.|..+. .....+.+
T Consensus 18 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~v 97 (197)
T 3lcy_A 18 TTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATNEVGEVETSSKLLL 97 (197)
T ss_dssp EEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred EEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEECCCCceeEEEEEEE
Confidence 4677889999999988873 32 3445567778777778889999999999999999999988763 22333334
Q ss_pred CCCCeEEec---CCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCC-CCCEEEEE
Q psy14060 131 AKPPVFTKK---IQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFM-EDSGVFAV 206 (283)
Q Consensus 131 ~~~p~~~~~---~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~-~d~G~Y~C 206 (283)
..+|.+... .....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+........|.|.++.. +|.|.|+|
T Consensus 98 ~~~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~~d~G~Y~C 177 (197)
T 3lcy_A 98 QATPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSENITIENTEHYTHLVMKNVQRKTHAGKYKV 177 (197)
T ss_dssp EEEEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECSSEEEEEESSCCHHHHCEEEEE
T ss_pred EcCCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCCceEEEEcCCEEEEEEccccchhhCceEEE
Confidence 334433321 24456788999999999999999999999999999887788887777778899999995 89999999
Q ss_pred EEEeCCceeEEEEEEEEEe
Q psy14060 207 IAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 207 ~a~n~~g~~~~~~~l~v~~ 225 (283)
.|.|..|.....+.|.|.+
T Consensus 178 ~a~n~~g~~~~~~~l~V~~ 196 (197)
T 3lcy_A 178 QLSNVFGTVDAILDVEIQD 196 (197)
T ss_dssp EEECSSCEEEEEEEEEEEC
T ss_pred EEEcCcCceEEEEEEEEec
Confidence 9999999998888888764
No 59
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.90 E-value=4.9e-23 Score=175.78 Aligned_cols=199 Identities=16% Similarity=0.178 Sum_probs=144.0
Q ss_pred ceEEEEEcCCeeeee---eeEEEEeCCC-CCCCCCceeeecC--CeeeecCcEEEEEEEccCccce-EEeecCC-----C
Q psy14060 20 LKSRTASSDRSGVST---EETKIIDGRK-VSVPEPSASGVHG--KEIHTAKSQQVQKEKKGDKEIV-RKITATE-----T 87 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~---~~~l~v~~~~-~~~~~p~~~~~~~--~~v~~g~~v~l~C~~~g~~~i~-~~~~~~~-----~ 87 (283)
.+.|.|+|..|.... ...+.+.... .....|.+..... ..+.+|+.+.|.|.+.|.|... .|..... .
T Consensus 171 ~Y~C~a~n~~~~~~~~~~~~~~~v~~~~~~~~~~p~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~~~~~~ 250 (384)
T 3kld_A 171 NYTCVVTNTVTNHKVLGPPTPLILRNDGVMGEYEPKIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGKPIARK 250 (384)
T ss_dssp EEEEEEEETTTTEEEECCCEEEEEEEEEECCCEEEEEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCCCCCTT
T ss_pred eEEEEEecccccceeeCCceEEEEccCCcccccCCceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCcccccc
Confidence 367899998776421 1223332110 1111222222111 1356688999999999998433 4443211 1
Q ss_pred EEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEE
Q psy14060 88 TEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIK 166 (283)
Q Consensus 88 ~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~ 166 (283)
... ......|.|.+++.+|+|.|+|.|.|..|. .....+.+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.
T Consensus 251 ~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~P~~~~~~~~~~v~~g~~v~l~C~~~g~P~p~i~ 328 (384)
T 3kld_A 251 ARR--HKSNGILEIPNFQQEDAGSYECVAENSRGKNVAKGQLTFYAQPNWVQIINDIHVAMEESVFWECKANGRPKPTYR 328 (384)
T ss_dssp CEE--CTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCCEEE
T ss_pred cee--cCCCcEEEECCCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCccccCCCceEecCCCCEEEEeECCccCCCeEE
Confidence 121 123457999999999999999999999884 33445566668888888888899999999999999999999999
Q ss_pred EEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 167 WFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 167 W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
|+|++..+....++.+. . ..|.|.++..+|+|.|+|.|.|..|...+++.|.|.
T Consensus 329 W~k~g~~l~~~~~~~~~--~--~~L~i~~v~~~D~G~Y~C~A~N~~G~~~~~a~L~V~ 382 (384)
T 3kld_A 329 WLKNGDPLLTRDRIQIE--Q--GTLNITIVNLSDAGMYQCVAENKHGVIFSSAELSVI 382 (384)
T ss_dssp EEETTEECCCBTTEEEE--T--TEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred EEECCEECCCCccEEEe--C--CEEEEeecChhhCEEEEEEEEeCCceEEeceEEEEe
Confidence 99999998776666542 2 269999999999999999999999999999999875
No 60
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.90 E-value=1.5e-23 Score=176.39 Aligned_cols=213 Identities=11% Similarity=0.120 Sum_probs=136.4
Q ss_pred eeeecCcEEEEEEEccCc----cceEEeec-------------------------CCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKITA-------------------------TETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~~-------------------------~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|+.++|.|.+.|.+ .+ .|... ..|+.+..+ ++...|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (344)
T 1za6_B 11 VVKPGASVKISCKASGYTFTDHAI-HWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSSLRSE 89 (344)
T ss_dssp EECTTCCEEEEEEEESSCTTSSCE-EEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEeCCCcEEEEEEcCCccccccEE-EEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECCCCcc
Confidence 366788999999998863 23 23211 245555432 45789999999999
Q ss_pred CCeEEEEEEEeccee-eeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEecCC----
Q psy14060 108 DDGYYAITERKYYAL-SDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPITS---- 176 (283)
Q Consensus 108 D~G~Y~C~a~n~~~~-~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~~---- 176 (283)
|+|.|+|.+.|..+. .....+.+ ..+|.+........+..|+.+.|.|.+.|. |. +.+.|++++..+..
T Consensus 90 D~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~ 169 (344)
T 1za6_B 90 DTAVYFCTRSLNMAYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGALTSGVHTFP 169 (344)
T ss_dssp GCEEEEEEETTTTCEECCCEEEEECSSCCBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTTTBCTTEEECC
T ss_pred cCEEEEEEEecCcceecCcEEEEEecCCCCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecCCccCceeECC
Confidence 999999999885431 11112222 235555544434456789999999999987 54 79999999875421
Q ss_pred -----CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEec------------cCC--CCCCCCCC
Q psy14060 177 -----SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK------------RQG--GRGGVVPP 237 (283)
Q Consensus 177 -----~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~------------~~~--~~~~~~~p 237 (283)
...+.. .+.|.|..+..+| |.|+|.|.|..+.......+.+... ... ......+|
T Consensus 170 ~~~~~~~~~~~-----~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~~~~~P 243 (344)
T 1za6_B 170 AVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPKSCDKTHTCPPCGGGSSGGGSGGQPREP 243 (344)
T ss_dssp CEECTTSCEEE-----EEEEEEETTHHHH-BCEEEEEEEGGGTEEEEEEECCCCC--------------------CCBCC
T ss_pred CeECCCCCEEE-----EEEEEEcHHHcCC-CcEEEEEEeCCCCccceEeecccccccccccCCCCCCccccccCCCCcCC
Confidence 111111 2368999888878 9999999999876543333221000 000 00011356
Q ss_pred eEEecCCceEEcCCCeEEEEEEEEeeCC--CeeEEeeCCEEec
Q psy14060 238 SFLTTISSAVINVGQLARFDAKISATKP--LDVYWLKVSSLSD 278 (283)
Q Consensus 238 ~~~~~~~~~~v~~g~~v~L~C~~~g~p~--~~v~W~~~g~~l~ 278 (283)
.+...+.......|..+.|.|.+.|.++ +.+.|++||+.+.
T Consensus 244 ~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 286 (344)
T 1za6_B 244 QVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 286 (344)
T ss_dssp EEEEECCCGGGGGSSSEEEEEEEEEEBSSCCEEEEESSSSCCC
T ss_pred EEEEeCCChHhccCCcEEEEEEEeeEECCCeEEEEEECCeECC
Confidence 6655433322335667999999999643 4899999998775
No 61
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.90 E-value=2.3e-24 Score=178.40 Aligned_cols=211 Identities=9% Similarity=0.008 Sum_probs=139.8
Q ss_pred eeeecCcEEEEEEEccCccce--EEeecC-----------------------CCEEEE-EcCCEEEEEEccCCCCCCeEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV--RKITAT-----------------------ETTEME-HKGKIQERVVDASELDDDGYY 112 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~--~~~~~~-----------------------~~~~~~-~~~~~~~L~i~~~~~~D~G~Y 112 (283)
.+.+|++++|.|.+.+.+... .|.... .++.+. ......+|.|.+++.+|+|.|
T Consensus 10 tv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y 89 (308)
T 4fom_A 10 TAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFKNYSLNDATITLHNIGFSDSGKY 89 (308)
T ss_dssp EEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEESCCSSSBCCEEECSCCGGGCEEE
T ss_pred EEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEeeccCCCceEEEEccCCHHHCEEE
Confidence 366788999999987654221 333211 111111 011345799999999999999
Q ss_pred EEEEEecce-e-eeeeccCCCCCCe--EEecCCceeecCCCcEEEEEEE-eeecCCEEEEEeCCEecCCCCCeEE-EEeC
Q psy14060 113 AITERKYYA-L-SDLSEQKPAKPPV--FTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFREDFPITSSPDFQI-HTFS 186 (283)
Q Consensus 113 ~C~a~n~~~-~-~~~~~~~~~~~p~--~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~~~W~k~~~~~~~~~~~~~-~~~~ 186 (283)
+|.+.|... . .....+.+..+|. +...+.......|+.+.|.|.+ .|.|.+.++|++++..+........ ....
T Consensus 90 ~C~a~n~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~~~~~~ 169 (308)
T 4fom_A 90 ICKAVTFPLGNAQSSTTVTVLVEPTVSLIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFPNETAT 169 (308)
T ss_dssp EEEEEETTTEEEEEEEEEEEEBCCEEEEEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECTTSCEE
T ss_pred EEEEeeCCCcceeeeeEEEeeeccccccccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceeeeeccc
Confidence 999988633 2 2222233333333 2334455556678899999986 5789999999999887643210000 0001
Q ss_pred CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEE--EEEEEEeccCCCCCCCCCCeEEecC-CceEEcCCCeEEEEEEEEee
Q psy14060 187 TKSILIMRQVFMEDSGVFAVIAENRGGKAKCS--ANLVVEEKRQGGRGGVVPPSFLTTI-SSAVINVGQLARFDAKISAT 263 (283)
Q Consensus 187 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~v~~~~~~~~~~~~~p~~~~~~-~~~~v~~g~~v~L~C~~~g~ 263 (283)
..+.|.|..+...|.|.|+|.|.|..+..... +.|.|.. +|.+...+ ....+..|+.+.|.|.+.|.
T Consensus 170 ~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~----------~P~~~~~~~~~~~~~~g~~v~l~C~~~g~ 239 (308)
T 4fom_A 170 IISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQY----------APEVSVTGYDGNWFVGRKGVNLKCNADAN 239 (308)
T ss_dssp EEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCE----------EEEECCBCCCSCEETTCCSCEEECCEEEE
T ss_pred ccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEec----------CCeeEEcccceeeeeccccEEEEEEEecC
Confidence 12469999999999999999999987665444 4444443 56555443 34567889999999999999
Q ss_pred CCC-eeEEeeCCEEecC
Q psy14060 264 KPL-DVYWLKVSSLSDV 279 (283)
Q Consensus 264 p~~-~v~W~~~g~~l~~ 279 (283)
|.| .+.|+|+|..+..
T Consensus 240 P~p~~v~W~k~~~~~~~ 256 (308)
T 4fom_A 240 PPPFKSVWSRLDGQWPD 256 (308)
T ss_dssp SCEEEEECCBSSSCCCS
T ss_pred CCCcEEEEEECCeECCC
Confidence 998 6999999877643
No 62
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.90 E-value=9.6e-22 Score=153.61 Aligned_cols=163 Identities=13% Similarity=0.161 Sum_probs=129.4
Q ss_pred cCcEEEEEEEccCc---cce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeee-eeccCCC--
Q psy14060 63 AKSQQVQKEKKGDK---EIV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSD-LSEQKPA-- 131 (283)
Q Consensus 63 g~~v~l~C~~~g~~---~i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~-~~~~~~~-- 131 (283)
++.+.|.|.+.|.+ .+. ..+....++.+...+....|.|.+++.+|+|.|+|.+.|..+... ...+.+.
T Consensus 17 ~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~~~ 96 (212)
T 2r15_A 17 AEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAY 96 (212)
T ss_dssp SSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHH
T ss_pred CceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEeec
Confidence 45789999998853 333 445556778877777888999999999999999999999876422 2222221
Q ss_pred -------------------CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEe-CCEEEE
Q psy14060 132 -------------------KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF-STKSIL 191 (283)
Q Consensus 132 -------------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~-~~~~~l 191 (283)
.++.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+... +....|
T Consensus 97 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L 176 (212)
T 2r15_A 97 DEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQTDHCNLKFEAGRTAYF 176 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEETTTEEEE
T ss_pred cchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccCCCEEEEEcCCCEEEE
Confidence 233333345567889999999999999999999999999999988777777665 566789
Q ss_pred EEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 192 IMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 192 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
.|.++..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 177 ~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 177 TINGVSTADSGKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp EESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEcCcchHHCeEEEEEEEcCCCcEEEEEEEEEEc
Confidence 9999999999999999999999988888888763
No 63
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.90 E-value=6.9e-22 Score=173.32 Aligned_cols=250 Identities=10% Similarity=0.019 Sum_probs=152.0
Q ss_pred ceEEEEEcCCee------eeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccC-cc-c-e-EEeecCCCEE
Q psy14060 20 LKSRTASSDRSG------VSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGD-KE-I-V-RKITATETTE 89 (283)
Q Consensus 20 ~~~~~a~n~~g~------~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~-~~-i-~-~~~~~~~~~~ 89 (283)
.+.|.|.|..|. ......|.|.... ...|.+.......+..|+.+.|.|.+.|. |. . . .|........
T Consensus 94 ~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~~~ 171 (475)
T 1iga_A 94 VYYCARDPYGGGKSEFDYWGQGTLVTVSSAS--PTSPKVFPLSLCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQGVT 171 (475)
T ss_pred EEEEEEeccCCCccceeeecCceEEEeccCC--CcCCeEEecCccccCCCCeEEEEEEEeeecCCCceEEEEcCCCcccc
Confidence 356888887652 2334566666421 12333332222224578899999999987 43 2 3 3432221100
Q ss_pred E------E--EcCC---EEEEEEccCCCCCCeEEEEEEEecceeeeeeccC--C-----------------C-CCCeE-E
Q psy14060 90 M------E--HKGK---IQERVVDASELDDDGYYAITERKYYALSDLSEQK--P-----------------A-KPPVF-T 137 (283)
Q Consensus 90 ~------~--~~~~---~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~~--~-----------------~-~~p~~-~ 137 (283)
. . ..+. ...|.|.++..+|+|.|+|.+.|..+......+. + . .+|.+ .
T Consensus 172 ~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v~~ 251 (475)
T 1iga_A 172 ARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRLSL 251 (475)
T ss_pred eEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEEEE
Confidence 0 0 1111 2358888988899999999999987632211111 1 0 24443 3
Q ss_pred ecCCceeecCCCcEEEEEEEeeecC---CEEEEEeCCEecCCCCCe-EEEE-eC---CEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 138 KKIQPCRAFEQDQARFEVEFDGDPL---PTIKWFREDFPITSSPDF-QIHT-FS---TKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 138 ~~~~~~~~~~g~~v~l~C~~~g~p~---~~~~W~k~~~~~~~~~~~-~~~~-~~---~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
..+....+..|+.+.|.|.+.|.++ +.+.| + +..+...... .... .+ ....|.|.++..+|.|.|+|.|.
T Consensus 252 ~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~d~G~Y~C~a~ 329 (475)
T 1iga_A 252 HRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAA 329 (475)
T ss_pred cCCChHHhccCCceEEEEEEEcccCCCceEEEE-C-CCCcCCccccCceECCCCCEEEEEEEEEchHHhccCCcEEEEEE
Confidence 3333334688999999999998644 58999 4 4333221111 0110 11 23469999999999999999999
Q ss_pred eCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCc-eEEcCCCeEEEEEEEEeeCC--CeeEEeeCCEEecCC
Q psy14060 210 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISS-AVINVGQLARFDAKISATKP--LDVYWLKVSSLSDVK 280 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~-~~v~~g~~v~L~C~~~g~p~--~~v~W~~~g~~l~~~ 280 (283)
|..+.......+.+... ..+|.+...+.. ..+..|+.+.|.|.+.|.++ +.|.|++||+.+...
T Consensus 330 n~~~~~~~~~~v~~~~~-------~~~P~v~~~~~~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~ 396 (475)
T 1iga_A 330 YPESKTPLTATLSKSGN-------TFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPRE 396 (475)
T ss_pred cCCCCCceEEEeecCCC-------CCCCeEEEECCChHHhccCCceEEEEEEeeeECCCCEEEEEECCEECCCC
Confidence 99887654444433111 146666554433 34778999999999998633 489999999988643
No 64
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.90 E-value=1.5e-21 Score=152.79 Aligned_cols=167 Identities=17% Similarity=0.157 Sum_probs=123.6
Q ss_pred eeeecCcEEEEEEEccCccce-EEe------ecCCCEEEE-EcCCEEEEEEccC-CCCCCeEEEEEEEecceee-eeecc
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKI------TATETTEME-HKGKIQERVVDAS-ELDDDGYYAITERKYYALS-DLSEQ 128 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~------~~~~~~~~~-~~~~~~~L~i~~~-~~~D~G~Y~C~a~n~~~~~-~~~~~ 128 (283)
.+.+|+.+.|.|.+.|.|... .|. ......... ..+....|.|.++ +.+|+|.|+|.+.|..+.. ....+
T Consensus 17 ~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a~n~~g~~~~~~~l 96 (212)
T 2yd6_A 17 TGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNNVGEISVSTRL 96 (212)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEEEETTEEEEEEEEE
T ss_pred EEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEEEcCCCcEEEEEEE
Confidence 367788999999999887332 222 222222222 2235678999999 5999999999999988742 22222
Q ss_pred CC-------CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCC---CCeEEEEeCCEEEEEEcCCCC
Q psy14060 129 KP-------AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS---PDFQIHTFSTKSILIMRQVFM 198 (283)
Q Consensus 129 ~~-------~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~ 198 (283)
.+ ...|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+... .++..........|.|.++..
T Consensus 97 ~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~L~i~~~~~ 176 (212)
T 2yd6_A 97 TVLREDQIPRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTSNNNGRIKQLRSESIGALQIEQSEE 176 (212)
T ss_dssp EEECGGGCCTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC------CCEEEEEETTEEEEEECSCCG
T ss_pred EEeccCccCCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCcCCCceEEEEecCCeEEEEEcCCCc
Confidence 22 22367777777788899999999999999999999999999988753 355555556678899999999
Q ss_pred CCCEEEEEEEEeCCceeEEE-EEEEEEe
Q psy14060 199 EDSGVFAVIAENRGGKAKCS-ANLVVEE 225 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g~~~~~-~~l~v~~ 225 (283)
+|.|.|+|.|.|..|...+. +.|.+..
T Consensus 177 ~d~G~Y~C~a~N~~G~~~s~~a~l~~~~ 204 (212)
T 2yd6_A 177 SDQGKYECVATNSAGTRYSAPANLYVRG 204 (212)
T ss_dssp GGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ccCEEEEEEEECCCCccccccccEEEEe
Confidence 99999999999999986544 6777763
No 65
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.90 E-value=1.3e-23 Score=179.59 Aligned_cols=214 Identities=12% Similarity=0.090 Sum_probs=141.8
Q ss_pred eeeecCcEEEEEEEcc-Cccce-EEeecCCCE-----EEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeee--eccC
Q psy14060 59 EIHTAKSQQVQKEKKG-DKEIV-RKITATETT-----EMEHKGKIQERVVDASELDDDGYYAITERKYYALSDL--SEQK 129 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g-~~~i~-~~~~~~~~~-----~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~--~~~~ 129 (283)
.+.+|+.++|.|.+.| .|... .|...+... ..........|.|.+++.+|+|.|+|.+.|..+.... ..+.
T Consensus 17 ~v~~G~~v~l~C~~~~~~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~s~~~~l~ 96 (395)
T 1bih_A 17 LFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSLVFLRPQASDEGHYQCFAETPAGVASSRVISFR 96 (395)
T ss_dssp EEETTSCEEECCCEESCCSSCEEEEEESSSBCCTTTTTEEECTTSCCEEESSCCGGGCEEEEEEEEETTEEEECCCEEEE
T ss_pred EEeCCCEEEEEEEEecCCCCceEEEEECCcCcccccceEEEecCCceEEEecCCCCCCcEEEEEEEeCCCeEEeEEEEEE
Confidence 3677889999999998 55333 444322211 1112223457999999999999999999998774321 1222
Q ss_pred C--CCCCeEEecCCceeecCCCcEEEEEEE-eeecCCEEEEEeCC---EecCC----CCCeEEEEeCCEEEEEEcCCCCC
Q psy14060 130 P--AKPPVFTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFRED---FPITS----SPDFQIHTFSTKSILIMRQVFME 199 (283)
Q Consensus 130 ~--~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~~~W~k~~---~~~~~----~~~~~~~~~~~~~~l~i~~~~~~ 199 (283)
+ ...|.+ .+....+..|+.+.|.|.+ .+.|.+.+.|++++ ..... ..++.... ...|.|.++..+
T Consensus 97 v~~~~~p~~--~~~~~~~~~G~~v~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~ 171 (395)
T 1bih_A 97 KTYLIASPA--KTHEKTPIEGRPFQLDCVLPNAYPKPLITWKKRLSGADPNADVTDFDRRITAGP---DGNLYFTIVTKE 171 (395)
T ss_dssp EEEEECCCC--EEEEECCBTTEEEEECCCCCEEESCCEEEEEEEETTSCGGGCCCCCCTTEEECT---TSCEEEEEECGG
T ss_pred EEEeecCCc--CCcceeeeeCCcEEEEecCCCCCCCCeEEEEecCCCcCcccccccccccEEEcC---CCcEEEEEEeec
Confidence 1 112222 2345667899999999996 78899999999986 22111 22333322 225999999999
Q ss_pred CCE---EEEEEEEeCCceeEEEEEEEEEe---ccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeC
Q psy14060 200 DSG---VFAVIAENRGGKAKCSANLVVEE---KRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKV 273 (283)
Q Consensus 200 d~G---~Y~C~a~n~~g~~~~~~~l~v~~---~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~ 273 (283)
|.| .|+|.+.|..+............ ..........+|.+ .+....+.+|+.+.|.|.+.|.|.+.+.|+++
T Consensus 172 d~G~~~~Y~C~a~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~--~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~ 249 (395)
T 1bih_A 172 DVSDIYKYVCTAKNAAVDEEVVLVEYEIKGVTKDNSGYKGEPVPQY--VSKDMMAKAGDVTMIYCMYGSNPMGYPNYFKN 249 (395)
T ss_dssp GCCSSEEEEEEEECTTCSSCEEEEEEEECCCBCCSSCCCCCCEEEE--ECCSEEEETTSCEEEEEEEECSSCCCCEEEET
T ss_pred cCCCceEEEEEEEecccceEEEeeeEEecccccccccccCCcCcee--cCCceEEECCCcEEEEEEeccCCCCeEEEEEC
Confidence 999 99999999988754433222111 10000000113343 34667899999999999999999999999999
Q ss_pred CEEecC
Q psy14060 274 SSLSDV 279 (283)
Q Consensus 274 g~~l~~ 279 (283)
|+.+..
T Consensus 250 g~~~~~ 255 (395)
T 1bih_A 250 GKDVNG 255 (395)
T ss_dssp TEECCC
T ss_pred CEEcCC
Confidence 998864
No 66
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.90 E-value=2.7e-22 Score=164.41 Aligned_cols=198 Identities=16% Similarity=0.133 Sum_probs=142.9
Q ss_pred ceEEEEEcCCee-eeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-EEeecC--------CCEE
Q psy14060 20 LKSRTASSDRSG-VSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITAT--------ETTE 89 (283)
Q Consensus 20 ~~~~~a~n~~g~-~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~~--------~~~~ 89 (283)
.+.|.|.|..|. .+....|.|..++.....|. ...+.+|+.+.|.|.+.|.|... .|...+ .++.
T Consensus 76 ~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~-----~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~ 150 (291)
T 1qz1_A 76 IYKCVVTAEDGTQSEATVNVKIFQKLMFKNAPT-----PQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFI 150 (291)
T ss_dssp EEEEEEECTTSCEEEEEEEEEEECCSEEEECCS-----SEEEETTSCEEECCEEECSSCCEEEEEETTSCSSTTCCTTEE
T ss_pred EEEEEEEcCCCCeeEEEEEEEeeccccccCCCC-----cccccCCCeEEEEEEeccCCCCEEEEEECCEEcccCCCceEE
Confidence 578999999864 46777888876543222221 12467788999999999988433 333322 2222
Q ss_pred EEEcCCEEEEEEccCCCCCCeEEEEEEEecce-e--eeeeccCCCCCCeEEecCC--ceeecCCCcEEEEEEEeeecCCE
Q psy14060 90 MEHKGKIQERVVDASELDDDGYYAITERKYYA-L--SDLSEQKPAKPPVFTKKIQ--PCRAFEQDQARFEVEFDGDPLPT 164 (283)
Q Consensus 90 ~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~-~--~~~~~~~~~~~p~~~~~~~--~~~~~~g~~v~l~C~~~g~p~~~ 164 (283)
.. ....|.|.+++.+|+|.|+|.+.|..+ . .....+.+..+|.+..... ...+..|+.+.|.|.+.|.|.|.
T Consensus 151 ~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~~~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~ 227 (291)
T 1qz1_A 151 VL---SNNYLQIRGIKKTDEGTYRCEGRILARGEINFKDIQVIVNVPPTVQARQSIVNATANLGQSVTLVCDADGFPEPT 227 (291)
T ss_dssp EC---TTSCEEETTCCGGGCEEEEEEEEEGGGTEEEEEEEEEEEEEEEEEEESCSEEEEETTSCCCEEEEEEEEEESCCE
T ss_pred Ec---cCCcEEEccCccccCeEEEEEEEecCCCceeeEEEEEEEecCCcccccccccccccccCceEEEEEEEEEeCCCc
Confidence 22 224699999999999999999998754 2 2233344445666655433 44678899999999999999999
Q ss_pred EEEEeCCEecCCCCC--eEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 165 IKWFREDFPITSSPD--FQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 165 ~~W~k~~~~~~~~~~--~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+.|++++..+..... ...........|.|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 228 i~W~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 290 (291)
T 1qz1_A 228 MSWTKDGEPIENEEEDDEKHIFSDDSSELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFA 290 (291)
T ss_dssp EEEEETTEECCCC--CCSSEEECTTSCEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEECCEECcCCCCCCcceEEcCCCcEEEEEecChhcCEEEEEEEEeCCCceEEEEEEEEEc
Confidence 999999998876431 1233334456799999999999999999999999998888888864
No 67
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.90 E-value=3.7e-22 Score=164.87 Aligned_cols=197 Identities=13% Similarity=0.151 Sum_probs=143.8
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCC-CCCceeeecCC-eeeecCcEEEEEEEccCccce-EEeecC---------CC
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSV-PEPSASGVHGK-EIHTAKSQQVQKEKKGDKEIV-RKITAT---------ET 87 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~-~~p~~~~~~~~-~v~~g~~v~l~C~~~g~~~i~-~~~~~~---------~~ 87 (283)
.+.|.|+|..|..+....|.|...+... ..|.+...... .+..|+.+.|.|.+.|.|... .|...+ .+
T Consensus 78 ~Y~C~a~n~~g~~~~~~~l~V~~~~~~p~~~p~i~~~~~~~~v~~g~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~~~~~ 157 (304)
T 2yd9_A 78 VYECVAQNSVGEITVHAKLTVLREDQLPSGFPNIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDPSASNGR 157 (304)
T ss_dssp EEEEEEECSSCEECCEEEEEEECGGGCCTTCCEEEECCCCEEEETTSCEEECCEEECSSCCEEEEEETTEECCGGGGTTS
T ss_pred EEEEEEECCCCeEEEEEEEEEeccccCCCCCCeeecCCccEEEeCCCeEEEEEECccCCCCeEEEEECCEECcCCCCcce
Confidence 5789999999999999999998764322 22444433322 366688999999999988433 333221 12
Q ss_pred EEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeee----eeccCC-CCCCeEEecCCceeecCCCcEEEEEEEeeecC
Q psy14060 88 TEMEHKGKIQERVVDASELDDDGYYAITERKYYALSD----LSEQKP-AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPL 162 (283)
Q Consensus 88 ~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~----~~~~~~-~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~ 162 (283)
+... ....|.|.+++.+|+|.|+|.+.|..+... ...+.+ ..+|.+...+....+..|+.+.|.|.+.|.|.
T Consensus 158 ~~~~---~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~~l~v~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~ 234 (304)
T 2yd9_A 158 IKQL---RSGALQIESSEETDQGKYECVATNSAGVRYSSPANLYVRVQNVAPRFSILPMSHEIMPGGNVNITCVAVGSPM 234 (304)
T ss_dssp EEEC---TTSCEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEECCCEEEEEEECCCCBCCCTTCCEEEEEEEEEESC
T ss_pred EEeC---CCeEEEEccCCcccCEEEEEEEEeCCCCEEeccEEEEEEeeccCCcEEecCCceEEcCCCeEEEEEEEeeeCC
Confidence 2222 223799999999999999999999987432 222322 35777777777778899999999999999999
Q ss_pred CEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 163 PTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 163 ~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
|.+.|++++..+.....+. .....|.+.++ +|+|.|+|.|.|..|.....+.|.|..
T Consensus 235 p~v~W~~~~~~l~~~~~~~----~~~~~L~i~~~--~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 291 (304)
T 2yd9_A 235 PYVKWMQGAEDLTPEDDMP----VGRNVLELTDV--KDSANYTCVAMSSLGVIEAVAQITVKS 291 (304)
T ss_dssp CEEEEEETTEECSCSSSCC----BSEEEEEECSC--CSCEEEEEEEEETTEEEEEEEEEC---
T ss_pred CEEEEEECCEECCCccccc----CCcEEEEEccc--ccCEEEEEEEEeCCCcEEEEEEEEEec
Confidence 9999999999887654321 23445777766 699999999999999999999998885
No 68
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.90 E-value=8.2e-24 Score=179.20 Aligned_cols=190 Identities=12% Similarity=0.100 Sum_probs=138.7
Q ss_pred eeecCcEEEEEEEccCccce-EEeecCC--------------------CEEEEE---cCCEEEEEEccCCCCCCeEEEEE
Q psy14060 60 IHTAKSQQVQKEKKGDKEIV-RKITATE--------------------TTEMEH---KGKIQERVVDASELDDDGYYAIT 115 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i~-~~~~~~~--------------------~~~~~~---~~~~~~L~i~~~~~~D~G~Y~C~ 115 (283)
+.+|+.++|.|.+.|.|... .|...+. ++.+.. ......|.|.+++.+|+|.|+|.
T Consensus 6 ~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 85 (363)
T 1wio_A 6 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICE 85 (363)
T ss_dssp EETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEEEEE
T ss_pred EeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEEEEE
Confidence 66788999999998877332 4443322 222111 22456799999999999999999
Q ss_pred EEecceeeeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcC
Q psy14060 116 ERKYYALSDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQ 195 (283)
Q Consensus 116 a~n~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~ 195 (283)
+.|..+...+.... +...+ ...+.+|+.+.|.|.+.+.|.+.+.|++++..+. . ....|.|.+
T Consensus 86 ~~n~~~~~~l~V~~------~~~~~-~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~--------~--~~~~L~i~~ 148 (363)
T 1wio_A 86 VEDQKEEVQLLVFG------LTANS-DTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNI--------Q--GGKTLSVSQ 148 (363)
T ss_dssp ETTEEEEEEEEEEE------EEESS-CSSEESBSCEEEEEECCTTCCCCEEEECSSSCEE--------E--ESSEEEECS
T ss_pred EEECCCcEEEEEEe------CCCCC-ceEEecCCCEEEEEEcCCCCCCeEEEEcCCCccc--------c--cceEEEEee
Confidence 98886533222111 12222 2467899999999999888999999999875431 1 223699999
Q ss_pred CCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-----eCCCeeEE
Q psy14060 196 VFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-----TKPLDVYW 270 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-----~p~~~v~W 270 (283)
+..+|+|.|+|.+.|..+.......+.|.. +|... ....+.+|+.+.|.|.+.+ .|.|.+.|
T Consensus 149 v~~~d~G~Y~C~a~~~~~~~~~~~~l~v~~----------~p~~~---~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W 215 (363)
T 1wio_A 149 LELQDSGTWTCTVLQNQKKVEFKIDIVVLA----------FQKAS---SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWW 215 (363)
T ss_dssp BCGGGCEECEEEEEETTEEEEECCEECEEC----------CSCSE---EEEEEETBCCEEEECCCCCCCCSSCEEEEEEE
T ss_pred CChhcCCEEEEEEecCCCeEEEEEEEEEec----------CCCCC---CceEEecCCEEEEEEEEecccccCCCceeEEE
Confidence 999999999999999877777667777764 22221 3457889999999998887 77889999
Q ss_pred eeCCEEecC
Q psy14060 271 LKVSSLSDV 279 (283)
Q Consensus 271 ~~~g~~l~~ 279 (283)
+++|..+..
T Consensus 216 ~~~g~~~~~ 224 (363)
T 1wio_A 216 QAERASSSK 224 (363)
T ss_dssp EESSCCCCC
T ss_pred ecCCCCccc
Confidence 999987654
No 69
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.89 E-value=2.7e-22 Score=164.36 Aligned_cols=196 Identities=16% Similarity=0.167 Sum_probs=143.6
Q ss_pred ceEEEEEcCCeee-eeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccce-EEeec--------CCCEE
Q psy14060 20 LKSRTASSDRSGV-STEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITA--------TETTE 89 (283)
Q Consensus 20 ~~~~~a~n~~g~~-~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~--------~~~~~ 89 (283)
.+.|.|.|..|.. +....|.|..++.....+. ...+.+|+.+.|.|.+.|.|... .|... ..++.
T Consensus 74 ~Y~C~~~n~~g~~~~~~~~l~v~~~~~~~~~~~-----~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~ 148 (291)
T 2wim_A 74 IYRCQATDAKGQTQEATVVLEIYQKLTFREVVS-----PQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFA 148 (291)
T ss_dssp EEEEEEECSSSCEEEEEEEEEEECCCBCCSCCC-----SEEEETTSCEEECCCCBCSSCCEEEEECC----CBCCCSSEE
T ss_pred EEEEEEecccCceEEEEEEEEecCCcceEeCCC-----ChhhcCCCCEEEEEEEccCCCCEEEEEECCccccccCCceEE
Confidence 5789999998886 5667788877654333222 12367788999999999987332 33322 22333
Q ss_pred EEEcCCEEEEEEccCCCCCCeEEEEEEEeccee---eeeeccCCCCCCeEEecCC--ceeecCCCcEEEEEEEeeecCCE
Q psy14060 90 MEHKGKIQERVVDASELDDDGYYAITERKYYAL---SDLSEQKPAKPPVFTKKIQ--PCRAFEQDQARFEVEFDGDPLPT 164 (283)
Q Consensus 90 ~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~---~~~~~~~~~~~p~~~~~~~--~~~~~~g~~v~l~C~~~g~p~~~ 164 (283)
+.. ...|.|.+++.+|+|.|+|.+.|..+. .....+.+..+|.+..... ...+..|+.+.|.|.+.|.|.|.
T Consensus 149 ~~~---~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~~~~~~~~~v~~~p~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~ 225 (291)
T 2wim_A 149 MLA---NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDIIVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPA 225 (291)
T ss_dssp ECT---TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEEEEEEEBCCCCBCSCSEEECCSSSCCEEEEECBCCCBSCCE
T ss_pred Ecc---CCCEEEEecchhhCEEEEEEEEECCCCeeEEeeEEEEeccCCccccCcccccceecCCCeEEEEEEeecCCCCe
Confidence 322 236999999999999999999987642 2222344445666554433 34677899999999999999999
Q ss_pred EEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 165 IKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 165 ~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+.|++++..+....++.+. .....|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 226 v~W~~~g~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~ 284 (291)
T 2wim_A 226 ISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVFV 284 (291)
T ss_dssp EEEEETTEECCCTTTEEEC--STTCEEEEESCCSTTCEEEEEEEEETTEEEEEEEEEEC--
T ss_pred EEEEECCEECcCCccEEEc--CCccEEEEeeCCcccCEEEEEEEEECCCceeeeEEEEEEE
Confidence 9999999998876665443 2345799999999999999999999999999999999886
No 70
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.89 E-value=5.4e-23 Score=166.64 Aligned_cols=191 Identities=10% Similarity=0.026 Sum_probs=133.9
Q ss_pred eeeecCcEEEEEEEcc-Cccc--e-EEeecCCCE--EEEEcCCEEEEEEcc---CCCCCCeE--EEEEEEeccee-eeee
Q psy14060 59 EIHTAKSQQVQKEKKG-DKEI--V-RKITATETT--EMEHKGKIQERVVDA---SELDDDGY--YAITERKYYAL-SDLS 126 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g-~~~i--~-~~~~~~~~~--~~~~~~~~~~L~i~~---~~~~D~G~--Y~C~a~n~~~~-~~~~ 126 (283)
.+.+|+.++|.|.+.| .|.. . .|...+... .+...+. .|.+.. ++.+|+|. |+|.+.|..+. ....
T Consensus 14 ~v~~G~~v~l~C~~~g~~p~p~~~v~W~k~~~~l~~~~~~~~~--~~~~~~~~~~~~~d~g~g~Y~C~a~n~~~~~~~~~ 91 (265)
T 2oz4_A 14 VLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNPTVTYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQ 91 (265)
T ss_dssp EEETTEEEEEEEEEESCSCGGGCEEEEEETTEECCCEEEECSS--EEEEEEEEEECGGGCEEEEEEEEEEETTEEEEEEE
T ss_pred eEecCCCEEEEEEccCCCCCcceEEEEEeCCEECCceEeeCCC--eEEEEeecccccccCCcceEEEEEecCCCCcEEEE
Confidence 4788999999999998 6621 2 444332211 2223333 333433 37788885 99999999774 2333
Q ss_pred ccCCCC--CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEE
Q psy14060 127 EQKPAK--PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVF 204 (283)
Q Consensus 127 ~~~~~~--~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 204 (283)
.+.+.. +|.+. +....+.+|+.+.|.|.+. |.+.+.| +|..+.... ....|.|..+..+|.|.|
T Consensus 92 ~l~V~~~p~p~~~--~~~~~v~~G~~v~l~C~~~--p~~~i~W--~g~~~~~~~--------~~~~l~i~~~~~~~~g~Y 157 (265)
T 2oz4_A 92 TVTIYSFPAPNVI--LTKPEVSEGTEVTVKCEAH--PRAKVTL--NGVPAQPLG--------PRAQLLLKATPEDNGRSF 157 (265)
T ss_dssp EEEEECCCCCEEE--ESCSEEETTCEEEEEEECC--TTSEEEE--SSCSSSCCS--------SEECCEEECCGGGTTEEE
T ss_pred EEEEeCCCCceee--cCCceecCCCcEEEEEEcc--CCCEEEE--CCEEccCCC--------CcEEEEEccccccCCceE
Confidence 344433 34443 3456678899999999998 8999999 777663321 234588899999999999
Q ss_pred EEEEEeCC-ceeE---EEEEEEEEeccCCCCCCCCCCeEEec--CCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCE
Q psy14060 205 AVIAENRG-GKAK---CSANLVVEEKRQGGRGGVVPPSFLTT--ISSAVINVGQLARFDAKISATKPLDVYWLKVSS 275 (283)
Q Consensus 205 ~C~a~n~~-g~~~---~~~~l~v~~~~~~~~~~~~~p~~~~~--~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~ 275 (283)
+|.+.|.. |... ....|.|.. +|.+... +....+.+|+.+.|.|.+.|.|.|.+.|+++|.
T Consensus 158 ~C~a~n~~~g~~~~~s~~~~l~V~~----------~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 158 SCSATLEVAGQLIHKNQTRELRVLY----------GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp EEEEEEECSSSEEEEEEEEEEEEEE----------EEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTT
T ss_pred EEEEEcCCCCCcccccccEEEEEEe----------CCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCc
Confidence 99998544 6544 556777764 4554433 345688999999999999999999999999987
No 71
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.89 E-value=3.1e-22 Score=153.68 Aligned_cols=162 Identities=13% Similarity=0.217 Sum_probs=124.9
Q ss_pred eeeecCcEEEEEEEccCccceEEe-------ecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee--eeeeccC
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIVRKI-------TATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL--SDLSEQK 129 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~~~~-------~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~--~~~~~~~ 129 (283)
.+.+|+.+.|.|.+.|.|....|. ....++.+...+....|.|.+++.+|+|.|+|.+.|..+. .....+.
T Consensus 13 ~v~~G~~v~L~C~~~~~p~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g~~~~~~~~l~ 92 (189)
T 2v44_A 13 ELSVGESKFFTCTAIGEPESIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKGQTQEATVVLE 92 (189)
T ss_dssp EEETTCCEEEEEEEEECCSEEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTSCEEEEEEEEE
T ss_pred EEecCCcEEEEEEeecCCeeEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCCCcEEEEEEEE
Confidence 467788999999999988422333 2345677777777789999999999999999999998763 3344556
Q ss_pred CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC--CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEE
Q psy14060 130 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS--SPDFQIHTFSTKSILIMRQVFMEDSGVFAVI 207 (283)
Q Consensus 130 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 207 (283)
+..+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+.. ..++.+... ..|.|.++..+|+|.|+|.
T Consensus 93 v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~---~~L~i~~v~~~d~G~Y~C~ 169 (189)
T 2v44_A 93 IYQKLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLAN---NNLQILNINKSDEGIYRCE 169 (189)
T ss_dssp EECCCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CEECCCTTEEECTT---SCEEETTCCGGGCEEEEEE
T ss_pred EecCCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEeccCCCCEEEecC---CcEEEEEcCcccCeEEEEE
Confidence 66678777777778899999999999999999999999999987752 334443322 2699999999999999999
Q ss_pred EEeCCceeEEEEEEEE
Q psy14060 208 AENRGGKAKCSANLVV 223 (283)
Q Consensus 208 a~n~~g~~~~~~~l~v 223 (283)
|.|..+.......+.|
T Consensus 170 a~n~~~~~~~~~~~~v 185 (189)
T 2v44_A 170 GRVEARGEIDFRDIIV 185 (189)
T ss_dssp EEETTTTEEEEEEEEE
T ss_pred EEccccCceeeeeEEE
Confidence 9999876655544444
No 72
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.89 E-value=1.9e-22 Score=171.77 Aligned_cols=201 Identities=17% Similarity=0.211 Sum_probs=146.5
Q ss_pred ceEEEEEcCCeee-----eeeeEEEEeCCCCCCCCCceeeec--CCeeeecCcEEEEEEEccCccce-EEeecCCCEEEE
Q psy14060 20 LKSRTASSDRSGV-----STEETKIIDGRKVSVPEPSASGVH--GKEIHTAKSQQVQKEKKGDKEIV-RKITATETTEME 91 (283)
Q Consensus 20 ~~~~~a~n~~g~~-----~~~~~l~v~~~~~~~~~p~~~~~~--~~~v~~g~~v~l~C~~~g~~~i~-~~~~~~~~~~~~ 91 (283)
.+.|.|.|..|.. +....|.+.........|.+.... ...+..|+.+.|.|.+.|.|... .|..........
T Consensus 172 ~Y~C~~~n~~g~~~~~~~s~~~~l~v~~~~~~~~~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~~~~~ 251 (382)
T 1cs6_A 172 NYSCFATSHIDFITKSVFSKFSQLSLAAEDARQYAPSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGSQTSK 251 (382)
T ss_dssp EEEEEEEEEETTEEEEEECCCEEEEEESCCCCCEEEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSCCSCC
T ss_pred eEEEEEEEccccccceeEccceeeccchhhcccCCCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcccccE
Confidence 3678888877432 223455555432222233333211 22466788999999999988433 444333221111
Q ss_pred EcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeC
Q psy14060 92 HKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRE 170 (283)
Q Consensus 92 ~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~ 170 (283)
.......|.|.+++.+|+|.|+|.+.|..+. .....+.+..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++
T Consensus 252 ~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~ 331 (382)
T 1cs6_A 252 WLSSEPLLHIQNVDFEDEGTYECEAENIKGRDTYQGRIIIHAQPDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRD 331 (382)
T ss_dssp CSBSSSEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEEEEEEECCCCEEEETTCCEEEECEEEEESCCEEEEEET
T ss_pred EecCCcEEEEccCChhhCEEEEEEEEcCCCeEEEEEEEEEecCCCcccCCCccEEcCCCeEEEEEEeeeecCCEEEEEEC
Confidence 1223567999999999999999999999884 334455666688888888888899999999999999999999999999
Q ss_pred CEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 171 DFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 171 ~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
+..+....++.+. . ..|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 332 g~~~~~~~~~~~~--~--~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~ 381 (382)
T 1cs6_A 332 GQPLASQNRIEVS--G--GELRFSKLVLEDSGMYQCVAENKHGTVYASAELTVQ 381 (382)
T ss_dssp TEECCCCSSEEEE--T--TEEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred CEECCCCceEEEE--C--CEEEECcCCcccCEEEEEEEEeCCCeEEEEEEEEEe
Confidence 9998876665542 2 269999999999999999999999999998888875
No 73
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.89 E-value=2.9e-21 Score=151.19 Aligned_cols=173 Identities=18% Similarity=0.233 Sum_probs=129.4
Q ss_pred CCceeeecCC-eeeecCcEEEEEEEccCccce-------EEee-cCCCEEEEE-cCCEEEEEEccCCC-CCCeEEEEEEE
Q psy14060 49 EPSASGVHGK-EIHTAKSQQVQKEKKGDKEIV-------RKIT-ATETTEMEH-KGKIQERVVDASEL-DDDGYYAITER 117 (283)
Q Consensus 49 ~p~~~~~~~~-~v~~g~~v~l~C~~~g~~~i~-------~~~~-~~~~~~~~~-~~~~~~L~i~~~~~-~D~G~Y~C~a~ 117 (283)
.|.+...+.. .+.+|+.+.|.|.+.|.|... ..+. ...++.+.. .++...|.|.+++. +|+|.|+|.+.
T Consensus 6 pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~~ 85 (212)
T 2yd1_A 6 PPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVAE 85 (212)
T ss_dssp CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEEE
T ss_pred CCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEEE
Confidence 3444433333 477888999999999888332 2332 344555543 34568999999999 99999999999
Q ss_pred eccee--eeeeccCCCC-------CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCC-CCeEEEEeCC
Q psy14060 118 KYYAL--SDLSEQKPAK-------PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS-PDFQIHTFST 187 (283)
Q Consensus 118 n~~~~--~~~~~~~~~~-------~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~-~~~~~~~~~~ 187 (283)
|..+. .....+.+.. +|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+. .
T Consensus 86 n~~g~~~~~~~~l~V~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~--~- 162 (212)
T 2yd1_A 86 NGVGDAVSADATLTIYEGDKTPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDMSNPRYSLK--D- 162 (212)
T ss_dssp CSSSCEEEEEEEEEEECTTCSCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCTTSTTEEEE--T-
T ss_pred eCCCCeEEeeEEEEEecccCCCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEcccCCCeEEcc--C-
Confidence 98764 2222232222 377777777788899999999999999999999999999988753 343322 2
Q ss_pred EEEEEEcCCCCCCCEEEEEEEEeCCceeEEE-EEEEEEe
Q psy14060 188 KSILIMRQVFMEDSGVFAVIAENRGGKAKCS-ANLVVEE 225 (283)
Q Consensus 188 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~ 225 (283)
..|.|.++..+|+|.|+|.|.|..|...+. +.|.|..
T Consensus 163 -~~L~i~~v~~~d~G~Y~C~a~N~~G~~~s~~~~l~V~~ 200 (212)
T 2yd1_A 163 -GFLQIENSREEDQGKYECVAENSMGTEHSKATNLYVKV 200 (212)
T ss_dssp -TEEEECSCCGGGCEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred -CeEEEccCChhhCEEEEEEeecCCCceeEEEEEEEEEe
Confidence 269999999999999999999999998765 7888875
No 74
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.89 E-value=1.2e-22 Score=177.16 Aligned_cols=218 Identities=9% Similarity=0.050 Sum_probs=140.1
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|+.++|.|.+.+.+ .+ .|.. ...|+.+..+ +....|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (457)
T 1hzh_H 11 VKKPGASVKVSCQASGYRFSNFVI-HWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSA 89 (457)
T ss_dssp EECTTCCEEECEEEESSCGGGSCE-EEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEecCccccCcEE-EEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCCCcc
Confidence 366788999999998764 22 2221 1245555432 45789999999999
Q ss_pred CCeEEEEEEEecce-------------eeeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeee-cC-CEEEEE
Q psy14060 108 DDGYYAITERKYYA-------------LSDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWF 168 (283)
Q Consensus 108 D~G~Y~C~a~n~~~-------------~~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~ 168 (283)
|+|.|+|.+.|..+ ......+.+ ..+|.+........+..|+.+.|.|.+.|. |. +.+.|+
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 169 (457)
T 1hzh_H 90 DTAVYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWN 169 (457)
T ss_dssp GCEEEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCCCBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEET
T ss_pred cCEEEEEEEecCCccccccccccccceECCcEEEEecCCCCCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEE
Confidence 99999999988753 111112222 225555544444456789999999999986 64 799999
Q ss_pred eCCEecCCCCCeEEEEeCC----EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccC-------CCCCCCCCC
Q psy14060 169 REDFPITSSPDFQIHTFST----KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQ-------GGRGGVVPP 237 (283)
Q Consensus 169 k~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~-------~~~~~~~~p 237 (283)
+++..+...........+. .+.|.|.++..+| |.|+|.+.|..+.......+.+..... ....-..+|
T Consensus 170 k~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p 248 (457)
T 1hzh_H 170 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGP 248 (457)
T ss_dssp TTTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSC
T ss_pred eCCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCc
Confidence 9986542110001111111 2369999999999 999999999877655544444321100 000001245
Q ss_pred eE-EecCCceE-EcCCCeEEEEEEEEeeCCC----eeEEeeCCEEec
Q psy14060 238 SF-LTTISSAV-INVGQLARFDAKISATKPL----DVYWLKVSSLSD 278 (283)
Q Consensus 238 ~~-~~~~~~~~-v~~g~~v~L~C~~~g~p~~----~v~W~~~g~~l~ 278 (283)
.+ ...+.... +.+|+.+.|.|.+.|.|++ .|.|++||+.+.
T Consensus 249 ~v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~ 295 (457)
T 1hzh_H 249 SVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVH 295 (457)
T ss_dssp EEEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEEC
T ss_pred eEEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCcccc
Confidence 54 33333322 6789999999999997653 899999998874
No 75
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.89 E-value=6.2e-23 Score=170.16 Aligned_cols=201 Identities=13% Similarity=0.154 Sum_probs=144.7
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEcc----------Cc--cce-----EEe
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKG----------DK--EIV-----RKI 82 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g----------~~--~i~-----~~~ 82 (283)
.+.|.|+|..|..+....|.|...+.....+ ....+..|+.+.|.|.+.| .| .+. ..+
T Consensus 75 ~Y~C~~~n~~g~~~~~~~l~v~~~~~~~~~~-----~~~~~~~g~~~~l~c~~~~~~l~c~~~~~~p~~~i~W~~~~~~~ 149 (317)
T 2y25_A 75 IYEVILKDDRGKDKSRLKLVDEAFKELMMEV-----CKKIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNGSAI 149 (317)
T ss_dssp CEEEEEESSSCEEEEEECCSTHHHHHHHHHH-----HHHHHTCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEESSSBC
T ss_pred EEEEEEECCCCcEEEEEEEEEecCccccccC-----CceecccCCCeEEEeeccccEEEEEeccCCCCcEEEEEECCEEC
Confidence 5789999999988777666555432110000 0111334455666665554 44 332 233
Q ss_pred ecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeee-eeccC--------------------CCCCCeEEec-C
Q psy14060 83 TATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSD-LSEQK--------------------PAKPPVFTKK-I 140 (283)
Q Consensus 83 ~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~-~~~~~--------------------~~~~p~~~~~-~ 140 (283)
....++.....+....|.|.+++.+|+|.|+|.+.|..+... ...+. ...+|.+... +
T Consensus 150 ~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 229 (317)
T 2y25_A 150 RYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQAYDEAYAEFQRLKQAAIAEKNRARVLGGLP 229 (317)
T ss_dssp CCCSSEEEEECSSEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHHHHHHHHHHHHHHHHHHHHTTTSCEEEEBCC
T ss_pred CCCCCeEEeccCCEEEEEECcCCcccCeeEEEEEEeCCceEEEEEEEeeeeccccchhhcccCCcccCcCCCCcccccCC
Confidence 345667777777788899999999999999999999877322 11111 1224445443 4
Q ss_pred CceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEe-CCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE
Q psy14060 141 QPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF-STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 219 (283)
....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+... +....|.|.++..+|+|.|+|.|.|..|.....+
T Consensus 230 ~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~ 309 (317)
T 2y25_A 230 DVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALASDDHCNLKFEAGRTAYFTINGVSTADSGKYGLVVKNKYGSETSDF 309 (317)
T ss_dssp SEEEEETTSBBCEEEEEECSSCCEEEEEESSSEECCCSSEEECCBTTTEEEEEEBSCCSTTCEEEEEEEEETTEEEEEEE
T ss_pred ccEEEEcCCEEEEEEEEecCCCCEEEEEECCEeCCCCCcEEEEEcCCCEEEEEECCCCHHHCEEEEEEEEeCCCeEEEEE
Confidence 456889999999999999999999999999999987777777655 5667899999999999999999999999998888
Q ss_pred EEEEEe
Q psy14060 220 NLVVEE 225 (283)
Q Consensus 220 ~l~v~~ 225 (283)
.|.|..
T Consensus 310 ~l~V~~ 315 (317)
T 2y25_A 310 TVSVFI 315 (317)
T ss_dssp EEEEEC
T ss_pred EEEEEc
Confidence 888874
No 76
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.89 E-value=5.1e-21 Score=147.70 Aligned_cols=158 Identities=13% Similarity=0.200 Sum_probs=121.7
Q ss_pred eeeecCcEEEEEEEc-cCcc--ce-----EEeecC--CCEEEEEcCC-------EEEEEEccCCCCCCeEEEEEEEecce
Q psy14060 59 EIHTAKSQQVQKEKK-GDKE--IV-----RKITAT--ETTEMEHKGK-------IQERVVDASELDDDGYYAITERKYYA 121 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~-g~~~--i~-----~~~~~~--~~~~~~~~~~-------~~~L~i~~~~~~D~G~Y~C~a~n~~~ 121 (283)
.+.+|+.+.|.|.+. |.|. +. ..+... .++.+..... ...|.|.+++.+|+|.|+|.+.|..+
T Consensus 13 ~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~ 92 (195)
T 2c5d_C 13 TGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTGQYQCLVFLGHQ 92 (195)
T ss_dssp EECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCEEEEEEEEETTE
T ss_pred EEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCcEEEEEEEeCCC
Confidence 466788999999999 8873 32 222222 1233332221 57899999999999999999999876
Q ss_pred e--eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCC-EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCC
Q psy14060 122 L--SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFM 198 (283)
Q Consensus 122 ~--~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 198 (283)
. .....+.+..+|.+...+....+..|+.+.|.|.+.|.|.| .+.|++++..+...... .....|.|.++.
T Consensus 93 ~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~~-----~~~~~L~i~~~~- 166 (195)
T 2c5d_C 93 TFVSQPGYVGLEGLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATAPGH-----GPQRSLHVPGLN- 166 (195)
T ss_dssp EEECCCEEEEECCSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSSTTS-----SCCEEEEECCCS-
T ss_pred ceecccEEEEEecCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCCCCc-----CCCCeEEEcccc-
Confidence 4 22345666778888888888889999999999999999999 99999999988764432 344579999887
Q ss_pred CCCEEEEEEEEeCCceeE-EEEEEEE
Q psy14060 199 EDSGVFAVIAENRGGKAK-CSANLVV 223 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g~~~-~~~~l~v 223 (283)
|+|.|+|.|.|..|... ..+.|.|
T Consensus 167 -d~G~Y~C~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 167 -KTSSFSCEAHNAKGVTTSRTATITV 191 (195)
T ss_dssp -SCEEEEEEEEETTEEEECCCEEEEE
T ss_pred -cCceEEEEEEcCCCceEEEEEEEEE
Confidence 78999999999999875 5777776
No 77
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.89 E-value=2.8e-23 Score=192.09 Aligned_cols=236 Identities=17% Similarity=0.219 Sum_probs=65.0
Q ss_pred ceEEEEEcCCeeeeee-eEEEEeCCCCCCCCCceeeecC--CeeeecCcEEEEEEEccCc--cce-EEeecCCC------
Q psy14060 20 LKSRTASSDRSGVSTE-ETKIIDGRKVSVPEPSASGVHG--KEIHTAKSQQVQKEKKGDK--EIV-RKITATET------ 87 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~-~~l~v~~~~~~~~~p~~~~~~~--~~v~~g~~v~l~C~~~g~~--~i~-~~~~~~~~------ 87 (283)
.+.|.|.+..+..... ..+.+...+ .+.+..... ..+.+|+.+.|.|.+.+.+ .+. .|...+..
T Consensus 197 ~Y~C~~~~~~~~~~s~~~~~~v~~~~----~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~W~~~~~~~~~~~~ 272 (772)
T 3v2a_R 197 MVFCEAKINDESYQSIMYIVVVVGYR----IYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKL 272 (772)
T ss_dssp EEEEEEEETTEEEECCEEEEEEECCC----EEEEEEECCSCEEEETTCCEEEEEEEEECTTCCCEEEEECC--------C
T ss_pred EEEEEEEECCceEEEEEEEEEEecCc----cceeeeCCCCceEEecCCcEEEEEEEecCCCCceeEEEecCCccCCCcee
Confidence 4788888865544332 334443321 122222222 2477899999999999743 322 33322211
Q ss_pred EEE--------EEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecC---CceeecCCCcEEEEE
Q psy14060 88 TEM--------EHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKI---QPCRAFEQDQARFEV 155 (283)
Q Consensus 88 ~~~--------~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~---~~~~~~~g~~v~l~C 155 (283)
... ........|.|.+++.+|+|.|+|.+.|..+. .....+.+..+|.+.... ....+..|+.+.|.|
T Consensus 273 ~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~v~~G~~v~l~C 352 (772)
T 3v2a_R 273 VNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHEKPFVAFGSGMESLVEATVGERVRIPA 352 (772)
T ss_dssp EEEEC-----CCCEEEEEEEEESSCCSTTCSEEEEEEECSSCEEEEEEEEEEECCCC-----------------------
T ss_pred eeccccccccccceEEEEEEEECcCCcCCCeEEEEEEEcCCcceeEEEEEEEeCCCeeEeccCCCCcEEEcCCCcEEEEE
Confidence 110 01113568999999999999999999988763 333445555566544332 345688899999999
Q ss_pred EEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEE--EEEEEEeccCCCCCC
Q psy14060 156 EFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCS--ANLVVEEKRQGGRGG 233 (283)
Q Consensus 156 ~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~--~~l~v~~~~~~~~~~ 233 (283)
.+.+.|.+.+.|++++..+..... +. ....|.|.++..+|+|.|+|.+.|..|....+ +.|.|..
T Consensus 353 ~~~~~p~~~v~W~~~g~~l~~~~~--~~---~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~s~~~~l~v~~-------- 419 (772)
T 3v2a_R 353 KYLGYPPPEIKWYKNGIPLESNHT--IK---AGHVLTIMEVSERDTGNYTVILTNPISKEKQSHVVSLVVYV-------- 419 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEeeeCCCeEEEEECCEeCCCCce--Ec---cceeEEEecCChhcCceEEEEEEECCcCeEEEEEEEEEEec--------
Confidence 999999999999999988765322 11 23569999999999999999999998875443 4555543
Q ss_pred CCCCeEEecC---CceEEcCCCeEEEEEEEEeeCCCe-eEEeeCC
Q psy14060 234 VVPPSFLTTI---SSAVINVGQLARFDAKISATKPLD-VYWLKVS 274 (283)
Q Consensus 234 ~~~p~~~~~~---~~~~v~~g~~v~L~C~~~g~p~~~-v~W~~~g 274 (283)
+|.+.... ....+.+|+.+.|.|.+.+.|.|. +.|+++|
T Consensus 420 --~P~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~ 462 (772)
T 3v2a_R 420 --PPQIGEKSLISPVDSYQYGTTQTLTCTVYAIPPPHHIHWYWQL 462 (772)
T ss_dssp ---------------------------------------------
T ss_pred --CCcccccccCCCccccCCCCcEEEEeEeccCCCCcEEEEEEcC
Confidence 55553321 112478999999999999999996 9999974
No 78
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.89 E-value=1.3e-21 Score=160.13 Aligned_cols=198 Identities=13% Similarity=0.073 Sum_probs=139.5
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeee-cCCeeeecCcEEEEEEEccCcc---ce------EEeecCCCEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGV-HGKEIHTAKSQQVQKEKKGDKE---IV------RKITATETTE 89 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~v~~g~~v~l~C~~~g~~~---i~------~~~~~~~~~~ 89 (283)
.+.|.|.|..|..+....|.|..++.. +... ....+.+|+.+.|.|.+.+.+. +. ..+....++.
T Consensus 65 ~Y~C~~~~~~~~~~~~~~l~V~~~~~~-----~~~~~~~~~v~~g~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~ 139 (289)
T 3ejj_X 65 TYRCTELEDPMAGSTTIHLYVKDPAHS-----WNLLAQEVTVVEGQEAVLPCLITDPALKDSVSLMREGGRQVLRKTVYF 139 (289)
T ss_dssp EEEEECCC-----CEEEEEEECCSSCS-----EEESCSEEEEETTSCEEECEEESCGGGGGSEEEEEGGGEECCTTCCEE
T ss_pred EEEEEEeccCCcceeEEEEEEeCCCcc-----eecccceEEEecCCceEeEEEccCCCcceEEEEEecCCeecCCCccEE
Confidence 378999999999899999999886542 1111 1224667889999999998772 32 2223344555
Q ss_pred EEEcCCEEEEEEccCCCCCCeEEEEEEEecc-ee-eeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEee-ecC
Q psy14060 90 MEHKGKIQERVVDASELDDDGYYAITERKYY-AL-SDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPL 162 (283)
Q Consensus 90 ~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~-~~-~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~ 162 (283)
+.. ...|.|.+++.+|+|.|+|.+.+.. +. .....+.+ ..+|.+...+....+..|+.+.|.|.+.+ .|.
T Consensus 140 ~~~---~~~L~i~~v~~~d~G~Y~C~a~~~~~~~~~~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~~~l~C~~~~~~p~ 216 (289)
T 3ejj_X 140 FSP---WRGFIIRKAKVLDSNTYVCKTMVNGRESTSTGIWLKVNRVHPEPPQIKLEPSKLVRIRGEAAQIVCSATNAEVG 216 (289)
T ss_dssp EET---TTEEEESSCCGGGCEEEEEEEEETTEEEECCCEEEEEESSCCCCCEEEEESSSEECCSSSCEEEEEEEEESSSC
T ss_pred ECC---CCCEEEeecccccCEEEEEEEEeCCCccccccEEEEEEECCCCCCeEEecCCceEEEeCCcEEEEEEeCCCCCc
Confidence 442 2358999999999999999998443 32 22222322 25788888888888889999999999998 688
Q ss_pred CEEEEEeCCEecCCCCCeEEEE--eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 163 PTIKWFREDFPITSSPDFQIHT--FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 163 ~~~~W~k~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+.+.|++++..+.......... ......|.|.++..+|.|.|+|.|.|..|...+++.|.+..
T Consensus 217 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~s~~L~~~~ 281 (289)
T 3ejj_X 217 FNVILKRGDTKLEIPLNSDFQDNYYKKVRALSLNAVDFQDAGIYSCVASNDVGTRTATMNFQVVE 281 (289)
T ss_dssp CEEEEEETTEECCCCEEEEECSSSEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEEECC-
T ss_pred eEEEEEECCEEeeccCCcccccceEEeeEEEEEEeecccCCEEEEEEEEcCCCCccccEEEEEEe
Confidence 9999999999886532211100 01145799999999999999999999999999999888764
No 79
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.88 E-value=3.8e-21 Score=148.10 Aligned_cols=142 Identities=25% Similarity=0.474 Sum_probs=122.9
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC--CeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP--DFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ++.+........|.|.++..+|+|.|+|.+.
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 83 (194)
T 2a38_A 4 QAPTFTQPLQSVVVLEGSTATFEAHISGFPVPEVSWFRDGQVISTSTLPGVQISFSDGRAKLTIPAVTKANSGRYSLKAT 83 (194)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEESSSBCCTTTSTTCEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeEEccCCceEEECCCEEEEEEEEEecCCCEEEEEECCEEcccccCCceEEEeCCCEEEEEECCCCcccCEEEEEEEE
Confidence 46788888888999999999999999999999999999998887643 5666667778899999999999999999999
Q ss_pred eCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 210 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
|..+.......+.|.... .+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|..+...
T Consensus 84 n~~~~~~~~~~l~v~~~~-------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~ 147 (194)
T 2a38_A 84 NGSGQATSTAELLVKAET-------APPNFVQRLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDGAEIQSS 147 (194)
T ss_dssp ETTEEEEEEEEEEEECCC-------EEEEEEECCCCEEECTTEEEEEEEEEEEESCCEEEEEETTEECCCS
T ss_pred cCCceEeEEEEEEEccCC-------CCCEEEeCCccEEEcCCCEEEEEEEEEEecCCeEEEEECCEECCCC
Confidence 999988888888887421 3577777777888999999999999999999999999999988653
No 80
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.88 E-value=2.4e-21 Score=169.01 Aligned_cols=249 Identities=11% Similarity=0.073 Sum_probs=147.0
Q ss_pred ceEEEEEcCCe------------eeeeeeEEEEeCCCCCCCCCceeee-cCCeeeecCcEEEEEEEccC-cc-ce-EEee
Q psy14060 20 LKSRTASSDRS------------GVSTEETKIIDGRKVSVPEPSASGV-HGKEIHTAKSQQVQKEKKGD-KE-IV-RKIT 83 (283)
Q Consensus 20 ~~~~~a~n~~g------------~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~v~~g~~v~l~C~~~g~-~~-i~-~~~~ 83 (283)
.+.|.|.|..| .......|.|...+ ...|.+... ....+.+|+.++|.|.+.|. |. +. .|..
T Consensus 93 ~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~--~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k 170 (457)
T 1hzh_H 93 VYYCARVGPYSWDDSPQDNYYMDVWGKGTTVIVSSAS--TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS 170 (457)
T ss_dssp EEEEEECCCCCSSCCTTTTCSCCBCCCCEEEEECSCC--CBCCEEEEECCCSCCCTTCCEEEEEEEESBBSCCCEEEETT
T ss_pred EEEEEEecCCccccccccccccceECCcEEEEecCCC--CCCCeEEecCccccccCCCcEEEEEEEeEEeCCCeEEEEEe
Confidence 46788988876 22344566776532 123333322 22336678899999999987 43 33 4443
Q ss_pred cCCC-----E-EEEEcCC----EEEEEEccCCCCCCeEEEEEEEecceeee-eeccCC-----------------CCCCe
Q psy14060 84 ATET-----T-EMEHKGK----IQERVVDASELDDDGYYAITERKYYALSD-LSEQKP-----------------AKPPV 135 (283)
Q Consensus 84 ~~~~-----~-~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~-~~~~~~-----------------~~~p~ 135 (283)
.+.. . .....++ ...|.|.++..+| |.|+|.+.|..+... ...+.+ ..+|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d-G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~p~ 249 (457)
T 1hzh_H 171 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKAEPKSCDKTHTCPPCPAPELLGGPS 249 (457)
T ss_dssp TTBCTTEEEEEEEECTTSCEEEEEEEEECSGGGGT-SCCEEEEEEGGGTEEEEEECCCCCSCSSCSCCSCCCCCCSSSCE
T ss_pred CCEeccceEcCceECCCCCEEEEEEEEecccccCC-ceEEEEEEeCCCCcceeEEecccCCCcccccCCCCCccccCCce
Confidence 3311 0 1111111 2479999999999 999999999876321 111221 12455
Q ss_pred E-EecCCcee-ecCCCcEEEEEEEeeecCC----EEEEEeCCEecCCCCCeEE-EEeCCEEE-EEEcCCCCCC---CEEE
Q psy14060 136 F-TKKIQPCR-AFEQDQARFEVEFDGDPLP----TIKWFREDFPITSSPDFQI-HTFSTKSI-LIMRQVFMED---SGVF 204 (283)
Q Consensus 136 ~-~~~~~~~~-~~~g~~v~l~C~~~g~p~~----~~~W~k~~~~~~~~~~~~~-~~~~~~~~-l~i~~~~~~d---~G~Y 204 (283)
+ ...+.... +..|+.+.|.|.+.|.|++ .+.|+|++..+........ ........ .....+...| .|.|
T Consensus 250 v~~~~p~~~~~~~~G~~v~L~C~~~g~~p~p~~~~i~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~G~Y 329 (457)
T 1hzh_H 250 VFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEY 329 (457)
T ss_dssp EEEECCCHHHHHCTTSCCCEEEEEECCCTTCCCCEEEEEETTEEECCCEEEEEEECTTSCEEEEEEECCCHHHHHHTCCE
T ss_pred EEeECcCchhhcccCCceEEEEEEEcccCCCCceEEEEEeCCccccccccccceecCCCcEEEEEEEEECHHHccCCCcE
Confidence 4 33333332 6789999999999987543 9999999988754321111 11111111 1111244555 9999
Q ss_pred EEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCc-eEEcCCCeEEEEEEEEeeCCC--eeEEeeCCEEec
Q psy14060 205 AVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISS-AVINVGQLARFDAKISATKPL--DVYWLKVSSLSD 278 (283)
Q Consensus 205 ~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~-~~v~~g~~v~L~C~~~g~p~~--~v~W~~~g~~l~ 278 (283)
+|.|.|..+.......+.+... ...+|.+...+.. ..+..|+ +.|.|.+.|.+++ .|.|++||+.+.
T Consensus 330 ~C~a~n~~~~~~~~~~v~~~~~------~~~~P~v~~~~~~~~~~~~~~-~~l~C~~~g~~p~~~~v~W~k~g~~l~ 399 (457)
T 1hzh_H 330 KCKVSNKALPAPIEKTISKAKG------QPREPQVYTLPPSRDELTKNQ-VSLTCLVKGFYPSDIAVEWESNGQPEN 399 (457)
T ss_dssp EEEEECTTSSSCEEEEECCCCC------CCBCCEEEEECCCGGGGGSSE-EEEEEEEEEEBSSCCEEEEEETTEECC
T ss_pred EEEEeCCCCCCcceEEEEcccC------CCCCCeEEEECCCccccCCCc-EEEEEEEEeEECCCCEEEEEECCEECc
Confidence 9999987655433333332000 0136766654433 2344555 9999999997554 899999999885
No 81
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.88 E-value=8.4e-22 Score=168.01 Aligned_cols=190 Identities=17% Similarity=0.176 Sum_probs=138.5
Q ss_pred cceEEEEEcCCeee-ee---eeEEEEeCCCCC--CCCCceeeecCCeeeecCcEEEEEEEccCccce-EEeec-------
Q psy14060 19 ILKSRTASSDRSGV-ST---EETKIIDGRKVS--VPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIV-RKITA------- 84 (283)
Q Consensus 19 ~~~~~~a~n~~g~~-~~---~~~l~v~~~~~~--~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~------- 84 (283)
=.+.|.|.|..+.. .. ...|.|..+... ...|.+.. ....+.+|+.+.|.|.+.|.|... .|...
T Consensus 178 G~Y~C~~~n~~~~~~~~~~~~~~l~v~~~~~~~~p~~~~~~~-~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~ 256 (388)
T 2v5m_A 178 KSYQCRTKHRLTGETRLSATKGRLVITEPISSSAPRTPALVQ-KPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRK 256 (388)
T ss_dssp CCEEEEEEETTTCCEEECSSCBCEEEECCCSCEEEECCSSCC-CCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCE
T ss_pred eeEEEEeccCCCCceeeccccceEEEecCCcCCCCcCccccC-CceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCccc
Confidence 35788899876443 21 235666654221 11111111 112377789999999999887332 33322
Q ss_pred -----CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEe
Q psy14060 85 -----TETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFD 158 (283)
Q Consensus 85 -----~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~ 158 (283)
..++... ...|.|.+++.+|+|.|+|.+.|..+. .....+.+..+|.+...+....+..|+.+.|.|.+.
T Consensus 257 ~~~~~~~~~~~~----~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~ 332 (388)
T 2v5m_A 257 QAVVLNDRVKQV----SGTLIIKDAVVEDSGKYLCVVNNSVGGESVETVLTVTAPLSAKIDPPTQTVDFGRPAVFTCQYT 332 (388)
T ss_dssp EECCCSSSEEEE----TTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEEESSEEEECTTSCEEEEEEEE
T ss_pred ccccccCceecc----cCEEEECcCCHHHCeEEEEEEecCCCceeEEEEEEEeCCCccccCCCcEEecCCCCEEEEEEec
Confidence 2222211 237999999999999999999999884 334455666677777777888899999999999999
Q ss_pred eecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEE
Q psy14060 159 GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223 (283)
Q Consensus 159 g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 223 (283)
|.|.+.+.|++++..+.... ..|.|.++..+|+|.|+|.|.|..|.....+.|.|
T Consensus 333 g~p~p~i~W~~~g~~i~~~~----------~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 333 GNPIKTVSWMKDGKAIGHSE----------SVLRIESVKKEDKGMYQCFVRNDRESAEASAELKL 387 (388)
T ss_dssp EECCCEEEEEETTEECSCCS----------SEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEE
T ss_pred cccCCeEEEEECCEECccCC----------CEEEEecCChhhCEEEEEEEEcCCCcEEEEEEEEe
Confidence 99999999999999886532 36999999999999999999999999988888775
No 82
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.88 E-value=1e-21 Score=168.19 Aligned_cols=203 Identities=13% Similarity=0.108 Sum_probs=147.4
Q ss_pred cceEEEEEcCCeee---eeeeEEEEeCCCC-CCCCCceeee----cCCeeeecCcEEEEEEEccCccce-EEeecCC---
Q psy14060 19 ILKSRTASSDRSGV---STEETKIIDGRKV-SVPEPSASGV----HGKEIHTAKSQQVQKEKKGDKEIV-RKITATE--- 86 (283)
Q Consensus 19 ~~~~~~a~n~~g~~---~~~~~l~v~~~~~-~~~~p~~~~~----~~~~v~~g~~v~l~C~~~g~~~i~-~~~~~~~--- 86 (283)
=.+.|.|.|..|.. +....+.|...+. ....|.+... ....+..|+.+.|.|.+.|.|... .|...+.
T Consensus 185 G~Y~C~a~n~~~~~~~~~~~~~l~v~~~~~~~~~~p~~~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~ 264 (404)
T 3p3y_A 185 TDYSCNARFHFTHTIQQKNPFTLKVLTTRGVAERTPSFMYPQGTASSQMVLRGMDLLLECIASGVPTPDIAWYKKGGDLP 264 (404)
T ss_dssp SCBEEEEECTTTCCEEECCCBCEEEECCSCCCCCCCCBSSSCSSEEEEEEETTSCEEEECCBCCSSCCEEEEEETTBCCC
T ss_pred cceEEEEEeccccceeccCceeEEEeccCCccccCCccccccCCCCCceEecCCCEEEEEEECCCCCCcEEEEECCEECC
Confidence 35889999988764 3345666665433 2223333221 112367788999999999988433 4443222
Q ss_pred --CEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCC
Q psy14060 87 --TTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP 163 (283)
Q Consensus 87 --~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~ 163 (283)
...... ....|.|.+++.+|+|.|+|.+.|..+. .....+.+..+|.+...+....+..|+.+.|.|.+.|.|.+
T Consensus 265 ~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~p~~~~~~~~~~v~~g~~~~l~C~~~g~p~p 342 (404)
T 3p3y_A 265 SDKAKFEN--FNKALRITNVSEEDSGEYFCLASNKMGSIRHTISVRVKAAPYWLDEPKNLILAPGEDGRLVCRANGNPKP 342 (404)
T ss_dssp TTTEEEEG--GGTEEEESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEEEEEEEECCCCEEECTTCCEEEECEEEEESCC
T ss_pred CCcccccc--cCceEEEccCCHhHCEEEEEEEEeCCCcEEEEEEEEEeCCCeeeccCCcceeecCCcEEEEEEccccCCC
Confidence 122221 2347999999999999999999999874 34445666678888888888899999999999999999999
Q ss_pred EEEEEeCCEecCCCCC-eEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 164 TIKWFREDFPITSSPD-FQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 164 ~~~W~k~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
.+.|++++..+..... ......+ ..|.|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 343 ~v~W~~~g~~~~~~~~~~~~~~~~--~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 343 TVQWMVNGEPLQSAPPNPNREVAG--DTIIFRDTQISSRAVYQCNTSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EEEEEETTEEGGGSCCCTTEEEET--TEEEESSCCSSCCCEEEEEEEETTEEEEEEEEEEEC-
T ss_pred ceEEEECCEecCCCCCCceEEecC--CEEEEeecCHHHCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 9999999998865431 1122222 2699999999999999999999999999988888753
No 83
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.88 E-value=1.2e-21 Score=160.56 Aligned_cols=194 Identities=11% Similarity=-0.012 Sum_probs=138.2
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCcc-ce-EE-ee------cCCCEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKE-IV-RK-IT------ATETTEM 90 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~-i~-~~-~~------~~~~~~~ 90 (283)
.+.|.|.| |. +....|.|..++.....+ ....+.+|+.+.|.|.+.+ |. .. .| .. ...++..
T Consensus 71 ~Y~C~~~n--g~-~~~~~l~V~~~~~~~~~~-----~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~~l~~~~~~~~ 141 (290)
T 2o26_X 71 TYTCSNSN--GL-TSSIYVFVRDPAKLFLVG-----LPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGKSLPTDLTFVP 141 (290)
T ss_dssp EEEEEESS--SC-EEEEEEEEECSSCCBCCC-----CCEEEETTSCEEECCCBSC-CSCEEEEEEETTSCCCCTTCEEEE
T ss_pred EEEEEeeC--Cc-cEEEEEEEeCCCcccccc-----cceEEecCCeEEEeCcCCC-CCCceEEEEeCCCcCCCCCCceee
Confidence 46899999 54 777888888765432211 1123667889999999996 54 33 34 22 2223333
Q ss_pred EEcCCEEEEEEccCCCCCCe-EEEEEEEecceeee--eeccC----CCCCCeEEecCCceeecCCCcEEEEEEEeeecCC
Q psy14060 91 EHKGKIQERVVDASELDDDG-YYAITERKYYALSD--LSEQK----PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP 163 (283)
Q Consensus 91 ~~~~~~~~L~i~~~~~~D~G-~Y~C~a~n~~~~~~--~~~~~----~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~ 163 (283)
.. ...|.|.+++.+|+| .|+|.+.|..+... ...+. ...+|.+...+....+..|+.+.|.|.+.|.|.|
T Consensus 142 ~~---~~~L~i~~v~~~d~G~~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p 218 (290)
T 2o26_X 142 NP---KAGITIKNVKRAYHRLCVRCAAQRDGTWLHSDKFTLKVREAIKAIPVVSVPETSHLLKKGDTFTVVCTIKDVSTS 218 (290)
T ss_dssp ET---TTEEEEESCCGGGTTCEEEEEEEETTEEEECCCEEEEEECCCCSCCEEECSCSBCCCCTTCCEEEEEEEEESSTT
T ss_pred CC---CCCEEEecccHHHCCCEEEEEEEECCceEEeEEEEEEEEeCCCCCCccccCCCcceEecCCcEEEEEEEecCCcc
Confidence 32 236899999999999 99999999865422 12222 3468888777777789999999999999999998
Q ss_pred E-EEEEeCCEec----CCCCCeEEE---EeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 164 T-IKWFREDFPI----TSSPDFQIH---TFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 164 ~-~~W~k~~~~~----~~~~~~~~~---~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
. +.|++++..+ .......+. .......|.|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 219 ~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 288 (290)
T 2o26_X 219 VNSMWLKMNPQPQHIAQVKHNSWHRGDFNYERQETLTISSARVDDSGVFMCYANNTFGSANVTTTLKVVE 288 (290)
T ss_dssp CEEEEEEESSSEEECCCEECCEEEEETTEEEEEEEEEESSCCSSSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred eeEEEecCCCCCccceeecccccccCceeeEEEEEEEEcCCCcccCeEEEEEEeCCCCcEEEEEEEEEEe
Confidence 5 9999998763 322222222 112345799999999999999999999999998888888764
No 84
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.88 E-value=7.1e-21 Score=146.24 Aligned_cols=162 Identities=15% Similarity=0.140 Sum_probs=123.5
Q ss_pred eeeecCcEEEEEEEccCc-cce-EEee--------cCCCEEEEE-cCCEEEEEEccCCCCCCeEEEEEEEecce--eeee
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EIV-RKIT--------ATETTEMEH-KGKIQERVVDASELDDDGYYAITERKYYA--LSDL 125 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i~-~~~~--------~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~--~~~~ 125 (283)
.+.+|+.+.|.|.+.+.+ ... .|.. ...++.+.. ......|.|.+++.+|+|.|+|.+.|..+ ....
T Consensus 13 ~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~ 92 (191)
T 1epf_A 13 EISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVVTAEDGTQSEAT 92 (191)
T ss_dssp EEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEETTTEEEEEE
T ss_pred EEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEEEcCCCcceEEE
Confidence 477788999999999876 332 3333 233444432 25678999999999999999999999873 3334
Q ss_pred eccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCC--CCeEEEEeCCEEEEEEcCCCCCCCEE
Q psy14060 126 SEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS--PDFQIHTFSTKSILIMRQVFMEDSGV 203 (283)
Q Consensus 126 ~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~ 203 (283)
..+.+..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+... ..|.|.++..+|+|.
T Consensus 93 ~~l~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~ 169 (191)
T 1epf_A 93 VNVKIFQKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSN---NYLQIRGIKKTDEGT 169 (191)
T ss_dssp EEEEEECCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGGGCCTTEEECTT---SCEEETTCCGGGCEE
T ss_pred EEEEeecCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeeccCCceEEEecC---CeEEECCCChhhCEE
Confidence 4556667888888888888999999999999999999999999999988642 23333222 259999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEE
Q psy14060 204 FAVIAENRGGKAKCSANLVV 223 (283)
Q Consensus 204 Y~C~a~n~~g~~~~~~~l~v 223 (283)
|+|.|.|..+.......+.|
T Consensus 170 Y~C~a~n~~~~~~~~~~i~v 189 (191)
T 1epf_A 170 YRCEGRILARGEINFKDIQV 189 (191)
T ss_dssp EEEEEEEGGGTEEEEEEEEE
T ss_pred EEEEEEEecceeEEEEEEEE
Confidence 99999999876555554444
No 85
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.88 E-value=2.5e-21 Score=168.25 Aligned_cols=219 Identities=8% Similarity=0.047 Sum_probs=140.0
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|+.++|.|.+.+.+ .+ .|.. ...|+.+... ++...|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (444)
T 1igt_B 11 LVQPGGSLKLSCATSGFTFSDYYM-YWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRLKSE 89 (444)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCE-EEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCCEEEEEEcCCCccCCceE-EEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCCCHH
Confidence 467788999999998763 22 2221 1235555432 35789999999999
Q ss_pred CCeEEEEEEEeccee----eeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCC
Q psy14060 108 DDGYYAITERKYYAL----SDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSS 177 (283)
Q Consensus 108 D~G~Y~C~a~n~~~~----~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~ 177 (283)
|+|.|.|.+.|..+. .....+.+ ..+|.+........+..|+.+.|.|.+.|. |.| .+.|++++..+...
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~ 169 (444)
T 1igt_B 90 DTAMYYCARHGGYYAMDYWGQGTTVTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVH 169 (444)
T ss_dssp GCEEEEEEEECSSSCEEEEBCCEEEEECSCCCBCCEEEEECCCSSCCCSSCEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred HCEEEEEEEecCCcccccccCcEEEEecCCCCCCCceeEecccccCCCCCcEEEEEEEcceeCCCcEEEEecCCCCCCeE
Confidence 999999999986431 11112222 234554433333345789999999999985 776 99999998763210
Q ss_pred CCeEEEEeC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEecc--------CCCCCCCCCCeE-EecCCc
Q psy14060 178 PDFQIHTFS---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKR--------QGGRGGVVPPSF-LTTISS 245 (283)
Q Consensus 178 ~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~--------~~~~~~~~~p~~-~~~~~~ 245 (283)
........+ ....|.|..+..+| |.|+|.|.|..+.......+.+.... ........+|.+ ..++..
T Consensus 170 ~~~~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~p~v~~~~p~~ 248 (444)
T 1igt_B 170 TFPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPRGPTIKPCPPCKCPAPNLLGGPSVFIFPPKI 248 (444)
T ss_dssp ECCCEEETTEEEEEEEEEECSTTTTT-SCCEEEEEETTTTEEEEEECCCCCCSCCCCCCCSCCCSCCCCCCEEEEECCCH
T ss_pred ecCccccCCcEEEEEEEEEchhhcCC-CeEEEEEEeCCCCcceEEEeccCCCCcccCCccccCCcccCCCceEEecCCch
Confidence 000000111 12468999999899 99999999999876554444331000 000001125555 333333
Q ss_pred eE-EcCCCeEEEEEEEEeeC----CCeeEEeeCCEEecC
Q psy14060 246 AV-INVGQLARFDAKISATK----PLDVYWLKVSSLSDV 279 (283)
Q Consensus 246 ~~-v~~g~~v~L~C~~~g~p----~~~v~W~~~g~~l~~ 279 (283)
.. +.+|+.+.|.|.+.|.| .+.|.|+++|..+..
T Consensus 249 ~~~~~~G~~~~L~C~~~g~~~~p~~~~v~W~k~~~~~~~ 287 (444)
T 1igt_B 249 KDVLMISLSPIVTCVVVDVSEDDPDVQISWFVNNVEVHT 287 (444)
T ss_dssp HHHHCTTSCCEEEEEEEEECTTCCCCEEEEEETTEECSS
T ss_pred hheeecCCCcEEEEEEeecccCCCCeEEEEEECCccccC
Confidence 33 58999999999999984 358999999988753
No 86
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.88 E-value=1.9e-21 Score=160.76 Aligned_cols=200 Identities=15% Similarity=0.150 Sum_probs=137.7
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCC------CCCceee--ecCCeeeecCcEEEEEEEc-cCccce-------EEee
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSV------PEPSASG--VHGKEIHTAKSQQVQKEKK-GDKEIV-------RKIT 83 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~------~~p~~~~--~~~~~v~~g~~v~l~C~~~-g~~~i~-------~~~~ 83 (283)
.+.|.|.|..|... ...+.|....... ..|.+.. .....+.+|+.+.|.|.+. +.|... ..+.
T Consensus 72 ~Y~C~~~n~~g~~~-s~~l~v~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~~~~i~ 150 (312)
T 2y23_A 72 IYSCDVTDTDGIAS-SYLIDEEELKRLLALSHEHKFPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIF 150 (312)
T ss_dssp EEEEEESSSCCCCE-EEEECHHHHHHHHHHHHHHHSCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEETTEEEC
T ss_pred EEEEEEEeCCCcEE-EEEEEEeeeeeeecccccCCCCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEECCEECe
Confidence 47899999888554 4555554311000 0122221 1123477788999999999 777332 3444
Q ss_pred cCCCEEEEEc--CCEEEEEEccCCCCCCeEEEEEEEecceeeee-ecc-------------------CCCCCCeEEecCC
Q psy14060 84 ATETTEMEHK--GKIQERVVDASELDDDGYYAITERKYYALSDL-SEQ-------------------KPAKPPVFTKKIQ 141 (283)
Q Consensus 84 ~~~~~~~~~~--~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~-~~~-------------------~~~~~p~~~~~~~ 141 (283)
...++.+... +....|.|.+++.+|+|.|+|.+.+....... ..+ ....+|.+.....
T Consensus 151 ~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 230 (312)
T 2y23_A 151 EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQDGKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYLS 230 (312)
T ss_dssp SSSSCEEEEETTTTEEEEEESCCCGGGCEEEEEEEESSSCEEEEEEEECTHHHHHHHHHHHHHHHHHHHHHSSEEEEEEE
T ss_pred eCCcEEEEEccCCCEEEEEEccCCcccCEeEEEEEEeCCceEEEEEEEcchhhhhhcccccccccchhhccCCceeecce
Confidence 4555555543 56778999999999999999998775442211 111 0112465554333
Q ss_pred ceeecCCCcEEEEEEEeeecCC-EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEE
Q psy14060 142 PCRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSAN 220 (283)
Q Consensus 142 ~~~~~~g~~v~l~C~~~g~p~~-~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 220 (283)
..+..|+.+.|.|.+.+.|.+ .+.|++++..+....++.+. .....|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 231 -~~v~~G~~~~l~C~~~~~p~~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~I~~v~~~d~G~Y~C~a~N~~G~~~~~~~ 307 (312)
T 2y23_A 231 -WEVTGECNVLLKCKVANIKKETHIVWYKDEREISVDEKHDFK--DGICTLLITEFSKKDAGIYEVILKDDRGKDKSRLK 307 (312)
T ss_dssp -EEEETTTEEEEEEEEESCCSSCEEEEEETTEEEEEECCC------CEEEEEECSCSGGGCEEEEEEEESTTCCEEEEEE
T ss_pred -EEEeCCCEEEEEEEEcCCCCCCEEEEeeCCEECCCCCcEEEE--CCEEEEEECcCCHHHCEEEEEEEEcCCCceeeeeE
Confidence 678899999999999999888 99999999988755554443 34568999999999999999999999999988888
Q ss_pred EEE
Q psy14060 221 LVV 223 (283)
Q Consensus 221 l~v 223 (283)
|.+
T Consensus 308 l~i 310 (312)
T 2y23_A 308 LVD 310 (312)
T ss_dssp ECS
T ss_pred EEe
Confidence 764
No 87
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.87 E-value=4e-21 Score=147.65 Aligned_cols=161 Identities=19% Similarity=0.247 Sum_probs=123.5
Q ss_pred eeecCcEEEEEEEccCccce-------EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCC
Q psy14060 60 IHTAKSQQVQKEKKGDKEIV-------RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPA 131 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i~-------~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~ 131 (283)
+.+|+.+.|.|.+.|.|... ..+....++.+.. ....|.|.+++.+|+|.|+|.+.|..+. .....+.+.
T Consensus 16 v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~--~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~l~V~ 93 (192)
T 2va4_A 16 AERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILKG--SNTELTVRNIINSDGGPYVCRATNKAGEDEKQAFLQVF 93 (192)
T ss_dssp TTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEET--TTTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEeC--CeeEEEEecCChhcCcEEEEEEEccccccceEEEEEEE
Confidence 55788999999999887332 3334445555433 3357999999999999999999998774 333345555
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeC--CEecCC-----CCCeEEEEeCCEEEEEEcCCCCCCCEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRE--DFPITS-----SPDFQIHTFSTKSILIMRQVFMEDSGVF 204 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~--~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 204 (283)
.+|.+... ....+..|+.+.|.|.+.+.|.+.+.|+++ +..+.. ..++.+........|.|.++..+|.|.|
T Consensus 94 ~~p~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y 172 (192)
T 2va4_A 94 VQPHIIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRY 172 (192)
T ss_dssp EEEEEEEE-CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTCBCTTSCEEEEEETTEEEEEEESCCGGGCEEE
T ss_pred ccCccccc-CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccccccCCcEEEeeccCceEEEEecCCcccCEEE
Confidence 56665543 345677899999999999999999999998 555543 2456666666778899999999999999
Q ss_pred EEEEEeCCceeEEEEEEEE
Q psy14060 205 AVIAENRGGKAKCSANLVV 223 (283)
Q Consensus 205 ~C~a~n~~g~~~~~~~l~v 223 (283)
+|.|.|..|.....+.|.|
T Consensus 173 ~C~a~n~~g~~~~~~~l~V 191 (192)
T 2va4_A 173 DCEAASRIGGHQKSMYLDI 191 (192)
T ss_dssp EEEEECSSCEEEEEEEEEE
T ss_pred EEEEEecCCceEEEEEEEe
Confidence 9999999999888887776
No 88
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.87 E-value=6.6e-21 Score=145.36 Aligned_cols=156 Identities=19% Similarity=0.205 Sum_probs=119.1
Q ss_pred eeeecCcEEEEEEEccCc--cce-----EEeecCCCEEEEEcCC--EEEEEEccCCCCCCeEEEEEEEeccee--eeeec
Q psy14060 59 EIHTAKSQQVQKEKKGDK--EIV-----RKITATETTEMEHKGK--IQERVVDASELDDDGYYAITERKYYAL--SDLSE 127 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~--~i~-----~~~~~~~~~~~~~~~~--~~~L~i~~~~~~D~G~Y~C~a~n~~~~--~~~~~ 127 (283)
.+.+|+.+.|.|.+.|.| .+. ..+....+..+...+. ...|.|.+++.+|+|.|+|.+.|..+. .....
T Consensus 13 ~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 92 (182)
T 1rhf_A 13 TVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVEDGGETEISQPVW 92 (182)
T ss_dssp EEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESSCTTCEECCCEE
T ss_pred EEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEcCCCcEEEEEEE
Confidence 367788999999999877 332 2333333333332222 478999999999999999999988552 33445
Q ss_pred cCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCC-EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEE
Q psy14060 128 QKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAV 206 (283)
Q Consensus 128 ~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 206 (283)
+.+..+|.+...+....+..|+.+.|.|.+.+.|.| .+.|++++..+..... ....|.|.++ +|+|.|+|
T Consensus 93 l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~~~-------~~~~L~i~~~--~d~G~Y~C 163 (182)
T 1rhf_A 93 LTVEGVPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAP-------SPSVLNVTGV--TQSTMFSC 163 (182)
T ss_dssp EEEECSCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSCSEE-------SSEEEEECCC--SSCEEEEE
T ss_pred EEEecCCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCCCCC-------CceEEEEecc--ccCeEEEE
Confidence 666678888888888889999999999999999999 9999999998864321 4457899888 58999999
Q ss_pred EEEeCCceeEE-EEEEEE
Q psy14060 207 IAENRGGKAKC-SANLVV 223 (283)
Q Consensus 207 ~a~n~~g~~~~-~~~l~v 223 (283)
.|.|..|...+ .+.|.|
T Consensus 164 ~a~N~~g~~~s~~~~l~V 181 (182)
T 1rhf_A 164 EAHNLKGLASSRTATVHL 181 (182)
T ss_dssp EEEETTEEEECCCEEEEE
T ss_pred EEECCCCCcccceEEEEe
Confidence 99999998754 566654
No 89
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.87 E-value=4.9e-21 Score=146.78 Aligned_cols=161 Identities=18% Similarity=0.223 Sum_probs=120.7
Q ss_pred eeeecCcEEEEEEEccCccce-EEeec--------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee---eeee
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITA--------TETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL---SDLS 126 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~--------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~---~~~~ 126 (283)
.+.+|+.+.|.|.+.+.|... .|... ..++.... ...|.|.+++.+|+|.|+|.+.+..+. ....
T Consensus 13 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~ 89 (189)
T 2v5t_A 13 EFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA---NNNLQILNINKSDEGIYRCEGRVEARGEIDFRDI 89 (189)
T ss_dssp EEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECT---TSCEEETTCCGGGCEEEEEEEEETTTTEEEEEEE
T ss_pred EEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEec---CCCEEEeeCCHhHCcEEEEEEEEcCCCceEEEEE
Confidence 477888999999999887332 33222 22333322 235999999999999999999988642 1223
Q ss_pred ccCCCCCCeEEecCC--ceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEE
Q psy14060 127 EQKPAKPPVFTKKIQ--PCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVF 204 (283)
Q Consensus 127 ~~~~~~~p~~~~~~~--~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 204 (283)
.+.+..+|.+..... ...+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+. .....|.|.++..+|+|.|
T Consensus 90 ~l~v~~~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y 167 (189)
T 2v5t_A 90 IVIVNVPPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPY 167 (189)
T ss_dssp EEEEEEEEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCSSSEEEE--TTTTEEEECSCCGGGCEEE
T ss_pred EEEecCCCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCCCcEEEe--cCCCEEEEcCCChhhCeeE
Confidence 344444565554433 346778999999999999999999999999998876665443 3345799999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEE
Q psy14060 205 AVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 205 ~C~a~n~~g~~~~~~~l~v~ 224 (283)
+|.|.|..|.....+.|.|.
T Consensus 168 ~C~a~n~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 168 VCRATNKAGEDEKQAFLQVF 187 (189)
T ss_dssp EEEEEETTEEEEEEEEEEEE
T ss_pred EEEEEeCCCceeEEEEEEEE
Confidence 99999999998888888775
No 90
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.87 E-value=2.6e-21 Score=158.44 Aligned_cols=196 Identities=8% Similarity=0.015 Sum_probs=127.0
Q ss_pred eeecCcEEEEEEEccCccceEEeecCCC----EEEEEcC-CEEEEEEccCCCCCCeEEEEEEEeccee----eeeeccCC
Q psy14060 60 IHTAKSQQVQKEKKGDKEIVRKITATET----TEMEHKG-KIQERVVDASELDDDGYYAITERKYYAL----SDLSEQKP 130 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i~~~~~~~~~----~~~~~~~-~~~~L~i~~~~~~D~G~Y~C~a~n~~~~----~~~~~~~~ 130 (283)
+.+|+.++|.|.+.|. + .|...+.. ......+ ....|.|.+++.+|+|.|+|.+.|..+. .....+.+
T Consensus 12 v~~G~~v~L~C~~~~~--v-~W~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~~v~v 88 (289)
T 3mjg_X 12 LNVSSTFVLTCSGSAP--V-VWERMSQEPPQEMAKAQDGTFSSVLTLTNLTGLDTGEYFCTHNDSRGLETDERKRLYIFV 88 (289)
T ss_dssp CCTTCCEEEEEEESSC--C-EEEBTTBCCSEEEEECTTSCEEEEEEECSCCGGGCEEEEEECCC------CCCEEEEEEC
T ss_pred EeCCCcEEEEEeccce--E-EEECCCCCcccceeccCCCceeEEEEEccCChhhCEEEEEEEcccCCCCcCcEEeEEEEE
Confidence 6678899999999986 4 33332222 2221121 2478999999999999999999987753 11222333
Q ss_pred CCCCe-EEecCCc---eeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEE
Q psy14060 131 AKPPV-FTKKIQP---CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAV 206 (283)
Q Consensus 131 ~~~p~-~~~~~~~---~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 206 (283)
..+.. +...... ..+..|+.+.|.|.+. .|.+.+.|++++........+ ..... +. ...|+|.|+|
T Consensus 89 ~~p~~~~~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~w~~~~~~~~~~~~~----~~~~~-~~----~~~d~G~Y~C 158 (289)
T 3mjg_X 89 PDPTVGFLPNDAEELFIFLTEITEITIPCRVT-DPQLVVTLHEKKGDVALPVPY----DHQRG-FS----GIFEDRSYIC 158 (289)
T ss_dssp CCTTCCBCCCCHHHHEEEESSCCCEEECCCBS-CTTSCEEEEESSCCSCCCCCE----ETTTE-EE----ECCCSSEEEE
T ss_pred ECCCcCcccCCCCcceEEeecCCeEEEEeEcC-CCCceEEEEeCCCCCccceee----cCCcC-ee----eeccCcEEEE
Confidence 22221 1111111 5688999999999998 588889988865222111111 11111 11 2579999999
Q ss_pred EEEeCCceeEEE-EEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEE
Q psy14060 207 IAENRGGKAKCS-ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSL 276 (283)
Q Consensus 207 ~a~n~~g~~~~~-~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~ 276 (283)
.|.|..+..... ..+.+... .+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|+.
T Consensus 159 ~a~n~~~~~~s~~~~l~v~~~--------~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~ 221 (289)
T 3mjg_X 159 KTTIGDREVDSDAYYVYRLQV--------SSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTYPRKE 221 (289)
T ss_dssp EEEETTEEEECCCEEEEECCC--------CCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEECTTSS
T ss_pred EEEeCCceeeeeeEEEEecCC--------CCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEcCCcc
Confidence 999887665443 45555432 256666666667899999999999999999999999987764
No 91
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.87 E-value=1.7e-21 Score=149.75 Aligned_cols=162 Identities=18% Similarity=0.206 Sum_probs=125.3
Q ss_pred eeeecCcEEEEEEEccCccce-EEeec-------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee--eeeecc
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITA-------TETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL--SDLSEQ 128 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~-------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~--~~~~~~ 128 (283)
.+.+|+.+.|.|.+.|.|... .|... ..++.+...+ ..|.|.+++.+|+|.|+|.+.|..+. .....+
T Consensus 18 ~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~~--~~L~i~~~~~~d~G~Y~C~~~~~~~~~~~~~~~l 95 (192)
T 2iep_A 18 DALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIRENG--QLLTILSVEDSDDGIYCCTANNGVGGAVESCGAL 95 (192)
T ss_dssp EEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGGG--TEEEESSCCGGGCEEEEEEEECSSSCCEEEEEEE
T ss_pred eeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCCc--cEEEEcCCCcccCeEEEEEEEcCCCceeEeEEEE
Confidence 367788999999999877322 22221 3455544333 36999999999999999999988763 233345
Q ss_pred CCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEE
Q psy14060 129 KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 129 ~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 208 (283)
.+..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+... ..|.|.++..+|+|.|+|.+
T Consensus 96 ~v~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~---~~L~i~~~~~~d~G~Y~C~a 172 (192)
T 2iep_A 96 QVKMKPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALRENSRIAVLES---GSLRIHNVQKEDAGQYRCVA 172 (192)
T ss_dssp EEEEEEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCCSSEEECTT---SCEEESSCCGGGCEEEEEEE
T ss_pred EEEeCCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCCCcEEEecC---CcEEEecCChhhCEEEEEEE
Confidence 556678887777778899999999999999999999999999999887665544332 25999999999999999999
Q ss_pred EeCCceeEE-EEEEEEEe
Q psy14060 209 ENRGGKAKC-SANLVVEE 225 (283)
Q Consensus 209 ~n~~g~~~~-~~~l~v~~ 225 (283)
.|..|...+ .+.|.|..
T Consensus 173 ~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 173 KNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp EETTEEEECCCEEEEEEC
T ss_pred EcCCCcEEEEEEEEEEEe
Confidence 999998744 47777763
No 92
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.87 E-value=2.2e-20 Score=142.70 Aligned_cols=162 Identities=14% Similarity=0.127 Sum_probs=121.7
Q ss_pred eeeecCcEEEEEEEccCccc--e-EEeecCCCEEEE-EcCCEEEEEEccCCCCCCeEEEEEEEecceeeeeeccCCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDKEI--V-RKITATETTEME-HKGKIQERVVDASELDDDGYYAITERKYYALSDLSEQKPAKPP 134 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i--~-~~~~~~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~p 134 (283)
.+.+|+.+.|.|.+.|.+.. . .|...+...... .......|.|. +.+|+|.|+|.+.|... ....+.+..+|
T Consensus 9 ~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~~~~~~l~i~--~~~d~G~Y~C~~~n~~~--~~~~l~V~~~P 84 (184)
T 3b5h_A 9 VEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALPGQKTEFKVD--SDDQWGEYSCVFLPEPM--GTANIQLHGPP 84 (184)
T ss_dssp EEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCCCSEEEEEEC--GGGCCEEEEEEEESTTS--CEEEEEECCSC
T ss_pred EEecCCCEEEEEECCCCCCCceEEEEEeCCEEeecccccCCcEEEEEe--chhhCeEEEEEEECCcC--cEEEEEEecCC
Confidence 47889999999999987632 2 444332211110 11234566666 68999999999998433 23345556788
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeec-CCEEEEEe---CCE-ecCCC--CCeEEEEeCCEEEEEEcCCC-CCCCEEEEE
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDP-LPTIKWFR---EDF-PITSS--PDFQIHTFSTKSILIMRQVF-MEDSGVFAV 206 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p-~~~~~W~k---~~~-~~~~~--~~~~~~~~~~~~~l~i~~~~-~~d~G~Y~C 206 (283)
.+...+....+..|+.+.|.|.+.+.| .+.+.|++ ++. .+... .++.+...+....|.|.++. .+|.|.|+|
T Consensus 85 ~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C 164 (184)
T 3b5h_A 85 RVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSSQGRSELHIENLNMEADPGQYRC 164 (184)
T ss_dssp CCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCTTGGGTEEEEEETTEEEEEECSCCTTTSSEEEEE
T ss_pred ceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeecCCCCEEEEEecCCeeEEEEeeccccccCceEEE
Confidence 888777778899999999999999999 79999999 444 44332 56777777777899999999 899999999
Q ss_pred EEEeCCceeEEEEEEEEE
Q psy14060 207 IAENRGGKAKCSANLVVE 224 (283)
Q Consensus 207 ~a~n~~g~~~~~~~l~v~ 224 (283)
.|.|..|.....+.|.|.
T Consensus 165 ~a~N~~g~~~~~~~l~V~ 182 (184)
T 3b5h_A 165 NGTSSKGSDQAIITLRVR 182 (184)
T ss_dssp EEEETTEEEEEEEEEEEC
T ss_pred EEEeCCCcceEEEEEEEe
Confidence 999999998888888775
No 93
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.87 E-value=2e-20 Score=144.16 Aligned_cols=141 Identities=21% Similarity=0.351 Sum_probs=121.0
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++..+|+|.|+|.+.|
T Consensus 5 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n 84 (197)
T 3lcy_A 5 GEAPGIRKEMKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFGKELIQSRKYKMSSDGRTHTLTVMTEEQEDEGVYTCIATN 84 (197)
T ss_dssp CEEEEEEECCCCEEEETTSEEEEEEEEEEESCCEEEEEETTEEECCCSSEEEEESSSEEEEEEECCSGGGCEEEEEEEEC
T ss_pred CCCCcccccCCceEEeCCCcEEEEEEEecCCCCEEEEEECCEECCCCccEEEEeCCCEEEEEEecCCccCCEEEEEEEEC
Confidence 35788888888899999999999999999999999999999999887788888777788999999999999999999999
Q ss_pred CCceeEEEEEEEEEeccCCCCCCCCCCeEEec---CCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCCC
Q psy14060 211 RGGKAKCSANLVVEEKRQGGRGGVVPPSFLTT---ISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVKR 281 (283)
Q Consensus 211 ~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~---~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~~ 281 (283)
..+.......+.|.. +|.+... .....+..|+.+.|.|.+.+.|.|.+.|+++|..+....
T Consensus 85 ~~~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~~~~~ 148 (197)
T 3lcy_A 85 EVGEVETSSKLLLQA----------TPQFHPGYPLKEKYYGAVGSTLRLHVMYIGRPVPAMTWFHGQKLLQNSE 148 (197)
T ss_dssp SSCEEEEEEEEEEEE----------EEEECTTSCCCSEEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCS
T ss_pred CCCceeEEEEEEEEc----------CCCCCCCccCCcceeecCCCeEEEEEEEeeeeCCeeEEeECCEECCCCC
Confidence 999888888888875 3333321 234567899999999999999999999999999986543
No 94
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.87 E-value=3.1e-20 Score=145.29 Aligned_cols=145 Identities=23% Similarity=0.353 Sum_probs=121.9
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecC-CCCCeEEEEe-CCEEEEEEcCCCC-CCCEEEEEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPIT-SSPDFQIHTF-STKSILIMRQVFM-EDSGVFAVIA 208 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~-~~~~~~~~~~-~~~~~l~i~~~~~-~d~G~Y~C~a 208 (283)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+. ...++.+... +....|.|.++.. +|+|.|+|.+
T Consensus 5 ~pP~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~~ 84 (212)
T 2yd1_A 5 HPPEIIRKPQNQGVRVGGVASFYCAARGDPPPSIVWRKNGKKVSGTQSRYTVLEQPGGISILRIEPVRAGRDDAPYECVA 84 (212)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCTTSTTEEEEEETTTEEEEEESSCCTTTTCSEEEEEE
T ss_pred CCCEEEcCCCceEEecCCEEEEEEEEccCCCCeEEEEECCEECCCCcceeEEEEcCCCeEEEEEEecCCCCcCceEEEEE
Confidence 58889999999999999999999999999999999999999987 4456665543 4457899999999 9999999999
Q ss_pred EeCCce-eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecC
Q psy14060 209 ENRGGK-AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 209 ~n~~g~-~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~ 279 (283)
.|..|. ....+.|.|..... ....+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 85 ~n~~g~~~~~~~~l~V~~~~~---~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~~~~~ 153 (212)
T 2yd1_A 85 ENGVGDAVSADATLTIYEGDK---TPAGFPVITQGPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQTKVDM 153 (212)
T ss_dssp ECSSSCEEEEEEEEEEECTTC---SCTTCCEEEECCCCEEEETTCCEEECCEEECSSCCEEEEEETTEECCT
T ss_pred EeCCCCeEEeeEEEEEecccC---CCCCCCeeEeCCCceEeecCCeEEEEEEeccCCCCeEEEEECCeEccc
Confidence 999988 67778888875321 011237788777788899999999999999999999999999999875
No 95
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.87 E-value=1.7e-23 Score=181.52 Aligned_cols=249 Identities=11% Similarity=0.036 Sum_probs=150.3
Q ss_pred eEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeee-cCCeeeecCcEEEEEEEccC-cc-ce-EEeecCCCEE------E
Q psy14060 21 KSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGV-HGKEIHTAKSQQVQKEKKGD-KE-IV-RKITATETTE------M 90 (283)
Q Consensus 21 ~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~v~~g~~v~l~C~~~g~-~~-i~-~~~~~~~~~~------~ 90 (283)
+.|.|.|..+.......|.|..... ..|.+... ....+..|+.++|.|.+.|. |. +. .|...+.... .
T Consensus 93 Y~C~~~~~~~~~~~~~~l~V~~~~~--~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~~~ 170 (434)
T 1igy_B 93 YYCVREGEVPYWGQGTTVTVSSAKT--TPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAV 170 (434)
T ss_dssp ECCCCSSSSCCCCCCEECEECCSCC--BCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECCCE
T ss_pred EEEEEEccccccCCceEEEEccCCC--CCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecCce
Confidence 4566777554444555677764211 22333322 22235678899999999986 53 23 4443322100 0
Q ss_pred EEcC---CEEEEEEccCCCCCCeEEEEEEEecceee-eeeccCCC-------------CCCeEEecCCcee-ecCCCcEE
Q psy14060 91 EHKG---KIQERVVDASELDDDGYYAITERKYYALS-DLSEQKPA-------------KPPVFTKKIQPCR-AFEQDQAR 152 (283)
Q Consensus 91 ~~~~---~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~~~~-------------~~p~~~~~~~~~~-~~~g~~v~ 152 (283)
...+ ....|.|.++..+| |.|+|.+.|..+.. ....+.+. .+..+...+.... +..|+.+.
T Consensus 171 ~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~~~ 249 (434)
T 1igy_B 171 LQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVTPK 249 (434)
T ss_dssp ECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSCCE
T ss_pred ecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCCcE
Confidence 0011 13468999999999 99999999987742 12222111 1233333333222 78899999
Q ss_pred EEEEEeeec----CCEEEEEeCCEecCCCCCeEEE--Ee---CCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEE
Q psy14060 153 FEVEFDGDP----LPTIKWFREDFPITSSPDFQIH--TF---STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223 (283)
Q Consensus 153 l~C~~~g~p----~~~~~W~k~~~~~~~~~~~~~~--~~---~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 223 (283)
|.|.+.|.+ .+.+.|+|++..+......... .. ...+.|.|.++..+|.|.|+|.|.|..+.......+.+
T Consensus 250 L~C~~~g~~p~P~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~v~~ 329 (434)
T 1igy_B 250 VTCVVVDISKDDPEVQFSWFVDNVEVHTAQTQPREEQFNSTFRVVSALPIMHQDWLNGKEFKCRVNSAAFPAPIEKTISK 329 (434)
T ss_dssp EEEEECCCCSSCCCCCBCBBSSSCCBCCCSCCCCCCCCSSSCCCCCCEECCHHHHHHTCCCBCCBCCSSCSSCCCCCCCC
T ss_pred EEEEEeccccCCCCeEEEEEeCCcccCCcccCcceeCCCCcEEEEEEEEECHHHccCCCcEEEEEECCCCCCceeEEEec
Confidence 999999873 3589999999776432111000 00 11235889999999999999999998876433222221
Q ss_pred EeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC--eeEEeeCCEEec
Q psy14060 224 EEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL--DVYWLKVSSLSD 278 (283)
Q Consensus 224 ~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~--~v~W~~~g~~l~ 278 (283)
.. ....+|.+...+.......|+.+.|.|.+.|.+++ .|+|++||+.+.
T Consensus 330 ~~------~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 380 (434)
T 1igy_B 330 TK------GKPRAPQVYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQSDGQAPE 380 (434)
T ss_dssp CC------SCCBCCCCEEECCCSSSSSSSEEEEEEEEEEEBCSCEEEEEEETTSCCS
T ss_pred cC------CCCcCCEEEEECCCHHHhcCCcEEEEEEEEeeECCCeEEEEEECCEecC
Confidence 00 00135666554433334467789999999996443 899999999874
No 96
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.87 E-value=1.3e-21 Score=163.18 Aligned_cols=210 Identities=11% Similarity=0.048 Sum_probs=129.2
Q ss_pred CcEEEEEEEccC-c-cce-EEeecC------CCE--EEEEcCC---EEEEEEccCCCCCCeEEEEEEEecceeeee-ecc
Q psy14060 64 KSQQVQKEKKGD-K-EIV-RKITAT------ETT--EMEHKGK---IQERVVDASELDDDGYYAITERKYYALSDL-SEQ 128 (283)
Q Consensus 64 ~~v~l~C~~~g~-~-~i~-~~~~~~------~~~--~~~~~~~---~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~-~~~ 128 (283)
+.+.|.|.+.|. | .+. .|...+ ... .....+. ...|.|.++..+|+|.|+|.+.|..+.... ..+
T Consensus 25 ~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~ 104 (323)
T 2wqr_A 25 PTIQLLCLVSGYTPGTIQITWLEDGQVMDVDLSTASTTQEGELASTQSELTLSQKHWLSDRTYTCQVTYQGHTFEDSTKK 104 (323)
T ss_dssp SEEEEEEEEEEECCCCEEEEEEETTEECCGGGEEEEEEEETTEEEEEEEEEEEHHHHHTTCCEEEEEEETTEEEEEEECC
T ss_pred CcEEEEEEEeCeECCCeEEEEEECCEEcccceecCCcCccCCcEEEEEEEEEcHHHcCCCCcEEEEEEeCCCCcceeeec
Confidence 489999999985 3 232 333221 111 1111221 235788888888999999999998764321 111
Q ss_pred ---CCCCCC-eEEecCCceeecCCCcEEEEEEEeee-cCC---EEEEEeCC-EecCCCCCeEEEEeC----CEEEEEEcC
Q psy14060 129 ---KPAKPP-VFTKKIQPCRAFEQDQARFEVEFDGD-PLP---TIKWFRED-FPITSSPDFQIHTFS----TKSILIMRQ 195 (283)
Q Consensus 129 ---~~~~~p-~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~---~~~W~k~~-~~~~~~~~~~~~~~~----~~~~l~i~~ 195 (283)
....+| .+...+....+..|+.+.|.|.+.|. |.+ .+.|+|++ ..+............ ..+.|.|.+
T Consensus 105 ~~~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~~~~~~~~~~~g~~~~~~~L~I~~ 184 (323)
T 2wqr_A 105 CADSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNHSTRKEEKQRNGTLTVTSTLPVGT 184 (323)
T ss_dssp CCCSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCCCCCEEEECTTSCEEEEEEEECCH
T ss_pred CCCCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCcccccccCCCccCCCCCEEEEEEEEECH
Confidence 111233 33444555567889999999999886 456 89999975 333222111110101 134699999
Q ss_pred CCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCC-C-eeEEeeC
Q psy14060 196 VFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP-L-DVYWLKV 273 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~-~-~v~W~~~ 273 (283)
+..+|.|.|+|.+.|..+.......+.+.. ....+|.+...+.......|+.++|.|.+.|.++ + .|.|++|
T Consensus 185 ~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~------~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~ 258 (323)
T 2wqr_A 185 RDWIEGETYQCRVTHPHLPRALMRSTTKTS------GPRAAPEVYAFATPEWPGSRDKRTLACLIQNFMPEDISVQWLHN 258 (323)
T ss_dssp HHHHTTCCEEEEEECTTSSSCEEEEECCCC------SCCBCCEEEEEECCCCTTCTTEEEEEEEEEEEBSSCCEEEEEET
T ss_pred HHccCCCCEEEEEECCCCCCCeeeEEEccC------CCCCCCEEEEeCCChHHhcCCcEEEEEEeeeeeCCCcEEEEEEC
Confidence 999999999999999874433233322110 0013566554333222234999999999998543 3 7999999
Q ss_pred CEEecC
Q psy14060 274 SSLSDV 279 (283)
Q Consensus 274 g~~l~~ 279 (283)
|+.|..
T Consensus 259 g~~l~~ 264 (323)
T 2wqr_A 259 EVQLPD 264 (323)
T ss_dssp TEECCG
T ss_pred CEECCC
Confidence 998854
No 97
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.87 E-value=4.1e-20 Score=144.61 Aligned_cols=147 Identities=20% Similarity=0.241 Sum_probs=118.9
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEE-eCCEEEEEEcCC-CCCCCEEEEEEE
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT-FSTKSILIMRQV-FMEDSGVFAVIA 208 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~-~~~~~~l~i~~~-~~~d~G~Y~C~a 208 (283)
..+|.|...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.......+.. .+....|.|.++ ..+|+|.|+|.+
T Consensus 4 ~~~P~~~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~~d~G~Y~C~a 83 (212)
T 2yd6_A 4 ETPPRFTRTPVDQTGVSGGVASFICQATGDPRPKIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVA 83 (212)
T ss_dssp CEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCTTEEEEEEGGGTEEEEEECSCCTTTTCEEEEEEE
T ss_pred CCCCeEEeCcceeEEecCCeEEEEEEEeeCCCCEEEEEECCcCCCCCceeEEEEcCCCceEEEEeccCCCCCCeEEEEEE
Confidence 357888888888999999999999999999999999999999987643332222 234667999999 599999999999
Q ss_pred EeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 209 ENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 209 ~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
.|..|.....+.|.|...... +...|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|+.+...
T Consensus 84 ~n~~g~~~~~~~l~V~~~~~~---~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g~~l~~~ 152 (212)
T 2yd6_A 84 SNNVGEISVSTRLTVLREDQI---PRGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTS 152 (212)
T ss_dssp EETTEEEEEEEEEEEECGGGC---CTTCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEEC---
T ss_pred EcCCCcEEEEEEEEEeccCcc---CCCcceeecCCcceeEecCCCEEEEEEecCCCCCeEEEEECCccccCc
Confidence 999999888888888753110 112477777777788999999999999999999999999999988653
No 98
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.86 E-value=1.8e-20 Score=144.57 Aligned_cols=138 Identities=12% Similarity=0.156 Sum_probs=116.3
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEe-eecCCEEEEEeCCEecCCCC--CeEEEEeCC-------EEEEEEcCCCCCCCE
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFD-GDPLPTIKWFREDFPITSSP--DFQIHTFST-------KSILIMRQVFMEDSG 202 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~~~W~k~~~~~~~~~--~~~~~~~~~-------~~~l~i~~~~~~d~G 202 (283)
+|.|...+....+..|+.+.|.|.+. +.|.+.+.|++++..+.... ++.+..... ...|.|.++..+|+|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G 81 (195)
T 2c5d_C 2 ESPFVGNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRDGQILELADSTQTQVPLGEDEQDDWIVVSQLRITSLQLSDTG 81 (195)
T ss_dssp CCSEEECCCCEEECTTCCEEEEEEEEEESSCCCCEEEETTEECCSCEEEEEEEECSSSTTSEEEEEEEEEESSCCSTTCE
T ss_pred CCeeccChhheEEecCCcEEEecccccCCCCcEEEEEECCEEcccCCCCceEEEEccccccceeeccEEEEEeccccCCc
Confidence 67888889999999999999999999 88999999999999987652 233332222 468999999999999
Q ss_pred EEEEEEEeCCceeEEE-EEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC-eeEEeeCCEEecCC
Q psy14060 203 VFAVIAENRGGKAKCS-ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL-DVYWLKVSSLSDVK 280 (283)
Q Consensus 203 ~Y~C~a~n~~g~~~~~-~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~-~v~W~~~g~~l~~~ 280 (283)
.|+|.+.|..+..... +.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.| .+.|+++|..+...
T Consensus 82 ~Y~C~~~~~~~~~~~~~~~l~V~----------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~~ 151 (195)
T 2c5d_C 82 QYQCLVFLGHQTFVSQPGYVGLE----------GLPYFLEEPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAVPLATA 151 (195)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC----------CSCEEEECCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSCBSSSS
T ss_pred EEEEEEEeCCCceecccEEEEEe----------cCCeEEcCCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCEeccCC
Confidence 9999999988765444 677776 47888888888899999999999999999999 99999999988654
No 99
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.86 E-value=1.2e-20 Score=156.45 Aligned_cols=201 Identities=9% Similarity=0.035 Sum_probs=137.3
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCC-CCCCCCceeeecCCeeeecCcEEEEEEE------ccCccce-EEeecCCC----
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRK-VSVPEPSASGVHGKEIHTAKSQQVQKEK------KGDKEIV-RKITATET---- 87 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~-~~~~~p~~~~~~~~~v~~g~~v~l~C~~------~g~~~i~-~~~~~~~~---- 87 (283)
.+.|.|.|..|..+....+.+...+ .....+.. .....+..|+.+.|.|.+ .|.|... .|...+..
T Consensus 76 ~Y~C~a~n~~g~~~~~~~v~v~~~~p~~~~~~~~--~~~~~~~~g~~v~l~C~~~~~~~~~g~p~~~i~W~k~~~~l~~~ 153 (315)
T 1itb_B 76 HYYCVVRNSSYCLRIKISAKFVENEPNLCYNAQA--IFKQKLPVAGDGGLVCPYMEFFKNENNELPKLQWYKDCKPLLLD 153 (315)
T ss_dssp CCEECCCSSSCCCCEECCCEEECCCTTSSSCGGG--EEEEEEETTSCEEEECSSCTTTCTTTTCCCCCEEEETTEECCCC
T ss_pred EEEEEEeCCceEEEEEEEEEEeCCCCCccccccc--ccceEEecCCCeEEEEecccccccCCCCCCEEEEEECCEECCCc
Confidence 4678899999887776666655432 22212111 111237778899999998 7877322 23222111
Q ss_pred -EEEEEcCCEEEEEEccCCCCCCeEEEEEEE-ecceee----eeecc---C--CCCCCeEEecCCc-eeecCCCcEEEEE
Q psy14060 88 -TEMEHKGKIQERVVDASELDDDGYYAITER-KYYALS----DLSEQ---K--PAKPPVFTKKIQP-CRAFEQDQARFEV 155 (283)
Q Consensus 88 -~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~-n~~~~~----~~~~~---~--~~~~p~~~~~~~~-~~~~~g~~v~l~C 155 (283)
...... ...|.|.+++.+|+|.|+|.+. |..+.. ....+ . ...+|.+...+.. ..+..|+.+.|.|
T Consensus 154 ~~~~~~~--~~~L~i~~v~~~d~G~Y~C~a~~n~~g~~~~~~~~~~~~~~~~~~~~~P~~~~~~~~~~~~~~g~~v~l~C 231 (315)
T 1itb_B 154 NIHFSGV--KDRLIVMNVAEKHRGNYTCHASYTYLGKQYPITRVIEFITLEENKPTRPVIVSPANETMEVDLGSQIQLIC 231 (315)
T ss_dssp SSSEEEE--TTEEEESSCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCCCCCCCEECSCCSEEEECCSSSCEEEEE
T ss_pred cceEeec--CceEEEEeceehhCcEEEEEEEcCCCCcEEEEEEEEEEEEecCCCCCCCEEecCCCCcEEEeCCCcEEEEE
Confidence 111222 2379999999999999999999 666632 11111 1 1357777655543 4788999999999
Q ss_pred EEeeecCCEEEEEeCCEecCCCCCeEEE----Ee--------CCEEEEEEcCCCCCC-CEEEEEEEEeCCceeEEEEEEE
Q psy14060 156 EFDGDPLPTIKWFREDFPITSSPDFQIH----TF--------STKSILIMRQVFMED-SGVFAVIAENRGGKAKCSANLV 222 (283)
Q Consensus 156 ~~~g~p~~~~~W~k~~~~~~~~~~~~~~----~~--------~~~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~~~~~~l~ 222 (283)
.+.|.|.|.+.|++++..+......... .. .....|.|.++..+| +|.|+|.|.|..|.....+.|.
T Consensus 232 ~~~g~P~p~i~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~~l~ 311 (315)
T 1itb_B 232 NVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENPANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLI 311 (315)
T ss_dssp EEEECTTSEEEEEETTEECCTTCSSEEEEEEEECCSSCGGGEEEEEEEEESSCCGGGGTSCEEEEEECTTCCEEEEEEEE
T ss_pred EEecCCCCeeEEEECCEECCcccccccccceeeeccCCCceeEEEEEEEEeecCHHHcCCceEEEEecCCCceeEEEEEE
Confidence 9999999999999999998765432111 11 113479999999999 9999999999999998888877
Q ss_pred EE
Q psy14060 223 VE 224 (283)
Q Consensus 223 v~ 224 (283)
|.
T Consensus 312 v~ 313 (315)
T 1itb_B 312 YP 313 (315)
T ss_dssp CC
T ss_pred ec
Confidence 64
No 100
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.86 E-value=4.4e-21 Score=154.36 Aligned_cols=168 Identities=12% Similarity=0.031 Sum_probs=102.8
Q ss_pred CCCCCCeEEEEEEEecceeeeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeec-----CCEEEEEeCC--Eec--
Q psy14060 104 SELDDDGYYAITERKYYALSDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDP-----LPTIKWFRED--FPI-- 174 (283)
Q Consensus 104 ~~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p-----~~~~~W~k~~--~~~-- 174 (283)
++.+|+|.|+|.|.... .. ...+.+..++.+...+....+..|+++.|.|.+.+.| .+.+.|+|++ ..+
T Consensus 11 v~~~dsg~Y~C~a~g~~-~~-~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~ 88 (254)
T 2c1o_A 11 VRPGTSVKLSCKASGYS-FT-NYWMNWLRELVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKR 88 (254)
T ss_dssp -----------------------------CCCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEE
T ss_pred ecCCccEEEEEcCchhh-hh-hhhhheeeceeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceE
Confidence 67899999999998221 11 1122223366677778888999999999999999877 4889999843 211
Q ss_pred ----------CCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEE-EEEEEEEeccCCCCCCCCCCeEEecC
Q psy14060 175 ----------TSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC-SANLVVEEKRQGGRGGVVPPSFLTTI 243 (283)
Q Consensus 175 ----------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~-~~~l~v~~~~~~~~~~~~~p~~~~~~ 243 (283)
....++.+...+....|.|.++..+|+|.|+|.+.|..+.... ...+.|.... .+|.+...+
T Consensus 89 ~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~-------~~P~v~~~~ 161 (254)
T 2c1o_A 89 LIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRAD-------AAPTVSIFP 161 (254)
T ss_dssp EEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCC-------BCCEEEEEC
T ss_pred EEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCC-------CCCeeEeec
Confidence 1124666666667778999999999999999999987653222 2355554321 356666644
Q ss_pred CceEEcCCCeEEEEEEEEeeCCC--eeEEeeCCEEecCC
Q psy14060 244 SSAVINVGQLARFDAKISATKPL--DVYWLKVSSLSDVK 280 (283)
Q Consensus 244 ~~~~v~~g~~v~L~C~~~g~p~~--~v~W~~~g~~l~~~ 280 (283)
.......|+.+.|.|.+.|.+++ .+.|++||+.+...
T Consensus 162 ~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~ 200 (254)
T 2c1o_A 162 PSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNG 200 (254)
T ss_dssp CCHHHHHTTEEEEEEEEEEEBSSCCEEEEEESSSEECTT
T ss_pred CChhhccCCcEEEEEEEecccCCCcEEEEEECCCcccCc
Confidence 44434568899999999985443 59999999987653
No 101
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.85 E-value=7.8e-20 Score=141.10 Aligned_cols=144 Identities=24% Similarity=0.353 Sum_probs=116.1
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCC-CCeEEEE-eCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS-PDFQIHT-FSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~-~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
.+|.|...+....+..|+.+.|.|.+.+.|.+.+.|++++..+... .++.+.. .+....|.|.++..+|+|.|+|.+.
T Consensus 3 ~~P~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~ 82 (197)
T 2j8h_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (197)
T ss_dssp CCCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEECSCCGGGCSEEEEEEE
T ss_pred CCCEEEEcCCccEEcCCCEEEEEEEEeecCCCEEEEEECCEECccCCCcEEEEEcCCCEEEEEECcCCHHhCEEEEEEEE
Confidence 4788888888899999999999999999999999999999988753 3555543 3455689999999999999999999
Q ss_pred eCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 210 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
|..|.....+.|.|...... ..|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|+.+...
T Consensus 83 n~~g~~~~~~~l~V~~~p~~-----~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~ 148 (197)
T 2j8h_A 83 NQGGSVSGTASLEVEVPAKI-----HLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN 148 (197)
T ss_dssp ETTEEEEEEEEEEEEEEEEE-----CCSSCBTTBEEEEEETTCCCEEEEEEEEESCCEEEEEESSCEECSS
T ss_pred ECCCceeEEEEEEEcCCCcC-----CCCccccccCeEEEeCCCEEEEEEEEEecCCCcEEEEECCEEeecC
Confidence 99998888888888752110 1122222234567889999999999999999999999999988643
No 102
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.85 E-value=1.6e-21 Score=163.98 Aligned_cols=201 Identities=11% Similarity=0.029 Sum_probs=109.4
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEE-----ccCccce-EEe------ecCCC
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEK-----KGDKEIV-RKI------TATET 87 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~-----~g~~~i~-~~~------~~~~~ 87 (283)
.+.|.|.|..|..+....|.|...+......... .....+.+|+.+.|.|.+ .|.|... .|. ....+
T Consensus 93 ~Y~C~a~n~~~~~~~~~~l~V~~~~~~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~g~p~~~v~W~k~~~~l~~~~~ 171 (349)
T 4dep_C 93 NYTCMLRNTTYCSKVAFPLEVVQKDSCFNSPMKL-PVHKLYIEYGIQRITCPNVDGYFPSSVKPTITWYMGCYKIQNFNN 171 (349)
T ss_dssp EEEEEEECSSCEEEEEEEEEEECCCTTSCCSCCC-CEEEEETTCSEEEEECCSCTTSSCTTSCCEEEEEETTEECCSCSS
T ss_pred EEEEEEecCCceEEEEEEEEEecCCcccCccccc-CcceeeecCccEEEEcCCCcccccCCCCceEEEeeCCEECCCccc
Confidence 4689999999999999999998865422221110 011135667889999985 5666332 333 22222
Q ss_pred EEEEEcCCEEEEEEccCCCCCCeEEEEEEEecc-ee----eeeeccCCCC------CCeEEecCCce--eecCCCcEEEE
Q psy14060 88 TEMEHKGKIQERVVDASELDDDGYYAITERKYY-AL----SDLSEQKPAK------PPVFTKKIQPC--RAFEQDQARFE 154 (283)
Q Consensus 88 ~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~-~~----~~~~~~~~~~------~p~~~~~~~~~--~~~~g~~v~l~ 154 (283)
+. ..+ ..|.|.+++.+|+|.|+|.+.|.. +. .....+.+.. +|.+....... .+..|+.+.|.
T Consensus 172 ~~--~~~--~~L~i~~v~~~d~G~Y~C~a~n~~~g~~~~~~~~~~l~v~~~~~~~~~p~i~~~~~~~~~~v~~G~~v~l~ 247 (349)
T 4dep_C 172 VI--PEG--MNLSFLIALISNNGNYTCVVTYPENGRTFHLTRTLTVKVVGSPKNAVPPVIHSPNDHVVYEKEPGEELLIP 247 (349)
T ss_dssp EE--EET--TEEEEESCCGGGCEEEEEEEEEEETTEEEEEEEEEEEEEECCGGGCCSCEEC----------------CCC
T ss_pred ee--ecC--CEEEEeeeeecCCcEEEEEEEEeeCCEEEEEEEEEEEEEEccCCCCCCCeEecCCCceeEEEecCCcEEEE
Confidence 22 222 469999999999999999999976 32 2233333322 56665544332 67889999999
Q ss_pred EEEe----eecCCEEEEEeCCEecCC-CCCeEEEE-------e--CCEEEEEEcCCCCCCC-EEEEEEEEeCCceeEEEE
Q psy14060 155 VEFD----GDPLPTIKWFREDFPITS-SPDFQIHT-------F--STKSILIMRQVFMEDS-GVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 155 C~~~----g~p~~~~~W~k~~~~~~~-~~~~~~~~-------~--~~~~~l~i~~~~~~d~-G~Y~C~a~n~~g~~~~~~ 219 (283)
|.+. +.|.|.+.|++++..+.. ..++.+.. . .....|.|.++..+|. |.|+|.|.|..|.....+
T Consensus 248 C~~~~~~~g~p~p~v~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~ 327 (349)
T 4dep_C 248 CTVYFSFLMDSRNEVWWTIDGKKPDDITIDVTINESISHSRTEDETRTQILSIKKVTSEDLKRSYVCHARSAKGEVAKAA 327 (349)
T ss_dssp EEEEECCCTTCCCEEEEESSCC--------CCCCEEEECCTTCCEEEEECC-------------CEEEEECSSCEEEEEC
T ss_pred EEEEEccCCCCCCEEEEEECCEEccccCCccccccceeeecCCCcEEEEEEEEeeccHHHcCCcEEEEEEcCCCcEEEEE
Confidence 9998 468899999999988765 22221100 0 0133599999999999 999999999999999888
Q ss_pred EEEEEe
Q psy14060 220 NLVVEE 225 (283)
Q Consensus 220 ~l~v~~ 225 (283)
.|.|..
T Consensus 328 ~l~v~~ 333 (349)
T 4dep_C 328 KVKQKV 333 (349)
T ss_dssp C-----
T ss_pred EEeeec
Confidence 888764
No 103
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.85 E-value=7.2e-20 Score=152.91 Aligned_cols=195 Identities=11% Similarity=-0.053 Sum_probs=134.0
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCc-cce-EEeec-------CCCEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDK-EIV-RKITA-------TETTEM 90 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~-~i~-~~~~~-------~~~~~~ 90 (283)
.+.|.|.|..|.......+.+...+.. .+.......+.+|+.+.|.|.+.|.| ... .|... ..++..
T Consensus 104 ~Y~C~a~n~~g~~~~~~~~~v~~~~p~----~~~~~~~~~~~~G~~v~L~C~~~g~p~~~~i~W~k~~~~l~~~~~~~~~ 179 (329)
T 3oq3_B 104 RYLCTVTTKNGDCVQGIVRSHIRKPPS----CIPETYELGTHDKYGIDLYCGILYAKHYNNITWYKNNQELIIDGTKYSQ 179 (329)
T ss_dssp CEEEEEECTTSCEEEEEEEEEECCCCS----CEEEEEETTSSTTTCEEEECCCCSCCCCCEEEEEETTEECCCSSSSEEE
T ss_pred cEEEEEEeCCCceeeEEEEEEEcCCCc----EeccccceEEeCCCcEEEEeccCCCCCCceEEEEECCccCCCCCceEec
Confidence 588999999987665554444443211 11211112255688999999999988 443 33322 223332
Q ss_pred EEcCCEEEEEEccCCCCCCeEEEEEEEec--cee---e--eeeccCCCCCC----eEEecCCceeecCCCcEEEEEEEee
Q psy14060 91 EHKGKIQERVVDASELDDDGYYAITERKY--YAL---S--DLSEQKPAKPP----VFTKKIQPCRAFEQDQARFEVEFDG 159 (283)
Q Consensus 91 ~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~--~~~---~--~~~~~~~~~~p----~~~~~~~~~~~~~g~~v~l~C~~~g 159 (283)
. ...|.|.+++.+|+|.|+|.+.|. .+. . ....+.+..+| .+. .+....+..|+.+.|.|.+.+
T Consensus 180 ~----~~~L~I~~v~~~D~G~Y~C~a~n~~~~g~~~~~~s~~~~l~V~~~~~~~~~~~-~~~~~~v~~G~~~~l~C~~~g 254 (329)
T 3oq3_B 180 S----GQNLIIHNPELEDSGRYDCYVHYDDVRIKNDIVVSRCKILTVIPSQDHRFKLI-LDPKINVTIGEPANITCTAVS 254 (329)
T ss_dssp E----TTEEEECSCCGGGCEEEEEEEEECCTTSSSCEEEEEEEEEEEECCCCCCEEEE-CCSEEEECTTSCEEEEEEEEE
T ss_pred C----CCEEEEeecChhhCEEEEEEEEecccCCCceeEEEeeEEEEEECCCCCCCcee-cCCeeEEecCCCEEEEEEEEE
Confidence 2 257999999999999999999986 431 1 11334443343 233 566678999999999999999
Q ss_pred ec---CC-EEEEEeCCEecC-CCCCeEEE--EeC--CEEEEEEcCCCCCCCE-EEEEEEEeCCceeEEEEEEEE
Q psy14060 160 DP---LP-TIKWFREDFPIT-SSPDFQIH--TFS--TKSILIMRQVFMEDSG-VFAVIAENRGGKAKCSANLVV 223 (283)
Q Consensus 160 ~p---~~-~~~W~k~~~~~~-~~~~~~~~--~~~--~~~~l~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~v 223 (283)
.| .+ .+.|++++..+. ........ ... ....|.|.++..+|.| .|+|.|.|..|.....+.|.|
T Consensus 255 ~p~~~~~i~v~W~~~g~~i~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~~Y~C~a~N~~G~~~~~~~l~v 328 (329)
T 3oq3_B 255 TSLLVDDVLIDWENPSGWIIGLDFGVYSILTSSGGITEATLYFENVTEEYIGNTYTCRGHNYYFDKTLTTTVVL 328 (329)
T ss_dssp TTCCTTCCEEEEECTTSCBCCBCSSEEEEEEEETTEEEEEEEESSCCGGGTTCEEEEEEECSSCEEEEEEEEEE
T ss_pred CCCCCCCcEEEEEECCeeeeccCCceeeeecccCceeEeEEEEEeccHHHCCCcEEEEEEecCCceEEEEEEEe
Confidence 87 67 899999998753 33322211 122 3467999999999999 999999999999888887765
No 104
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.85 E-value=1.2e-20 Score=145.85 Aligned_cols=162 Identities=18% Similarity=0.233 Sum_probs=119.3
Q ss_pred eeeecCcEEEEEE-EccCcc-ce-EEeecCCCE------EEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeee----
Q psy14060 59 EIHTAKSQQVQKE-KKGDKE-IV-RKITATETT------EMEHKGKIQERVVDASELDDDGYYAITERKYYALSDL---- 125 (283)
Q Consensus 59 ~v~~g~~v~l~C~-~~g~~~-i~-~~~~~~~~~------~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~---- 125 (283)
.+.+|+.+.|.|. +.+.|. .. .|....... ..........|.|.+++.+|+|.|+|.+.|..+....
T Consensus 19 ~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~~ 98 (201)
T 3s97_C 19 RVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKF 98 (201)
T ss_dssp EEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEEEECCC
T ss_pred EEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcchhhcc
Confidence 4777889999999 777775 43 444332221 1112223456999999999999999999987642211
Q ss_pred ecc-------CCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCC
Q psy14060 126 SEQ-------KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFM 198 (283)
Q Consensus 126 ~~~-------~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 198 (283)
..+ ....+|.+........+..|+.+.|.|.+.+.|.+.+.|++++..+.... .+. .....|.|.++..
T Consensus 99 ~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~--~~~--~~~~~L~i~~v~~ 174 (201)
T 3s97_C 99 IPLIPIPERTTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPSTA--EIS--TSGAVLKIFNIQL 174 (201)
T ss_dssp EEEEEECCSSCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCTTC--EEE--TTTTEEEECSCCG
T ss_pred cceeeccccccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCCce--eec--CCCCEEEEccCCh
Confidence 111 11235666666667889999999999999999999999999999776432 222 2234799999999
Q ss_pred CCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 199 EDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
+|.|.|+|.+.|..|.....+.|.|.
T Consensus 175 ~d~G~Y~C~a~n~~g~~~~~~~l~V~ 200 (201)
T 3s97_C 175 EDEGIYECEAENIRGKDKHQARIYVQ 200 (201)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred hhCEEEEEEEEecCCceeeeEEEEEe
Confidence 99999999999999999888888875
No 105
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.85 E-value=2.1e-20 Score=144.52 Aligned_cols=164 Identities=13% Similarity=0.046 Sum_probs=114.2
Q ss_pred CCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEEEE-----EcCCEEEEEEccCCCCCCeEEEEEEEeccee
Q psy14060 48 PEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEME-----HKGKIQERVVDASELDDDGYYAITERKYYAL 122 (283)
Q Consensus 48 ~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~~-----~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~ 122 (283)
++|.+...+...+.+|+.++|.|.+.+.+....+...+...... .......|.|.+++.+|+|.|+|.+.|..+.
T Consensus 4 ~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (196)
T 3p2t_A 4 PKPTLWAEPGSVISWGNSVTIWCQGTLEAREYRLDKEESPAPWDRQNPLEPKNKARFSIPSMTEDYAGRYRCYYRSPVGW 83 (196)
T ss_dssp CCCEEEEESCSEEETTCCEEEEEECCTTCCEEEEEETTSCSCSEEECCCSSSSEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCCEEEccCCCcCCCCCcEEEEeeCCCCCCEEEEEECCCCCcccccccccCCceEEEEeccCCcccCceEEEEEeCCCcc
Confidence 46677666666688899999999999855322333333221111 1135788999999999999999999998772
Q ss_pred ---eeeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCe-EEEEeCCEEEEEEcC
Q psy14060 123 ---SDLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDF-QIHTFSTKSILIMRQ 195 (283)
Q Consensus 123 ---~~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~-~~~~~~~~~~l~i~~ 195 (283)
+....+.+ ..+|.+...+.. .+..|+.++|.|.+.+ +.+.+.|+|++..+...... ..........|.|.+
T Consensus 84 ~~~s~~~~l~V~~~~~~p~~~~~~~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~L~i~~ 161 (196)
T 3p2t_A 84 SQPSDPLELVMTGAYSKPTLSALPSP-LVTSGKSVTLLCQSRS-PMDTFLLCKERAAHPLLCLRSEHGAQQHQAEFPMSP 161 (196)
T ss_dssp BCCCCCEEEEEECSSCCCEEEEESCS-EECTTCCEEEEEEEEE-EEEEEEEEETTCCCGGGSEEEEEEEEEEEEEEEECS
T ss_pred cCCCccEEEEecCCCCCCEEEeCCcc-eecCCCeEEEEEecCC-CCCEEEEEeCCCcccceeecccccccCcceEEEeCC
Confidence 22222222 235665554443 6789999999999987 45689999999876433211 111223346799999
Q ss_pred CCCCCCEEEEEEEEeCCc
Q psy14060 196 VFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g 213 (283)
+..+|+|.|+|.|.|..+
T Consensus 162 v~~~d~G~Y~C~a~n~~~ 179 (196)
T 3p2t_A 162 VTSVHGGTYRCFSSHGFS 179 (196)
T ss_dssp CCGGGCEEEEEEEECGGG
T ss_pred CcccCCCeEEEEEEcCCC
Confidence 999999999999999876
No 106
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.85 E-value=6.7e-21 Score=147.37 Aligned_cols=165 Identities=9% Similarity=-0.054 Sum_probs=103.6
Q ss_pred CCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEEE-----EEcCCEEEEEEccCCCCCCeEEEEEEEeccee
Q psy14060 48 PEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEM-----EHKGKIQERVVDASELDDDGYYAITERKYYAL 122 (283)
Q Consensus 48 ~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~-----~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~ 122 (283)
++|.+...+...+.+|+.++|.|.+.+.+....|...+..... ........|.|.+++.+|+|.|+|.+.|..+.
T Consensus 4 ~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~ 83 (196)
T 2d3v_A 4 SKATLWAEPGSVISRGNSVTIRCQGTLEAQEYRLVKEGSPEPWDTQNPLEPKNKARFSIPSMTEHHAGRYRCYYYSPAGW 83 (196)
T ss_dssp CBCEEEEESCSEEETTCCEEEEEECCTTCCEEEEEETTCSSCSEEECCCSSTTEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCCEEEeCCCCcccCCCeEEEEEeCCCCCcEEEEEECCCCCCcccccccCCccccEEEeccCChhHCeEEEEEEeCCCCc
Confidence 3566665555568889999999999988752244433322211 01345788999999999999999999988653
Q ss_pred e---eeeccCCC---CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCe-EEEE-eCCEEEEEEc
Q psy14060 123 S---DLSEQKPA---KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDF-QIHT-FSTKSILIMR 194 (283)
Q Consensus 123 ~---~~~~~~~~---~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~-~~~~-~~~~~~l~i~ 194 (283)
. ....+.+. .+|.+...+ ...+..|+.++|.|.+.+.| +.+.|+|++..+...... .... ......|.|.
T Consensus 84 ~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~~~~~~~~~~~~~~~~~~L~I~ 161 (196)
T 2d3v_A 84 SEPSDPLELVVTGFYNKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKLSWTLDSQLTPSGQFQALFPVG 161 (196)
T ss_dssp CBCCCCEEEEEECSSCCCEEEC------------CEEEEEESSCC-SEEEEEEC---CCEEEEECEECTTSCEEEEEECC
T ss_pred CCcCccEEEEecCCCCCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCcccccccccccccCCCceeEEEee
Confidence 2 22223222 255554433 35788999999999999988 999999999876421110 0100 1123679999
Q ss_pred CCCCCCCEEEEEEEEeCCce
Q psy14060 195 QVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 195 ~~~~~d~G~Y~C~a~n~~g~ 214 (283)
++..+|+|.|+|.|.|..+.
T Consensus 162 ~v~~~D~G~Y~C~a~n~~~~ 181 (196)
T 2d3v_A 162 PVTPSHRWMLRCYGSRRHIL 181 (196)
T ss_dssp CCBTTBCEEEEEEEEETTEE
T ss_pred ecCcccCeeEEEEEEccCCC
Confidence 99999999999999997653
No 107
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=1.6e-21 Score=163.05 Aligned_cols=206 Identities=15% Similarity=0.141 Sum_probs=119.6
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCC----------------CCCceeee-----cCCeeeecCcEEEEEEEccCccc
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSV----------------PEPSASGV-----HGKEIHTAKSQQVQKEKKGDKEI 78 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~----------------~~p~~~~~-----~~~~v~~g~~v~l~C~~~g~~~i 78 (283)
.+.|.|.|. |..+..+.|.|...+... ..|.+... ....+.+|+.+.|.|.+.|.|..
T Consensus 75 ~Y~C~a~n~-~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~p~~ 153 (334)
T 1ry7_B 75 AYSCRQRLT-QRVLCHFSVRVTDAPSSGDDEDGEDEAEDTGVDTGAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTP 153 (334)
T ss_dssp ---------------------------------------------CCCCSCCTTCCCCEEEEETTCCEEEECCCCCSSCC
T ss_pred EEEEEEEeC-CeEEEEEEEEEeccCccccccccccccccccccCCCCEEeccccccceeEEecCCCcEEEEEEccCCCCC
Confidence 467889998 888888888887653211 12222210 01236678899999999998843
Q ss_pred e-EEeecCCCE-------EEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee-eeeccCCC----CCCeEEe-cCCcee
Q psy14060 79 V-RKITATETT-------EMEHKGKIQERVVDASELDDDGYYAITERKYYALS-DLSEQKPA----KPPVFTK-KIQPCR 144 (283)
Q Consensus 79 ~-~~~~~~~~~-------~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~~~~----~~p~~~~-~~~~~~ 144 (283)
. .|...+... ..........|.|.+++.+|+|.|+|.+.|..+.. ....+.+. .+|.+.. .+....
T Consensus 154 ~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~~~~~p~~~~~~~~~~~ 233 (334)
T 1ry7_B 154 SISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLDVLERSPHRPILQAGLPANQT 233 (334)
T ss_dssp EEECCBTTBCCCTTSSTTCCCCCTTTTEEEECSCCGGGCCCEEEEEEETTEEEEEEEEEEEECCCCSSCBCCTTCSCCEE
T ss_pred eEEEEECCEECcccccccceecccceEEEEECCCCcccCEEEEEEEEeCCCCEEEEEEEEEecCCCCCCceEecCCCceE
Confidence 3 333222111 11112234579999999999999999999998732 22222221 2343332 245677
Q ss_pred ecCCCcEEEEEEEeeecCCEEEEEe----CCEecCCCCC--eEEEEe-------CCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 145 AFEQDQARFEVEFDGDPLPTIKWFR----EDFPITSSPD--FQIHTF-------STKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 145 ~~~g~~v~l~C~~~g~p~~~~~W~k----~~~~~~~~~~--~~~~~~-------~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
+..|+.+.|.|.+.|.|.+.+.|++ ++..+..... +.+... .....|.|.++..+|+|.|+|.|.|.
T Consensus 234 ~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~ 313 (334)
T 1ry7_B 234 AVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKTAGANTTDKELEVLSLHNVTFEDAGEYTCLAGNS 313 (334)
T ss_dssp EESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTTSSBCCCCCCCSSCSCSCTTCCCEEECSCCTTSCSEEEEEEEES
T ss_pred EeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCCCCeeEEEeecCccccccccccEEEEccCCHHHCEEEEEEEeCC
Confidence 8999999999999999999999999 6665543221 111111 11236999999999999999999999
Q ss_pred CceeEEEEEEEEEec
Q psy14060 212 GGKAKCSANLVVEEK 226 (283)
Q Consensus 212 ~g~~~~~~~l~v~~~ 226 (283)
.|.....+.|.|...
T Consensus 314 ~G~~~~~~~l~V~~~ 328 (334)
T 1ry7_B 314 IGFSHHSAWLVVLPA 328 (334)
T ss_dssp SCCEEEEEEEEEECS
T ss_pred CCeEEEEEEEEEEEC
Confidence 999999999999863
No 108
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.84 E-value=3.5e-20 Score=142.40 Aligned_cols=159 Identities=9% Similarity=0.015 Sum_probs=110.4
Q ss_pred CCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEEEE-----EcCCEEEEEEccCCCCCCeEEEEEEEeccee
Q psy14060 48 PEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEME-----HKGKIQERVVDASELDDDGYYAITERKYYAL 122 (283)
Q Consensus 48 ~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~~-----~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~ 122 (283)
++|.+...+...+.+|+.|+|.|.+.+.+....+...+...... .......|.|.+++.+|+|.|+|.+.|..+.
T Consensus 3 ~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 82 (188)
T 1oll_A 3 PKPFIWAEPHFMVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGELW 82 (188)
T ss_dssp CCCEEEEESCSEEETTCCEEEEEECCTTCCEEEEEETTEEEEEECCSSCTTCCEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred CCCEEEeecCCcCCCCCCEEEEEecCCCCCEEEEEECCCcccccccccCCCcceeEEEeCcCCcccCeEEEEEecCCCCC
Confidence 35666655555688899999999998765322333332221111 1235678999999999999999999886542
Q ss_pred ---eeeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCC
Q psy14060 123 ---SDLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQV 196 (283)
Q Consensus 123 ---~~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~ 196 (283)
+....+.+ ..+|.+...+ ...+.+|+.++|.|.+.+ +.+.+.|+|++..+.. ..........|.|.++
T Consensus 83 ~~~s~~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~L~I~~v 156 (188)
T 1oll_A 83 SEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGPV 156 (188)
T ss_dssp CCCCCCEEEEEESCSCCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCEE----EEEECSSEEEEEEEEC
T ss_pred CCCCCceEEEecccCCCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCccccc----cccCCCceeEEEECCC
Confidence 12222222 2356665544 456889999999999876 5679999999876542 1223345678999999
Q ss_pred CCCCCEEEEEEEEeCC
Q psy14060 197 FMEDSGVFAVIAENRG 212 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~ 212 (283)
..+|+|.|+|.|.|..
T Consensus 157 ~~~d~G~Y~C~a~n~~ 172 (188)
T 1oll_A 157 TTAHRGTYRCFGSYNN 172 (188)
T ss_dssp CGGGCEEEEEECEEET
T ss_pred CcCCCcEEEEEEEcCC
Confidence 9999999999998864
No 109
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.84 E-value=1.7e-19 Score=138.34 Aligned_cols=133 Identities=18% Similarity=0.292 Sum_probs=113.0
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEe-CCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCc
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFR-EDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k-~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 213 (283)
.+...+....+..|+.+.|.|.+.+.|. .+.|++ ++..+....++.+...+....|.|.++..+|+|.|+|.+.|..|
T Consensus 4 ~~~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~~~g 82 (189)
T 2v44_A 4 QVTISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKIISTQRVVVQKEGVRSRLTIYNANIEDAGIYRCQATDAKG 82 (189)
T ss_dssp EEEESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBCCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECTTS
T ss_pred EEEecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCccCCCceEEEECCCCeEEEEEccCCcccCeEEEEEEEeCCC
Confidence 3456677788999999999999998777 999999 77777777788888777788999999999999999999999987
Q ss_pred ee-EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 214 KA-KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 214 ~~-~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
.. .....|.|.. +|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|..+.
T Consensus 83 ~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~ 138 (189)
T 2v44_A 83 QTQEATVVLEIYQ----------KLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVT 138 (189)
T ss_dssp CEEEEEEEEEEEC----------CCEEESCCCSEEEETTSCEEECCEEECSSCCEEEEEEEC--CE
T ss_pred CcEEEEEEEEEec----------CCceeecCCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcEEe
Confidence 65 5567777764 6777777777889999999999999999999999999998875
No 110
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.84 E-value=2.3e-19 Score=137.79 Aligned_cols=137 Identities=12% Similarity=0.169 Sum_probs=114.3
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeec-CCEEEEEe-CCEecCC-CCCeEEEE-eCCEEEEEEcCCCCCCCEEEEEEE
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDP-LPTIKWFR-EDFPITS-SPDFQIHT-FSTKSILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p-~~~~~W~k-~~~~~~~-~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a 208 (283)
++.+...+....+..|+.+.|.|.+.+.+ .+.+.|++ ++..+.. ..++.+.. ......|.|.++..+|+|.|+|.+
T Consensus 2 p~~v~~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~ 81 (191)
T 1epf_A 2 VLQVDIVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLSPNQQRISVVWNDDDSSTLTIYNANIDDAGIYKCVV 81 (191)
T ss_dssp -CCEEEESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEECCBSSSEEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEEecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCccccCCCCeEEEEECCCCceEEEEccCCcccCEEEEEEE
Confidence 45677778888999999999999999876 78999999 8877763 34555433 356778999999999999999999
Q ss_pred EeCC-ceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecC
Q psy14060 209 ENRG-GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 209 ~n~~-g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~ 279 (283)
.|.. +.....+.|.|. .+|.+...+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 82 ~~~~~~~~~~~~~l~v~----------~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~ 143 (191)
T 1epf_A 82 TAEDGTQSEATVNVKIF----------QKLMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVIL 143 (191)
T ss_dssp EETTTEEEEEEEEEEEE----------CCSEEEECCSSEECCTTSCEEECCEEECSSCCEEEEEETTEEGGG
T ss_pred EcCCCcceEEEEEEEee----------cCceEecCCCcEeecCCCeEEEEEEECCCCCCEEEEEECCEEeec
Confidence 9998 455566777776 378888888888999999999999999999999999999998864
No 111
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.84 E-value=6.8e-20 Score=139.70 Aligned_cols=137 Identities=12% Similarity=0.174 Sum_probs=112.1
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCC--EEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST--KSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~--~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
+|.|...+....+..|+.+.|.|.+.+.|.+.+.|++++..+....+..+..... ...|.|.++..+|+|.|+|.+.|
T Consensus 2 ~~~~~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~~ 81 (182)
T 1rhf_A 2 GLKLMGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRYWCQVED 81 (182)
T ss_dssp -----CCCEEEEEETTCCEEEEEEEESCSSCCEEEEETTEECCSSEEEEEEEETTEEEEEEEESSCCGGGCEEEEEEESS
T ss_pred CCEEEeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEECCeecCCCCceEEEecCCCceEEEEEeecCcccCeEEEEEEEc
Confidence 3556667777889999999999999998999999999999987665544444333 46799999999999999999999
Q ss_pred CCce-eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC-eeEEeeCCEEecC
Q psy14060 211 RGGK-AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL-DVYWLKVSSLSDV 279 (283)
Q Consensus 211 ~~g~-~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~-~v~W~~~g~~l~~ 279 (283)
..+. ....+.|.|.. +|.+...+....+.+|+.+.|.|.+.|.|.| .+.|+++|..+..
T Consensus 82 ~~~~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~~~~~ 142 (182)
T 1rhf_A 82 GGETEISQPVWLTVEG----------VPFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGG 142 (182)
T ss_dssp CTTCEECCCEEEEEEC----------SCEEEECCCCEEECTTCCEEEEEEEECSSSCCEEEEEETTEECSC
T ss_pred CCCcEEEEEEEEEEec----------CCeEEecCcceEecCCCEEEEEeEecCCCCCCEEEEEcCCeECCC
Confidence 8765 34567788874 7888888888899999999999999999999 9999999998854
No 112
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.84 E-value=1.3e-20 Score=145.89 Aligned_cols=164 Identities=12% Similarity=0.053 Sum_probs=108.6
Q ss_pred CCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEEE-----EEcCCEEEEEEccCCCCCCeEEEEEEEecc-e
Q psy14060 48 PEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEM-----EHKGKIQERVVDASELDDDGYYAITERKYY-A 121 (283)
Q Consensus 48 ~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~-----~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~-~ 121 (283)
++|.+...+...+.+|+.++|.|.+.+.+....|...+..... ........|.|.+++.+|+|.|+|.+.|.. +
T Consensus 4 ~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~~g 83 (198)
T 1ugn_A 4 PKPTLWAEPGSVITQGSPVTLRCQGGQETQEYRLYREKKTAPWITRIPQELVKKGQFPIPSITWEHTGRYRCYYGSDTAG 83 (198)
T ss_dssp CCCEEEEESCSEEETTCCEEEEEECCTTCCCEEEEESSSCCHHHHTSCHHHHTTTEEEESSCCGGGCEEEEEEEEETTTE
T ss_pred CCCeEeccCCCcccCCCcEEEEEEecCCCcEEEEEECCccccccccccccCCcccEEEECCCCHHHCeEEEEEEECCCCC
Confidence 4566666555568889999999999988843344433322210 001134579999999999999999999976 4
Q ss_pred e---eeeeccCCC---CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC-CeEEE-EeCCEEEEEE
Q psy14060 122 L---SDLSEQKPA---KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP-DFQIH-TFSTKSILIM 193 (283)
Q Consensus 122 ~---~~~~~~~~~---~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~-~~~~~-~~~~~~~l~i 193 (283)
. +....+.+. .+|.+...+ ...+..|+.+.|.|.+.+. .+.+.|+|++..+.... .+... .......|.|
T Consensus 84 ~~~~s~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i 161 (198)
T 1ugn_A 84 RSESSDPLELVVTGAYIKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEHPQCLNSQPHARGSSRAIFSV 161 (198)
T ss_dssp ECCCCCCEEEEEECSSCCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC------CEEEC------CCEEEEEE
T ss_pred cccCCccEEEEEcccccCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccCCccccccccCCCcceeEEEe
Confidence 1 222223332 245554443 3678899999999999987 78999999998764321 11111 1223568999
Q ss_pred cCCCCCCCEEEEEEEEeCCc
Q psy14060 194 RQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 194 ~~~~~~d~G~Y~C~a~n~~g 213 (283)
.++..+|+|.|+|.|.|..+
T Consensus 162 ~~v~~~D~G~Y~C~a~n~~~ 181 (198)
T 1ugn_A 162 GPVSPSRRWWYRCYAYDSNS 181 (198)
T ss_dssp CCCCTTSCEEEEEEEECTTS
T ss_pred cccCcccCeEEEEEEEeCCC
Confidence 99999999999999999865
No 113
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.84 E-value=4.7e-20 Score=150.97 Aligned_cols=200 Identities=8% Similarity=-0.040 Sum_probs=124.3
Q ss_pred ceEEEEEcCCee---eeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCc-cceEEeecC--CCEEEEEc
Q psy14060 20 LKSRTASSDRSG---VSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDK-EIVRKITAT--ETTEMEHK 93 (283)
Q Consensus 20 ~~~~~a~n~~g~---~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~-~i~~~~~~~--~~~~~~~~ 93 (283)
.+.|.|.|..|. .+....+.|..+...... .........+.+|+.+.|.|.+.+.. .+. +.... ........
T Consensus 65 ~Y~C~a~n~~g~~~~~~~~~~v~v~~p~~~~~~-~~~~~~~~~v~~G~~v~l~C~~~~p~~~v~-w~~~~~~~~~~~~~~ 142 (289)
T 3mjg_X 65 EYFCTHNDSRGLETDERKRLYIFVPDPTVGFLP-NDAEELFIFLTEITEITIPCRVTDPQLVVT-LHEKKGDVALPVPYD 142 (289)
T ss_dssp EEEEECCC------CCCEEEEEECCCTTCCBCC-CCHHHHEEEESSCCCEEECCCBSCTTSCEE-EEESSCCSCCCCCEE
T ss_pred EEEEEEcccCCCCcCcEEeEEEEEECCCcCccc-CCCCcceEEeecCCeEEEEeEcCCCCceEE-EEeCCCCCccceeec
Confidence 478999999887 345555555543221111 11100002366788999999998422 443 22221 11111111
Q ss_pred CCEEEEEEccCCCCCCeEEEEEEEecceeee--e--eccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEe
Q psy14060 94 GKIQERVVDASELDDDGYYAITERKYYALSD--L--SEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFR 169 (283)
Q Consensus 94 ~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~--~--~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k 169 (283)
..... . ...|+|.|+|.+.|..+... . ..+....+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++
T Consensus 143 ~~~~~-~----~~~d~G~Y~C~a~n~~~~~~s~~~~l~v~~~~~p~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~v~W~~ 217 (289)
T 3mjg_X 143 HQRGF-S----GIFEDRSYICKTTIGDREVDSDAYYVYRLQVSSINVSVNAVQTVVRQGENITLMCIVIGNEVVNFEWTY 217 (289)
T ss_dssp TTTEE-E----ECCCSSEEEEEEEETTEEEECCCEEEEECCCCCCCCEEEESCSEEETTSCEEEEEEEESCSSBEEEEEC
T ss_pred CCcCe-e----eeccCcEEEEEEEeCCceeeeeeEEEEecCCCCCCcEEeCCcceeEcCCCEEEEEEECCCCCcceEEEc
Confidence 11111 1 36799999999998766322 1 12222246666666666789999999999999999999999998
Q ss_pred CCEecCCCCCeEEEE-----eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEec
Q psy14060 170 EDFPITSSPDFQIHT-----FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 226 (283)
Q Consensus 170 ~~~~~~~~~~~~~~~-----~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 226 (283)
++............. ......|.|.++..+|+|.|+|.|.|..|....++.|.|...
T Consensus 218 ~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~~~~~~~l~v~~~ 279 (289)
T 3mjg_X 218 PRKESGRLVEPVTDFLLDMPYHIRSILHIPSAELEDSGTYTCNVTESVNDHQDEKAINITVV 279 (289)
T ss_dssp TTSSSSCCCCCEEEESCTTTTEEEEEEEESSCCSSCCEEEEEEEEETTTTEEEEEEEEEEEE
T ss_pred CCccCCCcccccccccCCcceEEEEEEEEcccChhhCcEEEEEeecCCCCceeEEEEEEEEE
Confidence 776543322211111 113467999999999999999999999999999999998863
No 114
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.84 E-value=9.4e-21 Score=155.25 Aligned_cols=199 Identities=11% Similarity=0.017 Sum_probs=135.5
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCcc-ce-EEeec-------CCCEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKE-IV-RKITA-------TETTEM 90 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~-i~-~~~~~-------~~~~~~ 90 (283)
.+.|.|.|..|..+....|.|..++... ........+.+|+.+.|.|.+.+... .. .|... ..++..
T Consensus 65 ~Y~C~~~n~~~~~~~~~~l~V~~~~~~~----~~~~~~~~v~~g~~v~l~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~ 140 (292)
T 4dkd_C 65 TYRCTEPGDPLGGSAAIHLYVKDPARPW----NVLAQEVVVFEDQDALLPCLLTDPVLEAGVSLVRVRGRPLMRHTNYSF 140 (292)
T ss_dssp CEEECCCC----CCEEECCEECCSSCCE----EESCSEEEEETTSCEECCEEESSGGGGSSEEEEEGGGCCCCSSCCEEC
T ss_pred EEEEEEccCCCCcceEEEEEEcCccccc----cccCCeEEEcCCCcEEEeeeCCCCCcceeEEEEecCCCccccCCcccc
Confidence 3789999999988888889988765321 11111123667889999999998431 11 33222 223333
Q ss_pred EEcCCEEEEEEccCCCCCCeEEEEEEEecceee--eeeccCCC----CCCeEEecCCceeecCCCcEEEEEEEeeecC-C
Q psy14060 91 EHKGKIQERVVDASELDDDGYYAITERKYYALS--DLSEQKPA----KPPVFTKKIQPCRAFEQDQARFEVEFDGDPL-P 163 (283)
Q Consensus 91 ~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~--~~~~~~~~----~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~-~ 163 (283)
... ..|.|.+++.+|+|.|+|.+.|..+.. ....+.+. .+|.+...+....+..|+.+.|.|.+.+.|. +
T Consensus 141 ~~~---~~L~i~~~~~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~~~~~~p~i~~~~~~~~~~~g~~v~l~C~~~~~~~~~ 217 (292)
T 4dkd_C 141 SPW---HGFTIHRAKFIQSQDYQCSALMGGRKVMSISIRLKVQKVIPGPPALTLVPAELVRIRGEAAQIVCSASSVDVNF 217 (292)
T ss_dssp CSS---SCCEETTCCGGGCSEEEEEECSTTSCEECCCEEEEEECCCCSSCEEEEESSCBCCCSSSCEEEEEEEEESSSCC
T ss_pred cCC---ceEEECCCCHHHCeEEEEEEEeCCCceeEEEEEEEEeCCCCCCCeEEccCCceeEecCCCEEEEEEecCCCCce
Confidence 322 239999999999999999999876632 22333333 3888888877777789999999999998664 5
Q ss_pred EEEEEeCCEecCCCCCeEEEE--eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 164 TIKWFREDFPITSSPDFQIHT--FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 164 ~~~W~k~~~~~~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
.+.|++++..+.......... ......|.|.++..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 218 ~~~w~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 281 (292)
T 4dkd_C 218 DVFLQHNNTKLAIPQQSDFHNNRYQKVLTLNLDQVDFQHAGNYSCVASNVQGKHSTSMFFRVVE 281 (292)
T ss_dssp EEECCBSSCCCCCCBEEEEETTEEEEEEEEEESSCCTTSCEEEEEEEECSSCEEEEEEEECC--
T ss_pred EEEEeCCCcccccCccceeccceeeeEEEEEECccChhcCeEEEEEEecCCCCceeEEEEEEee
Confidence 788999987665432211110 11234799999999999999999999999999888888875
No 115
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.84 E-value=1.1e-21 Score=170.15 Aligned_cols=218 Identities=10% Similarity=0.077 Sum_probs=134.9
Q ss_pred eeeecCcEEEEEEEccCc----cceEEeec-------------------------CCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKITA-------------------------TETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~~-------------------------~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|+.++|.|.+.+.+ .+ .|... ..|+.+..+ ++...|.|.+++.+
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 88 (434)
T 1igy_B 10 LARPGASVKMSCKASGYTFTTYTI-HWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSLTSD 88 (434)
T ss_dssp EECTBCCEEECCEECSSCGGGCCC-EEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSBCGG
T ss_pred EecCCCCEEEEEEccCCcccCceE-EEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCCChH
Confidence 467788999999998863 23 33221 124443321 23568999999999
Q ss_pred CCeEEEEEEEeccee-eeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCCCe
Q psy14060 108 DDGYYAITERKYYAL-SDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSPDF 180 (283)
Q Consensus 108 D~G~Y~C~a~n~~~~-~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~~~ 180 (283)
|+|.|+|.+.|..+. .....+.+ ..+|.+........+..|+.+.|.|.+.|. |.+ .+.|++++..+......
T Consensus 89 D~G~Y~C~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~G~~v~L~C~~~g~~P~p~~v~W~k~~~~~~~~~~~ 168 (434)
T 1igy_B 89 DSAVYYCVREGEVPYWGQGTTVTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFP 168 (434)
T ss_dssp GCSEECCCCSSSSCCCCCCEECEECCSCCBCCCEEEECCCCCCCCTTEEEEEEEEEEEBSSCCEEEETTTTBCSSEEECC
T ss_pred HCEEEEEEEEccccccCCceEEEEccCCCCCCeEEEcCCccccCCCCcEEEEEEEeeecCCCeEEEEeeCCcCCCeEecC
Confidence 999999999885321 11112222 234544433333445789999999999986 766 99999998753210000
Q ss_pred EEEEeC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccC-CC--CCCCCCCeEEecCCceE-EcCCCe
Q psy14060 181 QIHTFS---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQ-GG--RGGVVPPSFLTTISSAV-INVGQL 253 (283)
Q Consensus 181 ~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~-~~--~~~~~~p~~~~~~~~~~-v~~g~~ 253 (283)
.....+ ..+.|.|..+..+| |.|+|.|.|..+.......+.+....- .. .....|..+...+.... +.+|+.
T Consensus 169 ~~~~~~~~~~~s~L~i~~~~~~d-g~Y~C~a~n~~~~~~~~~~~~~~~~~~~v~~~~~~~~p~v~~~~p~~~~~v~~G~~ 247 (434)
T 1igy_B 169 AVLQSDLYTLSSSVTVPSSPRPS-ETVTCNVAHPASSTKVDKKIVPRDCGCKPCICTVPEVSSVFIFPPKPKDTLLITVT 247 (434)
T ss_dssp CEECSSCEEEEEEEEEETTTTTS-SCCEEEEECTTTTCCEEEECCCCCCCCCCCCCCCSSSCCEEEECCCHHHHHSTTSC
T ss_pred ceecCCcEEEEEEEEEcchhcCC-CcEEEEEEeCCCCccceeeccCCCCCCccccCCCCcCcEEEEeCCChHHhcccCCC
Confidence 000001 12468999999889 999999999988754444443221000 00 00001233333333222 789999
Q ss_pred EEEEEEEEeeC----CCeeEEeeCCEEec
Q psy14060 254 ARFDAKISATK----PLDVYWLKVSSLSD 278 (283)
Q Consensus 254 v~L~C~~~g~p----~~~v~W~~~g~~l~ 278 (283)
+.|.|.+.|.+ .+.|.|+++|..+.
T Consensus 248 ~~L~C~~~g~~p~P~~~~i~W~k~~~~~~ 276 (434)
T 1igy_B 248 PKVTCVVVDISKDDPEVQFSWFVDNVEVH 276 (434)
T ss_dssp CEEEEEECCCCSSCCCCCBCBBSSSCCBC
T ss_pred cEEEEEEeccccCCCCeEEEEEeCCcccC
Confidence 99999999874 34899999997764
No 116
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.84 E-value=1.6e-20 Score=146.49 Aligned_cols=163 Identities=17% Similarity=0.154 Sum_probs=116.0
Q ss_pred eeeecCcEEEEEEEccCccce-EEeec------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEec
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITA------------------TETTEMEHKGKIQERVVDASELDDDGYYAITERKY 119 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 119 (283)
.+.+|+.+.|.|.+.|.|... .|... ..++.... ..|.|.+++.+|+|.|+|.+.|.
T Consensus 12 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~L~i~~v~~~D~G~Y~C~~~~~ 87 (212)
T 1f97_A 12 QVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFSS----SGITFSSVTRKDNGEYTCMVSEE 87 (212)
T ss_dssp EEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEET----TEEEESCCCGGGCEEEEEEEEET
T ss_pred EEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEeec----eeEEEcccCcccCeEEEEEEEcc
Confidence 366788999999999877322 22221 23333331 67999999999999999999997
Q ss_pred ce---eeeeeccCCCCCCeEEecCCceeecCCCcEEEEEE-EeeecCCEEEEEeCCE-ecCCCCC-------eEEEEeCC
Q psy14060 120 YA---LSDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVE-FDGDPLPTIKWFREDF-PITSSPD-------FQIHTFST 187 (283)
Q Consensus 120 ~~---~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~-~~g~p~~~~~W~k~~~-~~~~~~~-------~~~~~~~~ 187 (283)
.+ ......+.+..+|.+........+..|+.+.|.|. +.+.|.+.+.|++++. .+..... ........
T Consensus 88 ~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 167 (212)
T 1f97_A 88 GGQNYGEVSIHLTVLVPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFTIDPK 167 (212)
T ss_dssp TSSSEEEEEEEEEEEBCCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESBC-----CBSCSSSCEEECTT
T ss_pred CCCcccEEEEEEEEEcCCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccccccccccccccCceeEecCC
Confidence 54 23334445555665554445567889999999999 6889999999999999 7764322 11222233
Q ss_pred EEEEEEcCCCCCCCEEEEEEEEeCCceeEE--EEEEEEEe
Q psy14060 188 KSILIMRQVFMEDSGVFAVIAENRGGKAKC--SANLVVEE 225 (283)
Q Consensus 188 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~v~~ 225 (283)
...|.|.++..+|.|.|+|.|.|..|.... .+.|.|.+
T Consensus 168 ~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 207 (212)
T 1f97_A 168 SGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMDAVE 207 (212)
T ss_dssp TCCEEESSCCGGGCEEEEEEEECSSSCCEECCCEEEEEES
T ss_pred CceEEEEecChhhCcEEEEEEccccCCccccceEEEEEEE
Confidence 457999999999999999999999998733 45666554
No 117
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.84 E-value=3.4e-20 Score=140.75 Aligned_cols=163 Identities=9% Similarity=0.031 Sum_probs=115.3
Q ss_pred CCCceeeecCC-eeeecCcEEEEEEEccCccc--eEEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeee
Q psy14060 48 PEPSASGVHGK-EIHTAKSQQVQKEKKGDKEI--VRKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSD 124 (283)
Q Consensus 48 ~~p~~~~~~~~-~v~~g~~v~l~C~~~g~~~i--~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~ 124 (283)
++|.+...+.. .+.+|+.+.|.|.+.+.+.. ..|...+... . .....|.|.+++.+|+|.|+|.+.|.....
T Consensus 6 ~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~--~--~~~~~L~i~~~~~~d~G~Y~C~~~n~~~s~- 80 (175)
T 1fnl_A 6 PKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLI--S--SQASSYFIDAATVNDSGEYRCQTNLSTLSD- 80 (175)
T ss_dssp CCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEE--E--SSCSEEEESSCCGGGCEEEEEECSSSCCCC-
T ss_pred CCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEc--c--CCceEEEEeCCCcccCEEEEEEeeCCcccc-
Confidence 45666655553 68889999999999998732 2455443322 2 245689999999999999999998865422
Q ss_pred eeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCC-EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEE
Q psy14060 125 LSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGV 203 (283)
Q Consensus 125 ~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 203 (283)
...+.+..++.... .....+..|+.+.|.|.+.+.+.+ .+.|+|++..+... .....|.|.++..+|+|.
T Consensus 81 ~~~l~V~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~~~--------~~~~~L~i~~v~~~d~G~ 151 (175)
T 1fnl_A 81 PVQLEVHIGWLLLQ-APRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYF--------HHNSDFHIPKATLKDSGS 151 (175)
T ss_dssp CEEEEEECSSEEEE-CSCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEE
T ss_pred cEEEEEeCCCceee-CCCceecCCCCEEEEEEcCCCCCceEEEEEECCeEccCC--------CCCCEEEEcccChhhCeE
Confidence 22233333444333 344678899999999999876654 99999999876321 112359999999999999
Q ss_pred EEEEEEeCCce-eEEEEEEEEE
Q psy14060 204 FAVIAENRGGK-AKCSANLVVE 224 (283)
Q Consensus 204 Y~C~a~n~~g~-~~~~~~l~v~ 224 (283)
|+|.|.|..+. .+..+.|.|.
T Consensus 152 Y~C~a~n~~~~~~s~~~~l~V~ 173 (175)
T 1fnl_A 152 YFCRGLVGSKNVSSETVNITIT 173 (175)
T ss_dssp EEEEEEETTEEEECCCEEEEEE
T ss_pred EEEEEEcCCCCccCccEEEEEe
Confidence 99999997664 3334666665
No 118
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.84 E-value=4.7e-19 Score=141.85 Aligned_cols=166 Identities=10% Similarity=0.082 Sum_probs=115.1
Q ss_pred eeeecCcEEEEEEEccCc--cce-EEee-------------------------cCCCEEEEE--cCCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK--EIV-RKIT-------------------------ATETTEMEH--KGKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~--~i~-~~~~-------------------------~~~~~~~~~--~~~~~~L~i~~~~~~D 108 (283)
.+.+|+.++|.|.+.|.| ... .|.. ...++.+.. .++..+|.|.+++.+|
T Consensus 13 ~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 92 (247)
T 2ghw_B 13 VVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAED 92 (247)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCCHHH
Confidence 467788999999999875 211 2322 124666554 2457899999999999
Q ss_pred CeEEEEEEEeccee---eeeeccCCC---------------CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEe-
Q psy14060 109 DGYYAITERKYYAL---SDLSEQKPA---------------KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFR- 169 (283)
Q Consensus 109 ~G~Y~C~a~n~~~~---~~~~~~~~~---------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k- 169 (283)
+|.|+|.+.|..+. .....+.+. .++.+...+....+.+|+++.|.|.+.+.|.+.+.|+|
T Consensus 93 ~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~ 172 (247)
T 2ghw_B 93 TAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLAWYQQ 172 (247)
T ss_dssp CEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEE
T ss_pred CEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEEEEEE
Confidence 99999999987221 111122222 24455666677789999999999999998889999999
Q ss_pred -CCEec------------CCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeE-EEEEEEEE
Q psy14060 170 -EDFPI------------TSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVE 224 (283)
Q Consensus 170 -~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~ 224 (283)
++..+ ....++.+.......+|.|.++..+|+|.|+|.+.|...... ....|.|.
T Consensus 173 ~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~~~~g~~t~l~V~ 241 (247)
T 2ghw_B 173 KPGQAPRPLIYDASTRATGIPDRFSGSGSGTDFTLTISRLEPEDFAVYYCQQRSNWPPTFGQGTKVEVK 241 (247)
T ss_dssp CTTSCCEEEEETTTEECTTCCTTEEEECSSSEEEEEECSCCGGGCEEEEEEECSSSSCEECCCEEEEEC
T ss_pred CCCCCcEEEEEEeccCCCccCCCEEEecCCCeEEEEECcCCHHHCEEEEEEEccCCCceEcCCEEEEEC
Confidence 44432 112355554445567899999999999999999988643322 22455554
No 119
>2oz4_A Intercellular adhesion molecule 1; IGSF domain, structural plasticity, cell-surface dimerizatio adhesion; HET: NAG FUC; 2.70A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 b.1.1.4 PDB: 1p53_A*
Probab=99.84 E-value=2.5e-20 Score=150.94 Aligned_cols=183 Identities=13% Similarity=0.086 Sum_probs=133.8
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEEEEEcCCEEEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEMEHKGKIQER 99 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~~~~~~~~~L 99 (283)
-+.|.|+|..|..+....|.|...+. |.+.. ....+.+|+.+.|.|.+...+.+ .| .+... ...+....|
T Consensus 75 ~Y~C~a~n~~~~~~~~~~l~V~~~p~----p~~~~-~~~~v~~G~~v~l~C~~~p~~~i-~W--~g~~~--~~~~~~~~l 144 (265)
T 2oz4_A 75 RLTCAVILGNQSQETLQTVTIYSFPA----PNVIL-TKPEVSEGTEVTVKCEAHPRAKV-TL--NGVPA--QPLGPRAQL 144 (265)
T ss_dssp EEEEEEEETTEEEEEEEEEEEECCCC----CEEEE-SCSEEETTCEEEEEEECCTTSEE-EE--SSCSS--SCCSSEECC
T ss_pred eEEEEEecCCCCcEEEEEEEEeCCCC----ceeec-CCceecCCCcEEEEEEccCCCEE-EE--CCEEc--cCCCCcEEE
Confidence 48899999999999999999987532 33332 23347789999999999833344 44 22222 223456778
Q ss_pred EEccCCCCCCeEEEEEEEecc-eee----eeeccCCCCCCeEEec--CCceeecCCCcEEEEEEEeeecCCEEEEEeCCE
Q psy14060 100 VVDASELDDDGYYAITERKYY-ALS----DLSEQKPAKPPVFTKK--IQPCRAFEQDQARFEVEFDGDPLPTIKWFREDF 172 (283)
Q Consensus 100 ~i~~~~~~D~G~Y~C~a~n~~-~~~----~~~~~~~~~~p~~~~~--~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~ 172 (283)
.|..+..+|.|.|+|.+.|.. |.. ....+.+..+|.+... +....+.+|+.+.|.|.+.|.|.|.+.|++++.
T Consensus 145 ~i~~~~~~~~g~Y~C~a~n~~~g~~~~~s~~~~l~V~~~p~~~~~~~p~~~~v~~g~~~~l~C~~~g~P~p~i~W~~~~~ 224 (265)
T 2oz4_A 145 LLKATPEDNGRSFSCSATLEVAGQLIHKNQTRELRVLYGPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGT 224 (265)
T ss_dssp EEECCGGGTTEEEEEEEEEECSSSEEEEEEEEEEEEEEEEECCGGGSCSEEEEETTCEECCCCCCEEESCCEEEEEETTT
T ss_pred EEccccccCCceEEEEEEcCCCCCcccccccEEEEEEeCCccccccCCCccEEcCCCeEEEEeECccCCCCeEEEEECCc
Confidence 899999999999999998643 321 3344555556655433 345678899999999999999999999999987
Q ss_pred ecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 173 PITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
.+..... +. .+..+|+|.|+|.|.|..|.....+.|.|..
T Consensus 225 ~~~~~g~-----------~~--~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 264 (265)
T 2oz4_A 225 FPLPIGE-----------SV--TVTRDLEGTYLCRARSTQGEVTREVTVNVLS 264 (265)
T ss_dssp EECCTTS-----------CE--ECCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred ccCCCCc-----------EE--EeehhhCeEEEEEEECCCCcEEEEEEEEEec
Confidence 3332211 21 2777999999999999999999999988873
No 120
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.84 E-value=1.8e-20 Score=147.32 Aligned_cols=155 Identities=13% Similarity=0.289 Sum_probs=116.8
Q ss_pred eeeecCcEEEEEEEccCccce-EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee--eeeccCCC----
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALS--DLSEQKPA---- 131 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~--~~~~~~~~---- 131 (283)
.+.+|+.+.|.|.+.|.|... .|...+... ..+....|.|.+++.+|+|.|+|.+.|..+.. ....+.+.
T Consensus 29 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~---~~~~~~~L~i~~v~~~d~G~Y~C~~~n~~~~~~s~~~~l~V~~~~~ 105 (218)
T 3k0w_A 29 AVLAGQFVKLCCRATGHPFVQYQWFKMNKEI---PNGNTSELIFNAVHVKDAGFYVCRVNNNFTFEFSQWSQLDVCDIPE 105 (218)
T ss_dssp EEETTSBEEEECEETTTTSSEEEEEETTEEC---TTCCSSEEEETTCCGGGCEEEEEEEECTTCCEECCCEEEEEECCCG
T ss_pred EEeCCCcEEEEeeecCCCCCEEEEEECCEEC---CCCCCCEEEEccCChhhCeEeEEEEEcCCCCceeeEEEEEEEccCc
Confidence 467788999999999987433 444332211 11234579999999999999999999986632 11122221
Q ss_pred -----------CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCC
Q psy14060 132 -----------KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMED 200 (283)
Q Consensus 132 -----------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 200 (283)
.+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+..... ..|.|.++..+|
T Consensus 106 ~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~~~---------~~L~i~~v~~~d 176 (218)
T 3k0w_A 106 SFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHETK---------KLYMVPYVDLEH 176 (218)
T ss_dssp GGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTCCS---------SEEEESSCCGGG
T ss_pred ccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCCCC---------CEEEEeecChhc
Confidence 236777777788899999999999999999999999999998875432 369999999999
Q ss_pred CEEEEEEEEeCCce-eEEEEEEEEEe
Q psy14060 201 SGVFAVIAENRGGK-AKCSANLVVEE 225 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~-~~~~~~l~v~~ 225 (283)
.|.|+|.|.|..|. .+..+.|.|..
T Consensus 177 ~G~Y~C~a~n~~g~~~s~~~~l~V~~ 202 (218)
T 3k0w_A 177 QGTYWCHVYNDRDSQDSKKVEIIIDE 202 (218)
T ss_dssp CEEEEEEEECSSCEEECCCEEEEECC
T ss_pred CEEEEEEEEcCCCCceeeeEEEEEeC
Confidence 99999999998887 44456666654
No 121
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.84 E-value=8.5e-20 Score=153.66 Aligned_cols=173 Identities=12% Similarity=0.076 Sum_probs=127.1
Q ss_pred CCceeeecC-CeeeecCcEEEEEEEccCccce-EEeecCCCEEEE----EcCCEEEEEEccCCCCCCe-EEEEEEEecce
Q psy14060 49 EPSASGVHG-KEIHTAKSQQVQKEKKGDKEIV-RKITATETTEME----HKGKIQERVVDASELDDDG-YYAITERKYYA 121 (283)
Q Consensus 49 ~p~~~~~~~-~~v~~g~~v~l~C~~~g~~~i~-~~~~~~~~~~~~----~~~~~~~L~i~~~~~~D~G-~Y~C~a~n~~~ 121 (283)
.|.+..... ..+.+|+.+.|.|.+.|.|... .|.......... .......|.|.+++.+|+| .|+|.+.|..+
T Consensus 158 ~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~~Y~C~a~n~~g 237 (347)
T 2ifg_A 158 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVMKSGGLPSLGLTLANVTSDLNRKNVTCWAENDVG 237 (347)
T ss_dssp CCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEECCCCCSSEEEEEEESCCSTTTTCCEEECCEETTE
T ss_pred CCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccccceecccceEEEeeCChHHCCCeEEEEEEcCCC
Confidence 455554332 2477888999999999988332 333332211111 2235788999999999999 99999999987
Q ss_pred e-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeC-------CEEEEEE
Q psy14060 122 L-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS-------TKSILIM 193 (283)
Q Consensus 122 ~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~-------~~~~l~i 193 (283)
. .....+.+..+|.+ .......|+.+.|.|.+.|.|.|.+.|++++..+............ ...+|.|
T Consensus 238 ~~~~~~~l~V~~~P~i----~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~~~~~~L~I 313 (347)
T 2ifg_A 238 RAEVSVQVNVSFPASV----QLHTAVEMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRL 313 (347)
T ss_dssp ECCEEECCCCBEEEEE----EECCCEESSSEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEECCCCTTCCCEEEEEEE
T ss_pred CEEEEEEEEEcCCCee----eeccCccCceEEEEEEeeecCCCcEEEEeCCEECCCCcceeeEEEeecCCCcccceEEEE
Confidence 4 34455666666764 1123456899999999999999999999999998865544332221 2557999
Q ss_pred cCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 194 RQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 194 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
.++..+|+|.|+|.|.|..|.....+.+.|.+
T Consensus 314 ~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 314 NQPTHVNNGNYTLLAANPFGQASASIMAAFMD 345 (347)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEECSCC
T ss_pred CCCCcccCceEEEEEecCCCceeeEEEEEecC
Confidence 99999999999999999999988888887764
No 122
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.84 E-value=3.9e-19 Score=147.33 Aligned_cols=193 Identities=11% Similarity=0.024 Sum_probs=132.7
Q ss_pred eEEEEE-cCCeeeeeeeEEEEeCCCCCCCCCceeeecCC-eeeecCcEEEEEEEc-cCccce-EEeecCCCEEEE-----
Q psy14060 21 KSRTAS-SDRSGVSTEETKIIDGRKVSVPEPSASGVHGK-EIHTAKSQQVQKEKK-GDKEIV-RKITATETTEME----- 91 (283)
Q Consensus 21 ~~~~a~-n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~-~v~~g~~v~l~C~~~-g~~~i~-~~~~~~~~~~~~----- 91 (283)
+.|.|. +..|..+....|.+...| .+...... .+..++.+.+.|.+. |.|... .|..........
T Consensus 94 Y~C~v~~~~~~~~~~~~~l~v~~~P------~~~~~~~~~~~~~~~~~~~~C~~~~~~P~~~i~W~~~~~~~~~~~~~~~ 167 (313)
T 4fqp_A 94 YTCLFVTFPQGSRSVDIWLRVLAKP------QNTAEVQKVQLTGEPVPMARCVSTGGRPPAQITWHSDLGGMPNTSQVPG 167 (313)
T ss_dssp EEEEEECSSSCEEEEEEEECCBBCC------EEEEEECCBCCCSSCEEEEEEEEEEEBSCCEEEEEETTCCEEEEEEEEC
T ss_pred EEEEEeeccCcceeeeeeeeeccCC------cceecccceEeecCceEEEEEEccCccCCcEEEeecCCccccccceeee
Confidence 456664 556667777777666543 33322222 244455688899775 556333 444333222111
Q ss_pred -EcCC---EEEEEEccCCCCCCeEEEEEEEeccee---eeeeccCCCCCCeEEec-CCceeecCCCcEEEEEEEeeecCC
Q psy14060 92 -HKGK---IQERVVDASELDDDGYYAITERKYYAL---SDLSEQKPAKPPVFTKK-IQPCRAFEQDQARFEVEFDGDPLP 163 (283)
Q Consensus 92 -~~~~---~~~L~i~~~~~~D~G~Y~C~a~n~~~~---~~~~~~~~~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~p~~ 163 (283)
..+. ...|.|.++...|.|.|+|.+.|..+. .....+.+..+|.+... .....+..|+.+.|.|.+.|.|.|
T Consensus 168 ~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p 247 (313)
T 4fqp_A 168 FLSGTVTVTSLWILVPSSQVDGKNVTCKVEHESFEKPQLLTVNLTVYYPPEVSISGYDNNWYLGQNEATLTCDARSNPEP 247 (313)
T ss_dssp SSTTCEEEEEEEEECCCGGGTTCEEEEEEECTTSSSCEEEEEECCBCEEEEEEEECCCSCEETTCCCEEEEEEEEEESCC
T ss_pred ecccccccceeeeecccccccCeeEEEEEEccCcCccceeeeecccccCCccccccccceeecCCCeEEEEEEecCCCCC
Confidence 1111 245889999999999999999997652 33345666667877544 344556778899999999999998
Q ss_pred -EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 164 -TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 164 -~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
.+.|+|++..+.... .. .+ .+|.|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 248 ~~v~W~~~~~~l~~~~---~~-~~--~~L~i~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 304 (313)
T 4fqp_A 248 TGYNWSTTMGPLPPFA---VA-QG--AQLLIRPVDKPINTTLICNVTNALGARQAELTVQVKE 304 (313)
T ss_dssp CEEEEEETTBSCCTTE---EE-ET--TEEEECCCSSCCEEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred cEEEEEECCEECCCce---EE-eC--CEEEECcCChhhCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 699999999876431 11 12 2699999999999999999999999999999999986
No 123
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.84 E-value=4.4e-20 Score=144.38 Aligned_cols=161 Identities=12% Similarity=0.136 Sum_probs=114.8
Q ss_pred eeeecCcEEEEEEEccCccce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|+.++|.|.+.|.+... .|.. ...++.+........|.|.+++.+|+|.|+|.+.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 90 (213)
T 3mj8_L 11 SVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEADYYCQSW 90 (213)
T ss_dssp EEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred EEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCEEEEEEec
Confidence 467788999999999777222 3332 2346666666778899999999999999999999
Q ss_pred ecce--e--eeeeccCCC----CCCeEEecCCceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEecCCCCC--eEEEEe
Q psy14060 118 KYYA--L--SDLSEQKPA----KPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPITSSPD--FQIHTF 185 (283)
Q Consensus 118 n~~~--~--~~~~~~~~~----~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~~~~~--~~~~~~ 185 (283)
|..+ . .....+.+. .+|.+...+....+..|+.+.|.|.+.+. |. +.+.|++++..+..... ......
T Consensus 91 ~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~ 170 (213)
T 3mj8_L 91 DGTNSAWVFGSGTKVTVLGQPNAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPITQGVKTTQPSKSD 170 (213)
T ss_dssp ETTTTEEEEBCCEEEEEECSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEET
T ss_pred cCCcceeEEcCceEEEEeCCCCCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCcccCCCcccCCcCccC
Confidence 8865 1 112222222 57777766666666689999999999986 33 49999999998864311 001111
Q ss_pred C---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE
Q psy14060 186 S---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 186 ~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 219 (283)
+ ....|.|..+..+|.|.|+|.|.|..+.....+
T Consensus 171 ~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~ 207 (213)
T 3mj8_L 171 SKYMATSYLTMTADAWKSRNTFICKVTHGGNTVEKSL 207 (213)
T ss_dssp TEEEEEEEEEEESHHHHSCSCEEEEEEETTEEEEEEE
T ss_pred CcEEEEEEEEEeHHHcCCCCEEEEEEEECCccEEeee
Confidence 1 124589999999999999999999986655443
No 124
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.84 E-value=2.9e-20 Score=145.85 Aligned_cols=173 Identities=17% Similarity=0.225 Sum_probs=118.9
Q ss_pred CCceeeecCC-eeeecCcEEEEEEEccCccce-EEeecCC--------CEEEEEcCC--EEEEEEccCCCCCCeEEEEEE
Q psy14060 49 EPSASGVHGK-EIHTAKSQQVQKEKKGDKEIV-RKITATE--------TTEMEHKGK--IQERVVDASELDDDGYYAITE 116 (283)
Q Consensus 49 ~p~~~~~~~~-~v~~g~~v~l~C~~~g~~~i~-~~~~~~~--------~~~~~~~~~--~~~L~i~~~~~~D~G~Y~C~a 116 (283)
.|.+...+.. .+.+|+.+.|.|.+.|.|... .|...+. ...+....+ ...|.|.+++.+|+|.|+|.+
T Consensus 9 ~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~~ 88 (217)
T 2vr9_A 9 SPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWCVA 88 (217)
T ss_dssp CCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEEEE
T ss_pred CCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEEEE
Confidence 4444433332 366788999999999877332 3322111 112222222 223478899999999999999
Q ss_pred Eecceeee--eeccCCCC-CCeEEecCCceeecCCCcEEEEEEE-eeecCCEEEEEeCCEecCCC--------CCeEEEE
Q psy14060 117 RKYYALSD--LSEQKPAK-PPVFTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFREDFPITSS--------PDFQIHT 184 (283)
Q Consensus 117 ~n~~~~~~--~~~~~~~~-~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~~~W~k~~~~~~~~--------~~~~~~~ 184 (283)
.|..+... ...+.+.. +|.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+... .++.+.
T Consensus 89 ~n~~g~~~~~~~~l~v~~~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~- 167 (217)
T 2vr9_A 89 KNRVGQAVSRHASLQIAVLRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDDLKAMSFGASSRVRIV- 167 (217)
T ss_dssp EETTEEEECCCEEEEECEECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECCCCCC---CCCSEEEE-
T ss_pred ecCCCccccccceEEEEEeCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCcccccccccCCcEEec-
Confidence 99877432 22233322 4555556667788999999999999 89999999999999988732 222222
Q ss_pred eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 185 FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 185 ~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
....|.|.++..+|.|.|+|.|.|..|.......+.+.
T Consensus 168 --~~~~L~i~~~~~~d~G~Y~C~a~N~~G~~~~~~~~lv~ 205 (217)
T 2vr9_A 168 --DGGNLLISNVEPIDEGNYKCIAQNLVGTRESSYAKLIV 205 (217)
T ss_dssp --TTTEEEESSCCSTTCEEEEEEEEETTEEEECCCEEEEE
T ss_pred --CCCcEEEeeCCHHHCeEEEEEEEcccceeccccEEEEE
Confidence 12369999999999999999999999988776555444
No 125
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.83 E-value=2.7e-20 Score=144.97 Aligned_cols=165 Identities=10% Similarity=0.060 Sum_probs=115.8
Q ss_pred CCCceeeecC-CeeeecCcEEEEEEEccCccc--eEEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeee
Q psy14060 48 PEPSASGVHG-KEIHTAKSQQVQKEKKGDKEI--VRKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSD 124 (283)
Q Consensus 48 ~~p~~~~~~~-~~v~~g~~v~l~C~~~g~~~i--~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~ 124 (283)
++|.+...+. ..+.+|+.++|.|.+.+.+.. ..|...+. .+.. ....|.|.+++.+|+|.|+|.+.|.... .
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~--~l~~--~~~~L~i~~v~~~D~G~Y~C~a~n~~~s-~ 80 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNES--LISS--QASSYFIDAATVDDSGEYRCQTQLSTLS-D 80 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTE--EESC--CSSEEEESSCCGGGCEEEEEEETTSBCC-C
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCE--Eccc--CccEEEEecccccCCEEEEEEeCCCccc-c
Confidence 3455555444 358889999999999998732 24444332 2211 2368999999999999999999875332 2
Q ss_pred eeccCCCCCCeEEecCCceeecCCCcEEEEEEEeee-cCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEE
Q psy14060 125 LSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGV 203 (283)
Q Consensus 125 ~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 203 (283)
...+.+..+|.+...+. ..+.+|+.+.|.|.+.+. |.+.+.|+|++..+... .....|.|.++..+|+|.
T Consensus 81 ~~~l~V~~~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~~~--------~~~~~L~i~~v~~~D~G~ 151 (204)
T 3sgj_C 81 PVQLEVHIGWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRKYF--------HHNSDFYIPKATLKDSGS 151 (204)
T ss_dssp CEEEEEECSSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEEEE--------EECCCEEESSCCGGGCEE
T ss_pred cEEEEEecCceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEeecc--------cCCceEEECcCCcccCEE
Confidence 23344445565544443 678899999999999665 56789999999875321 112359999999999999
Q ss_pred EEEEEEeCC-ceeEEEEEEEEEec
Q psy14060 204 FAVIAENRG-GKAKCSANLVVEEK 226 (283)
Q Consensus 204 Y~C~a~n~~-g~~~~~~~l~v~~~ 226 (283)
|+|.|.|.. +..+..+.|.|.+.
T Consensus 152 Y~C~a~n~~~~~~s~~~~l~V~~~ 175 (204)
T 3sgj_C 152 YFCRGLVGSKNVSSETVQITITQG 175 (204)
T ss_dssp EEEEEEETTEEEECCCEEEEEEC-
T ss_pred EEEEEEeCCCceecCcEEEEEeCc
Confidence 999999954 44455577887753
No 126
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.83 E-value=1.6e-20 Score=145.97 Aligned_cols=126 Identities=13% Similarity=0.163 Sum_probs=102.1
Q ss_pred ceeecCCCcEEEEEE---EeeecCCEEEEEeCCEecC-----------------CCCCeEEEEeCCEEEEEEcCCCCCCC
Q psy14060 142 PCRAFEQDQARFEVE---FDGDPLPTIKWFREDFPIT-----------------SSPDFQIHTFSTKSILIMRQVFMEDS 201 (283)
Q Consensus 142 ~~~~~~g~~v~l~C~---~~g~p~~~~~W~k~~~~~~-----------------~~~~~~~~~~~~~~~l~i~~~~~~d~ 201 (283)
.+++..|+.++|.|. +.+.|.+.++|+|++..+. ...++.+........|.|.++..+|+
T Consensus 2 ~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 81 (203)
T 4fa8_A 2 AVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHRSANTFFLVVTAANISHD 81 (203)
T ss_dssp CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEEETTEEEEEESSCCGGGC
T ss_pred CeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEEcCCEEEEEEccCCHHHC
Confidence 457889999999995 5677999999999764221 11234556667778999999999999
Q ss_pred EEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEe
Q psy14060 202 GVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLS 277 (283)
Q Consensus 202 G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l 277 (283)
|.|+|.+.|..|.....+.|.|.. ||.+...+....+.+|+.+.|.|.+.|.|.|.|+|++++..+
T Consensus 82 G~Y~C~a~n~~g~~~~~~~l~V~~----------p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~ 147 (203)
T 4fa8_A 82 GNYLCRMKLGETEVTKQEHLSVVK----------PLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVE 147 (203)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEE----------EEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC----
T ss_pred eEEEEEEEcCCCcEEEEEEEEecC----------CceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeee
Confidence 999999999999999889999874 677777777778899999999999999999999999866433
No 127
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.83 E-value=1.2e-19 Score=139.39 Aligned_cols=138 Identities=22% Similarity=0.326 Sum_probs=114.9
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC-CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS-SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+... ...|.|.++..+|+|.|+|.+.
T Consensus 5 ~~~P~i~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~~~~~~~~~~~~~~~~--~~~L~i~~~~~~d~G~Y~C~~~ 82 (192)
T 2iep_A 5 PKAPVITTPLETVDALVEEVATFMCAVESYPQPEISWTRNKILIKLFDTRYSIREN--GQLLTILSVEDSDDGIYCCTAN 82 (192)
T ss_dssp CEEEEESSCCCEEEEETTSCEEEECCEEEESCCEEEEEETTEECCTTCTTEEEEGG--GTEEEESSCCGGGCEEEEEEEE
T ss_pred CCCceeecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECCEEccccCccEEEcCC--ccEEEEcCCCcccCeEEEEEEE
Confidence 4467777777778899999999999999999999999999998865 344544332 3369999999999999999999
Q ss_pred eCCce-eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 210 NRGGK-AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 210 n~~g~-~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
|..|. ......+.|.. +|.+...+....+..|+.+.|.|.+.|.|.+.+.|+++|..+...
T Consensus 83 ~~~~~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~~~~~~~ 144 (192)
T 2iep_A 83 NGVGGAVESCGALQVKM----------KPKITRPPINVKIIEGLKAVLPCTTMGNPKPSVSWIKGDSALREN 144 (192)
T ss_dssp CSSSCCEEEEEEEEEEE----------EEEEEECCCCEEEETTSCEEECCEEEEESCCEEEEEETTEECCCC
T ss_pred cCCCceeEeEEEEEEEe----------CCccccCCcceEEeCCCcEEEEEEEeccCCceEEEEeCCEEccCC
Confidence 98877 45556777774 577777777888999999999999999999999999999988654
No 128
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.83 E-value=6.2e-19 Score=135.38 Aligned_cols=130 Identities=15% Similarity=0.154 Sum_probs=109.0
Q ss_pred CCCeEEecCCceeecC-CCcEEEEEEEeeecC--CEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEE
Q psy14060 132 KPPVFTKKIQPCRAFE-QDQARFEVEFDGDPL--PTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~-g~~v~l~C~~~g~p~--~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 208 (283)
.+|.+.. +....+.. |+.+.|.|.+.+.|. +.+.|++++..+....... ....|.|.++..+|+|.|+|.+
T Consensus 2 ~~P~i~~-~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~~ 75 (190)
T 2wv3_A 2 NEPRIVT-SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNGVELTATRKNA-----SNMEYRINKPRAEDSGEYHCVY 75 (190)
T ss_dssp -CCEEEE-CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETTEECTTCCBCC-----SEEEEEESSCCGGGCEEEEEEE
T ss_pred CCCcccc-cceEEEccCCceEEEEEEeccCCCCceEEEEEECCEECcccceEe-----ccEEEEEecCCcccCEEEEEEE
Confidence 3676665 34455666 999999999998887 7899999999887643221 4467999999999999999999
Q ss_pred EeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEee--CCEEec
Q psy14060 209 ENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLK--VSSLSD 278 (283)
Q Consensus 209 ~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~--~g~~l~ 278 (283)
.|. +.....+.|.|.. +|.+...+....+.+|+.+.|.|.+.|.|.|.+.|++ +|..+.
T Consensus 76 ~n~-~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~ 136 (190)
T 2wv3_A 76 HFV-SAPKANATIEVKA----------APDITGHKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEE 136 (190)
T ss_dssp EET-TEEEEEEEEEEEC----------CCEEEEECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEE
T ss_pred EeC-CcccccEEEEEec----------CCcccccCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceee
Confidence 999 8888888888884 7888888888889999999999999999999999999 888775
No 129
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.83 E-value=3.1e-20 Score=145.55 Aligned_cols=164 Identities=9% Similarity=-0.085 Sum_probs=109.0
Q ss_pred eeeec--CcEEEEEEEccCc-cceEEe--------ecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeee--
Q psy14060 59 EIHTA--KSQQVQKEKKGDK-EIVRKI--------TATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSDL-- 125 (283)
Q Consensus 59 ~v~~g--~~v~l~C~~~g~~-~i~~~~--------~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~-- 125 (283)
.+.+| +.++|.|.+.+.+ .++... ....++... ....|.|.+++.+|+|.|+|.+.|..+....
T Consensus 18 ~v~eG~~~~v~L~C~~~~p~~~v~w~~~~~~g~~~~~~~~~~~~---~~~~l~I~~v~~~D~G~Y~C~a~n~~~~~~s~~ 94 (213)
T 2x1w_L 18 YITENKNKTVVIPCLGSISNLNVSLCARYPEKRFVPDGNRISWD---SKKGFTIPSYMISYAGMVFCEAKINDESYQSIM 94 (213)
T ss_dssp EECCSTTCEEEECCCBSSTTCCEEEEEETTTEEECCCSSSCEEE---TTTEEEEEGGGTTTCSEEEEEEC----CEECCC
T ss_pred EEecCCCccEEEeeccCCCCcEEEEEhhcCCCccccCCCccccc---CCccEEEccCChhcCceEEEEEEECCeeEEEEE
Confidence 36678 8999999998743 333111 112233332 2235899999999999999999885442211
Q ss_pred eccCC--CCCCeEEecC-CceeecCCCcEEEEEEEeeec--CCEEEEEeCCEecCCCCC-eEEEE-------eCCEEEEE
Q psy14060 126 SEQKP--AKPPVFTKKI-QPCRAFEQDQARFEVEFDGDP--LPTIKWFREDFPITSSPD-FQIHT-------FSTKSILI 192 (283)
Q Consensus 126 ~~~~~--~~~p~~~~~~-~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~~~~~~~~~-~~~~~-------~~~~~~l~ 192 (283)
..+.+ ..+|.+...+ ....+..|+.+.|.|.+.|.| .+.+.|++++..+..... ..... .....+|.
T Consensus 95 ~~l~v~~~~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 174 (213)
T 2x1w_L 95 YIVVVVGYRIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLT 174 (213)
T ss_dssp EEEEECBCCEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEEEEEEEE
T ss_pred EEEEEeCCcccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCccceeeeEEEE
Confidence 22222 2244444444 344889999999999999855 358999999876432111 00000 11235799
Q ss_pred EcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 193 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 175 I~~v~~~D~G~Y~C~a~N~~g~~~~~~~l~V~~ 207 (213)
T 2x1w_L 175 IDGVTRSDQGLYTCAASSGLMTKKNSTFVRVHE 207 (213)
T ss_dssp ESSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred ECCCCcccCEEEEEEEecCCCcEEEEEEEEEec
Confidence 999999999999999999999999899999885
No 130
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.83 E-value=3.5e-19 Score=151.77 Aligned_cols=137 Identities=21% Similarity=0.382 Sum_probs=116.4
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeC--CEecCC-----CCCeEEEEeCCEEEEEEcCCCCCCCEEEE
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRE--DFPITS-----SPDFQIHTFSTKSILIMRQVFMEDSGVFA 205 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~--~~~~~~-----~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 205 (283)
+|.+.. +.+..+.+|+.+.|.|.+.|.|.+.+.|+|+ +..+.. ..++.+........|.|.++..+|+|.|.
T Consensus 1 ~P~i~~-~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~ 79 (389)
T 2jll_A 1 QPHIIQ-LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGDKSLDGRIEVKGQHGSSSLHIKDVKLSDSGRYD 79 (389)
T ss_dssp CCEEEE-CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC--CCSSSSEEEEECSSEEEEEEESCCGGGCEEEE
T ss_pred CCeEEe-cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCcCCCCCeEEEeccCCcceEEEcccChhhCEEEE
Confidence 456555 5667788899999999999999999999999 887764 34566665556788999999999999999
Q ss_pred EEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 206 VIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 206 C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
|.|.|..|.....+.|.|.. +|.+...+....+.+|+.+.|.|.+.|.|.+.+.|+++|+.+...
T Consensus 80 C~a~n~~g~~~~~~~l~V~~----------~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~i~W~~~g~~l~~~ 144 (389)
T 2jll_A 80 CEAASRIGGHQKSMYLDIEY----------APKFISNQTIYYSWEGNPINISCDVKSNPPASIHWRRDKLVLPAK 144 (389)
T ss_dssp EEEECSSCEEEEEEEEEEEE----------EEEECCSCCEEEECTTCCEEEEECEEEESCCEEEEEETTEESSCT
T ss_pred EEEEeCCCCcceEEEEEEEe----------CCEEecCcceEEeccCCEEEEEEEEEecCCCeEEEEECCccCCcc
Confidence 99999999988889999885 677766555557899999999999999999999999999998754
No 131
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.83 E-value=2.5e-19 Score=139.79 Aligned_cols=144 Identities=17% Similarity=0.239 Sum_probs=105.4
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEee-ecCCEEEEEeCCEecCCCCCeEEEEeC--CEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDG-DPLPTIKWFREDFPITSSPDFQIHTFS--TKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~~~W~k~~~~~~~~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
.|.|.... ...+.+|+.+.|.|.+.+ .|.|.++|+|++..+..+.++.+.... ....|.|.++..+|+|.|+|.|.
T Consensus 3 ~p~~~~~~-~~~v~eg~~v~l~c~~~~~~P~p~i~W~kng~~l~~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~a~ 81 (207)
T 3rbs_A 3 DPFTKSEL-AVEILEKGQVRFWMQAEKLSGNAKVNYIFNEKEIFEGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQLQ 81 (207)
T ss_dssp ---CCEEE-EEEECGGGCEEEEEECSCCCSCCEEEEEETTEEECSSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEEEE
T ss_pred CCeeecCC-ceEEEeCCeEEEEEEEecCCCCCEEEEEECCEECccCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEEEE
Confidence 34444433 578899999999999964 699999999999999887777776654 56689999999999999999999
Q ss_pred eCCceeEEEEEEEEEecc-C-------CC---CCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCCeeEEeeCCEEe
Q psy14060 210 NRGGKAKCSANLVVEEKR-Q-------GG---RGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKVSSLS 277 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~~~-~-------~~---~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~~v~W~~~g~~l 277 (283)
| |.......+.+.... . .. .....+|.|...+ ...+.+|+.+.|.|.+.|. |.|.|+|+|||++|
T Consensus 82 N--g~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~~-~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~g~~l 158 (207)
T 3rbs_A 82 D--GKATNHSTVVLVGDVFKKLQKEAEFQRQEWIRKQGPHFVEYL-SWEVTGECNVLLKCKVANIKKETHIVWYKDEREI 158 (207)
T ss_dssp E--TTEEEEEEEEECTHHHHHHHHHHHHHHHHHHHHTSSEEEEEE-EEEEETTTEEEEEEEEESCCTTCEEEEEETTEEE
T ss_pred C--CCeEEEEEEEEEccchhhhcccccccccccccCCCCceEecC-CcEEcCCCcEEEEEEEeCCCCCCEEEEEECCEEC
Confidence 9 444443333221000 0 00 0000267777665 4788999999999999998 99999999999998
Q ss_pred cCC
Q psy14060 278 DVK 280 (283)
Q Consensus 278 ~~~ 280 (283)
...
T Consensus 159 ~~~ 161 (207)
T 3rbs_A 159 SVD 161 (207)
T ss_dssp CCC
T ss_pred CCC
Confidence 643
No 132
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.83 E-value=4.9e-20 Score=141.09 Aligned_cols=156 Identities=11% Similarity=0.074 Sum_probs=110.3
Q ss_pred CCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee---ee
Q psy14060 48 PEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL---SD 124 (283)
Q Consensus 48 ~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~---~~ 124 (283)
++|.+...+...+.+|+.++|.|.+.+.+....|...+.. . .. ....|.|.+++.+|+|.|+|.+.|..+. +.
T Consensus 7 ~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~W~k~g~~-~-~~--~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~ 82 (184)
T 2gi7_A 7 PKPSLQALPSSLVPLEKPVTLRCQGPPGVDLYRLEKLSSS-R-YQ--DQAVLFIPAMKRSLAGRYRCSYQNGSLWSLPSD 82 (184)
T ss_dssp CCCEEEEESCSEEETTCCEEEEEECSTTCSEEEEEETTTC-C-EE--SSSEEEESSCCGGGCEEEEEEEEETTEEBCCCC
T ss_pred CCCeEEeCCCccccCCCcEEEEEeCCCCCCEEEEEECCcc-c-cC--cccEEEECcCChhhCceEEEEEEcCCCccCCCC
Confidence 4666665555568889999999999884322255544433 1 11 3457999999999999999999997652 11
Q ss_pred eeccCC---CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCC
Q psy14060 125 LSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDS 201 (283)
Q Consensus 125 ~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~ 201 (283)
...+.+ ..+|.+...+ ...+..|+.+.|.|.+.+ +.+.+.|+|++..+....... .....|.|.++..+|+
T Consensus 83 ~~~l~V~~~~~~p~i~~~p-~~~v~~G~~v~l~C~~~~-~~~~~~w~k~g~~~~~~~~~~----~~~~~L~i~~v~~~D~ 156 (184)
T 2gi7_A 83 QLELVATGVFAKPSLSAQP-GPAVSSGGDVTLQCQTRY-GFDQFALYKEGDPAPYKNPER----WYRASFPIITVTAAHS 156 (184)
T ss_dssp CEEEEEESSSCCCEEEEEC-CCSSCCTTCEEEEEECSS-CCCEEEEEECCCCTTSCCCCE----EEEESSSEEEETTCCS
T ss_pred CEEEEecCcCCCCEEEeCC-CceecCCCcEEEEEEcCC-CCcEEEEEECCCcCcceecCC----CceEEEEEccCCccCC
Confidence 122222 3456665554 456788999999999876 457999999998776532211 1233588999999999
Q ss_pred EEEEEEEEeCCc
Q psy14060 202 GVFAVIAENRGG 213 (283)
Q Consensus 202 G~Y~C~a~n~~g 213 (283)
|.|+|.|.|..+
T Consensus 157 G~Y~C~a~n~~~ 168 (184)
T 2gi7_A 157 GTYRCYSFSSRD 168 (184)
T ss_dssp EEEEEEEECTTS
T ss_pred eEEEEEEEeCCC
Confidence 999999999754
No 133
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.83 E-value=1.3e-19 Score=149.73 Aligned_cols=196 Identities=9% Similarity=-0.037 Sum_probs=133.9
Q ss_pred eEEEEEcC-CeeeeeeeEEEEeCCCCCCCCCceeeecCC-eeeecCcEEEEEEE-ccCccce-EEeecCCCEEEE---E-
Q psy14060 21 KSRTASSD-RSGVSTEETKIIDGRKVSVPEPSASGVHGK-EIHTAKSQQVQKEK-KGDKEIV-RKITATETTEME---H- 92 (283)
Q Consensus 21 ~~~~a~n~-~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~-~v~~g~~v~l~C~~-~g~~~i~-~~~~~~~~~~~~---~- 92 (283)
+.|+|.|. .|..+....+.+...+... +...... ....|+.+.|.|.+ .|.|... .|.......... .
T Consensus 89 Y~C~a~n~~~~~~~~~~~~~v~~~~~~~----~~~~~~~~~~~~~~~~~l~C~~~~g~P~~~i~W~~~~~~~~~~~~~~~ 164 (308)
T 4fom_A 89 YICKAVTFPLGNAQSSTTVTVLVEPTVS----LIKGPDSLIDGGNETVAAICIAATGKPVAHIDWEGDLGEMESTTTSFP 164 (308)
T ss_dssp EEEEEEETTTEEEEEEEEEEEEBCCEEE----EEECSSCCCTTCSCEEEEEEEEEEEBSCCEEEECCCSSBCCEEEEECT
T ss_pred EEEEEeeCCCcceeeeeEEEeeeccccc----cccccceeEEcCCceEEEEEEecCCcCCceEEEEECCcccccccceee
Confidence 67889885 6667777777777654311 1111111 12234579999976 5777333 343332221111 0
Q ss_pred c---CCEEEEEEccCCCCCCeEEEEEEEeccee---eeeeccCCCCCCeEEecC-CceeecCCCcEEEEEEEeeecCC-E
Q psy14060 93 K---GKIQERVVDASELDDDGYYAITERKYYAL---SDLSEQKPAKPPVFTKKI-QPCRAFEQDQARFEVEFDGDPLP-T 164 (283)
Q Consensus 93 ~---~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~---~~~~~~~~~~~p~~~~~~-~~~~~~~g~~v~l~C~~~g~p~~-~ 164 (283)
. .....|.|.++..+|.|.|+|.+.|..+. .....+.+..+|.+...+ ....+..|+.+.|.|.+.|.|.| .
T Consensus 165 ~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~ 244 (308)
T 4fom_A 165 NETATIISQYKLFPTRFARGRRITCVVKHPALEKDIRYSFILDIQYAPEVSVTGYDGNWFVGRKGVNLKCNADANPPPFK 244 (308)
T ss_dssp TSCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEECCCCEEEEECCBCCCSCEETTCCSCEEECCEEEESCEEE
T ss_pred eecccccccceEEeeeecCCccEEEEEEccCCCCceEEeEEEEEecCCeeEEcccceeeeeccccEEEEEEEecCCCCcE
Confidence 0 02346999999999999999999998652 334456676777765443 33456778999999999999988 6
Q ss_pred EEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 165 IKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 165 ~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+.|+|++..+..... ......|.|.++..+|+|.|+|.|.|..|.....+.|.|.+
T Consensus 245 v~W~k~~~~~~~~~~-----~~~~~~l~i~~v~~~d~G~Y~C~A~N~~G~~~~~~~l~V~~ 300 (308)
T 4fom_A 245 SVWSRLDGQWPDGLL-----ASDNTLHFVHPLTFNYSGVYICKVTNSLGQRSDQKVIYISD 300 (308)
T ss_dssp EECCBSSSCCCSSCB-----CSTTEEECCSCCCSCCCSEEEEEEEETTEEEEEEEECCEEC
T ss_pred EEEEECCeECCCcEE-----EcCCeEEEECCCChhhCEEEEEEEEeCCCcEEEEEEEEEEc
Confidence 999999887754321 11234467889999999999999999999999999999885
No 134
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.83 E-value=5.4e-20 Score=146.53 Aligned_cols=167 Identities=14% Similarity=0.160 Sum_probs=116.9
Q ss_pred eeeecCcEEEEEEEccCccce-EEeecC------CCE-EEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee-eeeccC
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITAT------ETT-EMEHKGKIQERVVDASELDDDGYYAITERKYYALS-DLSEQK 129 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~~------~~~-~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~~ 129 (283)
.+.+|+.+.|.|.+.|.|... .|...+ .+. ..........|.|.+++.+|+|.|+|.+.|..+.. ....+.
T Consensus 26 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~~~~~l~ 105 (241)
T 3grw_A 26 AVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTCVVENKFGSIRQTYTLD 105 (241)
T ss_dssp EEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEEEEeecCCceEEEEEEE
Confidence 466788999999999987332 333221 111 11112234579999999999999999999987732 222222
Q ss_pred C----CCCCeEEe-cCCceeecCCCcEEEEEEEeeecCCEEEEEe----CCEecCCCCCe--EEEE------eCCEEEEE
Q psy14060 130 P----AKPPVFTK-KIQPCRAFEQDQARFEVEFDGDPLPTIKWFR----EDFPITSSPDF--QIHT------FSTKSILI 192 (283)
Q Consensus 130 ~----~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k----~~~~~~~~~~~--~~~~------~~~~~~l~ 192 (283)
+ ..+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+...... .... ......|.
T Consensus 106 V~~~~~~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 185 (241)
T 3grw_A 106 VLERSPHRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPDGTPYVTVLKSWISESVEADVRLR 185 (241)
T ss_dssp EECCCCCCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTTTCCCEEEEEEEECSBSEEEEEEE
T ss_pred EeccCCCCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCCCceeeeeeeEeeeeecCCceEEE
Confidence 2 12343333 3566778899999999999999999999999 77776543321 1111 01245799
Q ss_pred EcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 193 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
|.++..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 186 i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~ 218 (241)
T 3grw_A 186 LANVSERDGGEYLCRATNFIGVAEKAFWLSVHG 218 (241)
T ss_dssp ECSCCGGGCEEEEEEEECSSCEEEEEEEEEC--
T ss_pred ECcCCcccCcEEEEEEecCcceEEEEEEEEecC
Confidence 999999999999999999999999888988875
No 135
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.83 E-value=8.4e-20 Score=141.91 Aligned_cols=164 Identities=9% Similarity=-0.010 Sum_probs=109.3
Q ss_pred eecCcEEEEEEEccCccce-EEeecCC---CEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCe
Q psy14060 61 HTAKSQQVQKEKKGDKEIV-RKITATE---TTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPV 135 (283)
Q Consensus 61 ~~g~~v~l~C~~~g~~~i~-~~~~~~~---~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~ 135 (283)
.+|+.+.|.|.+.|.|... .|..... .......+....|.|.+++.+|+|.|.|.+.|..+. .....+.+..+|.
T Consensus 14 ~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~~p~ 93 (202)
T 1vca_A 14 QIGDSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEKGIQVEIYSFPK 93 (202)
T ss_dssp ETTSCEEEEEEEESCSSCEEEEEETTCCCCSSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEEEEEEEEEBCCS
T ss_pred cCCCcEEEEEeecCCCCCeEEEECCCCCCccceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEeeEEEEEEEeCCC
Confidence 3688999999999988432 4433111 112223345677999999999999999999998773 3333444444443
Q ss_pred E-EecCCceeecCCCcEEEEEEEeeecC---CEEEEEeCCEecCCCCCeEE----EEeCCEEEEEEcCCCCCCCEEEEEE
Q psy14060 136 F-TKKIQPCRAFEQDQARFEVEFDGDPL---PTIKWFREDFPITSSPDFQI----HTFSTKSILIMRQVFMEDSGVFAVI 207 (283)
Q Consensus 136 ~-~~~~~~~~~~~g~~v~l~C~~~g~p~---~~~~W~k~~~~~~~~~~~~~----~~~~~~~~l~i~~~~~~d~G~Y~C~ 207 (283)
. ...+. ..+..|+.++|.|.+.+.++ +.+.|+|++..+........ ........|.|.....+|.|.|+|.
T Consensus 94 ~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~~~~~~~~~~~~~~~~~~~~l~i~~~~~d~~g~ytC~ 172 (202)
T 1vca_A 94 DPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMKSQEFLEDADRKSLETKSLEVTFTPVIEDIGKVLVCR 172 (202)
T ss_dssp CCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEEEEECCSCCSSCCCEEEEEEEEECCCGGGTTCEEEEE
T ss_pred CCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECcccccccccCcCcceEEEEEEEEEeeeccCCCeEEEE
Confidence 2 22222 56889999999999988643 47999999987643210000 0011134577888888899999999
Q ss_pred EEeCCce-------eEEEEEEEEEe
Q psy14060 208 AENRGGK-------AKCSANLVVEE 225 (283)
Q Consensus 208 a~n~~g~-------~~~~~~l~v~~ 225 (283)
|.|..+. ......|.|..
T Consensus 173 A~n~~~~~~~~~~~~~~~~~L~V~y 197 (202)
T 1vca_A 173 AKLHIDEMDSVPTVRQAVKELQVYI 197 (202)
T ss_dssp EEECSCCCTTSCSEEEEEEECCEEC
T ss_pred EEccccCCCCcceeEeeEEEEEEec
Confidence 9998765 34556777773
No 136
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.83 E-value=2.2e-19 Score=149.76 Aligned_cols=196 Identities=11% Similarity=0.049 Sum_probs=137.3
Q ss_pred eEEE-EEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeec---CcEEEEEE-EccCccce-EEeecCCCEE----E
Q psy14060 21 KSRT-ASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTA---KSQQVQKE-KKGDKEIV-RKITATETTE----M 90 (283)
Q Consensus 21 ~~~~-a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g---~~v~l~C~-~~g~~~i~-~~~~~~~~~~----~ 90 (283)
+.|. +.|..|..+....|.|...+.....+ ......+.+| +.+.|.|. ..|.|... .|........ .
T Consensus 107 Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~---~~~~~~~~~g~~~~~~~l~C~~~~~~p~~~i~W~~~~~~~~~~~~~ 183 (331)
T 3u83_A 107 YICEFATFPTGNRESQLNLTVMAKPTNWIEG---TQAVLRAKKGQDDKVLVATCTSANGKPPSVVSWETRLKGEAEYQEI 183 (331)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEBCCEEEEEE---CSSCEEECTTCCCCEEEEEEEEEEEBSCCEEEEEESSCCEEEEEEE
T ss_pred EEEEEEecCCCccEEEEEEEEecCCcceeec---CCCceeecCCCccceEEEEEEecCCcCCceEEEEcCCCCcccccee
Confidence 4565 77778888888899998854321000 0011124455 56999998 77877433 3433211111 1
Q ss_pred EEcCC----EEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEec-CCceeecCCCcEEEEEEEeeecCCE
Q psy14060 91 EHKGK----IQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKK-IQPCRAFEQDQARFEVEFDGDPLPT 164 (283)
Q Consensus 91 ~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~p~~~ 164 (283)
....+ ...|.|.++..+|+|.|+|.+.|..+. .....+.+..+|.+... .....+..|+.+.|.|.+.+.|.|.
T Consensus 184 ~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~ 263 (331)
T 3u83_A 184 RNPNGTVTVISRYRLVPSREAHQQSLACIVNYHMDRFKESLTLNVQYEPEVTIEGFDGNWYLQRMDVKLTCKADANPPAT 263 (331)
T ss_dssp ECTTSCEEEEEEEEECCCGGGTTCEEEEEEEETTEEEEEEEECCEEEEEEEEEECCCSCCBTTCCCEEEEEEEEEESCCC
T ss_pred ECCCCcEEEEEEEEEEeccccCCCEEEEEEecCCCcceeeEEEEEecCCeEEEecCCCceEeCCCeEEEEEeCcCCCCCC
Confidence 11111 356889999999999999999999774 44455666667766543 3445688899999999999999997
Q ss_pred -EEEEeCCEecCCCCCeEEEEeCCEEEEEEc-CCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 165 -IKWFREDFPITSSPDFQIHTFSTKSILIMR-QVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 165 -~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~-~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+.|++++..+... ... .. .+|.|. ++..+|.|.|+|.|.|..|.....+.|.|..
T Consensus 264 ~i~W~~~~~~~~~~--~~~--~~--~~L~i~~~v~~~d~G~Y~C~a~N~~G~~~~~~~l~V~~ 320 (331)
T 3u83_A 264 EYHWTTLNGSLPKG--VEA--QN--RTLFFKGPINYSLAGTYICEATNPIGTRSGQVEVNITE 320 (331)
T ss_dssp EEEEEETTBSCCTT--EEE--ET--TEEEECSCCCGGGCEEEEEEEEETTEEEEEEEEECCBC
T ss_pred EEEEEECCCccccc--cee--cC--cEEEEeCCCccccCeEEEEEEEeccccceEEEEEEEec
Confidence 9999999887643 111 12 369999 8999999999999999999998888888875
No 137
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.82 E-value=1.1e-19 Score=142.91 Aligned_cols=173 Identities=15% Similarity=0.084 Sum_probs=114.8
Q ss_pred CCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEEEE-----EcCCEE--EEEEccCCCCCCeEEEEEEEecc
Q psy14060 48 PEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEME-----HKGKIQ--ERVVDASELDDDGYYAITERKYY 120 (283)
Q Consensus 48 ~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~~-----~~~~~~--~L~i~~~~~~D~G~Y~C~a~n~~ 120 (283)
++|.+...+...+.+|+.|+|.|.+.+.+....|...+...... ...... .|.|.+++.+|+|.|+|.+.|..
T Consensus 8 ~~P~i~~~p~~~v~~G~~vtL~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 87 (218)
T 1uct_A 8 PMPFISAKSSPVIPLDGSVKIQCQAIREAYLTQLMIIKNSTYREIGRRLKFWNETDPEFVIDHMDANKAGRYQCQYRIGH 87 (218)
T ss_dssp CCCCEEESSCSEEETTCCEEEEECCCTTCSEEEEEEEETTEEEECSEECC----CCCEEEECSCCGGGCEEEEEEEEETT
T ss_pred CCCEEEecCCCccCCCCCEEEEEEcCCCCCEEEEEECCCcccccccccCCCCcceeeEEEEcccccccCEEEEEEEEcCC
Confidence 46666655555688899999999998744222343333222211 111234 89999999999999999999975
Q ss_pred ee---eeeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEc
Q psy14060 121 AL---SDLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMR 194 (283)
Q Consensus 121 ~~---~~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~ 194 (283)
+. +....+.+ ..+|.+...+ ...+.+|+.++|.|...+.|.+.+.|+|+|..+... .........|.|.
T Consensus 88 ~~~~~s~~~~l~V~~~~~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~~~----~~~~~~~~~L~I~ 162 (218)
T 1uct_A 88 YRFRYSDTLELVVTGLYGKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSLPQ----HQSGEHPANFSLG 162 (218)
T ss_dssp TEEEECCCEEEEEECSSCCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSCCS----EEECSSSEEEECC
T ss_pred CceeecCCEEEEEcCcccCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccccc----ccCCCccCEEEEc
Confidence 41 12222222 2356665444 457889999999997777788899999999876541 1123345679999
Q ss_pred CCCCCCCEEEEEEEEeCCce-----eEEEEEEEEEe
Q psy14060 195 QVFMEDSGVFAVIAENRGGK-----AKCSANLVVEE 225 (283)
Q Consensus 195 ~~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~v~~ 225 (283)
++..+|+|.|+|.|.|.... .+..+.|.|..
T Consensus 163 ~v~~~D~G~Y~C~a~n~~~~~~~s~~S~~~~l~V~g 198 (218)
T 1uct_A 163 PVDLNVSGIYRCYGWYNRSPYLWSFPSNALELVVTD 198 (218)
T ss_dssp SCCGGGCEEEEEEEECTTSTTEECCCCCCEEEEEC-
T ss_pred cCCcccCEEEEEEEEcCCCCCcCCCCCCcEEEEEec
Confidence 99999999999999986421 22335565554
No 138
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.82 E-value=7e-20 Score=142.90 Aligned_cols=164 Identities=18% Similarity=0.242 Sum_probs=115.1
Q ss_pred eeeecCcEEEEEEEccCccce-EEeecCC-----------CEEEEEcCCEE--EEEEccCCCCCCeEEEEEEEecceee-
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITATE-----------TTEMEHKGKIQ--ERVVDASELDDDGYYAITERKYYALS- 123 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~~~-----------~~~~~~~~~~~--~L~i~~~~~~D~G~Y~C~a~n~~~~~- 123 (283)
.+.+|+.+.|.|.+.|.|... .|...+. .......+... .|.|.+++.+|+|.|+|.+.|..+..
T Consensus 20 ~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~~~n~~g~~~ 99 (212)
T 2v9r_A 20 IVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVYVCVARNYLGEAV 99 (212)
T ss_dssp EECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEEEEEEEETTEEEE
T ss_pred EEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEEEEEEECCCCcee
Confidence 366788999999999877332 3322211 11111222222 34556789999999999999987743
Q ss_pred -eeeccCCCC-CCeEEecCCceeecCCCcEEEEEEE-eeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCC
Q psy14060 124 -DLSEQKPAK-PPVFTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMED 200 (283)
Q Consensus 124 -~~~~~~~~~-~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d 200 (283)
....+.+.. ++.+...+....+..|+.+.|.|.+ .+.|.+.+.|++++..+.......... + ..|.|.++..+|
T Consensus 100 ~~~~~l~V~~~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~~~~~~~~-~--~~L~i~~~~~~d 176 (212)
T 2v9r_A 100 SHDASLEVAILRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDKDERITIR-G--GKLMITYTRKSD 176 (212)
T ss_dssp CCCEEEEECEECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTTSTTEEEE-T--TEEEESSCCGGG
T ss_pred ecceEEEEEeccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCCcceEEcc-C--CeEEEeeCCHhh
Confidence 222333322 4444555666788999999999998 899999999999999887643322222 2 269999999999
Q ss_pred CEEEEEEEEeCCceeEEE-EEEEEEe
Q psy14060 201 SGVFAVIAENRGGKAKCS-ANLVVEE 225 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~~~~~-~~l~v~~ 225 (283)
.|.|+|.|.|..|...+. +.|.|..
T Consensus 177 ~G~Y~C~a~N~~g~~~s~~~~l~V~~ 202 (212)
T 2v9r_A 177 AGKYVCVGTNMVGERESEVAELTVLE 202 (212)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred CeeEEEEEecccCceecceEEEEEEe
Confidence 999999999999986654 7888874
No 139
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.82 E-value=3.4e-19 Score=138.66 Aligned_cols=158 Identities=10% Similarity=0.069 Sum_probs=112.8
Q ss_pred eeeecCcEEEEEEEccCccce-EEeec-------------------------CCCEEEEEcCCEEEEEEccCCCCCCeEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITA-------------------------TETTEMEHKGKIQERVVDASELDDDGYY 112 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~-------------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 112 (283)
.+.+|+.++|.|...+.+... .|... ..++.+. ....|.|.+++.+|+|.|
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~---~~~~L~i~~v~~~D~G~Y 86 (208)
T 3r4d_A 10 QVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY---SNGSLLFQMITMKDMGVY 86 (208)
T ss_dssp EEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEEC---TTSCEEECSCCGGGCEEE
T ss_pred eeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEe---cCCeEEEccccccCCeEE
Confidence 478899999999977766322 33322 1122222 123699999999999999
Q ss_pred EEEEEecce--eeeeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCC
Q psy14060 113 AITERKYYA--LSDLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST 187 (283)
Q Consensus 113 ~C~a~n~~~--~~~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~ 187 (283)
+|.+.+..+ ......+.+ ...|.+...... +..|+.+.|.|.+.+.| +.+.|++++..+....++.+...
T Consensus 87 ~C~~~~~~~~~~~~~~~l~V~~~~~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~~~~~~~~~~~-- 161 (208)
T 3r4d_A 87 TLDMTDENYRRTQATVRFHVHQPVTQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQLTERMTLSQN-- 161 (208)
T ss_dssp EEEEECSSCEEEEEEEEEEEECCCCCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECCCCSSEEEETT--
T ss_pred EEEEEcccCceeEEEEEEEeccCCCCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCCCCCCeEEcCC--
Confidence 999998853 222222222 233555544443 88899999999999855 89999999999887666655433
Q ss_pred EEEEEEcCCCCCCCEEEEEEEEeCCceeEEE-EEEEEE
Q psy14060 188 KSILIMRQVFMEDSGVFAVIAENRGGKAKCS-ANLVVE 224 (283)
Q Consensus 188 ~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~ 224 (283)
...|.|.++..+|.|.|+|.|.|..|...+. +.|.|.
T Consensus 162 ~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~s~~~~l~v~ 199 (208)
T 3r4d_A 162 NSILRIDPIKREDAGEYQCEISNPVSVRRSNSIKLDII 199 (208)
T ss_dssp TTEEEESSCCGGGCEEEEEEEECTTCCEECCCEEECCC
T ss_pred CCEEEEeccCHHhCeEEEEEEecCCCcccCCceeeeEE
Confidence 2579999999999999999999999886543 555554
No 140
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.82 E-value=6.5e-20 Score=147.47 Aligned_cols=187 Identities=10% Similarity=0.021 Sum_probs=110.7
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecC-CeeeecCcEEEEEEEccCcc-----ce-EEeec--------
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHG-KEIHTAKSQQVQKEKKGDKE-----IV-RKITA-------- 84 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~-~~v~~g~~v~l~C~~~g~~~-----i~-~~~~~-------- 84 (283)
-+.|.|+ |.......+.+... +.+...+. ..+.+|++++|.|.+.|.+. .. .|...
T Consensus 18 ~Y~C~a~---g~~~~~~~~~~~~~------~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~ 88 (254)
T 2c1o_A 18 KLSCKAS---GYSFTNYWMNWLRE------LVMTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKR 88 (254)
T ss_dssp -----------------------C------CCEEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEE
T ss_pred EEEEcCc---hhhhhhhhhheeec------eeEEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceE
Confidence 4667777 44444433333332 22222121 24667889999999998762 22 33321
Q ss_pred ------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee----e-eeeccCCCCCCeEEecCCceeecC
Q psy14060 85 ------------TETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL----S-DLSEQKPAKPPVFTKKIQPCRAFE 147 (283)
Q Consensus 85 ------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~----~-~~~~~~~~~~p~~~~~~~~~~~~~ 147 (283)
..++.+...+....|.|.+++.+|+|.|+|.+.|..+. . .+.......+|.+...........
T Consensus 89 ~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~ 168 (254)
T 2c1o_A 89 LIYLVSKLDSGDPDRFTGSGSGTDFTLKISRVEAEDLGIYYCVQGSHFPPTFGAGTKLELKRADAAPTVSIFPPSSEQLT 168 (254)
T ss_dssp EEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECSSSSCEEBCCEEEEECCCCBCCEEEEECCCHHHHH
T ss_pred EEEeccccCCCccceEEEecCCCEEEEEECcCCcccCEEEEEEEEcCcceEecCCEEEEECCCCCCCeeEeecCChhhcc
Confidence 24666666667889999999999999999999887542 1 122222233676665444444446
Q ss_pred CCcEEEEEEEeee-cC-CEEEEEeCCEecCCCC--CeEEEEeC-----CEEEEEEcCCCCCCCEEEEEEEEeCCcee
Q psy14060 148 QDQARFEVEFDGD-PL-PTIKWFREDFPITSSP--DFQIHTFS-----TKSILIMRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 148 g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~~~~--~~~~~~~~-----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
|+.+.|.|.+.|. |. +.++|+|++..+.... ........ ..+.|.|.++..+|.|.|+|.|.|.....
T Consensus 169 g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~~~~ 245 (254)
T 2c1o_A 169 SGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 245 (254)
T ss_dssp TTEEEEEEEEEEEBSSCCEEEEEESSSEECTTEEEEECCCCTTTCCEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CCcEEEEEEEecccCCCcEEEEEECCCcccCcceeccccccCCCCcEEEEEEEEeccccccCCCeEEEEEEcCCCCC
Confidence 7899999999885 44 4699999998876540 00000000 13579999999999999999999987553
No 141
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.82 E-value=1.2e-19 Score=140.73 Aligned_cols=161 Identities=12% Similarity=0.022 Sum_probs=111.2
Q ss_pred eeeecCcEEEEEEEccCcc-----ce-EEee-------cCCCEEEEEc---CCEEEEEEccCCCCCCeEEEEEEEeccee
Q psy14060 59 EIHTAKSQQVQKEKKGDKE-----IV-RKIT-------ATETTEMEHK---GKIQERVVDASELDDDGYYAITERKYYAL 122 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~-----i~-~~~~-------~~~~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~ 122 (283)
.+.+|+++.|.|.+.+.+. .. .|.. ...++.+... .+...|.|.+++.+|+|.|+|.+.|..+.
T Consensus 13 ~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~ 92 (202)
T 3bp6_B 13 TVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVICGAAW 92 (202)
T ss_dssp EEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEEETTEE
T ss_pred EEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEEeCCCc
Confidence 3667889999999998863 22 3333 2234444322 14689999999999999999999998773
Q ss_pred -eeeeccCCCCC---CeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCC
Q psy14060 123 -SDLSEQKPAKP---PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFM 198 (283)
Q Consensus 123 -~~~~~~~~~~~---p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 198 (283)
.....+.+..+ |.+.. ..+..|+.+.|.|.+.|+|.|.+.|++++..+.. .......+....+.+..+..
T Consensus 93 ~~~~~~l~V~~~~~~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~~~--~~~~~~~~~~~~~~i~~v~~ 166 (202)
T 3bp6_B 93 DYKYLTVKVKASYMRIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPANT--SHIRTPEGLYQVTSVLRLKP 166 (202)
T ss_dssp EEEEEEEEEEBCCCCEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCCEE--EEEECTTSCEEEEEEEEECC
T ss_pred ceEEEEEEecCCCCcccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCccC--ceeeCCCCCEEEEEEEEEEc
Confidence 22333333222 22211 2456799999999999999999999998765421 11111122334567778888
Q ss_pred CCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 199 EDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+|.|.|+|.|.|..|.....+.|.|.+
T Consensus 167 ~d~G~Y~C~a~N~~g~~~~~~~l~v~~ 193 (202)
T 3bp6_B 167 QPSRNFSCMFWNAHMKELTSAIIDPLS 193 (202)
T ss_dssp CTTCCEEEEEEETTTTEEEEEEECC--
T ss_pred CCCCEEEEEEEcCCcccccEEEEEecC
Confidence 999999999999999988888877764
No 142
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.82 E-value=1.3e-20 Score=147.10 Aligned_cols=162 Identities=15% Similarity=0.092 Sum_probs=114.5
Q ss_pred eeeecCcEEEEEEEccCccc----e-EEeec---------------------------CCCEEEEE---cCCEEEEEEcc
Q psy14060 59 EIHTAKSQQVQKEKKGDKEI----V-RKITA---------------------------TETTEMEH---KGKIQERVVDA 103 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i----~-~~~~~---------------------------~~~~~~~~---~~~~~~L~i~~ 103 (283)
.+.+|+.+.|.|.+.+.+.. . .|... ..++.+.. .....+|.|.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~ 90 (214)
T 3jz7_A 11 EKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASINVTN 90 (214)
T ss_dssp EEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCEEECS
T ss_pred EEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccEEEcc
Confidence 36778899999999987621 2 33221 22222211 11356799999
Q ss_pred CCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEE-eeecCCEEEEEeCCE--ecCCCCC
Q psy14060 104 SELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFREDF--PITSSPD 179 (283)
Q Consensus 104 ~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~~~W~k~~~--~~~~~~~ 179 (283)
++.+|+|.|+|.+.|..+. .....+.+..+|.+........+..|+.+.|.|.+ .+.|.+.+.|++++. .+.....
T Consensus 91 v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~~~~~ 170 (214)
T 3jz7_A 91 LQLSDIGTYQCKVKKAPGVANKKFLLTVLVKPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMPTPWL 170 (214)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEECCCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCCGGGG
T ss_pred CChhhCeEEEEEEEeCCCccccEEEEEEEcCCCCceeeeecceecCCcEEEEecCCCCCCCCEEEEEECCCCCccCccce
Confidence 9999999999999998773 33344555556655444444457889999999999 888999999999543 3321111
Q ss_pred eEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 180 FQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 180 ~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
. ......|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 171 ~----~~~~~~L~i~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~V~ 211 (214)
T 3jz7_A 171 A----EMTSPVISVKNASSEYSGTYSCTVQNRVGSDQCMLRLDVV 211 (214)
T ss_dssp G----GTTSSEEEECSCCGGGCEEEEEEEECSSCEEEEEEEECCB
T ss_pred e----ccCCCEEEEecCCHHHCEEEEEEEEcCCCcEEEEEEEEEe
Confidence 0 0122379999999999999999999999999888888776
No 143
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.82 E-value=1.3e-18 Score=152.56 Aligned_cols=210 Identities=10% Similarity=0.097 Sum_probs=127.0
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|+.++|.|.+.+.+ .+ .|.. ...|+.+... +....|.|.+++.+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 90 (475)
T 1iga_A 12 VKKPGASVKVSCKASGYSFTSYGL-HWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSSLRPE 90 (475)
T ss_pred EEeCCCCEEEEEEecCCCCCCceE-EEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECCCChh
Confidence 367788999999998753 22 2221 1234444332 34678999999999
Q ss_pred CCeEEEEEEEecce-------eeeeeccCCC----CCCeEEecCCceeecCCCcEEEEEEEeee-cC-C-EEEEEeCCEe
Q psy14060 108 DDGYYAITERKYYA-------LSDLSEQKPA----KPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-P-TIKWFREDFP 173 (283)
Q Consensus 108 D~G~Y~C~a~n~~~-------~~~~~~~~~~----~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~-~~~W~k~~~~ 173 (283)
|+|.|.|.+.+..+ ......+.+. .+|.+.... ...+..|+.+.|.|.+.|. |. + .+.|++++..
T Consensus 91 D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~-~~~~~~g~~v~L~C~~~g~~P~~p~~v~W~~~~~~ 169 (475)
T 1iga_A 91 DTAVYYCARDPYGGGKSEFDYWGQGTLVTVSSASPTSPKVFPLS-LCSTQPDGNVVIACLVQGFFPQEPLSVTWSESGQG 169 (475)
T ss_pred hCEEEEEEEeccCCCccceeeecCceEEEeccCCCcCCeEEecC-ccccCCCCeEEEEEEEeeecCCCceEEEEcCCCcc
Confidence 99999999988753 1111222222 245444332 2233689999999999987 65 5 9999998753
Q ss_pred cCCCCCeEEE--EeCC---EEEEEEcCCCCCCCEEEEEEEEeCCcee-EEEEEEEEEeccCC-------C-CCCCCCCeE
Q psy14060 174 ITSSPDFQIH--TFST---KSILIMRQVFMEDSGVFAVIAENRGGKA-KCSANLVVEEKRQG-------G-RGGVVPPSF 239 (283)
Q Consensus 174 ~~~~~~~~~~--~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~~-------~-~~~~~~p~~ 239 (283)
.......... ..+. .+.|.|..+...|.|.|+|.+.|..+.. ...+.+.|...... . .....+|.+
T Consensus 170 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~~~~v~l~V~~~~~~~~~~~~~~~~~~~~~p~v 249 (475)
T 1iga_A 170 VTARNFPPSQDASGDLYTTSSQLTLPATQCLAGKSVTCHVKHYTNPSQDVTVPCPVPSTPPTPSPSTPPTPSPSCCHPRL 249 (475)
T ss_pred cceEeCCceecCCCCcEEEEEEEEechhHcCCCceEEEEEEECCCCceeeeEecccccCcccccccccccCCCCCCCcEE
Confidence 2110000000 1111 2358888888899999999999988642 22223222110000 0 000024444
Q ss_pred -EecCCceEEcCCCeEEEEEEEEeeCC---CeeEE
Q psy14060 240 -LTTISSAVINVGQLARFDAKISATKP---LDVYW 270 (283)
Q Consensus 240 -~~~~~~~~v~~g~~v~L~C~~~g~p~---~~v~W 270 (283)
...+....+.+|+.+.|.|.+.|.++ +.|.|
T Consensus 250 ~~~~p~~~~~~~G~~v~L~C~~~g~~p~~~~~i~W 284 (475)
T 1iga_A 250 SLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW 284 (475)
T ss_pred EEcCCChHHhccCCceEEEEEEEcccCCCceEEEE
Confidence 33333344689999999999998754 58999
No 144
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.82 E-value=4.2e-19 Score=141.78 Aligned_cols=173 Identities=10% Similarity=0.017 Sum_probs=117.8
Q ss_pred CCCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEEEE-----EcCCEEEEEEccCCCCCCeEEEEEEEecce
Q psy14060 47 VPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEME-----HKGKIQERVVDASELDDDGYYAITERKYYA 121 (283)
Q Consensus 47 ~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~~-----~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~ 121 (283)
.++|.+...+...+.+|+.|+|.|.+.+.+....+...+...... .......|.|.+++.+|+|.|+|.+.|..+
T Consensus 5 ~~kP~i~~~P~~~v~~G~~VtL~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~~ 84 (242)
T 1p6f_A 5 LPKPFIWAEPHFMVPKEKQVTICCQGNYGAVEYQLHFEGSLFAVDRPKPPERINKVKFYIPDMNSRMAGQYSCIYRVGEL 84 (242)
T ss_dssp CCCCEEEEESCSEEETTCCEEEEEECCTTCCEEEEEETTEEEEEECCSSCTTCCEEEEEECSCCGGGCEEEEEEEEETTE
T ss_pred CCCCEEEeeCCCccCCCCcEEEEEeeCCCCcEEEEEECCCccccccccccCCcceeEEEecCCCcccCeEEEEEEecCCc
Confidence 346777766655688899999999997655322333322221111 123567899999999999999999987644
Q ss_pred e---eeeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcC
Q psy14060 122 L---SDLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQ 195 (283)
Q Consensus 122 ~---~~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~ 195 (283)
. +....+.+ ..+|.+...+ ...+.+|+.++|.|.+.+ +.+.+.|+|++..+.. ..........|.|.+
T Consensus 85 ~s~~S~~~~L~V~~~~~~P~i~~~p-~~~v~~G~~vtL~C~~~~-~~~~~~w~k~g~~~~~----~~~~~~~~~~l~I~~ 158 (242)
T 1p6f_A 85 WSEPSNLLDLVVTEMYDTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSHV----QRGYGKVQAEFPLGP 158 (242)
T ss_dssp ECCCCCCEEEEEECCSCCCEEEEES-CSEEETTCEEEEEEECTT-SCSEEEEEECSSSCEE----EEEECSSEEEEEEEE
T ss_pred cccCCcceEEEeecccCCCceEccC-CCccCCCCcEEEEEecCC-CCCEEEEEECCCccCc----cccCCCceEEEEeCC
Confidence 2 12222222 2356666544 356889999999999876 4569999999876542 122334567899999
Q ss_pred CCCCCCEEEEEEEEeCC--c-eeEEEEEEEEEe
Q psy14060 196 VFMEDSGVFAVIAENRG--G-KAKCSANLVVEE 225 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~--g-~~~~~~~l~v~~ 225 (283)
++.+|+|.|+|.+.|.. . ..+..+.|.|.+
T Consensus 159 v~~~d~G~Y~C~a~n~~~~~s~~S~~~~l~V~~ 191 (242)
T 1p6f_A 159 VTTAHRGTYRCFGSYNNHAWSFPSEPVKLLVTG 191 (242)
T ss_dssp CCGGGCEEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred CccccCEEEEEEEECCCCcccCCCCCEEEEEec
Confidence 99999999999999864 1 233446777775
No 145
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.82 E-value=9.9e-19 Score=140.89 Aligned_cols=166 Identities=12% Similarity=0.098 Sum_probs=118.2
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|++++|.|.+.|.+ .+. |.. ...++.+... +...+|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~g~~~~~~~v~-W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (256)
T 1nqb_A 11 LVKPGASVKLSCKASGYTFTSYWMH-WVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSSLTSE 89 (256)
T ss_dssp EECTTCCEEEEEEECSSCGGGSCEE-EEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eecCCCcEEEEEEeccccCCCceEE-EEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECcCChh
Confidence 366788999999998864 232 211 1245655542 45789999999999
Q ss_pred CCeEEEEEEEeccee------eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCC-----EEEEEe--CCEec
Q psy14060 108 DDGYYAITERKYYAL------SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP-----TIKWFR--EDFPI 174 (283)
Q Consensus 108 D~G~Y~C~a~n~~~~------~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-----~~~W~k--~~~~~ 174 (283)
|+|.|+|.+.|..+. .....+.+..+|.+...+....+.+|++++|.|.+.+.|.+ .+.|+| ++..+
T Consensus 90 DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~ 169 (256)
T 1nqb_A 90 DSAVYYCARYDYYGSSYFDYWGQGTTVTVSSDIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSP 169 (256)
T ss_dssp GCEEEEEEECCTTSSSSCSEECCCEEEEECCCCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCE
T ss_pred hCEEEEEEEeeccCccceeEEcCceeeeecccccEEecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCc
Confidence 999999999987441 12233445556667667777889999999999999987765 899999 55432
Q ss_pred C------------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCcee-EEEEEEEEEe
Q psy14060 175 T------------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA-KCSANLVVEE 225 (283)
Q Consensus 175 ~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 225 (283)
. ...++.........+|.|.++..+|+|.|+|.+.|..... .....|.|..
T Consensus 170 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 233 (256)
T 1nqb_A 170 KLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGVYYCFQGSHVPYTFGGGTKLEIKR 233 (256)
T ss_dssp EEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEEeCCCCCccCCcEEEEccCCEEEEEECCCChHHCEEEEEEEccCCceEECCCEEEEEEC
Confidence 1 1245665555667789999999999999999998854322 1224555553
No 146
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.82 E-value=5.8e-19 Score=142.32 Aligned_cols=153 Identities=12% Similarity=0.077 Sum_probs=108.9
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee------------------------cCCCEEEEEc--CCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT------------------------ATETTEMEHK--GKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~------------------------~~~~~~~~~~--~~~~~L~i~~~~~~D 108 (283)
.+.+|+.|+|.|.+.|.| .+. |.. ...++.+... +...+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~g~p~~~~~v~-W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (257)
T 1f3r_B 11 LVRPSETLSLTCTVSGFSLTSFSVS-WVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQTDD 89 (257)
T ss_dssp EECTTSEEEEEEEEESSCTTTSCCE-EEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCTTC
T ss_pred cccCCceEEEEEEEecccCCCccEE-EEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCccc
Confidence 477788999999999873 332 211 1345665542 567899999999999
Q ss_pred CeEEEEEEEecce----------eeeeeccCCCCC---------------CeEEecCCceeecCCCcEEEEEEEeeecCC
Q psy14060 109 DGYYAITERKYYA----------LSDLSEQKPAKP---------------PVFTKKIQPCRAFEQDQARFEVEFDGDPLP 163 (283)
Q Consensus 109 ~G~Y~C~a~n~~~----------~~~~~~~~~~~~---------------p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~ 163 (283)
+|.|.|.+.|..+ ......+.+..+ +.+...+....+.+|++++|.|.+.+.|.+
T Consensus 90 sG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~ 169 (257)
T 1f3r_B 90 TGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQNINN 169 (257)
T ss_dssp CEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSCCBT
T ss_pred CEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCcCCC
Confidence 9999999998732 111112222222 223344556678899999999999998888
Q ss_pred EEEEEe--CCEecC------------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCC
Q psy14060 164 TIKWFR--EDFPIT------------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 164 ~~~W~k--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
.+.|+| ++..+. ...++.+........|.|.++..+|+|.|+|.+.|..
T Consensus 170 ~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 232 (257)
T 1f3r_B 170 YLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSGSGTDYTLTISSLQPEDVATYFCYQYNNG 232 (257)
T ss_dssp CEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEEBTEEEEEECSCCGGGCSEEEEEEESSS
T ss_pred cEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEecCCCEEEEEECCCChhhCEEEEEEEeCCC
Confidence 999999 554321 1245655555566789999999999999999999975
No 147
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.81 E-value=7.9e-20 Score=138.80 Aligned_cols=164 Identities=9% Similarity=0.014 Sum_probs=113.9
Q ss_pred CCCceeeecCC-eeeecCcEEEEEEEccCcc-c-eEEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeee
Q psy14060 48 PEPSASGVHGK-EIHTAKSQQVQKEKKGDKE-I-VRKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSD 124 (283)
Q Consensus 48 ~~p~~~~~~~~-~v~~g~~v~l~C~~~g~~~-i-~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~ 124 (283)
++|.+...+.. .+.+|+.+.|.|.+.+.+. . ..|...+... ......|.|.+++.+|+|.|+|.+.|..+..
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~----~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~s~- 77 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLS----EETNSSLNIVNAKFEDSGEYKCQHQQVNESE- 77 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEEC----SCCSSEEEECSCCGGGCEEEEEECTTSSCCC-
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeEC----CCCceEEEEeccceecCEEEEEEcCCccccc-
Confidence 35555554444 5888999999999998874 2 2454433221 1235689999999999999999998865432
Q ss_pred eeccCCCCCCeEEecCCceeecCCCcEEEEEEEe-eecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEE
Q psy14060 125 LSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFD-GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGV 203 (283)
Q Consensus 125 ~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 203 (283)
...+.+..++... ......+..|+.+.|.|.+. +.|.+.+.|++++..+.... ....|.|.++..+|+|.
T Consensus 78 ~~~l~V~~~~~~~-~~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~~~--------~~~~L~i~~v~~~d~G~ 148 (176)
T 1f2q_A 78 PVYLEVFSDWLLL-QASAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKYWY--------ENHNISITNATVEDSGT 148 (176)
T ss_dssp CEEEEEECSSEEE-EESCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCSCC--------CSSEEEESSCCGGGCEE
T ss_pred cEEEEEeCcceee-cCCcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEeeec--------CCCeEEECCCCcccCEE
Confidence 2223333344333 33446788999999999995 55667999999999875321 23469999999999999
Q ss_pred EEEEEEeCCce-eEEEEEEEEEe
Q psy14060 204 FAVIAENRGGK-AKCSANLVVEE 225 (283)
Q Consensus 204 Y~C~a~n~~g~-~~~~~~l~v~~ 225 (283)
|+|.+.|..+. .+..+.|.|..
T Consensus 149 Y~C~a~n~~~~~~s~~~~l~V~~ 171 (176)
T 1f2q_A 149 YYCTGKVWQLDYESEPLNITVIK 171 (176)
T ss_dssp EEEEEEETTEEEECCCEEEEEEC
T ss_pred EEEEEEeCCcceEecCEEEEEec
Confidence 99999997554 33446777774
No 148
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.81 E-value=1.2e-19 Score=141.97 Aligned_cols=158 Identities=10% Similarity=0.077 Sum_probs=110.5
Q ss_pred eeeecCcEEEEEEEccCccce-EEeec--------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITA--------------------TETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~--------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|+.+.|.|.+.|.|... .|... ..++.+...+....|.|.+++.+|+|.|+|.+.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (213)
T 3d9a_L 12 SVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQS 91 (213)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhCEEEEEeee
Confidence 366788999999999987222 33211 146666666678899999999999999999999
Q ss_pred ecceee-----eeeccCCCCCCeEEecCCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCCCCe--EEEEeC--
Q psy14060 118 KYYALS-----DLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSSPDF--QIHTFS-- 186 (283)
Q Consensus 118 n~~~~~-----~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~~~~--~~~~~~-- 186 (283)
|..+.. .+.......+|.+...........|+.+.|.|.+.| .|.+ .+.|++++..+...... ......
T Consensus 92 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 171 (213)
T 3d9a_L 92 NSWPYTFGGGTKLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDS 171 (213)
T ss_dssp SSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEEEECCCCTTTC
T ss_pred cCCcceeCCCEEEEEecCCCCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCcceeeecCCCccCCCC
Confidence 886521 122222223676665444444457889999999988 5555 89999999987654110 000000
Q ss_pred ---CEEEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 187 ---TKSILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 187 ---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
..+.|.|.++..+|.|.|+|.|.|......
T Consensus 172 ~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~~ 204 (213)
T 3d9a_L 172 TYSMSSTLTLTKDEYERHNSYTCEATHKTSTSP 204 (213)
T ss_dssp CEEEEEEEEEEHHHHHHCCEEEEEEECTTCSSC
T ss_pred CEEEEEEEEEeccccCCCCEEEEEEEEccCCCc
Confidence 124799999999999999999999876543
No 149
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.81 E-value=2.2e-19 Score=141.82 Aligned_cols=165 Identities=7% Similarity=0.004 Sum_probs=104.2
Q ss_pred eeecCcEEEEEEEccCccc---e-EEeecCC-----------------------CEEEEE---cCCEEEEEEccCCCCCC
Q psy14060 60 IHTAKSQQVQKEKKGDKEI---V-RKITATE-----------------------TTEMEH---KGKIQERVVDASELDDD 109 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i---~-~~~~~~~-----------------------~~~~~~---~~~~~~L~i~~~~~~D~ 109 (283)
+.+|++++|.|.+.+.+.. . .|...+. +..... ..+..+|.|.+++.+|+
T Consensus 16 v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~ 95 (226)
T 4f80_A 16 AMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVTASDS 95 (226)
T ss_dssp EETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCCGGGC
T ss_pred EEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCchHHC
Confidence 5678999999999876521 1 3433221 122111 12467899999999999
Q ss_pred eEEEEEEEecceeeeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEee-ecCCEEEEEeCCEecCCCCCeEEEEe--C
Q psy14060 110 GYYAITERKYYALSDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLPTIKWFREDFPITSSPDFQIHTF--S 186 (283)
Q Consensus 110 G~Y~C~a~n~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~~~W~k~~~~~~~~~~~~~~~~--~ 186 (283)
|.|+|.+.|..+..... +.+..++.+........+..|+.+.|.|.+.| .|.|.++|++++..+.......+... +
T Consensus 96 G~Y~C~a~n~~~~~~~~-v~~~~~~~~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~~~~~~~~~~~~~~~~~g 174 (226)
T 4f80_A 96 GKYLCYFQDGDFYEKAL-VELKVAALGSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNKGENIPTVEAPVVADGVG 174 (226)
T ss_dssp EEEEEEEEETTEEEEEE-EEEEEEBCCCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTTSCBCCCEECCCEECTTS
T ss_pred eeEEEEEECCCcEEEEE-EEEeeccceecccceeeeccCCceeeEEEeccCCCCCEEEEEECCceEcCCCceEEEECCCC
Confidence 99999999987743321 22211222222233456778999999999988 48999999997654433221111111 2
Q ss_pred CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 187 TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 187 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
....+.+..+..+|.|.|+|.|.|..|.....+.|.|.+
T Consensus 175 ~~~v~s~l~v~~~d~G~YtC~a~N~~g~~~~~~~v~v~e 213 (226)
T 4f80_A 175 LYAVAASVIMRGSSGEGVSCTIRSSLLGLEKTASISIAD 213 (226)
T ss_dssp CEEEEEEEEECC----CEEEEEEETTTTEEEEEEECCCT
T ss_pred cEEEEEEEEechhcCcEEEEEEEeCCCCeEEEEEEEECC
Confidence 223344445678999999999999999988888887753
No 150
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.81 E-value=1.8e-20 Score=145.83 Aligned_cols=156 Identities=15% Similarity=0.150 Sum_probs=113.2
Q ss_pred eeeecCcEEEEEEEccCccce-EEeecC------------------CCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEec
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITAT------------------ETTEMEHKGKIQERVVDASELDDDGYYAITERKY 119 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~~------------------~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 119 (283)
.+.+|+.+.|.|.+.|.|... .|.... .++... . ..|.|.+++.+|+|.|+|.+.|.
T Consensus 15 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~---~-~~L~i~~~~~~d~G~Y~C~~~~~ 90 (209)
T 1nbq_A 15 RIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL---P-TGITFKSVTREDTGTYTCMVSEE 90 (209)
T ss_dssp CEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE---T-TEEECSCCCTTSCSEEEEEEEET
T ss_pred EEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee---c-cEEEEeeCCHHHCcEEEEEEecC
Confidence 367788999999999877322 332221 233322 1 67999999999999999999987
Q ss_pred ce---eeeeeccCCCCCCeEEecCCceeecCCCcEEEEEEE-eeecCCEEEEEeCCEecCCCCCe-------EEEEeCCE
Q psy14060 120 YA---LSDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFREDFPITSSPDF-------QIHTFSTK 188 (283)
Q Consensus 120 ~~---~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~~~W~k~~~~~~~~~~~-------~~~~~~~~ 188 (283)
.+ ......+.+..+|.+........+..|+.+.|.|.+ .+.|.+.+.|++++..+...... ........
T Consensus 91 ~g~~~~~~~~~l~V~~~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (209)
T 1nbq_A 91 GGNSYGEVKVKLIVLVPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVLNPTT 170 (209)
T ss_dssp TSSCEECCEEECCEEBCCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCCCSCSSSSSSCTTCCCCCCTTT
T ss_pred CCCccceEEEEEEEecCCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeCCCccccceeeeccceEEcCCc
Confidence 54 233445555566666555555678899999999997 88999999999999887653221 01111233
Q ss_pred EEEEEcCCCCCCCEEEEEEEEeCCceeEEE
Q psy14060 189 SILIMRQVFMEDSGVFAVIAENRGGKAKCS 218 (283)
Q Consensus 189 ~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 218 (283)
..|.|.++..+|.|.|+|.|.|..|....+
T Consensus 171 ~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~s 200 (209)
T 1nbq_A 171 GELVFDPLSASDTGEYSCEARNGYGTPMTS 200 (209)
T ss_dssp CCEEESSCCGGGCCCEEEEEECSSSCCEEC
T ss_pred ceEEEEeccccCCeEEEEEEeCCcCccccc
Confidence 469999999999999999999999987443
No 151
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.81 E-value=3.2e-19 Score=140.27 Aligned_cols=166 Identities=10% Similarity=0.040 Sum_probs=106.5
Q ss_pred eeecCcEEEEEEEccCccc-----e-EEeec---------------------CCCEEEEE---cCCEEEEEEccCCCCCC
Q psy14060 60 IHTAKSQQVQKEKKGDKEI-----V-RKITA---------------------TETTEMEH---KGKIQERVVDASELDDD 109 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i-----~-~~~~~---------------------~~~~~~~~---~~~~~~L~i~~~~~~D~ 109 (283)
+.+|+++.|.|.+.|.|.. . .|... ..+..+.. ..+..+|.|.+++.+|+
T Consensus 13 ~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~ 92 (222)
T 3sbw_C 13 VEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDVKLQDA 92 (222)
T ss_dssp EETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSCCGGGC
T ss_pred EEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCcccccC
Confidence 6678899999999876621 1 44332 13333321 12467899999999999
Q ss_pred eEEEEEEEecceeeeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeC-CEecCCCCCeEE--EEeC
Q psy14060 110 GYYAITERKYYALSDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRE-DFPITSSPDFQI--HTFS 186 (283)
Q Consensus 110 G~Y~C~a~n~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~-~~~~~~~~~~~~--~~~~ 186 (283)
|.|+|.+.|.........+.+..++..........+..|+.+.|.|.+.|.|.|.+.|+++ +..+........ ...+
T Consensus 93 G~Y~C~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~~~~~~~~~~~~~~~~~ 172 (222)
T 3sbw_C 93 GVYRCMISYGGADYKRITVKVNAPYNKINQRILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQVLSGKTTTTNSKREEK 172 (222)
T ss_dssp EEEEEEEESSSEEEEEEEEEEEBCCCCCEEEEEEEETTTTEEEEEEEEEEBSCCEEEEEETTCCEECCEEEEEECC----
T ss_pred eEEEEEEEeCCCceeEEEEEEECCCCCCCceeeeeecCCCcEEEEEEecCCCCCeEEEEECCCceecCccceEEEcCCCC
Confidence 9999999983323333333333333222111112567899999999999999999999998 555443221111 1111
Q ss_pred CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 187 TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 187 ~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
......+..+..+|.|.|+|.|.|..|.....+.|.|.+
T Consensus 173 ~~~~~~~l~v~~~d~g~Y~C~a~n~~g~~~~~~~l~v~~ 211 (222)
T 3sbw_C 173 LFNVTSTLRINTTTNEIFYCTFRRLDPEENHTAELVIPE 211 (222)
T ss_dssp CEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred CEEEEEEEEEeccCCcEEEEEEEeCccceeeEEEEEecC
Confidence 111222223456899999999999999998888888764
No 152
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.81 E-value=1.9e-19 Score=142.20 Aligned_cols=168 Identities=15% Similarity=0.197 Sum_probs=117.9
Q ss_pred eeeecCcEEEEEEEccCccce-EEeecC------CCEE-EEEcCCEEEEEEccCCCCCCeEEEEEEEecceee-eeeccC
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITAT------ETTE-MEHKGKIQERVVDASELDDDGYYAITERKYYALS-DLSEQK 129 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~~------~~~~-~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~~ 129 (283)
.+.+|+.+.|.|.+.|.|... .|...+ .++. .........|.|.+++.+|+|.|+|.+.|..+.. ....+.
T Consensus 30 ~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~ 109 (231)
T 3ojm_B 30 AVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTYHLD 109 (231)
T ss_dssp EEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEE
T ss_pred EEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEEEecccCcccccEEEE
Confidence 377789999999999887332 333221 1110 0111233479999999999999999999987732 222222
Q ss_pred C----CCCCeEEe-cCCceeecCCCcEEEEEEEeeecCCEEEEEe----CCEecCCCCC--eEEEEeC-----CEEEEEE
Q psy14060 130 P----AKPPVFTK-KIQPCRAFEQDQARFEVEFDGDPLPTIKWFR----EDFPITSSPD--FQIHTFS-----TKSILIM 193 (283)
Q Consensus 130 ~----~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k----~~~~~~~~~~--~~~~~~~-----~~~~l~i 193 (283)
+ ..+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ ++..+..... ....... ....|.|
T Consensus 110 V~~~~~~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~L~i 189 (231)
T 3ojm_B 110 VVERSRHRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKHSGINSSNAEVLAL 189 (231)
T ss_dssp EECCCCCCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTTSCBCEEEEEECSTTCSCTTEEEE
T ss_pred EEcCCCCCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCCCcceEeEecccccccCCccEEEE
Confidence 2 12333332 2456788899999999999999999999999 7776654322 2222111 1246999
Q ss_pred cCCCCCCCEEEEEEEEeCCceeEEEEEEEEEec
Q psy14060 194 RQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 226 (283)
Q Consensus 194 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~ 226 (283)
.++..+|.|.|+|.|.|..|.....+.|.|...
T Consensus 190 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 222 (231)
T 3ojm_B 190 FNVTEADAGEYICKVSNYIGQANQSAWLTVLPK 222 (231)
T ss_dssp CSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred ecCCHHHCeEEEEEEEeccceEeeEEEEEEecC
Confidence 999999999999999999999988899998863
No 153
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.81 E-value=3.5e-19 Score=136.10 Aligned_cols=149 Identities=11% Similarity=0.080 Sum_probs=110.4
Q ss_pred eeecCcEEEEEEEccCccce-EEeecCCC--------------------EEEEE---cCCEEEEEEccCCCCCCeEEEEE
Q psy14060 60 IHTAKSQQVQKEKKGDKEIV-RKITATET--------------------TEMEH---KGKIQERVVDASELDDDGYYAIT 115 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i~-~~~~~~~~--------------------~~~~~---~~~~~~L~i~~~~~~D~G~Y~C~ 115 (283)
+.+|+.+.|.|.+.+.+... .|...... +.... ..+...|.|.+++.+|+|.|+|.
T Consensus 7 ~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~ 86 (184)
T 2ny1_B 7 GKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTYICE 86 (184)
T ss_dssp EETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEEEEE
T ss_pred EeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEEEEE
Confidence 66788999999998877322 44433221 22111 22356699999999999999999
Q ss_pred EEecceeeeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcC
Q psy14060 116 ERKYYALSDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQ 195 (283)
Q Consensus 116 a~n~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~ 195 (283)
+.|..+...+. +. .+. .+....+..|+.+.|.|.+.+.|.+.+.|++++..+.. ....|.|.+
T Consensus 87 ~~~~~~~~~l~---V~---~~~-~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~~~----------~~~~L~i~~ 149 (184)
T 2ny1_B 87 VEDQKEEVQLL---VF---GLT-ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKNIQ----------GGKTLSVSQ 149 (184)
T ss_dssp ETTEEEEEEEE---EE---EEE-ESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCEEE----------ESSEEEESS
T ss_pred EEcCCCcEEEE---EE---Eec-CCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcccc----------CceEEEEec
Confidence 98886633222 11 111 23445788999999999998889999999998765411 223699999
Q ss_pred CCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 196 VFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+..+|+|.|+|.|.|..+.....+.|.|..
T Consensus 150 v~~~d~G~Y~C~a~n~~~~~~~~~~l~V~~ 179 (184)
T 2ny1_B 150 LELQDSGTWTCTVLQNQKKVEFKIDIVVLA 179 (184)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CCcCCCeEEEEEEEECCceEEEEEEEEEEe
Confidence 999999999999999999998889998886
No 154
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.81 E-value=6.4e-19 Score=141.85 Aligned_cols=212 Identities=10% Similarity=0.001 Sum_probs=111.3
Q ss_pred CCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEE-EE------EcCCEEEEEEccCCCCCCeEEEEEEEecc
Q psy14060 48 PEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTE-ME------HKGKIQERVVDASELDDDGYYAITERKYY 120 (283)
Q Consensus 48 ~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~-~~------~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 120 (283)
++|.+...+...+.+|+.|+|.|.+.+......|...+.... .. .......|.|.+++.+|+|.|+|.+.+..
T Consensus 6 ~kP~i~~~P~~~V~~G~~VtL~C~~~~~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~ 85 (257)
T 1b6u_A 6 RKPSLLAHPGPLVKSEETVILQCWSDVRFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSVTH 85 (257)
T ss_dssp CCCEECCBSCSEEESSCCEEEEEEESSCCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEECSS
T ss_pred CCCEEEEcCCCEecCCCCEEEEEecCCCCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEeccC
Confidence 355555555556888999999999976542223433332211 00 11246789999999999999999997642
Q ss_pred e------eeeeeccC---CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEE-EeCCEEE
Q psy14060 121 A------LSDLSEQK---PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIH-TFSTKSI 190 (283)
Q Consensus 121 ~------~~~~~~~~---~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~-~~~~~~~ 190 (283)
. .+....+. ...+|.+...+. ..+.+|++++|.|.+.+. .+.+.|+|++..+......... .......
T Consensus 86 ~~~~~s~~S~~~~L~V~~~~~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~ 163 (257)
T 1b6u_A 86 SPYQLSAPSDPLDIVITGLYEKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHERRFSAGPKVNGTFQAD 163 (257)
T ss_dssp CTTSCCCCCCCEEEEEECSSCCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCEECCBCBCCSSSCCBEE
T ss_pred CCccccccCCCEEEecccCCCCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccCcccccccccCCceeEE
Confidence 1 11111222 234566655544 467899999999999874 5799999998765432111000 0112467
Q ss_pred EEEcCCCCCCCEEEEEEEEeCCc-----eeEEEEEEEEEeccCCCCCCCCCCeEEec-CCceEEcCCCeEEEEEEEEeeC
Q psy14060 191 LIMRQVFMEDSGVFAVIAENRGG-----KAKCSANLVVEEKRQGGRGGVVPPSFLTT-ISSAVINVGQLARFDAKISATK 264 (283)
Q Consensus 191 l~i~~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~~~~~~~~~~~~p~~~~~-~~~~~v~~g~~v~L~C~~~g~p 264 (283)
|.|.+++ |+|.|+|.+.+... ..+..+.|.|.. +|.+..+ +.......|..+.|.|.+ |.+
T Consensus 164 l~I~~v~--D~G~Y~C~a~~~~~p~~~s~~S~pl~L~V~g----------~p~~~~p~~~~~~~~~g~~~~l~~~~-~~~ 230 (257)
T 1b6u_A 164 FPLGPAT--HGGTYRCFGSFRDSPYEWSNSSDPLLVSVTG----------NPSNSWPSPTEPSSETGNPRHLHAAA-EQK 230 (257)
T ss_dssp EEEEECC--SCEEEEEEEECSSCTTBBCCCCCCEEECCBC----------CC----------------------------
T ss_pred EEecccc--cCEEEEEEEEcCCCCcccccCCCCEEEEEec----------cCCCCCCCCcccCccCCCeEEEEEEE-cch
Confidence 9999998 99999999997532 122335666664 3444321 112245679999999855 446
Q ss_pred CCeeEEeeCC
Q psy14060 265 PLDVYWLKVS 274 (283)
Q Consensus 265 ~~~v~W~~~g 274 (283)
...+.|...+
T Consensus 231 ~~~~~~~~~~ 240 (257)
T 1b6u_A 231 LISEEDLNLD 240 (257)
T ss_dssp ----------
T ss_pred HHHHHHhhhh
Confidence 6778887643
No 155
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.80 E-value=3e-18 Score=141.21 Aligned_cols=144 Identities=24% Similarity=0.353 Sum_probs=116.1
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCC-CCeEEEE-eCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS-PDFQIHT-FSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~-~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
.+|.|...+....+..|+.+.|.|.+.|.|.+.+.|++++..+... .++.+.. .+..+.|.|.++..+|+|.|+|.+.
T Consensus 3 ~~P~~~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~a~ 82 (305)
T 2nzi_A 3 MAPHFKEELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQGKEIIADGLKYRIQEFKGGYHQLIIASVTDDDATVYQVRAT 82 (305)
T ss_dssp CCCEEEECCCCEEECTTCCEEEEEEEECSSCCEEEEEETTEECCCCSSSEEEEEETTTEEEEEESSCCGGGCSEEEEEEE
T ss_pred CCCeeeecccceEEeCCCcEEEEEEEeCCCCCeEEEEECCEEcccCCCeEEEEECCCCEEEEEEccCChhhCeEEEEEEE
Confidence 4788988889999999999999999999999999999999988753 3555543 3456689999999999999999999
Q ss_pred eCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 210 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
|..|.....+.|.|...... ..|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|..+...
T Consensus 83 n~~g~~~~~~~l~V~~~p~~-----~~~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~~~~~~~ 148 (305)
T 2nzi_A 83 NQGGSVSGTASLEVEVPAKI-----HLPKTLEGMGAVHALRGEVVSIKIPFSGKPDPVITWQKGQDLIDNN 148 (305)
T ss_dssp ETTEEEEEEEEEEECEEEEE-----CCCHHHHSSCCEEEETTCCEEEEEEEEEESCCEEEEEESSSBCCSS
T ss_pred cCCCCccceEEEEEecCCcc-----CCCccccccccEEecCCCEEEEEEEECCCCCCEEEEEECCEECCCC
Confidence 99998888888888642100 1122222235677889999999999999999999999999877643
No 156
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.80 E-value=2.2e-19 Score=140.16 Aligned_cols=157 Identities=11% Similarity=0.085 Sum_probs=107.9
Q ss_pred eeeecCcEEEEEEEccCccce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|+.++|.|.+.|.+... .|.. ...++.+...+....|.|.+++.+|+|.|.|.+.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 90 (210)
T 1lk3_L 11 TVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYFCQQS 90 (210)
T ss_dssp EECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEEEEEE
Confidence 366788999999999886222 3322 1246666656677899999999999999999999
Q ss_pred ecceee--e--eeccC-CCCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCC-CC-eEEEEeC--
Q psy14060 118 KYYALS--D--LSEQK-PAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSS-PD-FQIHTFS-- 186 (283)
Q Consensus 118 n~~~~~--~--~~~~~-~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~-~~-~~~~~~~-- 186 (283)
|..+.. . ...+. ...+|.+........+..|+.+.|.|.+.|. |.+ .+.|+|++..+... .. .......
T Consensus 91 ~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 170 (210)
T 1lk3_L 91 WNGPLTFGAGTKLELKRADAAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDGVLDSVTDQDSKDS 170 (210)
T ss_dssp SSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTTEEEEECCCCTTTC
T ss_pred cCCCceeCCCEEEEEcCCCcCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCCceEccCCccCCCC
Confidence 876421 1 11222 2235666654444445579999999999874 444 89999999987654 10 0000001
Q ss_pred ---CEEEEEEcCCCCCCCEEEEEEEEeCCcee
Q psy14060 187 ---TKSILIMRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 187 ---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
..+.|.|..+..+|.|.|+|.|.|.....
T Consensus 171 ~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 202 (210)
T 1lk3_L 171 TYSMSSTLSLTKADYESHNLYTCEVVHKTSSS 202 (210)
T ss_dssp CEEEEEEEEEEHHHHHTCCEEEEEEECTTCSS
T ss_pred CEEEEEEEEEChHHhccCCcEEEEEEecCCCC
Confidence 12369999999999999999999986543
No 157
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.80 E-value=1.4e-18 Score=144.93 Aligned_cols=194 Identities=10% Similarity=0.025 Sum_probs=118.0
Q ss_pred ceEEEEEcCCee-----eeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccc--e-EEeecCCCEE--
Q psy14060 20 LKSRTASSDRSG-----VSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEI--V-RKITATETTE-- 89 (283)
Q Consensus 20 ~~~~~a~n~~g~-----~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i--~-~~~~~~~~~~-- 89 (283)
.+.|.|.|..|. .+....|.|...+. .|.+. .....+.+|+.+.|.|.+.|.|.. . .|...+....
T Consensus 88 ~Y~C~a~n~~~~~~~~~~~~~~~l~V~~~p~---~p~i~-~~~~~~~~g~~~~l~C~~~g~p~~~~~v~W~k~g~~l~~~ 163 (327)
T 2wng_A 88 TYYCVKFRKGSPDTEFKSGAGTELSVRAKPS---APVVS-GPAARATPQHTVSFTCESHGFSPRDITLKWFKNGNELSDF 163 (327)
T ss_dssp EEEEEEEESSTTCEEEEECCCEEEEEEBCCC---CCEEE-CCSSCBCTTCEEEEEEEEEEEBSSCCEEEEEETTEECCCE
T ss_pred EEEEEeecCCCcceeEeecCcEEEEEEecCC---Cceee-ccccccCCCCEEEEEEEEeCccCCCcEEEEEECCEEcccc
Confidence 467899998664 12446777776543 22222 122347778899999999987621 2 3433221111
Q ss_pred ---EEE--c-C---CEEEEEEccCCCCCCeEEEEEEEeccee------eeeeccCCCCCCeEEecCCceeecCCCcEEEE
Q psy14060 90 ---MEH--K-G---KIQERVVDASELDDDGYYAITERKYYAL------SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFE 154 (283)
Q Consensus 90 ---~~~--~-~---~~~~L~i~~~~~~D~G~Y~C~a~n~~~~------~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~ 154 (283)
... . + ....|.|.....+|.|.|+|.+.|..+. .....+.+..+|.+...+.. +..|+.+.|.
T Consensus 164 ~~~~~~~~~~~~~~~~s~L~i~~~~~d~~g~Y~C~a~n~~~~~~~~~~~~~~~~~v~~~P~i~~~~~~--~~~G~~v~l~ 241 (327)
T 2wng_A 164 QTNVDPVGESVSYSIHSTAKVVLTREDVHSQVICEVAHVTLQGDPLRGTANLSETIRVPPTLEVTQQP--VRAENQVNVT 241 (327)
T ss_dssp EEEEECSSCCSCEEEEEEEEEECCTTGGGCEEEEEEECTTSCSCCEEEEEEGGGTBCBCCEEEEEEEC--CSSTTCCEEE
T ss_pred ccccccccCCCceEEEEEEEEechhcCcCceEEEEEeccccCCCcccceEEeccccCCCCEEEEecCC--cCCCCcEEEE
Confidence 100 1 1 1235777777777789999999997653 12223455667877655443 7789999999
Q ss_pred EEEeeecC-C-EEEEEeCCEecCCCCCeEEEEeCC-----EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE
Q psy14060 155 VEFDGDPL-P-TIKWFREDFPITSSPDFQIHTFST-----KSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 155 C~~~g~p~-~-~~~W~k~~~~~~~~~~~~~~~~~~-----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 219 (283)
|.+.|.++ + .+.|+++|..+.......+..... ...|.|..+..+|.|.|+|.|.|..+......
T Consensus 242 C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~~~L~i~~~~~~d~G~Y~C~a~N~~~~~~s~~ 313 (327)
T 2wng_A 242 CQVRKFYPQRLQLTWLENGNVSRTETASTVTENKDGTYNWMSWLLVNVSAHRDDVKLTCQVEHDGQPAVSKS 313 (327)
T ss_dssp EEEEEEBSSCEEEEEEETTEEEEEEECCSCEECTTSCEEEEEEEEC-------CCEEEEEEEETTCCCEEEE
T ss_pred EEEccccCCCcEEEEEECCeEccCcccCceEECCCCcEEEEEEEEEccccccCCCEEEEEEEeCCCCCchhh
Confidence 99999644 4 799999999875321111111111 14588999999999999999999988754443
No 158
>3vh8_G Killer cell immunoglobulin-like receptor 3DL1; immunoglobulin fold, natural killer cell receptor, immune SY; HET: NAG; 1.80A {Homo sapiens} PDB: 1im9_D
Probab=99.80 E-value=6.6e-19 Score=146.18 Aligned_cols=188 Identities=10% Similarity=-0.010 Sum_probs=118.0
Q ss_pred ceEEEEEcCC-----eeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCE------
Q psy14060 20 LKSRTASSDR-----SGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETT------ 88 (283)
Q Consensus 20 ~~~~~a~n~~-----g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~------ 88 (283)
.+.|.|.|.. +..+....|.|.... ..|.+.......+.+|+.++|.|.+.+.+....+...+...
T Consensus 88 ~Y~C~a~~~~~~~~~~~~s~~~~l~V~~~~---~~p~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~ 164 (316)
T 3vh8_G 88 NYTCRGSHPHSPTGWSAPSNPVVIMVTGNH---RKPSLLAHPGPLVKSGERVILQCWSDIMFEHFFLHKEGISKDPSRLV 164 (316)
T ss_dssp EEEEEEBCSSSSSSBCCCCCCEEEEEECSS---CCCEEEEESCSEEETTCCEEEEEEESSCCSEEEEEETTCCSCCEEEE
T ss_pred EEEEEEEcCCCCcceecCCCcEEEEEecCC---CCCeEEecCCCccCCCCeEEEEEcCCCCCcEEEEEECCCccccceee
Confidence 4678888643 234566777776642 34566655555577899999999997655322232222111
Q ss_pred -EEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee------eeeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEe
Q psy14060 89 -EMEHKGKIQERVVDASELDDDGYYAITERKYYAL------SDLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFD 158 (283)
Q Consensus 89 -~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~------~~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~ 158 (283)
..........|.|.+++.+|+|.|+|.+.|..+. +....+.+ ..+|.+...+. ..+..|+.++|.|.+.
T Consensus 165 ~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~s~~s~~~~l~V~~~~~~p~i~~~~~-~~v~~G~~v~L~C~~~ 243 (316)
T 3vh8_G 165 GQIHDGVSKANFSIGPMMLALAGTYRCYGSVTHTPYQLSAPSDPLDIVVTGPYEKPSLSAQPG-PKVQAGESVTLSCSSR 243 (316)
T ss_dssp CEEETTEEEEEEEECSCCGGGCEEEEEEEECTTCTTBCCCCCCCEEEEEECSSCCCEEEEESC-SCCCTTSCCEEEEEES
T ss_pred eeecCCCceEEEEECCCChhhCceEEEEEecCCCCccccCCCCCEEEEecCCCCCCeEEeCCC-CeecCCCcEEEEEECC
Confidence 1111124578999999999999999999998662 22222222 34566655543 3678899999999997
Q ss_pred eecCCEEEEEeCCEecCCCCCeEEEEe-CCEEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 159 GDPLPTIKWFREDFPITSSPDFQIHTF-STKSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 159 g~p~~~~~W~k~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
. |.+.+.|+|++..+........... .....|.|.++. |+|.|+|.+.|..+.
T Consensus 244 ~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~--D~G~Y~C~a~n~~~~ 297 (316)
T 3vh8_G 244 S-SYDMYHLSREGGAHERRLPAVRKVNRTFQADFPLGPAT--HGGTYRCFGSFRHSP 297 (316)
T ss_dssp S-CCSEEEEEETTSSCCEEEECEECTTSCEEEEEECC-------CEEEEEEEBTTBT
T ss_pred C-CCcEEEEEECCCcCCCceeceeccCCceeEEEEcCCcC--CCEEEEEEeecCCCc
Confidence 5 7889999999876642111000001 123579999998 999999999997654
No 159
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.80 E-value=1.4e-18 Score=133.04 Aligned_cols=135 Identities=15% Similarity=0.305 Sum_probs=102.2
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC--CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS--SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
+|.|...+.+..+.+|+.+.|.|.+.+.|.+.+.|++++..+.. ..++.+.. ...|.|.++..+|+|.|+|.+.|
T Consensus 2 ~~~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~---~~~L~i~~~~~~d~G~Y~C~~~~ 78 (189)
T 2v5t_A 2 MLTFREVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEEVTTISDNRFAMLA---NNNLQILNINKSDEGIYRCEGRV 78 (189)
T ss_dssp CCEEEECCSSEEEETTSCEEECCEEECSSCCEEEEEC-----CBCCCTTEEECT---TSCEEETTCCGGGCEEEEEEEEE
T ss_pred CceeeccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCccceeccCCeEEEec---CCCEEEeeCCHhHCcEEEEEEEE
Confidence 67788888899999999999999999989999999999887753 23333322 23599999999999999999999
Q ss_pred CCceeE--EEEEEEEEeccCCCCCCCCCCeEEecCC--ceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 211 RGGKAK--CSANLVVEEKRQGGRGGVVPPSFLTTIS--SAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 211 ~~g~~~--~~~~l~v~~~~~~~~~~~~~p~~~~~~~--~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
..+... ....+.+.. +|.+..... ...+.+|+.+.|.|.+.|.|.|.+.|+++|..+...
T Consensus 79 ~~~~~~~~~~~~l~v~~----------~p~~~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~v~W~~~g~~~~~~ 142 (189)
T 2v5t_A 79 EARGEIDFRDIIVIVNV----------PPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEEN 142 (189)
T ss_dssp TTTTEEEEEEEEEEEEE----------EEEEECSCCEEEEETTSCCCEEEECEEEEESCCEEEEEETTEECCCS
T ss_pred cCCCceEEEEEEEEecC----------CCCcccccccccccccCCCcEEEEEEEccCCCCeEEEEECCEECcCC
Confidence 875433 334555553 455554433 346788999999999999999999999999988654
No 160
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.80 E-value=2.1e-18 Score=134.86 Aligned_cols=151 Identities=7% Similarity=-0.016 Sum_probs=108.4
Q ss_pred eeeecCcEEEEEEEccCccce-EEeec--------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITA--------------------TETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~--------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|+.++|.|.+.+.+... .|... ..++.+...+....|.|.+++.+|+|.|+|.+.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (213)
T 3nl4_L 12 SEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECADAATYYCQST 91 (213)
T ss_dssp EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEEEEC
T ss_pred EEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChHHCEEEEEecC
Confidence 467788999999999986222 33221 356777666778899999999999999999998
Q ss_pred eccee------e-eeeccCCCCCCeEEecCCceeecCCCcEEEEEEEee-ecCCEEEEEeCCEecCCCCCeEE--E--Ee
Q psy14060 118 KYYAL------S-DLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLPTIKWFREDFPITSSPDFQI--H--TF 185 (283)
Q Consensus 118 n~~~~------~-~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~~~~W~k~~~~~~~~~~~~~--~--~~ 185 (283)
|..+. . .+.......+|.+........+..|+.+.|.|.+.+ .|.+.+.|++++..+........ . ..
T Consensus 92 ~~~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~~~~~~~~~~~~~~~~~~ 171 (213)
T 3nl4_L 92 YENPTYVSFGGGTEVGVKGDPVAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGTTQTTGIENSKTPQNSAD 171 (213)
T ss_dssp CSSTTTCEECCCEEEEEECCCBCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTEECCSSEEEEECCCCTTT
T ss_pred CCCceeEEeCCCeEEEEeCCCcCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCccCCCCeecccCcccCCC
Confidence 86531 1 122222355677666555556677999999999998 89999999999998754210000 0 00
Q ss_pred C---CEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 186 S---TKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 186 ~---~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
+ ..+.|.|..+..+|.|.|+|.|.
T Consensus 172 ~~~~~~s~L~i~~~~~~d~g~Y~C~a~ 198 (213)
T 3nl4_L 172 CTYNLSSTLTLTSTEYNSHKEYTCKVT 198 (213)
T ss_dssp CCEEEEEEEEEEHHHHHTCCEEEEEEE
T ss_pred CeEEEEEEEEecHHHcCCCCeEEEEEE
Confidence 0 12469999999999999999998
No 161
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.80 E-value=8.3e-18 Score=128.95 Aligned_cols=134 Identities=17% Similarity=0.300 Sum_probs=109.4
Q ss_pred CCeEEecCC--ceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 133 PPVFTKKIQ--PCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 133 ~p~~~~~~~--~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
||.+..... ...+.+|+.+.|.|.+.+.|.+.+.|++++..+....++.+. .....|.|.++..+|+|.|+|.+.|
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~--~~~~~L~i~~~~~~d~G~Y~C~~~~ 79 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNGKLIEENEKYILK--GSNTELTVRNIINSDGGPYVCRATN 79 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETTEECCCSSSEEEE--TTTTEEEECSCCGGGCEEEEEEEEE
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECCeEcCCCccEEEe--CCeeEEEEecCChhcCcEEEEEEEc
Confidence 566665544 457888999999999999899999999999998876665543 3345799999999999999999999
Q ss_pred CCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeC--CEEecC
Q psy14060 211 RGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKV--SSLSDV 279 (283)
Q Consensus 211 ~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~--g~~l~~ 279 (283)
..+.......|.|.. +|.+... ....+..|+.+.|.|.+.|.|.+.+.|+++ |..+..
T Consensus 80 ~~~~~~~~~~l~V~~----------~p~~~~~-~~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~ 139 (192)
T 2va4_A 80 KAGEDEKQAFLQVFV----------QPHIIQL-KNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTE 139 (192)
T ss_dssp TTEEEEEEEEEEEEE----------EEEEEEE-CCEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECT
T ss_pred cccccceEEEEEEEc----------cCccccc-CcceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeec
Confidence 999888888888874 4555543 345678899999999999999999999998 666543
No 162
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.80 E-value=9.2e-19 Score=137.31 Aligned_cols=159 Identities=13% Similarity=0.141 Sum_probs=106.7
Q ss_pred eeeecCcEEEEEEEccC-c--cceEEee------------------------cCCCEEEEEcCCEEEEEEccCCCCCCeE
Q psy14060 59 EIHTAKSQQVQKEKKGD-K--EIVRKIT------------------------ATETTEMEHKGKIQERVVDASELDDDGY 111 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~-~--~i~~~~~------------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 111 (283)
.+.+|+.++|.|.+.+. + .+ .|.. ...++.+...+...+|.|.+++.+|+|.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~v-~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 89 (218)
T 3s96_B 11 SFSLGASAKLTCTLNSQHSTYTI-EWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISNIQPEDEAI 89 (218)
T ss_dssp EEETTSCEEEEEEECGGGTTCCE-EEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EECCCCcEEEEEECCCCCCCcEE-EEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEccCCcccCEE
Confidence 36678899999999988 5 33 2222 1135665556678899999999999999
Q ss_pred EEEEEEecce------eeeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCCCC
Q psy14060 112 YAITERKYYA------LSDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSSPD 179 (283)
Q Consensus 112 Y~C~a~n~~~------~~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~~~ 179 (283)
|.|.+.|..+ ......+.+ ..+|.+...........|+.+.|.|.+.+ .|.+ .+.|++++..+.....
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~ 169 (218)
T 3s96_B 90 YICGVGDTIKEQFVYVFGGGTKVTVLGQPKSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTVAWKANGTPITQGVD 169 (218)
T ss_dssp EEEEEEEEETTEEEEEECCCEEEEEESCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEC-----
T ss_pred EEEEEecCCCCceeEEEcCcEEEEEecCCCCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEEEEEECCEECcCcee
Confidence 9999988763 111112222 25666665555555566789999999998 4666 8999999998865211
Q ss_pred e-E-EEEeCC---EEEEEEcCCCCCCCEEEEEEEEeCCceeEEE
Q psy14060 180 F-Q-IHTFST---KSILIMRQVFMEDSGVFAVIAENRGGKAKCS 218 (283)
Q Consensus 180 ~-~-~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 218 (283)
. . ....+. .+.|.|.....+|.|.|+|.|.|..+.....
T Consensus 170 ~~~~~~~~~~~~~~s~l~i~~~~~~d~g~Y~C~a~n~~~~~~~~ 213 (218)
T 3s96_B 170 TSNPTKEGNKFMASSFLHLTSDQWRSHNSFTCQVTHEGDTVEKS 213 (218)
T ss_dssp ---------CEEEEEEEEEEHHHHHTCSCEEEEEEETTEEEEEE
T ss_pred cCcccccCCcEEEEEEEEEeHHHccCCCeEEEEEEeCCCccccc
Confidence 1 1 111111 1347788888888999999999998765543
No 163
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.80 E-value=2.1e-18 Score=135.55 Aligned_cols=140 Identities=14% Similarity=0.141 Sum_probs=112.1
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
..+.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.... ...|.|.++..+|+|.|+|.+.|.
T Consensus 17 ~~~~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~~~n~ 87 (218)
T 3k0w_A 17 RGSKITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMNKEIPNGN---------TSELIFNAVHVKDAGFYVCRVNNN 87 (218)
T ss_dssp --CCEEECCCCEEEETTSBEEEECEETTTTSSEEEEEETTEECTTCC---------SSEEEETTCCGGGCEEEEEEEECT
T ss_pred CCCEEEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECCEECCCCC---------CCEEEEccCChhhCeEeEEEEEcC
Confidence 46778888888999999999999999998999999999999886542 246999999999999999999998
Q ss_pred Ccee-EEEEEEEEEeccCC-----CCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 212 GGKA-KCSANLVVEEKRQG-----GRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 212 ~g~~-~~~~~l~v~~~~~~-----~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
.+.. ...+.|.|...... ......+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+++|..+...
T Consensus 88 ~~~~~s~~~~l~V~~~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~~~~~~~ 162 (218)
T 3k0w_A 88 FTFEFSQWSQLDVCDIPESFQRSVDGVSESKLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHE 162 (218)
T ss_dssp TCCEECCCEEEEEECCCGGGCTTCCSBCCSSCEEEECCCCEEECTTCCEEEECEEEBSSCCEEEEEETTEECTTC
T ss_pred CCCceeeEEEEEEEccCcccccccccccCCCceEEECCCceeecCCCcEEEEEEecccCCCeEEEEECCEECCCC
Confidence 7754 44467777653110 000112367777788889999999999999999999999999999988654
No 164
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.79 E-value=2e-18 Score=119.93 Aligned_cols=94 Identities=23% Similarity=0.423 Sum_probs=87.8
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.||.|...+.+..+..|+.+.|.|.+.|.|.|.+.|+|++..+..+.++.+...+..++|.|.++..+|+|.|+|.|.|.
T Consensus 12 ~pP~f~~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 91 (107)
T 3knb_B 12 SPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNA 91 (107)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCcEEEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEEC
Confidence 47889999999999999999999999999999999999999999888888888888889999999999999999999999
Q ss_pred CceeEEEEEEEEEe
Q psy14060 212 GGKAKCSANLVVEE 225 (283)
Q Consensus 212 ~g~~~~~~~l~v~~ 225 (283)
.|.....+.|.|..
T Consensus 92 ~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 92 AGEAYAAAAVTVLE 105 (107)
T ss_dssp TEEEEEEEEEEEEC
T ss_pred CCEEEEEEEEEEEc
Confidence 99999999999875
No 165
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.79 E-value=4.2e-19 Score=138.64 Aligned_cols=160 Identities=9% Similarity=0.078 Sum_probs=111.1
Q ss_pred eeeecCcEEEEEEEccCccceEEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEe
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIVRKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAITERK 118 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 118 (283)
.+.+|+.++|.|.+...+.+ .|.. ...++.+.......+|.|.+++.+|+|.|+|.+.|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~v-~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 89 (211)
T 3tv3_L 11 SGSPGQSITISCTGTSNNFV-SWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCGSLV 89 (211)
T ss_dssp EECTTCEEEEEEECCCSSCE-EEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEEEEE
T ss_pred EEcCCCCEEEEEEECCCCeE-EEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEEEec
Confidence 36678899999999822233 2222 23466666666788999999999999999999998
Q ss_pred cce---eeeeeccCCC----CCCeEEecCCceeecCCCcEEEEEEEeeec--CCEEEEEeCCEecCCCCCe--EEEEeCC
Q psy14060 119 YYA---LSDLSEQKPA----KPPVFTKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFREDFPITSSPDF--QIHTFST 187 (283)
Q Consensus 119 ~~~---~~~~~~~~~~----~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~~~~~~~~~~--~~~~~~~ 187 (283)
..+ ......+.+. .+|.+...+....+..|+.+.|.|.+.|.+ .+.+.|++++..+...... .......
T Consensus 90 ~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~ 169 (211)
T 3tv3_L 90 GNWDVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKAGVETTTPSKQSNN 169 (211)
T ss_dssp TTTEEEECCCEEEEECCSCCBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEECTTS
T ss_pred CCCceeECCCceEEEeCCCCcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCCCcccCCceECCCC
Confidence 765 1222222222 577777666555555799999999999863 4789999999987542110 0001111
Q ss_pred ----EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE
Q psy14060 188 ----KSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 188 ----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 219 (283)
...|.|..+..+|.|.|+|.+.|..+.....+
T Consensus 170 ~~~~~s~L~i~~~~~~d~g~Y~C~v~~~~~~~~~~~ 205 (211)
T 3tv3_L 170 KYAASSYLSLTPEQWKSHRSYSCQVTHEGSTVEKTV 205 (211)
T ss_dssp SEEEEEEEEECHHHHHHSSCEEEEEEETTEEEEEEE
T ss_pred CEEEEEEEEEcHHHhCCCCeEEEEEEECCCCEEeec
Confidence 24688988888899999999999986655443
No 166
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.79 E-value=1.2e-17 Score=147.72 Aligned_cols=218 Identities=11% Similarity=0.064 Sum_probs=129.9
Q ss_pred eeeecCcEEEEEEEccCc------cceEEee------------------------cCCCEEEEEc--CCEEEEEEccCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK------EIVRKIT------------------------ATETTEMEHK--GKIQERVVDASEL 106 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~------~i~~~~~------------------------~~~~~~~~~~--~~~~~L~i~~~~~ 106 (283)
.+.+|+.++|.|.+.+.+ .+ .|.. ...|+.+..+ .+..+|.|.+++.
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v-~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 89 (512)
T 1zvo_C 11 LVKPSETLSLTCIVSGGPIRRTGYYW-GWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLRSMSA 89 (512)
T ss_pred EEcCCCCEEEEEEEcccccCCCCeeE-EEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEECcCCH
Confidence 366788999999998643 12 1211 1235554432 3468999999999
Q ss_pred CCCeEEEEEEEecce--------------eeeeeccCCC----CCCeEEe-cCCceeecCCCcEEEEEEEeee-cCC-EE
Q psy14060 107 DDDGYYAITERKYYA--------------LSDLSEQKPA----KPPVFTK-KIQPCRAFEQDQARFEVEFDGD-PLP-TI 165 (283)
Q Consensus 107 ~D~G~Y~C~a~n~~~--------------~~~~~~~~~~----~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~-p~~-~~ 165 (283)
+|+|.|.|.+.+..+ ......+.+. .+|.+.. .+.......++.+.|.|.+.|. |.+ .+
T Consensus 90 ~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~~~~~v~L~C~~~g~~P~p~~v 169 (512)
T 1zvo_C 90 ADTAMYYCARGNPPPYYDIGTGSDDGIDVWGQGTTVHVSSAPTKAPDVFPIISGCRHPKDNSPVVLACLITGYHPTSVTV 169 (512)
T ss_pred HHCEEEEEEEECCCCccccccccccccccccCceEEEecccCCcCCeEEeccCCcccccCCCeEEEEEEEEeeecCceEE
Confidence 999999999877531 1111222222 2454432 2111102246899999999986 665 89
Q ss_pred EEEeCCEecCCCCCeEEEE-eCC---EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE-----------EEEEEeccC--
Q psy14060 166 KWFREDFPITSSPDFQIHT-FST---KSILIMRQVFMEDSGVFAVIAENRGGKAKCSA-----------NLVVEEKRQ-- 228 (283)
Q Consensus 166 ~W~k~~~~~~~~~~~~~~~-~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~-----------~l~v~~~~~-- 228 (283)
+|++++............. .+. .+.|.|...... .|.|+|.+.|..+...... .+.+.....
T Consensus 170 ~W~~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~-~g~ytC~v~n~~~~~~~~~~~~~~~~~~~~~v~l~~pp~~~ 248 (512)
T 1zvo_C 170 TWYMGTQSQPQRTFPEIQRRDSYYMTSSQLSTPLQQWR-QGEYKCVVQHTASKSKKEIFRWPESPKAQASSVPTAQPQAE 248 (512)
T ss_pred EEEcCcccCceEecCceecCCCCEEEEEEEEEcHHHcC-CceEEEEEEeCCCCceEEEecCCCCCCcCCEEEEeCCCchh
Confidence 9999754321000000111 111 235888877776 8999999999987655443 223321000
Q ss_pred --C--------------------------------------CCCCCCCCeE-EecCCceEEcCCCeEEEEEEEEeeCCC-
Q psy14060 229 --G--------------------------------------GRGGVVPPSF-LTTISSAVINVGQLARFDAKISATKPL- 266 (283)
Q Consensus 229 --~--------------------------------------~~~~~~~p~~-~~~~~~~~v~~g~~v~L~C~~~g~p~~- 266 (283)
. ......+|.+ +..+....+.+|+.+.|.|.+.|.+++
T Consensus 249 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~p~v~~~~p~~~~~~~g~~~~L~C~v~g~~P~~ 328 (512)
T 1zvo_C 249 GSLAKATTAPATTRNTGRGGEEKKKEKEKEEQEERETKTPECPSHTQPLGVYLLTPAVQDLWLRDKATFTCFVVGSDLKD 328 (512)
T ss_pred ccccccccCchhhccCcccccceeccCCcccccccCcccccCCCCCCCCEEEEECCChHHhccCCceEEEEEEeceECCC
Confidence 0 0001124444 333444457789999999999986333
Q ss_pred -eeEEeeCCEEec
Q psy14060 267 -DVYWLKVSSLSD 278 (283)
Q Consensus 267 -~v~W~~~g~~l~ 278 (283)
.|+|++||+.+.
T Consensus 329 ~~i~W~k~g~~~~ 341 (512)
T 1zvo_C 329 AHLTWEVAGKVPT 341 (512)
T ss_pred eEEEEEECCEecc
Confidence 899999998865
No 167
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.79 E-value=5.4e-18 Score=136.47 Aligned_cols=167 Identities=10% Similarity=0.075 Sum_probs=115.9
Q ss_pred eeeecCcEEEEEEEccCc----cce----------EEe--------------ecCCCEEEEEc--CCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIV----------RKI--------------TATETTEMEHK--GKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~----------~~~--------------~~~~~~~~~~~--~~~~~L~i~~~~~~D 108 (283)
.+.+|++|+|.|.+.|.+ .+. ..+ ....++.+... .....|.|.+++.+|
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 92 (256)
T 3umt_A 13 LVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSLTSED 92 (256)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCCCccc
Confidence 366788999999998854 221 111 01245555432 457789999999999
Q ss_pred CeEEEEEEEec----ce-eeeeeccCCC----------------CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEE
Q psy14060 109 DGYYAITERKY----YA-LSDLSEQKPA----------------KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKW 167 (283)
Q Consensus 109 ~G~Y~C~a~n~----~~-~~~~~~~~~~----------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W 167 (283)
+|.|.|.+.|. .. ......+.+. .+|.+...+....+.+|++++|.|.+.+.|.+.+.|
T Consensus 93 sG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W 172 (256)
T 3umt_A 93 SAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIGSNLNW 172 (256)
T ss_dssp CEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCTTCEEE
T ss_pred CEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCCcEEEE
Confidence 99999999887 11 1111222222 266777777778899999999999999988889999
Q ss_pred EeC--CEecC------------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeE-EEEEEEEEe
Q psy14060 168 FRE--DFPIT------------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEE 225 (283)
Q Consensus 168 ~k~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 225 (283)
||+ +..+. ...++.....+...+|.|.++..+|+|.|+|.+.|...... .-..|.|..
T Consensus 173 ~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~fg~gt~L~V~~ 245 (256)
T 3umt_A 173 LQQKPDGTIKRLIYATSSLDSGVPKRFSGSRSGSDYSLTISSLESEDFVDYYCLQYASSPPTFGGGTKLEIKR 245 (256)
T ss_dssp EEECTTCCEEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEECSSSSCEECCCEEEEEC-
T ss_pred EEECCCCCcEEEEEeccccCCccCCCEEEecCCCEEEEEECCCChhHCEEEEEEEeeCCCcEECCCEEEEEEC
Confidence 984 22111 12456666666777899999999999999999988654322 235566654
No 168
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.79 E-value=2e-18 Score=134.96 Aligned_cols=139 Identities=11% Similarity=0.097 Sum_probs=106.8
Q ss_pred CeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--Ee---c---------CCCCCeEEEEeCCEEEEEEcCCCCC
Q psy14060 134 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FP---I---------TSSPDFQIHTFSTKSILIMRQVFME 199 (283)
Q Consensus 134 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~---~---------~~~~~~~~~~~~~~~~l~i~~~~~~ 199 (283)
|.+...+....+.+|+++.|.|.+.+.|.+.+.|||+. .. + ....++.+...+...+|.|.++..+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 2 VVMTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSGSGTDFTLTISDLECA 81 (213)
T ss_dssp CCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEECSCCGG
T ss_pred ccEEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEecCCCEEEEEECCCChH
Confidence 34556677788999999999999999889999999842 11 1 0134666666667788999999999
Q ss_pred CCEEEEEEEEeCCc---eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCCeeEEeeCCE
Q psy14060 200 DSGVFAVIAENRGG---KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPLDVYWLKVSS 275 (283)
Q Consensus 200 d~G~Y~C~a~n~~g---~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~~v~W~~~g~ 275 (283)
|+|.|+|.+.|..+ .......+.|.... .+|.+...+....+.+|+.++|.|.+.| .|.|.+.|++||+
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~-------~~p~v~~~~~~~~~~~g~~v~l~C~~~g~~P~~~v~W~k~g~ 154 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKGDP-------VAPTVLIFPPSADLVATGTVTIVCVANKYFPDVTVTWEVDGT 154 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEECCC-------BCCEEEEECCCHHHHTTSEEEEEEEEEEEBSCCEEEEEETTE
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeCCC-------cCCeEEEeCCchhhccCCcEeEEEEEecccCCcEEEEEeCCc
Confidence 99999999999776 33334556665321 4677766555556678999999999998 8988999999999
Q ss_pred EecC
Q psy14060 276 LSDV 279 (283)
Q Consensus 276 ~l~~ 279 (283)
.+..
T Consensus 155 ~~~~ 158 (213)
T 3nl4_L 155 TQTT 158 (213)
T ss_dssp ECCS
T ss_pred cCCC
Confidence 8864
No 169
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.79 E-value=1.9e-18 Score=135.02 Aligned_cols=157 Identities=11% Similarity=0.101 Sum_probs=107.9
Q ss_pred eeeecCcEEEEEEEccCcc---ce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKE---IV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAI 114 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~---i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 114 (283)
.+.+|+.++|.|.+.|.+. .. .|.. ...++.....+....|.|.+++.+|+|.|.|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (212)
T 1q0x_L 11 TTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEAIYFC 90 (212)
T ss_dssp EECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred eecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCEEEEE
Confidence 3667889999999988651 22 2321 1245665555677899999999999999999
Q ss_pred EEEeccee--ee--eeccC--CCCCCeEEecCCceeecCCCcEEEEEEEeeecC-C-EEEEEeCCEecCCCCCe-EEEEe
Q psy14060 115 TERKYYAL--SD--LSEQK--PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPL-P-TIKWFREDFPITSSPDF-QIHTF 185 (283)
Q Consensus 115 ~a~n~~~~--~~--~~~~~--~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~-~-~~~W~k~~~~~~~~~~~-~~~~~ 185 (283)
.+.|..+. .. ...+. ...+|.+...........|+.+.|.|.+.+.++ + .+.|+|++..+...... .....
T Consensus 91 ~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~ 170 (212)
T 1q0x_L 91 ALWSNNKLVFGGGTKLTVLGQPKSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTAGMETTQPSKQ 170 (212)
T ss_dssp EEECSSCEEECCCEEEEECCSCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECTTEEECCCEEC
T ss_pred EEecCchhhcCCCeEEEEecCCCCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCCCeecCCceeC
Confidence 99987642 11 11221 124677665544444557889999999998644 3 89999999987653110 01111
Q ss_pred C-----CEEEEEEcCCCCCCCEEEEEEEEeCCcee
Q psy14060 186 S-----TKSILIMRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 186 ~-----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
. ..+.|.|.....+|.|.|+|.|.|.....
T Consensus 171 ~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 205 (212)
T 1q0x_L 171 SNNKYMASSYLTLTARAWERHSSYSCQVTHEGHSS 205 (212)
T ss_dssp TTSCEEEEEEEEEEHHHHTTCCEEEEEEEETTEEE
T ss_pred CCCCEEEEEEEEEcHHHccCCCcEEEEEEeCCcce
Confidence 1 12468898888899999999999987553
No 170
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.79 E-value=1.3e-19 Score=139.02 Aligned_cols=142 Identities=13% Similarity=0.126 Sum_probs=97.7
Q ss_pred eeecCcEEEEEEEccCccceEEeecCCCEEEEEcCCEEEEEEcc-CCCCCCeEEEEEEEeccee-eeeeccCC--CCCCe
Q psy14060 60 IHTAKSQQVQKEKKGDKEIVRKITATETTEMEHKGKIQERVVDA-SELDDDGYYAITERKYYAL-SDLSEQKP--AKPPV 135 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~~~~~~~~~L~i~~-~~~~D~G~Y~C~a~n~~~~-~~~~~~~~--~~~p~ 135 (283)
...|+.+.|.|.+.|.+.+ .|...+...... ....|.|.+ ++.+|+|.|+|.|.|..+. .....+.+ ..++.
T Consensus 11 ~~~G~~v~L~C~~~~~~~i-~W~k~g~~l~~~---~~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~v~~~~~~~ 86 (186)
T 1jbj_A 11 SISGTSVELTCPLDSDENL-KWEKNGQELPQK---HDKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKARVGSADDAK 86 (186)
T ss_dssp EEETTEEEEECSSCCCTTC-EEEETTEEECSC---CCSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCCCCSCCCCC
T ss_pred EeCCcEEEEEEeCCCCCce-EEEECCEECCCC---CCCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEEEecccccc
Confidence 4568899999999984454 444433222111 234799999 9999999999999998774 22222221 11111
Q ss_pred E----------------E----ecCCc---eeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEE
Q psy14060 136 F----------------T----KKIQP---CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 192 (283)
Q Consensus 136 ~----------------~----~~~~~---~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~ 192 (283)
. . ..... ..+..|+++.|.|.+ |.|.+.|+|++..+..... ....|.
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~~~~~-------~~~~L~ 156 (186)
T 1jbj_A 87 KDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIISPLNA-------TKNTWN 156 (186)
T ss_dssp CCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECCCSSC-------CSSCCE
T ss_pred cccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECcccCC-------CcceEE
Confidence 0 0 00001 134489999999988 7899999999999864322 334599
Q ss_pred EcCCCCCCCEEEEEEEEeCCcee
Q psy14060 193 MRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
|.++..+|+|.|+|.|.|..|..
T Consensus 157 i~~v~~~D~G~Y~C~a~N~~g~~ 179 (186)
T 1jbj_A 157 LGNNAKDPRGTYQCQGAKETSNP 179 (186)
T ss_dssp EEETTSCCEEEEEEEESSCEEEE
T ss_pred ECCCCcCcCEEEEEEEEcCcCCc
Confidence 99999999999999999998775
No 171
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.79 E-value=6.7e-19 Score=137.64 Aligned_cols=156 Identities=10% Similarity=0.073 Sum_probs=109.4
Q ss_pred eeeecCcEEEEEEEccCccce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|+.++|.|.+.+.+... .|.. ...++.+...+....|.|.+++.+|+|.|+|.+.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (213)
T 3r06_A 12 PASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESEDIGSYYCQQY 91 (213)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEEC
T ss_pred EecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcccCEEEEEecc
Confidence 366788999999999986221 3322 2456666666678899999999999999999998
Q ss_pred ecce--ee---eeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecC--CEEEEEeCCEecCCCC--CeEEEEe--C
Q psy14060 118 KYYA--LS---DLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPL--PTIKWFREDFPITSSP--DFQIHTF--S 186 (283)
Q Consensus 118 n~~~--~~---~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~~~W~k~~~~~~~~~--~~~~~~~--~ 186 (283)
|..+ .. .+.......+|.+...+....+..|+.+.|.|.+.+.++ +.+.|+|++..+.... ....... +
T Consensus 92 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~~~~~g 171 (213)
T 3r06_A 92 YNYPWTFGPGTKLEIKRADAKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSEKRDGVLQSVTDQDSKDS 171 (213)
T ss_dssp SSSSCEECCCEEEEECCCCBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEEECCCCTTTC
T ss_pred cCCceEEcCCceEEEeccCCCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcccCCceEeccCceeCCCC
Confidence 8643 11 122222356777776666666667888999999998754 3899999999876431 0000000 0
Q ss_pred ---CEEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 187 ---TKSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 187 ---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
..+.|.|.....+|.|.|+|.+.|....
T Consensus 172 ~~~~~s~l~i~~~~~~d~g~YtC~v~n~~~~ 202 (213)
T 3r06_A 172 TYSLSSTLSLTKADYERHNLYTCEVTHKTST 202 (213)
T ss_dssp CEEEEEEEEEEHHHHHTCCEEEEEEEETTCS
T ss_pred cEEEEEEEEeCHHHhccCCeEEEEEEecccC
Confidence 1235778888888999999999998644
No 172
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.79 E-value=2.5e-19 Score=140.41 Aligned_cols=140 Identities=19% Similarity=0.312 Sum_probs=110.6
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC--CeEEEEeCCE--EEEEEcCCCCCCCEEEEE
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP--DFQIHTFSTK--SILIMRQVFMEDSGVFAV 206 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~--~~~~~~~~~~--~~l~i~~~~~~d~G~Y~C 206 (283)
..+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+.... ...+...... ..+.|.++..+|+|.|+|
T Consensus 7 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C 86 (217)
T 2vr9_A 7 YQSPRIIEHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKDGEPVSTNEKKSHRVQFKDGALFFYRTMQGKKEQDGGEYWC 86 (217)
T ss_dssp CCCCEEEECCCCEEECTTSCEEECCEEECSSCCEEEEEETTEECCCSSSSSSEEECTTSCEEESSCCBSSSCBCCEEEEE
T ss_pred cCCCEEecCCCceEEeCCCcEEEEEEcCCCCCCeEEEEECCcCccCCCccceeEEecCCceEEEEEeccCCcccCceEEE
Confidence 458888888888999999999999999998999999999999886542 2222222221 123678899999999999
Q ss_pred EEEeCCceeEE-EEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEE-EeeCCCeeEEeeCCEEecC
Q psy14060 207 IAENRGGKAKC-SANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKI-SATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 207 ~a~n~~g~~~~-~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~-~g~p~~~v~W~~~g~~l~~ 279 (283)
.+.|..|.... ...+.|.. .+|.+...+....+..|+.+.|.|.+ .+.|.|.+.|+++|..+..
T Consensus 87 ~~~n~~g~~~~~~~~l~v~~---------~~~~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~g~~~~~ 152 (217)
T 2vr9_A 87 VAKNRVGQAVSRHASLQIAV---------LRDDFRVEPKDTRVAKGETALLECGPPKGIPEPTLIWIKDGVPLDD 152 (217)
T ss_dssp EEEETTEEEECCCEEEEECE---------ECCSCSBCCCCEEECTTSCEEECCBCCCEESCCEEEEEETTEEECC
T ss_pred EEecCCCccccccceEEEEE---------eCCCcEECCCccEEcCCCeEEEEEECCCCCCCCeEEEEECCcCCCc
Confidence 99999887533 45666654 24556666677889999999999999 8999999999999999873
No 173
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.79 E-value=1.2e-17 Score=129.50 Aligned_cols=161 Identities=9% Similarity=-0.031 Sum_probs=105.8
Q ss_pred CCCceeeecCCeeeecCcEEEEEEEccCccceEEeecCCCEEE-------EEcCCEEEEEEccCCCCCCeEEEEEEEecc
Q psy14060 48 PEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEM-------EHKGKIQERVVDASELDDDGYYAITERKYY 120 (283)
Q Consensus 48 ~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~-------~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 120 (283)
++|.+...+...+.+|+.++|.|.+.+......|...+..... ........|.|.+++.+|+|.|+|.+.|..
T Consensus 7 ~~P~i~~~p~~~v~~G~~v~L~C~~~~~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~~~~ 86 (201)
T 1nkr_A 7 RKPSLLAHPGPLVKSEETVILQCWSDVMFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGSVTH 86 (201)
T ss_dssp CCCEEEEESCSEEETTCCEEEEEEESSCCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEEBTT
T ss_pred CCCeEEEEcCCccCCCCcEEEEEeccCCCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEecCC
Confidence 3566665555567889999999999754322234333322211 111235789999999999999999998642
Q ss_pred e------eeeeeccC---CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeC-CEEE
Q psy14060 121 A------LSDLSEQK---PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS-TKSI 190 (283)
Q Consensus 121 ~------~~~~~~~~---~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~-~~~~ 190 (283)
. .+....+. ...+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|++..+...........+ ....
T Consensus 87 ~~~~~~~~s~~~~l~V~~~~~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~ 164 (201)
T 1nkr_A 87 SPYQVSAPSDPLDIVIIGLYEKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHERRLPAGPKVNGTFQAD 164 (201)
T ss_dssp BTTCCCCCCCCEEEEEECSSCCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSCEEEECEEEETTEEEEE
T ss_pred CCccccCCCCCEEEEeeccCCCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccCcccccccccCCceEEE
Confidence 1 11111222 234566665554 46889999999999986 67899999999866432111111111 1457
Q ss_pred EEEcCCCCCCCEEEEEEEEeCC
Q psy14060 191 LIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 191 l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
|.|.++. |+|.|+|.|.+..
T Consensus 165 L~i~~v~--d~G~Y~C~a~~~~ 184 (201)
T 1nkr_A 165 FPLGPAT--HGGTYRCFGSFHD 184 (201)
T ss_dssp EEEEECC--SCEEEEEEEEETT
T ss_pred EEeCCcC--CCeeEEEEEEcCC
Confidence 9999998 9999999998764
No 174
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.79 E-value=1.8e-18 Score=138.33 Aligned_cols=125 Identities=10% Similarity=0.053 Sum_probs=88.6
Q ss_pred EEEEEccCCCCCCeEEEEEEEecceee------eeeccCCCC---CCeEEe-cCCceeecCCCcEEEEEEEeeecCCEEE
Q psy14060 97 QERVVDASELDDDGYYAITERKYYALS------DLSEQKPAK---PPVFTK-KIQPCRAFEQDQARFEVEFDGDPLPTIK 166 (283)
Q Consensus 97 ~~L~i~~~~~~D~G~Y~C~a~n~~~~~------~~~~~~~~~---~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~~~~~ 166 (283)
..|.|.+++.+|+|.|+|.+.|..+.. ....+.+.. +|.+.. .+....+..|+.+.|.|.+.+.|.|.+.
T Consensus 90 ~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~ 169 (250)
T 2fbo_J 90 PTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHTPSNNVHVSTAEVVQVDEGNDITMTCPCTDCANANVT 169 (250)
T ss_dssp CCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTSCCSCCEECCCSEEECCTTCCEEECCCEESCTTCEEE
T ss_pred ceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccCCCCeEEEecCceEEecCCCcEEEEEEecCCCCCeeE
Confidence 479999999999999999999876521 122333322 333333 3445677789999999999999999999
Q ss_pred EEeCCEecCCCCCe----------------------EEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCc---eeEEEEEE
Q psy14060 167 WFREDFPITSSPDF----------------------QIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG---KAKCSANL 221 (283)
Q Consensus 167 W~k~~~~~~~~~~~----------------------~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g---~~~~~~~l 221 (283)
|+|++..+...... ..... ....|.|.++..+|+|.|+|.|.|..| .....+.|
T Consensus 170 W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l 248 (250)
T 2fbo_J 170 WYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS-GARNLVIRAAKITDAGRVWCELATGQGELDADRSSTIL 248 (250)
T ss_dssp EEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE-TTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEE
T ss_pred EEeCCCcccccccCcceeEeccCCCCccccCceEecccccC-CccEEEEecCCcccCEEEEEEecCCccccCccceeEEE
Confidence 99998877542211 11111 124799999999999999999999554 44444444
Q ss_pred E
Q psy14060 222 V 222 (283)
Q Consensus 222 ~ 222 (283)
.
T Consensus 249 ~ 249 (250)
T 2fbo_J 249 K 249 (250)
T ss_dssp E
T ss_pred e
Confidence 3
No 175
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.79 E-value=4.5e-19 Score=138.44 Aligned_cols=165 Identities=12% Similarity=0.049 Sum_probs=109.0
Q ss_pred eeeecCcEEEEEEEccCccc--e--EEeecCC------------------------CEEEE---EcCCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDKEI--V--RKITATE------------------------TTEME---HKGKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i--~--~~~~~~~------------------------~~~~~---~~~~~~~L~i~~~~~~ 107 (283)
.+.+|++++|.|.+.+.+.. . .|..... ++... ......+|.|.+++.+
T Consensus 10 tv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 89 (218)
T 4frw_A 10 TVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLRNAVQA 89 (218)
T ss_dssp EEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEESSCCGG
T ss_pred EEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEeeccHH
Confidence 36678899999999987721 1 3332111 11110 0112456999999999
Q ss_pred CCeEEEEEEEecceeee--eeccCC-CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEE
Q psy14060 108 DDGYYAITERKYYALSD--LSEQKP-AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT 184 (283)
Q Consensus 108 D~G~Y~C~a~n~~~~~~--~~~~~~-~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~ 184 (283)
|+|.|.|.+.+..+... ...+.+ ..++..........+..|+.+.+.|.+.+.|.|.++|++++..+..........
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~~~~~~~~~~~~ 169 (218)
T 4frw_A 90 DEGEYECRVSTFPAGSFQARLRLRVLVPPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKGTTSSRSFKHSR 169 (218)
T ss_dssp GCEEEEEEEEEETTEEEEEEEEEEEEBCCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCCEEEEEEEECSS
T ss_pred HCCceeEEEEeccCceeeeEEEEEEeeeccceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcccccCceEecCC
Confidence 99999999887654211 111111 223333444555677888999999999999999999999987664321111000
Q ss_pred -eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEE
Q psy14060 185 -FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223 (283)
Q Consensus 185 -~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 223 (283)
....+.|.|..+..+|.|.|+|.|.|..|.....+.+.|
T Consensus 170 ~~~~~s~L~i~~~~~~d~g~YtC~a~N~~g~~~~~~t~~v 209 (218)
T 4frw_A 170 SAAVTSEFHLVPSRSMNGQPLTCVVSHPGLLQDQRITHIL 209 (218)
T ss_dssp SEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred cEEEEEEEEEeeCCHHhCeEEEEEEEeCCCCeEEEEEEEE
Confidence 011346999999999999999999999987666555544
No 176
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.79 E-value=9.6e-18 Score=135.01 Aligned_cols=153 Identities=11% Similarity=0.058 Sum_probs=109.0
Q ss_pred eeeecCcEEEEEEEccC--c--cceEEee-------------------------cCCCEEEEE--cCCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGD--K--EIVRKIT-------------------------ATETTEMEH--KGKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~--~--~i~~~~~-------------------------~~~~~~~~~--~~~~~~L~i~~~~~~ 107 (283)
.+.+|++|+|.|.+.+. + .+ .|.. ...++.+.. .+...+|.|.+++.+
T Consensus 17 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 95 (256)
T 3juy_B 17 VKKPGASVKVSCQASGYRFSHFTV-HWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSLRSA 95 (256)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCE-EEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eecCCCeEEEEEEeecccccCceE-EEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCEEEEEECCCCcc
Confidence 36678899999999883 2 22 2211 123566653 345788999999999
Q ss_pred CCeEEEEEEEec------------ce-eeeeeccCCCC---------------CCeEEecCCceeecCCCcEEEEEEEee
Q psy14060 108 DDGYYAITERKY------------YA-LSDLSEQKPAK---------------PPVFTKKIQPCRAFEQDQARFEVEFDG 159 (283)
Q Consensus 108 D~G~Y~C~a~n~------------~~-~~~~~~~~~~~---------------~p~~~~~~~~~~~~~g~~v~l~C~~~g 159 (283)
|+|.|.|.+.|. .. ......+.+.. ++.+...+....+.+|++++|.|.+.+
T Consensus 96 DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 175 (256)
T 3juy_B 96 DTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPGERATFSCRSSH 175 (256)
T ss_dssp GCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTTSCEEEEEEESS
T ss_pred cCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCCCCEEEEEEECC
Confidence 999999999886 11 11111222221 456677778889999999999999998
Q ss_pred ecC-CEEEEEeC--CEecC------------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCC
Q psy14060 160 DPL-PTIKWFRE--DFPIT------------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 160 ~p~-~~~~W~k~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
.+. +.+.|||. +..+. ...++.+.......+|.|.++..+|+|.|+|.+.|..
T Consensus 176 ~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 243 (256)
T 3juy_B 176 SIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSGSGTDFTLTITRVEPEDFALYYCQVYGAS 243 (256)
T ss_dssp CCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCSEEEEEECCSS
T ss_pred CcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEccCCEEEEEECCCCHhHCEEEEEEEeeCC
Confidence 776 89999983 22111 2345666666677889999999999999999998854
No 177
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.79 E-value=1e-18 Score=137.45 Aligned_cols=165 Identities=10% Similarity=0.051 Sum_probs=110.3
Q ss_pred eeecCcEEEEEEEccCcc-----ce-EEeecC-------------------CCEEEEE---cCCEEEEEEccCCCCCCeE
Q psy14060 60 IHTAKSQQVQKEKKGDKE-----IV-RKITAT-------------------ETTEMEH---KGKIQERVVDASELDDDGY 111 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~-----i~-~~~~~~-------------------~~~~~~~---~~~~~~L~i~~~~~~D~G~ 111 (283)
+.+|+.++|.|.+.+.+. .. .|.... .++.+.. ..+..+|.|.+++.+|+|.
T Consensus 7 ~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D~G~ 86 (222)
T 4i0k_A 7 ALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTDEGS 86 (222)
T ss_dssp CCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGGCSC
T ss_pred EECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccccCEE
Confidence 667889999999988752 11 333222 1222111 0125679999999999999
Q ss_pred EEEEEEecceeeeeeccCCCC---CCeEEecCCceeecCCCcEEEEEEE-eeecCCEEEEEeC-CEecCCCCCeEEEEe-
Q psy14060 112 YAITERKYYALSDLSEQKPAK---PPVFTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFRE-DFPITSSPDFQIHTF- 185 (283)
Q Consensus 112 Y~C~a~n~~~~~~~~~~~~~~---~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~~~W~k~-~~~~~~~~~~~~~~~- 185 (283)
|+|.+.+.........+.+.. +|.+...+ ...+..|+.+.|.|.+ .+.|.+.+.|+++ +..+...........
T Consensus 87 Y~C~~~~~~~~~~~~~l~V~~~~~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~~~~~~~~~~~~~ 165 (222)
T 4i0k_A 87 YTCFVSIQDFDSAAVSLQVAAPYSKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPLTGNVTTSQMANE 165 (222)
T ss_dssp EEEEEEECCCCCCCCCCCCCBCCCCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBCCSEEEEEEEECT
T ss_pred EEEEEEeCCCceEEEEEEEEcCCCCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccCCCCcceeEEcCC
Confidence 999999864433333444433 35544433 3467789999999999 7889999999994 444433222222211
Q ss_pred -CCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 186 -STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 186 -~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+....|.|.++..+|.|.|+|.+.|..|.....+.|.|..
T Consensus 166 ~~~~~~l~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~l~V~~ 206 (222)
T 4i0k_A 166 RGLFDVHSVLRVVLGANGTYSCLVRNPVLQQDAHGSVTITG 206 (222)
T ss_dssp TSCEEEEEEEEEECCTTCEEEEEEEETTTTEEEEEEEECCC
T ss_pred CCeEEEEEEEEEEeCCCCEEEEEEECCCCCCceEEEEEEeC
Confidence 2234578899999999999999999999999999988875
No 178
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.78 E-value=3.1e-18 Score=133.56 Aligned_cols=135 Identities=11% Similarity=0.080 Sum_probs=104.7
Q ss_pred cCCCcEEEEEEEeee-cCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 146 FEQDQARFEVEFDGD-PLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 146 ~~g~~v~l~C~~~g~-p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
..++.+.|.|.+.+. |.+.+.|+|++..+....++.+...+....|.|.++..+|+|.|+|.+.|..+.......+.+.
T Consensus 15 c~~~~~~l~C~~~~~~p~~~i~W~~~g~~i~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 15 STAEGIQLYSFVTYYVEDLKVNWSHNGSAIRYSDRVKTGVTGEQIWLQINEPTPNDKGKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp ECSSEEEEEEEBSSCCSSCEEEEEETTEECCCCSSEEEEEETTEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEEECHH
T ss_pred EcCceEEEEEEEeccCCCceEEEEECCEEccCCCeEEEEEeCCEEEEEECCCCcccCEEEEEEEecCCcceEEEEEEEEe
Confidence 356778899998875 5789999999999988888888888888889999999999999999999988887766666543
Q ss_pred eccCC----------CCCCCCCCeEE-ecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 225 EKRQG----------GRGGVVPPSFL-TTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 225 ~~~~~----------~~~~~~~p~~~-~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
..... .......|.+. ..+....+.+|+.+.|.|.+.|.|.|.+.|+++|..+...
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~~ 161 (212)
T 2r15_A 95 AYDEAYAEFQRLKQAAIAEKNRARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNEKALAQT 161 (212)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSCEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEETTEEECCC
T ss_pred eccchhhhccccCcccccccCCCcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEECCeECccC
Confidence 10000 00000123343 3455678999999999999999999999999999998754
No 179
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.78 E-value=4.7e-17 Score=143.85 Aligned_cols=131 Identities=15% Similarity=0.106 Sum_probs=85.9
Q ss_pred CceeecCCCcEEEEEEEeeecC--CEEEEEeCCEecCCCCCe-EEE--EeC---CEEEEEEcCCCCCCCEEEEEEEEeCC
Q psy14060 141 QPCRAFEQDQARFEVEFDGDPL--PTIKWFREDFPITSSPDF-QIH--TFS---TKSILIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g~p~--~~~~W~k~~~~~~~~~~~-~~~--~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
....+..|+.+.|.|.+.|..+ ..++|+|++..+...... ... ..+ ..+.|.|......|.|.|+|.|.|..
T Consensus 305 ~~~~~~~g~~~~L~C~v~g~~P~~~~i~W~k~g~~~~~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~g~y~C~a~n~~ 384 (512)
T 1zvo_C 305 AVQDLWLRDKATFTCFVVGSDLKDAHLTWEVAGKVPTGGVEEGLLERHSNGSQSQHSRLTLPRSLWNAGTSVTCTLNHPS 384 (512)
T ss_pred ChHHhccCCceEEEEEEeceECCCeEEEEEECCEeccCceeccceecCCCCeEEEEEEEEEchHHhcCCCeEEEEEEeCC
Confidence 3344667999999999988633 489999999876521100 011 111 12469999999999999999999987
Q ss_pred ceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEE-EEEEEEeeCCC--eeEEeeCCEEecC
Q psy14060 213 GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLAR-FDAKISATKPL--DVYWLKVSSLSDV 279 (283)
Q Consensus 213 g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~-L~C~~~g~p~~--~v~W~~~g~~l~~ 279 (283)
+... ...+...... ....+|.+...+... .|+.+. |.|.+.|.+++ .+.|++||+++..
T Consensus 385 ~~~~-~~~~~~~~~~----~~~~~p~v~~~~~~~---~~~~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~ 446 (512)
T 1zvo_C 385 LPPQ-RLMALREPAA----QAPVKLSLNLLASSD---PPEAASWLLCEVSGFSPPNILLMWLEDQREVNT 446 (512)
T ss_pred CCCC-ceeEEeecCC----CCCCCCEEEEEccCc---CCCCceEEEEEEeeeCCCCcEEEEEECCeECcC
Confidence 7543 3333221100 000356554433322 789999 99999996544 5899999998864
No 180
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.78 E-value=2.1e-18 Score=138.60 Aligned_cols=166 Identities=10% Similarity=0.031 Sum_probs=113.9
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|++++|.|.+.|.+ .+. |.. ...++.+... ....+|.|.+++.+
T Consensus 12 ~v~~G~~v~L~C~~~g~~~~~~~v~-W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 90 (253)
T 3uzq_A 12 LVKPGASVRLSCTASGFNIKDTYMS-WVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLSSLTSG 90 (253)
T ss_dssp EECTTCCEEEEEEECSSCGGGSCEE-EEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred eecCCCcEEEEEEeeCCcccCceEE-EEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeCCCCcc
Confidence 366788999999998843 221 111 1245555532 34788999999999
Q ss_pred CCeEEEEEEEeccee--eeeeccCCC---------------CCCeEEecCCceeecCCCcEEEEEEEeeecCC----EEE
Q psy14060 108 DDGYYAITERKYYAL--SDLSEQKPA---------------KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP----TIK 166 (283)
Q Consensus 108 D~G~Y~C~a~n~~~~--~~~~~~~~~---------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~----~~~ 166 (283)
|+|.|+|.+.|..+. .....+.+. .+|.+...+....+.+|++++|.|.+.+.+.+ .+.
T Consensus 91 DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~ 170 (253)
T 3uzq_A 91 DTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRYGNSFMH 170 (253)
T ss_dssp GCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEETTEECEE
T ss_pred cCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEE
Confidence 999999999885432 111122222 35667777777899999999999999987766 899
Q ss_pred EEeC--CEecC------------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeE-EEEEEEEEe
Q psy14060 167 WFRE--DFPIT------------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVVEE 225 (283)
Q Consensus 167 W~k~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~ 225 (283)
|||+ +..+. ...++..........|.|.++..+|+|.|+|.+.|..+..- .-..|.|..
T Consensus 171 W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~ 244 (253)
T 3uzq_A 171 WYQQKAGQPPKLLIYRASNLESGIPARFSGSGSRTDFTLTINPVEADDVATYFCQRSNEVPWTFGGGTKLEIKR 244 (253)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCCBCCCEEEEECC
T ss_pred EEEECCCCCCEEEEEEccccCCccCCceEEeCCCCEEEEEECCCCHHHCEEEEEEEccCCCcEECCCEEEEEcC
Confidence 9984 22111 12355555566677899999999999999999998654322 224566654
No 181
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.78 E-value=1.2e-17 Score=136.49 Aligned_cols=165 Identities=10% Similarity=0.075 Sum_probs=114.3
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEE--cCCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEH--KGKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~--~~~~~~L~i~~~~~~ 107 (283)
.+.+|++|+|.|.+.|.+ .+. |.. ...++.+.. .+...+|.|.+++.+
T Consensus 37 ~v~~G~~v~L~C~~~g~~~~~~~v~-W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 115 (282)
T 1qok_A 37 LVRSGTSVKLSCTASGFNIKDSYMH-WLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQLSSLTSE 115 (282)
T ss_dssp EEETTCCEEEEEEEESSCGGGSCEE-EEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEeCCCeEEEEEeccCCCCCCceEE-EEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEECcCChh
Confidence 467788999999998874 232 211 124555554 345789999999999
Q ss_pred CCeEEEEEEEecce------eeeeeccCCC---------------CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEE
Q psy14060 108 DDGYYAITERKYYA------LSDLSEQKPA---------------KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIK 166 (283)
Q Consensus 108 D~G~Y~C~a~n~~~------~~~~~~~~~~---------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~ 166 (283)
|+|.|.|.+.|..+ ......+.+. .++.+...+....+.+|++++|.|.+.+.+ +.+.
T Consensus 116 DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~ 194 (282)
T 1qok_A 116 DTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSSV-SYMH 194 (282)
T ss_dssp GCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSCC-SCCE
T ss_pred hCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCCC-ceEE
Confidence 99999999998753 1111122222 234455566677899999999999999988 8999
Q ss_pred EEe--CCEecC------------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCcee-EEEEEEEEEe
Q psy14060 167 WFR--EDFPIT------------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA-KCSANLVVEE 225 (283)
Q Consensus 167 W~k--~~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~ 225 (283)
||| ++..+. ...++.+.......+|.|.++..+|+|.|+|.+.|..... .....|.|..
T Consensus 195 W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~ 268 (282)
T 1qok_A 195 WFQQKPGTSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISRMEAEDAATYYCQQRSSYPLTFGAGTKLELKR 268 (282)
T ss_dssp EEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred EEEECCCCCcEEEEEEecCCCCcccCCeEEecCCCEEEEEEccCChhHCEEEEEEEeeCCCceEeCCEEEEEec
Confidence 999 554331 1345666555667789999999999999999998754322 2224555543
No 182
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.78 E-value=3.3e-18 Score=136.03 Aligned_cols=153 Identities=8% Similarity=0.066 Sum_probs=103.5
Q ss_pred eeeecCcEEEEEEEccCccce-EEeec-----------------------CCCEEEEE-cCCEEEEEEccCCCCCCeEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITA-----------------------TETTEMEH-KGKIQERVVDASELDDDGYYA 113 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~-----------------------~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~ 113 (283)
.+.+|+.++|.|. .+.+... .|... ..++.+.. .....+|.|.+++.+|+|.|+
T Consensus 11 ~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 89 (238)
T 2p1y_A 11 VAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELATPSQTSVYF 89 (238)
T ss_dssp EEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCCGGGCEEEE
T ss_pred EEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCCcccCeeEE
Confidence 3677889999999 6666222 22221 23555443 234568999999999999999
Q ss_pred EEEEeccee------eeeeccCCCCCC------------eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCE---
Q psy14060 114 ITERKYYAL------SDLSEQKPAKPP------------VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDF--- 172 (283)
Q Consensus 114 C~a~n~~~~------~~~~~~~~~~~p------------~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~--- 172 (283)
|.+.|..+. .....+.+...+ .+...+....+.+|+++.|.|.+.+.|.+.+.|+|++.
T Consensus 90 C~~~~~~g~~~~~~~~~~~~l~V~~~~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~ 169 (238)
T 2p1y_A 90 CASGDLGQTNERLFFGHGTKLSVLGSADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEG 169 (238)
T ss_dssp EEEEC------CEEECCCEEEEEECCCHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSC
T ss_pred EEEEeCCCccccceeCCCeEEEEeccCCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCC
Confidence 999987431 111122222221 45556677789999999999999998899999999641
Q ss_pred --ec---------CCCCCeEEEE--eCCEEEEEEcCCCCCCCEEEEEEEEeCC
Q psy14060 173 --PI---------TSSPDFQIHT--FSTKSILIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 173 --~~---------~~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
.+ ....++.+.. .....+|.|.++..+|+|.|+|.+.|..
T Consensus 170 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~ 222 (238)
T 2p1y_A 170 PALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDSATYFCAAIDTN 222 (238)
T ss_dssp CEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGGCEEEEEEEEETT
T ss_pred CEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHHCEEEEEEEeeCC
Confidence 11 0123444432 2335689999999999999999999974
No 183
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.78 E-value=5.5e-19 Score=143.02 Aligned_cols=183 Identities=9% Similarity=0.034 Sum_probs=108.3
Q ss_pred eeeecCcEEEEEEEc---cCccce-EEeecC------------------------CCEEEE--EcCCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKK---GDKEIV-RKITAT------------------------ETTEME--HKGKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~---g~~~i~-~~~~~~------------------------~~~~~~--~~~~~~~L~i~~~~~~D 108 (283)
.+.+|+.++|.|.+. +.+... .|.... .++.+. .......|.|.+++.+|
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 95 (268)
T 3mj6_A 16 RVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQDVQKAD 95 (268)
T ss_dssp EEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECSCCGGG
T ss_pred EEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECCCCHhH
Confidence 367788999999997 555222 222211 233221 11223679999999999
Q ss_pred CeEEEEEEEeccee---eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEE---eeecCCEEEEEeCCEe-cCC-----
Q psy14060 109 DGYYAITERKYYAL---SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEF---DGDPLPTIKWFREDFP-ITS----- 176 (283)
Q Consensus 109 ~G~Y~C~a~n~~~~---~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~---~g~p~~~~~W~k~~~~-~~~----- 176 (283)
+|.|+|.+.|..+. .....+.+. + ..+....+..|+.+.|.|.+ .+.|.+.+.|++++.. ...
T Consensus 96 ~G~Y~C~~~~~~~~~~~~~~~~l~V~--~---~~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~ 170 (268)
T 3mj6_A 96 EGIYTCEIRLKNESMVMKKPVELWVL--P---EEPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLS 170 (268)
T ss_dssp CEEEEEEEEETTCCCEEEEEEEEEEE--C---CCCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEE
T ss_pred CEEEEEEEEecCCcceEEEEEEEEEe--c---cCCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEE
Confidence 99999999987542 112222221 1 12345778899999999999 5668899999994321 110
Q ss_pred ------------CC----CeEEEE--eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCe
Q psy14060 177 ------------SP----DFQIHT--FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPS 238 (283)
Q Consensus 177 ------------~~----~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~ 238 (283)
.. +..+.. ......|.|.++..+|+|.|+|.|.|..|.....+.|.|.. .+|.
T Consensus 171 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~---------~~p~ 241 (268)
T 3mj6_A 171 YDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSIKLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ---------DEFQ 241 (268)
T ss_dssp EETTSSSCEEECSSTTTTTEEECSCGGGTBCCEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC---------C---
T ss_pred ecCCCCccccccccccccceEeeccCCCCeEEEEECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc---------CCCe
Confidence 00 111100 12345799999999999999999999999988888998865 4677
Q ss_pred EEecCCceEEcCCCeEE
Q psy14060 239 FLTTISSAVINVGQLAR 255 (283)
Q Consensus 239 ~~~~~~~~~v~~g~~v~ 255 (283)
+...+....+..|+.+.
T Consensus 242 ~~~~p~~~~~~~~q~~~ 258 (268)
T 3mj6_A 242 RTISPTPPTDKGQQGIL 258 (268)
T ss_dssp -----------------
T ss_pred eeeCCCCCCCCcceecc
Confidence 77777666666666544
No 184
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.78 E-value=1.7e-17 Score=133.46 Aligned_cols=177 Identities=11% Similarity=0.043 Sum_probs=122.1
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEE-ccCccce-EEeecCCCEEEEEcCCEE
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEK-KGDKEIV-RKITATETTEMEHKGKIQ 97 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~-~g~~~i~-~~~~~~~~~~~~~~~~~~ 97 (283)
.+.|.|.|..+.. ...|.|...+. ........+.+|+.+.|.|.+ .+.|... .|...+....... ...
T Consensus 62 ~Y~C~~~~~~~s~--~~~l~v~~~~~------~~~~~~~~~~~g~~v~l~C~~~~~~p~~~v~W~~~g~~~~~~~--~~~ 131 (262)
T 3rjd_A 62 EYRCQRGLSGRSD--PIQLEIHRGWL------LLQVSSRVFTEGEPLALRCHAWKDKLVYNVLYYRNGKAFKFFH--WNS 131 (262)
T ss_dssp EEEEEESSSCCCC--CEEEEEECSSE------EEEESCSEEETTSCEEEEEEEGGGCCCEEEEEEETTEEEEEEE--ECC
T ss_pred EEEEEEecCCccc--cEEEEEeccce------EecCCCeEEecCCeEEEEEEccCCCCCceEEEEECCccccccC--CCC
Confidence 4678888876543 55666665421 112223346788899999999 5666333 5554444333322 245
Q ss_pred EEEEccCCCCCCeEEEEEEEeccee-eeeeccCCC---CCCeEEecCCceeecCCCcEEEEEEEeeecC-CE----EEEE
Q psy14060 98 ERVVDASELDDDGYYAITERKYYAL-SDLSEQKPA---KPPVFTKKIQPCRAFEQDQARFEVEFDGDPL-PT----IKWF 168 (283)
Q Consensus 98 ~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~---~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~-~~----~~W~ 168 (283)
.|.|.+++.+|+|.|+|.+.|..+. .....+.+. .+|.+...+ ...+..|+.+.|.|.+.+.|. +. +.|+
T Consensus 132 ~l~i~~~~~~d~G~Y~C~~~n~~~~~~~~~~l~V~~~~~~p~~~~~~-~~~~~~g~~~~l~C~~~~~p~~p~~~~~~~w~ 210 (262)
T 3rjd_A 132 NLTILKTNISHNGTYHCSGMGKHRYTSAGISVTVKELFPAPVLNASV-TSPLLEGNLVTLSCETKLLLQRPGLQLYFSFY 210 (262)
T ss_dssp CEEESSCCGGGCEEEEEEEESSSEEEEECEEEEEECSSCCCEEEESS-CSSEETTCCEEEEEECCCCCC-----EEEEEE
T ss_pred eEEEEECChhhCEEEEEEEeCCCCccccceEEEeccCCCCCeEeecC-ceeecCCCeEEEEeEcccCCCCCCccEEEEEE
Confidence 7899999999999999999998763 222222222 355555444 566889999999999998775 43 7899
Q ss_pred eCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCcee
Q psy14060 169 REDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 169 k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
+++..+... .....|.|.++..+|+|.|+|.|.|..|..
T Consensus 211 ~~~~~~~~~--------~~~~~L~i~~v~~~d~G~Y~C~a~n~~G~~ 249 (262)
T 3rjd_A 211 MGSKTLRGR--------NTSSEYQILTARREDSGLYWCEAATEDGNV 249 (262)
T ss_dssp ETTEEEEEE--------ESCCEEEESSCCGGGCEEEEEEEEETTSSC
T ss_pred eCCcEeccc--------CCCceEEEEEechhhCeEEEEEEEcccCce
Confidence 998876421 233469999999999999999999999864
No 185
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.78 E-value=4e-18 Score=136.65 Aligned_cols=151 Identities=9% Similarity=0.037 Sum_probs=105.7
Q ss_pred eeecCcEEEEEEEccCccce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEe
Q psy14060 60 IHTAKSQQVQKEKKGDKEIV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAITERK 118 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 118 (283)
+.+|+.++|.|.+.+.+... .|.. ...++.....+...+|.|.+++.+|+|.|+|.+.|
T Consensus 16 v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~n 95 (250)
T 3esu_F 16 ASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQEDIGTYFCQQGN 95 (250)
T ss_dssp ECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECS
T ss_pred eeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhhCEEEEEEEee
Confidence 56788999999999887222 2222 13566666667788999999999999999999988
Q ss_pred ccee--eeeeccCCC-------------------CCCeEEecCCceeecCCCcEEEEEEEeeec--CCEEEEEeC--CEe
Q psy14060 119 YYAL--SDLSEQKPA-------------------KPPVFTKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRE--DFP 173 (283)
Q Consensus 119 ~~~~--~~~~~~~~~-------------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~--~~~ 173 (283)
..+. .....+.+. .++.+...+....+.+|+++.|.|.+.+.+ .+.+.|||+ +..
T Consensus 96 ~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~ 175 (250)
T 3esu_F 96 TLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQG 175 (250)
T ss_dssp SSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSC
T ss_pred CCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCC
Confidence 6441 111122222 123344455667889999999999998866 789999997 332
Q ss_pred cC-----------------CCCCeEEEEe--CCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 174 IT-----------------SSPDFQIHTF--STKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 174 ~~-----------------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
+. ...++.+... ....+|.|.++..+|+|.|+|.+.+
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 176 PEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSSLTSVDSAVYFCARSG 231 (250)
T ss_dssp CEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEC
T ss_pred cEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECCCCcccCEEEEEEEec
Confidence 21 0134544433 4456799999999999999999987
No 186
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.78 E-value=3.6e-20 Score=155.17 Aligned_cols=200 Identities=14% Similarity=0.091 Sum_probs=137.9
Q ss_pred ceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEE-----EccCccce-EE------eecC-C
Q psy14060 20 LKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKE-----KKGDKEIV-RK------ITAT-E 86 (283)
Q Consensus 20 ~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~-----~~g~~~i~-~~------~~~~-~ 86 (283)
.+.|.|.|..|..+....|.|...+.... +.. ... ..+.+|+.+.|.|. +.|.|... .| +... .
T Consensus 95 ~Y~C~~~n~~g~~~~~~~l~V~~~~~~~~-~~~-~~~-~~~~~g~~v~l~C~~~~~~~~g~p~~~v~W~k~g~~~~~~~~ 171 (339)
T 3o4o_C 95 TYVCTTRNASYCDKMSIELRVFENTDAFL-PFI-SYP-QILTLSTSGVLVCPDLSEFTRDKTDVKIQWYKDSLLLDKDNE 171 (339)
T ss_dssp EEECCEEETTEEEEEEEEEEEECSCGGGH-HHH-CEE-EEEETTSCEEEECCSCTTTCCSSSCCCBCCEESSCBCCTTCS
T ss_pred EEEEEEECCcceEEEEEEEEEEcCCCccc-ccc-ccc-eEEECCCCEEEEecCCcccccCCCCceEEEecCCeeCCCCCc
Confidence 46789999999999999999988653210 111 111 24778899999999 67776322 22 2222 3
Q ss_pred CEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-----eeeeccCC-----CCCCeEEecCCceeecCCCcEEEEEE
Q psy14060 87 TTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-----SDLSEQKP-----AKPPVFTKKIQPCRAFEQDQARFEVE 156 (283)
Q Consensus 87 ~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-----~~~~~~~~-----~~~p~~~~~~~~~~~~~g~~v~l~C~ 156 (283)
++.... ....|.|.+++.+|+|.|+|.+.|..+. .....+.+ ..+|.+...+....+..|+.+.|.|.
T Consensus 172 ~~~~~~--~~~~L~i~~v~~~d~G~Y~C~a~n~~g~~~~~~~~~~~l~V~~~~~~~~P~i~~~~~~~~v~~G~~v~L~C~ 249 (339)
T 3o4o_C 172 KFLSVR--GTTHLLVHDVALEDAGYYRCVLTFAHEGQQYNITRSIELRIKKKKEETIPVIISPLKTISASLGSRLTIPCK 249 (339)
T ss_dssp SEEECT--TSSEEEESSCCGGGCEEEEEEEECCBTTBCCEEEEEEEEEEECCCCCCCCEECCCSCCCCCCCCSCCCCCCC
T ss_pred eeEEcC--CcceEEEcccCHhhCeEEEEEEEECCCCeEEEEEEEEEEEEEcCCCCCCCEEecCCceeEeccCCCEEEEEE
Confidence 333322 2348999999999999999999987652 22222222 23667776667778899999999999
Q ss_pred E---eeec-CCEEEEEeCCEecCCC---------CCeEEEEeCC---EEEEEEcCCCCCCC-EEEEEEEEeCCceeEEEE
Q psy14060 157 F---DGDP-LPTIKWFREDFPITSS---------PDFQIHTFST---KSILIMRQVFMEDS-GVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 157 ~---~g~p-~~~~~W~k~~~~~~~~---------~~~~~~~~~~---~~~l~i~~~~~~d~-G~Y~C~a~n~~g~~~~~~ 219 (283)
+ .|.| .+.+.|++++..+... .++.+...+. ...|.|.++..+|. |.|+|.|.|..|.....+
T Consensus 250 ~~~~~g~P~~~~v~W~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~L~i~~v~~~d~~G~Y~C~a~N~~G~~~~~~ 329 (339)
T 3o4o_C 250 VFLGTGTPLTTMLWWTANDTHIESAYPGGRVTEGPRQEYSENNENYIEVPLIFDPVTREDLHMDFKCVVHNTLSFQTLRT 329 (339)
T ss_dssp EEESSSCCSSCEEEEESSSSCSSSSSCSSSCEECCCEECCCSSSCEEEECCEECSSCCCSCCCCCEEEEEETTEEECCBC
T ss_pred EECCCCCCCCceEEEEECCeecccccccccceecceEEecccCceEEEEEEEEEEechhhcCccEEEEEEeccCceEEEE
Confidence 9 8888 7899999998876421 1121211221 12699999999997 999999999999988766
Q ss_pred EEEEE
Q psy14060 220 NLVVE 224 (283)
Q Consensus 220 ~l~v~ 224 (283)
.+.+.
T Consensus 330 ~~~~~ 334 (339)
T 3o4o_C 330 TVKEH 334 (339)
T ss_dssp CCCC-
T ss_pred EhhHh
Confidence 65443
No 187
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.78 E-value=1.2e-17 Score=134.31 Aligned_cols=153 Identities=10% Similarity=0.048 Sum_probs=105.3
Q ss_pred eeeecCcEEEEEEEccC--c--cceEEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGD--K--EIVRKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAI 114 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~--~--~i~~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 114 (283)
.+.+|++++|.|.+.+. + .+ .|.. ...++.....+...+|.|.+++.+|+|.|+|
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C 91 (256)
T 3ux9_B 13 SGAPGQRVTISCSGSSSNIGSNYV-SWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEADYYC 91 (256)
T ss_dssp EECTTCCEEEEEECCTTTTTTSCC-EEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EEcCCCcEEEEEecCCCCCCCceE-EEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEEEEE
Confidence 46778899999999876 3 22 2221 2346776666678899999999999999999
Q ss_pred EEEecce----eeeeeccCCCCCC--------------------eEEecCCceeecCCCcEEEEEEEeeec--CCEEEEE
Q psy14060 115 TERKYYA----LSDLSEQKPAKPP--------------------VFTKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWF 168 (283)
Q Consensus 115 ~a~n~~~----~~~~~~~~~~~~p--------------------~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~ 168 (283)
.+.+..+ ......+.+..++ ..+..+....+.+|++++|.|.+.+.+ .+.+.||
T Consensus 92 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~ 171 (256)
T 3ux9_B 92 QVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLVESGGGLVQPGGSLRLSCAASGFTFSSYAMSWV 171 (256)
T ss_dssp EEEETTTTEEEECCCEEEEEC----------------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred EEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEEcCCCeEEcCCCeEEEEEEEeCCcccccEEEEE
Confidence 9988532 1111222222221 122333445688999999999998866 7899999
Q ss_pred eC--CEec------C-----------CCCCeEEEEe--CCEEEEEEcCCCCCCCEEEEEEEEeCC
Q psy14060 169 RE--DFPI------T-----------SSPDFQIHTF--STKSILIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 169 k~--~~~~------~-----------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
|+ +..+ . ...++.+... ....+|.|.++..+|+|.|+|.+.|..
T Consensus 172 r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 236 (256)
T 3ux9_B 172 RQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLRAEDTAVYYCARYIDF 236 (256)
T ss_dssp EECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEEETT
T ss_pred EECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCChhhCEEEEEEEEcCC
Confidence 86 2211 1 1125555544 346679999999999999999999864
No 188
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.78 E-value=1.5e-17 Score=132.34 Aligned_cols=152 Identities=9% Similarity=0.015 Sum_probs=106.8
Q ss_pred eeeecCcEEEEEEEccCc----cce-EEeec--------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIV-RKITA--------------------TETTEMEHKGKIQERVVDASELDDDGYYA 113 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~-~~~~~--------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 113 (283)
.+.+|+.|+|.|.+.+.+ ... .|... ..++.+...+...+|.|.+++.+|+|.|+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 91 (240)
T 1moe_A 12 AVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVEADDVATYY 91 (240)
T ss_dssp EECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred EecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCChhhCEEEE
Confidence 366788999999999886 222 33221 24666665667789999999999999999
Q ss_pred EEEEeccee--eeeeccCCCC------CCeEEecCCceeecCCCcEEEEEEEeeec--CCEEEEEeC--CEecC------
Q psy14060 114 ITERKYYAL--SDLSEQKPAK------PPVFTKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRE--DFPIT------ 175 (283)
Q Consensus 114 C~a~n~~~~--~~~~~~~~~~------~p~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~--~~~~~------ 175 (283)
|.+.|..+. .....+.+.. ++.+...+....+..|+++.|.|.+.+.| .+.+.|+|+ +..+.
T Consensus 92 C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~ 171 (240)
T 1moe_A 92 CQQTNEDPYTFGGGTKLEIKGGGSGGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRID 171 (240)
T ss_dssp EEECSSSSCCBCCCEEEEECCCSCCCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEE
T ss_pred EEEccCCceeecCCEEEEEecCCCCCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEc
Confidence 999987432 1111222222 23345556777899999999999999876 468999995 22110
Q ss_pred -----------CCCCeEEEEe--CCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 176 -----------SSPDFQIHTF--STKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 176 -----------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
...++.+... ....+|.|.++..+|+|.|+|.+.+
T Consensus 172 ~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~ 219 (240)
T 1moe_A 172 PANGNSKYVPKFQGKATITADTSSNTAYLQLTSLTSEDTAVYYCAPFG 219 (240)
T ss_dssp TTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEECS
T ss_pred ccCCccccCccccccEEEEEcccCCEEEEEECcCCHHHCEEEEEEEEe
Confidence 1234555433 3457899999999999999999974
No 189
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.78 E-value=1.5e-17 Score=135.48 Aligned_cols=153 Identities=11% Similarity=0.006 Sum_probs=107.6
Q ss_pred eeeecCcEEEEEEEccCccce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|++++|.|.+.+.+... .|.. ...++.+...+....|.|.+++.+|+|.|+|.+.
T Consensus 23 ~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~ 102 (276)
T 3auv_A 23 SASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQH 102 (276)
T ss_dssp ECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCChhhCEEEEEEEe
Confidence 366788999999999887221 2221 1346666666677899999999999999999999
Q ss_pred eccee--eeeeccCCCC--------------CCeEEecCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Eec---
Q psy14060 118 KYYAL--SDLSEQKPAK--------------PPVFTKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FPI--- 174 (283)
Q Consensus 118 n~~~~--~~~~~~~~~~--------------~p~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~~--- 174 (283)
|..+. .....+.+.. ++.++..+....+..|+++.|.|.+.+.+ .+.+.|+|++ ..+
T Consensus 103 n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l 182 (276)
T 3auv_A 103 YTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWV 182 (276)
T ss_dssp SSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEE
T ss_pred cCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEE
Confidence 87432 1112222222 22334445677899999999999999865 5899999963 111
Q ss_pred --------------CCCCCeEEEEe--CCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 175 --------------TSSPDFQIHTF--STKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 175 --------------~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
....++.+... .....|.|.++..+|+|.|+|.+.|.
T Consensus 183 ~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 235 (276)
T 3auv_A 183 AGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSLRAEDTAVYYCARFVF 235 (276)
T ss_dssp EEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EEEeccCCccccccccCCcEEEEecCCCcEEEEEECCCChhHCEEEEEEEEcC
Confidence 01235555543 34568999999999999999999997
No 190
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.78 E-value=3.5e-19 Score=139.18 Aligned_cols=156 Identities=10% Similarity=0.070 Sum_probs=107.0
Q ss_pred eeeecCcEEEEEEEccCccce-EEeec--------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITA--------------------TETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~--------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|+.++|.|.+.+.+... .|... ..++.+...+....|.|.+++.+|+|.|+|.+.
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 89 (212)
T 1nfd_E 10 SVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYYCLSS 89 (212)
T ss_dssp EEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEEEEEE
T ss_pred EEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEEEEEE
Confidence 367788999999998876221 33221 356666666677899999999999999999999
Q ss_pred ec-c-e----eeeeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEecCCCCCe-EEEEeC
Q psy14060 118 KY-Y-A----LSDLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPITSSPDF-QIHTFS 186 (283)
Q Consensus 118 n~-~-~----~~~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~~~~~~-~~~~~~ 186 (283)
|. . . ......+ ....+|.+........+..|+.+.|.|.+.|. |. +.+.|++++..+...... ......
T Consensus 90 n~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~ 169 (212)
T 1nfd_E 90 YGDNNDLVFGSGTQLTVLRGPKSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDGVKTTKPSKQG 169 (212)
T ss_dssp ETTTTEEEECCCEEEEEECCCCBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSSCBCCCCBCSS
T ss_pred cccCcccccCCceEEEEccCCCCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCCeecCCceecC
Confidence 62 1 1 1111111 12346666654444455678999999999987 54 799999999887643210 000000
Q ss_pred ----CEEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 187 ----TKSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 187 ----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
..+.|.|.++..+|+|.|+|.|.|..+.
T Consensus 170 ~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~ 201 (212)
T 1nfd_E 170 QNYMTSSYLSLTADQWKSHNRVSCQVTHEGET 201 (212)
T ss_dssp SCEEEEEBCCEEHHHHHTCSCEEEEEECTTTT
T ss_pred CCceEEEEEEEchhhcCCCCeEEEEEEeCCce
Confidence 1235889999999999999999998754
No 191
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.78 E-value=2.5e-18 Score=134.72 Aligned_cols=157 Identities=10% Similarity=0.060 Sum_probs=105.3
Q ss_pred eeeecCcEEEEEEE-ccCc---cceEEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEE
Q psy14060 59 EIHTAKSQQVQKEK-KGDK---EIVRKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAI 114 (283)
Q Consensus 59 ~v~~g~~v~l~C~~-~g~~---~i~~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 114 (283)
.+.+|+.++|.|.+ .+.+ .+ .|.. ...++.+...+....|.|.+++.+|+|.|+|
T Consensus 11 ~v~~G~~v~L~C~v~~~~~~~~~v-~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C 89 (216)
T 2xzc_L 11 SAAPGQKVTISCSGSSSNIGNNYV-SWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEADYYC 89 (216)
T ss_dssp EECTTCCEEEEEECCTTTGGGSCC-EEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEEEEE
T ss_pred EecCCCeEEEEEEeecCCCCCCeE-EEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEEEEE
Confidence 36678899999995 4442 33 2322 1236666656678899999999999999999
Q ss_pred EEEecce---eee--eeccC-CCCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCCCe--EEEE
Q psy14060 115 TERKYYA---LSD--LSEQK-PAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSPDF--QIHT 184 (283)
Q Consensus 115 ~a~n~~~---~~~--~~~~~-~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~~~--~~~~ 184 (283)
.+.|..+ ... ...+. ...+|.+...........|+.+.|.|.+.|. |.+ .+.|+|++..+...... ....
T Consensus 90 ~~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~ 169 (216)
T 2xzc_L 90 GTWDSSLNPVFGGGTKLEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQD 169 (216)
T ss_dssp EEECTTSCEEEBCCEEEEECCCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCC
T ss_pred EEEeCCCcceECCCEEEEEcCCCCCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCCCeeEecCccc
Confidence 9998764 111 11222 2246666654333333468899999999984 554 89999999987653000 0000
Q ss_pred eC-----CEEEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 185 FS-----TKSILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 185 ~~-----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
.. ..+.|.|..+..+|.|.|+|.|.|......
T Consensus 170 ~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 206 (216)
T 2xzc_L 170 SKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 206 (216)
T ss_dssp TTTCCEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred CCCCCEEEEEEEEECHHHhCCCCcEEEEEEcCCCCCc
Confidence 01 123689999999999999999999875543
No 192
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.77 E-value=6.1e-18 Score=135.06 Aligned_cols=153 Identities=10% Similarity=0.048 Sum_probs=104.5
Q ss_pred eeeecCcEEEEEEEccCccce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|++++|.|.+.+.+... .|.. ...++.+...+....|.|.+++.+|+|.|.|.+.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (242)
T 2znx_A 12 SVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDFGMYFCQQS 91 (242)
T ss_dssp EECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHHCEEEEEeEe
Confidence 366788999999999886221 2221 1346666555667899999999999999999998
Q ss_pred eccee--eeeeccCCCCCC-------------eEEecCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Eec----
Q psy14060 118 KYYAL--SDLSEQKPAKPP-------------VFTKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FPI---- 174 (283)
Q Consensus 118 n~~~~--~~~~~~~~~~~p-------------~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~~---- 174 (283)
|..+. .....+.+..+| .....+....+.+|++++|.|.+.+.| .+.+.|+|++ ..+
T Consensus 92 n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~ 171 (242)
T 2znx_A 92 NSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMG 171 (242)
T ss_dssp SSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEE
T ss_pred cCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEE
Confidence 87431 111223332222 233333445689999999999998865 4789999852 221
Q ss_pred ---C---------CCCCeEEEEe--CCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 175 ---T---------SSPDFQIHTF--STKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 175 ---~---------~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
. ...++.+... ....+|.|.++..+|+|.|+|.+.|.
T Consensus 172 ~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~ 222 (242)
T 2znx_A 172 YVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTEDTATYYCANXDG 222 (242)
T ss_dssp EECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGGGCEEEEEEETTS
T ss_pred EEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcCcCEEEEEeccCC
Confidence 0 1234555432 34568999999999999999999874
No 193
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.77 E-value=3.9e-18 Score=128.48 Aligned_cols=152 Identities=8% Similarity=-0.051 Sum_probs=105.7
Q ss_pred CCceeeecCC-eeeecCcEEEEEEEccCc-cce-EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeee
Q psy14060 49 EPSASGVHGK-EIHTAKSQQVQKEKKGDK-EIV-RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSDL 125 (283)
Q Consensus 49 ~p~~~~~~~~-~v~~g~~v~l~C~~~g~~-~i~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~ 125 (283)
+|.+...+.. .+.+|+.+.|.|.+.+.| ... .|...+.... .....+.|.+++.+|+|.|+|.+.|..... .
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~----~~~~~~~~~~~~~~d~G~Y~C~~~~~~~s~-~ 78 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIP----THTQPSYRFKANNNDSGEYTCQTGQTSLSD-P 78 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECT----TCCSSEEEEECCGGGCEEEEEEETTSBCCC-C
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcc----cCccceEEEecccccCeEEEEEEeCCCceE-e
Confidence 4555544442 478899999999999976 222 4443322111 122345677899999999999998764432 2
Q ss_pred eccCCCCCCeEEecCCceeecCCCcEEEEEEEe-eecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEE
Q psy14060 126 SEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFD-GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVF 204 (283)
Q Consensus 126 ~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 204 (283)
..+.+..++.+.. .....+..|+.+.|.|.+. +.|.+.+.|++++..+.. ......|.|.++..+|+|.|
T Consensus 79 ~~l~v~~~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~--------~~~~~~L~i~~v~~~d~G~Y 149 (170)
T 3ry4_A 79 VHLTVLFEWLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF--------SHLDPTFSIPQANHSHSGDY 149 (170)
T ss_dssp EEEEEECCSEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE--------ESSCCEEEESSCCGGGCEEE
T ss_pred EEEEEECCceEec-CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc--------cCCCCeEEEEeccccCCEEE
Confidence 2334444454333 3456788999999999995 456689999999987542 12234699999999999999
Q ss_pred EEEEEeCCce
Q psy14060 205 AVIAENRGGK 214 (283)
Q Consensus 205 ~C~a~n~~g~ 214 (283)
+|.+.|..|.
T Consensus 150 ~C~a~n~~g~ 159 (170)
T 3ry4_A 150 HCTGNIGYTL 159 (170)
T ss_dssp EEEEEETTEE
T ss_pred EEEEEeCcCc
Confidence 9999999886
No 194
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.77 E-value=3.2e-18 Score=133.35 Aligned_cols=132 Identities=17% Similarity=0.278 Sum_probs=103.0
Q ss_pred CeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEec------------CCCCCeEEEEeCCEEEEEEcCCCCCCC
Q psy14060 134 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPI------------TSSPDFQIHTFSTKSILIMRQVFMEDS 201 (283)
Q Consensus 134 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 201 (283)
..+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++.+. . ..|.|.++..+|+
T Consensus 2 ~~v~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~--~~L~i~~v~~~D~ 77 (212)
T 1f97_A 2 GSVYTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS--S--SGITFSSVTRKDN 77 (212)
T ss_dssp CEEECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE--T--TEEEESCCCGGGC
T ss_pred ceEEecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee--c--eeEEEcccCcccC
Confidence 45566677788999999999999999899999999987552 112333332 2 5799999999999
Q ss_pred EEEEEEEEeCCc--eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEE-EEeeCCCeeEEeeCCE-Ee
Q psy14060 202 GVFAVIAENRGG--KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAK-ISATKPLDVYWLKVSS-LS 277 (283)
Q Consensus 202 G~Y~C~a~n~~g--~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~-~~g~p~~~v~W~~~g~-~l 277 (283)
|.|+|.+.|..| .....+.|.|.. +|.+...+....+.+|+.+.|.|. +.+.|.|.+.|+++|. .+
T Consensus 78 G~Y~C~~~~~~g~~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~~~l 147 (212)
T 1f97_A 78 GEYTCMVSEEGGQNYGEVSIHLTVLV----------PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISML 147 (212)
T ss_dssp EEEEEEEEETTSSSEEEEEEEEEEEB----------CCCCCEEECCSEEETTSCEEEEEECSCCBSCCEEEEEETTEESB
T ss_pred eEEEEEEEccCCCcccEEEEEEEEEc----------CCCCcccCCccccCCCCeEEEEEEcccCcCCCEEEEEeCCcccc
Confidence 999999999877 455667777774 444444444567899999999999 7899999999999999 66
Q ss_pred cC
Q psy14060 278 DV 279 (283)
Q Consensus 278 ~~ 279 (283)
..
T Consensus 148 ~~ 149 (212)
T 1f97_A 148 TA 149 (212)
T ss_dssp C-
T ss_pred cc
Confidence 54
No 195
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.77 E-value=1.7e-17 Score=132.80 Aligned_cols=153 Identities=8% Similarity=0.084 Sum_probs=104.9
Q ss_pred eeeecCcEEEEEEEccCc-----cce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEE
Q psy14060 59 EIHTAKSQQVQKEKKGDK-----EIV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYY 112 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-----~i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 112 (283)
.+.+|++++|.|.+.+.+ ... .|.. ...++.+...+....|.|.+++.+|+|.|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 91 (247)
T 1svz_A 12 PVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRVEAEDLGIY 91 (247)
T ss_dssp EECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCCCHHHCEEE
Confidence 366788999999998775 222 3322 13466665556778999999999999999
Q ss_pred EEEEEeccee--eeeeccCCCC-------------CCeEEecCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Ee
Q psy14060 113 AITERKYYAL--SDLSEQKPAK-------------PPVFTKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FP 173 (283)
Q Consensus 113 ~C~a~n~~~~--~~~~~~~~~~-------------~p~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~ 173 (283)
.|.+.|..+. .....+.+.. ++.....+....+..|++++|.|.+.+.+ .+.+.|||++ ..
T Consensus 92 ~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~ 171 (247)
T 1svz_A 92 YCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGD 171 (247)
T ss_dssp EEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCC
T ss_pred EEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCC
Confidence 9999887431 1112222222 22233444455689999999999998864 5789999963 11
Q ss_pred c------C-----------CCCCeEEEE--eCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 174 I------T-----------SSPDFQIHT--FSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 174 ~------~-----------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
+ . ...++.+.. ......|.|.++..+|+|.|+|.+.|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 228 (247)
T 1svz_A 172 LKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKNEDTATYFCVRDRH 228 (247)
T ss_dssp EEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEEG
T ss_pred cEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCChhHCEEEEEEEecc
Confidence 1 0 023455443 234568999999999999999999985
No 196
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.77 E-value=1.1e-17 Score=130.67 Aligned_cols=136 Identities=11% Similarity=0.023 Sum_probs=103.2
Q ss_pred EecCCceeecCCCcEEEEEEEeeecCCEEEEEeC--CEec----C--------CCCCeEEEEeCCEEEEEEcCCCCCCCE
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRE--DFPI----T--------SSPDFQIHTFSTKSILIMRQVFMEDSG 202 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~--~~~~----~--------~~~~~~~~~~~~~~~l~i~~~~~~d~G 202 (283)
...+ ...+.+|+.+.|.|.+.+.|.+.+.|+|. +... . ...++.+........|.|.++..+|+|
T Consensus 5 ~~~~-~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 83 (213)
T 3mj8_L 5 TQPP-LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSNSGNMATLTISKAQAGDEA 83 (213)
T ss_dssp BCCS-EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred EeCC-cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEecCCEEEEEECCCChhhCE
Confidence 3344 67889999999999999889999999982 2111 0 223566666677788999999999999
Q ss_pred EEEEEEEeCCc---eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeC-C-CeeEEeeCCEEe
Q psy14060 203 VFAVIAENRGG---KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATK-P-LDVYWLKVSSLS 277 (283)
Q Consensus 203 ~Y~C~a~n~~g---~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p-~-~~v~W~~~g~~l 277 (283)
.|+|.+.|..+ .......|.|.... ..+|.+...+....+..|+.++|.|.+.|.+ + +.+.|++||+.+
T Consensus 84 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l 157 (213)
T 3mj8_L 84 DYYCQSWDGTNSAWVFGSGTKVTVLGQP------NAAPSVTLFPPSSEELKTNQATLVCMINGFYPADVAVTWEADGTPI 157 (213)
T ss_dssp EEEEEEEETTTTEEEEBCCEEEEEECSC------CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred EEEEEeccCCcceeEEcCceEEEEeCCC------CCCCeEEccCCCcccccCCcEEEEEEeeceeCCCeEEEEEcCCccc
Confidence 99999999987 33445677776321 1367777666555566899999999999863 3 389999999988
Q ss_pred cC
Q psy14060 278 DV 279 (283)
Q Consensus 278 ~~ 279 (283)
..
T Consensus 158 ~~ 159 (213)
T 3mj8_L 158 TQ 159 (213)
T ss_dssp CT
T ss_pred CC
Confidence 64
No 197
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.77 E-value=8.4e-18 Score=133.42 Aligned_cols=158 Identities=9% Similarity=0.064 Sum_probs=110.0
Q ss_pred eeeecCcEEEEEEEccCccce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|++++|.|.+.+.+... .|.. ...++.....+...+|.|.+++.+|+|.|+|.+.
T Consensus 35 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 114 (237)
T 3sob_L 35 SASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQPEDFATYYCQQS 114 (237)
T ss_dssp EEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEC
T ss_pred EEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCChhhCeEEEEeec
Confidence 477789999999999886221 2222 1356666666678899999999999999999998
Q ss_pred ecce----e-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeee-c-CCEEEEEeCCEecCCCC-C-eEEEE--eC
Q psy14060 118 KYYA----L-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-P-LPTIKWFREDFPITSSP-D-FQIHT--FS 186 (283)
Q Consensus 118 n~~~----~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p-~~~~~W~k~~~~~~~~~-~-~~~~~--~~ 186 (283)
+..+ . ..+.......+|.+...........|+.+.|.|.+.+. | .+.+.|++++..+.... . ..... .+
T Consensus 115 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~g 194 (237)
T 3sob_L 115 YTTPPTFGQGTKVEIKRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQDSKDS 194 (237)
T ss_dssp SSSSCEECCCEEEEEECCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEECCSSEEEEECCCCTTTC
T ss_pred cCCceEEcCcEEEEEecCCCCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCCCCCCceeecccccccCCC
Confidence 7653 1 11221223556777665555555568899999999885 4 48999999999876421 0 00000 00
Q ss_pred ---CEEEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 187 ---TKSILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 187 ---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
..+.|.|.....+|.|.|+|.+.|......
T Consensus 195 ~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~~ 227 (237)
T 3sob_L 195 TYSLSSTLTLSKADYEKHKVYACEVTHQGLSSP 227 (237)
T ss_dssp CEEEEEEEEEEHHHHTTCCEEEEEEECTTCSSC
T ss_pred cEEEEEEEEEcHHHccCCCcEEEEEeeCCCCCc
Confidence 134688999999999999999999875443
No 198
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.77 E-value=2e-17 Score=133.24 Aligned_cols=154 Identities=9% Similarity=0.036 Sum_probs=108.2
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee------------------------cCCCEEEEE--cCCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT------------------------ATETTEMEH--KGKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~------------------------~~~~~~~~~--~~~~~~L~i~~~~~~D 108 (283)
.+.+|+.|+|.|.+.+.+ .+ .|.. ...++.+.. .....+|.|.+++.+|
T Consensus 19 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 97 (257)
T 3gkz_A 19 LVKPSQTLSLTCSVTGDSVTSGYW-SWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYLQLKSVSSED 97 (257)
T ss_dssp EECTTCCEEEEEEEEESCCSSCEE-EEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCcEEEEEEEEcccccceEE-EEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEEEECCCChhh
Confidence 477789999999998843 22 2211 123555543 2457789999999999
Q ss_pred CeEEEEEEEecc----e-eeeeeccCCC--------------CCCeEEecCCceeecCCCcEEEEEEEeeecCC-EEEEE
Q psy14060 109 DGYYAITERKYY----A-LSDLSEQKPA--------------KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP-TIKWF 168 (283)
Q Consensus 109 ~G~Y~C~a~n~~----~-~~~~~~~~~~--------------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~~~W~ 168 (283)
+|.|+|.+.|.. . ......+.+. .++.+...+....+.+|++++|.|.+.+.+.+ .+.|+
T Consensus 98 sG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~ 177 (257)
T 3gkz_A 98 TATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWY 177 (257)
T ss_dssp CEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEE
T ss_pred CEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEE
Confidence 999999999861 1 1111122222 23566666677889999999999999987777 89999
Q ss_pred eC--CEecC------------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCc
Q psy14060 169 RE--DFPIT------------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 169 k~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 213 (283)
|+ +..+. ...++.........+|.|.++..+|+|.|+|.+.+...
T Consensus 178 k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~ 236 (257)
T 3gkz_A 178 QQKPGSSPKLWIYSTSNLASGVPARFSGSGSGTSYSLTISSMEAEDAASYFCHQWSSFP 236 (257)
T ss_dssp EECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEECSSSS
T ss_pred EECCCCCcEEEEEEccccCCCcCCCEEEecCCCEEEEEECCCChHHCEEEEEEEccCCc
Confidence 84 22111 12455555566677899999999999999999987543
No 199
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.77 E-value=5.1e-18 Score=133.26 Aligned_cols=161 Identities=9% Similarity=0.033 Sum_probs=103.1
Q ss_pred eeeecCcEEEEEEEccCc--cce-EEeec-------------------------CCCEEEEEc--CCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK--EIV-RKITA-------------------------TETTEMEHK--GKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~--~i~-~~~~~-------------------------~~~~~~~~~--~~~~~L~i~~~~~~D 108 (283)
.+.+|++++|.|.+.|.+ ... .|... ..++.+... .+..+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 90 (219)
T 1c1e_H 11 LKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNLKNED 90 (219)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCCCccc
Confidence 366788999999999864 221 33221 234444432 346799999999999
Q ss_pred CeEEEEEEEecce-----eeeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCC
Q psy14060 109 DGYYAITERKYYA-----LSDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSS 177 (283)
Q Consensus 109 ~G~Y~C~a~n~~~-----~~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~ 177 (283)
+|.|+|.+.|..+ ......+.+ ..+|.+........+..|+.+.|.|.+.| +|.| .+.|++++..+...
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~ 170 (219)
T 1c1e_H 91 MATYFCARGTTIVRAMDYWGQGTSLTVSSAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 170 (219)
T ss_dssp CEEEEEEEEETTTTEEEEECCCEEEEECCCCCBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred CEEEEEEEeccCcccceeecCceEEEEecCCCCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEEEEeCCcccceE
Confidence 9999999998751 111112222 22455554443445678999999999998 7988 99999998764211
Q ss_pred CCeEEEEeCC---EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEE
Q psy14060 178 PDFQIHTFST---KSILIMRQVFMEDSGVFAVIAENRGGKAKCSAN 220 (283)
Q Consensus 178 ~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 220 (283)
........+. .+.|.|.... .|.|.|+|.|.|..+.......
T Consensus 171 ~~~~~~~~~~~~~~s~L~i~~~~-~d~g~Y~C~a~n~~~~~~~~~~ 215 (219)
T 1c1e_H 171 TFPAVLQSDLYTLSSSVTVPSSP-RPSETVTCNVAHPASSTKVDKK 215 (219)
T ss_dssp ECCCEESSSCEEEEEEEEEESSS-TTTSCCEEEEEEGGGTEEEEEE
T ss_pred ecCCcccCCeEEEEEEEEEeccc-CCCCEEEEEEEeCCCCccEEEe
Confidence 0000000111 2358885444 4669999999998877554443
No 200
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.77 E-value=3.9e-18 Score=132.90 Aligned_cols=140 Identities=21% Similarity=0.319 Sum_probs=107.9
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCC----eEEEE-eCCEE--EEEEcCCCCCCCEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPD----FQIHT-FSTKS--ILIMRQVFMEDSGVF 204 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~----~~~~~-~~~~~--~l~i~~~~~~d~G~Y 204 (283)
.+|.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+..... ..... .+... .|.|.++..+|+|.|
T Consensus 8 ~pp~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 87 (212)
T 2v9r_A 8 FPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEGVY 87 (212)
T ss_dssp EEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCTTCSEEECTTSCEEESSCCCCSSCCCSCEEE
T ss_pred CCcceecCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECCEEeeccccccccceEEecCCcEEEEEEEecCCCcccCeEE
Confidence 478888888889999999999999999999999999999988764321 11111 11111 244456789999999
Q ss_pred EEEEEeCCcee-EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEE-EeeCCCeeEEeeCCEEecCC
Q psy14060 205 AVIAENRGGKA-KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKI-SATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 205 ~C~a~n~~g~~-~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~-~g~p~~~v~W~~~g~~l~~~ 280 (283)
+|.+.|..|.. .....+.|.. .++.+...+....+..|+.+.|.|.+ .+.|.+.+.|+++|..+...
T Consensus 88 ~C~~~n~~g~~~~~~~~l~V~~---------~~~~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~l~~~ 156 (212)
T 2v9r_A 88 VCVARNYLGEAVSHDASLEVAI---------LRDDFRQNPSDVMVAVGEPAVMECQPPRGHPEPTISWKKDGSPLDDK 156 (212)
T ss_dssp EEEEEETTEEEECCCEEEEECE---------ECSSCSBCCCCEEEETTSCEEEECBCCCEESCCEEEEEETTEEECTT
T ss_pred EEEEECCCCceeecceEEEEEe---------ccccceeCCCceEecCCCcEEEEEecCCCCCCCEEEEEECCccCCCC
Confidence 99999998765 3356666654 24555555667789999999999998 89999999999999998753
No 201
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.76 E-value=5.8e-17 Score=125.80 Aligned_cols=127 Identities=16% Similarity=0.143 Sum_probs=94.7
Q ss_pred cCCce-eecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEE
Q psy14060 139 KIQPC-RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC 217 (283)
Q Consensus 139 ~~~~~-~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 217 (283)
.+... .+.+|+.+.|.|.+.|.|.|.+.|+++..... .......+....|.|.++..+|+|.|.|.|.|..+....
T Consensus 6 ~p~~~~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~~~---~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~~~ 82 (202)
T 1vca_A 6 TPESRYLAQIGDSVSLTCSTTGCESPFFSWRTQIDSPL---NGKVTNEGTTSTLTMNPVSFGNEHSYLCTATCESRKLEK 82 (202)
T ss_dssp ESSSEEEEETTSCEEEEEEEESCSSCEEEEEETTCCCC---SSEEEEETTEEEEEESSCCGGGCSEEEEEEEETTEEEEE
T ss_pred CCCCcEEEcCCCcEEEEEeecCCCCCeEEEECCCCCCc---cceEEEcCCccEEEECcCCHHHCEEEEEEEEECCceEee
Confidence 33443 44589999999999999999999998432111 112233445567999999999999999999999988877
Q ss_pred EEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCC---CeeEEeeCCEEec
Q psy14060 218 SANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP---LDVYWLKVSSLSD 278 (283)
Q Consensus 218 ~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~---~~v~W~~~g~~l~ 278 (283)
.+.|.|... |..+...+. ..+.+|+.++|.|.+.|.++ ++|.|+++|+.|.
T Consensus 83 ~~~l~V~~~---------p~~~~~~~~-~~~~~G~~~~L~C~~~~~~p~~~~~i~W~k~~~~l~ 136 (202)
T 1vca_A 83 GIQVEIYSF---------PKDPEIHLS-GPLEAGKPITVKCSVADVYPFDRLEIDLLKGDHLMK 136 (202)
T ss_dssp EEEEEEEBC---------CSCCEEEES-SCEETTSCEEEEEEEEEEBSGGGEEEEEEETTEEEE
T ss_pred EEEEEEEeC---------CCCCEeCCc-eEEcCCCCEEEEEEECCcCCCCCeEEEEEeCCeECc
Confidence 888888752 222222222 56889999999999998644 3799999999875
No 202
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.76 E-value=3.2e-18 Score=135.11 Aligned_cols=140 Identities=21% Similarity=0.339 Sum_probs=108.6
Q ss_pred CCeEEecC----CceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeE-EEEeCCEEEEEEcCCCCCCCEEEEEE
Q psy14060 133 PPVFTKKI----QPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQ-IHTFSTKSILIMRQVFMEDSGVFAVI 207 (283)
Q Consensus 133 ~p~~~~~~----~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~ 207 (283)
+|.|...+ ....+..|+.+.|.|.+.+.|.+.+.|++++..+.....+. .........|.|.++..+|+|.|+|.
T Consensus 15 ~P~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~ 94 (231)
T 3ojm_B 15 APYWTNTEKMEKRLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCV 94 (231)
T ss_dssp EEEESCGGGGCCSCEEEETTSCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEE
T ss_pred CCccccccccCceeEEEccCCCEEEEEecccCCCCeEEEEECCccccccccccceeeecCcceEEEecCCcccCEEEEEE
Confidence 56665444 66788999999999999999999999999999886543221 12222334799999999999999999
Q ss_pred EEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEEEEeeCCCeeEEee----CCEEec
Q psy14060 208 AENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKISATKPLDVYWLK----VSSLSD 278 (283)
Q Consensus 208 a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~----~g~~l~ 278 (283)
+.|..+.......+.|..... .+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ +|..+.
T Consensus 95 ~~n~~~~~~~~~~l~V~~~~~------~~p~~~~~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~ 164 (231)
T 3ojm_B 95 VENEYGSINHTYHLDVVERSR------HRPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYG 164 (231)
T ss_dssp EEETTEEEEEEEEEEEECCCC------CCCEECTTCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBC
T ss_pred EecccCcccccEEEEEEcCCC------CCCceeeccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCcccc
Confidence 999999888888888875321 1333333 2456788999999999999999999999999 776653
No 203
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.76 E-value=6.6e-19 Score=133.80 Aligned_cols=140 Identities=14% Similarity=0.096 Sum_probs=95.8
Q ss_pred eeecCcEEEEEEEcc--Cc--cceEEee----------------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEec
Q psy14060 60 IHTAKSQQVQKEKKG--DK--EIVRKIT----------------ATETTEMEHKGKIQERVVDASELDDDGYYAITERKY 119 (283)
Q Consensus 60 v~~g~~v~l~C~~~g--~~--~i~~~~~----------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~ 119 (283)
..+|+++.|.|...+ .+ .+ .|.. ...++.+... .+|.|.+++.+|+|.|+|.+.|.
T Consensus 8 ~~~G~~v~L~c~~~~~~~~~~~i-~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~---gsL~I~~v~~~D~G~Y~C~~~n~ 83 (176)
T 1hng_A 8 GALGHGINLNIPNFQMTDDIDEV-RWERGSTLVAEFKRKMKPFLKSGAFEILAN---GDLKIKNLTRDDSGTYNVTVYST 83 (176)
T ss_dssp EETTSCEEECCTTCCCCTTEEEE-EEEETTEEEEEEETTSCCEESSTTEEECTT---SCEEESSCCGGGCEEEEEEEEET
T ss_pred EEcCCcEEEcCCCCCcccccccE-EEEeCCceeEEEcCCCeecCCCCeEEECCC---CcEEEcccccccCEEEEEEEEeC
Confidence 456788999994332 22 33 2222 2334444322 24999999999999999999998
Q ss_pred ceee---eeeccCCCC---CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEE
Q psy14060 120 YALS---DLSEQKPAK---PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIM 193 (283)
Q Consensus 120 ~~~~---~~~~~~~~~---~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i 193 (283)
.+.. ....+.+.. +|.+. ..+..+.|.|.+.|.|.|.+.|++++..+....+ +.|
T Consensus 84 ~g~~~~~~~~~l~V~~~~~~p~i~--------~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~~~-----------~~i 144 (176)
T 1hng_A 84 NGTRILNKALDLRILEMVSKPMIY--------WECSNATLTCEVLEGTDVELKLYQGKEHLRSLRQ-----------KTM 144 (176)
T ss_dssp TCCEEEEEEEEEEEECCCCCCEEE--------EETTTTEEEEECSSCSSCEEEEEETTEEEEEESS-----------SEE
T ss_pred CCCEEEEEEEEEEEeCCCCCCEEE--------ecCCcEEEEEEecCCCCcEEEEEECCEECCCCCc-----------EEE
Confidence 7743 222333322 23322 2244689999999999999999999988754332 334
Q ss_pred cCCCCCCCEEEEEEEEeCCceeEEEEEEE
Q psy14060 194 RQVFMEDSGVFAVIAENRGGKAKCSANLV 222 (283)
Q Consensus 194 ~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 222 (283)
..+..+|.|.|+|.|.|..|...+.+.|.
T Consensus 145 ~~~~~~d~G~Y~C~a~N~~g~~~~~~~l~ 173 (176)
T 1hng_A 145 SYQWTNLRAPFKCKAVNRVSQESEMEVVN 173 (176)
T ss_dssp EEECSCCSSCEEEEEEETTEEEEEEECCC
T ss_pred EEEEccCCeEEEEEEEecCCCceeccccc
Confidence 45678999999999999999888776654
No 204
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.76 E-value=1.9e-17 Score=113.49 Aligned_cols=94 Identities=21% Similarity=0.348 Sum_probs=84.0
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC--CeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP--DFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
.||.|...+.+..+..|+.+.|.|.+.|.|.|.+.|+|++..+.... ++.+...+..++|.|.++..+|+|.|+|.|.
T Consensus 4 ~PP~i~~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~ 83 (100)
T 3knb_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEeCCCcEEEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEE
Confidence 46778777888899999999999999999999999999999987543 5777777788899999999999999999999
Q ss_pred eCCceeEEEEEEEEEe
Q psy14060 210 NRGGKAKCSANLVVEE 225 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~ 225 (283)
|..|.....+.|.|..
T Consensus 84 N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 84 NEFGSDSATVNIHIRS 99 (100)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred ECCCEEEEEEEEEEEE
Confidence 9999999989988863
No 205
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.75 E-value=1.1e-17 Score=133.03 Aligned_cols=142 Identities=20% Similarity=0.330 Sum_probs=109.0
Q ss_pred CCCeEEec----CCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCe-EEEEeCCEEEEEEcCCCCCCCEEEEE
Q psy14060 132 KPPVFTKK----IQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDF-QIHTFSTKSILIMRQVFMEDSGVFAV 206 (283)
Q Consensus 132 ~~p~~~~~----~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C 206 (283)
.+|.|... +....+..|+++.|.|.+.+.|.+.+.|++++..+...... ..........|.|.++..+|+|.|+|
T Consensus 10 ~~P~~~~p~~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 89 (241)
T 3grw_A 10 GAPYWTRPERMDKKLLAVPAANTVRFRCPAAGNPTPSISWLKNGREFRGEHRIGGIKLRHQQWSLVMESVVPSDRGNYTC 89 (241)
T ss_dssp -CCEESSGGGGSCCEEEEETTSEEEEECCEECSSCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEE
T ss_pred CCceeEcCCCCCCcceEEcCCCeEEEEEEecCCCCceeEEEECCcccCCCCcccceeeeccceEEEEEeCCcccCEEEEE
Confidence 35655543 34568899999999999999999999999999988653321 11222334579999999999999999
Q ss_pred EEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEEEEeeCCCeeEEee----CCEEecC
Q psy14060 207 IAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKISATKPLDVYWLK----VSSLSDV 279 (283)
Q Consensus 207 ~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~----~g~~l~~ 279 (283)
.+.|..+.......+.|..... .+|.+.. .+....+..|+.+.|.|.+.+.|.+.+.|++ +|..+..
T Consensus 90 ~~~~~~~~~~~~~~l~V~~~~~------~~~~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~ 161 (241)
T 3grw_A 90 VVENKFGSIRQTYTLDVLERSP------HRPILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGP 161 (241)
T ss_dssp EEEETTEEEEEEEEEEEECCCC------CCCEEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCT
T ss_pred EEeecCCceEEEEEEEEeccCC------CCceeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCC
Confidence 9999999888888888875311 1333333 4566788999999999999999999999999 7776644
No 206
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.75 E-value=2e-17 Score=129.15 Aligned_cols=138 Identities=12% Similarity=0.060 Sum_probs=102.8
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCE--ec----------C--CCCCeEEEEeCCEEEEEEcCCCCCCC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDF--PI----------T--SSPDFQIHTFSTKSILIMRQVFMEDS 201 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~--~~----------~--~~~~~~~~~~~~~~~l~i~~~~~~d~ 201 (283)
+...+....+..|+++.|.|.+.+.|.+.+.|+|++. .+ . ...++.+...+....|.|.++..+|+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~ 83 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETEDF 83 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEcCCCEEEEEECCCChhhC
Confidence 3445677889999999999999998888999998531 11 1 12466666666777899999999999
Q ss_pred EEEEEEEEeCCceeEE-EEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCC-eeEEeeCCEEec
Q psy14060 202 GVFAVIAENRGGKAKC-SANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPL-DVYWLKVSSLSD 278 (283)
Q Consensus 202 G~Y~C~a~n~~g~~~~-~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~-~v~W~~~g~~l~ 278 (283)
|.|+|.+.|..+.... ...|.|.... .+|.+...+....+..|+.+.|.|.+.| .|.+ .+.|++||+.+.
T Consensus 84 G~Y~C~~~~~~~~~~~~~~~l~V~~~~-------~~p~v~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~~~ 156 (213)
T 3d9a_L 84 GMYFCQQSNSWPYTFGGGTKLEIKRAD-------AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQ 156 (213)
T ss_dssp EEEEEEECSSSSCEECCCEEEEECCCC-------BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred EEEEEeeecCCcceeCCCEEEEEecCC-------CCceeEeECCChhhcCCCcEEEEEEEeeecCCceEEEEEcCCCcCc
Confidence 9999999998765332 2456665321 2677666544444558999999999988 5555 799999999886
Q ss_pred CC
Q psy14060 279 VK 280 (283)
Q Consensus 279 ~~ 280 (283)
..
T Consensus 157 ~~ 158 (213)
T 3d9a_L 157 NG 158 (213)
T ss_dssp TT
T ss_pred ce
Confidence 54
No 207
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.75 E-value=2.4e-17 Score=129.77 Aligned_cols=159 Identities=11% Similarity=0.099 Sum_probs=106.6
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee---------------------------cCCCEEEEEc--CCEEEEEEccCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT---------------------------ATETTEMEHK--GKIQERVVDASE 105 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~---------------------------~~~~~~~~~~--~~~~~L~i~~~~ 105 (283)
.+.+|++++|.|.+.+.+ .+ .|.. ...++.+... .....|.|.+++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 89 (222)
T 1q9r_B 11 LVQSGGSLRLSCATSGFTFTDYYM-SWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMNTLR 89 (222)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCE-EEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred eEcCCCEEEEEEEecCccCCCCcE-EEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEECcCC
Confidence 466788999999998754 22 2221 1245555432 347799999999
Q ss_pred CCCCeEEEEEEEecce--------eeeeeccC--CCCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEe
Q psy14060 106 LDDDGYYAITERKYYA--------LSDLSEQK--PAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFP 173 (283)
Q Consensus 106 ~~D~G~Y~C~a~n~~~--------~~~~~~~~--~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~ 173 (283)
.+|+|.|.|.+.+..+ ......+. ...+|.+........+..|+.+.|.|.+.|. |.| .+.|++++..
T Consensus 90 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~ 169 (222)
T 1q9r_B 90 AEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLS 169 (222)
T ss_dssp GGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSCCBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred cccCeEEEEEEeccCCcccceEeCCceEEEeccCCCCCCeEEEccccccccCCCcEEEEEEEccEECCCCEEEEecCCeE
Confidence 9999999999988542 11111222 1235655544433346689999999999986 888 9999999876
Q ss_pred cCCCCCeEEEEeCC----EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEE
Q psy14060 174 ITSSPDFQIHTFST----KSILIMRQVFMEDSGVFAVIAENRGGKAKCSAN 220 (283)
Q Consensus 174 ~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 220 (283)
+... ......... .+.|.|..+..+| |.|+|.|.|..+.......
T Consensus 170 ~~~~-~~~~~~~~~~~~~~s~L~i~~~~~~d-g~y~C~a~n~~~~~~~~~~ 218 (222)
T 1q9r_B 170 SGVH-TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKK 218 (222)
T ss_dssp TTEE-EEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEEE
T ss_pred cceE-eccccccCCcEEEEEEEEECchhcCC-CeEEEEEEccCCCCcEEEe
Confidence 5321 111111111 2368999999899 9999999999887654443
No 208
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.75 E-value=5.2e-18 Score=131.00 Aligned_cols=138 Identities=15% Similarity=0.162 Sum_probs=101.5
Q ss_pred cCCceeecCCCcEEEEEE-EeeecC-CEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 139 KIQPCRAFEQDQARFEVE-FDGDPL-PTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~-~~g~p~-~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
.+....+.+|+.+.|.|. +.+.|. +.+.|++++..+................|.|.++..+|+|.|+|.+.|..+...
T Consensus 14 ~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C~~~~~~~~~~ 93 (201)
T 3s97_C 14 ERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKS 93 (201)
T ss_dssp CCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBCCCSSSEEECTTTCCEEESSCCGGGCEEEEEEEEEGGGTEE
T ss_pred CCceEEEECCCCEEEeccccccCCCceEEEEEECCceeeeeeCCCeEEEcCCCeEEECcCCcccCeEEEEEEEecCCCcc
Confidence 446678999999999999 888898 999999998776432211122222334699999999999999999999776544
Q ss_pred EE---EEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecC
Q psy14060 217 CS---ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 217 ~~---~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~ 279 (283)
.. ..+.+.... .....+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+++|..+..
T Consensus 94 ~~~~~~~~~~~~~~---~~~~~~p~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~~~~ 156 (201)
T 3s97_C 94 VFSKFIPLIPIPER---TTKPYPADIVVQFKDVYALMGQNVTLECFALGNPVPDIRWRKVLEPMPS 156 (201)
T ss_dssp EECCCEEEEEECCS---SCCCEEEEEEEECCCEEEETTCCEEEEEEEEEESCCEEEEEETTBCCCT
T ss_pred hhhcccceeecccc---ccCCCCCceEecCCceEEecCCcEEEEEEccCCCCCceEEEeCCCcCCC
Confidence 32 333332110 0111356666666678899999999999999999999999999987653
No 209
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.75 E-value=1.1e-17 Score=132.12 Aligned_cols=152 Identities=14% Similarity=0.190 Sum_probs=104.5
Q ss_pred eeeecCcEEEEEEEccCcc-ce-EEeecCCC---------------E--EEE----------EcCCEEEEEEccCCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDKE-IV-RKITATET---------------T--EME----------HKGKIQERVVDASELDDD 109 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~-i~-~~~~~~~~---------------~--~~~----------~~~~~~~L~i~~~~~~D~ 109 (283)
.+.+|+.+.|.|.+.+.+. .. .|...... + ++. .. ....|.|.+++.+|+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-~~~~L~i~~v~~~D~ 89 (231)
T 2pet_A 11 EVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLD-SQGRLVLAEAQVGDE 89 (231)
T ss_dssp EEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEEC-TTCCEEESSCCGGGC
T ss_pred EEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccC-CCceEEEcccCcccC
Confidence 4677889999999998884 32 44422111 1 111 11 113399999999999
Q ss_pred eEEEEEEEecc-ee-eeeeccCC---CCCCeEEecCCceeecCCCcE-EEEEEE-eeecCCEEEEEeCCEecCCCC----
Q psy14060 110 GYYAITERKYY-AL-SDLSEQKP---AKPPVFTKKIQPCRAFEQDQA-RFEVEF-DGDPLPTIKWFREDFPITSSP---- 178 (283)
Q Consensus 110 G~Y~C~a~n~~-~~-~~~~~~~~---~~~p~~~~~~~~~~~~~g~~v-~l~C~~-~g~p~~~~~W~k~~~~~~~~~---- 178 (283)
|.|+|.+.+.. +. .....+.+ ...|.+...+....+..|+.+ .|.|.+ .+.|.|.+.|++++..+....
T Consensus 90 G~Y~C~~~~~~~~~~~~~~~l~V~~~p~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~~~~~~~~~~~~~ 169 (231)
T 2pet_A 90 RDYVCVVRAGAAGTAEATARLNVFAKPEATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRNGQRLEVPVEMNP 169 (231)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEEEBCCCCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEETTEECCCCSSCCS
T ss_pred ceEEEEEEecCCCceEEEEEEEEEecCCCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEECCccCcccccccc
Confidence 99999999886 42 22223333 234666666666677889887 999999 889999999999999887654
Q ss_pred CeEEEEeC----C-----EEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 179 DFQIHTFS----T-----KSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 179 ~~~~~~~~----~-----~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
++.+.... . .+.|.|......|.|.|+|.|.|.
T Consensus 170 ~~~~~~~~~~~~~g~~~~~~~L~i~~~~~dd~g~Y~C~a~n~ 211 (231)
T 2pet_A 170 EGYMTSRTVREASGLLSLTSTLYLRLRKDDRDASFHCAAHYS 211 (231)
T ss_dssp SEEEEEEEEECTTSCEEEEEEEEEECCGGGGGCEEEEEEEEE
T ss_pred ceeecceeEecCCCeEEEEEEEEEecchhhCCceEEEEEEcC
Confidence 44433211 1 156888766666799999999994
No 210
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.75 E-value=1.5e-17 Score=129.78 Aligned_cols=158 Identities=10% Similarity=0.065 Sum_probs=105.3
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee------------------------cCCCEEEEE--cCCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT------------------------ATETTEMEH--KGKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~------------------------~~~~~~~~~--~~~~~~L~i~~~~~~D 108 (283)
.+.+|++++|.|.+.|.+ .+ .|.. ...++.+.. .++..+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 89 (210)
T 3d9a_H 11 LVKPSQTLSLTCSVTGDSITSDYW-SWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTED 89 (210)
T ss_dssp EECTTSCEEEEEEEESSCGGGSCE-EEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EecCCCcEEEEEEEecccCCCCcE-EEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCCccc
Confidence 467788999999999864 23 2221 134565543 2346799999999999
Q ss_pred CeEEEEEEEecce--eeeeeccC--CCCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCCCeEE
Q psy14060 109 DGYYAITERKYYA--LSDLSEQK--PAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSPDFQI 182 (283)
Q Consensus 109 ~G~Y~C~a~n~~~--~~~~~~~~--~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~~~~~ 182 (283)
+|.|.|.+.|... ......+. ...+|.+........+..|+.+.|.|.+.|. |.| .+.|++++..+.......+
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~~~~~~~ 169 (210)
T 3d9a_H 90 TATYYCANWDGDYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVHTFPAV 169 (210)
T ss_dssp CEEEEEEETTSSCBCCCEEEEECCCCCBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECCCE
T ss_pred CEEEEEEEecCcccccceEEEeccCCCCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCcccceEEcCCc
Confidence 9999999988532 11111121 2235655544434456789999999999987 888 9999999875421111011
Q ss_pred EEeC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEE
Q psy14060 183 HTFS---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCS 218 (283)
Q Consensus 183 ~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 218 (283)
...+ ..+.|.|.....+| |.|+|.|.|..+.....
T Consensus 170 ~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 207 (210)
T 3d9a_H 170 LQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVD 207 (210)
T ss_dssp EETTEEEEEEEEEEEGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCCCcEEEEEEEEEcHHHcCC-CcEEEEEEeCCCCcccc
Confidence 1111 13468898888867 99999999998875543
No 211
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.75 E-value=4e-17 Score=127.50 Aligned_cols=139 Identities=14% Similarity=0.067 Sum_probs=104.3
Q ss_pred CeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC---Ee-----------cCCCCCeEEEEeCCEEEEEEcCCCCC
Q psy14060 134 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED---FP-----------ITSSPDFQIHTFSTKSILIMRQVFME 199 (283)
Q Consensus 134 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~---~~-----------~~~~~~~~~~~~~~~~~l~i~~~~~~ 199 (283)
|.+...+....+..|+.+.|.|.+.+.|.+.+.|||.. .. .....++.+.......+|.|.++..+
T Consensus 2 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 2 IQMTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSGSGRDSSFTISSLESE 81 (213)
T ss_dssp CCEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGG
T ss_pred CeeEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEeccCCEEEEEECCCCcc
Confidence 34555677788999999999999999888999999832 10 01134666666667778999999999
Q ss_pred CCEEEEEEEEeCCce-eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC--eeEEeeCCEE
Q psy14060 200 DSGVFAVIAENRGGK-AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL--DVYWLKVSSL 276 (283)
Q Consensus 200 d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~--~v~W~~~g~~ 276 (283)
|+|.|+|.+.|..+. ......|.|.... .+|.+...+....+..|+.+.|.|.+.|.+++ .+.|++||+.
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~-------~~p~v~~~~~~~~~~~~~~v~l~C~~~g~~p~~~~v~W~k~g~~ 154 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEIKRAD-------AKPTVSIFPPSSEQLGTGSATLVCFVNNFYPKDINVKWKVDGSE 154 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEECCCC-------BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCEEEEEEETTEE
T ss_pred cCEEEEEecccCCceEEcCCceEEEeccC-------CCceeeeeCCCceecCCCCcEEEEEEeeecCCceEEEEEECCcc
Confidence 999999999887543 2233456663211 46777776666666788899999999987653 8999999998
Q ss_pred ecC
Q psy14060 277 SDV 279 (283)
Q Consensus 277 l~~ 279 (283)
+..
T Consensus 155 l~~ 157 (213)
T 3r06_A 155 KRD 157 (213)
T ss_dssp ECT
T ss_pred cCC
Confidence 864
No 212
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.75 E-value=1.3e-17 Score=128.77 Aligned_cols=135 Identities=9% Similarity=0.002 Sum_probs=101.3
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.+...+.. .+..|++++|.|.+.+ +.+.+.|+|++..+..... ..........|.|.++..+|+|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPWDRQ-NPLEPKNKARFSIPSMTEDYAGRYRCYYRSP 80 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCSEEE-CCCSSSSEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCccccc-ccccCCceEEEEeccCCcccCceEEEEEeCC
Confidence 36777777666 8899999999999988 7889999999987643110 0011134568999999999999999999999
Q ss_pred Cce--eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 212 GGK--AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 212 ~g~--~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
.|. .+..+.|.|.... .+|.+...+.. .+.+|+.++|.|.+.+. .+.+.|+++|..+.
T Consensus 81 ~g~~~~s~~~~l~V~~~~-------~~p~~~~~~~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~ 140 (196)
T 3p2t_A 81 VGWSQPSDPLELVMTGAY-------SKPTLSALPSP-LVTSGKSVTLLCQSRSP-MDTFLLCKERAAHP 140 (196)
T ss_dssp TEEBCCCCCEEEEEECSS-------CCCEEEEESCS-EECTTCCEEEEEEEEEE-EEEEEEEETTCCCG
T ss_pred CcccCCCccEEEEecCCC-------CCCEEEeCCcc-eecCCCeEEEEEecCCC-CCEEEEEeCCCccc
Confidence 873 3445677776421 35666655443 78999999999999884 46899999998653
No 213
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.74 E-value=6e-18 Score=130.67 Aligned_cols=135 Identities=9% Similarity=0.005 Sum_probs=90.4
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.+...+.. .+.+|++++|.|.+.+.|. .+.|+|++..+..... ..........|.|.++..+|+|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~-~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (196)
T 2d3v_A 4 SKATLWAEPGS-VISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEPWDTQ-NPLEPKNKARFSIPSMTEHHAGRYRCYYYSP 80 (196)
T ss_dssp CBCEEEEESCS-EEETTCCEEEEEECCTTCC-EEEEEETTCSSCSEEE-CCCSSTTEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeCCCC-cccCCCeEEEEEeCCCCCc-EEEEEECCCCCCcccc-cccCCccccEEEeccCChhHCeEEEEEEeCC
Confidence 46777776664 7889999999999988654 9999999987643110 0001234568999999999999999999998
Q ss_pred Ccee--EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 212 GGKA--KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 212 ~g~~--~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
.+.. +..+.|.|.... .+|.+...+ ...+.+|+.++|.|.+.+.| +.+.|+|+|..+.
T Consensus 81 ~g~~~~s~~~~l~V~~~~-------~~p~i~~~~-~~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~~~~ 140 (196)
T 2d3v_A 81 AGWSEPSDPLELVVTGFY-------NKPTLSALP-SPVVTSGENVTLQCGSRLRF-DRFILTEEGDHKL 140 (196)
T ss_dssp TEECBCCCCEEEEEECSS-------CCCEEEC------------CEEEEEESSCC-SEEEEEEC---CC
T ss_pred CCcCCcCccEEEEecCCC-------CCCeEEccC-CccccCCCcEEEEEEcCCCC-CEEEEEccCCccc
Confidence 7643 344667776521 245655443 35788999999999999988 8999999998763
No 214
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.74 E-value=6.9e-18 Score=133.77 Aligned_cols=157 Identities=9% Similarity=0.089 Sum_probs=106.6
Q ss_pred eeeecCcEEEEEEEccCc-cc--eEEeec--------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EI--VRKITA--------------------TETTEMEHKGKIQERVVDASELDDDGYYAIT 115 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i--~~~~~~--------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 115 (283)
.+.+|++++|.|.+.|.+ .. ..|... ..++.....+....|.|.+++.+|+|.|+|.
T Consensus 30 ~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 109 (234)
T 2j6e_L 30 SGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEADYYCA 109 (234)
T ss_dssp CBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSEEEEE
T ss_pred EeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEEEEEE
Confidence 366788999999998754 21 133221 2456665556678999999999999999999
Q ss_pred EEecce----eeeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEecCCCCCe-EEEE
Q psy14060 116 ERKYYA----LSDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPITSSPDF-QIHT 184 (283)
Q Consensus 116 a~n~~~----~~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~~~~~~-~~~~ 184 (283)
+.|..+ ......+.+ ..+|.+...........|+.++|.|.+.|. |. +.++|+|++..+...... ....
T Consensus 110 ~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~~~~~~~~~ 189 (234)
T 2j6e_L 110 TWDDSLSAVIFGGGTKLTVLGQPKAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVKAGVETTKPSK 189 (234)
T ss_dssp EEETTTTEEEECCCBCCCBCCCCCCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECCSSEEECCCCC
T ss_pred EEcCCcceeEecCCEEEEEecCCCCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECCCCccccCceE
Confidence 998865 111223333 235555443333334468899999999885 44 489999999987543110 0000
Q ss_pred -e----CCEEEEEEcCCCCCCCEEEEEEEEeCCcee
Q psy14060 185 -F----STKSILIMRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 185 -~----~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
. ...+.|.|..+..+|.|.|+|.|.|.....
T Consensus 190 ~~~~~~~~~s~L~i~~~~~~d~G~Y~C~a~n~~~~~ 225 (234)
T 2j6e_L 190 QSNNKYAASSYLSLTPEQWKSHRSYSCQVTHEGSTV 225 (234)
T ss_dssp CTTSCCBCCEEECCCGGGTTTSCCEEEEEEBTTBCC
T ss_pred CCCCCEEEEEEEEECHHHcCCCCeEEEEEEeCCCce
Confidence 0 123468899999999999999999987653
No 215
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.74 E-value=3.4e-17 Score=127.70 Aligned_cols=134 Identities=10% Similarity=0.045 Sum_probs=99.4
Q ss_pred CCceeecCCCcEEEEEEEeeecCCEEEEEeCC--Eec------------CCCCCeEEEEeCCEEEEEEcCCCCCCCEEEE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FPI------------TSSPDFQIHTFSTKSILIMRQVFMEDSGVFA 205 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 205 (283)
+....+..|+.+.|.|.+.+.|.+.+.|||++ ..+ ....++.+...+....|.|.++..+|+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 86 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSGSGTDFTLTIDPVEADDTAIYF 86 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEecCCEEEEEECCCCHHHCeEEE
Confidence 66778999999999999999888899999842 211 1124566665666778999999999999999
Q ss_pred EEEEeCCceeEE-EEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeEEeeCCEEecCC
Q psy14060 206 VIAENRGGKAKC-SANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVYWLKVSSLSDVK 280 (283)
Q Consensus 206 C~a~n~~g~~~~-~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~~~g~~l~~~ 280 (283)
|.+.|..+.... ...|.|.... .+|.+...+....+..|+.++|.|.+.|. |.+ .|.|++||+.+...
T Consensus 87 C~~~~~~~~~~~~~~~l~V~~~~-------~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~~~~~ 157 (210)
T 1lk3_L 87 CQQSWNGPLTFGAGTKLELKRAD-------AAPTVSIFPPSTEQLATGGASVVCLMNNFYPRDISVKWKIDGTERRDG 157 (210)
T ss_dssp EEECSSSSCEECCCEEEEECCCC-------BCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEECCTT
T ss_pred EEEEcCCCceeCCCEEEEEcCCC-------cCCeEEEECCchhhccCCcEEEEEEEEeEeCCceEEEEEeCCccCCCC
Confidence 999998764322 2456665321 25666665444445589999999999984 444 89999999987643
No 216
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.74 E-value=5.3e-17 Score=130.70 Aligned_cols=166 Identities=10% Similarity=0.082 Sum_probs=109.6
Q ss_pred eeeecCcEEEEEEEccCccce-EEee---------------------cCCCEEE--EEcCCEEEEEEccCCCCCCeEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT---------------------ATETTEM--EHKGKIQERVVDASELDDDGYYAI 114 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~---------------------~~~~~~~--~~~~~~~~L~i~~~~~~D~G~Y~C 114 (283)
.+.+|+.++|.|.+.+.+... .|.. ...++.+ .......+|.|.+++.+|+|.|+|
T Consensus 14 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~DsG~Y~C 93 (256)
T 3tf7_C 14 TVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHRSDSAVYFC 93 (256)
T ss_dssp EEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCGGGCSEEEE
T ss_pred EecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCcccCEEEEE
Confidence 366788999999998877322 2221 1234444 233567889999999999999999
Q ss_pred EEEecce-----ee---eeeccC-----------------CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEe
Q psy14060 115 TERKYYA-----LS---DLSEQK-----------------PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFR 169 (283)
Q Consensus 115 ~a~n~~~-----~~---~~~~~~-----------------~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k 169 (283)
.+.|..+ .. .+.... ...+|.+...+....+.+|++++|.|.+.+. .+.+.|||
T Consensus 94 ~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k 172 (256)
T 3tf7_C 94 AVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS-HNYMYWYR 172 (256)
T ss_dssp EEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC-CSEEEEEE
T ss_pred EEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC-ceEEEEEE
Confidence 9988643 11 111111 2236677777788888899999999999885 78999998
Q ss_pred CCE--e---cC------------CCCCeEEEE-eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEE--EEEEEEEe
Q psy14060 170 EDF--P---IT------------SSPDFQIHT-FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC--SANLVVEE 225 (283)
Q Consensus 170 ~~~--~---~~------------~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~v~~ 225 (283)
... . +. ...++.+.. .....+|.|.++..+|+|.|+|.+.|..|...- -..|.|..
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~~ 248 (256)
T 3tf7_C 173 QDTGHELRLIYYSYGAGNLQIGDVPDGYKATRTTQEDFFLTLESASPSQTSLYFCASSDAPGQLYFGEGSKLTVLE 248 (256)
T ss_dssp ECTTSCEEEEEEEESTTCCEECSCCTTCEEECCSSSBCEEEESSCCGGGCEEEEEEEEEETTEEEECCCEEEEEEC
T ss_pred ECCCCCeEEEEEEcCCCceecCccCCceEEEeCCCCeEEEEECCCCHHHCEEEEEEecCCCCccEECCCeEEEEEc
Confidence 421 1 00 012233222 223457999999999999999999998765322 13455553
No 217
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.74 E-value=8.1e-19 Score=147.66 Aligned_cols=154 Identities=13% Similarity=0.089 Sum_probs=118.5
Q ss_pred CCeEEEEEEEecceeeeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCC
Q psy14060 108 DDGYYAITERKYYALSDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFST 187 (283)
Q Consensus 108 D~G~Y~C~a~n~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~ 187 (283)
|.|.|+|.+.+... ...+..-.+|.+...+....+.+|+.+.|.|.+.|.|.+.+.|++++..+..... ......
T Consensus 136 ~~~~~~C~~~~~l~---~l~~~~c~~P~i~~~~~~~~v~~G~~v~L~C~~~g~p~p~i~W~~~~~~~~~~~~--~~~~~~ 210 (347)
T 2ifg_A 136 PEQKLQCHGQGPLA---HMPNASCGVPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQSATVM--KSGGLP 210 (347)
T ss_dssp GGGCCCCSSSSCSS---CCCCTTCCCCEEEEECCSSCCBTTCCEEEEEEEECSSCCCCCEEESCCCSSEEEC--CCCCSS
T ss_pred cccCCCCCCChHHh---cCCcccCCCCceeccCCceEEeCCCcEEEEEEEecCCCCEEEEEcCCceeecccc--cceecc
Confidence 57899997766211 1122344588888888888999999999999999999999999999876432111 001234
Q ss_pred EEEEEEcCCCCCCCE-EEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC
Q psy14060 188 KSILIMRQVFMEDSG-VFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL 266 (283)
Q Consensus 188 ~~~l~i~~~~~~d~G-~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~ 266 (283)
..+|.|.++..+|+| .|+|.+.|..|.....+.+.|.. +|.+ . ...+..|+.+.|.|.+.|.|.|
T Consensus 211 ~~~L~i~~v~~~D~G~~Y~C~a~n~~g~~~~~~~l~V~~----------~P~i-~---~~~~~~g~~v~l~C~~~g~P~p 276 (347)
T 2ifg_A 211 SLGLTLANVTSDLNRKNVTCWAENDVGRAEVSVQVNVSF----------PASV-Q---LHTAVEMHHWCIPFSVDGQPAP 276 (347)
T ss_dssp EEEEEEESCCSTTTTCCEEECCEETTEECCEEECCCCBE----------EEEE-E---ECCCEESSSEEEEEEEEEESCC
T ss_pred cceEEEeeCChHHCCCeEEEEEEcCCCCEEEEEEEEEcC----------CCee-e---eccCccCceEEEEEEeeecCCC
Confidence 567999999999999 99999999999887777777764 4554 1 1224578999999999999999
Q ss_pred eeEEeeCCEEecCC
Q psy14060 267 DVYWLKVSSLSDVK 280 (283)
Q Consensus 267 ~v~W~~~g~~l~~~ 280 (283)
.|.|+++|+.+...
T Consensus 277 ~i~W~~~g~~l~~~ 290 (347)
T 2ifg_A 277 SLRWLFNGSVLNET 290 (347)
T ss_dssp EEEEEETTEECCCC
T ss_pred cEEEEeCCEECCCC
Confidence 99999999998743
No 218
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.74 E-value=5.3e-17 Score=133.24 Aligned_cols=154 Identities=9% Similarity=0.099 Sum_probs=106.3
Q ss_pred eeeecCcEEEEEEEccCc----cceEEeec-------------------------CCCEEEEE--cCCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKITA-------------------------TETTEMEH--KGKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~~-------------------------~~~~~~~~--~~~~~~L~i~~~~~~ 107 (283)
.+.+|++++|.|.+.+.+ .+ .|... ..++.+.. .+...+|.|.+++.+
T Consensus 33 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 111 (291)
T 2gki_A 33 LVKPGASVKMSCKASGYTFTSYVM-HWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSSLTSE 111 (291)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCE-EEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECSCCGG
T ss_pred EecCCCCEEEEEeccCCcccccEE-EEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECcCCHH
Confidence 466788999999998764 23 22211 13444432 235789999999999
Q ss_pred CCeEEEEEEEecc----e--eeeeeccCCCC----------------CCeEEecCCceeecCCCcEEEEEEEeeecCC--
Q psy14060 108 DDGYYAITERKYY----A--LSDLSEQKPAK----------------PPVFTKKIQPCRAFEQDQARFEVEFDGDPLP-- 163 (283)
Q Consensus 108 D~G~Y~C~a~n~~----~--~~~~~~~~~~~----------------~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-- 163 (283)
|+|.|.|.+.|.. . ......+.+.. ++.+...+....+.+|++++|.|.+.+.+.+
T Consensus 112 DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~ 191 (291)
T 2gki_A 112 DSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSLFNSR 191 (291)
T ss_dssp GCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCCEETT
T ss_pred HCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCcccccc
Confidence 9999999998874 1 11111222222 3344445566789999999999999887655
Q ss_pred ----EEEEEeCC--Ee---cC---------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCc
Q psy14060 164 ----TIKWFRED--FP---IT---------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 164 ----~~~W~k~~--~~---~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 213 (283)
.+.|||+. .. +. ...++.+.......+|.|.++..+|+|.|+|.+.|...
T Consensus 192 ~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~~~ 259 (291)
T 2gki_A 192 TRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSGSGTDFTLTISSVQAEDLAVYYCKQSYYHM 259 (291)
T ss_dssp TTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEEEEEEEETTE
T ss_pred ccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEecCCEEEEEECCCCHHHCEEEEEEEccCCc
Confidence 89999963 21 10 13456555556677899999999999999999998643
No 219
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.74 E-value=4.7e-17 Score=126.06 Aligned_cols=128 Identities=11% Similarity=0.031 Sum_probs=95.6
Q ss_pred cCCceeecCCCcEEEEEEEeeecC-----CEEEEEeC-CEecCCCCCeEEEEe---CCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDPL-----PTIKWFRE-DFPITSSPDFQIHTF---STKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p~-----~~~~W~k~-~~~~~~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
.+....+..|+.+.|.|.+.+.|. +.+.|+|+ +.......++.+... ....+|.|.++..+|+|.|+|.+.
T Consensus 8 p~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 87 (202)
T 3bp6_B 8 PKEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVENDTSLQSERATLLEEQLPLGKALFHIPSVQVRDSGQYRCLVI 87 (202)
T ss_dssp SCSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC--CCCBCSSCEECGGGGGGTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCcccccCCceEEeeccccCCeeEEEECCCCHHHCcEEEEEEE
Confidence 344578899999999999998775 78999994 443333334443322 144689999999999999999999
Q ss_pred eCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEe
Q psy14060 210 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLS 277 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l 277 (283)
|..+.....+.|.|.... ..|.+.. ..+..|+.+.|.|.+.|.|.|.+.|++++..+
T Consensus 88 ~~~~~~~~~~~l~V~~~~-------~~p~~~~----~~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~~ 144 (202)
T 3bp6_B 88 CGAAWDYKYLTVKVKASY-------MRIDTRI----LEVPGTGEVQLTCQARGYPLAEVSWQNVSVPA 144 (202)
T ss_dssp ETTEEEEEEEEEEEEBCC-------CCEEEEE----EECTTTCCEEEEEEEEEBSCCEEEETTCCSCC
T ss_pred eCCCcceEEEEEEecCCC-------CcccEEE----EecCCCCeEEEEEEccccCCceEEEEeCCCCc
Confidence 999888778888887521 1233321 24578999999999999999999999988654
No 220
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.73 E-value=1.3e-17 Score=133.95 Aligned_cols=157 Identities=11% Similarity=0.061 Sum_probs=106.1
Q ss_pred eeeecCcEEEEEEEccCc-----cce-EEeec--------------------CCCEEEEEcCCEEEEEEccCCCCCCeEE
Q psy14060 59 EIHTAKSQQVQKEKKGDK-----EIV-RKITA--------------------TETTEMEHKGKIQERVVDASELDDDGYY 112 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-----~i~-~~~~~--------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 112 (283)
.+.+|++++|.|.+.+.+ ... .|... ..++.+...+....|.|.+++.+|+|.|
T Consensus 45 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y 124 (252)
T 3bkj_L 45 PVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRISRVEAEDLGVY 124 (252)
T ss_dssp EECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEECCCCcccCEEE
Confidence 366788999999998876 122 33221 2466666566778999999999999999
Q ss_pred EEEEEeccee--ee--eeccC-CCCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCCCeE--EE
Q psy14060 113 AITERKYYAL--SD--LSEQK-PAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSPDFQ--IH 183 (283)
Q Consensus 113 ~C~a~n~~~~--~~--~~~~~-~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~~~~--~~ 183 (283)
+|.+.|..+. .. ...+. ...+|.+........+..|+.++|.|.+.+. |.+ .+.|+|++..+....... ..
T Consensus 125 ~C~~~~~~~~~~~~~~~l~V~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~ 204 (252)
T 3bkj_L 125 YCFQASLVPLTFGAGTKLELKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQ 204 (252)
T ss_dssp EEEECSBSSCEECCCEEEEECCCCBCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTEEECSSEEEEECCC
T ss_pred EEEEEcCCccEECCCEEEEEeCCCcCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEEEECCeecCCCeeeecCcc
Confidence 9999887541 11 11222 2235666554443344578899999999985 443 799999998875430000 00
Q ss_pred E--eC---CEEEEEEcCCCCCCCEEEEEEEEeCCcee
Q psy14060 184 T--FS---TKSILIMRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 184 ~--~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
. .+ ..+.|.|..+..+|.|.|+|.+.|.....
T Consensus 205 ~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~~ 241 (252)
T 3bkj_L 205 DSKDSTYSMSSTLTLTKDEYERHNSYTCEATHKTSTS 241 (252)
T ss_dssp CTTTCCEEEEEEEEEEHHHHHHCCEEEEEEECTTCSS
T ss_pred cCCCCCEEEEEEEEEcchhccCCCeEEEEEEeCCCCC
Confidence 0 01 12468999999999999999999976543
No 221
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.73 E-value=1.5e-16 Score=128.95 Aligned_cols=153 Identities=11% Similarity=0.100 Sum_probs=103.6
Q ss_pred eeeecCcEEEEEEEccCcc-----ce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKE-----IV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGYY 112 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~-----i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y 112 (283)
.+.+|++++|.|.+.+.+. .. .|.. ...++.+...+....|.|.+++.+|+|.|
T Consensus 26 ~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y 105 (268)
T 1x9q_A 26 PVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKINRVEAEDLGVY 105 (268)
T ss_dssp CCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEEE
T ss_pred EecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEECCCChhHCEEE
Confidence 3667889999999987651 11 2221 13466666556678999999999999999
Q ss_pred EEEEEecce--eeeeeccCCCCC---------C--------------eEEecCCceeecCCCcEEEEEEEeeec--CCEE
Q psy14060 113 AITERKYYA--LSDLSEQKPAKP---------P--------------VFTKKIQPCRAFEQDQARFEVEFDGDP--LPTI 165 (283)
Q Consensus 113 ~C~a~n~~~--~~~~~~~~~~~~---------p--------------~~~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~ 165 (283)
.|.+.|..+ ......+.+..+ | ..+..+....+.+|++++|.|.+.+.+ .+.+
T Consensus 106 ~C~~~~~~~~~~~~~~~L~V~~~~~~~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 185 (268)
T 1x9q_A 106 FCSQSTHVPWTFGGGTKLEIKSSADDAKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSCVTSGFTFGHYWM 185 (268)
T ss_dssp EEEECSSSSCEECCCEEEC------------------------CGGGCEEEEECCEEECTTCCEEEEEEEESSCGGGCEE
T ss_pred EEEEecCCCceEcCCEEEEEccCccCCCccccccccccccccccccceEEECCCceEecCCCcEEEEEEecCccccccEE
Confidence 999988743 111122333221 1 123334567889999999999998865 3899
Q ss_pred EEEeCC--Eec-------------------CCCCCeEEEEe--CCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 166 KWFRED--FPI-------------------TSSPDFQIHTF--STKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 166 ~W~k~~--~~~-------------------~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.|||+. ..+ ....++.+... .....|.|.++..+|+|.|+|.+.+.
T Consensus 186 ~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~~ 254 (268)
T 1x9q_A 186 NWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMNNLRVEDTGIYYCTGASY 254 (268)
T ss_dssp EEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred EEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEECCCCHHHCEEEEEEEccC
Confidence 999852 211 11235555443 23567999999999999999999874
No 222
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.73 E-value=2.7e-17 Score=127.87 Aligned_cols=124 Identities=16% Similarity=0.138 Sum_probs=99.0
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCE-EEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~-~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
.+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|+|++..+.... ..|.|.++..+|+|.|+|.+.|
T Consensus 6 p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~g~~l~~~~----------~~L~i~~v~~~D~G~Y~C~a~n 75 (204)
T 3sgj_C 6 PKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHNESLISSQA----------SSYFIDAATVDDSGEYRCQTQL 75 (204)
T ss_dssp CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEETTEEESCCS----------SEEEESSCCGGGCEEEEEEETT
T ss_pred CCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEECCEEcccCc----------cEEEEecccccCCEEEEEEeCC
Confidence 356677777778899999999999999988775 99999999886542 4699999999999999999987
Q ss_pred CCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCCeeEEeeCCEEec
Q psy14060 211 RGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPLDVYWLKVSSLSD 278 (283)
Q Consensus 211 ~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~~v~W~~~g~~l~ 278 (283)
. .....+.|.|.. +|.+...+. ..+.+|+.+.|.|.+.+. |.+.+.|++||+.+.
T Consensus 76 ~--~~s~~~~l~V~~----------~p~~~~~~~-~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g~~~~ 131 (204)
T 3sgj_C 76 S--TLSDPVQLEVHI----------GWLLLQAPR-WVFKEEDPIHLRCHSWKNTALHKVTYLQNGKGRK 131 (204)
T ss_dssp S--BCCCCEEEEEEC----------SSEEEECSC-SEEETTCCEEEEEEEGGGCCCEEEEEEETTEEEE
T ss_pred C--cccccEEEEEec----------CceEecCCc-eeEeCCCcEEEEEEecCCCCCceEEEEECCcEee
Confidence 4 334456777764 455554443 678899999999999665 557899999999874
No 223
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.73 E-value=7.9e-17 Score=126.19 Aligned_cols=138 Identities=13% Similarity=0.111 Sum_probs=100.1
Q ss_pred eEEecCCceeecCCCcEEEEEEEeee-cCCEEEEEeCC---E-------------ecC--CCCCeEEEEeCCEEEEEEcC
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGD-PLPTIKWFRED---F-------------PIT--SSPDFQIHTFSTKSILIMRQ 195 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~~~~W~k~~---~-------------~~~--~~~~~~~~~~~~~~~l~i~~ 195 (283)
.+...+ ...+.+|+++.|.|.+.+. |.+.+.|||.. . ... ...++.+.......+|.|.+
T Consensus 3 ~v~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~ 81 (218)
T 3s96_B 3 VLTQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSSSGADRYLSISN 81 (218)
T ss_dssp SEECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEEETTEEEEEESS
T ss_pred eEEeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEecCCceEEEEEcc
Confidence 344445 6789999999999999998 88999999832 1 000 11356555566677899999
Q ss_pred CCCCCCEEEEEEEEeCCc-----eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCC-ee
Q psy14060 196 VFMEDSGVFAVIAENRGG-----KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPL-DV 268 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~-~v 268 (283)
+..+|+|.|.|.+.|..| .......|.|.... ..+|.+...+....+..|+.+.|.|.+.| .|.+ .+
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~~~~~~~~~~~~~~~~v~L~C~~~g~~p~~~~v 155 (218)
T 3s96_B 82 IQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLGQP------KSTPTLTVFPPSSEELKENKATLVCLISNFSPSGVTV 155 (218)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEESCC------CBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEE
T ss_pred CCcccCEEEEEEEecCCCCceeEEEcCcEEEEEecCC------CCCceEEeeCCCcccccCCcEEEEEEECcccCCCeEE
Confidence 999999999999998776 22334567776421 13566665555555567899999999998 5666 89
Q ss_pred EEeeCCEEecC
Q psy14060 269 YWLKVSSLSDV 279 (283)
Q Consensus 269 ~W~~~g~~l~~ 279 (283)
.|++||+.+..
T Consensus 156 ~W~k~g~~l~~ 166 (218)
T 3s96_B 156 AWKANGTPITQ 166 (218)
T ss_dssp EEEETTEEC--
T ss_pred EEEECCEECcC
Confidence 99999998864
No 224
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.73 E-value=6.9e-17 Score=126.90 Aligned_cols=159 Identities=11% Similarity=0.098 Sum_probs=103.5
Q ss_pred eeeecCcEEEEEEEccCc--cce-EEeec---------------------------CCCEEEEE--cCCEEEEEEccCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK--EIV-RKITA---------------------------TETTEMEH--KGKIQERVVDASEL 106 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~--~i~-~~~~~---------------------------~~~~~~~~--~~~~~~L~i~~~~~ 106 (283)
.+.+|++++|.|.+.+.+ ... .|... ..++.+.. ..+...|.|.+++.
T Consensus 11 ~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 90 (220)
T 1pz5_B 11 LVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMNNLRA 90 (220)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEECSCCG
T ss_pred EEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEccCCH
Confidence 366788999999998754 111 22110 24555543 23567999999999
Q ss_pred CCCeEEEEEEEecce------eeeeeccC--CCCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecC-
Q psy14060 107 DDDGYYAITERKYYA------LSDLSEQK--PAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPIT- 175 (283)
Q Consensus 107 ~D~G~Y~C~a~n~~~------~~~~~~~~--~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~- 175 (283)
+|+|.|.|.+.+..+ ......+. ...+|.+........+..|+.+.|.|.+.|. |.| .+.|++++....
T Consensus 91 ~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~~~~~ 170 (220)
T 1pz5_B 91 EDTGIYYCTRGGAVGAMDYWGQGTSVTVSSATTTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTVKWNYGALSSGV 170 (220)
T ss_dssp GGCEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEEEEGGGTCCTTE
T ss_pred HHCEEEEEEEecCCcccceECCCEEEEEccCCCCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEEEEecCCcccce
Confidence 999999999998642 11111222 2235655544434456789999999999987 888 999999876311
Q ss_pred -CCCCeEE-EEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEE
Q psy14060 176 -SSPDFQI-HTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCS 218 (283)
Q Consensus 176 -~~~~~~~-~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 218 (283)
....... ......+.|.|.....+| |.|+|.|.|..+.....
T Consensus 171 ~~~~~~~~~~~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~ 214 (220)
T 1pz5_B 171 RTVSSVLQSGFYSLSSLVTVPSSTWPS-QTVICNVAHPASKVDLI 214 (220)
T ss_dssp EECCCEEETTEEEEEEEEEECGGGTTT-SCCEEEEEEGGGTEEEE
T ss_pred EEcCCcccCCeEEEEEEEEEcchhcCC-ceEEEEEEECCccEeee
Confidence 0011100 000013468898888766 99999999998865543
No 225
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.73 E-value=1.7e-16 Score=128.36 Aligned_cols=153 Identities=10% Similarity=0.099 Sum_probs=103.8
Q ss_pred eeeecCcEEEEEEEccCc------cce-EEee--------------------cCCCEEEEEcCCEEEEEEccCCCCCCeE
Q psy14060 59 EIHTAKSQQVQKEKKGDK------EIV-RKIT--------------------ATETTEMEHKGKIQERVVDASELDDDGY 111 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~------~i~-~~~~--------------------~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 111 (283)
.+.+|++++|.|.+.+.+ ... .|.. ...++.+...+....|.|.+++.+|+|.
T Consensus 16 ~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~DsG~ 95 (264)
T 2gjj_A 16 PVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLTIGSVKAEDLAV 95 (264)
T ss_dssp EEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGCEE
T ss_pred EecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEEECCCCHHHCEE
Confidence 467788999999998875 111 2221 1346666555667899999999999999
Q ss_pred EEEEEEeccee--eeeeccCCCCC------------------C-eEEecCCceeecCCCcEEEEEEEeeecC--CEEEEE
Q psy14060 112 YAITERKYYAL--SDLSEQKPAKP------------------P-VFTKKIQPCRAFEQDQARFEVEFDGDPL--PTIKWF 168 (283)
Q Consensus 112 Y~C~a~n~~~~--~~~~~~~~~~~------------------p-~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~~~W~ 168 (283)
|.|.+.+..+. .....+.+..+ | ..+..+....+.+|++++|.|.+.+.+. +.+.||
T Consensus 96 Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~ 175 (264)
T 2gjj_A 96 YYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASGYSFTGYFINWV 175 (264)
T ss_dssp EEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred EEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeCCccCCeEEEEE
Confidence 99999886431 11112222222 1 2223334457899999999999988753 799999
Q ss_pred eCC--Ee---cC----C----------CCCeEEEEe--CCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 169 RED--FP---IT----S----------SPDFQIHTF--STKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 169 k~~--~~---~~----~----------~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
|+. .. +. . ..++.+... .....|.|.++..+|+|.|+|.+.|.
T Consensus 176 r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~n~ 239 (264)
T 2gjj_A 176 KKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTSEDSADYYCVRSGN 239 (264)
T ss_dssp EECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEECS
T ss_pred EECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCcccCEEEEEEEecC
Confidence 963 11 10 0 234444332 34678999999999999999999985
No 226
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.73 E-value=2.2e-17 Score=127.83 Aligned_cols=156 Identities=11% Similarity=0.045 Sum_probs=98.4
Q ss_pred eeeecCcEEEEEEEcc----Cccce-EEeecC------------------CCEEEEEcCCEEEEEEccCCCCCCeEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKG----DKEIV-RKITAT------------------ETTEMEHKGKIQERVVDASELDDDGYYAIT 115 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g----~~~i~-~~~~~~------------------~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 115 (283)
.+.+|+.+.|.|.+.+ .+.+. .|.... .+..+. ..+..+|.|.+++.+|+|.|+|.
T Consensus 5 ~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~~-~~~~~~L~I~~v~~~D~G~Y~C~ 83 (201)
T 1dr9_A 5 TKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIFD-ITNNLSIVILALRPSDEGTYECV 83 (201)
T ss_dssp EEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEEE-STTTTEEEECSCCGGGCEEEEEE
T ss_pred EEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEEc-cCCCcEEEEecccchhCeEEEEE
Confidence 3667889999999964 23222 222211 122221 12346899999999999999999
Q ss_pred EEeccee------eeeeccCCCC---CCeEEecCCceeecCCCcEEEEEEEe-eecCCEEEEEeCCEecCCCCCeEEEEe
Q psy14060 116 ERKYYAL------SDLSEQKPAK---PPVFTKKIQPCRAFEQDQARFEVEFD-GDPLPTIKWFREDFPITSSPDFQIHTF 185 (283)
Q Consensus 116 a~n~~~~------~~~~~~~~~~---~p~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~~~W~k~~~~~~~~~~~~~~~~ 185 (283)
+.|..+. .....+.+.. .|.+... ....|+.+.|.|.+. |.|.|.+.|++++..+.... ......
T Consensus 84 ~~~~~g~~~~~~~~~~~~l~V~~~~~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~~~-~~~~~~ 158 (201)
T 1dr9_A 84 VLKYEKDAFKREHLAEVTLSVKADFPTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNAIN-TTVSQD 158 (201)
T ss_dssp EEECCTTSCEEEEEEEEEEEEECCCCCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECCSE-EEEEEC
T ss_pred EEcCCCCccccccccEEEEEEcCCCCCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECcccc-ceEEec
Confidence 9996542 1222333322 2433321 124588999999995 88999999999998876432 222222
Q ss_pred C--CE-EEEEEcCCCCCCCEEEEEEEEeCCceeEEEEE
Q psy14060 186 S--TK-SILIMRQVFMEDSGVFAVIAENRGGKAKCSAN 220 (283)
Q Consensus 186 ~--~~-~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 220 (283)
. .. ....+..+..+|.|.|+|.|.|..+.....+.
T Consensus 159 ~~~~~~~~~~~~~v~~~d~g~Y~C~a~n~~~~~s~~~~ 196 (201)
T 1dr9_A 159 PETELYAVSSKLDFNMTTNHSFMCLIKYGHLRVNQTFN 196 (201)
T ss_dssp TTTCCEEEEEEEEEETTSCEEEEEEEEETTCCEEEEEE
T ss_pred CCCcEEEEEEEEEEEecCCCEEEEEEecCcceeeeEEe
Confidence 1 21 11122344568999999999999988766554
No 227
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.72 E-value=5.1e-17 Score=126.72 Aligned_cols=130 Identities=13% Similarity=0.050 Sum_probs=98.6
Q ss_pred ceeecCCCcEEEEEEEeeecCCEEEEEeC--CEecC------------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEE
Q psy14060 142 PCRAFEQDQARFEVEFDGDPLPTIKWFRE--DFPIT------------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVI 207 (283)
Q Consensus 142 ~~~~~~g~~v~l~C~~~g~p~~~~~W~k~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 207 (283)
...+.+|+.+.|.|.+. |.+.+.|+|+ +..+. ...++.+.......+|.|.++..+|+|.|+|.
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 86 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSKSGNTASLTVSGLQTDDEAVYYCG 86 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEEETTEEEEEEESCCGGGCEEEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEccCCEEEEEECCCChhHCEEEEEE
Confidence 67889999999999998 8889999994 22211 22456666666778899999999999999999
Q ss_pred EEeCCc--eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeC--CCeeEEeeCCEEecC
Q psy14060 208 AENRGG--KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATK--PLDVYWLKVSSLSDV 279 (283)
Q Consensus 208 a~n~~g--~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g~~l~~ 279 (283)
+.|..+ .......|.|.... ..+|.+...+....+..|+.+.|.|.+.|.+ .+.+.|++||+.+..
T Consensus 87 ~~~~~~~~~~~~~~~l~V~~~~------~~~P~v~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~k~g~~l~~ 156 (211)
T 3tv3_L 87 SLVGNWDVIFGGGTKLTVLGQP------KAAPSVTLFPPSSEELQANKATLVCLISDFYPGAVTVAWKADSSPVKA 156 (211)
T ss_dssp EEETTTEEEECCCEEEEECCSC------CBCCEEEEECCCHHHHHTTCEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred EecCCCceeECCCceEEEeCCC------CcCCeeEecCCchhhhcCCCeEEEEEeeeecCCCeEEEEEECCeecCC
Confidence 999887 33344566666311 1367777666555556899999999999864 468999999998854
No 228
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.72 E-value=7.7e-18 Score=137.33 Aligned_cols=207 Identities=11% Similarity=-0.002 Sum_probs=93.6
Q ss_pred eeeecCcEEEEEEEccCc-cceEEeecCCCEEE-EEcCCEEEEEEccCCCCCCeEEEEEEEecce-eeeeeccCCCCCCe
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EIVRKITATETTEM-EHKGKIQERVVDASELDDDGYYAITERKYYA-LSDLSEQKPAKPPV 135 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~-~~~~~~~~~~~~p~ 135 (283)
.|.+|++++|.|.+.-.. ....+.....+... ........|.|.+++.. |.|.|.+..... ......+.+..+|.
T Consensus 10 ~V~~G~sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~g~~~~~~~l~~v~~~--~~y~C~~~~~~~~~~~~v~l~V~~~P~ 87 (291)
T 1mq8_A 10 ILPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQED--SQPMCYSNCPDGQSTAKTFLTVYWTPE 87 (291)
T ss_dssp EECTTCEEEEEEEECCSSCSEEEEECSSCCCCCCCSCSSEEEEEEESCCSC--CCCEEEEECSSCEEEEECEEEECBCCS
T ss_pred EEcCCCeEEEEEeCCCCCCccceEEecCCCcccccCCCceEEEEEEecccC--CeEEEEEEcCCccEEEEEEEEEecCCC
Confidence 377789999999996332 32222211111122 12224557889988743 569999864422 22333344444443
Q ss_pred EE-ecCCceeecCCCcEEEEEEEeee-cCC--EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 136 FT-KKIQPCRAFEQDQARFEVEFDGD-PLP--TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 136 ~~-~~~~~~~~~~g~~v~l~C~~~g~-p~~--~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
-. ..+....+..|+.++|.|.+.+. |.. .|+|||++..+..... .......++.+......+.+.|+|.|.|.
T Consensus 88 ~v~I~~~~~~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~~l~~~~~---~~~~~~~~l~~~~~~~D~g~~~~C~A~~~ 164 (291)
T 1mq8_A 88 RVELAPLPSWQPVGKNLTLRCQVEGGAPRANLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRRDHHGANFSCRTELD 164 (291)
T ss_dssp CCCBCCCCSBCCSSCCCEEEEEECCCBSTTTEEEEEESSSSEEEEEEC---CBTTEEEEEECCCSSSCSSCEEEEEEEEE
T ss_pred CCEEecCCccccCCCCEEEEEEecCccCCCCcEEEEEECCEEeecccC---CCCCceEEEEeeeeeccCCceEEEEEEec
Confidence 22 22333457889999999999875 443 6999999977643210 00112235666666666667999999987
Q ss_pred Cce--------eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC---eeEEeeCCEEecC
Q psy14060 212 GGK--------AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL---DVYWLKVSSLSDV 279 (283)
Q Consensus 212 ~g~--------~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~---~v~W~~~g~~l~~ 279 (283)
.+. .+....|.|... |+..........+.+|+.++|.|.+.|.|++ .++|++||+.+..
T Consensus 165 l~~~g~~l~~~~s~~~~L~V~~~---------P~~~~~~~~p~~l~eG~~v~l~C~~~g~~P~~~~~v~w~~~g~~l~~ 234 (291)
T 1mq8_A 165 LRPQGLELFENTSAPYQLQTFVL---------PATPPQLVSPRVLEVDTQGTVVCSLDGLFPVSEAQVHLALGDQRLNP 234 (291)
T ss_dssp CGGGTSCEEEECCCCEECBC-----------------------------------------------------------
T ss_pred CCccCCccccccccceEEEEEec---------CCCCceecCCcCccCCCeEEEEEEcCCCCCCcccEEEEEECCEecCc
Confidence 552 122345666542 2111111112367899999999999997655 5999999998863
No 229
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.72 E-value=5.4e-17 Score=122.96 Aligned_cols=125 Identities=16% Similarity=0.134 Sum_probs=98.8
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCE-EEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~-~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
..+|.+...+....+.+|+.+.|.|.+.+.|.+. +.|+|++..+.. ....|.|.++..+|+|.|+|.+.
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~~~~~~----------~~~~L~i~~~~~~d~G~Y~C~~~ 74 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNESLISS----------QASSYFIDAATVNDSGEYRCQTN 74 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETTEEEES----------SCSEEEESSCCGGGCEEEEEECS
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECCEEccC----------CceEEEEeCCCcccCEEEEEEee
Confidence 3467777777777899999999999999988766 889999987753 23369999999999999999998
Q ss_pred eCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC-eeEEeeCCEEec
Q psy14060 210 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL-DVYWLKVSSLSD 278 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~-~v~W~~~g~~l~ 278 (283)
|..+ .....|.|.. ++.+... ....+.+|+.+.|.|.+.+.|++ .+.|+++|..+.
T Consensus 75 n~~~--s~~~~l~V~~----------~~~~~~~-~~~~~~~g~~~~l~C~~~~~~~~~~~~W~k~g~~~~ 131 (175)
T 1fnl_A 75 LSTL--SDPVQLEVHI----------GWLLLQA-PRWVFKEEDPIHLRCHSWKNTALHKVTYLQNGKDRK 131 (175)
T ss_dssp SSCC--CCCEEEEEEC----------SSEEEEC-SCSEEETTCCEEEEEEECTTCCCEEEEEEETTEEEE
T ss_pred CCcc--cccEEEEEeC----------CCceeeC-CCceecCCCCEEEEEEcCCCCCceEEEEEECCeEcc
Confidence 8554 3345666663 3444333 44678899999999999887665 999999999874
No 230
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.72 E-value=4.2e-17 Score=127.76 Aligned_cols=164 Identities=10% Similarity=-0.033 Sum_probs=105.7
Q ss_pred eeecCcEEEEEEEccCcc--ce--EEeecCCCEEEE-----------------------------EcCCEEEEEEccCCC
Q psy14060 60 IHTAKSQQVQKEKKGDKE--IV--RKITATETTEME-----------------------------HKGKIQERVVDASEL 106 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~--i~--~~~~~~~~~~~~-----------------------------~~~~~~~L~i~~~~~ 106 (283)
+.+|++++|.|.+.+.+. +. .|.......... ......+|.|.+++.
T Consensus 13 ~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~ 92 (225)
T 4fmk_A 13 GRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFRGLRV 92 (225)
T ss_dssp EETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEECSCCG
T ss_pred EecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEccCCH
Confidence 557889999999988762 21 444333222110 112345799999999
Q ss_pred CCCeEEEEEEEecceee--eeeccCCCCCCeEEecCCceeecCCCcEEEEEEEe-eecCCEEEEEeCCEecCCCCCeEEE
Q psy14060 107 DDDGYYAITERKYYALS--DLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFD-GDPLPTIKWFREDFPITSSPDFQIH 183 (283)
Q Consensus 107 ~D~G~Y~C~a~n~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~-g~p~~~~~W~k~~~~~~~~~~~~~~ 183 (283)
+|+|.|+|.+.|..+.. ....+.+..+|.....+.......++.+.+.|.+. +.|.+.+.|++++..+.........
T Consensus 93 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~~~~~~~~~~~~~~~ 172 (225)
T 4fmk_A 93 EDEGNYTCEFATFPNGTRRGVTWLRVIAQPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWISSLGGEAKDTQEPGI 172 (225)
T ss_dssp GGCEEEEEEEEEETTEEEEEEEEEEEEBCCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEECSSCCEEEEEEEECS
T ss_pred HHCcceEEEEEeCCCcceeeeeeeeeecCCceeecccceeecceeeeeeeeeecCCCCCCEEEEEECCccccCCcceEEe
Confidence 99999999998876532 22223334455555555555666777777777765 5678899999987654321111100
Q ss_pred EeCC---EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEE
Q psy14060 184 TFST---KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223 (283)
Q Consensus 184 ~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 223 (283)
..+. .+.|.|..+..+|.|.|+|.|.|..+.....+.+.+
T Consensus 173 ~~~~~~~~s~L~i~~~~~~d~g~YtC~a~N~~~~~~~~~~v~l 215 (225)
T 4fmk_A 173 QAGTVTIISRYSLVPVGRADGVKVTCRVEHESFEEPILLPVTL 215 (225)
T ss_dssp STTCEEEEEEEEECCCGGGTTCEEEEEEECTTCSSCEEEEEEC
T ss_pred cCCCEEEEEEEEEeeCCHHHCCEEEEEEEcCCCCeEEEEEEEE
Confidence 0111 246999999999999999999999877654444443
No 231
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.72 E-value=2e-18 Score=134.26 Aligned_cols=147 Identities=12% Similarity=0.087 Sum_probs=94.1
Q ss_pred eeecCcEEEEEEEccCccceEEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeeeeccC----------
Q psy14060 60 IHTAKSQQVQKEKKGDKEIVRKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSDLSEQK---------- 129 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~i~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~~---------- 129 (283)
+.+|+.++|.|.+ ..+.+ .|...+...... ......|.|.+++.+|+|.|+|.+.+.........+.
T Consensus 15 ~~~G~~v~L~C~~-p~~~i-~W~k~g~~l~~~-~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s~~~~v~v~~~~~~~~~~~ 91 (204)
T 1sy6_A 15 YQEDGSVLLTCDA-EAKNI-TWFKDGKMIGFL-TEDKKKWNLGSNAKDPRGMYQCKGSQNKSKPLQVYYRMGSADDAKKD 91 (204)
T ss_dssp CCSSSEEEEEECS-CSSEE-EEEETTEEEEEE-ESSCCCEEEEEGGGCCEEEEEEESSSSCCCCEEEEEEC---------
T ss_pred ecCCCeEEEEEcC-CCCEE-EEEECCEECCCC-CCCCCeEEeCCCCcCCCEEEEEEecCCCCeeEEEEEEEecccccccc
Confidence 4568899999998 44444 455444333221 1234679999999999999999965533211111000
Q ss_pred -------------------CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC-CeEEEEeCCEE
Q psy14060 130 -------------------PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP-DFQIHTFSTKS 189 (283)
Q Consensus 130 -------------------~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~-~~~~~~~~~~~ 189 (283)
...++.+. ........+|+++.|.|. +.|.|.+.|+|++..+.... ...+... ..
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~p~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~~~~~~~~~~~--~~ 166 (204)
T 1sy6_A 92 AAKKDDAKKDDAKKDGSDGNEEMGGIT-QTPYKVSISGTTVILTCP--QYPGSEILWQHNDKNIGGDEDDKNIGSD--ED 166 (204)
T ss_dssp ----------------------------CCCCEEEEETTEEEEECS--CCCSSCEEEEETTEEESCCTTCTTEEEE--TT
T ss_pred cccccccccccccccccccccccccee-cCCceeeecCCcEEEEcC--CCCCCceEEEECCEECCCccCCceEecC--CC
Confidence 00012121 112222338999999998 77889999999999876431 1112212 23
Q ss_pred EEEEcCC-CCCCCEEEEEEEEeCCce
Q psy14060 190 ILIMRQV-FMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 190 ~l~i~~~-~~~d~G~Y~C~a~n~~g~ 214 (283)
.|.|.++ ..+|+|.|+|.|.|..|.
T Consensus 167 ~L~I~~v~~~~D~G~Y~C~A~N~~g~ 192 (204)
T 1sy6_A 167 HLSLKEFSELEQSGYYVCYPRGSKPE 192 (204)
T ss_dssp EEEETTCCHHHHCEEEEEEETTSCGG
T ss_pred EEEEeeCCccccCEEEEEEeccCCCC
Confidence 6999999 999999999999999986
No 232
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.72 E-value=1.1e-17 Score=129.96 Aligned_cols=134 Identities=16% Similarity=0.301 Sum_probs=103.0
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEec------------CCCCCeEEEEeCCEEEEEEcCCCCCC
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPI------------TSSPDFQIHTFSTKSILIMRQVFMED 200 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d 200 (283)
++.+...+....+.+|+.+.|.|.+.+.|.+.+.|++++..+ ....++.+. . ..|.|.++..+|
T Consensus 4 ~~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~--~--~~L~i~~~~~~d 79 (209)
T 1nbq_A 4 SVTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL--P--TGITFKSVTRED 79 (209)
T ss_dssp CCEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE--T--TEEECSCCCTTS
T ss_pred eEEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee--c--cEEEEeeCCHHH
Confidence 455666677788999999999999999899999999986542 112233332 2 569999999999
Q ss_pred CEEEEEEEEeCCce--eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEE-EeeCCCeeEEeeCCEEe
Q psy14060 201 SGVFAVIAENRGGK--AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKI-SATKPLDVYWLKVSSLS 277 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~--~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~-~g~p~~~v~W~~~g~~l 277 (283)
+|.|+|.+.|..|. ......|.|.. +|.+........+..|+.+.|.|.+ .+.|.|.+.|+++|..+
T Consensus 80 ~G~Y~C~~~~~~g~~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~~~ 149 (209)
T 1nbq_A 80 TGTYTCMVSEEGGNSYGEVKVKLIVLV----------PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVM 149 (209)
T ss_dssp CSEEEEEEEETTSSCEECCEEECCEEB----------CCCCCCCCCBSEEETTSCEEECCCCCSCBSCCEEEEEETTCCC
T ss_pred CcEEEEEEecCCCCccceEEEEEEEec----------CCcCCCcccccceecCCEEEEEEeCCCCCCCceeEEEECCeeC
Confidence 99999999998653 34456666664 4544444445678999999999997 89999999999999887
Q ss_pred cCC
Q psy14060 278 DVK 280 (283)
Q Consensus 278 ~~~ 280 (283)
...
T Consensus 150 ~~~ 152 (209)
T 1nbq_A 150 PTN 152 (209)
T ss_dssp CSC
T ss_pred CCc
Confidence 653
No 233
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.72 E-value=4.1e-17 Score=130.56 Aligned_cols=164 Identities=10% Similarity=0.078 Sum_probs=100.5
Q ss_pred eeeecCcEEEEEEEccCccc------eEEeecCCC----EEE-E-------------------EcCCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDKEI------VRKITATET----TEM-E-------------------HKGKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i------~~~~~~~~~----~~~-~-------------------~~~~~~~L~i~~~~~~D 108 (283)
.+.+|+.++|.|.+.|.|.. ..|...... ..+ . ...+..+|.|.+++.+|
T Consensus 14 ~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~v~~~D 93 (248)
T 3pv7_A 14 ITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPGIQLEE 93 (248)
T ss_dssp EEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESSCCGGG
T ss_pred EEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCCCCHHH
Confidence 36678899999999887621 133322100 000 0 01123459999999999
Q ss_pred CeEEEEEEEeccee-eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCCC----C--
Q psy14060 109 DGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSSP----D-- 179 (283)
Q Consensus 109 ~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~~----~-- 179 (283)
+|.|+|.+.+..+. .....+.+..+|.+...+. .....|+.+.|.|.+.| +|.+ .+.|++++..+.... .
T Consensus 94 ~G~Y~C~~~~~~~~~~~~~~L~V~~~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~g~~l~~~~~~~~~~~ 172 (248)
T 3pv7_A 94 AGEYRCEVVVTPLKAQGTVQLEVVASPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQTQKFPHPIEISEDVI 172 (248)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEBCCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEECSSSCSCEEECTTEE
T ss_pred CeEEEEEEEeCCccceeEEEEEEecCCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEECCccCCCcccccccee
Confidence 99999999988763 3344455556777665544 33456778889999998 7888 999999986443210 0
Q ss_pred -eEEEEeC-----CEEEEEEcCCCCCCCEEEEEEEEeCCcee--EEEEEEEE
Q psy14060 180 -FQIHTFS-----TKSILIMRQVFMEDSGVFAVIAENRGGKA--KCSANLVV 223 (283)
Q Consensus 180 -~~~~~~~-----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~--~~~~~l~v 223 (283)
....... ....|.|.....+|.|.|+|.+.|..+.. ...+.|.|
T Consensus 173 ~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~YtC~a~n~~~~~~~~~~v~l~V 224 (248)
T 3pv7_A 173 TGPTIKNMDGTFNVTSCLKLNSSQEDPGTVYQCVVRHASLHTPLRSNFTLTA 224 (248)
T ss_dssp EEEEEECTTSCEEEEEEEECC--CCCTTCEEEEEEECTTCSSCEEEEECC--
T ss_pred ecccEECCCCCEEEEEEEEEcCccccCCCEEEEEEECCCCCCCcEEEEEEEE
Confidence 0111111 12468888899999999999999998764 44455555
No 234
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.72 E-value=3.4e-17 Score=125.16 Aligned_cols=129 Identities=9% Similarity=-0.001 Sum_probs=98.3
Q ss_pred CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 130 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 130 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
...+|.+...+.. .+.+|++++|.|.+.+ +.+.+.|+|++... . .....|.|.++..+|+|.|+|.+.
T Consensus 5 ~~~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~~--------~--~~~~~L~i~~v~~~D~G~Y~C~a~ 72 (184)
T 2gi7_A 5 PLPKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSSR--------Y--QDQAVLFIPAMKRSLAGRYRCSYQ 72 (184)
T ss_dssp CBCCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTCC--------E--ESSSEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCccc--------c--CcccEEEECcCChhhCceEEEEEE
Confidence 3457777776664 7899999999999988 88899999998651 0 123469999999999999999999
Q ss_pred eCCcee--EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecC
Q psy14060 210 NRGGKA--KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 210 n~~g~~--~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~ 279 (283)
|..|.. +..+.|.|.... .+|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+++|..+..
T Consensus 73 n~~g~~~~s~~~~l~V~~~~-------~~p~i~~~p-~~~v~~G~~v~l~C~~~~~-~~~~~w~k~g~~~~~ 135 (184)
T 2gi7_A 73 NGSLWSLPSDQLELVATGVF-------AKPSLSAQP-GPAVSSGGDVTLQCQTRYG-FDQFALYKEGDPAPY 135 (184)
T ss_dssp ETTEEBCCCCCEEEEEESSS-------CCCEEEEEC-CCSSCCTTCEEEEEECSSC-CCEEEEEECCCCTTS
T ss_pred cCCCccCCCCCEEEEecCcC-------CCCEEEeCC-CceecCCCcEEEEEEcCCC-CcEEEEEECCCcCcc
Confidence 987642 334666665421 356666555 4567899999999998764 469999999987653
No 235
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.72 E-value=3.7e-16 Score=107.62 Aligned_cols=98 Identities=20% Similarity=0.327 Sum_probs=88.8
Q ss_pred cCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEE
Q psy14060 128 QKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVI 207 (283)
Q Consensus 128 ~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 207 (283)
+.+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+|++..+....++.+........|.|.++..+|+|.|+|.
T Consensus 3 l~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~ 82 (103)
T 3qp3_A 3 FTLDHAPRITLRMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNGVELQESSKIHYTNTSGVLTLEILDCHTDDSGTYRAV 82 (103)
T ss_dssp TTTCEEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCCCCCCEEEeCCcceEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCEEEEECCCEEEEEEcCCCcccCEEEEEE
Confidence 34556888888888899999999999999999999999999999999887788888777888999999999999999999
Q ss_pred EEeCCceeEEEEEEEEEe
Q psy14060 208 AENRGGKAKCSANLVVEE 225 (283)
Q Consensus 208 a~n~~g~~~~~~~l~v~~ 225 (283)
|.|..|.....+.|.|..
T Consensus 83 a~N~~G~~~~~~~l~V~~ 100 (103)
T 3qp3_A 83 CTNYKGEASDYATLDVTG 100 (103)
T ss_dssp EEETTEEEEEEEEEEEEC
T ss_pred EEeCCCcEEEEEEEEEEC
Confidence 999999999889998875
No 236
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.71 E-value=1.6e-16 Score=125.98 Aligned_cols=140 Identities=12% Similarity=0.074 Sum_probs=104.1
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--E-----------e-cCCCCCeEEEEeCCEEEEEEcCCCC
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--F-----------P-ITSSPDFQIHTFSTKSILIMRQVFM 198 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~-----------~-~~~~~~~~~~~~~~~~~l~i~~~~~ 198 (283)
.+.+...+....+..|+++.|.|.+.+.|.+.+.|+|+. . . .....++.+.......+|.|.++..
T Consensus 24 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 103 (237)
T 3sob_L 24 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 103 (237)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred cceEEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEcCCCEEEEEECCCCh
Confidence 344555667788999999999999998888999999842 1 1 1123466666666778899999999
Q ss_pred CCCEEEEEEEEeCCcee-EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-C-CCeeEEeeCCE
Q psy14060 199 EDSGVFAVIAENRGGKA-KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-K-PLDVYWLKVSS 275 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p-~~~v~W~~~g~ 275 (283)
+|+|.|.|.+.+..+.. .....+.|.... .+|.+...+....+..|+.+.|.|.+.+. | .+.+.|++||.
T Consensus 104 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~-------~~p~v~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~k~g~ 176 (237)
T 3sob_L 104 EDFATYYCQQSYTTPPTFGQGTKVEIKRTV-------AAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNA 176 (237)
T ss_dssp GGCEEEEEEECSSSSCEECCCEEEEEECCC-------BCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEEEETTE
T ss_pred hhCeEEEEeeccCCceEEcCcEEEEEecCC-------CCCceEEeCCChhhccCCceEEEEEEcccCCCceEEEEEECCC
Confidence 99999999998876532 223456654321 46777665555555678999999999985 4 47999999999
Q ss_pred EecC
Q psy14060 276 LSDV 279 (283)
Q Consensus 276 ~l~~ 279 (283)
.+..
T Consensus 177 ~~~~ 180 (237)
T 3sob_L 177 LQSG 180 (237)
T ss_dssp ECCS
T ss_pred CCCC
Confidence 8864
No 237
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.71 E-value=9.8e-17 Score=125.29 Aligned_cols=149 Identities=10% Similarity=0.100 Sum_probs=96.7
Q ss_pred eeeecCcEEEEEEEccC-------ccce-EEeec-----------------------CCCEEEEE--cCCEEEEEEccCC
Q psy14060 59 EIHTAKSQQVQKEKKGD-------KEIV-RKITA-----------------------TETTEMEH--KGKIQERVVDASE 105 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~-------~~i~-~~~~~-----------------------~~~~~~~~--~~~~~~L~i~~~~ 105 (283)
.+.+|+.++|.|.+.+. +... .|... ..++.+.. ..+..+|.|.+++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 90 (214)
T 2zg1_A 11 TVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSLSIGDAR 90 (214)
T ss_dssp EEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCEEECSCC
T ss_pred EEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEEEEccCC
Confidence 36678899999999864 2111 23221 13444332 1235579999999
Q ss_pred CCCCeEEEEEEEeccee--e---eeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEeee----cCCEEEEEeCCEe
Q psy14060 106 LDDDGYYAITERKYYAL--S---DLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFDGD----PLPTIKWFREDFP 173 (283)
Q Consensus 106 ~~D~G~Y~C~a~n~~~~--~---~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~----p~~~~~W~k~~~~ 173 (283)
.+|+|.|.|.+.+..+. . ....+.+ ..+|.+.. +. .+.+|+.++|.|.+.+. |.|.+.|++++..
T Consensus 91 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~p~p~v~W~~~~~~ 167 (214)
T 2zg1_A 91 MEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALIEKPDIHF-LE--PLESGRPTRLSCSLPGSCEAGPPLTFSWTGNALS 167 (214)
T ss_dssp GGGCEEEEEEEEETTTEEEECCSSCEEEEEECCCCCCEEC---C--CCCTTCCEEEEEECTTCCSCSSCCEEEEESSTTS
T ss_pred HhhCceEEEEEEcCCCceeeecCCceEEEEecCCCCCceec-Cc--cccCCCeEEEEEEeccCCCCCCCceEEEeCCCCc
Confidence 99999999999887521 1 1222222 22454433 22 36789999999999763 7899999999865
Q ss_pred cCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 174 ITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 174 ~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
+..... .....|.|..+..+|.|.|+|.|.|..+...
T Consensus 168 ~~~~~~------~~~~~L~i~~~~~~~~g~Y~C~a~n~~~~~~ 204 (214)
T 2zg1_A 168 PLDPET------TRSSELTLTPRPEDHGTNLTCQMKRQGAQVT 204 (214)
T ss_dssp SSCSSC------CCSSEEEECCCTTCCSCEEEEEEECC----C
T ss_pred cCCCCc------eeEEEEEEecccHHcCcEEEEEEEeCCCCcc
Confidence 432111 2345699999999999999999999765433
No 238
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.71 E-value=2.2e-16 Score=123.17 Aligned_cols=134 Identities=12% Similarity=0.067 Sum_probs=98.0
Q ss_pred CCceeecCCCcEEEEEEEeeec---CCEEEEEeCC--Eec------------CCCCCeEEEEeCCEEEEEEcCCCCCCCE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP---LPTIKWFRED--FPI------------TSSPDFQIHTFSTKSILIMRQVFMEDSG 202 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p---~~~~~W~k~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G 202 (283)
+....+..|+.+.|.|.+.+.| .+.+.|+|++ ..+ ....++.+........|.|.++..+|+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G 86 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSLIGDKAALTITGAQTEDEA 86 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGGCE
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEeeCCEEEEEECCCCccCCE
Confidence 6778899999999999999876 4789999863 221 1124566655666778999999999999
Q ss_pred EEEEEEEeCCceeE-EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC--eeEEeeCCEEecC
Q psy14060 203 VFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL--DVYWLKVSSLSDV 279 (283)
Q Consensus 203 ~Y~C~a~n~~g~~~-~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~--~v~W~~~g~~l~~ 279 (283)
.|.|.+.|..+... ....|.|.... ..+|.+...+....+..|+.++|.|.+.|.+++ .|.|++||+.+..
T Consensus 87 ~Y~C~~~~~~~~~~~~~~~l~V~~~~------~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~ 160 (212)
T 1q0x_L 87 IYFCALWSNNKLVFGGGTKLTVLGQP------KSSPTVTLFPPSSEELSTAKATLVCTITDFYPGVVTVDWKVDGTPVTA 160 (212)
T ss_dssp EEEEEEECSSCEEECCCEEEEECCSC------CBCCEEEEECCCHHHHTTTEEEEEEEEEEEBSSCCEEEEEETTEEECT
T ss_pred EEEEEEecCchhhcCCCeEEEEecCC------CCCCeeEEeCCCHHHccCCcEEEEEEEEEEeCCCeEEEEEECCEeCCC
Confidence 99999999876422 22455554210 036776665444445679999999999986544 8999999998854
No 239
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.71 E-value=7.1e-16 Score=119.29 Aligned_cols=120 Identities=13% Similarity=0.144 Sum_probs=94.2
Q ss_pred eeecCCCcEEEEEEEeeecCC--EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEE
Q psy14060 143 CRAFEQDQARFEVEFDGDPLP--TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSAN 220 (283)
Q Consensus 143 ~~~~~g~~v~l~C~~~g~p~~--~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 220 (283)
..+..|++++|.|.+ +.|.| .|.|++.+..+ .+ .........|.|.+++.+|.|.|.|.+.|..+.....+.
T Consensus 17 v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l---~~--~~~~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ 90 (210)
T 1gsm_A 17 VAVALGASRQLTCRL-ACADRGASVQWRGLDTSL---GA--VQSDTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQ 90 (210)
T ss_dssp EEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT---CC--EEEESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEE
T ss_pred eEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc---Cc--EEecCCccEEEECccCcccCceEEEEEEeCCCceEEEEE
Confidence 588999999999999 88888 99999965433 12 222345678999999999999999999999988888899
Q ss_pred EEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CC----CeeEEeeCCEEecCC
Q psy14060 221 LVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KP----LDVYWLKVSSLSDVK 280 (283)
Q Consensus 221 l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~----~~v~W~~~g~~l~~~ 280 (283)
|.|.. +|........ .+..|+.+ |.|.+.|. |. ++|+|+|||++|...
T Consensus 91 ltV~~----------~P~~~~i~~~-~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~ 143 (210)
T 1gsm_A 91 LLVYA----------FPNQLTVSPA-ALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGA 143 (210)
T ss_dssp EEEEB----------CCSEEEEESS-SBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTC
T ss_pred EEEEe----------cCCCcEEccc-eEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccc
Confidence 99985 4544332222 56678888 99999985 63 489999999999654
No 240
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.71 E-value=1.4e-16 Score=125.96 Aligned_cols=163 Identities=9% Similarity=0.079 Sum_probs=101.4
Q ss_pred eeecCcEEEEEEEccCc----cceEEeec-------------------------CCCEEEEEc--CCEEEEEEccCCCCC
Q psy14060 60 IHTAKSQQVQKEKKGDK----EIVRKITA-------------------------TETTEMEHK--GKIQERVVDASELDD 108 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~----~i~~~~~~-------------------------~~~~~~~~~--~~~~~L~i~~~~~~D 108 (283)
+.+|++++|.|.+.+.+ .+ .|... ..|+.+..+ .+..+|.|.+++.+|
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v-~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (227)
T 1mju_H 12 VKPGASVKLSCKASGYTFTNYWI-NWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSSLTSDD 90 (227)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCE-EEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EcCCCCEEEEEEecCCccccceE-EEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECCCCccc
Confidence 66788999999998764 22 22211 235555432 357899999999999
Q ss_pred CeEEEEEEEeccee--eeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCCCe
Q psy14060 109 DGYYAITERKYYAL--SDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSPDF 180 (283)
Q Consensus 109 ~G~Y~C~a~n~~~~--~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~~~ 180 (283)
+|.|.|.+.+.... .....+.+ ..+|.+........+..|+.++|.|.+.|. |.+ .+.|++++..+......
T Consensus 91 ~G~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~~~ 170 (227)
T 1mju_H 91 SAVYYCANKLGWFPYWGQGTLVTVSAAKTTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHTFP 170 (227)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECSSCCBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC
T ss_pred CEEEEEEECCCCceEEcCcEEEEEcCCCCCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEecCCCcCCcEECC
Confidence 99999999886321 11112222 234555443333346679999999999986 766 99999998764211000
Q ss_pred EEEEeC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 181 QIHTFS---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 181 ~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
.+...+ ..+.|.|.....+| |.|+|.+.|..+.......+.+.
T Consensus 171 ~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~~~~~~~~~ 216 (227)
T 1mju_H 171 AVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTKVDKKIEPR 216 (227)
T ss_dssp CEEETTEEEEEEEEEECTTTTTT-SCCEEEEEEGGGTEEEEEECCCC
T ss_pred ceecCCeEEEEEEEEEchhhcCC-CeEEEEEEECCCCcceEEEeCCC
Confidence 011111 13468999988878 99999999987665555555443
No 241
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.71 E-value=5.8e-16 Score=121.73 Aligned_cols=156 Identities=10% Similarity=0.077 Sum_probs=103.6
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|++++|.|.+.+.+ .+. |.. ...|+.+... .+..+|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~-W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 89 (220)
T 2fbj_H 11 LVQPGGSLKLSCAASGFDFSKYWMS-WVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKVRSE 89 (220)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEE-EEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSCCGG
T ss_pred EecCCCcEEEEEEecCccCCCceEE-EEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCCChh
Confidence 466788999999998754 222 211 1245665542 45789999999999
Q ss_pred CCeEEEEEEEeccee----eeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeee-cC--CEEEEEeCCEecCC
Q psy14060 108 DDGYYAITERKYYAL----SDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL--PTIKWFREDFPITS 176 (283)
Q Consensus 108 D~G~Y~C~a~n~~~~----~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~--~~~~W~k~~~~~~~ 176 (283)
|+|.|.|.+.+..+. .....+.+ ..+|.+.... ...+..|+.+.|.|.+.+. |. +.+.|++++..+..
T Consensus 90 DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W~~~~~~~~~ 168 (220)
T 2fbj_H 90 DTALYYCARLHYYGYNAYWGQGTLVTVSAESARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTWGKSGKDITT 168 (220)
T ss_dssp GCEEEEEEEEETTTEEEEECCCEEEEECSSCCBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEESCCCSSCEE
T ss_pred hCEEEEEEEeccccccceecCCEEEEecCCCCCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEEecCCEecce
Confidence 999999999886431 11112222 2355555443 3456789999999999987 66 68999999876411
Q ss_pred -CCCeEEEEeCC---EEEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 177 -SPDFQIHTFST---KSILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 177 -~~~~~~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
.........+. .+.|.|......|.|.|+|.+.|..+...
T Consensus 169 ~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~ytC~v~n~~~~~~ 212 (220)
T 2fbj_H 169 VNFPPALASGGRYTMSNQLTLPAVECPEGESVKCSVQHDSNPVQ 212 (220)
T ss_dssp EECCCEECSSSCEEEEEEEEECGGGSCTTCEEEEEEEETTSCCE
T ss_pred EecCceECCCCCEEEEEEEEECHHHcCCCCeEEEEEEcCCCceE
Confidence 00000101111 23588988888999999999999987644
No 242
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.71 E-value=3.9e-17 Score=128.29 Aligned_cols=137 Identities=9% Similarity=-0.027 Sum_probs=99.1
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEE--EEEEcCCCCCCCEEEEEEE
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKS--ILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~--~l~i~~~~~~d~G~Y~C~a 208 (283)
..+|.+...+. ..+..|++++|.|.+.+ +.+.+.|+|++..+..... ......... .|.|.++..+|+|.|+|.+
T Consensus 7 ~~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~~~-~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 83 (218)
T 1uct_A 7 FPMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYREIG-RRLKFWNETDPEFVIDHMDANKAGRYQCQY 83 (218)
T ss_dssp SCCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEECS-EECC----CCCEEEECSCCGGGCEEEEEEE
T ss_pred CCCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccccc-ccCCCCcceeeEEEEcccccccCEEEEEEE
Confidence 45677777666 57899999999999987 7889999999765432111 110111223 6999999999999999999
Q ss_pred EeCCceeE--EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 209 ENRGGKAK--CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 209 ~n~~g~~~--~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
.|..+... ..+.|.|.... .+|.+...+ ...+.+|+.++|.|.+.+.|.+.+.|+|+|..+.
T Consensus 84 ~n~~~~~~~s~~~~l~V~~~~-------~~P~i~~~p-~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~~~ 147 (218)
T 1uct_A 84 RIGHYRFRYSDTLELVVTGLY-------GKPFLSADR-GLVLMPGENISLTCSSAHIPFDRFSLAKEGELSL 147 (218)
T ss_dssp EETTTEEEECCCEEEEEECSS-------CCCEEEESS-CSEECTTCCCEEEEECSSSCCSEEEEEETTCSSC
T ss_pred EcCCCceeecCCEEEEEcCcc-------cCCEEEeCC-CCccCCCCCEEEEEeCCCCCCCEEEEEECCCccc
Confidence 99876433 33566666421 256665544 5678999999999977777788999999998664
No 243
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.71 E-value=2.9e-17 Score=129.16 Aligned_cols=162 Identities=10% Similarity=0.024 Sum_probs=109.1
Q ss_pred eeecCcEEEEEEEcc-Cc--c-c--eEEeec-------------------CCCEEEEE-----cCCEEEEEEccCCCCCC
Q psy14060 60 IHTAKSQQVQKEKKG-DK--E-I--VRKITA-------------------TETTEMEH-----KGKIQERVVDASELDDD 109 (283)
Q Consensus 60 v~~g~~v~l~C~~~g-~~--~-i--~~~~~~-------------------~~~~~~~~-----~~~~~~L~i~~~~~~D~ 109 (283)
+.+|++++|.|.+.+ .+ . . ..|... ..++.+.. ..+..+|.|.+++.+|+
T Consensus 11 ~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~~~D~ 90 (221)
T 3eow_R 11 GFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLRVEDE 90 (221)
T ss_dssp CCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSSCCCC
T ss_pred EEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCChHHC
Confidence 567889999999954 32 3 2 133332 23344332 12456899999999999
Q ss_pred eEEEEEEEecc-e-eeeeeccCCCCCCeEEecCCceeecCCCcE-EEEEEEe-eecCCEEEEEeCCEecCCCCCeEEEEe
Q psy14060 110 GYYAITERKYY-A-LSDLSEQKPAKPPVFTKKIQPCRAFEQDQA-RFEVEFD-GDPLPTIKWFREDFPITSSPDFQIHTF 185 (283)
Q Consensus 110 G~Y~C~a~n~~-~-~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v-~l~C~~~-g~p~~~~~W~k~~~~~~~~~~~~~~~~ 185 (283)
|.|+|.+.+.. + ......+.+..+|.+........ ..|+.+ .|.|.+. +.|.|.++|++++..............
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~L~V~~~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~ 169 (221)
T 3eow_R 91 GSYTCLFVTFPQGSRSVDIWLRVLAKPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDLGGMPQTSQVPGFLS 169 (221)
T ss_dssp SCBEEEEEESSSCSCEEECCCCCCCCCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSSSCCCCCEEECCCCB
T ss_pred eEEEEEEEeCCCCceEEEEEEEEEECCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCCCCCCccceeecCCC
Confidence 99999999865 3 34455667777887765433333 677888 5999987 789999999987543321110000001
Q ss_pred ---CCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEE
Q psy14060 186 ---STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLV 222 (283)
Q Consensus 186 ---~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 222 (283)
...+.|.|..+..+|.|.|+|.|.|..+.......+.
T Consensus 170 ~~~~~~s~L~i~~~~~~d~g~ytC~a~n~~~~~~~~~~v~ 209 (221)
T 3eow_R 170 GTVTVTSLWILVPSSQVDGKQVTCKVEHESFEKPQLLTVS 209 (221)
T ss_dssp TTBCCEEEEECCCCSCCCCCCEEEEECCSCSSSCEEEEEC
T ss_pred CcEEEEEEEEEeCCHHHCCCeEEEEEECCCCCCCeEEEEE
Confidence 1245799999999999999999999887766555544
No 244
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.71 E-value=1.4e-15 Score=119.75 Aligned_cols=159 Identities=11% Similarity=0.106 Sum_probs=103.3
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|++++|.|.+.+.+ .+. |.. ...|+.+..+ .+..+|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~-W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (223)
T 1dee_B 11 VVQPGKSLRLSCAASGFTFSGYGMH-WVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLRAE 89 (223)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEE-EEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EEcCCCcEEEEEEecCcccCCceEE-EEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCCHH
Confidence 467788999999998754 222 211 1245555432 34789999999999
Q ss_pred CCeEEEEEEEecce-------eeeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEe-CCEe
Q psy14060 108 DDGYYAITERKYYA-------LSDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFR-EDFP 173 (283)
Q Consensus 108 D~G~Y~C~a~n~~~-------~~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k-~~~~ 173 (283)
|+|.|.|.+.+..+ ......+.+ ..+|.+........+..|+.+.|.|.+.+. |.+ .+.|++ ++..
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~g~~ 169 (223)
T 1dee_B 90 DTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGSASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITFSWKYKNNSD 169 (223)
T ss_dssp GCEEEEEEEESSSSTTCCEEEECCCEEEEECSSCCBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEEEEEETTSCB
T ss_pred HCEEEEEEEeccccCcccceeecCcEEEEEccCCCCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEEEeEccCCCc
Confidence 99999999988631 111112222 234555432222345789999999999987 776 999999 8877
Q ss_pred cCCCCCe-EEEEeC---CEEEEEEcCCCC--CCCEEEEEEEEeCCceeEEE
Q psy14060 174 ITSSPDF-QIHTFS---TKSILIMRQVFM--EDSGVFAVIAENRGGKAKCS 218 (283)
Q Consensus 174 ~~~~~~~-~~~~~~---~~~~l~i~~~~~--~d~G~Y~C~a~n~~g~~~~~ 218 (283)
+.....+ .....+ ..+.|.|..... +|.|.|+|.+.|..+.....
T Consensus 170 l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~y~C~v~n~~~~~~~~ 220 (223)
T 1dee_B 170 ISSTRGFPSVLRGGKYAATSQVLLPSKDVAQGTNEHVVCKVQHPNGNKEKD 220 (223)
T ss_dssp CSCEEECCCEEETTEEEEEEEEEEECTTTTSTTCCEEEEEEECTTCCEEEE
T ss_pred cceeEECCccccCCeEEEEEEEEEcHHHhccCCCCEEEEEEEeCCCCCccc
Confidence 6530000 000111 124588877776 78999999999998775543
No 245
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.70 E-value=5.3e-17 Score=127.13 Aligned_cols=162 Identities=9% Similarity=0.043 Sum_probs=97.1
Q ss_pred eeeecCcEEEEEEEccCc----cce----------EEe-------------ecCCCEEEEEcCCEEEEEEccCCCCCCeE
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIV----------RKI-------------TATETTEMEHKGKIQERVVDASELDDDGY 111 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~----------~~~-------------~~~~~~~~~~~~~~~~L~i~~~~~~D~G~ 111 (283)
.+.+|++++|.|.+.+.+ .+. ..+ ....++.+...+....|.|.+++.+|+|.
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 89 (215)
T 3nl4_H 10 LVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTTEDTAT 89 (215)
T ss_dssp EECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCGGGCEE
T ss_pred EEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCcccCEE
Confidence 466788999999997632 222 111 12356666666678899999999999999
Q ss_pred EEEEEEecce-----eee--eecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeeecC--CEEEEEeCCEecCCCCCe
Q psy14060 112 YAITERKYYA-----LSD--LSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPL--PTIKWFREDFPITSSPDF 180 (283)
Q Consensus 112 Y~C~a~n~~~-----~~~--~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~~~W~k~~~~~~~~~~~ 180 (283)
|.|.+.+..+ ... ...+ ....+|.+........+..|+.+.|.|.+.+.++ ..+.|++++..+......
T Consensus 90 Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~~g~~~~~~~~~ 169 (215)
T 3nl4_H 90 YFCVRKYGSEWGGDLWGPGTLVTVSSGQPKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNSGTLTNGVRTFP 169 (215)
T ss_dssp EEEEEECSSSSCEEEECCCEEEEECSSCCBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGGGTBCTTEEECC
T ss_pred EEEEEecCCCccceEEcCCEEEEEeCCCcCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEeeCCEECCeEecC
Confidence 9999988732 111 1112 2234666654444445667999999999998643 468899998754321111
Q ss_pred EEEE-eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEE
Q psy14060 181 QIHT-FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANL 221 (283)
Q Consensus 181 ~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 221 (283)
.... .+.........+...| |.|+|.+.|..+.......+
T Consensus 170 ~~~~~~g~~~~~s~l~v~~~d-g~ytC~v~~~~~~~~~~~~l 210 (215)
T 3nl4_H 170 SVRQSSGLYSLSSVVSVTSSS-QPVTCNVAHPATNTKVDKTV 210 (215)
T ss_dssp CEECTTSCEEEEEEEEECC----CCEEEEEEGGGTEEEEEEC
T ss_pred ceECCCCCEEEEEEEEEeccC-CEEEEEEEeCCCCcceEEec
Confidence 1111 1111111112344556 99999999998876555444
No 246
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.70 E-value=1.1e-16 Score=123.41 Aligned_cols=142 Identities=11% Similarity=0.039 Sum_probs=92.2
Q ss_pred eeecCcEEEEEEEccCc---cceEEeecC------------------------CCEEEEEcCCEEEEEEccCCCCCCeEE
Q psy14060 60 IHTAKSQQVQKEKKGDK---EIVRKITAT------------------------ETTEMEHKGKIQERVVDASELDDDGYY 112 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~---~i~~~~~~~------------------------~~~~~~~~~~~~~L~i~~~~~~D~G~Y 112 (283)
+.+|++|+|.|.+.+.+ .+ .|...+ .|+.+. ...+|.|.+++.+|+|.|
T Consensus 10 ~~~G~~v~L~C~~~~~~~~~~v-~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~D~G~Y 85 (193)
T 2if7_A 10 GILGESVTLPLEFPAGEKVNFI-TWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKMEDTGSY 85 (193)
T ss_dssp EETTSCEEECCCCCCCSCCCEE-EEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGGGCEEE
T ss_pred EEecCeEEEeccCCCcccccEE-EEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCcccCceE
Confidence 56788999999987533 23 222211 122222 246799999999999999
Q ss_pred EEEEEeccee-eeeeccCCCCC---CeEEecCCceeecCCC-cEEEEEEEeee-cCCEEEEEeCCEecCCCCCeEEEEeC
Q psy14060 113 AITERKYYAL-SDLSEQKPAKP---PVFTKKIQPCRAFEQD-QARFEVEFDGD-PLPTIKWFREDFPITSSPDFQIHTFS 186 (283)
Q Consensus 113 ~C~a~n~~~~-~~~~~~~~~~~---p~~~~~~~~~~~~~g~-~v~l~C~~~g~-p~~~~~W~k~~~~~~~~~~~~~~~~~ 186 (283)
+|.+.+..+. .....+.+..+ |.+.... .....|. .+.|.|.+.+. |.|.+.|++++..+....
T Consensus 86 ~C~~~~~~~~~~~~~~L~V~~~~~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~~~~-------- 155 (193)
T 2if7_A 86 RAQISTKTSAKLSSYTLRILRQLRNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLSSQP-------- 155 (193)
T ss_dssp EEEEECSSCEEEEEEEEEEECCCEEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEESSS--------
T ss_pred EEEEEecCCCeEEEEEEEEEccCCCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcCCCC--------
Confidence 9999988763 22223333333 3333222 1223455 79999999985 579999999998764322
Q ss_pred CEEEEEEcCCCC-CCCEEEEEEEEeCCceeEEE
Q psy14060 187 TKSILIMRQVFM-EDSGVFAVIAENRGGKAKCS 218 (283)
Q Consensus 187 ~~~~l~i~~~~~-~d~G~Y~C~a~n~~g~~~~~ 218 (283)
.|.|..... .|.|.|+|.|.|..|..+..
T Consensus 156 ---~l~i~~~~~~~d~G~Y~C~a~N~~g~~s~~ 185 (193)
T 2if7_A 156 ---NLTVSWDPRISSEQDYTCIAENAVSNLSFS 185 (193)
T ss_dssp ---EEEEEECTTTCSCCEEEEEEEETTEEEEEE
T ss_pred ---eEEEEeccCcCCCCcEEEEEECCCCccccc
Confidence 255543344 38999999999999887543
No 247
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.70 E-value=7.1e-17 Score=130.94 Aligned_cols=166 Identities=14% Similarity=0.072 Sum_probs=93.6
Q ss_pred CCCCCCeEEEEEEEecceeeeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--Eec-------
Q psy14060 104 SELDDDGYYAITERKYYALSDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FPI------- 174 (283)
Q Consensus 104 ~~~~D~G~Y~C~a~n~~~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~~------- 174 (283)
..+.|.+.|.|.+.+..+.... .....+...+....+..|++++|.|.+.+ +.+.+.|||.. ...
T Consensus 3 ~~~~~~~~y~~~~~~~~g~~~~-----~~~~~v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~ 76 (270)
T 3qib_D 3 NERADLIAYLKQATKGGGGSGG-----GGGMKVIQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQ 76 (270)
T ss_dssp ------------------------------CCCEEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEE
T ss_pred chhhhHHHHHHHHhccCCcccc-----ccceeEEeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEEC
Confidence 4578999999999887663321 12233455566788999999999999866 77899999831 110
Q ss_pred -----CCC---C-CeEEEE-eCCEEEEEEcCCCCCCCEEEEEEEEeCCc----eeEEEEEEEEEeccCCCCCCCCCCeEE
Q psy14060 175 -----TSS---P-DFQIHT-FSTKSILIMRQVFMEDSGVFAVIAENRGG----KAKCSANLVVEEKRQGGRGGVVPPSFL 240 (283)
Q Consensus 175 -----~~~---~-~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g----~~~~~~~l~v~~~~~~~~~~~~~p~~~ 240 (283)
... . ++.+.. .....+|.|.++..+|+|.|+|.+.+... .......|.|.... ....+|.+.
T Consensus 77 ~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~----~~~~~P~v~ 152 (270)
T 3qib_D 77 NQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDL----KNVFPPEVA 152 (270)
T ss_dssp TTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCS----TTCBCCEEE
T ss_pred CCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEcccc----ccccCCceE
Confidence 000 0 333322 22356899999999999999999986432 22233456666410 001245544
Q ss_pred e-cCCceEEcCCCeEEEEEEEEe-eCCC-eeEEeeCCEEecC
Q psy14060 241 T-TISSAVINVGQLARFDAKISA-TKPL-DVYWLKVSSLSDV 279 (283)
Q Consensus 241 ~-~~~~~~v~~g~~v~L~C~~~g-~p~~-~v~W~~~g~~l~~ 279 (283)
. .+....+..|+.++|.|.+.| .|.+ .+.|++||+.+..
T Consensus 153 ~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~ 194 (270)
T 3qib_D 153 VFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHS 194 (270)
T ss_dssp EEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECT
T ss_pred EECCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCC
Confidence 3 333445567999999999998 5666 7999999999864
No 248
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.70 E-value=4e-17 Score=123.77 Aligned_cols=125 Identities=17% Similarity=0.115 Sum_probs=96.0
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCC-EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
.+|.+...+....+.+|+++.|.|.+.+.+.+ .+.|++++..+... ...|.|.++..+|+|.|+|.+.|
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~~~~~~~----------~~~L~i~~v~~~d~G~Y~C~~~~ 72 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNGSLSEET----------NSSLNIVNAKFEDSGEYKCQHQQ 72 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETTEECSCC----------SSEEEECSCCGGGCEEEEEECTT
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECCeECCCC----------ceEEEEeccceecCEEEEEEcCC
Confidence 46777777787889999999999999887775 69999999987643 34699999999999999999988
Q ss_pred CCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEE-eeCCCeeEEeeCCEEecC
Q psy14060 211 RGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKIS-ATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 211 ~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~-g~p~~~v~W~~~g~~l~~ 279 (283)
..+.. ...|.|.. ++.+... ....+.+|+.+.|.|.+. +.|.+.+.|++||+.+..
T Consensus 73 ~~~s~--~~~l~V~~----------~~~~~~~-~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~ 129 (176)
T 1f2q_A 73 VNESE--PVYLEVFS----------DWLLLQA-SAEVVMEGQPLFLRCHGWRNWDVYKVIYYKDGEALKY 129 (176)
T ss_dssp SSCCC--CEEEEEEC----------SSEEEEE-SCSEEETTSCEEEEEEEGGGCCEEEEEEEETTEECCS
T ss_pred ccccc--cEEEEEeC----------cceeecC-CcceeeCCCCEEEEEEecCCCCceEEEEEECCEEEee
Confidence 66543 45566652 3443333 346788999999999994 566679999999998854
No 249
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.70 E-value=1e-17 Score=132.70 Aligned_cols=155 Identities=8% Similarity=-0.019 Sum_probs=85.8
Q ss_pred eeeecCcEEEEEEEccCccce-EEeec--------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKITA--------------------TETTEMEHKGKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~~--------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|++++|.|.+.+.+... .|... ..++.....+....|.|.+++.+|+|.|.|.+.
T Consensus 34 ~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 113 (233)
T 3bqu_C 34 SMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLSEDVADYYCLQS 113 (233)
T ss_dssp -------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----CCCCSEEEEEEC
T ss_pred EEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCHHHCEEEEEEEe
Confidence 367888999999998876221 33221 123333223345689999999999999999998
Q ss_pred eccee--eeeeccCCC---CCCeEEecCCceeecCCCcEEEEEEEeeec-CC-EEEEEeCCEecCCCCCeE--EEEeC--
Q psy14060 118 KYYAL--SDLSEQKPA---KPPVFTKKIQPCRAFEQDQARFEVEFDGDP-LP-TIKWFREDFPITSSPDFQ--IHTFS-- 186 (283)
Q Consensus 118 n~~~~--~~~~~~~~~---~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p-~~-~~~W~k~~~~~~~~~~~~--~~~~~-- 186 (283)
|..+. .....+.+. .+|.+...+.......|+.++|.|.+.|.+ .+ .+.|+|++..+....... .....
T Consensus 114 ~~~~~~~~~~~~l~V~~~~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~ 193 (233)
T 3bqu_C 114 DNLPYTFGGGTNLEIKRADAAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGSERQNGVLNSWTDQDSKDS 193 (233)
T ss_dssp SSSSCCBCCCCBC---CCCBCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC-----CCEEEEECCCCTTTC
T ss_pred cCCceeecCCEEEEEeCCCCCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCeeCCCCceEecCCccCCCC
Confidence 87542 112223332 256665544443445789999999999864 43 799999998765430000 00000
Q ss_pred ---CEEEEEEcCCCCCCCEEEEEEEEeCCc
Q psy14060 187 ---TKSILIMRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 187 ---~~~~l~i~~~~~~d~G~Y~C~a~n~~g 213 (283)
..+.|.|.....+|.|.|+|.|.|...
T Consensus 194 ~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~ 223 (233)
T 3bqu_C 194 TYSMSSTLTLTKDEYERHNSYTCEATHKTS 223 (233)
T ss_dssp CEEEEEEEEEEHHHHHTCCCEEEEEEEC--
T ss_pred CEEEEEEEEECHHHhCCCCCEEEEEEeCCC
Confidence 124688888888999999999998753
No 250
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.70 E-value=3.7e-16 Score=127.47 Aligned_cols=152 Identities=11% Similarity=0.079 Sum_probs=104.8
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEE--EcCCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEME--HKGKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~--~~~~~~~L~i~~~~~~ 107 (283)
.+.+|++|+|.|.+.+.. .+ .|.. ...++.+. ......+|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (280)
T 3fku_X 11 VKKPGSSVKVSCTSSEVTFSSFAI-SWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSLRSE 89 (280)
T ss_dssp EECTTCCEEEEEEECCSCCTTSCE-EECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSCCST
T ss_pred EECCCCcEEEEEEeeccCCCCeEE-EEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCCChh
Confidence 366788999999998742 22 2211 11355555 3455689999999999
Q ss_pred CCeEEEEEEEecc---------e-eeeeeccCCCC---------------CCeEEecCCceeecCCCcEEEEEEEee-ec
Q psy14060 108 DDGYYAITERKYY---------A-LSDLSEQKPAK---------------PPVFTKKIQPCRAFEQDQARFEVEFDG-DP 161 (283)
Q Consensus 108 D~G~Y~C~a~n~~---------~-~~~~~~~~~~~---------------~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p 161 (283)
|+|.|.|.+.+.. . ......+.+.. ++.+...+. ..+.+|++++|.|.+.+ .+
T Consensus 90 DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~~~~ 168 (280)
T 3fku_X 90 DTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNSNNV 168 (280)
T ss_dssp TCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCCCCC
T ss_pred hCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecCCCC
Confidence 9999999998861 1 11111222222 444444444 78899999999999987 44
Q ss_pred -CCEEEEEeC--CEecC------------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCC
Q psy14060 162 -LPTIKWFRE--DFPIT------------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 162 -~~~~~W~k~--~~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
.+.+.|||. +..+. ...++.+........|.|.++..+|+|.|+|.+.+..
T Consensus 169 ~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~~ 234 (280)
T 3fku_X 169 GNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASRSGNTASLTITGLQPEDEADYYCSTWDSS 234 (280)
T ss_dssp CTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEEETTEEEEEECSCCGGGCSEEEEEEEETT
T ss_pred CCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEccCCEEEEEECCCCHHHCEEEEEEEecCC
Confidence 478999983 22111 1245666666677789999999999999999999876
No 251
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.69 E-value=3.7e-16 Score=123.51 Aligned_cols=160 Identities=9% Similarity=0.098 Sum_probs=101.2
Q ss_pred eeeecCcEEEEEEEccCcc----ce-EEee------------------------cCCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDKE----IV-RKIT------------------------ATETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~----i~-~~~~------------------------~~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|++++|.|.+.+.+. .. .|.. ...|+.+... .+...|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 90 (228)
T 3bae_H 11 LLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITSVDTA 90 (228)
T ss_dssp EECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECSCCGG
T ss_pred eecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcCCCcc
Confidence 4677889999999987651 22 2221 1235555432 34689999999999
Q ss_pred CCeEEEEEEEecce----------eeeeeccCCC----CCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCC
Q psy14060 108 DDGYYAITERKYYA----------LSDLSEQKPA----KPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFRED 171 (283)
Q Consensus 108 D~G~Y~C~a~n~~~----------~~~~~~~~~~----~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~ 171 (283)
|+|.|.|.+.+..+ ......+.+. .+|.+........+..|+.+.|.|.+.+. |.+ .+.|++++
T Consensus 91 D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~p~~v~W~~~~ 170 (228)
T 3bae_H 91 DTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGS 170 (228)
T ss_dssp GCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCCCBCCEEEEECC-----CCSEEEEEEEEEEEBSSCCEEEEGGGT
T ss_pred cCEEEEEEEecCCCccccccceeeeCCcEEEEecCCCCCCCEEEEecccccccCCCCEEEEEEEccEeCCCEEEEEeeCC
Confidence 99999999987642 1111222222 35555543333446789999999999986 777 99999988
Q ss_pred EecCCCCCeEEEEeC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE
Q psy14060 172 FPITSSPDFQIHTFS---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 172 ~~~~~~~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 219 (283)
..+.......+...+ ..+.|.|......| |.|+|.+.|..+......
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~d~-g~YtC~~~n~~~~~~~~~ 220 (228)
T 3bae_H 171 LSSGVHTFPAVLQSDLYTLSSSVTVTSSTWPS-ESITCNVAHPASSTKVDK 220 (228)
T ss_dssp CCTTEEEEEEEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEEEEE
T ss_pred cccCceEcCceeCCCcEEEEEEEEEEhhhcCC-CcEEEEEEECCCCCCEEE
Confidence 653211111111111 13468898888766 999999999987755433
No 252
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.69 E-value=5.6e-17 Score=131.53 Aligned_cols=188 Identities=14% Similarity=0.107 Sum_probs=99.9
Q ss_pred ccCcceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCccceEEee--cC--------
Q psy14060 16 KKNILKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKIT--AT-------- 85 (283)
Q Consensus 16 ~~~~~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~i~~~~~--~~-------- 85 (283)
.+-+.+.|+|+|..|.......+.|... |.. ..+.+|++++|.|.+.+......|.. ..
T Consensus 6 ~~~~~y~~~~~~~~g~~~~~~~~~v~~~------p~~-----v~v~~G~~v~L~C~~~~~~~~v~W~k~~~~~~~~~~~~ 74 (270)
T 3qib_D 6 ADLIAYLKQATKGGGGSGGGGGMKVIQT------PRY-----LVKGQGQKAKMRCIPEKGHPVVFWYQQNKNNEFKFLIN 74 (270)
T ss_dssp ----------------------CCCEEE------CSE-----EEEETTSCEEEEEECCTTCCEEEEEEECTTCCEEEEEE
T ss_pred hhHHHHHHHHhccCCccccccceeEEeC------CCe-----EEEcCCCCEEEEEEecCCCceEEEEEECCCCCcEEEEE
Confidence 3456778999998887554432222221 111 13677889999999876432112221 00
Q ss_pred -------------C-CEEEEE-cCCEEEEEEccCCCCCCeEEEEEEEecce-----ee---eeecc---CCCCCCeEEe-
Q psy14060 86 -------------E-TTEMEH-KGKIQERVVDASELDDDGYYAITERKYYA-----LS---DLSEQ---KPAKPPVFTK- 138 (283)
Q Consensus 86 -------------~-~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~-----~~---~~~~~---~~~~~p~~~~- 138 (283)
. ++.+.. .....+|.|.+++.+|+|.|.|.+.+... .. .+... ....+|.+..
T Consensus 75 ~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~ 154 (270)
T 3qib_D 75 FQNQEVLQQIDMTEKRFSAECPSNSPCSLEIQSSEAGDSALYLCASSLNWSQDTQYFGPGTRLLVLEDLKNVFPPEVAVF 154 (270)
T ss_dssp EETTEEEEECHHHHHHEEEECCTTSCEEEEESSCCGGGCEEEEEEEESCTTCCCCEECCCEEEEEESCSTTCBCCEEEEE
T ss_pred ECCCCceecCCccCCcEEEEeCCCcEEEEEECCCCHhHCeEEEEEEecCCCccceEECCcEEEEEccccccccCCceEEE
Confidence 0 444432 23468999999999999999999986321 11 11111 1222555443
Q ss_pred cCCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCCCCeE---EE-----EeCC---EEEEEEcCCCCCC-CEEE
Q psy14060 139 KIQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSSPDFQ---IH-----TFST---KSILIMRQVFMED-SGVF 204 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~~~~~---~~-----~~~~---~~~l~i~~~~~~d-~G~Y 204 (283)
.+....+..|+.++|.|.+.+ .|.+ .+.|+++|..+....... .. ..+. .+.|.|.....+| .|.|
T Consensus 155 ~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~g~Y 234 (270)
T 3qib_D 155 EPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHF 234 (270)
T ss_dssp ECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEECSSCEESCTTSSSCCEEEEEEEEEEHHHHHSTTCEE
T ss_pred CCCccccccCCceEEEEEecceeCCCeEEEEEECCEECCCCcccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeE
Confidence 334445556899999999998 5666 899999999886421100 00 0011 1357777777777 9999
Q ss_pred EEEEEeCCce
Q psy14060 205 AVIAENRGGK 214 (283)
Q Consensus 205 ~C~a~n~~g~ 214 (283)
+|.+.|....
T Consensus 235 tC~v~~~~l~ 244 (270)
T 3qib_D 235 RCQVQFYGLS 244 (270)
T ss_dssp EEEEEECCBC
T ss_pred EEEEEecCCC
Confidence 9999987643
No 253
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.69 E-value=3.1e-16 Score=125.30 Aligned_cols=156 Identities=12% Similarity=0.084 Sum_probs=102.1
Q ss_pred eeeecCcEEEEEEEccCccce-EEee-------------------------cCCCEEEEE-cCCEEEEEEccCCCCCCeE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT-------------------------ATETTEMEH-KGKIQERVVDASELDDDGY 111 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~-------------------------~~~~~~~~~-~~~~~~L~i~~~~~~D~G~ 111 (283)
.+.+|+.++|.|.+.+.+... .|.. ...++.+.. .....+|.|.+++.+|+|.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G~ 91 (246)
T 4dzb_B 12 ISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSF 91 (246)
T ss_dssp EEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECSCCGGGCEE
T ss_pred EEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECCCCHHHCEE
Confidence 366788999999999877221 2222 014555543 2457899999999999999
Q ss_pred EEEEEEecce-----eeeeeccC------CCCCCeEE-ecCCceeecCCCcEEEEEEEeeecCC--EEEEEeCCEecCCC
Q psy14060 112 YAITERKYYA-----LSDLSEQK------PAKPPVFT-KKIQPCRAFEQDQARFEVEFDGDPLP--TIKWFREDFPITSS 177 (283)
Q Consensus 112 Y~C~a~n~~~-----~~~~~~~~------~~~~p~~~-~~~~~~~~~~g~~v~l~C~~~g~p~~--~~~W~k~~~~~~~~ 177 (283)
|.|.+.+..+ ......+. ...+|.+. ..+....+..|+.+.|.|.+.|.|++ .+.|++++..+...
T Consensus 92 Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~~~ 171 (246)
T 4dzb_B 92 YICSARTSGDFGEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG 171 (246)
T ss_dssp EEEEECCSSGGGCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred EEEEEecCCCCcceEEcCCEEEEEecCCCcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEEEEEECCEECCCC
Confidence 9999986532 11111111 12355543 33444456679999999999987654 89999999887643
Q ss_pred CCeEEEE--------eCC---EEEEEEcCCCCCC-CEEEEEEEEeCCce
Q psy14060 178 PDFQIHT--------FST---KSILIMRQVFMED-SGVFAVIAENRGGK 214 (283)
Q Consensus 178 ~~~~~~~--------~~~---~~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 214 (283)
....... .+. .+.|.|.....+| .|.|+|.+.|....
T Consensus 172 ~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~~~ 220 (246)
T 4dzb_B 172 VCTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 220 (246)
T ss_dssp EEECSSCEESSTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred cccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEecCCC
Confidence 1110000 111 1348888887778 99999999987644
No 254
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.69 E-value=2.1e-16 Score=124.75 Aligned_cols=156 Identities=8% Similarity=0.054 Sum_probs=100.6
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|++++|.|.+.+.+ .+ .|.. ...++.+..+ .+..+|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v-~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (225)
T 1op3_H 11 LVKAGGSLILSCGVSNFRISAHTM-NWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKMRVE 89 (225)
T ss_dssp EEETTCCEEEEEEEESSCGGGSCE-EEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGG
T ss_pred EecCCCCEEEEEEecCcccCCceE-EEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 477788999999998764 22 2211 1245555432 35789999999999
Q ss_pred CCeEEEEEEEecce---------eeeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCE
Q psy14060 108 DDGYYAITERKYYA---------LSDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDF 172 (283)
Q Consensus 108 D~G~Y~C~a~n~~~---------~~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~ 172 (283)
|+|.|.|.+.+..+ ......+.+ ..+|.+........+..|+.+.|.|.+.|. |.+ .+.|++++.
T Consensus 90 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 169 (225)
T 1op3_H 90 DTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSGAL 169 (225)
T ss_dssp GCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCSCBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCCEEECCTTSC
T ss_pred hCEEEEEEEecCCCccccccceeecCCEEEecccCCCcCCeEEEecccccccCCCcEEEEEEEEeEECCCeEEEEecCCC
Confidence 99999999988642 111112222 124544432222235679999999999986 766 999999987
Q ss_pred ecCCCCCeEEEEe-C---CEEEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 173 PITSSPDFQIHTF-S---TKSILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 173 ~~~~~~~~~~~~~-~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
.+.......+... + ..+.|.|......| |.|+|.|.|..+...
T Consensus 170 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~Y~C~a~n~~~~~~ 216 (225)
T 1op3_H 170 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 216 (225)
T ss_dssp CTTCEECCCEECTTSCEEEEEEEEEEGGGTTC-CCCCEEEEEGGGTEE
T ss_pred cCCeEecCceeCCCCCEEEEEEEEEechhcCC-CcEEEEEEcCCCCcc
Confidence 5321000001111 1 12358999888888 999999999765443
No 255
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.69 E-value=1.8e-16 Score=122.53 Aligned_cols=135 Identities=12% Similarity=0.118 Sum_probs=95.1
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.+...+. ..+.+|++++|.|.+.+.|. .+.|+|++..+...... .........|.|.++..+|+|.|+|.+.|.
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~~~~~~-~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 80 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKKTAPWITRI-PQELVKKGQFPIPSITWEHTGRYRCYYGSD 80 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSSCCHHHHTS-CHHHHTTTEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCccccccccc-cccCCcccEEEECCCCHHHCeEEEEEEECC
Confidence 4677776665 47889999999999988664 69999998866311000 000112346999999999999999999998
Q ss_pred C-ce--eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 212 G-GK--AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 212 ~-g~--~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
. +. .+..+.|.|.... .+|.+...+ ...+.+|+.++|.|.+.+. .+.+.|+++|..+.
T Consensus 81 ~~g~~~~s~~~~l~V~~~~-------~~p~i~~~~-~~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~~~~ 141 (198)
T 1ugn_A 81 TAGRSESSDPLELVVTGAY-------IKPTLSAQP-SPVVNSGGNVTLQCDSQVA-FDGFILCKEGEDEH 141 (198)
T ss_dssp TTEECCCCCCEEEEEECSS-------CCCEEEEES-CSEEETTCCEEEEEECSSC-CSEEEEEEC-----
T ss_pred CCCcccCCccEEEEEcccc-------cCCccccCC-ccccCCCCcEEEEEecCCC-CcEEEEEECCCccC
Confidence 7 53 3445677776521 245554443 4678899999999999987 78999999998763
No 256
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.69 E-value=4.3e-16 Score=124.99 Aligned_cols=140 Identities=14% Similarity=0.050 Sum_probs=100.8
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeec-----CCEEEEEeCCE--ec------------CCCCCeEEEEeCCEEEEEE
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDP-----LPTIKWFREDF--PI------------TSSPDFQIHTFSTKSILIM 193 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p-----~~~~~W~k~~~--~~------------~~~~~~~~~~~~~~~~l~i 193 (283)
.+.+...+....+..|++++|.|.+.+.+ .+.+.|||++. .+ ....++.+...+...+|.|
T Consensus 34 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I 113 (252)
T 3bkj_L 34 DVLMTQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSGSGTDFTLRI 113 (252)
T ss_dssp CCCEEEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEE
T ss_pred ccEEEeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEccCCEEEEEE
Confidence 34455556778899999999999999877 58899999641 11 1124566666666778999
Q ss_pred cCCCCCCCEEEEEEEEeCCceeE-EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeEE
Q psy14060 194 RQVFMEDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVYW 270 (283)
Q Consensus 194 ~~~~~~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W 270 (283)
.++..+|+|.|.|.+.|..+... ....|.|.... .+|.+...+....+..|+.++|.|.+.|. |.+ .|.|
T Consensus 114 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~-------~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 186 (252)
T 3bkj_L 114 SRVEAEDLGVYYCFQASLVPLTFGAGTKLELKRAD-------AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKW 186 (252)
T ss_dssp SSCCGGGCEEEEEEECSBSSCEECCCEEEEECCCC-------BCCEEEEECCCHHHHHHTEEEEEEEEEEEBSSCCEEEE
T ss_pred CCCCcccCEEEEEEEEcCCccEECCCEEEEEeCCC-------cCcEEEEeCCChhhcCCCcEEEEEEEeeEeCCCcEEEE
Confidence 99999999999999988765321 22456664321 35666654444344579999999999985 443 7999
Q ss_pred eeCCEEecC
Q psy14060 271 LKVSSLSDV 279 (283)
Q Consensus 271 ~~~g~~l~~ 279 (283)
++||+.+..
T Consensus 187 ~k~g~~~~~ 195 (252)
T 3bkj_L 187 KIDGSERQN 195 (252)
T ss_dssp EETTEEECS
T ss_pred EECCeecCC
Confidence 999998754
No 257
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.69 E-value=3.9e-16 Score=124.67 Aligned_cols=140 Identities=19% Similarity=0.168 Sum_probs=99.0
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCCEEEEEe----------------CCEecCCC---CCeEEEE-eCCEEEEEEcC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFR----------------EDFPITSS---PDFQIHT-FSTKSILIMRQ 195 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k----------------~~~~~~~~---~~~~~~~-~~~~~~l~i~~ 195 (283)
+...+....+.+|+.+.|.|.+.+.+.+.+.||| ++...... .++.+.. .....+|.|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~ 83 (246)
T 4dzb_B 4 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTS 83 (246)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEEETTEEEEEECS
T ss_pred cEECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEecCCCEEEEEECC
Confidence 4555677889999999999999998889999998 32222221 3444443 34567899999
Q ss_pred CCCCCCEEEEEEEEeCCc----eeEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEEEEeeCCC--ee
Q psy14060 196 VFMEDSGVFAVIAENRGG----KAKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKISATKPL--DV 268 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g----~~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~~~g~p~~--~v 268 (283)
+..+|+|.|+|.+.+..+ .......|.|.... ....+|.+.. .+....+..|+.++|.|.+.|.|++ .+
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~----~~~~~P~i~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v 159 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLEDL----KNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 159 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEESCG----GGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEecCC----CcccCCceEeecCCchhccCCCcEEEEEEEccCcCCceEE
Confidence 999999999999987643 12233456666310 0012455443 3444456779999999999997765 89
Q ss_pred EEeeCCEEecC
Q psy14060 269 YWLKVSSLSDV 279 (283)
Q Consensus 269 ~W~~~g~~l~~ 279 (283)
.|++||+.+..
T Consensus 160 ~W~k~g~~l~~ 170 (246)
T 4dzb_B 160 SWWVNGKEVHS 170 (246)
T ss_dssp EEEETTEEECT
T ss_pred EEEECCEECCC
Confidence 99999999865
No 258
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.69 E-value=9.7e-17 Score=125.23 Aligned_cols=135 Identities=13% Similarity=0.085 Sum_probs=98.3
Q ss_pred CCceeecCCCcEEEEEEEeeecCCEEEEEeCC--EecC------------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FPIT------------SSPDFQIHTFSTKSILIMRQVFMEDSGVFA 205 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~~~------------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 205 (283)
+....+..|+.+.|.|.+.+.|.+.+.|||++ ..+. ...++.+........|.|.++..+|+|.|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~ 85 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGSTSGTTATLTISGAQPEDEAAYY 85 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEEETTEEEEEETTCCGGGCSEEE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEeeCCEEEEEECcCCcccCEEEE
Confidence 56678899999999999988887889999853 2220 134566666667778999999999999999
Q ss_pred EEEEeC-Ccee--EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CC-CeeEEeeCCEEecCC
Q psy14060 206 VIAENR-GGKA--KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KP-LDVYWLKVSSLSDVK 280 (283)
Q Consensus 206 C~a~n~-~g~~--~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~-~~v~W~~~g~~l~~~ 280 (283)
|.+.|. .+.. .....+.|.... ..+|.+...+....+.+|+.+.|.|.+.|. |. +.|.|++||+.+...
T Consensus 86 C~~~n~~~~~~~~~~~~~l~V~~~~------~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~~~~~ 159 (212)
T 1nfd_E 86 CLSSYGDNNDLVFGSGTQLTVLRGP------KSSPKVTVFPPSPEELRTNKATLVCLVNDFYPGSATVTWKANGATINDG 159 (212)
T ss_dssp EEEEETTTTEEEECCCEEEEEECCC------CBCCEEECCCCCHHHHHTTEECCCEEEEEEBSSCCEEEEEETTEEECSS
T ss_pred EEEEcccCcccccCCceEEEEccCC------CCCCEEEeeCCchHhccCCceEEEEEEEeeECCccEEEEEECCeEcCCC
Confidence 999973 2221 122456664311 135666654444455689999999999987 54 689999999988643
No 259
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.68 E-value=1.2e-16 Score=126.13 Aligned_cols=135 Identities=12% Similarity=0.153 Sum_probs=101.9
Q ss_pred cCCceeecCCCcEEEEEEEeeecC-CEEEEEeCCEecC---------CCCCe--EEE----------EeCCEEEEEEcCC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDPL-PTIKWFREDFPIT---------SSPDF--QIH----------TFSTKSILIMRQV 196 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p~-~~~~W~k~~~~~~---------~~~~~--~~~----------~~~~~~~l~i~~~ 196 (283)
.+....+..|+.+.|.|.+.+.+. +.+.|++++.... ....+ ++. .... ..|.|.++
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~~-~~L~i~~v 84 (231)
T 2pet_A 6 VPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLDSQ-GRLVLAEA 84 (231)
T ss_dssp CCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEECTT-CCEEESSC
T ss_pred CCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccCCC-ceEEEccc
Confidence 345678899999999999999875 8999998654311 00001 111 1111 23999999
Q ss_pred CCCCCEEEEEEEEeCC-ceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeE-EEEEEE-EeeCCCeeEEeeC
Q psy14060 197 FMEDSGVFAVIAENRG-GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLA-RFDAKI-SATKPLDVYWLKV 273 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~-g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v-~L~C~~-~g~p~~~v~W~~~ 273 (283)
..+|+|.|+|.+.+.. +.....+.|.|.... ..|.+...+....+.+|+.+ .|.|.+ .+.|.|.+.|+++
T Consensus 85 ~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~p-------~~~~~~~~~~~~~~~~g~~~~~l~C~~~~~~p~p~i~W~~~ 157 (231)
T 2pet_A 85 QVGDERDYVCVVRAGAAGTAEATARLNVFAKP-------EATEVSPNKGTLSVMEDSAQEIATCNSRNGNPAPKITWYRN 157 (231)
T ss_dssp CGGGCEEEEEEEECGGGCEEEEEEEEEEEBCC-------CCCEEEECCSSCCTTCCSEEEEEEEEEEEEBSCCEEEEEET
T ss_pred CcccCceEEEEEEecCCCceEEEEEEEEEecC-------CCcEEecCCcceeecCCCceEEEEEEeECcccCCEEEEEEC
Confidence 9999999999999987 777777888887532 34666666666778899988 999999 8999999999999
Q ss_pred CEEecCCC
Q psy14060 274 SSLSDVKR 281 (283)
Q Consensus 274 g~~l~~~~ 281 (283)
|..+....
T Consensus 158 ~~~~~~~~ 165 (231)
T 2pet_A 158 GQRLEVPV 165 (231)
T ss_dssp TEECCCCS
T ss_pred CccCcccc
Confidence 99987653
No 260
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=1.3e-15 Score=106.92 Aligned_cols=95 Identities=18% Similarity=0.252 Sum_probs=85.6
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.|...+....+..|+.+.|.|.+.|.|.+.+.|+|++..+....++.+........|.|.++..+|+|.|+|.|.|.
T Consensus 6 ~pp~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 85 (114)
T 2cqv_A 6 SGPQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENK 85 (114)
T ss_dssp CCCEESCCCCSEEEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECS
T ss_pred CCCEEEeCCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEEC
Confidence 57888888888899999999999999999999999999999988777888777666788999999999999999999999
Q ss_pred CceeEEEEEEEEEec
Q psy14060 212 GGKAKCSANLVVEEK 226 (283)
Q Consensus 212 ~g~~~~~~~l~v~~~ 226 (283)
.|.....+.|.|...
T Consensus 86 ~g~~~~~~~l~V~~~ 100 (114)
T 2cqv_A 86 LGSRQAQVNLTVVDK 100 (114)
T ss_dssp SCEEECCEEEEEECS
T ss_pred CCcEEEEEEEEEECC
Confidence 999888889998864
No 261
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.68 E-value=4.8e-16 Score=121.96 Aligned_cols=133 Identities=13% Similarity=0.150 Sum_probs=95.6
Q ss_pred cCCceeecCCCcEEEEEEEeeec--CCEEEEEeC--CEecC-----------------CCCCeEEEEe--CCEEEEEEcC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRE--DFPIT-----------------SSPDFQIHTF--STKSILIMRQ 195 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~--~~~~~-----------------~~~~~~~~~~--~~~~~l~i~~ 195 (283)
.+....+..|+++.|.|.+.+.+ .+.+.|+|+ +..+. ...++.+... ....+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (219)
T 1c1e_H 6 QSGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINN 85 (219)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECS
T ss_pred CCCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECC
Confidence 45567889999999999998764 689999986 32211 1234555433 3456899999
Q ss_pred CCCCCCEEEEEEEEeCCce----eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCC-eeE
Q psy14060 196 VFMEDSGVFAVIAENRGGK----AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPL-DVY 269 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g~----~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~-~v~ 269 (283)
+..+|+|.|.|.+.|..+. ......|.|.... ..+|.+........+.+|+.+.|.|.+.| .|.| .|.
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~ 159 (219)
T 1c1e_H 86 LKNEDMATYFCARGTTIVRAMDYWGQGTSLTVSSAK------TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT 159 (219)
T ss_dssp CCGGGCEEEEEEEEETTTTEEEEECCCEEEEECCCC------CBCCEEEEECCCSSSCCSSEEEEEEEEEEEBSSCCEEE
T ss_pred CCcccCEEEEEEEeccCcccceeecCceEEEEecCC------CCCCeEEEecCccccccCCeEEEEEEcccccCCCeEEE
Confidence 9999999999999998632 1123566665411 12466654443445678999999999998 8988 999
Q ss_pred EeeCCEEe
Q psy14060 270 WLKVSSLS 277 (283)
Q Consensus 270 W~~~g~~l 277 (283)
|+++|..+
T Consensus 160 W~~~g~~~ 167 (219)
T 1c1e_H 160 WNSGSLSS 167 (219)
T ss_dssp EGGGTBCT
T ss_pred EEeCCccc
Confidence 99999764
No 262
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.68 E-value=2.8e-16 Score=121.79 Aligned_cols=137 Identities=8% Similarity=0.015 Sum_probs=97.6
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCe-EEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDF-QIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
..+|.+...+. ..+.+|++++|.|.+.+ +.+.+.|+|++..+...... ..........|.|.++..+|+|.|+|.+.
T Consensus 6 ~~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~~~~~~~~~~~~l~I~~v~~~D~G~Y~C~a~ 83 (201)
T 1nkr_A 6 HRKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMFNDTLRLIGEHHDGVSKANFSISRMTQDLAGTYRCYGS 83 (201)
T ss_dssp -CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSSCEEEEEECEEETTEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCcCCcceeeeecCCCCceEEEEeccCCcccCeEEEEeEe
Confidence 34677666655 67889999999999975 77899999998755321100 00101124579999999999999999998
Q ss_pred eCCc-----eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 210 NRGG-----KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 210 n~~g-----~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
|... ..+..+.|.|.... .+|.+...+. ..+.+|+.++|.|.+.+ +.+.+.|+|+|..+.
T Consensus 84 ~~~~~~~~~~~s~~~~l~V~~~~-------~~p~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~ 148 (201)
T 1nkr_A 84 VTHSPYQVSAPSDPLDIVIIGLY-------EKPSLSAQPG-PTVLAGENVTLSCSSRS-SYDMYHLSREGEAHE 148 (201)
T ss_dssp BTTBTTCCCCCCCCEEEEEECSS-------CCCEEEEESC-SEECTTCEEEEEEEESS-CCSEEEEEETTCSSC
T ss_pred cCCCCccccCCCCCEEEEeeccC-------CCCceecCCC-CccCCCCeEEEEEeCCC-CCceEEEEECCcccC
Confidence 7532 22344677776521 3566666554 47899999999999886 568899999997654
No 263
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.68 E-value=3.4e-16 Score=122.52 Aligned_cols=134 Identities=10% Similarity=0.016 Sum_probs=94.9
Q ss_pred CCceeecCCCcEEEEEEE-eeec-CCEEEEEeCCE--ec------------CCCCCeEEEEeCCEEEEEEcCCCCCCCEE
Q psy14060 140 IQPCRAFEQDQARFEVEF-DGDP-LPTIKWFREDF--PI------------TSSPDFQIHTFSTKSILIMRQVFMEDSGV 203 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~-~g~p-~~~~~W~k~~~--~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 203 (283)
+....+..|+++.|.|.+ .+.+ .+.+.|+|++. .+ ....++.+........|.|.++..+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 86 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSKSGTSATLGITGLQTGDEAD 86 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEeccCCEEEEEECCCCcccCEE
Confidence 456788999999999995 4433 57899998531 11 01235666656667789999999999999
Q ss_pred EEEEEEeCCc--eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeEEeeCCEEecC
Q psy14060 204 FAVIAENRGG--KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVYWLKVSSLSDV 279 (283)
Q Consensus 204 Y~C~a~n~~g--~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~~~g~~l~~ 279 (283)
|.|.+.|..+ .......|.|.... .+|.+...+.......|+.+.|.|.+.|. |.+ .|.|++||+.+..
T Consensus 87 Y~C~~~~~~~~~~~~~~~~l~V~~~~-------~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~~~~ 159 (216)
T 2xzc_L 87 YYCGTWDSSLNPVFGGGTKLEIKRTV-------AAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSG 159 (216)
T ss_dssp EEEEEECTTSCEEEBCCEEEEECCCC-------BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCCEEEEEETTEECCS
T ss_pred EEEEEEeCCCcceECCCEEEEEcCCC-------CCCceEEeCCChhhccCCcEEEEEEEEeEcCCceEEEEEECCeecCC
Confidence 9999999876 22223456664311 35666654433333468999999999984 554 8999999998764
Q ss_pred C
Q psy14060 280 K 280 (283)
Q Consensus 280 ~ 280 (283)
.
T Consensus 160 ~ 160 (216)
T 2xzc_L 160 N 160 (216)
T ss_dssp S
T ss_pred C
Confidence 3
No 264
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.68 E-value=1.8e-15 Score=103.27 Aligned_cols=94 Identities=22% Similarity=0.413 Sum_probs=85.1
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+........|.|.++..+|+|.|+|.+.|
T Consensus 4 ~~~P~i~~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n 83 (99)
T 3puc_A 4 SSKPVIVTGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKDGKAITQGGKYKLSEDKGGFFLEIHKTDTSDSGLYTCTVKN 83 (99)
T ss_dssp CEEEEEEECCCCEEEESSSCEEEEEEEEEESCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEecCccEEEeCCCcEEEEEEEEecCCCEEEEEECCEECcCCCCEEEEEeCCEEEEEECCCCcccCEEEEEEEEe
Confidence 34677888888889999999999999999999999999999999887888888777788899999999999999999999
Q ss_pred CCceeEEEEEEEEE
Q psy14060 211 RGGKAKCSANLVVE 224 (283)
Q Consensus 211 ~~g~~~~~~~l~v~ 224 (283)
..|.....+.|.|.
T Consensus 84 ~~g~~~~~~~l~V~ 97 (99)
T 3puc_A 84 SAGSVSSSCKLTIK 97 (99)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCcEeEEEEEEEE
Confidence 99999888888876
No 265
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.68 E-value=9.1e-16 Score=123.25 Aligned_cols=164 Identities=12% Similarity=0.085 Sum_probs=103.4
Q ss_pred eeeecCcEEEEEEEccCc----cce--E--------Ee--------------ecCCCEEEEEc--CCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIV--R--------KI--------------TATETTEMEHK--GKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~--~--------~~--------------~~~~~~~~~~~--~~~~~L~i~~~~~~D 108 (283)
.+.+|++++|.|.+.+.. .+. + .+ ....|+.+..+ .+..+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (253)
T 3liz_H 11 LVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSSLKSED 90 (253)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECSCCGGG
T ss_pred EECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCCChhh
Confidence 467788999999997732 222 1 11 01245555432 367889999999999
Q ss_pred CeEEEEEEEecc----e---ee-eeecc-CCCCCCeEEecCCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCC
Q psy14060 109 DGYYAITERKYY----A---LS-DLSEQ-KPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSS 177 (283)
Q Consensus 109 ~G~Y~C~a~n~~----~---~~-~~~~~-~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~ 177 (283)
+|.|.|.+.+.. . .. .+... ....+|.+........+..|+.+.|.|.+.+ .|.+ .+.|++++..+...
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~~~~~~~~ 170 (253)
T 3liz_H 91 TAMYYCTRDPAGRAWFAYWGQGTLVTVSAAKTTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSLSSGVH 170 (253)
T ss_dssp CEEEEEEECCBTTTBCCEECCCEEEEECSSCCBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEEEGGGTBCTTEE
T ss_pred CEEEEEEEecCCcceeeEECCCEEEEEeccCCCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEEEEeCCeecceE
Confidence 999999998752 1 11 12211 2234666654444455667999999999998 6766 89999998743110
Q ss_pred CCeEEEEeC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEE
Q psy14060 178 PDFQIHTFS---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223 (283)
Q Consensus 178 ~~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 223 (283)
........+ ..+.|.|.....+| |.|+|.+.|..+.......+.+
T Consensus 171 ~~~~~~~~g~~~~~s~L~i~~~~~~d-g~ytC~v~~~~~~~~~~~~~~~ 218 (253)
T 3liz_H 171 TFPAVLQSDLYTLSSSVTVPSSTWPS-ETVTCNVAHPASSTKVDKKIVP 218 (253)
T ss_dssp ECCCEEETTEEEEEEEEEEETTSTTT-SCCEEEEEEGGGTEEEEEECCC
T ss_pred eCCccccCCeEEEEEEEEEcHHHCCC-ceEEEEEEECCCCcceEEEecC
Confidence 000001111 12468999999999 9999999999887666665544
No 266
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.68 E-value=7.3e-15 Score=116.42 Aligned_cols=165 Identities=10% Similarity=0.038 Sum_probs=101.5
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee------------------------cCCCEEEEE--cCCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT------------------------ATETTEMEH--KGKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~------------------------~~~~~~~~~--~~~~~~L~i~~~~~~D 108 (283)
.+.+|++++|.|.+.+.+ .+. |.. ...|+.+.. .++...|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~-W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (232)
T 1dn0_B 11 LLKPSETLSLTCAVYGGSFSDYYWS-WIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVTAAD 89 (232)
T ss_dssp EECTTSCEEEEEEEESSCCSSCCEE-EEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EEeCCCcEEEEEEEccccCCCceEE-EEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCCccc
Confidence 467788999999998753 222 111 134566554 2457899999999999
Q ss_pred CeEEEEEEE--ec--c---eeeeeeccCC----CCCCeEEecCCceeecCC-CcEEEEEEEeee-cCC-EEEEEe-CCEe
Q psy14060 109 DGYYAITER--KY--Y---ALSDLSEQKP----AKPPVFTKKIQPCRAFEQ-DQARFEVEFDGD-PLP-TIKWFR-EDFP 173 (283)
Q Consensus 109 ~G~Y~C~a~--n~--~---~~~~~~~~~~----~~~p~~~~~~~~~~~~~g-~~v~l~C~~~g~-p~~-~~~W~k-~~~~ 173 (283)
+|.|.|.+. +. . .......+.+ ..+|.+........+..| +.+.|.|.+.+. |.+ .+.|++ ++..
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v~W~~~~g~~ 169 (232)
T 1dn0_B 90 TAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGSASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITFSWKYKNNSD 169 (232)
T ss_dssp CEEEEEEECSSTTSCSCCSEECCCEEEEECSSCCBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEEEEEETTSCE
T ss_pred CEEEEEEEecCCcCCchhhhcccceEEEEccCCCCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEEEEEcCCCCc
Confidence 999999998 32 1 1111112222 234554432222234577 899999999986 776 999999 8877
Q ss_pred cCCCCCe-EEEEeC---CEEEEEEcCCCC--CCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 174 ITSSPDF-QIHTFS---TKSILIMRQVFM--EDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 174 ~~~~~~~-~~~~~~---~~~~l~i~~~~~--~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
+.....+ .....+ ..+.|.|..... +|.|.|+|.+.|..+.......+.+.
T Consensus 170 l~~~~~~~~~~~~~~~~~~s~L~i~~~~~~~~d~g~ytC~v~n~~~~~~~~~~i~~~ 226 (232)
T 1dn0_B 170 ISSTRGFPSVLRGGKYAATSQVLLPSKDVMAGTDEHVVCKVQHPNGNKEKNVPLPVI 226 (232)
T ss_dssp ECCEEECCCEEETTEEEEEEEEEECTTCC---CCCEEEEEEECTTCCEEEEEECCC-
T ss_pred eeeEEECCccccCCcEEEEEEEEEcHHHhcccCCCeEEEEEEeCCCCcceeEecCCC
Confidence 6430000 000111 124688888876 78999999999999877666555443
No 267
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.68 E-value=8.9e-16 Score=117.65 Aligned_cols=135 Identities=12% Similarity=0.005 Sum_probs=97.6
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.+...+.. .+..|++++|.|.+.+ +.+.+.|+|++..+...... .........|.|.++..+|+|.|+|.+.|.
T Consensus 3 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~~~~~-~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 79 (188)
T 1oll_A 3 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRPK-PPERINKVKFYIPDMNSRMAGQYSCIYRVG 79 (188)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECCS-SCTTCCEEEEEESSCCGGGCEEEEEEEEET
T ss_pred CCCEEEeecCC-cCCCCCCEEEEEecCC-CCCEEEEEECCCcccccccc-cCCCcceeEEEeCcCCcccCeEEEEEecCC
Confidence 36777776666 7899999999999876 55789999999875411000 001124567999999999999999999987
Q ss_pred Ccee--EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 212 GGKA--KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 212 ~g~~--~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
.+.. +..+.|.|.... .+|.+...+ ...+.+|+.++|.|.+.+ +.+.+.|+|+|..+.
T Consensus 80 ~~~~~~s~~~~l~V~~~~-------~~p~i~~~p-~~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~ 139 (188)
T 1oll_A 80 ELWSEPSNLLDLVVTEMY-------DTPTLSVHP-GPEVISGEKVTFYCRLDT-ATSMFLLLKEGRSSH 139 (188)
T ss_dssp TEECCCCCCEEEEEESCS-------CCCEEEEES-CSEEETTCEEEEEEECSS-SCSEEEEEEESSSCE
T ss_pred CCCCCCCCceEEEecccC-------CCCeEEECC-CCccccCCEEEEEEEcCC-CCCEEEEEECCcccc
Confidence 6543 334666666421 256666544 456899999999999876 557899999997653
No 268
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.67 E-value=2.8e-15 Score=102.37 Aligned_cols=94 Identities=27% Similarity=0.362 Sum_probs=82.0
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEE-EeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIH-TFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+....++.+. .......|.|.++..+|+|.|+|.|.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N 83 (99)
T 1g1c_A 4 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCELVIRDVTGEDSASIMVKAIN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEEEEEEETTEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCceEecCcceEEcCCCcEEEEEEEEEeCCCEEEEEECCEECCCCCCEEEEEcCCCEEEEEECCCCcCCCEEEEEEEEE
Confidence 3677888888889999999999999999999999999999998876665443 355677899999999999999999999
Q ss_pred CCceeEEEEEEEEEe
Q psy14060 211 RGGKAKCSANLVVEE 225 (283)
Q Consensus 211 ~~g~~~~~~~l~v~~ 225 (283)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1g1c_A 84 IAGETSSHAFLLVQA 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEEec
Confidence 999999888888763
No 269
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.67 E-value=4.6e-15 Score=116.52 Aligned_cols=149 Identities=11% Similarity=0.097 Sum_probs=100.3
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee---------------------------cCCCEEEEEc--CCEEEEEEccCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT---------------------------ATETTEMEHK--GKIQERVVDASE 105 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~---------------------------~~~~~~~~~~--~~~~~L~i~~~~ 105 (283)
.+.+|++|+|.|.+.+.+ .+. |.. ...|+.+..+ ....+|.|.+++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~-W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 89 (221)
T 3m8o_H 11 LVQPGGSLKLSCAASGFTLSGSNVH-WVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQMNSLK 89 (221)
T ss_dssp EECTTCCEEEEEEEESSCGGGSEEE-EEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEECSCC
T ss_pred EEcCCCCEEEEEEcccccccccEEE-EEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEECCCC
Confidence 366788999999998743 221 111 1245555432 457789999999
Q ss_pred CCCCeEEEEEEEecc-----eeeeeecc--CCCCCCeEE-ecCCceeecCCCcEEEEEEEee-ecC-C-EEEEEeCCEec
Q psy14060 106 LDDDGYYAITERKYY-----ALSDLSEQ--KPAKPPVFT-KKIQPCRAFEQDQARFEVEFDG-DPL-P-TIKWFREDFPI 174 (283)
Q Consensus 106 ~~D~G~Y~C~a~n~~-----~~~~~~~~--~~~~~p~~~-~~~~~~~~~~g~~v~l~C~~~g-~p~-~-~~~W~k~~~~~ 174 (283)
.+|+|.|.|.+.+.. +......+ ....+|.+. ..+... ..|+.++|.|.+.+ .|. + .+.|++++..+
T Consensus 90 ~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~v~W~~~g~~~ 167 (221)
T 3m8o_H 90 SDDTAMYYCVIRGDVYNRQWGQGTLVTVSSASPTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLSVTWSESGQGV 167 (221)
T ss_dssp GGGCEEEEEEEESCTTCCCBBCCEEEEECSCCCBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEEEEESCCSTTC
T ss_pred HHHCEEEEEEEECCChhheECCCEEEEEecCCCCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEEEEEEECCEEC
Confidence 999999999998763 11111112 223355554 233322 78999999999998 665 4 89999998765
Q ss_pred C----------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCcee
Q psy14060 175 T----------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 175 ~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
. ....+.+ .+.|.|......|.|.|+|.+.|..+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~-----~s~L~i~~~~~~d~g~ytC~v~~~~~~~ 213 (221)
T 3m8o_H 168 TARNFPPSQDASGDLYTT-----SSQLTLPATQCLAGKSVTCHVKHYTNPS 213 (221)
T ss_dssp EEEECCCEECSSSSCEEE-----EEEEEEEGGGSCTTCEEEEEEEETTSCC
T ss_pred ceEEcCceeeCCCCcEEE-----EEEEEECHHHcCCCCeEEEEEEECCCCc
Confidence 2 1222222 2358899999999999999999987553
No 270
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.67 E-value=2.9e-15 Score=115.83 Aligned_cols=150 Identities=7% Similarity=-0.080 Sum_probs=102.7
Q ss_pred eeeecCcEEEEEEEccCccc--e-EEeecC---CCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDKEI--V-RKITAT---ETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPA 131 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i--~-~~~~~~---~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~ 131 (283)
.+..|++++|.|.+ |.|.. . .|.... .+... ......|.|.+++.+|+|.|.|.+.|..+. .....+.+.
T Consensus 18 ~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l~~~~~--~~~~~~L~I~~v~~~d~G~Y~C~a~n~~~~~~~~~~ltV~ 94 (210)
T 1gsm_A 18 AVALGASRQLTCRL-ACADRGASVQWRGLDTSLGAVQS--DTGRSVLTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLVY 94 (210)
T ss_dssp EEETTCCEEEEEEE-CCSSTTCEEEEESSTTTTCCEEE--ESSEEEEEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEE
T ss_pred EEeCCCCEEEEEEC-CCCCCCcceEEeecccccCcEEe--cCCccEEEECccCcccCceEEEEEEeCCCceEEEEEEEEE
Confidence 46778899999999 87632 2 554332 23332 346788999999999999999999998774 345566677
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeee-cC----CEEEEEeCCEecCCCCCe--EEEE--------eCC----EEEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL----PTIKWFREDFPITSSPDF--QIHT--------FST----KSILI 192 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~----~~~~W~k~~~~~~~~~~~--~~~~--------~~~----~~~l~ 192 (283)
.+|....... ..+..|+.+ |.|.+.+. |. +++.|||++..+...... .+.. ... .+++.
T Consensus 95 ~~P~~~~i~~-~~~~~g~~~-l~C~a~g~~P~~~~~lti~Wlk~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~vts~~~ 172 (210)
T 1gsm_A 95 AFPNQLTVSP-AALVPGDPE-VACTAHKVTPVDPNALSFSLLVGGQELEGAQALGPEVQEEEEEPQGDEDVLFRVTERWR 172 (210)
T ss_dssp BCCSEEEEES-SSBCTTCCE-EEEEEEEEBCCCTTTEEEEEEETTEECTTCEECCCEEEECTTCCSSCCCCCEEEEEEEE
T ss_pred ecCCCcEEcc-ceEEeCCce-EEEEeCCCCCCCCCCcEEEEEECCEEcccccccccceecccccccCCcceEEEEEEEEe
Confidence 7776554322 266678888 99999985 64 489999999998543210 1100 011 23455
Q ss_pred EcCCCCCCCEEEEEEEEeCCc
Q psy14060 193 MRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~g 213 (283)
+......|.+.|+|.|.+...
T Consensus 173 ~~~~~~D~~~~~tC~a~~~L~ 193 (210)
T 1gsm_A 173 LPPLGTPVPPALYCQATMRLP 193 (210)
T ss_dssp CCCCCSSCCSEEEEEEEEEET
T ss_pred ecCCcccCCceEEEEEEeeCC
Confidence 556666777899999988653
No 271
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.67 E-value=9.5e-16 Score=119.05 Aligned_cols=129 Identities=14% Similarity=0.211 Sum_probs=95.6
Q ss_pred cCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC-------------------CCCeEEEEeCCEEEEEEcCCCCC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS-------------------SPDFQIHTFSTKSILIMRQVFME 199 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~-------------------~~~~~~~~~~~~~~l~i~~~~~~ 199 (283)
.+.+..+.+|+.+.|.|...+.+.+.+.|++++..... ..++.+. ...+|.|.++..+
T Consensus 5 ~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~---~~~~L~i~~v~~~ 81 (208)
T 3r4d_A 5 EAVPPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY---SNGSLLFQMITMK 81 (208)
T ss_dssp EEESSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEEC---TTSCEEECSCCGG
T ss_pred cCccceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEe---cCCeEEEcccccc
Confidence 34456788999999999988878899999997542211 1122221 1235999999999
Q ss_pred CCEEEEEEEEeCC-ceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 200 DSGVFAVIAENRG-GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 200 d~G~Y~C~a~n~~-g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
|+|.|+|.+.+.. +.......|.|.... ..|.+...... +..|+.+.|.|.+.+.| |.+.|+++|..+.
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~-------~~p~i~~~~~~--~~~g~~v~l~C~~~~~p-p~i~W~~~g~~l~ 151 (208)
T 3r4d_A 82 DMGVYTLDMTDENYRRTQATVRFHVHQPV-------TQPFLQVTNTT--VKELDSVTLTCLSNDIG-ANIQWLFNSQSLQ 151 (208)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEEECCC-------CCCEEEESCSS--CCTTCCEEEEEECSCTT-CEEEEEETTEECC
T ss_pred CCeEEEEEEEcccCceeEEEEEEEeccCC-------CCCEEecCCce--EeeCCCEEEEEECCCCC-CceEEEECCEeCC
Confidence 9999999999985 556666778777531 23555554443 89999999999999865 8999999999987
Q ss_pred CC
Q psy14060 279 VK 280 (283)
Q Consensus 279 ~~ 280 (283)
..
T Consensus 152 ~~ 153 (208)
T 3r4d_A 152 LT 153 (208)
T ss_dssp CC
T ss_pred CC
Confidence 54
No 272
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.66 E-value=2.2e-15 Score=104.38 Aligned_cols=96 Identities=23% Similarity=0.415 Sum_probs=86.3
Q ss_pred CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 130 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 130 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
...+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+....++.+...+....|.|.++..+|+|.|+|.+.
T Consensus 10 ~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~ 89 (107)
T 3irg_B 10 QGSPPCFLRFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRAR 89 (107)
T ss_dssp CCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCCCeeEcCCccEEEeCCCeEEEEEEEeecCCCEEEEEECCeECCCCCcEEEEeCCCEEEEEEccCCHHhCEEEEEEEE
Confidence 34578888888889999999999999999999999999999999987777777777777889999999999999999999
Q ss_pred eCCceeEEEEEEEEEe
Q psy14060 210 NRGGKAKCSANLVVEE 225 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~ 225 (283)
|..|.....+.|.|..
T Consensus 90 n~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 90 NAAGEAYAAAAVTVLE 105 (107)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred cCCCcEEEEEEEEEEc
Confidence 9999988888888874
No 273
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.66 E-value=2.9e-16 Score=119.16 Aligned_cols=120 Identities=13% Similarity=0.145 Sum_probs=88.0
Q ss_pred eeecCCCcEEEEEEEee--ecCCEEEEEeCCEecC----------CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 143 CRAFEQDQARFEVEFDG--DPLPTIKWFREDFPIT----------SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 143 ~~~~~g~~v~l~C~~~g--~p~~~~~W~k~~~~~~----------~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
+.+.+|+.+.|.|...+ .+.+.+.|+|++..+. ...++.+... .+|.|.++..+|+|.|.|.+.|
T Consensus 6 v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~~~i~~~~~~~~~~~~~~r~~~~~~---gsL~I~~v~~~D~G~Y~C~~~n 82 (176)
T 1hng_A 6 VWGALGHGINLNIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEILAN---GDLKIKNLTRDDSGTYNVTVYS 82 (176)
T ss_dssp EEEETTSCEEECCTTCCCCTTEEEEEEEETTEEEEEEETTSCCEESSTTEEECTT---SCEEESSCCGGGCEEEEEEEEE
T ss_pred EEEEcCCcEEEcCCCCCcccccccEEEEeCCceeEEEcCCCeecCCCCeEEECCC---CcEEEcccccccCEEEEEEEEe
Confidence 46788999999994322 3567899999986542 2334444222 2499999999999999999999
Q ss_pred CCcee--EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecCC
Q psy14060 211 RGGKA--KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 211 ~~g~~--~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~~ 280 (283)
..|.. ...+.|.|.... ..|.+. ..+..+.|.|.+.|.|.|.|.|++||+.+...
T Consensus 83 ~~g~~~~~~~~~l~V~~~~-------~~p~i~--------~~~~~v~L~C~~~g~p~p~i~W~~~g~~l~~~ 139 (176)
T 1hng_A 83 TNGTRILNKALDLRILEMV-------SKPMIY--------WECSNATLTCEVLEGTDVELKLYQGKEHLRSL 139 (176)
T ss_dssp TTCCEEEEEEEEEEEECCC-------CCCEEE--------EETTTTEEEEECSSCSSCEEEEEETTEEEEEE
T ss_pred CCCCEEEEEEEEEEEeCCC-------CCCEEE--------ecCCcEEEEEEecCCCCcEEEEEECCEECCCC
Confidence 99886 555677776421 224333 22445899999999999999999999988643
No 274
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.66 E-value=4.3e-16 Score=117.17 Aligned_cols=124 Identities=12% Similarity=0.101 Sum_probs=94.9
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeec-CCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDP-LPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p-~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
+|.+...+....+..|+.+.|.|.+.+.| .+.+.|++++..+..... .+.+.++..+|+|.|+|.+.|.
T Consensus 4 ~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g~~~~~~~~----------~~~~~~~~~~d~G~Y~C~~~~~ 73 (170)
T 3ry4_A 4 KAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNGNLIPTHTQ----------PSYRFKANNNDSGEYTCQTGQT 73 (170)
T ss_dssp BCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETTEECTTCCS----------SEEEEECCGGGCEEEEEEETTS
T ss_pred CCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECCeEcccCcc----------ceEEEecccccCeEEEEEEeCC
Confidence 45566667767889999999999999876 578999999998875422 2566789999999999999875
Q ss_pred CceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEE-eeCCCeeEEeeCCEEecC
Q psy14060 212 GGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKIS-ATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 212 ~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~-g~p~~~v~W~~~g~~l~~ 279 (283)
... ..+.|.|.. ++.+.. .....+.+|+.+.|.|.+. +.|.+.+.|+++|..+..
T Consensus 74 ~~s--~~~~l~v~~----------~~~~~~-~~~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~g~~~~~ 129 (170)
T 3ry4_A 74 SLS--DPVHLTVLF----------EWLVLQ-TPHLEFQEGETIMLRCHSWKDKPLVKVTFFQNGKSQKF 129 (170)
T ss_dssp BCC--CCEEEEEEC----------CSEEEE-CSCSEECTTCCEEEEEEEGGGCCEEEEEEEETTEEEEE
T ss_pred Cce--EeEEEEEEC----------CceEec-CCCceeecCCeEEEEEECCCCCCCceEEEEECCeEccc
Confidence 433 345666663 344433 3456788999999999994 556689999999998753
No 275
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.66 E-value=3.3e-16 Score=121.96 Aligned_cols=125 Identities=18% Similarity=0.221 Sum_probs=94.0
Q ss_pred CCceeecCCCcEEEEEEEeeec----CCEEEEEe----------------CCEecCC-----CCCeEEEE---eCCEEEE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP----LPTIKWFR----------------EDFPITS-----SPDFQIHT---FSTKSIL 191 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p----~~~~~W~k----------------~~~~~~~-----~~~~~~~~---~~~~~~l 191 (283)
+..+.+..|+.+.|.|.+.+.+ .+.+.|++ ++..+.. ..++.+.. .....+|
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 3456789999999999998876 46999998 3333321 22333321 1134569
Q ss_pred EEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEE-EeeCCCeeEE
Q psy14060 192 IMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKI-SATKPLDVYW 270 (283)
Q Consensus 192 ~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~-~g~p~~~v~W 270 (283)
.|.++..+|+|.|+|.+.|..+.....+.|.|.. +|.+...+....+..|+.+.|.|.+ .+.|.|.+.|
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~----------~p~~~~~~~~~~~~~g~~v~l~C~~~~g~p~~~v~W 156 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLV----------KPSGTRCFVDGSEEIGNDFKLKCEPKEGSLPLQFEW 156 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC----------CCBSCEEEEESCCBTTCCEEEEEECSBCCSSCEEEE
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEc----------CCCCceeeeecceecCCcEEEEecCCCCCCCCEEEE
Confidence 9999999999999999999999888888888875 4444333333447899999999999 8999999999
Q ss_pred eeCC
Q psy14060 271 LKVS 274 (283)
Q Consensus 271 ~~~g 274 (283)
++++
T Consensus 157 ~~~~ 160 (214)
T 3jz7_A 157 QKLS 160 (214)
T ss_dssp EECS
T ss_pred EECC
Confidence 9943
No 276
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.66 E-value=2.3e-16 Score=126.10 Aligned_cols=133 Identities=11% Similarity=0.140 Sum_probs=96.6
Q ss_pred cCCceeecCCCcEEEEEEEee---ecCCEEEEEeCCEecC------------------------------CCCCeEEEEe
Q psy14060 139 KIQPCRAFEQDQARFEVEFDG---DPLPTIKWFREDFPIT------------------------------SSPDFQIHTF 185 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g---~p~~~~~W~k~~~~~~------------------------------~~~~~~~~~~ 185 (283)
.+....+.+|+.+.|.|.+.+ .|.+.+.|+|++.... ...++.+..
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~- 86 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN- 86 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-
Confidence 445678999999999999987 7889999999875421 011111111
Q ss_pred CCEEEEEEcCCCCCCCEEEEEEEEeCCcee-----EEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEE
Q psy14060 186 STKSILIMRQVFMEDSGVFAVIAENRGGKA-----KCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAK 259 (283)
Q Consensus 186 ~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~ 259 (283)
.....|.|.++..+|+|.|+|.+.|..+.. ...+.|.|.... .+|.+.. .+....+.+|+.+.|.|.
T Consensus 87 ~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~-------~~~~~~~~~~~~~~v~~g~~v~L~C~ 159 (250)
T 2fbo_J 87 LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGHT-------PSNNVHVSTAEVVQVDEGNDITMTCP 159 (250)
T ss_dssp TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTTS-------CCSCCEECCCSEEECCTTCCEEECCC
T ss_pred CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEeccC-------CCCeEEEecCceEEecCCCcEEEEEE
Confidence 112469999999999999999999987643 446677766421 1333333 344567788999999999
Q ss_pred EEeeCCCeeEEeeCCEEecC
Q psy14060 260 ISATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 260 ~~g~p~~~v~W~~~g~~l~~ 279 (283)
+.+.|.|.+.|+++|..+..
T Consensus 160 ~~g~p~p~v~W~k~~~~~~~ 179 (250)
T 2fbo_J 160 CTDCANANVTWYTGPTFFEN 179 (250)
T ss_dssp EESCTTCEEEEEEEEECSSC
T ss_pred ecCCCCCeeEEEeCCCcccc
Confidence 99999999999999987754
No 277
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.65 E-value=7.8e-17 Score=127.63 Aligned_cols=140 Identities=12% Similarity=0.124 Sum_probs=79.7
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCE--ec------------CCCCCeEEEEeCCEEEEEEcCCCC
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDF--PI------------TSSPDFQIHTFSTKSILIMRQVFM 198 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~--~~------------~~~~~~~~~~~~~~~~l~i~~~~~ 198 (283)
.+.+...+....+..|+++.|.|.+.+.|.+.+.|+|++. .+ ....++.+...+...+|.|.++..
T Consensus 23 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 102 (233)
T 3bqu_C 23 ETTVTQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSGYGTDFVFTIENMLS 102 (233)
T ss_dssp CCCEEEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCEEEEEEEEC-----C
T ss_pred ceeEEEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeeccCCEEEEEECCCCH
Confidence 3445555677789999999999999998888899998532 11 001233332233345799999999
Q ss_pred CCCEEEEEEEEeCCceeE-EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC--eeEEeeCCE
Q psy14060 199 EDSGVFAVIAENRGGKAK-CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL--DVYWLKVSS 275 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g~~~-~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~--~v~W~~~g~ 275 (283)
+|+|.|.|.+.|..+... ....+.|.... .+|.+...+....+..|+.++|.|.+.|.+++ .++|++||+
T Consensus 103 ~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~~-------~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~ 175 (233)
T 3bqu_C 103 EDVADYYCLQSDNLPYTFGGGTNLEIKRAD-------AAPTVSIFPPSSEQLTSGGASVVCFLNNFYPKDINVKWKIDGS 175 (233)
T ss_dssp CCCSEEEEEECSSSSCCBCCCCBC---CCC-------BCCEEEEECCCHHHHHTTEEEEEEEEEEEBSSCEEEEEEEC--
T ss_pred HHCEEEEEEEecCCceeecCCEEEEEeCCC-------CCCEEEEeCCCHHhhcCCceEEEEEEccccCCceEEEEEECCe
Confidence 999999999988765321 12345554321 25666654444344579999999999986443 799999998
Q ss_pred EecC
Q psy14060 276 LSDV 279 (283)
Q Consensus 276 ~l~~ 279 (283)
.+..
T Consensus 176 ~~~~ 179 (233)
T 3bqu_C 176 ERQN 179 (233)
T ss_dssp ---C
T ss_pred eCCC
Confidence 7754
No 278
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=1.5e-15 Score=121.40 Aligned_cols=138 Identities=14% Similarity=0.168 Sum_probs=96.7
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Eec-----------------CCCCCeEEEEe--CCEEEEEEcCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FPI-----------------TSSPDFQIHTF--STKSILIMRQV 196 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~ 196 (283)
+....+..|++++|.|.+.+.| .+.+.|+|+. ..+ ....++.+... ....+|.|.++
T Consensus 9 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (247)
T 2ghw_B 9 SGGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSL 88 (247)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcC
Confidence 3557899999999999999876 5789999842 110 11245665553 34678999999
Q ss_pred CCCCCEEEEEEEEeCCcee--EEEEEEEEEeccCCC-----CCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeE
Q psy14060 197 FMEDSGVFAVIAENRGGKA--KCSANLVVEEKRQGG-----RGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVY 269 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~g~~--~~~~~l~v~~~~~~~-----~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~ 269 (283)
..+|+|.|.|.+.|..+.. .....|.|....... .....++.+...+....+.+|+.++|.|.+.+.|.+.+.
T Consensus 89 ~~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~ 168 (247)
T 2ghw_B 89 RAEDTAVYYCARDRSYYLDYWGQGTLVTVSSGGGGSGGGGSGGGGSETTLTQSPATLSLSPGERATLSCRASQSVRSNLA 168 (247)
T ss_dssp CGGGCEEEEEEEEETTEEEEECCCEEEEECSCC------------CCCCEEEECSEEEECTTSCEEEEEEESSCCTTCEE
T ss_pred CHHHCEEEEEeeeccCCccccCCceEEEEecccccccccccCCCCcceEEEccCCEEEecCCCcEEEEEEeCCCccceEE
Confidence 9999999999999984332 223466665320000 000124556666677789999999999999999988999
Q ss_pred Eee--CCEEe
Q psy14060 270 WLK--VSSLS 277 (283)
Q Consensus 270 W~~--~g~~l 277 (283)
|++ +|..+
T Consensus 169 W~k~~~g~~~ 178 (247)
T 2ghw_B 169 WYQQKPGQAP 178 (247)
T ss_dssp EEEECTTSCC
T ss_pred EEEECCCCCc
Confidence 999 66543
No 279
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.65 E-value=3.5e-16 Score=122.81 Aligned_cols=140 Identities=9% Similarity=0.028 Sum_probs=93.0
Q ss_pred CCCeEEecCCcee--ecCCCcEEEEEEEeee---cC-CEEEEEeCCEecCCCCCeEEEEe-C----CEEEEEEcCCCCCC
Q psy14060 132 KPPVFTKKIQPCR--AFEQDQARFEVEFDGD---PL-PTIKWFREDFPITSSPDFQIHTF-S----TKSILIMRQVFMED 200 (283)
Q Consensus 132 ~~p~~~~~~~~~~--~~~g~~v~l~C~~~g~---p~-~~~~W~k~~~~~~~~~~~~~~~~-~----~~~~l~i~~~~~~d 200 (283)
.+|.+...+.... +..|+.+.|.|.+.|. |. +.+.|+|++..+........... + ....|.|.++..+|
T Consensus 8 ~~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D 87 (218)
T 2rgs_A 8 GGPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMS 87 (218)
T ss_dssp -CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHT
T ss_pred CCCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCC
Confidence 3555554444444 7899999999999987 33 78999999987653211111000 0 12469999999999
Q ss_pred CEEEEEEEEeCCceeEEEEEEEE-EeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCC-eeEEeeCCEEe
Q psy14060 201 SGVFAVIAENRGGKAKCSANLVV-EEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPL-DVYWLKVSSLS 277 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~~~~~~~l~v-~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~-~v~W~~~g~~l 277 (283)
.|.|+|.+.|..+.......+.. ... ..+|.+...+.......|+.+.|.|.+.| +|.+ .|+|++||..+
T Consensus 88 ~g~Y~C~~~~~~~~~~~~~~v~~~~~~-------~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~ 160 (218)
T 2rgs_A 88 GKEFKCKVNNKDLPSPIERTISKIKGL-------VRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTE 160 (218)
T ss_dssp TCCEEEEEEETTCSSCEEEEECCCCCC-------CBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEE
T ss_pred CCeEEEEEECCcCCCcceEEEeecCCC-------CCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEec
Confidence 99999999998765422222211 010 14676655443322246999999999999 5665 89999999987
Q ss_pred c
Q psy14060 278 D 278 (283)
Q Consensus 278 ~ 278 (283)
.
T Consensus 161 ~ 161 (218)
T 2rgs_A 161 E 161 (218)
T ss_dssp C
T ss_pred c
Confidence 4
No 280
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.65 E-value=2.2e-15 Score=119.75 Aligned_cols=134 Identities=13% Similarity=0.160 Sum_probs=98.7
Q ss_pred EEecCCceeecCCCcEEEEEEEeeec----CCEEEEEeCC--Ee---c---------CCCCCeEEEEeCCEEEEEEcCCC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDP----LPTIKWFRED--FP---I---------TSSPDFQIHTFSTKSILIMRQVF 197 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p----~~~~~W~k~~--~~---~---------~~~~~~~~~~~~~~~~l~i~~~~ 197 (283)
+...+....+.+|+++.|.|.+.+.| .+.+.|+|++ .. + ....++.+...+...+|.|.++.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~ 83 (240)
T 1moe_A 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTGSRTDFTLIIDPVE 83 (240)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCC
T ss_pred eEeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEecCCeEEEEEcCCC
Confidence 45566778899999999999999887 6789999852 11 1 01346666666667789999999
Q ss_pred CCCCEEEEEEEEeCCce-eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCC--CeeEEeeC
Q psy14060 198 MEDSGVFAVIAENRGGK-AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP--LDVYWLKV 273 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~--~~v~W~~~ 273 (283)
.+|+|.|.|.+.|..+. ......|.|..... ...++.+...+....+.+|+.++|.|.+.+.|. +.+.|+++
T Consensus 84 ~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~----~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~ 158 (240)
T 1moe_A 84 ADDVATYYCQQTNEDPYTFGGGTKLEIKGGGS----GGGGEVQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQ 158 (240)
T ss_dssp GGGCEEEEEEECSSSSCCBCCCEEEEECCCSC----CCCCCCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEE
T ss_pred hhhCEEEEEEEccCCceeecCCEEEEEecCCC----CCCceEEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEE
Confidence 99999999999998654 33345666664210 001234555567778999999999999998874 58999995
No 281
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.65 E-value=2.6e-15 Score=116.90 Aligned_cols=131 Identities=12% Similarity=0.095 Sum_probs=93.9
Q ss_pred cCCceeecCCCcEEEEEEEeeecCCE---EEEEeCCEecCCCC------------------CeEEEE---eCCEEEEEEc
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDPLPT---IKWFREDFPITSSP------------------DFQIHT---FSTKSILIMR 194 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p~~~---~~W~k~~~~~~~~~------------------~~~~~~---~~~~~~l~i~ 194 (283)
.+..+.+..|+++.|.|.+.+.|.+. +.|+|++..+.... ++.+.. .....+|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 34567889999999999999877664 89999875432110 111100 1123469999
Q ss_pred CCCCCCCEEEEEEEEeCCceeEEE-EEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeC
Q psy14060 195 QVFMEDSGVFAVIAENRGGKAKCS-ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKV 273 (283)
Q Consensus 195 ~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~ 273 (283)
++..+|+|.|.|.+.+..+..... ..+.+.. .++..........+..|..+.|.|.+.|.|.|.|+|+++
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~ 155 (218)
T 4frw_A 85 NAVQADEGEYECRVSTFPAGSFQARLRLRVLV---------PPLPSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTE 155 (218)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB---------CCCCEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEES
T ss_pred eccHHHCCceeEEEEeccCceeeeEEEEEEee---------eccceeeeeeeeeeeeccccceeeeccCCcCceEEEEEC
Confidence 999999999999998876554433 4444443 234444555667788999999999999999999999999
Q ss_pred CEEec
Q psy14060 274 SSLSD 278 (283)
Q Consensus 274 g~~l~ 278 (283)
|..+.
T Consensus 156 ~~~~~ 160 (218)
T 4frw_A 156 VKGTT 160 (218)
T ss_dssp SCCEE
T ss_pred Ccccc
Confidence 87654
No 282
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.65 E-value=2.4e-15 Score=120.04 Aligned_cols=157 Identities=12% Similarity=0.063 Sum_probs=99.9
Q ss_pred eeeecCcEEEEEEEccCccce-EEee----------------------cCCCEEEEE-cCCEEEEEEccCCCCCCeEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT----------------------ATETTEMEH-KGKIQERVVDASELDDDGYYAI 114 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~----------------------~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C 114 (283)
.+.+|+.++|.|.+.+.+... .|.. ...++.+.. .....+|.|.+++.+|+|.|.|
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 91 (245)
T 3nfj_J 12 VQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLLSDSGFYLC 91 (245)
T ss_dssp EEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCGGGCEEEEE
T ss_pred EecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCChhhCEEEEE
Confidence 366788999999999866322 2222 123444443 3457899999999999999999
Q ss_pred EEEecc-----e--eeeeeccC------CCCCCeEEe-cCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCC
Q psy14060 115 TERKYY-----A--LSDLSEQK------PAKPPVFTK-KIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSP 178 (283)
Q Consensus 115 ~a~n~~-----~--~~~~~~~~------~~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~ 178 (283)
.+.+.. . ......+. ...+|.+.. .+....+..|+.+.|.|.+.|. |.+ .+.|++++..+....
T Consensus 92 ~~~~~~g~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~W~k~g~~l~~~~ 171 (245)
T 3nfj_J 92 AWSVSVGAGVPTIYFGEGSWLTVVEDLNKVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELSWWVNGKEVHSGV 171 (245)
T ss_dssp EEECCTTTSSCCCEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred EEeeccCCCceeEEECCCeEEEEEcccCCCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEEEEECCEECCCCc
Confidence 999821 1 11111111 223555443 3333345568999999999985 444 789999999876421
Q ss_pred CeEE--E------EeCC---EEEEEEcCCCCCC-CEEEEEEEEeCCcee
Q psy14060 179 DFQI--H------TFST---KSILIMRQVFMED-SGVFAVIAENRGGKA 215 (283)
Q Consensus 179 ~~~~--~------~~~~---~~~l~i~~~~~~d-~G~Y~C~a~n~~g~~ 215 (283)
.... . ..+. ...|.|.....+| .|.|+|.+.|.....
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~g~~YtC~v~~~~~~~ 220 (245)
T 3nfj_J 172 CTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLSE 220 (245)
T ss_dssp EECSSCEESSSSSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBCS
T ss_pred ccccccccccccCCCCCEEEEEEEEECHHHhccCCCeEEEEEEECCCCC
Confidence 1000 0 0011 1357888777777 679999999876443
No 283
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.64 E-value=1.6e-15 Score=120.65 Aligned_cols=156 Identities=12% Similarity=0.072 Sum_probs=100.4
Q ss_pred eeeecCcEEEEEEEccCccceEEee-----------------------cCCCEEEEE-cCCEEEEEEccCCCCCCeEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIVRKIT-----------------------ATETTEMEH-KGKIQERVVDASELDDDGYYAI 114 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~~~~~-----------------------~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~C 114 (283)
.+.+|+.++|.|.+.+......|.. ...++.+.. .....+|.|.+++.+|+|.|.|
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y~C 92 (240)
T 3q5y_A 13 IKEKGGRSVLTCIPISGHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALELEDSAMYFC 92 (240)
T ss_dssp EEETTCCEEEEEECCTTCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCCGGGCEEEEE
T ss_pred eecCCCcEEEEEEeCCCCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCChhHCEEEEE
Confidence 3677899999999876332112221 124555554 3357789999999999999999
Q ss_pred EEEec--c----eeeeeeccC----CCCCCeEEe-cCCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCCCCeE
Q psy14060 115 TERKY--Y----ALSDLSEQK----PAKPPVFTK-KIQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSSPDFQ 181 (283)
Q Consensus 115 ~a~n~--~----~~~~~~~~~----~~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~~~~~ 181 (283)
.+.+. . +......+. ...+|.+.. .+....+..|+.+.|.|.+.+ .|.+ .+.|+++|..+.......
T Consensus 93 ~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~~ 172 (240)
T 3q5y_A 93 ASSLRWGDEQYFGPGTRLTVLEDLRNVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGVSTD 172 (240)
T ss_dssp EEESSTTBCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTEEEC
T ss_pred EEccCCCcceEEcCCEEEEEeccccCCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEEECCEECcCcEecC
Confidence 99732 1 111111111 224555443 344445667899999999998 5656 799999999886532110
Q ss_pred ---EEEeCCE----EEEEEcCCCCCC-CEEEEEEEEeCCce
Q psy14060 182 ---IHTFSTK----SILIMRQVFMED-SGVFAVIAENRGGK 214 (283)
Q Consensus 182 ---~~~~~~~----~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 214 (283)
....+.. +.|.|.....+| .|.|+|.+.|....
T Consensus 173 ~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~YtC~v~~~~~~ 213 (240)
T 3q5y_A 173 PQAYKESNYSYSLSSRLRVSATFWHNPRNHFRCQVQFHGLS 213 (240)
T ss_dssp SSCEEEETTEEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred CceeeCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 1122222 248888888888 77999999987543
No 284
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.64 E-value=2.9e-15 Score=117.49 Aligned_cols=128 Identities=14% Similarity=0.124 Sum_probs=91.6
Q ss_pred CCceeecCCCcEEEEEEEeeecC-----CEEEEEeCCEecC---------C------CCCeEEEE---eCCEEEEEEcCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDPL-----PTIKWFREDFPIT---------S------SPDFQIHT---FSTKSILIMRQV 196 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p~-----~~~~W~k~~~~~~---------~------~~~~~~~~---~~~~~~l~i~~~ 196 (283)
.....+..|+.+.|.|.+.+.|. +.+.|+|++..+. . ..+..+.. .....+|.|.++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 8 KDLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMEDKNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp CSEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETTEEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred CccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECCcEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 34567889999999999987663 4899999753321 0 12222221 123457999999
Q ss_pred CCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeC-CE
Q psy14060 197 FMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKV-SS 275 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~-g~ 275 (283)
..+|+|.|+|.+.| .+.....+.|.|.... ..|... ....+..|+.+.|.|.+.|.|.|.+.|+++ |+
T Consensus 88 ~~~D~G~Y~C~~~~-~~~~~~~~~l~V~~~~-------~~~~~~---~~~~~~~g~~v~L~C~~~g~P~p~i~W~~~~g~ 156 (222)
T 3sbw_C 88 KLQDAGVYRCMISY-GGADYKRITVKVNAPY-------NKINQR---ILVVDPVTSEHELTCQAEGYPKAEVIWTSSDHQ 156 (222)
T ss_dssp CGGGCEEEEEEEES-SSEEEEEEEEEEEBCC-------CCCEEE---EEEEETTTTEEEEEEEEEEBSCCEEEEEETTCC
T ss_pred ccccCeEEEEEEEe-CCCceeEEEEEEECCC-------CCCCce---eeeeecCCCcEEEEEEecCCCCCeEEEEECCCc
Confidence 99999999999999 5666667788887521 112211 123678999999999999999999999998 76
Q ss_pred Eec
Q psy14060 276 LSD 278 (283)
Q Consensus 276 ~l~ 278 (283)
.+.
T Consensus 157 ~~~ 159 (222)
T 3sbw_C 157 VLS 159 (222)
T ss_dssp EEC
T ss_pred eec
Confidence 654
No 285
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.64 E-value=3.6e-16 Score=125.97 Aligned_cols=153 Identities=9% Similarity=0.038 Sum_probs=95.5
Q ss_pred eeeecCcEEEEEEEccCccce-EEee---cCC----------------------CEEE--EEcCCEEEEEEccCCCCCCe
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT---ATE----------------------TTEM--EHKGKIQERVVDASELDDDG 110 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~---~~~----------------------~~~~--~~~~~~~~L~i~~~~~~D~G 110 (283)
.+.+|++|+|.|.+.+.+... .|.. ... +... .......+|.|.+++.+|+|
T Consensus 13 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG 92 (259)
T 3omz_A 13 IRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRNLIENDSG 92 (259)
T ss_dssp EEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESSCCGGGCE
T ss_pred EecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECCCCcccCE
Confidence 467788999999998876322 2322 110 1111 11123457999999999999
Q ss_pred EEEEEEEecce----eeeeeccCCCC-----------------CCeEEecCCceeecCCCcEEEEEEEeee-cCCEEEEE
Q psy14060 111 YYAITERKYYA----LSDLSEQKPAK-----------------PPVFTKKIQPCRAFEQDQARFEVEFDGD-PLPTIKWF 168 (283)
Q Consensus 111 ~Y~C~a~n~~~----~~~~~~~~~~~-----------------~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~~~~W~ 168 (283)
.|.|.+.|..+ ......+.+.. +|.+...+....+.+|++++|.|.+.+. +.+.+.||
T Consensus 93 ~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~ 172 (259)
T 3omz_A 93 VYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWY 172 (259)
T ss_dssp EEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEECCCSSCEEEEE
T ss_pred EEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCCccCCceEEEe
Confidence 99999988643 11111122211 3456666777889999999999988774 78899999
Q ss_pred eCCE--ecC------------CCCCeEEEE--eCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 169 REDF--PIT------------SSPDFQIHT--FSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 169 k~~~--~~~------------~~~~~~~~~--~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
|+.. .+. ...++.+.. ......|.|.++..+|+|.|+|.+.+.
T Consensus 173 k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~~ 231 (259)
T 3omz_A 173 KRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQLEDSAKYFCALGES 231 (259)
T ss_dssp EECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCGGGCSEEEEEEESC
T ss_pred eeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCChhHCEEEEEEEeCc
Confidence 8531 100 012333321 123456999999999999999999753
No 286
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.64 E-value=6.7e-15 Score=115.20 Aligned_cols=157 Identities=9% Similarity=0.083 Sum_probs=97.4
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee------------------------cCCCEEEEE--cCCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT------------------------ATETTEMEH--KGKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~------------------------~~~~~~~~~--~~~~~~L~i~~~~~~D 108 (283)
.+.+|++++|.|.+.+.+ .+. |.. ...++.+.. .++..+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~-W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 89 (215)
T 1c5d_H 11 LVQPSQTLSLTCTVSGFPLTTNGVS-WVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQTED 89 (215)
T ss_dssp EECTTCCEEEEEEECSSCTTSCCEE-EEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCCGGG
T ss_pred eecCCCcEEEEEEECCCcCCCCeEE-EEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCCccc
Confidence 467788999999998753 232 221 123555543 2356799999999999
Q ss_pred CeEEEEEEEecce------eeeeeccC--CCCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCC
Q psy14060 109 DGYYAITERKYYA------LSDLSEQK--PAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSP 178 (283)
Q Consensus 109 ~G~Y~C~a~n~~~------~~~~~~~~--~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~ 178 (283)
+|.|.|.+.+..+ ......+. ...+|.+........+..|+.+.|.|.+.|. |.+ .+.|++++..+....
T Consensus 90 ~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~g~~~~~~~ 169 (215)
T 1c5d_H 90 TAIYFCTREDGWNYFDYWGPGTMVTVSSAQTTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNSGALSSDVHT 169 (215)
T ss_dssp CEEEEEEECCSSSCSCCBCCCEEEEECSSCCBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGGGTTCCSCCB
T ss_pred CEEEEEEEecCCcccceEcCCEEEEecCCCCCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEccCCccCceEe
Confidence 9999999988631 11111122 1234555443333345789999999999986 777 999999886543211
Q ss_pred CeEEEEeCCEEEE--EEcCCCCCCCEEEEEEEEeCCceeEEE
Q psy14060 179 DFQIHTFSTKSIL--IMRQVFMEDSGVFAVIAENRGGKAKCS 218 (283)
Q Consensus 179 ~~~~~~~~~~~~l--~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 218 (283)
..... .+....+ .+......| |.|+|.+.|..+.....
T Consensus 170 ~~~~~-~~g~~~~~s~L~~~~~~~-g~ytC~v~n~~~~~~~~ 209 (215)
T 1c5d_H 170 FPAVL-QSGLYTLTSSVTSSTWPS-QTVTCNVAHPASSTKVD 209 (215)
T ss_dssp CCCEE-ETTEEEEEEEEEESSTTT-SCCEEEEEEGGGTEEEE
T ss_pred cCccc-CCCCEEEEEEEecccCCC-CeEEEEEEeCCCCccEE
Confidence 11111 1122111 122333355 99999999988775543
No 287
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.64 E-value=2.4e-15 Score=101.55 Aligned_cols=89 Identities=19% Similarity=0.305 Sum_probs=76.0
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--EecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
+|.|...+....+..|+.+.|.|.+.|.|.|.+.|++++ ..+... ..+........|.|.++..+|+|.|+|.|.|
T Consensus 2 ~P~i~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~~~~--~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 79 (93)
T 1wit_A 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPE--LLVDAKSSTTSIFFPSAKRADSGNYKLKVKN 79 (93)
T ss_dssp CCEECCCCCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBCSTT--SEEEEETTEEEEECTTBCGGGCEEEEEEEEE
T ss_pred CCeEEcCCCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCcccCCc--EEEEecCCEEEEEECCCChhcCEEEEEEEEc
Confidence 677766777888999999999999999999999999999 777554 3344456677899999999999999999999
Q ss_pred CCceeEEEEEEEE
Q psy14060 211 RGGKAKCSANLVV 223 (283)
Q Consensus 211 ~~g~~~~~~~l~v 223 (283)
..|.....+.|.|
T Consensus 80 ~~G~~~~~~~l~V 92 (93)
T 1wit_A 80 ELGEDEAIFEVIV 92 (93)
T ss_dssp TTEEEEEEEEEEE
T ss_pred CCCeEEEEEEEEE
Confidence 9998888877766
No 288
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.64 E-value=9.9e-16 Score=116.69 Aligned_cols=116 Identities=11% Similarity=0.105 Sum_probs=80.2
Q ss_pred CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee---eeeccCC---CCCCeEEecCCceeecCCCcEEEEEEEe
Q psy14060 85 TETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALS---DLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEFD 158 (283)
Q Consensus 85 ~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~---~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~~ 158 (283)
..++.+.. ..+|.|.+++.+|+|.|+|.+.|..+.. ....+.+ ..+|.+.. .+..+.|.|.+.
T Consensus 57 ~~R~~~~~---ngsL~I~~v~~~DsG~Y~c~~~n~~g~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~ 125 (182)
T 1hnf_A 57 KDTYKLFK---NGTLKIKHLKTDDQDIYKVSIYDTKGKNVLEKIFDLKIQERVSKPKISW--------TCINTTLTCEVM 125 (182)
T ss_dssp CTTEEECT---TSCEEECSCCGGGCEEEEEEEEETTSCEEEEEEEEEEEECCCCCCEEEE--------ETTTTEEEEECS
T ss_pred CCeEEECC---CCCEEECCCChhhCEEEEEEEEeCCCceeEEEEEEEEEcCcCCCCEEEE--------ccCcEEEEeEcc
Confidence 34555442 2379999999999999999999986632 1222222 22344432 233689999999
Q ss_pred eecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEE
Q psy14060 159 GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLV 222 (283)
Q Consensus 159 g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 222 (283)
+.|.+.+.|++++..+ .. ... .+.+.. ..+|.|.|+|.|.|..+...+...+.
T Consensus 126 ~~p~~~~~W~~~g~~l-~~-------~~~--~i~~~~-~~~d~G~Y~C~a~N~~~~~~s~~~~~ 178 (182)
T 1hnf_A 126 NGTDPELNLYQDGKHL-KL-------SQR--VITHKW-TTSLSAKFKCTAGNKVSKESSVEPVS 178 (182)
T ss_dssp SCSSCEEEEEESSCEE-EE-------ESS--CEEEEC-CSCEEEEEEEEEECSSCEEEEEEEEE
T ss_pred CCCCCEEEEEECCEEC-CC-------CCc--EEEEec-ccCCCcEEEEEEEeCCCCcEEcceec
Confidence 8899999999999877 21 111 133332 47899999999999999888776653
No 289
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.64 E-value=3.3e-15 Score=114.97 Aligned_cols=128 Identities=9% Similarity=0.160 Sum_probs=91.0
Q ss_pred CCceeecCCCcEEEEEEEee-ecCCEEEEEeCCEecC---CC---------------CCeEEEEeCCEEEEEEcCCCCCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDG-DPLPTIKWFREDFPIT---SS---------------PDFQIHTFSTKSILIMRQVFMED 200 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g-~p~~~~~W~k~~~~~~---~~---------------~~~~~~~~~~~~~l~i~~~~~~d 200 (283)
+..+.+..|+++.|.|.+.+ .+.+.+.|++++..+. .. .++.+. ...+|.|.++..+|
T Consensus 5 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~---~~~sL~I~~v~~~D 81 (193)
T 2if7_A 5 PLMVNGILGESVTLPLEFPAGEKVNFITWLFNETSLAFIVPHETKSPEIHVTNPKQGKRLNFT---QSYSLQLSNLKMED 81 (193)
T ss_dssp CEEEEEETTSCEEECCCCCCCSCCCEEEEEETTEEEEEEECCSSSCCEEEECCHHHHTTEEEC---TTCCEEECSCCGGG
T ss_pred CeEEEEEecCeEEEeccCCCcccccEEEEEECCEEEEEEecccCCCCceeecCccccccEEEC---CCeEEEECCCCccc
Confidence 45577889999999999875 3457999999876442 10 122222 23569999999999
Q ss_pred CEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCC-eEEEEEEEEee-CCCeeEEeeCCEEec
Q psy14060 201 SGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQ-LARFDAKISAT-KPLDVYWLKVSSLSD 278 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~-~v~L~C~~~g~-p~~~v~W~~~g~~l~ 278 (283)
+|.|.|.+.+..+.....+.|.|.... ..|.+.... ..+..|. .++|.|.+.|. |.|.|.|+++|+.+.
T Consensus 82 ~G~Y~C~~~~~~~~~~~~~~L~V~~~~-------~~p~i~~~~--~~~~~g~~~v~L~C~~~g~~p~p~i~W~~~g~~l~ 152 (193)
T 2if7_A 82 TGSYRAQISTKTSAKLSSYTLRILRQL-------RNIQVTNHS--QLFQNMTCELHLTCSVEDADDNVSFRWEALGNTLS 152 (193)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEECCC-------EEEEEEECC--C---CSSEEEEEEEEEESCCTTCEEEEEETTEEEE
T ss_pred CceEEEEEEecCCCeEEEEEEEEEccC-------CCCeEecCc--eeecCCCceEEEEEEEecCCCceEEEEEeCCEEcC
Confidence 999999999998877667788887521 123333322 2234565 89999999985 478999999998764
Q ss_pred C
Q psy14060 279 V 279 (283)
Q Consensus 279 ~ 279 (283)
.
T Consensus 153 ~ 153 (193)
T 2if7_A 153 S 153 (193)
T ss_dssp S
T ss_pred C
Confidence 3
No 290
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.64 E-value=3.7e-15 Score=100.53 Aligned_cols=89 Identities=29% Similarity=0.389 Sum_probs=77.9
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.|...+.+..+.+|+.+.|.|.+.+ +.+.+.|+|+|..+....++.+...+..+.|.|.++..+|+|.|+|.|.|.
T Consensus 4 ~~~~~~~~~~~~~v~~G~~v~l~C~v~~-~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~ 82 (93)
T 1waa_A 4 ALIEVEKPLYGVEVFVGETAHFEIELSE-PDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANT 82 (93)
T ss_dssp CCCCEEECCCCEEEETTSCEEEEEEESS-SSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTE
T ss_pred CCcEeeccCcceEEeCCCCEEEEEEECC-CCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCC
Confidence 4778888899999999999999999986 568899999999998888888888888889999999999999999999763
Q ss_pred CceeEEEEEEEEEe
Q psy14060 212 GGKAKCSANLVVEE 225 (283)
Q Consensus 212 ~g~~~~~~~l~v~~ 225 (283)
..++.|.|.+
T Consensus 83 ----~~sa~L~V~~ 92 (93)
T 1waa_A 83 ----KSAANLKVKE 92 (93)
T ss_dssp ----EEEEEEEEEC
T ss_pred ----cEEEEEEEEc
Confidence 4567777763
No 291
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.64 E-value=2.1e-15 Score=114.82 Aligned_cols=110 Identities=15% Similarity=0.179 Sum_probs=87.4
Q ss_pred eeecCCCcEEEEEEEeeecCC--EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEE
Q psy14060 143 CRAFEQDQARFEVEFDGDPLP--TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSAN 220 (283)
Q Consensus 143 ~~~~~g~~v~l~C~~~g~p~~--~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 220 (283)
..+.+|+.+.|.|.+.+.|.| .+.|+|++..+...... .....|.|. ..+|+|.|+|.+.|.. .....
T Consensus 8 ~~v~~G~~v~l~C~~~~~~~p~~~~~W~k~~~~l~~~~~~-----~~~~~l~i~--~~~d~G~Y~C~~~n~~---~~~~~ 77 (184)
T 3b5h_A 8 TVEDLGSKILLTCSLNDSATEVTGHRWLKGGVVLKEDALP-----GQKTEFKVD--SDDQWGEYSCVFLPEP---MGTAN 77 (184)
T ss_dssp EEEEETTEEEEEEEEESCSSCCCEEEEESSSEEEECTTCC-----CSEEEEEEC--GGGCCEEEEEEEESTT---SCEEE
T ss_pred EEEecCCCEEEEEECCCCCCCceEEEEEeCCEEeeccccc-----CCcEEEEEe--chhhCeEEEEEEECCc---CcEEE
Confidence 467889999999999987776 99999999887654321 123346666 6899999999999832 24456
Q ss_pred EEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeC-CCeeEEee
Q psy14060 221 LVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATK-PLDVYWLK 272 (283)
Q Consensus 221 l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p-~~~v~W~~ 272 (283)
|.|. .+|.+...+....+.+|+.+.|.|.+.|.| .|.+.|++
T Consensus 78 l~V~----------~~P~~~~~~~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~ 120 (184)
T 3b5h_A 78 IQLH----------GPPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYK 120 (184)
T ss_dssp EEEC----------CSCCCEESCSEEEECTTSCEEEEEECCCSSCCCEEEEEE
T ss_pred EEEe----------cCCceeecCCCcEEcCCCcEEEEEEECCCCCCCeEEEEE
Confidence 6665 467787777777899999999999999999 78999999
No 292
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.64 E-value=7e-16 Score=120.10 Aligned_cols=135 Identities=11% Similarity=0.061 Sum_probs=90.8
Q ss_pred EEecCCcee-ecCCCcEEEEEEEeeec---C-CEEEEEeCCEecCCCCC-eEEEEeC----CEEEEEEcCCCCCCCEEEE
Q psy14060 136 FTKKIQPCR-AFEQDQARFEVEFDGDP---L-PTIKWFREDFPITSSPD-FQIHTFS----TKSILIMRQVFMEDSGVFA 205 (283)
Q Consensus 136 ~~~~~~~~~-~~~g~~v~l~C~~~g~p---~-~~~~W~k~~~~~~~~~~-~~~~~~~----~~~~l~i~~~~~~d~G~Y~ 205 (283)
++..+.... +..|+++.|.|.+.|.+ . ..+.|+|++..+..... ......+ ....|.|.++..+|.|.|+
T Consensus 5 ~~~~P~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~ 84 (207)
T 2vol_A 5 FIFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFK 84 (207)
T ss_dssp EEECCCHHHHHSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEE
T ss_pred EEeCcChhhhhccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEE
Confidence 344445444 78999999999999874 2 48999999977643110 0000011 1246999999999999999
Q ss_pred EEEEeCCceeEEEEEEEE--EeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeEEeeCCEEec
Q psy14060 206 VIAENRGGKAKCSANLVV--EEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVYWLKVSSLSD 278 (283)
Q Consensus 206 C~a~n~~g~~~~~~~l~v--~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~~~g~~l~ 278 (283)
|.+.|..+.......+.+ ... .+|.+...+.......|+.+.|.|.+.|. |.+ .+.|++||+.+.
T Consensus 85 C~a~~~~~~~~~~~~v~~~~~~~--------~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~ 153 (207)
T 2vol_A 85 CRVNSAAFPAPIEKTISKTKGRP--------KAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAE 153 (207)
T ss_dssp EEEECTTCSSCEEEEECCCCCCC--------BCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECS
T ss_pred EEEEccCCCCceEEEeccCCCCC--------cCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEecc
Confidence 999998875422222221 111 46776554433333469999999999985 443 899999999875
No 293
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.64 E-value=3.6e-16 Score=122.25 Aligned_cols=126 Identities=10% Similarity=0.001 Sum_probs=89.0
Q ss_pred CCceeecCC--CcEEEEEEEeeecCCEEEEEeC---CEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 140 IQPCRAFEQ--DQARFEVEFDGDPLPTIKWFRE---DFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 140 ~~~~~~~~g--~~v~l~C~~~g~p~~~~~W~k~---~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
+..+.+.+| +.+.|.|.+.+ |.+.+.|+++ +..+.....+... ....|.|.++..+|+|.|+|.|.|..+.
T Consensus 14 p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~~~~~~~~~---~~~~l~I~~v~~~D~G~Y~C~a~n~~~~ 89 (213)
T 2x1w_L 14 HGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVPDGNRISWD---SKKGFTIPSYMISYAGMVFCEAKINDES 89 (213)
T ss_dssp CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECCCSSSCEEE---TTTEEEEEGGGTTTCSEEEEEEC----C
T ss_pred ceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCccccCCCccccc---CCccEEEccCChhcCceEEEEEEECCee
Confidence 456788899 99999999987 8899999884 6665554333322 1235999999999999999999985444
Q ss_pred eEEE-EEEEEEeccCCCCCCCCCCeEEecCC-ceEEcCCCeEEEEEEEEeeCC--CeeEEeeCCEEe
Q psy14060 215 AKCS-ANLVVEEKRQGGRGGVVPPSFLTTIS-SAVINVGQLARFDAKISATKP--LDVYWLKVSSLS 277 (283)
Q Consensus 215 ~~~~-~~l~v~~~~~~~~~~~~~p~~~~~~~-~~~v~~g~~v~L~C~~~g~p~--~~v~W~~~g~~l 277 (283)
..+. ..|.|... .+|.+...+. ...+.+|+.++|.|.+.|.|. +.+.|+++|+.+
T Consensus 90 ~~s~~~~l~v~~~--------~~p~~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~ 148 (213)
T 2x1w_L 90 YQSIMYIVVVVGY--------RIYDVVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKH 148 (213)
T ss_dssp EECCCEEEEECBC--------CEEEEEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSC
T ss_pred EEEEEEEEEEeCC--------cccceEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCcc
Confidence 3332 55555431 2444544444 448999999999999998654 479999998753
No 294
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.64 E-value=4.1e-15 Score=120.01 Aligned_cols=155 Identities=9% Similarity=0.072 Sum_probs=99.0
Q ss_pred eeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEEc--CCEEEEEEccCCCCC
Q psy14060 60 IHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEHK--GKIQERVVDASELDD 108 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~~--~~~~~L~i~~~~~~D 108 (283)
+.+|++++|.|.+.+.+ .+. |.. ...|+.+..+ .....|.|.+++.+|
T Consensus 18 v~~G~~v~L~C~~~~~~~~~~~v~-W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 96 (261)
T 2xqy_G 18 VKPGASVKMSCKASGYSFTSYWMN-WVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLSSLTSED 96 (261)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEE-EEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EcCCCCEEEEEEeCCcccCCceEE-EEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEcCCCccc
Confidence 66788999999998764 222 211 1235555432 356899999999999
Q ss_pred CeEEEEEEEecce----eeeeeccCC----CCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCC
Q psy14060 109 DGYYAITERKYYA----LSDLSEQKP----AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSP 178 (283)
Q Consensus 109 ~G~Y~C~a~n~~~----~~~~~~~~~----~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~ 178 (283)
+|.|.|.+.+..+ ......+.+ ..+|.+........+..|+.++|.|.+.+. |.+ .+.|++++..+....
T Consensus 97 sG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~W~k~g~~~~~~~ 176 (261)
T 2xqy_G 97 SAVYYCGRLGYVYGFDYWGQGTTLTVSSAKTTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLTWNSGSLSSGVHT 176 (261)
T ss_dssp CEEEEEEEECTTSSEEEECCCEEEEECSSCCBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEEEGGGTCCTTEEE
T ss_pred CeEEEEEEecCCCcceEECCCEEEEEccCCCCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEEEecCCCcCceEe
Confidence 9999999988531 111112222 234555443333346779999999999885 766 999999987643110
Q ss_pred CeEEEEeC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 179 DFQIHTFS---TKSILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 179 ~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
...+...+ ..+.|.|.....+| |.|+|.+.|......
T Consensus 177 ~~~~~~~g~~~~~s~L~i~~~~~~~-g~YtC~v~n~~~~~~ 216 (261)
T 2xqy_G 177 FPAVLQSDLYTLSSSVTVTSSTWPS-QSITCNVAHPASSTK 216 (261)
T ss_dssp CCCEEETTEEEEEEEEEEETTTTTT-SCCEEEEEEGGGTEE
T ss_pred cCceecCCcEEEEEEEEEeccccCC-CEEEEEEEECCCCcc
Confidence 00011111 13468998888878 999999999765533
No 295
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.64 E-value=5.3e-15 Score=100.93 Aligned_cols=94 Identities=22% Similarity=0.407 Sum_probs=80.0
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCC-eEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPD-FQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~-~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
.+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+..... +.....+...+|.|.++..+|+|.|+|.+.|
T Consensus 4 ~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~N 83 (99)
T 1u2h_A 4 APPTFKVSLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNRQPVRPDQRRFAEEAEGGLCRLRILAAERGDAGFYTCKAVN 83 (99)
T ss_dssp EEEEEEECCCCEEEETTCCEEEEEEEEEESCCEEEEEETTEECCCBTTEEEEECGGGEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCEEEEcCCceEecCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCCEEEEEEccCCcCCCEEEEEEEEE
Confidence 467788888888999999999999999999999999999998876543 3444444556899999999999999999999
Q ss_pred CCceeEEEEEEEEEe
Q psy14060 211 RGGKAKCSANLVVEE 225 (283)
Q Consensus 211 ~~g~~~~~~~l~v~~ 225 (283)
..|.....+.|.|.+
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (99)
T 1u2h_A 84 EYGARQCEARLEVRG 98 (99)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCceeEEEEEEEEC
Confidence 999998888888764
No 296
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.63 E-value=6.3e-16 Score=120.37 Aligned_cols=154 Identities=11% Similarity=0.061 Sum_probs=99.2
Q ss_pred eeecCcEEEEEEEccCc---c-ce-EEeecCCCEE-------EEEcC----CEEEEEEccCCCCCCeEEEEEEEecceee
Q psy14060 60 IHTAKSQQVQKEKKGDK---E-IV-RKITATETTE-------MEHKG----KIQERVVDASELDDDGYYAITERKYYALS 123 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~---~-i~-~~~~~~~~~~-------~~~~~----~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~ 123 (283)
+.+|++++|.|.+.|.+ . +. .|...+.... ....+ ....|.|.+++.+|+|.|+|.+.|..+..
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~~~~~~ 94 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTKPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 94 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETTEEECCCEEECCCEETTTEEEEEEEEECCHHHHHTTCCEEEEEECTTCSS
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECCccccccccCCCcCcCCCcEEEEEEEEEehhHcCCCCEEEEEEEccCCCC
Confidence 66789999999999873 2 22 4433221110 00111 13579999999999999999999987632
Q ss_pred ---eeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEecCCCCC--eEEEEeCC---EEEE
Q psy14060 124 ---DLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPITSSPD--FQIHTFST---KSIL 191 (283)
Q Consensus 124 ---~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~~~~~--~~~~~~~~---~~~l 191 (283)
....+ .+..+|.+...+.......|+.+.|.|.+.|. |. +.++|+|+|..+..... ......+. .+.|
T Consensus 95 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~l 174 (207)
T 2vol_A 95 PIEKTISKTKGRPKAPQVYTLPPPKEQMAKDKVSLTCMITDFFPEDITVEWESNGQPAENYKNTQPIMDTDGSYFVYSKL 174 (207)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCTGGGSSSEEEEEEEEEEEBSSCCEEEEEETTEECSCEEECCCEECTTSCEEEEEEE
T ss_pred ceEEEeccCCCCCcCCeEEEeCCCHHHhcCCceEEEEEEeeEECCCCEEEEEECCEeccCcccCCceECCCCCEEEEEEE
Confidence 22222 45567877655444333468999999999985 54 48999999998753211 11111111 1246
Q ss_pred EEcCCCCCCCEEEEEEEEeCCc
Q psy14060 192 IMRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 192 ~i~~~~~~d~G~Y~C~a~n~~g 213 (283)
.|.....+|.|.|+|.+.|...
T Consensus 175 ~i~~~~~~~~g~ytC~a~n~~l 196 (207)
T 2vol_A 175 NVQKSNWEAGNTFTCSVLHEGL 196 (207)
T ss_dssp EEEHHHHSSCCEEEEEEECTTS
T ss_pred EECHHHcCCCCEEEEEEECCCC
Confidence 6666656789999999999864
No 297
>2wqr_A IG epsilon chain C region; immune system, immunoglobulin domain, glycoprotein; HET: NAG BMA MAN PG4; 1.90A {Homo sapiens} PDB: 2y7q_B* 1o0v_A* 3h9y_A* 3h9z_A* 3ha0_A* 1fp5_A 1f6a_B 1g84_A
Probab=99.63 E-value=2.5e-16 Score=131.05 Aligned_cols=192 Identities=11% Similarity=0.065 Sum_probs=115.2
Q ss_pred cceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCC--eeeecCcEEEEEEEccC-c-c--ce-EEeecCCC----
Q psy14060 19 ILKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGK--EIHTAKSQQVQKEKKGD-K-E--IV-RKITATET---- 87 (283)
Q Consensus 19 ~~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~--~v~~g~~v~l~C~~~g~-~-~--i~-~~~~~~~~---- 87 (283)
=.+.|.|+|..|.....+.+.+ ......|.+...... .+.+|+.+.|.|.+.|. | . +. .|......
T Consensus 85 g~Y~C~a~n~~~~~~~~~~~~~---~~~~~~p~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~p~~~~i~W~k~~g~~~~~ 161 (323)
T 2wqr_A 85 RTYTCQVTYQGHTFEDSTKKCA---DSNPRGVSAYLSRPSPFDLFIRKSPTITCLVVDLAPSKGTVQLTWSRASGKPVNH 161 (323)
T ss_dssp CCEEEEEEETTEEEEEEECCCC---CSSGGGCEEEECCCCHHHHHTSSCCEEEEEEEEECCCSSCCEEEEEETTCCCCCC
T ss_pred CcEEEEEEeCCCCcceeeecCC---CCCCCCCEEEEcCCCHHHhccCCeEEEEEEEeccCCCCCceEEEEEECCCccccc
Confidence 3567888888776543322101 011112222221111 25678899999999885 3 2 13 44432211
Q ss_pred ---EEEEE-cC---CEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccC----CCCCCeEEecCCceeecCCCcEEEEE
Q psy14060 88 ---TEMEH-KG---KIQERVVDASELDDDGYYAITERKYYAL-SDLSEQK----PAKPPVFTKKIQPCRAFEQDQARFEV 155 (283)
Q Consensus 88 ---~~~~~-~~---~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~----~~~~p~~~~~~~~~~~~~g~~v~l~C 155 (283)
..... .+ ....|.|.+++.+|+|.|+|.+.|.... .....+. +..+|.+...+.......|+.+.|.|
T Consensus 162 ~~~~~~~~~~g~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~~~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~l~C 241 (323)
T 2wqr_A 162 STRKEEKQRNGTLTVTSTLPVGTRDWIEGETYQCRVTHPHLPRALMRSTTKTSGPRAAPEVYAFATPEWPGSRDKRTLAC 241 (323)
T ss_dssp CCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSCEEEEECCCCSCCBCCEEEEEECCCCTTCTTEEEEEE
T ss_pred ccCCCccCCCCCEEEEEEEEECHHHccCCCCEEEEEECCCCCCCeeeEEEccCCCCCCCEEEEeCCChHHhcCCcEEEEE
Confidence 11001 11 2457999999999999999999998642 1111221 33566655433332223499999999
Q ss_pred EEeee-cCC-EEEEEeCCEecCCCCCeEE----EEeC----CEEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 156 EFDGD-PLP-TIKWFREDFPITSSPDFQI----HTFS----TKSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 156 ~~~g~-p~~-~~~W~k~~~~~~~~~~~~~----~~~~----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
.+.|. |.+ .+.|+|++..+.... +.. ...+ ..+.|.|..+..+|.|.|+|.|.|....
T Consensus 242 ~~~g~~p~~~~v~W~k~g~~l~~~~-~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~g~Y~C~a~n~~~~ 309 (323)
T 2wqr_A 242 LIQNFMPEDISVQWLHNEVQLPDAR-HSTTQPRKTKGSGFFVFSRLEVTRAEWEQKDEFICRAVHEAAS 309 (323)
T ss_dssp EEEEEBSSCCEEEEEETTEECCGGG-EEECCCEECSSSSEEEEEEEEEEHHHHHHCCCEEEEEECTTST
T ss_pred EeeeeeCCCcEEEEEECCEECCCCc-eeecCcccCCCCcEEEEEEEEEChHHccCCCEEEEEEEeCCCC
Confidence 99985 443 899999999876431 111 0111 1346899999999999999999998765
No 298
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.63 E-value=7.4e-15 Score=117.19 Aligned_cols=140 Identities=16% Similarity=0.177 Sum_probs=95.8
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--Ee--------------cCCCCCeEEEE-eCCEEEEEEcCCCC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FP--------------ITSSPDFQIHT-FSTKSILIMRQVFM 198 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~--------------~~~~~~~~~~~-~~~~~~l~i~~~~~ 198 (283)
+...+..+.+..|+.+.|.|.+.+.+.+.+.|||.. .. .....++.+.. .....+|.|.++..
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~ 83 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRPQDRQFILSSKKLLL 83 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEEETTEEEEEESSCCG
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEecCCCEEEEEECCCCh
Confidence 345566788999999999999999899999999831 10 00113444443 34567899999999
Q ss_pred CCCEEEEEEEEeCCc------eeEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEEEEee-CCC-eeE
Q psy14060 199 EDSGVFAVIAENRGG------KAKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKISAT-KPL-DVY 269 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g------~~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~ 269 (283)
+|+|.|+|.+.+..| .......|.|..... ...+|.+.. .+....+..|+.+.|.|.+.|. |.+ .+.
T Consensus 84 ~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~~~~l~C~~~g~~p~~~~v~ 159 (245)
T 3nfj_J 84 SDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVEDLN----KVFPPEVAVFEPSEAEISHTQKATLVCLATGFFPDHVELS 159 (245)
T ss_dssp GGCEEEEEEEECCTTTSSCCCEECCCEEEEEESCGG----GCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEE
T ss_pred hhCEEEEEEEeeccCCCceeEEECCCeEEEEEcccC----CCCCCceEeecCCcccccCCCceEEEEEEccCcCCCEEEE
Confidence 999999999998322 222334666663100 012455543 3333345669999999999995 444 689
Q ss_pred EeeCCEEecC
Q psy14060 270 WLKVSSLSDV 279 (283)
Q Consensus 270 W~~~g~~l~~ 279 (283)
|++||+.+..
T Consensus 160 W~k~g~~l~~ 169 (245)
T 3nfj_J 160 WWVNGKEVHS 169 (245)
T ss_dssp EEETTEEECT
T ss_pred EEECCEECCC
Confidence 9999999864
No 299
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.63 E-value=4.5e-15 Score=120.71 Aligned_cols=141 Identities=14% Similarity=0.186 Sum_probs=98.0
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCE-----ec---------CCCCCeEEEEeCCEEEEEEcCCCC
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDF-----PI---------TSSPDFQIHTFSTKSILIMRQVFM 198 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~-----~~---------~~~~~~~~~~~~~~~~l~i~~~~~ 198 (283)
.+.+...+..+.+.+|++++|.|.+.+.|.+.+.|||++. .+ ....++.+...+...+|.|.++..
T Consensus 12 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 91 (276)
T 3auv_A 12 DIQMTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSGSGTDFTLTISSLQP 91 (276)
T ss_dssp CCCEEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCG
T ss_pred ceeEEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEeccCCeEEEEEccCCh
Confidence 4456666778889999999999999998889999998642 11 113466666666677899999999
Q ss_pred CCCEEEEEEEEeCCce-eEEEEEEEEEeccCC---CCC-CCCCCeEEecCCceEEcCCCeEEEEEEEEeeC--CCeeEEe
Q psy14060 199 EDSGVFAVIAENRGGK-AKCSANLVVEEKRQG---GRG-GVVPPSFLTTISSAVINVGQLARFDAKISATK--PLDVYWL 271 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~---~~~-~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p--~~~v~W~ 271 (283)
+|+|.|.|.+.|..+. ......|.|...... ... ...++.+...+....+.+|++++|.|.+.+.| .+.+.|+
T Consensus 92 ~DsG~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~p~~~~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~ 171 (276)
T 3auv_A 92 EDFATYYCQQHYTTPPTFGCGTKVEIKGGGGGSIEGRSGGGGSEVQLVESGGGLVQPGGSLRLSCAASGFTISDYWIHWV 171 (276)
T ss_dssp GGCEEEEEEECSSSSCCCCCCEEEEC-----------------CCEEEEECCEEECTTCCEEEEEEEESSCGGGSEEEEE
T ss_pred hhCEEEEEEEecCCcccccCCEEEEEecCCCccccccccccCcceEEECCCceEecCCCeEEEEEEecCccCCCCEEEEE
Confidence 9999999999987543 222345555532100 000 00123334445678899999999999999876 4789999
Q ss_pred eC
Q psy14060 272 KV 273 (283)
Q Consensus 272 ~~ 273 (283)
++
T Consensus 172 k~ 173 (276)
T 3auv_A 172 RQ 173 (276)
T ss_dssp EE
T ss_pred Ec
Confidence 96
No 300
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.63 E-value=2.8e-15 Score=119.95 Aligned_cols=139 Identities=17% Similarity=0.172 Sum_probs=95.3
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCE-----e---------cCCCCCeEEEEeCCEEEEEEcCCCCCC
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDF-----P---------ITSSPDFQIHTFSTKSILIMRQVFMED 200 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~-----~---------~~~~~~~~~~~~~~~~~l~i~~~~~~d 200 (283)
.+...+..+.+.+|+.++|.|.+.+.|.+.+.|+|+.. . .....++.........+|.|.++..+|
T Consensus 6 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 6 VLIQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSGSGTDYSLTISNLEQED 85 (250)
T ss_dssp CEECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred eEEecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeCCCCEEEEEEccCChhh
Confidence 34455666788999999999999998999999998531 1 111345666666677789999999999
Q ss_pred CEEEEEEEEeCCceeE-EEEEEEEEeccC---------CCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeC--CCee
Q psy14060 201 SGVFAVIAENRGGKAK-CSANLVVEEKRQ---------GGRGGVVPPSFLTTISSAVINVGQLARFDAKISATK--PLDV 268 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~~~-~~~~l~v~~~~~---------~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p--~~~v 268 (283)
+|.|.|.+.|..+... ....|.|..... .......++.++..+....+.+|+.++|.|.+.+.| .+.+
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v 165 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPELVKPGASVKISCKDSGYAFSSSWM 165 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC------------------------CEECCCEEECTTCCEEEEEECCSTTGGGSEE
T ss_pred CEEEEEEEeeCCCceECCCEEEEEECCCCcccccccccccccCcccceEEecCCceEEcCCceEEEEEEecCCcccCCEE
Confidence 9999999998765422 224555543100 000000123444455667899999999999998876 6789
Q ss_pred EEeeC
Q psy14060 269 YWLKV 273 (283)
Q Consensus 269 ~W~~~ 273 (283)
.|+++
T Consensus 166 ~W~k~ 170 (250)
T 3esu_F 166 NWVKQ 170 (250)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 99997
No 301
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.63 E-value=7e-16 Score=117.43 Aligned_cols=139 Identities=12% Similarity=0.059 Sum_probs=91.1
Q ss_pred eeeecCcEEEEEEEccC---ccceEEeec---------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGD---KEIVRKITA---------------------TETTEMEHKGKIQERVVDASELDDDGYYAI 114 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~---~~i~~~~~~---------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 114 (283)
.+.+|++|+|.|.+.+. +.| .|... ..|+.+. ....+|.|.+++.+|+|.|+|
T Consensus 10 ~v~~G~~vtL~c~~~~~~~~~~i-~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~--~~~~sL~I~~v~~~D~G~Y~C 86 (180)
T 2dru_A 10 NAITGSNVTLTILKHPLASYQRL-TWLHTTNQKILEYFPNGKKTVFESVFKDRVDLD--KTNGALRIYNVSKEDRGDYYM 86 (180)
T ss_dssp EEETTSCEEECCCSSCCCSCSEE-EEESSSSCEEEEECSSSCEEECSSTTTTTEEEC--TTTCCEEECSCCGGGCEEEEE
T ss_pred EEEeCCCEEEeCCCCCCCceeEE-EEEecCCeEEEEEECCCCeeEcchhcCCeEEEe--CCCccEEEcCCCHHHCeEEEE
Confidence 36778899999988542 233 22221 0233331 234579999999999999999
Q ss_pred EEEecceeeeeeccCC---CCCCeEEecCCceeecCCCcEEEEEEE-eeecCCEEEEEeCCEecCCCCCeEEEEeCCEEE
Q psy14060 115 TERKYYALSDLSEQKP---AKPPVFTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 190 (283)
Q Consensus 115 ~a~n~~~~~~~~~~~~---~~~p~~~~~~~~~~~~~g~~v~l~C~~-~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~ 190 (283)
.+.+.........+.+ ...|.+.. .+..+.|.|.+ .+ |.|.+.|++++..+.. . ...+
T Consensus 87 ~v~~~~~~~~~~~L~V~~~~~~P~i~~--------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~~-------~--~~~~ 148 (180)
T 2dru_A 87 RMLHETEDQWKITMEVYEMVSKPMIYW--------ECSNATLTCEVLEG-TDVELKLYQGKEHLRS-------L--RQKT 148 (180)
T ss_dssp EEESSSEEEEEEEEEEECCCCCCEEEE--------EGGGTEEEEECSSC-TTCEEEEEETTEEEEE-------E--SSSE
T ss_pred EEEcCCeEEEEEEEEEECCCCCCEEEe--------cCCCEEEEEEeCCC-CCCEEEEEECCeECcC-------C--CCCE
Confidence 9877652222222222 22343332 23569999999 66 9999999999987641 1 1224
Q ss_pred EEEcCCCCCCCEEEEEEEEeCCceeEEEEE
Q psy14060 191 LIMRQVFMEDSGVFAVIAENRGGKAKCSAN 220 (283)
Q Consensus 191 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 220 (283)
|.+.. .+|+|.|+|.|.|..+.......
T Consensus 149 l~~~~--~~d~g~Y~C~a~N~~~~~~~~~~ 176 (180)
T 2dru_A 149 MSYQW--TNLRAPFKCKAVNRVSQESEMEV 176 (180)
T ss_dssp EEEEC--SCCSSCEEEEEEETTEEEEEEEC
T ss_pred EEEEE--hhcCccEEEEEecCcCcccccee
Confidence 55533 78999999999999988765543
No 302
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.63 E-value=3.6e-15 Score=119.97 Aligned_cols=129 Identities=12% Similarity=0.100 Sum_probs=96.7
Q ss_pred cCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Eec---C--------------CCCCeEEEEe--CCEEEEEEcC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FPI---T--------------SSPDFQIHTF--STKSILIMRQ 195 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~~---~--------------~~~~~~~~~~--~~~~~l~i~~ 195 (283)
.+....+..|++++|.|.+.+.| .+.+.|+|++ ..+ . ...++.+... ....+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (256)
T 1nqb_A 6 QSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLSS 85 (256)
T ss_dssp ECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEECc
Confidence 45567899999999999998865 6799999842 111 0 1245555543 3467899999
Q ss_pred CCCCCCEEEEEEEEeCCce-----eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC----
Q psy14060 196 VFMEDSGVFAVIAENRGGK-----AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL---- 266 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g~-----~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~---- 266 (283)
+..+|+|.|.|.+.|..|. ......|.|.. +|.+...+....+.+|++++|.|.+.+.|.+
T Consensus 86 v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~----------~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~ 155 (256)
T 1nqb_A 86 LTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSS----------DIELTQTPLSLPVSLGDQASISCRSSQSIVHSNGN 155 (256)
T ss_dssp CCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECC----------CCCEEEECSEEEECTTCCEEEEEEESSCCBCTTSC
T ss_pred CChhhCEEEEEEEeeccCccceeEEcCceeeeecc----------cccEEecCcEEEEecCCcEEEEeEecCcccccccc
Confidence 9999999999999998652 12234566653 5667667777889999999999999988765
Q ss_pred -eeEEee--CCEEe
Q psy14060 267 -DVYWLK--VSSLS 277 (283)
Q Consensus 267 -~v~W~~--~g~~l 277 (283)
.+.|+| +|+.+
T Consensus 156 ~~v~W~k~~~g~~~ 169 (256)
T 1nqb_A 156 TYLEWYLQKPGQSP 169 (256)
T ss_dssp BCEEEEEECTTSCE
T ss_pred eEEEEEEECCCCCc
Confidence 899999 66543
No 303
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.63 E-value=1.6e-15 Score=120.50 Aligned_cols=129 Identities=12% Similarity=0.151 Sum_probs=92.7
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--Eec---------------CCCCCeEEEE-eCCEEEEEEcCCC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FPI---------------TSSPDFQIHT-FSTKSILIMRQVF 197 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~~---------------~~~~~~~~~~-~~~~~~l~i~~~~ 197 (283)
+...+..+.+.+|++++|.|. .+.|.+.+.|+|+. ..+ ....++.+.. .....+|.|.++.
T Consensus 3 v~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 3 VTQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQENFSLILELAT 81 (238)
T ss_dssp EEEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEECCSSSBCEEEESSCC
T ss_pred ceECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEccCCceEEEEEecCC
Confidence 445567788999999999999 67788999999951 110 0123444443 2235579999999
Q ss_pred CCCCEEEEEEEEeCCcee-----EEEEEEEEEeccCCCCCCCCCC-----------eEEecCCceEEcCCCeEEEEEEEE
Q psy14060 198 MEDSGVFAVIAENRGGKA-----KCSANLVVEEKRQGGRGGVVPP-----------SFLTTISSAVINVGQLARFDAKIS 261 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~g~~-----~~~~~l~v~~~~~~~~~~~~~p-----------~~~~~~~~~~v~~g~~v~L~C~~~ 261 (283)
.+|+|.|.|.+.|..+.. .....|.|... ++ .+...+....+.+|+.++|.|.+.
T Consensus 82 ~~DsG~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~---------~~~~~p~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~ 152 (238)
T 2p1y_A 82 PSQTSVYFCASGDLGQTNERLFFGHGTKLSVLGS---------ADDAKKDAAKKDGQVRQSPQSLTVWEGETAILNCSYE 152 (238)
T ss_dssp GGGCEEEEEEEEC------CEEECCCEEEEEECC---------CHHHHHHHHHHHTCCEEECSEEEEETTSCEEEEEECC
T ss_pred cccCeeEEEEEEeCCCccccceeCCCeEEEEecc---------CCCCcCCcccceeeEEccCceEEEeCCCeEEEEEEEe
Confidence 999999999999876521 12346666642 22 556666777899999999999999
Q ss_pred eeCCCeeEEeeCC
Q psy14060 262 ATKPLDVYWLKVS 274 (283)
Q Consensus 262 g~p~~~v~W~~~g 274 (283)
+.|.+.+.|++++
T Consensus 153 ~~p~~~i~W~k~~ 165 (238)
T 2p1y_A 153 NSAFDYFPWYQQF 165 (238)
T ss_dssp CTTCCEEEEEEEC
T ss_pred cCCCCcEEEEEEC
Confidence 9999999999963
No 304
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.63 E-value=1.2e-14 Score=107.58 Aligned_cols=101 Identities=35% Similarity=0.593 Sum_probs=87.7
Q ss_pred eeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEe-CCEEEEEEcCCCCCCCEE
Q psy14060 125 LSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF-STKSILIMRQVFMEDSGV 203 (283)
Q Consensus 125 ~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~-~~~~~l~i~~~~~~d~G~ 203 (283)
...+.+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+|++..+....++.+... .....|.|.++..+|+|.
T Consensus 33 ~~~~~v~~~P~~~~~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~ 112 (154)
T 1fhg_A 33 VAEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYDEEGNCSLTISEVCGDDDAK 112 (154)
T ss_dssp -CCCCCCEEEEEEECCCCEEEETTSCEEEEEEEEEESCCEEEEEETTEECCCSSSEEEEECTTCEEEEEESSCCGGGCEE
T ss_pred hhcccCCCCCeEEccCCcEEEeCCCeEEEEEEEEEecCCEEEEEECCEECCCCCcEEEEECCCCeEEEEECCCChhcCEE
Confidence 3455666789999888889999999999999999999999999999999987777766543 335689999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEEEe
Q psy14060 204 FAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 204 Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
|+|.|.|..|.....+.|.|..
T Consensus 113 Y~C~a~N~~G~~~~~~~l~V~~ 134 (154)
T 1fhg_A 113 YTCKAVNSLGEATCTAELLVET 134 (154)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEECCCeEEEEEEEEEeC
Confidence 9999999999998889999885
No 305
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.63 E-value=4.9e-16 Score=117.27 Aligned_cols=139 Identities=9% Similarity=-0.014 Sum_probs=91.4
Q ss_pred eeecCcEEEEEEEccCc-cceEEeec------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecc
Q psy14060 60 IHTAKSQQVQKEKKGDK-EIVRKITA------------------TETTEMEHKGKIQERVVDASELDDDGYYAITERKYY 120 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~-~i~~~~~~------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~ 120 (283)
+.+|++|+|.|.+.+.. .|. |... .+++.+. ....+|.|.+++.+|+|.|.|.+.|..
T Consensus 7 ~~~G~~VtL~c~~~~~~~~i~-W~~~~~~i~~~~~~~~~~~~~~~~R~~~~--~~~~sL~I~~v~~~DsG~Y~C~~~n~~ 83 (171)
T 1ccz_A 7 GVVYGNVTFHVPSNVPLKEVL-WKKQKDKVAELENSEFRAFSSFKNRVYLD--TVSGSLTIYNLTSSDEDEYEMESPNIT 83 (171)
T ss_dssp EETTCCEEECCCCSSCCSCEE-EEETTEEEEEEETTEEEECGGGTTSEEEC--TTTCCEEECSCCGGGCEEEEEECTTCC
T ss_pred EEcCCCEEEcCCCCCCcceEE-EEeCCcEEEEEcCCCcccccccCCcEEEe--CCCCeEEECCCChhhCceEEEEEeCCC
Confidence 56788999999885422 332 2211 1233322 133579999999999999999998876
Q ss_pred eeeeeeccCCC---CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCC
Q psy14060 121 ALSDLSEQKPA---KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVF 197 (283)
Q Consensus 121 ~~~~~~~~~~~---~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~ 197 (283)
+ .....+.+. ..|.+..... ...|.|.+.+.|.|.+.|++++..+..... ..+.+. .
T Consensus 84 ~-~~~~~L~V~~~~~~p~i~~~~~--------~~~L~C~~~~~p~p~i~W~~~~~~l~~~~~---------~~l~~~--~ 143 (171)
T 1ccz_A 84 D-TMKFFLYVLEMVSKPMIYWECS--------NATLTCEVLEGTDVELKLYQGKEHLRSLRQ---------KTMSYQ--W 143 (171)
T ss_dssp S-CEEEEEEEECCCCCCEEEEETT--------TTEEEEECSSCSSCEEEEEETTEEEEEESS---------SEEEEE--C
T ss_pred C-cEEEEEEEECcCCCCEEEEecC--------CcEEEEEeCCCCCcEEEEEECCEECcCCcc---------eEEEEe--c
Confidence 6 222223332 2344432221 127999999889999999999988753222 123333 3
Q ss_pred CCCCEEEEEEEEeCCceeEEEEEE
Q psy14060 198 MEDSGVFAVIAENRGGKAKCSANL 221 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~g~~~~~~~l 221 (283)
..|.|.|+|.|.|..+.....+.|
T Consensus 144 ~~~~g~Y~C~a~N~~~~~~~~~~l 167 (171)
T 1ccz_A 144 TNLRAPFKCKAVNRVSQESEMEVV 167 (171)
T ss_dssp SCCSSCEEEEEEETTEEEEEEECC
T ss_pred cCCCceEEEEEEcccCcccceeEE
Confidence 678999999999999987766554
No 306
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.62 E-value=4.5e-15 Score=101.51 Aligned_cols=94 Identities=26% Similarity=0.393 Sum_probs=79.1
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeE-EEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQ-IHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~-~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
.+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+....... .........|.|.++..+|+|.|+|.+.|
T Consensus 4 ~~P~~~~~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n 83 (100)
T 2kdg_A 4 GPPRFIQVPENMSIDEGRFCRMDFKVSGLPAPDVSWYLNGRTVQSDDLHKMIVSEKGLHSLIFEVVRASDAGAYACVAKN 83 (100)
T ss_dssp EEEECCCCCCCEEEETTCCEEEEEECEEESCCEEEEEETTEEECCCSSSCEEEETTTEEEEEESSCCGGGCEEEEEEEEE
T ss_pred CCCeEEeCCCCEEecCCCEEEEEEEEEeeCCCEEEEEECCEECcCCCcEEEEEcCCCeEEEEECCCCcccCEEEEEEEEc
Confidence 36666667778889999999999999999999999999999887654332 33344556899999999999999999999
Q ss_pred CCceeEEEEEEEEEe
Q psy14060 211 RGGKAKCSANLVVEE 225 (283)
Q Consensus 211 ~~g~~~~~~~l~v~~ 225 (283)
..|.....+.|.|..
T Consensus 84 ~~g~~~~~~~l~V~~ 98 (100)
T 2kdg_A 84 RAGEATFTVQLDVLA 98 (100)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCeEEEEEEEEEEe
Confidence 999988888888875
No 307
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.62 E-value=1.5e-15 Score=103.97 Aligned_cols=90 Identities=12% Similarity=0.173 Sum_probs=80.0
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.|...+.+..+..|+.+.|.|.+ .|.+.+.|+|+|..+....++.+...+..+.|.|.++..+|+|.|+|.|.|.
T Consensus 6 ~p~~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~ 83 (100)
T 2yuz_A 6 SGLKILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY 83 (100)
T ss_dssp CCCCCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS
T ss_pred CCCEEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC
Confidence 36777788888999999999999999 6889999999999998888888888888889999999999999999999997
Q ss_pred CceeEEEEEEEEEe
Q psy14060 212 GGKAKCSANLVVEE 225 (283)
Q Consensus 212 ~g~~~~~~~l~v~~ 225 (283)
....++.|.|..
T Consensus 84 --~~~~~a~L~V~~ 95 (100)
T 2yuz_A 84 --NVTLPAKVHVIS 95 (100)
T ss_dssp --CCCEEEEEEEEC
T ss_pred --CeeEEEEEEEeC
Confidence 556678888875
No 308
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.62 E-value=3.4e-15 Score=117.37 Aligned_cols=132 Identities=15% Similarity=0.150 Sum_probs=93.5
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Ee---c----------------CCCCCeEEEEe--CCEEEEEEc
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FP---I----------------TSSPDFQIHTF--STKSILIMR 194 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~---~----------------~~~~~~~~~~~--~~~~~l~i~ 194 (283)
+....+..|+++.|.|.+.+.+ .+.+.|||+. .. + ....++.+... ....+|.|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 4456788999999999998754 6789999853 11 1 00235555543 345689999
Q ss_pred CCCCCCCEEEEEEEEeCCc-----eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-e
Q psy14060 195 QVFMEDSGVFAVIAENRGG-----KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-D 267 (283)
Q Consensus 195 ~~~~~d~G~Y~C~a~n~~g-----~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~ 267 (283)
++..+|+|.|.|.+.|..+ .......|.|.... ..+|.+........+..|+.++|.|.+.|. |.| .
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~ 160 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSAAK------TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVT 160 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECSSC------CBCCEEEEECCCSCCCCSSEEEEEEEEEEEBSSCCE
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEeccCC------CCCCeEEEccccccccCCCcEEEEEEEccEECCCCE
Confidence 9999999999999998754 22223456665311 135666554433346789999999999986 888 9
Q ss_pred eEEeeCCEEe
Q psy14060 268 VYWLKVSSLS 277 (283)
Q Consensus 268 v~W~~~g~~l 277 (283)
+.|+++|+.+
T Consensus 161 v~W~~~g~~~ 170 (222)
T 1q9r_B 161 VTWNSGSLSS 170 (222)
T ss_dssp EEEGGGTBCT
T ss_pred EEEecCCeEc
Confidence 9999999765
No 309
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.62 E-value=4.1e-15 Score=118.87 Aligned_cols=127 Identities=13% Similarity=0.095 Sum_probs=88.1
Q ss_pred cCCceeecCCCcEEEEEEEeeecCCE-----EEEEeCCEecCCC--------CCe-------EEE---EeCCEEEEEEcC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDPLPT-----IKWFREDFPITSS--------PDF-------QIH---TFSTKSILIMRQ 195 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p~~~-----~~W~k~~~~~~~~--------~~~-------~~~---~~~~~~~l~i~~ 195 (283)
.+....+..|+++.|.|.+.+.|.+. +.|++++...... ... .+. ......+|.|.+
T Consensus 9 ~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~~ 88 (248)
T 3pv7_A 9 AGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPWRLKSGDASLRLPG 88 (248)
T ss_dssp TTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHHHHTTTBCCEEESS
T ss_pred CCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEeccCCCCcEEEEeCC
Confidence 34456788999999999999877765 9999964322110 000 000 001233599999
Q ss_pred CCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCC-eeEEeeC
Q psy14060 196 VFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPL-DVYWLKV 273 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~-~v~W~~~ 273 (283)
+..+|+|.|+|.+.+..+.......|.|.. +|.+...+. ..+..|+.+.|.|.+.| .|.| .+.|++|
T Consensus 89 v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~----------~P~v~~~~~-~~~~~~~~~~L~C~~~g~~P~pi~v~W~k~ 157 (248)
T 3pv7_A 89 IQLEEAGEYRCEVVVTPLKAQGTVQLEVVA----------SPASRLLLD-QVGMKENEDKYMCESSGFYPEAINITWEKQ 157 (248)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEB----------CCEEEEECC---------CEEEEEEEEEBSSCCEEEEEEE
T ss_pred CCHHHCeEEEEEEEeCCccceeEEEEEEec----------CCceEEecC-CccccCCCcEEEEEEccEECCCeEEEEEEC
Confidence 999999999999999988877788888875 566665544 33556778889999998 7888 9999999
Q ss_pred CEE
Q psy14060 274 SSL 276 (283)
Q Consensus 274 g~~ 276 (283)
|+.
T Consensus 158 g~~ 160 (248)
T 3pv7_A 158 TQK 160 (248)
T ss_dssp CSS
T ss_pred Ccc
Confidence 953
No 310
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.62 E-value=1.8e-14 Score=113.53 Aligned_cols=122 Identities=13% Similarity=0.095 Sum_probs=87.1
Q ss_pred CceeecCCCcEEEEEEEeeecCC---EEEEEeCCEec-----------CC------CCCeEEEE---eCCEEEEEEcCCC
Q psy14060 141 QPCRAFEQDQARFEVEFDGDPLP---TIKWFREDFPI-----------TS------SPDFQIHT---FSTKSILIMRQVF 197 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g~p~~---~~~W~k~~~~~-----------~~------~~~~~~~~---~~~~~~l~i~~~~ 197 (283)
.++.+..|+++.|.|.+.+.+.+ .+.|+|++... .. ..+..... .....+|.|.++.
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 45678899999999999875544 79999876321 10 01222211 1235689999999
Q ss_pred CCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCCeeEEeeCC
Q psy14060 198 MEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPLDVYWLKVS 274 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~~v~W~~~g 274 (283)
.+|+|.|+|.+.|..+.......+.+... +........+.+|+.+.|.|.+.| .|.|.|+|++++
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~~~~------------~~~~~~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~ 157 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKVAAL------------GSDLHVDVKGYKDGGIHLECRSTGWYPQPQIQWSNNK 157 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEBC------------CCCCEEEEEEEETTEEEEEEEEEEEBSCCEEEEECTT
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEeeccc------------eecccceeeeccCCceeeEEEeccCCCCCEEEEEECC
Confidence 99999999999999887776655554431 111223456788999999999988 599999999854
No 311
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.62 E-value=5.2e-15 Score=117.98 Aligned_cols=139 Identities=12% Similarity=0.089 Sum_probs=94.3
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--E---ec---------CCCCCeEEEEeCCEEEEEEcCCCCCC
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--F---PI---------TSSPDFQIHTFSTKSILIMRQVFMED 200 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~---~~---------~~~~~~~~~~~~~~~~l~i~~~~~~d 200 (283)
.+...+..+.+.+|++++|.|.+.+.|.+.+.|+|+. . .+ ....++.+.......+|.|.++..+|
T Consensus 3 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D 82 (242)
T 2znx_A 3 VLTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSGSGTDFTLSINSVETED 82 (242)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEecCCCEEEEEECCCChHH
Confidence 3455667788999999999999999888999999853 1 11 01345666555667789999999999
Q ss_pred CEEEEEEEEeCCcee-EEEEEEEEEeccCCC---CCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeC--CCeeEEeeC
Q psy14060 201 SGVFAVIAENRGGKA-KCSANLVVEEKRQGG---RGGVVPPSFLTTISSAVINVGQLARFDAKISATK--PLDVYWLKV 273 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~~~---~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~ 273 (283)
+|.|.|.+.|..+.. .....|.|....... .....++.++..+....+.+|++++|.|.+.+.| .+.+.|+++
T Consensus 83 ~G~Y~C~~~n~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~ 161 (242)
T 2znx_A 83 FGMYFCQQSNSXPYTFGGGTKLEITGGGGSGGGGSGGGGSDIQLQESGPSLVKPSQTLSLTCSVTGDSITSDYXSXIRK 161 (242)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEEECCSEECTTSCEEEEEEEESSCGGGSCEEEEEE
T ss_pred CEEEEEeEecCCceEECCCEEEEEcCCCCCCcccccccccceeeecCCcceecCCCeEEEEEEEEccccCCcceeeEee
Confidence 999999999875432 123456665321000 0000112233333445689999999999999875 468999984
No 312
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.62 E-value=9.4e-15 Score=99.76 Aligned_cols=93 Identities=22% Similarity=0.347 Sum_probs=80.3
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC--CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS--SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
.+|.+...+....+..|+.+.|.|.+.+.|.|.+.|++++..+.. ..++.+.......+|.|.++..+|+|.|+|.+.
T Consensus 4 ~pP~i~~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 83 (100)
T 3irg_A 4 IPPKIEALPSDISIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLG 83 (100)
T ss_dssp EEEEECCCCSEEEEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCeeecCCCcEEEcCCCcEEEEEEEEEcCCCceEEEECCEEeecCCCCEEEEEecCCEEEEEEeecCcccCEEEEEEEE
Confidence 356666667778899999999999999999999999999998863 346777776677889999999999999999999
Q ss_pred eCCceeEEEEEEEEE
Q psy14060 210 NRGGKAKCSANLVVE 224 (283)
Q Consensus 210 n~~g~~~~~~~l~v~ 224 (283)
|..|.....+.|.|.
T Consensus 84 n~~g~~~~~~~l~V~ 98 (100)
T 3irg_A 84 NEFGSDSATVNIHIR 98 (100)
T ss_dssp ETTEEEEEEEEEEEE
T ss_pred eCCCcEEEEEEEEEE
Confidence 999998888888775
No 313
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.62 E-value=1.8e-15 Score=117.83 Aligned_cols=131 Identities=14% Similarity=0.150 Sum_probs=92.5
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--EecC----------------CCCCeEEEEe--CCEEEEEEcCCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FPIT----------------SSPDFQIHTF--STKSILIMRQVF 197 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~~~----------------~~~~~~~~~~--~~~~~l~i~~~~ 197 (283)
+....+..|+++.|.|.+.+.+ .+.+.|+|++ .... ...++.+... ....+|.|.++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 4556889999999999998864 4889999852 1110 1245555542 235689999999
Q ss_pred CCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeEEeeCCE
Q psy14060 198 MEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVYWLKVSS 275 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~~~g~ 275 (283)
.+|+|.|.|.+.|.. .......|.|.... ..+|.+...+....+..|+.+.|.|.+.|. |.| .+.|+++|.
T Consensus 87 ~~D~G~Y~C~~~~~~-~~~~~~~l~V~~~~------~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~~~~ 159 (210)
T 3d9a_H 87 TEDTATYYCANWDGD-YWGQGTLVTVSAAK------TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVTWNSGSL 159 (210)
T ss_dssp GGGCEEEEEEETTSS-CBCCCEEEEECCCC------CBCCEEEEECCTTSCCCSSEEEEEEEEEEEBSSCCEEEEGGGTB
T ss_pred cccCEEEEEEEecCc-ccccceEEEeccCC------CCCCEEEEecCCcccccCCcEEEEEEEeeEecCCcEEEEeeCCc
Confidence 999999999998863 11122455554310 135666544433456789999999999987 888 999999997
Q ss_pred Ee
Q psy14060 276 LS 277 (283)
Q Consensus 276 ~l 277 (283)
.+
T Consensus 160 ~~ 161 (210)
T 3d9a_H 160 SS 161 (210)
T ss_dssp CT
T ss_pred cc
Confidence 54
No 314
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.62 E-value=2.9e-15 Score=120.57 Aligned_cols=156 Identities=9% Similarity=0.064 Sum_probs=86.2
Q ss_pred eeeecCcEEEEEEEccCc----cceEEee-------------------------cCCCEEEEEc--CCEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIVRKIT-------------------------ATETTEMEHK--GKIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~~~~~-------------------------~~~~~~~~~~--~~~~~L~i~~~~~~ 107 (283)
.+.+|++++|.|.+.+.+ .+. |.. ...|+.+..+ .+...|.|.+++.+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~-W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~ 89 (257)
T 3bn9_D 11 LVKPGGSLRLSCAASGFTFSSYAMS-WVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSLRAE 89 (257)
T ss_dssp EECTTCEEEEEEEEESSCGGGCCEE-EEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESCCGG
T ss_pred EEcCCCcEEEEEEeccccCCCceEE-EEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCCChh
Confidence 366788999999998753 222 111 1245555432 45789999999999
Q ss_pred CCeEEEEEEEecce--------------eeeeeccCCC----CCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEE
Q psy14060 108 DDGYYAITERKYYA--------------LSDLSEQKPA----KPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKW 167 (283)
Q Consensus 108 D~G~Y~C~a~n~~~--------------~~~~~~~~~~----~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W 167 (283)
|+|.|.|.+.+..+ ......+.+. .+|.+........+..|+.++|.|.+.+. |.+ .++|
T Consensus 90 DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~~P~pi~v~W 169 (257)
T 3bn9_D 90 DTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW 169 (257)
T ss_dssp GCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSCCBCCEECCCCC-----------CCCEEEEEBSSCCEEEE
T ss_pred hCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCCCcCCcEEEecCcccccCCCcEEEEEEEeeEECCCcEEEE
Confidence 99999999987642 0111122222 34554433323345678999999999986 777 9999
Q ss_pred EeCCEecCCCCCeEEEEeCC----EEEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 168 FREDFPITSSPDFQIHTFST----KSILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 168 ~k~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
++++..+.......+...+. .+.|.|......| |.|+|.+.|......
T Consensus 170 ~k~g~~~~~~~~~~~~~~~g~y~~~s~L~I~~~~~~~-g~YtC~v~n~~~~~~ 221 (257)
T 3bn9_D 170 NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTK 221 (257)
T ss_dssp TTTTCCSSCEECCCEECTTSCEEEEEECCCC--------CEEEEEEEGGGTEE
T ss_pred eeCCCcCCcEecCCeEcCCCCEEEEEEEEEcccccCC-CeEEEEEEecCCCcC
Confidence 99987642110000111111 2357777777777 999999999765443
No 315
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.62 E-value=2.1e-14 Score=97.56 Aligned_cols=89 Identities=16% Similarity=0.259 Sum_probs=79.2
Q ss_pred EecCCceeecCCCcEEEEEEEeee-cCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCcee
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGD-PLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~-p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
...+.+..+..|+.+.|.|.+.+. |.+.+.|++++..+....++.+...+....|.|.++..+|+|.|+|.+.|..|..
T Consensus 5 ~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~n~~g~~ 84 (97)
T 2bk8_A 5 SGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGVRQLENSEKYEITYEDGVAILYVKDITKLDDGTYRCKVVNDYGED 84 (97)
T ss_dssp ECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEECSSCEE
T ss_pred eccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECCEECcCCCCEEEEEcCCeEEEEEecCChhhCeEEEEEEECCCCeE
Confidence 345667889999999999999997 8999999999999988778888777777899999999999999999999999999
Q ss_pred EEEEEEEEEe
Q psy14060 216 KCSANLVVEE 225 (283)
Q Consensus 216 ~~~~~l~v~~ 225 (283)
...+.|.|.+
T Consensus 85 ~~~~~l~V~~ 94 (97)
T 2bk8_A 85 SSYAELFVKG 94 (97)
T ss_dssp EEEEEEEETT
T ss_pred eEEEEEEEEe
Confidence 8888888764
No 316
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.62 E-value=2.5e-15 Score=116.18 Aligned_cols=126 Identities=13% Similarity=0.149 Sum_probs=90.9
Q ss_pred ceeecCCCcEEEEEEEe----eecCCEEEEEeCCEecCC------------CCCeEEEEeCCEEEEEEcCCCCCCCEEEE
Q psy14060 142 PCRAFEQDQARFEVEFD----GDPLPTIKWFREDFPITS------------SPDFQIHTFSTKSILIMRQVFMEDSGVFA 205 (283)
Q Consensus 142 ~~~~~~g~~v~l~C~~~----g~p~~~~~W~k~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~ 205 (283)
.+.+..|+++.|.|.+. +.|.+.+.|++++..+.. ..+..+ ......+|.|.++..+|+|.|.
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~~~i~~~~~~~~~~~~~~~~r~~~-~~~~~~~L~I~~v~~~D~G~Y~ 81 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEKKMVLTMMSGDMNIWPEYKNRTIF-DITNNLSIVILALRPSDEGTYE 81 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETTEEEEEEETTEEEECHHHHTTEEE-ESTTTTEEEECSCCGGGCEEEE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCCcEEEEEeCCceeecCcccceeEE-ccCCCcEEEEecccchhCeEEE
Confidence 46788999999999985 447789999999887521 112222 1123357999999999999999
Q ss_pred EEEEeCCcee-----EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEE-eeCCCeeEEeeCCEEecC
Q psy14060 206 VIAENRGGKA-----KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKIS-ATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 206 C~a~n~~g~~-----~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~-g~p~~~v~W~~~g~~l~~ 279 (283)
|.+.|..|.. ...+.|.|.... ..|.+... ....|+.+.|.|.+. |.|.|.|+|++||+.+..
T Consensus 82 C~~~~~~g~~~~~~~~~~~~l~V~~~~-------~~p~~~~~----~~~~g~~~~l~C~~~~g~P~p~i~W~k~g~~l~~ 150 (201)
T 1dr9_A 82 CVVLKYEKDAFKREHLAEVTLSVKADF-------PTPSISDF----EIPTSNIRRIICSTSGGFPEPHLSWLENGEELNA 150 (201)
T ss_dssp EEEEECCTTSCEEEEEEEEEEEEECCC-------CCCEEEEE----ECSSTTEEEEEEEEEEESSCEEEEEEESSCEECC
T ss_pred EEEEcCCCCccccccccEEEEEEcCCC-------CCCceEec----cCCCCCeEEEEEecCCccCCCEEEEEECCEECcc
Confidence 9999976543 345666666421 12443321 224588999999995 899999999999998864
No 317
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.62 E-value=5.2e-16 Score=121.86 Aligned_cols=155 Identities=10% Similarity=0.060 Sum_probs=97.6
Q ss_pred eeecCcEEEEEEEccC---cc-ce-EEeecCCCE-------EEEEcC----CEEEEEEccCCCCCCeEEEEEEEecceee
Q psy14060 60 IHTAKSQQVQKEKKGD---KE-IV-RKITATETT-------EMEHKG----KIQERVVDASELDDDGYYAITERKYYALS 123 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~---~~-i~-~~~~~~~~~-------~~~~~~----~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~ 123 (283)
+.+|+.++|.|.+.|. |. +. .|...+... .....+ ....|.|.+++.+|+|.|+|.+.|..+..
T Consensus 23 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~ 102 (218)
T 2rgs_A 23 LMISLTPKVTCVVVDVSEDDPDVQISWFVNNVEVHTAQTQTHREDYNSTIRVVSTLPIQHQDWMSGKEFKCKVNNKDLPS 102 (218)
T ss_dssp HCTTSCCEEEEEEEEECTTSCCEEEEEEETTEEECCCEEEEEEETTTTEEEEEEEEECCHHHHHTTCCEEEEEEETTCSS
T ss_pred hccCCCeeEEEEEcCCccCCCceEEEEEECCccccCcccccccccCCCeEEEEEEEEEcHHHcCCCCeEEEEEECCcCCC
Confidence 5678999999999986 32 32 343322111 000011 23579999999999999999999986522
Q ss_pred ---eeec--cCCCCCCeEEecCCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCCCCeEEEEe-CC----EEEE
Q psy14060 124 ---DLSE--QKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSSPDFQIHTF-ST----KSIL 191 (283)
Q Consensus 124 ---~~~~--~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~~~~~~~~~-~~----~~~l 191 (283)
.... +.+..+|.+...+.......|+.+.|.|.+.| +|.+ .++|+|++..+........... +. ...|
T Consensus 103 ~~~~~v~~~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l 182 (218)
T 2rgs_A 103 PIERTISKIKGLVRAPQVYILPPPAEQLSRKDVSLTCLVVGFNPGDISVEWTSNGHTEENYKDTAPVLDSDGSYFIYSKL 182 (218)
T ss_dssp CEEEEECCCCCCCBCCEEEEECCCGGGTTSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEE
T ss_pred cceEEEeecCCCCCCCEEEEECCChHHhcCCceEEEEEEEeeeCCCcEEEEEECCEeccCceecccEECCCCCEEEEEEE
Confidence 1111 24456777655444333345899999999998 5665 9999999988743211111111 11 1235
Q ss_pred EEcCCCCCCCEEEEEEEEeCCce
Q psy14060 192 IMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 192 ~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
.|.....+|.|.|+|.+.|....
T Consensus 183 ~v~~~~~~d~g~YtC~a~n~~l~ 205 (218)
T 2rgs_A 183 NMKTSKWEKTDSFSCNVRHEGLK 205 (218)
T ss_dssp EEEHHHHHHCSCEEEEEECTTSG
T ss_pred EECHHHcCCCCeEEEEEEcCCCC
Confidence 55544445689999999997643
No 318
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.62 E-value=4.8e-15 Score=118.22 Aligned_cols=155 Identities=12% Similarity=0.101 Sum_probs=97.8
Q ss_pred eeeecCcEEEEEEEccCccce-EEee---------------------c---CCCEEEEEc-CCEEEEEEccCCCCCCeEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT---------------------A---TETTEMEHK-GKIQERVVDASELDDDGYY 112 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~---------------------~---~~~~~~~~~-~~~~~L~i~~~~~~D~G~Y 112 (283)
.+.+|++++|.| ..+.+... .|.. . ..++.+... ....+|.|.+++.+|+|.|
T Consensus 13 ~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~~~D~G~Y 91 (245)
T 4ei6_B 13 IIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQPTALEDSAVY 91 (245)
T ss_dssp EEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECSCCGGGCEEE
T ss_pred EecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECCCCHhHCEEE
Confidence 467789999999 55555211 2221 0 155555432 3467999999999999999
Q ss_pred EEEEEecc-----eeeeeeccCC------CCCCeEE-ecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCC
Q psy14060 113 AITERKYY-----ALSDLSEQKP------AKPPVFT-KKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSP 178 (283)
Q Consensus 113 ~C~a~n~~-----~~~~~~~~~~------~~~p~~~-~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~ 178 (283)
.|.+.+.. .......+.+ ..+|.+. ..+....+..|+.+.|.|.+.|. |.+ .+.|+++|..+....
T Consensus 92 ~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v~W~~~g~~l~~~~ 171 (245)
T 4ei6_B 92 FCASSFWGAYAEQFFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGV 171 (245)
T ss_dssp EEEEECSSTTCCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTTE
T ss_pred EEEEccCCCcceEEEcCCcEEEEecccCCCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEEEEEECCEECCCCc
Confidence 99998531 1111111111 1355443 33444456678999999999885 445 899999998876421
Q ss_pred CeEE---E-----EeCC---EEEEEEcCCCCCC-CEEEEEEEEeCCce
Q psy14060 179 DFQI---H-----TFST---KSILIMRQVFMED-SGVFAVIAENRGGK 214 (283)
Q Consensus 179 ~~~~---~-----~~~~---~~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 214 (283)
.... . ..+. ...|.|.....+| .|.|+|.+.|....
T Consensus 172 ~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~g~ytC~v~~~~l~ 219 (245)
T 4ei6_B 172 CTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYGLS 219 (245)
T ss_dssp EECSSCEESSTTSTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ccccccccccccCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEECCCC
Confidence 1100 0 0011 1347888777777 89999999987543
No 319
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.61 E-value=7.2e-15 Score=117.21 Aligned_cols=140 Identities=14% Similarity=0.090 Sum_probs=95.2
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEe--------------CCEecCC----CCCeEEEEe-CCEEEEEEcC
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFR--------------EDFPITS----SPDFQIHTF-STKSILIMRQ 195 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k--------------~~~~~~~----~~~~~~~~~-~~~~~l~i~~ 195 (283)
.+...+....+..|+++.|.| ..+.+.+.+.||| ++..... ..++.+... ....+|.|.+
T Consensus 4 ~v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~ 82 (245)
T 4ei6_B 4 KVLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVERPDGSYFTLKIQP 82 (245)
T ss_dssp CCEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEECCTTSCEEEEECS
T ss_pred ceEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEeccCceEEEEECC
Confidence 445566778899999999999 6677889999998 2221111 145554432 3356899999
Q ss_pred CCCCCCEEEEEEEEeCC----ceeEEEEEEEEEeccCCCCCCCCCCeEE-ecCCceEEcCCCeEEEEEEEEee-CCC-ee
Q psy14060 196 VFMEDSGVFAVIAENRG----GKAKCSANLVVEEKRQGGRGGVVPPSFL-TTISSAVINVGQLARFDAKISAT-KPL-DV 268 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~----g~~~~~~~l~v~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v 268 (283)
+..+|+|.|.|.+.+.. ........|.|..... ...+|.+. ..+....+..|+.++|.|.+.|. |.+ .+
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~----~~~~p~~~~~~~~~~~~~~g~~v~l~C~~~g~~p~~~~v 158 (245)
T 4ei6_B 83 TALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLEDLK----NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVEL 158 (245)
T ss_dssp CCGGGCEEEEEEEECSSTTCCCEECCCEEEEEESCGG----GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEE
T ss_pred CCHhHCEEEEEEEccCCCcceEEEcCCcEEEEecccC----CCCCceEEEeCCCcccccCCCceEEEEEEeeEeCCCeEE
Confidence 99999999999998532 2233335666663100 00245444 33444456779999999999985 444 79
Q ss_pred EEeeCCEEecC
Q psy14060 269 YWLKVSSLSDV 279 (283)
Q Consensus 269 ~W~~~g~~l~~ 279 (283)
.|++||+.+..
T Consensus 159 ~W~~~g~~l~~ 169 (245)
T 4ei6_B 159 SWWVNGKEVHS 169 (245)
T ss_dssp EEEETTEEECT
T ss_pred EEEECCEECCC
Confidence 99999999864
No 320
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.61 E-value=7.4e-16 Score=117.95 Aligned_cols=121 Identities=11% Similarity=0.119 Sum_probs=84.1
Q ss_pred eecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcC-CCCCCCEEEEEEEEeCCceeEEEEEEE
Q psy14060 144 RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQ-VFMEDSGVFAVIAENRGGKAKCSANLV 222 (283)
Q Consensus 144 ~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~-~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 222 (283)
....|+++.|.|.+.+ +.+ +.|+|++..+.... ..+|.|.+ +..+|+|.|+|.|.|..|.......+.
T Consensus 10 v~~~G~~v~L~C~~~~-~~~-i~W~k~g~~l~~~~---------~~~L~I~~~~~~~D~G~Y~C~a~n~~g~~~~~~~~~ 78 (186)
T 1jbj_A 10 VSISGTSVELTCPLDS-DEN-LKWEKNGQELPQKH---------DKHLVLQDFSEVEDSGYYVCYTPASNKNTYLYLKAR 78 (186)
T ss_dssp EEEETTEEEEECSSCC-CTT-CEEEETTEEECSCC---------CSEEEEESCCTTTSCEEEEEECSSCCCCCCEEECCC
T ss_pred EEeCCcEEEEEEeCCC-CCc-eEEEECCEECCCCC---------CCEEEECCCCccccCEEEEEEEEeCCCcEEEEEEEE
Confidence 4467999999999987 444 99999999887531 12599999 999999999999999988855555554
Q ss_pred EEeccCCCCCC--------CCCCeEE----ecCCce---EEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 223 VEEKRQGGRGG--------VVPPSFL----TTISSA---VINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 223 v~~~~~~~~~~--------~~~p~~~----~~~~~~---~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
|.......... ..+|.+. ...... .+.+|+.+.|.|.+ |.|.|.|+|||+.+.
T Consensus 79 v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~v~l~C~~---p~p~i~W~k~g~~i~ 146 (186)
T 1jbj_A 79 VGSADDAKKDAAKKDDAKKDDAKKDGSQTNKAKNLVQVDGSRGDGSVLLTCGL---TDKTIKWLKDGSIIS 146 (186)
T ss_dssp CCSCCCCCCCCCCCCCCSCCSSSTTCCSCCCCSSCCEECCCSSSCEEEEECSS---SCSCEEEEETTEECC
T ss_pred EecccccccccccccccccCCccccccccccccccccceecCCCCeEEEEeeC---CCCeEEEEECCEECc
Confidence 44321110000 0011110 000112 24499999999998 889999999999986
No 321
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.61 E-value=2.2e-14 Score=116.82 Aligned_cols=156 Identities=12% Similarity=0.114 Sum_probs=99.8
Q ss_pred eeeecCcEEEEEEEccCccce-EEee-------------------------cCCCEEEEE-cCCEEEEEEccCCCCCCeE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT-------------------------ATETTEMEH-KGKIQERVVDASELDDDGY 111 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~-------------------------~~~~~~~~~-~~~~~~L~i~~~~~~D~G~ 111 (283)
.+.+|++++|.|.+.+.+... .|.. ...|+.+.. .....+|.|.+++.+|+|.
T Consensus 35 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~ 114 (279)
T 2wbj_D 35 ISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLTVTSAHPEDSSF 114 (279)
T ss_dssp EEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEEESSCCGGGCEE
T ss_pred EecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEEEccCCccCCEE
Confidence 467788999999998766222 2211 124555544 2457899999999999999
Q ss_pred EEEEEEecc---------eeeeeeccCC----CCCCeEEec-CCceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEecC
Q psy14060 112 YAITERKYY---------ALSDLSEQKP----AKPPVFTKK-IQPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPIT 175 (283)
Q Consensus 112 Y~C~a~n~~---------~~~~~~~~~~----~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~ 175 (283)
|+|.+.|.. +......+.. ..+|.+... +....+..|+.+.|.|.+.+. |. +.+.|++++..+.
T Consensus 115 Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~g~~l~ 194 (279)
T 2wbj_D 115 YICSARDLTSGANNEQFFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVH 194 (279)
T ss_dssp EEEEEEETTCBTSCCEEECCCEEEEEESCGGGCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBSSCEEEEEEETTEECC
T ss_pred EEEEEcccccCCccceeeCCCEEEEEecCCCCCCCCEEEEECCCcccccCCCceEEEEEEeeEcCCCcEEEEEECCEECC
Confidence 999999831 1111111111 235655432 333345578899999999987 43 6999999998875
Q ss_pred CCCCeE---EE-----EeCC---EEEEEEcCCCCCC-CEEEEEEEEeCCce
Q psy14060 176 SSPDFQ---IH-----TFST---KSILIMRQVFMED-SGVFAVIAENRGGK 214 (283)
Q Consensus 176 ~~~~~~---~~-----~~~~---~~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 214 (283)
...... .. ..+. .+.|.|......| .|.|+|.+.|....
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~s~L~i~~~~~~d~~~~YtC~v~n~~~~ 245 (279)
T 2wbj_D 195 SGVSTDPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 245 (279)
T ss_dssp TTEEECSSCEESSTTSTTCCEEEEEEEECCSTTTTCTTCEEEEEEEECCBC
T ss_pred CCcccccccccccccCCCCcEEEEEEEEEChHHhccCCCEEEEEEEeCCCC
Confidence 431100 00 0111 2347787777654 67899999997654
No 322
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.61 E-value=3.6e-15 Score=120.67 Aligned_cols=155 Identities=11% Similarity=0.077 Sum_probs=98.2
Q ss_pred eeeecCcEEEEEEEccCc-cceEEeec------------------------CCCEEEEE-cCCEEEEEEccCCCCCCeEE
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EIVRKITA------------------------TETTEMEH-KGKIQERVVDASELDDDGYY 112 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i~~~~~~------------------------~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y 112 (283)
.+.+|++++|.|.+.... .+ .|... ..++.+.. ..+..+|.|.+++.+|+|.|
T Consensus 37 ~v~~G~~v~L~C~~~~~~~~v-~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~v~~~D~G~Y 115 (268)
T 3pl6_D 37 VTEKGKYVELRCDPISGHTAL-YWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQRTERGDSAVY 115 (268)
T ss_dssp EEETTCCEEEEEBCBTTCCEE-EEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECSCCGGGCEEE
T ss_pred EecCCCCEEEEEEeCCCCceE-EEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECCCCcccCEEE
Confidence 367788999999986432 22 22210 05555553 23468899999999999999
Q ss_pred EEEEEec--ce-eeeeeccC------CCCCCeEEe-cCCceeecCCCcEEEEEEEeeecCC--EEEEEeCCEecCCCCCe
Q psy14060 113 AITERKY--YA-LSDLSEQK------PAKPPVFTK-KIQPCRAFEQDQARFEVEFDGDPLP--TIKWFREDFPITSSPDF 180 (283)
Q Consensus 113 ~C~a~n~--~~-~~~~~~~~------~~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~~--~~~W~k~~~~~~~~~~~ 180 (283)
+|.+.+. .. ......+. ...+|.+.. .+....+..|+.++|.|.+.+.+++ .+.|+++|..+......
T Consensus 116 ~C~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~~~g~~l~~~~~~ 195 (268)
T 3pl6_D 116 LCATSALGDTQYFGPGTRLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVCT 195 (268)
T ss_dssp EEEEESSSSSCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEESSSEECTTEEE
T ss_pred EEEEecCCCceeeCCcEEEEEecCcccccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEEEECCEECCCCeEe
Confidence 9999873 11 11111111 222555433 3444456668999999999986554 89999999887542110
Q ss_pred EE--E------EeCC---EEEEEEcCCCCCC-CEEEEEEEEeCCce
Q psy14060 181 QI--H------TFST---KSILIMRQVFMED-SGVFAVIAENRGGK 214 (283)
Q Consensus 181 ~~--~------~~~~---~~~l~i~~~~~~d-~G~Y~C~a~n~~g~ 214 (283)
.. . ..+. .+.|.|.....+| .|.|+|.+.|....
T Consensus 196 ~~~~~~~~~~~~~~~~~~~s~l~i~~~~~~d~~g~YtC~v~~~~l~ 241 (268)
T 3pl6_D 196 DPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 241 (268)
T ss_dssp CSSCEESSTTCTTCCEEEEEEEEEEHHHHSCTTCEEEEEEEECCBC
T ss_pred ccccccccccCCCCcEEEEEEEEEcHHHhccCCCEEEEEEEcCCCC
Confidence 00 0 0001 1347777777777 99999999987543
No 323
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.61 E-value=9.3e-15 Score=116.73 Aligned_cols=138 Identities=15% Similarity=0.173 Sum_probs=93.7
Q ss_pred EEecCCceeecCCCcEEEEEEEeeec-----CCEEEEEeCC--Ee---cC---------CCCCeEEEEeCCEEEEEEcCC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDP-----LPTIKWFRED--FP---IT---------SSPDFQIHTFSTKSILIMRQV 196 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p-----~~~~~W~k~~--~~---~~---------~~~~~~~~~~~~~~~l~i~~~ 196 (283)
+...+..+.+..|++++|.|.+.+.| .+.+.|+|+. .. +. ...++.+.......+|.|.++
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v 83 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSGSGTDFTLKISRV 83 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSC
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEeccCCCEEEEEECCC
Confidence 45556778899999999999999877 6889999842 11 10 134566665666778999999
Q ss_pred CCCCCEEEEEEEEeCCcee-EEEEEEEEEeccCC---CCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeC--CCeeEE
Q psy14060 197 FMEDSGVFAVIAENRGGKA-KCSANLVVEEKRQG---GRGGVVPPSFLTTISSAVINVGQLARFDAKISATK--PLDVYW 270 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~~---~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p--~~~v~W 270 (283)
..+|+|.|.|.+.|..+.. .....|.|...... ......++.....+....+.+|++++|.|.+.+.+ .+.+.|
T Consensus 84 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W 163 (247)
T 1svz_A 84 EAEDLGIYYCFQGSHFPPTFGGGTKLEIKGGGGSGGGGSGGGGSEVQLQQSGPELKKPGETVKISCKATNYAFTDYSMHW 163 (247)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEEC---------------CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEE
T ss_pred CHHHCEEEEEEEccCCccEECCCEEEEEECCccccccccccccCceEEeCCCceeecCCCcEEEEEEEcCcccCCcEEEE
Confidence 9999999999999875532 22345666542100 00000123333344455699999999999999875 468999
Q ss_pred eeC
Q psy14060 271 LKV 273 (283)
Q Consensus 271 ~~~ 273 (283)
+++
T Consensus 164 ~k~ 166 (247)
T 1svz_A 164 VKQ 166 (247)
T ss_dssp EEE
T ss_pred EEe
Confidence 996
No 324
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.61 E-value=2.3e-15 Score=121.18 Aligned_cols=138 Identities=15% Similarity=0.186 Sum_probs=94.1
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Ee---cC-------------CCCCeEEEEe--CCEEEEEEcCCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FP---IT-------------SSPDFQIHTF--STKSILIMRQVF 197 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~---~~-------------~~~~~~~~~~--~~~~~l~i~~~~ 197 (283)
+....+.+|++++|.|.+.+.| .+.+.|+|++ .. +. ...++.+... ....+|.|.++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (257)
T 1f3r_B 7 SGPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQ 86 (257)
T ss_dssp ECCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCC
T ss_pred CCCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 3456789999999999999875 6889999852 11 10 1245655543 456789999999
Q ss_pred CCCCEEEEEEEEeCCc-------ee--EEEEEEEEEeccCCC-----CCCCCCCeEEecCCceEEcCCCeEEEEEEEEee
Q psy14060 198 MEDSGVFAVIAENRGG-------KA--KCSANLVVEEKRQGG-----RGGVVPPSFLTTISSAVINVGQLARFDAKISAT 263 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~g-------~~--~~~~~l~v~~~~~~~-----~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~ 263 (283)
.+|+|.|.|.+.|..| .. .....|.|....... .....++.+...+....+.+|++++|.|.+.+.
T Consensus 87 ~~DsG~Y~C~a~n~~g~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 166 (257)
T 1f3r_B 87 TDDTGTYYCTRDLYGGYPLGFWYFDFWGPGTMVTVSSGGGGSGGGGSGGGGSDIKLTQSPSLLSASVGDRVTLSCKGSQN 166 (257)
T ss_dssp TTCCEEEEEEEESSSSCCSSCCCEEEECCCEEEEECSSCCSSCCSSSCCCCCEECSCEETSEECCCTTCCEEEEEECSSC
T ss_pred cccCEEEEEEEcccccCccccccccccCCceEEEEEeCCccccccccCCCccceEEEccCCEEEEcCCCCEEEEEEECCc
Confidence 9999999999999854 11 123466665421000 000011234444556678999999999999998
Q ss_pred CCCeeEEee--CCEEe
Q psy14060 264 KPLDVYWLK--VSSLS 277 (283)
Q Consensus 264 p~~~v~W~~--~g~~l 277 (283)
|.+.+.|++ +|..+
T Consensus 167 ~~~~v~W~k~~~g~~~ 182 (257)
T 1f3r_B 167 INNYLAWYQQKLGEAP 182 (257)
T ss_dssp CBTCEEEEEECTTSCC
T ss_pred CCCcEEEEEECCCCCc
Confidence 888999999 66543
No 325
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.61 E-value=4.7e-15 Score=124.42 Aligned_cols=133 Identities=11% Similarity=0.094 Sum_probs=96.1
Q ss_pred cCCceeecCCCcEEEEEEEeeec--CCEEEEEeC--CEec-----------------CCCCCeEEEEe--CCEEEEEEcC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRE--DFPI-----------------TSSPDFQIHTF--STKSILIMRQ 195 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~--~~~~-----------------~~~~~~~~~~~--~~~~~l~i~~ 195 (283)
.+....+..|+.+.|.|.+.+.+ .+.+.|||+ +..+ ....++.+... ....+|.|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 34567889999999999998863 578999986 3221 01245655543 3457899999
Q ss_pred CCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CC-CeeEEeeC
Q psy14060 196 VFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KP-LDVYWLKV 273 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~-~~v~W~~~ 273 (283)
+..+|+|.|.|.+.|..+.......|.|.... ..+|.+...+....+.+|+.++|.|.+.|. |. +.+.|+++
T Consensus 86 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~k~ 159 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAYWGQGTLVTVSSAS------TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNSG 159 (344)
T ss_dssp CCGGGCEEEEEEETTTTCEECCCEEEEECSSC------CBCCEEEEECCSCTTTSSSEEEEEEEEEEEBSSCCCEEETTT
T ss_pred CCcccCEEEEEEEecCcceecCcEEEEEecCC------CCCCeEEEccccccccCCCcEEEEEEEeeEECCCeEEEEecC
Confidence 99999999999999865444445667776311 124555544434456899999999999997 54 68999999
Q ss_pred CEEe
Q psy14060 274 SSLS 277 (283)
Q Consensus 274 g~~l 277 (283)
|..+
T Consensus 160 g~~~ 163 (344)
T 1za6_B 160 ALTS 163 (344)
T ss_dssp TBCT
T ss_pred CccC
Confidence 9764
No 326
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.60 E-value=6.4e-15 Score=117.46 Aligned_cols=161 Identities=12% Similarity=0.054 Sum_probs=99.4
Q ss_pred eeeecCcEEEEEEEccC--c--cceEEee-------------------------cCCCEEEEEcC--CEEEEEEccCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGD--K--EIVRKIT-------------------------ATETTEMEHKG--KIQERVVDASELD 107 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~--~--~i~~~~~-------------------------~~~~~~~~~~~--~~~~L~i~~~~~~ 107 (283)
.+.+|++++|.|.+.+. + .+. |.. ...|+.+.... ...+|.|.+++.+
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~v~-W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 90 (242)
T 1hxm_B 12 TKTLSKTARLECVVSGITISATSVY-WYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTIHNVEKQ 90 (242)
T ss_dssp EEETTCCEEEEEEEESSCTTTSCEE-EEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEECSCCGG
T ss_pred EecCCCcEEEEEEeCCccccCceEE-EEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEECCCCcc
Confidence 36678899999999875 2 332 211 23455554322 4789999999999
Q ss_pred CCeEEEEEEEecc------e--eeeeeccCCCC-------CCeEEe-cCCceeecCCCcEEEEEEEeee-cC-CEEEEEe
Q psy14060 108 DDGYYAITERKYY------A--LSDLSEQKPAK-------PPVFTK-KIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFR 169 (283)
Q Consensus 108 D~G~Y~C~a~n~~------~--~~~~~~~~~~~-------~p~~~~-~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k 169 (283)
|+|.|.|.+.+.. . ......+.+.. +|.... .+....+..|+.+.|.|.+.|. |. +.+.|++
T Consensus 91 D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~~ 170 (242)
T 1hxm_B 91 DIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLDADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFFPDVIKIHWEE 170 (242)
T ss_dssp GCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCCSCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEESSCCEEEEEEE
T ss_pred cCEEEEEeeecCCccccccceeEcCcEEEEEcccccCCCcCCCceEECCChhhcccCCCceEEEEEeeEECCCeEEEEEc
Confidence 9999999988752 1 11111222211 232221 2333445679999999999986 64 6899999
Q ss_pred CCE-ecCCCCCeEEEEeCC----EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEE
Q psy14060 170 EDF-PITSSPDFQIHTFST----KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLV 222 (283)
Q Consensus 170 ~~~-~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 222 (283)
++. .+.......+...+. .+.|.|..... + |.|+|.+.|..+.......+.
T Consensus 171 ~~~~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-g~y~C~v~n~~~~~~~~~~~~ 226 (242)
T 1hxm_B 171 KKSNTILGSQEGNTMKTNDTYMKFSWLTVPEKSL-D-KEHRCIVRHENNKNGVDQEII 226 (242)
T ss_dssp SSSCCCCCCEECCCEECSSSEEEEEEEEECTGGG-G-SCEEEEEEETTSGGGSCEEEE
T ss_pred CCCEeecCccccceecCCCcEEEEEEEEEccccC-C-CEEEEEEEeCCCCCCceeEee
Confidence 987 553321000111111 24688877664 4 999999999987654444443
No 327
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.60 E-value=9.7e-15 Score=115.08 Aligned_cols=132 Identities=13% Similarity=0.087 Sum_probs=92.8
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Eec-----------------CCCCCeEEEEe--CCEEEEEEcCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FPI-----------------TSSPDFQIHTF--STKSILIMRQV 196 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~~-----------------~~~~~~~~~~~--~~~~~l~i~~~ 196 (283)
+....+..|++++|.|.+.+.+ .+.+.|||+. ..+ ....++.+... ....+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 4557889999999999998765 6789999853 211 01235555543 34578999999
Q ss_pred CCCCCEEEEEEEEeCCc-----e---eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-
Q psy14060 197 FMEDSGVFAVIAENRGG-----K---AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL- 266 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~g-----~---~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~- 266 (283)
..+|+|.|.|.+.|..+ . ......|.|.... ..+|.+........+..|+.++|.|.+.|. |.|
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~ 160 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSPAS------TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 160 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEESCS------CBCCEEEEECCCTTCCCCCEEEEEEEEEEEBSSCC
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEecccCC------CcCCeEEEecccccccCCCcEEEEEEEEeEECCCe
Confidence 99999999999999764 2 1123567776411 124555432222235789999999999987 766
Q ss_pred eeEEeeCCEEe
Q psy14060 267 DVYWLKVSSLS 277 (283)
Q Consensus 267 ~v~W~~~g~~l 277 (283)
.|.|+++|..+
T Consensus 161 ~v~W~~~~~~~ 171 (225)
T 1op3_H 161 TVSWNSGALTS 171 (225)
T ss_dssp EEECCTTSCCT
T ss_pred EEEEecCCCcC
Confidence 89999999763
No 328
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.60 E-value=6.4e-16 Score=122.36 Aligned_cols=134 Identities=13% Similarity=0.038 Sum_probs=93.2
Q ss_pred CCceeecCCCcEEEEEEEeeec-CC-EEEEEeCC--Eec------------CCCCCeEEEEeCCEEEEEEcCCCCCCCEE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP-LP-TIKWFRED--FPI------------TSSPDFQIHTFSTKSILIMRQVFMEDSGV 203 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p-~~-~~~W~k~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 203 (283)
+....+..|+++.|.|.+.+.+ .+ .+.|||++ ..+ ....++.+.......+|.|.++..+|+|.
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~D~G~ 105 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSKSGTSASLAISGLRSEDEAD 105 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEEETTEEEEEEESCCSTTCSE
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEecCCeEEEEECCCCHHHCEE
Confidence 5567788999999999998754 34 79999863 211 01245666555667789999999999999
Q ss_pred EEEEEEeCCce---eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC--eeEEeeCCEEec
Q psy14060 204 FAVIAENRGGK---AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL--DVYWLKVSSLSD 278 (283)
Q Consensus 204 Y~C~a~n~~g~---~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~--~v~W~~~g~~l~ 278 (283)
|.|.+.|..+. ......|.|.... ..+|.+...+....+..|+.++|.|.+.|.+++ .++|++||+.+.
T Consensus 106 Y~C~~~~~~~~~~~~~~~~~l~V~~~~------~~~p~v~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W~k~g~~l~ 179 (234)
T 2j6e_L 106 YYCATWDDSLSAVIFGGGTKLTVLGQP------KAAPSVTLFPPSSEELQANKATLVCLISDFFPGAVTVAWKADGAPVK 179 (234)
T ss_dssp EEEEEEETTTTEEEECCCBCCCBCCCC------CCCCCCCEECCCHHHHTTSCCCEEECCCBCSSCCCEEEEEETTEECC
T ss_pred EEEEEEcCCcceeEecCCEEEEEecCC------CCCCcccccCCChhHhcCCceEEEEEEEEEcCCceEEEEEECCEECC
Confidence 99999998772 2222445443210 134555443333334568899999999986443 899999999875
Q ss_pred C
Q psy14060 279 V 279 (283)
Q Consensus 279 ~ 279 (283)
.
T Consensus 180 ~ 180 (234)
T 2j6e_L 180 A 180 (234)
T ss_dssp S
T ss_pred C
Confidence 3
No 329
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=2.1e-14 Score=101.39 Aligned_cols=95 Identities=22% Similarity=0.360 Sum_probs=80.0
Q ss_pred CCCCCeEEe---cCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEE
Q psy14060 130 PAKPPVFTK---KIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAV 206 (283)
Q Consensus 130 ~~~~p~~~~---~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 206 (283)
+..+|.+.. ......+..|+.+.|.|.+.|.|.|.+.|+|++..+. ..++.+........|.|.++..+|+|.|+|
T Consensus 18 v~~~P~i~~~~~~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g~~l~-~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C 96 (118)
T 2e7c_A 18 IAEPPKIRLPRHLRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGGAPLD-TSRVHVRTSDFDTVFFVRQAARSDSGEYEL 96 (118)
T ss_dssp CSEEEEECCCTTTSSCEEEESSSCEEEEEEEEEESCCEEEEEETTEECC-CSSCEEEECSSEEEEEESSCCTTTCEEEEE
T ss_pred eccCCeEecCcccCCCEEEECCCEEEEEEEEccCCCCEEEEEECCEECC-CCcEEEEECCCeEEEEECCCChhcCEEEEE
Confidence 344666654 2456788999999999999999999999999999986 345666666677789999999999999999
Q ss_pred EEEeCCceeEEEEEEEEEe
Q psy14060 207 IAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 207 ~a~n~~g~~~~~~~l~v~~ 225 (283)
.|.|..|.....+.|.|..
T Consensus 97 ~a~N~~G~~~~~~~l~V~~ 115 (118)
T 2e7c_A 97 SVQIENMKDTATIRIRVVE 115 (118)
T ss_dssp EEECSSCEECCEEEEEEEC
T ss_pred EEEeCCCeEEEEEEEEEEc
Confidence 9999999888888888875
No 330
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.60 E-value=9e-15 Score=119.33 Aligned_cols=140 Identities=12% Similarity=0.135 Sum_probs=97.2
Q ss_pred EecCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--EecC-----------------CCCCeEEEEe--CCEEEEEE
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FPIT-----------------SSPDFQIHTF--STKSILIM 193 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~~~-----------------~~~~~~~~~~--~~~~~l~i 193 (283)
+..+....+.+|++++|.|.+.+.+ .+.+.|||++ ..+. ...++.+... ....+|.|
T Consensus 30 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 109 (282)
T 1qok_A 30 LQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQL 109 (282)
T ss_dssp EEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEE
T ss_pred EECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEE
Confidence 3455677899999999999998864 5889999953 1110 1235555543 34578999
Q ss_pred cCCCCCCCEEEEEEEEeCCc---ee--EEEEEEEEEeccCCC-----CCCCCCCeEEecCCceEEcCCCeEEEEEEEEee
Q psy14060 194 RQVFMEDSGVFAVIAENRGG---KA--KCSANLVVEEKRQGG-----RGGVVPPSFLTTISSAVINVGQLARFDAKISAT 263 (283)
Q Consensus 194 ~~~~~~d~G~Y~C~a~n~~g---~~--~~~~~l~v~~~~~~~-----~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~ 263 (283)
.++..+|+|.|+|.+.|..| .. .....|.|....... .....++.+...+....+.+|++++|.|.+.+.
T Consensus 110 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 189 (282)
T 1qok_A 110 SSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSSGGGGSGGGGSGGGGSENVLTQSPAIMSASPGEKVTITCSASSS 189 (282)
T ss_dssp CSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC---------------CCCEEEECSEEEECTTCCEEEEEEESSC
T ss_pred CcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEecCCcccCCccCCCCccceEEecCCCEEEEcCCCcEEEEEEecCC
Confidence 99999999999999999865 11 123466766421000 000023556666777789999999999999998
Q ss_pred CCCeeEEee--CCEEe
Q psy14060 264 KPLDVYWLK--VSSLS 277 (283)
Q Consensus 264 p~~~v~W~~--~g~~l 277 (283)
| +.+.|+| +|+.+
T Consensus 190 ~-~~v~W~k~~~g~~~ 204 (282)
T 1qok_A 190 V-SYMHWFQQKPGTSP 204 (282)
T ss_dssp C-SCCEEEEECTTSCC
T ss_pred C-ceEEEEEECCCCCc
Confidence 8 8999999 66544
No 331
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.60 E-value=5.9e-15 Score=119.40 Aligned_cols=140 Identities=16% Similarity=0.110 Sum_probs=94.9
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeC--CEec------------CCC----CCeEEEEe-CCEEEEEEcC
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRE--DFPI------------TSS----PDFQIHTF-STKSILIMRQ 195 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~--~~~~------------~~~----~~~~~~~~-~~~~~l~i~~ 195 (283)
.+...+....+..|++++|.|.+. .+.+.+.|||. +... ... .++.+... ....+|.|.+
T Consensus 28 ~v~~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~I~~ 106 (268)
T 3pl6_D 28 GVSQTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVRPEGSVSTLKIQR 106 (268)
T ss_dssp SCBCCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEECTTSSSEEEEECS
T ss_pred eeEeCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEecCCCEEEEEECC
Confidence 344455667899999999999986 47789999982 2111 110 34444432 2356899999
Q ss_pred CCCCCCEEEEEEEEeC--CceeEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEEEEeeCCC--eeEE
Q psy14060 196 VFMEDSGVFAVIAENR--GGKAKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKISATKPL--DVYW 270 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~--~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~~~g~p~~--~v~W 270 (283)
+..+|+|.|+|.+.+. .........+.|..... ...+|.+.. .+....+..|+.++|.|.+.|.+++ .+.|
T Consensus 107 v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~p~~~~v~W 182 (268)
T 3pl6_D 107 TERGDSAVYLCATSALGDTQYFGPGTRLTVLEDLK----NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 182 (268)
T ss_dssp CCGGGCEEEEEEEESSSSSCEECCCEEEEEESCGG----GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred CCcccCEEEEEEEecCCCceeeCCcEEEEEecCcc----cccCCceEEeCCCcccccCCCceEEEEEECcccCCCeEEEE
Confidence 9999999999999974 22333345566664100 012455443 3444456679999999999996655 8999
Q ss_pred eeCCEEecC
Q psy14060 271 LKVSSLSDV 279 (283)
Q Consensus 271 ~~~g~~l~~ 279 (283)
++||+.+..
T Consensus 183 ~~~g~~l~~ 191 (268)
T 3pl6_D 183 WVNGKEVHS 191 (268)
T ss_dssp EESSSEECT
T ss_pred EECCEECCC
Confidence 999998854
No 332
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.60 E-value=2.9e-15 Score=103.75 Aligned_cols=94 Identities=28% Similarity=0.512 Sum_probs=84.0
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+....++.+........|.|.++..+|+|.|+|.+.|
T Consensus 12 ~~~~~i~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N 91 (106)
T 1nct_A 12 TLAARILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISSVQASDEGNYSVVVEN 91 (106)
T ss_dssp SCCCEEEECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSSCCTTCSSEEEEECSSEEEEEECCCCSSCCSEEEECCBC
T ss_pred CCCCEEEECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCEEEEECCCEEEEEECcCCchhCEEEEEEEEe
Confidence 45788888889999999999999999999999999999999988877788777766678999999999999999999999
Q ss_pred CCceeEEEEEEEEE
Q psy14060 211 RGGKAKCSANLVVE 224 (283)
Q Consensus 211 ~~g~~~~~~~l~v~ 224 (283)
..|.....+.|.|.
T Consensus 92 ~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 92 SEGKQEAEFTLTIQ 105 (106)
T ss_dssp SSCBCCEEEEEEEC
T ss_pred CCCeEEEEEEEEEE
Confidence 99998888887764
No 333
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.59 E-value=1.6e-14 Score=114.86 Aligned_cols=139 Identities=15% Similarity=0.137 Sum_probs=94.3
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCCEEEEEeC--------------CEecC---CCCCeEEEEe-CCEEEEEEcCCC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRE--------------DFPIT---SSPDFQIHTF-STKSILIMRQVF 197 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~--------------~~~~~---~~~~~~~~~~-~~~~~l~i~~~~ 197 (283)
+...+....+.+|+.+.|.|.+.+ +.+.+.|||. +.... ...++.+... ....+|.|.++.
T Consensus 5 v~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~sL~I~~v~ 83 (240)
T 3q5y_A 5 VVQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQFDDYHSEMNMSALE 83 (240)
T ss_dssp CEEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEECTTSCEEEEECSCC
T ss_pred cccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeCCCCEEEEEECcCC
Confidence 445566788999999999999876 7889999982 11111 1235555442 345689999999
Q ss_pred CCCCEEEEEEEEeCC---ceeEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEEEEe-eCCC-eeEEe
Q psy14060 198 MEDSGVFAVIAENRG---GKAKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKISA-TKPL-DVYWL 271 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~---g~~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~~~g-~p~~-~v~W~ 271 (283)
.+|+|.|.|.+.+.. ........+.|..... ...+|.+.. .+....+..|+.+.|.|.+.| .|.+ .+.|+
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~----~~~~p~~~~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~W~ 159 (240)
T 3q5y_A 84 LEDSAMYFCASSLRWGDEQYFGPGTRLTVLEDLR----NVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWW 159 (240)
T ss_dssp GGGCEEEEEEEESSTTBCCEECCCEEEEEESCGG----GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred hhHCEEEEEEEccCCCcceEEcCCEEEEEecccc----CCCCCeeEEeCCchhhcccCCceEEEEEEeeEECCCeEEEEE
Confidence 999999999998322 1222334566653100 012455543 344445667999999999998 5556 78999
Q ss_pred eCCEEecC
Q psy14060 272 KVSSLSDV 279 (283)
Q Consensus 272 ~~g~~l~~ 279 (283)
+||+.+..
T Consensus 160 ~~g~~l~~ 167 (240)
T 3q5y_A 160 VNGKEVHS 167 (240)
T ss_dssp ETTEEECT
T ss_pred ECCEECcC
Confidence 99999854
No 334
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.59 E-value=2.1e-14 Score=114.51 Aligned_cols=136 Identities=12% Similarity=0.016 Sum_probs=97.8
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
..+|.+...+.. .+..|++++|.|.+.+ +.+.+.|||++..+..... ..........|.|.+++.+|+|.|.|.+.|
T Consensus 5 ~~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g~~~~~~~~-~~~~~~~~~~L~I~~v~~~DsG~Y~C~~~~ 81 (242)
T 1p6f_A 5 LPKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEGSLFAVDRP-KPPERINKVKFYIPDMNSRMAGQYSCIYRV 81 (242)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTEEEEEECC-SSCTTCCEEEEEECSCCGGGCEEEEEEEEE
T ss_pred CCCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECCCccccccc-cccCCcceeEEEecCCCcccCeEEEEEEec
Confidence 347777777766 8899999999999875 5678999999986531000 000012355799999999999999999988
Q ss_pred CCcee--EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 211 RGGKA--KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 211 ~~g~~--~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
..+.. +..+.|.|.... .+|.+...+ ...+.+|++++|.|.+.+. .+.+.|+|+|+.+.
T Consensus 82 ~~~~s~~S~~~~L~V~~~~-------~~P~i~~~p-~~~v~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~ 142 (242)
T 1p6f_A 82 GELWSEPSNLLDLVVTEMY-------DTPTLSVHP-GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSH 142 (242)
T ss_dssp TTEECCCCCCEEEEEECCS-------CCCEEEEES-CSEEETTCEEEEEEECTTS-CSEEEEEECSSSCE
T ss_pred CCccccCCcceEEEeeccc-------CCCceEccC-CCccCCCCcEEEEEecCCC-CCEEEEEECCCccC
Confidence 75432 334667776421 256666544 4568999999999998763 56899999997653
No 335
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.59 E-value=1.9e-14 Score=113.64 Aligned_cols=133 Identities=11% Similarity=0.056 Sum_probs=89.1
Q ss_pred cCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Ee---c---C-----------CCCCeEEEEe--CCEEEEEEcC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FP---I---T-----------SSPDFQIHTF--STKSILIMRQ 195 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~---~---~-----------~~~~~~~~~~--~~~~~l~i~~ 195 (283)
.+....+..|++++|.|.+.+.+ .+.+.|||++ .. + . ...++.+... ....+|.|.+
T Consensus 6 qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (227)
T 1mju_H 6 QPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLSS 85 (227)
T ss_dssp CCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEECC
Confidence 45567889999999999998865 6789999863 11 1 0 0235555443 3467899999
Q ss_pred CCCCCCEEEEEEEEeCCcee-EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeEEee
Q psy14060 196 VFMEDSGVFAVIAENRGGKA-KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVYWLK 272 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~~ 272 (283)
+..+|+|.|.|.+.+..+.. .....|.|.... ..+|.+........+..|+.++|.|.+.|. |.+ .+.|++
T Consensus 86 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 159 (227)
T 1mju_H 86 LTSDDSAVYYCANKLGWFPYWGQGTLVTVSAAK------TTAPSVYPLAPVCGDTSGSSVTLGCLVKGYFPEPVTLTWNS 159 (227)
T ss_dssp CCGGGCEEEEEEEEETTEEEECCCEEEEECSSC------CBCCEEEEECCCC------CEEEEEEEEEEBSSCCEEEEGG
T ss_pred CCcccCEEEEEEECCCCceEEcCcEEEEEcCCC------CCCCEEEEecCCccccCCCcEEEEEEeecEeCCCeEEEEec
Confidence 99999999999999864321 122466665310 124555543333456789999999999986 766 899999
Q ss_pred CCEEe
Q psy14060 273 VSSLS 277 (283)
Q Consensus 273 ~g~~l 277 (283)
+|+.+
T Consensus 160 ~g~~~ 164 (227)
T 1mju_H 160 GSLSS 164 (227)
T ss_dssp GTBCT
T ss_pred CCCcC
Confidence 99764
No 336
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.59 E-value=1.5e-14 Score=116.30 Aligned_cols=141 Identities=13% Similarity=0.143 Sum_probs=99.1
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeee--cCCEEEEEeCC--Eec-----------------CCCCCeEEEEe--CCE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGD--PLPTIKWFRED--FPI-----------------TSSPDFQIHTF--STK 188 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~--~~~-----------------~~~~~~~~~~~--~~~ 188 (283)
.++.+...+..+.+.+|++++|.|.+.+. +.+.+.|||.. ..+ ....++.+... ...
T Consensus 5 ~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 84 (256)
T 3juy_B 5 HHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANT 84 (256)
T ss_dssp --CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTE
T ss_pred cceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCCE
Confidence 35667777888999999999999999883 67889999742 110 01235555533 346
Q ss_pred EEEEEcCCCCCCCEEEEEEEEeC------------CceeEEEEEEEEEeccCCC-----CCCCCCCeEEecCCceEEcCC
Q psy14060 189 SILIMRQVFMEDSGVFAVIAENR------------GGKAKCSANLVVEEKRQGG-----RGGVVPPSFLTTISSAVINVG 251 (283)
Q Consensus 189 ~~l~i~~~~~~d~G~Y~C~a~n~------------~g~~~~~~~l~v~~~~~~~-----~~~~~~p~~~~~~~~~~v~~g 251 (283)
.+|.|.++..+|+|.|+|.+.|. .........|.|....... .....+|.+...+....+.+|
T Consensus 85 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G 164 (256)
T 3juy_B 85 AYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSGGGGSGGGGSGGGGSEIVLTQAPGTLSLSPG 164 (256)
T ss_dssp EEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSCC----------CCCCCCEEEECSEEEECTT
T ss_pred EEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCCcccccccccCCCcceeEEEecCCeEEEeCC
Confidence 68999999999999999999986 2223334566665421000 000014567777888899999
Q ss_pred CeEEEEEEEEeeCC-CeeEEee
Q psy14060 252 QLARFDAKISATKP-LDVYWLK 272 (283)
Q Consensus 252 ~~v~L~C~~~g~p~-~~v~W~~ 272 (283)
++++|.|.+.+.|. +.+.|++
T Consensus 165 ~~v~L~C~~~~~~~~~~v~W~k 186 (256)
T 3juy_B 165 ERATFSCRSSHSIRSRRVAWYQ 186 (256)
T ss_dssp SCEEEEEEESSCCTTCCEEEEE
T ss_pred CCEEEEEEECCCcCCeeEEEEE
Confidence 99999999998776 7999998
No 337
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.59 E-value=3.6e-14 Score=114.00 Aligned_cols=140 Identities=13% Similarity=0.150 Sum_probs=95.1
Q ss_pred CeEEecCCceeecCCCcEEEEEEEeee--cCCEEEEEeCC--E---ec-------------CCCCCeEEEEe--CCEEEE
Q psy14060 134 PVFTKKIQPCRAFEQDQARFEVEFDGD--PLPTIKWFRED--F---PI-------------TSSPDFQIHTF--STKSIL 191 (283)
Q Consensus 134 p~~~~~~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~--~---~~-------------~~~~~~~~~~~--~~~~~l 191 (283)
...+..+....+.+|++++|.|.+.+. +.+.+.|||.. . .+ ....++.+... ....+|
T Consensus 9 ~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 88 (257)
T 3gkz_A 9 EVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQVYL 88 (257)
T ss_dssp CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTEEEE
T ss_pred cEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCceEEE
Confidence 334445566779999999999999884 47899999832 1 11 01234555442 345689
Q ss_pred EEcCCCCCCCEEEEEEEEeCC----ceeEEEEEEEEEeccCC----CCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee
Q psy14060 192 IMRQVFMEDSGVFAVIAENRG----GKAKCSANLVVEEKRQG----GRGGVVPPSFLTTISSAVINVGQLARFDAKISAT 263 (283)
Q Consensus 192 ~i~~~~~~d~G~Y~C~a~n~~----g~~~~~~~l~v~~~~~~----~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~ 263 (283)
.|.++..+|+|.|+|.+.|.. ........|.|...... ......++.+...+....+.+|++++|.|.+.+.
T Consensus 89 ~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~ 168 (257)
T 3gkz_A 89 QLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGGGGSGGGGSGGGGSQIVLTQSPAIMSASPGEKVTLTCSASSS 168 (257)
T ss_dssp EECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC---------CTTCCCCCCEECSCSEEEECTTCCEEEEEEESSC
T ss_pred EECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCchhhcccccCCCccceEEEcCCceEEEeCCCcEEEEEEEccC
Confidence 999999999999999999972 22223355666542000 0000024566666777889999999999999998
Q ss_pred CCC-eeEEeeC
Q psy14060 264 KPL-DVYWLKV 273 (283)
Q Consensus 264 p~~-~v~W~~~ 273 (283)
|.+ .+.|++.
T Consensus 169 ~~~~~v~W~k~ 179 (257)
T 3gkz_A 169 VSSSHLYWYQQ 179 (257)
T ss_dssp CCGGGEEEEEE
T ss_pred ccceEEEEEEE
Confidence 877 8999983
No 338
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.59 E-value=1.9e-14 Score=112.98 Aligned_cols=131 Identities=14% Similarity=0.067 Sum_probs=93.4
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--E---ecC--------------CCCCeEEEEe--CCEEEEEEcCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--F---PIT--------------SSPDFQIHTF--STKSILIMRQV 196 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~---~~~--------------~~~~~~~~~~--~~~~~l~i~~~ 196 (283)
+....+..|++++|.|.+.+.+ .+.+.|||.. . .+. ...++.+... ....+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 4557889999999999998765 5789999853 1 110 1235555543 34568999999
Q ss_pred CCCCCEEEEEEEEeCCcee---EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CC--CeeEE
Q psy14060 197 FMEDSGVFAVIAENRGGKA---KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KP--LDVYW 270 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~g~~---~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~--~~v~W 270 (283)
..+|+|.|.|.+.+..+.. .....|.|.... ..+|.+...+ ...+..|+.++|.|.+.+. |. +.+.|
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~-~~~~~~g~~v~L~C~~~g~~P~~~~~v~W 159 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSAES------ARNPTIYPLT-LPPALSSDPVIIGCLIHDYFPSGTMNVTW 159 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECSSC------CBCCEEEEEC-CCSSSCCSSEEEEEEEEEEBSCCCEEEEE
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecCCC------CCCCEEEEee-cccccCCCcEEEEEEEEeEECCCcEEEEE
Confidence 9999999999999876531 123466665321 1356665544 3446789999999999987 76 68999
Q ss_pred eeCCEEe
Q psy14060 271 LKVSSLS 277 (283)
Q Consensus 271 ~~~g~~l 277 (283)
+++|..+
T Consensus 160 ~~~~~~~ 166 (220)
T 2fbj_H 160 GKSGKDI 166 (220)
T ss_dssp SCCCSSC
T ss_pred ecCCEec
Confidence 9999765
No 339
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.59 E-value=4.4e-15 Score=119.55 Aligned_cols=140 Identities=14% Similarity=0.198 Sum_probs=84.8
Q ss_pred CeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--Ee---cC--C--C----------CCeEEE--EeCCEEEEE
Q psy14060 134 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FP---IT--S--S----------PDFQIH--TFSTKSILI 192 (283)
Q Consensus 134 p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~---~~--~--~----------~~~~~~--~~~~~~~l~ 192 (283)
|.+...+..+.+.+|++++|.|.+.+.+.+.+.|||.. .. +. . . .+.... ......+|.
T Consensus 3 ~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~ 82 (259)
T 3omz_A 3 SNLEGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMI 82 (259)
T ss_dssp --------CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEE
T ss_pred cccccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEE
Confidence 44555667788999999999999998888999999831 11 00 0 0 011111 112334799
Q ss_pred EcCCCCCCCEEEEEEEEeCCc---eeEEEEEEEEEeccCCC-------CCCCCCCeEEecCCceEEcCCCeEEEEEEEEe
Q psy14060 193 MRQVFMEDSGVFAVIAENRGG---KAKCSANLVVEEKRQGG-------RGGVVPPSFLTTISSAVINVGQLARFDAKISA 262 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~g---~~~~~~~l~v~~~~~~~-------~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g 262 (283)
|.++..+|+|.|+|.+.|..+ .......|.|......+ .....+|.+...+....+.+|++++|.|.+.+
T Consensus 83 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~ 162 (259)
T 3omz_A 83 LRNLIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDKQGSADDAKKDAAKKDGAQKVTQAQSSVSMPVRKAVTLNCLYET 162 (259)
T ss_dssp ESSCCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC------------------CEEECCCCCEEEETTCCEEECCEEEC
T ss_pred ECCCCcccCEEEEEEEeeCCccccEECCCCEEEEecCCCCccccccccccccCCeeeEEeCCEEEEcCCCCEEEEEECCC
Confidence 999999999999999998765 23333566666421000 00001356777777789999999999999887
Q ss_pred e-CCCeeEEeeC
Q psy14060 263 T-KPLDVYWLKV 273 (283)
Q Consensus 263 ~-p~~~v~W~~~ 273 (283)
. |.+.+.|++.
T Consensus 163 ~~~~~~v~W~k~ 174 (259)
T 3omz_A 163 SWWSYYIFWYKR 174 (259)
T ss_dssp CCSSCEEEEEEE
T ss_pred ccCCceEEEeee
Confidence 4 7789999984
No 340
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.59 E-value=1.3e-15 Score=121.28 Aligned_cols=161 Identities=11% Similarity=0.069 Sum_probs=87.8
Q ss_pred eEEEEEEEeccee-eeeeccCCCCCCeEEecCCcee-ecCCCcEEEEEEEeeec----CCEEEEEeCCEecCCCCC--eE
Q psy14060 110 GYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCR-AFEQDQARFEVEFDGDP----LPTIKWFREDFPITSSPD--FQ 181 (283)
Q Consensus 110 G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~-~~~g~~v~l~C~~~g~p----~~~~~W~k~~~~~~~~~~--~~ 181 (283)
|.|.|...+..+. ... .....|+.++..+.... +..|+.+.|.|.+.|.+ ...++|+|+|..+..... ..
T Consensus 1 ~~~~~~~~~~~~~c~~~--~~~~~P~v~i~~ps~~~~l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~ 78 (240)
T 4acp_A 1 GTKSCDKTHTCPPCPAP--ELLGGPSVFLFPPKPKDTLMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPRE 78 (240)
T ss_dssp ------------------------CEEEEECCCHHHHHSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCE
T ss_pred CceeeeeeecCCCCCcc--ccCCCCEEEEECcChHHhcccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccce
Confidence 7899988776542 111 11223444555555555 66799999999999863 348999999998754210 00
Q ss_pred EEEeCC---EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEE
Q psy14060 182 IHTFST---KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDA 258 (283)
Q Consensus 182 ~~~~~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C 258 (283)
....+. .+.|.|......|.|.|+|.+.|..+.......+.... ....+|.+...+.......|+.++|.|
T Consensus 79 ~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~~~~~~i~~~~------~~~~~P~V~v~~~~~~~~~g~~~~L~C 152 (240)
T 4acp_A 79 EQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAPIEKTISKAK------GQPREPQVYTLPPSRDELTKNQVSLTC 152 (240)
T ss_dssp EC---CEEEEEEEECCHHHHHHTCCEEEEEECC----CEEEEECCCC------SCCBCCEEEEECCCGGGGGSSEEEEEE
T ss_pred ECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCccccccccccC------CCCCCCEEEEECCChHHhcCCceEEEE
Confidence 111111 23577766666678999999999876433222322100 001467666654443334589999999
Q ss_pred EEEe-eCCC-eeEEeeCCEEec
Q psy14060 259 KISA-TKPL-DVYWLKVSSLSD 278 (283)
Q Consensus 259 ~~~g-~p~~-~v~W~~~g~~l~ 278 (283)
.+.| +|.+ .+.|++||+.+.
T Consensus 153 ~~~gf~P~~i~v~W~k~g~~~~ 174 (240)
T 4acp_A 153 LVKGFYPSDIAVEWESNGQPEN 174 (240)
T ss_dssp EEEEEBSSCCEEEEEETTEECS
T ss_pred EEeEEeCCCcEEEEEECCEECC
Confidence 9999 4554 799999999874
No 341
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.59 E-value=1.4e-14 Score=116.41 Aligned_cols=137 Identities=15% Similarity=0.225 Sum_probs=94.9
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--Ee---c----------CCCCCeEEE--EeCCEEEEEEcCCC
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FP---I----------TSSPDFQIH--TFSTKSILIMRQVF 197 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~---~----------~~~~~~~~~--~~~~~~~l~i~~~~ 197 (283)
.+...+..+.+.+|++++|.|.+.+.|.+.+.|||.. .. + ....++.+. ......+|.|.++.
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~ 84 (256)
T 3tf7_C 5 SVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVH 84 (256)
T ss_dssp EEECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCC
T ss_pred EEEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCC
Confidence 4455667788999999999999998899999999832 11 0 012234442 22346689999999
Q ss_pred CCCCEEEEEEEEeCCce----eEEEEEEEEEeccC----------CCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee
Q psy14060 198 MEDSGVFAVIAENRGGK----AKCSANLVVEEKRQ----------GGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT 263 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~g~----~~~~~~l~v~~~~~----------~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~ 263 (283)
.+|+|.|+|.+.|..+. ......|.|..... .......+|.+...+....+.+|++++|.|.+.+.
T Consensus 85 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~ 164 (256)
T 3tf7_C 85 RSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPGGGGSGGGGSGGGGSGGGGSEAAVTQSPRNKVTVTGENVTLSCRQTNS 164 (256)
T ss_dssp GGGCSEEEEEEECTTCTTCEEECCCEEEEEEC---------------------CCEEESCSEEEEETTCCEEECEEECSC
T ss_pred cccCEEEEEEEecCCCccceEECCCeEEEEeCCCCCcCCCCcCcccCCCCcCccEEEecCCEEEEeCCCcEEEEEEcCCC
Confidence 99999999999987542 12234566654100 00001135677777888888999999999999886
Q ss_pred CCCeeEEee
Q psy14060 264 KPLDVYWLK 272 (283)
Q Consensus 264 p~~~v~W~~ 272 (283)
.+.+.|++
T Consensus 165 -~~~v~W~k 172 (256)
T 3tf7_C 165 -HNYMYWYR 172 (256)
T ss_dssp -CSEEEEEE
T ss_pred -ceEEEEEE
Confidence 67999998
No 342
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.59 E-value=1.2e-14 Score=113.93 Aligned_cols=132 Identities=13% Similarity=0.135 Sum_probs=94.2
Q ss_pred cCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Ee---c---CC-------------CCCeEEEEe--CCEEEEEE
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FP---I---TS-------------SPDFQIHTF--STKSILIM 193 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~---~---~~-------------~~~~~~~~~--~~~~~l~i 193 (283)
.+....+..|+++.|.|.+.+.+ .+.+.|+|++ .. + .. ..++.+... ....+|.|
T Consensus 6 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 85 (220)
T 1pz5_B 6 ESGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQM 85 (220)
T ss_dssp EECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEE
Confidence 35567889999999999998765 6899999853 11 1 00 235555443 24568999
Q ss_pred cCCCCCCCEEEEEEEEeCCcee-E--EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-ee
Q psy14060 194 RQVFMEDSGVFAVIAENRGGKA-K--CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DV 268 (283)
Q Consensus 194 ~~~~~~d~G~Y~C~a~n~~g~~-~--~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v 268 (283)
.++..+|+|.|.|.+.|..+.. . ....|.|.... ..+|.+...+....+.+|+.++|.|.+.|. |.| .+
T Consensus 86 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 159 (220)
T 1pz5_B 86 NNLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVSSAT------TTAPSVYPLVPGCSDTSGSSVTLGCLVKGYFPEPVTV 159 (220)
T ss_dssp CSCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC------CBCCEEEEECCCSCCSCSSSEEEEEEEEEEBSSCCEE
T ss_pred ccCCHHHCEEEEEEEecCCcccceECCCEEEEEccCC------CCCCeEEEcccccccCCCCcEEEEEEEEEEeCCCeEE
Confidence 9999999999999999875432 1 23566665310 135666554434456789999999999997 888 99
Q ss_pred EEeeCCEE
Q psy14060 269 YWLKVSSL 276 (283)
Q Consensus 269 ~W~~~g~~ 276 (283)
.|+++|..
T Consensus 160 ~W~~~~~~ 167 (220)
T 1pz5_B 160 KWNYGALS 167 (220)
T ss_dssp EEGGGTCC
T ss_pred EEecCCcc
Confidence 99998863
No 343
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.58 E-value=2.2e-14 Score=100.96 Aligned_cols=97 Identities=23% Similarity=0.414 Sum_probs=83.9
Q ss_pred CCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC-CCCeEEEEeC-CEEEEEEcCCCCCCCEEEEE
Q psy14060 129 KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS-SPDFQIHTFS-TKSILIMRQVFMEDSGVFAV 206 (283)
Q Consensus 129 ~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~-~~~~~~~~~~-~~~~l~i~~~~~~d~G~Y~C 206 (283)
....+|.|+..+....+..|+.+.|.|.+.|.|.+.+.|++++..+.. ..++.+.... ...+|.|.++..+|+|.|+|
T Consensus 11 ~~~~~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (116)
T 2kkq_A 11 EHKRAPMFIYKPQSKKVLEGDSVKLECQISAIPPPKLFWKRNNEMVQFNTDRISLYQDNTGRVTLLIKDVNKKDAGWYTV 90 (116)
T ss_dssp CCCBCCCBSSCCCCEEEETTEEEEEEEEBCCBSCCEEEEEETTEECCCCBTTEEEEECTTCEEEEEEEEECGGGCEEEEE
T ss_pred CCCCCCeEEeCCCcEEEeCCCcEEEEEEEeccCCCEEEEEECCEECcCCCCeEEEEeCCCCeEEEEECCCCcccCEEEEE
Confidence 445688888888999999999999999999999999999999998875 4566665544 34589999999999999999
Q ss_pred EEEeCCceeEEEEEEEEEe
Q psy14060 207 IAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 207 ~a~n~~g~~~~~~~l~v~~ 225 (283)
.|.|..|.....+.|.|..
T Consensus 91 ~a~N~~G~~~~~~~l~V~~ 109 (116)
T 2kkq_A 91 SAVNEAGVTTCNTRLDVTA 109 (116)
T ss_dssp EEEETTEEEEEEEEEEEEC
T ss_pred EEEcCCCeEEEEEEEEEeC
Confidence 9999999998889998885
No 344
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.58 E-value=2.1e-14 Score=114.28 Aligned_cols=163 Identities=9% Similarity=0.074 Sum_probs=101.3
Q ss_pred eeeecCcEEEEEEEccCc-c---ce-EEee------------------------------cCCCEEEEE--cCCEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDK-E---IV-RKIT------------------------------ATETTEMEH--KGKIQERVV 101 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~---i~-~~~~------------------------------~~~~~~~~~--~~~~~~L~i 101 (283)
.+.+|++|+|.|.+.+.+ . .. .|.. ...|+.+.. ......|.|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 90 (239)
T 3tv3_H 11 LVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLVFLKL 90 (239)
T ss_dssp EECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEEEEEE
T ss_pred EEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEEEEEE
Confidence 466788999999998654 1 11 1111 123454443 245788999
Q ss_pred ccCCCCCCeEEEEEEEecc----------------eeeeeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeee-cC
Q psy14060 102 DASELDDDGYYAITERKYY----------------ALSDLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL 162 (283)
Q Consensus 102 ~~~~~~D~G~Y~C~a~n~~----------------~~~~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~ 162 (283)
.+++.+|+|.|.|.+.+.. +......+ ....+|.+........+..|+.+.|.|.+.+. |.
T Consensus 91 ~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~l~C~~~~~~p~ 170 (239)
T 3tv3_H 91 NSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 170 (239)
T ss_dssp CSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCCCBCCEEEEECCCCCC--TTEEEEEEEEEEEBSS
T ss_pred CCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCCCcCCEEEEECCChhhccCCcEEEEEEEeeEeCC
Confidence 9999999999999887652 11111112 22345666544444555679999999999884 54
Q ss_pred C-EEEEEeCCEecCCCCCeEEEEeCC----EEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEE
Q psy14060 163 P-TIKWFREDFPITSSPDFQIHTFST----KSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLV 222 (283)
Q Consensus 163 ~-~~~W~k~~~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 222 (283)
+ .+.|++++..+...........+. .+.|.|......| |.|+|.+.|..+.......+.
T Consensus 171 ~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~ 234 (239)
T 3tv3_H 171 PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVE 234 (239)
T ss_dssp CCEEEEGGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECC
T ss_pred CeEEEEEECCccCceEecCceECCCCCEEEEEEEEEchhhcCC-CEEEEEEEECCCCceEEEEec
Confidence 4 589999886432100000011011 2358888888888 999999999887665555544
No 345
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.58 E-value=3.6e-14 Score=111.70 Aligned_cols=133 Identities=13% Similarity=0.061 Sum_probs=92.5
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--E---ecC--------------CCCCeEEEEe--CCEEEEEEcCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--F---PIT--------------SSPDFQIHTF--STKSILIMRQV 196 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~---~~~--------------~~~~~~~~~~--~~~~~l~i~~~ 196 (283)
+....+..|+++.|.|.+.+.+ .+.+.|||+. . .+. ...++.+... ....+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (223)
T 1dee_B 7 SGGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSL 86 (223)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCC
Confidence 3567889999999999998764 4789999853 1 110 1235555543 23568999999
Q ss_pred CCCCCEEEEEEEEeCCc----e--eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-ee
Q psy14060 197 FMEDSGVFAVIAENRGG----K--AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DV 268 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~g----~--~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v 268 (283)
..+|+|.|.|.+.+..+ . ......|.|.... ..+|.+........+..|+.++|.|.+.|. |.| .+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v 160 (223)
T 1dee_B 87 RAEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSSGS------ASAPTLFPLVSCENSNPSSTVAVGCLAQDFLPDSITF 160 (223)
T ss_dssp CGGGCEEEEEEEESSSSTTCCEEEECCCEEEEECSSC------CBCCEEEEEECTTCCCSSSEEEEEEEEEEEBSSCCEE
T ss_pred CHHHCEEEEEEEeccccCcccceeecCcEEEEEccCC------CCCCEEEEecCCcccCCCCcEEEEEEEEEEeCCCeEE
Confidence 99999999999998753 1 1122466665311 124555432222345789999999999987 777 89
Q ss_pred EEee-CCEEec
Q psy14060 269 YWLK-VSSLSD 278 (283)
Q Consensus 269 ~W~~-~g~~l~ 278 (283)
.|++ ||+.+.
T Consensus 161 ~W~~~~g~~l~ 171 (223)
T 1dee_B 161 SWKYKNNSDIS 171 (223)
T ss_dssp EEEETTSCBCS
T ss_pred EeEccCCCccc
Confidence 9999 998764
No 346
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=5.5e-15 Score=104.39 Aligned_cols=111 Identities=20% Similarity=0.278 Sum_probs=87.3
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC-CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS-SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|+|++..+.. ..++.+...+ +|.|.++..+|+|.|+|.+.
T Consensus 6 ~~pP~i~~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g~~~~~~~~~~~~~~~~---~L~i~~v~~~D~G~Y~C~a~ 82 (118)
T 2eo9_A 6 SGPPVIRQGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDGVLVSTQDSRIKQLENG---VLQIRYAKLGDTGRYTCIAS 82 (118)
T ss_dssp CCSCCCSBCCCCEEEETTCEEEEECBCCCSSCCEEEEEESSSBCCTTSTTEEEEETT---EEEEESCCGGGCCCEEEEEE
T ss_pred CCCCEEEcCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECCEECcCCCCeEEEccCC---EEEEccCCcCCCEEEEEEEE
Confidence 3577787778888999999999999999999999999999988864 3455554433 69999999999999999999
Q ss_pred eCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCC
Q psy14060 210 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQ 252 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~ 252 (283)
|..|.....+.|.|... ..|.+...+.+..+.+|.
T Consensus 83 n~~g~~~~~~~l~V~~~--------~~p~~~~~~~~~~~~~G~ 117 (118)
T 2eo9_A 83 TPSGEATWSAYIEVQEF--------GVPVQPPRPTDPNLIPSA 117 (118)
T ss_dssp CSSCEEEEECCEEEECC--------SCCCCCCCCCCCCCCCCC
T ss_pred cCCCcEEEEEEEEEEeC--------CCCccCCCCCCCccCCCC
Confidence 99999888888988864 234444444455555553
No 347
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.58 E-value=1.5e-14 Score=100.70 Aligned_cols=96 Identities=25% Similarity=0.531 Sum_probs=81.9
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC-CCCeEEEEe-CCEEEEEEcCCCCCCCEEEEEEE
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS-SPDFQIHTF-STKSILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~-~~~~~~~~~-~~~~~l~i~~~~~~d~G~Y~C~a 208 (283)
..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+|++..+.. ..++.+... .....|.|.++..+|.|.|+|.+
T Consensus 6 ~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a 85 (110)
T 2dm2_A 6 SGAPFFEMKLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDGKQISPKSDHYTIQRDLDGTCSLHTTASTLDDDGNYTIMA 85 (110)
T ss_dssp SCCCCBSSCCCCEEEETTCCEEEEEEBCCSSCCEEEEECSSCBCCTTCSSEEEEECTTCEEEEEESSCCTTTCSCCEEEE
T ss_pred CCCCEEEecCcCeEEeCCCeEEEEEEEEecCCCEEEEEECCEECCCCCCeEEEEECCCcEEEEEECCCChhhCEEEEEEE
Confidence 4577787778888999999999999999999999999999998875 455666554 34458999999999999999999
Q ss_pred EeCCceeEEEEEEEEEec
Q psy14060 209 ENRGGKAKCSANLVVEEK 226 (283)
Q Consensus 209 ~n~~g~~~~~~~l~v~~~ 226 (283)
.|..|.....+.|.|...
T Consensus 86 ~N~~g~~~~~~~l~V~~~ 103 (110)
T 2dm2_A 86 ANPQGRISCTGRLMVQAV 103 (110)
T ss_dssp ECTTCCEEECCCEEEECC
T ss_pred EECCCeEEEEEEEEEECC
Confidence 999999888888888863
No 348
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.58 E-value=1.8e-14 Score=117.32 Aligned_cols=143 Identities=19% Similarity=0.172 Sum_probs=99.0
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--Ee---c-----------C---CCCCeEEEEe-CCEEEEE
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FP---I-----------T---SSPDFQIHTF-STKSILI 192 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~---~-----------~---~~~~~~~~~~-~~~~~l~ 192 (283)
.+.+...+....+.+|+++.|.|.+.+.+.+.+.|||++ .. + . ...++.+... ....+|.
T Consensus 24 ~~~v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~sL~ 103 (279)
T 2wbj_D 24 GAVVSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHASLTLSTLT 103 (279)
T ss_dssp CCCEEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEECSSSEEEEE
T ss_pred cceEEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeCCCCEEEEE
Confidence 455666677889999999999999988777899999863 11 0 0 1235555442 3466899
Q ss_pred EcCCCCCCCEEEEEEEEeCCc------eeEEEEEEEEEeccCCCCCCCCCCeEEec-CCceEEcCCCeEEEEEEEEeeCC
Q psy14060 193 MRQVFMEDSGVFAVIAENRGG------KAKCSANLVVEEKRQGGRGGVVPPSFLTT-ISSAVINVGQLARFDAKISATKP 265 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~g------~~~~~~~l~v~~~~~~~~~~~~~p~~~~~-~~~~~v~~g~~v~L~C~~~g~p~ 265 (283)
|.++..+|+|.|+|.+.|..+ .......|.|..... ...+|.+... +....+..|+.+.|.|.+.|.++
T Consensus 104 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~~v~L~C~~~g~~P 179 (279)
T 2wbj_D 104 VTSAHPEDSSFYICSARDLTSGANNEQFFGPGTRLTVTEDLK----NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYP 179 (279)
T ss_dssp ESSCCGGGCEEEEEEEEETTCBTSCCEEECCCEEEEEESCGG----GCBCCEEEEEECCHHHHHHHSCCEEEEEEEEEBS
T ss_pred EccCCccCCEEEEEEEcccccCCccceeeCCCEEEEEecCCC----CCCCCEEEEECCCcccccCCCceEEEEEEeeEcC
Confidence 999999999999999999421 111224566664100 0025655443 33334567999999999998743
Q ss_pred --CeeEEeeCCEEecC
Q psy14060 266 --LDVYWLKVSSLSDV 279 (283)
Q Consensus 266 --~~v~W~~~g~~l~~ 279 (283)
+.|.|++||+++..
T Consensus 180 ~~~~v~W~k~g~~l~~ 195 (279)
T 2wbj_D 180 DHVELSWWVNGKEVHS 195 (279)
T ss_dssp SCEEEEEEETTEECCT
T ss_pred CCcEEEEEECCEECCC
Confidence 58999999998754
No 349
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.58 E-value=2.6e-15 Score=119.54 Aligned_cols=140 Identities=11% Similarity=0.045 Sum_probs=91.2
Q ss_pred CeEEecCCcee-ecCCCcEEEEEEEeee---cCC-EEEEEeCCEecCCCCC-eEEEEe----CCEEEEEEcCCCCCCCEE
Q psy14060 134 PVFTKKIQPCR-AFEQDQARFEVEFDGD---PLP-TIKWFREDFPITSSPD-FQIHTF----STKSILIMRQVFMEDSGV 203 (283)
Q Consensus 134 p~~~~~~~~~~-~~~g~~v~l~C~~~g~---p~~-~~~W~k~~~~~~~~~~-~~~~~~----~~~~~l~i~~~~~~d~G~ 203 (283)
..++..+.... +..|+.++|.|.+.+. |.+ .+.|+|++..+..... ...... .....|.|.++..+|.|.
T Consensus 17 ~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~ 96 (239)
T 1i1c_A 17 SVFIFPPKTKDVLGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKT 96 (239)
T ss_dssp CEEEECCCHHHHTTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred EEEEECCChHHhcccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCe
Confidence 33444444333 7899999999999987 766 8999999866542110 000000 012469999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CC-CeeEEeeCCEEecC
Q psy14060 204 FAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KP-LDVYWLKVSSLSDV 279 (283)
Q Consensus 204 Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~-~~v~W~~~g~~l~~ 279 (283)
|+|.+.|..+.......+.... ....+|.+...+.......|+.+.|.|.+.|. |. ..|.|++||+.+..
T Consensus 97 Y~C~~~~~~~~~~~~~~v~~~~------~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 168 (239)
T 1i1c_A 97 FKCKVNSGAFPAPIEKSISKPE------GTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQEN 168 (239)
T ss_dssp EEEEEECSSSSSCEEEEECCCS------SCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSS
T ss_pred EEEEEecccCCCCcEEEEecCC------CCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCC
Confidence 9999999887542222221100 00146766554443323458899999999985 44 37999999998753
No 350
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.58 E-value=2.6e-14 Score=114.84 Aligned_cols=135 Identities=16% Similarity=0.190 Sum_probs=93.9
Q ss_pred cCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Ee---c--------------CCCCCeEEEEe--CCEEEEEEcC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FP---I--------------TSSPDFQIHTF--STKSILIMRQ 195 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~---~--------------~~~~~~~~~~~--~~~~~l~i~~ 195 (283)
.+....+.+|++++|.|.+.+.+ .+.+.|||.. .. + ....++.+... ....+|.|.+
T Consensus 8 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 87 (256)
T 3umt_A 8 QSGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRS 87 (256)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred ccCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECC
Confidence 34456789999999999998865 6889999742 11 1 01234555433 3456799999
Q ss_pred CCCCCCEEEEEEEEeC----CceeEEEEEEEEEeccC------CCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCC
Q psy14060 196 VFMEDSGVFAVIAENR----GGKAKCSANLVVEEKRQ------GGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP 265 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~----~g~~~~~~~l~v~~~~~------~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~ 265 (283)
+..+|+|.|+|.+.|. .+.......|.|..... .......+|.+...+....+.+|++++|.|.+.+.|.
T Consensus 88 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~v~~G~~v~L~C~~~~~~~ 167 (256)
T 3umt_A 88 LTSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSSGGGGSGGGGSGGGGSTDIQLTQSPSSLSASLGERVSITCRASQDIG 167 (256)
T ss_dssp CCGGGCEEEEEEECCSTTCCSCEECCCEEEEECC---------------CCCCEEEECSEEEECTTCCEEEEEEESSCCT
T ss_pred CCcccCEEEEEEEccCCCccccEECCCEEEEEcCCCccccCcccCCCCccccEEEcCCCeEEEECCCCEEEEEEEecCCC
Confidence 9999999999999987 23333345666653100 0000012567777777789999999999999999888
Q ss_pred CeeEEeeC
Q psy14060 266 LDVYWLKV 273 (283)
Q Consensus 266 ~~v~W~~~ 273 (283)
+.+.|+++
T Consensus 168 ~~v~W~k~ 175 (256)
T 3umt_A 168 SNLNWLQQ 175 (256)
T ss_dssp TCEEEEEE
T ss_pred cEEEEEEE
Confidence 89999984
No 351
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.58 E-value=9.7e-14 Score=109.83 Aligned_cols=164 Identities=7% Similarity=0.022 Sum_probs=99.3
Q ss_pred eeeecCcEEEEEEEccCc----cc--e--E--------Ee-----e-----------cCCCEEEEEc--CCEEEEEEccC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EI--V--R--------KI-----T-----------ATETTEMEHK--GKIQERVVDAS 104 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i--~--~--------~~-----~-----------~~~~~~~~~~--~~~~~L~i~~~ 104 (283)
.+.+|++|+|.|.+.+.+ .+ . + .+ . ...|+.+... .+..+|.|.++
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 90 (232)
T 3qhz_H 11 LVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLTMTNM 90 (232)
T ss_dssp EECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred EECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEEECcC
Confidence 467788999999997632 23 2 1 11 0 0135555432 36788999999
Q ss_pred CCCCCeEEEEEEEecc-----------eeeeeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeeecC--CEEEEEe
Q psy14060 105 ELDDDGYYAITERKYY-----------ALSDLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPL--PTIKWFR 169 (283)
Q Consensus 105 ~~~D~G~Y~C~a~n~~-----------~~~~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~--~~~~W~k 169 (283)
+.+|+|.|.|.+.+.. +......+ ....+|.+........+..|+.+.|.|.+.+.++ ..+.|++
T Consensus 91 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W~~ 170 (232)
T 3qhz_H 91 DPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSWNS 170 (232)
T ss_dssp CGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSCCBCCEEEEECC-------CEEEEEEEEEEEBSSCCEEEEGG
T ss_pred ChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCCCCCCEEEEecccccccCCCcEEEEEEEeeEeCCCeEEEEEE
Confidence 9999999999998652 11111112 2234566654444445667999999999988543 4688999
Q ss_pred CCEecCCCCCeEEEE-eC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEE
Q psy14060 170 EDFPITSSPDFQIHT-FS---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223 (283)
Q Consensus 170 ~~~~~~~~~~~~~~~-~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v 223 (283)
++..+.......... .+ ..+.|.|......| |.|+|.+.|..+.......+.+
T Consensus 171 ~g~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-g~ytC~v~~~~~~~~~~~~l~~ 227 (232)
T 3qhz_H 171 GALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEP 227 (232)
T ss_dssp GTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECCC
T ss_pred CCEecceeeccceeCCCCCEEEEEEEEEchhhcCC-CEEEEEEEeCCCCccEEEEeCC
Confidence 886432100000000 01 12358888888888 9999999998877666555543
No 352
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=1.4e-14 Score=98.79 Aligned_cols=93 Identities=25% Similarity=0.470 Sum_probs=78.3
Q ss_pred cCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEE
Q psy14060 128 QKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVI 207 (283)
Q Consensus 128 ~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 207 (283)
..+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|++++..+..... ........|.|.++..+|+|.|+|.
T Consensus 6 ~~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~---~~~~~~~~L~i~~v~~~D~G~Y~C~ 82 (99)
T 2yr3_A 6 SGMEVAPSFSSVLKDCAVIEGQDFVLQCSVRGTPVPRITWLLNGQPIQYARS---TCEAGVAELHIQDALPEDHGTYTCL 82 (99)
T ss_dssp SCCCEEEEEEECCCCEEECTTCCEEEECEEEEESCCCCEEEESSSBCSSCCC---EEETTEEEEEECSCCTTCCBCEEEE
T ss_pred CCcccCCceeecCCCCEEeCCCeEEEEEEEeeeCCCeEEEEECCEECcccce---EeeCCeEEEEECCCChhhCEEEEEE
Confidence 3455688888888889999999999999999999999999999988765432 2234567899999999999999999
Q ss_pred EEeCCceeEEEEEEEE
Q psy14060 208 AENRGGKAKCSANLVV 223 (283)
Q Consensus 208 a~n~~g~~~~~~~l~v 223 (283)
+.|..|.....+.|.|
T Consensus 83 a~N~~g~~~~~~~l~V 98 (99)
T 2yr3_A 83 AENALGQVSCSAWVTV 98 (99)
T ss_dssp EECSSCEEEEECCEEE
T ss_pred EEECCCeEEEEEEEEE
Confidence 9999999877777665
No 353
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.58 E-value=1.5e-14 Score=116.09 Aligned_cols=137 Identities=15% Similarity=0.132 Sum_probs=94.8
Q ss_pred EecCCceeecCCCcEEEEEEEeeec--CCEEEEEeC--CEe---c--------------CCCCCeEEEEeC--CEEEEEE
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRE--DFP---I--------------TSSPDFQIHTFS--TKSILIM 193 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~--~~~---~--------------~~~~~~~~~~~~--~~~~l~i 193 (283)
+..+....+.+|++++|.|.+.+.+ .+.+.|||. +.. + ....++.+.... ...+|.|
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I 84 (253)
T 3uzq_A 5 LEQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHL 84 (253)
T ss_dssp EEECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEE
T ss_pred EecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEe
Confidence 4456678899999999999998843 679999982 111 0 012355554432 3567999
Q ss_pred cCCCCCCCEEEEEEEEeCCcee-EEEEEEEEEeccCCC-----CCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC-
Q psy14060 194 RQVFMEDSGVFAVIAENRGGKA-KCSANLVVEEKRQGG-----RGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL- 266 (283)
Q Consensus 194 ~~~~~~d~G~Y~C~a~n~~g~~-~~~~~l~v~~~~~~~-----~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~- 266 (283)
.++..+|+|.|+|.+.|..+.. .....|.|....... .....+|.+...+....+.+|++++|.|.+.+.|.+
T Consensus 85 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~ 164 (253)
T 3uzq_A 85 SSLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSAGGGGSGGGGSGGGGSELVMTQTPASLAVSLGQRATISCRASENVDRY 164 (253)
T ss_dssp CSCCGGGCEEEEEEECSSSCCEECCCEEEEECSSSCCCCC---------CCEEEECSEEEECTTSCEEEEEEESSCCEET
T ss_pred CCCCcccCEEEEEEEeeCCccEECCCcEEEEecCCccccccccCCCcccceEECcCCeEEEeCCCCEEEEEEecCccccC
Confidence 9999999999999999865443 234556665310000 000125677777777899999999999999988776
Q ss_pred ---eeEEeeC
Q psy14060 267 ---DVYWLKV 273 (283)
Q Consensus 267 ---~v~W~~~ 273 (283)
.+.|+++
T Consensus 165 ~~~~v~W~r~ 174 (253)
T 3uzq_A 165 GNSFMHWYQQ 174 (253)
T ss_dssp TEECEEEEEE
T ss_pred CCcEEEEEEE
Confidence 8999984
No 354
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.58 E-value=1.4e-14 Score=114.33 Aligned_cols=132 Identities=13% Similarity=0.141 Sum_probs=90.1
Q ss_pred CCceeecCCCcEEEEEEEeeecC----CEEEEEeCC--Eec----C------------CCCCeEEEEe--CCEEEEEEcC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDPL----PTIKWFRED--FPI----T------------SSPDFQIHTF--STKSILIMRQ 195 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p~----~~~~W~k~~--~~~----~------------~~~~~~~~~~--~~~~~l~i~~ 195 (283)
+....+..|++++|.|.+.+.|. +.+.|||+. ..+ . ...++.+... .....|.|.+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 45678899999999999988664 899999852 211 0 0134555443 2357899999
Q ss_pred CCCCCCEEEEEEEEeCCc------e---eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CC
Q psy14060 196 VFMEDSGVFAVIAENRGG------K---AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KP 265 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~g------~---~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~ 265 (283)
+..+|+|.|.|.+.|..| . ......|.|.... ..+|.+........+..|+.+.|.|.+.|. |.
T Consensus 87 v~~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~~~~L~V~~~~------~~~P~i~~~~~~~~~~~g~~~~l~C~~~g~~P~ 160 (228)
T 3bae_H 87 VDTADTATYYCARRGFYGRKYEVNHFDYWGQGTTLTVSSAK------TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPE 160 (228)
T ss_dssp CCGGGCEEEEEEEEEESTTCTTSEEEEEECCCEEEEECSCC------CBCCEEEEECC-----CCSEEEEEEEEEEEBSS
T ss_pred CCcccCEEEEEEEecCCCccccccceeeeCCcEEEEecCCC------CCCCEEEEecccccccCCCCEEEEEEEccEeCC
Confidence 999999999999998764 1 1122566665310 135665544433446789999999999986 77
Q ss_pred C-eeEEeeCCEEe
Q psy14060 266 L-DVYWLKVSSLS 277 (283)
Q Consensus 266 ~-~v~W~~~g~~l 277 (283)
| .+.|+++|..+
T Consensus 161 p~~v~W~~~~~~~ 173 (228)
T 3bae_H 161 PVTLTWNSGSLSS 173 (228)
T ss_dssp CCEEEEGGGTCCT
T ss_pred CEEEEEeeCCccc
Confidence 7 99999998753
No 355
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.58 E-value=1.3e-14 Score=116.70 Aligned_cols=136 Identities=8% Similarity=0.026 Sum_probs=95.1
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCe-EEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDF-QIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
.+|.+...+. ..+..|++++|.|.+.+ +.+.+.|||++..+...... ..........|.|.+++.+|+|.|+|.+.|
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~~ 83 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTLHLIGEHHDGVSKANFSIGPMMQDLAGTYRCYGSV 83 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEEEEECBCCTTCEEEEEEECSCCTTTCEEEEEEEEC
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcceeeeeccCCCceEEEEeecCCcccCEEEEEeEec
Confidence 4666665554 67889999999999975 57899999998654210000 000011245799999999999999999986
Q ss_pred CCc-----eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEec
Q psy14060 211 RGG-----KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 211 ~~g-----~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~ 278 (283)
... ..+..+.|.|.... .+|.+...+. ..+.+|++++|.|.+.+. .+.|.|+|||+.+.
T Consensus 84 ~~~~~~~s~~S~~~~L~V~~~~-------~~P~l~~~p~-~~V~~G~~vtL~C~~~~~-~~~~~w~k~g~~~~ 147 (257)
T 1b6u_A 84 THSPYQLSAPSDPLDIVITGLY-------EKPSLSAQPG-PTVLAGESVTLSCSSRSS-YDMYHLSREGEAHE 147 (257)
T ss_dssp SSCTTSCCCCCCCEEEEEECSS-------CCCEEECSSC-TTCBTTCEEEEEEECSSC-CSEEEEEETTSSCE
T ss_pred cCCCccccccCCCEEEecccCC-------CCcceEccCC-CccCCCCEEEEEEeCCCC-CcEEEEEECCcccC
Confidence 431 22344677776531 3566665544 467899999999999875 47899999997664
No 356
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.57 E-value=1.9e-14 Score=112.22 Aligned_cols=130 Identities=17% Similarity=0.227 Sum_probs=90.7
Q ss_pred ecCCceeecCCCcEEEEEEEeee-------cCCEEEEEeCCEe------cC-----------CCCCeEEEEe--CCEEEE
Q psy14060 138 KKIQPCRAFEQDQARFEVEFDGD-------PLPTIKWFREDFP------IT-----------SSPDFQIHTF--STKSIL 191 (283)
Q Consensus 138 ~~~~~~~~~~g~~v~l~C~~~g~-------p~~~~~W~k~~~~------~~-----------~~~~~~~~~~--~~~~~l 191 (283)
..+....+..|+.+.|.|.+.+. +.+.+.|+|++.. +. ...++.+... ....+|
T Consensus 5 ~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL 84 (214)
T 2zg1_A 5 QVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCSL 84 (214)
T ss_dssp ECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCCE
T ss_pred eCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEEE
Confidence 34566788999999999998753 4678999998652 10 1123333221 123469
Q ss_pred EEcCCCCCCCEEEEEEEEeCCceeE----EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee----
Q psy14060 192 IMRQVFMEDSGVFAVIAENRGGKAK----CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT---- 263 (283)
Q Consensus 192 ~i~~~~~~d~G~Y~C~a~n~~g~~~----~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~---- 263 (283)
.|.++..+|+|.|.|.+.+..+... ....|.|.... .+|.+.. +. .+.+|+.++|.|.+.+.
T Consensus 85 ~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~-------~~p~i~~-~~--~~~~G~~v~L~C~~~~~~~~~ 154 (214)
T 2zg1_A 85 SIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTALI-------EKPDIHF-LE--PLESGRPTRLSCSLPGSCEAG 154 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEECCC-------CCCEEC---C--CCCTTCCEEEEEECTTCCSCS
T ss_pred EEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEecCC-------CCCceec-Cc--cccCCCeEEEEEEeccCCCCC
Confidence 9999999999999999998864332 24667776531 2455543 22 26799999999999764
Q ss_pred CCCeeEEeeCCEEe
Q psy14060 264 KPLDVYWLKVSSLS 277 (283)
Q Consensus 264 p~~~v~W~~~g~~l 277 (283)
|.|.+.|+++|..+
T Consensus 155 p~p~v~W~~~~~~~ 168 (214)
T 2zg1_A 155 PPLTFSWTGNALSP 168 (214)
T ss_dssp SCCEEEEESSTTSS
T ss_pred CCceEEEeCCCCcc
Confidence 78899999998653
No 357
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.57 E-value=4.8e-14 Score=113.89 Aligned_cols=141 Identities=15% Similarity=0.135 Sum_probs=95.8
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeec------CCEEEEEeCC--Eec---C---------CCCCeEEEEeCCEEEEE
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDP------LPTIKWFRED--FPI---T---------SSPDFQIHTFSTKSILI 192 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p------~~~~~W~k~~--~~~---~---------~~~~~~~~~~~~~~~l~ 192 (283)
.+.+...+..+.+.+|++++|.|.+.+.+ .+.+.|||+. ..+ . ...++.+........|.
T Consensus 5 ~~~v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~ 84 (264)
T 2gjj_A 5 DIVLTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSGSGTDFTLT 84 (264)
T ss_dssp CCCEEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEE
T ss_pred ccceEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEecCCCEEEEE
Confidence 34566667778999999999999998876 5789999852 211 0 13466665556677899
Q ss_pred EcCCCCCCCEEEEEEEEeCCce-eEEEEEEEEEeccCC--------CCCCC-CCCeEEecCCceEEcCCCeEEEEEEEEe
Q psy14060 193 MRQVFMEDSGVFAVIAENRGGK-AKCSANLVVEEKRQG--------GRGGV-VPPSFLTTISSAVINVGQLARFDAKISA 262 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~--------~~~~~-~~p~~~~~~~~~~v~~g~~v~L~C~~~g 262 (283)
|.++..+|+|.|.|.+.|..+. ......|.|...... ..... .++..+..+....+.+|++++|.|.+.+
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~G~~v~L~C~~~~ 164 (264)
T 2gjj_A 85 IGSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKRGGGGSGGGGSGGGGSGGGGSEVQLQQSGPEVVKTGASVKISCKASG 164 (264)
T ss_dssp ESSCCGGGCEEEEEEECSSSSCEECCCEEEEEECC-------------------CCEEEECCCEEECTTCCEEEEEEEES
T ss_pred ECCCCHHHCEEEEEEEecCCccEecCCEEEEEEcCCcccccccccccccccccCcEEEeCCCCEEEcCCCcEEEEEEEeC
Confidence 9999999999999999987543 222356777642100 00000 0112222334457899999999999998
Q ss_pred eCC--CeeEEeeC
Q psy14060 263 TKP--LDVYWLKV 273 (283)
Q Consensus 263 ~p~--~~v~W~~~ 273 (283)
.+. +.+.|+++
T Consensus 165 ~~~~~~~v~W~r~ 177 (264)
T 2gjj_A 165 YSFTGYFINWVKK 177 (264)
T ss_dssp SCGGGSEEEEEEE
T ss_pred CccCCeEEEEEEE
Confidence 764 78999996
No 358
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.57 E-value=1.1e-14 Score=97.68 Aligned_cols=86 Identities=13% Similarity=0.226 Sum_probs=69.9
Q ss_pred CCCeEEecCCce--eecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 132 KPPVFTKKIQPC--RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 132 ~~p~~~~~~~~~--~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
.|+.+..+..+. .+..|+.+.|.|.+.+ |.+.+.|+|+|..+..+.++.+...+..+.|.|.++..+|+|.|+|.|.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~ 81 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAG 81 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECS
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEc
Confidence 355555555554 4568999999999976 8899999999999998888899888888999999999999999999985
Q ss_pred eCCceeEEEEEEE
Q psy14060 210 NRGGKAKCSANLV 222 (283)
Q Consensus 210 n~~g~~~~~~~l~ 222 (283)
|. ..++.|.
T Consensus 82 n~----~~~~~lt 90 (91)
T 2lvc_A 82 DE----CAYFTVT 90 (91)
T ss_dssp SC----EEEEEEE
T ss_pred ce----EEEEEEE
Confidence 54 4445544
No 359
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.57 E-value=2.7e-13 Score=105.83 Aligned_cols=132 Identities=23% Similarity=0.254 Sum_probs=100.6
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCC--CCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS--PDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
.+|.+ ..+....+..|+.+.|.|.+.|.|.|.+.|+|++..+... .++.+........|.|.++..+|.|.|+|.|.
T Consensus 18 ~~P~~-~~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~ 96 (215)
T 3mtr_A 18 YAPKL-QGPVAVYTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAV 96 (215)
T ss_dssp EEEEE-ECCSEEEECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEE
T ss_pred cCCcc-cCCceEEEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEE
Confidence 35666 4666788999999999999999999999999999998765 45677666677899999999999999999999
Q ss_pred eCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEE----eeCCC--eeEEeeCCEE
Q psy14060 210 NRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKIS----ATKPL--DVYWLKVSSL 276 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~----g~p~~--~v~W~~~g~~ 276 (283)
|..|.....+.+.|.... .+|.... ....+..+.|.|... +.|.. .+.|.+++..
T Consensus 97 n~~g~~~~~~~l~v~~~P-------~~p~~~~-----~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~ 157 (215)
T 3mtr_A 97 NRIGQESLEFILVQADTP-------SSPSIDQ-----VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEE 157 (215)
T ss_dssp CSSCEEEEEEEEEECCCC-------CCCEEEE-----EEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCC
T ss_pred ECCCceEEEEEEEECCCC-------CCCcceE-----EEEecceEEEEEecCCccCCCceEEEEEEEEECCCC
Confidence 999998888888876531 2333221 123567788888742 22322 4778887753
No 360
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.57 E-value=2.3e-14 Score=112.00 Aligned_cols=133 Identities=13% Similarity=0.068 Sum_probs=91.0
Q ss_pred cCCceeecCCCcEEEEEEEeee--cCCEEEEEeCC--E---ec-------------CCCCCeEEEEeCCEEEEEEcCCCC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGD--PLPTIKWFRED--F---PI-------------TSSPDFQIHTFSTKSILIMRQVFM 198 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~--~---~~-------------~~~~~~~~~~~~~~~~l~i~~~~~ 198 (283)
.+....+.+|++++|.|.+.+. +.+.+.|||.. . .+ ....++.+.......+|.|.++..
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~ 84 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISKTSTTVDLKITSPTT 84 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEECSSEEEEEESSCCG
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEeeCCEEEEEECCCCc
Confidence 4556788999999999999863 35789999742 1 11 012456665556677899999999
Q ss_pred CCCEEEEEEEEeCCce----eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC--eeEEee
Q psy14060 199 EDSGVFAVIAENRGGK----AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL--DVYWLK 272 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g~----~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~--~v~W~~ 272 (283)
+|+|.|+|.+.+..+. ......|.|.... ..+|.+...+....+..|+.++|.|.+.+.+++ .+.|++
T Consensus 85 ~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~~~~~~g~~v~l~C~~~~~~p~~~~v~W~~ 158 (215)
T 3nl4_H 85 EDTATYFCVRKYGSEWGGDLWGPGTLVTVSSGQ------PKAPSVFPLAPCCGDTPSSTVTLGCLVKGYLPEPVTVTWNS 158 (215)
T ss_dssp GGCEEEEEEEECSSSSCEEEECCCEEEEECSSC------CBCCEEEEECCCTTCCC--CEEEEEEEEEEBSSCCEEEEGG
T ss_pred ccCEEEEEEEecCCCccceEEcCCEEEEEeCCC------cCCCEEEEecCCccccCCCcEEEEEEEeeeeCCCeEEEEee
Confidence 9999999999987542 2223456665211 135666544444456689999999999997544 577999
Q ss_pred CCEEe
Q psy14060 273 VSSLS 277 (283)
Q Consensus 273 ~g~~l 277 (283)
+|..+
T Consensus 159 ~g~~~ 163 (215)
T 3nl4_H 159 GTLTN 163 (215)
T ss_dssp GTBCT
T ss_pred CCEEC
Confidence 99744
No 361
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.57 E-value=1.5e-14 Score=104.86 Aligned_cols=85 Identities=22% Similarity=0.380 Sum_probs=72.9
Q ss_pred CCceeecCCCcEEEEEEEeeecCCEEEEEeCC----------------------------Eec-CCCCCeEEEEeCCEEE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDPLPTIKWFRED----------------------------FPI-TSSPDFQIHTFSTKSI 190 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~----------------------------~~~-~~~~~~~~~~~~~~~~ 190 (283)
+..+.+..|+.+.|.|.+.|.|.|.++|+|++ ..+ ....++.+...+..+.
T Consensus 25 p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~~~~~s~ 104 (139)
T 1gxe_A 25 PDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVETTKDRSI 104 (139)
T ss_dssp CCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEEETTEEE
T ss_pred CCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEeCCCEEE
Confidence 46678999999999999999999999999998 444 2345667777777788
Q ss_pred EEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 191 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 191 l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
|.|.++..+|+|.|+|.|.|..|.....+.|.|.
T Consensus 105 L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~ 138 (139)
T 1gxe_A 105 FTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVI 138 (139)
T ss_dssp EECSCCCTTTCEEEEEEEECSSCEEEEEEEEEEC
T ss_pred EEECCCCcccCEEEEEEEEeCCceEEEEEEEEEE
Confidence 9999999999999999999999998888887764
No 362
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.57 E-value=5.3e-15 Score=117.14 Aligned_cols=140 Identities=11% Similarity=0.119 Sum_probs=90.8
Q ss_pred CCeE-EecCCceeecCCCcEEEEEEEeee-cC-C-EEEEEeCCEec-CCCCCeEEEEe-C---CEEEEEEcCCCCCCCEE
Q psy14060 133 PPVF-TKKIQPCRAFEQDQARFEVEFDGD-PL-P-TIKWFREDFPI-TSSPDFQIHTF-S---TKSILIMRQVFMEDSGV 203 (283)
Q Consensus 133 ~p~~-~~~~~~~~~~~g~~v~l~C~~~g~-p~-~-~~~W~k~~~~~-~~~~~~~~~~~-~---~~~~l~i~~~~~~d~G~ 203 (283)
+|.+ +..+....+..|+.++|.|.+.|. |. | .+.|+++|..+ ........... + ....|.|.++..+|.|.
T Consensus 12 ~P~v~~~~p~~~~v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~ 91 (231)
T 2w59_A 12 PIQLYAIPPSPGELYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGER 91 (231)
T ss_dssp CCEEEEECCCHHHHHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCC
T ss_pred CCEEEEeCcChhhcccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCE
Confidence 4444 345566677899999999999985 64 5 99999998876 32221111111 1 12469999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecC-CceEEcCCCeEEEEEEEEee-C-CCeeEEeeCCEEecC
Q psy14060 204 FAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI-SSAVINVGQLARFDAKISAT-K-PLDVYWLKVSSLSDV 279 (283)
Q Consensus 204 Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~-~~~~v~~g~~v~L~C~~~g~-p-~~~v~W~~~g~~l~~ 279 (283)
|+|.+.|..+.......+.+.. ....+|.+.... .... ..|..+.|.|.+.|. | .+.|.|++||+.+..
T Consensus 92 Y~C~~~~~~~~~~~~~~v~~~~------~~~~~P~v~v~~~~~~~-~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 163 (231)
T 2w59_A 92 FTCTVQHEELPLPLSKSVYRNT------GPTTPPLIYPFAPHPEE-LSLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPA 163 (231)
T ss_dssp EEEEEECTTCSSCEEEEECCCC------SCCBCCEEEEECCCGGG-GGSSEEEEEEEEEEEBSSCCEEEEEETTEECCG
T ss_pred EEEEEEcCCCCCceEEEEecCC------CCCcCCEEEEeCCCHHH-hccCceEEEEEEEeccCCCcEEEEEECCEECCC
Confidence 9999999876533333322110 001355554332 2222 235679999999996 4 368999999998854
No 363
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.56 E-value=9.3e-15 Score=96.44 Aligned_cols=81 Identities=17% Similarity=0.300 Sum_probs=69.8
Q ss_pred CCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 219 (283)
+..+.+.+|+.+.|.|.+.+ |.|.+.|||+|..+....++.+...+..+.|.|.++..+|+|.|+|.|.| ....+
T Consensus 3 lt~v~~~~G~~v~l~C~vs~-p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n----~~~~a 77 (84)
T 2lu7_A 3 MTRVRSTPGGDLELVVHLSG-PGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQ----DSRIF 77 (84)
T ss_dssp CCCEEECTTSCEEEECCCSC-CSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTT----TCEEE
T ss_pred CeEEEEecCCCEEEEEEECC-CCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECC----EEEEE
Confidence 45678899999999999977 88999999999999988888888888888999999999999999999844 45566
Q ss_pred EEEEEe
Q psy14060 220 NLVVEE 225 (283)
Q Consensus 220 ~l~v~~ 225 (283)
.|.|.+
T Consensus 78 ~l~V~e 83 (84)
T 2lu7_A 78 LVSVEE 83 (84)
T ss_dssp EEEECC
T ss_pred EEEEEC
Confidence 777653
No 364
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.56 E-value=4e-14 Score=113.65 Aligned_cols=133 Identities=9% Similarity=0.102 Sum_probs=90.4
Q ss_pred CCceeecCCCcEEEEEEEeee--cCCEEEEEeCC--Eec------------CCCCCeEEEEeCCEEEEEEcCCCCCCCEE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGD--PLPTIKWFRED--FPI------------TSSPDFQIHTFSTKSILIMRQVFMEDSGV 203 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~--~~~------------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~ 203 (283)
+....+.+|++++|.|.+.+. +.+.+.|||+. ... ....++.+...+...+|.|.++..+|+|.
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~DsG~ 88 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSKSGTSASLAITGLQSEDEAD 88 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEEETTEEEEEECSCCGGGCEE
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEccCCEEEEEECCCChhhCEE
Confidence 345778999999999999886 67899999842 111 01246666666667789999999999999
Q ss_pred EEEEEEeCCce---eEEEEEEEEEeccCCCC----------CC-CCCCeEEecCCceEEcCCCeEEEEEEEEeeC--CCe
Q psy14060 204 FAVIAENRGGK---AKCSANLVVEEKRQGGR----------GG-VVPPSFLTTISSAVINVGQLARFDAKISATK--PLD 267 (283)
Q Consensus 204 Y~C~a~n~~g~---~~~~~~l~v~~~~~~~~----------~~-~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p--~~~ 267 (283)
|+|.+.|..+. ......|.|........ .. ..++.+. .+....+.+|++++|.|.+.+.+ .+.
T Consensus 89 Y~C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~G~~v~L~C~~~~~~~~~~~ 167 (256)
T 3ux9_B 89 YYCQVRDNNENEWVFGGGTKLTVLGSGGSTITSYNVYYTKLSSSGSEVQLV-ESGGGLVQPGGSLRLSCAASGFTFSSYA 167 (256)
T ss_dssp EEEEEEETTTTEEEECCCEEEEEC----------------------CCEEE-EECCEEECTTCCEEEEEEEESSCGGGSE
T ss_pred EEEEEEECCCCceEECCCEEEEEECCCCCcCccceeEEeecCCCccceeEE-cCCCeEEcCCCeEEEEEEEeCCcccccE
Confidence 99999987542 22235566654210000 00 0011333 33455689999999999999876 678
Q ss_pred eEEeeC
Q psy14060 268 VYWLKV 273 (283)
Q Consensus 268 v~W~~~ 273 (283)
+.|+++
T Consensus 168 v~W~r~ 173 (256)
T 3ux9_B 168 MSWVRQ 173 (256)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999986
No 365
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.56 E-value=7.5e-15 Score=111.80 Aligned_cols=119 Identities=11% Similarity=0.159 Sum_probs=87.2
Q ss_pred CceeecCCCcEEEEEEEe--eecCCEEEEEe--CCEec----------CCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEE
Q psy14060 141 QPCRAFEQDQARFEVEFD--GDPLPTIKWFR--EDFPI----------TSSPDFQIHTFSTKSILIMRQVFMEDSGVFAV 206 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~--g~p~~~~~W~k--~~~~~----------~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 206 (283)
.......|+++.|.|... +.+.+.+.|++ ++..+ ....++.+... .+|.|.++..+|+|.|.|
T Consensus 7 ~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~~n---gsL~I~~v~~~DsG~Y~c 83 (182)
T 1hnf_A 7 LETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLFKN---GTLKIKHLKTDDQDIYKV 83 (182)
T ss_dssp EEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEECTT---SCEEECSCCGGGCEEEEE
T ss_pred cEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEECCC---CCEEECCCChhhCEEEEE
Confidence 345678899999999542 23467899999 87765 23345554422 269999999999999999
Q ss_pred EEEeCCceeE--EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEe
Q psy14060 207 IAENRGGKAK--CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLS 277 (283)
Q Consensus 207 ~a~n~~g~~~--~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l 277 (283)
.+.|..|... ..+.|.|.+.. .+|.+.. .+..+.|.|.+.+.|.+.|.|++||+.+
T Consensus 84 ~~~n~~g~~~~~~~~~L~V~~~~-------~~P~i~~--------~~~~v~L~C~~~~~p~~~~~W~~~g~~l 141 (182)
T 1hnf_A 84 SIYDTKGKNVLEKIFDLKIQERV-------SKPKISW--------TCINTTLTCEVMNGTDPELNLYQDGKHL 141 (182)
T ss_dssp EEEETTSCEEEEEEEEEEEECCC-------CCCEEEE--------ETTTTEEEEECSSCSSCEEEEEESSCEE
T ss_pred EEEeCCCceeEEEEEEEEEcCcC-------CCCEEEE--------ccCcEEEEeEccCCCCCEEEEEECCEEC
Confidence 9999887754 34567776421 2444433 2336899999999898999999999887
No 366
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.56 E-value=1.5e-15 Score=115.81 Aligned_cols=118 Identities=12% Similarity=0.072 Sum_probs=86.1
Q ss_pred ceeecCCCcEEEEEEEeeecCCEEEEEeCCEe--cCC------------CCCeEEEE---eCCEEEEEEcCCCCCCCEEE
Q psy14060 142 PCRAFEQDQARFEVEFDGDPLPTIKWFREDFP--ITS------------SPDFQIHT---FSTKSILIMRQVFMEDSGVF 204 (283)
Q Consensus 142 ~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~--~~~------------~~~~~~~~---~~~~~~l~i~~~~~~d~G~Y 204 (283)
.+.+..|+++.|.|.+.+.|.+.+.|++++.. +.. ..++.+.. .....+|.|.++..+|+|.|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~Y 83 (184)
T 2ny1_B 4 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 83 (184)
T ss_dssp EEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEEE
T ss_pred cEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEEE
Confidence 35688999999999999888899999998752 210 11111111 11244699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEe
Q psy14060 205 AVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLS 277 (283)
Q Consensus 205 ~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l 277 (283)
+|.+.|..+ .+.|.|... . .+....+.+|+.+.|.|.+.+.|.|.+.|+++|..+
T Consensus 84 ~C~~~~~~~----~~~l~V~~~-------------~-~~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~~~ 138 (184)
T 2ny1_B 84 ICEVEDQKE----EVQLLVFGL-------------T-ANSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRGKN 138 (184)
T ss_dssp EEEETTEEE----EEEEEEEEE-------------E-ESSCSEEETTCCEEEEEECCTTCCCEEEEECTTSCE
T ss_pred EEEEEcCCC----cEEEEEEEe-------------c-CCCCceeecCCCEEEEEEcCCCCCCEEEEEeCCCcc
Confidence 999987644 344555421 1 133457899999999999998899999999998654
No 367
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.56 E-value=5.5e-14 Score=113.34 Aligned_cols=134 Identities=11% Similarity=0.068 Sum_probs=92.2
Q ss_pred ecCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Eec------C-----------CCCCeEEEEe--CCEEEEEEc
Q psy14060 138 KKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FPI------T-----------SSPDFQIHTF--STKSILIMR 194 (283)
Q Consensus 138 ~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~~------~-----------~~~~~~~~~~--~~~~~l~i~ 194 (283)
..+....+.+|++++|.|.+.+.+ .+.+.|||+. ..+ . ...++.+... .....|.|.
T Consensus 11 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 90 (261)
T 2xqy_G 11 QQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLS 90 (261)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEc
Confidence 345567889999999999998765 5789999863 211 0 0235555443 345689999
Q ss_pred CCCCCCCEEEEEEEEeCCcee---EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeE
Q psy14060 195 QVFMEDSGVFAVIAENRGGKA---KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVY 269 (283)
Q Consensus 195 ~~~~~d~G~Y~C~a~n~~g~~---~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~ 269 (283)
++..+|+|.|.|.+.+..+.. .....|.|.... ..+|.+........+..|+.++|.|.+.+. |.+ .|.
T Consensus 91 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~p~~~v~~g~~v~L~C~~~g~~P~~i~v~ 164 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSSAK------TTAPSVYPLAPVCGDTTGSSVTLGCLVKGYFPEPVTLT 164 (261)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECSSC------CBCCEEEEECCCCC--CCSEEEEEEEEEEEBSSCCEEE
T ss_pred CCCcccCeEEEEEEecCCCcceEECCCEEEEEccCC------CCCCeEEEeCCCccccCCCcEEEEEEEEeEeCCCCEEE
Confidence 999999999999999864311 122466665311 134555543333346789999999999985 766 899
Q ss_pred EeeCCEEe
Q psy14060 270 WLKVSSLS 277 (283)
Q Consensus 270 W~~~g~~l 277 (283)
|+++|+.+
T Consensus 165 W~k~g~~~ 172 (261)
T 2xqy_G 165 WNSGSLSS 172 (261)
T ss_dssp EGGGTCCT
T ss_pred EecCCCcC
Confidence 99999765
No 368
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.56 E-value=1.9e-14 Score=112.61 Aligned_cols=133 Identities=14% Similarity=0.158 Sum_probs=92.0
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--EecC----------------CCCCeEEEEe--CCEEEEEEcCCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FPIT----------------SSPDFQIHTF--STKSILIMRQVF 197 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~~~----------------~~~~~~~~~~--~~~~~l~i~~~~ 197 (283)
+....+..|+++.|.|.+.+.+ .+.+.|||+. ..+. ...++.+... ....+|.|.++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 4557889999999999998764 4789999853 1110 1134555443 235689999999
Q ss_pred CCCCEEEEEEEEeCCce---eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeEEee
Q psy14060 198 MEDSGVFAVIAENRGGK---AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVYWLK 272 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~g~---~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~~ 272 (283)
.+|+|.|.|.+.|..+. ......|.|.... ..+|.+...+....+..|+.+.|.|.+.|. |.| .+.|++
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~p~~v~W~~ 160 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSSAQ------TTAPSVYPLAPGCGDTTSSTVTLGCLVKGYFPEPVTVTWNS 160 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECSSC------CBCCCEEEECCCSSCCCCSSEEEEEEEEEEBSSCCEEEEGG
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecCCC------CCCCeEEeccCChhhccCCcEEEEEEEeeeEcCCcEEEEcc
Confidence 99999999999886421 1123566665311 124555543323345789999999999987 877 999999
Q ss_pred CCEEec
Q psy14060 273 VSSLSD 278 (283)
Q Consensus 273 ~g~~l~ 278 (283)
+|..+.
T Consensus 161 ~g~~~~ 166 (215)
T 1c5d_H 161 GALSSD 166 (215)
T ss_dssp GTTCCS
T ss_pred CCccCc
Confidence 987643
No 369
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.55 E-value=3e-14 Score=96.47 Aligned_cols=87 Identities=17% Similarity=0.313 Sum_probs=73.6
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.+...+....+..|+.+.|.|.+.+.| +.+.|+|++..+....++.+. ...|.|.++..+|+|.|+|.+.|.
T Consensus 8 ~pp~~~~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~~~~~D~G~Y~C~a~n~ 82 (95)
T 2ckn_A 8 QPWGVPVEVESLLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLVESNRTRIT----GEEVEVRDSIPADSGLYACVTSSP 82 (95)
T ss_dssp CSCCBTTBBCCEEECTTSCEEEECCEESSC-CEEEEEBTTBCCCCCSSEEEC----SSEEEESSCCGGGSEEEEEEEEET
T ss_pred CCCEEEcCcceEEEcCCCeEEEEEECCCCC-CceEEEECCEecCCCCCEEEe----CCEEEECCCChHHCEEEEEEeccC
Confidence 466676677788999999999999999987 899999999988766665543 346999999999999999999999
Q ss_pred CceeEEEEEEEE
Q psy14060 212 GGKAKCSANLVV 223 (283)
Q Consensus 212 ~g~~~~~~~l~v 223 (283)
.|.....+.|.|
T Consensus 83 ~g~~~~~~~l~V 94 (95)
T 2ckn_A 83 SGSDTTYFSVNV 94 (95)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 999887777765
No 370
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.55 E-value=6.3e-14 Score=111.36 Aligned_cols=138 Identities=16% Similarity=0.171 Sum_probs=94.6
Q ss_pred EecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--Ee---c------------CCCCCeEEEE-eCCEEEEEEcCCCC
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FP---I------------TSSPDFQIHT-FSTKSILIMRQVFM 198 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~---~------------~~~~~~~~~~-~~~~~~l~i~~~~~ 198 (283)
...+....+..|+.+.|.|.+.. +.+.+.|||++ .. + ....++.+.. .....+|.|.++..
T Consensus 3 ~q~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~ 81 (238)
T 1bec_A 3 TQSPRNKVAVTGGKVTLSCQQTN-NHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATP 81 (238)
T ss_dssp EEECSEEEEETTCCEEEEEEESS-CCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCG
T ss_pred ccCCCeeEEeCCCcEEEEEEeCC-CCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCc
Confidence 44566788999999999999954 67899999863 11 1 0123444432 23456899999999
Q ss_pred CCCEEEEEEEEeCCc---e--eEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEEEEee-CCC-eeEE
Q psy14060 199 EDSGVFAVIAENRGG---K--AKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKISAT-KPL-DVYW 270 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g---~--~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W 270 (283)
+|+|.|.|.+.+..+ . ......|.|..... ...+|.+.. .+....+..|+.++|.|.+.|. |.+ .+.|
T Consensus 82 ~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W 157 (238)
T 1bec_A 82 SQTSVYFCASGGGRGSYAEQFFGPGTRLTVLEDLR----QVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSW 157 (238)
T ss_dssp GGCEEEEEEEESCTTCGGGCEECCCEEEEEESCGG----GCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEE
T ss_pred ccCEEEEEEEecCCCCccccccCCCEEEEEeccCC----CCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEE
Confidence 999999999998742 1 11224566664100 002565544 3344456689999999999986 655 8999
Q ss_pred eeCCEEecC
Q psy14060 271 LKVSSLSDV 279 (283)
Q Consensus 271 ~~~g~~l~~ 279 (283)
++||+.+..
T Consensus 158 ~~~g~~~~~ 166 (238)
T 1bec_A 158 WVNGKEVHS 166 (238)
T ss_dssp EETTEEECT
T ss_pred EECCEECCC
Confidence 999998754
No 371
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.54 E-value=4.9e-14 Score=114.06 Aligned_cols=140 Identities=14% Similarity=0.121 Sum_probs=93.6
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeec-----CCEEEEEeCC--Ee---cC---------CCCCeEEEEeCCEEEEEE
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDP-----LPTIKWFRED--FP---IT---------SSPDFQIHTFSTKSILIM 193 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p-----~~~~~W~k~~--~~---~~---------~~~~~~~~~~~~~~~l~i 193 (283)
.+.+...+..+.+.+|++++|.|.+.+.+ .+.+.|||+. .. +. ...++.+.......+|.|
T Consensus 15 ~~~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I 94 (268)
T 1x9q_A 15 DVVMTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSGSGTDFTLKI 94 (268)
T ss_dssp CCCEEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEE
T ss_pred cceEEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEcCCCEEEEEE
Confidence 45566667778899999999999998876 4789999853 11 10 124566655566778999
Q ss_pred cCCCCCCCEEEEEEEEeCCce-eEEEEEEEEEeccCCCCCCCCCC--------------eEEecCCceEEcCCCeEEEEE
Q psy14060 194 RQVFMEDSGVFAVIAENRGGK-AKCSANLVVEEKRQGGRGGVVPP--------------SFLTTISSAVINVGQLARFDA 258 (283)
Q Consensus 194 ~~~~~~d~G~Y~C~a~n~~g~-~~~~~~l~v~~~~~~~~~~~~~p--------------~~~~~~~~~~v~~g~~v~L~C 258 (283)
.++..+|+|.|+|.+.|..+. ......|.|...... ..+..|| .++..+....+.+|++++|.|
T Consensus 95 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~~~~~-~~p~~pp~~~~~~~~~~~~~~v~~~~~~~~~v~~G~~v~L~C 173 (268)
T 1x9q_A 95 NRVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKSSADD-AKKDAAKKDDAKKDDAKKDGGVKLDETGGGLVQPGGAMKLSC 173 (268)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEC-------------------------CGGGCEEEEECCEEECTTCCEEEEE
T ss_pred CCCChhHCEEEEEEEecCCCceEcCCEEEEEccCccC-CCccccccccccccccccccceEEECCCceEecCCCcEEEEE
Confidence 999999999999999987542 122345555532100 0000112 123344567899999999999
Q ss_pred EEEeeCC--CeeEEeeC
Q psy14060 259 KISATKP--LDVYWLKV 273 (283)
Q Consensus 259 ~~~g~p~--~~v~W~~~ 273 (283)
.+.+.+. +.+.|+++
T Consensus 174 ~~~~~~~~~~~v~W~k~ 190 (268)
T 1x9q_A 174 VTSGFTFGHYWMNWVRQ 190 (268)
T ss_dssp EEESSCGGGCEEEEEEE
T ss_pred EecCccccccEEEEEEe
Confidence 9998753 68999985
No 372
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.54 E-value=7.9e-15 Score=110.61 Aligned_cols=120 Identities=12% Similarity=0.096 Sum_probs=85.9
Q ss_pred ceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC--C--------CCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 142 PCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS--S--------PDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 142 ~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~--~--------~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
...+..|++++|.|.+.+ |.+.+.|+|++..+.. . .+.++.......+|.|.++..+|+|.|.|.+.|.
T Consensus 4 ~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~~i~~~~~~~~~~~~~~~~R~~~~~~~~sL~I~~v~~~DsG~Y~C~~~n~ 82 (171)
T 1ccz_A 4 QIYGVVYGNVTFHVPSNV-PLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLDTVSGSLTIYNLTSSDEDEYEMESPNI 82 (171)
T ss_dssp EEEEETTCCEEECCCCSS-CCSCEEEEETTEEEEEEETTEEEECGGGTTSEEECTTTCCEEECSCCGGGCEEEEEECTTC
T ss_pred EEEEEcCCCEEEcCCCCC-CcceEEEEeCCcEEEEEcCCCcccccccCCcEEEeCCCCeEEECCCChhhCceEEEEEeCC
Confidence 356788999999999854 8889999998864321 0 0001222223346999999999999999999988
Q ss_pred CceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecC
Q psy14060 212 GGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 212 ~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~ 279 (283)
.+ ...+.|.|.... ..|.+...... ..|.|.+.+.|.|.+.|++||+.+..
T Consensus 83 ~~--~~~~~L~V~~~~-------~~p~i~~~~~~--------~~L~C~~~~~p~p~i~W~~~~~~l~~ 133 (171)
T 1ccz_A 83 TD--TMKFFLYVLEMV-------SKPMIYWECSN--------ATLTCEVLEGTDVELKLYQGKEHLRS 133 (171)
T ss_dssp CS--CEEEEEEEECCC-------CCCEEEEETTT--------TEEEEECSSCSSCEEEEEETTEEEEE
T ss_pred CC--cEEEEEEEECcC-------CCCEEEEecCC--------cEEEEEeCCCCCcEEEEEECCEECcC
Confidence 77 556777777531 23444432211 27999999989999999999998754
No 373
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.54 E-value=2.1e-14 Score=99.90 Aligned_cols=96 Identities=25% Similarity=0.409 Sum_probs=81.8
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEE-eCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHT-FSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|++++..+.......... ......|.|.++..+|+|.|+|.+.
T Consensus 7 ~~~P~i~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~ 86 (110)
T 2dm3_A 7 GFRPHFLQAPGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDGKPVRPDSAHKMLVRENGVHSLIIEPVTSRDAGIYTCIAT 86 (110)
T ss_dssp CCCCEEEECCCEEEEESSSCBCCEEEEECSSCCEEECBBSSSBCCCCSSEEEEECTTSCEEEEESSCCGGGCSBBCEEEE
T ss_pred CCCCcEEeCCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECCEECCCCCceEEEEecCCeEEEEEeeCCcccCEEEEEEEE
Confidence 357888888888999999999999999999999999999998887655544333 2335689999999999999999999
Q ss_pred eCCceeEEEEEEEEEec
Q psy14060 210 NRGGKAKCSANLVVEEK 226 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~~ 226 (283)
|..|.....+.|.|...
T Consensus 87 n~~g~~~~~~~l~V~~~ 103 (110)
T 2dm3_A 87 NRAGQNSFSLELVVAAK 103 (110)
T ss_dssp CSSCEEEECCEEEEECC
T ss_pred CCCCEEEEEEEEEEeCC
Confidence 99999888889988863
No 374
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.54 E-value=3.3e-14 Score=110.57 Aligned_cols=127 Identities=8% Similarity=0.061 Sum_probs=78.1
Q ss_pred cCCCcEEEEEEEeeec----CCEEEEEeCCEecCCCCC-eEEEEeCCE----EEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 146 FEQDQARFEVEFDGDP----LPTIKWFREDFPITSSPD-FQIHTFSTK----SILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 146 ~~g~~v~l~C~~~g~p----~~~~~W~k~~~~~~~~~~-~~~~~~~~~----~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
..|+.+.|.|.+.|.+ ...+.|+|++..+..... ......+.. ..|.|......|.|.|+|.+.|..+...
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 7899999999999875 249999999987653210 001111111 1233323333449999999999877643
Q ss_pred EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-eeEEeeCCEEec
Q psy14060 217 CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DVYWLKVSSLSD 278 (283)
Q Consensus 217 ~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~~~g~~l~ 278 (283)
....+.+... ...+|.+...+.......|..+.|.|.+.|. |.+ .|.|++||+.+.
T Consensus 96 ~~~~v~~~~~------~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~ 153 (207)
T 1l6x_A 96 IEKTISKAKG------QPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPEN 153 (207)
T ss_dssp EEEEECCCCS------CCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEEC
T ss_pred eEEEeccCCC------CCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeecc
Confidence 3333321000 0135665544333222356679999999995 443 899999999875
No 375
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.54 E-value=1.4e-13 Score=109.33 Aligned_cols=154 Identities=9% Similarity=0.070 Sum_probs=94.7
Q ss_pred eeeecCcEEEEEEEccCc-cceEEee-----------------------cCCCEEEEE-cCCEEEEEEccCCCCCCeEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EIVRKIT-----------------------ATETTEMEH-KGKIQERVVDASELDDDGYYA 113 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i~~~~~-----------------------~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~ 113 (283)
.+.+|+.++|.|.+.+.. .+. |.. ...++.+.. ......|.|.+++.+|+|.|.
T Consensus 10 ~v~~G~~v~L~C~~~~~~~~v~-W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 88 (238)
T 1bec_A 10 VAVTGGKVTLSCQQTNNHNNMY-WYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRPSQEQFSLILELATPSQTSVYF 88 (238)
T ss_dssp EEETTCCEEEEEEESSCCSEEE-EEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECCSSSEEEEEESSCCGGGCEEEE
T ss_pred EEeCCCcEEEEEEeCCCCceEE-EEEECCCCCEEEEEEEeCCCcccCCCccceEEEEecCCCEEEEEEecCCcccCEEEE
Confidence 367788999999985432 222 221 123444432 245689999999999999999
Q ss_pred EEEEecc--------eeeeeeccCC----CCCCeEEe-cCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCC
Q psy14060 114 ITERKYY--------ALSDLSEQKP----AKPPVFTK-KIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSP 178 (283)
Q Consensus 114 C~a~n~~--------~~~~~~~~~~----~~~p~~~~-~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~ 178 (283)
|.+.+.. +......+.. ..+|.+.. .+....+..|+.+.|.|.+.|. |.+ .+.|++++..+....
T Consensus 89 C~~~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~~~~~~ 168 (238)
T 1bec_A 89 CASGGGRGSYAEQFFGPGTRLTVLEDLRQVTPPKVSLFEPSKAEIANKQKATLVCLARGFFPDHVELSWWVNGKEVHSGV 168 (238)
T ss_dssp EEEESCTTCGGGCEECCCEEEEEESCGGGCBCCEEEEECCCSTTCSSSCSCSEEEEEEEEBSCCEEEEEEETTEEECTTE
T ss_pred EEEecCCCCccccccCCCEEEEEeccCCCCCCCceEEECCChHHcccCCceEEEEEEeeEeCCCcEEEEEECCEECCCce
Confidence 9998863 1111111111 23565543 3344456679999999999986 655 899999998876532
Q ss_pred Ce---EEEEeCCE----EEEEEcCCCCCC-CEEEEEEEEeCCc
Q psy14060 179 DF---QIHTFSTK----SILIMRQVFMED-SGVFAVIAENRGG 213 (283)
Q Consensus 179 ~~---~~~~~~~~----~~l~i~~~~~~d-~G~Y~C~a~n~~g 213 (283)
.. .....+.. +.|.|......| .|.|+|.+.|...
T Consensus 169 ~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l 211 (238)
T 1bec_A 169 STDPQAYKESNYSYCLSSRLRVSATFWHNPRNHFRCQVQFHGL 211 (238)
T ss_dssp EECSSCEEEETTEEEEEEEECCCHHHHTCTTCEEEEEEEECCC
T ss_pred ecccceEeCCCCCEEEEEEEEEcHHHhccCCCeEEEEEEcCCC
Confidence 11 01122222 123333333333 6789999999753
No 376
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.54 E-value=1.4e-13 Score=109.05 Aligned_cols=133 Identities=11% Similarity=0.053 Sum_probs=87.3
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--E---ec---C----------CCCCeEEEEe--CCEEEEEEcCCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--F---PI---T----------SSPDFQIHTF--STKSILIMRQVF 197 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~---~~---~----------~~~~~~~~~~--~~~~~l~i~~~~ 197 (283)
+....+..|++++|.|.+.+.+ .+.+.|||.. . .+ . ...++.+... ....+|.|.++.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 4557889999999999998764 5789999853 1 11 0 1245555543 345689999999
Q ss_pred CCCCEEEEEEEEeCC--ce----eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCC-CeEEEEEEEEee-CCC-ee
Q psy14060 198 MEDSGVFAVIAENRG--GK----AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVG-QLARFDAKISAT-KPL-DV 268 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~--g~----~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g-~~v~L~C~~~g~-p~~-~v 268 (283)
.+|+|.|+|.+.+.. +. ......|.|.... ..+|.+........+..| +.++|.|.+.|. |.| .+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~~~------~~~P~v~~~~p~~~~~~g~~~v~L~C~~~g~~P~p~~v 160 (232)
T 1dn0_B 87 AADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSSGS------ASAPTLFPLVSCENSPSDTSSVAVGCLAQDFLPDSITF 160 (232)
T ss_dssp GGGCEEEEEEECSSTTSCSCCSEECCCEEEEECSSC------CBCCEEEEEECC------CCSEEEEEEEEEEBSSCCEE
T ss_pred cccCEEEEEEEecCCcCCchhhhcccceEEEEccCC------CCCCceEEeccccccCCCCCcEEEEEEEEEEeCCCeEE
Confidence 999999999998321 11 1123466665410 134555432222345578 999999999986 776 89
Q ss_pred EEee-CCEEec
Q psy14060 269 YWLK-VSSLSD 278 (283)
Q Consensus 269 ~W~~-~g~~l~ 278 (283)
.|++ ||+.+.
T Consensus 161 ~W~~~~g~~l~ 171 (232)
T 1dn0_B 161 SWKYKNNSDIS 171 (232)
T ss_dssp EEEETTSCEEC
T ss_pred EEEcCCCCcee
Confidence 9999 998764
No 377
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.54 E-value=8.8e-15 Score=114.37 Aligned_cols=164 Identities=13% Similarity=0.023 Sum_probs=103.8
Q ss_pred eeeecCcEEEEEEEccCccce-------EEeecC--CCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee-eeecc
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-------RKITAT--ETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALS-DLSEQ 128 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-------~~~~~~--~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-~~~~~ 128 (283)
.+.+|+.+.|.|.+.|.|... ..+... .++.+...+....|.|.++..+|+|.|+|.+.|..+.. ....+
T Consensus 29 ~~~~G~~v~l~C~~~g~p~p~i~W~~~g~~l~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 108 (215)
T 3mtr_A 29 YTWEGNQVNITCEVFAYPSATISWFRDGQLLPSSNYSNIKIYNTPSASYLEVTPDSENDFGNYNCTAVNRIGQESLEFIL 108 (215)
T ss_dssp EECTTCCEEEEEEEEEESCCEEEEEETTEESSCSSSCSEEEEEETTEEEEEECCCSGGGCEEEEEEEECSSCEEEEEEEE
T ss_pred EEECCCCEEEEEEEeecCCCEEEEEECCeECCCCCCccEEEecCCCeeEEEEecCChhhCeEEEEEEEECCCceEEEEEE
Confidence 366788999999999988433 233322 45666665668899999999999999999999998843 22333
Q ss_pred CCCCCCeEEecCCceeecCCCcEEEEEEEee----ecCC--EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCE
Q psy14060 129 KPAKPPVFTKKIQPCRAFEQDQARFEVEFDG----DPLP--TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSG 202 (283)
Q Consensus 129 ~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g----~p~~--~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G 202 (283)
.+..+|....... ....+..+.|.|.... .|.. .+.|.+++..........+........+.|.++...+.|
T Consensus 109 ~v~~~P~~p~~~~--~~~~~~~~~l~w~~p~~~~~~pi~~y~v~~~~~~~~~w~~~~~~~~~~~~~~~l~i~~L~~~~~y 186 (215)
T 3mtr_A 109 VQADTPSSPSIDQ--VEPYSSTAQVQFDEPEATGGVPILKYKAEWRAVGEEVWHSKWYDAKEASMEGIVTIVGLKPETTY 186 (215)
T ss_dssp EECCCCCCCEEEE--EEEETTEEEEEEECCSCCCSSCEEEEEEEEEETTCCCCEEEEEEHHHHHHHTEEEEECCCTTCEE
T ss_pred EECCCCCCCcceE--EEEecceEEEEEecCCccCCCceEEEEEEEEECCCCcccccccccccccccccEEECCCCCCCEE
Confidence 3333332211111 1233567888887422 1222 367887765321100000000011146999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEEE
Q psy14060 203 VFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 203 ~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
.|.|.|.|..|....+..+.+.
T Consensus 187 ~~~~~A~N~~G~s~~S~~~~v~ 208 (215)
T 3mtr_A 187 AVRLAALNGKGLGEISAASEFK 208 (215)
T ss_dssp EEEEEEEESSCBCCCCCCEEEE
T ss_pred EEEEEEEeCCcccCcccceeeE
Confidence 9999999999987666555554
No 378
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.54 E-value=3.1e-14 Score=97.31 Aligned_cols=93 Identities=26% Similarity=0.504 Sum_probs=78.0
Q ss_pred CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCC-CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEE
Q psy14060 130 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITS-SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 130 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~-~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 208 (283)
...+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+.. ..++.+.. ...|.|.++..+|+|.|+|.+
T Consensus 5 ~~~~P~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a 81 (100)
T 2edj_A 5 SSGPPIILQGPANQTLAVDGTALLKCKATGDPLPVISWLKEGFTFPGRDPRATIQE---QGTLQIKNLRISDTGTYTCVA 81 (100)
T ss_dssp CCSSCEEEECCCCEEEESSSEEEECCEEECSSCCEEEEEESSSEESSSCSSCEECT---TCCEEEESCCTTTCCEEEEEE
T ss_pred CCCCCEEEeCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECCEECCCCCCCEEEcC---CCEEEEccCCcccCEEEEEEE
Confidence 34688888888888999999999999999999999999999988763 33333322 235999999999999999999
Q ss_pred EeCCceeEEEEEEEEEe
Q psy14060 209 ENRGGKAKCSANLVVEE 225 (283)
Q Consensus 209 ~n~~g~~~~~~~l~v~~ 225 (283)
.|..|.....+.|.|.+
T Consensus 82 ~n~~g~~~~~~~l~V~~ 98 (100)
T 2edj_A 82 TSSSGETSWSAVLDVTE 98 (100)
T ss_dssp ECSSCCCBCCEEEEEES
T ss_pred EcCCCCEEEEEEEEEec
Confidence 99999888888888875
No 379
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.53 E-value=1.7e-14 Score=100.05 Aligned_cols=96 Identities=21% Similarity=0.347 Sum_probs=70.8
Q ss_pred cCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEE
Q psy14060 128 QKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVI 207 (283)
Q Consensus 128 ~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 207 (283)
+.+..+|.+...+....+..|+.+.|.|.+.|.|.+.+.|++++..+....++.+. .....|.|.++..+|+|.|+|.
T Consensus 5 v~~~~~P~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~~~~~~~~~~~~--~~~~~L~i~~v~~~D~G~Y~C~ 82 (108)
T 3kvq_A 5 VLERVAPTITGNLENQTTSIGESIEVSCTASGNPPPQIMWFKDNETLVEDSGIVLK--DGNRNLTIRRVRKEDEGLYTCQ 82 (108)
T ss_dssp ------CCCBSCCCCEEEETTCCEEEECBCC----CCEEEEESSSBCCCBTTEEEE--TTTTEEEECSCCGGGCEEEEEE
T ss_pred ECccCCCceecCCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCeEcccCCCeEEe--CCCcEEEEeecCcccCEEEEEE
Confidence 44556788888888889999999999999999999999999999888765554443 3345799999999999999999
Q ss_pred EEeCCceeEEEEEEEEEe
Q psy14060 208 AENRGGKAKCSANLVVEE 225 (283)
Q Consensus 208 a~n~~g~~~~~~~l~v~~ 225 (283)
+.|..|.....+.|.|..
T Consensus 83 a~n~~g~~~~~~~l~V~~ 100 (108)
T 3kvq_A 83 ACSVLGCAKVEAFFIIEG 100 (108)
T ss_dssp EC----CEEEEEEEEEEC
T ss_pred EEeCCCceEEEEEEEEeC
Confidence 999999999999999885
No 380
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.53 E-value=3.5e-14 Score=113.95 Aligned_cols=153 Identities=11% Similarity=0.053 Sum_probs=93.4
Q ss_pred eeeecCcEEEEEEEccCccce-EEee---c--------------------CC-CEEEEEcCCEEEEEEccCCCCCCeEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RKIT---A--------------------TE-TTEMEHKGKIQERVVDASELDDDGYYA 113 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~~~---~--------------------~~-~~~~~~~~~~~~L~i~~~~~~D~G~Y~ 113 (283)
.+.+|++++|.|.+.+.+... .|.. . .. ++.+...+... |.|.+++.+|+|.|+
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~DsG~Y~ 90 (253)
T 3to4_D 12 LVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMSQGRTLY 90 (253)
T ss_dssp EEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCSSCEEEE
T ss_pred EEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChhhCeEEE
Confidence 366788999999887666211 2211 0 01 44443322222 999999999999999
Q ss_pred EEEEecce---------ee-eeecc---CCCCCCeEEec-CCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCC
Q psy14060 114 ITERKYYA---------LS-DLSEQ---KPAKPPVFTKK-IQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSS 177 (283)
Q Consensus 114 C~a~n~~~---------~~-~~~~~---~~~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~ 177 (283)
|.+.+..+ .. .+... ....+|.+... +....+..|+.++|.|.+.| +|.+ .+.|++++..+...
T Consensus 91 C~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~l~~~ 170 (253)
T 3to4_D 91 CTSSADHWTNTGQLYFGEGSKLTVLEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSG 170 (253)
T ss_dssp EEEECSCCSTTCCEEECCCEEEEEESCSTTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECTT
T ss_pred EEEecCCCCcccceEECCCEEEEEecCCCCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEEEECCEECCCc
Confidence 99875422 11 11111 12245555432 23333445689999999998 5666 89999999887542
Q ss_pred CCeE---EE-----EeCC---EEEEEEcCCCCCC-CEEEEEEEEeCC
Q psy14060 178 PDFQ---IH-----TFST---KSILIMRQVFMED-SGVFAVIAENRG 212 (283)
Q Consensus 178 ~~~~---~~-----~~~~---~~~l~i~~~~~~d-~G~Y~C~a~n~~ 212 (283)
.... .. ..+. .+.|.|......| .|.|+|.+.|..
T Consensus 171 ~~~~~~~~~~~~~~~~g~~~~~s~l~i~~~~~~d~~~~ytC~v~h~~ 217 (253)
T 3to4_D 171 VSTDPQPLKEQPALNDSRYALSSRLRVSATFWQNPRNHFRCQVQFYG 217 (253)
T ss_dssp EEECSSCEESSTTCTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECC
T ss_pred eecccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEeCC
Confidence 1100 00 0111 1357777776666 779999999875
No 381
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.53 E-value=3.9e-13 Score=107.50 Aligned_cols=160 Identities=8% Similarity=0.083 Sum_probs=98.9
Q ss_pred eeeecCcEEEEEEEccCc----cce----------EEe--------------ecCCCEEEEEc--CCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIV----------RKI--------------TATETTEMEHK--GKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~----------~~~--------------~~~~~~~~~~~--~~~~~L~i~~~~~~D 108 (283)
.+.+|++|+|.|.+.+.. .+. ..+ ....|+.+..+ ....+|.|.+++.+|
T Consensus 10 ~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 89 (248)
T 3u2s_H 10 VVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSLRVED 89 (248)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCCHHH
Confidence 366788999999997622 222 111 01245555432 457889999999999
Q ss_pred CeEEEEEEEecc-------------------------eeeeeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeee-
Q psy14060 109 DGYYAITERKYY-------------------------ALSDLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD- 160 (283)
Q Consensus 109 ~G~Y~C~a~n~~-------------------------~~~~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~- 160 (283)
+|.|.|.+.+.. +......+ ....+|.+........+..|+.+.|.|.+.+.
T Consensus 90 sG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~ 169 (248)
T 3u2s_H 90 TATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYF 169 (248)
T ss_dssp CEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCCCBCCEEEEECCC------CEEEEEEEEEEEB
T ss_pred CEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccCCCCCEEEEeCCCccccCCCcEEEEEEEeeEE
Confidence 999999887631 11111112 22345655544444455679999999999874
Q ss_pred c-CCEEEEEeCCEecCC---------CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 161 P-LPTIKWFREDFPITS---------SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 161 p-~~~~~W~k~~~~~~~---------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
| .+.+.|++++..+.. ...+.+ .+.|.|......| |.|+|.+.|..+.......+.+.
T Consensus 170 P~~~~v~W~~~g~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~l~~~ 237 (248)
T 3u2s_H 170 PEPVTVSWNSGALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 237 (248)
T ss_dssp SSCCEEEEGGGTBCTTEEECCCEECTTSCEEE-----EEEEEEEGGGBTT-BCCEEEEEEGGGTEEEEEECCC-
T ss_pred CCCeEEEEeECCccCceeecCceECCCCCEEE-----EEEEEEChhhcCC-CeEEEEEEECCCCcceEEEEccC
Confidence 5 457999998864321 111211 2358888888788 99999999988776655555443
No 382
>1i1c_A IGG2A, IG gamma-2A chain C region; FC, immune system; HET: NAG FUL BMA MAN FUC; 2.70A {Rattus norvegicus} SCOP: b.1.1.2 b.1.1.2 PDB: 1i1a_D*
Probab=99.53 E-value=1.1e-14 Score=115.92 Aligned_cols=155 Identities=10% Similarity=0.052 Sum_probs=97.3
Q ss_pred eeecCcEEEEEEEccC---cc-ce-EEeecCCCEE-------EEEcC----CEEEEEEccCCCCCCeEEEEEEEecceee
Q psy14060 60 IHTAKSQQVQKEKKGD---KE-IV-RKITATETTE-------MEHKG----KIQERVVDASELDDDGYYAITERKYYALS 123 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~---~~-i~-~~~~~~~~~~-------~~~~~----~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~ 123 (283)
+.+|+.++|.|.+.|. |. +. .|........ ....+ ....|.|.+++.+|+|.|+|.+.|..+..
T Consensus 29 v~~G~~v~L~C~~~g~~~~P~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 108 (239)
T 1i1c_A 29 LGGGLTPKVTCVVVDISQNDPEVRFSWFIDDVEVHTAQTHAPEKQSNSTLRSVSELPIVERDWLNGKTFKCKVNSGAFPA 108 (239)
T ss_dssp TTSSSCCEEEEEEEEECTTCCCCEEEEEESSCEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECSSSSS
T ss_pred cccCCcEEEEEEEecCccCCCCCEEEEEECCccccCcccccceEcCCCcEEEEEEEEEEhhHccCCCeEEEEEecccCCC
Confidence 4578899999999887 52 22 4443221110 00111 24579999999999999999999887632
Q ss_pred ---eeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEecCCCCC--eEEEEeCC---EEEE
Q psy14060 124 ---DLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPITSSPD--FQIHTFST---KSIL 191 (283)
Q Consensus 124 ---~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~~~~~--~~~~~~~~---~~~l 191 (283)
....+ .+..+|.+...+.......|+.+.|.|.+.|. |. ..+.|+|+|..+..... .....++. .+.|
T Consensus 109 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~dgt~~~~s~l 188 (239)
T 1i1c_A 109 PIEKSISKPEGTPRGPQVYTMAPPKEEMTQSQVSITCMVKGFYPPDIYTEWKMNGQPQENYKNTPPTMDTDGSYFLYSKL 188 (239)
T ss_dssp CEEEEECCCSSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEE
T ss_pred CcEEEEecCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeeeECCCeEEEEEECCEECCCceecCceECCCCCEEEEEEE
Confidence 12112 44567776655444333457889999999984 54 48999999998753211 11111111 1235
Q ss_pred EEcCCCCCCCEEEEEEEEeCCce
Q psy14060 192 IMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 192 ~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
.|......|.|.|+|.+.|....
T Consensus 189 ~v~~~~~~~~g~YtC~v~n~~l~ 211 (239)
T 1i1c_A 189 NVKKETWQQGNTFTCSVLHEGLE 211 (239)
T ss_dssp EEEHHHHHTTCCEEEEEECTTSG
T ss_pred EEChhhcCCCCEEEEEEECCCCC
Confidence 55544445789999999998643
No 383
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.53 E-value=1.2e-13 Score=110.12 Aligned_cols=139 Identities=15% Similarity=0.199 Sum_probs=92.2
Q ss_pred EEecCCceeecCCCcEEEEEEEeee--cCCEEEEEeCC--Ee---c-----------C---CCCCeEEEEeC--CEEEEE
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGD--PLPTIKWFRED--FP---I-----------T---SSPDFQIHTFS--TKSILI 192 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~--~~---~-----------~---~~~~~~~~~~~--~~~~l~ 192 (283)
+...+..+.+..|++++|.|.+.+. +.+.+.|||+. .. + . ...++.+.... ...+|.
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~ 83 (242)
T 1hxm_B 4 LEQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLT 83 (242)
T ss_dssp EECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEE
T ss_pred cCcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEE
Confidence 4445667889999999999999875 56789999843 11 1 0 23455554433 467899
Q ss_pred EcCCCCCCCEEEEEEEEeCCc-----e--eEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEEEEee-
Q psy14060 193 MRQVFMEDSGVFAVIAENRGG-----K--AKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKISAT- 263 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~g-----~--~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~~~g~- 263 (283)
|.++..+|+|.|.|.+.+... . ......|.|...... ...+|.... .+....+..|+.++|.|.+.|.
T Consensus 84 I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~~~~~---~~~~p~~~v~~p~~~~~~~g~~v~L~C~~~g~~ 160 (242)
T 1hxm_B 84 IHNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITDKQLD---ADVSPKPTIFLPSIAETKLQKAGTYLCLLEKFF 160 (242)
T ss_dssp ECSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEESSCCC---SCCSCBCCCCCCCGGGGGSSSCEEEEEEEEEES
T ss_pred ECCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcccccC---CCcCCCceEECCChhhcccCCCceEEEEEeeEE
Confidence 999999999999999988631 1 112356777642100 000222211 1333445679999999999987
Q ss_pred CC-CeeEEeeCCE-Ee
Q psy14060 264 KP-LDVYWLKVSS-LS 277 (283)
Q Consensus 264 p~-~~v~W~~~g~-~l 277 (283)
|. +.+.|+++|. .+
T Consensus 161 P~~~~v~W~~~~~~~l 176 (242)
T 1hxm_B 161 PDVIKIHWEEKKSNTI 176 (242)
T ss_dssp SCCEEEEEEESSSCCC
T ss_pred CCCeEEEEEcCCCEee
Confidence 54 6899999987 44
No 384
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.53 E-value=4e-14 Score=113.85 Aligned_cols=132 Identities=15% Similarity=0.100 Sum_probs=84.3
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--Ee---c---C-----------CCCCeEEEEe--CCEEEEEEcCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FP---I---T-----------SSPDFQIHTF--STKSILIMRQV 196 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~---~---~-----------~~~~~~~~~~--~~~~~l~i~~~ 196 (283)
+....+..|++++|.|.+.+.+ .+.+.|||.. .. + . ...++.+... ....+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 4556889999999999998765 5789999853 11 1 0 1235555543 34678999999
Q ss_pred CCCCCEEEEEEEEeCCc----------e---eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee
Q psy14060 197 FMEDSGVFAVIAENRGG----------K---AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT 263 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~g----------~---~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~ 263 (283)
..+|+|.|+|.+.+..+ . ......|.|.... ..+|.+........+..|+.++|.|.+.|.
T Consensus 87 ~~~DsG~Y~C~~~~~~g~~~~~~~~~~~~~~~~~~t~L~V~~~~------~~~P~v~~~~p~~~~~~g~~v~L~C~~~g~ 160 (257)
T 3bn9_D 87 RAEDTAVYYCARPYLTYPQRRGPQNVSPFDNWGQGTMVTVSSAS------TKGPSVFPLAPSSKSTSGGTAALGCLVKDY 160 (257)
T ss_dssp CGGGCEEEEEEEECCSSTTSCCCCTTCCEEEECCCEEEEECSSC------CBCCEECCCCC-----------CCCEEEEE
T ss_pred ChhhCEEEEEEEecCCCcccccccccceeeeeCCcEEEEecCCC------CcCCcEEEecCcccccCCCcEEEEEEEeeE
Confidence 99999999999998764 1 1122466665311 134655443333346789999999999986
Q ss_pred -CCC-eeEEeeCCEEe
Q psy14060 264 -KPL-DVYWLKVSSLS 277 (283)
Q Consensus 264 -p~~-~v~W~~~g~~l 277 (283)
|.| .|.|+++|+.+
T Consensus 161 ~P~pi~v~W~k~g~~~ 176 (257)
T 3bn9_D 161 FPEPVTVSWNSGALTS 176 (257)
T ss_dssp BSSCCEEEETTTTCCS
T ss_pred ECCCcEEEEeeCCCcC
Confidence 777 89999999864
No 385
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.52 E-value=9.6e-14 Score=109.78 Aligned_cols=154 Identities=12% Similarity=0.049 Sum_probs=94.2
Q ss_pred eeeecCcEEEEEEEccC--c--cce--EE--------ee-------------cCCCEEEEEc--CCEEEEEEccCCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGD--K--EIV--RK--------IT-------------ATETTEMEHK--GKIQERVVDASELDDD 109 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~--~--~i~--~~--------~~-------------~~~~~~~~~~--~~~~~L~i~~~~~~D~ 109 (283)
.+.+|++++|.|.+.+. + .+. +. +. ...|+.+... .+...|.|.+++.+|+
T Consensus 12 ~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 91 (230)
T 1ypz_F 12 SRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIYSLEEEDE 91 (230)
T ss_dssp EEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEECSCCGGGC
T ss_pred EEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEECcCChhhC
Confidence 36678899999999874 2 332 11 10 1244554432 2567999999999999
Q ss_pred eEEEEEEEec-------ceeeeeeccC--C-----CCCCeE-EecCCceeecCCCcEEEEEEEeee-cC-CEEEEEe-CC
Q psy14060 110 GYYAITERKY-------YALSDLSEQK--P-----AKPPVF-TKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFR-ED 171 (283)
Q Consensus 110 G~Y~C~a~n~-------~~~~~~~~~~--~-----~~~p~~-~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k-~~ 171 (283)
|.|.|.+.+. .+......+. . ..+|.. +..+....+..|+.+.|.|.+.+. |. +.++|++ ++
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~p~~~~v~~g~~~~L~C~~~g~~P~~~~v~W~~~~g 171 (230)
T 1ypz_F 92 AIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFLPSVAETNLHKTGTYLCLLEAFFPDVIRVYWKEKDG 171 (230)
T ss_dssp SEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEECCCHHHHHHHSCEEEEEEEEEESSCCCEEEEECTTS
T ss_pred EEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEECCCchhhccCCcceEEEEEeeecCCCeEEEEEccCC
Confidence 9999999874 1111111121 0 012221 122333345568899999999986 75 5999999 77
Q ss_pred EecCCCCCeEEEEeCC----EEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 172 FPITSSPDFQIHTFST----KSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 172 ~~~~~~~~~~~~~~~~----~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
..+.......+...+. .+.|.|..... + |.|+|.+.|....
T Consensus 172 ~~l~~~~~~~~~~~~~~~~~~s~L~i~~~~~-~-~~ytC~v~~~~~~ 216 (230)
T 1ypz_F 172 NTILDSQEGDTLKTNDTYMKFSWLTVPERAM-G-KEHRCIVKHENNK 216 (230)
T ss_dssp SCBCCCEECCCEEETTEEEEEEEEEECGGGT-T-SCEEEEEECSSCT
T ss_pred eEccccccceeecCCCCEEEEEEEEEEhhhC-C-CEEEEEEEECCCC
Confidence 6664321101111222 24688887765 4 9999999998654
No 386
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.52 E-value=1.5e-13 Score=95.39 Aligned_cols=92 Identities=17% Similarity=0.226 Sum_probs=72.3
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecC---CEEEEEeCCEecC---CCCCeEEEEe--C----CEEEEEEcCCCCCC
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPL---PTIKWFREDFPIT---SSPDFQIHTF--S----TKSILIMRQVFMED 200 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~---~~~~W~k~~~~~~---~~~~~~~~~~--~----~~~~l~i~~~~~~d 200 (283)
.|.|+..+..+.+..|+.++|.|.+.|.|. |.+.|||++.... ...++.+... . ....|.|.++..+|
T Consensus 4 ~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 83 (108)
T 3cx2_A 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSYDRASKVYLFELHITDAQPAF 83 (108)
T ss_dssp CCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETTTEEGGGGCBTTEEEEEEEETTTTEEEEEEEECSCCGGG
T ss_pred ccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCCcccccccCCceEEEeeEEecccccceEEEEEecCCCcc
Confidence 466777788889999999999999999988 9999999873221 1234443321 1 14579999999999
Q ss_pred CEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 201 SGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
+|.|+|.+.|..|...+.+.|.|.
T Consensus 84 ~G~Y~C~a~N~~G~~~~~~~L~V~ 107 (108)
T 3cx2_A 84 TGSYRCEVSTKDKFDCSNFNLTVH 107 (108)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CEEEEEEEecCCCceEEEEEEEEe
Confidence 999999999999999999998875
No 387
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.52 E-value=9.5e-13 Score=103.98 Aligned_cols=162 Identities=12% Similarity=0.107 Sum_probs=101.9
Q ss_pred eeecCcEEEEEEEccCc----cce----------EEe--------------ecCCCEEEEEc--CCEEEEEEccCCCCCC
Q psy14060 60 IHTAKSQQVQKEKKGDK----EIV----------RKI--------------TATETTEMEHK--GKIQERVVDASELDDD 109 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~----~i~----------~~~--------------~~~~~~~~~~~--~~~~~L~i~~~~~~D~ 109 (283)
+.+|++|+|.|.+.+.. .+. ..+ ....|+.+..+ ....+|.|.+++.+|+
T Consensus 12 v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 91 (230)
T 3n9g_H 12 RKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSLRSEDT 91 (230)
T ss_dssp ECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCCChhhC
Confidence 66788999999997521 111 111 01246665433 3578899999999999
Q ss_pred eEEEEEEEecc-----------eeeeeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeee-c-CCEEEEEeCCEec
Q psy14060 110 GYYAITERKYY-----------ALSDLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-P-LPTIKWFREDFPI 174 (283)
Q Consensus 110 G~Y~C~a~n~~-----------~~~~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p-~~~~~W~k~~~~~ 174 (283)
|.|.|.+.+.. +......+ ....+|.+........+..|+.+.|.|.+.+. | .+.+.| ++..+
T Consensus 92 G~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~~v~W--~~~~~ 169 (230)
T 3n9g_H 92 AVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSGAL 169 (230)
T ss_dssp EEEEEEEECCCSSSTTCCEEEECCCEEEEECSSCCBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCCEEEE--GGGTB
T ss_pred EEEEEEEccCCCCcccccccccCCCEEEEEEecCCCCCEEEecCCCccccCCCCEEEEEEEEeEECCCEEEEE--CCccc
Confidence 99999987643 11111122 22345655544444456689999999999884 4 357999 44433
Q ss_pred CCCCC-e-EEEEeC----CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 175 TSSPD-F-QIHTFS----TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 175 ~~~~~-~-~~~~~~----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
..... . .....+ ..+.|.|......| |.|+|.+.|..+.......+.+.
T Consensus 170 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~v~ 224 (230)
T 3n9g_H 170 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKRVEPK 224 (230)
T ss_dssp CTTEEECCCEECTTSCEEEEEEEEEESTTBTT-BCCEEEEEEGGGTEEEEEECCCC
T ss_pred CCCeEeCCceECCCCCEEEEEEEEECHHHcCC-CeEEEEEEECCCCcceEEEccCC
Confidence 22100 0 000001 12468899999889 99999999988776666665554
No 388
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.52 E-value=1.2e-13 Score=93.44 Aligned_cols=87 Identities=30% Similarity=0.387 Sum_probs=74.6
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCC
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
.+.|...+....+..|+.+.|.|.+ +.|.+.+.|+|++..+....++.+...+....|.|.++..+|+|.|+|.+
T Consensus 8 ~~~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a---- 82 (95)
T 2k1m_A 8 VSAFSKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGGSDISASNKYGLATEGTRHTLTVREVGPADQGSYAVIA---- 82 (95)
T ss_dssp CCCCSBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSSSEECSSTTCEEEEETTEEEEEESSCCTTCCSEEEEEE----
T ss_pred CCeeEeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECCEECCCCCcEEEEEcCCEEEEEEcCCCcccCEEEEEEE----
Confidence 3566667788899999999999999 77889999999999988777888888888889999999999999999999
Q ss_pred ceeEEEEEEEEE
Q psy14060 213 GKAKCSANLVVE 224 (283)
Q Consensus 213 g~~~~~~~l~v~ 224 (283)
|.....+.|.|.
T Consensus 83 g~~~~~~~l~V~ 94 (95)
T 2k1m_A 83 GSSKVKFDLKVI 94 (95)
T ss_dssp TTEEEEEEEEEE
T ss_pred CCceEEEEEEEe
Confidence 556666777765
No 389
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.51 E-value=1.7e-13 Score=93.60 Aligned_cols=89 Identities=28% Similarity=0.520 Sum_probs=77.6
Q ss_pred CCCeEEecCCc-eeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 132 KPPVFTKKIQP-CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 132 ~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
.+|.|...+.+ ..+..|+.+.|.|.+. .|.+.+.|||++..+....++.+...+....|.|.++..+|+|.|+|.+
T Consensus 6 ~~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g~~i~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a-- 82 (100)
T 2yuv_A 6 SGAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNGQEIRPSTKYIFEHKGCQRILFINNCQMTDDSEYYVTA-- 82 (100)
T ss_dssp SSCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESSCBCCCBTTEEEEEETTEEEEEEEEECTTTCCEEEEEE--
T ss_pred CCCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECCEECCCCCCEEEEecCCEEEEEEcCCCcCcCEEEEEEE--
Confidence 47788877776 5788999999999998 6899999999999998877888888888889999999999999999999
Q ss_pred CCceeEEEEEEEEEe
Q psy14060 211 RGGKAKCSANLVVEE 225 (283)
Q Consensus 211 ~~g~~~~~~~l~v~~ 225 (283)
|.....+.|.|.+
T Consensus 83 --g~~~~~~~l~V~~ 95 (100)
T 2yuv_A 83 --GDEKCSTELFVRS 95 (100)
T ss_dssp --TTEEEEEEEEECC
T ss_pred --CCceEEEEEEEec
Confidence 6667778888875
No 390
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.51 E-value=3.6e-14 Score=98.11 Aligned_cols=91 Identities=20% Similarity=0.282 Sum_probs=78.4
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.|...+.+..+..|+.+.|.|.+.+.|.+ +.|+|++..+....++.+...+....|.|.++..+|+|.|+|.+.|.
T Consensus 7 ~~p~~~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 85 (106)
T 2dlt_A 7 GQLEVLQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNGVEVRPSKRITISHVGRFHKLVIDDVRPEDEGDYTFVPDGY 85 (106)
T ss_dssp CCCCEEECCCCEEEESSCCEECCCEESCSSCE-EEEEESSCBCCCCSSCEEEEETTEEEEEESSCCTTTCSCEEEEEETS
T ss_pred CCCEEecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCCEECcCCCCEEEEEeCCEEEEEECCCCcCCCEEEEEEEccC
Confidence 47888888899999999999999999987777 99999999988777888888888889999999999999999999997
Q ss_pred CceeEEEEEEEEEe
Q psy14060 212 GGKAKCSANLVVEE 225 (283)
Q Consensus 212 ~g~~~~~~~l~v~~ 225 (283)
.....+.|.|..
T Consensus 86 --~~~~~~~l~V~~ 97 (106)
T 2dlt_A 86 --ALSLSAKLNFLE 97 (106)
T ss_dssp --CCCCCBCEEEEC
T ss_pred --CceEEEEEEEEE
Confidence 444455666654
No 391
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.51 E-value=1.3e-13 Score=97.42 Aligned_cols=92 Identities=18% Similarity=0.247 Sum_probs=73.1
Q ss_pred CeEEecCCceeecCCCcEEEEEEEeee---cCCEEEEEeCCEec-C--CCCCeEEEEe--C----CEEEEEEcCCCCCCC
Q psy14060 134 PVFTKKIQPCRAFEQDQARFEVEFDGD---PLPTIKWFREDFPI-T--SSPDFQIHTF--S----TKSILIMRQVFMEDS 201 (283)
Q Consensus 134 p~~~~~~~~~~~~~g~~v~l~C~~~g~---p~~~~~W~k~~~~~-~--~~~~~~~~~~--~----~~~~l~i~~~~~~d~ 201 (283)
+.|+..+....+.+|+.++|.|.+.+. |.|.+.|||+.... . ...++.+... . ....|.|.++...|+
T Consensus 8 ~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~Da 87 (126)
T 2dav_A 8 ILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFERHSRVYTFEMQIIKAKDNFA 87 (126)
T ss_dssp CSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESSSCCHHHHTTSSEEEEEEEETTTTEEEEEEEECSCCTTSC
T ss_pred cEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCcCcccCCCCCceEEEccccccccccceEEEEEccCCcccC
Confidence 456777788899999999999999875 78999999974211 1 1234444321 1 146899999999999
Q ss_pred EEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 202 GVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 202 G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
|.|+|++.|..+.....+.|.|..
T Consensus 88 G~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 88 GNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EEEEEEEECSSCEEEECCEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEEe
Confidence 999999999999999999999986
No 392
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.51 E-value=1.1e-13 Score=108.59 Aligned_cols=131 Identities=9% Similarity=0.108 Sum_probs=89.7
Q ss_pred cCCceeecCCCcEEEEEEEeee--cCCEEEEEeCCE--e---c---C-------------CCCCeEEEEe--CCEEEEEE
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGD--PLPTIKWFREDF--P---I---T-------------SSPDFQIHTF--STKSILIM 193 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~~--~---~---~-------------~~~~~~~~~~--~~~~~l~i 193 (283)
.+....+.+|+++.|.|.+.+. +.+.+.|||... . + . ...++.+... ....+|.|
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 85 (221)
T 3m8o_H 6 ESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQM 85 (221)
T ss_dssp EESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEEE
T ss_pred ccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEEE
Confidence 3455778999999999999874 367999997421 1 0 0 1135555443 34568999
Q ss_pred cCCCCCCCEEEEEEEEeCC--ceeEEEEEEEEEeccCCCCCCCCCCeEE-ecCCceEEcCCCeEEEEEEEEe-eCC-C-e
Q psy14060 194 RQVFMEDSGVFAVIAENRG--GKAKCSANLVVEEKRQGGRGGVVPPSFL-TTISSAVINVGQLARFDAKISA-TKP-L-D 267 (283)
Q Consensus 194 ~~~~~~d~G~Y~C~a~n~~--g~~~~~~~l~v~~~~~~~~~~~~~p~~~-~~~~~~~v~~g~~v~L~C~~~g-~p~-~-~ 267 (283)
.++..+|+|.|+|.+.+.. ........|.|.... ..+|.+. ..+... .+|+.++|.|.+.+ .|. + .
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~~~~------~~~p~v~~~~~~~~--~~g~~v~L~C~~~~~~P~~~~~ 157 (221)
T 3m8o_H 86 NSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVSSAS------PTSPKVFPLSLCST--QPDGNVVIACLVQGFFPQEPLS 157 (221)
T ss_dssp CSCCGGGCEEEEEEEESCTTCCCBBCCEEEEECSCC------CBCCEEEEEECCSC--CCTTEEEEEEEEEEEBSSCSEE
T ss_pred CCCCHHHCEEEEEEEECCChhheECCCEEEEEecCC------CCCCeEEEecCccc--ccCCCEEEEEEEEeeECCCCEE
Confidence 9999999999999999863 122233456664210 1355555 233333 78999999999998 665 4 8
Q ss_pred eEEeeCCEEe
Q psy14060 268 VYWLKVSSLS 277 (283)
Q Consensus 268 v~W~~~g~~l 277 (283)
+.|+++|+.+
T Consensus 158 v~W~~~g~~~ 167 (221)
T 3m8o_H 158 VTWSESGQGV 167 (221)
T ss_dssp EEESCCSTTC
T ss_pred EEEEECCEEC
Confidence 9999999766
No 393
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.51 E-value=1e-13 Score=124.30 Aligned_cols=151 Identities=8% Similarity=0.043 Sum_probs=98.9
Q ss_pred eeeecCcEEEEEEE-ccCccce-EEeec------------------CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEe
Q psy14060 59 EIHTAKSQQVQKEK-KGDKEIV-RKITA------------------TETTEMEHKGKIQERVVDASELDDDGYYAITERK 118 (283)
Q Consensus 59 ~v~~g~~v~l~C~~-~g~~~i~-~~~~~------------------~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 118 (283)
.+.+|+.++|.|.+ .+.|... .|... ..+..+.. ..+|.|.+++.+|+|.|+|.+.|
T Consensus 377 ~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~L~i~~v~~~D~G~Y~C~~~n 453 (581)
T 3o3u_N 377 TARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLP---NGSLFLPAVGIQDEGIFRCQAMN 453 (581)
T ss_dssp EEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECT---TSCEEESSCCGGGCEEEEEEEEC
T ss_pred ceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcC---CceEEEeccccccCeEEEEEEEc
Confidence 36678899999998 6666322 22221 22333332 23799999999999999999999
Q ss_pred cceee--eeeccCCCC---CCeEEecCCceeecCCCc-EEEEEEEee-ecCCEEEEEeCCEecCCCC-CeEEEE---e--
Q psy14060 119 YYALS--DLSEQKPAK---PPVFTKKIQPCRAFEQDQ-ARFEVEFDG-DPLPTIKWFREDFPITSSP-DFQIHT---F-- 185 (283)
Q Consensus 119 ~~~~~--~~~~~~~~~---~p~~~~~~~~~~~~~g~~-v~l~C~~~g-~p~~~~~W~k~~~~~~~~~-~~~~~~---~-- 185 (283)
..+.. ....+.+.. +|.+.. ....+..+.. +.|.|.+.+ +|.|.++|++++..+.... .+.+.. .
T Consensus 454 ~~~~~~~~~~~l~V~~~~~~p~i~~--~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~~~~~~~~~~~~~~~ 531 (581)
T 3o3u_N 454 RNGKETKSNYRVRVYQIPGKPEIVD--SASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPNEKGVSVKEQTRRHP 531 (581)
T ss_dssp TTSCEEEEEEEEEEEBCCCCCEEES--CCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTTSTTEEEEEEEEECT
T ss_pred CCCceeEEEEEEEEEcCCCCCEEEc--CCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCCCCeEEEEeeeEEcC
Confidence 87743 223333322 343332 2223455544 567999988 5999999999999886532 332211 1
Q ss_pred C-----CEEEEEEcCCC-CCCCEEEEEEEEeCCce
Q psy14060 186 S-----TKSILIMRQVF-MEDSGVFAVIAENRGGK 214 (283)
Q Consensus 186 ~-----~~~~l~i~~~~-~~d~G~Y~C~a~n~~g~ 214 (283)
. ..++|.|..+. ..+.|.|+|.+.|..+.
T Consensus 532 ~~g~y~~~s~L~i~~~~~~d~~~~y~C~~~n~~~~ 566 (581)
T 3o3u_N 532 ETGLFTLQSELMVTPARGGDPRPTFSCSFSPGLPR 566 (581)
T ss_dssp TTCCEEEEEEEEECCCTTSCSCCCEEEEEECSSCS
T ss_pred CCceEEEEEEEEEEeccccCCCceEEEEEeccCCC
Confidence 1 13579999988 44588999999998643
No 394
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.51 E-value=3.6e-13 Score=94.13 Aligned_cols=94 Identities=20% Similarity=0.322 Sum_probs=80.0
Q ss_pred eccCCC-CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEE
Q psy14060 126 SEQKPA-KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVF 204 (283)
Q Consensus 126 ~~~~~~-~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y 204 (283)
..+.+. .||.+...+....+..|+.+.|.|.+.+. |.+.|+|++..+....++.+...+....|.|.++..+|+|.|
T Consensus 11 ~~l~V~~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (113)
T 2edh_A 11 AMLTVRALPIKFTEGLRNEEATEGATAVLRCELSKM--APVEWWKGHETLRDGDRHSLRQDGARCELQIRGLVAEDAGEY 88 (113)
T ss_dssp CCCCCCCSCCCEEECCCCCEECTTSCEEEEEEESSC--CCCEEEESSSBCCCSSSEEEEEETTEEEEEECSCCSTTCEEE
T ss_pred EEEEEEcCCCcccccCCceEEeCCCeEEEEEEECCC--CcEEEEECCEECCCCCcEEEEECCCEEEEEECCCChhhCEEE
Confidence 345555 35688888888899999999999999774 789999999999887888888888888999999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEEe
Q psy14060 205 AVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 205 ~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+|.+ +.....+.|.|..
T Consensus 89 ~C~a----~~~~~~~~l~V~~ 105 (113)
T 2edh_A 89 LCMC----GKERTSAMLTVRA 105 (113)
T ss_dssp EEEE----TTEEEEEEEEECC
T ss_pred EEEe----CCCCEEEEEEEeC
Confidence 9999 6677778888875
No 395
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.51 E-value=8.7e-14 Score=95.62 Aligned_cols=89 Identities=20% Similarity=0.388 Sum_probs=78.3
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.||.+...+....+..|+.+.|.|.+.+ |.+.+.|+|++..+....++.+...+....|.|.++..+|+|.|+|.+.|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n- 84 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDRKAIRKSQKYDVVCEGTMAMLVIRGASLKDAGEYTCEVEA- 84 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESSCBCCCSSSEEEEEETTEEEEEESSCCTTTCSEEEEECSS-
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECCEEccCCCCEEEEECCCEEEEEECCCCcccCEEEEEEEcc-
Confidence 4778888888899999999999999998 88899999999999887788888888888999999999999999999988
Q ss_pred CceeEEEEEEEEEe
Q psy14060 212 GGKAKCSANLVVEE 225 (283)
Q Consensus 212 ~g~~~~~~~l~v~~ 225 (283)
....+.|.|..
T Consensus 85 ---~~~~~~l~V~~ 95 (103)
T 2edf_A 85 ---SKSTASLHVEE 95 (103)
T ss_dssp ---CEEEEEEEECC
T ss_pred ---CCcEEEEEEeC
Confidence 35667777765
No 396
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.50 E-value=1.7e-13 Score=94.23 Aligned_cols=80 Identities=18% Similarity=0.266 Sum_probs=65.9
Q ss_pred cCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEE--EEeC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEE
Q psy14060 146 FEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQI--HTFS---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSAN 220 (283)
Q Consensus 146 ~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~--~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 220 (283)
..+..+.|.|.+.|.|.|.++|+|++..+....+... ...+ ....|.|.++..+|+|.|+|.|.|..|.....+.
T Consensus 14 ~~~~~~~~~c~v~G~P~P~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~A~N~~G~~~~~~~ 93 (103)
T 1wwb_X 14 TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEYHGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQIS 93 (103)
T ss_dssp CCCCEEEEEEEEECSSCCEEEEEETTEEECCCSSEEEEEEEECSSEEEEEEEEESCCGGGCEEEEEEEECSSCEEEEEEE
T ss_pred eECcEEEEEEEEEEeCCCEEEEEECCEECCCCCcEeEEEEecCCcEEEEEEEECCCCcccCEEEEEEEEeCCCcEeEEEE
Confidence 4577899999999999999999999999887655322 2211 1345999999999999999999999999998888
Q ss_pred EEEEe
Q psy14060 221 LVVEE 225 (283)
Q Consensus 221 l~v~~ 225 (283)
|.|..
T Consensus 94 l~V~~ 98 (103)
T 1wwb_X 94 AHFMG 98 (103)
T ss_dssp ECCSC
T ss_pred EEECC
Confidence 88764
No 397
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.50 E-value=2.7e-14 Score=115.28 Aligned_cols=125 Identities=14% Similarity=0.205 Sum_probs=85.1
Q ss_pred CeEEecCCceeecCCCcEEEEEEEe---eecCCEEEEEeCCEecCCC------------------CCeEEEE--eCCEEE
Q psy14060 134 PVFTKKIQPCRAFEQDQARFEVEFD---GDPLPTIKWFREDFPITSS------------------PDFQIHT--FSTKSI 190 (283)
Q Consensus 134 p~~~~~~~~~~~~~g~~v~l~C~~~---g~p~~~~~W~k~~~~~~~~------------------~~~~~~~--~~~~~~ 190 (283)
+.+...+....+.+|+.+.|.|.+. +.+.+.+.|++++...... .++.+.. .....+
T Consensus 6 ~~v~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~ 85 (268)
T 3mj6_A 6 PGLTVSSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGS 85 (268)
T ss_dssp ------CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCC
T ss_pred cccccCCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEE
Confidence 3445556678899999999999997 6677889999965432211 1222110 012256
Q ss_pred EEEcCCCCCCCEEEEEEEEeCCceeEE--EEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEE---EeeCC
Q psy14060 191 LIMRQVFMEDSGVFAVIAENRGGKAKC--SANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKI---SATKP 265 (283)
Q Consensus 191 l~i~~~~~~d~G~Y~C~a~n~~g~~~~--~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~---~g~p~ 265 (283)
|.|.++..+|+|.|+|.+.|..+.... ...|.|.. .. +....+.+|+.+.|.|.+ .+.|.
T Consensus 86 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~---------~~------p~~~~v~~G~~v~L~C~~~~~~~~p~ 150 (268)
T 3mj6_A 86 LLLQDVQKADEGIYTCEIRLKNESMVMKKPVELWVLP---------EE------PRDLRVRVGDTTQMRCSIQSTEEKRV 150 (268)
T ss_dssp EEECSCCGGGCEEEEEEEEETTCCCEEEEEEEEEEEC---------CC------CSEEEEETTCCEEECCBCEESSSSCC
T ss_pred EEECCCCHhHCEEEEEEEEecCCcceEEEEEEEEEec---------cC------CCccccccCCcEEEEEEecCCCCCCc
Confidence 999999999999999999997655433 34444442 12 235678899999999999 45688
Q ss_pred CeeEEeeC
Q psy14060 266 LDVYWLKV 273 (283)
Q Consensus 266 ~~v~W~~~ 273 (283)
+.+.|+++
T Consensus 151 ~~v~W~~~ 158 (268)
T 3mj6_A 151 TKVNWMFS 158 (268)
T ss_dssp CEEEEEEE
T ss_pred cceEEEec
Confidence 89999993
No 398
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.50 E-value=3.3e-14 Score=114.06 Aligned_cols=137 Identities=14% Similarity=0.141 Sum_probs=89.9
Q ss_pred ecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--Ee---c---CCC---------C-CeEEEEeCCEEEEEEcCCCCC
Q psy14060 138 KKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FP---I---TSS---------P-DFQIHTFSTKSILIMRQVFME 199 (283)
Q Consensus 138 ~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~---~---~~~---------~-~~~~~~~~~~~~l~i~~~~~~ 199 (283)
..+....+..|+++.|.|.+.+.+.+.+.|||.. .. + ... . ++.+....... |.|.++..+
T Consensus 6 q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~-L~I~~v~~~ 84 (253)
T 3to4_D 6 QNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVTDTE-LRLQVANMS 84 (253)
T ss_dssp EECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECCSSSC-CEEEEESCS
T ss_pred eCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeCCCCe-EEEccCChh
Confidence 3456678999999999999888788899999831 11 0 000 0 23232222222 999999999
Q ss_pred CCEEEEEEEEeCCc------eeEEEEEEEEEeccCCCCCCCCCCeEEec-CCceEEcCCCeEEEEEEEEe-eCCC-eeEE
Q psy14060 200 DSGVFAVIAENRGG------KAKCSANLVVEEKRQGGRGGVVPPSFLTT-ISSAVINVGQLARFDAKISA-TKPL-DVYW 270 (283)
Q Consensus 200 d~G~Y~C~a~n~~g------~~~~~~~l~v~~~~~~~~~~~~~p~~~~~-~~~~~v~~g~~v~L~C~~~g-~p~~-~v~W 270 (283)
|+|.|+|.+.+..+ .......+.|.... ....+|.+... +....+..|+.++|.|.+.| .|.+ .++|
T Consensus 85 DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~~~----~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W 160 (253)
T 3to4_D 85 QGRTLYCTSSADHWTNTGQLYFGEGSKLTVLEDL----KNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSW 160 (253)
T ss_dssp SCEEEEEEEECSCCSTTCCEEECCCEEEEEESCS----TTCBCCEEEEEECCHHHHHHHSEEEEEEEEEEEBSSCEEEEE
T ss_pred hCeEEEEEEecCCCCcccceEECCCEEEEEecCC----CCCCCCeEEEeCCChhhcccCCceEEEEEEceEECCcEEEEE
Confidence 99999999987643 11122456665310 00134555432 23333446789999999998 5666 8999
Q ss_pred eeCCEEecC
Q psy14060 271 LKVSSLSDV 279 (283)
Q Consensus 271 ~~~g~~l~~ 279 (283)
++||+.+..
T Consensus 161 ~k~g~~l~~ 169 (253)
T 3to4_D 161 WVNGKEVHS 169 (253)
T ss_dssp EETTEEECT
T ss_pred EECCEECCC
Confidence 999999864
No 399
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=5.7e-14 Score=96.79 Aligned_cols=89 Identities=22% Similarity=0.310 Sum_probs=77.0
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecC-CEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPL-PTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~-~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
++.|...+.+..+.+|+.+.|.|.+.+.|. +.+.|||++..+....++.+...+..++|.|.++..+|+|.|+|.+
T Consensus 8 p~~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a--- 84 (104)
T 2eny_A 8 HVGITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSV--- 84 (104)
T ss_dssp CCCCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEE---
T ss_pred CCEEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEE---
Confidence 556777788899999999999999998764 4799999999998877888888888889999999999999999988
Q ss_pred CceeEEEEEEEEEe
Q psy14060 212 GGKAKCSANLVVEE 225 (283)
Q Consensus 212 ~g~~~~~~~l~v~~ 225 (283)
+....++.|.|..
T Consensus 85 -~~~~~~a~L~V~~ 97 (104)
T 2eny_A 85 -RGLTSKASLIVRE 97 (104)
T ss_dssp -TTEEEEECEEEEC
T ss_pred -CCeeEEEEEEEeC
Confidence 3456778888885
No 400
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.50 E-value=8.2e-14 Score=105.91 Aligned_cols=119 Identities=12% Similarity=0.120 Sum_probs=85.1
Q ss_pred CceeecCCCcEEEEEEEee-ecCCEEEEEeC-CEecC------------CC--CCeEEEEeCCEEEEEEcCCCCCCCEEE
Q psy14060 141 QPCRAFEQDQARFEVEFDG-DPLPTIKWFRE-DFPIT------------SS--PDFQIHTFSTKSILIMRQVFMEDSGVF 204 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g-~p~~~~~W~k~-~~~~~------------~~--~~~~~~~~~~~~~l~i~~~~~~d~G~Y 204 (283)
....+.+|++++|.|.+.+ .+.+.+.|+|. +..+. .. .++.+ .....+|.|.+++.+|+|.|
T Consensus 7 ~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l--~~~~~sL~I~~v~~~D~G~Y 84 (180)
T 2dru_A 7 PNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDL--DKTNGALRIYNVSKEDRGDY 84 (180)
T ss_dssp CEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEE--CTTTCCEEECSCCGGGCEEE
T ss_pred ceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEE--eCCCccEEEcCCCHHHCeEE
Confidence 4567889999999998854 34689999994 32211 11 23333 22344699999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEE-EeeCCCeeEEeeCCEEec
Q psy14060 205 AVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKI-SATKPLDVYWLKVSSLSD 278 (283)
Q Consensus 205 ~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~-~g~p~~~v~W~~~g~~l~ 278 (283)
.|.+.+.. .....+.|.|.... ..|.+.. .+..+.|.|.+ .| |.|.|.|+++|..+.
T Consensus 85 ~C~v~~~~-~~~~~~~L~V~~~~-------~~P~i~~--------~~~~v~L~C~~~~g-p~p~i~W~~~~~~l~ 142 (180)
T 2dru_A 85 YMRMLHET-EDQWKITMEVYEMV-------SKPMIYW--------ECSNATLTCEVLEG-TDVELKLYQGKEHLR 142 (180)
T ss_dssp EEEEESSS-EEEEEEEEEEECCC-------CCCEEEE--------EGGGTEEEEECSSC-TTCEEEEEETTEEEE
T ss_pred EEEEEcCC-eEEEEEEEEEECCC-------CCCEEEe--------cCCCEEEEEEeCCC-CCCEEEEEECCeECc
Confidence 99998776 55666778877521 2344332 34669999999 66 999999999998874
No 401
>1sy6_A T-cell surface glycoprotein CD3 gamma/epsilon chain; CD3 epsilon, OKT3 FAB, signaling protein/antibiotic complex; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 2atp_E*
Probab=99.50 E-value=3.1e-14 Score=110.51 Aligned_cols=119 Identities=12% Similarity=0.116 Sum_probs=76.2
Q ss_pred ecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 145 AFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 145 ~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
+..|++++|.|.+ |.+.+.|+|++..+... ......|.|.++..+|+|.|.|.+.+... . .+.+.+.
T Consensus 15 ~~~G~~v~L~C~~---p~~~i~W~k~g~~l~~~-------~~~~~~L~i~~v~~~DsG~Y~C~~~~~~s-~--~~~v~v~ 81 (204)
T 1sy6_A 15 YQEDGSVLLTCDA---EAKNITWFKDGKMIGFL-------TEDKKKWNLGSNAKDPRGMYQCKGSQNKS-K--PLQVYYR 81 (204)
T ss_dssp CCSSSEEEEEECS---CSSEEEEEETTEEEEEE-------ESSCCCEEEEEGGGCCEEEEEEESSSSCC-C--CEEEEEE
T ss_pred ecCCCeEEEEEcC---CCCEEEEEECCEECCCC-------CCCCCeEEeCCCCcCCCEEEEEEecCCCC-e--eEEEEEE
Confidence 4579999999998 78999999999876431 11234599999999999999999755322 1 1333332
Q ss_pred e------ccCC--------------C-CCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeEEeeCCEEecC
Q psy14060 225 E------KRQG--------------G-RGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLKVSSLSDV 279 (283)
Q Consensus 225 ~------~~~~--------------~-~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~W~~~g~~l~~ 279 (283)
. .... + .....++.+...+ .....+|+.++|.|. +.|.|.+.|++||..+..
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~~v~~~G~~v~L~C~--g~p~p~i~W~k~~~~l~~ 154 (204)
T 1sy6_A 82 MGSADDAKKDAAKKDDAKKDDAKKDGSDGNEEMGGITQTP-YKVSISGTTVILTCP--QYPGSEILWQHNDKNIGG 154 (204)
T ss_dssp C------------------------------------CCC-CEEEEETTEEEEECS--CCCSSCEEEEETTEEESC
T ss_pred EeccccccccccccccccccccccccccccccccceecCC-ceeeecCCcEEEEcC--CCCCCceEEEECCEECCC
Confidence 0 0000 0 0000022222222 222338999999998 789999999999998864
No 402
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.50 E-value=1.4e-13 Score=94.61 Aligned_cols=88 Identities=24% Similarity=0.425 Sum_probs=75.2
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC--CeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP--DFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~--~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
|+.|...+....+..|+.+.|.|.+.+ |.+.+.|+|++..+.... ++.+...+....|.|.++..+|+|.|+|.+.|
T Consensus 7 p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n 85 (103)
T 1x44_A 7 GIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILIIEGATKADAAEYSVMTTG 85 (103)
T ss_dssp SCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEETTEECCCSTTCSEEEEEETTEEEEEEEEECTTTCSEEEEEETT
T ss_pred CceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEECCEECCCCCceEEEEEEcCCEEEEEECCCCcccCEEEEEEECC
Confidence 334666778889999999999999988 779999999999998766 66888877888999999999999999999977
Q ss_pred CCceeEEEEEEEEEe
Q psy14060 211 RGGKAKCSANLVVEE 225 (283)
Q Consensus 211 ~~g~~~~~~~l~v~~ 225 (283)
....+.|.|..
T Consensus 86 ----~~~~~~l~V~~ 96 (103)
T 1x44_A 86 ----GQSSAKLSVDL 96 (103)
T ss_dssp ----EEEEEEEEEEC
T ss_pred ----CcEEEEEEEeC
Confidence 46667888875
No 403
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.50 E-value=3.6e-13 Score=94.09 Aligned_cols=91 Identities=18% Similarity=0.295 Sum_probs=74.5
Q ss_pred CCCCCeEEecCCc---eeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEE
Q psy14060 130 PAKPPVFTKKIQP---CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAV 206 (283)
Q Consensus 130 ~~~~p~~~~~~~~---~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C 206 (283)
+..+|.+...+.. ..+..|+.+.|.|.+. .|.+.+.|+|++..+....++.+...+....|.|.++..+|+|.|+|
T Consensus 7 v~~pp~~~~~p~~~~~~~~~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 85 (113)
T 2cpc_A 7 GTDVSSWIVYPSGKVYVAAVRLERVVLTCELC-RPWAEVRWTKDGEEVVESPALLLQKEDTVRRLVLPAVQLEDSGEYLC 85 (113)
T ss_dssp CCSCSCSEEESCSCEEEEEETTCCEEEEEEES-CTTCCCEEEETTEECCCBTTBEEEECSSEEEEEESSCCTTTCEEEEE
T ss_pred cccCCcEEEccCCceeEEEEcCCeEEEEEEec-CCCCeEEEEECCEECccCCCEEEEECCCEEEEEECCCCcccCEEEEE
Confidence 3446655555544 5788999999999996 68899999999999987778888777777889999999999999999
Q ss_pred EEEeCCceeEEEEEEEEEe
Q psy14060 207 IAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 207 ~a~n~~g~~~~~~~l~v~~ 225 (283)
.+.| ....+.|.|..
T Consensus 86 ~a~n----~~~~~~l~V~~ 100 (113)
T 2cpc_A 86 EIDD----ESASFTVTVTE 100 (113)
T ss_dssp ESSS----CEEEEEEEEEC
T ss_pred EEec----CcEEEEEEEec
Confidence 9988 45667788875
No 404
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.50 E-value=2.5e-13 Score=95.91 Aligned_cols=79 Identities=18% Similarity=0.292 Sum_probs=67.1
Q ss_pred CCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeC-------CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE
Q psy14060 147 EQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS-------TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 147 ~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~-------~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 219 (283)
.+..+.|.|.+.|.|.|.++|+|+|..+....+..+.... ....|.|.++...|+|.|+|.|.|..|.....+
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~knG~~l~~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N~~G~~~~t~ 93 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAANPFGQASASI 93 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEETTEECCCCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEECCEECCCCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEECCCeEEEEE
Confidence 5678999999999999999999999999877665443221 245799999999999999999999999998888
Q ss_pred EEEEEe
Q psy14060 220 NLVVEE 225 (283)
Q Consensus 220 ~l~v~~ 225 (283)
.|.|..
T Consensus 94 ~l~v~~ 99 (126)
T 1he7_A 94 MAAFMD 99 (126)
T ss_dssp EECCCS
T ss_pred EEEEEc
Confidence 887775
No 405
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.49 E-value=1.1e-14 Score=114.29 Aligned_cols=124 Identities=14% Similarity=0.139 Sum_probs=88.1
Q ss_pred CceeecCCCcEEEEEEEee-ecCC----EEEEEeCCEecCC-------------CCCeEEEE-----eCCEEEEEEcCCC
Q psy14060 141 QPCRAFEQDQARFEVEFDG-DPLP----TIKWFREDFPITS-------------SPDFQIHT-----FSTKSILIMRQVF 197 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g-~p~~----~~~W~k~~~~~~~-------------~~~~~~~~-----~~~~~~l~i~~~~ 197 (283)
....+..|+++.|.|.+.+ .+.+ .+.|+|++..... ..++.+.. .....+|.|.++.
T Consensus 7 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~v~ 86 (221)
T 3eow_R 7 TQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFGLR 86 (221)
T ss_dssp CCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCCSS
T ss_pred CcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEccCC
Confidence 4456788999999999954 3433 4999998642211 22333332 1134579999999
Q ss_pred CCCCEEEEEEEEeCC-ceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeE-EEEEEEE-eeCCCeeEEeeCC
Q psy14060 198 MEDSGVFAVIAENRG-GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLA-RFDAKIS-ATKPLDVYWLKVS 274 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~-g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v-~L~C~~~-g~p~~~v~W~~~g 274 (283)
.+|+|.|+|.+.+.. +.....+.|.|.. +|.+...+.... ..|+.+ .|.|.+. +.|.|.++|++++
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~----------~P~~~~~~~~~~-~~g~~~~~l~C~~~~g~P~p~v~W~k~~ 155 (221)
T 3eow_R 87 VEDEGSYTCLFVTFPQGSRSVDIWLRVLA----------KPQNTAEVQKVQ-LTGEPVPMARCVSTGGRPPAQITWHSDL 155 (221)
T ss_dssp CCCCSCBEEEEEESSSCSCEEECCCCCCC----------CCEEEEEEECCC-CCSSSCCEEEEEEESCSSCCCEEEECSS
T ss_pred hHHCeEEEEEEEeCCCCceEEEEEEEEEE----------CCCceeecCCcc-cCCceEEEEEEECCCccCCCeeEEEeCC
Confidence 999999999999976 6666677777763 566654333222 678888 5999988 8899999999874
Q ss_pred E
Q psy14060 275 S 275 (283)
Q Consensus 275 ~ 275 (283)
.
T Consensus 156 ~ 156 (221)
T 3eow_R 156 G 156 (221)
T ss_dssp S
T ss_pred C
Confidence 3
No 406
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.49 E-value=1.6e-13 Score=95.10 Aligned_cols=89 Identities=18% Similarity=0.351 Sum_probs=75.9
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
..+|.|...+....+..|+.+.|.|.+.+. |.+.|+|++..+....++.+...+..+.|.|.++..+|+|.|+|.+.
T Consensus 6 ~~pp~~~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~- 82 (108)
T 2dm7_A 6 SGPARFTQDLKTKEASEGATATLQCELSKV--APVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCG- 82 (108)
T ss_dssp CCCCCBCSCCBCCEEETTSCEEEEEEBSSS--CCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEET-
T ss_pred CCCCeeeecCCcEEEeCCCcEEEEEEeCCC--CeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEc-
Confidence 357777777788899999999999999764 78999999999887778888888888899999999999999999993
Q ss_pred CCceeEEEEEEEEEe
Q psy14060 211 RGGKAKCSANLVVEE 225 (283)
Q Consensus 211 ~~g~~~~~~~l~v~~ 225 (283)
.....+.|.|..
T Consensus 83 ---n~~~~~~l~V~~ 94 (108)
T 2dm7_A 83 ---QERTSATLTVRA 94 (108)
T ss_dssp ---TEEEEEECEEEC
T ss_pred ---CCEEEEEEEEec
Confidence 356677888876
No 407
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.49 E-value=3.7e-13 Score=93.38 Aligned_cols=89 Identities=18% Similarity=0.320 Sum_probs=76.1
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC----------CeEEEEeCCEEEEEEcCCCCCCC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP----------DFQIHTFSTKSILIMRQVFMEDS 201 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~----------~~~~~~~~~~~~l~i~~~~~~d~ 201 (283)
.+|.|...+.+..+.+|+.+.|.|.+++ .+.+.|||||..+..+. ++.+...+..+.|.|.++..+|+
T Consensus 7 p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG~~l~~~~~~~~~~~~~~r~~i~~~g~~~~L~I~~v~~~D~ 84 (112)
T 2e6q_A 7 GTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNGEELKSNEPEGQVEPGALRYRIEQKGLQHRLILHAVKHQDS 84 (112)
T ss_dssp SCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESSCBCCSSCCCTTSCTTSCEEEECCBTTEEEEEEESCCSTTC
T ss_pred CCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECCEECccCcccccccccccEEEEEeCCcEEEEEECCCCHHHC
Confidence 4677888999999999999999999997 78899999999998776 77777777788999999999999
Q ss_pred EEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 202 GVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 202 G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
|.|+|... +...+++.|.|..
T Consensus 85 G~Y~~~~~---~~~~ssA~L~V~~ 105 (112)
T 2e6q_A 85 GALVGFSC---PGVQDSAALTIQE 105 (112)
T ss_dssp SEEEEEEE---TTEEEEEEEEEEC
T ss_pred ccEEEEEE---CCeeEEEEEEEeC
Confidence 99977443 3345688999986
No 408
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.49 E-value=1.7e-13 Score=109.79 Aligned_cols=139 Identities=15% Similarity=0.147 Sum_probs=92.9
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--E--e-cC------------CCCCeEEEEe-CCEEEEEEcCCC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--F--P-IT------------SSPDFQIHTF-STKSILIMRQVF 197 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~--~-~~------------~~~~~~~~~~-~~~~~l~i~~~~ 197 (283)
+...+....+..|+++.|.|.+.. +.+.+.|||+. . . +. ...++.+... .....|.|.++.
T Consensus 6 v~q~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~ 84 (252)
T 1oga_E 6 ITQSPKYLFRKEGQNVTLSCEQNL-NHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQ 84 (252)
T ss_dssp EECSCSEEEEETTCCEEECCEECS-CCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCC
T ss_pred ceEcCCeEEEcCCCcEEEEEEeCC-CCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCC
Confidence 444566788999999999999854 67899999853 1 1 10 1134444321 234579999999
Q ss_pred CCCCEEEEEEEEeCC---ceeEEEEEEEEEeccCCCCCCCCCCeEEec-CCceEEcCCCeEEEEEEEEee-CCC-eeEEe
Q psy14060 198 MEDSGVFAVIAENRG---GKAKCSANLVVEEKRQGGRGGVVPPSFLTT-ISSAVINVGQLARFDAKISAT-KPL-DVYWL 271 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~---g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~-~~~~~v~~g~~v~L~C~~~g~-p~~-~v~W~ 271 (283)
.+|+|.|.|.+.+.. ........|.|..... ...+|.+... +....+..|+.++|.|.+.|. |.+ .+.|+
T Consensus 85 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~~~~----~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~ 160 (252)
T 1oga_E 85 KNPTAFYLCASSSRSSYEQYFGPGTRLTVTEDLK----NVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW 160 (252)
T ss_dssp SCCCEEEEEEEESSTTSCCEECCCEEEEEESCGG----GCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEE
T ss_pred hhhCEEEEEEEecCCccceeECCCEEEEEecccC----CCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEE
Confidence 999999999999862 1111223566653100 0135666543 333445679999999999986 654 89999
Q ss_pred eCCEEecC
Q psy14060 272 KVSSLSDV 279 (283)
Q Consensus 272 ~~g~~l~~ 279 (283)
+||+.+..
T Consensus 161 ~~g~~l~~ 168 (252)
T 1oga_E 161 VNGKEVHS 168 (252)
T ss_dssp ETTEEECS
T ss_pred ECCEECCC
Confidence 99998764
No 409
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.49 E-value=1e-13 Score=124.30 Aligned_cols=126 Identities=15% Similarity=0.132 Sum_probs=92.6
Q ss_pred eeecCCCcEEEEEEE-eeecCCEEEEEeCCEecCC------------CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 143 CRAFEQDQARFEVEF-DGDPLPTIKWFREDFPITS------------SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 143 ~~~~~g~~v~l~C~~-~g~p~~~~~W~k~~~~~~~------------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
..+..|++++|.|.+ .+.|.+.++|+|++..+.. ..+..+.. ..+|.|.+++.+|+|.|+|.+.
T Consensus 376 ~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~~---~~~L~i~~v~~~D~G~Y~C~~~ 452 (581)
T 3o3u_N 376 ITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVLP---NGSLFLPAVGIQDEGIFRCQAM 452 (581)
T ss_dssp EEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEECT---TSCEEESSCCGGGCEEEEEEEE
T ss_pred cceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEcC---CceEEEeccccccCeEEEEEEE
Confidence 567899999999999 7778899999998653211 11222221 1269999999999999999999
Q ss_pred eCCcee-EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCe-EEEEEEEEe-eCCCeeEEeeCCEEecCC
Q psy14060 210 NRGGKA-KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQL-ARFDAKISA-TKPLDVYWLKVSSLSDVK 280 (283)
Q Consensus 210 n~~g~~-~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~-v~L~C~~~g-~p~~~v~W~~~g~~l~~~ 280 (283)
|..+.. .....|.|.... ..|.+.. ....+..|.. +.|.|.+.+ +|.|.|+|++||++|...
T Consensus 453 n~~~~~~~~~~~l~V~~~~-------~~p~i~~--~~~~~~~~~~~~~l~C~~~~~~P~~~i~W~~~g~~l~~~ 517 (581)
T 3o3u_N 453 NRNGKETKSNYRVRVYQIP-------GKPEIVD--SASELTAGVPNKVGTCVSEGSYPAGTLSWHLDGKPLVPN 517 (581)
T ss_dssp CTTSCEEEEEEEEEEEBCC-------CCCEEES--CCSEECTTSCEEEEEEEEEEEBSCCEEEEEETTEECCTT
T ss_pred cCCCceeEEEEEEEEEcCC-------CCCEEEc--CCcccccCCceeEEEEECCCCCCCCeEEEEECCEECCCC
Confidence 998886 677888887631 2344433 2233555555 567999998 599999999999998753
No 410
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.49 E-value=7.3e-14 Score=95.40 Aligned_cols=83 Identities=20% Similarity=0.376 Sum_probs=66.6
Q ss_pred CceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCe-EEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE
Q psy14060 141 QPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDF-QIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~-~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 219 (283)
....+..|+.+.|.|.+.|.|.+.+.|++++..+....+. ..........|.|.++..+|+|.|+|.+.|..|.....+
T Consensus 16 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~~~~~ 95 (100)
T 3caf_A 16 RLHAVPAANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWSLIMESVVPSDKGNYTCVVENEYGSINHTY 95 (100)
T ss_dssp CEEEECTTCCEEEECCEEEESCCEEEEEETTEECCGGGSTTCCEEEGGGTEEEECSCCGGGCEEEEEEEEETTEEEEEEE
T ss_pred cEEEecCCCEEEEEEEccccCCCEEEEEECCEEcccccccccEEEecCeEEEEEccCCcCCCEEEEEEEEeCCCEEEEEE
Confidence 3467889999999999999999999999999988654321 111222334799999999999999999999999988777
Q ss_pred EEEE
Q psy14060 220 NLVV 223 (283)
Q Consensus 220 ~l~v 223 (283)
.|.|
T Consensus 96 ~l~V 99 (100)
T 3caf_A 96 HLDV 99 (100)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7765
No 411
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.48 E-value=1.8e-14 Score=113.03 Aligned_cols=127 Identities=15% Similarity=0.231 Sum_probs=84.6
Q ss_pred ceeecCCCcEEEEEEEeeecC-----CEEEEEeCCEecC-------------CCCCeEEEE---eCCEEEEEEcCCCCCC
Q psy14060 142 PCRAFEQDQARFEVEFDGDPL-----PTIKWFREDFPIT-------------SSPDFQIHT---FSTKSILIMRQVFMED 200 (283)
Q Consensus 142 ~~~~~~g~~v~l~C~~~g~p~-----~~~~W~k~~~~~~-------------~~~~~~~~~---~~~~~~l~i~~~~~~d 200 (283)
.+.+..|+.+.|.|.+.+.|. +.+.|++++.... ...++.+.. .....+|.|.++..+|
T Consensus 4 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~D 83 (222)
T 4i0k_A 4 PVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVTD 83 (222)
T ss_dssp CCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGGG
T ss_pred CEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCccccc
Confidence 456789999999999988654 6899999864320 011222111 0014569999999999
Q ss_pred CEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEE-EeeCCCeeEEee-CCEEe
Q psy14060 201 SGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKI-SATKPLDVYWLK-VSSLS 277 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~-~g~p~~~v~W~~-~g~~l 277 (283)
+|.|+|.+.+.. .......|.|.... .+|.+...+ ...+..|+.+.|.|.+ .+.|.|.+.|++ +|..+
T Consensus 84 ~G~Y~C~~~~~~-~~~~~~~l~V~~~~-------~~p~i~~~~-~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~~~~ 153 (222)
T 4i0k_A 84 EGSYTCFVSIQD-FDSAAVSLQVAAPY-------SKPSMTLEP-NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQGVPL 153 (222)
T ss_dssp CSCEEEEEEECC-CCCCCCCCCCCBCC-------CCCEEECCC------CCSEEEEEEEEEEEBSCCEEEEECTTSCBC
T ss_pred CEEEEEEEEeCC-CceEEEEEEEEcCC-------CCCcEEeCC-CceecCCceEEEEEecccccCCCeEEEEcCCCccC
Confidence 999999999863 33334455554321 235555433 4467899999999999 889999999999 55544
No 412
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.48 E-value=3.4e-14 Score=99.77 Aligned_cols=95 Identities=21% Similarity=0.310 Sum_probs=77.2
Q ss_pred ccCCCCCC-eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEE-EeCCEEEEEEcCCCCCCCEEE
Q psy14060 127 EQKPAKPP-VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIH-TFSTKSILIMRQVFMEDSGVF 204 (283)
Q Consensus 127 ~~~~~~~p-~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y 204 (283)
.+.+..+| .+...+.+..+.+|+.+.|.|.+.+.|.|.+.|+|++..+....++.+. ..+..+.|.|.++..+|+|.|
T Consensus 6 ~l~V~~~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 85 (115)
T 2cr6_A 6 SGLVQGRRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDKTPLHANELNEIDAQPGGYHVLTLRQLALKDSGTI 85 (115)
T ss_dssp CCCCCSSCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESSCEECCSSSCCBCCBTTTBCCBEECSCCTTTCEEE
T ss_pred EEEEcCCCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECCEECCCCCcEEEEEcCCCEEEEEEcCCChhhCEEE
Confidence 34454444 6777888899999999999999999899999999999988776665554 234556799999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEEe
Q psy14060 205 AVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 205 ~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+|.+ |.....+.|.|..
T Consensus 86 ~C~~----g~~~~~~~L~V~~ 102 (115)
T 2cr6_A 86 YFEA----GDQRASAALRVTE 102 (115)
T ss_dssp EEEE----TTEECCEEEEEEC
T ss_pred EEEE----CCeeEEEEEEEEC
Confidence 9994 6667778888885
No 413
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.48 E-value=1.8e-13 Score=94.14 Aligned_cols=89 Identities=18% Similarity=0.277 Sum_probs=74.7
Q ss_pred CCCeEEecCCc---eeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEE
Q psy14060 132 KPPVFTKKIQP---CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 132 ~~p~~~~~~~~---~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 208 (283)
.+|.+...+.. ..+..|+.+.|.|.+.+.|.+ +.|+|++..+....++.+...+....|.|.++..+|+|.|+|.+
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a 84 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDGQKVEESELLVVKMDGRKHRLILPEAKVQDSGEFECRT 84 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETTEECCCBTTBEEEEETTEEEEEESSCCTTTCEEEEEEC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCCEECCCCCCEEEEeCCCEEEEEECCCChhhCEEEEEEE
Confidence 35656655555 688999999999999998888 99999999998777888887788889999999999999999999
Q ss_pred EeCCceeEEEEEEEEEe
Q psy14060 209 ENRGGKAKCSANLVVEE 225 (283)
Q Consensus 209 ~n~~g~~~~~~~l~v~~ 225 (283)
.|..+ .+.|.|..
T Consensus 85 ~n~~~----~~~l~V~~ 97 (104)
T 2e6p_A 85 EGVSA----FFGVTVQD 97 (104)
T ss_dssp SSCCC----CEEEEEEC
T ss_pred CCceE----EEEEEEcC
Confidence 88743 46666764
No 414
>2w59_A IGY FCU3-4; immunoglobulin, avian, immune system; HET: NAG MAN; 1.75A {Gallus gallus}
Probab=99.48 E-value=9e-14 Score=110.02 Aligned_cols=154 Identities=12% Similarity=0.090 Sum_probs=97.4
Q ss_pred eeecCcEEEEEEEccC-c-c-ce-EEeecCCCE-------EEE-EcC---CEEEEEEccCCCCCCeEEEEEEEecceee-
Q psy14060 60 IHTAKSQQVQKEKKGD-K-E-IV-RKITATETT-------EME-HKG---KIQERVVDASELDDDGYYAITERKYYALS- 123 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~-~-~-i~-~~~~~~~~~-------~~~-~~~---~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~- 123 (283)
+.+|+.++|.|.+.|. | + +. .|...+... ... .++ ....|.|.++..+|+|.|+|.+.|..+..
T Consensus 25 v~~G~~v~L~C~~~g~~P~~p~~v~W~~~g~~~~~~~~~~~~~~~~g~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~~ 104 (231)
T 2w59_A 25 LYISLDAKLRCLVVNLPSDSSLSVTWTREKSGNLRPDPMVLQEHFNGTYSASSAVPVSTQDWLSGERFTCTVQHEELPLP 104 (231)
T ss_dssp HHTSCCCEEEEEEEEESCCTTCEEEEECSSSSCCCCCCCEEEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTCSSC
T ss_pred cccCCceEEEEEEeCccCCCCeEEEEEcCCeeccccccccceECCCCcEEEEEEEEecchhccCCCEEEEEEEcCCCCCc
Confidence 4578899999999984 4 2 34 444332221 101 111 13469999999999999999999876531
Q ss_pred eeeccC----CCCCCeEEec-CCceeecCCCcEEEEEEEeee-c-CCEEEEEeCCEecCCCCCeE--EE----------E
Q psy14060 124 DLSEQK----PAKPPVFTKK-IQPCRAFEQDQARFEVEFDGD-P-LPTIKWFREDFPITSSPDFQ--IH----------T 184 (283)
Q Consensus 124 ~~~~~~----~~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~-p-~~~~~W~k~~~~~~~~~~~~--~~----------~ 184 (283)
....+. ...+|.+... +....+ .+..+.|.|.+.|. | .+.+.|+|+|..+....... .. .
T Consensus 105 ~~~~v~~~~~~~~~P~v~v~~~~~~~~-~~~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~~~~~~ 183 (231)
T 2w59_A 105 LSKSVYRNTGPTTPPLIYPFAPHPEEL-SLSRVTLSCLVRGFRPRDIEIRWLRDHRAVPATEFVTTAVLPEERTANGAGG 183 (231)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGG-GSSEEEEEEEEEEEBSSCCEEEEEETTEECCGGGCEECCCEECCTTSCC---
T ss_pred eEEEEecCCCCCcCCEEEEeCCCHHHh-ccCceEEEEEEEeccCCCcEEEEEECCEECCCcccccCccccCcccccccCC
Confidence 111222 1245655433 222222 35579999999985 4 37999999999886543111 11 1
Q ss_pred e-CC---EEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 185 F-ST---KSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 185 ~-~~---~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
+ +. .+.|.|......|.|.|+|.+.|....
T Consensus 184 d~gt~~~~s~L~i~~~~~~~~g~YtC~v~n~~l~ 217 (231)
T 2w59_A 184 DGDTFFVYSKMSVETAKWNGGTVFACMAVHEALP 217 (231)
T ss_dssp CCCCEEEEEEEEEEHHHHHTTCCEEEEEECTTST
T ss_pred CCCeEEEEEEEEEeHHHcCCCCcEEEEEEcCCCC
Confidence 1 12 245778777778899999999998654
No 415
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.48 E-value=1.1e-12 Score=105.93 Aligned_cols=160 Identities=10% Similarity=0.110 Sum_probs=94.5
Q ss_pred eeeecCcEEEEEEEccCc----cce----------EEe-------------ecCCCEEEEE--cCCEEEEEEccCCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIV----------RKI-------------TATETTEMEH--KGKIQERVVDASELDDD 109 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~----------~~~-------------~~~~~~~~~~--~~~~~~L~i~~~~~~D~ 109 (283)
.+.+|++|+|.|.+.+.. .+. ..+ ....|+.+.. .....+|.|.+++.+|+
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 90 (263)
T 3iu4_H 11 LVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQTDDT 90 (263)
T ss_dssp EECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCGGGC
T ss_pred EEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCHHHC
Confidence 467788999999997632 222 111 1124555543 23578899999999999
Q ss_pred eEEEEEEEecc-----------eeeeeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEec
Q psy14060 110 GYYAITERKYY-----------ALSDLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPI 174 (283)
Q Consensus 110 G~Y~C~a~n~~-----------~~~~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~ 174 (283)
|.|.|.+.+.. +......+ ....+|.+........+..|+.+.|.|.+.+. |. +.++| ++..+
T Consensus 91 G~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v~W--~~~~~ 168 (263)
T 3iu4_H 91 AMYYCARSGVREGRAQAWFAYWGQGTLVTVSAASTKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTVSW--NSGAL 168 (263)
T ss_dssp EEEEEEEEECC---CEEEEEEECCCEEEEECSSCCBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEEEE--GGGTB
T ss_pred EEEEEEEEeCCCCccccccceeCCceEEEEecccCCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEEEE--CCccc
Confidence 99999987652 11111112 22345665533333445688999999999885 43 68999 43332
Q ss_pred CCCC---CeEEEEeC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEE
Q psy14060 175 TSSP---DFQIHTFS---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANL 221 (283)
Q Consensus 175 ~~~~---~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l 221 (283)
.... .......+ ..+.|.|......| |.|+|.+.|..+.......+
T Consensus 169 ~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~ 220 (263)
T 3iu4_H 169 TSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKV 220 (263)
T ss_dssp CTTEEECCCEECTTSCEEEEEEEEEETTHHHH-CCCEEEEEEGGGTEEEEEEC
T ss_pred CCceeecCceECCCCCEEEEEEEEECHhHcCC-CEEEEEEEECCCCcceeEEE
Confidence 2110 00000001 12368888888788 99999999988765444333
No 416
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.48 E-value=5.5e-13 Score=106.94 Aligned_cols=132 Identities=14% Similarity=0.146 Sum_probs=87.4
Q ss_pred cCCceeecCCCcEEEEEEEeee--cCCEEEEEeCCE-----ec--------------CCCCCeEEEEe--CCEEEEEEcC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGD--PLPTIKWFREDF-----PI--------------TSSPDFQIHTF--STKSILIMRQ 195 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~~-----~~--------------~~~~~~~~~~~--~~~~~l~i~~ 195 (283)
.+....+.+|++++|.|.+.+. +...+.|||... .+ ....++.+... ....+|.|.+
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (253)
T 3liz_H 6 ESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSS 85 (253)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECS
T ss_pred cCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 3456788999999999999763 457899998421 11 01134555433 3466799999
Q ss_pred CCCCCCEEEEEEEEeCC----ceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCC-eeE
Q psy14060 196 VFMEDSGVFAVIAENRG----GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPL-DVY 269 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~----g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~-~v~ 269 (283)
+..+|+|.|+|.+.+.. ........|.|.... ..+|.+........+..|+.+.|.|.+.+ .|.+ .+.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~~~~~~g~~v~L~C~~~g~~P~~~~v~ 159 (253)
T 3liz_H 86 LKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVSAAK------TTPPSVYPLAPGSAAQTNSMVTLGCLVKGYFPEPVTVT 159 (253)
T ss_dssp CCGGGCEEEEEEECCBTTTBCCEECCCEEEEECSSC------CBCCEEEEECC------CCEEEEEEEEEEEBSSCCEEE
T ss_pred CChhhCEEEEEEEecCCcceeeEECCCEEEEEeccC------CCCCeEEEecCCcccCCCCcEEEEEEEeeEeCCCeEEE
Confidence 99999999999998752 222233456665210 13566664444455678999999999998 6766 899
Q ss_pred EeeCCEE
Q psy14060 270 WLKVSSL 276 (283)
Q Consensus 270 W~~~g~~ 276 (283)
|+++|..
T Consensus 160 W~~~~~~ 166 (253)
T 3liz_H 160 WNSGSLS 166 (253)
T ss_dssp EGGGTBC
T ss_pred EEeCCee
Confidence 9999973
No 417
>1mq8_A ICAM-1, intercellular adhesion molecule-1, CD54 antigen; IG superfamily, rossmann fold, metal mediated protein interf immune system; HET: NAG; 3.30A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.48 E-value=3e-13 Score=110.19 Aligned_cols=204 Identities=7% Similarity=-0.034 Sum_probs=69.0
Q ss_pred CCcccccCcceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCcc---ce-EEeecCC
Q psy14060 11 LQPWQKKNILKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKE---IV-RKITATE 86 (283)
Q Consensus 11 ~~~~~~~~~~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~---i~-~~~~~~~ 86 (283)
+.+|.+.+. +.|.+....-..+....|.|..+|.. +.+..... .+.+|+.++|.|.+.|... +. .|+....
T Consensus 54 l~~v~~~~~-y~C~~~~~~~~~~~~v~l~V~~~P~~---v~I~~~~~-~~~~G~~~~LtC~v~g~~P~~~l~itW~kg~~ 128 (291)
T 1mq8_A 54 LSNVQEDSQ-PMCYSNCPDGQSTAKTFLTVYWTPER---VELAPLPS-WQPVGKNLTLRCQVEGGAPRANLTVVLLRGEK 128 (291)
T ss_dssp EESCCSCCC-CEEEEECSSCEEEEECEEEECBCCSC---CCBCCCCS-BCCSSCCCEEEEEECCCBSTTTEEEEEESSSS
T ss_pred EEecccCCe-EEEEEEcCCccEEEEEEEEEecCCCC---CEEecCCc-cccCCCCEEEEEEecCccCCCCcEEEEEECCE
Confidence 346766664 77888765556677888999887652 22222222 3888999999999998752 22 5665554
Q ss_pred CEEEEE---cCCEEEEEEccCCCCCCeEEEEEEEeccee---------eeeeccCCCCCCeE-EecCCceeecCCCcEEE
Q psy14060 87 TTEMEH---KGKIQERVVDASELDDDGYYAITERKYYAL---------SDLSEQKPAKPPVF-TKKIQPCRAFEQDQARF 153 (283)
Q Consensus 87 ~~~~~~---~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~---------~~~~~~~~~~~p~~-~~~~~~~~~~~g~~v~l 153 (283)
...-.. ......|.+......|.+.|+|.|.|..+. +....+.+..+|.. .....+..+.+|+.++|
T Consensus 129 ~l~~~~~~~~~~~~~l~~~~~~~D~g~~~~C~A~~~l~~~g~~l~~~~s~~~~L~V~~~P~~~~~~~~p~~l~eG~~v~l 208 (291)
T 1mq8_A 129 ELKREPAVGEPAEVTTTVLVRRDHHGANFSCRTELDLRPQGLELFENTSAPYQLQTFVLPATPPQLVSPRVLEVDTQGTV 208 (291)
T ss_dssp EEEEEECCBTTEEEEEECCCSSSCSSCEEEEEEEEECGGGTSCEEEECCCCEECBC------------------------
T ss_pred EeecccCCCCCceEEEEeeeeeccCCceEEEEEEecCCccCCccccccccceEEEEEecCCCCceecCCcCccCCCeEEE
Confidence 333221 112345655544444445999999987441 22334556555422 11111235778999999
Q ss_pred EEEEeeecCC---EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCC---CCCC--CEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 154 EVEFDGDPLP---TIKWFREDFPITSSPDFQIHTFSTKSILIMRQV---FMED--SGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 154 ~C~~~g~p~~---~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~---~~~d--~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
.|.+.|.+++ .+.|+++|..+.... ...++ .+.+... ..++ .+.|.|.+.+..........|.|..
T Consensus 209 ~C~~~g~~P~~~~~v~w~~~g~~l~~~~----~~~g~--~~~~~~~~~~~~~~~~~~~~~C~~~~~~~~~~~~~~l~v~~ 282 (291)
T 1mq8_A 209 VCSLDGLFPVSEAQVHLALGDQRLNPTV----TYGND--SFSAKASVSVTAEDEGTQRLTCAVILGNQSQETLQTVTIYS 282 (291)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEcCCCCCCcccEEEEEECCEecCcee----eecCC--eEEEEEecceeEcCCCCEEEEEEEEeCCcceEEEEEEEEEc
Confidence 9999987543 589999998876421 11111 1222222 3434 5677788877554455666777765
No 418
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.48 E-value=2.9e-13 Score=105.67 Aligned_cols=127 Identities=13% Similarity=0.125 Sum_probs=85.8
Q ss_pred CceeecCCCcEEEEEEEeeecCCE---EEEEeCCEecCC----------------CCCeEEE-------EeCCEEEEEEc
Q psy14060 141 QPCRAFEQDQARFEVEFDGDPLPT---IKWFREDFPITS----------------SPDFQIH-------TFSTKSILIMR 194 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g~p~~~---~~W~k~~~~~~~----------------~~~~~~~-------~~~~~~~l~i~ 194 (283)
....+..|++++|.|.+.+.+.+. +.|+|++..+.. ..+.... ......+|.|.
T Consensus 9 ~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sL~I~ 88 (225)
T 4fmk_A 9 PEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRDATLAFR 88 (225)
T ss_dssp SEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCBCCEEEC
T ss_pred CEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCcEEEEEc
Confidence 346778999999999998876654 799997643210 0111110 01123469999
Q ss_pred CCCCCCCEEEEEEEEeCCceeEEE-EEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEE-EeeCCCeeEEee
Q psy14060 195 QVFMEDSGVFAVIAENRGGKAKCS-ANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKI-SATKPLDVYWLK 272 (283)
Q Consensus 195 ~~~~~d~G~Y~C~a~n~~g~~~~~-~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~-~g~p~~~v~W~~ 272 (283)
++..+|+|.|+|.+.|..+..... ..+.+.. +|.+...+.......++.+.+.|.+ .+.|.+.+.|++
T Consensus 89 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~c~~~~~~P~~~~~w~~ 158 (225)
T 4fmk_A 89 GLRVEDEGNYTCEFATFPNGTRRGVTWLRVIA----------QPENHAEAQEVTIGPQSVAVARCVSTGGRPPARITWIS 158 (225)
T ss_dssp SCCGGGCEEEEEEEEEETTEEEEEEEEEEEEB----------CCEEEEEECCBCCSSSCEEEEEEEEEEEBSCCEEEEEC
T ss_pred cCCHHHCcceEEEEEeCCCcceeeeeeeeeec----------CCceeecccceeecceeeeeeeeeecCCCCCCEEEEEE
Confidence 999999999999999887765444 3444442 5555555555566677777777765 467778999999
Q ss_pred CCEEe
Q psy14060 273 VSSLS 277 (283)
Q Consensus 273 ~g~~l 277 (283)
++..+
T Consensus 159 ~~~~~ 163 (225)
T 4fmk_A 159 SLGGE 163 (225)
T ss_dssp SSCCE
T ss_pred CCccc
Confidence 87543
No 419
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.47 E-value=4.9e-13 Score=94.24 Aligned_cols=95 Identities=20% Similarity=0.339 Sum_probs=72.8
Q ss_pred cCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeC----CEEEEEEcCCCCCCCEE
Q psy14060 128 QKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS----TKSILIMRQVFMEDSGV 203 (283)
Q Consensus 128 ~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~----~~~~l~i~~~~~~d~G~ 203 (283)
+.+..+|.+...... . ......|.|.+.|.|.|.+.|+|++..+....+..+.... ....|.|.++..+|+|.
T Consensus 3 L~V~~pP~i~~~~~~-~--~~~~~~l~C~~~g~P~p~i~W~k~g~~l~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~ 79 (118)
T 1wwc_A 3 LTVYYPPRVVSLEEP-E--LRLEHCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISEGCLLFNKPTHYNNGN 79 (118)
T ss_dssp -CCCCCCCCCCCCCC-C--CCCEEEEEEEEECSSCCEEEEEETTEECCCSSSEEEEEEECSSEEEEEEEEESCCGGGCEE
T ss_pred EEEecCCceeccCCC-e--eccceEEEEEeeeeCCCeEEEEECCEECCCCCceeEEEeccCccccEEEEECCCChhcCEE
Confidence 456667776544222 2 2256789999999999999999999999876655543322 34579999999999999
Q ss_pred EEEEEEeCCceeEEEEEEEEEe
Q psy14060 204 FAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 204 Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
|+|.|.|..|.....+.|.|..
T Consensus 80 Y~C~a~N~~G~~~~~~~l~v~~ 101 (118)
T 1wwc_A 80 YTLIAKNPLGTANQTINGHFLK 101 (118)
T ss_dssp EEEEEEETTEEEEEEEEECCSC
T ss_pred EEEEEECCCCeEeeEEEEEEcc
Confidence 9999999999988888887664
No 420
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.47 E-value=3.5e-14 Score=97.30 Aligned_cols=89 Identities=25% Similarity=0.528 Sum_probs=75.4
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC----CeEEEEeCCEEEEEEcCCCCCCCEEEEEE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP----DFQIHTFSTKSILIMRQVFMEDSGVFAVI 207 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~----~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~ 207 (283)
.+|.|...+.+..+..|+.+.|.|.+.+.| +.+.|+|++..+.... ++.+...+....|.|.++..+|+|.|+|.
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g~~i~~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~ 85 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNGVELTREDSFKARYRFKKDGKRHILIFSDVVQEDRGRYQVI 85 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESSCBCCCSCCSSCCCEEEECSSEEEEECSSCCGGGCSBEEEE
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECCEECCCCCCcceeEEEEECCCEEEEEECCCChhhCEEEEEE
Confidence 467788888889999999999999999978 9999999999887655 66777777788899999999999999999
Q ss_pred EEeCCceeEEEEEEEEEe
Q psy14060 208 AENRGGKAKCSANLVVEE 225 (283)
Q Consensus 208 a~n~~g~~~~~~~l~v~~ 225 (283)
+.| ....+.|.|.+
T Consensus 86 a~n----~~~~~~l~V~~ 99 (101)
T 2edk_A 86 TNG----GQCEAELIVEE 99 (101)
T ss_dssp CSS----CEECCBEEEEC
T ss_pred EcC----CcEEEEEEEeC
Confidence 976 34456677664
No 421
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.47 E-value=3.2e-13 Score=108.23 Aligned_cols=155 Identities=11% Similarity=0.067 Sum_probs=95.8
Q ss_pred eeeecCcEEEEEEEccCc-cceEEee-----------------------cCCCEEEEE-cCCEEEEEEccCCCCCCeEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EIVRKIT-----------------------ATETTEMEH-KGKIQERVVDASELDDDGYYA 113 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i~~~~~-----------------------~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~ 113 (283)
.+.+|++++|.|.+.... .+. |.. ...++.+.. ......|.|.+++.+|+|.|.
T Consensus 14 ~v~~G~~v~L~C~~~~~~~~v~-W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 92 (252)
T 1oga_E 14 FRKEGQNVTLSCEQNLNHDAMY-WYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSREKKESFPLTVTSAQKNPTAFYL 92 (252)
T ss_dssp EEETTCCEEECCEECSCCSEEE-EEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCSSTTBCCEEECSCCSCCCEEEE
T ss_pred EEcCCCcEEEEEEeCCCCCEEE-EEEECCCCCeEEEEEEccCccccCCccCCcEEEEecCCCEEEEEECcCChhhCEEEE
Confidence 367788999999985432 222 211 123444432 134568999999999999999
Q ss_pred EEEEecc------eeeeeeccC----CCCCCeEEec-CCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCCCCCe
Q psy14060 114 ITERKYY------ALSDLSEQK----PAKPPVFTKK-IQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITSSPDF 180 (283)
Q Consensus 114 C~a~n~~------~~~~~~~~~----~~~~p~~~~~-~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~~~~~ 180 (283)
|.+.+.. +......+. ...+|.+... +....+..|+.+.|.|.+.|. |.+ .+.|++++..+......
T Consensus 93 C~~~~~~~~~~~~~~~~~l~V~~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~~~g~~l~~~~~~ 172 (252)
T 1oga_E 93 CASSSRSSYEQYFGPGTRLTVTEDLKNVFPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWWVNGKEVHSGVST 172 (252)
T ss_dssp EEEESSTTSCCEECCCEEEEEESCGGGCBCCEEEEECCCHHHHHHHSEEEEEEEEEEEBSSCEEEEEEETTEEECSSEEE
T ss_pred EEEecCCccceeECCCEEEEEecccCCCCCCeEEEECCChhhhccCCceEEEEEEeeEcCCCcEEEEEECCEECCCCccc
Confidence 9998851 111111111 1246655443 333445578999999999985 654 89999999887543111
Q ss_pred E--EE-----EeCC----EEEEEEcCCCCC-CCEEEEEEEEeCCce
Q psy14060 181 Q--IH-----TFST----KSILIMRQVFME-DSGVFAVIAENRGGK 214 (283)
Q Consensus 181 ~--~~-----~~~~----~~~l~i~~~~~~-d~G~Y~C~a~n~~g~ 214 (283)
. .. ..+. .+.|.|...... +.|.|+|.+.|....
T Consensus 173 ~~~~~~~~~~~~~gt~~~~s~L~i~~~~~~d~~~~ytC~v~~~~l~ 218 (252)
T 1oga_E 173 DPQPLKEQPALNDSRYSLSSRLRVSATFWQNPRNHFRCQVQFYGLS 218 (252)
T ss_dssp CSSCEESCTTSTTCCEEEEEEEEEEHHHHTCTTCEEEEEEEECCBC
T ss_pred ccccccccccCCCCCEEEEEEEEECHHHhccCCCEEEEEEEcCCCC
Confidence 0 00 0111 134777665543 578999999997654
No 422
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.47 E-value=2.3e-13 Score=111.47 Aligned_cols=135 Identities=15% Similarity=0.194 Sum_probs=89.9
Q ss_pred cCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--EecC-----------------CCCCeEEEEe--CCEEEEEEcC
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--FPIT-----------------SSPDFQIHTF--STKSILIMRQ 195 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~~~~-----------------~~~~~~~~~~--~~~~~l~i~~ 195 (283)
.+....+.+|++++|.|.+.+.+ .+.+.|||+. ..+. ...++.+... ....+|.|.+
T Consensus 28 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 28 QSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred cCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 34567899999999999998865 5789999853 1110 0134444332 3456899999
Q ss_pred CCCCCCEEEEEEEEeCC-c--eeE--EEEEEEEEecc-----CCC-CCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeC
Q psy14060 196 VFMEDSGVFAVIAENRG-G--KAK--CSANLVVEEKR-----QGG-RGGVVPPSFLTTISSAVINVGQLARFDAKISATK 264 (283)
Q Consensus 196 ~~~~d~G~Y~C~a~n~~-g--~~~--~~~~l~v~~~~-----~~~-~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p 264 (283)
+..+|+|.|+|.+.|.. | ... ....|.|.... ... .....++.+...+....+.+|++++|.|.+.+.|
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~~v~~~p~~~~v~~G~~v~L~C~~~~~~ 187 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSSRGGGGSGGGGSGGGGSDLVMSQSPSSLAVSAGEKVTMSCKSSQSL 187 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC----------------CCCEECSCSEEEEETTSCEEEEEEESSCC
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEecCCccccccccCCCCCccceEEcCCCEEEEcCCCcEEEEEEcCCcc
Confidence 99999999999999874 2 111 12356655300 000 0000134455556677899999999999998877
Q ss_pred CC------eeEEeeC
Q psy14060 265 PL------DVYWLKV 273 (283)
Q Consensus 265 ~~------~v~W~~~ 273 (283)
.+ .+.|+|+
T Consensus 188 ~~~~~~~~~v~W~k~ 202 (291)
T 2gki_A 188 FNSRTRKNYLAWYQQ 202 (291)
T ss_dssp EETTTTEECEEEEEE
T ss_pred ccccccceeEEEEEE
Confidence 65 8999996
No 423
>1l6x_A Immunoglobulin gamma-1 heavy chain constant regio; IGG1 FC, FC complex, immune system; HET: NAG BMA MAN GAL FUL; 1.65A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2iwg_A* 3v7m_A* 3d6g_A* 3agv_A* 1oqo_A* 1oqx_A* 3v95_A* 2wah_A* 3sgj_A* 3sgk_A* 2dtq_A* 2dts_A* 3ave_A* 3ay4_A* 3do3_A* 2gj7_A* 1t83_A* 1t89_A* 1dn2_A* 3dnk_A ...
Probab=99.47 E-value=9.9e-14 Score=107.82 Aligned_cols=153 Identities=10% Similarity=0.011 Sum_probs=87.9
Q ss_pred eecCcEEEEEEEccCc----cce-EEeecCCCE-------EEEEcCCE----EEEEEccCCCCCCeEEEEEEEecceee-
Q psy14060 61 HTAKSQQVQKEKKGDK----EIV-RKITATETT-------EMEHKGKI----QERVVDASELDDDGYYAITERKYYALS- 123 (283)
Q Consensus 61 ~~g~~v~l~C~~~g~~----~i~-~~~~~~~~~-------~~~~~~~~----~~L~i~~~~~~D~G~Y~C~a~n~~~~~- 123 (283)
.+|+.++|.|.+.|.+ .+. .|...+... .....++. ..|.|......|+|.|+|.+.|..+..
T Consensus 16 ~~G~~v~L~C~~~g~~p~~~~~~v~W~k~~~~~~~~~~~~~~~~~~g~~~~~~~l~i~~~d~~d~g~Y~C~a~n~~~~~~ 95 (207)
T 1l6x_A 16 MISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPAP 95 (207)
T ss_dssp CTTSCCEEEEEEEEECSSSCCCEEEEEETTEEECCCEECCCEECTTSCEEEEEEEECCHHHHHTTCCEEEEEECTTSSSC
T ss_pred ecCCceEEEEEEecccCCCCCeEEEEEECCccccCcccCCceeccCCcEEEEEEEEEEHHHccCCceEEEEEEcCcCCcc
Confidence 5788999999999864 122 443322110 01111121 123333333445999999999987632
Q ss_pred e--eecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEecCCCCCeEEEEe-CC----EEEEE
Q psy14060 124 D--LSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPITSSPDFQIHTF-ST----KSILI 192 (283)
Q Consensus 124 ~--~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~~~~~~~~~~~-~~----~~~l~ 192 (283)
. ...+ .+..+|.+...........|..+.|.|.+.|. |. +.+.|+++|..+........... +. ...|.
T Consensus 96 ~~~~v~~~~~~~~~P~v~~~~~~~~~~~~~~~~L~C~~~g~~P~~~~v~W~k~g~~~~~~~~~~~~~~~~gt~~~~s~l~ 175 (207)
T 1l6x_A 96 IEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKTTPPVLDSDGSFFLYSKLT 175 (207)
T ss_dssp EEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEEECCEEECCCEECTTSCEEEEEEEE
T ss_pred eEEEeccCCCCCcCCEEEEECCChHHhcCCcEEEEEEEeCeECCCeEEEEEECCeeccCccccCceECCCCCEEEEEEEE
Confidence 1 1212 34456766544333222345679999999985 54 49999999988753211111111 11 12355
Q ss_pred EcCCCCCCCEEEEEEEEeCCc
Q psy14060 193 MRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~g 213 (283)
+......|.|.|+|.+.|...
T Consensus 176 i~~~~~~~~g~YtC~a~n~~l 196 (207)
T 1l6x_A 176 VDKSRWQQGNVFSCSVMHEAL 196 (207)
T ss_dssp EEHHHHHTTCCEEEEEECTTS
T ss_pred ECHHHcCCCCEEEEEEEcCCc
Confidence 555555679999999999764
No 424
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.46 E-value=3.3e-13 Score=92.89 Aligned_cols=89 Identities=26% Similarity=0.520 Sum_probs=73.1
Q ss_pred CCCCeEEecCCc-eeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCC-CCeEEEEeCCEEEEEEcCCCCCCCEEEEEEE
Q psy14060 131 AKPPVFTKKIQP-CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS-PDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 131 ~~~p~~~~~~~~-~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~-~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 208 (283)
..+|.|+..+.. ..+..|+.+.|.|.+ +.|.+.+.|+|++..+... .++.+...+....|.|.++..+|+|.|+|.+
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a 91 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFESIGAKRTLTISQCSLADDAAYQCVV 91 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESSSEECCCSSSSEEEEETTEEEEEECSCSSSSCEEEEEEE
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECCEECCCCCCeEEEEecCCEEEEEECCCCcccCEEEEEEE
Confidence 346777777666 789999999999999 6788899999999998876 6778877777889999999999999999999
Q ss_pred EeCCceeEEEEEEEEE
Q psy14060 209 ENRGGKAKCSANLVVE 224 (283)
Q Consensus 209 ~n~~g~~~~~~~l~v~ 224 (283)
+.....+.|.|.
T Consensus 92 ----~~~~~~~~l~V~ 103 (104)
T 1pd6_A 92 ----GGEKCSTELFVK 103 (104)
T ss_dssp ----TTEEECCEEEEE
T ss_pred ----CCCcEEEEEEEe
Confidence 334455566554
No 425
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.46 E-value=7.8e-13 Score=112.28 Aligned_cols=154 Identities=12% Similarity=0.076 Sum_probs=101.8
Q ss_pred eeecCcEEEEEEEccC---cc-ce-EEeecCCCEE-------EE-EcC---CEEEEEEccCCCCCCeEEEEEEEecceee
Q psy14060 60 IHTAKSQQVQKEKKGD---KE-IV-RKITATETTE-------ME-HKG---KIQERVVDASELDDDGYYAITERKYYALS 123 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~---~~-i~-~~~~~~~~~~-------~~-~~~---~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~ 123 (283)
+..|+.++|.|.+.|. |. +. .|........ .. ..+ ....|.|.+++.+|+|.|+|.+.+.....
T Consensus 180 ~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C~~~~~~~~~ 259 (376)
T 2aty_A 180 LTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKCRVNSAAFPA 259 (376)
T ss_pred eeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEEEEecCCCCC
Confidence 6788999999999987 32 22 3433321110 00 011 24479999999999999999998876521
Q ss_pred ---eeec--cCCCCCCeEEecCCceeecCCCcEEEEEEEeee-c-CCEEEEEeCCEecCCCCCeEE--EEeCC---EEEE
Q psy14060 124 ---DLSE--QKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-P-LPTIKWFREDFPITSSPDFQI--HTFST---KSIL 191 (283)
Q Consensus 124 ---~~~~--~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p-~~~~~W~k~~~~~~~~~~~~~--~~~~~---~~~l 191 (283)
.... +.+..+|.+...+.......|+.++|.|.+.|. | .+.++|+|++..+........ ..++. .+.|
T Consensus 260 ~~~~~v~~~~~~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgty~~~s~L 339 (376)
T 2aty_A 260 PIEKTISKTKGRPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAENYKNTQPIMNTNESYFVYSKL 339 (376)
T ss_pred ceEEEEcCCCCCCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECCCeEeCCceECCCCCEEEEEEE
Confidence 1111 245567877766666555668899999999985 4 468999999988743221111 11111 2357
Q ss_pred EEcCCCCCCCEEEEEEEEeCCc
Q psy14060 192 IMRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 192 ~i~~~~~~d~G~Y~C~a~n~~g 213 (283)
.|......|.|.|+|.+.|..-
T Consensus 340 ~i~~~~~~~~~~YtC~v~h~~l 361 (376)
T 2aty_A 340 NVQKSNWEAGNTFTCSVLHEGL 361 (376)
T ss_pred EEcHHHhCCCCcEEEEEEeCCC
Confidence 7777777789999999998753
No 426
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.46 E-value=5.5e-13 Score=103.66 Aligned_cols=146 Identities=10% Similarity=0.068 Sum_probs=87.1
Q ss_pred eeeecCcEEEEEEEccCccceEEee------------------cCCCEEEEEc---CCEEEEEEccCCCCCCeEEEEEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIVRKIT------------------ATETTEMEHK---GKIQERVVDASELDDDGYYAITER 117 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~~~~~------------------~~~~~~~~~~---~~~~~L~i~~~~~~D~G~Y~C~a~ 117 (283)
.+.+|++++|.|.+.+......|.. ...|+.+... .+...|.|.+++.+|+|.|.|.+.
T Consensus 12 ~v~~G~~v~L~C~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 91 (207)
T 1ypz_E 12 SLHEGTDSALRCNFTTTMRSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDSGTYFCAAD 91 (207)
T ss_dssp EEETTCCEEEEEEESSCCSEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGCEEEEEEEE
T ss_pred EEccCCcEEEEEEEeCCCeEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHCEEEEEEEe
Confidence 3677889999999987542112211 2345555543 567899999999999999999988
Q ss_pred ecce------------eeeeeccCCC------CCCeEEecCCceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEecCCC
Q psy14060 118 KYYA------------LSDLSEQKPA------KPPVFTKKIQPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPITSS 177 (283)
Q Consensus 118 n~~~------------~~~~~~~~~~------~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~~~ 177 (283)
+..+ ......+.+. .+|.+.. ..+ .+.|.|.+.+. |. +.+.|+++ ..+...
T Consensus 92 ~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~~~~~P~v~~-------~~~-~~~l~C~~~g~~P~~~~v~W~~~-~~l~~~ 162 (207)
T 1ypz_E 92 TWHISEGYELGTDKLVFGQGTQVTVEPKSQPPAKPSVFI-------MKN-GTNVACLVKDFYPKEVTISLRSS-KKIVEF 162 (207)
T ss_dssp CBCCCTTCCCCCCCCEECCCEEEEEECCCCCCCCCEEEE-------EEE-TTEEEEEEEEESSSCCEEEEECS-SEEEEC
T ss_pred cCCcccccccccceeeecCccEEEEccCCCCCCCCeEEE-------eCC-CCeEEEEEeeEeCCCeEEEEecC-CcccCC
Confidence 7631 1111122221 2333221 111 36899999875 54 79999999 655432
Q ss_pred CCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 178 PDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 178 ~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
........+....+. ......|.|.|+|.+.|..+.
T Consensus 163 ~~~~~~~~~g~y~~~-~~~~~~~~~~ytC~v~~~~~~ 198 (207)
T 1ypz_E 163 DPAIVISPSGKYSAV-KLGQYGDSNSVTCSVQHNSET 198 (207)
T ss_dssp CCEEEECTTSSEEEE-ECEEESSTTTCEEEEEETTEE
T ss_pred ccceEEcCCCcEEEE-EeecccCCCcEEEEEEECCcc
Confidence 211111112222222 222236789999999998754
No 427
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=1.9e-13 Score=95.55 Aligned_cols=93 Identities=24% Similarity=0.398 Sum_probs=73.5
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeee---cCCEEEEEeCCEe-cCC--CCCeEEEEe-CC-----EEEEEEcCCCCCC
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGD---PLPTIKWFREDFP-ITS--SPDFQIHTF-ST-----KSILIMRQVFMED 200 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~---p~~~~~W~k~~~~-~~~--~~~~~~~~~-~~-----~~~l~i~~~~~~d 200 (283)
.+.|+..+....+.+|+.+.|.|.+.+. |.|.+.|||+... +.. ..++.+... .+ ...|.|.++...|
T Consensus 12 ~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 91 (118)
T 2edn_A 12 TGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGKWLELGSKSGARFSFKESHNSASNVYTVELHIGKVVLGD 91 (118)
T ss_dssp SSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETTTCCCCCSTTSSCEEEEEECSSSCEEEEEEEESSCCTTT
T ss_pred cceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCCEeccCCCCccEEEeccccccccccceEEEEEeeCChhh
Confidence 4567777888899999999999999875 7899999997422 221 234444321 11 4689999999999
Q ss_pred CEEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 201 SGVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+|.|+|.+.|..|..++.+.|.|.+
T Consensus 92 ~G~Y~Cevsn~~g~~s~~~~L~V~~ 116 (118)
T 2edn_A 92 RGYYRLEVKAKDTCDSCGFNIDVEA 116 (118)
T ss_dssp CSCEEEEEECSSCEEEEEECCEEEC
T ss_pred CEEEEEEEEEcCCcEEEEEEEEEEc
Confidence 9999999999999999999999885
No 428
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.45 E-value=2.9e-12 Score=100.96 Aligned_cols=153 Identities=14% Similarity=0.127 Sum_probs=96.1
Q ss_pred eeeecCcEEEEEEEccCc----cce--E--------Ee--------------ecCCCEEEEEc--CCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIV--R--------KI--------------TATETTEMEHK--GKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~--~--------~~--------------~~~~~~~~~~~--~~~~~L~i~~~~~~D 108 (283)
.+.+|+.|+|.|.+.+.. .+. + .+ ....|+.+..+ ....+|.|.+++.+|
T Consensus 11 ~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 90 (226)
T 3mlr_H 11 VKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTLQASD 90 (226)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSCCGGG
T ss_pred EEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCCCccc
Confidence 366788999999997632 222 1 11 01235554432 357889999999999
Q ss_pred CeEEEEEEEecc------------eeeeeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeee-c-CCEEEEEeCCE
Q psy14060 109 DGYYAITERKYY------------ALSDLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-P-LPTIKWFREDF 172 (283)
Q Consensus 109 ~G~Y~C~a~n~~------------~~~~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p-~~~~~W~k~~~ 172 (283)
+|.|.|.+.+.. +......+ ....+|.+........+..|+.+.|.|.+.+. | .+.+.| ++.
T Consensus 91 sG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~~~v~W--~~~ 168 (226)
T 3mlr_H 91 TGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGTTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--NSG 168 (226)
T ss_dssp CEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCCCBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSCCEEEE--GGG
T ss_pred CEEEEEeEccCCCcccccchhhhhCCccEEeeccCCCCCCcEEEecCcccccCCCCEEEEEEEEEEECCCeEEEE--CCc
Confidence 999999886542 11111112 22345655543344455689999999999884 4 468999 333
Q ss_pred ecCC-----------CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE
Q psy14060 173 PITS-----------SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 173 ~~~~-----------~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 219 (283)
.+.. ...+.+ .+.|.|......| |.|+|.+.|..+......
T Consensus 169 ~~~~~~~~~~~~~~~~g~~~~-----~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~ 220 (226)
T 3mlr_H 169 ALTSGVHTFPAVLQSSGLYSL-----SSVVTVPSSSLGT-QTYICNVNHKPSNTKVDK 220 (226)
T ss_dssp TCCTTEEECCCEECTTSCEEE-----EEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEE
T ss_pred cccCCeEeCCcEECCCCCEEE-----EEEEEECHhHcCC-CeEEEEEEECCCCcCeEE
Confidence 2211 111111 2368888888888 999999999876654433
No 429
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.45 E-value=1.8e-13 Score=94.06 Aligned_cols=89 Identities=19% Similarity=0.323 Sum_probs=77.1
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.+...+....+..|+.+.|.|.+.+.|.+ +.|+|++..+....++.+...+....|.|.++..+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~---- 81 (103)
T 2e7b_A 7 GPVRFQEALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGNNVLRPGDKYSLRQEGAMLELVVRNLRPQDSGRYSCS---- 81 (103)
T ss_dssp CCCCCTBCCCCEEEESSSCEEEEEECSSCCCS-CEEEESSSBCCCSSSEEEEECSSEEEEEECSCCTTTCCCEEEE----
T ss_pred CCCEEEecCccEEEECCCcEEEEEEEeCCCCC-eEEEECCEECCCCCcEEEEEcCCEEEEEEccCCcccCEEEEEE----
Confidence 46777777788899999999999999998888 9999999998877788888888888999999999999999998
Q ss_pred CceeEEEEEEEEEe
Q psy14060 212 GGKAKCSANLVVEE 225 (283)
Q Consensus 212 ~g~~~~~~~l~v~~ 225 (283)
.|.....+.|.|..
T Consensus 82 ~g~~~~~~~l~V~~ 95 (103)
T 2e7b_A 82 FGDQTTSATLTVTA 95 (103)
T ss_dssp CSSCBCCBCEEEEC
T ss_pred ECCcEEEEEEEEEe
Confidence 45566667788875
No 430
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.44 E-value=9.6e-13 Score=88.17 Aligned_cols=83 Identities=14% Similarity=0.340 Sum_probs=69.0
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCC
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
++.+...+....+..|+.+.|.|.+.|.|.|.+.|+|++..+.... ...|.|.++..+|+|.|+|.+.|..
T Consensus 3 ~~~i~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n~~ 73 (91)
T 3bfo_A 3 KLQICVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNELPLTHET---------KKLYMVPYVDLEHQGTYWCHVYNDR 73 (91)
T ss_dssp CCEEEECCCCEEECTTSCEEEECEEECSSCCEEEEEETTEECTTCC---------SSEEEESSCCGGGCEEEEEEEECSS
T ss_pred ceEEEECCCccEecCCCcEEEEEEeccCCCCEEEEEcCCeeCCcCC---------CCeEEECCCCHHhCEEEEEEEEcCC
Confidence 5667777778889999999999999999999999999999876543 2369999999999999999999999
Q ss_pred ceeE-EEEEEEEE
Q psy14060 213 GKAK-CSANLVVE 224 (283)
Q Consensus 213 g~~~-~~~~l~v~ 224 (283)
|... ..+.|.|.
T Consensus 74 g~~~s~~~~l~V~ 86 (91)
T 3bfo_A 74 DSQDSKKVEIIID 86 (91)
T ss_dssp CEEECCCEEEEEC
T ss_pred CCEEeeeEEEEEe
Confidence 8654 33555554
No 431
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.44 E-value=4.8e-14 Score=100.11 Aligned_cols=100 Identities=17% Similarity=0.259 Sum_probs=82.3
Q ss_pred eeccCCCCCCeEEecCCceeecCCCcEEEEEEEeeecCCE-EEEEeCCEecCC--CCCeEEE--EeCC--EEEEEEcCCC
Q psy14060 125 LSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPITS--SPDFQIH--TFST--KSILIMRQVF 197 (283)
Q Consensus 125 ~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~-~~W~k~~~~~~~--~~~~~~~--~~~~--~~~l~i~~~~ 197 (283)
...+.+..+|.+.. +....+..|+.+.|.|.+.|.|.|. +.|++++..+.. ..++.+. .... .+.|.|.++.
T Consensus 6 ~~~l~V~~~P~i~~-~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~~~l~~~~~~~~~~~~~~~~~~~~~~L~I~~v~ 84 (122)
T 2cry_A 6 SGTLTVNGPPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEEGVISTLTISNIV 84 (122)
T ss_dssp CCCCCCCSSCCEEE-ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSSCEECSEEETTEEEEEEEETTEEEEEEECTTCC
T ss_pred EEEEEEecCCCccC-CCeEEEecCCCEEEEEEEeecCCCcEeEEEECCEEccCCCCCCEEEEEecCCCceEEEEEEcCCC
Confidence 34567778898887 7778899999999999999999986 999999988875 3455553 2233 5689999999
Q ss_pred CCCC-EEEEEEEEeCCceeEEEEEEEEEe
Q psy14060 198 MEDS-GVFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 198 ~~d~-G~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
.+|. |.|+|.|.|..|.....+.|.|..
T Consensus 85 ~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~ 113 (122)
T 2cry_A 85 RADFQTIYNCTAWNSFGSDTEIIRLKEQG 113 (122)
T ss_dssp HHHHHSCEEEEEECSSCEEEEEECCCCSC
T ss_pred hhhCCceEEEEEECCCCeEEEEEEEEECC
Confidence 9999 999999999999988888877764
No 432
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.44 E-value=4.3e-12 Score=101.86 Aligned_cols=163 Identities=10% Similarity=0.095 Sum_probs=97.9
Q ss_pred eeeecCcEEEEEEEccCc----cce----------EEe--------------ecCCCEEEEEc--CCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIV----------RKI--------------TATETTEMEHK--GKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~----------~~~--------------~~~~~~~~~~~--~~~~~L~i~~~~~~D 108 (283)
.+.+|++|+|.|.+.+.. .+. ..+ ....|+.+..+ .+..+|.|.+++.+|
T Consensus 34 ~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 113 (256)
T 3sob_H 34 LVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLRAED 113 (256)
T ss_dssp EECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCCGGG
T ss_pred EEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCCccc
Confidence 366788999999997532 221 011 01245555432 357889999999999
Q ss_pred CeEEEEEEEecc--------------eeeeeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEeee-c-CCEEEEEeC
Q psy14060 109 DGYYAITERKYY--------------ALSDLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD-P-LPTIKWFRE 170 (283)
Q Consensus 109 ~G~Y~C~a~n~~--------------~~~~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p-~~~~~W~k~ 170 (283)
+|.|.|.+.+.. +......+ ....+|.+........+..|+.+.|.|.+.+. | .+.+.| +
T Consensus 114 sG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~~~~v~W--~ 191 (256)
T 3sob_H 114 TAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPVTVSW--N 191 (256)
T ss_dssp CEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSCCBCCEEEEECCC-----TTEEEEEEEEEEEBSSCCEEEE--G
T ss_pred CEEEEEEEecCCCccccccccceeEECCCEEEEEecCCCCCCEEEEECCCcccccCCcEEEEEEEEEEECCCeEEEE--C
Confidence 999999987642 11111122 23345665544444456789999999999874 5 357999 4
Q ss_pred CEecCCCC---CeEEEEeC---CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEE
Q psy14060 171 DFPITSSP---DFQIHTFS---TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224 (283)
Q Consensus 171 ~~~~~~~~---~~~~~~~~---~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~ 224 (283)
+..+.... .......+ ..+.|.|.....+| |.|+|.+.|..+.......+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d-~~ytC~v~~~~~~~~~~~~~~~~ 250 (256)
T 3sob_H 192 SGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVEPK 250 (256)
T ss_dssp GGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGTTT-CCCEEEEEEGGGTEEEEEECCCC
T ss_pred CcccCCCeEeCCceeCCCCCEEEEEEEEECHHHcCC-ceEEEEEEeCCCCcceEEEeccc
Confidence 43332110 00000001 12368889888889 99999999988766655555443
No 433
>2aty_A Complement receptor chimeric conjugate CR2-IG; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.44 E-value=6.1e-13 Score=112.96 Aligned_cols=136 Identities=11% Similarity=0.047 Sum_probs=90.5
Q ss_pred EecCCcee-ecCCCcEEEEEEEeee-cC---CEEEEEeCCEecCCCCC---eEEE--EeCCEEEEEEcCCCCCCCEEEEE
Q psy14060 137 TKKIQPCR-AFEQDQARFEVEFDGD-PL---PTIKWFREDFPITSSPD---FQIH--TFSTKSILIMRQVFMEDSGVFAV 206 (283)
Q Consensus 137 ~~~~~~~~-~~~g~~v~l~C~~~g~-p~---~~~~W~k~~~~~~~~~~---~~~~--~~~~~~~l~i~~~~~~d~G~Y~C 206 (283)
+..+.... +..|++++|.|.+.|. |. ..+.|+|++..+..... .... .......|.|..+..+|.|.|+|
T Consensus 171 ~~~p~~~~~~~~g~~v~L~C~~~g~~P~p~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~s~L~I~~~~~~D~g~Y~C 250 (376)
T 2aty_A 171 IFPPKPKDVLTITLTPKVTCVVVDISKDDPEVQFSWFVDDVEVHTAQTQPREEQFNSTFRSVSELPIMHQDWLNGKEFKC 250 (376)
T ss_pred EeCcCHHHceeeCCeeEEEEEEeccccCCCccEEEEEECCccccCcccCCCCcccCCcEEEEEEEEechHhccCCCEEEE
Confidence 33444344 7789999999999987 33 36999999866532110 0000 01123469999999999999999
Q ss_pred EEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeC--CCeeEEeeCCEEec
Q psy14060 207 IAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATK--PLDVYWLKVSSLSD 278 (283)
Q Consensus 207 ~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p--~~~v~W~~~g~~l~ 278 (283)
.+.+..+.......+.+... ...+|.+...+.......|+.++|.|.+.|.+ .+.|+|++||+.+.
T Consensus 251 ~~~~~~~~~~~~~~v~~~~~------~~~~P~v~v~~~~~~~~~g~~~~L~C~~~g~~P~~i~v~W~k~g~~~~ 318 (376)
T 2aty_A 251 RVNSAAFPAPIEKTISKTKG------RPKAPQLYTIPPPKEQMAKDKVSLTCMITDFFPEDITVEWQWNGQPAE 318 (376)
T ss_pred EEecCCCCCceEEEEcCCCC------CCcCCeEEeeCCCHHHhcCCceEEEEEEEEeECCCcEEEEEECCEECC
Confidence 99998764333333322100 01467777666555555689999999999853 34899999999874
No 434
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.44 E-value=4.1e-13 Score=94.44 Aligned_cols=95 Identities=21% Similarity=0.322 Sum_probs=70.2
Q ss_pred CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCC-----CeEEEEeCCEEEEEE--cCCCCCCCE
Q psy14060 130 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSP-----DFQIHTFSTKSILIM--RQVFMEDSG 202 (283)
Q Consensus 130 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~-----~~~~~~~~~~~~l~i--~~~~~~d~G 202 (283)
+..+|.+...+....+..|+.+.|.|.+.|.|.|.+.|+|++..+.... .......+....+.| .++..+|+|
T Consensus 6 ~~~pP~i~~~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~v~~~D~G 85 (117)
T 2v9t_A 6 EDFPPRIVEHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGGERVETDKDDPRSHRMLLPSGSLFFLRIVHGRKSRPDEG 85 (117)
T ss_dssp CCEEEEEEECCCCEEECTTCCEEECCEEEEESCCEEEEEETTEECCCTTTCSSCSEEECTTSCEEESSCCCBTTBCSSCE
T ss_pred ccCCCeeEcCCCCEEEcCCCcEEEEEECCccCCCeEEEEECCEeccccCCCCcceeEEecCCcEEEEEEEeCCCCcCcCE
Confidence 3457888888888899999999999999999999999999999876432 112212222222222 256789999
Q ss_pred EEEEEEEeCCceeEEE-EEEEEE
Q psy14060 203 VFAVIAENRGGKAKCS-ANLVVE 224 (283)
Q Consensus 203 ~Y~C~a~n~~g~~~~~-~~l~v~ 224 (283)
.|+|.|.|..|...+. +.+.+.
T Consensus 86 ~Y~C~a~N~~G~~~s~~~~l~~~ 108 (117)
T 2v9t_A 86 VYVCVARNYLGEAVSHDASLEVA 108 (117)
T ss_dssp EEEEEEEETTEEEECCCEEEEEC
T ss_pred EEEEEEEeCccceEeeeEEEEhh
Confidence 9999999999987654 555554
No 435
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.44 E-value=3.4e-13 Score=113.88 Aligned_cols=104 Identities=16% Similarity=0.108 Sum_probs=68.3
Q ss_pred CCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCC----CCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCcee
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS----PDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~----~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~ 215 (283)
+....+..|+.+.|.|.+.| |.|.+.|++++..+... .++.+ . . .+|.|.+++.+|+|.|+|.|.|..|..
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~~~~~~~~~~r~~~-~-~--~~L~I~~v~~~D~G~Y~C~a~N~~g~~ 327 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNEQVLSQGSNGSVSV-R-N--GDLFFKKVQVEDGGVYTCYAMGETFNE 327 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSCBCCSCCSSSSEEE-E-T--TEEEESSCCTTSCEEEEEEEECSSCEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCeeEeecccCCceEe-e-c--CeEEEeecCcccCEEEEEEEecCCCcc
Confidence 45568899999999999999 99999999987654332 24444 2 2 259999999999999999999999999
Q ss_pred EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCCeeE
Q psy14060 216 KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPLDVY 269 (283)
Q Consensus 216 ~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~~v~ 269 (283)
...+.+.|.. .+ ..|+.++|.|.+.|+|.|+|+
T Consensus 328 ~~~~~l~V~~----------~~-----------~~g~~~~l~C~~~g~P~P~i~ 360 (361)
T 2xot_A 328 TLSVELKVYN----------FT-----------LHGHHDTLNAAADPWSHPQFE 360 (361)
T ss_dssp EEEEEEEEES----------SC-----------CC-------------------
T ss_pred EEEEEEEEEe----------ee-----------ccCCceEEEEEeCCCCCCccc
Confidence 9888888864 22 578899999999999999874
No 436
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.44 E-value=3.6e-13 Score=106.47 Aligned_cols=141 Identities=15% Similarity=0.149 Sum_probs=89.6
Q ss_pred EecCCceeecCCCcEEEEEEEeee--cCCEEEEEeCC--Ee---cC-------------CCCCeEEEEeC--CEEEEEEc
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGD--PLPTIKWFRED--FP---IT-------------SSPDFQIHTFS--TKSILIMR 194 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~--~~---~~-------------~~~~~~~~~~~--~~~~l~i~ 194 (283)
...+..+.+..|++++|.|.+.+. +.+.+.|||.. .. +. ...++.+.... ...+|.|.
T Consensus 5 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (230)
T 1ypz_F 5 EQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTIY 84 (230)
T ss_dssp ECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEEC
T ss_pred cccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEEC
Confidence 344566788999999999999874 56789999853 11 10 12334444322 45689999
Q ss_pred CCCCCCCEEEEEEEEeC--Cc--eeEEEEEEEEEeccC-CCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CC-Ce
Q psy14060 195 QVFMEDSGVFAVIAENR--GG--KAKCSANLVVEEKRQ-GGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KP-LD 267 (283)
Q Consensus 195 ~~~~~d~G~Y~C~a~n~--~g--~~~~~~~l~v~~~~~-~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~-~~ 267 (283)
++..+|+|.|.|.+.+. .. .......|.|..... ........|.+.. +....+..|+.++|.|.+.|. |. +.
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~~~~~~l~~~~~p~~~v~~-p~~~~v~~g~~~~L~C~~~g~~P~~~~ 163 (230)
T 1ypz_F 85 SLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVIPSDKRLDADISPKPTIFL-PSVAETNLHKTGTYLCLLEAFFPDVIR 163 (230)
T ss_dssp SCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEECCCTTCCSCCSCCCCEEC-CCHHHHHHHSCEEEEEEEEEESSCCCE
T ss_pred cCChhhCEEEEEEEECCCCCcccccCCCEEEEEecccccCcccCCCCceEEC-CCchhhccCCcceEEEEEeeecCCCeE
Confidence 99999999999999874 11 111224677762100 0000001122222 333445678999999999987 75 58
Q ss_pred eEEee-CCEEec
Q psy14060 268 VYWLK-VSSLSD 278 (283)
Q Consensus 268 v~W~~-~g~~l~ 278 (283)
+.|++ ||+.+.
T Consensus 164 v~W~~~~g~~l~ 175 (230)
T 1ypz_F 164 VYWKEKDGNTIL 175 (230)
T ss_dssp EEEECTTSSCBC
T ss_pred EEEEccCCeEcc
Confidence 99999 887664
No 437
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.44 E-value=2.1e-12 Score=118.86 Aligned_cols=182 Identities=13% Similarity=0.060 Sum_probs=114.0
Q ss_pred CcEEEEEEEccCccce-EEeecCCCEEEEEcCCEEEEEEccCCCCC-CeEEEEEEEecceeeeee-----ccCCCCCCeE
Q psy14060 64 KSQQVQKEKKGDKEIV-RKITATETTEMEHKGKIQERVVDASELDD-DGYYAITERKYYALSDLS-----EQKPAKPPVF 136 (283)
Q Consensus 64 ~~v~l~C~~~g~~~i~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~D-~G~Y~C~a~n~~~~~~~~-----~~~~~~~p~~ 136 (283)
..+.|.|.+.|.|... .|...+..... .....+.|..+...+ ++.|.|.+.+..|..... ......+|.+
T Consensus 92 g~l~v~c~~~g~P~p~i~W~k~g~~~~~---~~~~~~~i~~~~~~~~~l~~~~va~~~~G~~~~~~v~~~~~~~~~~p~~ 168 (731)
T 2v5y_A 92 GLLNVYVKVNNGPLGNPIWNISGDPTRT---WNRAELAISTFWPNFYQVIFEVITSGHQGYLAIDEVKVLGHPCTRTPHF 168 (731)
T ss_dssp EEEEEEEEETTCCCCSEEEEECCCCCSS---CEEEEEEECCCTTSCEEEEEEEEECSSCCEEEECCBEEESSCCSSSCEE
T ss_pred ceEEEEEecCCCCccceeEEEeCCcCCc---eeEEEEEEeecCCCceEEEEEEEecCCceEEEEeeEEeeeccccccccc
Confidence 3699999999988322 33333322111 123345565442333 478888777776632211 1123356777
Q ss_pred EecCCceeecCCCcEEEEEEEeeecCCEEE-EE--eCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCc
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGDPLPTIK-WF--REDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~-W~--k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g 213 (283)
. .+.+..+..|+.+.|.|.+.|.|.|.+. |+ +++..+.......+........|.|.++...|.|.|.|.|.|..|
T Consensus 169 ~-~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G 247 (731)
T 2v5y_A 169 L-RIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGG 247 (731)
T ss_dssp C-CCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEEECCSSEEEEEEEECSCCTTTCEEEEEEEEETTE
T ss_pred c-cccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceEEeccccceEEEEEcccccccCeEEEEEEECCCC
Confidence 6 5667889999999999999999999887 77 677655322111111111235799999999999999999999999
Q ss_pred e-eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEE
Q psy14060 214 K-AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKI 260 (283)
Q Consensus 214 ~-~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~ 260 (283)
. ....+.|.|.. +|.....+.... .....+.|.|..
T Consensus 248 ~~~s~~~~l~V~~----------~P~~~~~p~~~~-~~~~~v~l~w~~ 284 (731)
T 2v5y_A 248 VGISNYAELVVKE----------PPVPIAPPQLAS-VGATYLWIQLNA 284 (731)
T ss_dssp EEECCCEEEEEEC----------CCCBSSCCEEEE-ECSSCEEEECCC
T ss_pred CcceeeEEEEEec----------CCCCCCCcceec-cCCceEEEEeCC
Confidence 7 66667788875 232222221122 234667888865
No 438
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.43 E-value=6.4e-12 Score=98.70 Aligned_cols=183 Identities=12% Similarity=0.166 Sum_probs=118.1
Q ss_pred cCCeeeecCcEEEEEEEccC-c---cce-EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeee-eccC
Q psy14060 56 HGKEIHTAKSQQVQKEKKGD-K---EIV-RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSDL-SEQK 129 (283)
Q Consensus 56 ~~~~v~~g~~v~l~C~~~g~-~---~i~-~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~-~~~~ 129 (283)
.+..+..|+.++|+|.+.|. | ..+ +|..++.. ..+....|.+..++..|+|.|+|.+.|..+.... ..+.
T Consensus 10 ~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~----IsGaT~tLti~s~t~sdSG~YqCvVTDa~Gcs~tSs~Vt 85 (304)
T 3shs_A 10 NKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQP----HENNTATLTVADATSENAGSYKVTVQDTDTMTSVESEVF 85 (304)
T ss_dssp SCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEE----CSCCSSEEEESSCCGGGCEEEEEEEEETTTCCEEECCCE
T ss_pred CCccccCCCCEEEEEEecCCCCCCCCceEEEEECCcc----ccCCcceEEeeeccccCCeEEEEEEEECCCCeeeeeeEE
Confidence 33458889999999999765 4 233 66654422 2223457899999999999999999998774322 1122
Q ss_pred CCC--CCeEE-ecCCceeecCCCcEEEEEEE--ee-ec-----CCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCC
Q psy14060 130 PAK--PPVFT-KKIQPCRAFEQDQARFEVEF--DG-DP-----LPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFM 198 (283)
Q Consensus 130 ~~~--~p~~~-~~~~~~~~~~g~~v~l~C~~--~g-~p-----~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~ 198 (283)
+.. .+.+. ..+....+..+..+.|.+.+ +| .| ..+++|+|++..+.... .+.+.....
T Consensus 86 VT~~a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgAq-----------~lT~sS~Ta 154 (304)
T 3shs_A 86 LMEEAELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTTQ-----------DITIQEFTA 154 (304)
T ss_dssp EECBCCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESSS-----------EEEECSCCG
T ss_pred EeccCceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCcc-----------ccceeeEEe
Confidence 111 22222 23444556677889999888 54 33 46999999998775322 367778888
Q ss_pred CCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEE
Q psy14060 199 EDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKIS 261 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~ 261 (283)
.++|.|+|.+.|..+....+....+.... .+.-........+..|+.+.|...+.
T Consensus 155 teaG~YtV~VTn~~~~c~~s~~~~i~~~~--------~~v~~~~~~~~~~~~~~~~~~~~~~~ 209 (304)
T 3shs_A 155 DKNGVYTVKVWGESEDSAASASTKIMLAT--------MNVDQDVVESKTVALGNEISLNYVVS 209 (304)
T ss_dssp GGCEEEEEEEESSSGGGCEEEEEEEEECE--------EEEEECCCSEEEEETTSCEEECCEEE
T ss_pred cCCeEEEEEEEcCCCCcccccceEEEEEc--------cccchhheEeehhhcCcEEEEEEEEe
Confidence 99999999999987743333333332211 01111122356788999999987764
No 439
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.43 E-value=1.4e-12 Score=98.70 Aligned_cols=149 Identities=11% Similarity=-0.003 Sum_probs=94.6
Q ss_pred eeecCcEEEEEEEccCc-cceEEeecCCCEEE-EEcCCEEEEEEccCCCCCCeEEEEEEEecce-eeeeeccCCCCCCe-
Q psy14060 60 IHTAKSQQVQKEKKGDK-EIVRKITATETTEM-EHKGKIQERVVDASELDDDGYYAITERKYYA-LSDLSEQKPAKPPV- 135 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~-~i~~~~~~~~~~~~-~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~-~~~~~~~~~~~~p~- 135 (283)
|.+|+++.|.|.+.... +...+.....+... ........|.|.+++. | |.|.|.+..... ......+.+..+|.
T Consensus 11 V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~~~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~~~~~~~l~V~~~P~~ 88 (185)
T 1iam_A 11 LPRGGSVLVTCSTSCDQPKLLGIETPLPKKELLLPGNNRKVYELSNVQE-D-SQPMCYSNCPDGQSTAKTFLTVYWTPER 88 (185)
T ss_dssp EETTEEEEEEEEECSSSCSEEEEECSSCEEEECSSSSSEEEEEEEEECS-C-BCCEEEEECSSCEEEEECEEEEEBCCSE
T ss_pred EeCCCCEEEEEEccCCCCccceEEeeCCCccEeccCCceeEEEEEecCc-C-CEEEEEEECCCCceEEEEEEEEeCCCCC
Confidence 77889999999997433 43233222222222 2223567789999973 4 999999865532 33444455544444
Q ss_pred EEecCCceeecCCCcEEEEEEEeee-cCC--EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGD-PLP--TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~-p~~--~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
....+....+.+|+.++|.|.+.|. |.. .|+|||++..+..... .......+|.+.....+|.+.|+|.|.|..
T Consensus 89 v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~~~~---~~~~~~~tl~~~~~reD~g~~~sC~A~~~l 165 (185)
T 1iam_A 89 VELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKREPA---VGEPAEVTTTVLVRRDHHGAQFSCRTELDL 165 (185)
T ss_dssp EEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEEEEC---CTTTEEEEEEEECCSSCSSCEEEEEEEEEC
T ss_pred CEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEcccccC---CCccccEEEEEeceeccCCCeEEEEEEecC
Confidence 3444555568999999999999884 543 5899999988753210 000112346666555555559999999876
Q ss_pred c
Q psy14060 213 G 213 (283)
Q Consensus 213 g 213 (283)
+
T Consensus 166 ~ 166 (185)
T 1iam_A 166 R 166 (185)
T ss_dssp G
T ss_pred c
Confidence 6
No 440
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.43 E-value=9.1e-13 Score=90.43 Aligned_cols=90 Identities=20% Similarity=0.268 Sum_probs=77.3
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
.+|.|...+....+..|+.+.|.|.+ +.|.+.+.|+|++..+....++.+...+....|.|.++..+|+|.|+|.
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~---- 81 (103)
T 2dku_A 7 GANCFTEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLLELRASGKHQPSQEGLTLRLTISALEKADSDTYTCD---- 81 (103)
T ss_dssp CCCCCSSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSCBCCSSSSEEEEEETTEEEEEEESCCTTTCSEEEEE----
T ss_pred CCCEeEecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCEECCCCCeEEEEeCCCEEEEEECCCCcccCEEEEEE----
Confidence 36777777788899999999999994 7788999999999999887788888777788999999999999999998
Q ss_pred CceeEEEEEEEEEec
Q psy14060 212 GGKAKCSANLVVEEK 226 (283)
Q Consensus 212 ~g~~~~~~~l~v~~~ 226 (283)
.|.....+.|.|...
T Consensus 82 ~g~~~~~~~l~V~~~ 96 (103)
T 2dku_A 82 IGQAQSRAQLLVQGR 96 (103)
T ss_dssp CSSCBCCEEEEEECS
T ss_pred eCCceEEEEEEEeCc
Confidence 566666788888763
No 441
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.41 E-value=2e-12 Score=89.34 Aligned_cols=93 Identities=12% Similarity=0.076 Sum_probs=72.9
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCE-ec-------CCCCCeEEEEe-CCEEEEEEcCCCCCCCE
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDF-PI-------TSSPDFQIHTF-STKSILIMRQVFMEDSG 202 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~-~~-------~~~~~~~~~~~-~~~~~l~i~~~~~~d~G 202 (283)
.+|.+...+....+..|+++.|.|.+.+.|.+.+.|++++. .+ ....++.+... ....+|.|.++..+|+|
T Consensus 5 ~~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~D~G 84 (108)
T 3m45_A 5 GSQGQFPLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPAQQTLYFDDKKALRDNRIELVRASWHELSISVSDVSLSDEG 84 (108)
T ss_dssp ---CCCEECCCEEEETTSCEEEEEEESSCSSCCEEEECTTCCEEEETTEECSCCTTEEEEEESSSEEEEEECSCCGGGCE
T ss_pred cCCCccccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCCCceEEEcCCcccccCcEEEeecCCCcEEEEECCCChhHCe
Confidence 45667777888999999999999999998989999999765 22 12235554433 24678999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEEEe
Q psy14060 203 VFAVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 203 ~Y~C~a~n~~g~~~~~~~l~v~~ 225 (283)
.|+|.+.| .+.....+.|.|..
T Consensus 85 ~Y~C~~~n-~~~~~~~~~L~V~~ 106 (108)
T 3m45_A 85 QYTCSLFT-MPVKTSKAYLTVLG 106 (108)
T ss_dssp EEEEEECS-SSCEEEEEEEEEEC
T ss_pred EEEEEEEc-CCCcEEEEEEEEEc
Confidence 99999999 88888888888874
No 442
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.40 E-value=7.8e-13 Score=107.69 Aligned_cols=132 Identities=14% Similarity=0.131 Sum_probs=86.8
Q ss_pred CCceeecCCCcEEEEEEEeee--cCCEEEEEeCCE--ecC-----------------CCCCeEEEE--eCCEEEEEEcCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGD--PLPTIKWFREDF--PIT-----------------SSPDFQIHT--FSTKSILIMRQV 196 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~~--~~~-----------------~~~~~~~~~--~~~~~~l~i~~~ 196 (283)
+....+.+|++++|.|.+.+. +.+.+.|||... ... ...++.+.. .....+|.|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 566789999999999999875 557899998421 100 012444442 234568999999
Q ss_pred CCCCCEEEEEEEEeC---------CceeEEEEEEEEEe-ccC----CCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe
Q psy14060 197 FMEDSGVFAVIAENR---------GGKAKCSANLVVEE-KRQ----GGRGGVVPPSFLTTISSAVINVGQLARFDAKISA 262 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~---------~g~~~~~~~l~v~~-~~~----~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g 262 (283)
..+|+|.|+|.+.|. .........|.|.. ... .......++.+...+. ..+.+|++++|.|.+.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~~~~~~~~~~~~~~~~~~~v~~~p~-~~v~~G~~v~L~C~~~~ 165 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSSGGGGSGGGGSGGGGIQPGLTQPPS-VSKGLRQTATLTCTGNS 165 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC--------------CCCSBBCCSE-EEECTTCCEEEEEECCC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcCCCCccCCCCCCceEeeeEEEeCCc-EEEecCCCEEEEEEecC
Confidence 999999999999886 11122234555543 000 0000002445555555 78999999999999988
Q ss_pred -eC-CCeeEEee
Q psy14060 263 -TK-PLDVYWLK 272 (283)
Q Consensus 263 -~p-~~~v~W~~ 272 (283)
.+ .+.+.|++
T Consensus 166 ~~~~~~~v~W~r 177 (280)
T 3fku_X 166 NNVGNQGAAWLQ 177 (280)
T ss_dssp CCCCTTCCEEEE
T ss_pred CCCCCceEEEEE
Confidence 44 36899998
No 443
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.40 E-value=7.1e-13 Score=90.33 Aligned_cols=81 Identities=16% Similarity=0.334 Sum_probs=67.7
Q ss_pred CCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSA 219 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~ 219 (283)
+....+..|+.+.|.|.+.+.| |.+.|+|++..+....++.+. ...|.|.++..+|+|.|+|.+.|..|.....+
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~~~~~~~~~~~~----~~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~~~ 84 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGVQLAESNRTRIT----GEEVEVQDSVPADSGLYACVTSSPSGSDTTYF 84 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSSBCCCCSSEEEC----SSEEEETTCCTTTCEEEEEEEEETTEEEEEEE
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCEECCCCCcEEEE----CCEEEEccCCHHHCEEEEEEEEeCCceEEEEE
Confidence 3446778999999999999866 799999999888766565543 24799999999999999999999999988777
Q ss_pred EEEEEe
Q psy14060 220 NLVVEE 225 (283)
Q Consensus 220 ~l~v~~ 225 (283)
.|.|..
T Consensus 85 ~l~V~~ 90 (99)
T 2cr3_A 85 SVNVSD 90 (99)
T ss_dssp EECBCS
T ss_pred EEEEec
Confidence 777765
No 444
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.40 E-value=3.8e-12 Score=88.34 Aligned_cols=93 Identities=16% Similarity=0.260 Sum_probs=71.0
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeee--cCCEEEEEeCCEecCCCCCeEEEEeC--------CEEEEEEcCCCCCC
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGD--PLPTIKWFREDFPITSSPDFQIHTFS--------TKSILIMRQVFMED 200 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~~~~~~~~~~~~~~~~--------~~~~l~i~~~~~~d 200 (283)
..+|.+...+....+..|+.+.|.|.+.+. +.+.+.|+|++..+............ ....|.|.++..+|
T Consensus 8 ~~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D 87 (112)
T 3so5_A 8 FPXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDNEALQDAEMENYAHLRAQGGELMEYTTILRLRNVEFTS 87 (112)
T ss_dssp CCSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETTEECTTCEEEEEEETTGGGSSCEEEEEEEEECSCCGGG
T ss_pred CCCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCCcccccccccceeeeeccCCCccccceEEEEecccccc
Confidence 457888888888899999999999999865 45899999999987653211111110 13579999999999
Q ss_pred CEEEEEEEEeCCcee-EEEEEEEE
Q psy14060 201 SGVFAVIAENRGGKA-KCSANLVV 223 (283)
Q Consensus 201 ~G~Y~C~a~n~~g~~-~~~~~l~v 223 (283)
+|.|+|.+.|..|.. +..+.|.|
T Consensus 88 ~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 88 EGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEE
T ss_pred CCeEEEEEEeCCCcEEEeEEEEEe
Confidence 999999999999873 45566654
No 445
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.40 E-value=3.2e-12 Score=90.47 Aligned_cols=86 Identities=13% Similarity=-0.007 Sum_probs=65.4
Q ss_pred CCceeecCCCcEEEEEEEeeec--CCEEEEEeCCEecC-----CCCCeEEEEe---CCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LPTIKWFREDFPIT-----SSPDFQIHTF---STKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~~~~~-----~~~~~~~~~~---~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
+....+..|+.+.|.|.+.|.| .+.+.|++++..+. .......... .....|.|.++..+|+|.|+|.|.
T Consensus 15 ~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 94 (122)
T 3s35_X 15 SHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLYTCAAS 94 (122)
T ss_dssp CSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTTCCHHHHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcccCCceeeeeccccccCCceeeEEEEEEECCCCcccCEEEEEEEc
Confidence 3445788999999999999844 47899999887432 1111111111 134579999999999999999999
Q ss_pred eCCceeEEEEEEEEEe
Q psy14060 210 NRGGKAKCSANLVVEE 225 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~ 225 (283)
|..|.....+.|.|.+
T Consensus 95 n~~g~~~~~~~l~V~~ 110 (122)
T 3s35_X 95 SGLMTKKNSTFVRVHE 110 (122)
T ss_dssp CSSCEEEEEEEEEEEE
T ss_pred cCCCceEEEEEEEEec
Confidence 9999999889999886
No 446
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.39 E-value=4.5e-12 Score=101.31 Aligned_cols=133 Identities=15% Similarity=0.151 Sum_probs=84.6
Q ss_pred ecCCceeecCCCcEEEEEEEee--ecCCEEEEEeCC--E---ec---C-----------CCCCeEEEEe--CCEEEEEEc
Q psy14060 138 KKIQPCRAFEQDQARFEVEFDG--DPLPTIKWFRED--F---PI---T-----------SSPDFQIHTF--STKSILIMR 194 (283)
Q Consensus 138 ~~~~~~~~~~g~~v~l~C~~~g--~p~~~~~W~k~~--~---~~---~-----------~~~~~~~~~~--~~~~~l~i~ 194 (283)
..+....+.+|++++|.|.+.+ .+...+.|||.. . .+ . ...++.+... ....+|.|.
T Consensus 4 ~~~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 83 (248)
T 3u2s_H 4 VESGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMN 83 (248)
T ss_dssp EEECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred ecCCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEEC
Confidence 3456678899999999999975 245689999742 1 11 0 1235555443 346689999
Q ss_pred CCCCCCCEEEEEEEEeCCc----------------------eeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCC
Q psy14060 195 QVFMEDSGVFAVIAENRGG----------------------KAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQ 252 (283)
Q Consensus 195 ~~~~~d~G~Y~C~a~n~~g----------------------~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~ 252 (283)
++..+|+|.|.|.+.+..+ .......+.|.... ..+|.+........+..|+
T Consensus 84 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~------~~~P~v~~~~~~~~~~~g~ 157 (248)
T 3u2s_H 84 SLRVEDTATYFCVREAGGPDYRNGYNYYDFYDGYYNYHYMDVWGKGTTVTVSSAS------TKGPSVFPLAPSSKSTSGG 157 (248)
T ss_dssp SCCGGGCEEEEEEEEEEECEEETTEEEECGGGCCEEEEEEEEECCCEEEEECSCC------CBCCEEEEECCC------C
T ss_pred CCCHHHCEEEEEEEeCCCCccccccccccccccccccccceeeCCCEEEEEcccC------CCCCEEEEeCCCccccCCC
Confidence 9999999999999987421 11112455554211 1356665444445566799
Q ss_pred eEEEEEEEEee-C-CCeeEEeeCCEE
Q psy14060 253 LARFDAKISAT-K-PLDVYWLKVSSL 276 (283)
Q Consensus 253 ~v~L~C~~~g~-p-~~~v~W~~~g~~ 276 (283)
.++|.|.+.+. | .+.+.|+++|..
T Consensus 158 ~~~L~C~~~~~~P~~~~v~W~~~g~~ 183 (248)
T 3u2s_H 158 TAALGCLVKDYFPEPVTVSWNSGALT 183 (248)
T ss_dssp EEEEEEEEEEEBSSCCEEEEGGGTBC
T ss_pred cEEEEEEEeeEECCCeEEEEeECCcc
Confidence 99999999984 4 346999999864
No 447
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.38 E-value=5.3e-12 Score=100.32 Aligned_cols=133 Identities=13% Similarity=0.098 Sum_probs=86.2
Q ss_pred cCCceeecCCCcEEEEEEEeeec----CCEEEEEeCC--E---ec---C----------------CCCCeEEEEe--CCE
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDP----LPTIKWFRED--F---PI---T----------------SSPDFQIHTF--STK 188 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p----~~~~~W~k~~--~---~~---~----------------~~~~~~~~~~--~~~ 188 (283)
.+....+.+|++++|.|.+.+.+ ...+.|||.. . .+ . ...++.+... ...
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~ 85 (239)
T 3tv3_H 6 ESGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNL 85 (239)
T ss_dssp EESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTE
T ss_pred cCCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCE
Confidence 34567889999999999998755 3489999842 1 11 0 0123444332 345
Q ss_pred EEEEEcCCCCCCCEEEEEEEEeCCc-----------e--eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEE
Q psy14060 189 SILIMRQVFMEDSGVFAVIAENRGG-----------K--AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLAR 255 (283)
Q Consensus 189 ~~l~i~~~~~~d~G~Y~C~a~n~~g-----------~--~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~ 255 (283)
.+|.|.++..+|+|.|+|.+.+..+ . ......+.|.... ..+|.+........+..|+.+.
T Consensus 86 ~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~w~~~~~~~~~~~~t~l~V~~~~------~~~P~v~~~~~~~~~~~g~~v~ 159 (239)
T 3tv3_H 86 VFLKLNSVTAADTATYYCARFGGEVLRYTDWPKPAWVDLWGRGTLVTVSSAS------TKGPSVFPLAPSSKSTSGGTAA 159 (239)
T ss_dssp EEEEECSCCGGGCEEEEEEEEEEECSSCSSSCEEEEEEEECCCEEEEECCCC------CBCCEEEEECCCCCC--TTEEE
T ss_pred EEEEECCCChhhCEEEEEEEecCccccccccccccceeeeCCCcEEeeccCC------CcCCEEEEECCChhhccCCcEE
Confidence 6799999999999999999986531 0 1112345554211 1356666444444556799999
Q ss_pred EEEEEEee-CCC-eeEEeeCCEEe
Q psy14060 256 FDAKISAT-KPL-DVYWLKVSSLS 277 (283)
Q Consensus 256 L~C~~~g~-p~~-~v~W~~~g~~l 277 (283)
|.|.+.+. |.+ .+.|+++|..+
T Consensus 160 l~C~~~~~~p~~~~v~W~~~g~~~ 183 (239)
T 3tv3_H 160 LGCLVKDYFPEPVTVSWNSGALTS 183 (239)
T ss_dssp EEEEEEEEBSSCCEEEEGGGTBCT
T ss_pred EEEEEeeEeCCCeEEEEEECCccC
Confidence 99999984 434 48899999643
No 448
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.37 E-value=6.7e-12 Score=99.16 Aligned_cols=131 Identities=15% Similarity=0.157 Sum_probs=82.1
Q ss_pred CCceeecCCCcEEEEEEEeeec--CC--EEEEEeCCE-----ec-----CC-----------CCCeEEEEe--CCEEEEE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDP--LP--TIKWFREDF-----PI-----TS-----------SPDFQIHTF--STKSILI 192 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p--~~--~~~W~k~~~-----~~-----~~-----------~~~~~~~~~--~~~~~l~ 192 (283)
+....+.+|++++|.|.+.+.+ .. .+.|||... .+ .. ..++.+... ....+|.
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 86 (232)
T 3qhz_H 7 SGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVLT 86 (232)
T ss_dssp ECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEEE
T ss_pred CCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEEE
Confidence 3456789999999999997632 23 349997421 11 00 135555443 3566899
Q ss_pred EcCCCCCCCEEEEEEEEeCC--------ceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeC
Q psy14060 193 MRQVFMEDSGVFAVIAENRG--------GKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATK 264 (283)
Q Consensus 193 i~~~~~~d~G~Y~C~a~n~~--------g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p 264 (283)
|.++..+|+|.|.|.+.+.. ........+.|.... ..+|.+........+..|+.++|.|.+.+.+
T Consensus 87 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~ 160 (232)
T 3qhz_H 87 MTNMDPVDTATYYCARTLRVSGDYVRDFDLWGRGTLVTVSSAS------TKGPSVFPLAPSSKSTSGGTAALGCLVKDYF 160 (232)
T ss_dssp ECSCCGGGCEEEEEEEECCC---CCCCCCEECCCEEEEECSSC------CBCCEEEEECC-------CEEEEEEEEEEEB
T ss_pred ECcCChhhCEEEEEEEeeccCccccccceeeCCCeEEEEecCC------CCCCEEEEecccccccCCCcEEEEEEEeeEe
Confidence 99999999999999998763 112222455554211 1356666444444566799999999999865
Q ss_pred CC--eeEEeeCCEE
Q psy14060 265 PL--DVYWLKVSSL 276 (283)
Q Consensus 265 ~~--~v~W~~~g~~ 276 (283)
++ .+.|+++|..
T Consensus 161 P~~~~v~W~~~g~~ 174 (232)
T 3qhz_H 161 PEPVTVSWNSGALT 174 (232)
T ss_dssp SSCCEEEEGGGTBC
T ss_pred CCCeEEEEEECCEe
Confidence 43 5789999964
No 449
>4acp_A IG gamma-1 chain C region; immune system, antibody, kifunensine; HET: NAG; 2.49A {Homo sapiens} PDB: 2j6e_A*
Probab=99.36 E-value=1.2e-12 Score=103.95 Aligned_cols=153 Identities=10% Similarity=0.054 Sum_probs=91.7
Q ss_pred eeecCcEEEEEEEccC---c-cce-EEeecCCCE--------EEEEcC---CEEEEEEccCCCCCCeEEEEEEEeccee-
Q psy14060 60 IHTAKSQQVQKEKKGD---K-EIV-RKITATETT--------EMEHKG---KIQERVVDASELDDDGYYAITERKYYAL- 122 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~---~-~i~-~~~~~~~~~--------~~~~~~---~~~~L~i~~~~~~D~G~Y~C~a~n~~~~- 122 (283)
+..|+.++|.|.+.|. | .++ .|...+... ....++ ....|.|.....+|.|.|+|.+.+..+.
T Consensus 36 l~~g~~~~L~C~v~g~~p~P~~i~v~W~k~g~~l~~~~~~~~~~~~~g~~~~~s~L~i~~~~~~d~~~YtC~v~h~~~~~ 115 (240)
T 4acp_A 36 LMISRTPEVTCVVVDVSHEDPEVKFNWYVDGVEVHNAKTKPREEQYNSTYRVVSVLTVLHQDWLNGKEYKCKVSNKALPA 115 (240)
T ss_dssp HSSSSCCEEEEEEESCCC--CCCEEEEEETTEEECCCEECCCEEC---CEEEEEEEECCHHHHHHTCCEEEEEECC----
T ss_pred cccCCCcEEEEEEeccccCCCccEEEEEECCcccCCceeccceECCCCeEEEEEEEEEechhccCCCEEEEEEEcCCCCc
Confidence 3358899999999986 3 333 443332211 001111 1246778777777899999999988652
Q ss_pred --eeeec--cCCCCCCeEEecCCceeecCCCcEEEEEEEee-ecCC-EEEEEeCCEecCCCCCeEEEEe--CC---EEEE
Q psy14060 123 --SDLSE--QKPAKPPVFTKKIQPCRAFEQDQARFEVEFDG-DPLP-TIKWFREDFPITSSPDFQIHTF--ST---KSIL 191 (283)
Q Consensus 123 --~~~~~--~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g-~p~~-~~~W~k~~~~~~~~~~~~~~~~--~~---~~~l 191 (283)
..... +....+|.+...+.......|+.+.|.|.+.+ +|.+ .+.|+|++..+........... +. .+.|
T Consensus 116 ~~~~~i~~~~~~~~~P~V~v~~~~~~~~~g~~~~L~C~~~gf~P~~i~v~W~k~g~~~~~~~~~~~~~~~dgt~~~~s~L 195 (240)
T 4acp_A 116 PIEKTISKAKGQPREPQVYTLPPSRDELTKNQVSLTCLVKGFYPSDIAVEWESNGQPENNYKATPPVLDSDGSFFLYSKL 195 (240)
T ss_dssp CEEEEECCCCSCCBCCEEEEECCCGGGGGSSEEEEEEEEEEEBSSCCEEEEEETTEECSSEEECCCEECTTSCEEEEEEE
T ss_pred cccccccccCCCCCCCEEEEECCChHHhcCCceEEEEEEeEEeCCCcEEEEEECCEECCCcCccCceECCCCCEEEEEEE
Confidence 11121 23445777665544443345889999999998 4554 8999999988643111101111 11 2346
Q ss_pred EEcCCCCCCCEEEEEEEEeCC
Q psy14060 192 IMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 192 ~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
.+......+.|.|+|.+.|..
T Consensus 196 ~v~~~~~~~~~~ytC~V~h~~ 216 (240)
T 4acp_A 196 TVDKSRWQQGNVFSCSVMHEA 216 (240)
T ss_dssp EEEHHHHHTTCCEEEEEECTT
T ss_pred EEChHHhCCCCEEEEEEEECC
Confidence 666555567899999999875
No 450
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.36 E-value=7.2e-14 Score=109.23 Aligned_cols=135 Identities=15% Similarity=0.064 Sum_probs=87.3
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecC---CEEEEEeCCEecCCCC-CeEE-EEe---CCEEEEEEcCCCCCCCEEEEEE
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPL---PTIKWFREDFPITSSP-DFQI-HTF---STKSILIMRQVFMEDSGVFAVI 207 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~---~~~~W~k~~~~~~~~~-~~~~-~~~---~~~~~l~i~~~~~~d~G~Y~C~ 207 (283)
++..+....+..|+.++|.|.+.+.+. +.+.| + +..+.... .... ... .....|.|.++..+|.|.|+|.
T Consensus 7 ~~~~P~~~~v~~G~~v~L~C~~~g~~p~~~~~v~W-~-~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~ 84 (214)
T 1ow0_A 7 SLHRPALEDLLLGSEANLTCTLTGLRDASGVTFTW-T-PSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCT 84 (214)
T ss_dssp EEECCCHHHHHHCSSCCCEEEETTCCSCCCCCCCB-S-SCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEE
T ss_pred EEECcChHHhccCCCcEEEEEEeeeECCCCeEEEE-c-CCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEE
Confidence 344566777889999999999998754 68999 4 33332110 0000 000 0234577778888899999999
Q ss_pred EEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecC-CceEEcCCCeEEEEEEEEee-CC-CeeEEeeCCEEecC
Q psy14060 208 AENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTI-SSAVINVGQLARFDAKISAT-KP-LDVYWLKVSSLSDV 279 (283)
Q Consensus 208 a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~-~~~~v~~g~~v~L~C~~~g~-p~-~~v~W~~~g~~l~~ 279 (283)
+.|..+.......+.+... ..+|.+...+ ....+..|+.+.|.|.+.|. |. +.|.|++||+.+..
T Consensus 85 ~~~~~~~~~~~~~i~~~~~-------~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~ 152 (214)
T 1ow0_A 85 AAYPESKTPLTATLSKSGN-------TFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPR 152 (214)
T ss_dssp ECCSSCSSCEEEEEECCSS-------CCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCG
T ss_pred EecCCCCCceeEeeccCCC-------CCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCC
Confidence 9998764333333322111 1467664433 33346789999999999996 43 38999999998754
No 451
>1ow0_A IG alpha-1 chain C region; IGA1, fcari, CD89, antibody, immunoglobulin-LIK immune system; HET: NAG FUL BMA GAL SIA FUC MAN NDG; 3.10A {Homo sapiens} SCOP: b.1.1.2 b.1.1.2 PDB: 2qej_A*
Probab=99.36 E-value=2e-13 Score=106.74 Aligned_cols=153 Identities=9% Similarity=0.027 Sum_probs=95.0
Q ss_pred eeecCcEEEEEEEccCcc---ce-EEeecCCCEE------E-EEcC---CEEEEEEccCCCCCCeEEEEEEEecceee--
Q psy14060 60 IHTAKSQQVQKEKKGDKE---IV-RKITATETTE------M-EHKG---KIQERVVDASELDDDGYYAITERKYYALS-- 123 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~~---i~-~~~~~~~~~~------~-~~~~---~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~-- 123 (283)
+.+|+.++|.|.+.|.+. +. .| ....... . ...+ ....|.|.+++.+|+|.|+|.+.|..+..
T Consensus 16 v~~G~~v~L~C~~~g~~p~~~~~v~W-~~~~~~~~~~~~~~~~~~g~~~~~~~L~I~~~~~~D~g~Y~C~~~~~~~~~~~ 94 (214)
T 1ow0_A 16 LLLGSEANLTCTLTGLRDASGVTFTW-TPSSGKSAVQGPPERDLCGCYSVSSVLPGCAEPWNHGKTFTCTAAYPESKTPL 94 (214)
T ss_dssp HHHCSSCCCEEEETTCCSCCCCCCCB-SSCSSCCCEECCCCCCSTTCCCEEEECTTTHHHHHHTCEEEEEECCSSCSSCE
T ss_pred hccCCCcEEEEEEeeeECCCCeEEEE-cCCCCCCcccCCceECCCCcEEEEEEEEEeHHHcCCCCeEEEEEecCCCCCce
Confidence 567889999999998742 22 33 2111000 0 0011 34578899999999999999999876521
Q ss_pred -eeec-cCCCCCCeEEecC-CceeecCCCcEEEEEEEeee-cC-CEEEEEeCCEecCCCCCeE--EEEe----CC----E
Q psy14060 124 -DLSE-QKPAKPPVFTKKI-QPCRAFEQDQARFEVEFDGD-PL-PTIKWFREDFPITSSPDFQ--IHTF----ST----K 188 (283)
Q Consensus 124 -~~~~-~~~~~~p~~~~~~-~~~~~~~g~~v~l~C~~~g~-p~-~~~~W~k~~~~~~~~~~~~--~~~~----~~----~ 188 (283)
.... +.+..+|.+.... ....+..|+.+.|.|.+.|. |. +.+.|+|++..+....... .... +. .
T Consensus 95 ~~~i~~~~~~~~P~v~~~~~~~~~~~~g~~~~L~C~~~g~~P~~~~v~W~k~g~~l~~~~~~~~~~~~~~~~~dgt~~~~ 174 (214)
T 1ow0_A 95 TATLSKSGNTFRPEVHLLPPPSEELALNELVTLTCLARGFSPKDVLVRWLQGSQELPREKYLTWASRQEPSQGTTTFAVT 174 (214)
T ss_dssp EEEEECCSSCCCCEEEEECCCTTTTTSSSEEEEEEEEEEESSSCCEEEEEETTEECCGGGSEECCCEECSCSSSCCEEEE
T ss_pred eEeeccCCCCCCCEEEecCCCHHHhccCCceEEEEEEeeeECCCcEEEEEECCEECCCCceeecCCcccccCCCCcEEEE
Confidence 1111 2445677664433 33346678899999999985 54 5999999998876532111 1111 11 1
Q ss_pred EEEEEcCCCCCCCEEEEEEEEeCCc
Q psy14060 189 SILIMRQVFMEDSGVFAVIAENRGG 213 (283)
Q Consensus 189 ~~l~i~~~~~~d~G~Y~C~a~n~~g 213 (283)
+.|.+......+.|.|+|.+.|...
T Consensus 175 s~l~v~~~~~~~~~~ytC~v~n~~l 199 (214)
T 1ow0_A 175 SILRVAAEDWKKGDTFSCMVGHEAL 199 (214)
T ss_dssp EEEEEEHHHHHHTCCEEEEEECTTC
T ss_pred EEEEECHHHccCCCEEEEEEECCCC
Confidence 2344444433458999999999763
No 452
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.35 E-value=6.6e-12 Score=90.82 Aligned_cols=86 Identities=19% Similarity=0.308 Sum_probs=67.8
Q ss_pred CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCC----------CCeEEEE---eCCEEEEEEcCC
Q psy14060 130 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS----------PDFQIHT---FSTKSILIMRQV 196 (283)
Q Consensus 130 ~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~----------~~~~~~~---~~~~~~l~i~~~ 196 (283)
...+|.|...+....+..|+.+.|.|.+.|.|.|.+.|++++..+... .++.+.. ......|.|.++
T Consensus 18 ~~~pP~~~~~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 18 GSHMAGFVQAPLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICSQLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp ---CCEEEECCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCEECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCCCeEEcCCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccceeecccCcccceEEecccccccceEEEECCC
Confidence 356899999999999999999999999999999999999987655321 1233321 112457999999
Q ss_pred CCCCCEEEEEEEEeCCcee
Q psy14060 197 FMEDSGVFAVIAENRGGKA 215 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~g~~ 215 (283)
..+|+|.|+|.|.|..|..
T Consensus 98 ~~~D~G~Y~C~a~N~~G~~ 116 (137)
T 3qr2_A 98 VEEDTGTYECRASNDPDRN 116 (137)
T ss_dssp CGGGCEEEEEEEECCTTSS
T ss_pred CcccCEEEEEEEEecCCcc
Confidence 9999999999999998875
No 453
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.35 E-value=6.4e-12 Score=89.30 Aligned_cols=86 Identities=9% Similarity=0.159 Sum_probs=69.0
Q ss_pred cCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEec--------CCCCCeEEE-EeCCEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPI--------TSSPDFQIH-TFSTKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~--------~~~~~~~~~-~~~~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
.+..+.+.+|++++|.|.+.+.|.+.+.|++.+..+ ....++.+. ......+|.|.++..+|+|.|+|.+.
T Consensus 7 ~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y~C~a~ 86 (124)
T 3rbg_A 7 HTETITVEEGQTLTLKCVTSLRKNSSLQWLTPSGFTIFLNEYPVLKNSKYQLLHHSANQLSITVPNVTLQDEGVYKCLHY 86 (124)
T ss_dssp SEEEEEEETTSCEEEEEECCCCTTCEEEEECTTSCEEEETTEECSCSSCCEEEEEETTEEEEEESSCCGGGCEEEEEEEE
T ss_pred CCccEEEcCCCCEEEEeEEeccCCCEEEEECCCCeEEEEeccccccCCcEEEEeCCCCEEEEEECCCChHHCEEEEEEEE
Confidence 345678899999999999999999999999865532 133444443 23456789999999999999999999
Q ss_pred eCCceeEEEEEEEEEe
Q psy14060 210 NRGGKAKCSANLVVEE 225 (283)
Q Consensus 210 n~~g~~~~~~~l~v~~ 225 (283)
|. +.....+.|.|..
T Consensus 87 n~-g~~~~~~~l~V~~ 101 (124)
T 3rbg_A 87 SD-SVSTKEVKVIVLA 101 (124)
T ss_dssp SS-SEEEEEEEEEEEC
T ss_pred cC-CCCcEEEEEEEEe
Confidence 99 8888888998885
No 454
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.35 E-value=4.9e-12 Score=85.37 Aligned_cols=81 Identities=11% Similarity=0.173 Sum_probs=68.0
Q ss_pred cCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEE
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCS 218 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~ 218 (283)
.+....+..|+.+.|.|.+.+ .|.+.|+|++..+....++.+. . ..|.|.++..+|+|.|+|.+.|..|.....
T Consensus 7 ~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~g~~~~~~~~~~~~--~--~~L~i~~~~~~D~G~Y~C~a~n~~g~~~~~ 80 (95)
T 4hwu_A 7 QPEAYVVAPGESLELQCMLKD--AAVISWTKDGVHLGPNNRTVLI--G--EYLQIKGATPRDSGLYACTAARTVDSETWI 80 (95)
T ss_dssp -CEEEEECTTSCEEEECCCCT--TCEEEEEETTEEECCCSSEEEE--T--TEEEECSCCGGGCEEEEEEEECSSCEEEEE
T ss_pred CCCcEEECCCCEEEEEEEeCC--CCEEEEEECCEECCCCceEEEe--C--CEEEECcCCcccCEEEEEEEccCCCcEEEE
Confidence 445677899999999999986 5899999999998776665543 2 369999999999999999999999988888
Q ss_pred EEEEEEe
Q psy14060 219 ANLVVEE 225 (283)
Q Consensus 219 ~~l~v~~ 225 (283)
+.|.|.+
T Consensus 81 ~~l~V~~ 87 (95)
T 4hwu_A 81 FMVNVTD 87 (95)
T ss_dssp EEEEECC
T ss_pred EEEEEeC
Confidence 8888875
No 455
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.34 E-value=5.3e-12 Score=85.68 Aligned_cols=81 Identities=20% Similarity=0.196 Sum_probs=63.8
Q ss_pred cCCceeecCCCcEEEEEEEe-eecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEE
Q psy14060 139 KIQPCRAFEQDQARFEVEFD-GDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC 217 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~-g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~ 217 (283)
.+....+..|+.+.|.|.+. +.|.+.+.|+|++....... ..... ..|.|.++..+|+|.|+|.+.|..|....
T Consensus 16 ~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~~~~--~~~~~---~~L~i~~v~~~D~G~Y~C~a~n~~g~~~~ 90 (98)
T 1gl4_B 16 EQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSR--AMDFN---GILTIRNVQPSDAGTYVCTGSNMFAMDQG 90 (98)
T ss_dssp SCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCCCTT--EEEET---TEEEECSCCGGGCEEEEEEEECSSCEEEE
T ss_pred CCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCCCce--eecCC---CEEEEeCCChhhCEEEEEEecCCCCcccc
Confidence 34566899999999999998 57899999999854433321 12221 26999999999999999999999999888
Q ss_pred EEEEEEE
Q psy14060 218 SANLVVE 224 (283)
Q Consensus 218 ~~~l~v~ 224 (283)
.+.|.|.
T Consensus 91 ~~~l~V~ 97 (98)
T 1gl4_B 91 TATLHVQ 97 (98)
T ss_dssp EEEEEEC
T ss_pred EEEEEEe
Confidence 8877764
No 456
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.33 E-value=2.1e-11 Score=108.80 Aligned_cols=92 Identities=22% Similarity=0.246 Sum_probs=86.1
Q ss_pred CCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 132 ~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
..|.+...+....+..|+++.|.|.+.|.|.|.++|+|++..+..+.++.+...+..++|.|.++...|+|.|+|.|.|.
T Consensus 481 ~~P~~~~~~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~~el~~s~~~~i~~~~~~~~L~I~~~~~~D~G~Yt~~A~N~ 560 (573)
T 3uto_A 481 AQPRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTINRVKGDDKGEYTVRAKNS 560 (573)
T ss_dssp GSCEEEECCCCEEECTTSCEEEEEEEECSSCCEEEEEETTEECCSSSSEEEEEETTEEEEEECSCCGGGCEEEEEEEEET
T ss_pred cCCccccCCCCcEEeCCCcEEEEEEEEccCCCeEEEEECCEEcccCCcEEEEEcCCEEEEEEcCCCcccCcEEEEEEEeC
Confidence 35777888888899999999999999999999999999999999988999999999999999999999999999999999
Q ss_pred CceeEEEEEEEE
Q psy14060 212 GGKAKCSANLVV 223 (283)
Q Consensus 212 ~g~~~~~~~l~v 223 (283)
.|..+..+.|.|
T Consensus 561 ~G~~~~~v~l~V 572 (573)
T 3uto_A 561 YGTKEEIVFLNV 572 (573)
T ss_dssp TEEEEEEEEEEE
T ss_pred CCcEEEEEEEEE
Confidence 999999988877
No 457
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.32 E-value=2.1e-11 Score=94.69 Aligned_cols=128 Identities=16% Similarity=0.167 Sum_probs=84.2
Q ss_pred EecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--E---ecC-------CCCCeEEEEe---CCEEEEEEcCCCCCCC
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--F---PIT-------SSPDFQIHTF---STKSILIMRQVFMEDS 201 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~---~~~-------~~~~~~~~~~---~~~~~l~i~~~~~~d~ 201 (283)
...+..+.+..|+++.|.|.+.+.+ +.+.|||.. . .+. ...++.+... ....+|.|.++..+|+
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~ 83 (207)
T 1ypz_E 5 EQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS 83 (207)
T ss_dssp EESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC
T ss_pred EECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC
Confidence 4456667899999999999998643 589999853 1 110 1245555544 4557899999999999
Q ss_pred EEEEEEEEeCCc---------e--eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CC-Cee
Q psy14060 202 GVFAVIAENRGG---------K--AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KP-LDV 268 (283)
Q Consensus 202 G~Y~C~a~n~~g---------~--~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~-~~v 268 (283)
|.|+|.+.+..+ . ......|.|..... ...+|.+... .+ .+.|.|.+.+. |. +.+
T Consensus 84 G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~~~~----~~~~P~v~~~-------~~-~~~l~C~~~g~~P~~~~v 151 (207)
T 1ypz_E 84 GTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEPKSQ----PPAKPSVFIM-------KN-GTNVACLVKDFYPKEVTI 151 (207)
T ss_dssp EEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEECCCC----CCCCCEEEEE-------EE-TTEEEEEEEEESSSCCEE
T ss_pred EEEEEEEecCCcccccccccceeeecCccEEEEccCCC----CCCCCeEEEe-------CC-CCeEEEEEeeEeCCCeEE
Confidence 999999988642 1 11235677764210 0023433321 11 26899999986 43 689
Q ss_pred EEeeCCEEec
Q psy14060 269 YWLKVSSLSD 278 (283)
Q Consensus 269 ~W~~~g~~l~ 278 (283)
.|+++ +.+.
T Consensus 152 ~W~~~-~~l~ 160 (207)
T 1ypz_E 152 SLRSS-KKIV 160 (207)
T ss_dssp EEECS-SEEE
T ss_pred EEecC-Cccc
Confidence 99999 6654
No 458
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.32 E-value=1.1e-12 Score=88.85 Aligned_cols=82 Identities=16% Similarity=0.355 Sum_probs=66.5
Q ss_pred CCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 131 AKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 131 ~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
..+|.+...+....+..|+.+.|.|.+.+.|.+.+.|+|++..+.... ...|.|.++..+|+|.|+|.+.|
T Consensus 8 ~~~~~i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~~~~~~~~---------~~~L~i~~v~~~d~G~Y~C~a~n 78 (96)
T 2ens_A 8 LEEVQLVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDGVPLPLPP---------SPVLILPEIGPQDQGTYSCVATH 78 (96)
T ss_dssp CCSCCCEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESSSBCSSCC---------CSEEEEESCCTTTCEEEECEECC
T ss_pred CCCCEEEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECCEECcCCC---------CCEEEECCCCcccCEEEEEEEEe
Confidence 346677777778889999999999999999999999999998876532 23699999999999999999999
Q ss_pred CCceeEEEEEE
Q psy14060 211 RGGKAKCSANL 221 (283)
Q Consensus 211 ~~g~~~~~~~l 221 (283)
..+....+..+
T Consensus 79 ~~~~~~~s~~~ 89 (96)
T 2ens_A 79 SSHGPQESRAV 89 (96)
T ss_dssp SSCCCEECCCE
T ss_pred CCCCcEEEEEE
Confidence 76554444333
No 459
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.30 E-value=7.5e-12 Score=85.62 Aligned_cols=80 Identities=16% Similarity=0.294 Sum_probs=67.6
Q ss_pred CceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEE
Q psy14060 141 QPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSAN 220 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~ 220 (283)
....+..|+.+.|.|.+. .|.+.+.|+|++..+....++.+...+....|.|.++..+|+|.|+|.+.| ....+.
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g~~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~~----~~~~~~ 93 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDGKKLSSSSKVRVEAVGCTRRLVVQQAGQAEAGEYSCEAGG----QQLSFR 93 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETTEECCCCSSEEEEEETTEEEEEETTCCTTTCSCEEEEETT----EECCEE
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECCEECCCCCCEEEEEcCCEEEEEECCCCcccCEEEEEEcCC----CcEEEE
Confidence 345788999999999998 788999999999999877788888777778999999999999999999843 345577
Q ss_pred EEEEe
Q psy14060 221 LVVEE 225 (283)
Q Consensus 221 l~v~~ 225 (283)
|.|..
T Consensus 94 l~V~~ 98 (102)
T 2eo1_A 94 LQVAG 98 (102)
T ss_dssp EEEES
T ss_pred EEEeC
Confidence 77764
No 460
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.30 E-value=1.4e-11 Score=90.09 Aligned_cols=89 Identities=9% Similarity=0.072 Sum_probs=70.1
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEE---------eCCEecCCCCCeEEEE-eCCEEEEEEcCCCCCCCEEE
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWF---------REDFPITSSPDFQIHT-FSTKSILIMRQVFMEDSGVF 204 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~---------k~~~~~~~~~~~~~~~-~~~~~~l~i~~~~~~d~G~Y 204 (283)
.+...+....+..|+++.|.|.+.+.|.+.+.|+ +++..+. ..++.+.. .....+|.|.++..+|+|.|
T Consensus 40 ~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i~~~~~~~~~-~~r~~~~~~~~~~~~L~I~~v~~~DsG~Y 118 (145)
T 1z9m_A 40 DSQPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTLYFGEKRALR-DNRIQLVTSTPHELSISISNVALADEGEY 118 (145)
T ss_dssp TTCCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEEEETTEECSC-CTTEEEEEECSSEEEEEECSCCGGGCEEE
T ss_pred ceecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEEEECCceecc-cCCEEEecCCCCeEEEEECCCChhhCEEE
Confidence 3345567788999999999999999888999999 4443333 34555432 33456899999999999999
Q ss_pred EEEEEeCCceeEEEEEEEEEe
Q psy14060 205 AVIAENRGGKAKCSANLVVEE 225 (283)
Q Consensus 205 ~C~a~n~~g~~~~~~~l~v~~ 225 (283)
+|.+.|. +.....+.|.|..
T Consensus 119 ~C~~~n~-~~~~~~~~L~V~~ 138 (145)
T 1z9m_A 119 TCSIFTM-PVRTAKSLVTVLG 138 (145)
T ss_dssp EEEECSS-SCEEEEEEEEEEC
T ss_pred EEEEEcC-CCceEEEEEEEEe
Confidence 9999999 8888888888885
No 461
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.28 E-value=6.7e-11 Score=95.54 Aligned_cols=160 Identities=11% Similarity=0.136 Sum_probs=95.3
Q ss_pred eeecCcEEEEEEEccCc----cce----------EEe--------------ecCCCEEEEEc--CCEEEEEEccCCCCCC
Q psy14060 60 IHTAKSQQVQKEKKGDK----EIV----------RKI--------------TATETTEMEHK--GKIQERVVDASELDDD 109 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~----~i~----------~~~--------------~~~~~~~~~~~--~~~~~L~i~~~~~~D~ 109 (283)
+.+|++++|.|...+.. .+. ..+ ....|+.+..+ .+..+|.|.+++.+|+
T Consensus 35 ~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Ds 114 (267)
T 3u1s_H 35 KKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLTADDT 114 (267)
T ss_dssp ECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCCGGGC
T ss_pred EeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCChhhC
Confidence 66788999999996521 111 111 11245665433 3567899999999999
Q ss_pred eEEEEEEEe---------------------c-------ceeeeeecc--CCCCCCeEEecCCceeecCCCcEEEEEEEee
Q psy14060 110 GYYAITERK---------------------Y-------YALSDLSEQ--KPAKPPVFTKKIQPCRAFEQDQARFEVEFDG 159 (283)
Q Consensus 110 G~Y~C~a~n---------------------~-------~~~~~~~~~--~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g 159 (283)
|.|.|.+.+ . .+......+ ....+|.+...........|+.++|.|.+.+
T Consensus 115 G~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~~~~P~v~~~~~~~~~~~g~~~~l~C~~~~ 194 (267)
T 3u1s_H 115 AIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKD 194 (267)
T ss_dssp EEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCCCBCCEEEEECCCGGGEETTEEEEEEEEEE
T ss_pred EEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCCCCCCEEEEecCCcccCCCCcEEEEEEEeE
Confidence 999998851 1 111111112 2334555553333333457899999999987
Q ss_pred e-c-CCEEEEEeCCEecCCCCC-e-EEEEeC----CEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEE
Q psy14060 160 D-P-LPTIKWFREDFPITSSPD-F-QIHTFS----TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLV 222 (283)
Q Consensus 160 ~-p-~~~~~W~k~~~~~~~~~~-~-~~~~~~----~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~ 222 (283)
. | .+.+.| ++..+..... . .....+ ..+.|.|......| +.|+|.+.|..........+.
T Consensus 195 ~~p~~~~v~W--~~~~~~~~~~~~~~~~~~~g~y~~~s~L~i~~~~~~~-~~ytC~v~h~~~~~~~~~~~~ 262 (267)
T 3u1s_H 195 YFPEPVTVSW--NSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGT-QTYICNVNHKPSNTKVDKKVE 262 (267)
T ss_dssp EBSSCCEEEE--GGGTBCTTEEECCCEECTTSCEEEEEEEEEEGGGGGT-CCCEEEEEEGGGTEEEEEECC
T ss_pred EECCCeEEEE--CCcccCCCEEeCCceECCCCCEEEEEEEEECchhcCC-CEEEEEEEECCCCcceEEEcc
Confidence 4 5 468999 4443322100 0 000001 12358888888788 999999999876655444443
No 462
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.27 E-value=9.5e-12 Score=85.94 Aligned_cols=64 Identities=16% Similarity=0.245 Sum_probs=54.6
Q ss_pred eeeecCcEEEEEEEccCcc--ce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee
Q psy14060 59 EIHTAKSQQVQKEKKGDKE--IV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL 122 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~--i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~ 122 (283)
.+.+|+.+.|.|.+.|.|. +. ..+..+.++.+...+....|.|.+++.+|+|.|+|.|.|..|.
T Consensus 24 ~v~~G~~~~l~C~~~G~P~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~G~ 94 (107)
T 3knb_B 24 RVVSGAEAELKCVVLGEPPPVVVWEKGGQQLAASERLSFPADGAEHGLLLTAALPTDAGVYVCRARNAAGE 94 (107)
T ss_dssp EEETTSCEEEEEEEEEESCCEEEEEETTEECCCCSSEECCEETTEEEEEESSCCGGGCEEEEEEEEETTEE
T ss_pred EEeCCCcEEEEEEEEEecCCEEEEEECcccccceeeEEEeecCceEEEEEecCChhhCEEEEEEEEECCCE
Confidence 4777889999999999983 33 4556677888877788899999999999999999999999984
No 463
>1iam_A ICAM-1, CD54, intercellular adhesion molecule-1; rhinovirus receptor, cell adhesion, integrin ligand, glycopr LFA-1 ligand, immunoglobulin fold; HET: NAG; 2.10A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ic1_A* 1d3l_A 1d3e_I 1d3i_I 3tcx_A
Probab=99.27 E-value=1.6e-10 Score=87.32 Aligned_cols=123 Identities=9% Similarity=-0.036 Sum_probs=87.0
Q ss_pred ecCCceeecCCCcEEEEEEEeeecCCE-EEEEeC-CEecC-CCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 138 KKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFRE-DFPIT-SSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 138 ~~~~~~~~~~g~~v~l~C~~~g~p~~~-~~W~k~-~~~~~-~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
..+....+..|+++.|.|.+.. +.|. +.|.-. ++... .. ......|.|.+++. | |.|.|.+......
T Consensus 4 v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~~~~~~~~-------~~~~~~l~l~~vs~-~-g~y~C~~~c~~~~ 73 (185)
T 1iam_A 4 VSPSKVILPRGGSVLVTCSTSC-DQPKLLGIETPLPKKELLLP-------GNNRKVYELSNVQE-D-SQPMCYSNCPDGQ 73 (185)
T ss_dssp EESSEEEEETTEEEEEEEEECS-SSCSEEEEECSSCEEEECSS-------SSSEEEEEEEEECS-C-BCCEEEEECSSCE
T ss_pred EECCCcEEeCCCCEEEEEEccC-CCCccceEEeeCCCccEecc-------CCceeEEEEEecCc-C-CEEEEEEECCCCc
Confidence 3456677999999999999975 5554 677431 11111 11 11234588888873 4 9999999766556
Q ss_pred eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC--eeEEeeCCEEecC
Q psy14060 215 AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL--DVYWLKVSSLSDV 279 (283)
Q Consensus 215 ~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~--~v~W~~~g~~l~~ 279 (283)
....+.|.|.. .|..+...+....+.+|+.++|.|.+.|. |.. +|+||++++.+..
T Consensus 74 ~~~~~~l~V~~---------~P~~v~i~~~~~~~~~G~~~tL~C~v~g~~P~~~l~i~w~kg~~~l~~ 132 (185)
T 1iam_A 74 STAKTFLTVYW---------TPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKR 132 (185)
T ss_dssp EEEECEEEEEB---------CCSEEEECCCCSEECTTSEEEEEEEEECCBCGGGEEEEEEETTEEEEE
T ss_pred eEEEEEEEEeC---------CCCCCEEccCCccccCCCcEEEEEEcCCccCCCCcEEEEEeCCEEccc
Confidence 67778888886 24555556666679999999999999984 443 4899999999864
No 464
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.26 E-value=9.1e-11 Score=92.51 Aligned_cols=130 Identities=12% Similarity=0.115 Sum_probs=85.4
Q ss_pred CCceeecCCCcEEEEEEEee--ecCCEEEEEeCC--E---ec---C-----------CCCCeEEEEeC--CEEEEEEcCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDG--DPLPTIKWFRED--F---PI---T-----------SSPDFQIHTFS--TKSILIMRQV 196 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g--~p~~~~~W~k~~--~---~~---~-----------~~~~~~~~~~~--~~~~l~i~~~ 196 (283)
+....+.+|++++|.|.+.+ .+...+.|||.. . .+ . ...++.+.... ...+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (230)
T 3n9g_H 7 SGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSSL 86 (230)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred cCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 34577899999999999975 244679999742 1 11 0 02355554433 4567999999
Q ss_pred CCCCCEEEEEEEEeCC-----cee---EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCC--C
Q psy14060 197 FMEDSGVFAVIAENRG-----GKA---KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP--L 266 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~-----g~~---~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~--~ 266 (283)
..+|+|.|+|.+.+.. +.. .....|.|.... ..+|.+........+..|+.++|.|.+.+.++ +
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~v~~~~~~~~~~~g~~v~L~C~~~~~~P~~~ 160 (230)
T 3n9g_H 87 RSEDTAVYYCARDWGSNYVWGSYPKYWGQGTLVTVSSAS------TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEPV 160 (230)
T ss_dssp CGGGCEEEEEEEECCCSSSTTCCEEEECCCEEEEECSSC------CBCCEEEEECCCCCCCTTCEEEEEEEEEEEBSSCC
T ss_pred ChhhCEEEEEEEccCCCCcccccccccCCCEEEEEEecC------CCCCEEEecCCCccccCCCCEEEEEEEEeEECCCE
Confidence 9999999999998754 111 122456664211 13566654444445578999999999998543 3
Q ss_pred eeEEeeCCEEe
Q psy14060 267 DVYWLKVSSLS 277 (283)
Q Consensus 267 ~v~W~~~g~~l 277 (283)
.+.| +|..+
T Consensus 161 ~v~W--~~~~~ 169 (230)
T 3n9g_H 161 TVSW--NSGAL 169 (230)
T ss_dssp EEEE--GGGTB
T ss_pred EEEE--CCccc
Confidence 6999 65444
No 465
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=99.23 E-value=1.4e-10 Score=89.79 Aligned_cols=152 Identities=16% Similarity=0.172 Sum_probs=99.0
Q ss_pred eeeecCcEEEEEEEccCc----cce----------EEe---ec-----------CCCEEEE--EcCCEEEEEEccCCCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIV----------RKI---TA-----------TETTEME--HKGKIQERVVDASELDD 108 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~----------~~~---~~-----------~~~~~~~--~~~~~~~L~i~~~~~~D 108 (283)
.+..|++++|.|.+.|.. .+. .++ .. ..|+.+. ...+...|.+++++.+|
T Consensus 11 lvkPG~Sl~lSC~~SG~tf~~y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s~nt~yLqm~sL~~eD 90 (254)
T 4f9p_D 11 VVRPGTSVKVSCKASGYAFTSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQLSSLTSDD 90 (254)
T ss_dssp EECTTCCEEEEEEEESSCGGGCCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred eECCCCCeEEEEEEeCCChhhCcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccCCCcCeeEEccCCCCC
Confidence 467788999999999865 122 122 11 2355554 34578999999999999
Q ss_pred CeEEEEEEEecc---eeeeeeccC-------------------CCCCCeEEecCCceeecCCCcEEEEEEEeeecCCEEE
Q psy14060 109 DGYYAITERKYY---ALSDLSEQK-------------------PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIK 166 (283)
Q Consensus 109 ~G~Y~C~a~n~~---~~~~~~~~~-------------------~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~ 166 (283)
+..|.|...+.. |-.....+. ......++..+..+.+.+|+.++|.|..+..-...+.
T Consensus 91 TAvYYCAr~~~~d~WGqGT~VTVSSast~~ps~~~l~~~~sgGSgsdivltQsP~slsvs~G~~vtlsC~~S~~~~~~l~ 170 (254)
T 4f9p_D 91 SAVYFCARSDYGAYWGQGTLVTVSAAGGGGSGGGGSGGGGSGGGGSDIVLTQSPVTLSVTPGDSVSLSCRASQSISNNLH 170 (254)
T ss_dssp CEEEECEESSSCCEECCCEEEEECC-------------------CCSCCEEEECSEEEECTTCEEEEEEEESSCCTTCCE
T ss_pred CEEEEEEecCCCCCcCCCEEEEEeCCCCcCCCCCCCccccccccccccccccCCceeEEcCCCcEeeEEEccCcccCCcE
Confidence 999999643221 100000000 0011234555677789999999999998764445688
Q ss_pred EEeC--CEe---c-------CC--CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 167 WFRE--DFP---I-------TS--SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 167 W~k~--~~~---~-------~~--~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
||+. |+. + .. ..+|.....+...+|.|.++..+|.+.|+|...+
T Consensus 171 WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS~sgt~ftLtIs~lq~eD~A~YYC~q~~ 228 (254)
T 4f9p_D 171 WYRQKSHESPRLLIKYASQSIFGIPSRFSGSGSGTEFTLSINSVETEDFGIYFCQQSN 228 (254)
T ss_dssp EEEECTTSCCEEEEETTTEECTTSCTTCEEECCTTEEEEEEESCCTTCCEEEEEEECS
T ss_pred EEEECCCCCCEEEEEeeeecCCCCCCCEEeeeeCCEEEEEECCCCHHHCEEEEEeecC
Confidence 9864 221 1 01 1356666566677899999999999999997544
No 466
>3shs_A HOC head outer capsid protein; immunoglobulin-like domain, phage capsid decorative protein, interaction with bacteria; 1.95A {Enterobacteria phage RB49}
Probab=99.22 E-value=2.4e-10 Score=89.82 Aligned_cols=126 Identities=14% Similarity=0.222 Sum_probs=91.2
Q ss_pred EecCCceeecCCCcEEEEEEEee-ec---CCEEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCC
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDG-DP---LPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRG 212 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g-~p---~~~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~ 212 (283)
...|....+..|+.++|.|.+.+ .| ...++|+|++..+... ...|.+..+...|+|.|+|.+.+..
T Consensus 6 s~~P~~~~i~~GdsVTLTatVaGGkP~pspyTYqWyKDG~~IsGa----------T~tLti~s~t~sdSG~YqCvVTDa~ 75 (304)
T 3shs_A 6 SIQSNKRCFLAGDGFTLTATVAGDEPLPSNLTYTWTKDDQPHENN----------TATLTVADATSENAGSYKVTVQDTD 75 (304)
T ss_dssp EEEESCSSBCTTCCEEEEEEEEESSSCCCCEEEEEEETTEECSCC----------SSEEEESSCCGGGCEEEEEEEEETT
T ss_pred EeCCCCccccCCCCEEEEEEecCCCCCCCCceEEEEECCccccCC----------cceEEeeeccccCCeEEEEEEEECC
Confidence 34456667889999999999865 45 3479999999887642 2258899999999999999999988
Q ss_pred ceeEEEEEEEEEeccCCCCCCCCCCeEEe-cCCceEEcCCCeEEEEEEE--Ee-eC-----CCeeEEeeCCEEecCC
Q psy14060 213 GKAKCSANLVVEEKRQGGRGGVVPPSFLT-TISSAVINVGQLARFDAKI--SA-TK-----PLDVYWLKVSSLSDVK 280 (283)
Q Consensus 213 g~~~~~~~l~v~~~~~~~~~~~~~p~~~~-~~~~~~v~~g~~v~L~C~~--~g-~p-----~~~v~W~~~g~~l~~~ 280 (283)
|....+..+.|... ..+.+.. .+....+..|..+.|.+.+ .| .| ..+|+|++||..+...
T Consensus 76 Gcs~tSs~VtVT~~--------a~l~i~it~P~s~~vssg~sVtL~aTVt~SGGtppA~~~~yTYQWyKngt~IsgA 144 (304)
T 3shs_A 76 TMTSVESEVFLMEE--------AELIVNITEPQHFYVSSQTDVELHATVKFSGGKTPADNYELHYSWSKGEDVIDTT 144 (304)
T ss_dssp TCCEEECCCEEECB--------CCEEEEESSCSEEEECSSCCEEEEEEEEETTSCCSSTTCCCEEEEEETTEEEESS
T ss_pred CCeeeeeeEEEecc--------CceeEEecCCCceeccCCCeEEEEEEEeccCCCCcccCCCceeEEeeCCeEccCc
Confidence 87665555555542 1222222 2444556778899999988 43 34 4589999999887644
No 467
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.22 E-value=1.3e-10 Score=91.56 Aligned_cols=146 Identities=13% Similarity=0.045 Sum_probs=85.2
Q ss_pred eeeecCcEEEEEEEccCc----cce--E--------Eee---------cCCCEEEEE--cCCEEEEEEccCCCCCCeEEE
Q psy14060 59 EIHTAKSQQVQKEKKGDK----EIV--R--------KIT---------ATETTEMEH--KGKIQERVVDASELDDDGYYA 113 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~----~i~--~--------~~~---------~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~ 113 (283)
.+.+|++++|.|.+.|.+ .+. + .+. ...|+.+.. .++...|.|.+++.+|+|.|.
T Consensus 12 ~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~Dsg~Y~ 91 (229)
T 1hxm_A 12 PVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSERDEGSYY 91 (229)
T ss_dssp EEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCGGGCEEEE
T ss_pred EEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCHhHCeEEE
Confidence 366788999999998643 222 1 110 134666553 356789999999999999999
Q ss_pred EEEEecc------e---eeeeeccCC------CCCCeEEecCCceeecCCCcEEEEEEEeee-cCC-EEEEEeCCEecCC
Q psy14060 114 ITERKYY------A---LSDLSEQKP------AKPPVFTKKIQPCRAFEQDQARFEVEFDGD-PLP-TIKWFREDFPITS 176 (283)
Q Consensus 114 C~a~n~~------~---~~~~~~~~~------~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~-p~~-~~~W~k~~~~~~~ 176 (283)
|.+.+.. . ......+.+ ..+|.+... . ..+.|.|.+.+. |.+ .+.|+++ ..+..
T Consensus 92 C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~~~~~P~v~~~-------~-~~~~L~C~~~g~~P~~i~v~W~~~-~~~~~ 162 (229)
T 1hxm_A 92 CACDTLGMGGEYTDKLIFGKGTRVTVEPRSQPHTKPSVFVM-------K-NGTNVACLVKEFYPKDIRINLVSS-KKITE 162 (229)
T ss_dssp EEEECCCCSSSCCCCCEEBCCEEEEEECCSCCCBCCEEEEE-------E-ETTEEEEEEESCBSSCCEEEEECS-SEEEE
T ss_pred EEEecCCCcccccchhhcCccEEEEEeccCCCCcCCcEEEc-------C-CCCeEEEEEEEEeCCCEEEEEecC-CEEec
Confidence 9887652 1 111111211 123333221 1 124899999875 554 8999999 66543
Q ss_pred CCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 177 SPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 177 ~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
.........+....+. ......+.|.|+|.+.|..+.
T Consensus 163 ~~~~~~~~~dg~y~~~-~~~~~~~~~~ytC~V~h~~~~ 199 (229)
T 1hxm_A 163 FDPAIVISPSGKYNAV-KLGKYEDSNSVTCSVQHDNKT 199 (229)
T ss_dssp CCCEEEECTTSSEEEE-EEEEETTTTTCEEEEEETTEE
T ss_pred CccceEECCCCcEEEE-ECcccCCCCcEEEEEEeCCCC
Confidence 2221111111222222 112236789999999998643
No 468
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.21 E-value=1e-10 Score=94.29 Aligned_cols=124 Identities=13% Similarity=0.146 Sum_probs=78.0
Q ss_pred CceeecCCCcEEEEEEEeee--cCCEEEEEeCC--E---ec---C----------CCCCeEEEEe--CCEEEEEEcCCCC
Q psy14060 141 QPCRAFEQDQARFEVEFDGD--PLPTIKWFRED--F---PI---T----------SSPDFQIHTF--STKSILIMRQVFM 198 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~--~---~~---~----------~~~~~~~~~~--~~~~~l~i~~~~~ 198 (283)
....+.+|++++|.|.+.+. ....+.|||.. . .+ . ...++.+... ....+|.|.++..
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 87 (263)
T 3iu4_H 8 GPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQT 87 (263)
T ss_dssp CCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCH
Confidence 35678999999999999763 24679999742 1 11 0 0234555433 2456799999999
Q ss_pred CCCEEEEEEEEeCCc-----ee---EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCC--Cee
Q psy14060 199 EDSGVFAVIAENRGG-----KA---KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKP--LDV 268 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~g-----~~---~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~--~~v 268 (283)
+|+|.|+|.+.+..+ .. .....|.|.... ..+|.+........+..|+.++|.|.+.+.++ +.+
T Consensus 88 ~DsG~Y~C~~~~~~~~~~~~~~~~~~~~t~l~V~~~~------~~~P~v~~~~~~~~~~~g~~~~L~C~~~~~~P~~~~v 161 (263)
T 3iu4_H 88 DDTAMYYCARSGVREGRAQAWFAYWGQGTLVTVSAAS------TKGPSVFPLAPSSKGSTSGTAALGCLVKDYFPEPVTV 161 (263)
T ss_dssp GGCEEEEEEEEECC---CEEEEEEECCCEEEEECSSC------CBCCEEEEECCCCCC----EEEEEEEEEEEBSSCCEE
T ss_pred HHCEEEEEEEEeCCCCccccccceeCCceEEEEeccc------CCCCEEEEccCccccccCCcEEEEEEEEeEeCCceEE
Confidence 999999999987641 11 112355554211 13566654333344568999999999988543 479
Q ss_pred EE
Q psy14060 269 YW 270 (283)
Q Consensus 269 ~W 270 (283)
+|
T Consensus 162 ~W 163 (263)
T 3iu4_H 162 SW 163 (263)
T ss_dssp EE
T ss_pred EE
Confidence 99
No 469
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.20 E-value=1.3e-10 Score=91.38 Aligned_cols=125 Identities=14% Similarity=0.096 Sum_probs=80.7
Q ss_pred CCceeecCCCcEEEEEEEeee--cCCEEEEEeCC--E---ec----C----------CCCCeEEEEeC--CEEEEEEcCC
Q psy14060 140 IQPCRAFEQDQARFEVEFDGD--PLPTIKWFRED--F---PI----T----------SSPDFQIHTFS--TKSILIMRQV 196 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~--~---~~----~----------~~~~~~~~~~~--~~~~l~i~~~ 196 (283)
+....+.+|++++|.|.+.+. +...+.|||.. . .+ . ...++.+.... ...+|.|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (226)
T 3mlr_H 7 SGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTL 86 (226)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSC
T ss_pred CCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCC
Confidence 345788999999999999763 35689999842 1 11 0 01345444332 4567999999
Q ss_pred CCCCCEEEEEEEEeCCc------eeE---EEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-C-C
Q psy14060 197 FMEDSGVFAVIAENRGG------KAK---CSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-K-P 265 (283)
Q Consensus 197 ~~~d~G~Y~C~a~n~~g------~~~---~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p-~ 265 (283)
..+|+|.|+|.+.+..+ ... ....|.|.... ..+|.+...+....+..|+.+.|.|.+.+. | .
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~t~l~V~~~~------~~~P~i~~~~~~~~~~~g~~~~l~C~~~~~~p~~ 160 (226)
T 3mlr_H 87 QASDTGKYFCTRLYLFEGAQSSNAFDLWGQGTMILVSSGT------TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPEP 160 (226)
T ss_dssp CGGGCEEEEEEEEEEEESSSEEEEEEEECCCEEEEECCCC------CBCCEEEEEEEEECSTTSSEEEEEEEEEEEBSSC
T ss_pred CcccCEEEEEeEccCCCcccccchhhhhCCccEEeeccCC------CCCCcEEEecCcccccCCCCEEEEEEEEEEECCC
Confidence 99999999999976431 011 11345554211 135555543333445689999999999885 4 3
Q ss_pred CeeEE
Q psy14060 266 LDVYW 270 (283)
Q Consensus 266 ~~v~W 270 (283)
+.+.|
T Consensus 161 ~~v~W 165 (226)
T 3mlr_H 161 VTVSW 165 (226)
T ss_dssp CEEEE
T ss_pred eEEEE
Confidence 47999
No 470
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.18 E-value=1.1e-10 Score=89.05 Aligned_cols=154 Identities=10% Similarity=-0.057 Sum_probs=93.7
Q ss_pred eeeecCcEEEEEEEccCc-cceEEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecc-eeeeeeccCCCCCCeE
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EIVRKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYY-ALSDLSEQKPAKPPVF 136 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~-~~~~~~~~~~~~~p~~ 136 (283)
.|.+|+++.|.|.+.... +...+...-.+...........+.|.+++ +|.+.|.|.+.... .......+.+..+|..
T Consensus 13 ~V~~G~Sv~l~Cs~~c~~p~~~~~~t~l~~~~~~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~~~~~~~v~l~Vy~~P~~ 91 (196)
T 3bn3_B 13 FVERGGSLWLNCSTNCPRPERGGLETSLRRNGTQRGLRWLARQLVDIR-EPETQPVCFFRCARRTLQARGLIRTFQRPDR 91 (196)
T ss_dssp EEETTEEEEEEEEECCSSCSEEEEECSSEEEEEEEETTEEEEEEEEEC-SSEECCEEEEEETTEEEEEECEEEEEBCCCC
T ss_pred EEcCCCeEEEEEeCCCCCCCccEEEEccCCeeEccccCceEEEEEEEc-cCCCceEEEEECCCCceEEEEEEEEecCCCc
Confidence 377789999999996433 23222222222333333356668999998 88888999976642 2344444544444433
Q ss_pred -EecCCceeecCCCcEEEEEEEeee-cCC--EEEEEeCCEecCCCCCe-EE-EEeCCEEEEEEcCCCCCCCEEEEEEEEe
Q psy14060 137 -TKKIQPCRAFEQDQARFEVEFDGD-PLP--TIKWFREDFPITSSPDF-QI-HTFSTKSILIMRQVFMEDSGVFAVIAEN 210 (283)
Q Consensus 137 -~~~~~~~~~~~g~~v~l~C~~~g~-p~~--~~~W~k~~~~~~~~~~~-~~-~~~~~~~~l~i~~~~~~d~G~Y~C~a~n 210 (283)
...+.+..+.+|+.++|.|.+.+. |.. .+.|||++..+...... .. ........+.+.....++...|+|.|.+
T Consensus 92 v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~~~~~~~~~~~~~t~~~~~~~~r~D~g~~~sC~A~l 171 (196)
T 3bn3_B 92 VELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRRSFAGEPPRARGAVLTATVLARREDHGANFSCRAEL 171 (196)
T ss_dssp CEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEEECTTSCTTCCCEEEEEEEECCGGGTTCEEEEEEEE
T ss_pred CEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeeccccccccccccceeEEEEEeeeeccCCCeEEEEEEc
Confidence 233333447899999999999874 543 48999999877421100 00 0000124466665555555599999998
Q ss_pred CCc
Q psy14060 211 RGG 213 (283)
Q Consensus 211 ~~g 213 (283)
..+
T Consensus 172 ~l~ 174 (196)
T 3bn3_B 172 DLR 174 (196)
T ss_dssp ECG
T ss_pred cCC
Confidence 765
No 471
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.18 E-value=1e-10 Score=84.06 Aligned_cols=89 Identities=12% Similarity=0.241 Sum_probs=66.9
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--E---ec-CCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEE
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--F---PI-TSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~---~~-~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 208 (283)
.+...+....+..|++++|.|.+.+. +.+.|||+. . .+ ....++.+...+....|.|.++..+|+|.|+|.+
T Consensus 19 ~v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~~~~~r~~~~~~~~~~~L~I~~~~~~DsG~Y~C~a 96 (133)
T 3khq_A 19 QIWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELVSEEGRIVQTQNGSVYTLTIQNIQYEDNGIYFCKQ 96 (133)
T ss_dssp SEEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECCCTTTTEEEEEETTEEEEEECSCCGGGCEEEEEEE
T ss_pred ceEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEEEeCCCEEEEcCCCEEEEEECCCChHHCEEEEEEE
Confidence 45666777889999999999999885 889999972 2 11 2345777776777788999999999999999999
Q ss_pred EeCCce----eEEEEEEEEEe
Q psy14060 209 ENRGGK----AKCSANLVVEE 225 (283)
Q Consensus 209 ~n~~g~----~~~~~~l~v~~ 225 (283)
.|..|. ......|.|..
T Consensus 97 ~n~~g~~~~~~g~gt~L~V~~ 117 (133)
T 3khq_A 97 KCDSANHNVTDSCGTELLVLG 117 (133)
T ss_dssp SSCC-------CCCEEEEEC-
T ss_pred EeCCCCcceeECCCEEEEEEe
Confidence 988752 12335666654
No 472
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.18 E-value=2.8e-10 Score=91.26 Aligned_cols=129 Identities=17% Similarity=0.162 Sum_probs=80.4
Q ss_pred CceeecCCCcEEEEEEEeee--cCCEEEEEeCC--E---ec--------------CCCCCeEEEEe--CCEEEEEEcCCC
Q psy14060 141 QPCRAFEQDQARFEVEFDGD--PLPTIKWFRED--F---PI--------------TSSPDFQIHTF--STKSILIMRQVF 197 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~--~---~~--------------~~~~~~~~~~~--~~~~~l~i~~~~ 197 (283)
....+.+|++++|.|.+.+. ....+.|||.. . .+ ....++.+... ....+|.|.++.
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (256)
T 3sob_H 31 GGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLR 110 (256)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCC
Confidence 44678999999999999753 34679999742 1 11 01134555433 245679999999
Q ss_pred CCCCEEEEEEEEeCCc---------e--eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-C-
Q psy14060 198 MEDSGVFAVIAENRGG---------K--AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-K- 264 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~~g---------~--~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p- 264 (283)
.+|+|.|+|.+.+..+ . ......+.|.... ..+|.+........+.+|+.++|.|.+.+. |
T Consensus 111 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~~------~~~P~i~~~~~~~~~~~g~~v~L~C~~~~~~p~ 184 (256)
T 3sob_H 111 AEDTAVYYCARGSGHVNAVKNYGYVMDYWGQGTLVTVSSAS------TKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE 184 (256)
T ss_dssp GGGCEEEEEEEESSCTTCSSCCTTSEEEECCCEEEEECSSC------CBCCEEEEECCC-----TTEEEEEEEEEEEBSS
T ss_pred cccCEEEEEEEecCCCccccccccceeEECCCEEEEEecCC------CCCCEEEEECCCcccccCCcEEEEEEEEEEECC
Confidence 9999999999987431 1 1122355554211 135666544444456789999999999884 4
Q ss_pred CCeeEEeeCCEEe
Q psy14060 265 PLDVYWLKVSSLS 277 (283)
Q Consensus 265 ~~~v~W~~~g~~l 277 (283)
.+.+.| +|..+
T Consensus 185 ~~~v~W--~~~~~ 195 (256)
T 3sob_H 185 PVTVSW--NSGAL 195 (256)
T ss_dssp CCEEEE--GGGTB
T ss_pred CeEEEE--CCccc
Confidence 236999 55433
No 473
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.15 E-value=8.4e-10 Score=86.95 Aligned_cols=129 Identities=15% Similarity=0.128 Sum_probs=83.9
Q ss_pred EecCCceeecCCCcEEEEEEEeeec--CCEEEEEeCC--E---ecC---------CCCCeEEEEe--CCEEEEEEcCCCC
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRED--F---PIT---------SSPDFQIHTF--STKSILIMRQVFM 198 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~~--~---~~~---------~~~~~~~~~~--~~~~~l~i~~~~~ 198 (283)
...+..+.+..|++++|.|.+.+.+ ...+.|||.. . .+. ...++.+... .....|.|.++..
T Consensus 5 ~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 84 (229)
T 1hxm_A 5 VPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPSE 84 (229)
T ss_dssp EESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCCG
T ss_pred EeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCCH
Confidence 4456677899999999999998643 4689999852 1 110 1245655543 4567899999999
Q ss_pred CCCEEEEEEEEeCC------ce--eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC-ee
Q psy14060 199 EDSGVFAVIAENRG------GK--AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL-DV 268 (283)
Q Consensus 199 ~d~G~Y~C~a~n~~------g~--~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~-~v 268 (283)
+|+|.|+|.+.+.. +. ......|.|..... ...+|.+.... ..+.|.|.+.|. |.+ .+
T Consensus 85 ~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~~~~----~~~~P~v~~~~--------~~~~L~C~~~g~~P~~i~v 152 (229)
T 1hxm_A 85 RDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEPRSQ----PHTKPSVFVMK--------NGTNVACLVKEFYPKDIRI 152 (229)
T ss_dssp GGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEECCSC----CCBCCEEEEEE--------ETTEEEEEEESCBSSCCEE
T ss_pred hHCeEEEEEEecCCCcccccchhhcCccEEEEEeccCC----CCcCCcEEEcC--------CCCeEEEEEEEEeCCCEEE
Confidence 99999999998763 11 11224666663100 00244443211 124899999975 544 89
Q ss_pred EEeeCCEEec
Q psy14060 269 YWLKVSSLSD 278 (283)
Q Consensus 269 ~W~~~g~~l~ 278 (283)
.|++| +.+.
T Consensus 153 ~W~~~-~~~~ 161 (229)
T 1hxm_A 153 NLVSS-KKIT 161 (229)
T ss_dssp EEECS-SEEE
T ss_pred EEecC-CEEe
Confidence 99999 6654
No 474
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.15 E-value=3.6e-10 Score=75.77 Aligned_cols=65 Identities=12% Similarity=0.161 Sum_probs=53.3
Q ss_pred eeeecCcEEEEEEEccCc-cce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EIV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALS 123 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~ 123 (283)
.+.+|+.++|.|.+.+.+ .+. ..+..+.++.+...+....|.|.+++.+|+|.|+|.|.|..+..
T Consensus 16 ~v~~G~~v~l~C~v~~~~~~v~W~k~g~~i~~~~~~~i~~~g~~~~L~I~~v~~~D~G~Y~C~a~n~~~sa 86 (93)
T 1waa_A 16 EVFVGETAHFEIELSEPDVHGQWKLKGQPLAASPDCEIIEDGKKHILILHNCQLGMTGEVSFQAANTKSAA 86 (93)
T ss_dssp EEETTSCEEEEEEESSSSCCCEEEETTEECCCBTTEEEEEETTEEEEEECSCCGGGCEEEEEEETTEEEEE
T ss_pred EEeCCCCEEEEEEECCCCCeEEEEECCEECcCCCCEEEEEECCEEEEEECCCChhhCEEEEEEECCCcEEE
Confidence 577888999999998765 443 45566778888888888999999999999999999998865443
No 475
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.14 E-value=1.8e-09 Score=90.87 Aligned_cols=126 Identities=14% Similarity=0.171 Sum_probs=88.4
Q ss_pred cCCceeecCCCcEEEEEEEeeec--------------CCEEEEEeC--CE--e--c-CCC----------CCeEEEE---
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDP--------------LPTIKWFRE--DF--P--I-TSS----------PDFQIHT--- 184 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p--------------~~~~~W~k~--~~--~--~-~~~----------~~~~~~~--- 184 (283)
....+.+..|++++|.|..+..+ ...+.||+. +. . + ..+ ....+..
T Consensus 164 q~~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~ 243 (401)
T 3f8u_B 164 HTPAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDD 243 (401)
T ss_dssp SCSSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESC
T ss_pred CCCcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecc
Confidence 34567889999999999986533 246899874 31 1 1 111 0111211
Q ss_pred ------eCCEEEEEEcCCCCCCCEEEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceE-EcCCC-eEEE
Q psy14060 185 ------FSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAV-INVGQ-LARF 256 (283)
Q Consensus 185 ------~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~-v~~g~-~v~L 256 (283)
.....+|.|.++..+|.|.|+|.+.+..+.......|.|.. +|.+...+.... +..|+ .++|
T Consensus 244 ~~~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~----------pP~V~v~p~~~~~~~~G~~~vtL 313 (401)
T 3f8u_B 244 DEPWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYK----------PPKVSLMPATLARAAPGEAPPEL 313 (401)
T ss_dssp CCSSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEB----------CCEEEEESSSCCCCCTTCCCCCE
T ss_pred cccccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeecc----------CCeEeeccCcceeecCCCccEEE
Confidence 11346899999999999999999999888777777888874 677766554443 45776 7999
Q ss_pred EEEEEee-CC--CeeEEe-eCC
Q psy14060 257 DAKISAT-KP--LDVYWL-KVS 274 (283)
Q Consensus 257 ~C~~~g~-p~--~~v~W~-~~g 274 (283)
.|.+.|. |. +.++|+ +||
T Consensus 314 ~C~a~GfyP~~~~~VtW~~rdg 335 (401)
T 3f8u_B 314 LCLVSHFYPSGGLEVEWELRGG 335 (401)
T ss_dssp EEEEEEEBSSTTCEEEEEEESS
T ss_pred EEEecCCcCCCCcEEEEEecCC
Confidence 9999985 55 689995 876
No 476
>3bn3_B ICAM-5, intercellular adhesion molecule 5, telencephalin; I domain, integrin, allosteric mobility, cell adhesi immune system; HET: NAG; 2.10A {Homo sapiens}
Probab=99.11 E-value=2.2e-09 Score=81.72 Aligned_cols=128 Identities=5% Similarity=-0.117 Sum_probs=87.3
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCC-EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLP-TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~-~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
+...+....+..|+++.|.|.+.. +.+ .+.|.-.-. ............+.|.++. +|.+.|.|.+......
T Consensus 5 v~v~P~~~~V~~G~Sv~l~Cs~~c-~~p~~~~~~t~l~------~~~~~~g~~~~~~~ls~vs-~d~~~~~C~~~c~~~~ 76 (196)
T 3bn3_B 5 ADLQPRVAFVERGGSLWLNCSTNC-PRPERGGLETSLR------RNGTQRGLRWLARQLVDIR-EPETQPVCFFRCARRT 76 (196)
T ss_dssp EEEESSEEEEETTEEEEEEEEECC-SSCSEEEEECSSE------EEEEEEETTEEEEEEEEEC-SSEECCEEEEEETTEE
T ss_pred EEEcCCCcEEcCCCeEEEEEeCCC-CCCCccEEEEccC------CeeEccccCceEEEEEEEc-cCCCceEEEEECCCCc
Confidence 344566678999999999999975 555 677743211 0111112233457888888 7878799998776666
Q ss_pred eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEee-CCC--eeEEeeCCEEecCC
Q psy14060 215 AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISAT-KPL--DVYWLKVSSLSDVK 280 (283)
Q Consensus 215 ~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~-p~~--~v~W~~~g~~l~~~ 280 (283)
....+.|.|... |-.+...+....+.+|+.++|.|.+.+. |.. +|.|+++++.|..+
T Consensus 77 ~~~~v~l~Vy~~---------P~~v~i~~~~~~~~~G~~~tL~C~v~~~~P~~~L~i~wlkg~~~l~~~ 136 (196)
T 3bn3_B 77 LQARGLIRTFQR---------PDRVELMPLPPWQPVGENFTLSCRVPGAGPRASLTLTLLRGAQELIRR 136 (196)
T ss_dssp EEEECEEEEEBC---------CCCCEECCCCSSEETTSEEEEEEEETTCBCGGGEEEEEEETTEEEEEE
T ss_pred eEEEEEEEEecC---------CCcCEEccCCccccCCCcEEEEEEeCCccCCCCcEEEEEeCCEEeecc
Confidence 777788888863 3333333333347899999999999874 443 38999999998643
No 477
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.11 E-value=4.3e-10 Score=77.64 Aligned_cols=77 Identities=13% Similarity=0.110 Sum_probs=59.7
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCE-----ec---------CCCCCeEEEEeCCEEEEEEcCCCCCCC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDF-----PI---------TSSPDFQIHTFSTKSILIMRQVFMEDS 201 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~-----~~---------~~~~~~~~~~~~~~~~l~i~~~~~~d~ 201 (283)
+...+....+.+|++++|.|.+.+.|.+.+.|||+.. .+ ....++.+........|.|.++..+|+
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 83 (108)
T 1jhl_L 4 LTQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSGSGTDFTLTISSLEPEDF 83 (108)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEESSSEEEEEECSCCTTCC
T ss_pred eeccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEecCCEEEEEECCCCHHHC
Confidence 3455667889999999999999988888999998531 11 012456555555667899999999999
Q ss_pred EEEEEEEEeCC
Q psy14060 202 GVFAVIAENRG 212 (283)
Q Consensus 202 G~Y~C~a~n~~ 212 (283)
|.|+|.+.|..
T Consensus 84 G~Y~C~~~n~~ 94 (108)
T 1jhl_L 84 AMYICQQHNEY 94 (108)
T ss_dssp SEEEEEECSSS
T ss_pred EEEEEEEccCC
Confidence 99999998863
No 478
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.08 E-value=3.5e-10 Score=76.96 Aligned_cols=65 Identities=17% Similarity=0.259 Sum_probs=52.5
Q ss_pred eeeecCcEEEEEEEccCccce-------EEeec--CCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-------RKITA--TETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALS 123 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-------~~~~~--~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~ 123 (283)
.+.+|+.+.|.|.+.|.|... +.+.. ..++.+...+....|.|.+++.+|+|.|+|.|.|..|..
T Consensus 16 ~v~~G~~~~l~C~~~g~P~p~v~W~k~g~~i~~~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~N~~G~~ 89 (100)
T 3knb_A 16 SIDEGKVLTVACAFTGEPTPEVTWSCGGRKIHSQEQGRFHIENTDDLTTLIIMDVQKQDGGLYTLSLGNEFGSD 89 (100)
T ss_dssp EEETTSEEEEEEEEEEESCCEEEEEETTEECCTTGGGTEEEEECSSEEEEEESSCCGGGCEEEEEEEEETTEEE
T ss_pred EEeCCCeEEEEEEEEEecCCEEEEEECceEeeeeccceeeeecccceEEEEEcCCCccCCEEEEEEEEECCCEE
Confidence 467788999999999998433 33332 346777777788999999999999999999999998853
No 479
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.07 E-value=2e-10 Score=100.46 Aligned_cols=82 Identities=28% Similarity=0.443 Sum_probs=66.2
Q ss_pred CCceeecCCCcEEEEEEEeeecCCEEEEEeCCEecCCC---CCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCceeE
Q psy14060 140 IQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS---PDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAK 216 (283)
Q Consensus 140 ~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~~~~~---~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~~~ 216 (283)
+....+..|+.+.|.|.+.|.|.|.+.|++++..+... .++.+.. ..+|.|.++..+|+|.|+|.|.|..|...
T Consensus 392 ~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~~~~~~~~~~~~~~~---~~~L~i~~v~~~d~G~Y~C~a~N~~g~~~ 468 (477)
T 2id5_A 392 AQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKHLVSAKSNGRLTVFP---DGTLEVRYAQVQDNGTYLCIAANAGGNDS 468 (477)
T ss_dssp CEEEEEETTCCEEECCCEEEESCCEEEEECTTSCBC-------CEECT---TSCEEESSCCSTTCEEEEEEEEETTEEEE
T ss_pred cccEEEeCCCeEEEEEeccccCCCEEEEEECCccccccCCCceEEeCC---CCEEEEeeCChHHCEEEEEEEEeCCCcEE
Confidence 45678899999999999999999999999998876532 2222221 23599999999999999999999999988
Q ss_pred EEEEEEEE
Q psy14060 217 CSANLVVE 224 (283)
Q Consensus 217 ~~~~l~v~ 224 (283)
..+.+.|.
T Consensus 469 ~~~~l~V~ 476 (477)
T 2id5_A 469 MPAHLHVR 476 (477)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 88888775
No 480
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.07 E-value=3.5e-10 Score=74.23 Aligned_cols=65 Identities=12% Similarity=0.156 Sum_probs=53.2
Q ss_pred eeeecCcEEEEEEEccCc-cce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee
Q psy14060 59 EIHTAKSQQVQKEKKGDK-EIV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALS 123 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~ 123 (283)
.+.+|+.++|.|.+.|.+ .+. ..+..+.++.+...+....|.|.+++.+|+|.|+|.|.|..+..
T Consensus 7 ~~~~G~~v~l~C~vs~p~p~v~W~k~g~~l~~~~~~~~~~~~~~~~L~I~~~~~~D~G~Y~C~a~n~~~~a 77 (84)
T 2lu7_A 7 RSTPGGDLELVVHLSGPGGPVRWYKDGERLASQGRVQLEQAGARQVLRVQGARSGDAGEYLCDAPQDSRIF 77 (84)
T ss_dssp EECTTSCEEEECCCSCCSTTCEEEETTEECCCCSSEEEEECSSCEEEEESSCSSTTCEEEEEECTTTCEEE
T ss_pred EEecCCCEEEEEEECCCCcEEEEEECCEEccccccEEEeecCCeEEEEecCCCCcccEEEEEEECCEEEEE
Confidence 366788999999997733 444 56677788888888888999999999999999999998765543
No 481
>2v5y_A Receptor-type tyrosine-protein phosphatase MU; membrane, hydrolase, glycoprotein, receptor protei tyrosine phosphatase, cell adhesion; HET: NAG; 3.10A {Homo sapiens}
Probab=99.06 E-value=1.8e-08 Score=92.77 Aligned_cols=197 Identities=12% Similarity=0.099 Sum_probs=117.2
Q ss_pred cceEEEEEcCCeeeeeeeEEEEeCCCCCCCCCceeeecCCeeeecCcEEEEEEEccCcc--ceEEe--ecCCCEEEE---
Q psy14060 19 ILKSRTASSDRSGVSTEETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKE--IVRKI--TATETTEME--- 91 (283)
Q Consensus 19 ~~~~~~a~n~~g~~~~~~~l~v~~~~~~~~~p~~~~~~~~~v~~g~~v~l~C~~~g~~~--i~~~~--~~~~~~~~~--- 91 (283)
+++.|++.|..|............. ....|.|.......+.+|+.++|.|.+.|.|. +..++ ..+......
T Consensus 137 l~~~~va~~~~G~~~~~~v~~~~~~--~~~~p~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~~W~~~~~g~~l~~~~~~ 214 (731)
T 2v5y_A 137 VIFEVITSGHQGYLAIDEVKVLGHP--CTRTPHFLRIQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIK 214 (731)
T ss_dssp EEEEEEECSSCCEEEECCBEEESSC--CSSSCEECCCCCEEEETTSCEEEEEEEESCCCTTCEEEEEESSSCCEEEEEEE
T ss_pred EEEEEEecCCceEEEEeeEEeeecc--cccccccccccceEEeCCCcEEEEEEeCCCCCCceeEEEecCCCccccccceE
Confidence 6777899999998765433222221 12244444333335777889999999999983 33255 233222211
Q ss_pred ---EcCCEEEEEEccCCCCCCeEEEEEEEeccee--eeeeccCCCCCCeEEecCCceeecCCCcEEEEEEEeee----cC
Q psy14060 92 ---HKGKIQERVVDASELDDDGYYAITERKYYAL--SDLSEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGD----PL 162 (283)
Q Consensus 92 ---~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~g~~v~l~C~~~g~----p~ 162 (283)
.......|.|.++.+.|+|.|+|.|.|..|. .....+.+..+|.....+.... .....+.|.|..... +.
T Consensus 215 ~~~~~~~~~~l~I~~~~~~d~g~Y~c~A~n~~G~~~s~~~~l~V~~~P~~~~~p~~~~-~~~~~v~l~w~~~~~~g~~~i 293 (731)
T 2v5y_A 215 VTSSRRFIASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVVKEPPVPIAPPQLAS-VGATYLWIQLNANSINGDGPI 293 (731)
T ss_dssp ECCSSEEEEEEEECSCCTTTCEEEEEEEEETTEEEECCCEEEEEECCCCBSSCCEEEE-ECSSCEEEECCCSSBSSCSCC
T ss_pred EeccccceEEEEEcccccccCeEEEEEEECCCCCcceeeEEEEEecCCCCCCCcceec-cCCceEEEEeCCcccCCCCcc
Confidence 1112478999999999999999999999885 2223344444554332222222 234578888875321 11
Q ss_pred C--EEEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEE--eCCceeEEEEEEEEE
Q psy14060 163 P--TIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAE--NRGGKAKCSANLVVE 224 (283)
Q Consensus 163 ~--~~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~--n~~g~~~~~~~l~v~ 224 (283)
. .+.|...+. ....+ .......+.|.++...+...|.|.|. |..|....+..+.+.
T Consensus 294 ~~Y~v~~~~~~~-----~~~~~-~~~~~~~~~i~~L~p~t~Y~~~V~A~~~N~~G~s~~S~~~~~~ 353 (731)
T 2v5y_A 294 VAREVEYCTASG-----SWNDR-QPVDSTSYKIGHLDPDTEYEISVLLTRPGEGGTGSPGPALRTR 353 (731)
T ss_dssp CEEEEEEEESSS-----SCEEE-EECCSSEEEECSCCTTCEEEEEEEEECSSTTCSCCBCCCEEEE
T ss_pred EEEEEEEEECCC-----CceEE-eccCcceEEEeCCCCCCEEEEEEEEEecCCCccccCCCcEEee
Confidence 2 455654321 11112 22233568999999999889999999 988875544333333
No 482
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.06 E-value=1.1e-09 Score=82.66 Aligned_cols=150 Identities=15% Similarity=0.063 Sum_probs=92.1
Q ss_pred eeecCcEEEEEEEccCc-cceEEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecc-eeeeeeccCCCCCCeEE
Q psy14060 60 IHTAKSQQVQKEKKGDK-EIVRKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYY-ALSDLSEQKPAKPPVFT 137 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~-~i~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~-~~~~~~~~~~~~~p~~~ 137 (283)
|..|+++.|.|.+.... ....+...-.+...+...+...|.|.+++ |.|.|.|.+.... .......+.+..+|...
T Consensus 14 V~~G~S~~l~Cs~~c~~p~~~glet~l~~~~~~~g~~w~~l~l~~vs--~~g~~~C~~~c~~~~~~~~~~itVy~~P~~v 91 (192)
T 1zxq_A 14 VEPKGSLEVNCSTTCNQPEVGGLETSLNKILLDEQAQWKHYLVSNIS--HDTVLQCHFTCSGKQESMNSNVSVYQPPRQV 91 (192)
T ss_dssp ECTTEEEEEEEEESCSSCSEEEEECSSEEEEEEEETTEEEEEEEEEC--SCEEEEEEEEETTEEEEEEEEEEECBCCCCC
T ss_pred EeCCCcEEEEEECCCCCccccccccccCceEEcCCCCeEEEEEeccc--cCCeeEEEEECCCcceEEEEEEEEEeCCCCc
Confidence 56788999999996432 32222222233334444567789999998 8899999887653 34444555555555432
Q ss_pred -ecCCceeecCCCcEEEEEEEee-ecCC--EEEEEeCCEecCCCCCeEEEEe-CC-EEEEEEcCCCCCCCE-EEEEEEEe
Q psy14060 138 -KKIQPCRAFEQDQARFEVEFDG-DPLP--TIKWFREDFPITSSPDFQIHTF-ST-KSILIMRQVFMEDSG-VFAVIAEN 210 (283)
Q Consensus 138 -~~~~~~~~~~g~~v~l~C~~~g-~p~~--~~~W~k~~~~~~~~~~~~~~~~-~~-~~~l~i~~~~~~d~G-~Y~C~a~n 210 (283)
..+.+..+..|+.++|.|.+.+ +|.. .+.|++++..+........... .. ..++.+. +.++|.| +|+|.|..
T Consensus 92 ~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~~f~~~~~~~~~~tv~~~~~-~~r~D~g~~~sC~A~L 170 (192)
T 1zxq_A 92 ILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYETFGKAAPAPQEATATFNST-ADREDGHRNFSCLAVL 170 (192)
T ss_dssp EEEEESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEEECCSSTTCTTCEEEEEEEE-CCGGGGGCEEEEEEEE
T ss_pred eEccCCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeecccccccCcCcceEEEEEEe-cchhhCCceEEEEEEe
Confidence 2323346889999999999975 5654 5899999887642100000000 11 1123343 5555666 99999976
Q ss_pred CC
Q psy14060 211 RG 212 (283)
Q Consensus 211 ~~ 212 (283)
..
T Consensus 171 ~L 172 (192)
T 1zxq_A 171 DL 172 (192)
T ss_dssp EC
T ss_pred cC
Confidence 55
No 483
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.05 E-value=7.9e-10 Score=76.91 Aligned_cols=84 Identities=11% Similarity=0.063 Sum_probs=61.8
Q ss_pred CCeeeeeeeEEEEeCCCCCCCCCceeee-cCCeeeecCcEEEEEEEccCccce-----EEeecCCCEEEEEcCCEEEEEE
Q psy14060 28 DRSGVSTEETKIIDGRKVSVPEPSASGV-HGKEIHTAKSQQVQKEKKGDKEIV-----RKITATETTEMEHKGKIQERVV 101 (283)
Q Consensus 28 ~~g~~~~~~~l~v~~~~~~~~~p~~~~~-~~~~v~~g~~v~l~C~~~g~~~i~-----~~~~~~~~~~~~~~~~~~~L~i 101 (283)
..|..+....|.|...+ |.|... ....+.+|+.+.|.|.+.+.|.+. ..+....++.+...+....|.|
T Consensus 3 s~g~~~~~~~l~V~~~p-----p~~~~~~~~~~v~~G~~v~l~C~~~~~p~v~W~k~~~~l~~~~~~~~~~~~~~~~L~I 77 (113)
T 2edh_A 3 SGSSGRTSAMLTVRALP-----IKFTEGLRNEEATEGATAVLRCELSKMAPVEWWKGHETLRDGDRHSLRQDGARCELQI 77 (113)
T ss_dssp CCCCCCCCCCCCCCCSC-----CCEEECCCCCEECTTSCEEEEEEESSCCCCEEEESSSBCCCSSSEEEEEETTEEEEEE
T ss_pred CCCCCcEEEEEEEEcCC-----CcccccCCceEEeCCCeEEEEEEECCCCcEEEEECCEECCCCCcEEEEECCCEEEEEE
Confidence 34556666677777543 333322 223477788999999999887654 2344567888887778889999
Q ss_pred ccCCCCCCeEEEEEE
Q psy14060 102 DASELDDDGYYAITE 116 (283)
Q Consensus 102 ~~~~~~D~G~Y~C~a 116 (283)
.+++.+|+|.|+|.+
T Consensus 78 ~~v~~~D~G~Y~C~a 92 (113)
T 2edh_A 78 RGLVAEDAGEYLCMC 92 (113)
T ss_dssp CSCCSTTCEEEEEEE
T ss_pred CCCChhhCEEEEEEe
Confidence 999999999999999
No 484
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=98.63 E-value=1.8e-11 Score=92.95 Aligned_cols=129 Identities=13% Similarity=0.092 Sum_probs=79.5
Q ss_pred cCCceeecCCCcEEEEEEEeeecCCEEEEEeCCE--e---cC---------CCCCeEEEE--eCCEEEEEEcCCCCCCCE
Q psy14060 139 KIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDF--P---IT---------SSPDFQIHT--FSTKSILIMRQVFMEDSG 202 (283)
Q Consensus 139 ~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~--~---~~---------~~~~~~~~~--~~~~~~l~i~~~~~~d~G 202 (283)
.+..+.+.+|++++|.|.+.+.+.+.+.|||... . +. ...++.+.. ......|.|.++..+|+|
T Consensus 6 ~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~~DsG 85 (185)
T 3c6l_A 6 SPQSLTVWEGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGDSA 85 (185)
Confidence 3556788899999999999876656899998641 1 10 112333321 123457999999999999
Q ss_pred EEEEEEEeCCceeEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCCeeEEeeCCEEe
Q psy14060 203 VFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPLDVYWLKVSSLS 277 (283)
Q Consensus 203 ~Y~C~a~n~~g~~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~~v~W~~~g~~l 277 (283)
.|+|.+.+.......-..|.|.... ...+|.+...... .+.++|.|.+.| +|.|.|.|+.+....
T Consensus 86 ~Y~C~~~~~~~~fg~gT~L~V~~~~-----~~~~P~V~~~~~~-----~~~vtL~C~~~gf~P~p~v~~~~~~~~~ 151 (185)
T 3c6l_A 86 TYFCAASDNRIFFGDGTQLVVKPNI-----QNPEPAVYQLKDP-----RSQDSTLCLFTDFDSQINVPKTMESGTF 151 (185)
Confidence 9999987621111112345554310 0012333322111 127899999988 688899997766544
No 485
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.04 E-value=1.3e-09 Score=87.94 Aligned_cols=129 Identities=13% Similarity=0.173 Sum_probs=80.1
Q ss_pred CceeecCCCcEEEEEEEee--ecCCEEEEEeCC--E---ec---CC-----------CCCeEEEEeC--CEEEEEEcCCC
Q psy14060 141 QPCRAFEQDQARFEVEFDG--DPLPTIKWFRED--F---PI---TS-----------SPDFQIHTFS--TKSILIMRQVF 197 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g--~p~~~~~W~k~~--~---~~---~~-----------~~~~~~~~~~--~~~~l~i~~~~ 197 (283)
....+.+|++++|.|.+.+ .....+.|||.. . .+ .. ..++.+.... ...+|.|.++.
T Consensus 31 ~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (267)
T 3u1s_H 31 GAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLT 110 (267)
T ss_dssp CCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCC
T ss_pred CCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 3467899999999999975 245789999742 1 11 00 1345544332 34679999999
Q ss_pred CCCCEEEEEEEEeC------Cc------------e-e------EEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCC
Q psy14060 198 MEDSGVFAVIAENR------GG------------K-A------KCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQ 252 (283)
Q Consensus 198 ~~d~G~Y~C~a~n~------~g------------~-~------~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~ 252 (283)
.+|+|.|+|.+.+. .+ . . .....+.|.... ..+|.+........+..|+
T Consensus 111 ~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~l~V~~~~------~~~P~v~~~~~~~~~~~g~ 184 (267)
T 3u1s_H 111 ADDTAIYYCLTGSKHRLRDYFLYNEYGPNYEEWGDYLATLDVWGHGTAVTVSSAS------TKGPSVFPLAPSSKSTSGG 184 (267)
T ss_dssp GGGCEEEEEEEEEEEEEEEEEECCTTSSCEEEEEEEEEEEEEECCCEEEEECCCC------CBCCEEEEECCCGGGEETT
T ss_pred hhhCEEEEEEECcCCcccccccccccccccccccccccccceecCCeEEEecCCC------CCCCEEEEecCCcccCCCC
Confidence 99999999998621 01 0 0 012345554210 1355555322222335799
Q ss_pred eEEEEEEEEee-C-CCeeEEeeCCEEe
Q psy14060 253 LARFDAKISAT-K-PLDVYWLKVSSLS 277 (283)
Q Consensus 253 ~v~L~C~~~g~-p-~~~v~W~~~g~~l 277 (283)
.++|.|.+.+. | .+.+.| ||..+
T Consensus 185 ~~~l~C~~~~~~p~~~~v~W--~~~~~ 209 (267)
T 3u1s_H 185 TAALGCLVKDYFPEPVTVSW--NSGAL 209 (267)
T ss_dssp EEEEEEEEEEEBSSCCEEEE--GGGTB
T ss_pred cEEEEEEEeEEECCCeEEEE--CCccc
Confidence 99999999874 4 347999 66544
No 486
>1zxq_A ICAM-2, intercellular adhesion molecule-2; immunoglobulin fold, cell adhesion, glycoprotein, transmembr; HET: NAG; 2.20A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4
Probab=99.04 E-value=1.2e-08 Score=76.98 Aligned_cols=127 Identities=7% Similarity=0.101 Sum_probs=87.9
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCCE-EEEEeCCEecCCCCCeEEEEeCCEEEEEEcCCCCCCCEEEEEEEEeCCce
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPT-IKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGK 214 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~-~~W~k~~~~~~~~~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a~n~~g~ 214 (283)
+...+....+..|+++.|.|.+.. +.+. +.|--. + .+..+........+.|.++. |.|.|.|.+.-....
T Consensus 5 v~v~P~~~~V~~G~S~~l~Cs~~c-~~p~~~glet~---l---~~~~~~~g~~w~~l~l~~vs--~~g~~~C~~~c~~~~ 75 (192)
T 1zxq_A 5 VHVRPKKLAVEPKGSLEVNCSTTC-NQPEVGGLETS---L---NKILLDEQAQWKHYLVSNIS--HDTVLQCHFTCSGKQ 75 (192)
T ss_dssp EEEESSEEEECTTEEEEEEEEESC-SSCSEEEEECS---S---EEEEEEEETTEEEEEEEEEC--SCEEEEEEEEETTEE
T ss_pred EEEeCCCcEEeCCCcEEEEEECCC-CCccccccccc---c---CceEEcCCCCeEEEEEeccc--cCCeeEEEEECCCcc
Confidence 345566778899999999999965 5554 455321 1 11112223344569999998 789999999876666
Q ss_pred eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEe-eCCC--eeEEeeCCEEecCC
Q psy14060 215 AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISA-TKPL--DVYWLKVSSLSDVK 280 (283)
Q Consensus 215 ~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g-~p~~--~v~W~~~g~~l~~~ 280 (283)
....+.|.|... |-.....+.+..+.+|+.++|.|.+.+ .|.. ++.|+++++.|..+
T Consensus 76 ~~~~~~itVy~~---------P~~v~i~~~p~~~~~G~~~tL~C~v~~v~P~~~L~v~llrG~~~l~~~ 135 (192)
T 1zxq_A 76 ESMNSNVSVYQP---------PRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFRGNETLHYE 135 (192)
T ss_dssp EEEEEEEEECBC---------CCCCEEEEESSEECTTSEEEEEEEECSCBCGGGEEEEEEETTEEEEEE
T ss_pred eEEEEEEEEEeC---------CCCceEccCCccccCCCcEEEEEEeCCeECCCCcEEEEEcCCEEeeec
Confidence 777888888762 223333323446899999999999975 5655 48999999998644
No 487
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.04 E-value=2.1e-09 Score=90.45 Aligned_cols=118 Identities=14% Similarity=0.054 Sum_probs=75.5
Q ss_pred CEEEEEEccCCCCCCeEEEEEEEeccee-eeeeccCCCCCCeEEecCCcee-ecCCC-cEEEEEEEeee-cC--CEEEEE
Q psy14060 95 KIQERVVDASELDDDGYYAITERKYYAL-SDLSEQKPAKPPVFTKKIQPCR-AFEQD-QARFEVEFDGD-PL--PTIKWF 168 (283)
Q Consensus 95 ~~~~L~i~~~~~~D~G~Y~C~a~n~~~~-~~~~~~~~~~~p~~~~~~~~~~-~~~g~-~v~l~C~~~g~-p~--~~~~W~ 168 (283)
+..+|.|.+++.+|+|.|.|.+.+..+. .....+.+..+|.+...+.... +..|+ .++|.|.+.+. |. +.++|+
T Consensus 252 g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~pP~V~v~p~~~~~~~~G~~~vtL~C~a~GfyP~~~~~VtW~ 331 (401)
T 3f8u_B 252 GNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYKPPKVSLMPATLARAAPGEAPPELLCLVSHFYPSGGLEVEWE 331 (401)
T ss_dssp EEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEBCCEEEEESSSCCCCCTTCCCCCEEEEEEEEBSSTTCEEEEE
T ss_pred CcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeeccCCeEeeccCcceeecCCCccEEEEEEecCCcCCCCcEEEEE
Confidence 5689999999999999999999887653 2334455556787766555444 45676 79999999885 65 799995
Q ss_pred -eCCE---ecCCCC-----CeEEEEeCC---EEEEEEcCCCC-CCCEEEEEEEEeCC
Q psy14060 169 -REDF---PITSSP-----DFQIHTFST---KSILIMRQVFM-EDSGVFAVIAENRG 212 (283)
Q Consensus 169 -k~~~---~~~~~~-----~~~~~~~~~---~~~l~i~~~~~-~d~G~Y~C~a~n~~ 212 (283)
+++. .+.... ......++. .+.|.+..... .+.+.|+|.+.|..
T Consensus 332 ~rdg~~g~~~~~~~~~~~s~~~~~~DGTysvsS~L~V~~~~~e~~g~~YTC~V~H~s 388 (401)
T 3f8u_B 332 LRGGPGGRSQKAEGQRWLSALRHHSDGSVSLSGHLQPPPVTTEQHGARYACRIHHPS 388 (401)
T ss_dssp EESSSSCSCEECCSEEEECCCEECTTSCEEEEEEEECCCCCGGGTTCEEEEEEECTT
T ss_pred ecCCCCCceecccccccccccccCCCceEEEEEEEEEccCccccCCCEEEEEEEcCC
Confidence 7652 111100 000000111 22455555432 34459999999876
No 488
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.03 E-value=1.2e-09 Score=76.16 Aligned_cols=64 Identities=14% Similarity=0.203 Sum_probs=51.6
Q ss_pred eeeecCcEEEEEEEccCccce-EE------eecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEeccee
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-RK------ITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYAL 122 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-~~------~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~ 122 (283)
.+.+|+.++|.|.+.|.|... .| +....++.+........|.|.+++.+|+|.|+|.+.|..+.
T Consensus 18 ~v~~G~~v~l~C~~~g~p~p~i~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~~g~ 88 (114)
T 2cqv_A 18 KVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTILAARQEHCGCYTLLVENKLGS 88 (114)
T ss_dssp EEETTCCEEEEEEEESSSSCEEEEEESSSBCCCSSSEEEEECSSEEEEEETTCCTTTCEEEEEEEECSSCE
T ss_pred EEeCCCeEEEEEEEEcCCCCEEEEEECCEECcCCCCEEEEEcCCEEEEEECCCChhcCEEEEEEEEECCCc
Confidence 467788999999999988433 33 33445777776666889999999999999999999999884
No 489
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.02 E-value=6.2e-10 Score=75.70 Aligned_cols=73 Identities=15% Similarity=0.256 Sum_probs=55.0
Q ss_pred eeeecCcEEEEEEEccCc--cce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceeeeeeccCCC
Q psy14060 59 EIHTAKSQQVQKEKKGDK--EIV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALSDLSEQKPA 131 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~--~i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~~~~~~~~~ 131 (283)
.+.+|+.+.|.|.+ .| .+. ..+..+.++.+...+....|.|.+++.+|+|.|+|.|.|. .......+.+.
T Consensus 18 ~v~~G~~v~l~C~v--~p~p~v~W~k~g~~l~~~~r~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~N~-~~~~~a~L~V~ 94 (100)
T 2yuz_A 18 TVNLGKEICLKCEI--SENIPGKWTKNGLPVQESDRLKVVQKGRIHKLVIANALTEDEGDYVFAPDAY-NVTLPAKVHVI 94 (100)
T ss_dssp EEETTSCCCEEEEC--SSCCCEEEEETTEECCCCSSEEEEECSSEEEEEESSCCGGGCSEEEEEESSS-CCCEEEEEEEE
T ss_pred EEcCCCCEEEEEEe--CCCCeEEEEECCEECCCCCcEEEEEeCCEEEEEECCCChhhCEEEEEEEcCC-CeeEEEEEEEe
Confidence 47788899999999 44 443 4556677888888888899999999999999999999998 32223334444
Q ss_pred CCC
Q psy14060 132 KPP 134 (283)
Q Consensus 132 ~~p 134 (283)
.+|
T Consensus 95 ~~P 97 (100)
T 2yuz_A 95 SGP 97 (100)
T ss_dssp CCS
T ss_pred CCC
Confidence 444
No 490
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.01 E-value=3.1e-09 Score=73.40 Aligned_cols=77 Identities=12% Similarity=0.132 Sum_probs=59.7
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--E---ecC---------CCCCeEEEEeCCEEEEEEcCCCCCC
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--F---PIT---------SSPDFQIHTFSTKSILIMRQVFMED 200 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d 200 (283)
.+...+..+.+.+|++++|.|.+.+.+.+.+.|||+. . .+. ...++.+.......+|.|.++..+|
T Consensus 5 ~v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~D 84 (109)
T 2q20_A 5 QMTQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSGSGTDFTFTISSLQPED 84 (109)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEESSCCGGG
T ss_pred cEEeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEeccCCEEEEEECCCChhh
Confidence 4455567788999999999999988777899999863 1 110 1245666555667789999999999
Q ss_pred CEEEEEEEEeC
Q psy14060 201 SGVFAVIAENR 211 (283)
Q Consensus 201 ~G~Y~C~a~n~ 211 (283)
+|.|+|.+.+.
T Consensus 85 sG~Y~C~~~~~ 95 (109)
T 2q20_A 85 IATYYCQQYDN 95 (109)
T ss_dssp CEEEEEEECSS
T ss_pred CEEEEEEEeeC
Confidence 99999999764
No 491
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.01 E-value=3.8e-10 Score=75.26 Aligned_cols=63 Identities=14% Similarity=0.208 Sum_probs=50.8
Q ss_pred eecCcEEEEEEEccCc-cce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecceee
Q psy14060 61 HTAKSQQVQKEKKGDK-EIV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYALS 123 (283)
Q Consensus 61 ~~g~~v~l~C~~~g~~-~i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~~~ 123 (283)
.+|+.++|.|.+.+.+ .+. +.+..+.++.+...+....|.|.+++.+|+|.|+|.|.|..+..
T Consensus 19 ~~g~~v~l~C~v~~p~~~v~W~k~g~~i~~~~~~~i~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~~~ 87 (91)
T 2lvc_A 19 ITSECVMLACEVDREDAPVRWYKDGQEVEESDFVVLENEGPHRRLVLPATQPSDGGEFQCVAGDECAYF 87 (91)
T ss_dssp CTTCCEEEEEECSCTTSCCEEEETTSCCCCCSSCEEEEETTEEEEEESSCCGGGCSEEEEECSSCEEEE
T ss_pred ECCCcEEEEEEECCCCcEEEEEECCEEeeeeeeeeEEecCCeEEEEeCCCChhhcEEEEEEEcceEEEE
Confidence 4688999999997733 443 34556778888888889999999999999999999998875543
No 492
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.00 E-value=2.3e-08 Score=77.83 Aligned_cols=150 Identities=9% Similarity=0.032 Sum_probs=92.9
Q ss_pred eeecCcEEEEEEEccCc--cce----------EEee---------cCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEe
Q psy14060 60 IHTAKSQQVQKEKKGDK--EIV----------RKIT---------ATETTEMEHKGKIQERVVDASELDDDGYYAITERK 118 (283)
Q Consensus 60 v~~g~~v~l~C~~~g~~--~i~----------~~~~---------~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n 118 (283)
+..|+.|+|.|....+- .+. +.|. ..+|+.-...+...+|+|.++..+|++.|.|...+
T Consensus 13 ~s~G~~vtisC~~S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~Sgt~ftLtIs~lq~eD~A~YyC~~~~ 92 (259)
T 4f9l_D 13 ASLGDTITITCHASQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSGSATGFTLTISSLQPEDIATYYCQQGH 92 (259)
T ss_dssp BCTTCEEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEEETTEEEEEEESCCGGGCEEEEEEECS
T ss_pred ECCCCCEEEEEEcCCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeeccCCeEEEEEcccChhhCEEEEEeecC
Confidence 56788999999875332 111 2221 12466666677889999999999999999997654
Q ss_pred cc----eeeeeeccCCC-CCCeE-------------------EecCCceeecCCCcEEEEEEEeeec--CCEEEEEeC--
Q psy14060 119 YY----ALSDLSEQKPA-KPPVF-------------------TKKIQPCRAFEQDQARFEVEFDGDP--LPTIKWFRE-- 170 (283)
Q Consensus 119 ~~----~~~~~~~~~~~-~~p~~-------------------~~~~~~~~~~~g~~v~l~C~~~g~p--~~~~~W~k~-- 170 (283)
.. |......++.. .+|.. +.......+.+|+++.|.|.++|.. ...+.|+|.
T Consensus 93 ~~~~tFG~GTkLeikr~~aa~~~s~~~~s~~a~ssGv~sqvqL~eSG~~lvkPG~Sl~LSC~aSG~tfs~y~~~WvRQaP 172 (259)
T 4f9l_D 93 SYPYTFGGGTKLDIKRADAGGGGSGGGGSGGGGSGGGGSQVQLQESGAELVKPGASVKLSCKASGYTFTRYYLYWVKQRP 172 (259)
T ss_dssp SSSCCBCCCCEECBCCC----------------------CCCEEEECCCEEESSSCEEEEEEEESSCGGGSCEEEEEECT
T ss_pred CCCCCccCCeEEEEeccccCccccccccccccccCCccccceEEeECCCEECCCCcEEEEEeeeCCCcccCcEEEEEECC
Confidence 32 21111111111 01110 1111223578899999999999853 346788874
Q ss_pred CEe------cC-C----------CCCeEEEEeC--CEEEEEEcCCCCCCCEEEEEEEE
Q psy14060 171 DFP------IT-S----------SPDFQIHTFS--TKSILIMRQVFMEDSGVFAVIAE 209 (283)
Q Consensus 171 ~~~------~~-~----------~~~~~~~~~~--~~~~l~i~~~~~~d~G~Y~C~a~ 209 (283)
|+. |. . ..++.+..+. +...|.+.+++.+|.+.|+|...
T Consensus 173 GkgLEwvg~I~~~~g~t~Ya~svkGRfTISrD~s~nt~yLqm~sL~~eDTAvYYCAr~ 230 (259)
T 4f9l_D 173 GQGLEWIGEINPNNGGTKFNEKFKSKATLTVDKSSRTTYIQLSSLTSEDSAVYYCSRE 230 (259)
T ss_dssp TSCEEEEEEECTTTCCEEECTTSTTTEEEEEETTTTEEEEEECSCCGGGCEEEEEEEE
T ss_pred CCceEEEeEEeCCCCceEecHhhcCCEEEEEEccccEEEEEECCCChHHCEEEEEEEe
Confidence 221 11 1 1356666554 35578999999999999999754
No 493
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=99.00 E-value=2.3e-09 Score=83.83 Aligned_cols=133 Identities=15% Similarity=0.170 Sum_probs=84.4
Q ss_pred EecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--EecC----------CCCCeEEEE--eCCEEEEEEcCCCCCCCE
Q psy14060 137 TKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--FPIT----------SSPDFQIHT--FSTKSILIMRQVFMEDSG 202 (283)
Q Consensus 137 ~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~~~~----------~~~~~~~~~--~~~~~~l~i~~~~~~d~G 202 (283)
...+..+.+.+|++++|.|.+.+. ...+.|||.. .... ...++.+.. ......|.|.++..+|+|
T Consensus 5 ~Q~p~~v~v~~G~sVtL~C~~s~~-~~~v~Wyrq~pg~~~~~l~~~~~~~~~~~Rfs~~~~~~~~~~sLtI~~lq~~DSG 83 (229)
T 3mbe_C 5 EQNPPALSLYEGADSGLRCNFSTT-MKSVQWFQQNHRGRLITLFYLAQGTKENGRLKSTFNSKERYSTLHIKDAQLEDSG 83 (229)
T ss_dssp EEECSEEEEETTCCEEEEEEESSC-CSCEEEEEECSSSCBCCCEEESSEEEEETTEEEEEETTTTEEEEEECSCCSTTCB
T ss_pred EEcCCEEEEEcCCCEEEEEEEeCC-CcEEEEEEECCCCCcEEEEEeCCCCccCCCEEEEECCCCCEEEEEEECCcccCCC
Confidence 445666789999999999999876 6689999842 2111 123444442 234678999999999999
Q ss_pred EEEEEEEeCC--ce--eEEEEEEEEEeccCCCCCCCCCCeEEecCCceEEcCCCeEEEEEEEEeeCCC-eeEEeeCCEEe
Q psy14060 203 VFAVIAENRG--GK--AKCSANLVVEEKRQGGRGGVVPPSFLTTISSAVINVGQLARFDAKISATKPL-DVYWLKVSSLS 277 (283)
Q Consensus 203 ~Y~C~a~n~~--g~--~~~~~~l~v~~~~~~~~~~~~~p~~~~~~~~~~v~~g~~v~L~C~~~g~p~~-~v~W~~~g~~l 277 (283)
.|+|.+.... .. ...-..|.|..... ..+|.+.... .....++|.|.+.+..+. .+.|+++|..+
T Consensus 84 ~Y~Ca~~~~~~~~~~~fG~GT~L~V~~~~~-----~p~P~Vf~~~-----~~~~~vtl~Cl~~gf~P~i~v~~~~~~~~~ 153 (229)
T 3mbe_C 84 TYFCAAEDGGSGNKLIFGTGTLLSVKPNIQ-----NPEPAVYQLK-----DPRSQDSTLCLFTDFDSQINVPKTMESGTF 153 (229)
T ss_dssp EEEEEEECSSSTTCEEECCCCEEEEECCCS-----SCCCEEEEEE-----CTTCTTCEEEEEESCCSSSCCCCCCSSSEE
T ss_pred CEEEEEEeCCCcccceeCCCEEEEEecccC-----CCCCEEEEcc-----CCCCCEEEEEEccccCCceEeEeeccCceE
Confidence 9999997532 11 11113566664210 0133333211 111348899999985444 69999999877
Q ss_pred cCC
Q psy14060 278 DVK 280 (283)
Q Consensus 278 ~~~ 280 (283)
...
T Consensus 154 ~~~ 156 (229)
T 3mbe_C 154 ITD 156 (229)
T ss_dssp ECC
T ss_pred ecC
Confidence 543
No 494
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=98.99 E-value=2.1e-09 Score=75.53 Aligned_cols=77 Identities=12% Similarity=0.133 Sum_probs=59.6
Q ss_pred eEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--E---ecC---------CCCCeEEEEeCCEEEEEEcCCCCCC
Q psy14060 135 VFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--F---PIT---------SSPDFQIHTFSTKSILIMRQVFMED 200 (283)
Q Consensus 135 ~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d 200 (283)
.+...+..+.+.+|++++|.|.+.+.+.+.+.|||.. . .+. ...++.+.......+|.|.++..+|
T Consensus 5 ~v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~L~I~~v~~~D 84 (119)
T 2e27_L 5 QMTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSGSGRDYSFSISNLEPED 84 (119)
T ss_dssp CEEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEECSCCGGG
T ss_pred eeEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEccCCEEEEEECCCChHH
Confidence 3445567788999999999999988777899999853 1 110 1245666555667789999999999
Q ss_pred CEEEEEEEEeC
Q psy14060 201 SGVFAVIAENR 211 (283)
Q Consensus 201 ~G~Y~C~a~n~ 211 (283)
+|.|+|.+.|.
T Consensus 85 sG~Y~C~~~~~ 95 (119)
T 2e27_L 85 AATYYCLQYDN 95 (119)
T ss_dssp CEEEEEEECGG
T ss_pred CEEEEEEEccC
Confidence 99999999874
No 495
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=98.99 E-value=6.3e-09 Score=72.11 Aligned_cols=75 Identities=15% Similarity=0.232 Sum_probs=56.9
Q ss_pred EEecCCceeecCCCcEEEEEEEeee--cCCEEEEEeCC--E----ecCCCCCeEEEEe--CCEEEEEEcCCCCCCCEEEE
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGD--PLPTIKWFRED--F----PITSSPDFQIHTF--STKSILIMRQVFMEDSGVFA 205 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~--p~~~~~W~k~~--~----~~~~~~~~~~~~~--~~~~~l~i~~~~~~d~G~Y~ 205 (283)
+...+..+.+.+|++++|.|.+.+. +.+.+.|||+. . .+....++.+... .....|.|.++..+|+|.|+
T Consensus 3 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~DsG~Y~ 82 (111)
T 2ywz_A 3 VDQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTISIGGRYDETVDKGSKSFSLRISDLRVEDSGTYK 82 (111)
T ss_dssp EEEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEECCSBTTEEEEEETTTTEEEEEECSCCGGGCEEEE
T ss_pred eEECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEeeEeCCCEEEEEeCCCCEEEEEECCCChhcCEEEE
Confidence 3445677889999999999999875 46789999852 2 2323345554332 34678999999999999999
Q ss_pred EEEEe
Q psy14060 206 VIAEN 210 (283)
Q Consensus 206 C~a~n 210 (283)
|.+.+
T Consensus 83 C~~~~ 87 (111)
T 2ywz_A 83 CQADY 87 (111)
T ss_dssp EEEEE
T ss_pred EEEEc
Confidence 99988
No 496
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=98.98 E-value=1.2e-09 Score=94.65 Aligned_cols=90 Identities=19% Similarity=0.304 Sum_probs=70.7
Q ss_pred CCeEEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCCEe-cCCC---CCeEEEEeCCEEEEEEcCCCCCCCEEEEEEE
Q psy14060 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFP-ITSS---PDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 208 (283)
Q Consensus 133 ~p~~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~~~-~~~~---~~~~~~~~~~~~~l~i~~~~~~d~G~Y~C~a 208 (283)
+|.+...+....+.+|+.++|.|.+ +.|.|.+.|++++.. +... .++.+... .+|.|.+++.+|+|.|+|.|
T Consensus 341 ~P~i~~~~~~~~v~~G~~v~L~C~~-~~p~p~i~W~~~~~~~~~~~~~~~~~~~~~~---~~L~I~~v~~~D~G~Y~C~a 416 (440)
T 3zyj_A 341 APVIVEPPADLNVTEGMAAELKCRA-STSLTSVSWITPNGTVMTHGAYKVRIAVLSD---GTLNFTNVTVQDTGMYTCMV 416 (440)
T ss_dssp CCCEEECCCCEEECTTSCCEECCEE-SSTTSEEEEECTTSCEEESSSCCSSEEECTT---CCEEESSCCSTTCEEEEEEE
T ss_pred CCcccccccceeeccCceEEEEeec-CCCCCceEEEeCCCceeeccCCCceEEEccC---CeEEEccCChhhCEEEEEEE
Confidence 6777777888899999999999999 568999999995543 3222 13333222 35999999999999999999
Q ss_pred EeCCceeEEEEEEEEEec
Q psy14060 209 ENRGGKAKCSANLVVEEK 226 (283)
Q Consensus 209 ~n~~g~~~~~~~l~v~~~ 226 (283)
.|..|....++.+.|.+.
T Consensus 417 ~N~~G~~~~~~~~~v~~~ 434 (440)
T 3zyj_A 417 SNSVGNTTASATLNVTGT 434 (440)
T ss_dssp ECSSCEEEEEEEEEEC--
T ss_pred EcCCCcEEEEEEEEEecc
Confidence 999999999999988763
No 497
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.98 E-value=2.5e-09 Score=73.23 Aligned_cols=63 Identities=13% Similarity=0.157 Sum_probs=51.1
Q ss_pred eeeecCcEEEEEEEccCc-c--ce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecce
Q psy14060 59 EIHTAKSQQVQKEKKGDK-E--IV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYA 121 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~-~--i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~ 121 (283)
.+.+|+.++|.|.+.+.+ . +. ..+....++.+...+....|.|.+++.+|+|.|+|.+.|...
T Consensus 19 ~v~~G~~v~l~C~v~~~~~~~~v~W~k~g~~i~~~~r~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~~~~~ 89 (104)
T 2eny_A 19 EVLEGESCSFECVLSHESASDPAMWTVGGKTVGSSSRFQATRQGRKYILVVREAAPSDAGEVVFSVRGLTS 89 (104)
T ss_dssp EEESSCCEEEEEECSSCCCSSCBCCBSSSSBCSBCSSCEEEEETTEEEEEECSCCTTTCSCEEEEETTEEE
T ss_pred EEcCCCcEEEEEEEcCCCCCceeEEEECCEECCCCCCEEEEEcCCEEEEEECCCCHHHCEEEEEEECCeeE
Confidence 577889999999999876 3 33 344556678888778889999999999999999999876543
No 498
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=98.98 E-value=2.6e-09 Score=73.53 Aligned_cols=76 Identities=11% Similarity=0.187 Sum_probs=58.6
Q ss_pred EEecCCceeecCCCcEEEEEEEeeecCCEEEEEeCC--E---ecC---------CCCCeEEEEeCCEEEEEEcCCCCCCC
Q psy14060 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFRED--F---PIT---------SSPDFQIHTFSTKSILIMRQVFMEDS 201 (283)
Q Consensus 136 ~~~~~~~~~~~~g~~v~l~C~~~g~p~~~~~W~k~~--~---~~~---------~~~~~~~~~~~~~~~l~i~~~~~~d~ 201 (283)
+...+..+.+.+|++++|.|.+.+.+.+.+.|||.. . .+. ...++.+........|.|.++..+|+
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~L~I~~v~~~Ds 83 (107)
T 1i8k_A 4 LTQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSGTGTDFVFTIENTLSEDV 83 (107)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEEETTEEEEEESSCCGGGC
T ss_pred eEeCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEccCCEEEEEECCCCHHHC
Confidence 344566788999999999999988777889999853 1 110 12456665556677899999999999
Q ss_pred EEEEEEEEeC
Q psy14060 202 GVFAVIAENR 211 (283)
Q Consensus 202 G~Y~C~a~n~ 211 (283)
|.|+|.+.+.
T Consensus 84 G~Y~C~~~~~ 93 (107)
T 1i8k_A 84 GDYYCLQSFN 93 (107)
T ss_dssp EEEEEEECSS
T ss_pred EEEEEEEeeC
Confidence 9999999764
No 499
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=98.98 E-value=6.5e-09 Score=69.46 Aligned_cols=85 Identities=13% Similarity=0.300 Sum_probs=60.6
Q ss_pred CceeecCCCcEEEEEEEee-ecCCEEEEEeCC----EecCCCCCe--EEEEeC--CEEEEEEcCCCCCCCEEEEEEEEeC
Q psy14060 141 QPCRAFEQDQARFEVEFDG-DPLPTIKWFRED----FPITSSPDF--QIHTFS--TKSILIMRQVFMEDSGVFAVIAENR 211 (283)
Q Consensus 141 ~~~~~~~g~~v~l~C~~~g-~p~~~~~W~k~~----~~~~~~~~~--~~~~~~--~~~~l~i~~~~~~d~G~Y~C~a~n~ 211 (283)
+...+..|+++.|.|.+.+ .+.|+++|.|.+ ..+...... .....+ ....|+|.++...|+|.|+|.|.+.
T Consensus 22 S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsAn~~ 101 (122)
T 1xau_A 22 SKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVGPQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCSTNFN 101 (122)
T ss_dssp EEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCBTTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEEEET
T ss_pred ccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccceeeecceeccCCceeEEEEEeeEEEcCCccEEEEeeCC
Confidence 4467899999999999976 479999999976 333322211 122111 3558999999999999999999998
Q ss_pred CceeEEE-EEEEEEe
Q psy14060 212 GGKAKCS-ANLVVEE 225 (283)
Q Consensus 212 ~g~~~~~-~~l~v~~ 225 (283)
.|...+. ..|.|.+
T Consensus 102 ~g~ieSHs~ti~V~~ 116 (122)
T 1xau_A 102 SQVINSHSVTIHVRE 116 (122)
T ss_dssp TEEEECCCEEEEEC-
T ss_pred CCceeeeEEEEEEEe
Confidence 8875543 4555543
No 500
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=98.97 E-value=2.3e-09 Score=73.86 Aligned_cols=63 Identities=13% Similarity=0.118 Sum_probs=51.0
Q ss_pred eeeecCcEEEEEEEccCccce-----EEeecCCCEEEEEcCCEEEEEEccCCCCCCeEEEEEEEecce
Q psy14060 59 EIHTAKSQQVQKEKKGDKEIV-----RKITATETTEMEHKGKIQERVVDASELDDDGYYAITERKYYA 121 (283)
Q Consensus 59 ~v~~g~~v~l~C~~~g~~~i~-----~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~Y~C~a~n~~~ 121 (283)
.+.+|+.++|.|.+.+.|.+. ..+....++.+...+....|.|.+++.+|+|.|+|.+.|...
T Consensus 19 ~v~~G~~v~l~C~~~~~p~v~W~k~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~~~ 86 (108)
T 2dm7_A 19 EASEGATATLQCELSKVAPVEWKKGPETLRDGGRYSLKQDGTRCELQIHDLSVADAGEYSCMCGQERT 86 (108)
T ss_dssp EEETTSCEEEEEEBSSSCCCEEESSSSBCCSSSSCEEEEETTEEEEEESSCCTTTCSEEEEEETTEEE
T ss_pred EEeCCCcEEEEEEeCCCCeeEEEECCEECCCCCCEEEEecCCEEEEEECCCCcccCEEEEEEEcCCEE
Confidence 477788999999999888664 234445677777777888999999999999999999966533
Done!