RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy14060
(283 letters)
>d2cqva1 b.1.1.4 (A:8-108) Telokin {Human (Homo sapiens) [TaxId:
9606]}
Length = 101
Score = 78.0 bits (191), Expect = 5e-19
Identities = 19/106 (17%), Positives = 35/106 (33%), Gaps = 7/106 (6%)
Query: 134 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIM 193
P + + + + + G T W + I S ++ S L +
Sbjct: 1 PQIIQFPEDQKVRAGESVELFGKVTGTQPITCTWMKFRKQIQESEHMKVENSENGSKLTI 60
Query: 194 RQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPSF 239
E G + ++ EN+ G + NL V +K PP+
Sbjct: 61 LAARQEHCGCYTLLVENKLGSRQAQVNLTVVDKPD-------PPAG 99
Score = 28.7 bits (63), Expect = 0.28
Identities = 6/34 (17%), Positives = 13/34 (38%)
Query: 237 PSFLTTISSAVINVGQLARFDAKISATKPLDVYW 270
P + + G+ K++ T+P+ W
Sbjct: 1 PQIIQFPEDQKVRAGESVELFGKVTGTQPITCTW 34
>d1fhga_ b.1.1.4 (A:) Telokin {Turkey (Meleagris gallopavo) [TaxId:
9103]}
Length = 102
Score = 72.2 bits (176), Expect = 8e-17
Identities = 35/101 (34%), Positives = 51/101 (50%), Gaps = 1/101 (0%)
Query: 126 SEQKPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 185
+E+KP P FTK I E ARF+ + +G P P + WF++D P+ S FQI
Sbjct: 1 AEEKPHVKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMWFKDDNPVKESRHFQIDYD 60
Query: 186 -STKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225
L + +V +D + A N G+A C+A L+VE
Sbjct: 61 EEGNCSLTISEVCGDDDAKYTCKAVNSLGEATCTAELLVET 101
Score = 29.9 bits (66), Expect = 0.12
Identities = 13/36 (36%), Positives = 16/36 (44%)
Query: 235 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYW 270
V P F TI + G ARFD K+ +V W
Sbjct: 7 VKPYFTKTILDMEVVEGSAARFDCKVEGYPDPEVMW 42
>d1koaa1 b.1.1.4 (A:6265-6361) Twitchin {Nematode (Caenorhabditis
elegans) [TaxId: 6239]}
Length = 97
Score = 71.1 bits (173), Expect = 2e-16
Identities = 20/93 (21%), Positives = 31/93 (33%)
Query: 134 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIM 193
P F K E A F P + W ++D + S + L +
Sbjct: 2 PRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTWHKDDRELKQSVKYMKRYNGNDYGLTI 61
Query: 194 RQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 226
+V +D G + V A+N G + L V
Sbjct: 62 NRVKGDDKGEYTVRAKNSYGTKEEIVFLNVTRH 94
Score = 27.9 bits (61), Expect = 0.44
Identities = 10/34 (29%), Positives = 15/34 (44%)
Query: 237 PSFLTTISSAVINVGQLARFDAKISATKPLDVYW 270
P F+ + GQ A F ++ A+ P V W
Sbjct: 2 PRFIVKPYGTEVGEGQSANFYCRVIASSPPVVTW 35
>d1g1ca_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 98
Score = 70.7 bits (172), Expect = 2e-16
Identities = 26/96 (27%), Positives = 38/96 (39%), Gaps = 1/96 (1%)
Query: 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQ-IHTFSTKSI 190
+ P ++IQ + A F V G P P +W++ I S
Sbjct: 3 EAPKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNGVKIERSDRIYWYWPEDNVCE 62
Query: 191 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 226
L++R V EDS V A N G+ A L+V+ K
Sbjct: 63 LVIRDVTGEDSASIMVKAINIAGETSSHAFLLVQAK 98
Score = 29.5 bits (65), Expect = 0.14
Identities = 7/35 (20%), Positives = 11/35 (31%)
Query: 236 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYW 270
P I S + G A F ++ + W
Sbjct: 4 APKIFERIQSQTVGQGSDAHFRVRVVGKPDPECEW 38
>d3dara1 b.1.1.4 (A:153-249) Fibroblast growth factor receptor, FGFR
{Human (Homo sapiens), FGFR2a [TaxId: 9606]}
Length = 97
Score = 67.1 bits (163), Expect = 5e-15
Identities = 19/93 (20%), Positives = 33/93 (35%), Gaps = 3/93 (3%)
Query: 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS-TKSI 190
K++ A + +F G+P+PT++W + +
Sbjct: 6 NTEKMEKRLHAVPA--ANTVKFRCPAGGNPMPTMRWLKNGKEFKQEHRIGGYKVRNQHWS 63
Query: 191 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223
LIM V D G + + EN G + +L V
Sbjct: 64 LIMESVVPSDKGNYTCVVENEYGSINHTYHLDV 96
>d1tnna_ b.1.1.4 (A:) Titin {Human (Homo sapiens), different modules
[TaxId: 9606]}
Length = 91
Score = 66.0 bits (160), Expect = 1e-14
Identities = 26/90 (28%), Positives = 46/90 (51%)
Query: 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQ 195
K + +E + ARF + DG+P+PT+ W R+ +++S Q+ T KS +
Sbjct: 2 ILTKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQVLSTSARHQVTTTKYKSTFEISS 61
Query: 196 VFMEDSGVFAVIAENRGGKAKCSANLVVEE 225
V D G ++V+ EN GK + L +++
Sbjct: 62 VQASDEGNYSVVVENSEGKQEAEFTLTIQK 91
>d1cs6a4 b.1.1.4 (A:300-388) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 89
Score = 63.7 bits (154), Expect = 8e-14
Identities = 24/91 (26%), Positives = 40/91 (43%), Gaps = 4/91 (4%)
Query: 134 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIM 193
P + I A R+ G P P ++W R+ P+ S ++ L
Sbjct: 2 PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRWLRDGQPLASQNRIEVSGG----ELRF 57
Query: 194 RQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224
++ +EDSG++ +AEN+ G SA L V+
Sbjct: 58 SKLVLEDSGMYQCVAENKHGTVYASAELTVQ 88
Score = 28.7 bits (63), Expect = 0.25
Identities = 8/34 (23%), Positives = 13/34 (38%)
Query: 237 PSFLTTISSAVINVGQLARFDAKISATKPLDVYW 270
P +L I+ ++G R+ S V W
Sbjct: 2 PDWLDVITDTEADIGSDLRWSCVASGKPRPAVRW 35
>d1qz1a3 b.1.1.4 (A:190-289) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 100
Score = 63.4 bits (153), Expect = 1e-13
Identities = 26/98 (26%), Positives = 38/98 (38%), Gaps = 4/98 (4%)
Query: 133 PPVFTKKIQP--CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS--PDFQIHTFSTK 188
PP + A + DG P PT+ W ++ PI + D +
Sbjct: 3 PPTVQARQSIVNATANLGQSVTLVCDADGFPEPTMSWTKDGEPIENEEEDDEKHIFSDDS 62
Query: 189 SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 226
S L +R V D + IAEN+ G+ S +L V K
Sbjct: 63 SELTIRNVDKNDEAEYVCIAENKAGEQDASIHLKVFAK 100
>d2avga1 b.1.1.4 (A:1-110) Cardiac myosin binding protein C,
different domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 110
Score = 61.2 bits (147), Expect = 1e-12
Identities = 17/105 (16%), Positives = 29/105 (27%), Gaps = 12/105 (11%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPL---PTIKWFREDFPITSSPD---------F 180
+F + Q F G L P +KWF+ + SS +
Sbjct: 4 IGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGKWVDLSSKVGQHLQLHDSY 63
Query: 181 QIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225
+ L + +G + + + NL V E
Sbjct: 64 DRASKVYLFELHITDAQPAFTGGYRCEVSTKDKFDCSNFNLTVHE 108
>d1wiua_ b.1.1.4 (A:) Twitchin {Nematode (Caenorhabditis elegans)
[TaxId: 6239]}
Length = 93
Score = 58.8 bits (141), Expect = 5e-12
Identities = 18/92 (19%), Positives = 35/92 (38%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 192
P + + EV+F G P PT W D +P+ + S+ + +
Sbjct: 2 KPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAALAPELLVDAKSSTTSIF 61
Query: 193 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224
DSG + + +N G+ + ++V+
Sbjct: 62 FPSAKRADSGNYKLKVKNELGEDEAIFEVIVQ 93
Score = 28.8 bits (63), Expect = 0.20
Identities = 6/36 (16%), Positives = 8/36 (22%)
Query: 235 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYW 270
+ P LT I G + W
Sbjct: 1 LKPKILTASRKIKIKAGFTHNLEVDFIGAPDPTATW 36
>d1biha4 b.1.1.4 (A:307-395) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 89
Score = 58.2 bits (140), Expect = 6e-12
Identities = 15/92 (16%), Positives = 29/92 (31%), Gaps = 6/92 (6%)
Query: 133 PPVFTKKIQ-PCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSIL 191
P + +K + + + G P P + W P++ + L
Sbjct: 2 APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHNAKPLSGGRATVTDSG-----L 56
Query: 192 IMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223
+++ V D G + A N G + V
Sbjct: 57 VIKGVKNGDKGYYGCRATNEHGDKYFETLVQV 88
>d1x44a1 b.1.1.4 (A:8-97) Myosin-binding protein C, slow-type {Human
(Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 58.3 bits (140), Expect = 6e-12
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 7/93 (7%)
Query: 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDF--QIHTFSTKSILIM 193
TK+++ A+ ++ E E + +KWF+ I P +I K ILI+
Sbjct: 3 VTKQLEDTTAYCGERVELECEV-SEDDANVKWFKNGEEIIPGPKSRYRIRVEGKKHILII 61
Query: 194 RQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 226
D+ ++V+ + SA L V+ K
Sbjct: 62 EGATKADAAEYSVMTTG----GQSSAKLSVDLK 90
>d1pd6a_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 94
Score = 58.3 bits (140), Expect = 8e-12
Identities = 25/101 (24%), Positives = 39/101 (38%), Gaps = 9/101 (8%)
Query: 127 EQKPAKPPVFTKKIQPC-RAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTF 185
++K K F KK++P + + + R VE D +KW + I S I
Sbjct: 1 DEK--KSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNGQEIQMSGSKYIFES 57
Query: 186 S-TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225
K L + Q + D + + KCS L V+E
Sbjct: 58 IGAKRTLTISQCSLADDAAYQCVVGG----EKCSTELFVKE 94
>d1cs6a3 b.1.1.4 (A:209-299) Axonin-1 {Chicken (Gallus gallus)
[TaxId: 9031]}
Length = 91
Score = 57.5 bits (138), Expect = 1e-11
Identities = 21/92 (22%), Positives = 35/92 (38%), Gaps = 6/92 (6%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 192
P + K A E G+P+P IKW + D S++ +L
Sbjct: 5 PSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGS------QTSKWLSSEPLLH 58
Query: 193 MRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224
++ V ED G + AEN G+ +++
Sbjct: 59 IQNVDFEDEGTYECEAENIKGRDTYQGRIIIH 90
>d1cs6a1 b.1.1.4 (A:7-103) Axonin-1 {Chicken (Gallus gallus) [TaxId:
9031]}
Length = 97
Score = 56.5 bits (135), Expect = 3e-11
Identities = 18/93 (19%), Positives = 34/93 (36%), Gaps = 5/93 (5%)
Query: 133 PPVFTKKIQPCRAFE---QDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKS 189
PVF ++ E +++ +P T +W + PD +
Sbjct: 4 GPVFEEQPAHTLFPEGSAEEKVTLTCRARANPPATYRWKMNGTELKMGPDSRYR-LVAGD 62
Query: 190 ILIMRQVFMEDSGVFAVIAENRGGKAK-CSANL 221
++I V +D+G + +A N G A+L
Sbjct: 63 LVISNPVKAKDAGSYQCVATNARGTVVSREASL 95
>d2fdbp2 b.1.1.4 (P:2252-2360) Fibroblast growth factor receptor,
FGFR {Human (Homo sapiens), FGFR1 [TaxId: 9606]}
Length = 109
Score = 56.9 bits (136), Expect = 4e-11
Identities = 21/105 (20%), Positives = 32/105 (30%), Gaps = 14/105 (13%)
Query: 133 PPVFTKKI-QPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS-------------P 178
P+ + F + D P I+W + S
Sbjct: 4 RPILQAGLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPDGLPYLKVLKA 63
Query: 179 DFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223
T +L +R V ED+G + +A N G + SA L V
Sbjct: 64 AGVNTTDKEIEVLYIRNVTFEDAGEYTCLAGNSIGISFHSAWLTV 108
>d1he7a_ b.1.1.4 (A:) High affinity nerve growth factor receptor
TrkA, different domains {Human (Homo sapiens) [TaxId:
9606]}
Length = 107
Score = 55.7 bits (133), Expect = 8e-11
Identities = 13/81 (16%), Positives = 26/81 (32%), Gaps = 7/81 (8%)
Query: 153 FEVEFDGDPLPTIKWFREDFPITSSPDFQIH-------TFSTKSILIMRQVFMEDSGVFA 205
DG P P+++W + + L + Q ++G +
Sbjct: 20 IPFSVDGQPAPSLRWLFNGSVLNETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYT 79
Query: 206 VIAENRGGKAKCSANLVVEEK 226
++A N G+A S +
Sbjct: 80 LLAANPFGQASASIMAAFMDN 100
>d1tiua_ b.1.1.4 (A:) Twitchin {Human (Homo sapiens), Ig repeat 27
[TaxId: 9606]}
Length = 89
Score = 54.4 bits (130), Expect = 2e-10
Identities = 28/90 (31%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQ 195
K + F + A FE+E +P +W + P+T+SPD +I K ILI+
Sbjct: 4 VEKPLYGVEVFVGETAHFEIEL-SEPDVHGQWKLKGQPLTASPDCEIIEDGKKHILILHN 62
Query: 196 VFMEDSGVFAVIAENRGGKAKCSANLVVEE 225
+ +G + A N AK +ANL V+E
Sbjct: 63 CQLGMTGEVSFQAAN----AKSAANLKVKE 88
>d2dava1 b.1.1.4 (A:8-120) Myosin-binding protein C, slow-type
{Human (Homo sapiens) [TaxId: 9606]}
Length = 113
Score = 55.0 bits (131), Expect = 2e-10
Identities = 18/106 (16%), Positives = 34/106 (32%), Gaps = 12/106 (11%)
Query: 135 VFTKKIQPCRAFEQDQARFEVEFDGDPL---PTIKWFREDFPITSSPDFQIHTFSTK--- 188
+F +K Q + F + + L PTIKWF+ + +S +
Sbjct: 2 LFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGKWMDLASKAGKHLQLKETFER 61
Query: 189 ------SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQ 228
+ + + +G + + CS +L V E
Sbjct: 62 HSRVYTFEMQIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHESTG 107
>d1wwca_ b.1.1.4 (A:) NT3 binding domain of trkC receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 53.8 bits (128), Expect = 4e-10
Identities = 20/98 (20%), Positives = 38/98 (38%), Gaps = 7/98 (7%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSS----PDFQIHTFSTK 188
PP +P E E G+P PT+ W P+ S ++ ++
Sbjct: 5 PPRVVSLEEPELRLE---HCIEFVVRGNPPPTLHWLHNGQPLRESKIIHVEYYQEGEISE 61
Query: 189 SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 226
L+ + ++G + +IA+N G A + N ++
Sbjct: 62 GCLLFNKPTHYNNGNYTLIAKNPLGTANQTINGHFLKE 99
>d2c9aa1 b.1.1.4 (A:184-279) Receptor-type tyrosine-protein
phosphatase mu {Human (Homo sapiens) [TaxId: 9606]}
Length = 96
Score = 53.5 bits (127), Expect = 4e-10
Identities = 15/96 (15%), Positives = 28/96 (29%), Gaps = 5/96 (5%)
Query: 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFP---ITSSPDFQIHTFSTK 188
+ P F + IQ A F+ G + + + + +
Sbjct: 1 RTPHFLR-IQNVEVNAGQFATFQCSAIGRTVAGDRLWLQGIDVRDAPLKEIKVTSSRRFI 59
Query: 189 SILIMRQVFMEDSGVFAVIAENRGGKAK-CSANLVV 223
+ + D+G + + GG A LVV
Sbjct: 60 ASFNVVNTTKRDAGKYRCMIRTEGGVGISNYAELVV 95
>d1wwbx_ b.1.1.4 (X:) Ligand binding domain of trkB receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 53.1 bits (126), Expect = 7e-10
Identities = 17/99 (17%), Positives = 29/99 (29%), Gaps = 8/99 (8%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTK---- 188
P T P G+P P ++WF + S T
Sbjct: 4 APTITFLESP---TSDHHWCIPFTVKGNPKPALQWFYNGAILNESKYICTKIHVTNHTEY 60
Query: 189 -SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEK 226
L + ++G + +IA+N GK + +
Sbjct: 61 HGCLQLDNPTHMNNGDYTLIAKNEYGKDEKQISAHFMGW 99
>d1f97a2 b.1.1.4 (A:129-238) Junction adhesion molecule, JAM,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 110
Score = 53.1 bits (126), Expect = 7e-10
Identities = 21/101 (20%), Positives = 33/101 (32%), Gaps = 9/101 (8%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVE-FDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSIL 191
PP P ++A DG P WF++ + ++ + F S
Sbjct: 2 PPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYSWFKDGISMLTADAKKTRAFMNSSFT 61
Query: 192 IM--------RQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224
I V DSG + A+N G A S ++
Sbjct: 62 IDPKSGDLIFDPVTAFDSGEYYCQAQNGYGTAMRSEAAHMD 102
Score = 26.9 bits (58), Expect = 1.2
Identities = 9/36 (25%), Positives = 12/36 (33%)
Query: 235 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYW 270
VPPS T + + +G A P Y
Sbjct: 1 VPPSKPTISVPSSVTIGNRAVLTCSEHDGSPPSEYS 36
>d2ifga1 b.1.1.4 (A:192-283) High affinity nerve growth factor
receptor TrkA, different domains {Human (Homo sapiens)
[TaxId: 9606]}
Length = 92
Score = 52.1 bits (123), Expect = 1e-09
Identities = 12/91 (13%), Positives = 27/91 (29%), Gaps = 1/91 (1%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 192
P ++ D + +G L W + + + + + + +
Sbjct: 2 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWILTELEQS-ATVMKSGGLPSLGLTL 60
Query: 193 MRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223
+ AEN G+A+ S + V
Sbjct: 61 ANVTSDLNRKNVTCWAENDVGRAEVSVQVNV 91
Score = 25.1 bits (53), Expect = 4.0
Identities = 5/37 (13%), Positives = 13/37 (35%)
Query: 236 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYWLK 272
P+ + +A ++VG ++ W+
Sbjct: 2 VPTLKVQVPNASVDVGDDVLLRCQVEGRGLEQAGWIL 38
>d1iray1 b.1.1.4 (Y:1-101) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 101
Score = 51.5 bits (122), Expect = 3e-09
Identities = 13/72 (18%), Positives = 23/72 (31%)
Query: 158 DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC 217
+ TI W+++D S + K L +EDSG + + N +
Sbjct: 28 PNEHKGTITWYKDDSKTPVSTEQASRIHQHKEKLWFVPAKVEDSGHYYCVVRNSSYCLRI 87
Query: 218 SANLVVEEKRQG 229
+ E
Sbjct: 88 KISAKFVENEPN 99
>d3b5ha1 b.1.1.4 (A:103-203) Cervical EMMPRIN {Human (Homo sapiens)
[TaxId: 9606]}
Length = 101
Score = 51.2 bits (121), Expect = 3e-09
Identities = 16/99 (16%), Positives = 28/99 (28%), Gaps = 8/99 (8%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTI-------KWFREDFPITSSPDFQIHTF 185
PP E + A + + P T + S F + +
Sbjct: 2 PPRVKAVKSSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMNGSESRFFVSSS 61
Query: 186 STKSILIMRQVFMED-SGVFAVIAENRGGKAKCSANLVV 223
+S L + + ME G + + G + L V
Sbjct: 62 QGRSELHIENLNMEADPGQYRCNGTSSKGSDQAIITLRV 100
>d1epfa2 b.1.1.4 (A:98-189) Neural cell adhesion molecule (NCAM)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 92
Score = 49.5 bits (117), Expect = 9e-09
Identities = 14/90 (15%), Positives = 25/90 (27%), Gaps = 1/90 (1%)
Query: 134 PVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIM 193
+F P E + A + PTI W + + D + S + I
Sbjct: 2 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKGRDVILKKDVRFIVLSNNYLQIR 61
Query: 194 RQVFMEDSGVFAVIAENRGGKAKCSANLVV 223
+ D G + ++ V
Sbjct: 62 G-IKKTDEGTYRCEGRILARGEINFKDIQV 90
Score = 24.5 bits (52), Expect = 7.8
Identities = 5/36 (13%), Positives = 11/36 (30%)
Query: 237 PSFLTTISSAVINVGQLARFDAKISATKPLDVYWLK 272
F + G+ A + ++ P + W
Sbjct: 2 LMFKNAPTPQEFKEGEDAVIVCDVVSSLPPTIIWKH 37
>d1nbqa2 b.1.1.4 (A:130-233) Junction adhesion molecule, JAM,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 49.6 bits (117), Expect = 1e-08
Identities = 20/100 (20%), Positives = 36/100 (36%), Gaps = 8/100 (8%)
Query: 133 PPVFTKKIQPCRAFEQDQARFE-VEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTK--- 188
PP P A ++A E DG P WF++ + ++P ++
Sbjct: 2 PPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTWFKDGIVMPTNPKSTRAFSNSSYVL 61
Query: 189 ----SILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224
L+ + D+G ++ A N G S + +E
Sbjct: 62 NPTTGELVFDPLSASDTGEYSCEARNGYGTPMTSNAVRME 101
Score = 26.9 bits (58), Expect = 1.3
Identities = 9/37 (24%), Positives = 11/37 (29%)
Query: 235 VPPSFLTTISSAVINVGQLARFDAKISATKPLDVYWL 271
VPPS T + +G A P Y
Sbjct: 1 VPPSKPTVNIPSSATIGNRAVLTCSEQDGSPPSEYTW 37
>d1biha1 b.1.1.4 (A:5-98) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 94
Score = 49.7 bits (117), Expect = 1e-08
Identities = 14/93 (15%), Positives = 28/93 (30%)
Query: 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSIL 191
K PV + E + E +G+ +++D + + + L
Sbjct: 1 KYPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYSWKKDGKSYNWQEHNAALRKDEGSL 60
Query: 192 IMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224
+ + D G + AE G A +
Sbjct: 61 VFLRPQASDEGHYQCFAETPAGVASSRVISFRK 93
Score = 25.0 bits (53), Expect = 5.5
Identities = 3/35 (8%), Positives = 6/35 (17%)
Query: 236 PPSFLTTISSAVINVGQLARFDAKISATKPLDVYW 270
P + + + I Y
Sbjct: 2 YPVLKDQPAEVLFRENNPTVLECIIEGNDQGVKYS 36
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different
domains {Human (Homo sapiens) [TaxId: 9606]}
Length = 130
Score = 50.5 bits (119), Expect = 1e-08
Identities = 22/127 (17%), Positives = 40/127 (31%), Gaps = 34/127 (26%)
Query: 133 PPVFT-----KKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPD-------- 179
PP + ++ R +V GDP PT+ W + +P
Sbjct: 4 PPKIHLDCPGRIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPE 63
Query: 180 ---------------------FQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKCS 218
++ T +SI + ED GV+ V +N G+ + +
Sbjct: 64 DTGDSDEWVFDKKLLCETEGRVRVETTKDRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVN 123
Query: 219 ANLVVEE 225
+ V +
Sbjct: 124 LTVKVID 130
>d1gl4b_ b.1.1.4 (B:) Perlecan Ig3 domain {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 89
Score = 49.2 bits (116), Expect = 1e-08
Identities = 17/93 (18%), Positives = 28/93 (30%), Gaps = 6/93 (6%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVE-FDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSIL 191
V ++ + F P T+ W R S + IL
Sbjct: 2 IMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKLPSRAMDFN-----GIL 56
Query: 192 IMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224
+R V D+G + N + +A L V+
Sbjct: 57 TIRNVQPSDAGTYVCTGSNMFAMDQGTATLHVQ 89
>d1iray3 b.1.1.4 (Y:205-311) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 107
Score = 46.7 bits (109), Expect = 2e-07
Identities = 11/105 (10%), Positives = 25/105 (23%), Gaps = 13/105 (12%)
Query: 132 KPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTK--- 188
+P + + + Q + G W I + +
Sbjct: 1 RPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWNGSVIDEDDPVLGEDYYSVENP 60
Query: 189 ---------SILIMRQVFMEDSGV-FAVIAENRGGKAKCSANLVV 223
++L + ++ F A+N G L+
Sbjct: 61 ANKRRSTLITVLNISEIESRFYKHPFTCFAKNTHGIDAAYIQLIY 105
>d2aw2a1 b.1.1.1 (A:34-137) B- and T-lymphocyte attenuator CD272
{Human (Homo sapiens) [TaxId: 9606]}
Length = 104
Score = 46.2 bits (108), Expect = 2e-07
Identities = 14/100 (14%), Positives = 30/100 (30%), Gaps = 7/100 (7%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDP-LPTIKWFREDFPITSSPDFQIHTFSTK--- 188
++ K+ D E P + W + + + + ++ +
Sbjct: 3 VQLYIKRQSEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKLEDRQTSWKEEKNI 62
Query: 189 --SILIMRQVFMEDSGVFAVIAENRGGKAKC-SANLVVEE 225
IL V D+G + A + + S L V +
Sbjct: 63 SFFILHFEPVLPNDNGSYRCSANFQSNLIESHSTTLYVTD 102
>d2crya1 b.1.1.1 (A:8-122) Kin of IRRE-like protein 3, KIRREL3
{Human (Homo sapiens) [TaxId: 9606]}
Length = 115
Score = 46.2 bits (108), Expect = 2e-07
Identities = 16/114 (14%), Positives = 32/114 (28%), Gaps = 14/114 (12%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWF-REDFPITSSPDFQIH------TF 185
PP+ + Q A ++ + + P P + ++ + S +
Sbjct: 7 PPIISS-TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKENVLESGTSGRYTVETISTEE 65
Query: 186 STKSILIMRQVFME-DSGVFAVIAENRGGKAKCSANLVVEEKRQGGRGGVVPPS 238
S L + + ++ A N G L + G P S
Sbjct: 66 GVISTLTISNIVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSEMSG-----PSS 114
>d1rhfa1 b.1.1.1 (A:7-97) Tyrosine-protein kinase receptor tyro3,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 45.7 bits (107), Expect = 2e-07
Identities = 14/81 (17%), Positives = 27/81 (33%), Gaps = 3/81 (3%)
Query: 147 EQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQI--HTFSTKSILIMRQVFMEDSGVF 204
+ + +G P I+W ++ + + I L ++ V D+G +
Sbjct: 10 QGQPVKLNCSVEGMEEPDIQWVKDGAVVQNLDQLYIPVSEQHWIGFLSLKSVERSDAGRY 69
Query: 205 AVIAENRGGKAK-CSANLVVE 224
E+ G L VE
Sbjct: 70 WCQVEDGGETEISQPVWLTVE 90
>d2oz4a3 b.1.1.4 (A:367-450) Intercellular adhesion molecule-1,
ICAM-1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 84
Score = 43.8 bits (102), Expect = 9e-07
Identities = 13/95 (13%), Positives = 26/95 (27%), Gaps = 15/95 (15%)
Query: 133 PPVFTKKIQP--CRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 190
P ++ P E Q + G+PLP +K ++ +
Sbjct: 2 GPRLDERDCPGNWTWPENSQQTPMCQAWGNPLPELKCLKDGTFPLPIGESVTV------- 54
Query: 191 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225
+ G + A + G+ + V
Sbjct: 55 ------TRDLEGTYLCRARSTQGEVTREVTVNVLS 83
>d1biha3 b.1.1.4 (A:210-306) Hemolin {Moth (Hyalophora cecropia)
[TaxId: 7123]}
Length = 97
Score = 44.1 bits (103), Expect = 1e-06
Identities = 20/98 (20%), Positives = 34/98 (34%), Gaps = 5/98 (5%)
Query: 129 KPAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFR--EDFPITSSPDFQIHTFS 186
K P + K A D + +P+ +F+ +D H +
Sbjct: 1 KGEPVPQYVSK--DMMAKAGDVTMIYCMYGSNPMGYPNYFKNGKDVNGNPEDRITRHNRT 58
Query: 187 TKSILIMRQVFMEDSGVFAVIAENRGGKAKC-SANLVV 223
+ L+ + ED GV+ +N GK + S L V
Sbjct: 59 SGKRLLFKTTLPEDEGVYTCEVDNGVGKPQKHSLKLTV 96
>d1gsma1 b.1.1.4 (A:1-90) Mucosal addressin cell adhesion molecule-1
(MADCAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 41.6 bits (96), Expect = 7e-06
Identities = 12/93 (12%), Positives = 28/93 (30%), Gaps = 6/93 (6%)
Query: 132 KPPVFTKKIQPCRAFEQDQARFEVEFD-GDPLPTIKWFREDFPITSSPDFQIHTFSTKSI 190
KP + D +++W D + + + +S+
Sbjct: 2 KPLQVEPPEPVVAVALGASRQLTCRLACADRGASVQWRGLDTS-----LGAVQSDTGRSV 56
Query: 191 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVV 223
L +R + +G + G + + L+V
Sbjct: 57 LTVRNASLSAAGTRVCVGSCGGRTFQHTVQLLV 89
>d1rhfa2 b.1.1.4 (A:98-182) Tyrosine-protein kinase receptor tyro3,
second domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 85
Score = 40.3 bits (93), Expect = 1e-05
Identities = 17/92 (18%), Positives = 27/92 (29%), Gaps = 11/92 (11%)
Query: 134 PVFTKKIQPCRAFEQDQARFEVEF-DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILI 192
P FT + + + E TI W+R I T
Sbjct: 2 PFFTVEPKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGTTKIGGPAPSPSVLNVTG---- 57
Query: 193 MRQVFMEDSGVFAVIAENRGGKAK-CSANLVV 223
+ S +F+ A N G A +A + +
Sbjct: 58 -----VTQSTMFSCEAHNLKGLASSRTATVHL 84
>d1iray2 b.1.1.4 (Y:102-204) Type-1 interleukin-1 receptor {Human
(Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 40.2 bits (93), Expect = 3e-05
Identities = 14/67 (20%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 158 DGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIAENRGGKAKC 217
+ + LP ++W+++ P+ IH K LI+ V + G + A +
Sbjct: 30 ENNELPKLQWYKDCKPL---LLDNIHFSGVKDRLIVMNVAEKHRGNYTCHASYTYLGKQY 86
Query: 218 SANLVVE 224
V+E
Sbjct: 87 PITRVIE 93
>d1iama1 b.1.1.3 (A:83-185) Intercellular cell adhesion molecule-1
(ICAM-1) {Human (Homo sapiens) [TaxId: 9606]}
Length = 103
Score = 39.1 bits (90), Expect = 6e-05
Identities = 9/99 (9%), Positives = 17/99 (17%), Gaps = 6/99 (6%)
Query: 133 PPVFTKKIQPCRAFEQDQARFEVEFDG---DPLPTIKWFREDFPITSSPDFQIHTFSTKS 189
P P Q + +G T+ R + + +
Sbjct: 4 PERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLRGEKELKRE---PAVGEPAEV 60
Query: 190 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEEKRQ 228
+ F+ E Q
Sbjct: 61 TTTVLVRRDHHGAQFSCRTELDLRPQGLELFENTSAPYQ 99
Score = 27.1 bits (59), Expect = 0.93
Identities = 7/41 (17%), Positives = 12/41 (29%), Gaps = 3/41 (7%)
Query: 235 VPPSFLTTISSAVINVGQLARFDAKISATKP---LDVYWLK 272
P + VG+ ++ P L V L+
Sbjct: 3 TPERVELAPLPSWQPVGKQLTLRCQVEGGAPRAQLTVVLLR 43
>d1n26a1 b.1.1.4 (A:1-93) Interleukin-6 receptor alpha chain,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 38.0 bits (87), Expect = 2e-04
Identities = 13/95 (13%), Positives = 25/95 (26%), Gaps = 5/95 (5%)
Query: 130 PAKPPVFTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKS 189
P + P + D + P
Sbjct: 3 PRRCPAQEVARGVLTSLPGDSVTLTCPGVEPEDNATVHWVLRKPAA--GSHPSRWAGMGR 60
Query: 190 ILIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVE 224
L++R V + DSG ++ R + +L+V+
Sbjct: 61 RLLLRSVQLHDSGNYSCYRAGRPA---GTVHLLVD 92
>d1vcaa2 b.1.1.4 (A:1-90) Vascular cell adhesion molecule-1 (VCAM-1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 90
Score = 35.1 bits (79), Expect = 0.001
Identities = 12/75 (16%), Positives = 19/75 (25%), Gaps = 3/75 (4%)
Query: 149 DQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVFAVIA 208
D G P W + + T ST L M V + + A
Sbjct: 17 DSVSLTCSTTGCESPFFSWRTQIDSPLNGKVTNEGTTST---LTMNPVSFGNEHSYLCTA 73
Query: 209 ENRGGKAKCSANLVV 223
K + + +
Sbjct: 74 TCESRKLEKGIQVEI 88
>d1nbqa1 b.1.1.1 (A:25-129) Junction adhesion molecule, JAM,
N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 105
Score = 34.4 bits (77), Expect = 0.003
Identities = 11/88 (12%), Positives = 29/88 (32%), Gaps = 8/88 (9%)
Query: 144 RAFEQDQARFEVEFDGDPLPTIKWFREDFP--------ITSSPDFQIHTFSTKSILIMRQ 195
R E + + + G P ++W + + ++ + + +
Sbjct: 15 RIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFLPTGITFKS 74
Query: 196 VFMEDSGVFAVIAENRGGKAKCSANLVV 223
V ED+G + + GG + + +
Sbjct: 75 VTREDTGTYTCMVSEEGGNSYGEVKVKL 102
>d1ccza1 b.1.1.1 (A:1-93) CD2-binding domain of CD58, N-terminal
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 93
Score = 32.6 bits (73), Expect = 0.011
Identities = 13/97 (13%), Positives = 29/97 (29%), Gaps = 14/97 (14%)
Query: 136 FTKKIQPCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFS--------- 186
F+++I F V PL + W ++ + + + FS
Sbjct: 1 FSQQIY---GVVYGNVTFHVPS-NVPLKEVLWKKQKDKVAELENSEFRAFSSFKNRVYLD 56
Query: 187 -TKSILIMRQVFMEDSGVFAVIAENRGGKAKCSANLV 222
L + + D + + + N K ++
Sbjct: 57 TVSGSLTIYNLTSSDEDEYEMESPNITDTMKFFLYVL 93
>d2fcba2 b.1.1.4 (A:91-178) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), IIb [TaxId: 9606]}
Length = 88
Score = 32.6 bits (73), Expect = 0.011
Identities = 10/83 (12%), Positives = 18/83 (21%), Gaps = 10/83 (12%)
Query: 145 AFEQDQARFEVEFDGD-PLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGV 203
E + D PL + +F+ S + Q SG
Sbjct: 12 FQEGETIVLRCHSWKDKPLVKVTFFQNGKSKKFSRSDPNFSIP--------QANHSHSGD 63
Query: 204 FAVIAENRGGKAK-CSANLVVEE 225
+ + V+
Sbjct: 64 YHCTGNIGYTLYSSKPVTITVQA 86
>d1pkoa_ b.1.1.1 (A:) Myelin oligodendrocyte glycoprotein (MOG) {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 126
Score = 33.1 bits (74), Expect = 0.011
Identities = 7/35 (20%), Positives = 15/35 (42%)
Query: 191 LIMRQVFMEDSGVFAVIAENRGGKAKCSANLVVEE 225
L ++ V D G + + + + + L VE+
Sbjct: 83 LRIQNVRFSDEGGYTCFFRDHSYQEEAAVELKVED 117
>d1hnga1 b.1.1.1 (A:2-99) CD2, first domain {Rat (Rattus norvegicus)
[TaxId: 10116]}
Length = 98
Score = 30.4 bits (68), Expect = 0.073
Identities = 15/82 (18%), Positives = 31/82 (37%), Gaps = 3/82 (3%)
Query: 142 PCRAFEQDQARFEVEFDGDPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDS 201
F+ EV ++ ++ R+ P S F+I + + I + + +DS
Sbjct: 16 NIPNFQMTDDIDEVRWERGSTLVAEFKRKMKPFLKSGAFEIL--ANGDLKI-KNLTRDDS 72
Query: 202 GVFAVIAENRGGKAKCSANLVV 223
G + V + G + L +
Sbjct: 73 GTYNVTVYSTNGTRILNKALDL 94
>d1fnla2 b.1.1.4 (A:87-175) Fc gamma receptor ectodomain (CD32)
{Human (Homo sapiens), III [TaxId: 9606]}
Length = 89
Score = 29.9 bits (66), Expect = 0.078
Identities = 7/82 (8%), Positives = 21/82 (25%), Gaps = 10/82 (12%)
Query: 146 FEQDQARFEVEFDGD-PLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMEDSGVF 204
E+D + L + + + + ++DSG +
Sbjct: 15 KEEDPIHLRCHSWKNTALHKVTYLQNGKDRKYFHHNSDFHIP--------KATLKDSGSY 66
Query: 205 AVIAEN-RGGKAKCSANLVVEE 225
+ + N+ + +
Sbjct: 67 FCRGLVGSKNVSSETVNITITQ 88
>d1q5da_ a.104.1.1 (A:) Cytochrome P450epok {Sorangium cellulosum
[TaxId: 56]}
Length = 401
Score = 27.5 bits (59), Expect = 2.1
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 153 FEVEFDGDPLPTIKWFREDFPITSSPD 179
F + DP P I+ RE PI +
Sbjct: 5 FAPGYAEDPFPAIERLREATPIFYWDE 31
>d1zxqa1 b.1.1.3 (A:87-192) Intercellular cell adhesion molecule-2
(ICAM-2) {Human (Homo sapiens) [TaxId: 9606]}
Length = 106
Score = 25.7 bits (55), Expect = 2.8
Identities = 7/41 (17%), Positives = 19/41 (46%), Gaps = 4/41 (9%)
Query: 236 PPSFLT-TISSAVINVGQLARFDAKISATKP---LDVYWLK 272
PP + T+ ++ VG+ + ++ +P L ++ +
Sbjct: 1 PPRQVILTLQPTLVAVGKSFTIECRVPTVEPLDSLTLFLFR 41
>d2axtd1 f.26.1.1 (D:13-352) Photosystem II reaction center d2
protein PsbD2 {Thermosynechococcus elongatus [TaxId:
146786]}
Length = 340
Score = 26.7 bits (59), Expect = 3.7
Identities = 7/28 (25%), Positives = 14/28 (50%)
Query: 167 WFREDFPITSSPDFQIHTFSTKSILIMR 194
+ I ++ D + TF TK++L+
Sbjct: 284 YDFISQEIRAAEDPEFETFYTKNLLLNE 311
>d1hfua2 b.6.1.3 (A:132-303) Laccase {Inky cap fungus (Coprinus
cinereus) [TaxId: 5346]}
Length = 172
Score = 25.8 bits (56), Expect = 4.9
Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 242 TISSAVINVGQLARFDAKISATKPLDVYWLKVSS 275
T+ I GQ R+ + A +P+D YW++
Sbjct: 100 TVDRLQIFTGQ--RYSFVLDANQPVDNYWIRAQP 131
>d1crba_ b.60.1.2 (A:) Cellular retinol-binding protein II (CRBP)
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 134
Score = 25.2 bits (55), Expect = 6.5
Identities = 17/67 (25%), Positives = 24/67 (35%), Gaps = 10/67 (14%)
Query: 35 EETKIIDGRKVSVPEPSASGVHGKEIHTAKSQQVQKEKKGDKEIVRKITATE-TTEMEHK 93
E+ ID RK K Q VQK +K + + I E EM +
Sbjct: 72 EDLTGIDDRKCMTTVSWDGD---------KLQCVQKGEKEGRGWTQWIEGDELHLEMRAE 122
Query: 94 GKIQERV 100
G ++V
Sbjct: 123 GVTCKQV 129
>d1yg2a_ a.4.5.61 (A:) Hypothetical protein AphA {Vibrio cholerae
[TaxId: 666]}
Length = 178
Score = 25.4 bits (55), Expect = 6.6
Identities = 14/79 (17%), Positives = 28/79 (35%), Gaps = 4/79 (5%)
Query: 56 HGKEIHTAKSQQVQKEKKGDKEIVRKITATETTEMEHKGKIQERVVDASELDDDGYYAIT 115
G +I +++ + + E +M +G + + D Y+IT
Sbjct: 16 TGYDI----TKEFSASIGYFWKASHQQVYRELNKMGEQGLVTCVLEPQEGKPDRKVYSIT 71
Query: 116 ERKYYALSDLSEQKPAKPP 134
+ AL + +Q A P
Sbjct: 72 QAGRSALGEWFDQPTAHPT 90
>d1xiwa_ b.1.1.4 (A:) CD3 epsilon chain ectodomain fragment {Human
(Homo sapiens) [TaxId: 9606]}
Length = 91
Score = 24.2 bits (52), Expect = 8.3
Identities = 12/76 (15%), Positives = 20/76 (26%), Gaps = 9/76 (11%)
Query: 150 QARFEVEFDG---------DPLPTIKWFREDFPITSSPDFQIHTFSTKSILIMRQVFMED 200
Q ++V G P I W D I D + + + +E
Sbjct: 1 QTPYKVSISGTTVILTCPQYPGSEILWQHNDKNIGGDEDDKNIGSDEDHLSLKEFSELEQ 60
Query: 201 SGVFAVIAENRGGKAK 216
SG + +
Sbjct: 61 SGYYVCYPRGSKPEDA 76
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.313 0.130 0.366
Gapped
Lambda K H
0.267 0.0491 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,002,066
Number of extensions: 46084
Number of successful extensions: 175
Number of sequences better than 10.0: 1
Number of HSP's gapped: 150
Number of HSP's successfully gapped: 70
Length of query: 283
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 199
Effective length of database: 1,254,276
Effective search space: 249600924
Effective search space used: 249600924
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 52 (24.4 bits)