Your job contains 1 sequence.
>psy14063
MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV
NMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWS
VFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVP
AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSE
NRVSGILGRLGDLGGIDQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI
PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIG
YSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQD
LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV
KEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSPK
The BLAST search returned 5 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14063
(531 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|F1MAD9 - symbol:Smc4 "Structural maintenance of... 528 2.5e-62 2
MGI|MGI:1917349 - symbol:Smc4 "structural maintenance of ... 512 1.4e-61 2
ZFIN|ZDB-GENE-020419-21 - symbol:smc4 "structural mainten... 501 2.0e-59 2
UNIPROTKB|F1NDN4 - symbol:SMC4 "Structural maintenance of... 479 1.6e-55 2
UNIPROTKB|F1P3C6 - symbol:SMC4 "Structural maintenance of... 479 1.7e-55 2
FB|FBgn0015391 - symbol:glu "gluon" species:7227 "Drosoph... 558 6.7e-54 2
UNIPROTKB|Q9ERA5 - symbol:SMC4 "Structural maintenance of... 534 1.6e-52 2
UNIPROTKB|E9PD53 - symbol:SMC4 "Structural maintenance of... 529 2.3e-52 2
UNIPROTKB|Q9NTJ3 - symbol:SMC4 "Structural maintenance of... 529 2.5e-52 2
UNIPROTKB|F1SH51 - symbol:SMC4 "Structural maintenance of... 524 4.1e-52 2
UNIPROTKB|E2RCX4 - symbol:SMC4 "Structural maintenance of... 534 1.7e-51 2
UNIPROTKB|E1BMZ9 - symbol:SMC4 "Structural maintenance of... 516 7.8e-51 2
UNIPROTKB|P50532 - symbol:smc4 "Structural maintenance of... 525 3.0e-49 1
SGD|S000004076 - symbol:SMC4 "Subunit of the condensin co... 339 1.5e-39 2
ASPGD|ASPL0000075987 - symbol:AN4597 species:162425 "Emer... 418 1.0e-37 1
POMBASE|SPBC146.03c - symbol:cut3 "condensin complex subu... 341 1.6e-29 2
DICTYBASE|DDB_G0286403 - symbol:smc4 "structural maintena... 351 5.6e-29 1
CGD|CAL0003745 - symbol:SMC4 species:5476 "Candida albica... 301 2.9e-23 1
WB|WBGene00004874 - symbol:smc-4 species:6239 "Caenorhabd... 239 2.1e-20 2
UNIPROTKB|Q20060 - symbol:smc-4 "Structural maintenance o... 239 2.1e-20 2
POMBASE|SPBP4H10.06c - symbol:cut14 "condensin complex su... 163 2.1e-13 2
ZFIN|ZDB-GENE-030131-105 - symbol:smc2 "structural mainte... 151 1.5e-12 2
WB|WBGene00001086 - symbol:dpy-27 species:6239 "Caenorhab... 158 4.1e-12 2
UNIPROTKB|P48996 - symbol:dpy-27 "Chromosome condensation... 158 4.1e-12 2
UNIPROTKB|O93308 - symbol:smc1a "Structural maintenance o... 190 5.2e-11 2
UNIPROTKB|G3X7C0 - symbol:SMC1A "Structural maintenance o... 198 9.6e-11 2
UNIPROTKB|O97593 - symbol:SMC1A "Structural maintenance o... 198 9.6e-11 2
UNIPROTKB|E2QV07 - symbol:SMC1A "Structural maintenance o... 198 9.6e-11 2
UNIPROTKB|Q14683 - symbol:SMC1A "Structural maintenance o... 198 9.6e-11 2
UNIPROTKB|F2Z5A8 - symbol:LOC100523938 "Structural mainte... 198 9.6e-11 2
MGI|MGI:1344345 - symbol:Smc1a "structural maintenance of... 198 9.6e-11 2
UNIPROTKB|I3LMC6 - symbol:LOC100523938 "Structural mainte... 198 9.7e-11 2
RGD|61991 - symbol:Smc1a "structural maintenance of chrom... 197 1.2e-10 2
UNIPROTKB|Q9Z1M9 - symbol:Smc1a "Structural maintenance o... 197 1.2e-10 2
ZFIN|ZDB-GENE-090506-9 - symbol:smc1a "structural mainten... 188 1.8e-10 2
UNIPROTKB|F1NN18 - symbol:SMC4 "Uncharacterized protein" ... 174 8.5e-10 1
UNIPROTKB|P51834 - symbol:smc "Chromosome partition prote... 184 8.9e-10 2
GENEDB_PFALCIPARUM|MAL13P1.96 - symbol:MAL13P1.96 "chromo... 128 1.8e-09 2
UNIPROTKB|Q8IED2 - symbol:MAL13P1.96 "Structural maintena... 128 1.8e-09 2
UNIPROTKB|F1SP73 - symbol:F1SP73 "Uncharacterized protein... 137 2.1e-09 2
ASPGD|ASPL0000004872 - symbol:smcB species:162425 "Emeric... 168 2.8e-09 2
UNIPROTKB|Q71YL3 - symbol:smC "Chromosome partition prote... 138 3.1e-09 2
TIGR_CMR|BA_3986 - symbol:BA_3986 "chromosome segregation... 164 3.8e-09 2
ZFIN|ZDB-GENE-040426-57 - symbol:smc1al "structural maint... 181 4.2e-09 2
CGD|CAL0000340 - symbol:SMC2 species:5476 "Candida albica... 169 7.4e-09 1
FB|FBgn0040283 - symbol:SMC1 "SMC1" species:7227 "Drosoph... 171 7.8e-09 2
UNIPROTKB|C9JR83 - symbol:SMC4 "Structural maintenance of... 162 9.1e-09 1
RGD|1306680 - symbol:Smc4 "structural maintenance of chro... 162 9.6e-09 1
TAIR|locus:2167973 - symbol:SMC2 "AT5G62410" species:3702... 133 1.3e-08 2
UNIPROTKB|G8JLG1 - symbol:SMC1A "Structural maintenance o... 162 1.3e-08 1
UNIPROTKB|F6V533 - symbol:SMC1B "Uncharacterized protein"... 128 1.8e-08 2
UNIPROTKB|E2QRT5 - symbol:SMC1B "Structural maintenance o... 128 2.5e-08 2
UNIPROTKB|Q8NDV3 - symbol:SMC1B "Structural maintenance o... 132 3.1e-08 2
MGI|MGI:2154049 - symbol:Smc1b "structural maintenance of... 128 4.1e-08 2
SGD|S000001886 - symbol:SMC1 "Subunit of the multiprotein... 140 8.6e-08 3
RGD|1308791 - symbol:Smc1b "structural maintenance of chr... 125 1.1e-07 2
UNIPROTKB|F1SJW1 - symbol:F1SJW1 "Uncharacterized protein... 125 1.2e-07 2
SGD|S000001927 - symbol:SMC2 "Subunit of the condensin co... 154 1.8e-07 2
UNIPROTKB|I3LK17 - symbol:CCDC88A "Uncharacterized protei... 141 2.5e-07 2
UNIPROTKB|F1SQK4 - symbol:CCDC88A "Uncharacterized protei... 141 2.7e-07 2
UNIPROTKB|G3MXG3 - symbol:CCDC88A "Uncharacterized protei... 140 3.4e-07 2
UNIPROTKB|F1MAY4 - symbol:CCDC88A "Uncharacterized protei... 140 3.7e-07 2
UNIPROTKB|Q3V6T2 - symbol:CCDC88A "Girdin" species:9606 "... 138 6.1e-07 2
UNIPROTKB|E2R498 - symbol:CCDC88A "Uncharacterized protei... 138 6.1e-07 2
POMBASE|SPAC10F6.09c - symbol:psm3 "mitotic cohesin compl... 155 7.7e-07 2
UNIPROTKB|F1MY41 - symbol:SMC2 "Structural maintenance of... 146 1.4e-06 2
ZFIN|ZDB-GENE-070822-12 - symbol:smyhc2 "slow myosin heav... 148 1.5e-06 2
ASPGD|ASPL0000036762 - symbol:AN2963 species:162425 "Emer... 133 1.8e-06 2
UNIPROTKB|Q9X0R4 - symbol:smc "Chromosome partition prote... 147 1.8e-06 1
MGI|MGI:1925177 - symbol:Ccdc88a "coiled coil domain cont... 133 2.6e-06 2
DICTYBASE|DDB_G0272368 - symbol:ndm "macropinocytosis sup... 146 2.6e-06 2
UNIPROTKB|Q90988 - symbol:SMC2 "Structural maintenance of... 145 3.5e-06 2
SGD|S000005194 - symbol:RAD50 "Subunit of MRX complex wit... 129 4.1e-06 2
UNIPROTKB|E2R7R8 - symbol:SMC2 "Structural maintenance of... 139 4.7e-06 2
UNIPROTKB|O95347 - symbol:SMC2 "Structural maintenance of... 139 4.8e-06 2
ASPGD|ASPL0000008486 - symbol:sudA species:162425 "Emeric... 140 4.9e-06 2
WB|WBGene00001860 - symbol:him-1 species:6239 "Caenorhabd... 147 6.3e-06 2
FB|FBgn0015615 - symbol:Cap "Chromosome-associated protei... 110 6.8e-06 2
UNIPROTKB|G4N0Y1 - symbol:MGG_09571 "Uncharacterized prot... 138 7.0e-06 2
CGD|CAL0004031 - symbol:SMC3 species:5476 "Candida albica... 128 7.4e-06 2
ZFIN|ZDB-GENE-030616-162 - symbol:myh10 "myosin, heavy ch... 146 8.6e-06 2
ZFIN|ZDB-GENE-050531-1 - symbol:myh11a "myosin, heavy pol... 143 9.0e-06 1
ZFIN|ZDB-GENE-110401-4 - symbol:si:ch211-24n20.3 "si:ch21... 141 1.1e-05 2
ZFIN|ZDB-GENE-041111-270 - symbol:eea1 "early endosome an... 135 1.1e-05 2
WB|WBGene00012437 - symbol:hum-9 species:6239 "Caenorhabd... 117 1.2e-05 2
DICTYBASE|DDB_G0291752 - symbol:smc1 "structural maintena... 146 1.2e-05 2
CGD|CAL0005917 - symbol:orf19.6893 species:5476 "Candida ... 134 1.3e-05 1
UNIPROTKB|F1SIT4 - symbol:UACA "Uncharacterized protein" ... 140 1.3e-05 1
UNIPROTKB|F1SRP0 - symbol:SMC2 "Structural maintenance of... 147 1.4e-05 2
UNIPROTKB|G3N251 - symbol:CENPE "Uncharacterized protein"... 143 1.4e-05 2
UNIPROTKB|E1B7E3 - symbol:GOLGA4 "Uncharacterized protein... 134 1.5e-05 2
UNIPROTKB|F1NWN3 - symbol:MYH11 "Myosin-11" species:9031 ... 153 1.6e-05 2
UNIPROTKB|G1K307 - symbol:MYH11 "Myosin-11" species:9031 ... 153 1.6e-05 2
UNIPROTKB|E1BXA5 - symbol:MYH11 "Myosin-11" species:9031 ... 153 1.6e-05 2
UNIPROTKB|P10587 - symbol:MYH11 "Myosin-11" species:9031 ... 153 1.6e-05 2
ZFIN|ZDB-GENE-061027-393 - symbol:vmhcl "ventricular myos... 147 1.6e-05 2
TAIR|locus:2045159 - symbol:TTN7 "AT2G27170" species:3702... 105 1.7e-05 3
UNIPROTKB|E1BG49 - symbol:CENPE "Uncharacterized protein"... 143 1.7e-05 2
UNIPROTKB|F1RRC2 - symbol:GOLGA4 "Uncharacterized protein... 134 2.0e-05 2
UNIPROTKB|I3LUS9 - symbol:GOLGA4 "Uncharacterized protein... 134 2.0e-05 2
WARNING: Descriptions of 196 database sequences were not reported due to the
limiting value of parameter V = 100.
>UNIPROTKB|F1MAD9 [details] [associations]
symbol:Smc4 "Structural maintenance of chromosomes protein"
species:10116 "Rattus norvegicus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:1306680 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 IPI:IPI00372213 RefSeq:NP_001032262.2 UniGene:Rn.163695
Ensembl:ENSRNOT00000013931 GeneID:295107 KEGG:rno:295107
NextBio:638993 Uniprot:F1MAD9
Length = 1286
Score = 528 (190.9 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 127/380 (33%), Positives = 217/380 (57%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY-VNMKN 64
K+ E+ EK T++ L D++ E +L+ A + + LE +Q+ ++ + + KN
Sbjct: 379 KFIEQNKEKFTQLDL--EDVQVRE-KLKHATSKAKKLEKQLQKDKEKVEELKSIPAKSKN 435
Query: 65 -LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E T+ +E+E + +K+ D ++ L+ EK+ +E ++G F SV
Sbjct: 436 VINETTTRNNSLEKEREKEEKKLKEVMDSLKQETQGLQK-EKEIQEKELMG--FNKSVNE 492
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
A+++ E +A+SEL+I+LS + +L+ + L TL ERK +++ T++P +
Sbjct: 493 ARSKME--VAQSELDIYLSRHNTAVSQLSKAKDALITASETLKERKAAIKDINTKLPQAQ 550
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E+ E L LT+EE L V L ++V E + S+ T+RS +++D ++Q K R+
Sbjct: 551 QELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAKSSLATNRSRGKVLDAIIQEKKSGRI 610
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLD 303
+KYDIA+S+ C AL+YIV ++++ + + +K+ N+G I LD
Sbjct: 611 PGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKKHNIGVATFIGLD 670
Query: 304 KMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSG 363
KM + +Q +K +TPEN PRL DL++V++E+IR AFYFA R+TLVA +L+QA R+ Y
Sbjct: 671 KMAVW-AQKMNKIQTPENTPRLFDLVKVKNEEIRQAFYFALRDTLVANNLDQATRVAYQR 729
Query: 364 GG-YRMVTLEGAIIEPSETL 382
+R+VTL+G IIE S T+
Sbjct: 730 DRRWRVVTLQGQIIEQSGTM 749
Score = 196 (74.1 bits), Expect = 3.2e-22, Sum P(2) = 3.2e-22
Identities = 66/225 (29%), Positives = 115/225 (51%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E R EKL RV++VE + ALE E A+ FL LEN + +K N I QY Y + E
Sbjct: 276 NEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFKKKNHICQYYIYDLQNRIAEM 335
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
+T+ +++ ++ E ++EM++ S +K +EKK N + +KF + K +F
Sbjct: 336 KTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDIEKK---LNKV-TKF---IEQNKEKF 388
Query: 129 -ECDIAKSELEIFLSTQSKETKKLA-DLEANLEKVQTTLT---ERKTLCEELTTRVPAME 183
+ D+ ++ L + + KKL L+ + EKV+ + + K + E TTR ++E
Sbjct: 389 TQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSIPAKSKNVINETTTRNNSLE 448
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNN 228
E + +L ++ + K Q + +E+ EK E M ++S N
Sbjct: 449 KEREKEEKKLKEVM-DSLKQETQGLQKEKEIQEK-ELMGFNKSVN 491
Score = 150 (57.9 bits), Expect = 2.5e-62, Sum P(2) = 2.5e-62
Identities = 39/93 (41%), Positives = 59/93 (63%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLVA +L+QA R+ Y +R+VTL+G IIE SGTM+GGGS +RG MG +
Sbjct: 712 DTLVANNLDQATRVAYQRDRRWRVVTLQGQIIEQSGTMTGGGSKVMRGRMG--------S 763
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
S+V ++ V+E + +E +L S+Q +V+ Q
Sbjct: 764 SVVDEISVEE--VNKMECQLERHSKQAAQVQEQ 794
Score = 83 (34.3 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 380 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETL 416
+TLVA +L+QA R+ Y +R+VTL+G IIE S T+
Sbjct: 712 DTLVANNLDQATRVAYQRDRRWRVVTLQGQIIEQSGTM 749
Score = 70 (29.7 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 39/173 (22%), Positives = 77/173 (44%)
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAK 125
GE +V+ +E+E A LE K E + ++E+ +KK + + K
Sbjct: 280 GEKLNRVKMVEKEKDA-LEGEKNIAIEFLTLENEI--FKKKNHICQYYIYDLQNRIAEMK 336
Query: 126 TRFECDIAKSELEI-----FLSTQSK-ETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
T+ E I + EI LS + K + + D+E L KV + + K +L
Sbjct: 337 TQKE-KIHEDTKEITEKSNVLSNEMKAKNSAVKDIEKKLNKVTKFIEQNKEKFTQLDLED 395
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM--QTSRSNNRL 230
+ ++ + ++ L ++ K ++VE+L + + K +++ +T+ NN L
Sbjct: 396 VQVREKLKHATSKAKKLEKQLQKDKEKVEEL-KSIPAKSKNVINETTTRNNSL 447
Score = 51 (23.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 17/94 (18%), Positives = 44/94 (46%)
Query: 150 KLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEK 209
++A+++ EK+ E L+ + A S + + +L +T+ + ++ +
Sbjct: 331 RIAEMKTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDIEKKLNKVTKFIEQNKEKFTQ 390
Query: 210 LAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
L E + RE ++ + S + ++ +Q K + +V
Sbjct: 391 LDLEDVQVREKLKHATSKAKKLEKQLQ-KDKEKV 423
Score = 45 (20.9 bits), Expect = 1.5e-57, Sum P(3) = 1.5e-57
Identities = 13/53 (24%), Positives = 25/53 (47%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+++ EK + L+TEL+ + EV L ++E+ L ++K
Sbjct: 944 KEIKDTEKEINDLKTELKNIEDNAEEVIKNTKDAEKSLPEIQKEHRALLQELK 996
>MGI|MGI:1917349 [details] [associations]
symbol:Smc4 "structural maintenance of chromosomes 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000796 "condensin complex" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=ISO] [GO:0010032
"meiotic chromosome condensation" evidence=IMP] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0045132 "meiotic
chromosome segregation" evidence=IMP] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IMP]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 MGI:MGI:1917349
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0006310 GO:GO:0046982
GO:GO:0045132 GO:GO:0007076 GO:GO:0051383 GO:GO:0000796
GO:GO:0010032 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 PDB:3L51
PDBsum:3L51 OMA:IAIEFLT CTD:10051 HOGENOM:HOG000184777
HOVERGEN:HBG106696 OrthoDB:EOG4PZJ5V EMBL:AJ534940 EMBL:BC005507
EMBL:BC062939 EMBL:AK088350 EMBL:AK088846 IPI:IPI00229397
RefSeq:NP_598547.1 UniGene:Mm.206841 ProteinModelPortal:Q8CG47
SMR:Q8CG47 STRING:Q8CG47 PhosphoSite:Q8CG47 PaxDb:Q8CG47
PRIDE:Q8CG47 Ensembl:ENSMUST00000042901 GeneID:70099 KEGG:mmu:70099
UCSC:uc008pma.1 InParanoid:Q8CG47 ChiTaRS:SMC4
EvolutionaryTrace:Q8CG47 NextBio:330998 Bgee:Q8CG47 CleanEx:MM_SMC4
Genevestigator:Q8CG47 GermOnline:ENSMUSG00000034349 Uniprot:Q8CG47
Length = 1286
Score = 512 (185.3 bits), Expect = 1.4e-61, Sum P(2) = 1.4e-61
Identities = 124/380 (32%), Positives = 213/380 (56%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY-VNMKN 64
K+ E+ EK T++ L D++ E +L+ A + + LE +Q+ ++ + + K
Sbjct: 379 KFIEQNKEKFTQLDL--EDVQVRE-KLKHATSKAKKLEKQLQKDKEKVEELKSVPAKSKT 435
Query: 65 -LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E T+ +E+E + +K+ D ++ L+ EK+ +E ++G F SV
Sbjct: 436 VINETTTRNNSLEKEREKEEKKLKEVMDSLKQETQGLQK-EKEIQEKELMG--FNKSVNE 492
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
A+++ E +A+SEL+I+LS + +L+ + L TL ERK +++ T++P +
Sbjct: 493 ARSKME--VAQSELDIYLSRHNTAVSQLSKAKEALITASETLKERKAAIKDINTKLPQTQ 550
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E+ E L LT+EE L V L ++V E + S+ +RS +++D ++Q K R+
Sbjct: 551 QELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGRI 610
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLD 303
+KYDIA+S+ C AL+YIV ++++ + + +K+ N+G I LD
Sbjct: 611 PGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKKHNIGIATFIGLD 670
Query: 304 KMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSG 363
KM + + K +TPEN PRL DL++V++E+IR AFYFA R+TLVA +L+QA R+ Y
Sbjct: 671 KMTVWAKKM-SKIQTPENTPRLFDLVKVKNEEIRQAFYFALRDTLVANNLDQATRVAYQR 729
Query: 364 GG-YRMVTLEGAIIEPSETL 382
+R+VTL+G IIE S T+
Sbjct: 730 DRRWRVVTLQGQIIEQSGTM 749
Score = 198 (74.8 bits), Expect = 2.2e-23, Sum P(2) = 2.2e-23
Identities = 68/225 (30%), Positives = 115/225 (51%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E R EKL RV++VE + ALE E A+ FL LEN + +K N I QY Y + E
Sbjct: 276 NEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEMFKKKNHICQYYIYDLQNRIAEI 335
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
T+ +++ ++ E ++EM++ S +K VEKK N + +KF + K +F
Sbjct: 336 TTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDVEKK---LNKV-TKF---IEQNKEKF 388
Query: 129 -ECDIAKSELEIFLSTQSKETKKLA-DLEANLEKVQ---TTLTERKTLCEELTTRVPAME 183
+ D+ ++ L + + KKL L+ + EKV+ + + KT+ E TTR ++E
Sbjct: 389 TQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSVPAKSKTVINETTTRNNSLE 448
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNN 228
E + +L ++ + K Q + +E+ EK E M ++S N
Sbjct: 449 KEREKEEKKLKEVM-DSLKQETQGLQKEKEIQEK-ELMGFNKSVN 491
Score = 159 (61.0 bits), Expect = 1.4e-61, Sum P(2) = 1.4e-61
Identities = 39/93 (41%), Positives = 61/93 (65%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLVA +L+QA R+ Y +R+VTL+G IIE SGTMSGGGS +RG MG +
Sbjct: 712 DTLVANNLDQATRVAYQRDRRWRVVTLQGQIIEQSGTMSGGGSKVMRGRMG--------S 763
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
S++ ++ V+E + +E++L S+Q M+++ Q
Sbjct: 764 SVIDEISVEE--VNKMESQLERHSKQAMQIQEQ 794
Score = 83 (34.3 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 19/38 (50%), Positives = 27/38 (71%)
Query: 380 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETL 416
+TLVA +L+QA R+ Y +R+VTL+G IIE S T+
Sbjct: 712 DTLVANNLDQATRVAYQRDRRWRVVTLQGQIIEQSGTM 749
Score = 70 (29.7 bits), Expect = 7.2e-10, Sum P(2) = 7.2e-10
Identities = 36/170 (21%), Positives = 78/170 (45%)
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWS-VFSA 124
GE +V+ +E+E A LE K E + ++E+ + + + + R + + +
Sbjct: 280 GEKLNRVKMVEKEKDA-LEGEKNIAIEFLTLENEMFKKKNHICQYYIYDLQNRIAEITTQ 338
Query: 125 KTRFECDIAK-SELEIFLSTQSK-ETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
K + D + +E LS + K + + D+E L KV + + K +L +
Sbjct: 339 KEKIHEDTKEITEKSNVLSNEMKAKNSAVKDVEKKLNKVTKFIEQNKEKFTQLDLEDVQV 398
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM--QTSRSNNRL 230
++ + ++ L ++ K ++VE+L + V K +++ +T+ NN L
Sbjct: 399 REKLKHATSKAKKLEKQLQKDKEKVEEL-KSVPAKSKTVINETTTRNNSL 447
Score = 49 (22.3 bits), Expect = 2.9e-56, Sum P(3) = 2.9e-56
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+++ EK + L+TEL+ + + EV L ++E+ L ++K
Sbjct: 944 KEIKDTEKEINDLKTELKNIEDKAEEVINNTKTAETSLPEIQKEHRNLLQELK 996
Score = 49 (22.3 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 17/94 (18%), Positives = 43/94 (45%)
Query: 150 KLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEK 209
++A++ EK+ E L+ + A S + + +L +T+ + ++ +
Sbjct: 331 RIAEITTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDVEKKLNKVTKFIEQNKEKFTQ 390
Query: 210 LAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
L E + RE ++ + S + ++ +Q K + +V
Sbjct: 391 LDLEDVQVREKLKHATSKAKKLEKQLQ-KDKEKV 423
Score = 44 (20.5 bits), Expect = 2.0e-11, Sum P(2) = 2.0e-11
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 468 VSTDTSLVKDL-EVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+S + V L + KE + + ET L+ ++ T+L T ELK K++E
Sbjct: 508 LSRHNTAVSQLSKAKEALITASET-LKERKAAIKDINTKLPQTQQELKEKEKE 559
>ZFIN|ZDB-GENE-020419-21 [details] [associations]
symbol:smc4 "structural maintenance of chromosomes
4" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-020419-21 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 CTD:10051 HOGENOM:HOG000184777 HOVERGEN:HBG106696
HSSP:Q9X0R4 EMBL:AY099521 IPI:IPI00504040 RefSeq:NP_775360.1
UniGene:Dr.77769 ProteinModelPortal:Q8JGS5 STRING:Q8JGS5
PRIDE:Q8JGS5 GeneID:192332 KEGG:dre:192332 InParanoid:Q8JGS5
NextBio:20797168 ArrayExpress:Q8JGS5 Bgee:Q8JGS5 Uniprot:Q8JGS5
Length = 1289
Score = 501 (181.4 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 115/379 (30%), Positives = 210/379 (55%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLG 66
KY E + EK T++ L + +++ + +L+ +Q+ ++ +
Sbjct: 380 KYIESQKEKFTQLDLQDVEVREKLKHTKSKTK--KLQKQLQKDQEKLEEVRGVPASSEKI 437
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVE--KKGKESNVIGSKFRWSVFSA 124
E Q+ E E LE +K + MES K E K ++ K+ KE ++ + SV
Sbjct: 438 ITEASAQKEELEKKKLLEE-QKLAEVMESLKEETKGLQDDKEKKEKELL--ELSKSV--N 492
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+TR D+A+SEL+I+LS + +L ++ L++ TL ER+ ++L ++PA E
Sbjct: 493 ETRSRMDVAQSELDIYLSQHNTAINQLNQAKSALQETVDTLRERRAAIKDLQVKIPAQEE 552
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVS 244
++ + L ++ ++ + QV + ++V+E + S+ ++RS ++++D +MQ K ++
Sbjct: 553 QLKKDERELEQISEQDKQTRAQVGDMRQKVAEAKSSLSSNRSRSKVLDTLMQQKRSGKIP 612
Query: 245 XXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDK 304
+KYD+A+S++CG+L+ I+ +T++ + + +K QN+G I LDK
Sbjct: 613 GILGRLGDLGAIDEKYDVAISSSCGSLDNILVDTIDTAQKCVTFLKAQNIGVATFIGLDK 672
Query: 305 MQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSGG 364
M+ + Q TPEN+PRL D+++V+DE +R AFYFA R+TLVA+DL QA R+ +
Sbjct: 673 MKVWQ-QSMGSISTPENIPRLFDMVRVKDESVRPAFYFALRDTLVAKDLEQATRVAFQKD 731
Query: 365 G-YRMVTLEGAIIEPSETL 382
+R+VTL+G IIE + T+
Sbjct: 732 KRWRVVTLQGQIIEQAGTM 750
Score = 210 (79.0 bits), Expect = 9.1e-24, Sum P(2) = 9.1e-24
Identities = 70/230 (30%), Positives = 120/230 (52%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E+R EKL RV++VE + ALE E KAV+FL LEN + +K N + + + +
Sbjct: 277 NEQRGEKLNRVKMVEKEKSALEGEKNKAVDFLNLENDIFKKRNLLCHFYVHDLQSRVSVK 336
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
E + QQ++++ + + T+EM+S +LK VEKK + +K+ + S K +F
Sbjct: 337 EAEKQQIQEDTKDLSDKSSQLTEEMKSKNEDLKAVEKKLTKL----TKY---IESQKEKF 389
Query: 129 -ECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL---CEELTTRVPAMES 184
+ D+ E+ L +TKKL + L+K Q L E + + E++ T A +
Sbjct: 390 TQLDLQDVEVREKLKHTKSKTKKL---QKQLQKDQEKLEEVRGVPASSEKIITEASAQKE 446
Query: 185 EIAESRA----RLADLT---REEAK-LLDQVEKLAREVSEKRESMQTSRS 226
E+ + + +LA++ +EE K L D EK +E+ E +S+ +RS
Sbjct: 447 ELEKKKLLEEQKLAEVMESLKEETKGLQDDKEKKEKELLELSKSVNETRS 496
Score = 150 (57.9 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
Identities = 38/117 (32%), Positives = 68/117 (58%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLVA+DL QA R+ + +R+VTL+G IIE +GTM+GGG ++G+MG ++ D
Sbjct: 713 DTLVAKDLEQATRVAFQKDKRWRVVTLQGQIIEQAGTMTGGGGRVMKGMMG--SSFCADV 770
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKS 529
+ + L+ E L T+L+ ++K ++E +++ EL+ K + ++S
Sbjct: 771 TQ-EQLDKMESALNKEVTQLQDCQKRKNQLEEKVHKARCELRDMKNTLEKYTATIQS 826
Score = 81 (33.6 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
Identities = 18/38 (47%), Positives = 27/38 (71%)
Query: 380 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETL 416
+TLVA+DL QA R+ + +R+VTL+G IIE + T+
Sbjct: 713 DTLVAKDLEQATRVAFQKDKRWRVVTLQGQIIEQAGTM 750
Score = 51 (23.0 bits), Expect = 6.0e-07, Sum P(2) = 6.0e-07
Identities = 15/86 (17%), Positives = 37/86 (43%)
Query: 155 EANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREV 214
EA +++Q + +LT + + ++ +L LT+ ++ +L +
Sbjct: 337 EAEKQQIQEDTKDLSDKSSQLTEEMKSKNEDLKAVEKKLTKLTKYIESQKEKFTQLDLQD 396
Query: 215 SEKRESMQTSRSNNRLIDFVMQLKSE 240
E RE ++ ++S + + +Q E
Sbjct: 397 VEVREKLKHTKSKTKKLQKQLQKDQE 422
Score = 50 (22.7 bits), Expect = 2.4e-13, Sum P(2) = 2.4e-13
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 467 TVSTDTSLVKDLEVK----EKRLASLETELRILSQQKMEVETQL 506
T+ + +KDL+VK E++L E EL +S+Q + Q+
Sbjct: 532 TLRERRAAIKDLQVKIPAQEEQLKKDERELEQISEQDKQTRAQV 575
Score = 41 (19.5 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 35/159 (22%), Positives = 60/159 (37%)
Query: 86 IKKCTDEMESAKSELKTVEKKGKESNVI-GSKFRWSVFSAKTRFECDIAKSELEIFLSTQ 144
I+ CT E+ K ++K+G + +VI S F + + K ++ F
Sbjct: 154 IQSCTVEVHFQK----IIDKEGDDYDVIPDSSFYVARTAGKDNSSAYYINTKKATFKDVG 209
Query: 145 SKETKKLADLEANL------EKVQTTLTERKTLCEELTTRVPAMESEIAESRAR--LADL 196
+ DL+ N E Q + + K E + +E I R + + L
Sbjct: 210 TLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSCRLKEPINIL 269
Query: 197 TREEAKLLDQV-EKLAREVSEKRESMQTSRSNNRLIDFV 234
R L +Q EKL R ++E N+ +DF+
Sbjct: 270 CRRVEALNEQRGEKLNRVKMVEKEKSALEGEKNKAVDFL 308
Score = 39 (18.8 bits), Expect = 1.1e-11, Sum P(3) = 1.1e-11
Identities = 10/30 (33%), Positives = 18/30 (60%)
Query: 330 QVQDEKIRLAFYFATRETLVAQDLNQAKRI 359
+++D K L Y AT ++L Q+L+ +I
Sbjct: 809 ELRDMKNTLEKYTATIQSLTEQELHLKPQI 838
Score = 38 (18.4 bits), Expect = 1.0e-53, Sum P(3) = 1.0e-53
Identities = 12/51 (23%), Positives = 23/51 (45%)
Query: 464 RKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
R T+ D + K L+ ++ +L + T+L S + + + G LK
Sbjct: 885 RLHTLIVDINSHK-LKAQQDKLDQINTQLDQCSSAVTKAQVAIKTAGRNLK 934
>UNIPROTKB|F1NDN4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 EMBL:AADN02021066
IPI:IPI00684483 Ensembl:ENSGALT00000032997 ArrayExpress:F1NDN4
Uniprot:F1NDN4
Length = 1274
Score = 479 (173.7 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 114/377 (30%), Positives = 205/377 (54%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERYVNM--KNLG 66
EE K T++ L D+K E +L+ A + + LE +Q+ ++ + + + KN+
Sbjct: 355 EENKNKFTQLDL--QDVKVRE-KLKHAKSKAKKLEKQLQKDKEKVEELKNVPSSSEKNIS 411
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
+ +K + +E+ E +K+ ++ E++ EK+GKE ++ +F +V A++
Sbjct: 412 DATSKKELLEKAKDKEEEKLKQVMSSLQEETREIQK-EKEGKEKELM--EFCKTVNDARS 468
Query: 127 RFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEI 186
+ D+A++EL+I+L+ + +L + + L TL +RK +++ ++P E E+
Sbjct: 469 KM--DVAQAELDIYLTRYNTAVSQLDEAKEALMTTSETLKQRKAAIKDIDIKLPTAEQEL 526
Query: 187 AESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVSXX 246
E +L L +EE D V L ++V E + S+ RS ++++ +++ K +S
Sbjct: 527 KEKENKLEKLKKEELNAQDLVRNLRQKVEEAKSSLAQHRSRGKVLEALLEQKRSGSISGI 586
Query: 247 XXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDKMQ 306
+KYD+A+S++C AL+YIV +T++ + + +K+ +G I LDKM
Sbjct: 587 HGRLGDLGAIDEKYDVAISSSCAALDYIVVDTIDIAQQCVEFLKKTEIGAATFIALDKMA 646
Query: 307 QYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSGGG- 365
+ K TPEN PRLIDL++V+D+ AFYFA R+TLV +DL A RI +
Sbjct: 647 VWKKNL-QKIPTPENAPRLIDLVKVEDKSFSPAFYFALRDTLVVKDLEDATRIAFQRDKR 705
Query: 366 YRMVTLEGAIIEPSETL 382
+R+VTL+G IIE S T+
Sbjct: 706 WRVVTLKGEIIEQSGTM 722
Score = 211 (79.3 bits), Expect = 2.5e-22, Sum P(2) = 2.5e-22
Identities = 68/230 (29%), Positives = 118/230 (51%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E+R EKL RV++VE + ALE + KA+ FL LEN + ++ N I QY Y K + +
Sbjct: 249 NEQRGEKLNRVKMVEKEKDALEGDKNKAIEFLSLENKMFKEKNHICQYYIYDLQKRINDL 308
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVI----GSKF-RWSVFS 123
ET+ + +++E E K DEM+S LK +EKK + V+ +KF + +
Sbjct: 309 ETQKENIQKETKDINEKSSKLADEMKSKSKALKDLEKKIDKITVLIEENKNKFTQLDLQD 368
Query: 124 AKTRFECDIAKSE---LEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVP 180
K R + AKS+ LE L ++ ++L ++ ++ EK + T +K L E+ +
Sbjct: 369 VKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSSSEKNISDATSKKELLEKAKDKE- 427
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEK----LAREVSEKRESMQTSRS 226
E ++ + + L + TRE K + EK + V++ R M +++
Sbjct: 428 --EEKLKQVMSSLQEETREIQKEKEGKEKELMEFCKTVNDARSKMDVAQA 475
Score = 135 (52.6 bits), Expect = 1.6e-55, Sum P(2) = 1.6e-55
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLV +DL A RI + +R+VTL+G IIE SGTM+GGG ++G MG +
Sbjct: 685 DTLVVKDLEDATRIAFQRDKRWRVVTLKGEIIEQSGTMTGGGGKVMKGRMG--------S 736
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
S+V D+ +E + LE+EL+ SQ+ ++ E +
Sbjct: 737 SVVTDVSPEE--VNRLESELQRDSQRAVQCEEE 767
Score = 85 (35.0 bits), Expect = 7.7e-09, Sum P(2) = 7.7e-09
Identities = 39/178 (21%), Positives = 85/178 (47%)
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKS---ELKTVEKKG-KESNVIGSKFRWS---- 120
ET +Q ++L ++ ++K D +E K+ E ++E K KE N I + +
Sbjct: 246 ETLNEQRGEKLN-RVKMVEKEKDALEGDKNKAIEFLSLENKMFKEKNHICQYYIYDLQKR 304
Query: 121 VFSAKTRFECDIAKSELEIF-----LSTQSK-ETKKLADLEANLEKVQTTLTERKTLCEE 174
+ +T+ E +I K +I L+ + K ++K L DLE ++K+ + E K +
Sbjct: 305 INDLETQKE-NIQKETKDINEKSSKLADEMKSKSKALKDLEKKIDKITVLIEENKNKFTQ 363
Query: 175 LTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
L + + ++ ++++ L ++ K ++VE+L S +++ + S L++
Sbjct: 364 LDLQDVKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSSSEKNISDATSKKELLE 421
Score = 72 (30.4 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 40/190 (21%), Positives = 84/190 (44%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLEL-ENCVQRKHNEIYQYERYVNMKNLGE 67
D+E+ E+L V + E + A + EL E ++ ++ Q M +L E
Sbjct: 392 DKEKVEELKNVP------SSSEKNISDATSKKELLEKAKDKEEEKLKQV-----MSSLQE 440
Query: 68 HETKVQQ----MEQELTANLESIKKCTDEMESAKSELKT-VEKKGKESNVIGSKFRWSVF 122
++Q+ E+EL +++ +M+ A++EL + + + + +
Sbjct: 441 ETREIQKEKEGKEKELMEFCKTVNDARSKMDVAQAELDIYLTRYNTAVSQLDEAKEALMT 500
Query: 123 SAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
+++T + A +++I L T +E K + E LEK++ + L L +V
Sbjct: 501 TSETLKQRKAAIKDIDIKLPTAEQELK---EKENKLEKLKKEELNAQDLVRNLRQKVEEA 557
Query: 183 ESEIAESRAR 192
+S +A+ R+R
Sbjct: 558 KSSLAQHRSR 567
Score = 45 (20.9 bits), Expect = 4.7e-46, Sum P(2) = 4.7e-46
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSP 530
DT +VKDLE + + R+++ + +E TG K K + ++ SP
Sbjct: 685 DTLVVKDLEDATRIAFQRDKRWRVVTLKGEIIEQSGTMTGGGGKVMKGRMGSSVVTDVSP 744
Query: 531 K 531
+
Sbjct: 745 E 745
>UNIPROTKB|F1P3C6 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9031 "Gallus gallus" [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:AADN02021066 IPI:IPI00573837 Ensembl:ENSGALT00000015551
ArrayExpress:F1P3C6 Uniprot:F1P3C6
Length = 1300
Score = 479 (173.7 bits), Expect = 1.7e-55, Sum P(2) = 1.7e-55
Identities = 114/377 (30%), Positives = 205/377 (54%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERYVNM--KNLG 66
EE K T++ L D+K E +L+ A + + LE +Q+ ++ + + + KN+
Sbjct: 381 EENKNKFTQLDL--QDVKVRE-KLKHAKSKAKKLEKQLQKDKEKVEELKNVPSSSEKNIS 437
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
+ +K + +E+ E +K+ ++ E++ EK+GKE ++ +F +V A++
Sbjct: 438 DATSKKELLEKAKDKEEEKLKQVMSSLQEETREIQK-EKEGKEKELM--EFCKTVNDARS 494
Query: 127 RFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEI 186
+ D+A++EL+I+L+ + +L + + L TL +RK +++ ++P E E+
Sbjct: 495 KM--DVAQAELDIYLTRYNTAVSQLDEAKEALMTTSETLKQRKAAIKDIDIKLPTAEQEL 552
Query: 187 AESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVSXX 246
E +L L +EE D V L ++V E + S+ RS ++++ +++ K +S
Sbjct: 553 KEKENKLEKLKKEELNAQDLVRNLRQKVEEAKSSLAQHRSRGKVLEALLEQKRSGSISGI 612
Query: 247 XXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDKMQ 306
+KYD+A+S++C AL+YIV +T++ + + +K+ +G I LDKM
Sbjct: 613 HGRLGDLGAIDEKYDVAISSSCAALDYIVVDTIDIAQQCVEFLKKTEIGAATFIALDKMA 672
Query: 307 QYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSGGG- 365
+ K TPEN PRLIDL++V+D+ AFYFA R+TLV +DL A RI +
Sbjct: 673 VWKKNL-QKIPTPENAPRLIDLVKVEDKSFSPAFYFALRDTLVVKDLEDATRIAFQRDKR 731
Query: 366 YRMVTLEGAIIEPSETL 382
+R+VTL+G IIE S T+
Sbjct: 732 WRVVTLKGEIIEQSGTM 748
Score = 211 (79.3 bits), Expect = 2.6e-22, Sum P(2) = 2.6e-22
Identities = 68/230 (29%), Positives = 118/230 (51%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E+R EKL RV++VE + ALE + KA+ FL LEN + ++ N I QY Y K + +
Sbjct: 275 NEQRGEKLNRVKMVEKEKDALEGDKNKAIEFLSLENKMFKEKNHICQYYIYDLQKRINDL 334
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVI----GSKF-RWSVFS 123
ET+ + +++E E K DEM+S LK +EKK + V+ +KF + +
Sbjct: 335 ETQKENIQKETKDINEKSSKLADEMKSKSKALKDLEKKIDKITVLIEENKNKFTQLDLQD 394
Query: 124 AKTRFECDIAKSE---LEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVP 180
K R + AKS+ LE L ++ ++L ++ ++ EK + T +K L E+ +
Sbjct: 395 VKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSSSEKNISDATSKKELLEKAKDKE- 453
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEK----LAREVSEKRESMQTSRS 226
E ++ + + L + TRE K + EK + V++ R M +++
Sbjct: 454 --EEKLKQVMSSLQEETREIQKEKEGKEKELMEFCKTVNDARSKMDVAQA 501
Score = 135 (52.6 bits), Expect = 1.7e-55, Sum P(2) = 1.7e-55
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLV +DL A RI + +R+VTL+G IIE SGTM+GGG ++G MG +
Sbjct: 711 DTLVVKDLEDATRIAFQRDKRWRVVTLKGEIIEQSGTMTGGGGKVMKGRMG--------S 762
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
S+V D+ +E + LE+EL+ SQ+ ++ E +
Sbjct: 763 SVVTDVSPEE--VNRLESELQRDSQRAVQCEEE 793
Score = 85 (35.0 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 39/178 (21%), Positives = 85/178 (47%)
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKS---ELKTVEKKG-KESNVIGSKFRWS---- 120
ET +Q ++L ++ ++K D +E K+ E ++E K KE N I + +
Sbjct: 272 ETLNEQRGEKLN-RVKMVEKEKDALEGDKNKAIEFLSLENKMFKEKNHICQYYIYDLQKR 330
Query: 121 VFSAKTRFECDIAKSELEIF-----LSTQSK-ETKKLADLEANLEKVQTTLTERKTLCEE 174
+ +T+ E +I K +I L+ + K ++K L DLE ++K+ + E K +
Sbjct: 331 INDLETQKE-NIQKETKDINEKSSKLADEMKSKSKALKDLEKKIDKITVLIEENKNKFTQ 389
Query: 175 LTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
L + + ++ ++++ L ++ K ++VE+L S +++ + S L++
Sbjct: 390 LDLQDVKVREKLKHAKSKAKKLEKQLQKDKEKVEELKNVPSSSEKNISDATSKKELLE 447
Score = 72 (30.4 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 40/190 (21%), Positives = 84/190 (44%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLEL-ENCVQRKHNEIYQYERYVNMKNLGE 67
D+E+ E+L V + E + A + EL E ++ ++ Q M +L E
Sbjct: 418 DKEKVEELKNVP------SSSEKNISDATSKKELLEKAKDKEEEKLKQV-----MSSLQE 466
Query: 68 HETKVQQ----MEQELTANLESIKKCTDEMESAKSELKT-VEKKGKESNVIGSKFRWSVF 122
++Q+ E+EL +++ +M+ A++EL + + + + +
Sbjct: 467 ETREIQKEKEGKEKELMEFCKTVNDARSKMDVAQAELDIYLTRYNTAVSQLDEAKEALMT 526
Query: 123 SAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
+++T + A +++I L T +E K + E LEK++ + L L +V
Sbjct: 527 TSETLKQRKAAIKDIDIKLPTAEQELK---EKENKLEKLKKEELNAQDLVRNLRQKVEEA 583
Query: 183 ESEIAESRAR 192
+S +A+ R+R
Sbjct: 584 KSSLAQHRSR 593
Score = 45 (20.9 bits), Expect = 5.1e-46, Sum P(2) = 5.1e-46
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSP 530
DT +VKDLE + + R+++ + +E TG K K + ++ SP
Sbjct: 711 DTLVVKDLEDATRIAFQRDKRWRVVTLKGEIIEQSGTMTGGGGKVMKGRMGSSVVTDVSP 770
Query: 531 K 531
+
Sbjct: 771 E 771
>FB|FBgn0015391 [details] [associations]
symbol:glu "gluon" species:7227 "Drosophila melanogaster"
[GO:0007076 "mitotic chromosome condensation" evidence=ISS;NAS;IMP]
[GO:0000796 "condensin complex" evidence=ISS;NAS;TAS] [GO:0000166
"nucleotide binding" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0007422 "peripheral nervous system development"
evidence=TAS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0000785 "chromatin" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0005694 "chromosome"
evidence=IDA] [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISS;NAS;IMP] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0000819 "sister chromatid segregation"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0007052
GO:GO:0000166 GO:GO:0003677 GO:GO:0006281 GO:GO:0007422
GO:GO:0000785 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 SUPFAM:SSF75553 HSSP:Q9X0R4 FlyBase:FBgn0015391
EMBL:AF185287 ProteinModelPortal:Q9U6I2 STRING:Q9U6I2 PRIDE:Q9U6I2
InParanoid:Q9U6I2 ArrayExpress:Q9U6I2 Bgee:Q9U6I2 Uniprot:Q9U6I2
Length = 1409
Score = 558 (201.5 bits), Expect = 6.7e-54, Sum P(2) = 6.7e-54
Identities = 160/518 (30%), Positives = 264/518 (50%)
Query: 2 EVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVN 61
E + K EE + + + ++ L +E + + +E N QRK ++ +
Sbjct: 371 ETIIRKEIEEYEALVKKREQIKKRLVTVESAYTEIQSTMENTN-KQRKKDKAQIEKNEKE 429
Query: 62 MKNLGEHETKVQQMEQELTANLESIK--KCT--DEMESAKSEL-KTV----EKKGKESN- 111
+++L + K Q+ ++ LES++ K T +E+E ++EL KT EK+ K S+
Sbjct: 430 LEDLHKLPEKNQREIEDCNKKLESLEVNKVTLNEELEKQQAELTKTTAPLTEKRLKLSDE 489
Query: 112 VIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL 171
++G K + V +AK E + +S+L+I ++ E++K L+++ E+ Q +L E+ T
Sbjct: 490 LVGLKEK--VNTAKG--EVQVFESQLKILKQAETTESRKYETLKSSYEQSQKSLEEKVTR 545
Query: 172 CEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLI 231
+EL +P M++EIA A + + +EE L Q KL E++E+ MQ RSNN+++
Sbjct: 546 VDELKESIPRMKTEIASKSAEVDKMVKEERNLSMQCNKLRTEINERSSVMQAQRSNNKVL 605
Query: 232 DFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKR 291
DF+M++K E ++ KYDIA+STACG L+ IVT+ E A I A+K
Sbjct: 606 DFLMRMKMEGKIPGILGRLGDLGGIDAKYDIAISTACGRLDNIVTDNYETASAAIGALKE 665
Query: 292 QNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQ 351
NVGR I LDK++ + + + TPENVPRL DL++V+D+++R AFYFA R TLV
Sbjct: 666 YNVGRATFITLDKIEHHRREANSRINTPENVPRLYDLVKVEDDRVRTAFYFALRNTLVCD 725
Query: 352 DLNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIE 411
DL Q RI Y YR+VTL G +IE + T+ + G G R T E A
Sbjct: 726 DLEQGTRIAYGRERYRVVTLRGEMIEMTGTMSGGGSRPIR--GKMGTQVRTKTAESADSS 783
Query: 412 PSETLVAQDLN-QAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVST 470
+D+ QA+ + + Y +G++ T+ G R A T
Sbjct: 784 QISQKALEDMQIQAEEL-QARVNYCQEQ-QGSLEREIQTLKNGLQRD-EAEYKRLAVSIT 840
Query: 471 D-----TSLVKDLEVKEKRLASLETELRILSQQKMEVE 503
S +K E + +R+ T+ R + +++ ++E
Sbjct: 841 SLEQQMASNLKQCEAQRQRMLKKTTDERAVKEREEQIE 878
Score = 225 (84.3 bits), Expect = 7.5e-15, P = 7.5e-15
Identities = 118/491 (24%), Positives = 206/491 (41%)
Query: 63 KNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVF 122
K + E+E V++ EQ + L +++ E++S KK K K +
Sbjct: 376 KEIEEYEALVKKREQ-IKKRLVTVESAYTEIQSTMENTNKQRKKDKAQIEKNEKELEDLH 434
Query: 123 SA--KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVP 180
K + E + +LE + ++L +A L K LTE++ +L+ +
Sbjct: 435 KLPEKNQREIEDCNKKLESLEVNKVTLNEELEKQQAELTKTTAPLTEKRL---KLSDELV 491
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKL-AREVSEKRESM-QTSRSNNRLIDFVMQLK 238
++ ++ ++ + + + K+L Q E +R+ + S Q+ +S + V +LK
Sbjct: 492 GLKEKVNTAKGEV-QVFESQLKILKQAETTESRKYETLKSSYEQSQKSLEEKVTRVDELK 550
Query: 239 -SENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
S R+ K + +S C L TE E + A +R N
Sbjct: 551 ESIPRMKTEIASKSAEVDKMVKEERNLSMQCNKLR---TEINERSSVMQA--QRSN---- 601
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATR--ETLVAQDLNQ 355
N + LD + + + + P + RL DL + D K +A A + +V +
Sbjct: 602 NKV-LDFLMRMKMEG----KIPGILGRLGDLGGI-DAKYDIAISTACGRLDNIVTDNYET 655
Query: 356 AKR-IG----YSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAII 410
A IG Y+ G +TL+ IE +N + + Y +V +E +
Sbjct: 656 ASAAIGALKEYNVGRATFITLDK--IEHHRREANSRINTPENVPRL---YDLVKVEDDRV 710
Query: 411 EPS------ETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGR 464
+ TLV DL Q RI Y YR+VTL G +IE +GTMSGGGS PIRG MG
Sbjct: 711 RTAFYFALRNTLVCDDLEQGTRIAYGRERYRVVTLRGEMIEMTGTMSGGGSRPIRGKMGT 770
Query: 465 ----KATVSTDTSLVKDLEVKEKRLASLETELRI--LSQQKMEVETQLNCTGNELKYKKQ 518
K S D+S + +++ ++ + E + R+ +Q+ +E ++ N L+ +
Sbjct: 771 QVRTKTAESADSSQISQKALEDMQIQAEELQARVNYCQEQQGSLEREIQTLKNGLQRDEA 830
Query: 519 EYDTCLIDVKS 529
EY + + S
Sbjct: 831 EYKRLAVSITS 841
Score = 149 (57.5 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 59/240 (24%), Positives = 123/240 (51%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE 69
++RTEK R +L E ++K LE +AV++L+ EN + R + + ++ +++K +
Sbjct: 284 DDRTEKHNRCKLAEREMKDLEQPFNEAVDYLKKENELVRTKS--FHIQKIISIK-----K 336
Query: 70 TKVQQMEQELTANLESIK---KCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
+K++Q QE A E +K + T ++ +++E +T+ +K E K R + K
Sbjct: 337 SKLEQYTQEHEACAEELKTHDEGTAALKQSRAEKETIIRKEIEEYEALVKKREQI--KKR 394
Query: 127 RFECDIAKSELEIFLSTQSKETKK-LADLEAN---LEKVQTTLTERKTLCEELTTRVPAM 182
+ A +E++ + +K+ KK A +E N LE + + + E+ ++ ++
Sbjct: 395 LVTVESAYTEIQSTMENTNKQRKKDKAQIEKNEKELEDLHKLPEKNQREIEDCNKKLESL 454
Query: 183 E-SEIA---ESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLK 238
E +++ E + A+LT+ A L ++ KL+ E+ +E + T++ ++ F QLK
Sbjct: 455 EVNKVTLNEELEKQQAELTKTTAPLTEKRLKLSDELVGLKEKVNTAKGEVQV--FESQLK 512
Score = 42 (19.8 bits), Expect = 8.0e-06, Sum P(2) = 8.0e-06
Identities = 14/44 (31%), Positives = 23/44 (52%)
Query: 315 KYRTP--ENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQA 356
K ++P E + RLI + +D R+T++AQ+L QA
Sbjct: 1334 KSQSPPSEQIVRLISELG-RDTTFAPPLESTVRDTILAQNLKQA 1376
Score = 41 (19.5 bits), Expect = 6.7e-54, Sum P(2) = 6.7e-54
Identities = 8/36 (22%), Positives = 22/36 (61%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQL 506
+ +L ++++ E++L SL + ++K E+E ++
Sbjct: 955 NNNLRENIKAAEEKLKSLNEDRNKAKEKKEELEKEM 990
>UNIPROTKB|Q9ERA5 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:47230 "Microtus arvalis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 SUPFAM:SSF75553
HOVERGEN:HBG106696 EMBL:AJ299713 EMBL:AJ299717
ProteinModelPortal:Q9ERA5 Uniprot:Q9ERA5
Length = 1243
Score = 534 (193.0 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
Identities = 156/535 (29%), Positives = 274/535 (51%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY-VNMKN 64
K+ EE EK ++ L D++ E +L+ A + + LE +Q+ ++ + + K
Sbjct: 336 KFIEENKEKFRQLDL--EDVQVRE-KLKHATSKAKKLEKQLQKDKEKVEELKSIPAKSKT 392
Query: 65 L-GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E TK +E+E + +K+ D ++ L+ EK+ +E ++G F SV
Sbjct: 393 IINETTTKSSSLEKEKEKEEKKLKEVMDSLKQETQGLQK-EKEDQEKELMG--FNKSVNE 449
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
A+++ E +A+SEL+I+LS + +L+ + L TL ERK E+ T++P +
Sbjct: 450 ARSKME--VAQSELDIYLSRHNTAVSQLSKAKETLITASETLKERKAAIGEINTKLPQTQ 507
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E+ E L LT+EE L V L ++V E + S+ +RS +++D ++Q K R+
Sbjct: 508 QELKEKEKELQKLTQEEINLKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGRI 567
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLD 303
+KYDIA+S+ C AL+YIV ++++ + + +KR N+G I LD
Sbjct: 568 PGIYGRLGDLGAIDEKYDIAISSCCHALDYIVVDSIDTAQECVNFLKRHNIGVATFIGLD 627
Query: 304 KMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSG 363
KM + + K +TPEN PRL DL++ ++E+IR AFYFA R+TLVA +L+QA R+ Y
Sbjct: 628 KMTVWAKKMA-KIQTPENTPRLFDLVKAKNEEIRQAFYFALRDTLVADNLDQATRVAYQK 686
Query: 364 GG-YRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLN 422
+R+VTL+G IIE S T+ ++ R G G +V + + E+ + +
Sbjct: 687 DRRWRVVTLQGQIIEQSGTMTGGG-SKVMR-GRMGSSV-IVEISEEEVNKMESQLQKHSK 743
Query: 423 QAKRIGYSGGGY--RMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
QA+RI + R+V L + E T+ ++ I+GL ++ ++ +K+LE
Sbjct: 744 QARRIQEQKVQHEERVVKLRHSEREMRNTLEKFAAS-IQGLSDQEEYLTVQ---IKELEA 799
Query: 481 KEKRLASLETELRILSQQ----KMEVETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
A + + ++L + K E + G K+ +DT +I++ + K
Sbjct: 800 NVLTTAPDKKKQKLLEENVSAFKKEYDAVAEKAGKVEAEVKRLHDT-IIEINNRK 853
Score = 191 (72.3 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 65/234 (27%), Positives = 120/234 (51%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E R EKL RV++VE + A+E E A+ FL LE + +K N + QY Y K + E
Sbjct: 233 NENRGEKLNRVKMVEKEKDAVEGEKNIAIEFLTLEKEMFKKKNHVCQYYIYDLQKRIDEM 292
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
+T+ +++ ++ E ++EM++ S +K +EKK ++ +KF + K +F
Sbjct: 293 KTQKEKIHEDTKEITEKSNMLSNEMKAKNSAVKDIEKKLHKA----TKF---IEENKEKF 345
Query: 129 -ECDIAKSELEIFLSTQSKETKKLA-DLEANLEKVQTTLT---ERKTLCEELTTRVPAME 183
+ D+ ++ L + + KKL L+ + EKV+ + + KT+ E TT+ ++E
Sbjct: 346 RQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEELKSIPAKSKTIINETTTKSSSLE 405
Query: 184 SEIAESRARLA---DLTREEAKLL-----DQVEKLA---REVSEKRESMQTSRS 226
E + +L D ++E + L DQ ++L + V+E R M+ ++S
Sbjct: 406 KEKEKEEKKLKEVMDSLKQETQGLQKEKEDQEKELMGFNKSVNEARSKMEVAQS 459
Score = 50 (22.7 bits), Expect = 1.6e-52, Sum P(2) = 1.6e-52
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+++ EK L+ EL+ + + EV + N L ++E+ L ++K
Sbjct: 901 KEIKDTEKETNDLKAELKAIEDKAEEVIKKTNAAEESLPEIQKEHRNLLQELK 953
>UNIPROTKB|E9PD53 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0030261
"chromosome condensation" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 EMBL:AC024221 HGNC:HGNC:14013
IPI:IPI00793575 ProteinModelPortal:E9PD53 SMR:E9PD53
Ensembl:ENST00000469762 UCSC:uc003fdi.3 ArrayExpress:E9PD53
Bgee:E9PD53 Uniprot:E9PD53
Length = 1263
Score = 529 (191.3 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 130/395 (32%), Positives = 216/395 (54%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERYVNMKN- 64
K+ EE EK T++ L D++ E +L+ A + + LE +Q+ ++ +++ N
Sbjct: 356 KFIEENKEKFTQLDL--EDVQVRE-KLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNN 412
Query: 65 -LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E T+ +E+E + +K+ D ++ L+ EK+ +E ++G F SV
Sbjct: 413 IINETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQK-EKESREKELMG--FSKSVNE 469
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
A+++ D+A+SEL+I+LS + +L + L TL ERK ++ ++P E
Sbjct: 470 ARSKM--DVAQSELDIYLSRHNTAVSQLTKAKEALIAASETLKERKAAIRDIEGKLPQTE 527
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E+ E L LT+EE V L ++V E + S+ +RS +++D ++Q K R+
Sbjct: 528 QELKEKEKELQKLTQEETNFKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGRI 587
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLD 303
+KYD+A+S+ C AL+YIV ++++ + + +KRQN+G I LD
Sbjct: 588 PGIYGRLGDLGAIDEKYDVAISSCCHALDYIVVDSIDIAQECVNFLKRQNIGVATFIGLD 647
Query: 304 KMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSG 363
KM + + + +TPEN PRL DL++V+DEKIR AFYFA R+TLVA +L+QA R+ Y
Sbjct: 648 KMAVWAKKMTE-IQTPENTPRLFDLVKVKDEKIRQAFYFALRDTLVADNLDQATRVAYQK 706
Query: 364 GG-YRMVTLEGAIIEPSETLVAQDLNQAK-RIGYS 396
+R+VTL+G IIE S T+ K R+G S
Sbjct: 707 DRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSS 741
Score = 202 (76.2 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 72/228 (31%), Positives = 116/228 (50%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E R EKL RV++VE + ALE E A+ FL LEN + RK N + QY Y K + E
Sbjct: 253 NEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKNHVCQYYIYELQKRIAEM 312
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
ET+ +++ ++ E ++EM++ ++K EKK N I +KF + K +F
Sbjct: 313 ETQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDTEKK---LNKI-TKF---IEENKEKF 365
Query: 129 -ECDIAKSELEIFLSTQSKETKKLA-DLEANLEKVQ---TTLTERKTLCEELTTRVPAME 183
+ D+ ++ L + + KKL L+ + EKV+ + + + E TTR A+E
Sbjct: 366 TQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNIINETTTRNNALE 425
Query: 184 SEIAESRARLA---DLTREEAKLLDQVEKLAREVSEKRESMQTSRSNN 228
E + +L D ++E + L Q EK +RE +E M S+S N
Sbjct: 426 KEKEKEEKKLKEVMDSLKQETQGL-QKEKESRE----KELMGFSKSVN 468
Score = 156 (60.0 bits), Expect = 1.6e-23, Sum P(2) = 1.6e-23
Identities = 38/93 (40%), Positives = 62/93 (66%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLVA +L+QA R+ Y +R+VTL+G IIE SGTM+GGGS ++G MG +
Sbjct: 689 DTLVADNLDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMG--------S 740
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
SLV +E+ E+ + +E++L+ S++ M+++ Q
Sbjct: 741 SLV--IEISEEEVNKMESQLQNDSKKAMQIQEQ 771
Score = 54 (24.1 bits), Expect = 2.3e-52, Sum P(2) = 2.3e-52
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 464 RKATVSTDTSLVKDLEVK--EKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
R + D+ L + E+K EK + L EL+ L + EV N L ++E+
Sbjct: 907 RNLQKAQDSVLRTEKEIKDTEKEVDDLTAELKSLEDKAAEVVKNTNAAEESLPEIQKEHR 966
Query: 522 TCLIDVK 528
L ++K
Sbjct: 967 NLLQELK 973
Score = 46 (21.3 bits), Expect = 4.4e-12, Sum P(2) = 4.4e-12
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+T++ + + KE +A+ ET L+ ++E +L T ELK K++E
Sbjct: 489 NTAVSQLTKAKEALIAASET-LKERKAAIRDIEGKLPQTEQELKEKEKE 536
>UNIPROTKB|Q9NTJ3 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IDA;TAS]
[GO:0007076 "mitotic chromosome condensation" evidence=IDA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0005524 "ATP binding"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 EMBL:CH471052
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 KO:K06675 SUPFAM:SSF75553
EMBL:AC024221 OMA:IAIEFLT EMBL:AB019987 EMBL:AL136877 EMBL:AL833949
EMBL:AF092564 IPI:IPI00328298 IPI:IPI00411559 PIR:T46486
RefSeq:NP_001002800.1 RefSeq:NP_005487.3 UniGene:Hs.58992
ProteinModelPortal:Q9NTJ3 SMR:Q9NTJ3 IntAct:Q9NTJ3
MINT:MINT-5005675 STRING:Q9NTJ3 PhosphoSite:Q9NTJ3 DMDM:30173386
PaxDb:Q9NTJ3 PeptideAtlas:Q9NTJ3 PRIDE:Q9NTJ3 DNASU:10051
Ensembl:ENST00000344722 Ensembl:ENST00000357388
Ensembl:ENST00000360111 Ensembl:ENST00000462787 GeneID:10051
KEGG:hsa:10051 UCSC:uc003fdh.3 UCSC:uc010hwd.3 CTD:10051
GeneCards:GC03P160117 HGNC:HGNC:14013 HPA:HPA018259 HPA:HPA029449
MIM:605575 neXtProt:NX_Q9NTJ3 PharmGKB:PA37834 HOGENOM:HOG000184777
HOVERGEN:HBG106696 InParanoid:Q9NTJ3 OrthoDB:EOG4PZJ5V
PhylomeDB:Q9NTJ3 GenomeRNAi:10051 NextBio:37969 ArrayExpress:Q9NTJ3
Bgee:Q9NTJ3 CleanEx:HS_SMC4 Genevestigator:Q9NTJ3
GermOnline:ENSG00000113810 Uniprot:Q9NTJ3
Length = 1288
Score = 529 (191.3 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 130/395 (32%), Positives = 216/395 (54%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERYVNMKN- 64
K+ EE EK T++ L D++ E +L+ A + + LE +Q+ ++ +++ N
Sbjct: 381 KFIEENKEKFTQLDL--EDVQVRE-KLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNN 437
Query: 65 -LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E T+ +E+E + +K+ D ++ L+ EK+ +E ++G F SV
Sbjct: 438 IINETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQK-EKESREKELMG--FSKSVNE 494
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
A+++ D+A+SEL+I+LS + +L + L TL ERK ++ ++P E
Sbjct: 495 ARSKM--DVAQSELDIYLSRHNTAVSQLTKAKEALIAASETLKERKAAIRDIEGKLPQTE 552
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E+ E L LT+EE V L ++V E + S+ +RS +++D ++Q K R+
Sbjct: 553 QELKEKEKELQKLTQEETNFKSLVHDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGRI 612
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLD 303
+KYD+A+S+ C AL+YIV ++++ + + +KRQN+G I LD
Sbjct: 613 PGIYGRLGDLGAIDEKYDVAISSCCHALDYIVVDSIDIAQECVNFLKRQNIGVATFIGLD 672
Query: 304 KMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSG 363
KM + + + +TPEN PRL DL++V+DEKIR AFYFA R+TLVA +L+QA R+ Y
Sbjct: 673 KMAVWAKKMTE-IQTPENTPRLFDLVKVKDEKIRQAFYFALRDTLVADNLDQATRVAYQK 731
Query: 364 GG-YRMVTLEGAIIEPSETLVAQDLNQAK-RIGYS 396
+R+VTL+G IIE S T+ K R+G S
Sbjct: 732 DRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSS 766
Score = 202 (76.2 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 72/228 (31%), Positives = 116/228 (50%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E R EKL RV++VE + ALE E A+ FL LEN + RK N + QY Y K + E
Sbjct: 278 NEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKNHVCQYYIYELQKRIAEM 337
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
ET+ +++ ++ E ++EM++ ++K EKK N I +KF + K +F
Sbjct: 338 ETQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDTEKK---LNKI-TKF---IEENKEKF 390
Query: 129 -ECDIAKSELEIFLSTQSKETKKLA-DLEANLEKVQ---TTLTERKTLCEELTTRVPAME 183
+ D+ ++ L + + KKL L+ + EKV+ + + + E TTR A+E
Sbjct: 391 TQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSNNIINETTTRNNALE 450
Query: 184 SEIAESRARLA---DLTREEAKLLDQVEKLAREVSEKRESMQTSRSNN 228
E + +L D ++E + L Q EK +RE +E M S+S N
Sbjct: 451 KEKEKEEKKLKEVMDSLKQETQGL-QKEKESRE----KELMGFSKSVN 493
Score = 156 (60.0 bits), Expect = 1.7e-23, Sum P(2) = 1.7e-23
Identities = 38/93 (40%), Positives = 62/93 (66%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLVA +L+QA R+ Y +R+VTL+G IIE SGTM+GGGS ++G MG +
Sbjct: 714 DTLVADNLDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMG--------S 765
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
SLV +E+ E+ + +E++L+ S++ M+++ Q
Sbjct: 766 SLV--IEISEEEVNKMESQLQNDSKKAMQIQEQ 796
Score = 54 (24.1 bits), Expect = 2.5e-52, Sum P(2) = 2.5e-52
Identities = 18/67 (26%), Positives = 30/67 (44%)
Query: 464 RKATVSTDTSLVKDLEVK--EKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
R + D+ L + E+K EK + L EL+ L + EV N L ++E+
Sbjct: 932 RNLQKAQDSVLRTEKEIKDTEKEVDDLTAELKSLEDKAAEVVKNTNAAEESLPEIQKEHR 991
Query: 522 TCLIDVK 528
L ++K
Sbjct: 992 NLLQELK 998
Score = 46 (21.3 bits), Expect = 4.6e-12, Sum P(2) = 4.6e-12
Identities = 15/49 (30%), Positives = 28/49 (57%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+T++ + + KE +A+ ET L+ ++E +L T ELK K++E
Sbjct: 514 NTAVSQLTKAKEALIAASET-LKERKAAIRDIEGKLPQTEQELKEKEKE 561
>UNIPROTKB|F1SH51 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:CU466375 RefSeq:XP_001927540.1 UniGene:Ssc.7850
Ensembl:ENSSSCT00000012842 GeneID:100152361 KEGG:ssc:100152361
Uniprot:F1SH51
Length = 1288
Score = 524 (189.5 bits), Expect = 4.1e-52, Sum P(2) = 4.1e-52
Identities = 134/425 (31%), Positives = 229/425 (53%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY-VNMKN 64
K+ EE EK T++ L D++ E +L+ A + + LE +Q+ ++ +++ +N
Sbjct: 381 KFIEENKEKFTKLDL--EDVQVRE-KLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSEN 437
Query: 65 L-GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E T+ +E+E + +K+ D ++ L+ EK+ +E ++G F SV
Sbjct: 438 IITETTTRNNALEKEKEKEEKKLKEVMDSLKQETQGLQK-EKESQEKELMG--FSKSVNE 494
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
A+++ D+A+SEL+I+LS + +L+ + L TL ERK ++ ++P E
Sbjct: 495 ARSKM--DVAQSELDIYLSRYNTAVSQLSKAKDALMAASETLKERKAAIGDIEAKLPQTE 552
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E+ E L LT+EE V L ++V E + S+ +RS +++D ++Q K R+
Sbjct: 553 CELKEKEKELQKLTQEEINFKSLVRDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKTGRI 612
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLD 303
+KYD+A+S+ C AL+YIV ++++ + + +KRQN+G I LD
Sbjct: 613 PGIYGRLGDLGAIDEKYDVAISSCCHALDYIVVDSIDTAQECVNFLKRQNIGVATFIGLD 672
Query: 304 KMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSG 363
KM + + + +TPEN PRL DL++V+DEKIR AFYFA R+TLVA +L+QA R+ Y
Sbjct: 673 KMAVWAKKM-TQIQTPENTPRLFDLVKVKDEKIRQAFYFALRDTLVADNLDQATRVAYQK 731
Query: 364 GG-YRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLN 422
+R+VTL+G IIE S T+ K G G +V + + E+ + +D
Sbjct: 732 DRRWRVVTLQGQIIEQSGTMTGGGSKVMK--GRMGSSV-VVEISEEEVNKMESQLQRDSQ 788
Query: 423 QAKRI 427
+A +I
Sbjct: 789 KAVQI 793
Score = 201 (75.8 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 69/226 (30%), Positives = 116/226 (51%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E R EKL RV++VE + ALE E A+ FL LEN + RK N + QY Y K + E
Sbjct: 278 NEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEM 337
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
ET+ +++ ++ E ++EM++ +K VEKK N I +KF + K +F
Sbjct: 338 ETQKEKIHEDTKEINEKSNILSNEMKAKNKAVKDVEKK---LNKI-TKF---IEENKEKF 390
Query: 129 -ECDIAKSELEIFLSTQSKETKKLA-DLEANLEKVQ---TTLTERKTLCEELTTRVPAME 183
+ D+ ++ L + + KKL L+ + EKV+ + + + + E TTR A+E
Sbjct: 391 TKLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPAKSENIITETTTRNNALE 450
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREV-SEKRESMQTSRSNN 228
E + +L ++ L + + L +E S+++E M S+S N
Sbjct: 451 KEKEKEEKKLKEVMDS---LKQETQGLQKEKESQEKELMGFSKSVN 493
Score = 155 (59.6 bits), Expect = 2.7e-23, Sum P(2) = 2.7e-23
Identities = 41/110 (37%), Positives = 71/110 (64%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLVA +L+QA R+ Y +R+VTL+G IIE SGTM+GGGS ++G MG +
Sbjct: 714 DTLVADNLDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMG--------S 765
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVE---TQLNCTGNELKYKKQE 519
S+V +E+ E+ + +E++L+ SQ+ ++++ QL T +L++ ++E
Sbjct: 766 SVV--VEISEEEVNKMESQLQRDSQKAVQIQEHKVQLEETVVKLRHSERE 813
Score = 57 (25.1 bits), Expect = 4.1e-52, Sum P(2) = 4.1e-52
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+++ EK + L TEL+ L + EV N L ++E+ + L ++K
Sbjct: 946 KEIKDTEKEVDDLTTELKSLEDKAAEVIKNTNAAEESLPEIQKEHRSLLQELK 998
Score = 39 (18.8 bits), Expect = 3.1e-11, Sum P(2) = 3.1e-11
Identities = 14/49 (28%), Positives = 28/49 (57%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+T++ + + K+ +A+ ET L+ ++E +L T ELK K++E
Sbjct: 514 NTAVSQLSKAKDALMAASET-LKERKAAIGDIEAKLPQTECELKEKEKE 561
Score = 37 (18.1 bits), Expect = 5.2e-50, Sum P(2) = 5.2e-50
Identities = 8/47 (17%), Positives = 28/47 (59%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
SL+++L+V ++ +L+ + + + +++ + +++KY ++E
Sbjct: 992 SLLQELKVIQENEHALQKDALSIKLKLEQIDGHIGEHNSKIKYWQKE 1038
>UNIPROTKB|E2RCX4 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
CTD:10051 EMBL:AAEX03017331 RefSeq:XP_535848.2
Ensembl:ENSCAFT00000022729 GeneID:478679 KEGG:cfa:478679
Uniprot:E2RCX4
Length = 1288
Score = 534 (193.0 bits), Expect = 1.7e-51, Sum P(2) = 1.7e-51
Identities = 130/394 (32%), Positives = 217/394 (55%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV--NMKN 64
K+ EE +K T++ L D++ E + +LE +Q+ ++ +++ + K
Sbjct: 381 KFIEENKQKFTQLDL--EDVQVREKLKHASSKAKKLEKQLQKDKEKVEEFKSIPAKSEKI 438
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
+ E T+ +E+E + +K+ D ++ L+ EK+ +E ++G F SV A
Sbjct: 439 ITEMTTRNSALEKEKEKEEKKLKEVMDSLKQETQGLQR-EKESREKELMG--FSKSVNEA 495
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+++ D+A+SEL+I+LS + +L + L TL ERK ++ ++P E
Sbjct: 496 RSKM--DVAQSELDIYLSRHNTAVSQLNKAKEALIAASETLKERKAAIRDIEAKLPQSEL 553
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVS 244
E+ E L +LT+EE KL V L ++V E + S+ +RS +++D ++Q K R+
Sbjct: 554 ELKEKEKELQELTQEEIKLKGLVRDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGRIP 613
Query: 245 XXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDK 304
+KYD+A+S+ C AL+YIV ++++ + + +KRQN+G I LDK
Sbjct: 614 GIYGRLGDLGAIDEKYDVAISSCCHALDYIVVDSIDTAQDCVNFLKRQNIGVATFIGLDK 673
Query: 305 MQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSGG 364
M + ++ K +TPEN PRL DL++V+DEKIR AFYFA R+TLVA +L+QA R+ Y
Sbjct: 674 MAVWANKM-TKIQTPENTPRLFDLVKVKDEKIRQAFYFALRDTLVADNLDQATRVAYQKD 732
Query: 365 G-YRMVTLEGAIIEPSETLVAQDLNQAK-RIGYS 396
+R+VTL+G IIE S T+ K R+G S
Sbjct: 733 RRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMGSS 766
Score = 211 (79.3 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 72/226 (31%), Positives = 116/226 (51%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E R EKL RV+LVE + ALE E A+ FL LEN + RK N + QY Y K + E
Sbjct: 278 NEHRGEKLNRVKLVEKEKDALEGEKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEM 337
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
ET+ +++ ++ E ++EM++ +K VEKK N I +KF + K +F
Sbjct: 338 ETQKEKIHEDTKEINEKSSILSNEMKAKNKAVKDVEKK---LNKI-TKF---IEENKQKF 390
Query: 129 -ECDIAKSELEIFLSTQSKETKKLA-DLEANLEKVQ---TTLTERKTLCEELTTRVPAME 183
+ D+ ++ L S + KKL L+ + EKV+ + + + + E+TTR A+E
Sbjct: 391 TQLDLEDVQVREKLKHASSKAKKLEKQLQKDKEKVEEFKSIPAKSEKIITEMTTRNSALE 450
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREV-SEKRESMQTSRSNN 228
E + +L ++ L + + L RE S ++E M S+S N
Sbjct: 451 KEKEKEEKKLKEVMDS---LKQETQGLQREKESREKELMGFSKSVN 493
Score = 152 (58.6 bits), Expect = 4.3e-24, Sum P(2) = 4.3e-24
Identities = 37/93 (39%), Positives = 62/93 (66%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLVA +L+QA R+ Y +R+VTL+G IIE SGTM+GGGS ++G MG +
Sbjct: 714 DTLVADNLDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMG--------S 765
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
S+V +E+ E+ + +E++L+ SQ+ ++++ Q
Sbjct: 766 SVV--VEISEEEVNRMESQLQRDSQKALQIQEQ 796
Score = 41 (19.5 bits), Expect = 1.7e-51, Sum P(2) = 1.7e-51
Identities = 15/67 (22%), Positives = 28/67 (41%)
Query: 464 RKATVSTDTSLVKDLEVK--EKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
R + D+ + E+K EK + L EL+ + + EV L ++E+
Sbjct: 932 RNLKKAQDSVFRTEEEIKDTEKEVKDLTAELKSVEDKAAEVYQNTTAAEESLPEIQKEHR 991
Query: 522 TCLIDVK 528
L ++K
Sbjct: 992 NLLQELK 998
Score = 41 (19.5 bits), Expect = 1.6e-12, Sum P(2) = 1.6e-12
Identities = 16/53 (30%), Positives = 28/53 (52%)
Query: 468 VSTDTSLVKDL-EVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+S + V L + KE +A+ ET L+ ++E +L + ELK K++E
Sbjct: 510 LSRHNTAVSQLNKAKEALIAASET-LKERKAAIRDIEAKLPQSELELKEKEKE 561
>UNIPROTKB|E1BMZ9 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0051383 "kinetochore organization" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045132
"meiotic chromosome segregation" evidence=IEA] [GO:0010032 "meiotic
chromosome condensation" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0000796 "condensin complex" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 GO:GO:0000796 GO:GO:0007062
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 OMA:IAIEFLT
EMBL:DAAA02002417 EMBL:DAAA02002418 IPI:IPI00703154
Ensembl:ENSBTAT00000007705 ArrayExpress:E1BMZ9 Uniprot:E1BMZ9
Length = 1288
Score = 516 (186.7 bits), Expect = 7.8e-51, Sum P(2) = 7.8e-51
Identities = 133/425 (31%), Positives = 224/425 (52%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY-VNMKN 64
K+ EE EK T++ L D++ E +L+ A + + LE +Q+ ++ +++ +N
Sbjct: 381 KFIEENKEKFTKLDL--EDVQVRE-KLKHATSKAKKLEKQLQKDKEKVEEFKSIPTKSEN 437
Query: 65 L-GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E TK +E+E E +K+ D ++ +L+ EK+ +E ++ F SV
Sbjct: 438 IIRETTTKNNALEKEKEKEEEKLKEVMDSLKQETQDLQK-EKESREKELMD--FSKSVNE 494
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
A+++ D+A+SEL+I+L + +L + L TL ERK ++ ++P E
Sbjct: 495 ARSKM--DVAQSELDIYLRRHNTAVSQLGKAKEALMAASETLKERKAAIGDIEAKLPQTE 552
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E+ E L LT+EE V L ++V E + S+ +RS +++D ++Q K R+
Sbjct: 553 HELKEKEKELQKLTQEEINFKSLVRDLFQKVEEAKSSLAMNRSRGKVLDAIIQEKKSGRI 612
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLD 303
+KYD+A+S+ C AL+YIV ++++ + + +KRQN+G I LD
Sbjct: 613 PGIYGRLGDLGTIDEKYDVAISSCCHALDYIVVDSIDTAQECVNFLKRQNIGVATFIGLD 672
Query: 304 KMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSG 363
KM + + K +TPEN PRL DL++V+D IR AFYFA R+TLVA L+QA R+ Y
Sbjct: 673 KMAVWAKKM-TKIQTPENTPRLFDLVKVKDGAIRQAFYFALRDTLVADSLDQATRVAYQK 731
Query: 364 GG-YRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLN 422
+R+VTL+G IIE S T+ K G G +V + + E+ + +D
Sbjct: 732 DRRWRVVTLQGQIIEQSGTMTGGGSKVMK--GRMGSSV-VVEISEEEVNKMESQLQRDSQ 788
Query: 423 QAKRI 427
+A +I
Sbjct: 789 KAVQI 793
Score = 206 (77.6 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 73/228 (32%), Positives = 118/228 (51%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E R EKL RV++VE + ALE E A+ FL LEN + RK N + QY Y K + E
Sbjct: 278 NEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKNHVCQYYIYDLQKRIAEM 337
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
ET+ +++ ++ E ++EM++ +K VEKK N I +KF + K +F
Sbjct: 338 ETQKEKINEDTKEINEKSNILSNEMKAKNKAVKDVEKK---LNKI-TKF---IEENKEKF 390
Query: 129 -ECDIAKSELEIFLSTQSKETKKLA-DLEANLEKVQ---TTLTERKTLCEELTTRVPAME 183
+ D+ ++ L + + KKL L+ + EKV+ + T+ + + E TT+ A+E
Sbjct: 391 TKLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKVEEFKSIPTKSENIIRETTTKNNALE 450
Query: 184 SEIAESRARLA---DLTREEAKLLDQVEKLAREVSEKRESMQTSRSNN 228
E + +L D ++E + L Q EK +RE +E M S+S N
Sbjct: 451 KEKEKEEEKLKEVMDSLKQETQDL-QKEKESRE----KELMDFSKSVN 493
Score = 151 (58.2 bits), Expect = 2.0e-23, Sum P(2) = 2.0e-23
Identities = 37/93 (39%), Positives = 61/93 (65%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLVA L+QA R+ Y +R+VTL+G IIE SGTM+GGGS ++G MG +
Sbjct: 714 DTLVADSLDQATRVAYQKDRRWRVVTLQGQIIEQSGTMTGGGSKVMKGRMG--------S 765
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
S+V +E+ E+ + +E++L+ SQ+ ++++ Q
Sbjct: 766 SVV--VEISEEEVNKMESQLQRDSQKAVQIQEQ 796
Score = 53 (23.7 bits), Expect = 7.8e-51, Sum P(2) = 7.8e-51
Identities = 19/67 (28%), Positives = 30/67 (44%)
Query: 464 RKATVSTDTSLVKDLEVK--EKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
R + D L + E+K EK + L TEL+ L + EV N L ++E+
Sbjct: 932 RNLKKAQDNVLRTEKEIKDTEKEVDDLTTELKSLEDKAAEVVKNTNDAEASLPEIQKEHR 991
Query: 522 TCLIDVK 528
L ++K
Sbjct: 992 NLLQELK 998
Score = 45 (20.9 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 14/41 (34%), Positives = 24/41 (58%)
Query: 479 EVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+ KE +A+ ET L+ ++E +L T +ELK K++E
Sbjct: 522 KAKEALMAASET-LKERKAAIGDIEAKLPQTEHELKEKEKE 561
>UNIPROTKB|P50532 [details] [associations]
symbol:smc4 "Structural maintenance of chromosomes protein
4" species:8355 "Xenopus laevis" [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0006281 GO:GO:0006310
GO:GO:0046982 GO:GO:0007076 GO:GO:0007062 KO:K06675 SUPFAM:SSF75553
CTD:10051 HOVERGEN:HBG106696 EMBL:U13673 PIR:A55094
RefSeq:NP_001081371.1 UniGene:Xl.927 ProteinModelPortal:P50532
IntAct:P50532 GeneID:397799 KEGG:xla:397799 Xenbase:XB-GENE-5865892
Uniprot:P50532
Length = 1290
Score = 525 (189.9 bits), Expect = 3.0e-49, P = 3.0e-49
Identities = 127/424 (29%), Positives = 226/424 (53%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV--NMKN 64
K+ EE EK T++ L + D + + V +L+ +Q+ ++ + + + K
Sbjct: 375 KFIEENREKFTQLDLQDVDTREKLKHSKSKVK--KLQKQLQKDKEKVDELKNVPANSQKI 432
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
+ E K +E++ E +K D ++ L+ EK+ KE ++ + +V A
Sbjct: 433 IAEETNKKDLLEKQKEKEEEKLKNVMDSLKKETQGLQE-EKEVKEKELM--EISKTVNEA 489
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+++ D+A+SEL+I+LS + +L + L TL ER+ +EL T++P E
Sbjct: 490 RSKM--DVAQSELDIYLSRHNSALSQLNKAKEALNTASATLKERRAAIKELETKLPKDEG 547
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVS 244
++ + L L EE + +QV +L ++V E R S+ +RS +++D ++Q K ++
Sbjct: 548 DLKKREKELESLVSEEGNIKNQVRELRQKVEEARSSLSANRSRGKVLDALIQQKKSGKIP 607
Query: 245 XXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDK 304
+KYD+A+S++CGAL++IV +T++ + + +K+QNVG I LDK
Sbjct: 608 GIFGRLGDLGAIDEKYDVAISSSCGALDHIVVDTIDTAQECVNFLKKQNVGVATFIGLDK 667
Query: 305 MQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSGG 364
M+ + +K +TPEN+PRL D+++V+DE+I+ AFYFA R+T+VA +L+QA R+ +
Sbjct: 668 MKVWEKGL-NKIQTPENIPRLFDMVKVKDEQIKPAFYFALRDTIVANNLDQATRVAFQKD 726
Query: 365 G-YRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQ 423
+R+VTL+G IIE S T+ K G G MV + ++ E + D +
Sbjct: 727 KRWRVVTLQGQIIEQSGTMTGGGGKVMK--GRMGSSV-MVEISDDQLQKMENKLKTDTTR 783
Query: 424 AKRI 427
A I
Sbjct: 784 ATEI 787
Score = 183 (69.5 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 58/227 (25%), Positives = 114/227 (50%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E+R EKL RV++VE + ALE E KA+ FL +EN +K N++ QY + K +
Sbjct: 272 NEQRGEKLNRVKMVEKEKDALEGEKNKAIEFLTVENETFKKKNQLCQYYIHDLQKRSRDK 331
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKK-GKESNVIGS---KF-RWSVFS 123
E + ++++++ E + M+ LK VEK+ K + I KF + +
Sbjct: 332 EAQKEKIQEDTKDISEKSNTLLETMKEKNKALKDVEKQLNKITKFIEENREKFTQLDLQD 391
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLE---ANLEKVQTTLTERKTLCEELTTRVP 180
TR + +KS+++ K+ +K+ +L+ AN +K+ T +K L E+ +
Sbjct: 392 VDTREKLKHSKSKVKKLQKQLQKDKEKVDELKNVPANSQKIIAEETNKKDLLEKQKEKEE 451
Query: 181 AMESEIAESRARLADLTREEAKLLD-QVEKLAREVSEKRESMQTSRS 226
+ +S + +EE ++ + ++ ++++ V+E R M ++S
Sbjct: 452 EKLKNVMDSLKKETQGLQEEKEVKEKELMEISKTVNEARSKMDVAQS 498
Score = 148 (57.2 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 37/112 (33%), Positives = 59/112 (52%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+T+VA +L+QA R+ + +R+VTL+G IIE SGTM+GGG ++G MG V
Sbjct: 708 DTIVANNLDQATRVAFQKDKRWRVVTLQGQIIEQSGTMTGGGGKVMKGRMGSSVMVEISD 767
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
++ +E K K + TE++ E +L E+K ++Y L
Sbjct: 768 DQLQKMENKLKTDTTRATEIQDRKAHLEEEVAKLRQATREMKNTFEKYTASL 819
Score = 70 (29.7 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 37/169 (21%), Positives = 76/169 (44%)
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIGSKFRWSVFS 123
GE +V+ +E+E A LE K E + ++E T +KK + + + + R
Sbjct: 276 GEKLNRVKMVEKEKDA-LEGEKNKAIEFLTVENE--TFKKKNQLCQYYIHDLQKRSRDKE 332
Query: 124 A-KTRFECDIAK-SELE-IFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVP 180
A K + + D SE L T ++ K L D+E L K+ + E + +L +
Sbjct: 333 AQKEKIQEDTKDISEKSNTLLETMKEKNKALKDVEKQLNKITKFIEENREKFTQLDLQDV 392
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNR 229
++ S++++ L ++ K ++V++L + V + + +N +
Sbjct: 393 DTREKLKHSKSKVKKLQKQLQKDKEKVDEL-KNVPANSQKIIAEETNKK 440
Score = 53 (23.7 bits), Expect = 6.2e-07, Sum P(2) = 6.2e-07
Identities = 44/227 (19%), Positives = 99/227 (43%)
Query: 35 KAVNFLELENCVQRKHNEIY----QYERYVNMKNLG--EH-ETKVQQME-----QELTAN 82
K V L + + HN + E+ MK G EH E ++ +E + L
Sbjct: 201 KDVGLLLRSHGIDLDHNRFLILQGEVEQIAMMKPKGQTEHDEGMLEYLEDIIGSERLKEP 260
Query: 83 LESIKKCTDEMESAKSE-LKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSEL-EIF 140
++ + + + + + E L V+ KE + + + ++ E K++L + +
Sbjct: 261 IQILCRRVELLNEQRGEKLNRVKMVEKEKDALEGEKNKAIEFLTVENETFKKKNQLCQYY 320
Query: 141 LSTQSKETKKLADLEANLEKVQTT---LTERK-TLCEELTTRVPAMESEIAESRARLADL 196
+ K ++ D EA EK+Q ++E+ TL E + + A++ ++ + ++
Sbjct: 321 IHDLQKRSR---DKEAQKEKIQEDTKDISEKSNTLLETMKEKNKALK-DVEKQLNKITKF 376
Query: 197 TREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E + Q++ ++V + RE ++ S+S + + +Q K + +V
Sbjct: 377 IEENREKFTQLD--LQDV-DTREKLKHSKSKVKKLQKQLQ-KDKEKV 419
Score = 45 (20.9 bits), Expect = 6.9e-10, Sum P(2) = 6.9e-10
Identities = 16/50 (32%), Positives = 26/50 (52%)
Query: 461 LMGRKATVST-DTSLVKD---LEVKEKRLASLETELRILSQQKMEVETQL 506
L R+A + +T L KD L+ +EK L SL +E + Q E+ ++
Sbjct: 528 LKERRAAIKELETKLPKDEGDLKKREKELESLVSEEGNIKNQVRELRQKV 577
Score = 37 (18.1 bits), Expect = 4.6e-09, Sum P(2) = 4.6e-09
Identities = 12/55 (21%), Positives = 26/55 (47%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
+S S + L ++ L + L+ E+ET+L +LK +++E ++
Sbjct: 504 LSRHNSALSQLNKAKEALNTASATLKERRAAIKELETKLPKDEGDLKKREKELES 558
>SGD|S000004076 [details] [associations]
symbol:SMC4 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0007076 "mitotic chromosome
condensation" evidence=IMP;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IGI;IDA]
[GO:0000070 "mitotic sister chromatid segregation" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0000799 "nuclear condensin complex" evidence=TAS;IPI]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0070058
"tRNA gene clustering" evidence=IMP] [GO:0032116 "SMC loading
complex" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
SGD:S000004076 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0051301 GO:GO:0006281 GO:GO:0003682 EMBL:BK006945
GO:GO:0016887 GO:GO:0006310 GO:GO:0007076 EMBL:U53880 GO:GO:0000799
GO:GO:0070058 EMBL:Z73259 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 OMA:IAIEFLT
HOGENOM:HOG000184777 OrthoDB:EOG4WM82V EMBL:Z73258 PIR:S64918
RefSeq:NP_013187.1 ProteinModelPortal:Q12267 SMR:Q12267
DIP:DIP-3007N IntAct:Q12267 MINT:MINT-436885 STRING:Q12267
PaxDb:Q12267 EnsemblFungi:YLR086W GeneID:850775 KEGG:sce:YLR086W
CYGD:YLR086w NextBio:966951 Genevestigator:Q12267
GermOnline:YLR086W Uniprot:Q12267
Length = 1418
Score = 339 (124.4 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 98/379 (25%), Positives = 190/379 (50%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERYVN--MKNLG 66
+E+T L R +L T + +LE + V+ +E E ++ + I + E +
Sbjct: 455 KEKTLVLERRELEGTRV-SLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQT 513
Query: 67 EHETKVQQMEQELTANLESIKKCTDEME-SAKSELKTVEKKG-KESNVIGSKFRWSVFSA 124
EHET+++ +LT LE + D+++ S K + K + + + + W +
Sbjct: 514 EHETEIK----DLTQLLEKERSILDDIKLSLKDKTKNISAEIIRHEKELEP---WDLQLQ 566
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+ + +A+SEL + TQ+K K + LE + +T E + L +L ++ +++
Sbjct: 567 EKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKD 626
Query: 185 EIAESRARLADLTREEAKLLDQVEKLARE-VSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E ++ + K + +V R+ E R S+ +++ ++++ + +L+ R+
Sbjct: 627 ERSQGEKNFTS-AHLKLKEMQKVLNAHRQRAMEARSSLSKAQNKSKVLTALSRLQKSGRI 685
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLD 303
+ +D+A+STAC L+ +V +TVE + I +++ +G I LD
Sbjct: 686 NGFHGRLGDLGVIDDSFDVAISTACPRLDDVVVDTVECAQHCIDYLRKNKLGYARFILLD 745
Query: 304 KMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSG 363
+++Q++ Q TPENVPRL DL++ ++ K AFY R+TLVAQ+L QA + Y
Sbjct: 746 RLRQFNLQ---PISTPENVPRLFDLVKPKNPKFSNAFYSVLRDTLVAQNLKQANNVAYGK 802
Query: 364 GGYRMVTLEGAIIEPSETL 382
+R+VT++G +I+ S T+
Sbjct: 803 KRFRVVTVDGKLIDISGTM 821
Score = 160 (61.4 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 35/95 (36%), Positives = 57/95 (60%)
Query: 414 ETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLM--GRKATVSTD 471
+TLVAQ+L QA + Y +R+VT++G +I+ SGTMSGGG++ +GLM G + D
Sbjct: 785 DTLVAQNLKQANNVAYGKKRFRVVTVDGKLIDISGTMSGGGNHVAKGLMKLGTNQSDKVD 844
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQL 506
++++ E+ L+ E R+ S E+E +L
Sbjct: 845 DYTPEEVDKIERELSERENNFRVASDTVHEMEEEL 879
Score = 124 (48.7 bits), Expect = 1.8e-15, Sum P(2) = 1.8e-15
Identities = 52/232 (22%), Positives = 103/232 (44%)
Query: 14 EKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQ 73
EK R ++V+ + +LE A+ FLE E + ++++Q+ K+
Sbjct: 356 EKENRFEIVDREKNSLESGKETALEFLEKEKQLTLLRSKLFQF--------------KLL 401
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIA 133
Q +L + LE I ++E K + + KK E + + + S ++ + +
Sbjct: 402 QSNSKLASTLEKISSSNKDLEDEKMKFQESLKKVDEIKAQRKEIKDRISSCSSKEKTLVL 461
Query: 134 -KSELE---IFLSTQSKE-TKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAE 188
+ ELE + L ++K K+ E L+ + +++E + + EEL + E+EI +
Sbjct: 462 ERRELEGTRVSLEERTKNLVSKMEKAEKTLKSTKHSISEAENMLEELRGQQTEHETEIKD 521
Query: 189 SRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSE 240
L L +E +LD + KL+ + K S + R L + +QL+ +
Sbjct: 522 ----LTQLLEKERSILDDI-KLSLKDKTKNISAEIIRHEKELEPWDLQLQEK 568
Score = 68 (29.0 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 30/113 (26%), Positives = 57/113 (50%)
Query: 8 YDEERTEKLTRVQLVETDLKALEP---ELRKAVNFLELENCVQRKHNEIYQYERYVNMKN 64
+D + EK +++QL E++L LE +L+K V LE + ++ H + Q + +++K
Sbjct: 561 WDLQLQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQ-DLILDLKK 619
Query: 65 -LGEHETKVQQMEQELTA---NLESIKKCTDE-----MESAKSELKTVEKKGK 108
L + + Q E+ T+ L+ ++K + ME A+S L + K K
Sbjct: 620 KLNSLKDERSQGEKNFTSAHLKLKEMQKVLNAHRQRAME-ARSSLSKAQNKSK 671
Score = 53 (23.7 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 13/54 (24%), Positives = 29/54 (53%)
Query: 478 LEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL---KYKKQEYDTCLIDVK 528
L+ KE ++ E+EL +L + + +++ + ++ K KQE ++D+K
Sbjct: 565 LQEKESQIQLAESELSLLEETQAKLKKNVETLEEKILAKKTHKQELQDLILDLK 618
Score = 48 (22.0 bits), Expect = 8.0e-28, Sum P(2) = 8.0e-28
Identities = 17/89 (19%), Positives = 42/89 (47%)
Query: 444 IEPSGTMSGGGSNPIRGLMG---RKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKM 500
++ + SGG + L+ R +S+D V + ++K +LA E + + + +
Sbjct: 998 VKSASKKSGGDVVKFQKLLQNSERDVELSSDELKVIEEQLKHTKLALAENDTNM--NETL 1055
Query: 501 EVETQLNCTGNELKYKKQEYDTCLIDVKS 529
++ +L +LK + ++ + + + KS
Sbjct: 1056 NLKVELKEQSEQLKEQMEDMEESINEFKS 1084
Score = 48 (22.0 bits), Expect = 1.3e-07, Sum P(2) = 1.3e-07
Identities = 29/122 (23%), Positives = 50/122 (40%)
Query: 132 IAKSELEIFLSTQSKETKKLAD-LEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESR 190
I + E+E + K K+ D L LE + T K L EE ++ + E
Sbjct: 300 ILQGEVENIAQMKPKAEKESDDGLLEYLEDIIGT-ANYKPLIEERMGQIENLNEVCLEKE 358
Query: 191 ARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRS----------NNRLIDFVMQLKSE 240
R + RE+ L + ++ A E EK + + RS N++L + ++ S
Sbjct: 359 NRFEIVDREKNSL-ESGKETALEFLEKEKQLTLLRSKLFQFKLLQSNSKLASTLEKISSS 417
Query: 241 NR 242
N+
Sbjct: 418 NK 419
Score = 48 (22.0 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 11/59 (18%), Positives = 31/59 (52%)
Query: 470 TDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
T L K++E E+++ + +T + L ++++ +LN +E ++ + + + +K
Sbjct: 585 TQAKLKKNVETLEEKILAKKTHKQELQDLILDLKKKLNSLKDERSQGEKNFTSAHLKLK 643
Score = 40 (19.1 bits), Expect = 5.5e-27, Sum P(2) = 5.5e-27
Identities = 10/45 (22%), Positives = 23/45 (51%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
VK+ E+ + S + +L ++ + + + N +E K KK++
Sbjct: 914 VKEAEMAYVKAVSDKAQLNVVMKNLERLRGEYNDLQSETKTKKEK 958
>ASPGD|ASPL0000075987 [details] [associations]
symbol:AN4597 species:162425 "Emericella nidulans"
[GO:0003917 "DNA topoisomerase type I activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006265 "DNA
topological change" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000939
"condensed chromosome inner kinetochore" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:BN001303
EMBL:AACD01000079 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 OrthoDB:EOG4WM82V
RefSeq:XP_662201.1 ProteinModelPortal:Q5B4D3 STRING:Q5B4D3
EnsemblFungi:CADANIAT00005839 GeneID:2872396 KEGG:ani:AN4597.2
Uniprot:Q5B4D3
Length = 1476
Score = 418 (152.2 bits), Expect = 1.0e-37, P = 1.0e-37
Identities = 137/523 (26%), Positives = 249/523 (47%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENC--VQRKHNEIYQYERYVNMKN 64
KYD+E + + + + K LE + A L C + ++H+E + + K
Sbjct: 555 KYDKETVKFEEKKKFLVGKQKKLEKAMTSAR--LAASECQSLVKRHSEAIENKS----KE 608
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
++E +V+ EQELT ES+K T + S+ ++K E W
Sbjct: 609 TADYENEVEHEEQELTKIRESLKGKTQGL----SDQIAAKQKSLEP--------WDEKIN 656
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
K + E +A+SEL+I + L + ++ + ++ T+ ++ +E T+ +E
Sbjct: 657 KKQSELAVAQSELDILKEKSNAGAVLLEEAQSKITSIEETIARKEEDLQECKTQRSTLED 716
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVS 244
E+ + + L + +E + V ++ E R ++ ++++ ++ +M+LK R+
Sbjct: 717 EVEQLQHDLKKYSMKEPDVRAHVSNARQKAEEARATVASTQNRGSVLTGLMRLKESGRIE 776
Query: 245 XXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDK 304
+KYD+A+STAC AL +V +TVE G+ I +++ N+GR N I LD+
Sbjct: 777 GFHGRLGNLGTIDEKYDVAISTACPALENMVVDTVEVGQQCIDYLRKNNLGRANFILLDR 836
Query: 305 MQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSGG 364
+ + + +K TP+NVPRL DL++ +D K AFY + TLVA+DL+QA RI Y
Sbjct: 837 LPK---RDLNKILTPDNVPRLFDLVKPKDPKFAPAFYSVMQNTLVARDLDQANRIAYGAR 893
Query: 365 GYRMVTLEGAIIEPSETL------VAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETLVA 418
+R+VTL+G +I+ S T+ VA+ +K++G ++V +E + E E
Sbjct: 894 RWRVVTLDGQLIDTSGTMSGGGTRVARGAMSSKQVG-DITKEQLVQMESDL-EEMERKYQ 951
Query: 419 QDLNQAKRIGYSGGGY-----RMVT-LEGAIIE-PSGTMS-GGGSNPIRGLMGRKATVST 470
+ +R+ + R T ++ +IE S S ++ L T
Sbjct: 952 HFQEKQRRVESALREKTEEIPRAETKIQKIMIEIDSAKRSLADAERRVQELSAAHKPSKT 1011
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
D S VK V E+++ LE ++ L QK +E ++ N++
Sbjct: 1012 DASRVK---VLEEQIVGLEEQIEDLRSQKGGIEEEIQALQNKI 1051
>POMBASE|SPBC146.03c [details] [associations]
symbol:cut3 "condensin complex subunit Cut3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IMP] [GO:0034613
"cellular protein localization" evidence=IMP] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBC146.03c Pfam:PF02463 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0034613 GO:GO:0051301
EMBL:CU329671 GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062 KO:K06675
SUPFAM:SSF75553 OMA:IAIEFLT HOGENOM:HOG000184777 EMBL:D30788
EMBL:AB027959 PIR:S51622 RefSeq:NP_595392.1
ProteinModelPortal:P41004 DIP:DIP-35048N IntAct:P41004
STRING:P41004 EnsemblFungi:SPBC146.03c.1 GeneID:2539817
KEGG:spo:SPBC146.03c OrthoDB:EOG4WM82V NextBio:20800966
Uniprot:P41004
Length = 1324
Score = 341 (125.1 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 104/393 (26%), Positives = 200/393 (50%)
Query: 13 TEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKV 72
+EK TR Q E +E +L+ FL + +K E +E+ +L H+
Sbjct: 423 SEKKTR-QSYEQQTVKIEEQLK----FLLNKEKKLKKSIEALSFEKSEAENSLSSHDIDS 477
Query: 73 QQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKE-SNVIGSKFRWSVFSAKTRF--- 128
Q++ E+ A+L S++ +E+ S K+++ K + SN I K + ++ A +
Sbjct: 478 QKLNSEI-ADL-SLRLQQEEL-SLDDIRKSLQGKTEGISNAIEEKQK-AMAPALEKINQL 533
Query: 129 --ECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEI 186
E I + EL++ L+ ++ + +++L+K++ E + + L++++ +
Sbjct: 534 TSEKQILQVELDMLLNKENDLINDVESSQSSLDKLRNDAEENRNI---LSSKLKVLSDLK 590
Query: 187 AESRARLADLTREEAKLLDQVEKLAR---EVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E + ++ R++ + + L ++ E + S+ +SRS +++ + +L + +
Sbjct: 591 GEKKDVSKNIERKKETVHNTYRNLMSNRTKLEEMKASLSSSRSRGNVLESLQRLHESDNL 650
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLD 303
+ + YD+A+STAC ALN+IV + +E G+ +A ++ N+GR + I L
Sbjct: 651 NGFFGRLGDLATIDEAYDVAISTACPALNHIVVDNIETGQKCVAFLRSNNLGRASFIILK 710
Query: 304 KMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSG 363
++ Q + + +TPENVPRL DL++ D+K AFY + TLVA++L QA RI Y
Sbjct: 711 ELAQKNLA---RIQTPENVPRLFDLLRFNDQKFAPAFYNVLQNTLVAKNLEQANRIAYGK 767
Query: 364 GGYRMVTLEGAIIEPSETLVAQDLNQAKRIGYS 396
+R+VTL G +I+ S T+ + K+ G S
Sbjct: 768 TRWRVVTLSGQLIDKSGTMTGGG-TRVKKGGMS 799
Score = 147 (56.8 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 39/116 (33%), Positives = 62/116 (53%)
Query: 415 TLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSL 474
TLVA++L QA RI Y +R+VTL G +I+ SGTM+GGG+ +G M T +
Sbjct: 751 TLVAKNLEQANRIAYGKTRWRVVTLSGQLIDKSGTMTGGGTRVKKGGMSSAITSDVSPAS 810
Query: 475 V----KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLID 526
V K +++++ R +EL L+Q+ E+ ++ EL+ K + D D
Sbjct: 811 VETCDKQVQLEDTRYRQHLSELESLNQRFTEISERIPSA--ELEISKLQLDVSACD 864
Score = 136 (52.9 bits), Expect = 2.2e-15, Sum P(2) = 2.2e-15
Identities = 53/240 (22%), Positives = 114/240 (47%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV--NMKNLG 66
D+ EK +R++LV ++ LE ++FL+ EN + K N++Y+ Y N K L
Sbjct: 316 DDICAEKESRLKLVLSEKAKLEDSKNSVLSFLKDENELFMKQNQLYRTILYETRNKKTLV 375
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTV-EKKGKESNVIGSKFRWSVFSAK 125
++ + +E +L A+LE ++ ++ E+K++ EK K N S+ + +
Sbjct: 376 QN--LLNSLEGKLQAHLEKFEQTERDISEKNEEVKSLREKAAKVKNDCTSEKK-----TR 428
Query: 126 TRFECDIAKSELEI-FLSTQSKETKKLAD-LEANLEKVQTTLTERKTLCEELTTRVPAME 183
+E K E ++ FL + K+ KK + L + + +L+ ++L + + +
Sbjct: 429 QSYEQQTVKIEEQLKFLLNKEKKLKKSIEALSFEKSEAENSLSSHDIDSQKLNSEIADLS 488
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
+ + L D+ + L + E ++ + EK+++M + ++ + QL SE ++
Sbjct: 489 LRLQQEELSLDDIRKS---LQGKTEGISNAIEEKQKAMAPA------LEKINQLTSEKQI 539
Score = 86 (35.3 bits), Expect = 2.9e-05, Sum P(3) = 2.9e-05
Identities = 38/188 (20%), Positives = 76/188 (40%)
Query: 61 NMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWS 120
NM+ L + + E L L K D S S LK + + N + +
Sbjct: 308 NMQELSNSDDICAEKESRLKLVLSEKAKLEDSKNSVLSFLKDENELFMKQNQLYRTILYE 367
Query: 121 VFSAKTRFE--CDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLC-EELTT 177
+ KT + + + +L+ L + + +++ ++ ++ + K C E T
Sbjct: 368 TRNKKTLVQNLLNSLEGKLQAHLEKFEQTERDISEKNEEVKSLREKAAKVKNDCTSEKKT 427
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQT-----SRSNNRLID 232
R + E + + +L L +E KL +E L+ E SE S+ + + N+ + D
Sbjct: 428 R-QSYEQQTVKIEEQLKFLLNKEKKLKKSIEALSFEKSEAENSLSSHDIDSQKLNSEIAD 486
Query: 233 FVMQLKSE 240
++L+ E
Sbjct: 487 LSLRLQQE 494
Score = 85 (35.0 bits), Expect = 1.4e-10, Sum P(3) = 1.4e-10
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 381 TLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRIGYS 430
TLVA++L QA RI Y +R+VTL G +I+ S T+ + K+ G S
Sbjct: 751 TLVAKNLEQANRIAYGKTRWRVVTLSGQLIDKSGTMTGGG-TRVKKGGMS 799
Score = 61 (26.5 bits), Expect = 1.6e-29, Sum P(2) = 1.6e-29
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 469 STDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGN-ELKYKK 517
S+ LVK +E + K++ S++ E L Q E T L+ GN E KY K
Sbjct: 1023 SSIDELVKFIEFESKQMNSVKAERIELENQIQEQRTALSEVGNNENKYLK 1072
Score = 49 (22.3 bits), Expect = 2.8e-28, Sum P(2) = 2.8e-28
Identities = 17/67 (25%), Positives = 36/67 (53%)
Query: 469 STDTS-LVKDLEVKEKRLASLETELRILSQQKM---EVETQLNCTGNELKYKKQEYDTCL 524
S D S LV ++ V +K+ E ++ +LS+ + E E + + +EL+ K+ + +
Sbjct: 1105 SVDKSELVSNISVLKKKTEDREVDINVLSEYRRCNKEAEKRDSDYQSELQ-KRTDLKKVV 1163
Query: 525 IDVKSPK 531
D++S +
Sbjct: 1164 TDLQSQR 1170
Score = 42 (19.8 bits), Expect = 1.5e-27, Sum P(2) = 1.5e-27
Identities = 11/42 (26%), Positives = 25/42 (59%)
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
++L + + + +A+L+TEL+ L++ E +++L N L
Sbjct: 977 SNLTSEYDTTTESIATLKTELQSLNKYVDEHKSRLREFENAL 1018
>DICTYBASE|DDB_G0286403 [details] [associations]
symbol:smc4 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISS]
[GO:0007076 "mitotic chromosome condensation" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000796 "condensin complex" evidence=ISS] [GO:0000070 "mitotic
sister chromatid segregation" evidence=ISS] [GO:0051301 "cell
division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0286403 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0046982 EMBL:AAFI02000085 GO:GO:0007076
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 HSSP:P32908 RefSeq:XP_637730.1
ProteinModelPortal:Q54LV0 STRING:Q54LV0 EnsemblProtists:DDB0219935
GeneID:8625595 KEGG:ddi:DDB_G0286403 OMA:QENFDEN Uniprot:Q54LV0
Length = 1415
Score = 351 (128.6 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 130/531 (24%), Positives = 247/531 (46%)
Query: 13 TEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKV 72
TEK V+ E + K L+ +++K + +E E +K E ++ ++ +++ E +
Sbjct: 475 TEK-KGVKYKE-ETKHLKTKVKKNNSVIEEET---KKQAE-FERSTIIHKQDIVRFEKEY 528
Query: 73 QQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDI 132
++ +EL +E KK + S K E+ ++++ +E WS ++ + D+
Sbjct: 529 VELPKELI--VEE-KKLESMLNSLKGEVTELQREMEEKQK--QLLPWSKKHSEAKAVVDL 583
Query: 133 AKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRAR 192
SEL + + T+ L D LE +T + RK + + ++++ I + R
Sbjct: 584 KTSELAVLSKDFNGATQNLDDAIKALEDAKTISSTRKNNITKSKKELESVKAIIVDLEKR 643
Query: 193 LADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVSXXXXXXXX 252
LA E L R++ + + ++ + S N ++D ++++K ++S
Sbjct: 644 LASGKVTEENLYRNTMDAKRQLEQIKTNLSENSSRNTILDRLLKIKESGQISGIHGRLGD 703
Query: 253 XXXXXQKYDIAVSTAC-GALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQ 311
QKYD+A+STA ++ I+ ET A EA + ++++N+GR + L+ ++ Y Q
Sbjct: 704 LGAIDQKYDVAISTAAFSQMDNIIVETTAAAEACVELLRKENLGRATFMILENLE-YQRQ 762
Query: 312 CYDKYRTPENVPRLIDLIQVQDEK-IRLAFYFATRETLVAQDLNQAKRIGYSGGGYRMVT 370
+TP N PRL DLI+++DEK AF+ A TLVA L++A +I Y +R+VT
Sbjct: 763 NLGPVQTPNNTPRLFDLIKMKDEKKYATAFFTAVGHTLVADTLDEATKIAYGAKRHRVVT 822
Query: 371 LEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGA--IIEPSETL--VAQDLNQAKR 426
L+G++I+ S + L R+G + E +IE + L + DL Q +
Sbjct: 823 LDGSLIDTSGAMSGGGLKP--RVGAMNSKLKGDPKEDKKKLIELQDNLSQLDSDLRQCRD 880
Query: 427 IGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDL-EVKEKRL 485
+V +E I + S + M KA ++ L K + ++K K
Sbjct: 881 --------ELVEIENQIQQAQNRRSELELELPKMDMDIKAAITKCEELTKVIPQLKNKAK 932
Query: 486 ASLETELRILSQQKMEVETQLNCTG-----NELKYKKQEYDTCLIDVKSPK 531
S E + +I S ++ + Q + N+L+ + QE +++V P+
Sbjct: 933 LSTEKKEQIDSIKESLIVDQKSLDKVQEKVNKLESEVQEIQNSILNVGGPQ 983
>CGD|CAL0003745 [details] [associations]
symbol:SMC4 species:5476 "Candida albicans" [GO:0032116 "SMC
loading complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0000939 "condensed chromosome inner kinetochore"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0000799
"nuclear condensin complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0003745
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 EMBL:AACQ01000063
EMBL:AACQ01000062 GO:GO:0007062 eggNOG:COG1196 KO:K06675
SUPFAM:SSF75553 RefSeq:XP_716802.1 RefSeq:XP_716862.1
ProteinModelPortal:Q5A4Y2 STRING:Q5A4Y2 GeneID:3641522
GeneID:3641578 KEGG:cal:CaO19.8579 KEGG:cal:CaO19.964
Uniprot:Q5A4Y2
Length = 1368
Score = 301 (111.0 bits), Expect = 2.9e-23, P = 2.9e-23
Identities = 118/530 (22%), Positives = 247/530 (46%)
Query: 2 EVLYGKYDEERTEK-LTR-VQLVETDLKALEPELRKAVNF--LELENCVQRKHNEIYQYE 57
E+L G E T+K + R ++++ ++ +L RK ++ + LE + N++ + +
Sbjct: 423 EILEGIESELSTQKEIERDIKVLSAEIDSLGKN-RKDISKKNVSLEEKSKNNANKLKKIQ 481
Query: 58 RYV-NMKNLGEHETKVQQMEQELTANLES-IKKCTDEMESAKSELKTV-----EKKGKES 110
+ + N K+ + T +S I + E+E+ ++ L + EK + +
Sbjct: 482 KSLENSKHTVSSSNQKLSNYAVTTEKFKSDIDRLNKELETEEARLNDIRSSLTEKTSEFT 541
Query: 111 NVIGSKFR----WSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLT 166
I S + W + E +A+S +EI S + T +L + + L +++
Sbjct: 542 KEIQSLQKSLDPWDSKLKEKENEIKLAESAIEILRSQLNSTTNQLEEHKERLIQIKKLGK 601
Query: 167 ERKTLCEELTTRVPAMESEIA--ESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTS 224
+++ E +++ +E +IA E + + A K Q+ ++ + + +
Sbjct: 602 DKEVEYRENESKLGKIEEQIALGEEQCQTAKSALNNFK--SQLMSFRQKTQDSAAIVHNT 659
Query: 225 RSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEA 284
++ N+++ +++L + R+ QKYD+A+STA L+ +V ETVE +A
Sbjct: 660 QNKNKVLTALLRLANSGRIQGFYGRLGDLGTIDQKYDVAISTAAPGLDSMVVETVETAQA 719
Query: 285 VIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFAT 344
I +++ +G N I L+K+++++ P ++ RL DLIQ K AFY
Sbjct: 720 CIEYLRKNKLGYANFICLNKLRKFNLAPIQTPGDPSSIKRLFDLIQPSSSKFAPAFYSKV 779
Query: 345 RETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQD---LNQAKRIGYSGGGY- 400
TLVA +LN+AK++ Y +++VTL+G +++ S T+ A R+ S
Sbjct: 780 FNTLVAPNLNEAKKVAYGAKRWKVVTLDGKVVDTSGTMSGGGNYVSRGAMRLSDSSNSND 839
Query: 401 RMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGA-IIEPSGTMSGGGSN-PI 458
+ +T + +E T + + N+ +++ S ++ L +++P + I
Sbjct: 840 QAITADE--LEKMNTKLQEMENEFEQMN-SDYNEKIAMLNKLQVLKPETEFAISRLKLDI 896
Query: 459 RGLMGRKATVSTDTSLVKDLEVKEKRLASLET-ELRILSQQKMEVETQLN 507
+ L+ K V T + K+L ++++L E ++LS++K E+E +N
Sbjct: 897 QSLVSEKKEV---TQICKNLIAEQQKLEENNPFEQQLLSKEK-ELEELVN 942
Score = 147 (56.8 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 62/231 (26%), Positives = 107/231 (46%)
Query: 14 EKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQ 73
EK R LVE D LE + +A+ FLELE + + +Q E + K + + +
Sbjct: 349 EKANRFDLVEKDKDLLEEKKVEALRFLELEKKLINCKSVQFQIEISAHQKRIAAKQAEAD 408
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIA 133
+E+EL N ES K+ +E +SEL T ++ ++ V+ ++ S+ K R DI+
Sbjct: 409 AIEKELEENKESNKEI---LEGIESELSTQKEIERDIKVLSAEID-SL--GKNRK--DIS 460
Query: 134 KSELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRAR 192
K + L +SK KL ++ +LE + T++ +S+I R
Sbjct: 461 KKNVS--LEEKSKNNANKLKKIQKSLENSKHTVSSSNQKLSNYAVTTEKFKSDI--DRLN 516
Query: 193 LADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
+L EEA+L D L + SE + +Q+ + + D ++ K EN +
Sbjct: 517 -KELETEEARLNDIRSSLTEKTSEFTKEIQSLQKSLDPWDSKLKEK-ENEI 565
>WB|WBGene00004874 [details] [associations]
symbol:smc-4 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0051301 "cell
division" evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040039 "inductive cell migration" evidence=IMP] [GO:0007276
"gamete generation" evidence=IMP] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0000775 "chromosome, centromeric
region" evidence=IDA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0000775 GO:GO:0002119
GO:GO:0006281 GO:GO:0000910 GO:GO:0000070 GO:GO:0006310
GO:GO:0040035 GO:GO:0040039 GO:GO:0030261 GO:GO:0000793
GO:GO:0007276 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 EMBL:Z46242
PIR:T21809 RefSeq:NP_497935.1 ProteinModelPortal:Q20060 SMR:Q20060
IntAct:Q20060 STRING:Q20060 PaxDb:Q20060 EnsemblMetazoa:F35G12.8
GeneID:175603 KEGG:cel:CELE_F35G12.8 UCSC:F35G12.8 CTD:175603
WormBase:F35G12.8 HOGENOM:HOG000021360 InParanoid:Q20060
OMA:IAIEFLT NextBio:888868 Uniprot:Q20060
Length = 1549
Score = 239 (89.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 87/322 (27%), Positives = 144/322 (44%)
Query: 63 KNLGEHETKVQQM-EQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSV 121
+ + + + +V+Q+ E E TAN E+ K DE E K +KK +E+ S +
Sbjct: 443 RKIAKCQEEVEQLLEIEKTANEEADKNL-DEFEKRSEAPKEEQKKIQETWAQKS----NE 497
Query: 122 FSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
F+ K R E IA+ + E + T KL +L+ LE + + + K ++L +
Sbjct: 498 FN-KVRGEARIAREDFEDLKKLANSGTDKLIELKKRLESSEESYAKEKDELDKLKPEFDS 556
Query: 182 MESEIAESRARLADLTREEAKLLDQ-VEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSE 240
++ + L L R A+ +Q + K + R+ + S+N++I +M+ K
Sbjct: 557 WNDKLKQLSTELPTL-RNTARQKNQDLAKTRDRLETLRQQNSSCSSSNKVIQALMKEKEA 615
Query: 241 NRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGRVNV 299
R+ KY+ A+ T GA LNY++ E + VI + + R V
Sbjct: 616 GRIKSFHGRLGDLGVIDPKYEGAICTNFGARLNYLIVGKEEDAKNVINFLVANKLPRQTV 675
Query: 300 IPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRI 359
PLDK++ P PRLIDLI D ++ AFY R +V +A+R+
Sbjct: 676 QPLDKIKCDKRDLAPNPTNPLPAPRLIDLIDC-DPVLKPAFYDMVRSAIVGDSTQEAQRM 734
Query: 360 GYSGG--GYRMVTLEGAIIEPS 379
G + TLEG++I PS
Sbjct: 735 HRMPACRGVTVCTLEGSMIHPS 756
Score = 107 (42.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 47/201 (23%), Positives = 95/201 (47%)
Query: 28 ALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQELTANLESIK 87
A+E +R A+ FL EN H ++ Q R + + + ++ +M++E+ + E++
Sbjct: 303 AMENPVRAAIEFLMKENEATTIHMKLEQRRRQRYLDKIAPKQAELDKMKEEMKSIAETLD 362
Query: 88 KCTDEMESAKSELKT-VEKKGK-ESNVIG-SKFRWSVFSAKTRFECDIAKSELEIFLST- 143
+E + ++ K +E++ K + N SK + + +TR + + + + I +
Sbjct: 363 TNKNEYKQSEEAQKVMIEERSKLDKNFDSLSKELSDLGTEETRRKEALKRHQANISKAEA 422
Query: 144 -QSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLTREEA- 201
+ KE KK ++LEA EK + + + C+E E+ E + EEA
Sbjct: 423 EKEKEVKKRSNLEAAPEKAERKIAK----CQE----------EV-EQLLEIEKTANEEAD 467
Query: 202 KLLDQVEKLAREVSEKRESMQ 222
K LD+ EK + E+++ +Q
Sbjct: 468 KNLDEFEKRSEAPKEEQKKIQ 488
Score = 89 (36.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 433 GYRMVTLEGAIIEPSGTMSGGGSNPIRGLM----GRKATVSTDTSLVKDLEVKEKRLASL 488
G + TLEG++I PSG+ +GGG ++GL+ + A T + ++ EK L L
Sbjct: 742 GVTVCTLEGSMIHPSGSFTGGGKT-VKGLILTDKNKMAKQVTPEDKAAERDLAEK-LGKL 799
Query: 489 ETELRILSQQKMEVETQL 506
E L Q+ E++ QL
Sbjct: 800 RDEADELKGQEHEMDGQL 817
Score = 41 (19.5 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 399 GYRMVTLEGAIIEPS 413
G + TLEG++I PS
Sbjct: 742 GVTVCTLEGSMIHPS 756
>UNIPROTKB|Q20060 [details] [associations]
symbol:smc-4 "Structural maintenance of chromosomes protein
4" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0000775 GO:GO:0002119
GO:GO:0006281 GO:GO:0000910 GO:GO:0000070 GO:GO:0006310
GO:GO:0040035 GO:GO:0040039 GO:GO:0030261 GO:GO:0000793
GO:GO:0007276 GO:GO:0007062 eggNOG:COG1196
GeneTree:ENSGT00580000081617 KO:K06675 SUPFAM:SSF75553 EMBL:Z46242
PIR:T21809 RefSeq:NP_497935.1 ProteinModelPortal:Q20060 SMR:Q20060
IntAct:Q20060 STRING:Q20060 PaxDb:Q20060 EnsemblMetazoa:F35G12.8
GeneID:175603 KEGG:cel:CELE_F35G12.8 UCSC:F35G12.8 CTD:175603
WormBase:F35G12.8 HOGENOM:HOG000021360 InParanoid:Q20060
OMA:IAIEFLT NextBio:888868 Uniprot:Q20060
Length = 1549
Score = 239 (89.2 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 87/322 (27%), Positives = 144/322 (44%)
Query: 63 KNLGEHETKVQQM-EQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSV 121
+ + + + +V+Q+ E E TAN E+ K DE E K +KK +E+ S +
Sbjct: 443 RKIAKCQEEVEQLLEIEKTANEEADKNL-DEFEKRSEAPKEEQKKIQETWAQKS----NE 497
Query: 122 FSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
F+ K R E IA+ + E + T KL +L+ LE + + + K ++L +
Sbjct: 498 FN-KVRGEARIAREDFEDLKKLANSGTDKLIELKKRLESSEESYAKEKDELDKLKPEFDS 556
Query: 182 MESEIAESRARLADLTREEAKLLDQ-VEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSE 240
++ + L L R A+ +Q + K + R+ + S+N++I +M+ K
Sbjct: 557 WNDKLKQLSTELPTL-RNTARQKNQDLAKTRDRLETLRQQNSSCSSSNKVIQALMKEKEA 615
Query: 241 NRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGRVNV 299
R+ KY+ A+ T GA LNY++ E + VI + + R V
Sbjct: 616 GRIKSFHGRLGDLGVIDPKYEGAICTNFGARLNYLIVGKEEDAKNVINFLVANKLPRQTV 675
Query: 300 IPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRI 359
PLDK++ P PRLIDLI D ++ AFY R +V +A+R+
Sbjct: 676 QPLDKIKCDKRDLAPNPTNPLPAPRLIDLIDC-DPVLKPAFYDMVRSAIVGDSTQEAQRM 734
Query: 360 GYSGG--GYRMVTLEGAIIEPS 379
G + TLEG++I PS
Sbjct: 735 HRMPACRGVTVCTLEGSMIHPS 756
Score = 107 (42.7 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 47/201 (23%), Positives = 95/201 (47%)
Query: 28 ALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQELTANLESIK 87
A+E +R A+ FL EN H ++ Q R + + + ++ +M++E+ + E++
Sbjct: 303 AMENPVRAAIEFLMKENEATTIHMKLEQRRRQRYLDKIAPKQAELDKMKEEMKSIAETLD 362
Query: 88 KCTDEMESAKSELKT-VEKKGK-ESNVIG-SKFRWSVFSAKTRFECDIAKSELEIFLST- 143
+E + ++ K +E++ K + N SK + + +TR + + + + I +
Sbjct: 363 TNKNEYKQSEEAQKVMIEERSKLDKNFDSLSKELSDLGTEETRRKEALKRHQANISKAEA 422
Query: 144 -QSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLTREEA- 201
+ KE KK ++LEA EK + + + C+E E+ E + EEA
Sbjct: 423 EKEKEVKKRSNLEAAPEKAERKIAK----CQE----------EV-EQLLEIEKTANEEAD 467
Query: 202 KLLDQVEKLAREVSEKRESMQ 222
K LD+ EK + E+++ +Q
Sbjct: 468 KNLDEFEKRSEAPKEEQKKIQ 488
Score = 89 (36.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 26/78 (33%), Positives = 41/78 (52%)
Query: 433 GYRMVTLEGAIIEPSGTMSGGGSNPIRGLM----GRKATVSTDTSLVKDLEVKEKRLASL 488
G + TLEG++I PSG+ +GGG ++GL+ + A T + ++ EK L L
Sbjct: 742 GVTVCTLEGSMIHPSGSFTGGGKT-VKGLILTDKNKMAKQVTPEDKAAERDLAEK-LGKL 799
Query: 489 ETELRILSQQKMEVETQL 506
E L Q+ E++ QL
Sbjct: 800 RDEADELKGQEHEMDGQL 817
Score = 41 (19.5 bits), Expect = 2.0e-15, Sum P(2) = 2.0e-15
Identities = 8/15 (53%), Positives = 11/15 (73%)
Query: 399 GYRMVTLEGAIIEPS 413
G + TLEG++I PS
Sbjct: 742 GVTVCTLEGSMIHPS 756
>POMBASE|SPBP4H10.06c [details] [associations]
symbol:cut14 "condensin complex subunit Cut14"
species:4896 "Schizosaccharomyces pombe" [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=ISM] [GO:0051304 "chromosome
separation" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 PomBase:SPBP4H10.06c Pfam:PF02463 GO:GO:0005524
GO:GO:0005737 GO:GO:0005730 GO:GO:0051301 EMBL:CU329671
GO:GO:0006281 GenomeReviews:CU329671_GR GO:GO:0016887 GO:GO:0006310
GO:GO:0007076 GO:GO:0000939 GO:GO:0000796 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HOGENOM:HOG000163792 EMBL:D30787 PIR:S51623 RefSeq:NP_596180.1
ProteinModelPortal:P41003 IntAct:P41003 STRING:P41003
EnsemblFungi:SPBP4H10.06c.1 GeneID:2541319 KEGG:spo:SPBP4H10.06c
OMA:GTALEIC OrthoDB:EOG4P2T9B NextBio:20802429 GO:GO:0034500
Uniprot:P41003
Length = 1172
Score = 163 (62.4 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 81/403 (20%), Positives = 171/403 (42%)
Query: 7 KYDEERTEKLT--RVQLVETDLKALEPELRKAVNFLELEN-CVQRKHNEIYQYERYVNMK 63
K ++ER +++ + +++ L+ + + + +EL+N ++ +H ++ Q K
Sbjct: 283 KIEDERMRQMSVSSDRTLDSQLQTVNENITRISTSIELKNTALEEEHGDLQQIRG--KAK 340
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEK--KGKESNVIGSKFRWSV 121
L ET ++ + L L +K DE +S + K+ E+ + + ++ +
Sbjct: 341 EL---ETLLRGKRKRLDEVLSVYEKRKDEHQSISKDFKSQEELISSLTTGLSTTEGHETG 397
Query: 122 FSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+S K E A+ L F + + KL L + + E C++L +
Sbjct: 398 YSRKLH-E---ARDTLNDFKAEKETNRLKLEGLNKQISLTKPKKAEATKRCDQLNREIDI 453
Query: 182 MESEIAESRARL----ADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+++ + + + L +D+T E+ L ++++LA++ + +S ++F
Sbjct: 454 LQNHVEKLKMSLKNTNSDITGEDV-LQQKLKQLAKDRGNLLNELDALKSKLAYMEFTYTD 512
Query: 238 KSEN--RVSXXXXXXXXXXXXXQKYDIAVS---TACGALNYIVTETVEAGEAVIAAVKRQ 292
+ N R + YD + TA G L ++ ET + G ++ K
Sbjct: 513 PTPNFDRSKVKGLVAQLLTLNEENYDKQTALEITAGGRLYNLIVETEKIGAQLLQ--KGN 570
Query: 293 NVGRVNVIPLDKMQQYHSQCYD---KYRTPENVPRL-IDLIQVQDEKIRLAFYFATRETL 348
RV +IPL+K+ + + + N +L ++LI DE + A + TL
Sbjct: 571 LKRRVTIIPLNKITSFVASAERVGAAKKISNNKAQLALELIGYDDELLP-AMQYVFGSTL 629
Query: 349 VAQDLNQAKRIGYSGG-GYRMVTLEGAIIEPSETLVAQDLNQA 390
V AK++ + + VTL+G + +PS TL +N++
Sbjct: 630 VCDTPESAKKVTFHPSVKLKSVTLDGDVYDPSGTLTGGSVNKS 672
Score = 99 (39.9 bits), Expect = 2.1e-13, Sum P(2) = 2.1e-13
Identities = 34/114 (29%), Positives = 54/114 (47%)
Query: 415 TLVAQDLNQAKRIGYSGG-GYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTS 473
TLV AK++ + + VTL+G + +PSGT++GG N G + + S
Sbjct: 628 TLVCDTPESAKKVTFHPSVKLKSVTLDGDVYDPSGTLTGGSVNKSAGPL---LQIQKLNS 684
Query: 474 LVKDLEVKEKRLASLETELRILSQQ-----KMEVETQLNCTGNELKYKKQEYDT 522
L L+V LET+L+ L Q ++E E QL L +++E D+
Sbjct: 685 LQLKLQVVTSEYEKLETQLKDLKTQNANFHRLEQEIQLKQHELTLLIEQRETDS 738
Score = 80 (33.2 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 43/180 (23%), Positives = 84/180 (46%)
Query: 70 TKVQQMEQ-ELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
TKV M+ E+ + +E E + +T+++K + I + R + T+
Sbjct: 151 TKVLNMKATEILSMIEEASGTRMFEERKEKAFRTMQRKEAKVEEINTLLREEIEPRLTKL 210
Query: 129 ECDIAKSELEIFLSTQS--KETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEI 186
++E + FL Q + ++L+ L + + +L EELT + S I
Sbjct: 211 -----RTEKKTFLEYQHIYNDLERLSHLCTAYDYYKLSLK-----VEELTVQASQKHSHI 260
Query: 187 AESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN--RVS 244
AE + L +++E +L EK+ +++ ++R Q S S++R +D +Q +EN R+S
Sbjct: 261 AEMESSL-QTSKQEVLILK--EKI-KKIEDER-MRQMSVSSDRTLDSQLQTVNENITRIS 315
Score = 44 (20.5 bits), Expect = 1.0e-07, Sum P(2) = 1.0e-07
Identities = 13/50 (26%), Positives = 25/50 (50%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK--QEYD 521
L + +E++ + + L E+ LS E+++N EL +K E+D
Sbjct: 872 LTELIEIESAKFSGLNKEIDSLSTSMKTFESEIN--NGELTIQKLNHEFD 919
>ZFIN|ZDB-GENE-030131-105 [details] [associations]
symbol:smc2 "structural maintenance of chromosomes
2" species:7955 "Danio rerio" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 ZFIN:ZDB-GENE-030131-105 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
PANTHER:PTHR18937:SF9 EMBL:BX548248 IPI:IPI00500731
Ensembl:ENSDART00000008616 ArrayExpress:F1R0P1 Bgee:F1R0P1
Uniprot:F1R0P1
Length = 1232
Score = 151 (58.2 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 83/381 (21%), Positives = 162/381 (42%)
Query: 14 EKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQ 73
E L+ Q V+T ++ +L+K L++ +++ + E + K + E +V
Sbjct: 301 ETLSEAQRVDTKAQSAL-DLKKQ----NLKDETKKRKELVKNMEE--DKKVMSAKEAEVA 353
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIA 133
+ + L A E +K + +E+A+ K V G +N G++ S + DI+
Sbjct: 354 KAVERLKAVKEEGQKDAEALEAAQQHFKAVSA-GLSANEDGAEATLS--GQMMTCKNDIS 410
Query: 134 KSELEIFLSTQSK---ETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESR 190
K+E E Q K ++L +A ++K+ + + + E + + +++E+ +
Sbjct: 411 KAETEA-KQAQMKLKHAQQELKTKQAQVKKMDSGYKKDQDTFEAVNKCIEKLQAEM--KK 467
Query: 191 ARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN--NRLIDFVMQLKSENRVSXXXX 248
D REE LL+Q + +REV + RE+ ++ N ++ ++ R
Sbjct: 468 LNYED-GREEC-LLEQKRQFSREVIQLREAYESLMGQFPNLRFEYTDPERNWERSKVKGL 525
Query: 249 XXXXXXXXXQKYDIAVSTACGALNY-IVTETVEAGEAVIAAVKRQNVGRVNVIPLDK--- 304
A+ G Y +V + G+ ++ K + R +IPL+K
Sbjct: 526 VANLFTVTDVSNATALEVVAGGRLYNVVVDNEVTGKKLLE--KGELRRRYTIIPLNKISA 583
Query: 305 --MQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYS 362
+ + K P+NV + L+ + E +R A + TLV L+ AK++ +
Sbjct: 584 RTLNDNVVRTAKKLVGPDNVHTALSLVGYESE-LRKAMEYVFGTTLVCDSLDNAKKVAFD 642
Query: 363 GG-GYRMVTLEGAIIEPSETL 382
G + VTL G + +P TL
Sbjct: 643 KGVSTKTVTLGGDVFDPQGTL 663
Score = 104 (41.7 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 25/79 (31%), Positives = 42/79 (53%)
Query: 415 TLVAQDLNQAKRIGYSGG-GYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTS 473
TLV L+ AK++ + G + VTL G + +P GT++GG ++ + A V
Sbjct: 627 TLVCDSLDNAKKVAFDKGVSTKTVTLGGDVFDPQGTLTGGARAQTASVLSKLAEVK---D 683
Query: 474 LVKDLEVKEKRLASLETEL 492
+ L KE L+++E+EL
Sbjct: 684 IQDSLRNKEAELSAVESEL 702
Score = 92 (37.4 bits), Expect = 2.8e-06, Sum P(2) = 2.8e-06
Identities = 37/184 (20%), Positives = 89/184 (48%)
Query: 10 EERTEKLTRVQLV--ETDLKALEPELRKAVNFLELENCVQR-KH-NEIYQYERYVNMKN- 64
E++ KL +Q + E A+E + ++LE + ++ +H + +Y +V +
Sbjct: 186 EKKDAKLKEIQTILDEEITPAMEKLKEERASYLEYQKLMREIEHLSRLYVAYLFVCAEET 245
Query: 65 -LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW--SV 121
L +E ++Q+M+ + E++K+ +++ +E++ +E++ + +G R
Sbjct: 246 KLKSNE-ELQEMQSSIAKLQENMKQNEAKVKELSAEIQELERRRDKE--VGGVLRTLEET 302
Query: 122 FSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
S R + A+S L++ ETKK +L N+E+ + ++ ++ + R+ A
Sbjct: 303 LSEAQRVDTK-AQSALDLKKQNLKDETKKRKELVKNMEEDKKVMSAKEAEVAKAVERLKA 361
Query: 182 MESE 185
++ E
Sbjct: 362 VKEE 365
Score = 70 (29.7 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 25/76 (32%), Positives = 40/76 (52%)
Query: 137 LEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADL 196
+E T+ E KK++ + +EK L E +T+ +E T PAME ++ E RA
Sbjct: 165 IEEAAGTRMYECKKIS-AQKTIEKKDAKLKEIQTILDEEIT--PAME-KLKEERASYL-- 218
Query: 197 TREEAKLLDQVEKLAR 212
E KL+ ++E L+R
Sbjct: 219 --EYQKLMREIEHLSR 232
Score = 58 (25.5 bits), Expect = 8.1e-08, Sum P(2) = 8.1e-08
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 478 LEVKEKRLAS-LETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
LE K K A+ E EL+ Q+ + +++ + LK K+QE D ++++ K
Sbjct: 778 LENKMKNAAAEREKELKAAQQKLNQAKSKADAFSKRLKEKQQEADAVALELEELK 832
Score = 39 (18.8 bits), Expect = 7.2e-06, Sum P(2) = 7.2e-06
Identities = 9/44 (20%), Positives = 24/44 (54%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
K+L+ +++L +++ S++ E + + + EL+ K+E
Sbjct: 791 KELKAAQQKLNQAKSKADAFSKRLKEKQQEADAVALELEELKRE 834
>WB|WBGene00001086 [details] [associations]
symbol:dpy-27 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0016358 "dendrite development" evidence=IMP]
[GO:0042464 "dosage compensation by hypoactivation of X chromosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0000228
"nuclear chromosome" evidence=IDA] [GO:0000805 "X chromosome"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0046536 "dosage compensation complex"
evidence=IPI] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0043565 GO:GO:0006281
GO:GO:0016358 GO:GO:0010171 GO:GO:0040011 GO:GO:0006310
GO:GO:0030261 EMBL:Z35602 GO:GO:0000228 GO:GO:0000805 GO:GO:0042464
GO:GO:0007062 EMBL:L35274 PIR:T24216 RefSeq:NP_497771.1
ProteinModelPortal:P48996 SMR:P48996 IntAct:P48996 STRING:P48996
PaxDb:P48996 PRIDE:P48996 EnsemblMetazoa:R13G10.1 GeneID:175492
KEGG:cel:CELE_R13G10.1 UCSC:R13G10.1 CTD:175492 WormBase:R13G10.1
eggNOG:COG1196 GeneTree:ENSGT00580000081617 HOGENOM:HOG000021811
InParanoid:P48996 KO:K06675 OMA:FHKNLTM NextBio:888386
GO:GO:0046536 SUPFAM:SSF75553 Uniprot:P48996
Length = 1469
Score = 158 (60.7 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 68/312 (21%), Positives = 126/312 (40%)
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIA 133
Q+E + E++ + T K + K+ + K ++ + S + + E D++
Sbjct: 452 QLEWDQLKEQENVCQRTATENLIKYDQKSSADRAKHDDLEKKLSDELLQSMRAKAELDVS 511
Query: 134 KSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARL 193
+SEL+ + K++ +L+ L+ + T +TT + + + ++ +L
Sbjct: 512 ESELKDMTIMMEQGQKRVDELKGTLQTMMAENIRDNTELNAVTTELQDRKLKFDKAVEKL 571
Query: 194 ADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVSXXXXXXXXX 253
L E L + +L +EV E + + + + + +LK
Sbjct: 572 PHLKSTEQLLRSKKYELDQEVIEASNTQEVTYRHQATAK-LHELKEAGLFPGFKGRLGDL 630
Query: 254 XXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQC 312
K+D A+ST A L+Y V +T + I + R + LD ++ +
Sbjct: 631 ASIPIKFDTAISTVFFAQLDYHVVQTSDECRIGIGFCHEYKLPRTTFVFLDHLKDTDTSG 690
Query: 313 YDK-YRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYS-GGGYRMVT 370
D + P RL D I + +IR FYF + LV L +A RI G +R T
Sbjct: 691 MDSTMKFPAE--RLFDKIHCVNPEIRREFYFLIHDILVVDSLEEATRIDKKYPGRHRYCT 748
Query: 371 LEGAIIEPSETL 382
L G+I+ S L
Sbjct: 749 LNGSILNRSGAL 760
Score = 94 (38.1 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 414 ETLVAQDLNQAKRIGYS-GGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+ LV L +A RI G +R TL G+I+ SG ++GGG P G + R + +
Sbjct: 723 DILVVDSLEEATRIDKKYPGRHRYCTLNGSILNRSGALTGGGK-PTTGRI-RNDN-NPNM 779
Query: 473 SLVKDLEVKEKRLA------SLETELRI-LSQQKMEVET-----QLNCTGNELKYKKQEY 520
S VK +++ + R A +LE L++ L Q+++ + QL EL +E
Sbjct: 780 SGVKKVDLSKLRAAQEKHNHALEAHLKLQLKQEEIRADNGPIIKQLEIRKRELIMSTKEQ 839
Query: 521 DTCLIDVKS 529
T + ++KS
Sbjct: 840 KTRIAELKS 848
Score = 39 (18.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQL 506
V+DL+ K ++A L+ ++ + +++ Q+
Sbjct: 865 VEDLDEKRAQIADLKRQVEESQKSSAKIKQQI 896
>UNIPROTKB|P48996 [details] [associations]
symbol:dpy-27 "Chromosome condensation protein dpy-27"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0002119 GO:GO:0043565 GO:GO:0006281
GO:GO:0016358 GO:GO:0010171 GO:GO:0040011 GO:GO:0006310
GO:GO:0030261 EMBL:Z35602 GO:GO:0000228 GO:GO:0000805 GO:GO:0042464
GO:GO:0007062 EMBL:L35274 PIR:T24216 RefSeq:NP_497771.1
ProteinModelPortal:P48996 SMR:P48996 IntAct:P48996 STRING:P48996
PaxDb:P48996 PRIDE:P48996 EnsemblMetazoa:R13G10.1 GeneID:175492
KEGG:cel:CELE_R13G10.1 UCSC:R13G10.1 CTD:175492 WormBase:R13G10.1
eggNOG:COG1196 GeneTree:ENSGT00580000081617 HOGENOM:HOG000021811
InParanoid:P48996 KO:K06675 OMA:FHKNLTM NextBio:888386
GO:GO:0046536 SUPFAM:SSF75553 Uniprot:P48996
Length = 1469
Score = 158 (60.7 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 68/312 (21%), Positives = 126/312 (40%)
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIA 133
Q+E + E++ + T K + K+ + K ++ + S + + E D++
Sbjct: 452 QLEWDQLKEQENVCQRTATENLIKYDQKSSADRAKHDDLEKKLSDELLQSMRAKAELDVS 511
Query: 134 KSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARL 193
+SEL+ + K++ +L+ L+ + T +TT + + + ++ +L
Sbjct: 512 ESELKDMTIMMEQGQKRVDELKGTLQTMMAENIRDNTELNAVTTELQDRKLKFDKAVEKL 571
Query: 194 ADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVSXXXXXXXXX 253
L E L + +L +EV E + + + + + +LK
Sbjct: 572 PHLKSTEQLLRSKKYELDQEVIEASNTQEVTYRHQATAK-LHELKEAGLFPGFKGRLGDL 630
Query: 254 XXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQC 312
K+D A+ST A L+Y V +T + I + R + LD ++ +
Sbjct: 631 ASIPIKFDTAISTVFFAQLDYHVVQTSDECRIGIGFCHEYKLPRTTFVFLDHLKDTDTSG 690
Query: 313 YDK-YRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYS-GGGYRMVT 370
D + P RL D I + +IR FYF + LV L +A RI G +R T
Sbjct: 691 MDSTMKFPAE--RLFDKIHCVNPEIRREFYFLIHDILVVDSLEEATRIDKKYPGRHRYCT 748
Query: 371 LEGAIIEPSETL 382
L G+I+ S L
Sbjct: 749 LNGSILNRSGAL 760
Score = 94 (38.1 bits), Expect = 4.1e-12, Sum P(2) = 4.1e-12
Identities = 38/129 (29%), Positives = 63/129 (48%)
Query: 414 ETLVAQDLNQAKRIGYS-GGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+ LV L +A RI G +R TL G+I+ SG ++GGG P G + R + +
Sbjct: 723 DILVVDSLEEATRIDKKYPGRHRYCTLNGSILNRSGALTGGGK-PTTGRI-RNDN-NPNM 779
Query: 473 SLVKDLEVKEKRLA------SLETELRI-LSQQKMEVET-----QLNCTGNELKYKKQEY 520
S VK +++ + R A +LE L++ L Q+++ + QL EL +E
Sbjct: 780 SGVKKVDLSKLRAAQEKHNHALEAHLKLQLKQEEIRADNGPIIKQLEIRKRELIMSTKEQ 839
Query: 521 DTCLIDVKS 529
T + ++KS
Sbjct: 840 KTRIAELKS 848
Score = 39 (18.8 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 7/32 (21%), Positives = 19/32 (59%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQL 506
V+DL+ K ++A L+ ++ + +++ Q+
Sbjct: 865 VEDLDEKRAQIADLKRQVEESQKSSAKIKQQI 896
>UNIPROTKB|O93308 [details] [associations]
symbol:smc1a "Structural maintenance of chromosomes protein
1A" species:8355 "Xenopus laevis" [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0030893 "meiotic cohesin
complex" evidence=ISS] [GO:0042770 "signal transduction in response
to DNA damage" evidence=ISS] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 HOVERGEN:HBG039593 EMBL:AF051784
RefSeq:NP_001165905.1 UniGene:Xl.4734 ProteinModelPortal:O93308
IntAct:O93308 GeneID:100379087 KEGG:xla:100379087 CTD:100379087
Uniprot:O93308
Length = 1232
Score = 190 (71.9 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 94/414 (22%), Positives = 176/414 (42%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFL--ELENCVQRKHNEIYQYERY-VNMK 63
K +EE +K + + + +A+E E+++ L +L ++ K N ++ +++ K
Sbjct: 258 KVEEELKDKKKELGKMMREQQAIEKEIKEKDAELNQKLPQYIKAKENPSHKIKKFRAAKK 317
Query: 64 NL--GEHETKVQQMEQ-ELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIGSKFR 118
+L + + K ++ + EL + S++K E E E + + E N + R
Sbjct: 318 SLQNAQKQYKKRKADMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVKKYHR 377
Query: 119 WSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--CEELT 176
++K +A+ ELE F Q + +L DLE +KV+T ++ L EE
Sbjct: 378 LKEEASKRA--ATLAQ-ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLRELEENQ 432
Query: 177 TRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSE--------------KRESMQ 222
R+ +E IA S+ L + E L ++VE R + E R Q
Sbjct: 433 KRIEKLEEYIATSKQSLEEQKNLEETLTEEVEMAKRRIDEINSELNQVMEQLGDARIDRQ 492
Query: 223 TSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEA 281
S R + + +K S +KY IAV+ G ++ I+ ++ +
Sbjct: 493 ESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKT 552
Query: 282 GEAVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFY 341
G I +K Q +PLD ++ + ++ R + +ID+I+ + I+ A
Sbjct: 553 GRDCIQYIKEQRGEPETFLPLDYLEVKPTD--ERLRELKGAKLVIDVIRYEPPHIKKALQ 610
Query: 342 FATRETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
+A LV ++ A+RI + G ++ V L+G + + S + A DL R
Sbjct: 611 YACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 48 (22.0 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 12/45 (26%), Positives = 25/45 (55%)
Query: 462 MGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQL 506
+ +K+ V+ L++D+ K+L S E+ L ++ +ET+L
Sbjct: 878 LAKKSEVNDKNHLMEDIR---KKLGSANKEVTHLQKEVTAIETKL 919
Score = 40 (19.1 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 495 LSQQKMEVETQLNCTGNELKYKKQE 519
++++++E E Q G +L Y+K +
Sbjct: 803 IAKKRLEFENQKTRLGIQLDYEKNQ 827
>UNIPROTKB|G3X7C0 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0005634 "nucleus"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0042770 "signal transduction in response to DNA
damage" evidence=IEA] [GO:0036033 "mediator complex binding"
evidence=IEA] [GO:0032876 "negative regulation of DNA
endoreduplication" evidence=IEA] [GO:0030893 "meiotic cohesin
complex" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0009314 "response to radiation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0000075
"cell cycle checkpoint" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0000776 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:DAAA02073280
EMBL:DAAA02073281 Ensembl:ENSBTAT00000023619 Uniprot:G3X7C0
Length = 1232
Score = 198 (74.8 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 94/418 (22%), Positives = 179/418 (42%)
Query: 1 MEVLYGKYDEERTE--KLTRVQL-VETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQY 56
M+ + + E++ E K+ R Q +E ++K + EL +K +++ + K ++
Sbjct: 256 MDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAA 315
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIG 114
++ +++N +H K + EL + S++K E E E + + E N +
Sbjct: 316 KK--SLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVK 373
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--C 172
R ++K +A+ ELE F Q + +L DLE +KV+T ++ L
Sbjct: 374 KYHRLKEEASKRA--ATLAQ-ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLREI 428
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM----------- 221
EE R+ +E I S+ L + + E +L ++VE R + E + +
Sbjct: 429 EENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDAR 488
Query: 222 ---QTSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTE 277
Q S R + + +K S +KY IAV+ G ++ I+ +
Sbjct: 489 IDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVD 548
Query: 278 TVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIR 337
+ + G I +K Q +PLD ++ + +K R + +ID+I+ + I+
Sbjct: 549 SEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTD--EKLRELKGAKLVIDVIRYEPPHIK 606
Query: 338 LAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
A +A LV ++ A+RI + G ++ V L+G + + S + A DL R
Sbjct: 607 KALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 37 (18.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
++E K+L E+ L ++ +ET+L
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKL 919
>UNIPROTKB|O97593 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9913 "Bos taurus" [GO:0030893 "meiotic cohesin complex"
evidence=ISS] [GO:0007126 "meiosis" evidence=ISS] [GO:0009314
"response to radiation" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS] [GO:0003682
"chromatin binding" evidence=ISS] [GO:0000075 "cell cycle
checkpoint" evidence=ISS] [GO:0042770 "signal transduction in
response to DNA damage" evidence=ISS] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0036033 "mediator
complex binding" evidence=IEA] [GO:0032876 "negative regulation of
DNA endoreduplication" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 GO:GO:0005737 GO:GO:0000776 GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0003682 GO:GO:0042770
GO:GO:0006310 GO:GO:0030261 GO:GO:0009314 GO:GO:0032876
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030893 EMBL:AF072712 IPI:IPI00687474 PIR:S71602
RefSeq:NP_777039.1 UniGene:Bt.109789 ProteinModelPortal:O97593
STRING:O97593 PRIDE:O97593 GeneID:282370 KEGG:bta:282370 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 InParanoid:O97593 KO:K06636
OrthoDB:EOG4HX507 NextBio:20806162 Uniprot:O97593
Length = 1233
Score = 198 (74.8 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 94/418 (22%), Positives = 179/418 (42%)
Query: 1 MEVLYGKYDEERTE--KLTRVQL-VETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQY 56
M+ + + E++ E K+ R Q +E ++K + EL +K +++ + K ++
Sbjct: 256 MDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAA 315
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIG 114
++ +++N +H K + EL + S++K E E E + + E N +
Sbjct: 316 KK--SLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVK 373
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--C 172
R ++K +A+ ELE F Q + +L DLE +KV+T ++ L
Sbjct: 374 KYHRLKEEASKRA--ATLAQ-ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLREI 428
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM----------- 221
EE R+ +E I S+ L + + E +L ++VE R + E + +
Sbjct: 429 EENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDAR 488
Query: 222 ---QTSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTE 277
Q S R + + +K S +KY IAV+ G ++ I+ +
Sbjct: 489 IDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVD 548
Query: 278 TVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIR 337
+ + G I +K Q +PLD ++ + +K R + +ID+I+ + I+
Sbjct: 549 SEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTD--EKLRELKGAKLVIDVIRYEPPHIK 606
Query: 338 LAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
A +A LV ++ A+RI + G ++ V L+G + + S + A DL R
Sbjct: 607 KALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 37 (18.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
++E K+L E+ L ++ +ET+L
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKL 919
>UNIPROTKB|E2QV07 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 CTD:8243 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 EMBL:AAEX03026385 RefSeq:XP_538049.3
Ensembl:ENSCAFT00000025795 GeneID:480928 KEGG:cfa:480928
Uniprot:E2QV07
Length = 1233
Score = 198 (74.8 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 94/418 (22%), Positives = 179/418 (42%)
Query: 1 MEVLYGKYDEERTE--KLTRVQL-VETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQY 56
M+ + + E++ E K+ R Q +E ++K + EL +K +++ + K ++
Sbjct: 256 MDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAA 315
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIG 114
++ +++N +H K + EL + S++K E E E + + E N +
Sbjct: 316 KK--SLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVK 373
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--C 172
R ++K +A+ ELE F Q + +L DLE +KV+T ++ L
Sbjct: 374 KYHRLKEEASKRA--ATLAQ-ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLREI 428
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM----------- 221
EE R+ +E I S+ L + + E +L ++VE R + E + +
Sbjct: 429 EENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDAR 488
Query: 222 ---QTSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTE 277
Q S R + + +K S +KY IAV+ G ++ I+ +
Sbjct: 489 IDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVD 548
Query: 278 TVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIR 337
+ + G I +K Q +PLD ++ + +K R + +ID+I+ + I+
Sbjct: 549 SEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTD--EKLRELKGAKLVIDVIRYEPPHIK 606
Query: 338 LAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
A +A LV ++ A+RI + G ++ V L+G + + S + A DL R
Sbjct: 607 KALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 37 (18.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
++E K+L E+ L ++ +ET+L
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKL 919
>UNIPROTKB|Q14683 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0036033 "mediator complex binding" evidence=IEA] [GO:0000777
"condensed chromosome kinetochore" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IPI] [GO:0042770
"signal transduction in response to DNA damage" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0000075 "cell cycle
checkpoint" evidence=IDA] [GO:0009314 "response to radiation"
evidence=IEP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008280 "cohesin core heterodimer" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0007052 "mitotic spindle organization"
evidence=TAS] [GO:0003777 "microtubule motor activity"
evidence=NAS] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=TAS] [GO:0000776 "kinetochore" evidence=IDA] [GO:0007126
"meiosis" evidence=ISS] [GO:0000070 "mitotic sister chromatid
segregation" evidence=TAS] [GO:0030893 "meiotic cohesin complex"
evidence=IDA] [GO:0000794 "condensed nuclear chromosome"
evidence=TAS] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0007091 "metaphase/anaphase transition of mitotic
cell cycle" evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=IMP] [GO:0007062
"sister chromatid cohesion" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_71 InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
Reactome:REACT_115566 GO:GO:0005654 Reactome:REACT_21300
GO:GO:0000776 GO:GO:0051301 GO:GO:0007052 GO:GO:0006281
Reactome:REACT_1675 GO:GO:0003682 GO:GO:0042770
Reactome:REACT_111183 GO:GO:0006310 GO:GO:0000794 GO:GO:0030261
GO:GO:0009314 GO:GO:0003777 GO:GO:0032876 GO:GO:0007091
GO:GO:0000398 GO:GO:0000075 GO:GO:0000236 GO:GO:0000777
GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553 EMBL:Z97054
Orphanet:199 EMBL:AL161779 GO:GO:0030893 GO:GO:0008280 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:S78271 EMBL:D80000 EMBL:BC112127 IPI:IPI00291939 PIR:I54383
RefSeq:NP_006297.2 UniGene:Hs.211602 ProteinModelPortal:Q14683
SMR:Q14683 DIP:DIP-30911N IntAct:Q14683 MINT:MINT-233274
STRING:Q14683 PhosphoSite:Q14683 DMDM:29336622 PaxDb:Q14683
PeptideAtlas:Q14683 PRIDE:Q14683 Ensembl:ENST00000322213
GeneID:8243 KEGG:hsa:8243 UCSC:uc004dsg.3 GeneCards:GC0XM053417
HGNC:HGNC:11111 HPA:CAB025404 HPA:HPA005499 MIM:300040 MIM:300590
neXtProt:NX_Q14683 PharmGKB:PA35961 InParanoid:Q14683 OMA:NALVCET
PhylomeDB:Q14683 ChiTaRS:SMC1A GenomeRNAi:8243 NextBio:31006
ArrayExpress:Q14683 Bgee:Q14683 CleanEx:HS_SMC1A
Genevestigator:Q14683 GermOnline:ENSG00000072501 Uniprot:Q14683
Length = 1233
Score = 198 (74.8 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 94/418 (22%), Positives = 179/418 (42%)
Query: 1 MEVLYGKYDEERTE--KLTRVQL-VETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQY 56
M+ + + E++ E K+ R Q +E ++K + EL +K +++ + K ++
Sbjct: 256 MDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAA 315
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIG 114
++ +++N +H K + EL + S++K E E E + + E N +
Sbjct: 316 KK--SLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVK 373
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--C 172
R ++K +A+ ELE F Q + +L DLE +KV+T ++ L
Sbjct: 374 KYHRLKEEASKRA--ATLAQ-ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLREI 428
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM----------- 221
EE R+ +E I S+ L + + E +L ++VE R + E + +
Sbjct: 429 EENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDAR 488
Query: 222 ---QTSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTE 277
Q S R + + +K S +KY IAV+ G ++ I+ +
Sbjct: 489 IDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVD 548
Query: 278 TVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIR 337
+ + G I +K Q +PLD ++ + +K R + +ID+I+ + I+
Sbjct: 549 SEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTD--EKLRELKGAKLVIDVIRYEPPHIK 606
Query: 338 LAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
A +A LV ++ A+RI + G ++ V L+G + + S + A DL R
Sbjct: 607 KALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 37 (18.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
++E K+L E+ L ++ +ET+L
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKL 919
>UNIPROTKB|F2Z5A8 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 EMBL:GACC01000120 RefSeq:XP_003135172.3
Ensembl:ENSSSCT00000013478 GeneID:100523938 KEGG:ssc:100523938
Uniprot:F2Z5A8
Length = 1233
Score = 198 (74.8 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 94/418 (22%), Positives = 179/418 (42%)
Query: 1 MEVLYGKYDEERTE--KLTRVQL-VETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQY 56
M+ + + E++ E K+ R Q +E ++K + EL +K +++ + K ++
Sbjct: 256 MDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAA 315
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIG 114
++ +++N +H K + EL + S++K E E E + + E N +
Sbjct: 316 KK--SLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVK 373
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--C 172
R ++K +A+ ELE F Q + +L DLE +KV+T ++ L
Sbjct: 374 KYHRLKEEASKRA--ATLAQ-ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLREI 428
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM----------- 221
EE R+ +E I S+ L + + E +L ++VE R + E + +
Sbjct: 429 EENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDAR 488
Query: 222 ---QTSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTE 277
Q S R + + +K S +KY IAV+ G ++ I+ +
Sbjct: 489 IDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVD 548
Query: 278 TVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIR 337
+ + G I +K Q +PLD ++ + +K R + +ID+I+ + I+
Sbjct: 549 SEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTD--EKLRELKGAKLVIDVIRYEPPHIK 606
Query: 338 LAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
A +A LV ++ A+RI + G ++ V L+G + + S + A DL R
Sbjct: 607 KALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 37 (18.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
++E K+L E+ L ++ +ET+L
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKL 919
>MGI|MGI:1344345 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10090 "Mus musculus" [GO:0000075 "cell cycle checkpoint"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0000776 "kinetochore" evidence=ISO] [GO:0003682 "chromatin
binding" evidence=ISO;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IPI] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;IDA] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=IDA] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO] [GO:0046982
"protein heterodimerization activity" evidence=ISO] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
MGI:MGI:1344345 GO:GO:0005524 GO:GO:0007126 GO:GO:0005737
GO:GO:0005654 GO:GO:0000776 GO:GO:0051301 GO:GO:0007067
GO:GO:0006281 GO:GO:0003682 GO:GO:0042770 Reactome:REACT_118161
Reactome:REACT_120463 Reactome:REACT_75800 GO:GO:0006310
GO:GO:0030261 GO:GO:0009314 GO:GO:0032876 GO:GO:0019827
GO:GO:0000075 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:AL672180 GO:GO:0036033 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AF047600 EMBL:BC131667 EMBL:AK007334 EMBL:AK013648
EMBL:AK017948 EMBL:AK088183 IPI:IPI00123870 RefSeq:NP_062684.2
UniGene:Mm.482095 PDB:2WD5 PDBsum:2WD5 ProteinModelPortal:Q9CU62
SMR:Q9CU62 DIP:DIP-57021N IntAct:Q9CU62 STRING:Q9CU62
PhosphoSite:Q9CU62 PaxDb:Q9CU62 PRIDE:Q9CU62
Ensembl:ENSMUST00000045312 GeneID:24061 KEGG:mmu:24061
GeneTree:ENSGT00580000081569 InParanoid:A2AFQ5
EvolutionaryTrace:Q9CU62 NextBio:304025 Bgee:Q9CU62
CleanEx:MM_SMC1A Genevestigator:Q9CU62
GermOnline:ENSMUSG00000041133 Uniprot:Q9CU62
Length = 1233
Score = 198 (74.8 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 94/418 (22%), Positives = 179/418 (42%)
Query: 1 MEVLYGKYDEERTE--KLTRVQL-VETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQY 56
M+ + + E++ E K+ R Q +E ++K + EL +K +++ + K ++
Sbjct: 256 MDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAA 315
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIG 114
++ +++N +H K + EL + S++K E E E + + E N +
Sbjct: 316 KK--SLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVK 373
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--C 172
R ++K +A+ ELE F Q + +L DLE +KV+T ++ L
Sbjct: 374 KYHRLKEEASKRA--ATLAQ-ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLREI 428
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM----------- 221
EE R+ +E I S+ L + + E +L ++VE R + E + +
Sbjct: 429 EENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDAR 488
Query: 222 ---QTSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTE 277
Q S R + + +K S +KY IAV+ G ++ I+ +
Sbjct: 489 IDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVD 548
Query: 278 TVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIR 337
+ + G I +K Q +PLD ++ + +K R + +ID+I+ + I+
Sbjct: 549 SEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTD--EKLRELKGAKLVIDVIRYEPPHIK 606
Query: 338 LAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
A +A LV ++ A+RI + G ++ V L+G + + S + A DL R
Sbjct: 607 KALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 37 (18.1 bits), Expect = 9.6e-11, Sum P(2) = 9.6e-11
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
++E K+L E+ L ++ +ET+L
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKL 919
>UNIPROTKB|I3LMC6 [details] [associations]
symbol:LOC100523938 "Structural maintenance of chromosomes
protein" species:9823 "Sus scrofa" [GO:0005634 "nucleus"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 OMA:NALVCET GeneTree:ENSGT00580000081569
EMBL:CU695116 EMBL:CU914655 Ensembl:ENSSSCT00000028659
Uniprot:I3LMC6
Length = 1235
Score = 198 (74.8 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 94/418 (22%), Positives = 179/418 (42%)
Query: 1 MEVLYGKYDEERTE--KLTRVQL-VETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQY 56
M+ + + E++ E K+ R Q +E ++K + EL +K +++ + K ++
Sbjct: 256 MDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAA 315
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIG 114
++ +++N +H K + EL + S++K E E E + + E N +
Sbjct: 316 KK--SLQNAQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVK 373
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--C 172
R ++K +A+ ELE F Q + +L DLE +KV+T ++ L
Sbjct: 374 KYHRLKEEASKRA--ATLAQ-ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLREI 428
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM----------- 221
EE R+ +E I S+ L + + E +L ++VE R + E + +
Sbjct: 429 EENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDAR 488
Query: 222 ---QTSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTE 277
Q S R + + +K S +KY IAV+ G ++ I+ +
Sbjct: 489 IDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVD 548
Query: 278 TVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIR 337
+ + G I +K Q +PLD ++ + +K R + +ID+I+ + I+
Sbjct: 549 SEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTD--EKLRELKGAKLVIDVIRYEPPHIK 606
Query: 338 LAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
A +A LV ++ A+RI + G ++ V L+G + + S + A DL R
Sbjct: 607 KALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 37 (18.1 bits), Expect = 9.7e-11, Sum P(2) = 9.7e-11
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
++E K+L E+ L ++ +ET+L
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKL 919
>RGD|61991 [details] [associations]
symbol:Smc1a "structural maintenance of chromosomes 1A"
species:10116 "Rattus norvegicus" [GO:0000075 "cell cycle
checkpoint" evidence=ISO;ISS] [GO:0000776 "kinetochore"
evidence=ISO;ISS] [GO:0003682 "chromatin binding" evidence=ISO;ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO;ISS] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007126 "meiosis"
evidence=ISO;IDA] [GO:0009314 "response to radiation"
evidence=ISO;ISS] [GO:0019827 "stem cell maintenance" evidence=ISO]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0030893
"meiotic cohesin complex" evidence=ISO;ISS] [GO:0032876 "negative
regulation of DNA endoreduplication" evidence=ISO] [GO:0036033
"mediator complex binding" evidence=ISO] [GO:0042770 "signal
transduction in response to DNA damage" evidence=ISO;ISS]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 197 (74.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 94/418 (22%), Positives = 179/418 (42%)
Query: 1 MEVLYGKYDEERTE--KLTRVQL-VETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQY 56
M+ + + E++ E K+ R Q +E ++K + EL +K +++ + K ++
Sbjct: 256 MDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAA 315
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIG 114
++ +++N +H K + EL + S++K E E E + + E N +
Sbjct: 316 KK--SLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVK 373
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--C 172
R ++K +A+ ELE F Q + +L DLE +KV+T ++ L
Sbjct: 374 KYHRLKEEASKRA--ATLAQ-ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLREI 428
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM----------- 221
EE R+ +E I S+ L + + E +L ++VE R + E + +
Sbjct: 429 EENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDAR 488
Query: 222 ---QTSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTE 277
Q S R + + +K S +KY IAV+ G ++ I+ +
Sbjct: 489 IDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVD 548
Query: 278 TVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIR 337
+ + G I +K Q +PLD ++ + +K R + +ID+I+ + I+
Sbjct: 549 SEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTD--EKLRELKGAKLVIDVIRYEPPHIK 606
Query: 338 LAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
A +A LV ++ A+RI + G ++ V L+G + + S + A DL R
Sbjct: 607 KALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 37 (18.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
++E K+L E+ L ++ +ET+L
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKL 919
>UNIPROTKB|Q9Z1M9 [details] [associations]
symbol:Smc1a "Structural maintenance of chromosomes protein
1A" species:10116 "Rattus norvegicus" [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
RGD:61991 GO:GO:0005524 GO:GO:0005634 GO:GO:0007126 GO:GO:0005737
GO:GO:0000776 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0003682 GO:GO:0042770 GO:GO:0006310 GO:GO:0030261
GO:GO:0009314 GO:GO:0032876 GO:GO:0000075 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0030893 CTD:8243
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
EMBL:AJ005113 IPI:IPI00209018 RefSeq:NP_113871.1 UniGene:Rn.11763
ProteinModelPortal:Q9Z1M9 STRING:Q9Z1M9 PhosphoSite:Q9Z1M9
PRIDE:Q9Z1M9 GeneID:63996 KEGG:rno:63996 NextBio:612558
ArrayExpress:Q9Z1M9 Genevestigator:Q9Z1M9 Uniprot:Q9Z1M9
Length = 1233
Score = 197 (74.4 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 94/418 (22%), Positives = 179/418 (42%)
Query: 1 MEVLYGKYDEERTE--KLTRVQL-VETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQY 56
M+ + + E++ E K+ R Q +E ++K + EL +K +++ + K ++
Sbjct: 256 MDKVEDELKEKKKELGKMMREQQQIEKEIKEKDSELNQKRPQYIKAKENTSHKIKKLEAA 315
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIG 114
++ +++N +H K + EL + S++K E E E + + E N +
Sbjct: 316 KK--SLQNRQKHYKKRKGDMDELEKEMLSVEKARQEFEERMEEESQSQGRDLTLEENQVK 373
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--C 172
R ++K +A+ ELE F Q + +L DLE +KV+T ++ L
Sbjct: 374 KYHRLKEEASKRA--ATLAQ-ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLREI 428
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM----------- 221
EE R+ +E I S+ L + + E +L ++VE R + E + +
Sbjct: 429 EENQKRIEKLEEYITTSKQSLEEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDAR 488
Query: 222 ---QTSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTE 277
Q S R + + +K S +KY IAV+ G ++ I+ +
Sbjct: 489 IDRQESSRQQRKAEIMESIKRLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVD 548
Query: 278 TVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIR 337
+ + G I +K Q +PLD ++ + +K R + +ID+I+ + I+
Sbjct: 549 SEKTGRDCIQYIKEQRGEPETFLPLDYLEVKPTD--EKLRELKGAKLVIDVIRYEPPHIK 606
Query: 338 LAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
A +A LV ++ A+RI + G ++ V L+G + + S + A DL R
Sbjct: 607 KALQYACGNALVCDNVEDARRIAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 37 (18.1 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 8/30 (26%), Positives = 16/30 (53%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
++E K+L E+ L ++ +ET+L
Sbjct: 890 EMEEIRKKLGGANKEMTHLQKEVTAIETKL 919
>ZFIN|ZDB-GENE-090506-9 [details] [associations]
symbol:smc1a "structural maintenance of chromosomes
1A" species:7955 "Danio rerio" [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-090506-9 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 CTD:8243 KO:K06636 GeneTree:ENSGT00580000081569
EMBL:CR354431 IPI:IPI00506664 RefSeq:NP_001155103.1
UniGene:Dr.120420 Ensembl:ENSDART00000078148 GeneID:559665
KEGG:dre:559665 OMA:ERIRHAN NextBio:20883076 Uniprot:E7F0X6
Length = 1232
Score = 188 (71.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 95/398 (23%), Positives = 173/398 (43%)
Query: 20 QLVETDLKALEPEL-RKAVNFLEL-ENCVQR-KHNEIYQYERYVNMKNLGEHETKVQQME 76
Q VE ++K + EL +K +++ EN + K E+ + K + + +++++
Sbjct: 278 QNVEKEIKEKDAELNQKRPQYIKAKENTAHKIKKLEVARKSLQNAQKMYKKRKADIEELD 337
Query: 77 QELTANLESIKKCTDEMES-AKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKS 135
+E A S ++ + ME A+S+ + + E N + R ++K +A+
Sbjct: 338 REQGAVEMSRQEFEERMEEEAQSQGQDLTL---EENQVKQYHRLKEEASKRA--ATLAQ- 391
Query: 136 ELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--CEELTTRVPAMESEIAESRARL 193
ELE F Q + +L DLE +K++T ++ + EE R+ +E IA SR L
Sbjct: 392 ELEKFNRDQKADQDRL-DLEER-KKIETEAKIKQKIREIEENQKRIEKLEDYIATSRQSL 449
Query: 194 ADLTREEAKLLDQVEKLAREVSE--------------KRESMQTSRSNNRLIDFVMQLKS 239
+ R E +L ++VE R + E R Q + R + + +K
Sbjct: 450 DEQRRMEEELTEEVELAKRRIDEINMELNQVMEQLGDARIDRQENSRQQRKAEIMESIKR 509
Query: 240 ENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGRVN 298
S +KY IAV+ G ++ I+ ++ + G I +K Q
Sbjct: 510 LYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPET 569
Query: 299 VIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
+PLD ++ + +K R +ID+I+ + I+ A +A LV +++ A+R
Sbjct: 570 FLPLDYLEVKPTD--EKLRELRGAKLVIDVIRYEPPHIKKALQYACGNALVCENVEDARR 627
Query: 359 IGYSGGGYR--MVTLEGAIIEPSETLV--AQDLNQAKR 392
I + GG YR V L+G + + S + A DL R
Sbjct: 628 IAF-GGPYRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 45 (20.9 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQL 506
+++E K+L S EL L ++ +ET+L
Sbjct: 889 REMEEIRKKLGSANKELTQLQKEVTAIETKL 919
Score = 39 (18.8 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 495 LSQQKMEVETQLNCTGNELKYKKQE 519
++++++E ETQ +L Y+K +
Sbjct: 803 IAKKRLEFETQKTRLAIQLDYEKNQ 827
>UNIPROTKB|F1NN18 [details] [associations]
symbol:SMC4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0051276 "chromosome organization"
evidence=IEA] InterPro:IPR010935 Pfam:PF06470 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
GeneTree:ENSGT00580000081617 SUPFAM:SSF75553 EMBL:AADN02021066
IPI:IPI00819477 Ensembl:ENSGALT00000039159 ArrayExpress:F1NN18
Uniprot:F1NN18
Length = 609
Score = 174 (66.3 bits), Expect = 8.5e-10, P = 8.5e-10
Identities = 37/69 (53%), Positives = 48/69 (69%)
Query: 315 KYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLEG 373
K TPEN PRLIDL++V+D+ AFYFA R+TLV +DL A RI + +R+VTL+G
Sbjct: 10 KIPTPENAPRLIDLVKVEDKSFSPAFYFALRDTLVVKDLEDATRIAFQRDKRWRVVTLKG 69
Query: 374 AIIEPSETL 382
IIE S T+
Sbjct: 70 EIIEQSGTM 78
Score = 135 (52.6 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 37/93 (39%), Positives = 57/93 (61%)
Query: 414 ETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+TLV +DL A RI + +R+VTL+G IIE SGTM+GGG ++G MG +
Sbjct: 41 DTLVVKDLEDATRIAFQRDKRWRVVTLKGEIIEQSGTMTGGGGKVMKGRMG--------S 92
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
S+V D+ +E + LE+EL+ SQ+ ++ E +
Sbjct: 93 SVVTDVSPEE--VNRLESELQRDSQRAVQCEEE 123
>UNIPROTKB|P51834 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:224308 "Bacillus subtilis subsp. subtilis str. 168"
[GO:0005515 "protein binding" evidence=IPI] [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 EMBL:AL009126 GenomeReviews:AL009126_GR
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
EMBL:D64116 EMBL:D49781 PIR:G69708 RefSeq:NP_389476.2
ProteinModelPortal:P51834 SMR:P51834 IntAct:P51834
EnsemblBacteria:EBBACT00000001044 GeneID:938085 KEGG:bsu:BSU15940
PATRIC:18974993 GenoList:BSU15940 HOGENOM:HOG000036392 KO:K03529
ProtClustDB:CLSK2765274 BioCyc:BSUB:BSU15940-MONOMER
TIGRFAMs:TIGR02168 Uniprot:P51834
Length = 1186
Score = 184 (69.8 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 121/539 (22%), Positives = 226/539 (41%)
Query: 10 EERTEKLTRVQLVETD-LKALEPELRKAVNFLELENCVQRKHN---EIYQYERYVNMKNL 65
+E ++L +V LV ++ L+ LE RK V +N VQ + I Q+++ + L
Sbjct: 280 DESVDELQQVLLVTSEELEKLEG--RKEVLKERKKNAVQNQEQLEEAIVQFQQKETV--L 335
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKS-ELKTVEKKGKESNVIGSKFRWSVFSA 124
E +K + + + L A ++ ++ E + A S + VE+K ++ F A
Sbjct: 336 KEELSKQEAVFETLQAEVKQLRAQVKEKQQALSLHNENVEEKIEQLK--SDYFELLNSQA 393
Query: 125 KTRFECDIAKSELEIFLSTQSKET-KKLADL-EANLEKVQTTLTERKTLCEELTTRVPAM 182
R E + ++ +QS T ++LAD E +L++ + ++ RK CE T +
Sbjct: 394 SIRNELQLLDDQM-----SQSAVTLQRLADNNEKHLQE-RHDISARKAACE---TEFARI 444
Query: 183 ESEIAESRARLADL-TREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLI-----DF--- 233
E EI D+ T+ E K Q EK + + + +Q +RS ++ DF
Sbjct: 445 EQEIHSQVGAYRDMQTKYEQKKR-QYEKNESALYQAYQYVQQARSKKDMLETMQGDFSGF 503
Query: 234 ---VMQ-LKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAA 288
V + LK++ R+ QKY+ A+ A GA ++VT+ ++ I
Sbjct: 504 YQGVKEVLKAKERLGGIRGAVLELISTEQKYETAIEIALGASAQHVVTDDEQSARKAIQY 563
Query: 289 VKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRL---IDLIQVQDEKIRLAFYFATR 345
+K+ + GR +PL ++ Q D + L +L+ D R
Sbjct: 564 LKQNSFGRATFLPLSVIRDRQLQSRDAETAARHSSFLGVASELVTF-DPAYRSVIQNLLG 622
Query: 346 ETLVAQDLNQAKRIG-YSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRM-- 402
L+ +DL A + G YR+VTLEG ++ P ++ + + K G +
Sbjct: 623 TVLITEDLKGANELAKLLGHRYRIVTLEGDVVNPGGSMTGGAVKK-KNNSLLGRSRELED 681
Query: 403 VTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLM 462
VT A +E L+ Q++ K + + + A + +G ++G +
Sbjct: 682 VTKRLAEMEEKTALLEQEVKTLKH------SIQDMEKKLADLRETGEGLRLKQQDVKGQL 735
Query: 463 GRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+ + +L +EK S E R + ++K+E E L+ ++K +++ D
Sbjct: 736 YELQVAEKNINTHLELYDQEKSALSESDEERKVRKRKLEEE--LSAVSEKMKQLEEDID 792
Score = 42 (19.8 bits), Expect = 8.9e-10, Sum P(2) = 8.9e-10
Identities = 10/40 (25%), Positives = 20/40 (50%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
L ++L +++ LE ++ L++QK + NEL
Sbjct: 773 LEEELSAVSEKMKQLEEDIDRLTKQKQTQSSTKESLSNEL 812
>GENEDB_PFALCIPARUM|MAL13P1.96 [details] [associations]
symbol:MAL13P1.96 "chromosome segregation
protein, putative" species:5833 "Plasmodium falciparum" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISS]
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0051301 GO:GO:0046982 GO:GO:0007076 EMBL:AL844509
GO:GO:0000796 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HSSP:P32908 HOGENOM:HOG000163792 OMA:CQNGKIP
RefSeq:XP_001349920.1 ProteinModelPortal:Q8IED2 IntAct:Q8IED2
MINT:MINT-1645015 PRIDE:Q8IED2 EnsemblProtists:MAL13P1.96:mRNA
GeneID:813987 KEGG:pfa:MAL13P1.96 EuPathDB:PlasmoDB:PF3D7_1318400
ProtClustDB:CLSZ2432256 Uniprot:Q8IED2
Length = 1218
Score = 128 (50.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 59/244 (24%), Positives = 120/244 (49%)
Query: 8 YDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV-NMKNLG 66
Y+ +RT + +V+ D K E+ K + F E+E + + E +Y ++V N + +
Sbjct: 175 YEVKRTNAIKL--MVKKDQKL--GEINKVL-FEEIEPTLVKLKKEKEEYNKFVSNNEEIE 229
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
++E KV+ + A + + KC +++E AKSE K +EK KE + K++ + K
Sbjct: 230 KYE-KVEIAYKYYVAK-KMMTKCEEKIEDAKSEEKILEKGIKEIDKDIEKYK--IEKEKI 285
Query: 127 RFECDIAKSELEIFLSTQSKETKKLADL--EANLEKVQTTLTERKTLCEELTTRVPAMES 184
E + A ++I +S + + KK++ L EA +E + +R+ E++ + +++
Sbjct: 286 VKETNTASEPMKILISQKEELEKKISQLKSEAKMENKEKAKEKRRR--EDIKKEINNLQN 343
Query: 185 EIAESRARLADLTREEAK----LLDQVEKLAREVSEKRESMQ----TSRSNNRLI-DFVM 235
++ + + + + K L ++E L E++EK+ +M +NN F
Sbjct: 344 KLDDYQKN-NEKNNKNLKSYEDLKKKIEILKEELNEKQLTMNCLLSAGTNNNEYTGSFRE 402
Query: 236 QLKS 239
QLK+
Sbjct: 403 QLKN 406
Score = 100 (40.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 84/415 (20%), Positives = 174/415 (41%)
Query: 1 MEVLYGKYDE--ERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYER 58
M++L + +E ++ +L +E KA E R+ + E+ N +Q K ++ YQ
Sbjct: 296 MKILISQKEELEKKISQLKSEAKMENKEKAKEKRRREDIK-KEINN-LQNKLDD-YQKNN 352
Query: 59 YVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFR 118
N KNL +E +L +E +K +E+ + + + G +N FR
Sbjct: 353 EKNNKNLKSYE--------DLKKKIEILK---EELNEKQLTMNCLLSAGTNNNEYTGSFR 401
Query: 119 WSVFSAKTRFECDIAKSELEI--FLSTQS---------KETKKLADLEAN-LEKVQTTLT 166
+ + KT +++K+E +I FL KE +K + E N + K +
Sbjct: 402 EQLKNYKT----NLSKAETQINNFLQNNKHLEKEIMTLKEQRKKYEKEYNEISKEKDIEE 457
Query: 167 ERKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRS 226
++K LCE+ ++ + E L L ++ L + +EKL +E+ + +
Sbjct: 458 KKKKLCEQELDKLNKEYNNFME----LDTLKTDKNILYNDMEKLQQELQVLKNII----- 508
Query: 227 NNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKY---DIAVSTACGA-LNYIVTETVEAG 282
N+ ID+ ++ S + + ++Y +AV G L Y++ + E
Sbjct: 509 NSVKIDY--KIPSNMKSTDVLGQIYKLIKIKKEYINTALAVHLILGGKLTYLLVQNKEHS 566
Query: 283 EAVIAAVKRQNVG-RVNVIPLDKM---QQYHSQCYDKYRT--------PENVPRLIDLIQ 330
+ + + RV ++PL+ ++ H + ++ R +V +D+++
Sbjct: 567 KRLFEYNNFSSGSKRVTLLPLEDCVISREVHEKHIEECRRNVGLNIKDKNDVIYFLDIME 626
Query: 331 VQDEKIRLAFYFATRETLVAQDLNQAKRIGYSGG---GYRMVTLEGAIIEPSETL 382
D+ + + TL+ +++ K+I Y+ Y +TLEG + S ++
Sbjct: 627 Y-DKNLERIIQYLFNGTLICSNVDLCKKITYNPNKKLSYTTITLEGDKFDTSGSM 680
Score = 98 (39.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 415 TLVAQDLNQAKRIGYSGG---GYRMVTLEGAIIEPSGTMSGGGSNPIRGLM-------GR 464
TL+ +++ K+I Y+ Y +TLEG + SG+MSGG + I + +
Sbjct: 642 TLICSNVDLCKKITYNPNKKLSYTTITLEGDKFDTSGSMSGGSNKNINLFLLNYEKYKHK 701
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
K + + +K++ K K L E + +I+S++ E LN N ++ K
Sbjct: 702 KEQYHDNENKLKEVSEKLKSLEKAEEKKKIISKELQIYENNLNNIENRMETSK 754
Score = 46 (21.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQK---MEVET---QLNCTGNELKYKKQE 519
+ S KD+E K+K+L E EL L+++ ME++T N N+++ +QE
Sbjct: 448 EISKEKDIEEKKKKLC--EQELDKLNKEYNNFMELDTLKTDKNILYNDMEKLQQE 500
Score = 45 (20.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 469 STDTSLVKDLEVK----EKRLASLETELRILSQQKMEVETQLNCTGNELKY--KKQE 519
STD ++ ++E K EK + + L+ L + E+++ + NE+K+ KK E
Sbjct: 859 STD-EIINEIEKKIEDIEKNINITKENLKELENKITELQSSFSSYENEMKHVVKKIE 914
Score = 44 (20.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKY 515
+VK +E EK+ + +L+ L ++++ L + + +KY
Sbjct: 909 VVKKIEDLEKKKSENILDLKKLENTLLDLQKDLKTSSDTVKY 950
>UNIPROTKB|Q8IED2 [details] [associations]
symbol:MAL13P1.96 "Structural maintenance of chromosomes
protein 2" species:36329 "Plasmodium falciparum 3D7" [GO:0000070
"mitotic sister chromatid segregation" evidence=ISS] [GO:0000796
"condensin complex" evidence=ISS] [GO:0007076 "mitotic chromosome
condensation" evidence=ISS] [GO:0046982 "protein heterodimerization
activity" evidence=ISS] InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0051301 GO:GO:0046982
GO:GO:0007076 EMBL:AL844509 GO:GO:0000796 eggNOG:COG1196
SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9 HSSP:P32908
HOGENOM:HOG000163792 OMA:CQNGKIP RefSeq:XP_001349920.1
ProteinModelPortal:Q8IED2 IntAct:Q8IED2 MINT:MINT-1645015
PRIDE:Q8IED2 EnsemblProtists:MAL13P1.96:mRNA GeneID:813987
KEGG:pfa:MAL13P1.96 EuPathDB:PlasmoDB:PF3D7_1318400
ProtClustDB:CLSZ2432256 Uniprot:Q8IED2
Length = 1218
Score = 128 (50.1 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 59/244 (24%), Positives = 120/244 (49%)
Query: 8 YDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV-NMKNLG 66
Y+ +RT + +V+ D K E+ K + F E+E + + E +Y ++V N + +
Sbjct: 175 YEVKRTNAIKL--MVKKDQKL--GEINKVL-FEEIEPTLVKLKKEKEEYNKFVSNNEEIE 229
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
++E KV+ + A + + KC +++E AKSE K +EK KE + K++ + K
Sbjct: 230 KYE-KVEIAYKYYVAK-KMMTKCEEKIEDAKSEEKILEKGIKEIDKDIEKYK--IEKEKI 285
Query: 127 RFECDIAKSELEIFLSTQSKETKKLADL--EANLEKVQTTLTERKTLCEELTTRVPAMES 184
E + A ++I +S + + KK++ L EA +E + +R+ E++ + +++
Sbjct: 286 VKETNTASEPMKILISQKEELEKKISQLKSEAKMENKEKAKEKRRR--EDIKKEINNLQN 343
Query: 185 EIAESRARLADLTREEAK----LLDQVEKLAREVSEKRESMQ----TSRSNNRLI-DFVM 235
++ + + + + K L ++E L E++EK+ +M +NN F
Sbjct: 344 KLDDYQKN-NEKNNKNLKSYEDLKKKIEILKEELNEKQLTMNCLLSAGTNNNEYTGSFRE 402
Query: 236 QLKS 239
QLK+
Sbjct: 403 QLKN 406
Score = 100 (40.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 84/415 (20%), Positives = 174/415 (41%)
Query: 1 MEVLYGKYDE--ERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYER 58
M++L + +E ++ +L +E KA E R+ + E+ N +Q K ++ YQ
Sbjct: 296 MKILISQKEELEKKISQLKSEAKMENKEKAKEKRRREDIK-KEINN-LQNKLDD-YQKNN 352
Query: 59 YVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFR 118
N KNL +E +L +E +K +E+ + + + G +N FR
Sbjct: 353 EKNNKNLKSYE--------DLKKKIEILK---EELNEKQLTMNCLLSAGTNNNEYTGSFR 401
Query: 119 WSVFSAKTRFECDIAKSELEI--FLSTQS---------KETKKLADLEAN-LEKVQTTLT 166
+ + KT +++K+E +I FL KE +K + E N + K +
Sbjct: 402 EQLKNYKT----NLSKAETQINNFLQNNKHLEKEIMTLKEQRKKYEKEYNEISKEKDIEE 457
Query: 167 ERKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRS 226
++K LCE+ ++ + E L L ++ L + +EKL +E+ + +
Sbjct: 458 KKKKLCEQELDKLNKEYNNFME----LDTLKTDKNILYNDMEKLQQELQVLKNII----- 508
Query: 227 NNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKY---DIAVSTACGA-LNYIVTETVEAG 282
N+ ID+ ++ S + + ++Y +AV G L Y++ + E
Sbjct: 509 NSVKIDY--KIPSNMKSTDVLGQIYKLIKIKKEYINTALAVHLILGGKLTYLLVQNKEHS 566
Query: 283 EAVIAAVKRQNVG-RVNVIPLDKM---QQYHSQCYDKYRT--------PENVPRLIDLIQ 330
+ + + RV ++PL+ ++ H + ++ R +V +D+++
Sbjct: 567 KRLFEYNNFSSGSKRVTLLPLEDCVISREVHEKHIEECRRNVGLNIKDKNDVIYFLDIME 626
Query: 331 VQDEKIRLAFYFATRETLVAQDLNQAKRIGYSGG---GYRMVTLEGAIIEPSETL 382
D+ + + TL+ +++ K+I Y+ Y +TLEG + S ++
Sbjct: 627 Y-DKNLERIIQYLFNGTLICSNVDLCKKITYNPNKKLSYTTITLEGDKFDTSGSM 680
Score = 98 (39.6 bits), Expect = 1.8e-09, Sum P(2) = 1.8e-09
Identities = 30/113 (26%), Positives = 54/113 (47%)
Query: 415 TLVAQDLNQAKRIGYSGG---GYRMVTLEGAIIEPSGTMSGGGSNPIRGLM-------GR 464
TL+ +++ K+I Y+ Y +TLEG + SG+MSGG + I + +
Sbjct: 642 TLICSNVDLCKKITYNPNKKLSYTTITLEGDKFDTSGSMSGGSNKNINLFLLNYEKYKHK 701
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
K + + +K++ K K L E + +I+S++ E LN N ++ K
Sbjct: 702 KEQYHDNENKLKEVSEKLKSLEKAEEKKKIISKELQIYENNLNNIENRMETSK 754
Score = 46 (21.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQK---MEVET---QLNCTGNELKYKKQE 519
+ S KD+E K+K+L E EL L+++ ME++T N N+++ +QE
Sbjct: 448 EISKEKDIEEKKKKLC--EQELDKLNKEYNNFMELDTLKTDKNILYNDMEKLQQE 500
Score = 45 (20.9 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 469 STDTSLVKDLEVK----EKRLASLETELRILSQQKMEVETQLNCTGNELKY--KKQE 519
STD ++ ++E K EK + + L+ L + E+++ + NE+K+ KK E
Sbjct: 859 STD-EIINEIEKKIEDIEKNINITKENLKELENKITELQSSFSSYENEMKHVVKKIE 914
Score = 44 (20.5 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 10/42 (23%), Positives = 23/42 (54%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKY 515
+VK +E EK+ + +L+ L ++++ L + + +KY
Sbjct: 909 VVKKIEDLEKKKSENILDLKKLENTLLDLQKDLKTSSDTVKY 950
>UNIPROTKB|F1SP73 [details] [associations]
symbol:F1SP73 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005694 GO:GO:0006281 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:WIASERQ
Ensembl:ENSSSCT00000005947 Uniprot:F1SP73
Length = 1169
Score = 137 (53.3 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 51/220 (23%), Positives = 102/220 (46%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE 69
+E + +++ E +L+ALE EL L+N ++ Q+E +L +
Sbjct: 657 QELKDVQDELRIKENELQALEEELA------HLKNTAEKYRQLKQQWEMKTEEADL--LQ 708
Query: 70 TKVQQME-QELTANLESIKKCTDEMESAKSELKTVEKKGKES-NVIGSKFRWSVFSAKTR 127
TK+QQ + L+++KK +E E K ++KK +E V+ +K + + A+
Sbjct: 709 TKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNA--EAERE 766
Query: 128 FECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIA 187
E A+ +L+ + +KK+ + + +E + L E K ++ A+ I
Sbjct: 767 RELKDAQRKLDSAKTKADASSKKMKEKQQEVEAITLELEELKREHASCEQQLEAVNEAIK 826
Query: 188 ESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN 227
++A + E AK + V K EV++++E + T++ N
Sbjct: 827 SYEGQIAVVAAEVAKNKESVNKAQEEVTKQKEVI-TAQDN 865
Score = 129 (50.5 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 91/410 (22%), Positives = 174/410 (42%)
Query: 10 EERTEKLTRVQLVET-DLKALEPELRKAVNFL--ELENCVQ--RKHNEIYQYERYVNMKN 64
+E +K+ ++Q + +++ LE K + LE+ + ++ N Q + KN
Sbjct: 250 KEMQDKILKLQEEXSHEIEELEKRKDKETGGILRSLEDALAEAQRINTKSQSAFDLKKKN 309
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTV-EKKGKESNVIGS-KFRWSVF 122
L E K +++E+ + + +++ E++ L + E K++ + + + ++
Sbjct: 310 LASEENKRKELEKNMVEDSKTLAAKEKEVKKITDGLNALQEASNKDAEALAAAQQHFNAV 369
Query: 123 SAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
SA D A++ L + + K A EA ++ Q L + + T V M
Sbjct: 370 SAGLSSNEDGAEATLAGQMMACKNDISK-AQTEA--KQAQMKLKHAQQELKTKQTEVKKM 426
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM-----QTSRSNNRLIDFVMQL 237
+S + + L + + + KL +++KL E K ES+ Q SR +RL + L
Sbjct: 427 DSGYRKDQEALEAVKKLKEKLEAEMKKLNYE-ENKEESLLEKRRQLSRDISRLKETYEAL 485
Query: 238 KSE--N-RVSXXXXXXXXXXXXXQKYDIAVSTA----CGALNY-IVTETVEAGEAVIAAV 289
+ N R + DI+ +TA G Y +V +T G+ ++
Sbjct: 486 LARFPNLRFAYRDPEKGLVASLISVKDISATTALELVAGDRLYNVVVDTEVTGKKLLE-- 543
Query: 290 KRQNVGRVNVIPLDKMQQ--YHSQCYDKYRT---PENVPRLIDLIQVQDEKIRLAFYFAT 344
K + R +IPL+K+ + +T P NV + L++ + E ++ A F
Sbjct: 544 KGELKRRYTIIPLNKISTRCIXPETLKIAQTLVGPNNVHVALSLVEYKPE-LQKAMEFVF 602
Query: 345 RETLVAQDLNQAKRIGYSGGGY-RMVTLEGAIIEPSETLVAQDLNQAKRI 393
T V +++ AK+I + R VTL G + +P TL +QA I
Sbjct: 603 GTTFVCDNMDNAKKIAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASI 652
Score = 96 (38.9 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 415 TLVAQDLNQAKRIGYSGGGY-RMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTS 473
T V +++ AK+I + R VTL G + +P GT+SGG + ++ T +
Sbjct: 605 TFVCDNMDNAKKIAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASIL----TKFQELK 660
Query: 474 LVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
V+D L +KE L +LE EL L + E QL + + K +E D
Sbjct: 661 DVQDELRIKENELQALEEELAHL-KNTAEKYRQLK---QQWEMKTEEAD 705
Score = 53 (23.7 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 15/57 (26%), Positives = 34/57 (59%)
Query: 479 EVKEKRLASLETEL-RIL--SQQKME-VETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
EV E ++ + E E R L +Q+K++ +T+ + + ++K K+QE + ++++ K
Sbjct: 752 EVLENKMKNAEAERERELKDAQRKLDSAKTKADASSKKMKEKQQEVEAITLELEELK 808
Score = 49 (22.3 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/48 (22%), Positives = 28/48 (58%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTC 523
++L+ +++L S +T+ S++ E + ++ EL+ K+E+ +C
Sbjct: 767 RELKDAQRKLDSAKTKADASSKKMKEKQQEVEAITLELEELKREHASC 814
>ASPGD|ASPL0000004872 [details] [associations]
symbol:smcB species:162425 "Emericella nidulans"
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000796 "condensin
complex" evidence=IEA] [GO:0000939 "condensed chromosome inner
kinetochore" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
EMBL:BN001301 GO:GO:0006310 GO:GO:0030261 EMBL:AACD01000101
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 HOGENOM:HOG000163792 OMA:CQNGKIP
OrthoDB:EOG4P2T9B RefSeq:XP_663503.1 ProteinModelPortal:Q5B0N1
STRING:Q5B0N1 EnsemblFungi:CADANIAT00007134 GeneID:2870708
KEGG:ani:AN5899.2 Uniprot:Q5B0N1
Length = 1179
Score = 168 (64.2 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 108/530 (20%), Positives = 223/530 (42%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE 69
++ K + Q +E ++KA EL + +L+ + E + E ++K+L
Sbjct: 289 DKELRKGGKFQALEDEVKAHSHELVRLTTVFDLKKASIAEEKEKSK-ELQKSVKDLETSL 347
Query: 70 TKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFE 129
+ +++ +L A ++ K D ++A+ E K + ++ V + + S + + +
Sbjct: 348 KEKKKIYDKLQAEYDAAKAELDA-QTAEVEQKEELLQTLQTGVASKEGQESGYQGQLQ-- 404
Query: 130 CDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAES 189
D A++ + Q + K+A LE +++ + + K L + ++S+ +
Sbjct: 405 -D-ARNRASNAATEQEQAKLKIAHLEKRIKEEEPRAKKAKEQNSGLLKELEGLKSQAKKL 462
Query: 190 RARLADLT----REEAKLLDQ--VEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
L+ L REE +Q ++K RE+ ++ + +Q +N I+F N
Sbjct: 463 EYELSKLGFEPGREEQLYQEQSGLQKEIRELRQRADGLQRKVAN---IEFNYSDPYPNFD 519
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTA---C--GALNYIVTETVEAGEAVIAAVKRQNVGRVN 298
K + +TA C G L +V ++ + G ++ K + RV
Sbjct: 520 RSKVKGLVAQLFTVDKEKLQAATALEICAGGRLYNVVVDSSDTGTQLLQKGKLRK--RVT 577
Query: 299 VIPLDKMQQYHSQCYDKYRTPENV-PRLIDL-IQV--QDEKIRLAFYFATRETLVAQDLN 354
+IPL+K+ + + +K +N+ P +DL + + DE+I A + TL+A D
Sbjct: 578 IIPLNKISAFRASV-EKIGAAQNLAPGKVDLALSLIGYDEEITAAMNYVFGNTLIANDAE 636
Query: 355 QAKRIGYSGG-GYRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPS 413
AKR+ + + VTL+G + +PS TL + + + +T E I
Sbjct: 637 TAKRVTFDPSVRIKSVTLDGDVYDPSGTLSGGSAPNSSGVLVTLQKLNEITRE--IRSKE 694
Query: 414 ETLVAQD---LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNP--IRGLMGRKATV 468
L A + + K++ + + L+ I+ + GG S+ I+ + KA +
Sbjct: 695 RVLAALEETMKKEKKKLDAVRSIKQELDLKNHEIKLTEEQIGGNSSSSIIQAVEEMKANI 754
Query: 469 STDTSLVKDLEVKE----KRLASLETELRILSQQKMEVETQLNCTGNELK 514
+ D ++++ K + +E ++R + K +L T N LK
Sbjct: 755 EQLKQNISDAKLRQSEASKDIKRIEKDMREFNNNKDSKLEELQTTLNALK 804
Score = 123 (48.4 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 30/110 (27%), Positives = 63/110 (57%)
Query: 415 TLVAQDLNQAKRIGYSGG-GYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTS 473
TL+A D AKR+ + + VTL+G + +PSGT+SGG + G++ T+
Sbjct: 629 TLIANDAETAKRVTFDPSVRIKSVTLDGDVYDPSGTLSGGSAPNSSGVL---VTLQKLNE 685
Query: 474 LVKDLEVKEKRLASLETELRILSQQKME----VETQLNCTGNELKYKKQE 519
+ +++ KE+ LA+LE ++ ++K++ ++ +L+ +E+K +++
Sbjct: 686 ITREIRSKERVLAALEETMK-KEKKKLDAVRSIKQELDLKNHEIKLTEEQ 734
Score = 101 (40.6 bits), Expect = 2.8e-09, Sum P(2) = 2.8e-09
Identities = 46/212 (21%), Positives = 92/212 (43%)
Query: 22 VETDLKALEPELRKAVNFLELENCVQRKHNEI--YQYERYVN-MKNLGEHETKVQQMEQE 78
+E L+ L E R ++F + +N ++R + + Y R + ++ GE K ++ Q
Sbjct: 203 IEPKLEKLRAEKRAFLDFQQTQNDLERLTRLVVAHDYLRSGDRLRASGEECEKKKRKIQA 262
Query: 79 LTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTR-FECDIAKSEL 137
L N +K ME +K V K G KF+ K E +
Sbjct: 263 LEDNTAKLKSEIAHMEEDVKRVKAVRDKELRK---GGKFQALEDEVKAHSHELVRLTTVF 319
Query: 138 EIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLT 197
++ ++ ++E +K +L+ +++ ++T+L E+K + ++L A ++E+ A +
Sbjct: 320 DLKKASIAEEKEKSKELQKSVKDLETSLKEKKKIYDKLQAEYDAAKAELDAQTAEVEQ-- 377
Query: 198 REEAKLLDQVEKLAREVSEKRESMQTSRSNNR 229
+EE Q ++E E Q + NR
Sbjct: 378 KEELLQTLQTGVASKEGQESGYQGQLQDARNR 409
Score = 44 (20.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 14/38 (36%), Positives = 24/38 (63%)
Query: 482 EKRLASLETELRILSQQKMEVE-TQLNCTGNELKYKKQ 518
EK+ A+L+ +R + + K ++E T +N NE YKK+
Sbjct: 997 EKKEAALKNMMRTVIRDKSKIEETIINL--NE--YKKE 1030
Score = 44 (20.5 bits), Expect = 3.0e-08, Sum P(2) = 3.0e-08
Identities = 17/59 (28%), Positives = 31/59 (52%)
Query: 465 KATVSTDTSLVKDL--EVKEKRLASLE--TELRILSQQKMEVETQLNCTGNELKYKKQE 519
K ++S + + VK+L E++ RL S + ++L +Q E E+ L E+ K+E
Sbjct: 804 KKSLSKNLTSVKNLHKELQASRLESEQVGSDLSAAEEQYAESESTLKAQLEEVDSLKRE 862
Score = 37 (18.1 bits), Expect = 1.6e-07, Sum P(2) = 1.6e-07
Identities = 15/61 (24%), Positives = 27/61 (44%)
Query: 464 RKATVSTDTSLV-KDLEV----KEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
R++ S D + KD+ K+ +L L+T L L + + T + EL+ +
Sbjct: 767 RQSEASKDIKRIEKDMREFNNNKDSKLEELQTTLNALKKSLSKNLTSVKNLHKELQASRL 826
Query: 519 E 519
E
Sbjct: 827 E 827
>UNIPROTKB|Q71YL3 [details] [associations]
symbol:smC "Chromosome partition protein Smc"
species:265669 "Listeria monocytogenes serotype 4b str. F2365"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR024704
HAMAP:MF_01894 InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE017262
GenomeReviews:AE017262_GR GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529
TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_014424.1
ProteinModelPortal:Q71YL3 STRING:Q71YL3 GeneID:2797604
KEGG:lmf:LMOf2365_1831 PATRIC:20324957 ProtClustDB:CLSK2518461
Uniprot:Q71YL3
Length = 1186
Score = 138 (53.6 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 84/375 (22%), Positives = 159/375 (42%)
Query: 21 LVETD-LKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQEL 79
LVET+ L+ LE E L+LE ++KH+ + + + E T +++ ++ L
Sbjct: 291 LVETEKLEQLEGERN-----LQLE---RKKHSSENEQVYAETLAAITEKITALEEQKEVL 342
Query: 80 TANLESIKKCTDEMESAKSELK-TVEKKG--KESNVIGSKFRW-SVFSAKTRFECDIAKS 135
+++ + + AK EL+ T+ K E + K + + +T D+
Sbjct: 343 SSSKLEKETALEIAVKAKKELEVTLAKYDDLSEEAIENRKSDYIDLRHTQTTINNDLGYI 402
Query: 136 ELEIFLSTQS------KETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAES 189
E +I T + + + D + L +++TT T + ELT ++ E+ ++
Sbjct: 403 ERQIGQITSRIDKLDLENSHHIDDRKDMLAQIETTKTHLTKIQSELTEQMEIYR-EVQQT 461
Query: 190 RARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNR-LIDFVMQ-LKSENRVSXXX 247
A+ + + + L + + +++ ++E+++ + V + LK++ +
Sbjct: 462 LAKQEAVFGTQERALYKHYETVQQMKSRKETLEELADDYAGFFQGVREVLKAKKEIPGIL 521
Query: 248 XXXXXXXXXXQKYDIAVSTACGAL--NYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDKM 305
KY A+ TA GA N +V + A EA I+ +K+ GR +PL +
Sbjct: 522 GALVELVEIPAKYQQAMETALGASAQNVVVEDDRVAREA-ISFLKKTKSGRATFLPLSTI 580
Query: 306 QQYHSQCYDKYRTPENVPRLIDLIQVQ---DEKIRLAFYFATRETLVAQDLNQAKRIG-Y 361
Q K N P I L DEK+ A T++A+DL A +
Sbjct: 581 QPRELPAATK-NALSNQPAFIALASEVISFDEKVSPVILNALGTTILAKDLKGANTLARL 639
Query: 362 SGGGYRMVTLEGAII 376
YR+VTLEG ++
Sbjct: 640 VNFRYRIVTLEGDVV 654
Score = 85 (35.0 bits), Expect = 3.1e-09, Sum P(2) = 3.1e-09
Identities = 25/108 (23%), Positives = 56/108 (51%)
Query: 415 TLVAQDLNQAKRIG-YSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRG-LMGRKATVSTDT 472
T++A+DL A + YR+VTLEG ++ G+M+GG + + ++ RK +
Sbjct: 624 TILAKDLKGANTLARLVNFRYRIVTLEGDVVNAGGSMTGGATKGGKSSILTRKHELGQLA 683
Query: 473 SLVKDLEVKEKRLAS-LETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+ +L + + S ++ +++++ E+E + G L+ +++E
Sbjct: 684 EKITELNEATREMESAVQLAKDSMAKKREELE-ETRGIGENLRLQEKE 730
Score = 50 (22.7 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 12/31 (38%), Positives = 19/31 (61%)
Query: 381 TLVAQDLNQAKRIG-YSGGGYRMVTLEGAII 410
T++A+DL A + YR+VTLEG ++
Sbjct: 624 TILAKDLKGANTLARLVNFRYRIVTLEGDVV 654
Score = 44 (20.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 29/151 (19%), Positives = 56/151 (37%)
Query: 375 IIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQAK-RIGYSGGG 433
++E ETL+ + + AK+I + + +T +E + L+ K +I
Sbjct: 766 LLERKETLLHEQVEIAKQIEATDEEIKAMTSSSKALESKRAADLESLSSLKAQIAAKREQ 825
Query: 434 YRMVT--LEGAI--IEPSGTMSGGGSNPIRGLMGRKATVST-DTSLVKDLEVKEKRLASL 488
+ T +E + + + L +V T + S K +E K A
Sbjct: 826 LQSATEAVERVTTTLHENYEQKEAAEQKLASLKTNLTSVHTSEESARKSIEELRKDKAET 885
Query: 489 ETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+L Q + E++ +L EL K +
Sbjct: 886 SEKLAQTRQTRAELQEKLELLEAELTQKNNQ 916
Score = 37 (18.1 bits), Expect = 4.8e-05, Sum P(3) = 4.8e-05
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 467 TVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQL 506
T T L + LE+ E L ++ +QK E +
Sbjct: 892 TRQTRAELQEKLELLEAELTQKNNQISFYVEQKNNAEISI 931
>TIGR_CMR|BA_3986 [details] [associations]
symbol:BA_3986 "chromosome segregation SMC protein"
species:198094 "Bacillus anthracis str. Ames" [GO:0005524 "ATP
binding" evidence=ISS] [GO:0007059 "chromosome segregation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 EMBL:AE016879 EMBL:AE017334 EMBL:AE017225
GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0003677 GO:GO:0006260 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
OMA:CQNGKIP HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 RefSeq:NP_846228.1 RefSeq:YP_020625.1
RefSeq:YP_029950.1 ProteinModelPortal:Q81WI9 IntAct:Q81WI9
DNASU:1086762 EnsemblBacteria:EBBACT00000012710
EnsemblBacteria:EBBACT00000015269 EnsemblBacteria:EBBACT00000024406
GeneID:1086762 GeneID:2817444 GeneID:2848221 KEGG:ban:BA_3986
KEGG:bar:GBAA_3986 KEGG:bat:BAS3699 ProtClustDB:CLSK873325
BioCyc:BANT260799:GJAJ-3757-MONOMER
BioCyc:BANT261594:GJ7F-3874-MONOMER Uniprot:Q81WI9
Length = 1189
Score = 164 (62.8 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 97/416 (23%), Positives = 179/416 (43%)
Query: 1 MEVLYGKYD--EERTEKLTRVQLVET-DLKALEP--ELRKAVNFLELENCVQRKHNEIYQ 55
+E L G+ +E + L V L+ + +L+ LE EL K +C Q + +
Sbjct: 269 LEELRGQLQAVDESVDSLQEVLLLSSKELEKLEGQRELLKERKQNATTHCAQLEQLIVEL 328
Query: 56 YERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGS 115
E+ + GE E+ + + Q + E K D + + +E++ + N+ G
Sbjct: 329 TEKATSYD--GEIESSTEVLMQFVNHVKELEMKLHDNEQLLATFADNLEEQIE--NLKGD 384
Query: 116 KFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLC--- 172
A R E + + + + Q+ + ++L + A +++ +T +KT
Sbjct: 385 YIELLNQQASHRNELSMIEEQSK----QQNSKNERLDEENAKYVEMRMEITAKKTKLVES 440
Query: 173 -EELTTRVPAMESEIAESRARL----ADLTREEAKLLD--QVEKLAREVSEKRESMQTSR 225
E++ +V + S I ++ A L A + E KL Q + AR E E MQ
Sbjct: 441 YEQVKEKVAGILSNIQKTEAALGKCKAQYSENETKLYQAYQFVQQARSRKEMLEEMQEDY 500
Query: 226 SN-NRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGE 283
S + + V++ + ENR+ ++Y+IA+ A GA + +IV + E
Sbjct: 501 SGFYQGVREVLKAR-ENRLQGIEGAVAELLTVPKEYEIAMEIALGAAMQHIVVQKEEHAR 559
Query: 284 AVIAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLI----DLIQVQDEKIRLA 339
IA +K+ GR +P M+ S +++ R P + +L+Q + K
Sbjct: 560 NAIAFLKQNKHGRATFLPQAVMKG-RSLSFEQLRIVNQHPSFVGVAAELVQYNN-KYENV 617
Query: 340 FYFATRETLVAQDL---NQ-AKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQAK 391
+VA+DL N+ AK++ Y YR+VT+EG ++ P ++ + QAK
Sbjct: 618 VSNLLGTVIVAKDLRGANELAKQLQYR---YRIVTIEGDVVNPGGSMTGGAVKQAK 670
Score = 118 (46.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 35/119 (29%), Positives = 64/119 (53%)
Query: 390 AKRIGYSGGGYRMVT-LEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSG 448
A+ + Y+ +V+ L G +I + A +L AK++ Y YR+VT+EG ++ P G
Sbjct: 605 AELVQYNNKYENVVSNLLGTVIVAKDLRGANEL--AKQLQYR---YRIVTIEGDVVNPGG 659
Query: 449 TMSGGGSNPIRG-LMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQL 506
+M+GG + L+GR+ + T+ + D+E K +L E ++ + Q+ E E Q+
Sbjct: 660 SMTGGAVKQAKSSLLGRQRELEEWTNKLTDMEEKTTKL---ENFVKAVKQEIQEKEVQI 715
Score = 79 (32.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 54/227 (23%), Positives = 100/227 (44%)
Query: 11 ERTEKLTRVQLVETDLKALEPELRKAVNFLE----LENCVQR---KHNEIYQYERYVNMK 63
E++ K R +E D+ + R+AVN E L N QR ++NE+ R +
Sbjct: 50 EQSAKSLRGAKME-DIIFAGSDTRRAVNVAEVTITLNNEDQRLPIEYNEVCVTRR---VS 105
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKS-ELKTVEKKGKESNVIGSKFRWSVF 122
G+ + + + L ++ M+S E ++ +GK ++ SK
Sbjct: 106 RSGDSDFYINKQSCRLKDIIDLF------MDSGMGREAFSIISQGKVEEILSSK------ 153
Query: 123 SAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
S + R + A L+ L + E+K LAD + NL +VQ + E + E L R ++
Sbjct: 154 SEERRGVFEEAAGVLKYKLRKKKAESK-LADTQENLNRVQDIIHELSSQVEPLE-RQASI 211
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNR 229
+ E + L + E A ++ ++E E+ EK E+++ +N+
Sbjct: 212 AKDYLEKKEELEKV--EAALIVHEIE----ELHEKWEALRNQFGHNK 252
Score = 57 (25.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 16/56 (28%), Positives = 32/56 (57%)
Query: 465 KATVSTDTSLVKDLEV-KEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
K V + + +K L K++RL++ + ++ L+++K E + L T +L + KQE
Sbjct: 806 KEKVQKEMTELKVLAAEKQQRLSNQKEKVERLTKEKEETDATLVKTKEDLAFLKQE 861
Score = 47 (21.6 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
Identities = 14/48 (29%), Positives = 24/48 (50%)
Query: 481 KEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
KEK + TEL++L+ +K + + L +K+E D L+ K
Sbjct: 806 KEKVQKEM-TELKVLAAEKQQRLSNQKEKVERLTKEKEETDATLVKTK 852
Score = 41 (19.5 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVET 504
L K L + + L++++ L+QQK E T
Sbjct: 774 LEKILATLQAEITGLDSKIVALTQQKSEQHT 804
>ZFIN|ZDB-GENE-040426-57 [details] [associations]
symbol:smc1al "structural maintenance of chromosomes
1A, like" species:7955 "Danio rerio" [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
ZFIN:ZDB-GENE-040426-57 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
HOVERGEN:HBG039593 KO:K06636 OrthoDB:EOG4HX507
GeneTree:ENSGT00580000081569 EMBL:CR376802 EMBL:CT025883
EMBL:AY648730 IPI:IPI00501499 RefSeq:NP_997975.2 UniGene:Dr.76942
STRING:Q6DRM9 Ensembl:ENSDART00000081016 GeneID:403060
KEGG:dre:403060 CTD:403060 InParanoid:Q6DRM9 OMA:NIGEVAN
NextBio:20816857 Uniprot:Q6DRM9
Length = 1233
Score = 181 (68.8 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 93/399 (23%), Positives = 175/399 (43%)
Query: 20 QLVETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQE 78
Q++E ++K + EL +K +++ + K ++ + +++N + K + E
Sbjct: 278 QMIEKEIKEKDAELNQKRPLYIKAKENTAHKIKKLEAARK--SLQNAQKCYKKRKGDMDE 335
Query: 79 LTANLESIKKCTDEMESAKSELKTVEKKGK----ESNVIGSKFRWSVFSAKTRFECDIAK 134
L +++ E E E + +G+ E N + + R ++K +A+
Sbjct: 336 LDREQGAVEMARQEFEERMEE--EAQSQGQDLQLEENQVKAYHRLKEEASKRA--ATLAQ 391
Query: 135 SELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--CEELTTRVPAMESEIAESRAR 192
ELE F Q + +L DLE +K++T ++ + EE R+ +E I SR
Sbjct: 392 -ELEKFNRDQKADQDRL-DLEER-KKIETEAKIKQKIREIEENQKRIEKLEDYITTSRQS 448
Query: 193 LADLTREEAKLLDQVEKLAR-------EVSEKRESMQTSR----SNNRLIDFVMQLKSEN 241
L + R E +L ++VE+ R E+++ E + +R N+R L+S
Sbjct: 449 LDEQKRMEEELTEEVEQAKRRIDEINMELNQVMEQLGDARIDRQENSRQQRKAEILESIK 508
Query: 242 RV---SXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGRV 297
R+ S +KY IAV+ G ++ I+ ++ + G I +K Q
Sbjct: 509 RLYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPE 568
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
+PLD ++ + +K R +ID+I+ + +I+ A +A LV ++ A+
Sbjct: 569 TFLPLDYLEVKPTD--EKLRELRGAKLVIDVIRYEPPQIKKALQYACGNALVCDNVEDAR 626
Query: 358 RIGYSGGGYR--MVTLEGAIIEPSETLV--AQDLNQAKR 392
RI + GG YR V L+G + + S + A DL R
Sbjct: 627 RIAF-GGPYRHKTVALDGTLFQKSGVISGGASDLKAKAR 664
Score = 39 (18.8 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 7/25 (28%), Positives = 16/25 (64%)
Query: 495 LSQQKMEVETQLNCTGNELKYKKQE 519
++++++E ETQ +L Y+K +
Sbjct: 803 IAKKRLEFETQKTRLAIQLDYEKNQ 827
Score = 39 (18.8 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 9/30 (30%), Positives = 16/30 (53%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
++E K+L EL L ++ +ET+L
Sbjct: 890 EMEEIRKKLGGANKELTQLQKEVTAIETKL 919
>CGD|CAL0000340 [details] [associations]
symbol:SMC2 species:5476 "Candida albicans" [GO:0003680 "AT
DNA binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0000939 "condensed chromosome inner kinetochore" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000799 "nuclear condensin complex" evidence=IEA]
[GO:0070058 "tRNA gene clustering" evidence=IEA] [GO:0007076
"mitotic chromosome condensation" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0000340
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:AACQ01000103 EMBL:AACQ01000102
KO:K06674 PANTHER:PTHR18937:SF9 RefSeq:XP_714465.1
RefSeq:XP_714514.1 ProteinModelPortal:Q59Y26 STRING:Q59Y26
GeneID:3643867 GeneID:3643918 KEGG:cal:CaO19.11106
KEGG:cal:CaO19.3623 Uniprot:Q59Y26
Length = 1171
Score = 169 (64.5 bits), Expect = 7.4e-09, P = 7.4e-09
Identities = 107/533 (20%), Positives = 216/533 (40%)
Query: 7 KYDEERTE-KLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKN- 64
K + +T+ + +++ E L L A + + ++N + K+ E+ +K
Sbjct: 288 KEENLKTDGSMKELEIKENQLSNDLTRLNTARD-IAMDNLTEEKNKHTKLIEQLEQIKQQ 346
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
L ++T E E + + + + +E + + L T+ + + S + +
Sbjct: 347 LASNQTVFDNQENEYKQSNQELVQLKEEYANKQELLSTLSTGISSTGNVTSGYTTQLNDV 406
Query: 125 KTRFECD---IAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
K++ I S L+I Q E+ ++ +A E +T L+ + + + T+
Sbjct: 407 KSKLNASENFIKTSTLKINHLQQQMESDQMKLTKAKTEN-ETLLSAIELHRQFIKTKQLE 465
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSE-KRESMQTSRSNNRLI-DFVMQLKS 239
++S++ ++ L +E++L+ Q K ++++ +RE NR DF QL
Sbjct: 466 IDSKLGFEPTKIHQLRDQESELISQQNKFNQQLNHMRREIGNLDFQYNRPSRDFNDQL-- 523
Query: 240 ENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNY-IVTETVEAGEAVIAAVKRQNVGRVN 298
V +A+ G Y +V +T + ++ K Q RV
Sbjct: 524 ---VRGVVAQLFNLPETSHDKALALQVCAGGRLYNVVVDTSDVASQLLE--KGQLKRRVT 578
Query: 299 VIPLDKMQQY---HSQC-YDKYRTPENVPRLIDLIQVQDEKIR-LAFYFATRETLVAQDL 353
+IPLDK+ H Y K P V ++LI +DE + + + F T T + D
Sbjct: 579 IIPLDKISSRKLDHQVIDYAKQVAPGKVDLALNLIDFEDELYKAMEYIFGT--TFICNDP 636
Query: 354 NQAKRIGYSGG-GYRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEP 412
N AK + + R +TLEG I +P L I Y +T++ IE
Sbjct: 637 NSAKAVTFDPKIKSRSITLEGDIYDPEGNLSGGSRRNNSTILLKLQQYNKLTIQLKKIEF 696
Query: 413 SETLVAQDLNQAKRIGYSGGGYRM-VTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTD 471
V Q+L++ + S + + L+ E S +NP ++ + +
Sbjct: 697 ELQNVKQELSRMDSLISSTRTIQNEINLKRH--ELSLLEKKLENNPAALILKQNDLNQQE 754
Query: 472 T-SLVKDLEVKEKRLASLETELRILSQQKMEVE----TQLNCTGNELKYKKQE 519
L +++E+ +++ + E+ I+ + E +++NC E+ + KQ+
Sbjct: 755 IIRLTEEIEITKEKCRQYKQEIAIIEKDIAEFNNDKGSKINCLKKEVAHLKQQ 807
>FB|FBgn0040283 [details] [associations]
symbol:SMC1 "SMC1" species:7227 "Drosophila melanogaster"
[GO:0003677 "DNA binding" evidence=ISS] [GO:0008278 "cohesin
complex" evidence=ISS;IDA;NAS] [GO:0007062 "sister chromatid
cohesion" evidence=ISS;NAS] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IGI] [GO:0005694 "chromosome" evidence=IDA] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0016319 "mushroom body
development" evidence=IMP] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0035327 "transcriptionally active chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005700
"polytene chromosome" evidence=IDA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0006281 GO:GO:0016322 GO:GO:0048813 GO:GO:0006310
GO:GO:0016319 GO:GO:0010629 GO:GO:0030261 GO:GO:0005700
GO:GO:0035327 GO:GO:0008278 GO:GO:0007062 SUPFAM:SSF75553
HSSP:Q9X0R4 EMBL:AF225909 EMBL:AJ271845 STRING:Q9N6I4
FlyBase:FBgn0040283 InParanoid:Q9N6I4 OrthoDB:EOG4QNKB0
Uniprot:Q9N6I4
Length = 1238
Score = 171 (65.3 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 76/398 (19%), Positives = 175/398 (43%)
Query: 15 KLTR-VQLVETDLKALEPELRKAVN-FLELENCVQRKHNEIYQYERYVNMKNLGE--HET 70
K+TR + ++ +++ E ++ K +++ + V ++ ++ + + H++
Sbjct: 295 KITRDLAKIDQEIREFETQMNKRRPLYIKAKEKVTHCKKKLISLQKTLETAREADNAHQS 354
Query: 71 KVQQMEQELTANLESIKK-CTDEMESAKSEL-KTVE-KKGKESNVIGSKFRWSVFSAKTR 127
++++E++L A++E++KK DE+E+ K+V ++G K + + R
Sbjct: 355 DIRKLEKQL-ADVEALKKRFEDEIENESQRRGKSVNMEEGLVQEYDRLKQEAEATATQYR 413
Query: 128 FECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIA 187
E D E + T ET + A +E + +K+ E ++L + + ++ +
Sbjct: 414 SELDSVNREQKSEQDTLDGETNRRASVEESFKKLTLQREEAVKRRDKLMDHIKSSQAALE 473
Query: 188 ESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNN------RLIDFVMQLKSEN 241
E +L R+ +++ + RE+ + R+ + ++S+ + V++L +
Sbjct: 474 EQNRIKDELRRDVGTSKEKIAEKQRELEDVRDQLGDAKSDKHEDARRKKKQEVVELFKKQ 533
Query: 242 RVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++Y++AV+ G + I+ +T + I +K Q + +
Sbjct: 534 VPGVYDRMINMCQPTHKRYNVAVTKVLGKFMEAIIVDTEKTARHCIQILKEQMLEVETFL 593
Query: 301 PLDKMQ-QYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRI 359
PLD +Q + + P NV + D+++ + ++I A FAT LV + A ++
Sbjct: 594 PLDYLQVKPLKERLRNISDPRNVRLVFDVLKFEPQEIERAVLFATGNALVCETPEDAMKV 653
Query: 360 GYSGGGYRM--VTLEGAIIEPSETLV--AQDL-NQAKR 392
Y R + L+G + S + + DL +AKR
Sbjct: 654 AYEIDRSRFDALALDGTFYQKSGLISGGSHDLARKAKR 691
Score = 47 (21.6 bits), Expect = 7.8e-09, Sum P(2) = 7.8e-09
Identities = 13/48 (27%), Positives = 29/48 (60%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
VK++ E+R ++ E ++++ E E Q++ ++L ++KQ+ DT
Sbjct: 811 VKNIRQYEERELVMQQER---ARKRAEFEQQIDSINSQLDFEKQK-DT 854
>UNIPROTKB|C9JR83 [details] [associations]
symbol:SMC4 "Structural maintenance of chromosomes protein
4" species:9606 "Homo sapiens" [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0051383 "kinetochore organization"
evidence=IEA] InterPro:IPR003395 Pfam:PF02463 EMBL:AC024221
HGNC:HGNC:14013 HOGENOM:HOG000201987 IPI:IPI00947372
ProteinModelPortal:C9JR83 SMR:C9JR83 STRING:C9JR83
Ensembl:ENST00000489573 ArrayExpress:C9JR83 Bgee:C9JR83
Uniprot:C9JR83
Length = 423
Score = 162 (62.1 bits), Expect = 9.1e-09, P = 9.1e-09
Identities = 50/153 (32%), Positives = 80/153 (52%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E R EKL RV++VE + ALE E A+ FL LEN + RK N + QY Y K + E
Sbjct: 278 NEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFRKKNHVCQYYIYELQKRIAEM 337
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
ET+ +++ ++ E ++EM++ ++K EKK N I +KF + K +F
Sbjct: 338 ETQKEKIHEDTKEINEKSNILSNEMKAKNKDVKDTEKK---LNKI-TKF---IEENKEKF 390
Query: 129 -ECDIAKSELEIFLSTQSKETKKLADLEANLEK 160
+ D+ ++ L + + KKL E L+K
Sbjct: 391 TQLDLEDVQVREKLKHATSKAKKL---EKQLQK 420
>RGD|1306680 [details] [associations]
symbol:Smc4 "structural maintenance of chromosomes 4"
species:10116 "Rattus norvegicus" [GO:0000796 "condensin complex"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0007076 "mitotic chromosome
condensation" evidence=ISO] [GO:0010032 "meiotic chromosome
condensation" evidence=ISO] [GO:0045132 "meiotic chromosome
segregation" evidence=ISO] [GO:0046982 "protein heterodimerization
activity" evidence=ISO] [GO:0051383 "kinetochore organization"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003395 Pfam:PF02463 RGD:1306680 eggNOG:COG1196
HOGENOM:HOG000184777 OrthoDB:EOG4PZJ5V IPI:IPI00372213
UniGene:Rn.163695 EMBL:BC107944 ProteinModelPortal:Q32PX5
STRING:Q32PX5 UCSC:RGD:1306680 HOVERGEN:HBG082271 InParanoid:Q32PX5
Genevestigator:Q32PX5 Uniprot:Q32PX5
Length = 434
Score = 162 (62.1 bits), Expect = 9.6e-09, P = 9.6e-09
Identities = 49/155 (31%), Positives = 82/155 (52%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E R EKL RV++VE + ALE E A+ FL LEN + +K N I QY Y + E
Sbjct: 276 NEHRGEKLNRVKMVEKEKDALEGEKNIAIEFLTLENEIFKKKNHICQYYIYDLQNRIAEM 335
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
+T+ +++ ++ E ++EM++ S +K +EKK N + +KF + K +F
Sbjct: 336 KTQKEKIHEDTKEITEKSNVLSNEMKAKNSAVKDIEKK---LNKV-TKF---IEQNKEKF 388
Query: 129 -ECDIAKSELEIFLSTQSKETKKLA-DLEANLEKV 161
+ D+ ++ L + + KKL L+ + EKV
Sbjct: 389 TQLDLEDVQVREKLKHATSKAKKLEKQLQKDKEKV 423
>TAIR|locus:2167973 [details] [associations]
symbol:SMC2 "AT5G62410" species:3702 "Arabidopsis
thaliana" [GO:0005215 "transporter activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] [GO:0000796 "condensin
complex" evidence=ISS] [GO:0000911 "cytokinesis by cell plate
formation" evidence=RCA] [GO:0006260 "DNA replication"
evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006270 "DNA replication initiation"
evidence=RCA] [GO:0006275 "regulation of DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0008283 "cell proliferation" evidence=RCA] [GO:0009909
"regulation of flower development" evidence=RCA] [GO:0010267
"production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0010389 "regulation of G2/M transition of mitotic
cell cycle" evidence=RCA] [GO:0016458 "gene silencing"
evidence=RCA] [GO:0016570 "histone modification" evidence=RCA]
[GO:0031047 "gene silencing by RNA" evidence=RCA] [GO:0031048
"chromatin silencing by small RNA" evidence=RCA] [GO:0034968
"histone lysine methylation" evidence=RCA] [GO:0035196 "production
of miRNAs involved in gene silencing by miRNA" evidence=RCA]
[GO:0048449 "floral organ formation" evidence=RCA] [GO:0051567
"histone H3-K9 methylation" evidence=RCA] [GO:0051607 "defense
response to virus" evidence=RCA] [GO:0051726 "regulation of cell
cycle" evidence=RCA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0007126 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0051301
GO:GO:0007067 GO:GO:0006281 GO:GO:0005215 GO:GO:0006310
GO:GO:0030261 EMBL:AB015469 EMBL:AB019235 GO:GO:0000796
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:AF271730 EMBL:AF271731 EMBL:AF306547
IPI:IPI00534765 RefSeq:NP_201047.1 UniGene:At.19029 HSSP:P32908
ProteinModelPortal:Q9C5Y4 SMR:Q9C5Y4 STRING:Q9C5Y4 PaxDb:Q9C5Y4
PRIDE:Q9C5Y4 EnsemblPlants:AT5G62410.1 GeneID:836362
KEGG:ath:AT5G62410 TAIR:At5g62410 HOGENOM:HOG000163792
InParanoid:Q9C5Y4 OMA:CQNGKIP PhylomeDB:Q9C5Y4
ProtClustDB:CLSN2685173 Genevestigator:Q9C5Y4 Uniprot:Q9C5Y4
Length = 1175
Score = 133 (51.9 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 85/336 (25%), Positives = 146/336 (43%)
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSK 116
ER +K E ++Q QEL+ LE +K + + KS E+K E + +K
Sbjct: 347 ERAAAVKKSEEGAADLKQRFQELSTTLEECEKEHQGVLAGKSSGD--EEKCLEDQLRDAK 404
Query: 117 FRWSVFSAKTRFECDIAKSELEIFLSTQSKETKK--LADLEANLEKVQTTLTERKTLCEE 174
+V +A T E K+++E + KE K ++ LE +E V+ L RK E
Sbjct: 405 I--AVGTAGT--ELKQLKTKIE-HCEKELKERKSQLMSKLEEAIE-VENELGARKNDVEH 458
Query: 175 LTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFV 234
+ A+ES I + ++ L ++ L+ V++L +V + S Q + D V
Sbjct: 459 VKK---ALES-IPYNEGQMEALEKDRGAELEVVQRLEDKV--RGLSAQLANFQFTYSDPV 512
Query: 235 MQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVI--AAVKRQ 292
++V + V TA G L +V ++ + G+ ++ A++R
Sbjct: 513 RNF-DRSKVKGVVAKLIKVKDRSSMTALEV-TAGGKLYDVVVDSEDTGKQLLQNGALRR- 569
Query: 293 NVGRVNVIPLDKMQQYHSQCYDKYRTP-----ENVPRLIDLIQVQDEKIRLAFYFATRET 347
RV +IPL+K+Q Y Q + T +N + L+ DE ++ A + T
Sbjct: 570 ---RVTIIPLNKIQSYVVQPRVQQATARLVGKDNAELALSLVGYSDE-LKNAMEYVFGST 625
Query: 348 LVAQDLNQAKRIGYSGG-GYRMVTLEGAIIEPSETL 382
V + + AK + ++ VTLEG I +PS L
Sbjct: 626 FVCKTTDVAKEVAFNRDIRTPSVTLEGDIFQPSGLL 661
Score = 97 (39.2 bits), Expect = 9.3e-05, Sum P(2) = 9.3e-05
Identities = 45/225 (20%), Positives = 92/225 (40%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV 60
M+ GK D E + +Q E +KAL + ++A E++ + K + + Q
Sbjct: 256 MKAKLGKIDAETEKTQEEIQEFEKQIKALT-QAKEASMGGEVKT-LSEKVDSLAQ----- 308
Query: 61 NMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELK--TVEKKGKESNVIGSKFR 118
+ +K+ E L E+++K +E K +K K E K R
Sbjct: 309 ---EMTRESSKLNNKEDTLLGEKENVEKIVHSIEDLKKSVKERAAAVKKSEEGAADLKQR 365
Query: 119 WSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTR 178
+ S T EC+ K + S + +K LE L + + T ++L T+
Sbjct: 366 FQELST-TLEECE--KEHQGVLAGKSSGDEEKC--LEDQLRDAKIAVGTAGTELKQLKTK 420
Query: 179 VPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQT 223
+ E E+ E +++L E ++ +++ +V ++++++
Sbjct: 421 IEHCEKELKERKSQLMSKLEEAIEVENELGARKNDVEHVKKALES 465
Score = 84 (34.6 bits), Expect = 1.3e-08, Sum P(2) = 1.3e-08
Identities = 25/88 (28%), Positives = 45/88 (51%)
Query: 415 TLVAQDLNQAKRIGYSGG-GYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTS 473
T V + + AK + ++ VTLEG I +PSG ++GG +G R +
Sbjct: 625 TFVCKTTDVAKEVAFNRDIRTPSVTLEGDIFQPSGLLTGGSR---KGGGDRLRKLHDLAE 681
Query: 474 LVKDLEVKEKRLASLETELRILSQQKME 501
+L+ +KRLA +E++++ L +M+
Sbjct: 682 AESELQGHQKRLADVESQIKELQPLQMK 709
Score = 42 (19.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
KDL+ E L E + Q++ +E+ L ++ E D
Sbjct: 808 KDLKSHENEKEKLVMEEEAMKQEQSSLESHLTSLETQISTLTSEVD 853
Score = 39 (18.8 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 9/44 (20%), Positives = 23/44 (52%)
Query: 464 RKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLN 507
++ V + ++ ++ E L SLET++ L+ + E +++
Sbjct: 817 KEKLVMEEEAMKQEQSSLESHLTSLETQISTLTSEVDEQRAKVD 860
Score = 38 (18.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 12/55 (21%), Positives = 29/55 (52%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
LV + E ++ +SLE+ L L Q + ++++ ++ ++ +D L ++K
Sbjct: 820 LVMEEEAMKQEQSSLESHLTSLETQISTLTSEVDEQRAKVDALQKIHDESLAELK 874
>UNIPROTKB|G8JLG1 [details] [associations]
symbol:SMC1A "Structural maintenance of chromosomes protein
1A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
EMBL:Z97054 EMBL:AL161779 HGNC:HGNC:11111 ChiTaRS:SMC1A
ProteinModelPortal:G8JLG1 SMR:G8JLG1 Ensembl:ENST00000375340
Bgee:G8JLG1 Uniprot:G8JLG1
Length = 516
Score = 162 (62.1 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 67/277 (24%), Positives = 118/277 (42%)
Query: 136 ELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL--CEELTTRVPAMESEIAESRARL 193
ELE F Q + +L DLE +KV+T ++ L EE R+ +E I S+ L
Sbjct: 158 ELEKFNRDQKADQDRL-DLEER-KKVETEAKIKQKLREIEENQKRIEKLEEYITTSKQSL 215
Query: 194 ADLTREEAKLLDQVEKLAREVSEKRESM--------------QTSRSNNRLIDFVMQLKS 239
+ + E +L ++VE R + E + + Q S R + + +K
Sbjct: 216 EEQKKLEGELTEEVEMAKRRIDEINKELNQVMEQLGDARIDRQESSRQQRKAEIMESIKR 275
Query: 240 ENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGRVN 298
S +KY IAV+ G ++ I+ ++ + G I +K Q
Sbjct: 276 LYPGSVYGRLIDLCQPTQKKYQIAVTKVLGKNMDAIIVDSEKTGRDCIQYIKEQRGEPET 335
Query: 299 VIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
+PLD ++ + +K R + +ID+I+ + I+ A +A LV ++ A+R
Sbjct: 336 FLPLDYLEVKPTD--EKLRELKGAKLVIDVIRYEPPHIKKALQYACGNALVCDNVEDARR 393
Query: 359 IGYSGGG-YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
I + G ++ V L+G + + S + A DL R
Sbjct: 394 IAFGGHQRHKTVALDGTLFQKSGVISGGASDLKAKAR 430
>UNIPROTKB|F6V533 [details] [associations]
symbol:SMC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AAEX03007228
EMBL:AAEX03007229 EMBL:AAEX03007230 Ensembl:ENSCAFT00000001296
Uniprot:F6V533
Length = 1079
Score = 128 (50.1 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 81/383 (21%), Positives = 154/383 (40%)
Query: 16 LTR-VQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERY-VNMKNLGEHETKVQ 73
LTR +Q E +LK+LE L + + ++ K N + ++ V K++ + E +
Sbjct: 273 LTRQLQQTEKELKSLEALLNQ-----KRPQYIKAKENTSHHLKKLDVAKKSIKDSEKQCS 327
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVEK----KGKESNVIGSKF-RWSVFSAKTRF 128
+ E ++ A LE+ + D + +S K VE+ KG++ + S+ R+ + R
Sbjct: 328 KQEDDIKA-LET--ELVDLDGAWRSFEKQVEEEILHKGRDIELEASQLDRYKGLKEQVRK 384
Query: 129 ECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAE 188
+ I +LE Q + ++LA +VQ L + K E+ R+ +E
Sbjct: 385 KVAIMTQQLEKLHWEQKADKERLAFERRRHGEVQENLKQIKEQIEDHKKRIEKLEEYTKT 444
Query: 189 SRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN--NRLIDFVMQLKSENRV--- 243
L + ++E L+ ++E +SE E + RS N ID + + R
Sbjct: 445 CMDCLKEKKQQEETLVGEIENTKSRMSEVNEELNLIRSELQNAGIDSHEGTRQQKRAEVL 504
Query: 244 ---------SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVE-AGEAVIAAVKRQN 293
S +KY +AV+ G + T E + I +K +
Sbjct: 505 EHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGRYMVAIVVTSEKVAKDCIRFLKEER 564
Query: 294 VGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDL 353
+ LD + ++ R + +ID+I+ +++ F LV + +
Sbjct: 565 AEPETFLALDYLDI--KPINERLREIKGCKMVIDVIKTHFPQLKKVIQFVCGNGLVCETV 622
Query: 354 NQAKRIGYSGGGYRM-VTLEGAI 375
+A+ I + G R V L+G +
Sbjct: 623 EEARHIAFGGPERRKTVALDGTL 645
Score = 87 (35.7 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 30/110 (27%), Positives = 55/110 (50%)
Query: 416 LVAQDLNQAKRIGYSGGGYRM-VTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSL 474
LV + + +A+ I + G R V L+G + SG +SGG S+ + KA D
Sbjct: 617 LVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSD-----LKYKARC-WDEKE 670
Query: 475 VKDLEVKEKRLAS-LETELRILSQQK--MEVETQLNCTGNELKYKKQEYD 521
+K+L + +L L+ ++IL ++ +++T + T LKY + E +
Sbjct: 671 IKNLRDRRAQLIQELKDLMKILRKEADLKQIQTLVQGTHTRLKYSQSELE 720
>UNIPROTKB|E2QRT5 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9615 "Canis lupus familiaris" [GO:0005634
"nucleus" evidence=IEA] [GO:0030261 "chromosome condensation"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 SUPFAM:SSF75553 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK
EMBL:AAEX03007228 EMBL:AAEX03007229 EMBL:AAEX03007230
RefSeq:XP_538328.2 Ensembl:ENSCAFT00000001296
Ensembl:ENSCAFT00000049571 GeneID:481207 KEGG:cfa:481207
NextBio:20856062 Uniprot:E2QRT5
Length = 1235
Score = 128 (50.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 81/383 (21%), Positives = 154/383 (40%)
Query: 16 LTR-VQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERY-VNMKNLGEHETKVQ 73
LTR +Q E +LK+LE L + + ++ K N + ++ V K++ + E +
Sbjct: 273 LTRQLQQTEKELKSLEALLNQ-----KRPQYIKAKENTSHHLKKLDVAKKSIKDSEKQCS 327
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVEK----KGKESNVIGSKF-RWSVFSAKTRF 128
+ E ++ A LE+ + D + +S K VE+ KG++ + S+ R+ + R
Sbjct: 328 KQEDDIKA-LET--ELVDLDGAWRSFEKQVEEEILHKGRDIELEASQLDRYKGLKEQVRK 384
Query: 129 ECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAE 188
+ I +LE Q + ++LA +VQ L + K E+ R+ +E
Sbjct: 385 KVAIMTQQLEKLHWEQKADKERLAFERRRHGEVQENLKQIKEQIEDHKKRIEKLEEYTKT 444
Query: 189 SRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN--NRLIDFVMQLKSENRV--- 243
L + ++E L+ ++E +SE E + RS N ID + + R
Sbjct: 445 CMDCLKEKKQQEETLVGEIENTKSRMSEVNEELNLIRSELQNAGIDSHEGTRQQKRAEVL 504
Query: 244 ---------SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVE-AGEAVIAAVKRQN 293
S +KY +AV+ G + T E + I +K +
Sbjct: 505 EHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGRYMVAIVVTSEKVAKDCIRFLKEER 564
Query: 294 VGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDL 353
+ LD + ++ R + +ID+I+ +++ F LV + +
Sbjct: 565 AEPETFLALDYLDI--KPINERLREIKGCKMVIDVIKTHFPQLKKVIQFVCGNGLVCETV 622
Query: 354 NQAKRIGYSGGGYRM-VTLEGAI 375
+A+ I + G R V L+G +
Sbjct: 623 EEARHIAFGGPERRKTVALDGTL 645
Score = 87 (35.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 30/110 (27%), Positives = 55/110 (50%)
Query: 416 LVAQDLNQAKRIGYSGGGYRM-VTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSL 474
LV + + +A+ I + G R V L+G + SG +SGG S+ + KA D
Sbjct: 617 LVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSD-----LKYKARC-WDEKE 670
Query: 475 VKDLEVKEKRLAS-LETELRILSQQK--MEVETQLNCTGNELKYKKQEYD 521
+K+L + +L L+ ++IL ++ +++T + T LKY + E +
Sbjct: 671 IKNLRDRRAQLIQELKDLMKILRKEADLKQIQTLVQGTHTRLKYSQSELE 720
Score = 51 (23.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/46 (26%), Positives = 25/46 (54%)
Query: 477 DLE-VKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+LE +K+K+LA+ E L + + +E+Q +K ++Q +
Sbjct: 718 ELEMIKKKQLAAFYREQSQLQSELLNIESQCTMLSEGIKERQQRIE 763
Score = 44 (20.5 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 11/49 (22%), Positives = 25/49 (51%)
Query: 475 VKDLEVKE-KRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
+++ E K K+ ++ + +QK + QL + N+LK + + +T
Sbjct: 789 IREFEKKHVKQQQEIDQKRLEFEKQKTRLNVQLEYSRNQLKKRLSKINT 837
>UNIPROTKB|Q8NDV3 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes protein
1B" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030893 "meiotic cohesin complex" evidence=IDA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 Reactome:REACT_115566 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 Reactome:REACT_111183 GO:GO:0006310
GO:GO:0030261 GO:GO:0000800 GO:GO:0007062 eggNOG:COG1196
SUPFAM:SSF75553 EMBL:AL008718 EMBL:AL021391 GO:GO:0030893
HOVERGEN:HBG039593 KO:K06636 EMBL:AJ504806 EMBL:BC126208
EMBL:AK125736 IPI:IPI00479260 IPI:IPI00807400 IPI:IPI00893258
RefSeq:NP_683515.3 UniGene:Hs.334176 ProteinModelPortal:Q8NDV3
SMR:Q8NDV3 STRING:Q8NDV3 PhosphoSite:Q8NDV3 DMDM:57015410
PaxDb:Q8NDV3 PRIDE:Q8NDV3 Ensembl:ENST00000357450
Ensembl:ENST00000404354 GeneID:27127 KEGG:hsa:27127 UCSC:uc003bgc.3
UCSC:uc003bgd.3 CTD:27127 GeneCards:GC22M045739 H-InvDB:HIX0027884
HGNC:HGNC:11112 HPA:HPA001500 MIM:608685 neXtProt:NX_Q8NDV3
PharmGKB:PA35962 OMA:QLYHNEK GenomeRNAi:27127 NextBio:49836
Bgee:Q8NDV3 CleanEx:HS_SMC1B Genevestigator:Q8NDV3
GermOnline:ENSG00000077935 Uniprot:Q8NDV3
Length = 1235
Score = 132 (51.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 80/383 (20%), Positives = 158/383 (41%)
Query: 16 LTR-VQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERY-VNMKNLGEHETKVQ 73
LTR +Q E +LK++E L + + ++ K N + ++ V K++ + E +
Sbjct: 273 LTRQLQQTEKELKSVETLLNQ-----KRPQYIKAKENTSHHLKKLDVAKKSIKDSEKQCS 327
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVEK----KGKESNVIGSKF-RWSVFSAKTRF 128
+ E ++ A LE+ + D + +S K +E+ K ++ + S+ R+ + R
Sbjct: 328 KQEDDIKA-LET--ELADLDAAWRSFEKQIEEEILHKKRDIELEASQLDRYKELKEQVRK 384
Query: 129 ECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAE 188
+ +LE Q + ++LA + +VQ L + K E+ R+ +E
Sbjct: 385 KVATMTQQLEKLQWEQKTDEERLAFEKRRHGEVQGNLKQIKEQIEDHKKRIEKLEEYTKT 444
Query: 189 SRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN--NRLIDFVMQLKSENRV--- 243
L + ++E L+D++EK +SE E + RS N ID + + R
Sbjct: 445 CMDCLKEKKQQEETLVDEIEKTKSRMSEFNEELNLIRSELQNAGIDTHEGKRQQKRAEVL 504
Query: 244 ---------SXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQN 293
S +KY +AV+ G + IV + + + I +K +
Sbjct: 505 EHLKRLYPDSVFGRLFDLCHPIHKKYQLAVTKVFGRFITAIVVASEKVAKDCIRFLKEER 564
Query: 294 VGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDL 353
+ LD + ++ R + +ID+I+ Q +++ F LV + +
Sbjct: 565 AEPETFLALDYLDI--KPINERLRELKGCKMVIDVIKTQFPQLKKVIQFVCGNGLVCETM 622
Query: 354 NQAKRIGYSGGG-YRMVTLEGAI 375
+A+ I SG + V L+G +
Sbjct: 623 EEARHIALSGPERQKTVALDGTL 645
Score = 82 (33.9 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 26/109 (23%), Positives = 53/109 (48%)
Query: 416 LVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSL 474
LV + + +A+ I SG + V L+G + SG +SGG S+ + KA + L
Sbjct: 617 LVCETMEEARHIALSGPERQKTVALDGTLFLKSGVISGGSSD-----LKYKARCWDEKEL 671
Query: 475 VKDLEVKEKRLASLETELRILSQQK--MEVETQLNCTGNELKYKKQEYD 521
+ + +++ L+ ++ L ++ +++T + T LKY + E +
Sbjct: 672 KNLRDRRSQKIQELKGLMKTLRKETDLKQIQTLIQGTQTRLKYSQNELE 720
Score = 38 (18.4 bits), Expect = 0.00097, Sum P(2) = 0.00097
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 477 DLE-VKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
+LE +K+K L + E L + + +E+Q +K +++
Sbjct: 718 ELEMIKKKHLVAFYQEQSQLQSELLNIESQCIMLSEGIKERQR 760
>MGI|MGI:2154049 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IDA] [GO:0000795 "synaptonemal complex" evidence=IDA]
[GO:0000800 "lateral element" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007062
"sister chromatid cohesion" evidence=IDA] [GO:0007126 "meiosis"
evidence=IPI] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0030893 "meiotic cohesin complex" evidence=ISO;IDA] [GO:0034991
"nuclear meiotic cohesin complex" evidence=IDA] [GO:0051276
"chromosome organization" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:2154049 GO:GO:0005524
GO:GO:0007126 GO:GO:0005654 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 Reactome:REACT_118161 Reactome:REACT_120463
Reactome:REACT_75800 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 GO:GO:0034991
HOGENOM:HOG000195481 HOVERGEN:HBG039593 KO:K06636
GeneTree:ENSGT00580000081569 CTD:27127 OMA:QLYHNEK EMBL:AF303827
IPI:IPI00120490 RefSeq:NP_536718.1 UniGene:Mm.182737
ProteinModelPortal:Q920F6 SMR:Q920F6 STRING:Q920F6
PhosphoSite:Q920F6 PaxDb:Q920F6 PRIDE:Q920F6
Ensembl:ENSMUST00000023068 GeneID:140557 KEGG:mmu:140557
InParanoid:Q920F6 OrthoDB:EOG4RNB7M NextBio:369861 Bgee:Q920F6
CleanEx:MM_SMC1B Genevestigator:Q920F6
GermOnline:ENSMUSG00000022432 Uniprot:Q920F6
Length = 1248
Score = 128 (50.1 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 75/383 (19%), Positives = 159/383 (41%)
Query: 16 LTRVQLVET--DLKALEPELRKAVNFLELENCVQRKHNEIYQYERY-VNMKNLGEHETKV 72
LTR QL +T +LK++E L + + ++ K N + ++ ++ K + ++E +
Sbjct: 273 LTR-QLQQTAKELKSVEAILNQ-----KRPQYIKAKENTSHHLKKLDLSKKLITDNEKQC 326
Query: 73 QQME---QELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKF-RWSVFSAKTRF 128
+ E + L A L + + E E + +KG++ + S+ R+ + + R
Sbjct: 327 SKQEDGIRALVAELADLDRAWKSFEKQMEE--KILQKGRDIELENSQLDRYKLLKEQVRR 384
Query: 129 ECDIAKSELEIFLSTQSKETKKLA-------DLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ I +LE Q E ++LA D + NL++++ + E K E+L
Sbjct: 385 KVGIMTQQLEKLQWEQKAEKERLAFEKRRHGDTQGNLKQIKEQIEEHKKRIEKLEEYTKT 444
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNN-------RLIDFV 234
+ + + + L +E ++ ++ E+S R +Q + +N + + +
Sbjct: 445 CMDCLEDKKQQEEALKKEIENTKSRMSEVNEELSLIRNELQNAGIDNHEGKRQQKRAEVL 504
Query: 235 MQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQN 293
LK S +KY +AV+ G + IV + + + I +K +
Sbjct: 505 EHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGRYMVAIVVASEKIAKDCIRFLKAER 564
Query: 294 VGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDL 353
+ LD + ++ R + +ID+I+ Q +++ F LV + +
Sbjct: 565 AEPETFLALDYLDI--KPINERLREIKGCKMMIDVIKTQFPQLKKVIQFVCGNGLVCETV 622
Query: 354 NQAKRIGYSGGGYRM-VTLEGAI 375
+A+ I + G R V L+G +
Sbjct: 623 EEARHIAFGGPERRKAVALDGTL 645
Score = 85 (35.0 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 29/110 (26%), Positives = 54/110 (49%)
Query: 416 LVAQDLNQAKRIGYSGGGYRM-VTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSL 474
LV + + +A+ I + G R V L+G + SG +SGG S+ + KA + D
Sbjct: 617 LVCETVEEARHIAFGGPERRKAVALDGTLFLKSGVISGGSSD-----LKHKA-LCWDEKE 670
Query: 475 VKDLEVKEKRLAS-LETELRILSQQK--MEVETQLNCTGNELKYKKQEYD 521
+ +L K +L L+ ++ L ++ +++T + T LKY + E +
Sbjct: 671 LHNLRDKRSQLVQELKELMKTLRKETDLKQIQTLVQGTNTRLKYSQNELE 720
Score = 51 (23.0 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 14/58 (24%), Positives = 26/58 (44%)
Query: 475 VKDLEVKEKRLASLETELRI-LSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
+++ E K + + R+ +QK + QL + N+LK K DT ++ K
Sbjct: 789 IREFENKHVKQQQENDQKRLEFEKQKTRLNIQLEYSRNQLKKKLNNIDTLKTTIQKGK 846
>SGD|S000001886 [details] [associations]
symbol:SMC1 "Subunit of the multiprotein cohesin complex"
species:4932 "Saccharomyces cerevisiae" [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0034990 "nuclear mitotic cohesin complex"
evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0007064 "mitotic sister chromatid cohesion"
evidence=IGI] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0000217 "DNA secondary structure binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0003680 "AT DNA
binding" evidence=IDA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 SGD:S000001886
Pfam:PF02463 GO:GO:0005524 GO:GO:0051301 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0006302
GO:GO:0030261 GO:GO:0003680 GO:GO:0007064 eggNOG:COG1196
SUPFAM:SSF75553 PDB:1W1W PDBsum:1W1W GO:GO:0034990
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET
GeneTree:ENSGT00580000081569 OrthoDB:EOG42VCQD EMBL:L00602
PIR:A49464 RefSeq:NP_116647.1 ProteinModelPortal:P32908 SMR:P32908
DIP:DIP-2982N IntAct:P32908 MINT:MINT-434606 STRING:P32908
PaxDb:P32908 PeptideAtlas:P32908 EnsemblFungi:YFL008W GeneID:850540
KEGG:sce:YFL008W CYGD:YFL008w EvolutionaryTrace:P32908
NextBio:966301 Genevestigator:P32908 GermOnline:YFL008W
GO:GO:0000217 Uniprot:P32908
Length = 1225
Score = 140 (54.3 bits), Expect = 8.6e-08, Sum P(3) = 8.6e-08
Identities = 75/368 (20%), Positives = 161/368 (43%)
Query: 24 TDLKALE-PELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQELTAN 82
+DL+ ++ P+ +E ++ ++ + + YV ET+++ + + A
Sbjct: 310 SDLRLIKVPQQAAGKRISHIEKRIESLQKDLQRQKTYVE-----RFETQLKVVTRSKEAF 364
Query: 83 LESIKKCT---DEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELEI 139
E IK+ D+ + +++LKT ++ G + + +I + ELE
Sbjct: 365 EEEIKQSARNYDKFKLNENDLKTYNCLHEKYLTEGGSILEEKIAVLNNDKREI-QEELER 423
Query: 140 FLSTQ--SKE--TKKLA----DLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRA 191
F SK T++L+ L+ L ++ +L E+ L E + ++S+I +
Sbjct: 424 FNKRADISKRRITEELSITGEKLDTQLNDLRVSLNEKNALHTERLHELKKLQSDIESANN 483
Query: 192 RLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVSXXXXXXX 251
+ DL + + L +++ L+ + +RE+M+ +L + + LK
Sbjct: 484 QEYDLNFKLRETLVKIDDLS---ANQRETMK----ERKLRENIAMLK-RFFPGVKGLVHD 535
Query: 252 XXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYHS 310
+KY +AVST G + ++ E + + IA +K+Q G + IPLD ++
Sbjct: 536 LCHPKKEKYGLAVSTILGKNFDSVIVENLTVAQECIAFLKKQRAGTASFIPLDTIETE-- 593
Query: 311 QCYDKYRTPENVPRLIDLIQVQDE-KIRLAFYFATRETLVAQDLNQAKRIGYSGG-GYRM 368
P++ ++ + + E + A + ++++ LN AK + + G ++
Sbjct: 594 --LPTLSLPDSQDYILSINAIDYEPEYEKAMQYVCGDSIICNTLNIAKDLKWKKGIRGKL 651
Query: 369 VTLEGAII 376
VT+EGA+I
Sbjct: 652 VTIEGALI 659
Score = 72 (30.4 bits), Expect = 8.6e-08, Sum P(3) = 8.6e-08
Identities = 16/42 (38%), Positives = 28/42 (66%)
Query: 414 ETLVAQDLNQAKRIGYSGG--GYRMVTLEGAIIEPSGTMSGG 453
++++ LN AK + + G G ++VT+EGA+I +G M+GG
Sbjct: 628 DSIICNTLNIAKDLKWKKGIRG-KLVTIEGALIHKAGLMTGG 668
Score = 41 (19.5 bits), Expect = 8.6e-08, Sum P(3) = 8.6e-08
Identities = 12/47 (25%), Positives = 24/47 (51%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
KDLE + + SLE + + + +E++L N L ++++ T
Sbjct: 851 KDLENAQVEMKSLEEQEYAIEMKIGSIESKLEEHKNHLDELQKKFVT 897
>RGD|1308791 [details] [associations]
symbol:Smc1b "structural maintenance of chromosomes 1B"
species:10116 "Rattus norvegicus" [GO:0000775 "chromosome,
centromeric region" evidence=IEA;ISO] [GO:0000795 "synaptonemal
complex" evidence=ISO] [GO:0000800 "lateral element"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA;ISO]
[GO:0007126 "meiosis" evidence=IEA;ISO] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0030893 "meiotic cohesin complex"
evidence=ISO] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA;ISO] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 RGD:1308791 GO:GO:0005524 GO:GO:0007126 GO:GO:0000775
GO:GO:0003677 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0000800 EMBL:CH473950 GO:GO:0007062 SUPFAM:SSF75553
GO:GO:0030893 KO:K06636 GeneTree:ENSGT00580000081569 CTD:27127
OMA:QLYHNEK OrthoDB:EOG4RNB7M IPI:IPI00372956 RefSeq:NP_001123970.1
UniGene:Rn.56972 Ensembl:ENSRNOT00000044883 GeneID:300121
KEGG:rno:300121 NextBio:646377 Uniprot:D3ZE73
Length = 1247
Score = 125 (49.1 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 74/383 (19%), Positives = 158/383 (41%)
Query: 16 LTRVQLVET--DLKALEPELRKAVNFLELENCVQRKHNEIYQYERY-VNMKNLGEHETKV 72
LTR QL +T +LK++E L + + ++ K N + ++ ++ K + ++E +
Sbjct: 273 LTR-QLQQTAKELKSVEAVLNQ-----KRPQYIKAKENTSHHLKKLDLSKKLITDNEKQC 326
Query: 73 QQME---QELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKF-RWSVFSAKTRF 128
+ E + L A L + + E E + KG++ + S+ R+ + R
Sbjct: 327 AKQEDGIRALVAELVDLDRAWRSFEKQMEE--KILHKGRDIELENSQLDRYKELKEQVRR 384
Query: 129 ECDIAKSELEIFLSTQSKETKKLA-------DLEANLEKVQTTLTERKTLCEELT----T 177
I +LE Q E ++LA D + NL++++ + E K E+L T
Sbjct: 385 RVGIMTQQLEKLQWEQKAEKERLAFERRRHGDTQGNLKQIKEQIEEHKKRIEKLEEYTKT 444
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLA---REVSEKRESMQTSRSNNRLIDFV 234
+ +E + + A + ++ ++++ + E+L+ E+ + + + +
Sbjct: 445 CMDCLEDKKQQEEALIKEIDNTKSRMSEVNEELSLIRNELQNAGIDNHEGKRQRKRAEVL 504
Query: 235 MQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQN 293
LK S +KY +AV+ G + IV + + + I +K +
Sbjct: 505 EHLKRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGRYMVAIVVASEKVAKDCIRFLKEER 564
Query: 294 VGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDL 353
+ LD + ++ R + +ID+I+ Q +++ F LV + +
Sbjct: 565 AEPETFLALDYLDI--KPINERLREIKGCKMMIDVIKTQFPQLKKVIQFVCGNGLVCETV 622
Query: 354 NQAKRIGYSGGGYRM-VTLEGAI 375
+A+ I + G R V L+G +
Sbjct: 623 EEARHIAFGGPERRKAVALDGTL 645
Score = 84 (34.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 31/111 (27%), Positives = 56/111 (50%)
Query: 416 LVAQDLNQAKRIGYSGGGYRM-VTLEGAIIEPSGTMSGGGSN-PIRGLMGRKATVST--D 471
LV + + +A+ I + G R V L+G + SG +SGG S+ + L + + + D
Sbjct: 617 LVCETVEEARHIAFGGPERRKAVALDGTLFLKSGVISGGSSDLKHKALCWDEKELHSLRD 676
Query: 472 --TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEY 520
LV++L+ K L ET+L+ + T+L + NEL+ K+++
Sbjct: 677 KRNQLVQELKELMKTLRK-ETDLKQIQALVQGTNTRLKYSQNELEMIKKKH 726
Score = 50 (22.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 13/49 (26%), Positives = 24/49 (48%)
Query: 475 VKDLEVKEKRLASLETELRI-LSQQKMEVETQLNCTGNELKYKKQEYDT 522
+++ E K + + R+ +QK + QL + N+LK K + DT
Sbjct: 789 IREFENKHVKQQQENDQKRLEFEKQKTRLNIQLEYSRNQLKKKLNKIDT 837
>UNIPROTKB|F1SJW1 [details] [associations]
symbol:F1SJW1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
GO:GO:0005524 GO:GO:0005694 GO:GO:0051276 SUPFAM:SSF75553
GeneTree:ENSGT00580000081569 EMBL:CU694738
Ensembl:ENSSSCT00000000018 OMA:KHESERD Uniprot:F1SJW1
Length = 773
Score = 125 (49.1 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 73/377 (19%), Positives = 150/377 (39%)
Query: 18 RVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERY-VNMKNLGEHETKVQQME 76
++Q E +LK+LE L + + ++ K N + ++ V K++ + E + + E
Sbjct: 240 QLQQTEKELKSLEALLNQ-----KRPQYIKAKENTSHHLKKLDVAKKSIKDSEKQCSKQE 294
Query: 77 QELTANLESIKKCTDEMESAKSELKT-VEKKGKESNVIGSKF-RWSVFSAKTRFECDIAK 134
++ A + S + +++ + KG++ + S+ R+ + R + I
Sbjct: 295 DDIKALETELVDLDGAWRSFEKQIEEEILHKGRDIELEASQLDRYKELKEQVRKKVAIMT 354
Query: 135 SELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLA 194
+LE Q + ++LA + + Q L + K E+ R +E L
Sbjct: 355 QQLEKLQWEQKADEERLAFEKRRHGEAQENLKQVKEQIED-KKRFEKLEEYTKACMTCLE 413
Query: 195 DLTREEAKLLDQVEKLAREVSEKRESMQTSRSN--NRLIDFVMQLKSENRV--------- 243
+ ++E L+D++ K +SE E + RS N ID + + R
Sbjct: 414 EKKQQEKTLVDEIAKTKSRMSEVNEELNLIRSELQNAGIDNHEGRRQQKRAEVLEHLQRL 473
Query: 244 ---SXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGRVNV 299
S +KY +AV+ G + IV + + + I +K +
Sbjct: 474 YPDSVFGRLLDLCHPIHKKYQLAVTKLFGRYMVAIVVASEKVAKDCIRFLKEERAEPETF 533
Query: 300 IPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRI 359
+ LD + ++ R + +ID+++ Q ++R F LV + + +A+ I
Sbjct: 534 LALDYLDI--KPINERLREIKGCKMVIDVVKTQFPQLRKVIQFVCGNGLVCETVEEARHI 591
Query: 360 GYSGGGYRM-VTLEGAI 375
+ G R V L+G +
Sbjct: 592 AFGGPERRKTVALDGTL 608
Score = 79 (32.9 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 29/110 (26%), Positives = 53/110 (48%)
Query: 416 LVAQDLNQAKRIGYSGGGYRM-VTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSL 474
LV + + +A+ I + G R V L+G + SG +SGG S+ + KA + L
Sbjct: 580 LVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSD-----LKYKARCWDEKEL 634
Query: 475 VKDLEVKEKRLAS-LETELRILSQQK--MEVETQLNCTGNELKYKKQEYD 521
K+L K +L L+ ++ L ++ +++ + T LKY + E +
Sbjct: 635 -KNLRDKRTQLIQELKDLMKALRKEADLKQIQALIQGTHTRLKYSQSELE 683
Score = 43 (20.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 10/46 (21%), Positives = 24/46 (52%)
Query: 477 DLEV-KEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+LE+ ++K LA+ E L + + +E+Q ++ ++Q +
Sbjct: 681 ELEIIQKKHLAAFYREQSQLQSELLNIESQCTMLSEGIRKRQQRIE 726
>SGD|S000001927 [details] [associations]
symbol:SMC2 "Subunit of the condensin complex" species:4932
"Saccharomyces cerevisiae" [GO:0006281 "DNA repair" evidence=IEA]
[GO:0003680 "AT DNA binding" evidence=IDA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000796 "condensin complex"
evidence=IEA] [GO:0000799 "nuclear condensin complex"
evidence=ISS;TAS;IPI] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005694 "chromosome" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0070058 "tRNA gene clustering" evidence=IMP]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA;IMP;TAS]
[GO:0051301 "cell division" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0000217 "DNA secondary
structure binding" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=TAS] [GO:0051276 "chromosome
organization" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 SGD:S000001927 Pfam:PF02463 GO:GO:0005739
GO:GO:0005524 GO:GO:0051301 GO:GO:0006281 EMBL:D50617 EMBL:BK006940
GO:GO:0016887 GO:GO:0006310 GO:GO:0003690 GO:GO:0007076
GO:GO:0003680 GO:GO:0000799 GO:GO:0070058 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 EMBL:U05820
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
GO:GO:0000217 HOGENOM:HOG000163792 OrthoDB:EOG4P2T9B PIR:A56157
RefSeq:NP_116687.1 ProteinModelPortal:P38989 SMR:P38989
DIP:DIP-2983N IntAct:P38989 MINT:MINT-435495 STRING:P38989
PaxDb:P38989 EnsemblFungi:YFR031C GeneID:850589 KEGG:sce:YFR031C
CYGD:YFR031c OMA:SECESAE NextBio:966434 Genevestigator:P38989
GermOnline:YFR031C Uniprot:P38989
Length = 1170
Score = 154 (59.3 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 111/519 (21%), Positives = 209/519 (40%)
Query: 30 EPELRKAVNFLELENCVQRKHNEIYQYERYVNMK--NLGEHETKVQQMEQELTANLESIK 87
E EL K +LEN NEI + + +++K NL + K + +E E+ ++ +
Sbjct: 289 EKELHKEGTISKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALESEIASSSAKLI 348
Query: 88 KCTDEMESAKSELKTVEKK-GKESNVIGSKFRW---------SVFSAKTRFECDIAKS-- 135
+ + + + K V+++ K+ ++ K S +A + +AK+
Sbjct: 349 EKKSAYANTEKDYKMVQEQLSKQRDLYKRKEELVSTLTTGISSTGAADGGYNAQLAKAKT 408
Query: 136 EL-EIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTR-VPAMESEIAESRARL 193
EL E+ L+ + K + K+ L+ L ++ L E T EL + V + + RARL
Sbjct: 409 ELNEVSLAIK-KSSMKMELLKKELLTIEPKLKEA-TKDNELNVKHVKQCQETCDKLRARL 466
Query: 194 ADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLK----------SENRV 243
+ + +++ D + RE K QT +++ L V L+ + V
Sbjct: 467 VEYGFDPSRIKDLKQ---REDKLKSHYYQTCKNSEYLKRRVTNLEFNYTKPYPNFEASFV 523
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGA--LNYIVTETVEAGEAVIAAVKRQNVGRVNVIP 301
+Y A+ T G N +V ++ A + + R+ RV +IP
Sbjct: 524 HGVVGQLFQIDNDNIRYATALQTCAGGRLFNVVVQDSQTATQLLERGRLRK---RVTIIP 580
Query: 302 LDKM--QQYHSQCYD--KYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
LDK+ + SQ D K P V I+LI+ DE I A F +L+ +D AK
Sbjct: 581 LDKIYTRPISSQVLDLAKKIAPGKVELAINLIRF-DESITKAMEFIFGNSLICEDPETAK 639
Query: 358 RIGYSGG-GYRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETL 416
+I + R +TL+G + +P TL N ++ + Y + + I+
Sbjct: 640 KITFHPKIRARSITLQGDVYDPEGTLSGGSRNTSESLLVDIQKYNQIQKQIETIQADLNH 699
Query: 417 VAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVK 476
V ++L + L ++ + +NP ++ R + D +
Sbjct: 700 VTEELQTQYATSQKTKTIQS-DLNLSLHKLDLAKRNLDANPSSQIIARNEEILRDIGECE 758
Query: 477 -DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
+++ K+ L + E+ + + E ++ NELK
Sbjct: 759 NEIKTKQMSLKKCQEEVSTIEKDMKEYDSDKGSKLNELK 797
Score = 111 (44.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 50/210 (23%), Positives = 93/210 (44%)
Query: 328 LIQVQDEKIRLAFYFATRE-----TLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETL 382
L Q+ ++ IR A T +V QD A ++ G + VT+ + +
Sbjct: 530 LFQIDNDNIRYATALQTCAGGRLFNVVVQDSQTATQLLERGRLRKRVTIIPLDKIYTRPI 589
Query: 383 VAQDLNQAKRI--GYSGGGYRMVTLEGAIIEPSE-----TLVAQDLNQAKRIGYSGG-GY 434
+Q L+ AK+I G ++ + +I + E +L+ +D AK+I +
Sbjct: 590 SSQVLDLAKKIAPGKVELAINLIRFDESITKAMEFIFGNSLICEDPETAKKITFHPKIRA 649
Query: 435 RMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEVKEKRLASLETELRI 494
R +TL+G + +P GT+SGG N L+ + + K +E + L + EL+
Sbjct: 650 RSITLQGDVYDPEGTLSGGSRNTSESLL---VDIQKYNQIQKQIETIQADLNHVTEELQT 706
Query: 495 ---LSQQKMEVETQLNCTGNELKYKKQEYD 521
SQ+ +++ LN + ++L K+ D
Sbjct: 707 QYATSQKTKTIQSDLNLSLHKLDLAKRNLD 736
Score = 75 (31.5 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 49/215 (22%), Positives = 92/215 (42%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMK-NL 65
K E+R EK R + + + K E + + E+E +++ NE + + + + +L
Sbjct: 172 KMFEDRREKAERT-MSKKETKLQE---NRTLLTEEIEPKLEKLRNEKRMFLEFQSTQTDL 227
Query: 66 GEHETKVQQMEQ-ELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
+ E V E + SI++ + E+ L KK E I S V
Sbjct: 228 EKTERIVVSYEYYNIKHKHTSIRETLENGETRMKMLNEFVKKTSEE--IDS-LNEDVEEI 284
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
K + E ++ K T SK K L + +++T+L+ + + T + A+ES
Sbjct: 285 KLQKEKELHKE------GTISKLENKENGLLNEISRLKTSLSIKVENLNDTTEKSKALES 338
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
EIA S A+L + A + + ++S++R+
Sbjct: 339 EIASSSAKLIEKKSAYANTEKDYKMVQEQLSKQRD 373
Score = 51 (23.0 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 12/46 (26%), Positives = 30/46 (65%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
+++ +E EK+ A+L+T ++ + + KM+++ ++ NE YK++
Sbjct: 985 NIMNMIENVEKKEAALKTMIKTIEKDKMKIQETISKL-NE--YKRE 1027
Score = 49 (22.3 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 15/47 (31%), Positives = 26/47 (55%)
Query: 477 DLEVK----EKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
DLE K E L +++TEL ++ M+++ +LN +K K+ E
Sbjct: 858 DLEGKIRGVEDDLVTVQTELNEEKKRLMDIDDELNELETLIKKKQDE 904
Score = 42 (19.8 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 12/39 (30%), Positives = 24/39 (61%)
Query: 468 VSTDTSLVKDLEV-KEKRLASLETELRILSQQKMEVETQ 505
VST +K+ + K +L L+ EL++L+++ E E++
Sbjct: 775 VSTIEKDMKEYDSDKGSKLNELKKELKLLAKELEEQESE 813
Score = 39 (18.8 bits), Expect = 3.1e-06, Sum P(2) = 3.1e-06
Identities = 9/33 (27%), Positives = 19/33 (57%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLN 507
+K +E + + LE ++R + + V+T+LN
Sbjct: 846 LKSIESLKLENSDLEGKIRGVEDDLVTVQTELN 878
>UNIPROTKB|I3LK17 [details] [associations]
symbol:CCDC88A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008017 "microtubule binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] InterPro:IPR008636 Pfam:PF05622
GO:GO:0005737 GO:GO:0000226 GeneTree:ENSGT00690000101702
EMBL:CU466241 EMBL:CU915675 Ensembl:ENSSSCT00000032254
Uniprot:I3LK17
Length = 1741
Score = 141 (54.7 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 60/241 (24%), Positives = 112/241 (46%)
Query: 10 EERTEKLTRVQLVETDL-KALEPELRKAVNFLELENCVQR--KHNEIYQYERYVNMKNLG 66
+E + KL++++ + + K LE K ELEN + K NE+ Q ++ N+K
Sbjct: 542 KETSSKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQ-KKITNLKITC 600
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
E ++Q EL KK D ++ +L+++EK+ + + + R +V S K
Sbjct: 601 EKVEALEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKC 660
Query: 127 RFECDIAKSELEIF-LSTQSKETKKLADL-EANLEKVQTTLTERKTLCEELTTRVPAMES 184
+A+ +LE L ++ ++ KK +L +A+ +K + + L E A+E+
Sbjct: 661 A-SMKMAQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALEN 719
Query: 185 ---EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+I + + L DL E L +E+L ++S KR Q + N L QL+ +
Sbjct: 720 SNKKIQQLESELQDLEMENQTLQKNLEEL--KISSKRLE-QLEKENKSLEQETSQLEKDK 776
Query: 242 R 242
+
Sbjct: 777 K 777
Score = 108 (43.1 bits), Expect = 0.00079, Sum P(2) = 0.00079
Identities = 53/237 (22%), Positives = 102/237 (43%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLG 66
K +E +K+T +++ ++ALE E + LE EN +K + ++ + +++L
Sbjct: 584 KENELLQKKITNLKITCEKVEALEQENSE----LERENRKFKKTLDSFKNLTF-QLESLE 638
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
+ +++ + EL N+ES+K + +M + E K +E + KE G + + F
Sbjct: 639 KENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESE-KEQLKKGLELMKASFKKTE 697
Query: 127 RFEC-----DIAKSELEIFLSTQSKETKKLA----DLEANLEKVQTTLTERKTLC---EE 174
R E D L+ L +K+ ++L DLE + +Q L E K E+
Sbjct: 698 RLEVSYQGLDTENQRLQKALENSNKKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQ 757
Query: 175 LTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLI 231
L ++E E ++ L +E +L Q E + E + N+ +
Sbjct: 758 LEKENKSLEQETSQLEKDKKQLEKENKRLRQQAEIKDTTLEENNVKIGNLEKENKAL 814
Score = 67 (28.6 bits), Expect = 2.5e-07, Sum P(2) = 2.5e-07
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+++L K LE+KE+++A+LE L + ++ +L + KQ D
Sbjct: 906 ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQD 956
Score = 50 (22.7 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 475 VKD--LEVKEKRLASLETELRILSQQKMEVETQLN 507
VKD +EV E+ A+L+ E + L Q ++ETQ N
Sbjct: 988 VKDRLIEV-ERNNATLQAEKQALKTQLKQLETQNN 1021
Score = 44 (20.5 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+LEV+ K L +L Q ++E L ++ K + ++T + K
Sbjct: 1133 KNLEVEHKDLEDRYNQLLKQKGQLEDLEKTLKVEQEKMLLKSKNHETVAAEYK 1185
Score = 40 (19.1 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 478 LEVKEKRLASLETELRILSQQKMEVETQL 506
L+VK+ RL +E L +K ++TQL
Sbjct: 986 LKVKD-RLIEVERNNATLQAEKQALKTQL 1013
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLN--CTG-NELKYKKQEYDTCLID 526
SL+ + ++++ RL + ++L+ QQ T+LN C ++LK +E + L+D
Sbjct: 1217 SLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLEEENRHLLD 1273
>UNIPROTKB|F1SQK4 [details] [associations]
symbol:CCDC88A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043422 "protein kinase B binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IEA] [GO:0032148 "activation of protein kinase B activity"
evidence=IEA] [GO:0031929 "TOR signaling cascade" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016044 "cellular membrane organization" evidence=IEA]
[GO:0010975 "regulation of neuron projection development"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0006275 "regulation of DNA replication" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] InterPro:IPR008636 Pfam:PF05622
GO:GO:0005783 GO:GO:0005829 GO:GO:0005886 GO:GO:0005794
GO:GO:0000226 GO:GO:0016477 GO:GO:0006275 GO:GO:0031929
GO:GO:0031410 GO:GO:0030027 GO:GO:0042127 GO:GO:0032148
GO:GO:0035091 GO:GO:0032956 GO:GO:0030032 GO:GO:0010975
GO:GO:0016044 GeneTree:ENSGT00690000101702 OMA:TGFRSKQ
EMBL:CU466241 EMBL:CU915675 Ensembl:ENSSSCT00000009203
Uniprot:F1SQK4
Length = 1819
Score = 141 (54.7 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 60/241 (24%), Positives = 112/241 (46%)
Query: 10 EERTEKLTRVQLVETDL-KALEPELRKAVNFLELENCVQR--KHNEIYQYERYVNMKNLG 66
+E + KL++++ + + K LE K ELEN + K NE+ Q ++ N+K
Sbjct: 542 KETSSKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQ-KKITNLKITC 600
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
E ++Q EL KK D ++ +L+++EK+ + + + R +V S K
Sbjct: 601 EKVEALEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKC 660
Query: 127 RFECDIAKSELEIF-LSTQSKETKKLADL-EANLEKVQTTLTERKTLCEELTTRVPAMES 184
+A+ +LE L ++ ++ KK +L +A+ +K + + L E A+E+
Sbjct: 661 A-SMKMAQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALEN 719
Query: 185 ---EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+I + + L DL E L +E+L ++S KR Q + N L QL+ +
Sbjct: 720 SNKKIQQLESELQDLEMENQTLQKNLEEL--KISSKRLE-QLEKENKSLEQETSQLEKDK 776
Query: 242 R 242
+
Sbjct: 777 K 777
Score = 108 (43.1 bits), Expect = 0.00087, Sum P(2) = 0.00086
Identities = 53/237 (22%), Positives = 102/237 (43%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLG 66
K +E +K+T +++ ++ALE E + LE EN +K + ++ + +++L
Sbjct: 584 KENELLQKKITNLKITCEKVEALEQENSE----LERENRKFKKTLDSFKNLTF-QLESLE 638
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
+ +++ + EL N+ES+K + +M + E K +E + KE G + + F
Sbjct: 639 KENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESE-KEQLKKGLELMKASFKKTE 697
Query: 127 RFEC-----DIAKSELEIFLSTQSKETKKLA----DLEANLEKVQTTLTERKTLC---EE 174
R E D L+ L +K+ ++L DLE + +Q L E K E+
Sbjct: 698 RLEVSYQGLDTENQRLQKALENSNKKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQ 757
Query: 175 LTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLI 231
L ++E E ++ L +E +L Q E + E + N+ +
Sbjct: 758 LEKENKSLEQETSQLEKDKKQLEKENKRLRQQAEIKDTTLEENNVKIGNLEKENKAL 814
Score = 67 (28.6 bits), Expect = 2.7e-07, Sum P(2) = 2.7e-07
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+++L K LE+KE+++A+LE L + ++ +L + KQ D
Sbjct: 909 ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQD 959
Score = 50 (22.7 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 475 VKD--LEVKEKRLASLETELRILSQQKMEVETQLN 507
VKD +EV E+ A+L+ E + L Q ++ETQ N
Sbjct: 991 VKDRLIEV-ERNNATLQAEKQALKTQLKQLETQNN 1024
Score = 44 (20.5 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+LEV+ K L +L Q ++E L ++ K + ++T + K
Sbjct: 1136 KNLEVEHKDLEDRYNQLLKQKGQLEDLEKTLKVEQEKMLLKSKNHETVAAEYK 1188
Score = 40 (19.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 478 LEVKEKRLASLETELRILSQQKMEVETQL 506
L+VK+ RL +E L +K ++TQL
Sbjct: 989 LKVKD-RLIEVERNNATLQAEKQALKTQL 1016
Score = 39 (18.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLN--CTG-NELKYKKQEYDTCLID 526
SL+ + ++++ RL + ++L+ QQ T+LN C ++LK +E + L+D
Sbjct: 1220 SLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLEEENRHLLD 1276
>UNIPROTKB|G3MXG3 [details] [associations]
symbol:CCDC88A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008017 "microtubule binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] InterPro:IPR008636 Pfam:PF05622
GO:GO:0005737 GO:GO:0000226 GeneTree:ENSGT00690000101702
EMBL:DAAA02030913 Ensembl:ENSBTAT00000064674 Uniprot:G3MXG3
Length = 1799
Score = 140 (54.3 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 61/241 (25%), Positives = 111/241 (46%)
Query: 10 EERTEKLTRVQLVETDL-KALEPELRKAVNFLELENCVQR--KHNEIYQYERYVNMKNLG 66
+E + KL++ + + + K LE K ELEN + K NE+ Q ++ N+K
Sbjct: 597 KETSSKLSKTEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQ-KKITNLKITC 655
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
E ++Q EL KK D ++ +L+++EK+ + + + R SV S K
Sbjct: 656 EKIEALEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRSVESLKC 715
Query: 127 RFECDIAKSELEIF-LSTQSKETKKLADL-EANLEKVQTTLTERKTLCEELTTRVPAMES 184
+A+ +LE L ++ ++ KK +L +A+ +K + + L E A+E+
Sbjct: 716 A-SMKMAQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALEN 774
Query: 185 ---EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+I + + L DL E L +E+L ++S KR Q + N L QL+ +
Sbjct: 775 SNKKIQQLESELQDLEMENQTLQKNLEEL--KISSKRLE-QLEKENKSLEQETSQLEKDK 831
Query: 242 R 242
+
Sbjct: 832 K 832
Score = 67 (28.6 bits), Expect = 3.4e-07, Sum P(2) = 3.4e-07
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+++L K LE+KE+++A+LE L + ++ +L + KQ D
Sbjct: 961 ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQD 1011
Score = 50 (22.7 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 475 VKD--LEVKEKRLASLETELRILSQQKMEVETQLN 507
VKD +EV E+ A+L+ E + L Q ++ETQ N
Sbjct: 1042 VKDRLIEV-ERNNATLQAEKQALKTQLKQLETQNN 1075
Score = 44 (20.5 bits), Expect = 7.7e-05, Sum P(2) = 7.7e-05
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+LEV+ K L +L Q ++E L ++ K + ++T + K
Sbjct: 1187 KNLEVEHKDLEDRYNQLLKQKGQLEDLEKTLKVEQEKMLLKNKNHETVAAEFK 1239
Score = 40 (19.1 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 478 LEVKEKRLASLETELRILSQQKMEVETQL 506
L+VK+ RL +E L +K ++TQL
Sbjct: 1040 LKVKD-RLIEVERNNATLQAEKQALKTQL 1067
Score = 39 (18.8 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLN--CTG-NELKYKKQEYDTCLID 526
SL+ + ++++ RL + ++L+ QQ T+LN C ++LK +E + L+D
Sbjct: 1271 SLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLEEENRHLLD 1327
>UNIPROTKB|F1MAY4 [details] [associations]
symbol:CCDC88A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043422 "protein kinase B binding" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042127 "regulation of cell proliferation" evidence=IEA]
[GO:0035091 "phosphatidylinositol binding" evidence=IEA]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IEA] [GO:0032148 "activation of protein kinase B activity"
evidence=IEA] [GO:0031929 "TOR signaling cascade" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030032
"lamellipodium assembly" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016044 "cellular membrane organization" evidence=IEA]
[GO:0010975 "regulation of neuron projection development"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IEA]
[GO:0006275 "regulation of DNA replication" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] InterPro:IPR008636 Pfam:PF05622
GO:GO:0005783 GO:GO:0005829 GO:GO:0005886 GO:GO:0005794
GO:GO:0000226 GO:GO:0016477 GO:GO:0006275 GO:GO:0031929
GO:GO:0031410 GO:GO:0030027 GO:GO:0042127 GO:GO:0032148
GO:GO:0035091 GO:GO:0032956 GO:GO:0030032 GO:GO:0010975
GO:GO:0016044 GeneTree:ENSGT00690000101702 OMA:TGFRSKQ
EMBL:DAAA02030913 IPI:IPI00700652 Ensembl:ENSBTAT00000033104
Uniprot:F1MAY4
Length = 1877
Score = 140 (54.3 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 61/241 (25%), Positives = 111/241 (46%)
Query: 10 EERTEKLTRVQLVETDL-KALEPELRKAVNFLELENCVQR--KHNEIYQYERYVNMKNLG 66
+E + KL++ + + + K LE K ELEN + K NE+ Q ++ N+K
Sbjct: 597 KETSSKLSKTEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQ-KKITNLKITC 655
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
E ++Q EL KK D ++ +L+++EK+ + + + R SV S K
Sbjct: 656 EKIEALEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRSVESLKC 715
Query: 127 RFECDIAKSELEIF-LSTQSKETKKLADL-EANLEKVQTTLTERKTLCEELTTRVPAMES 184
+A+ +LE L ++ ++ KK +L +A+ +K + + L E A+E+
Sbjct: 716 A-SMKMAQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALEN 774
Query: 185 ---EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+I + + L DL E L +E+L ++S KR Q + N L QL+ +
Sbjct: 775 SNKKIQQLESELQDLEMENQTLQKNLEEL--KISSKRLE-QLEKENKSLEQETSQLEKDK 831
Query: 242 R 242
+
Sbjct: 832 K 832
Score = 67 (28.6 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+++L K LE+KE+++A+LE L + ++ +L + KQ D
Sbjct: 964 ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQD 1014
Score = 50 (22.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 475 VKD--LEVKEKRLASLETELRILSQQKMEVETQLN 507
VKD +EV E+ A+L+ E + L Q ++ETQ N
Sbjct: 1045 VKDRLIEV-ERNNATLQAEKQALKTQLKQLETQNN 1078
Score = 44 (20.5 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 13/53 (24%), Positives = 24/53 (45%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+LEV+ K L +L Q ++E L ++ K + ++T + K
Sbjct: 1190 KNLEVEHKDLEDRYNQLLKQKGQLEDLEKTLKVEQEKMLLKNKNHETVAAEFK 1242
Score = 40 (19.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 478 LEVKEKRLASLETELRILSQQKMEVETQL 506
L+VK+ RL +E L +K ++TQL
Sbjct: 1043 LKVKD-RLIEVERNNATLQAEKQALKTQL 1070
Score = 39 (18.8 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLN--CTG-NELKYKKQEYDTCLID 526
SL+ + ++++ RL + ++L+ QQ T+LN C ++LK +E + L+D
Sbjct: 1274 SLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLEEENRHLLD 1330
>UNIPROTKB|Q3V6T2 [details] [associations]
symbol:CCDC88A "Girdin" species:9606 "Homo sapiens"
[GO:0000226 "microtubule cytoskeleton organization" evidence=IEA]
[GO:0006260 "DNA replication" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IEA] [GO:0031410
"cytoplasmic vesicle" evidence=IDA] [GO:0016477 "cell migration"
evidence=IMP] [GO:0035091 "phosphatidylinositol binding"
evidence=IDA] [GO:0042127 "regulation of cell proliferation"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0016020 "membrane" evidence=IDA]
[GO:0016044 "cellular membrane organization" evidence=IDA]
[GO:0043422 "protein kinase B binding" evidence=IPI] [GO:0042803
"protein homodimerization activity" evidence=IPI] [GO:0003779
"actin binding" evidence=IDA] [GO:0030027 "lamellipodium"
evidence=IDA] [GO:0030032 "lamellipodium assembly" evidence=IMP]
[GO:0032956 "regulation of actin cytoskeleton organization"
evidence=IMP] [GO:0001932 "regulation of protein phosphorylation"
evidence=ISS] [GO:0006275 "regulation of DNA replication"
evidence=ISS] [GO:0008017 "microtubule binding" evidence=ISS]
[GO:0032148 "activation of protein kinase B activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=IDA] [GO:0031929 "TOR signaling
cascade" evidence=ISS] [GO:0010975 "regulation of neuron projection
development" evidence=ISS] InterPro:IPR008636 Pfam:PF05622
GO:GO:0005783 GO:GO:0005829 GO:GO:0005886 GO:GO:0005794
GO:GO:0005737 GO:GO:0003779 GO:GO:0000226 GO:GO:0016477
GO:GO:0006275 GO:GO:0031929 GO:GO:0006260 GO:GO:0031410
GO:GO:0030027 GO:GO:0016023 GO:GO:0042127 GO:GO:0032148
eggNOG:NOG12793 GO:GO:0035091 GO:GO:0032956 GO:GO:0030032
GO:GO:0008017 GO:GO:0010975 GO:GO:0016044 HOVERGEN:HBG057867
EMBL:AB201172 EMBL:AB125644 EMBL:AC019198 EMBL:AC092176
EMBL:AC012358 EMBL:BC132736 EMBL:BC144320 EMBL:BX537985
EMBL:BX538154 EMBL:BX648138 IPI:IPI00171134 IPI:IPI00654603
IPI:IPI00892916 IPI:IPI00893288 IPI:IPI00943263
RefSeq:NP_001129069.1 RefSeq:NP_001241872.1 RefSeq:NP_060554.3
UniGene:Hs.292925 ProteinModelPortal:Q3V6T2 SMR:Q3V6T2
IntAct:Q3V6T2 STRING:Q3V6T2 PhosphoSite:Q3V6T2 DMDM:147644956
PaxDb:Q3V6T2 PRIDE:Q3V6T2 Ensembl:ENST00000263630
Ensembl:ENST00000336838 Ensembl:ENST00000413716
Ensembl:ENST00000436346 GeneID:55704 KEGG:hsa:55704 UCSC:uc002ryu.2
UCSC:uc002ryv.2 UCSC:uc002ryw.3 UCSC:uc010yoz.1 CTD:55704
GeneCards:GC02M055514 HGNC:HGNC:25523 HPA:HPA038101 MIM:609736
neXtProt:NX_Q3V6T2 PharmGKB:PA162381751 InParanoid:Q3V6T2
OMA:TGFRSKQ ChiTaRS:CCDC88A GenomeRNAi:55704 NextBio:60553
ArrayExpress:Q3V6T2 Bgee:Q3V6T2 CleanEx:HS_CCDC88A
Genevestigator:Q3V6T2 Uniprot:Q3V6T2
Length = 1871
Score = 138 (53.6 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 60/241 (24%), Positives = 112/241 (46%)
Query: 10 EERTEKLTRVQLVETDLKA-LEPELRKAVNFLELENCVQR--KHNEIYQYERYVNMKNLG 66
+E + KL++++ + +K LE K ELEN + K NE+ Q ++ N+K
Sbjct: 597 KETSSKLSKIEFEKRQIKKELEHYKEKGERAEELENELHHLEKENELLQ-KKITNLKITC 655
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
E ++Q EL +KK D ++ +L+++EK+ + + + R +V S K
Sbjct: 656 EKIEALEQENSELERENRKLKKTLDSFKNLTFQLESLEKENSQLDEENLELRRNVESLKC 715
Query: 127 RFECDIAKSELEIF-LSTQSKETKK-LADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+A+ +LE L ++ ++ KK L L+A+ +K + + L E +E+
Sbjct: 716 A-SMKMAQLQLENKELESEKEQLKKGLELLKASFKKTERLEVSYQGLDIENQRLQKTLEN 774
Query: 185 ---EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+I + + L DL E L +E+L ++S KR Q + N L QL+ +
Sbjct: 775 SNKKIQQLESELQDLEMENQTLQKNLEEL--KISSKRLE-QLEKENKSLEQETSQLEKDK 831
Query: 242 R 242
+
Sbjct: 832 K 832
Score = 115 (45.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 56/249 (22%), Positives = 108/249 (43%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLG 66
K +E +K+T +++ ++ALE E + LE EN +K + ++ + +++L
Sbjct: 639 KENELLQKKITNLKITCEKIEALEQENSE----LERENRKLKKTLDSFKNLTF-QLESLE 693
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
+ +++ + EL N+ES+K + +M + E K +E + KE G + + F
Sbjct: 694 KENSQLDEENLELRRNVESLKCASMKMAQLQLENKELESE-KEQLKKGLELLKASFKKTE 752
Query: 127 RFEC-----DIAKSELEIFLSTQSKETKKLA----DLEANLEKVQTTLTERKTLC---EE 174
R E DI L+ L +K+ ++L DLE + +Q L E K E+
Sbjct: 753 RLEVSYQGLDIENQRLQKTLENSNKKIQQLESELQDLEMENQTLQKNLEELKISSKRLEQ 812
Query: 175 LTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFV 234
L ++E E ++ L +E +L Q E + E + N+ +
Sbjct: 813 LEKENKSLEQETSQLEKDKKQLEKENKRLRQQAEIKDTTLEENNVKIGNLEKENKTLSKE 872
Query: 235 MQLKSENRV 243
+ + E+ V
Sbjct: 873 IGIYKESCV 881
Score = 67 (28.6 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+++L K LE+KE+++A+LE L + ++ +L + KQ D
Sbjct: 962 ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQD 1012
Score = 51 (23.0 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 21/59 (35%), Positives = 31/59 (52%)
Query: 455 SNPIRGLMGRKATVSTDTSL----VKD--LEVKEKRLASLETELRILSQQKMEVETQLN 507
S PI G + S +T+ VKD +EV E+ A+L+ E + L Q ++ETQ N
Sbjct: 1020 SPPISGEDNKWERESQETTRELLKVKDRLIEV-ERNNATLQAEKQALKTQLKQLETQNN 1077
Score = 39 (18.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLN--CTG-NELKYKKQEYDTCLID 526
SL+ + ++++ RL + ++L+ QQ T+LN C ++LK +E + L+D
Sbjct: 1273 SLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLEEENRHLLD 1329
Score = 38 (18.4 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 11/53 (20%), Positives = 24/53 (45%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+LEV+ + L +L Q ++E L ++ + + ++T + K
Sbjct: 1189 KNLEVEHRDLEDRYNQLLKQKGQLEDLEKMLKVEQEKMLLENKNHETVAAEYK 1241
>UNIPROTKB|E2R498 [details] [associations]
symbol:CCDC88A "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000226
"microtubule cytoskeleton organization" evidence=IEA]
InterPro:IPR008636 Pfam:PF05622 GO:GO:0005737 GO:GO:0000226
GeneTree:ENSGT00690000101702 OMA:TGFRSKQ EMBL:AAEX03007533
Ensembl:ENSCAFT00000004477 Uniprot:E2R498
Length = 1874
Score = 138 (53.6 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 60/241 (24%), Positives = 113/241 (46%)
Query: 10 EERTEKLTRVQLVETDL-KALEPELRKAVNFLELENCVQR--KHNEIYQYERYVNMKNLG 66
+E + KL++++ + + K LE K ELEN + K NE+ Q ++ N+K
Sbjct: 597 KETSSKLSKIEFEKRQIRKELEHYKEKGERAEELENELHHLEKENELLQ-KKITNLKITC 655
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
E ++Q EL +KK D ++ +L+++EK+ + + + R +V S K
Sbjct: 656 EKIEALEQENSELERENRKLKKTLDGFKNLTFQLESLEKENSQLDEENLELRRNVESLKC 715
Query: 127 RFECDIAKSELEIF-LSTQSKETKKLADL-EANLEKVQTTLTERKTLCEELTTRVPAMES 184
+A+ +LE L ++ ++ KK +L +A+ +K + + L E A+E+
Sbjct: 716 A-SMKMAQLQLENKELESEKEQLKKGLELMKASFKKTERLEVSYQGLDTENQRLQKALEN 774
Query: 185 ---EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+I + + L DL E L +E+L ++S KR Q + N L QL+ +
Sbjct: 775 SNKKIQQLESELQDLEVENQTLQKNLEEL--KISSKRLE-QLEKENKSLEQETSQLEKDK 831
Query: 242 R 242
+
Sbjct: 832 K 832
Score = 67 (28.6 bits), Expect = 6.1e-07, Sum P(2) = 6.1e-07
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+++L K LE+KE+++A+LE L + ++ +L + KQ D
Sbjct: 962 ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRQELKTVKKNYEALKQRQD 1012
Score = 50 (22.7 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 15/35 (42%), Positives = 22/35 (62%)
Query: 475 VKD--LEVKEKRLASLETELRILSQQKMEVETQLN 507
VKD +EV E+ A+L+ E + L Q ++ETQ N
Sbjct: 1044 VKDRLIEV-ERNNATLQAEKQALKTQLKQLETQNN 1077
Score = 40 (19.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 11/29 (37%), Positives = 17/29 (58%)
Query: 478 LEVKEKRLASLETELRILSQQKMEVETQL 506
L+VK+ RL +E L +K ++TQL
Sbjct: 1042 LKVKD-RLIEVERNNATLQAEKQALKTQL 1069
Score = 40 (19.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 12/53 (22%), Positives = 24/53 (45%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+LEV+ K L +L Q ++E L ++ + + ++T + K
Sbjct: 1189 KNLEVEHKDLEDRYNQLLKRKGQLEDLEKTLKVEQEKMLLENKNHETIAAEYK 1241
Score = 39 (18.8 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 16/57 (28%), Positives = 32/57 (56%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLN--CTG-NELKYKKQEYDTCLID 526
SL+ + ++++ RL + ++L+ QQ T+LN C ++LK +E + L+D
Sbjct: 1273 SLLNNSKLEQTRLEAEFSKLKEQYQQLDITSTKLNNQCELLSQLKGNLEEENRHLLD 1329
>POMBASE|SPAC10F6.09c [details] [associations]
symbol:psm3 "mitotic cohesin complex subunit Psm3"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000794 "condensed nuclear chromosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005694 "chromosome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IMP] [GO:0008278 "cohesin complex" evidence=IDA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISM] [GO:0030892 "mitotic cohesin
complex" evidence=NAS] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 PomBase:SPAC10F6.09c Pfam:PF02463
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GO:GO:0051301
GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0016567 GO:GO:0000790
GO:GO:0000794 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0030892 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF PIR:T37503
RefSeq:NP_593260.1 ProteinModelPortal:O42649 IntAct:O42649
STRING:O42649 EnsemblFungi:SPAC10F6.09c.1 GeneID:2543010
KEGG:spo:SPAC10F6.09c OrthoDB:EOG4TB7KF NextBio:20804043
Uniprot:O42649
Length = 1194
Score = 155 (59.6 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 81/375 (21%), Positives = 160/375 (42%)
Query: 15 KLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQ 74
+L RV+ + D + K+ LEL++ + E + + + L E E+K+ +
Sbjct: 282 ELLRVEKQQNDEDYTN--IMKSKVALELQSSQLSRQIEFSKKDESSKLNILSELESKISE 339
Query: 75 MEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAK 134
E EL+ L E + + + K ++ +++ + R S F+ K + I
Sbjct: 340 KENELSEILPKYNAIVSEADDLNKRIMLL--KNQKQSLLDKQSRTSQFTTKKERDEWIRN 397
Query: 135 SELEIFLSTQS-KETKKLADLEAN-LE-KVQTTLTERKTLCEELTTRVPAMESEIA---- 187
L+I + S KE E + +E +++ L+ +K + L ++ M +A
Sbjct: 398 QLLQINRNINSTKENSDYLKTEYDEMENELKAKLSRKKEIEISLESQGDRMSQLLANITS 457
Query: 188 --ESRARLAD----LTREEAKLLDQVEKLAREVSEKRESMQTS--RSNNRLIDFVMQLKS 239
E + L D L REEAKL +E + ++S +++ T+ R+ + I V +
Sbjct: 458 INERKENLTDKRKSLWREEAKLKSSIENVKDDLSRSEKALGTTMDRNTSNGIRAVKDIAE 517
Query: 240 ENRVSXXXXXXXXXXXXXQKYDIAV-STACGALNYIVTETVEAGEAVIAAVKRQNVGRVN 298
++ ++ +AV +TA +L +IV + E ++ + ++N GRV
Sbjct: 518 RLKLEGYYGPLCELFKVDNRFKVAVEATAGNSLFHIVVDNDETATQILDVIYKENAGRVT 577
Query: 299 VIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
+PL+K++ + Y + +P LI ++ D K A +T+V + A +
Sbjct: 578 FMPLNKLRP-KAVTYPD--ASDALP-LIQYLEF-DPKFDAAIKQVFSKTIVCPSIETASQ 632
Query: 359 IGYSGGGYRMVTLEG 373
S +TL G
Sbjct: 633 YARSHQ-LNGITLSG 646
Score = 44 (20.5 bits), Expect = 7.7e-07, Sum P(2) = 7.7e-07
Identities = 13/61 (21%), Positives = 32/61 (52%)
Query: 456 NPIRGLMGRKATVS-TDTSLVKDLEVK-EKRLASLETELRILSQQKMEVETQLNCTGNEL 513
NP++ +G + ++ + VK +K E +L +++ L +Q + ++++ NEL
Sbjct: 830 NPLKAEIGSDNRIDESELNSVKRSLLKYENKLQIIKSSSSGLEEQMQRINSEISDKRNEL 889
Query: 514 K 514
+
Sbjct: 890 E 890
>UNIPROTKB|F1MY41 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9913 "Bos taurus" [GO:0000796 "condensin complex"
evidence=ISS] [GO:0046982 "protein heterodimerization activity"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0000228
"nuclear chromosome" evidence=ISS] [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0046982 GO:GO:0007076
GO:GO:0000228 GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:DAAA02024368 IPI:IPI01001793 Ensembl:ENSBTAT00000011562
NextBio:20877854 Uniprot:F1MY41
Length = 1191
Score = 146 (56.5 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 96/401 (23%), Positives = 168/401 (41%)
Query: 14 EKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQ 73
+ LT Q V T ++ +K N EN +RK E E + K L E +V+
Sbjct: 301 DALTEAQRVNTKSQSAFDFKKK--NLASEEN--KRKELEKNMVE---DSKTLAAKEKEVK 353
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVE------KKGKESNVIGSKFRWSVFSAKTR 127
++ L+A E+ K + + A+ V + G E+ + G +KT+
Sbjct: 354 KITDGLSALQEASNKDAEALAVAQQHFNAVSAGLSSNEDGAEATLAGQMMACKNEISKTQ 413
Query: 128 FECDIAKSELEIF---LSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
E A+ +L+ L T+ E KK+ ++ K Q L K L E+L T + +
Sbjct: 414 TEAKQAQMKLKHAQQELKTKQTEIKKM---DSGYRKDQEALEAVKKLKEKLETEMKRLNY 470
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQT--SRSNNRLIDFVMQLKSENR 242
E E++ EE+ LL++ +L+R++S +E+ + +R N + K+ NR
Sbjct: 471 E--ENK--------EES-LLERRRQLSRDISRLKETEEALLARFPNLRFAYRDPEKNWNR 519
Query: 243 VSXXXXXXXXXXXXXQKYDIAVSTACGALNY-IVTETVEAGEAVIAAVKRQNVGRVNVIP 301
A+ G Y +V +T G+ ++ K + R +IP
Sbjct: 520 NCVKGLVASLISVKDSSATTALELVAGDRLYNVVVDTEVTGKKLLE--KGELKRRYTIIP 577
Query: 302 LDKMQQYHSQCY--DKYRT------PENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDL 353
L+K+ S+C + R P NV + L++ + E ++ A F T V ++
Sbjct: 578 LNKIS---SRCIAPETLRIAQNLVGPNNVHVALSLVEYKPE-LQKAMEFVFGMTFVCDNM 633
Query: 354 NQAKRIGYSGGGY-RMVTLEGAIIEPSETLVAQDLNQAKRI 393
+ AK++ + R VTL G + +P TL +QA I
Sbjct: 634 DNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASI 674
Score = 141 (54.7 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 55/235 (23%), Positives = 109/235 (46%)
Query: 15 KLTRVQLVETDLKALEPELRKAVNFL-ELENCVQRKHNEIYQYERYVNMKNLGEHETKVQ 73
K ++ V+ +L+ E ELR L L+N ++ + Q+E +L +TK+Q
Sbjct: 677 KFQELKDVQDELRTKENELRALEEELANLKNTAEKYRHLKQQWEMKAEEVDL--LQTKLQ 734
Query: 74 QME-QELTANLESIKKCTDEMESAKSELKTVEKKGKES-NVIGSKFRWSVFSAKTRFECD 131
Q + L+++KK +E E K ++KK +E V+ +K + + A+ E
Sbjct: 735 QSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNA--EAERERELK 792
Query: 132 IAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRA 191
A+ +L+ + +KK+ + + +E + L E + ++ A++ I
Sbjct: 793 DAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELRREHASYEQQLEAVKEAIISYEG 852
Query: 192 RLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDF--VMQLKSENRVS 244
++A + E AK + V K EVS+++E + T++ N + + Q K +N S
Sbjct: 853 QIAVMASEVAKNEELVNKAQEEVSKQKEVI-TAQDNIIKAKYAEIAQHKEQNNES 906
Score = 51 (23.0 bits), Expect = 1.4e-06, Sum P(2) = 1.4e-06
Identities = 14/54 (25%), Positives = 33/54 (61%)
Query: 479 EVKEKRLASLETEL-RIL--SQQKME-VETQLNCTGNELKYKKQEYDTCLIDVK 528
EV E ++ + E E R L +Q+K++ +T+ + + ++K K+QE + ++++
Sbjct: 774 EVLENKMKNAEAERERELKDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELE 827
Score = 37 (18.1 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 11/47 (23%), Positives = 23/47 (48%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
++ +LE + AS E +L + + + E Q+ +E+ K +E
Sbjct: 821 AITLELEELRREHASYEQQLEAVKEAIISYEGQIAVMASEVA-KNEE 866
>ZFIN|ZDB-GENE-070822-12 [details] [associations]
symbol:smyhc2 "slow myosin heavy chain 2"
species:7955 "Danio rerio" [GO:0016459 "myosin complex"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051015 "actin filament
binding" evidence=IEA] [GO:0031444 "slow-twitch skeletal muscle
fiber contraction" evidence=IGI] [GO:0003779 "actin binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-070822-12 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GO:GO:0031444 HOVERGEN:HBG004704 HOGENOM:HOG000173959
GeneTree:ENSGT00680000099788 EMBL:CU929259 UniGene:Dr.75622
EMBL:BK006466 IPI:IPI00496068 RefSeq:NP_001096096.2
UniGene:Dr.161747 STRING:B6IDE1 Ensembl:ENSDART00000056849
GeneID:100124599 KEGG:dre:100124599 CTD:100124599 NextBio:20788746
Uniprot:B6IDE1
Length = 1939
Score = 148 (57.2 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 71/361 (19%), Positives = 159/361 (44%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ AL+ + K + L+ Q+ +++ E
Sbjct: 960 LELTLAKVEKEKHATENKVKNLTEEMAALDEIIAKLTKEKKALQEAHQQTLDDLQSEEDK 1019
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +E+ ++ K
Sbjct: 1020 VN--TLTKAKAKLEQQVDDLEGSLEQEKKIRMDLERAKRKLEGDLKLTQENLMDLENDKQ 1077
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE S++E + +++ KKL +L+A +E+++ L + ++
Sbjct: 1078 QMEERLKKKDFEISQLNSKIEDEQALEAQLQKKLKELQARIEELEEELEAERAARAKVEK 1137
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ + E+ E RL + A ++ +K E + R ++ + + ++
Sbjct: 1138 QRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATASTLRK 1197
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + VS QK + S L + + V E ++ A + N+ ++
Sbjct: 1198 KHADSVSDLGEQIDNLQRVKQKLEKEKSE----LRLELDDVVSNMEQIVKA--KANLEKM 1251
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M +Y ++ + RT + + ++Q E L+ +++LV+Q L + K
Sbjct: 1252 CRTLEDQMSEYRTKAEEGQRTINDFT--MQKAKLQTENGELSRQLEEKDSLVSQ-LTRGK 1308
Query: 358 R 358
+
Sbjct: 1309 Q 1309
Score = 53 (23.7 bits), Expect = 1.5e-06, Sum P(2) = 1.5e-06
Identities = 21/106 (19%), Positives = 49/106 (46%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAI--IEPSGTMSGG-GSNPIRGLMGRKATVSTDTSLVKD 477
L++A++I GG ++ LE + +E M S+ ++G+ + + T ++
Sbjct: 1800 LDEAEQIAMKGGKKQVQKLESRVRELESEVEMEQRKASDSVKGVRKYERRIKELTYQTEE 1859
Query: 478 LEVKEKRLASL--ETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
RL L + +L++ S ++ E + N K++K +++
Sbjct: 1860 DRKNLARLQDLVDKLQLKVKSYKRTAEEAEEQANSNLGKFRKLQHE 1905
Score = 49 (22.3 bits), Expect = 3.9e-06, Sum P(2) = 3.9e-06
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
+ L + L K + LE + L Q+K E++T L L++++
Sbjct: 1513 SDLTEQLGESGKNIHELEKVRKQLEQEKQEIQTALEEAEGSLEHEE 1558
Score = 38 (18.4 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+LE +K SL TEL L E L E K ++E
Sbjct: 1469 ELESAQKESRSLSTELFKLKNSYEESLDHLESMKRENKNLQEE 1511
Score = 37 (18.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 353 LNQAKRIGYSGGGYRMVTLEGAIIE-PSETLVAQ 385
L++A++I GG ++ LE + E SE + Q
Sbjct: 1800 LDEAEQIAMKGGKKQVQKLESRVRELESEVEMEQ 1833
Score = 37 (18.1 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 387 LNQAKRIGYSGGGYRMVTLEGAIIE-PSETLVAQ 419
L++A++I GG ++ LE + E SE + Q
Sbjct: 1800 LDEAEQIAMKGGKKQVQKLESRVRELESEVEMEQ 1833
>ASPGD|ASPL0000036762 [details] [associations]
symbol:AN2963 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008278 "cohesin
complex" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0007064 "mitotic sister chromatid
cohesion" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0006310
GO:GO:0030261 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000195481 KO:K06636 OMA:NALVCET OrthoDB:EOG42VCQD
RefSeq:XP_660567.1 ProteinModelPortal:Q5B917 SMR:Q5B917
STRING:Q5B917 EnsemblFungi:CADANIAT00010118 GeneID:2874104
KEGG:ani:AN2963.2 Uniprot:Q5B917
Length = 1261
Score = 133 (51.9 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 90/385 (23%), Positives = 162/385 (42%)
Query: 19 VQLVETDLKALEPELRKAVNFL-ELENCVQRKHNEIYQYERYVNMKNLG-EHETKVQQME 76
V E ++ E E+ +A N L ++ V ++ +Y + +G E +T+ ++
Sbjct: 315 VATAEKNIVKKEKEIEEATNALVPIDEKVDITKRKVERYSSRI--AEIGKERDTQSASIK 372
Query: 77 QELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGS----KFRWSVF--SAKTRFEC 130
Q L NL+ ++K + E+ K + K+G + + K + V S+ + +
Sbjct: 373 Q-LQKNLKVVEKAQAQWEADWQ--KALSKQGGQLSQADQQEYHKLKEEVNKRSSAEQLKL 429
Query: 131 DIAK----SELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESE- 185
D K ++ E + S +SK L+ LE L+ERK E T + + E E
Sbjct: 430 DNLKRQRKTDAEAYNSLKSKFDSTQWQLQT-LETDTKALSERKAAANE-TVKTTSKEIEK 487
Query: 186 -------IAESRARLADLTRE-EAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
I+ R R++ + E E KL ++KL K+++ + R+ LI + ++
Sbjct: 488 KKKELNAISSERLRVSQMRTEYEEKLQVVLKKLLEADDGKKQTEREIRAKE-LISTLKRI 546
Query: 238 KS--ENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNV 294
+ RVS +KY AVST G + IV + + + I ++ Q
Sbjct: 547 FPGVKGRVSDLCKPKQ------KKYADAVSTVLGRHFDAIVVDNEKTAKECIQHLRDQRA 600
Query: 295 GRVNVIPLDKMQ--QYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQD 352
G+ IPL+ +Q +S +R +D D+ + A +A +V D
Sbjct: 601 GQATFIPLETIQVKALNSNLKGMHRAMRPAIETVDY----DDSVARAITYACGNAIVCDD 656
Query: 353 LNQAKRIGYSGG-GYRMVTLEGAII 376
L AK + Y + VTL+G +I
Sbjct: 657 LATAKYLCYERHVDAKAVTLDGTVI 681
Score = 64 (27.6 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 416 LVAQDLNQAKRIGYSGG-GYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSL 474
+V DL AK + Y + VTL+G +I G M+GG RG ++ + + S
Sbjct: 652 IVCDDLATAKYLCYERHVDAKAVTLDGTVIHKGGLMTGG-----RG--PQQNSKRWEDSE 704
Query: 475 VKDL-EVKEKRLASLETELRILSQQKMEVET-QLNCTGNE--LKYKKQE 519
V+ L ++K+K +A L L ++ E ET Q G E L Y ++E
Sbjct: 705 VESLFKLKDKIMADL-ANLPKGHRRGTEEETLQGELVGLEQRLAYAREE 752
Score = 46 (21.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/46 (30%), Positives = 27/46 (58%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
S +++ EV++ SL E +Q+K+E TQ + N+L +++Q
Sbjct: 820 SNIREYEVQQ---GSLHEEA---AQKKLEFTTQKSRIENQLSFEQQ 859
Score = 45 (20.9 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 13/50 (26%), Positives = 26/50 (52%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEY 520
+ +L +L E+RLA EL+ L + + T+L+ +L+ + +Y
Sbjct: 732 EETLQGELVGLEQRLAYAREELKALERNLKDKYTELDFVKRQLEDLRPKY 781
Score = 41 (19.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 12/56 (21%), Positives = 26/56 (46%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEY 520
+AT SL + + LE+E + + E+ +L+ +L+ +K++Y
Sbjct: 862 QATTDRIASLQAQHQRDANMIGELESEQERVRNKLDELNAELDILREKLEEQKEKY 917
>UNIPROTKB|Q9X0R4 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:243274 "Thermotoga maritima MSB8" [GO:0042802 "identical
protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
EMBL:AE000512 GenomeReviews:AE000512_GR GO:GO:0007062
SUPFAM:SSF75553 KO:K03529 TIGRFAMs:TIGR02168 EMBL:AGIJ01000001
PIR:A72287 RefSeq:NP_228987.1 PDB:1E69 PDB:1GXJ PDB:1GXK PDB:1GXL
PDBsum:1E69 PDBsum:1GXJ PDBsum:1GXK PDBsum:1GXL SMR:Q9X0R4
GeneID:898303 KEGG:tma:TM1182 PATRIC:23937304 OMA:NNEVHAL
ProtClustDB:CLSK875623 EvolutionaryTrace:Q9X0R4 Uniprot:Q9X0R4
Length = 1170
Score = 147 (56.8 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 83/392 (21%), Positives = 167/392 (42%)
Query: 5 YGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNM-K 63
+G+ D+E E+ T+ L+E D K + +L + F ++ + R + K
Sbjct: 269 FGEMDQE-IERYTK--LLE-DYKKRQNDLVEMKGFYS-SKLADSENKYVELSTRLDELEK 323
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
E++ ++++ME + ++ E+E + E + + + + + R +
Sbjct: 324 RREEYKKRLEEMEYIFKGVMGDYERKAKELEKFEKEKENLLSRFNDKEKEFLRVRDEI-- 381
Query: 124 AKTRFECDIAKSELEIFLSTQSKET--KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
++ E I K E E+ ++ E K+ E + + L ++K +E++ RV
Sbjct: 382 --SKLEKQILKLENELLRIGETLEDLEKRRKITENQILTRRRELEDKKNEFKEISRRVEE 439
Query: 182 MESE---IAES----RARLADLTREEAKL---LDQVEKLAREVSEKRE----SMQTSRSN 227
++ E + E R RL ++ E ++ +D EK RE+ ++E M+ R
Sbjct: 440 LDEEEKKLTEELNAVRERLEEIEGEIRRVNLEIDAKEKRLREIQFEKEMIERDMREYRGF 499
Query: 228 NRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGAL-NYIVTETVEAGEAVI 286
+R + V + K R +KY +AVS G IV V+ +A++
Sbjct: 500 SRAVRAVFEEKE--RFPGLVDVVSNLIEVDEKYSLAVSVLLGGTAQNIVVRNVDTAKAIV 557
Query: 287 AAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQV-QDEKIRLAFYFATR 345
+K+ GRV ++PLD + ++ V +DL++ D ++ F F
Sbjct: 558 EFLKQNEAGRVTILPLDLIDGSFNRISGLENERGFVGYAVDLVKFPSDLEVLGGFLFGN- 616
Query: 346 ETLVAQDLNQAKRIGYSGG-GYRMVTLEGAII 376
++V + L+ A R+ R+ TL+G +I
Sbjct: 617 -SVVVETLDDAIRMKKKYRLNTRIATLDGELI 647
Score = 131 (51.2 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 131/551 (23%), Positives = 224/551 (40%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNM-KNLGEH 68
+E T +L +Q + L+ E RK + F + E ++K NE + N+ K L E
Sbjct: 209 KEYTAQLEELQKIYYG-NVLKRE-RKKLEFYQEE---EKKTNE-----KIKNIQKELVEL 258
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKT-VEKKG-KESNVIGSKFRWSVFSA-- 124
ETK + E + I++ T +E K VE KG S + S+ ++ S
Sbjct: 259 ETKWSTLRSEFGEMDQEIERYTKLLEDYKKRQNDLVEMKGFYSSKLADSENKYVELSTRL 318
Query: 125 ----KTRFECDIAKSELE-IFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
K R E E+E IF +K +LE EK + L R E+ RV
Sbjct: 319 DELEKRREEYKKRLEEMEYIFKGVMGDYERKAKELE-KFEKEKENLLSRFNDKEKEFLRV 377
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKS 239
EI++ ++ L E ++ + +E L + + T R L D + K
Sbjct: 378 ---RDEISKLEKQILKLENELLRIGETLEDLEKRRKITENQILTRR--RELEDKKNEFKE 432
Query: 240 -ENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVN 298
RV + G + + E ++A E + ++ +
Sbjct: 433 ISRRVEELDEEEKKLTEELNAVRERLEEIEGEIRRVNLE-IDAKEKRLREIQFEK----E 487
Query: 299 VIPLDKMQQYH--SQCYDK-YRTPENVPRLID----LIQVQDEKIRLAFYF---ATRETL 348
+I D M++Y S+ + E P L+D LI+V DEK LA T + +
Sbjct: 488 MIERD-MREYRGFSRAVRAVFEEKERFPGLVDVVSNLIEV-DEKYSLAVSVLLGGTAQNI 545
Query: 349 VAQDLNQAKRI----GYSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVT 404
V ++++ AK I + G R+ L +I+ S ++ N+ +GY+ + +
Sbjct: 546 VVRNVDTAKAIVEFLKQNEAG-RVTILPLDLIDGSFNRISGLENERGFVGYAVDLVKFPS 604
Query: 405 -LE--GAIIEPSETLVAQDLNQAKRIGYSGG-GYRMVTLEGAIIEPSGTMSGGGSNPIRG 460
LE G + ++V + L+ A R+ R+ TL+G +I G ++GG
Sbjct: 605 DLEVLGGFLF-GNSVVVETLDDAIRMKKKYRLNTRIATLDGELISGRGAITGGREERSSN 663
Query: 461 LMGRKATVSTDTSLVKDLE--VKEKR--LASLETELRILSQQKMEVETQLNCTGNELKYK 516
+ R+ + +++ E + EKR LASL+TE L Q+ V+ +L EL K
Sbjct: 664 VFERRIKLKHLEQEMEETERQIAEKRDELASLKTEQENLKNQEALVQRELF----ELSRK 719
Query: 517 KQEYDTCLIDV 527
T L ++
Sbjct: 720 SSSTKTVLSEI 730
Score = 124 (48.7 bits), Expect = 0.00056, P = 0.00056
Identities = 56/251 (22%), Positives = 112/251 (44%)
Query: 5 YGKYDEERTEKLTRVQ--LVETDLK--ALEPEL----RKAVNFLELENCVQRKHNEIYQY 56
Y + +++ EK+ +Q LVE + K L E ++ + +L +++ N++ +
Sbjct: 237 YQEEEKKTNEKIKNIQKELVELETKWSTLRSEFGEMDQEIERYTKLLEDYKKRQNDLVEM 296
Query: 57 ERYVNMKNLGEHETKVQQME---QELTANLESIKKCTDEMESA-KSELKTVEKKGKESNV 112
+ + + K L + E K ++ EL E KK +EME K + E+K KE
Sbjct: 297 KGFYSSK-LADSENKYVELSTRLDELEKRREEYKKRLEEMEYIFKGVMGDYERKAKELE- 354
Query: 113 IGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLC 172
KF + +RF D K L + SK K++ LE L ++ TL + +
Sbjct: 355 ---KFEKEKENLLSRFN-DKEKEFLRV-RDEISKLEKQILKLENELLRIGETLEDLEKRR 409
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
+ ++ E+ + + +++R +L ++ +KL E++ RE ++ R ++
Sbjct: 410 KITENQILTRRRELEDKKNEFKEISRRVEELDEEEKKLTEELNAVRERLEEIEGEIRRVN 469
Query: 233 FVMQLKSENRV 243
+ K E R+
Sbjct: 470 LEIDAK-EKRL 479
>MGI|MGI:1925177 [details] [associations]
symbol:Ccdc88a "coiled coil domain containing 88A"
species:10090 "Mus musculus" [GO:0000226 "microtubule cytoskeleton
organization" evidence=IEA] [GO:0001932 "regulation of protein
phosphorylation" evidence=IDA] [GO:0003779 "actin binding"
evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0006260 "DNA replication"
evidence=IEA] [GO:0006275 "regulation of DNA replication"
evidence=IMP] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008017 "microtubule binding" evidence=IDA]
[GO:0010975 "regulation of neuron projection development"
evidence=IDA] [GO:0016020 "membrane" evidence=ISO] [GO:0016044
"cellular membrane organization" evidence=ISO] [GO:0016477 "cell
migration" evidence=ISO] [GO:0030027 "lamellipodium" evidence=ISO]
[GO:0030032 "lamellipodium assembly" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=ISO] [GO:0031929 "TOR signaling
cascade" evidence=IDA] [GO:0032148 "activation of protein kinase B
activity" evidence=IDA] [GO:0032956 "regulation of actin
cytoskeleton organization" evidence=ISO] [GO:0035091
"phosphatidylinositol binding" evidence=ISO] [GO:0042127
"regulation of cell proliferation" evidence=IMP] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0042995 "cell
projection" evidence=IEA] [GO:0043422 "protein kinase B binding"
evidence=ISO;IPI] InterPro:IPR008636 Pfam:PF05622 MGI:MGI:1925177
GO:GO:0005783 GO:GO:0005829 GO:GO:0005886 GO:GO:0005794
GO:GO:0003779 GO:GO:0042803 GO:GO:0000226 GO:GO:0016477
GO:GO:0006275 GO:GO:0031929 GO:GO:0006260 GO:GO:0031410
GO:GO:0030027 GO:GO:0016023 GO:GO:0042127 GO:GO:0032148
eggNOG:NOG12793 GO:GO:0035091 GO:GO:0032956 GO:GO:0030032
GO:GO:0008017 GO:GO:0010975 GO:GO:0016044 HSSP:P25054 EMBL:AL935054
GeneTree:ENSGT00690000101702 EMBL:BX284634 HOVERGEN:HBG057867
CTD:55704 OMA:TGFRSKQ EMBL:AB087827 EMBL:BC037020 EMBL:AK082771
IPI:IPI00461244 IPI:IPI00551498 IPI:IPI00648605 RefSeq:NP_789811.2
UniGene:Mm.338284 UniGene:Mm.441367 ProteinModelPortal:Q5SNZ0
SMR:Q5SNZ0 IntAct:Q5SNZ0 STRING:Q5SNZ0 PhosphoSite:Q5SNZ0
PaxDb:Q5SNZ0 PRIDE:Q5SNZ0 Ensembl:ENSMUST00000040182
Ensembl:ENSMUST00000109477 Ensembl:ENSMUST00000140194
Ensembl:ENSMUST00000155854 GeneID:108686 KEGG:mmu:108686
UCSC:uc007igw.1 OrthoDB:EOG4W6NV4 NextBio:361223 Bgee:Q5SNZ0
CleanEx:MM_CCDC88A Genevestigator:Q5SNZ0 Uniprot:Q5SNZ0
Length = 1873
Score = 133 (51.9 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 60/241 (24%), Positives = 110/241 (45%)
Query: 10 EERTEKLTRVQLVETDLKA-LEPELRKAVNFLELENCVQR--KHNEIYQYERYVNMKNLG 66
+E KL++++ + +K LE K ELEN + K NE+ Q ++ N+K
Sbjct: 597 KETCGKLSKIEFEKRQMKKELELYKEKGERAEELENELNHLGKENELLQ-KKITNLKITC 655
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
E ++Q EL KK D ++ +L+++EK+ + + + R SV S K
Sbjct: 656 EKLETLEQENSELERENRKFKKTLDSFKNLTFQLESLEKENSQLDEENLELRRSVESLKC 715
Query: 127 RFECDIAKSELEIF-LSTQSKETKKLADL-EANLEKVQTTLTERKTLCEELTTRVPAMES 184
+A+ +LE L ++ ++ +K +L A+ +K + + L E A+E+
Sbjct: 716 A-SMRMAQLQLENKELESEKEQLRKGLELMRASFKKTERLEVSYQGLDTENQRLQKALEN 774
Query: 185 ---EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+I + + L DL E L +E+L ++S KR Q + N L QL+ +
Sbjct: 775 SNKKIQQLESELQDLEMENQTLQKSLEEL--KISSKRLE-QLEKENKSLEQETSQLEKDK 831
Query: 242 R 242
+
Sbjct: 832 K 832
Score = 66 (28.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 14/51 (27%), Positives = 27/51 (52%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+++L K LE+KE+++A+LE L + ++ +L + KQ D
Sbjct: 962 ESTLKKSLEIKEEKIAALEARLEESTNYNQQLRHELKTVKKNYEALKQRQD 1012
Score = 56 (24.8 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 463 GRKATVSTDTSL-VKD--LEVKEKRLASLETELRILSQQKMEVETQLN 507
GR++ +T L VKD +EV E+ A+L+ E + L Q ++ETQ N
Sbjct: 1031 GRESQEATRELLKVKDRLIEV-ERNNATLQAEKQALKTQLKQLETQNN 1077
>DICTYBASE|DDB_G0272368 [details] [associations]
symbol:ndm "macropinocytosis suppressor Ndm"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0060187 "cell pole"
evidence=IDA] [GO:0031941 "filamentous actin" evidence=IDA]
[GO:0071944 "cell periphery" evidence=IDA] [GO:0044351
"macropinocytosis" evidence=IMP] [GO:0031268 "pseudopodium
organization" evidence=IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0006935 "chemotaxis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IDA] dictyBase:DDB_G0272368 GO:GO:0005634 GO:GO:0016020
GO:GO:0006935 GO:GO:0071944 EMBL:AAFI02000008 eggNOG:NOG12793
GO:GO:0044351 GO:GO:0031268 RefSeq:XP_645158.1
ProteinModelPortal:Q86KX8 EnsemblProtists:DDB0216970 GeneID:8618329
KEGG:ddi:DDB_G0272368 InParanoid:Q86KX8 OMA:KFDEKQQ Uniprot:Q86KX8
Length = 1781
Score = 146 (56.5 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 56/240 (23%), Positives = 116/240 (48%)
Query: 7 KYDEERTEKLTRVQLVETD-LKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNL 65
K E +TEKL ++ + ETD L+ + L V + LEN K N+ Y + + K +
Sbjct: 120 KQIEIQTEKLEKL-INETDKLRCDKSNLE--VRIVHLEN--SNKENKSYLLQ---SNKEM 171
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK--ESNVIGSKFRWSVFS 123
G+ E ++QQ++++LT + E ++E+ ++ + K + E + + +++ +
Sbjct: 172 GKMEIEIQQLQEQLTDSKEQESNQRSKIENKDIMIQQLRDKQQQYEKELRELQHQFNADN 231
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
K + DI E+ ++ +KL + L+ Q L E + L +L +V ++
Sbjct: 232 EKNQQIIDIQSEEISTSTLIMTELEEKLEFVSDKLKSEQEKLKESEILIMDLQIQVSDLQ 291
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
S + R L E + L V +L +E++EK ++ +T + LID + + ++ ++
Sbjct: 292 STSDDDNERYQSLISEYQENLKSVSQLNKEINEKLKNERTESKS--LIDKISKENNDYQI 349
Score = 128 (50.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 54/237 (22%), Positives = 113/237 (47%)
Query: 11 ERTEKLT-RVQLVETDLKALEPELRKAVNFLELENCVQR----KHNEIYQYERY-VNMKN 64
E ++LT +QL + DL + +L+K N ++++ + K N +RY V
Sbjct: 733 ESIDQLTSELQLKQDDLNRQQEQLQK--NSIDIDQLFDKINLGKSNFDELNQRYQVEQNQ 790
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
L K Q ++Q + ES K T ++E + ++K V ++ +SN G ++
Sbjct: 791 L--FNLK-QDLQQSINLFNES-KLYTTQLEKSIEQVKRVNEE--QSNHQGEL---TILLD 841
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+ R++C K +LE ++ L +E+++ L+E K L +E + E
Sbjct: 842 EERYKCQTLKMDLENSKQINQNQSDDLNFYNNQIEQLKQQLSESKELVQECKLSISQFEK 901
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ E + + +L+ E+ + + + L+ ++S+ + +SN++L + + QL+S N
Sbjct: 902 TVIELQLEIKELSNEKQQYQETCQSLSLKLSKLND-----QSNDQL-EQIQQLQSSN 952
Score = 52 (23.4 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 10/41 (24%), Positives = 24/41 (58%)
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNE 512
T + ++ K+K + +L ++L+ L+ ++ + Q+N NE
Sbjct: 433 TQRINEIIDKQKEIDNLNSDLQSLNDKQSDSNDQINTITNE 473
Score = 48 (22.0 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 17/60 (28%), Positives = 28/60 (46%)
Query: 458 IRGLMGRKATVSTDTS-LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYK 516
++ L + T S + S L+ DL + + L E +S + + QL+ NELK K
Sbjct: 358 LKDLKSQLDTKSNNYSKLLDDLSLSKLNYNKLNLEFNNISNEYQIEKQQLSFDFNELKKK 417
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 11/37 (29%), Positives = 21/37 (56%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
DL+ + +++ L+ L S K +++ QLN NE+
Sbjct: 955 DLQNSQNQISLLQDSLNETSDLKSQLQCQLN-ESNEI 990
Score = 46 (21.3 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 9/56 (16%), Positives = 29/56 (51%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKS 529
L + L K+ +++L+ ++++ + K ++ ++ N + K + L+D+ +
Sbjct: 1268 LKQQLFEKQDEISTLKQDIQLFNSNKKNSDSSIDQLSNHVTELKSKNQQLLLDLSN 1323
Score = 41 (19.5 bits), Expect = 3.5e-05, Sum P(2) = 3.5e-05
Identities = 7/23 (30%), Positives = 17/23 (73%)
Query: 474 LVKDLEVKEKRLASLETELRILS 496
L+K ++ EK++ +LE++L ++
Sbjct: 1668 LIKKNKIDEKKIRTLESKLNSIN 1690
Score = 40 (19.1 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 10/46 (21%), Positives = 20/46 (43%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
L L+ K + L +L + ++ + N NE + +KQ+
Sbjct: 361 LKSQLDTKSNNYSKLLDDLSLSKLNYNKLNLEFNNISNEYQIEKQQ 406
Score = 39 (18.8 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 8/41 (19%), Positives = 22/41 (53%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
L +DL + ++ L+ +L+I + +++E ++ +K
Sbjct: 1058 LQQDLSTSDYKIQQLQIDLQIDKDEIIKLEETISQRNQSIK 1098
>UNIPROTKB|Q90988 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9031 "Gallus gallus" [GO:0000796 "condensin complex"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0005694 GO:GO:0051301 GO:GO:0007067 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553 KO:K06674
PANTHER:PTHR18937:SF9 EMBL:X80792 IPI:IPI00579121 PIR:A54817
RefSeq:NP_990561.1 UniGene:Gga.4066 ProteinModelPortal:Q90988
PRIDE:Q90988 GeneID:396156 KEGG:gga:396156 CTD:10592
HOVERGEN:HBG106605 NextBio:20816212 Uniprot:Q90988
Length = 1189
Score = 145 (56.1 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 106/536 (19%), Positives = 221/536 (41%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELE-NCVQRKHNEIYQYERYVNMKNL 65
K +EE KL ++ ++L+ ++ ++R ++ + N + + E+ + + K
Sbjct: 287 KNNEEFGAKLHSLEAAFSELQRVDAKVRSDLDHRKQNLNSEENRLKELIKIMQE-EFKAF 345
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAK 125
E +++++++ L E KK + + SA+ V G SN G +
Sbjct: 346 TSKEKEIKKIKEGLNGLQEESKKDAEALASAQQHFNAVSA-GLSSNDSGQGTSLADQMMT 404
Query: 126 TRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESE 185
+ E A +E + ++L +A ++K+ + E + E + ++ E
Sbjct: 405 CKNEISKAATEAKQAQMKLKYAQQELKTKQAEVKKMDGSYKEDQEAFEAIRKTKEKLQDE 464
Query: 186 IAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVSX 245
+ + + A+ +EA L + ++L+ E+S RE ++ + + + F + +N
Sbjct: 465 MKKLKYEEAE---QEAHLAKK-KQLSSEISSLRELCESIEAKHPYLRFEYKNPEKNWNPN 520
Query: 246 XXXXXXXXXXXXQKYDIAVSTAC-----GALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
+ DI+ S A G L IV +T G+ ++ K Q R +I
Sbjct: 521 CVKGLVVTLITVK--DISTSKALEAVAGGKLYNIVVDTEATGKKILE--KGQLKHRYTII 576
Query: 301 PLDKMQQYHSQCYDKYRTPEN------VPRLIDLIQVQDEKIRLAFYFATRETLVAQDLN 354
PL K+ +S ++ +N V I LI E ++ A + TLV ++
Sbjct: 577 PLSKISA-NSIGHEIISLAKNLIGHREVHIAISLIDYNSE-LQKAMEYVFGTTLVCSSMD 634
Query: 355 QAKRIGYSGGGYRM-VTLEGAIIEPSETL-------VAQDLNQAKRIGYSGGGYRMVTLE 406
AK++ + R VTL+G I +P TL V L++ K + + ++ T +
Sbjct: 635 NAKKVTFDKRIMRKTVTLQGDIFDPQGTLSGGASSHVTPILSKLKTMRDAEDELKIKTSQ 694
Query: 407 GAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKA 466
+E +E +A N A++ + + M + E +++ S L+ K
Sbjct: 695 ---LEATEKELANLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQ-EDLLALKK 750
Query: 467 TVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
T++ +K E +++ E E + L + E + G E+K +Q+ ++
Sbjct: 751 TIAECEETLKKTEESQRKA---EEEYKALENKMKNAEAE---RGKEIKNAQQKLNS 800
Score = 48 (22.0 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 479 EVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK--QEYDTCLIDVKSPK 531
E ++ +ASL+ ++ L + ++ L NEL +K E T I KS K
Sbjct: 841 EAAQQAIASLKEQVSALEAEAVKTRESLKNAENELSSEKGLMEERTKDIKAKSAK 895
Score = 43 (20.2 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 13/57 (22%), Positives = 29/57 (50%)
Query: 476 KDLEVKEKRL-ASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
K LE K K A E++ Q+ + + + + ++K K+QE + +++++ K
Sbjct: 774 KALENKMKNAEAERGKEIKNAQQKLNSAKKKADDSSRKMKEKQQEVEALVLELEQLK 830
Score = 39 (18.8 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 8/45 (17%), Positives = 24/45 (53%)
Query: 478 LEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL-KYKKQEYD 521
+E + K + + ++ +Q E++ +N +++ KY+++ D
Sbjct: 882 MEERTKDIKAKSAKIEKYREQNNELQLSINALEHDINKYQQETAD 926
>SGD|S000005194 [details] [associations]
symbol:RAD50 "Subunit of MRX complex with Mre11p and Xrs2p"
species:4932 "Saccharomyces cerevisiae" [GO:0004518 "nuclease
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030870 "Mre11 complex"
evidence=IEA;IPI] [GO:0003691 "double-stranded telomeric DNA
binding" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006284 "base-excision repair" evidence=IMP] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA;IMP] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0042162 "telomeric DNA binding" evidence=IDA]
[GO:0006303 "double-strand break repair via nonhomologous end
joining" evidence=IMP] [GO:0032078 "negative regulation of
endodeoxyribonuclease activity" evidence=IDA] [GO:0051880
"G-quadruplex DNA binding" evidence=IDA] [GO:0043047
"single-stranded telomeric DNA binding" evidence=IDA] [GO:0000706
"meiotic DNA double-strand break processing" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=ISS;IDA] [GO:0003690
"double-stranded DNA binding" evidence=IDA;IPI] [GO:0000722
"telomere maintenance via recombination" evidence=IMP] [GO:0042138
"meiotic DNA double-strand break formation" evidence=TAS]
[GO:0000727 "double-strand break repair via break-induced
replication" evidence=TAS] [GO:0000723 "telomere maintenance"
evidence=IMP] [GO:0004017 "adenylate kinase activity"
evidence=IMP;IDA] InterPro:IPR004584 InterPro:IPR007517
Pfam:PF04423 SGD:S000005194 GO:GO:0005739 GO:GO:0005524
GO:GO:0005654 GO:GO:0046872 GO:GO:0006284 GO:GO:0008270
EMBL:BK006947 GO:GO:0016887 GO:GO:0004518 GO:GO:0000706
GO:GO:0006303 GO:GO:0000722 EMBL:X96722 GO:GO:0051880 GO:GO:0042138
GO:GO:0043047 GO:GO:0000727 Reactome:REACT_128851 GO:GO:0032078
GO:GO:0004017 eggNOG:COG0419 GO:GO:0030870 GO:GO:0003691 KO:K10866
InterPro:IPR013134 PANTHER:PTHR18867 TIGRFAMs:TIGR00606
PROSITE:PS51131 GeneTree:ENSGT00390000018781 HOGENOM:HOG000192269
OrthoDB:EOG4C2MJW EMBL:X14814 EMBL:Z71526 PIR:S05808
RefSeq:NP_014149.1 ProteinModelPortal:P12753 SMR:P12753
DIP:DIP-2419N IntAct:P12753 MINT:MINT-435300 STRING:P12753
PaxDb:P12753 PeptideAtlas:P12753 EnsemblFungi:YNL250W GeneID:855471
KEGG:sce:YNL250W CYGD:YNL250w OMA:ECFGANC NextBio:979418
Genevestigator:P12753 GermOnline:YNL250W Uniprot:P12753
Length = 1312
Score = 129 (50.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 93/366 (25%), Positives = 163/366 (44%)
Query: 11 ERTEKLTRVQLVETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE 69
E TE + L + E RKA+ E ++C Y R +N
Sbjct: 651 EETELSYKTALENLKMHQTTLEFNRKALEIAERDSCC-------YLCSR--KFENESFKS 701
Query: 70 TKVQQMEQELTANLESIKKCT--DEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA-KT 126
+Q+++ + AN E K T +E E S L+ +EK N I K S K
Sbjct: 702 KLLQELKTKTDANFEKTLKDTVQNEKEYLHS-LRLLEKHIITLNSINEKIDNSQKCLEKA 760
Query: 127 RFECDIAKSEL-EIFL-STQSKETKKLADLEAN--LEKVQTTLTERKTLCEELTTRVPAM 182
+ E +KS+L E+ + ST+ K+ K+LA+ E +EK E K L E +++ +
Sbjct: 761 KEETKTSKSKLDELEVDSTKLKDEKELAESEIRPLIEKFTYLEKELKDL--ENSSKTISE 818
Query: 183 ESEI---AESRARLADLTREEA-KLLDQVEKLAREVSE-KRESMQTSRSNNRLIDFVMQL 237
E I +E + D R++ K+ D + +L + +S+ + E + R N+R+I+ + +
Sbjct: 819 ELSIYNTSEDGIQTVDELRDQQRKMNDSLRELRKTISDLQMEKDEKVRENSRMINLIKE- 877
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
E VS Q D ++ + +N I + E EA I ++K +
Sbjct: 878 -KELTVSEIESSLTQK----QNIDDSIRSKRENINDIDSRVKEL-EARIISLKNKKDEAQ 931
Query: 298 NVIPLDKMQQYHS-QCYDKYRTPENVPRLIDLIQ-VQDEKIRL-AFYFATRETLVAQ-DL 353
+V LDK++ Q +K +T ++ RLID Q + +E + A F +T + + +L
Sbjct: 932 SV--LDKVKNERDIQVRNKQKTVADINRLIDRFQTIYNEVVDFEAKGFDELQTTIKELEL 989
Query: 354 NQAKRI 359
N+A+ +
Sbjct: 990 NKAQML 995
Score = 65 (27.9 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 17/55 (30%), Positives = 33/55 (60%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKS 529
+K+LE+ + ++ L+ +L + S + E + +L + NE K KQ + LI++KS
Sbjct: 984 IKELELNKAQMLELKEQLDLKSNEVNEEKRKLADSNNEEKNLKQNLE--LIELKS 1036
>UNIPROTKB|E2R7R8 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9615 "Canis lupus familiaris" [GO:0051383 "kinetochore
organization" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045132 "meiotic chromosome
segregation" evidence=IEA] [GO:0010032 "meiotic chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0000228 "nuclear
chromosome" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:AAEX03008008 Ensembl:ENSCAFT00000004208 Uniprot:E2R7R8
Length = 1191
Score = 139 (54.0 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 110/542 (20%), Positives = 223/542 (41%)
Query: 2 EVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV- 60
E+ GK D+E KL ++ + + + + + A + L+ +N + N+ + E+ +
Sbjct: 283 ELEKGK-DKEIGGKLRSLEDALAEAQRVNTKSQSAFD-LKKKNLASEE-NKRTELEKNMI 339
Query: 61 -NMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
+ + L E +V+++ L A E+ K + + +A+ V G SN G++
Sbjct: 340 EDSRTLAAKEKEVKKITDGLNALQEASNKDAEALAAAQQHFNAVSA-GLSSNEDGAEA-- 396
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSK---ETKKLADLEANLEKVQTTLTERKTLCEELT 176
++ + DI+K++ E Q K ++L +A ++K+ + RK +E
Sbjct: 397 TLAGQMMACKNDISKAQTEA-KQAQMKLKHAQQELKTKQAEVKKMDSGY--RKD--QEAL 451
Query: 177 TRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQ 236
V ++ ++ +L +E LL++ +L+R++S +E+ + + I F +
Sbjct: 452 EAVKKLKEKLEAEMKKLNYEENKEEGLLEKRRQLSRDISRLKETYEALLARFPNIQFAYR 511
Query: 237 --LKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNY-IVTETVEAGEAVIAAVKRQN 293
K+ NR A+ G Y +V +T G+ ++ K +
Sbjct: 512 DPEKNWNRNCVKGLVASLISVKDTSTTTALELVAGERLYNVVVDTEVTGKKLLE--KGEL 569
Query: 294 VGRVNVIPLDKMQQYHSQCY--DKYRT------PENVPRLIDLIQVQDEKIRLAFYFATR 345
R +IPL+K+ ++C + R P NV + L++ + E ++ A F
Sbjct: 570 KRRYTIIPLNKIS---ARCIAPETLRVAQNLVGPNNVHVALSLVEYKPE-LQKAMEFVFG 625
Query: 346 ETLVAQDLNQAKRIGYSGGGY-RMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVT 404
T V +++ AK++ + R VTL G + +P TL +QA I + V
Sbjct: 626 TTFVCNNMDNAKKVAFDKRIMTRTVTLGGEVFDPHGTLSGGARSQAASILTKFQELKNVQ 685
Query: 405 LEGAIIEPSETLVAQDL----NQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRG 460
E I E + ++L N A++ + M T E +++ S
Sbjct: 686 DELRIKENELQSLDEELAGLKNTAEKYRQLKQQWEMKTEEADLLQTKLQQSSYHKQQ-EE 744
Query: 461 LMGRKATVSTDTSLVKDL-EVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
L K T+ +K+ E+++K E + + E + +L +L + K +
Sbjct: 745 LDALKKTIEESEETLKNTKEIQKKAEEKYEVLENKMKNAEAERDRELKDAQKKLDFAKTK 804
Query: 520 YD 521
D
Sbjct: 805 AD 806
Score = 128 (50.1 bits), Expect = 0.00021, P = 0.00021
Identities = 47/208 (22%), Positives = 95/208 (45%)
Query: 15 KLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERYVNMKNLGEHETKVQ 73
K ++ V+ +L+ E EL+ L L+N ++ Q+E +L +TK+Q
Sbjct: 677 KFQELKNVQDELRIKENELQSLDEELAGLKNTAEKYRQLKQQWEMKTEEADL--LQTKLQ 734
Query: 74 QME-QELTANLESIKKCTDEMESAKSELKTVEKKGKES-NVIGSKFRWSVFSAKTRFECD 131
Q + L+++KK +E E K ++KK +E V+ +K + + + + R E
Sbjct: 735 QSSYHKQQEELDALKKTIEESEETLKNTKEIQKKAEEKYEVLENKMK-NAEAERDR-ELK 792
Query: 132 IAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRA 191
A+ +L+ + +KK+ + + +E + L E K ++ A+ I
Sbjct: 793 DAQKKLDFAKTKADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYEV 852
Query: 192 RLADLTREEAKLLDQVEKLAREVSEKRE 219
++ + E AK + V K EV++++E
Sbjct: 853 QIEAMAVEVAKNKESVNKAQEEVTKQKE 880
Score = 53 (23.7 bits), Expect = 4.7e-06, Sum P(2) = 4.7e-06
Identities = 15/57 (26%), Positives = 34/57 (59%)
Query: 479 EVKEKRLASLETEL-RIL--SQQKME-VETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
EV E ++ + E E R L +Q+K++ +T+ + + ++K K+QE + ++++ K
Sbjct: 774 EVLENKMKNAEAERDRELKDAQKKLDFAKTKADASSKKMKEKQQEVEAITLELEELK 830
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 12/47 (25%), Positives = 26/47 (55%)
Query: 476 KDLEVKE--KRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEY 520
+D E+K+ K+L +T+ S++ E + ++ EL+ K+E+
Sbjct: 787 RDRELKDAQKKLDFAKTKADASSKKMKEKQQEVEAITLELEELKREH 833
>UNIPROTKB|O95347 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein
2" species:9606 "Homo sapiens" [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0010032 "meiotic chromosome condensation"
evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0051383 "kinetochore organization" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0000796 "condensin
complex" evidence=IDA] [GO:0000228 "nuclear chromosome"
evidence=IDA] [GO:0007076 "mitotic chromosome condensation"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0000793
"condensed chromosome" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
Reactome:REACT_115566 Reactome:REACT_21300
Pathway_Interaction_DB:aurora_b_pathway GO:GO:0051301 GO:GO:0006281
GO:GO:0006310 EMBL:CH471105 GO:GO:0007076 GO:GO:0000228
GO:GO:0000796 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06674 PANTHER:PTHR18937:SF9 HOGENOM:HOG000228249 OMA:CQNGKIP
CTD:10592 HOVERGEN:HBG106605 EMBL:AF092563 EMBL:AL833191
EMBL:AL161791 EMBL:AL354938 EMBL:BC130385 EMBL:AF113673
EMBL:BN000163 IPI:IPI00007927 IPI:IPI00232806 RefSeq:NP_001036015.1
RefSeq:NP_001036016.1 RefSeq:NP_001252531.1 RefSeq:NP_006435.2
UniGene:Hs.119023 ProteinModelPortal:O95347 SMR:O95347
DIP:DIP-35422N IntAct:O95347 MINT:MINT-1161754 STRING:O95347
PhosphoSite:O95347 PaxDb:O95347 PRIDE:O95347
Ensembl:ENST00000286398 Ensembl:ENST00000303219
Ensembl:ENST00000374787 Ensembl:ENST00000374793
Ensembl:ENST00000493955 GeneID:10592 KEGG:hsa:10592 UCSC:uc004bbv.3
GeneCards:GC09P106856 H-InvDB:HIX0008250 HGNC:HGNC:14011 MIM:605576
neXtProt:NX_O95347 PharmGKB:PA37833 InParanoid:O95347
OrthoDB:EOG49S65K ChiTaRS:SMC2 GenomeRNAi:10592 NextBio:40225
ArrayExpress:O95347 Bgee:O95347 CleanEx:HS_SMC2
Genevestigator:O95347 GermOnline:ENSG00000136824 Uniprot:O95347
Length = 1197
Score = 139 (54.0 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 85/410 (20%), Positives = 176/410 (42%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELEN--CVQRKHNEIYQYER 58
+E L + D+E L ++ + + + + + A + L+ +N C + K E+ +
Sbjct: 281 IEELEKRKDKETGGILRSLEDALAEAQRVNTKSQSAFD-LKKKNLACEESKRKEL-EKNM 338
Query: 59 YVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFR 118
+ K L E +V+++ L A E+ K + + +A+ V G SN G++
Sbjct: 339 VEDSKTLAAKEKEVKKITDGLHALQEASNKDAEALAAAQQHFNAVSA-GLSSNEDGAEA- 396
Query: 119 WSVFSAKTRFECDIAKSELEIFLSTQSK---ETKKLADLEANLEKVQTTLTERKTLCEEL 175
++ + DI+K++ E Q K ++L + +A ++K+ + RK +E
Sbjct: 397 -TLAGQMMACKNDISKAQTEA-KQAQMKLKHAQQELKNKQAEVKKMDSGY--RKD--QEA 450
Query: 176 TTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQT--SRSNNRLIDF 233
V ++ ++ +L +E LL++ +L+R++ +E+ + +R N +
Sbjct: 451 LEAVKRLKEKLEAEMKKLNYEENKEESLLEKRRQLSRDIGRLKETYEALLARFPNLRFAY 510
Query: 234 VMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNY-IVTETVEAGEAVIAAVKRQ 292
K+ NR A+ G Y +V +T G+ ++ + +
Sbjct: 511 KDPEKNWNRNCVKGLVASLISVKDTSATTALELVAGERLYNVVVDTEVTGKKLLERGELK 570
Query: 293 NVGRVNVIPLDKMQQYHSQCY--DKYRT------PENVPRLIDLIQVQDEKIRLAFYFAT 344
R +IPL+K+ ++C + R P+NV + L++ + E ++ A F
Sbjct: 571 R--RYTIIPLNKIS---ARCIAPETLRVAQNLVGPDNVHVALSLVEYKPE-LQKAMEFVF 624
Query: 345 RETLVAQDLNQAKRIGYSGGGY-RMVTLEGAIIEPSETLVAQDLNQAKRI 393
T V +++ AK++ + R VTL G + +P TL +QA I
Sbjct: 625 GTTFVCDNMDNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASI 674
Score = 130 (50.8 bits), Expect = 0.00013, P = 0.00013
Identities = 47/208 (22%), Positives = 95/208 (45%)
Query: 15 KLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERYVNMKNLGEHETKVQ 73
K ++ V+ +L+ E ELR L L+N ++ Q+E +L +TK+Q
Sbjct: 677 KFQELKDVQDELRIKENELRALEEELAGLKNTAEKYRQLKQQWEMKTEEADL--LQTKLQ 734
Query: 74 QME-QELTANLESIKKCTDEMESAKSELKTVEKKGKES-NVIGSKFRWSVFSAKTRFECD 131
Q + L+++KK +E E K +++K +E V+ +K + + A+ E
Sbjct: 735 QSSYHKQQEELDALKKTIEESEETLKNTKEIQRKAEEKYEVLENKMKNA--EAERERELK 792
Query: 132 IAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRA 191
A+ +L+ + +KK+ + + +E + L E K ++ A+ I +
Sbjct: 793 DAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHTSYKQQLEAVNEAIKSYES 852
Query: 192 RLADLTREEAKLLDQVEKLAREVSEKRE 219
++ + E AK + V K EV++++E
Sbjct: 853 QIEVMAAEVAKNKESVNKAQEEVTKQKE 880
Score = 94 (38.1 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 26/80 (32%), Positives = 42/80 (52%)
Query: 415 TLVAQDLNQAKRIGYSGGGY-RMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTS 473
T V +++ AK++ + R VTL G + +P GT+SGG + ++ T +
Sbjct: 627 TFVCDNMDNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASIL----TKFQELK 682
Query: 474 LVKD-LEVKEKRLASLETEL 492
V+D L +KE L +LE EL
Sbjct: 683 DVQDELRIKENELRALEEEL 702
Score = 81 (33.6 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 51/222 (22%), Positives = 101/222 (45%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYE-RYVNMKN- 64
K EER+ L Q V +++ L L A FL E+ R E+ + + + + ++
Sbjct: 209 KLKEERSSYL-EYQKVMREIEHLS-RLYIAYQFLLAEDTKVRSAEELKEMQDKVIKLQEE 266
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
L E++ K++ + E+ E ++K D+ E+ L+++E E+ + +K + S F
Sbjct: 267 LSENDKKIKALNHEI----EELEKRKDK-ETG-GILRSLEDALAEAQRVNTKSQ-SAFDL 319
Query: 125 KTR-FECDIAK-SELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
K + C+ +K ELE +++K LA E ++K+ L + + + A
Sbjct: 320 KKKNLACEESKRKELE---KNMVEDSKTLAAKEKEVKKITDGLHALQEASNKDAEALAAA 376
Query: 183 ESEI-AESRARLADLTREEAKLLDQVEKLAREVSEKR-ESMQ 222
+ A S ++ EA L Q+ ++S+ + E+ Q
Sbjct: 377 QQHFNAVSAGLSSNEDGAEATLAGQMMACKNDISKAQTEAKQ 418
Score = 53 (23.7 bits), Expect = 4.8e-06, Sum P(2) = 4.8e-06
Identities = 15/57 (26%), Positives = 34/57 (59%)
Query: 479 EVKEKRLASLETEL-RIL--SQQKME-VETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
EV E ++ + E E R L +Q+K++ +T+ + + ++K K+QE + ++++ K
Sbjct: 774 EVLENKMKNAEAERERELKDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELK 830
Score = 39 (18.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 10/45 (22%), Positives = 25/45 (55%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEY 520
++L+ +K+L +T+ S++ E + ++ EL+ K+E+
Sbjct: 789 RELKDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREH 833
>ASPGD|ASPL0000008486 [details] [associations]
symbol:sudA species:162425 "Emericella nidulans"
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0000785
"chromatin" evidence=ISS] [GO:0007067 "mitosis" evidence=IGI;IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0008278
"cohesin complex" evidence=IEA] [GO:0007064 "mitotic sister
chromatid cohesion" evidence=IEA] InterPro:IPR010935 Pfam:PF06470
SMART:SM00968 InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524
GO:GO:0005634 GO:GO:0005694 GO:GO:0051301 GO:GO:0007067
EMBL:AACD01000107 EMBL:BN001301 GO:GO:0051276 eggNOG:COG1196
SUPFAM:SSF75553 HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
OrthoDB:EOG4TB7KF EMBL:U40146 PIR:S65799 RefSeq:XP_663968.1
ProteinModelPortal:Q00737 STRING:Q00737 GeneID:2871258
KEGG:ani:AN6364.2 Uniprot:Q00737
Length = 1215
Score = 140 (54.3 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 78/374 (20%), Positives = 164/374 (43%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQY-ERYVNMKNLGEH 68
E + + L+ Q + KA E KAV ++ ++ + E+ + R+++ K+ E
Sbjct: 306 ELQAKSLSDNQAAAQESKARHDESLKAV-----QSAIEERQTELKELVPRFISAKD-AED 359
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFSAKTR 127
+ + E E K+ + KSE K ++ + K +N S + SV S +T+
Sbjct: 360 AARAKLTEAETARQRLYAKQGRNSRFKNKSERDKWLQAEIKNNNASISSVQ-SVLS-QTQ 417
Query: 128 FECDIAKSELEIFLSTQSKETKKLAD-----LEANLEKVQTTLTERKTLCEELTTRVPAM 182
+ + ++++ + L +++ ++ D +++ ++VQ ER L ++ V
Sbjct: 418 EDINDIENDIAL-LEPETERLRQQIDGRGDTIQSVEQQVQAAKDERDRLMDQ-RKYVDWP 475
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREV--SEKRESMQTSRSNNRLIDFVMQLKSE 240
+ A +L REEAKL + + EV +E+ S + +R I V ++K +
Sbjct: 476 RTSCATLTIH-RELWREEAKLDSILINASNEVDRAERNLSQMMDHNTSRGIAAVRRIKRQ 534
Query: 241 NRVSXXXXXXXXXXXXXQKYDIAVSTACG-ALNYIVTETVEAGEAVIAAVKRQNVGRVNV 299
+ + +Y AV G +L + V +T + V+ ++ + GRV
Sbjct: 535 HNLEGVYGTLAELFEVNDRYRTAVEVTAGQSLFHYVVDTDDTATKVLEILQHEKAGRVTF 594
Query: 300 IPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRI 359
+PL++++ ++ + + + +P +I+ +Q D AF +T++ +L A +
Sbjct: 595 MPLNRLR---TKPLNMPKASDTIP-MIEKLQY-DRAYEKAFQHVFGKTIICPNLQVASQY 649
Query: 360 GYSGGGYRMVTLEG 373
S G T EG
Sbjct: 650 ARSHG-VNATTPEG 662
Score = 52 (23.4 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 26/115 (22%), Positives = 49/115 (42%)
Query: 414 ETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNP-------IRGLMGRKA 466
+T++ +L A + S G T EG + G ++GG + ++ L +
Sbjct: 636 KTIICPNLQVASQYARSHG-VNATTPEGDRSDKRGALTGGFHDSRQSRLDAVKNLAKWRD 694
Query: 467 TVSTDTS----LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
T S + K+LE ++ + EL+ L QQ+ +V+ EL+ K+
Sbjct: 695 EYETKKSRGSEIRKELEELDQLITRAVGELQKLEQQRHQVQNSSGPLRQELRSKR 749
Score = 38 (18.4 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/67 (23%), Positives = 30/67 (44%)
Query: 456 NP-IRGLMGRKATVSTDTSL--VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNE 512
NP + L+ + A ++ + +K+ + ++KRL + +L Q E Q N E
Sbjct: 843 NPRLDQLLAQDADIADEDGQGNIKETQREQKRLTKVLDKLAQRLAQVDESMEQANSRVTE 902
Query: 513 LKYKKQE 519
L + E
Sbjct: 903 LTQRNAE 909
>WB|WBGene00001860 [details] [associations]
symbol:him-1 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0010165 "response to X-ray" evidence=IMP]
[GO:0009411 "response to UV" evidence=IMP] [GO:0008278 "cohesin
complex" evidence=ISS;IPI] [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IDA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0009411 GO:GO:0002119 GO:GO:0003677
GO:GO:0006281 GO:GO:0040011 GO:GO:0000790 GO:GO:0006310
GO:GO:0040035 GO:GO:0030261 GO:GO:0010165 GO:GO:0007064
GO:GO:0008278 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000195481
KO:K06636 OMA:NALVCET GeneTree:ENSGT00580000081569 EMBL:FO081198
RefSeq:NP_001040658.2 UniGene:Cel.5375 ProteinModelPortal:O01789
SMR:O01789 STRING:O01789 PaxDb:O01789 EnsemblMetazoa:F28B3.7a.1
EnsemblMetazoa:F28B3.7a.2 GeneID:172116 KEGG:cel:CELE_F28B3.7
UCSC:F28B3.7a.1 CTD:172116 WormBase:F28B3.7a InParanoid:O01789
NextBio:874073 ArrayExpress:O01789 Uniprot:O01789
Length = 1262
Score = 147 (56.8 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 77/374 (20%), Positives = 156/374 (41%)
Query: 10 EERTEKLTRVQLVETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+E + L VQ + L E +L K N L L+ V +H ++ + K L
Sbjct: 280 QEHRKALREVQKMTRKLDQKETDLAEKQQNMLTLKVSVAHEHKKLE-----IAKKMLAAA 334
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESA-KSELKTVEKKGKESNVIGSKFR-WSVFSAKT 126
E+K + +L A+L+ KK ++ ++A ++E++ + ++G E N+ + R + +
Sbjct: 335 ESKAENNSTQL-ADLKKSKKELEKKKAAYEAEIQDMMQRG-ELNLSDEQVREYGQLKDQA 392
Query: 127 RFECDIAKSEL----EIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
+ E + + EL ++F +S +L + + E+V+ + + + ++ T +
Sbjct: 393 QRESAMVQRELLMAEQVFEGDKSSLNHELRRQKEHQERVKAKEGDVRRIETQIATLAQRI 452
Query: 183 ESEIAESRARLADLTR-EEAKLLD---------QVEKLAREVSEKRESMQTSRSNNRLID 232
+ E++ ADL + E ++D ++ + R++SE N R +
Sbjct: 453 KETEEETKILKADLKKIENDVVIDKSAAAEYNKELVAVVRQLSEASGDSAEGERNQRRTE 512
Query: 233 FVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKR 291
+ LK S ++++IA + +N IV +T E I +K
Sbjct: 513 ALEGLKKNFPESVYGRLVDLCQPSHKRFNIATTKILQKHMNSIVCDTEETAAKAIVYLKD 572
Query: 292 QNVGRVNVIPLDKMQQYH-SQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVA 350
+P D + ++ + + P V + D+I Q + R A F LV
Sbjct: 573 HRYPPETFLPNDALVVNPLNEKLREIKKPAGVKLVFDVINPQHQAARKALQFVCGNALVC 632
Query: 351 QDLNQAKRIGYSGG 364
+ AK++ Y GG
Sbjct: 633 ESQEDAKQLAYGGG 646
Score = 142 (55.0 bits), Expect = 5.5e-05, Sum P(2) = 5.5e-05
Identities = 74/345 (21%), Positives = 142/345 (41%)
Query: 63 KNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVF 122
K +E ++Q M Q NL +DE +LK ++ +ES ++ + +
Sbjct: 357 KKKAAYEAEIQDMMQRGELNL------SDEQVREYGQLK--DQAQRESAMVQRE----LL 404
Query: 123 SAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQT---TLTERKTLCEELTTRV 179
A+ FE D KS L L Q + +++ E ++ +++T TL +R EE T +
Sbjct: 405 MAEQVFEGD--KSSLNHELRRQKEHQERVKAKEGDVRRIETQIATLAQRIKETEEETKIL 462
Query: 180 PA----MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVM 235
A +E+++ ++ A+ +E + + R++SE N R + +
Sbjct: 463 KADLKKIENDVVIDKSAAAEYNKE-------LVAVVRQLSEASGDSAEGERNQRRTEALE 515
Query: 236 QLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNV 294
LK S ++++IA + +N IV +T E I +K
Sbjct: 516 GLKKNFPESVYGRLVDLCQPSHKRFNIATTKILQKHMNSIVCDTEETAAKAIVYLKDHRY 575
Query: 295 GRVNVIPLDKMQQYH-SQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDL 353
+P D + ++ + + P V + D+I Q + R A F LV +
Sbjct: 576 PPETFLPNDALVVNPLNEKLREIKKPAGVKLVFDVINPQHQAARKALQFVCGNALVCESQ 635
Query: 354 NQAKRIGYSGGG----YRMVTLEGAIIEPSETLV--AQDLNQAKR 392
AK++ Y GG ++ V+++G + + S + + DL Q +
Sbjct: 636 EDAKQLAYGGGELKDRFKAVSMDGTLFQQSGVMSGGSADLRQKSK 680
Score = 44 (20.5 bits), Expect = 6.3e-06, Sum P(2) = 6.3e-06
Identities = 25/149 (16%), Positives = 59/149 (39%)
Query: 382 LVAQDLNQAKRIGYSGGG----YRMVTLEGAIIEPSETLV--AQDLNQAKRIGYSGGGYR 435
LV + AK++ Y GG ++ V+++G + + S + + DL Q +
Sbjct: 630 LVCESQEDAKQLAYGGGELKDRFKAVSMDGTLFQQSGVMSGGSADLRQKSK--------- 680
Query: 436 MVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEVKEKRLASLETELRIL 495
+ +++ + I L + S+ + E+RLA ++ +L+ +
Sbjct: 681 --KWDEKVVKQLREKRNQLNEKIADLQKHRRRELEVESVRSKINGNEQRLAMMKRDLKNM 738
Query: 496 SQQKME-VETQLNCTGNELKYKKQEYDTC 523
+ ++E ++ +L E+ C
Sbjct: 739 REMQLERLQNELEGMTAEMNMLPPRISNC 767
Score = 40 (19.1 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 17/58 (29%), Positives = 27/58 (46%)
Query: 465 KATVSTDTSLVKDLEVKEKRLA--------SLETELRILSQQKMEVETQLNCTGNELK 514
K VS KD++ KEK A S+E + +L ++K + +L NE+K
Sbjct: 853 KEKVSQIDRQYKDMKKKEKTAAAALKEHTESMEQDKEVLEEKKA-LSHKLETEWNEVK 909
>FB|FBgn0015615 [details] [associations]
symbol:Cap "Chromosome-associated protein" species:7227
"Drosophila melanogaster" [GO:0008278 "cohesin complex"
evidence=ISS;NAS] [GO:0007062 "sister chromatid cohesion"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0046331 "lateral inhibition"
evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] [GO:0001737 "establishment of imaginal
disc-derived wing hair orientation" evidence=IMP]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0022008 GO:GO:0046331
GO:GO:0051276 GO:GO:0001737 GO:GO:0008278 eggNOG:COG1196
SUPFAM:SSF75553 HSSP:Q9X0R4 EMBL:U30492 PIR:S70553
ProteinModelPortal:Q24098 SMR:Q24098 STRING:Q24098 PaxDb:Q24098
PRIDE:Q24098 FlyBase:FBgn0015615 InParanoid:Q24098
OrthoDB:EOG4KKWHV ArrayExpress:Q24098 Bgee:Q24098 Uniprot:Q24098
Length = 1231
Score = 110 (43.8 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 68/399 (17%), Positives = 166/399 (41%)
Query: 12 RTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV-NMK-NLGEHE 69
++ K R L+ + L + + + ++L + VQ + + ++ + N+K + E E
Sbjct: 313 QSTKEERSVLMTEQQQLLREKTKLDLTIVDLNDEVQGDNKSKERADQELKNLKVTIAERE 372
Query: 70 TKVQQMEQELTANLESIKKCTDEM---ESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
++ ++ + A + C+ E+ E + EL + +G + + + +W K+
Sbjct: 373 KELDDVKPKYEAMKRKEEDCSRELQLKEQKRKELYAKQGRGSQFSSREDRDKWITNELKS 432
Query: 127 RFECDIAK-SELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESE 185
+ K + + K+ DL +E+ + L + + +E + ++
Sbjct: 433 ISKQTRDKIAHHAKLVEDLKKDATSEKDLGQKIEEHSSELEQLRLQIDEHNKKYYELKKT 492
Query: 186 IAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSR---------SNNRLID-FVM 235
+ ++ +L R+E ++ Q++ E+S +++++ S +++D FV
Sbjct: 493 KDQHQSMRNELWRKETQMTQQLQTHKEELSRADQALRSMAGKPILNGCDSVRKVLDSFVE 552
Query: 236 QLKSENRVSXXXXXXXXXXXXXQK--YDIAVSTACGALNYIVTETVEAGEAVIAAVKRQN 293
+ ++ K Y TA L + + E+ G ++ + +
Sbjct: 553 RGGQSAEIARAYYGPVIENFSCDKTIYTAVEVTAANRLFHHIVESEYEGTQILKEMNKLK 612
Query: 294 V-GRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQD 352
+ G V +PL+++Q + +D P+++P + L DE+ A + +TL+ ++
Sbjct: 613 LPGEVTFMPLNRLQV---KIHDYPDDPDSIPMISKL--KYDEQHDKALRYIFGKTLICRN 667
Query: 353 LNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQAK 391
L +A + S G VTL+G + +L N ++
Sbjct: 668 LERATELAKSTG-LDCVTLDGDQVSSKGSLTGGYFNTSR 705
Score = 82 (33.9 bits), Expect = 6.8e-06, Sum P(2) = 6.8e-06
Identities = 27/106 (25%), Positives = 51/106 (48%)
Query: 414 ETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTS 473
+TL+ ++L +A + S G VTL+G + G+++GG N R + + + TS
Sbjct: 661 KTLICRNLERATELAKSTG-LDCVTLDGDQVSSKGSLTGGYFNTSRSRLEMQKKRTEYTS 719
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+ + E K+L+ L EL+ + +++ T E K K +
Sbjct: 720 QIAEFE---KKLSKLRNELKSTENNINSIVSEMQKT--ETKQGKSK 760
>UNIPROTKB|G4N0Y1 [details] [associations]
symbol:MGG_09571 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] EMBL:CM001233 RefSeq:XP_003712166.1
EnsemblFungi:MGG_09571T0 GeneID:2680546 KEGG:mgr:MGG_09571
Uniprot:G4N0Y1
Length = 709
Score = 138 (53.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 46/228 (20%), Positives = 108/228 (47%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLELEN-CVQRKHNEIYQYERYVNMKNLGEH 68
+E EK+ ++ + +L A +L+ V + +N ++++ +++ + E
Sbjct: 126 KETLEKIDALEKAKAELNAQVEKLKSEVADVSSKNDSLRQEQSKLLEETNSAKDTLKAEL 185
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSEL----KTVEKK----GKESNVIGSKFRWS 120
+ K+ + +L A + + +E + K++L KT++ + K++ SK
Sbjct: 186 DAKIVALTSDLDAAKADLSRANEEAATTKTKLEEQVKTLQAELDATKKDAQAAASKGTEE 245
Query: 121 VFSAKTRFECDIAKSELEIFLSTQSKETKKL--ADLEANLEKVQTTLTERKTLCEELTTR 178
S T IAK E ++ + +S ET + A L+ + K++ L K+ ++LT
Sbjct: 246 AKSEVTSLNTKIAKLEEDLEAANKSTETAQAEAATLKTKISKLEEDLAAAKSQSDKLTQE 305
Query: 179 VPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRS 226
A + + ++ A++ T+E LL +++ V+EK+ S++ +++
Sbjct: 306 AEAQKKSLDDANAQIQAKTKETEDLLAKLKAAEASVAEKQASLEKTQA 353
Score = 47 (21.6 bits), Expect = 7.0e-06, Sum P(2) = 7.0e-06
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 464 RKATVSTDTSLVK---DLEVKEKRLASLETELRILSQQKMEVET---QLNCTGNELKYKK 517
+KA + L K D + KR+A E E + LS + E+ +L EL +K
Sbjct: 643 KKAAEDAQSKLKKAEEDTKALNKRVADAEKESKELSTKATAAESRTKELEAKVKELSEQK 702
Query: 518 QE 519
+E
Sbjct: 703 KE 704
Score = 38 (18.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 10/43 (23%), Positives = 22/43 (51%)
Query: 465 KATVSTDTSLVKDLE--VKEKRLASLETELRILSQQKMEVETQ 505
K V + + D + V+ ++ A ET+ + +++K ET+
Sbjct: 408 KKAVEVEKAAAADAKKAVEAEKTAHAETKTALEAEKKAHAETK 450
Score = 38 (18.4 bits), Expect = 5.8e-05, Sum P(2) = 5.8e-05
Identities = 13/56 (23%), Positives = 24/56 (42%)
Query: 464 RKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+KA T T+L + + SL++E + +ETQ + + K + E
Sbjct: 443 KKAHAETKTALETEKIAAAEAKKSLDSEKASKADANSALETQKSAVADAQKAVEAE 498
>CGD|CAL0004031 [details] [associations]
symbol:SMC3 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0051177 "meiotic sister chromatid
cohesion" evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0030437 "ascospore formation" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IEA]
[GO:0007064 "mitotic sister chromatid cohesion" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
InterPro:IPR010935 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
EMBL:AACQ01000026 SUPFAM:SSF75553 KO:K06669 RefSeq:XP_720093.1
ProteinModelPortal:Q5AEZ0 STRING:Q5AEZ0 GeneID:3638190
KEGG:cal:CaO19.7895 CGD:CAL0062457 Uniprot:Q5AEZ0
Length = 1240
Score = 128 (50.1 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 84/375 (22%), Positives = 161/375 (42%)
Query: 14 EKLTRVQLVETDLK----ALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE 69
++L +V + E ++K +L EL K N + + + +EI Q+++ ++
Sbjct: 295 DQLLKV-IAEKEIKLRELSLNNELSKEQN-IHINEQIGILQSEINQHKQEISRYK--PEL 350
Query: 70 TKVQQMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKES--NVIGSKFRWSVFSA-- 124
K+QQ E L L I + + +S K V KK ++S N SK + +
Sbjct: 351 NKLQQQESSLKQQLSEISSKQRALYAKQSRFSKFVNKKDRDSWLNTEISKLKRQITDKDQ 410
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+ R + K+ E L S+ KKL D N E+ TL KT + ++ +
Sbjct: 411 EMRHISNEVKTR-ESSLEALSESIKKLND-SLNDEEHIKTLANLKTTINDSKQQI----T 464
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM-QT-SRSNNRLIDFVMQLKSENR 242
++ + R ++ L R+E +L + L +++ + QT R+ + I V Q+
Sbjct: 465 QLVDQR-KI--LWRDEIRLKSVHDSLTNDLTNATNIVNQTMDRAQAQGIAAVKQIAQRLN 521
Query: 243 VSXXXXXXXXXXXXXQ-KYDIAVSTACG-ALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
+S KY A G +L +IV +T ++ + R GRV +
Sbjct: 522 LSDRVYGTVAELFNVNDKYKTAAEVIAGNSLFHIVVDTDVTAATIMEELIRNKAGRVTFV 581
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIG 360
PL+++ + D + + +P LI ++ +E++ A +TLV +L++ +
Sbjct: 582 PLNRIDNIEVEYPDSHEN-QCLP-LIKKLKY-NEQVYKAINQIFGKTLVVSELSKGGELS 638
Query: 361 YSGGGYRM--VTLEG 373
Y++ +TL+G
Sbjct: 639 RK---YKLSCITLDG 650
Score = 63 (27.2 bits), Expect = 7.4e-06, Sum P(2) = 7.4e-06
Identities = 27/119 (22%), Positives = 52/119 (43%)
Query: 414 ETLVAQDLNQAKRIGYSGGGYRM--VTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTD 471
+TLV +L++ + Y++ +TL+G ++ G +SGG + R +
Sbjct: 624 KTLVVSELSKGGELSRK---YKLSCITLDGDRVDTRGVLSGGYRDYKNS---RIDALKIQ 677
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSP 530
T ++LE ++ L + E+ +QLN NEL+ ++ D + K P
Sbjct: 678 TRKKQELEKTDRELIKVTKEIE-------STNSQLNKLNNELQLNVRDLDRLSVS-KEP 728
>ZFIN|ZDB-GENE-030616-162 [details] [associations]
symbol:myh10 "myosin, heavy chain 10, non-muscle"
species:7955 "Danio rerio" [GO:0016459 "myosin complex"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051015 "actin filament
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 ZFIN:ZDB-GENE-030616-162 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00650000092896
SUPFAM:SSF50084 EMBL:AL954384 EMBL:FP017252 IPI:IPI00865727
Ensembl:ENSDART00000046359 Ensembl:ENSDART00000151114
Uniprot:F1R3G4
Length = 1992
Score = 146 (56.5 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 57/234 (24%), Positives = 113/234 (48%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHN-EIYQYERYVNMKNL 65
K + EKL R L E +L+AL+ EL ++ + ++ K E+ + ++ ++ +
Sbjct: 1150 KAARNKAEKLKR-DLSE-ELEALKTELEDTLDTTAAQQELRSKREQEVAELKKAIDDETR 1207
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELK----TVEKKGKE-SNVIGSKFRWS 120
HE+++Q+M Q LE I + ++ + K L+ T+E KE +N + S +
Sbjct: 1208 N-HESQIQEMRQRHGTALEEISEQLEQAKRVKGNLEKNKQTLESDNKELTNEVKSLQQAK 1266
Query: 121 VFSAKTRFECDIAKSELEIFLSTQSKETKKLAD----LEANLEKVQTTLTERKTLCEELT 176
S R + + E+ S K +LAD ++ L+ V L + + +LT
Sbjct: 1267 SESEHKRKKLEAQLQEVMARFSEGEKVKGELADRTHKIQTELDNVSCLLEDAEKKGIKLT 1326
Query: 177 TRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVS---EKRESMQTSRSN 227
V ++ES++ +++ L + TR++ L ++ +L E + E++E + SR N
Sbjct: 1327 KDVSSLESQLQDTQELLQEETRQKLNLSSRIRQLEEEKNNLLEQQEEEEESRKN 1380
Score = 48 (22.0 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 483 KRLASLETELRILSQQKMEVETQLNCTGNELK 514
K + LE R L QQ E+ TQL +EL+
Sbjct: 1544 KNVHELEKSKRTLEQQVEEMRTQLEELEDELQ 1575
Score = 48 (22.0 bits), Expect = 8.6e-06, Sum P(2) = 8.6e-06
Identities = 18/68 (26%), Positives = 33/68 (48%)
Query: 461 LMGRKATVSTDTSLVKDLE-VKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
L+ K + D ++ LE VK K +E + L ++ + + +L T N L+ QE
Sbjct: 1392 LVETKKKLEDDVGALEGLEEVKRKLQKDMEVTSQKLEEKAIAFD-KLEKTKNRLQ---QE 1447
Query: 520 YDTCLIDV 527
D ++D+
Sbjct: 1448 LDDLMVDL 1455
Score = 44 (20.5 bits), Expect = 2.2e-05, Sum P(2) = 2.2e-05
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCT 509
+S+ + K++ EK +LE ++ + Q E+E +L T
Sbjct: 1536 ISSKDDVGKNVHELEKSKRTLEQQVEEMRTQLEELEDELQAT 1577
Score = 41 (19.5 bits), Expect = 4.5e-05, Sum P(2) = 4.5e-05
Identities = 12/33 (36%), Positives = 17/33 (51%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQ 497
+A S D + E EK+L SLE E+ L +
Sbjct: 1682 EARTSRDEIFTQSKE-NEKKLKSLEAEILQLQE 1713
Score = 40 (19.1 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 487 SLETEL---RILSQQKMEVETQLNCTGNELKYKKQEYD 521
+L TEL R +Q+ QL +LK K QE +
Sbjct: 1787 TLNTELAGERSAAQKSENARQQLERQNKDLKSKLQELE 1824
Score = 40 (19.1 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 11/45 (24%), Positives = 23/45 (51%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
L KD+EV ++L L + K ++ +L+ +L +++Q
Sbjct: 1416 LQKDMEVTSQKLEEKAIAFDKLEKTKNRLQQELDDLMVDLDHQRQ 1460
Score = 38 (18.4 bits), Expect = 9.1e-05, Sum P(2) = 9.1e-05
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 467 TVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEV 502
+ S +L+ + E R+A LE EL Q ME+
Sbjct: 1739 SASGKAALLDEKRRLEARIAQLEEELEE-EQSNMEL 1773
Score = 37 (18.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 9/39 (23%), Positives = 18/39 (46%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNE 512
+V +LE K+K+ + E + +S + E + E
Sbjct: 1461 IVSNLEKKQKKFDQMLAEEKTISARYAEERDRAEAEARE 1499
>ZFIN|ZDB-GENE-050531-1 [details] [associations]
symbol:myh11a "myosin, heavy polypeptide 11, smooth
muscle a" species:7955 "Danio rerio" [GO:0016459 "myosin complex"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030860 "regulation of
polarized epithelial cell differentiation" evidence=IMP]
[GO:0048546 "digestive tract morphogenesis" evidence=IMP]
[GO:0048565 "digestive tract development" evidence=IMP] [GO:0003779
"actin binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 ZFIN:ZDB-GENE-050531-1 GO:GO:0005524 GO:GO:0003774
GO:GO:0048546 GO:GO:0016459 HOVERGEN:HBG004704 KO:K10352
EMBL:DQ022376 IPI:IPI00513242 RefSeq:NP_001019619.1
UniGene:Dr.78058 ProteinModelPortal:Q4U0S2 SMR:Q4U0S2 STRING:Q4U0S2
GeneID:554168 KEGG:dre:554168 CTD:554168 InParanoid:Q4U0S2
NextBio:20880720 GO:GO:0030860 Uniprot:Q4U0S2
Length = 1974
Score = 143 (55.4 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 77/361 (21%), Positives = 164/361 (45%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNFLEL----ENCVQRKHNEIYQYERYVNMK 63
E + E++ T+++ +E +L+A E +LR VN L E +Q + + + +R + +K
Sbjct: 1536 EAQVEEMKTQLEELEDELQAAEDAKLRLEVNMQALKAQFERDLQGRDEQGEEKKRQL-VK 1594
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E ET+++ ++ TA S KK +++ + +++T KG++ + + R
Sbjct: 1595 QVRELETELEDERKQRTALAASKKKLEGDLKDLEGQIET-SNKGRDEAI--KQLRKLQAQ 1651
Query: 124 AKT-RFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
K + E D A + E LS+ + +K LEA L ++Q L + +++ +
Sbjct: 1652 MKDFQRELDDAHAAREEVLSSAKENERKAKTLEAELLQLQEDLAAAERAKKQVEAERDEL 1711
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENR 242
E+A + + + L+ E+ +L ++++L E+ E++ +M+ N+RL KS +
Sbjct: 1712 ADELASNASGKSALSDEKRRLEAKIQQLEEELEEEQGNMEML--NDRL------RKSAQQ 1763
Query: 243 VSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPL 302
V QK + A N + ++ E + + + ++ +
Sbjct: 1764 VDQLTNELQAERTTSQKNESA-RQLMERQNKELKAKLQEMENQVKSKFKSSISALEAKVA 1822
Query: 303 DKMQQYHSQCYDKYRTPENV----PRLIDLI-QVQDEKIRLAFYFATRETLVAQDLNQAK 357
+Q + DK T + V +L +++ QV+DE+ + Y + A+ + Q K
Sbjct: 1823 QLEEQLEQESRDKQNTAKAVRQKDKKLKEMMTQVEDERKQAEQYKDQADKATAR-VKQLK 1881
Query: 358 R 358
R
Sbjct: 1882 R 1882
>ZFIN|ZDB-GENE-110401-4 [details] [associations]
symbol:si:ch211-24n20.3 "si:ch211-24n20.3"
species:7955 "Danio rerio" [GO:0016459 "myosin complex"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-110401-4 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00680000099788 EMBL:CU929259 EMBL:CR450736
IPI:IPI00897078 Ensembl:ENSDART00000135233 Uniprot:E9QHL6
Length = 1942
Score = 141 (54.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 71/361 (19%), Positives = 157/361 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ AL+ + K + L+ Q+ +++ E
Sbjct: 963 LELTLAKVEKEKHATENKVKNLTEEMAALDEIIAKLTKEKKALQEAHQQTLDDLQSEEDK 1022
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1023 VN--TLTKAKAKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLTQESVMDLENDKQ 1080
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE S +E + ++ KKL +L+A +E+++ L + ++
Sbjct: 1081 QLEERLKKKDFEISQLSSRIEDEQAMAAQLQKKLKELQARIEELEEELEAERAARAKVEK 1140
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ + E+ E RL + A ++ +K E + R ++ + + ++
Sbjct: 1141 QRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATASTLRK 1200
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + VS QK + S L + + V E ++ A + N+ ++
Sbjct: 1201 KHADSVSDLGEQIDNLQRVKQKLEKEKSE----LRLELDDVVSNMEQIVKA--KANLEKM 1254
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M +Y ++ + R+ + + ++Q E L+ +++LV+Q L + K
Sbjct: 1255 CRTLEDQMSEYRTKYEEAQRSINDFT--MQKAKLQTENGELSRQLEEKDSLVSQ-LTRGK 1311
Query: 358 R 358
+
Sbjct: 1312 Q 1312
Score = 52 (23.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 21/106 (19%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + L E
Sbjct: 1803 LDEAEQIAMKGGKKQVQKLESRVRELESEVEMEQRKASESVKGVRKYERRIKELTYQTEE 1862
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K LA L+ +L++ S ++ E + N K++K +++
Sbjct: 1863 DRKNLARLQDLVDKLQLKVKSYKRAAEEAEEQANSNLGKFRKLQHE 1908
Score = 44 (20.5 bits), Expect = 7.1e-05, Sum P(2) = 7.1e-05
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
L + + K + LE + L Q+K E++T L L++++
Sbjct: 1518 LTEQIGESGKNIHELEKIRKQLEQEKAEIQTALEEAEGSLEHEE 1561
Score = 40 (19.1 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+LE +K SL TEL L E L E K ++E
Sbjct: 1472 ELESSQKEARSLSTELFKLKNSYEESLDHLESMKRENKNLQEE 1514
Score = 37 (18.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 353 LNQAKRIGYSGGGYRMVTLEGAIIE-PSETLVAQ 385
L++A++I GG ++ LE + E SE + Q
Sbjct: 1803 LDEAEQIAMKGGKKQVQKLESRVRELESEVEMEQ 1836
Score = 37 (18.1 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 11/34 (32%), Positives = 19/34 (55%)
Query: 387 LNQAKRIGYSGGGYRMVTLEGAIIE-PSETLVAQ 419
L++A++I GG ++ LE + E SE + Q
Sbjct: 1803 LDEAEQIAMKGGKKQVQKLESRVRELESEVEMEQ 1836
>ZFIN|ZDB-GENE-041111-270 [details] [associations]
symbol:eea1 "early endosome antigen 1" species:7955
"Danio rerio" [GO:0005622 "intracellular" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS50157 SMART:SM00064 SMART:SM00355
ZFIN:ZDB-GENE-041111-270 GO:GO:0046872 GO:GO:0008270 GO:GO:0005622
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 KO:K12478
GeneTree:ENSGT00700000104373 EMBL:CR854977 EMBL:CR753897
EMBL:CT573156 IPI:IPI00961262 RefSeq:XP_003200485.1
Ensembl:ENSDART00000091349 GeneID:562943 KEGG:dre:562943
NextBio:20884663 Bgee:F1QS51 Uniprot:F1QS51
Length = 1398
Score = 135 (52.6 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 61/247 (24%), Positives = 121/247 (48%)
Query: 13 TEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVN---MKNLGEHE 69
TE +++ E + AL+ L K L E Q++ E+ + + ++ K GE E
Sbjct: 783 TETRQKLEKAEQERGALQANLDK----LSQEG--QKQQAELDKKVQGLSSDLQKTQGEKE 836
Query: 70 TKVQQM---EQELTANLESIKKCTDEMESAKSELK-TVEKKGKESNVIGSKFRWSVFSAK 125
T V+++ ++ L+ +++K+ +++ K K T+E+K K + + + + S
Sbjct: 837 TLVKEVATVKEALSKASKALKESQTQLDKEKKGSKATLEEKEKVFQKVQQELQKN--SEA 894
Query: 126 TRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKT----LCEELTTR--- 178
T E K LE + + +L L A L++ Q TL E++ L EL TR
Sbjct: 895 TSKELSNVKGLLEKSIEAEKSLQSQLTALNAQLKQCQDTLKEKEKSEQQLQAELKTRQGS 954
Query: 179 ----VPAMESEIAESRARLADLTREEAKLLDQVEKLAREVS-EKRESMQTSRSNNRLIDF 233
V ++++++E +A LA T EEAK +Q+ L++++S EK + ++++ +
Sbjct: 955 FSQEVKKLKTQVSELQASLAKKTEEEAKQKEQITALSKDLSSEKNRCAELQKTSDGTKES 1014
Query: 234 VMQLKSE 240
+ L+S+
Sbjct: 1015 LTALQSD 1021
Score = 55 (24.4 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
Identities = 12/50 (24%), Positives = 27/50 (54%)
Query: 479 EVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
E EK L L+ ++L QQK+E++ ++ ++ +++E+ +K
Sbjct: 1139 EKNEKELKDLQAAKQLLIQQKVEMQGKVEAAQASVEKEQREHQKTRDSIK 1188
Score = 49 (22.3 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 12/48 (25%), Positives = 26/48 (54%)
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK-YKKQ 518
T+L D KE L+++ +L++ ++ + + +L N+L Y+ Q
Sbjct: 1016 TALQSDYYGKESELSAVRQDLKVCEEKLVLAQEELVTNRNQLSAYETQ 1063
Score = 43 (20.2 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 16/57 (28%), Positives = 25/57 (43%)
Query: 451 SGGGSNPIRGLMGRKATVSTDTSLVK-DLEVKEKRLASLETELRILSQQKMEVETQL 506
S G + L ++ S V+ DL+V E++L + EL Q ETQ+
Sbjct: 1008 SDGTKESLTALQSDYYGKESELSAVRQDLKVCEEKLVLAQEELVTNRNQLSAYETQI 1064
Score = 38 (18.4 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 15/67 (22%), Positives = 29/67 (43%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
K V T L K E++L + + L + + +E N +LK ++ + L
Sbjct: 1086 KQQVETLQKLQKQQGQTEEQLKKEKAQCEELRESQSALEKDKNKLSADLKTLAEKNEKEL 1145
Query: 525 IDVKSPK 531
D+++ K
Sbjct: 1146 KDLQAAK 1152
>WB|WBGene00012437 [details] [associations]
symbol:hum-9 species:6239 "Caenorhabditis elegans"
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
InterPro:IPR001609 Pfam:PF00063 PRINTS:PR00193 SMART:SM00242
GO:GO:0005524 GO:GO:0003774 eggNOG:COG5022 GO:GO:0016459
HSSP:P08799 EMBL:AL032632 PIR:T26467 RefSeq:NP_501620.2
ProteinModelPortal:Q9XWR0 SMR:Q9XWR0 IntAct:Q9XWR0 PaxDb:Q9XWR0
EnsemblMetazoa:Y11D7A.14 GeneID:177750 KEGG:cel:CELE_Y11D7A.14
UCSC:Y11D7A.14 CTD:177750 WormBase:Y11D7A.14
GeneTree:ENSGT00650000093473 HOGENOM:HOG000020502 InParanoid:Q9XWR0
OMA:TKCEVPS NextBio:898224 Uniprot:Q9XWR0
Length = 1464
Score = 117 (46.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 47/210 (22%), Positives = 101/210 (48%)
Query: 11 ERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKN-LGEHE 69
E EK R +L+E + + + + E+ N ++RK+NE Q+++ + M + L E+E
Sbjct: 880 EEVEKQGREKLLEKE-REFRKTMEEMEQNEEIFNVLERKYNE--QHKKVMKMNDVLREYE 936
Query: 70 TKVQQMEQELTANLESIKKCTDEMESAK-SELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
K++Q+ E T +LE+ + E ++ + S +EK+ E + + + + +
Sbjct: 937 RKIEQLNMEKT-DLENENQKLRETQNRQDSHYSNLEKEVMEKSSL-------IDELQNQI 988
Query: 129 ECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAE 188
+ ++ E L+ ET L D +A + T+ + + L EL ++ ++
Sbjct: 989 Q-KLSDENNEQRLTIAKLETA-LEDEKARFARQNNTIGDMQKLISELNEKIARFDNIALN 1046
Query: 189 SRARLADLTREEAKLLDQVEKLAREVSEKR 218
R + RE+ KL +++ A+E+ +K+
Sbjct: 1047 ERNSTRKIEREKEKLNEELTT-AKEIIQKQ 1075
Score = 108 (43.1 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 57/235 (24%), Positives = 109/235 (46%)
Query: 9 DEERTEKLTRVQL-VETDLKALEPELRKAVNF-LELENCVQRKHNEIYQYERYVNMKNLG 66
D+ER E+L +L +E +++ +E + +A+ L+L + R+ +E + + K L
Sbjct: 826 DKERIEELENEKLKLEEEIQEMEIKNEEALKENLKLSMLLDREKSEKVKVQ-----KELE 880
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
E E +Q ++L +K +EME + +E+K E + K + +
Sbjct: 881 EVE---KQGREKLLEKEREFRKTMEEMEQNEEIFNVLERKYNEQHKKVMKMNDVLREYER 937
Query: 127 RFE-CDIAKSELEIFLSTQSKETKKLADLE-ANLEKVQTTLTERKTLCEELTTRVPAMES 184
+ E ++ K++LE + + +ET+ D +NLEK + E+ +L +EL ++ +
Sbjct: 938 KIEQLNMEKTDLENE-NQKLRETQNRQDSHYSNLEK---EVMEKSSLIDELQNQIQKLSD 993
Query: 185 EIAESRARLADLTR----EEAKLLDQ------VEKLAREVSEKRESMQTSRSNNR 229
E E R +A L E+A+ Q ++KL E++EK N R
Sbjct: 994 ENNEQRLTIAKLETALEDEKARFARQNNTIGDMQKLISELNEKIARFDNIALNER 1048
Score = 74 (31.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 465 KATVSTDTSLVK-DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTC 523
KA ++TD LVK +L+V + +L+++E+E L + QL T +L ++ D
Sbjct: 1250 KAAINTDLQLVKRELDVYKSQLSAVESEKESLQTANRKQSNQLQETTRQLNSAQKNADNL 1309
Query: 524 LIDVK 528
+ +K
Sbjct: 1310 ALRLK 1314
>DICTYBASE|DDB_G0291752 [details] [associations]
symbol:smc1 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007062 "sister chromatid cohesion"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=ISS] [GO:0042770
"signal transduction in response to DNA damage" evidence=ISS]
[GO:0008280 "cohesin core heterodimer" evidence=ISS] [GO:0007064
"mitotic sister chromatid cohesion" evidence=ISS] [GO:0007052
"mitotic spindle organization" evidence=ISS] [GO:0003777
"microtubule motor activity" evidence=ISS] [GO:0003682 "chromatin
binding" evidence=ISS] [GO:0000075 "cell cycle checkpoint"
evidence=ISS] [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 dictyBase:DDB_G0291752 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GenomeReviews:CM000155_GR GO:GO:0007052
GO:GO:0006281 GO:GO:0003682 EMBL:AAFI02000182 GO:GO:0042770
GO:GO:0006310 GO:GO:0046982 GO:GO:0030261 GO:GO:0003777
GO:GO:0000075 GO:GO:0007064 eggNOG:COG1196 SUPFAM:SSF75553
GO:GO:0008280 KO:K06636 OMA:NALVCET RefSeq:XP_629977.1
ProteinModelPortal:Q54E85 STRING:Q54E85 EnsemblProtists:DDB0219931
GeneID:8628307 KEGG:ddi:DDB_G0291752 InParanoid:Q54E85
Uniprot:Q54E85
Length = 1373
Score = 146 (56.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 80/379 (21%), Positives = 162/379 (42%)
Query: 23 ETDLKALEPELRKAVNFL-ELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQM--EQEL 79
E ++K + +++K L + EN ++ EI Q +N E +++ + E+E+
Sbjct: 306 EEEIKYISEKIKKTKLILSKAENSRSKQIQEIDQLRNELN-----EFTEQLENLDDEKEV 360
Query: 80 TANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELEI 139
SIK ++E ++LK + GKE++ G K ++ S + + E D ++
Sbjct: 361 AETGLSIKMDHQQIEEY-NQLKL--QSGKETS--GLKIKYDQLSREHKIEQD---QHQQL 412
Query: 140 FLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLTRE 199
+ ET K E+ EK Q ++ ++L ++ E E+ + R + +
Sbjct: 413 TYRLEEFETMKKKFQESK-EKFQNQKDIEQSNFQDLEQKLKESEKELVQCTTRFNETQQR 471
Query: 200 EAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQK 259
+ L + +E++ +S+ + S+ + + V LKS +K
Sbjct: 472 QQNLNNDLERIQYSLSDLKSLKSESQRDRQFNQTVETLKSIFP-GVKGKLMDLCEPSQRK 530
Query: 260 YDIAVSTACGAL-NYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDKMQQYH--SQCYDKY 316
Y A++ G L + I+ +T E + +K Q +G I LD++Q +Q +
Sbjct: 531 YATALTLTMGKLMDAIIVDTEETLIGCVRYLKEQLLGVATFISLDRLQMVKPINQQLRQI 590
Query: 317 RTP---ENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSGGG-YRMVTLE 372
L D +++Q + I A +A T+V + L +AK + + G +++T++
Sbjct: 591 SGGGGGSTAKLLFDCLKIQ-KGIEDAVLYALGNTVVCESLAEAKLLAFGGKDRVKVITIQ 649
Query: 373 GAIIEPSETLVAQDLNQAK 391
G I S + L+ K
Sbjct: 650 GIRITKSGLMSGGGLSSIK 668
Score = 96 (38.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 30/122 (24%), Positives = 66/122 (54%)
Query: 405 LEGAIIEP-SETLVAQDLNQAKRIGYSGGG-YRMVTLEGAIIEPSGTMSGGGSNPIRGLM 462
+E A++ T+V + L +AK + + G +++T++G I SG MSGGG + I+
Sbjct: 612 IEDAVLYALGNTVVCESLAEAKLLAFGGKDRVKVITIQGIRITKSGLMSGGGLSSIKS-- 669
Query: 463 GRKATVSTDTSLVKDLEV-KEKRLASLETELRI--LSQQKMEVETQLNCTGNELKYKKQE 519
K++ DT V++L+ ++ LA L +++ + Q+ ++ +Q++ ++ K +
Sbjct: 670 --KSS-QWDTKRVEELKKQRDTILAELSDVIQLNEIFNQRQQLTSQVHQLKSDYSLSKSK 726
Query: 520 YD 521
+
Sbjct: 727 IE 728
Score = 95 (38.5 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 52/245 (21%), Positives = 107/245 (43%)
Query: 10 EERTEKL-TRVQLVETDLKALEPELRKAVNFL-ELENCVQR-KHNEIYQYER-YVNM-KN 64
++R + L T QL + L E+RK L E + +Q + +E+ E+ Y KN
Sbjct: 216 QDRVDSLKTDQQLAK--LYQTTKEMRKEQKLLDESKQQIQSIQSDEMKPLEQQYTQTSKN 273
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
+V Q+E +++ ++ KK + SA+ E+K + +K K++ +I SK S +
Sbjct: 274 QASLHKEVVQLEDDISRLIKGKKKKGSDQYSAEEEIKYISEKIKKTKLILSKAENS--RS 331
Query: 125 KTRFECDIAKSELEIFLSTQSK--ETKKLADLEANLEKVQTTLTERKTL---CEELTTRV 179
K E D ++EL F + K++A+ +++ + E L + T+ +
Sbjct: 332 KQIQEIDQLRNELNEFTEQLENLDDEKEVAETGLSIKMDHQQIEEYNQLKLQSGKETSGL 391
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRS--NNRLIDFVMQL 237
+++ D ++ L++ E + ++ E +E Q + + D +L
Sbjct: 392 KIKYDQLSREHKIEQDQHQQLTYRLEEFETMKKKFQESKEKFQNQKDIEQSNFQDLEQKL 451
Query: 238 KSENR 242
K +
Sbjct: 452 KESEK 456
Score = 42 (19.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 11/53 (20%), Positives = 27/53 (50%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
K+ + KEK+ ++L+ +K ++N T +LK + ++ + D++
Sbjct: 863 KENDEKEKQFKENLSDLQKQHTEKKSQLDKMNITIKDLKKQLSTFNNQITDIE 915
>CGD|CAL0005917 [details] [associations]
symbol:orf19.6893 species:5476 "Candida albicans" [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=IEA]
InterPro:IPR000237 PROSITE:PS50913 GO:GO:0000042 EMBL:AACQ01000144
InterPro:IPR019459 Pfam:PF10375 RefSeq:XP_712851.1 STRING:Q59T54
GeneID:3645552 KEGG:cal:CaO19.14182 CGD:CAL0076041 Uniprot:Q59T54
Length = 453
Score = 134 (52.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 53/237 (22%), Positives = 107/237 (45%)
Query: 11 ERTEKLTRVQLVET--DLKALEPELRKAVNFLELENCVQRKHNEIYQ-YERYVN-MKNLG 66
E E+ T+ Q ++ + L+P + LE +R+ +EI Q Y+ VN + ++
Sbjct: 50 ESEEESTKSQKIDQTGQTEQLDPSATSSTELLEKLQQTERERDEIQQSYDNLVNKISSMK 109
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
+K++Q E EL E ++ T E E K +L+ K +S+ I +K + +
Sbjct: 110 TIFSKMKQSEAELEEKTELVESLTSENEELKRQLQDAAKSKVDSDTI-TKLQEQ--NTDL 166
Query: 127 RFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEI 186
EC+ L TK + + L+ +Q + +L+ +V + SEI
Sbjct: 167 NNECERLSDSL----------TKSRREYNSTLQALQDENYNLENQNSKLSKKVQELNSEI 216
Query: 187 AESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDF--VMQLKSEN 241
+ + L +LT ++ + +E+L +++ K + + + + + DF ++ LK N
Sbjct: 217 NDLKITLNELTMDQKDYTNAIEELTDKLALKTD--EVTEATKTIEDFQALVSLKQSN 271
>UNIPROTKB|F1SIT4 [details] [associations]
symbol:UACA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050728 "negative regulation of inflammatory response"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0043293 "apoptosome" evidence=IEA] [GO:0043280
"positive regulation of cysteine-type endopeptidase activity
involved in apoptotic process" evidence=IEA] [GO:0043065 "positive
regulation of apoptotic process" evidence=IEA] [GO:0042347
"negative regulation of NF-kappaB import into nucleus"
evidence=IEA] [GO:0042307 "positive regulation of protein import
into nucleus" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0009411 "response to UV" evidence=IEA] [GO:0008631 "intrinsic
apoptotic signaling pathway in response to oxidative stress"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005635 "nuclear envelope" evidence=IEA]
InterPro:IPR002110 Pfam:PF00023 PRINTS:PR01415 PROSITE:PS50088
SMART:SM00248 GO:GO:0005739 GO:GO:0005635 GO:GO:0048471
GO:GO:0009411 GO:GO:0008630 GO:GO:0050728 Gene3D:1.25.40.20
InterPro:IPR020683 Pfam:PF12796 SUPFAM:SSF48403 PROSITE:PS50297
GO:GO:0043065 GO:GO:0043280 GeneTree:ENSGT00530000063369
GO:GO:0043293 GO:GO:0042347 GO:GO:0008631 GO:GO:0042307 OMA:NRKEDML
EMBL:CU302364 EMBL:CU313322 Ensembl:ENSSSCT00000005485
Uniprot:F1SIT4
Length = 1391
Score = 140 (54.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 55/238 (23%), Positives = 107/238 (44%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERYVNMKNL 65
K + E L + + ++ L E+ L+ ++ C++ K+ I +E
Sbjct: 915 KVQDSSAEVLANYKKGQEEIVTLHAEIEAQKRELDTIQECIKLKYAPIISFEECERKFKA 974
Query: 66 GEHETKVQQMEQELTANL--ESIKKCTDEMESAKSELKTVEKKGKESNVI--GSKFRWSV 121
E E K Q EQ N+ E +KKC E + K E+ T++K K+ NV+ S
Sbjct: 975 TEKELKEQLSEQTQKCNVTEEEVKKCKQENDKLKKEIFTLQKDLKDKNVLVENSHEMERA 1034
Query: 122 FSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
FS KT K L+ + + E +KLA+ A K + + +TL ++ +
Sbjct: 1035 FSRKTEELNRQLKDLLQKYTEVKG-EKEKLAEENA---KQSSEILAAQTLLQKQHMPLEQ 1090
Query: 182 MESEIAESRARLADLTREEAKLLDQV-EKLAREVSEKRESMQTSRSNNRLIDFVMQLK 238
+E+ + +S + +EE K + EK + V++ R+ ++ ++++ + +Q+K
Sbjct: 1091 VEA-LKKSLNSTIETLKEELKTKQRCYEKEQQTVTQLRQMLENQKNSSVPLAEHLQIK 1147
>UNIPROTKB|F1SRP0 [details] [associations]
symbol:SMC2 "Structural maintenance of chromosomes protein"
species:9823 "Sus scrofa" [GO:0005634 "nucleus" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000796
"condensin complex" evidence=IEA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005634 GO:GO:0005694 GO:GO:0006281
GO:GO:0006310 GO:GO:0030261 GO:GO:0007062 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9 OMA:CQNGKIP
EMBL:CU861938 Ensembl:ENSSSCT00000005946 Uniprot:F1SRP0
Length = 1191
Score = 147 (56.8 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 90/393 (22%), Positives = 168/393 (42%)
Query: 14 EKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQ 73
+ L Q + T ++ +L+K N EN +RK E E + K L E +V+
Sbjct: 301 DALAEAQRINTKSQSAF-DLKKK-NLASEEN--KRKELEKNMVE---DSKTLAAKEKEVK 353
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIA 133
++ L A E+ K + + +A+ V G SN G++ ++ + DI+
Sbjct: 354 KITDGLNALQEASNKDAEALAAAQQHFNAVSA-GLSSNEDGAEA--TLAGQMMACKNDIS 410
Query: 134 KSELEIFLSTQSKETK-KLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRAR 192
K++ T++K+ + KL + L+ QT + + + + + A++ + A
Sbjct: 411 KAQ------TEAKQAQMKLKHAQQELKTKQTEVKKMDSGYRKDQEALEAVKKLKEKLEAE 464
Query: 193 LADLTREEAK---LLDQVEKLAREVSEKRESMQT--SRSNNRLIDFVMQLKSENRVSXXX 247
+ L EE K LL++ +L+R++S +E+ + +R N + K+ NR
Sbjct: 465 MKKLNYEENKEESLLEKRRQLSRDISRLKETYEALLARFPNLRFAYRDPEKNWNRNCVKG 524
Query: 248 XXXXXXXXXXQKYDIAVSTACGALNY-IVTETVEAGEAVIAAVKRQNVGRVNVIPLDKMQ 306
A+ G Y +V +T G+ ++ K + R +IPL+K+
Sbjct: 525 LVASLISVKDISATTALELVAGDRLYNVVVDTEVTGKKLLE--KGELKRRYTIIPLNKIS 582
Query: 307 Q--YHSQCYDKYRT---PENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGY 361
+ +T P NV + L++ + E+ + F F T T V +++ AK+I +
Sbjct: 583 ARCIAPETLKIAQTLVGPNNVHVALSLVEYKPEQKAMEFVFGT--TFVCDNMDNAKKIAF 640
Query: 362 SGGGY-RMVTLEGAIIEPSETLVAQDLNQAKRI 393
R VTL G + +P TL +QA I
Sbjct: 641 DKRIMTRTVTLGGDVFDPHGTLSGGARSQAASI 673
Score = 125 (49.1 bits), Expect = 0.00045, P = 0.00045
Identities = 51/221 (23%), Positives = 101/221 (45%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE 69
+E + +++ E +L+ALE EL L+N ++ Q+E +L +
Sbjct: 678 QELKDVQDELRIKENELQALEEELA------HLKNTAEKYRQLKQQWEMKTEEADL--LQ 729
Query: 70 TKVQQME-QELTANLESIKKCTDEMESAKSELKTVEKKGKES-NVIGSKFRWSVFSAKTR 127
TK+QQ + L+++KK +E E K ++KK +E V+ +K + + A+
Sbjct: 730 TKLQQSSYHKQQEELDALKKIIEESEETLKNTKEIQKKAEEKYEVLENKMKNA--EAERE 787
Query: 128 FECDIAKSELEIFLSTQSKETKKLA-DLEANLEKVQTTLTERKTLCEELTTRVPAMESEI 186
E A+ +L+ + +KK+ + +E + L E K ++ A+ I
Sbjct: 788 RELKDAQRKLDSAKTKADASSKKMKRNSRKEVEAITLELEELKREHASCEQQLEAVNEAI 847
Query: 187 AESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN 227
++A + E AK + V K EV++++E + T++ N
Sbjct: 848 KSYEGQIAVVAAEVAKNKESVNKAQEEVTKQKEVI-TAQDN 887
Score = 96 (38.9 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 34/109 (31%), Positives = 53/109 (48%)
Query: 415 TLVAQDLNQAKRIGYSGGGY-RMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTS 473
T V +++ AK+I + R VTL G + +P GT+SGG + ++ T +
Sbjct: 626 TFVCDNMDNAKKIAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASIL----TKFQELK 681
Query: 474 LVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
V+D L +KE L +LE EL L + E QL + + K +E D
Sbjct: 682 DVQDELRIKENELQALEEELAHL-KNTAEKYRQLK---QQWEMKTEEAD 726
Score = 85 (35.0 bits), Expect = 9.6e-05, Sum P(2) = 9.6e-05
Identities = 50/235 (21%), Positives = 102/235 (43%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFL--ELENCVQ--RKHNEIYQYERYVNM 62
K EE +E +++ + +++ LE K + LE+ + ++ N Q +
Sbjct: 262 KLQEELSENDKKIKALSHEIEELEKRKDKETGGILRSLEDALAEAQRINTKSQSAFDLKK 321
Query: 63 KNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTV-EKKGKESNVIGS-KFRWS 120
KNL E K +++E+ + + +++ E++ L + E K++ + + + ++
Sbjct: 322 KNLASEENKRKELEKNMVEDSKTLAAKEKEVKKITDGLNALQEASNKDAEALAAAQQHFN 381
Query: 121 VFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVP 180
SA D A++ L + + K A EA ++ Q L + + T V
Sbjct: 382 AVSAGLSSNEDGAEATLAGQMMACKNDISK-AQTEA--KQAQMKLKHAQQELKTKQTEVK 438
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM-----QTSRSNNRL 230
M+S + + L + + + KL +++KL E K ES+ Q SR +RL
Sbjct: 439 KMDSGYRKDQEALEAVKKLKEKLEAEMKKLNYE-ENKEESLLEKRRQLSRDISRL 492
Score = 40 (19.1 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 12/59 (20%), Positives = 26/59 (44%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
++ +LE ++ AS E +L +++ E Q+ E+ K+ + +V K
Sbjct: 821 AITLELEELKREHASCEQQLEAVNEAIKSYEGQIAVVAAEVAKNKESVNKAQEEVTKQK 879
>UNIPROTKB|G3N251 [details] [associations]
symbol:CENPE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR001752 InterPro:IPR019821 Pfam:PF00225
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
GO:GO:0005524 GO:GO:0005875 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 GeneTree:ENSGT00680000099922
EMBL:DAAA02016732 Ensembl:ENSBTAT00000063749 Uniprot:G3N251
Length = 2496
Score = 143 (55.4 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 54/237 (22%), Positives = 112/237 (47%)
Query: 7 KYDEERTEKLTRVQLV--ETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKN 64
K EE +KL RV L ET++ ++ EL A + L Q+K E+Y+ ++++ +K
Sbjct: 1400 KEQEEIIDKL-RVDLSKRETEISHIQQELETANDKL------QKKTQELYE-KQFITIKE 1451
Query: 65 LGEHETKVQQMEQ---ELTANLESIK-------KCTDEMESAKSELKTVEKKGKESNVIG 114
+ E + K+ ++EQ L A S++ K T++++ ++ ELKT+ K+G E +
Sbjct: 1452 ISETQEKMSELEQLKEHLKAKDSSLQRKESERLKLTEKLQGSQEELKTIIKEGDELERVQ 1511
Query: 115 SKFRWSVFSAKTRFE---CDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL 171
+ K + DI + + E + K+ + + +E ++ L +K+
Sbjct: 1512 EALQKETDQLKENTKEIVADIQELQEEEHQLLEMKDVSETWEKICEMENLKKQLEAQKST 1571
Query: 172 CEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNN 228
E + + E+ A + +T+E L + E L E+ + +E+++ + S +
Sbjct: 1572 LENTEWENIKLTQRLNENIAEIRSVTKERDDLRNMEETLKVEIDQLKENLRETMSRD 1628
Score = 51 (23.0 bits), Expect = 1.4e-05, Sum P(2) = 1.4e-05
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 469 STDTSLVKDLEVK-EKRLASLETELRILSQQKMEVETQLNCTGNELK-YK----KQEYD- 521
ST ++K ++ EK ++ L+ + L +QK E+ + + +ELK +K K+E
Sbjct: 2334 STKALILKSEYIRLEKEVSRLKQQNEQLMKQKNELSSYYHHLSSELKTWKERMLKREVHK 2393
Query: 522 --TCLIDVKSPK 531
TC KSPK
Sbjct: 2394 EVTCENSPKSPK 2405
Score = 48 (22.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 14/48 (29%), Positives = 29/48 (60%)
Query: 469 STDTSL---VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
+T+T+L +++L+ KE +L ++ +LR Q +++ QL T N +
Sbjct: 1672 NTNTALKAQIQELQEKEHQLLKVKNDLRENMYQTEQLKKQLE-TQNSI 1718
Score = 45 (20.9 bits), Expect = 5.9e-05, Sum P(2) = 5.9e-05
Identities = 12/56 (21%), Positives = 30/56 (53%)
Query: 458 IRGLMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
+RG++ KA ++ + DLE + +L EL+ Q+ +++ +++ T ++
Sbjct: 1799 LRGIVSEKAEEISNMQM--DLENSDAKLQEKVQELKANEQRLFKLKEEISETKKKM 1852
Score = 44 (20.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 474 LVKDLEVKEKRLASLETE-LRILSQQKMEVE 503
L K LE + L S+ETE LR+ + VE
Sbjct: 1708 LKKQLETQNSILESIETEKLRLTQKLHENVE 1738
Score = 44 (20.5 bits), Expect = 7.4e-05, Sum P(2) = 7.4e-05
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
V++L+ E+RL L+ E+ ++ ++E QL NE K
Sbjct: 1828 VQELKANEQRLFKLKEEISETKKKMCDIE-QLK---NEFK 1863
Score = 38 (18.4 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 13/50 (26%), Positives = 24/50 (48%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
+ VS T + ++++ L + T L+ Q+ E E QL N+L+
Sbjct: 1653 RGIVSGKTDEISNIQMN---LENTNTALKAQIQELQEKEHQLLKVKNDLR 1699
>UNIPROTKB|E1B7E3 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0000042
"protein targeting to Golgi" evidence=IEA] InterPro:IPR000237
Pfam:PF01465 PROSITE:PS50913 SMART:SM00755 GO:GO:0005794
GeneTree:ENSGT00700000104373 GO:GO:0000042 Gene3D:1.10.220.60
CTD:2803 SUPFAM:SSF101283 EMBL:DAAA02053637 IPI:IPI00689164
RefSeq:NP_001179054.1 UniGene:Bt.52427 Ensembl:ENSBTAT00000022033
GeneID:538893 KEGG:bta:538893 OMA:ASEKEAC NextBio:20877647
Uniprot:E1B7E3
Length = 2229
Score = 134 (52.2 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 58/237 (24%), Positives = 111/237 (46%)
Query: 2 EVLYGKYDEERTEK-LTRVQLVETDLKALEPELRKAVNF---LELENCVQRKHNEIYQYE 57
E L+ + EE EK L ++ + +T+L++L EL + + LE E V + + + E
Sbjct: 659 ETLFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKTRDKLEEELSVLKDQADRVKQE 718
Query: 58 RYVNM-KNLGEHETKVQQMEQELTANLESIKKCT-DEMESAKSELKTVEKKGKESNVIGS 115
+ + H+ +V + +E +++ +K DE+ LK ++ KE
Sbjct: 719 LEAKLDEQKNHHQQQVDNIIKEQEISIQRTEKALKDEINQLGLLLKEKDRHLKEHQARVE 778
Query: 116 KFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEEL 175
+ ++ E A ++LE+F S Q+ ++ E L ++Q L + +T L
Sbjct: 779 SLEADI--KRSEGELQQASTKLELFQSLQNTTHEQAKVHEEQLAQLQQQLLDLETERILL 836
Query: 176 TTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
T +V +E++ + A L + LL ++EK RE+ EK +S+ T S ++L D
Sbjct: 837 TKQVAEVEAQKKDVCAELDAHKIQVQDLLQKLEKQNREMEEKVKSL-TQLSESQLKD 892
Score = 59 (25.8 bits), Expect = 1.5e-05, Sum P(2) = 1.5e-05
Identities = 16/75 (21%), Positives = 40/75 (53%)
Query: 455 SNPIRGLMGRKATVSTDTSLVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
S+ I ++ R + T+ VK+ L K +++ LE +LR L++++ + + ++L
Sbjct: 1238 SSKISAILSRISHCQQHTAKVKEALLSKTCQVSELEAQLRQLTEEQNILNSSFQHAAHQL 1297
Query: 514 KYKKQEYDTCLIDVK 528
+ K+ + + D++
Sbjct: 1298 EEKESQIQSMKADIE 1312
Score = 52 (23.4 bits), Expect = 8.0e-05, Sum P(2) = 8.0e-05
Identities = 13/53 (24%), Positives = 26/53 (49%)
Query: 469 STDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+T L LE+K K + E +L +L + + + + +E++ KK E +
Sbjct: 1456 NTSKELQVQLELKTKETSEKEEQLTLLKEDLDQQKKRFEYLKSEMEDKKSEME 1508
Score = 47 (21.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 12/53 (22%), Positives = 30/53 (56%)
Query: 476 KDLE-VKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDV 527
K +E +K+K E + L Q+ +++ +L T EL K+++++ ++++
Sbjct: 952 KKMEKIKQKAKEMQEILKKKLLDQEAKLKKELENTALELSQKEKQFNAKILEM 1004
Score = 47 (21.6 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 20/81 (24%), Positives = 37/81 (45%)
Query: 445 EPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVET 504
+P+ + G + + +++S + DLE K LA E E R LSQ+ ++++
Sbjct: 1894 KPTEVLEEGAEGKSTSHVVQPSSLSNMEADHNDLEFK---LAGAEQEKRKLSQEVVKLQK 1950
Query: 505 QLNCTGNE----LKYKKQEYD 521
+ E L K+EY+
Sbjct: 1951 DIRMLRKEHQQELDIIKKEYE 1971
Score = 42 (19.8 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 6/23 (26%), Positives = 17/23 (73%)
Query: 476 KDLEVKEKRLASLETELRILSQQ 498
K+ E+ +++L++ E +R+L ++
Sbjct: 920 KETEILKQKLSAKEDSIRVLQEE 942
>UNIPROTKB|F1NWN3 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:AADN02023593
GeneTree:ENSGT00650000092896 EMBL:AADN02023591 EMBL:AADN02023592
IPI:IPI00591959 Ensembl:ENSGALT00000010535 Uniprot:F1NWN3
Length = 1951
Score = 153 (58.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 64/294 (21%), Positives = 135/294 (45%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNFLELENCVQRK---HNEIYQYERYVNMKN 64
E++ E++ T+++ +E +L+A E +LR VN +++ +R +E + +R +K
Sbjct: 1525 EQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQNEEKRRQLLKQ 1584
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
L EHET+++ ++ + KK +++ +S++ + K +E+ K + +
Sbjct: 1585 LHEHETELEDERKQRALAAAAKKKLEVDVKDLESQVDSANKAREEAIKQLRKLQAQMKDY 1644
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+ + D + EIF + + E KK +LEA L ++Q L + ++ M
Sbjct: 1645 QRDLD-DARAAREEIFATARENE-KKAKNLEAELIQLQEDLAAAERARKQADLEKEEMAE 1702
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNR-LIDFVMQLKSE--- 240
E+A + + L E+ +L ++ +L E+ E+ +++T R + QL +E
Sbjct: 1703 ELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETMSDRMRKAVQQAEQLNNELAT 1762
Query: 241 NRVSXXXXXXXXXXXXXQKYDIA--VSTACGALNYIVTETVEAGEAVIAAVKRQ 292
R + Q ++ + GA+ T+ A EA IA+++ Q
Sbjct: 1763 ERATAQKNENARQQLERQNKELRSKLQEMEGAVKSKFKSTIAALEAKIASLEEQ 1816
Score = 129 (50.5 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 58/229 (25%), Positives = 116/229 (50%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHN-EIYQYERYVNMKNL 65
K + EK R L E +L+AL+ EL ++ + ++ K E+ +R + +
Sbjct: 1118 KAARNKAEKQKR-DLSE-ELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALE-EET 1174
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFSA 124
HE +VQ+M Q+ T +E + + ++ + AK+ L KT + K++ + ++ R S+ A
Sbjct: 1175 RTHEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEIR-SLSQA 1233
Query: 125 KTRFECDIAKSELEIFLST-QSKET----------KKLADLEANLEKVQTTLTERKTLCE 173
K + + K +LE+ L QSK + +K+ L+ +E V + L E ++
Sbjct: 1234 KQ--DVEHKKKKLEVQLQDLQSKYSDGERVRTELNEKVHKLQIEVENVTSLLNEAESKNI 1291
Query: 174 ELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ 222
+LT V + S++ +++ L + TR++ L+ KL R++ + + S+Q
Sbjct: 1292 KLTKDVATLGSQLQDTQELLQEETRQK---LNVTTKL-RQLEDDKNSLQ 1336
Score = 125 (49.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 56/247 (22%), Positives = 112/247 (45%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRK---HNEIYQYERYVNMKNL 65
DEE R Q E +LK LE +K E +N +Q K E+Y + ++ L
Sbjct: 845 DEELQRTKERQQKAEAELKELE---QKHTQLCEEKNLLQEKLQAETELYAEAEEMRVR-L 900
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKT----VEKKGKESNVIGSKFRWSV 121
+ +++++ E+ A +E ++ + ++++ K +++ +E++ +E K +
Sbjct: 901 AAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEK 960
Query: 122 FSAKTRFECDIAKSELEIFL--STQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+A + I K E +I + +K TK+ LE + + T L E + + LT
Sbjct: 961 VTADGK----IKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLK 1016
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM--QTSRSNNRLIDFVMQL 237
ES I+E RL ++E K ++EK+ R++ + + Q + ++ + QL
Sbjct: 1017 NKHESMISELEVRL----KKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQL 1072
Query: 238 -KSENRV 243
K E +
Sbjct: 1073 AKKEEEL 1079
Score = 54 (24.1 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVE 503
+L K + EK A L E+R LSQ K +VE
Sbjct: 1208 NLDKTKQTLEKDNADLANEIRSLSQAKQDVE 1238
Score = 50 (22.7 bits), Expect = 0.00033, Sum P(2) = 0.00033
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
LV + K + LE R L QQ E++TQL +EL+
Sbjct: 1503 LVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQ 1543
Score = 46 (21.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 461 LMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQ---KMEVETQLNCTGNELKYKK 517
L K + T+ V+ +E +K+L + E+ L+QQ K +L T N L+
Sbjct: 1360 LSDSKKKLQEFTATVETMEEGKKKL---QREIESLTQQFEEKAASYDKLEKTKNRLQ--- 1413
Query: 518 QEYDTCLIDVKSPK 531
QE D ++D+ + +
Sbjct: 1414 QELDDLVVDLDNQR 1427
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 482 EKRLASLETELRILSQQKMEVETQLNCTGNELK 514
E ++ASLE +L +++K L +LK
Sbjct: 1807 EAKIASLEEQLEQEAREKQAAAKTLRQKDKKLK 1839
>UNIPROTKB|G1K307 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:AADN02023593
GeneTree:ENSGT00650000092896 EMBL:AADN02023591 EMBL:AADN02023592
Ensembl:ENSGALT00000010533 Uniprot:G1K307
Length = 1972
Score = 153 (58.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 64/294 (21%), Positives = 135/294 (45%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNFLELENCVQRK---HNEIYQYERYVNMKN 64
E++ E++ T+++ +E +L+A E +LR VN +++ +R +E + +R +K
Sbjct: 1537 EQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQNEEKRRQLLKQ 1596
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
L EHET+++ ++ + KK +++ +S++ + K +E+ K + +
Sbjct: 1597 LHEHETELEDERKQRALAAAAKKKLEVDVKDLESQVDSANKAREEAIKQLRKLQAQMKDY 1656
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+ + D + EIF + + E KK +LEA L ++Q L + ++ M
Sbjct: 1657 QRDLD-DARAAREEIFATARENE-KKAKNLEAELIQLQEDLAAAERARKQADLEKEEMAE 1714
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNR-LIDFVMQLKSE--- 240
E+A + + L E+ +L ++ +L E+ E+ +++T R + QL +E
Sbjct: 1715 ELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETMSDRMRKAVQQAEQLNNELAT 1774
Query: 241 NRVSXXXXXXXXXXXXXQKYDIA--VSTACGALNYIVTETVEAGEAVIAAVKRQ 292
R + Q ++ + GA+ T+ A EA IA+++ Q
Sbjct: 1775 ERATAQKNENARQQLERQNKELRSKLQEMEGAVKSKFKSTIAALEAKIASLEEQ 1828
Score = 129 (50.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 58/229 (25%), Positives = 116/229 (50%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHN-EIYQYERYVNMKNL 65
K + EK R L E +L+AL+ EL ++ + ++ K E+ +R + +
Sbjct: 1130 KAARNKAEKQKR-DLSE-ELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALE-EET 1186
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFSA 124
HE +VQ+M Q+ T +E + + ++ + AK+ L KT + K++ + ++ R S+ A
Sbjct: 1187 RTHEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEIR-SLSQA 1245
Query: 125 KTRFECDIAKSELEIFLST-QSKET----------KKLADLEANLEKVQTTLTERKTLCE 173
K + + K +LE+ L QSK + +K+ L+ +E V + L E ++
Sbjct: 1246 KQ--DVEHKKKKLEVQLQDLQSKYSDGERVRTELNEKVHKLQIEVENVTSLLNEAESKNI 1303
Query: 174 ELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ 222
+LT V + S++ +++ L + TR++ L+ KL R++ + + S+Q
Sbjct: 1304 KLTKDVATLGSQLQDTQELLQEETRQK---LNVTTKL-RQLEDDKNSLQ 1348
Score = 125 (49.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 56/247 (22%), Positives = 112/247 (45%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRK---HNEIYQYERYVNMKNL 65
DEE R Q E +LK LE +K E +N +Q K E+Y + ++ L
Sbjct: 857 DEELQRTKERQQKAEAELKELE---QKHTQLCEEKNLLQEKLQAETELYAEAEEMRVR-L 912
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKT----VEKKGKESNVIGSKFRWSV 121
+ +++++ E+ A +E ++ + ++++ K +++ +E++ +E K +
Sbjct: 913 AAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEK 972
Query: 122 FSAKTRFECDIAKSELEIFL--STQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+A + I K E +I + +K TK+ LE + + T L E + + LT
Sbjct: 973 VTADGK----IKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLK 1028
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM--QTSRSNNRLIDFVMQL 237
ES I+E RL ++E K ++EK+ R++ + + Q + ++ + QL
Sbjct: 1029 NKHESMISELEVRL----KKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQL 1084
Query: 238 -KSENRV 243
K E +
Sbjct: 1085 AKKEEEL 1091
Score = 54 (24.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVE 503
+L K + EK A L E+R LSQ K +VE
Sbjct: 1220 NLDKTKQTLEKDNADLANEIRSLSQAKQDVE 1250
Score = 50 (22.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
LV + K + LE R L QQ E++TQL +EL+
Sbjct: 1515 LVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQ 1555
Score = 46 (21.3 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 461 LMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQ---KMEVETQLNCTGNELKYKK 517
L K + T+ V+ +E +K+L + E+ L+QQ K +L T N L+
Sbjct: 1372 LSDSKKKLQEFTATVETMEEGKKKL---QREIESLTQQFEEKAASYDKLEKTKNRLQ--- 1425
Query: 518 QEYDTCLIDVKSPK 531
QE D ++D+ + +
Sbjct: 1426 QELDDLVVDLDNQR 1439
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 482 EKRLASLETELRILSQQKMEVETQLNCTGNELK 514
E ++ASLE +L +++K L +LK
Sbjct: 1819 EAKIASLEEQLEQEAREKQAAAKTLRQKDKKLK 1851
>UNIPROTKB|E1BXA5 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:AADN02023593
GeneTree:ENSGT00650000092896 EMBL:AADN02023591 EMBL:AADN02023592
IPI:IPI00597357 Ensembl:ENSGALT00000010534 Uniprot:E1BXA5
Length = 1979
Score = 153 (58.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 64/294 (21%), Positives = 135/294 (45%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNFLELENCVQRK---HNEIYQYERYVNMKN 64
E++ E++ T+++ +E +L+A E +LR VN +++ +R +E + +R +K
Sbjct: 1544 EQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQNEEKRRQLLKQ 1603
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
L EHET+++ ++ + KK +++ +S++ + K +E+ K + +
Sbjct: 1604 LHEHETELEDERKQRALAAAAKKKLEVDVKDLESQVDSANKAREEAIKQLRKLQAQMKDY 1663
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+ + D + EIF + + E KK +LEA L ++Q L + ++ M
Sbjct: 1664 QRDLD-DARAAREEIFATARENE-KKAKNLEAELIQLQEDLAAAERARKQADLEKEEMAE 1721
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNR-LIDFVMQLKSE--- 240
E+A + + L E+ +L ++ +L E+ E+ +++T R + QL +E
Sbjct: 1722 ELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETMSDRMRKAVQQAEQLNNELAT 1781
Query: 241 NRVSXXXXXXXXXXXXXQKYDIA--VSTACGALNYIVTETVEAGEAVIAAVKRQ 292
R + Q ++ + GA+ T+ A EA IA+++ Q
Sbjct: 1782 ERATAQKNENARQQLERQNKELRSKLQEMEGAVKSKFKSTIAALEAKIASLEEQ 1835
Score = 129 (50.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 58/229 (25%), Positives = 116/229 (50%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHN-EIYQYERYVNMKNL 65
K + EK R L E +L+AL+ EL ++ + ++ K E+ +R + +
Sbjct: 1137 KAARNKAEKQKR-DLSE-ELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALE-EET 1193
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFSA 124
HE +VQ+M Q+ T +E + + ++ + AK+ L KT + K++ + ++ R S+ A
Sbjct: 1194 RTHEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEIR-SLSQA 1252
Query: 125 KTRFECDIAKSELEIFLST-QSKET----------KKLADLEANLEKVQTTLTERKTLCE 173
K + + K +LE+ L QSK + +K+ L+ +E V + L E ++
Sbjct: 1253 KQ--DVEHKKKKLEVQLQDLQSKYSDGERVRTELNEKVHKLQIEVENVTSLLNEAESKNI 1310
Query: 174 ELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ 222
+LT V + S++ +++ L + TR++ L+ KL R++ + + S+Q
Sbjct: 1311 KLTKDVATLGSQLQDTQELLQEETRQK---LNVTTKL-RQLEDDKNSLQ 1355
Score = 125 (49.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 56/247 (22%), Positives = 112/247 (45%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRK---HNEIYQYERYVNMKNL 65
DEE R Q E +LK LE +K E +N +Q K E+Y + ++ L
Sbjct: 864 DEELQRTKERQQKAEAELKELE---QKHTQLCEEKNLLQEKLQAETELYAEAEEMRVR-L 919
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKT----VEKKGKESNVIGSKFRWSV 121
+ +++++ E+ A +E ++ + ++++ K +++ +E++ +E K +
Sbjct: 920 AAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEK 979
Query: 122 FSAKTRFECDIAKSELEIFL--STQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+A + I K E +I + +K TK+ LE + + T L E + + LT
Sbjct: 980 VTADGK----IKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLK 1035
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM--QTSRSNNRLIDFVMQL 237
ES I+E RL ++E K ++EK+ R++ + + Q + ++ + QL
Sbjct: 1036 NKHESMISELEVRL----KKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQL 1091
Query: 238 -KSENRV 243
K E +
Sbjct: 1092 AKKEEEL 1098
Score = 54 (24.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVE 503
+L K + EK A L E+R LSQ K +VE
Sbjct: 1227 NLDKTKQTLEKDNADLANEIRSLSQAKQDVE 1257
Score = 50 (22.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
LV + K + LE R L QQ E++TQL +EL+
Sbjct: 1522 LVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQ 1562
Score = 46 (21.3 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 461 LMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQ---KMEVETQLNCTGNELKYKK 517
L K + T+ V+ +E +K+L + E+ L+QQ K +L T N L+
Sbjct: 1379 LSDSKKKLQEFTATVETMEEGKKKL---QREIESLTQQFEEKAASYDKLEKTKNRLQ--- 1432
Query: 518 QEYDTCLIDVKSPK 531
QE D ++D+ + +
Sbjct: 1433 QELDDLVVDLDNQR 1446
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 482 EKRLASLETELRILSQQKMEVETQLNCTGNELK 514
E ++ASLE +L +++K L +LK
Sbjct: 1826 EAKIASLEEQLEQEAREKQAAAKTLRQKDKKLK 1858
>UNIPROTKB|P10587 [details] [associations]
symbol:MYH11 "Myosin-11" species:9031 "Gallus gallus"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032982 "myosin filament" evidence=IEA] [GO:0008307 "structural
constituent of muscle" evidence=ISS] [GO:0048251 "elastic fiber
assembly" evidence=ISS] [GO:0048739 "cardiac muscle fiber
development" evidence=ISS] [GO:0030241 "skeletal muscle myosin
thick filament assembly" evidence=ISS] [GO:0030016 "myofibril"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA] [GO:0003774
"motor activity" evidence=IEA] [GO:0005859 "muscle myosin complex"
evidence=IEA] [GO:0030485 "smooth muscle contractile fiber"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006939 "smooth muscle contraction" evidence=ISS]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0030016 GO:GO:0006939 GO:GO:0001725
GO:GO:0030485 GO:GO:0008307 Reactome:REACT_115433 GO:GO:0003774
eggNOG:COG5022 GO:GO:0048251 GO:GO:0030241 GO:GO:0048739
GO:GO:0005859 PDB:3J04 PDBsum:3J04 PDB:1I84 PDBsum:1I84
GO:GO:0032982 GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1 EMBL:X06546
IPI:IPI00601453 PIR:S03166 RefSeq:NP_990605.1 UniGene:Gga.3225
PDB:1BR1 PDB:1BR2 PDB:1BR4 PDB:3DTP PDBsum:1BR1 PDBsum:1BR2
PDBsum:1BR4 PDBsum:3DTP DisProt:DP00102 ProteinModelPortal:P10587
SMR:P10587 IntAct:P10587 STRING:P10587 PRIDE:P10587
Ensembl:ENSGALT00000033605 GeneID:396211 KEGG:gga:396211 CTD:4629
InParanoid:P10587 OMA:QYEEKAA EvolutionaryTrace:P10587
NextBio:20816263 Uniprot:P10587
Length = 1979
Score = 153 (58.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 64/294 (21%), Positives = 135/294 (45%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNFLELENCVQRK---HNEIYQYERYVNMKN 64
E++ E++ T+++ +E +L+A E +LR VN +++ +R +E + +R +K
Sbjct: 1544 EQQVEEMKTQLEELEDELQAAEDAKLRLEVNMQAMKSQFERDLQARDEQNEEKRRQLLKQ 1603
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
L EHET+++ ++ + KK +++ +S++ + K +E+ K + +
Sbjct: 1604 LHEHETELEDERKQRALAAAAKKKLEVDVKDLESQVDSANKAREEAIKQLRKLQAQMKDY 1663
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+ + D + EIF + + E KK +LEA L ++Q L + ++ M
Sbjct: 1664 QRDLD-DARAAREEIFATARENE-KKAKNLEAELIQLQEDLAAAERARKQADLEKEEMAE 1721
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNR-LIDFVMQLKSE--- 240
E+A + + L E+ +L ++ +L E+ E+ +++T R + QL +E
Sbjct: 1722 ELASANSGRTSLQDEKRRLEARIAQLEEELDEEHSNIETMSDRMRKAVQQAEQLNNELAT 1781
Query: 241 NRVSXXXXXXXXXXXXXQKYDIA--VSTACGALNYIVTETVEAGEAVIAAVKRQ 292
R + Q ++ + GA+ T+ A EA IA+++ Q
Sbjct: 1782 ERATAQKNENARQQLERQNKELRSKLQEMEGAVKSKFKSTIAALEAKIASLEEQ 1835
Score = 129 (50.5 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 58/229 (25%), Positives = 116/229 (50%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHN-EIYQYERYVNMKNL 65
K + EK R L E +L+AL+ EL ++ + ++ K E+ +R + +
Sbjct: 1137 KAARNKAEKQKR-DLSE-ELEALKTELEDTLDTTATQQELRAKREQEVTVLKRALE-EET 1193
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFSA 124
HE +VQ+M Q+ T +E + + ++ + AK+ L KT + K++ + ++ R S+ A
Sbjct: 1194 RTHEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKTKQTLEKDNADLANEIR-SLSQA 1252
Query: 125 KTRFECDIAKSELEIFLST-QSKET----------KKLADLEANLEKVQTTLTERKTLCE 173
K + + K +LE+ L QSK + +K+ L+ +E V + L E ++
Sbjct: 1253 KQ--DVEHKKKKLEVQLQDLQSKYSDGERVRTELNEKVHKLQIEVENVTSLLNEAESKNI 1310
Query: 174 ELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ 222
+LT V + S++ +++ L + TR++ L+ KL R++ + + S+Q
Sbjct: 1311 KLTKDVATLGSQLQDTQELLQEETRQK---LNVTTKL-RQLEDDKNSLQ 1355
Score = 125 (49.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 56/247 (22%), Positives = 112/247 (45%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRK---HNEIYQYERYVNMKNL 65
DEE R Q E +LK LE +K E +N +Q K E+Y + ++ L
Sbjct: 864 DEELQRTKERQQKAEAELKELE---QKHTQLCEEKNLLQEKLQAETELYAEAEEMRVR-L 919
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKT----VEKKGKESNVIGSKFRWSV 121
+ +++++ E+ A +E ++ + ++++ K +++ +E++ +E K +
Sbjct: 920 AAKKQELEEILHEMEARIEEEEERSQQLQAEKKKMQQQMLDLEEQLEEEEAARQKLQLEK 979
Query: 122 FSAKTRFECDIAKSELEIFL--STQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+A + I K E +I + +K TK+ LE + + T L E + + LT
Sbjct: 980 VTADGK----IKKMEDDILIMEDQNNKLTKERKLLEERVSDLTTNLAEEEEKAKNLTKLK 1035
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM--QTSRSNNRLIDFVMQL 237
ES I+E RL ++E K ++EK+ R++ + + Q + ++ + QL
Sbjct: 1036 NKHESMISELEVRL----KKEEKSRQELEKIKRKLEGESSDLHEQIAELQAQIAELKAQL 1091
Query: 238 -KSENRV 243
K E +
Sbjct: 1092 AKKEEEL 1098
Score = 54 (24.1 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVE 503
+L K + EK A L E+R LSQ K +VE
Sbjct: 1227 NLDKTKQTLEKDNADLANEIRSLSQAKQDVE 1257
Score = 50 (22.7 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
LV + K + LE R L QQ E++TQL +EL+
Sbjct: 1522 LVSSKDDVGKNVHELEKSKRTLEQQVEEMKTQLEELEDELQ 1562
Score = 46 (21.3 bits), Expect = 0.00086, Sum P(2) = 0.00086
Identities = 20/74 (27%), Positives = 36/74 (48%)
Query: 461 LMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQ---KMEVETQLNCTGNELKYKK 517
L K + T+ V+ +E +K+L + E+ L+QQ K +L T N L+
Sbjct: 1379 LSDSKKKLQEFTATVETMEEGKKKL---QREIESLTQQFEEKAASYDKLEKTKNRLQ--- 1432
Query: 518 QEYDTCLIDVKSPK 531
QE D ++D+ + +
Sbjct: 1433 QELDDLVVDLDNQR 1446
Score = 38 (18.4 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 482 EKRLASLETELRILSQQKMEVETQLNCTGNELK 514
E ++ASLE +L +++K L +LK
Sbjct: 1826 EAKIASLEEQLEQEAREKQAAAKTLRQKDKKLK 1858
>ZFIN|ZDB-GENE-061027-393 [details] [associations]
symbol:vmhcl "ventricular myosin heavy chain-like"
species:7955 "Danio rerio" [GO:0016459 "myosin complex"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-061027-393 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00680000099788 EMBL:BX000358 IPI:IPI00616127
Ensembl:ENSDART00000078958 ArrayExpress:F1QXH0 Bgee:F1QXH0
Uniprot:F1QXH0
Length = 1943
Score = 147 (56.8 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 72/360 (20%), Positives = 157/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ AL+ + K + L+ Q+ +++ E
Sbjct: 964 LELTLAKVEKEKHATENKVKNLTEEMAALDDIIAKLTKEKKALQEAHQQTLDDLQSEEDK 1023
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1024 VN--TLTKAKVKLEQQVDDLEGSLEQEKKIRMDLERAKRKLEGDLKLTQESIMDLENDKQ 1081
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE S+++ S + KKL +L+A +E+++ L + ++
Sbjct: 1082 QLEEKLKKKDFEISQLNSKIDDEQSIIIQLQKKLKELQARVEELEEELEAERAARAKVEK 1141
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ + E+ E RL + A ++ +K E + R ++ + + ++
Sbjct: 1142 QRADLARELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATAATLRK 1201
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L + + + E ++ + + N+ +V
Sbjct: 1202 KQADSVAELGEQIDNLQRVKQKLEKEKSE----LRLELDDVASSMEHIVKS--KTNMEKV 1255
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
N D+M +Y ++C ++Y+ N ++Q E + +E+LV+Q L + K
Sbjct: 1256 NRTLEDQMNEYRNKC-EEYQRSLN-DFTTQKAKLQAENDEFSRQLEEKESLVSQ-LTRGK 1312
Score = 44 (20.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 21/58 (36%), Positives = 29/58 (50%)
Query: 469 STDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLN-CTGNELKYKKQEYDTCLI 525
S +TSL+ K+K LET+L SQ + EVE + C E K KK D ++
Sbjct: 1725 SQNTSLINQ---KKK----LETDL---SQFQTEVEEAVQECRNAEEKAKKAITDAAMM 1772
Score = 42 (19.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 478 LEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
L+V E R+ L ++ L QK ++ET L+ E++ QE
Sbjct: 1714 LDVTE-RVQLLHSQNTSLINQKKKLETDLSQFQTEVEEAVQE 1754
Score = 42 (19.8 bits), Expect = 2.6e-05, Sum P(2) = 2.6e-05
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+LE +K SL TEL L E L E K ++E
Sbjct: 1473 ELESSQKEARSLSTELFKLKNSYEESMDHLETMKRENKILQEE 1515
Score = 41 (19.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 15/54 (27%), Positives = 26/54 (48%)
Query: 464 RKATVSTDTS-LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYK 516
+KA + + + LE KE ++ L SQQ +++ QL+ E+K K
Sbjct: 1283 QKAKLQAENDEFSRQLEEKESLVSQLTRGKNSFSQQLEDLKRQLD---EEIKAK 1333
Score = 41 (19.5 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 18/106 (16%), Positives = 44/106 (41%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + L E
Sbjct: 1804 LDEAEQIAMKGGKKQVQKLEARVRELECEVEAEQKRSSESVKGIRKYERRIKELTYQTEE 1863
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K +A L+ +L++ + ++ E++ + K++K +++
Sbjct: 1864 DRKNIARLQDLVDKLQLKVKAYKRAAEESEEQANVHLGKFRKLQHE 1909
Score = 40 (19.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 11/46 (23%), Positives = 22/46 (47%)
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
+ L + L K + LE + L Q+K E++ L L++++
Sbjct: 1517 SDLTEQLGEGGKTIHELEKVRKQLEQEKAEIQAALEEAEGSLEHEE 1562
>TAIR|locus:2045159 [details] [associations]
symbol:TTN7 "AT2G27170" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005634
"nucleus" evidence=ISM;ISS;IDA] [GO:0007059 "chromosome
segregation" evidence=ISS;IMP] [GO:0008278 "cohesin complex"
evidence=ISS] [GO:0000785 "chromatin" evidence=IDA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0016363
"nuclear matrix" evidence=IDA] [GO:0007062 "sister chromatid
cohesion" evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA]
[GO:0010267 "production of ta-siRNAs involved in RNA interference"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0051607 "defense response to
virus" evidence=RCA] InterPro:IPR010935 Pfam:PF06470 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 EMBL:CP002685 GO:GO:0005819 GO:GO:0000785
GO:GO:0003682 HSSP:P01096 GO:GO:0016363 EMBL:AC007154 EMBL:AC007290
GO:GO:0008278 GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
PROSITE:PS51131 EMBL:AJ504805 EMBL:AY525642 EMBL:AK220965
EMBL:AK221283 EMBL:AK226305 EMBL:AK229499 IPI:IPI00549149
PIR:F84669 RefSeq:NP_001077968.1 RefSeq:NP_180285.4
UniGene:At.28786 ProteinModelPortal:Q56YN8 SMR:Q56YN8 STRING:Q56YN8
PRIDE:Q56YN8 EnsemblPlants:AT2G27170.1 EnsemblPlants:AT2G27170.2
GeneID:817259 KEGG:ath:AT2G27170 TAIR:At2g27170
HOGENOM:HOG000166512 InParanoid:Q56YN8 KO:K06669 OMA:NKVLEHF
PhylomeDB:Q56YN8 ProtClustDB:CLSN2692426 Genevestigator:Q56YN8
Uniprot:Q56YN8
Length = 1204
Score = 105 (42.0 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 77/388 (19%), Positives = 168/388 (43%)
Query: 10 EERTEKLTR-VQLVETDLKALEPELRKAVNF-LELENCVQRKHNEIYQYERYVNMKN--L 65
+E ++LT+ +Q + + + +E + KA+ +LE V+ + I + KN L
Sbjct: 271 DESLKELTKELQTLYKEKETVEAQQTKALKKKTKLELDVKDFQDRI---TGNIQSKNDAL 327
Query: 66 GEHETKVQQMEQELTANLESIKKCTD-EMESAKSELKTVEKKGKESNVIGSKF-RWSVFS 123
+ T ++M+ L LE+IK + +++ K + + K +++ K R + FS
Sbjct: 328 EQLNTVEREMQDSLR-ELEAIKPLYESQVDKENQTSKRINELEKTLSILYQKQGRATQFS 386
Query: 124 AKTRFECDIAKS--ELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
K + + K +L+ L + + + +KL D + ++ T LTER ++ +
Sbjct: 387 NKAARDKWLRKEIEDLKRVLDSNTVQEQKLQD---EILRLNTDLTERDEHIKKHEVEIGE 443
Query: 182 MESEIAES------RARLADLTR--------EEAKLLDQVEKLAREVSEKRESMQ--TSR 225
+ES I++S + R D + EE++L +++KL E+ ++++ T
Sbjct: 444 LESRISKSHELFNTKKRERDEEQRKRKEKWGEESQLSSEIDKLKTELERAKKNLDHATPG 503
Query: 226 SNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAV 285
R ++ + ++ ++ R++ +K+ AV G N + VE +
Sbjct: 504 DVRRGLNSIRRICADYRINGVFGPLVELVDCDEKFFTAVEVTAG--NSLFNVVVENDDIS 561
Query: 286 IAAVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATR 345
++ N + + + + + + + + +P L+ ++ D K A
Sbjct: 562 TKIIRHLNSLKGGRVTFLPLNRIKAPRVNYPKDSDAIP-LLKKLKF-DSKFEPALGQVFG 619
Query: 346 ETLVAQDLNQAKRIGYSGGGYRMVTLEG 373
T+V +DLN A R+ +T+EG
Sbjct: 620 RTVVCRDLNVATRVA-KNDDLDCITMEG 646
Score = 101 (40.6 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 42/226 (18%), Positives = 95/226 (42%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV 60
+EV K EE T+ RV+ + D K+L+ L++ EL+ + K E + ++
Sbjct: 242 VEVARTKASEESTKMYDRVEKAQDDSKSLDESLKELTK--ELQTLYKEK--ETVEAQQTK 297
Query: 61 NMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWS 120
+K + E V+ + +T N++S +++ + + E+ + +E I +
Sbjct: 298 ALKKKTKLELDVKDFQDRITGNIQSKNDALEQLNTVEREM---QDSLRELEAIKPLYESQ 354
Query: 121 VFSA-KTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
V +T + + L I Q + T+ ++ A + ++ + + K + + T +
Sbjct: 355 VDKENQTSKRINELEKTLSILYQKQGRATQ-FSNKAARDKWLRKEIEDLKRVLDSNTVQE 413
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSR 225
++ EI L + K ++ +L +S+ E T +
Sbjct: 414 QKLQDEILRLNTDLTERDEHIKKHEVEIGELESRISKSHELFNTKK 459
Score = 101 (40.6 bits), Expect = 4.4e-05, Sum P(3) = 4.4e-05
Identities = 53/245 (21%), Positives = 104/245 (42%)
Query: 11 ERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNE--IYQYERYVNMKNLGEH 68
+R + + V ++ L+ L+ E + + +L+ QRK E IY E + + L +
Sbjct: 185 KRKQIIEVVHYLDERLRELDEEKEELRKYQQLDK--QRKSLEYTIYDKELHDAREKLEQV 242
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKK----GKESNVIGSKFRWSVFSA 124
E + +E T + ++K D+ +S LK + K+ KE + ++ +
Sbjct: 243 EVARTKASEESTKMYDRVEKAQDDSKSLDESLKELTKELQTLYKEKETVEAQ-QTKALKK 301
Query: 125 KTRFECDIAKSELEIFLSTQSKET--KKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
KT+ E D+ + I + QSK ++L +E ++ L K L E +
Sbjct: 302 KTKLELDVKDFQDRITGNIQSKNDALEQLNTVEREMQDSLRELEAIKPLYESQVDKENQT 361
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSR---SNN----RLIDFVM 235
I E L+ L +++ + K AR+ ++E R SN +L D ++
Sbjct: 362 SKRINELEKTLSILYQKQGRATQFSNKAARDKWLRKEIEDLKRVLDSNTVQEQKLQDEIL 421
Query: 236 QLKSE 240
+L ++
Sbjct: 422 RLNTD 426
Score = 90 (36.7 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 25/91 (27%), Positives = 45/91 (49%)
Query: 415 TLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSL 474
T+V +DLN A R+ +T+EG + G M+GG + R + + +T
Sbjct: 621 TVVCRDLNVATRVA-KNDDLDCITMEGDQVSRKGGMTGGFYDHRRSKLRFMNIIMQNT-- 677
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQ 505
K + KEK L + +L+++ QQ ++ T+
Sbjct: 678 -KSINEKEKELEDVRRQLQVIDQQITQLVTE 707
Score = 37 (18.1 bits), Expect = 1.7e-05, Sum P(3) = 1.7e-05
Identities = 7/31 (22%), Positives = 18/31 (58%)
Query: 501 EVETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
++ T+++ + + K+ E T L+D +P+
Sbjct: 752 DIRTRIDQVRSSMSMKEAEMGTELVDHLTPE 782
>UNIPROTKB|E1BG49 [details] [associations]
symbol:CENPE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045860 "positive regulation of protein kinase
activity" evidence=IEA] [GO:0043515 "kinetochore binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000940
"condensed chromosome outer kinetochore" evidence=IEA] [GO:0000778
"condensed nuclear chromosome kinetochore" evidence=IEA]
[GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR001752 InterPro:IPR019821 Pfam:PF00225
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0005875
GO:GO:0000776 GO:GO:0045860 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 GO:GO:0000779 OMA:VKTWKER
GO:GO:0043515 GeneTree:ENSGT00680000099922 EMBL:DAAA02016732
IPI:IPI00692365 Ensembl:ENSBTAT00000011898 Uniprot:E1BG49
Length = 2705
Score = 143 (55.4 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 54/237 (22%), Positives = 112/237 (47%)
Query: 7 KYDEERTEKLTRVQLV--ETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKN 64
K EE +KL RV L ET++ ++ EL A + L Q+K E+Y+ ++++ +K
Sbjct: 1490 KEQEEIIDKL-RVDLSKRETEISHIQQELETANDKL------QKKTQELYE-KQFITIKE 1541
Query: 65 LGEHETKVQQMEQ---ELTANLESIK-------KCTDEMESAKSELKTVEKKGKESNVIG 114
+ E + K+ ++EQ L A S++ K T++++ ++ ELKT+ K+G E +
Sbjct: 1542 ISETQEKMSELEQLKEHLKAKDSSLQRKESERLKLTEKLQGSQEELKTIIKEGDELERVQ 1601
Query: 115 SKFRWSVFSAKTRFE---CDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL 171
+ K + DI + + E + K+ + + +E ++ L +K+
Sbjct: 1602 EALQKETDQLKENTKEIVADIQELQEEEHQLLEMKDVSETWEKICEMENLKKQLEAQKST 1661
Query: 172 CEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNN 228
E + + E+ A + +T+E L + E L E+ + +E+++ + S +
Sbjct: 1662 LENTEWENIKLTQRLNENIAEIRSVTKERDDLRNMEETLKVEIDQLKENLRETMSRD 1718
Score = 51 (23.0 bits), Expect = 1.7e-05, Sum P(2) = 1.7e-05
Identities = 22/72 (30%), Positives = 37/72 (51%)
Query: 469 STDTSLVKDLEVK-EKRLASLETELRILSQQKMEVETQLNCTGNELK-YK----KQEYD- 521
ST ++K ++ EK ++ L+ + L +QK E+ + + +ELK +K K+E
Sbjct: 2543 STKALILKSEYIRLEKEVSRLKQQNEQLMKQKNELSSYYHHLSSELKTWKERMLKREVHK 2602
Query: 522 --TCLIDVKSPK 531
TC KSPK
Sbjct: 2603 EVTCENSPKSPK 2614
Score = 45 (20.9 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 12/56 (21%), Positives = 30/56 (53%)
Query: 458 IRGLMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
+RG++ KA ++ + DLE + +L EL+ Q+ +++ +++ T ++
Sbjct: 1795 LRGIVSEKAEEISNMQM--DLENSDAKLQEKVQELKANEQRLFKLKEEISETKKKM 1848
Score = 44 (20.5 bits), Expect = 8.8e-05, Sum P(2) = 8.8e-05
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
V++L+ E+RL L+ E+ ++ ++E QL NE K
Sbjct: 1824 VQELKANEQRLFKLKEEISETKKKMCDIE-QLK---NEFK 1859
Score = 43 (20.2 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 16/65 (24%), Positives = 37/65 (56%)
Query: 466 ATVSTDTSLVKDLEVKEKRLASLET-ELRILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
+ + D + KD E +K++ L+ EL++L KM+ ++ + NE+K K++++
Sbjct: 1960 SNIQKDLNKSKD-EF-QKKIQELQRKELQLL---KMKDVSKTHKKVNEMKQLKKQFEAQS 2014
Query: 525 IDVKS 529
+ ++S
Sbjct: 2015 LSMQS 2019
Score = 39 (18.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 12/36 (33%), Positives = 19/36 (52%)
Query: 479 EVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
+V EK + +LET LR + M E ++ EL+
Sbjct: 2382 QVTEK-IQALETSLREAKESAMHKEGKIMKMQKELE 2416
Score = 39 (18.8 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 8/38 (21%), Positives = 21/38 (55%)
Query: 481 KEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
KE ++ ++ EL + + +++ Q+N + L+ K+
Sbjct: 2404 KEGKIMKMQKELEMTNDVIAKLQRQVNESNEHLEKTKE 2441
>UNIPROTKB|F1RRC2 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0000042 "protein targeting to Golgi" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
GeneTree:ENSGT00700000104373 GO:GO:0000042 Gene3D:1.10.220.60
SUPFAM:SSF101283 EMBL:CU464176 Ensembl:ENSSSCT00000012310
Uniprot:F1RRC2
Length = 2249
Score = 134 (52.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 57/237 (24%), Positives = 111/237 (46%)
Query: 2 EVLYGKYDEERTEK-LTRVQLVETDLKALEPELR---KAVNFLELENCVQRKHNEIYQYE 57
E+L+ + +E EK L ++ + +T+L++L EL K+ + L+ E V + + + E
Sbjct: 680 EILFQAHIQEMNEKTLEKLDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQE 739
Query: 58 RYVNM-KNLGEHETKVQQMEQELTANLESIKKCT-DEMESAKSELKTVEKKGKESNVIGS 115
+ + +H+ +V + +E +++ +K DE+ LK +K KE
Sbjct: 740 LEAKLDEQKNDHQQQVDSIIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVE 799
Query: 116 KFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEEL 175
V ++ E A ++LE+F S QS ++ E L ++Q L + +T L
Sbjct: 800 NLEADV--KRSEGELQQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILL 857
Query: 176 TTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
T +V +E+ + L + L+ Q+EK E+ E+ +S+ T R ++L D
Sbjct: 858 TKQVDEVETRKKDICTELDTHKIQVQDLMQQLEKQNSEMEERVKSL-TQRYESQLKD 913
Score = 58 (25.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 16/75 (21%), Positives = 40/75 (53%)
Query: 455 SNPIRGLMGRKATVSTDTSLVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
S+ I ++ R + T+ VK+ L K +++ LE +LR L++++ + + ++L
Sbjct: 1259 SSKINAILSRISHCQHHTTKVKEALLSKTCKVSELEIQLRQLTEEQNTLNSSFQHATHQL 1318
Query: 514 KYKKQEYDTCLIDVK 528
+ K+ + + D++
Sbjct: 1319 EEKESQIKSMKADIE 1333
Score = 54 (24.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 476 KDLE-VKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDV 527
K +E VK+K ET + L Q+ +++ +L T EL K+++++ ++++
Sbjct: 973 KKMEKVKQKAKEMQETLKKKLLDQEAKLKKELENTALELSQKEKQFNAKILEM 1025
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 483 KRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTC 523
K+ LETEL+ + + +E+E ++ +E+++ + C
Sbjct: 1530 KKECHLETELKTQTARVVELEERVTQKTSEIEFLNEVLKNC 1570
Score = 44 (20.5 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNE----LKYKKQEYD 521
DLE K LA E E + LSQ+ ++++ L E L K+EY+
Sbjct: 1948 DLEFK---LAGAEQEKQKLSQEVVKLQKDLRMLRKEHQQELDIIKKEYE 1993
>UNIPROTKB|I3LUS9 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0000042
"protein targeting to Golgi" evidence=IEA] InterPro:IPR000237
Pfam:PF01465 PROSITE:PS50913 SMART:SM00755 GO:GO:0005794
GeneTree:ENSGT00700000104373 GO:GO:0000042 Gene3D:1.10.220.60
OMA:LEDKYNE SUPFAM:SSF101283 EMBL:CU464176
Ensembl:ENSSSCT00000022871 Uniprot:I3LUS9
Length = 2255
Score = 134 (52.2 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 57/237 (24%), Positives = 111/237 (46%)
Query: 2 EVLYGKYDEERTEK-LTRVQLVETDLKALEPELR---KAVNFLELENCVQRKHNEIYQYE 57
E+L+ + +E EK L ++ + +T+L++L EL K+ + L+ E V + + + E
Sbjct: 682 EILFQAHIQEMNEKTLEKLDVKQTELESLSSELSEVLKSRDKLQEELSVLKDQADRVKQE 741
Query: 58 RYVNM-KNLGEHETKVQQMEQELTANLESIKKCT-DEMESAKSELKTVEKKGKESNVIGS 115
+ + +H+ +V + +E +++ +K DE+ LK +K KE
Sbjct: 742 LEAKLDEQKNDHQQQVDSIIKEQEMSIQRTEKALKDEINQLGLLLKEKDKHLKEHQAQVE 801
Query: 116 KFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEEL 175
V ++ E A ++LE+F S QS ++ E L ++Q L + +T L
Sbjct: 802 NLEADV--KRSEGELQQASAKLELFQSFQSSTHEQAKAYEEQLAQLQQKLLDSETERILL 859
Query: 176 TTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
T +V +E+ + L + L+ Q+EK E+ E+ +S+ T R ++L D
Sbjct: 860 TKQVDEVETRKKDICTELDTHKIQVQDLMQQLEKQNSEMEERVKSL-TQRYESQLKD 915
Score = 58 (25.5 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 16/75 (21%), Positives = 40/75 (53%)
Query: 455 SNPIRGLMGRKATVSTDTSLVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
S+ I ++ R + T+ VK+ L K +++ LE +LR L++++ + + ++L
Sbjct: 1261 SSKINAILSRISHCQHHTTKVKEALLSKTCKVSELEIQLRQLTEEQNTLNSSFQHATHQL 1320
Query: 514 KYKKQEYDTCLIDVK 528
+ K+ + + D++
Sbjct: 1321 EEKESQIKSMKADIE 1335
Score = 54 (24.1 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 476 KDLE-VKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDV 527
K +E VK+K ET + L Q+ +++ +L T EL K+++++ ++++
Sbjct: 975 KKMEKVKQKAKEMQETLKKKLLDQEAKLKKELENTALELSQKEKQFNAKILEM 1027
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 10/41 (24%), Positives = 23/41 (56%)
Query: 483 KRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTC 523
K+ LETEL+ + + +E+E ++ +E+++ + C
Sbjct: 1532 KKECHLETELKTQTARVVELEERVTQKTSEIEFLNEVLKNC 1572
Score = 44 (20.5 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNE----LKYKKQEYD 521
DLE K LA E E + LSQ+ ++++ L E L K+EY+
Sbjct: 1950 DLEFK---LAGAEQEKQKLSQEVVKLQKDLRMLRKEHQQELDIIKKEYE 1995
>TIGR_CMR|CHY_1443 [details] [associations]
symbol:CHY_1443 "chromosome segregation protein SMC"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0007059 "chromosome
segregation" evidence=ISS] [GO:0030261 "chromosome condensation"
evidence=ISS] InterPro:IPR024704 HAMAP:MF_01894 InterPro:IPR010935
InterPro:IPR011890 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 GO:GO:0005524 GO:GO:0005737
GO:GO:0005694 GO:GO:0003677 EMBL:CP000141 GenomeReviews:CP000141_GR
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 GO:GO:0030261
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553 HOGENOM:HOG000036392
KO:K03529 TIGRFAMs:TIGR02168 OMA:GDITKFI RefSeq:YP_360275.1
ProteinModelPortal:Q3AC59 STRING:Q3AC59 GeneID:3728135
KEGG:chy:CHY_1443 PATRIC:21276017
BioCyc:CHYD246194:GJCN-1442-MONOMER Uniprot:Q3AC59
Length = 1185
Score = 144 (55.7 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 89/396 (22%), Positives = 170/396 (42%)
Query: 7 KYDEERTEKL-TRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNL 65
KY +E +L ++ ++ +KA RK V + N QR+ ++ ER + + NL
Sbjct: 304 KYQQEEENRLWLELKSLKEQIKA---NGRKLVEINQELNSYQRQVKDLKAKEREI-IGNL 359
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAK 125
+ K+ E++L +S++ C DE + + V + + + + S R + S K
Sbjct: 360 KVQKQKLGINEEKLLELKKSLENCKDEQ--FELNFREVSLRNEINFISDSLTRLTNDSLK 417
Query: 126 TRFECDIAKSELEIFLSTQSKETKKLADLEA-NLEKVQTTLTERKTLCEELTT---RVPA 181
E DI + EI + L D + NL K + +RK L EEL +
Sbjct: 418 --IEKDIYELNREI--GEIENTLRSLNDFKKENLRKREVLKNKRKKLEEELNLLAKNILI 473
Query: 182 MESE--IAESRARLADLTREE--AKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+++E + E + ++TR + KL + E ++V E+ ++ N D ++
Sbjct: 474 LQNEKRVLEKKYN-ENITRLQILTKLEESYEGYGKDVKNLFEAKKSGLLPNP--DNIIGT 530
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGR 296
E ++Y +AV TA GA + ++ ++ E +I +K +N+GR
Sbjct: 531 VGE------------FLEVDERYRLAVETALGAGIKNVIVKSSRDLEGIIRYLKLKNLGR 578
Query: 297 VNVIPLDKMQQYHSQCYDKYRTPEN--VPRLIDLIQVQDEKIRLAFYFATRETLVAQDLN 354
+ + LD ++ + T + + +DLI E + A+ + LV +D
Sbjct: 579 ITFLALDLLETESLKGDFSNLTDSDGFIGTALDLISFPQE-LSKAYESLLGKVLVGKDYQ 637
Query: 355 QAKRIGY-SGGGYRMVTLEGAIIEPSETLVAQDLNQ 389
I + Y++V+LEG ++ P ++ NQ
Sbjct: 638 SCLIIAKKTKHRYKVVSLEGELLLPGGIIIGGSFNQ 673
Score = 92 (37.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 54/238 (22%), Positives = 108/238 (45%)
Query: 319 PENVPRLI-DLIQVQDEKIRLAFYFAT----RETLV--AQDLNQAKR-IGYSGGGYRMVT 370
P+N+ + + ++V DE+ RLA A + +V ++DL R + G R+
Sbjct: 524 PDNIIGTVGEFLEV-DERYRLAVETALGAGIKNVIVKSSRDLEGIIRYLKLKNLG-RITF 581
Query: 371 LEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSETL-----VAQDLNQAK 425
L ++E +E+L N G+ G +++ + + E+L V +D
Sbjct: 582 LALDLLE-TESLKGDFSNLTDSDGFIGTALDLISFPQELSKAYESLLGKVLVGKDYQSCL 640
Query: 426 RIGY-SGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVS-----TDTSLVKDLE 479
I + Y++V+LEG ++ P G + GG N ++ RK + D L K+ E
Sbjct: 641 IIAKKTKHRYKVVSLEGELLLPGGIIIGGSFNQTVSVLQRKNEIKLLQKQVDELLQKNNE 700
Query: 480 VKE------KRLASLETELRILSQQKMEVETQL---NCTGNELKYKKQEYDTCLIDVK 528
V+E K+ ++ +++ ++ ++E QL + +K K+ ++ LI++K
Sbjct: 701 VEEALSAFLKKQEDIDATIKLTGEKLSDIEAQLTEADLKEQNIKDKRNLIESRLIELK 758
Score = 87 (35.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 51/229 (22%), Positives = 102/229 (44%)
Query: 26 LKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQELTANLES 85
L+A E ++ KA +L L+ + K Y + +KNL + KV++ E+++T
Sbjct: 201 LQAKEQDVIKAKTYLTLKEKLTFKAKNYYG----IKIKNLLD---KVRENEEKITLLHNL 253
Query: 86 IKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFSAKTRFE-CDIAKS-----ELE 138
I+K D++ ++ K + ++GK + + V + ++ E D K E
Sbjct: 254 IEKNQDQVNRLEASFAKILSEEGK-LGLFSDNLQKIVLNLESCLEKLDNVKKYQQEEENR 312
Query: 139 IFLSTQS-KET-----KKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRAR 192
++L +S KE +KL ++ L Q + + K E+ + + ++ + +
Sbjct: 313 LWLELKSLKEQIKANGRKLVEINQELNSYQRQVKDLKAKEREIIGNLKVQKQKLGINEEK 372
Query: 193 LADLTREEAKLLD-QVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSE 240
L +L + D Q E REVS + E S S RL + ++++ +
Sbjct: 373 LLELKKSLENCKDEQFELNFREVSLRNEINFISDSLTRLTNDSLKIEKD 421
Score = 41 (19.5 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 472 TSLVKDLEVKEKRLAS---LETELRILSQQKMEVETQLN 507
T+L K ++ +K A LETE R L Q+ ++ LN
Sbjct: 913 TTLTKTQKLIQKHFAEISRLETEQRNLLQEINRLKLLLN 951
Score = 39 (18.8 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 12/44 (27%), Positives = 24/44 (54%)
Query: 479 EVK--EKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEY 520
EVK E+R+ L + L++ K ++E L+ E++ + E+
Sbjct: 996 EVKRLEERINFLNQQRNDLNEAKEQLEKLLSQLTEEMEQRFNEF 1039
>ZFIN|ZDB-GENE-030131-5427 [details] [associations]
symbol:ofd1 "oral-facial-digital syndrome 1"
species:7955 "Danio rerio" [GO:0061371 "determination of heart
left/right asymmetry" evidence=IGI;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005929 "cilium" evidence=IEA] [GO:0030030
"cell projection organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0042995 "cell projection"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005813
"centrosome" evidence=IDA] [GO:0060027 "convergent extension
involved in gastrulation" evidence=IGI;IMP] [GO:0060287 "epithelial
cilium movement involved in determination of left/right asymmetry"
evidence=IMP] [GO:0005932 "microtubule basal body"
evidence=IEA;IDA] [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR006594 PROSITE:PS50896 SMART:SM00667
ZFIN:ZDB-GENE-030131-5427 GO:GO:0005634 GO:GO:0005813 GO:GO:0005932
GO:GO:0060027 GO:GO:0061371 GO:GO:0060287 EMBL:BC096786
EMBL:BC164049 IPI:IPI00504025 UniGene:Dr.75489 STRING:Q4V9P7
HOGENOM:HOG000205441 HOVERGEN:HBG097911 Uniprot:Q4V9P7
Length = 906
Score = 127 (49.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 60/246 (24%), Positives = 109/246 (44%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVET--DLKALEPELRKAVNFLELENCVQR--KHNEIYQY 56
M+V K +E E+ +R +++E D++ EL+ +N ++R KH EI +
Sbjct: 218 MDVEIAKVKQEEKER-SRKEILELRRDMEKTY-ELKSEALISREKNAIERLQKHQEIEEK 275
Query: 57 ERYVNMKNLGEHETKVQQMEQELTANLESI-KKCTDEMESAKSELKTVEKKGKESNVIGS 115
+ YV + + V+ E EL +E+ K C E K+ ++ + ++ +E +V
Sbjct: 276 DIYVQRQAVLREIESVRSREMELRQRMEAFDKSCALHEEKVKT-MEDLLRR-RELSV--- 330
Query: 116 KFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEEL 175
K F K + E + K +LE+ K T+KL + E + L + + E
Sbjct: 331 KTMEDSFEQKLKSE--LLKYQLEL-KEENMKRTEKLTENEERIRAEAARLQKEAAVVEAK 387
Query: 176 TTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEK-RESMQTSRSNNRLIDFV 234
T SE+ + L + +R +A LL Q ++L RE E R+ + + L +
Sbjct: 388 TQDYERTSSEVKQLLMEL-ESSRSQASLLKQQKELLREQLENMRDYPELKKHTLELQTRI 446
Query: 235 MQLKSE 240
LK +
Sbjct: 447 SLLKQQ 452
Score = 56 (24.8 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 19/62 (30%), Positives = 32/62 (51%)
Query: 464 RKATVSTDT--SLVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEY 520
+K T+ T SL+K LE K++ L EL S + + ++ +L E K +K+E
Sbjct: 436 KKHTLELQTRISLLKQQLEEKQQHNQRLTQELSAPSHEHLMLQAELRRLEAEHKLEKEEL 495
Query: 521 DT 522
+T
Sbjct: 496 ET 497
Score = 50 (22.7 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 15/50 (30%), Positives = 25/50 (50%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQ----KMEVETQLNCTGNELKYKKQE 519
L ++L L+ ELR L + K E+ETQ N +L+++ Q+
Sbjct: 463 LTQELSAPSHEHLMLQAELRRLEAEHKLEKEELETQKNVLHTQLQHEVQQ 512
>UNIPROTKB|H0Y6I0 [details] [associations]
symbol:GOLGA4 "Golgin subfamily A member 4" species:9606
"Homo sapiens" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913
SMART:SM00755 GO:GO:0000042 Gene3D:1.10.220.60 EMBL:AC097359
HGNC:HGNC:4427 ChiTaRS:GOLGA4 SUPFAM:SSF101283
ProteinModelPortal:H0Y6I0 Ensembl:ENST00000437131 Bgee:H0Y6I0
Uniprot:H0Y6I0
Length = 2099
Score = 133 (51.9 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 60/271 (22%), Positives = 121/271 (44%)
Query: 2 EVLYGKYDEERTEK-LTRVQLVETDLKALEPELR---KAVNFLELENCVQRKHNEIYQYE 57
E+++ + EE EK L ++ + +T+L++L EL KA + LE E V + + + E
Sbjct: 532 EIIFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHKLEEELSVLKDQTDKMKQE 591
Query: 58 RYVNM-KNLGEHETKVQQMEQELTANLESIKKCT-DEMESAKSELKTVEKKGKESNVIGS 115
M + H+ +V + +E +++ +K D++ + LK +K KE
Sbjct: 592 LEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQINQLELLLKERDKHLKEHQAHVE 651
Query: 116 KFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEEL 175
+ ++ E A ++L++F S QS ++ E L ++Q L + +T L
Sbjct: 652 NLEADI--KRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQLAQLQQKLLDLETERILL 709
Query: 176 TTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVM 235
T +V +E++ + L + L+ Q+EK E+ +K +S+ T ++L D
Sbjct: 710 TKQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQNSEMEQKVKSL-TQVYESKLEDGNK 768
Query: 236 QLKSENRVSXXXXXXXXXXXXXQKYDIAVST 266
+ + ++ QK +I + T
Sbjct: 769 EQEQTKQILVEKENMILQMREGQKKEIEILT 799
Score = 57 (25.1 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 16/76 (21%), Positives = 39/76 (51%)
Query: 455 SNPIRGLMGRKATVSTDTSLVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
S+ ++ R + T+ VK+ L +K ++ LE +LR L++++ + ++L
Sbjct: 1111 SSKTNAILSRISHCQHRTTKVKEALLIKTCTVSELEAQLRQLTEEQNTLNISFQQATHQL 1170
Query: 514 KYKKQEYDTCLIDVKS 529
+ K+ + + D++S
Sbjct: 1171 EEKENQIKSMKADIES 1186
Score = 54 (24.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 476 KDLE-VKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDV 527
K +E VK+K ET + L Q+ +++ +L T EL K+++++ ++++
Sbjct: 825 KKMEKVKQKAKEMQETLKKKLLDQEAKLKKELENTALELSQKEKQFNAKMLEM 877
Score = 52 (23.4 bits), Expect = 9.0e-05, Sum P(2) = 9.0e-05
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 482 EKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
+ + L+ +L + S++ E + Q+N EL + + +D CL
Sbjct: 1328 QNTVKELQIQLELKSKEAYEKDEQINLLKEELDQQNKRFD-CL 1369
Score = 48 (22.0 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
D EK+ ++LETEL+ + + ME+E +
Sbjct: 1376 DKSKMEKKESNLETELKSQTARIMELEDHI 1405
Score = 44 (20.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 498 QKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
QK E +L C E K K E D+CL+ K
Sbjct: 1710 QKTLQEKELTCQILEQKIK--ELDSCLVRQK 1738
Score = 44 (20.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 10/53 (18%), Positives = 25/53 (47%)
Query: 469 STDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+T L LE+K K + ++ +L ++ + + +C E++ K + +
Sbjct: 1329 NTVKELQIQLELKSKEAYEKDEQINLLKEELDQQNKRFDCLKGEMEDDKSKME 1381
Score = 44 (20.5 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 464 RKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+K T S + L L+ +E+ + LE +L+ + + E N Y +QE
Sbjct: 1538 KKGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQE 1593
Score = 43 (20.2 bits), Expect = 0.00074, Sum P(2) = 0.00074
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 479 EVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKS 529
E K+ R+ E E +IL+ +E Q+ EL+ KK+E + + VKS
Sbjct: 1445 EEKDNRVK--EAEEKILT-----LENQVYSMKAELETKKKELEHVNLSVKS 1488
>ZFIN|ZDB-GENE-080930-1 [details] [associations]
symbol:smyhc3 "slow myosin heavy chain 3"
species:7955 "Danio rerio" [GO:0016459 "myosin complex"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-080930-1 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
HOVERGEN:HBG004704 HOGENOM:HOG000173959
GeneTree:ENSGT00680000099788 EMBL:CU929259 EMBL:BK006465
IPI:IPI00914342 RefSeq:NP_001129995.1 UniGene:Dr.75622
STRING:B6IDE0 Ensembl:ENSDART00000066527 Ensembl:ENSDART00000150060
GeneID:100001337 KEGG:dre:100001337 CTD:100001337 NextBio:20785001
Uniprot:B6IDE0
Length = 1938
Score = 136 (52.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 70/361 (19%), Positives = 157/361 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ AL+ + K + L+ Q+ +++ E
Sbjct: 959 LELTLAKVEKEKHATENKVKNLTEEMAALDEIIAKLTKEKKALQEAHQQTLDDLQSEEDK 1018
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1019 VN--TLTKAKAKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLTQESVMDLENDKQ 1076
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE S +E + ++ KKL +L+A +E+++ L + ++
Sbjct: 1077 QLEERLKKKDFEISQLSSRIEDEQAMAAQLQKKLKELQARIEELEEELEAERAARAKVEK 1136
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ + E+ E RL + A ++ +K E + R ++ + + ++
Sbjct: 1137 QRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATASTLRK 1196
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + VS QK + S L+ +V+ + +A + N+ ++
Sbjct: 1197 KHADSVSDLGEQIDNLQRVKQKLEKEKSELRLELDDVVSNMEQIAKA------KANLEKM 1250
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M +Y ++ + R+ + + ++Q E L+ +++LV+Q L + K
Sbjct: 1251 CRTLEDQMSEYRTKYEEGQRSINDFT--MKKAKLQTENGELSRQLEEKDSLVSQ-LTRGK 1307
Query: 358 R 358
+
Sbjct: 1308 Q 1308
Score = 53 (23.7 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 21/106 (19%), Positives = 49/106 (46%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAI--IEPSGTMSGG-GSNPIRGLMGRKATVSTDTSLVKD 477
L++A++I GG ++ LE + +E M S+ ++G+ + + T ++
Sbjct: 1799 LDEAEQIAMKGGKKQVQKLEARVRELESEVEMEQRKASDSVKGVRKYERRIKELTYQTEE 1858
Query: 478 LEVKEKRLASL--ETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
RL L + +L++ S ++ E + N K++K +++
Sbjct: 1859 DRKNLARLQDLVDKLQLKVKSYKRTAEEAEEQANSNLGKFRKLQHE 1904
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 11/44 (25%), Positives = 22/44 (50%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
L + + K + LE + L Q+K E++T L L++++
Sbjct: 1514 LTEQIGESGKNIHELEKMRKQLEQEKAEIQTALEEAEGSLEHEE 1557
Score = 40 (19.1 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+LE +K SL TEL L E L E K ++E
Sbjct: 1468 ELESSQKEARSLSTELFKLKNSYEESLDHLESMKRENKNLQEE 1510
>WB|WBGene00011696 [details] [associations]
symbol:eea-1 species:6239 "Caenorhabditis elegans"
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0030139 "endocytic vesicle" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0032266
"phosphatidylinositol-3-phosphate binding" evidence=ISS;IMP]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 SMART:SM00064 SMART:SM00355
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 GO:GO:0030139
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769
GO:GO:0032266 GeneTree:ENSGT00700000104188 KO:K12478 HSSP:Q15075
EMBL:Z81118 EMBL:AY032860 PIR:T24806 RefSeq:NP_001024127.1
UniGene:Cel.5329 ProteinModelPortal:G5ED80 SMR:G5ED80 PRIDE:G5ED80
EnsemblMetazoa:T10G3.5a GeneID:179832 KEGG:cel:CELE_T10G3.5
CTD:179832 WormBase:T10G3.5a OMA:NSRIEEF NextBio:907044
Uniprot:G5ED80
Length = 1205
Score = 146 (56.5 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 60/239 (25%), Positives = 118/239 (49%)
Query: 17 TRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERYVN-----MKNLGEH-E 69
T V E++L L+ +L ++ +F+E L+ V++ NEI + ++ V M++ H +
Sbjct: 676 TTVSTKESELSELKGKLTESNSFIEELKVQVEKVSNEISEKQQEVENLMAEMRDKEAHWK 735
Query: 70 TKVQQMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFSAKTRF 128
TK + E ++ N E ++ + ++S + +L K E G+E N + S + + KT
Sbjct: 736 TKRDEFEAQMLRNQEDNEEASSTLKSVQEQLMKEKETSGEEKNQLIS-VKSQLEELKTEV 794
Query: 129 ECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTER--KTLCEELTTRVPAMESEI 186
E + +SE E TQ E K A E+ + T T +T CE L +++ ++E
Sbjct: 795 E-RLIRSEEE---KTQEIEKLKSAVTATTQERDELTATSESLRTECENLNSKIQSIE--- 847
Query: 187 AESRARLADLTREEA-KLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQ-LKSENRV 243
ESR + E +++ + +L +++ E+ ++Q+ + D ++ LK+ RV
Sbjct: 848 -ESRRHAEEKGSENLERMITEKSRLEKDIEERESTIQSIQEALETKDNEIESLKTTQRV 905
Score = 38 (18.4 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 465 KATVSTDTSLVK--DLEVKEKRLASLETELRILSQQKMEVE 503
K V T T K +LE +K + ET + ++ K + E
Sbjct: 951 KLVVFTGTQSQKQEELEKLQKEIQEKETTIARMTSSKTQFE 991
Score = 37 (18.1 bits), Expect = 3.8e-05, Sum P(2) = 3.8e-05
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 313 YDKYRTPENVPRLIDLIQVQDE 334
Y+K R+ EN R D + E
Sbjct: 1102 YEKERSQENKRRFDDALSAMHE 1123
>MGI|MGI:1339712 [details] [associations]
symbol:Myh8 "myosin, heavy polypeptide 8, skeletal muscle,
perinatal" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0008152 "metabolic
process" evidence=IEA] [GO:0016459 "myosin complex" evidence=IDA]
[GO:0032982 "myosin filament" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 MGI:MGI:1339712
GO:GO:0005524 GO:GO:0030016 GO:GO:0003774 GO:GO:0016459
GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352 InterPro:IPR015650
PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959
GeneTree:ENSGT00680000099790 OrthoDB:EOG43N7BR EMBL:AL596129
CTD:4626 OMA:QLKRNHT EMBL:M12289 IPI:IPI00265380 PIR:B24733
RefSeq:NP_796343.2 UniGene:Mm.340163 ProteinModelPortal:P13542
SMR:P13542 STRING:P13542 PhosphoSite:P13542 PRIDE:P13542
Ensembl:ENSMUST00000019625 GeneID:17885 KEGG:mmu:17885
InParanoid:P13542 NextBio:292697 Bgee:P13542 Genevestigator:P13542
Uniprot:P13542
Length = 1937
Score = 130 (50.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 50/220 (22%), Positives = 105/220 (47%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 960 LELTLAKVEKEKHATENKVKNLTEEMAGLDENIAKLTKEKKALQEAHQQTLDDLQAEEDK 1019
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1020 VN--TLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTM------- 1070
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + + + K E EI S K+ D +A ++Q + E + EEL +
Sbjct: 1071 DIENDKQQLDEKLKKKEFEI-----SNLISKIEDEQAVEIQLQKKIKELQARIEELEEEI 1125
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
A + A++ + +DL+RE ++ +++E+ S + E
Sbjct: 1126 EAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQVE 1165
Score = 59 (25.8 bits), Expect = 3.1e-05, Sum P(2) = 3.1e-05
Identities = 21/106 (19%), Positives = 47/106 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGG---GSNPIRGLMGRKATVSTDTSLVKD 477
L++A+++ GG ++ LE + E G + + ++GL + V T ++
Sbjct: 1800 LDEAEQLALKGGKKQIQKLEARVRELEGEVENEQKRNAEAVKGLRKHERRVKELTYQTEE 1859
Query: 478 LEVKEKRLASLETEL--RILSQQKMEVETQLNCTGNELKYKKQEYD 521
RL L +L ++ S ++ E + N K++K +++
Sbjct: 1860 DRKNVLRLQDLVDKLQAKVKSYKRQAEEAEEQSNANLAKFRKLQHE 1905
Score = 45 (20.9 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K ++ E R+ LE E+ ++QK E +E + K+ Y T
Sbjct: 1813 KQIQKLEARVRELEGEVE--NEQKRNAEAVKGLRKHERRVKELTYQT 1857
>UNIPROTKB|Q13439 [details] [associations]
symbol:GOLGA4 "Golgin subfamily A member 4" species:9606
"Homo sapiens" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=IDA] [GO:0051020 "GTPase binding" evidence=IPI]
[GO:0016192 "vesicle-mediated transport" evidence=TAS] [GO:0005802
"trans-Golgi network" evidence=TAS] InterPro:IPR000237 Pfam:PF01465
PROSITE:PS50913 SMART:SM00755 GO:GO:0005794 GO:GO:0000139
GO:GO:0005802 eggNOG:NOG12793 GO:GO:0043001 PDB:1UPT PDBsum:1UPT
PDB:1R4A PDBsum:1R4A GO:GO:0000042 Gene3D:1.10.220.60 EMBL:U41740
EMBL:X82834 EMBL:AC097359 EMBL:AB209693 EMBL:U31906 EMBL:X76942
IPI:IPI00013272 IPI:IPI00220522 IPI:IPI00927614 IPI:IPI01009738
RefSeq:NP_001166184.1 RefSeq:NP_002069.2 UniGene:Hs.344151
ProteinModelPortal:Q13439 SMR:Q13439 IntAct:Q13439 STRING:Q13439
PhosphoSite:Q13439 DMDM:12643718 PaxDb:Q13439 PRIDE:Q13439
Ensembl:ENST00000356847 Ensembl:ENST00000361924 GeneID:2803
KEGG:hsa:2803 UCSC:uc003cgv.3 UCSC:uc003cgx.3 CTD:2803
GeneCards:GC03P037284 HGNC:HGNC:4427 HPA:HPA035102 MIM:602509
neXtProt:NX_Q13439 PharmGKB:PA28808 HOGENOM:HOG000112753
HOVERGEN:HBG051754 InParanoid:Q13439 OMA:LEDKYNE OrthoDB:EOG4QRH34
PhylomeDB:Q13439 ChiTaRS:GOLGA4 EvolutionaryTrace:Q13439
GenomeRNAi:2803 NextBio:11049 ArrayExpress:Q13439 Bgee:Q13439
CleanEx:HS_GOLGA4 Genevestigator:Q13439 GermOnline:ENSG00000144674
SUPFAM:SSF101283 Uniprot:Q13439
Length = 2230
Score = 133 (51.9 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 60/271 (22%), Positives = 121/271 (44%)
Query: 2 EVLYGKYDEERTEK-LTRVQLVETDLKALEPELR---KAVNFLELENCVQRKHNEIYQYE 57
E+++ + EE EK L ++ + +T+L++L EL KA + LE E V + + + E
Sbjct: 661 EIIFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARHKLEEELSVLKDQTDKMKQE 720
Query: 58 RYVNM-KNLGEHETKVQQMEQELTANLESIKKCT-DEMESAKSELKTVEKKGKESNVIGS 115
M + H+ +V + +E +++ +K D++ + LK +K KE
Sbjct: 721 LEAKMDEQKNHHQQQVDSIIKEHEVSIQRTEKALKDQINQLELLLKERDKHLKEHQAHVE 780
Query: 116 KFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEEL 175
+ ++ E A ++L++F S QS ++ E L ++Q L + +T L
Sbjct: 781 NLEADI--KRSEGELQQASAKLDVFQSYQSATHEQTKAYEEQLAQLQQKLLDLETERILL 838
Query: 176 TTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVM 235
T +V +E++ + L + L+ Q+EK E+ +K +S+ T ++L D
Sbjct: 839 TKQVAEVEAQKKDVCTELDAHKIQVQDLMQQLEKQNSEMEQKVKSL-TQVYESKLEDGNK 897
Query: 236 QLKSENRVSXXXXXXXXXXXXXQKYDIAVST 266
+ + ++ QK +I + T
Sbjct: 898 EQEQTKQILVEKENMILQMREGQKKEIEILT 928
Score = 57 (25.1 bits), Expect = 3.2e-05, Sum P(2) = 3.2e-05
Identities = 16/76 (21%), Positives = 39/76 (51%)
Query: 455 SNPIRGLMGRKATVSTDTSLVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
S+ ++ R + T+ VK+ L +K ++ LE +LR L++++ + ++L
Sbjct: 1240 SSKTNAILSRISHCQHRTTKVKEALLIKTCTVSELEAQLRQLTEEQNTLNISFQQATHQL 1299
Query: 514 KYKKQEYDTCLIDVKS 529
+ K+ + + D++S
Sbjct: 1300 EEKENQIKSMKADIES 1315
Score = 54 (24.1 bits), Expect = 6.4e-05, Sum P(2) = 6.4e-05
Identities = 14/53 (26%), Positives = 31/53 (58%)
Query: 476 KDLE-VKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDV 527
K +E VK+K ET + L Q+ +++ +L T EL K+++++ ++++
Sbjct: 954 KKMEKVKQKAKEMQETLKKKLLDQEAKLKKELENTALELSQKEKQFNAKMLEM 1006
Score = 52 (23.4 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 11/43 (25%), Positives = 23/43 (53%)
Query: 482 EKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
+ + L+ +L + S++ E + Q+N EL + + +D CL
Sbjct: 1457 QNTVKELQIQLELKSKEAYEKDEQINLLKEELDQQNKRFD-CL 1498
Score = 48 (22.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 11/30 (36%), Positives = 19/30 (63%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQL 506
D EK+ ++LETEL+ + + ME+E +
Sbjct: 1505 DKSKMEKKESNLETELKSQTARIMELEDHI 1534
Score = 44 (20.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 498 QKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
QK E +L C E K K E D+CL+ K
Sbjct: 1839 QKTLQEKELTCQILEQKIK--ELDSCLVRQK 1867
Score = 44 (20.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 10/53 (18%), Positives = 25/53 (47%)
Query: 469 STDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+T L LE+K K + ++ +L ++ + + +C E++ K + +
Sbjct: 1458 NTVKELQIQLELKSKEAYEKDEQINLLKEELDQQNKRFDCLKGEMEDDKSKME 1510
Score = 44 (20.5 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 14/56 (25%), Positives = 25/56 (44%)
Query: 464 RKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+K T S + L L+ +E+ + LE +L+ + + E N Y +QE
Sbjct: 1667 KKGTESHLSELNTKLQEREREVHILEEKLKSVESSQSETLIVPRSAKNVAAYTEQE 1722
Score = 43 (20.2 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 479 EVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKS 529
E K+ R+ E E +IL+ +E Q+ EL+ KK+E + + VKS
Sbjct: 1574 EEKDNRVK--EAEEKILT-----LENQVYSMKAELETKKKELEHVNLSVKS 1617
>UNIPROTKB|F1NI59 [details] [associations]
symbol:LZTS1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016242 "negative regulation of macroautophagy"
evidence=IEA] InterPro:IPR009638 Pfam:PF06818 GO:GO:0005886
GO:GO:0005794 GO:GO:0005730 GO:GO:0016242 OMA:ISGHSFH
GeneTree:ENSGT00510000046769 EMBL:AADN02054912 IPI:IPI00588625
Ensembl:ENSGALT00000002650 Uniprot:F1NI59
Length = 606
Score = 132 (51.5 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 60/230 (26%), Positives = 104/230 (45%)
Query: 8 YDEERT---EKLTRV-QLVETDLKALEPELRKAVNFLELE--NCVQRKHNEIYQYERYVN 61
Y+E++ E+L + Q + LK + ++ L+L+ Q K + E +
Sbjct: 304 YEEKQRRCKEELEGLKQRCNSKLKQSSQKTQRTQQVLQLQVFQLQQEKQQLREELENLMK 363
Query: 62 MKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSV 121
+NL ETK++ E+E T+ ++++ E+ E+ ++++ KES + +
Sbjct: 364 EQNL--LETKLRSYEKEKTSFAPALEETQWEVCQKSGEISLLKQQLKESQTELTTKTTEI 421
Query: 122 FSAKTRFECDIAKSE-LEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVP 180
S K + + AK E LE + TQ E L LE + L +K E L +V
Sbjct: 422 LSLKAQLKDVRAKMEGLE--MKTQDLEGS-LRTKAMELEVCENELQRKKNESELLREKVN 478
Query: 181 AMESEIAESRARLADLTRE--EAKLLDQVEKLAREVSEKRESMQTSRSNN 228
+E EI E RA +A L + +A +V+ L EV R +Q R +N
Sbjct: 479 LLEQEIVELRAEMAVLRAQLSDATRPSEVQALQGEVERLRAELQAERDSN 528
>UNIPROTKB|F1P1D5 [details] [associations]
symbol:LOC429272 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016459 "myosin
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00680000099788
EMBL:AADN02026141 EMBL:AADN02026142 EMBL:AADN02026143
IPI:IPI00586103 Ensembl:ENSGALT00000022380 ArrayExpress:F1P1D5
Uniprot:F1P1D5
Length = 1872
Score = 136 (52.9 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 70/360 (19%), Positives = 156/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 893 LELSLAKVEKEKHATENKVKNLTEEMAGLDENITKLTKEKKILQESHQQALDDLQAEEDK 952
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L ++LE KK ++E AK +L+ K +ES ++ K
Sbjct: 953 VN--TLAKAKVKLEQQADDLESSLEQEKKIRMDLERAKRKLEGDLKLAQESIMDLENDKQ 1010
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + ++ KKL +L+A +E+++ L +T ++
Sbjct: 1011 QLEERLKKKDFELNTLNARIEDEQAISAQLQKKLKELQARIEELEEELEAERTGRAKVEK 1070
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E+ RL + + L+ +K E + R ++ + + ++
Sbjct: 1071 LRSELLQELEETSERLEEAGGATSVQLELNKKREAEFQKLRRDLEEATLQHEATAATLRK 1130
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + T E +I A + N+ ++
Sbjct: 1131 KHADSVAELSEQLDNLQRVKQKLEKEKSELKLELDDVNSNT----EQLIKA--KTNLEKM 1184
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + RT ++ ++Q E L+ +E + Q L + K
Sbjct: 1185 CRTTEDQMNEHRSKLEEAQRTVTDLST--QRAKLQTENSELSRQLEEKEAFINQ-LTRGK 1241
Score = 52 (23.4 bits), Expect = 3.4e-05, Sum P(2) = 3.4e-05
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1746 KQLQKLEVRVRELENELE--AEQKRNAESIKGLRKSERRVKELSYQT 1790
Score = 51 (23.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 17/106 (16%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A+++ GG ++ LE + E + + G + + L E
Sbjct: 1733 LDEAEQLALKGGKKQLQKLEVRVRELENELEAEQKRNAESIKGLRKSERRVKELSYQTEE 1792
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K + L+ +L++ + ++ E + N K++K +++
Sbjct: 1793 DRKNMVRLQDLVDKLQLKVKAYKRQAEEAEEQANSNLAKFRKVQHE 1838
Score = 47 (21.6 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLN-CTGNELKYKKQEYD 521
V DL + A L+TE LS+Q E E +N T +L Y +Q D
Sbjct: 1206 VTDLSTQR---AKLQTENSELSRQLEEKEAFINQLTRGKLTYTQQLED 1250
Score = 45 (20.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 353 LNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRI-GYSGGGYRMVTLEGAIIE 411
L++A+++ GG ++ LE + E L A+ A+ I G R+ L E
Sbjct: 1733 LDEAEQLALKGGKKQLQKLEVRVRELENELEAEQKRNAESIKGLRKSERRVKELSYQTEE 1792
Query: 412 PSETLVA-QDL 421
+ +V QDL
Sbjct: 1793 DRKNMVRLQDL 1803
Score = 42 (19.8 bits), Expect = 0.00035, Sum P(2) = 0.00035
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 387 LNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRI 427
L++A+++ GG ++ LE + E L A+ A+ I
Sbjct: 1733 LDEAEQLALKGGKKQLQKLEVRVRELENELEAEQKRNAESI 1773
Score = 40 (19.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 469 STDTSLVKDLEVKEKRLASLETELRILSQQKMEVE 503
S +TSL+ + E ++ L+TE+ Q+ E
Sbjct: 1654 SQNTSLINQKKKMEADISQLQTEVEEAIQECRNAE 1688
Score = 40 (19.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+LE +K SL TEL L E L E K ++E
Sbjct: 1402 ELEASQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEE 1444
Score = 40 (19.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
L + L +K + LE + L +K+E++ L L++++
Sbjct: 1448 LTEQLGASQKSIHELEKVRKQLDAEKLELQAALEEAEASLEHEE 1491
>ZFIN|ZDB-GENE-040426-2784 [details] [associations]
symbol:sass6 "spindle assembly 6 homolog (C.
elegans)" species:7955 "Danio rerio" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007052 "mitotic spindle
organization" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0040016 "embryonic cleavage" evidence=IMP]
[GO:0051298 "centrosome duplication" evidence=IMP] [GO:0000280
"nuclear division" evidence=IMP] [GO:0005813 "centrosome"
evidence=IDA] ZFIN:ZDB-GENE-040426-2784 GO:GO:0005737 GO:GO:0005813
GO:GO:0007052 GO:GO:0051298 GO:GO:0007283 GO:GO:0040016
GO:GO:0000280 CTD:163786 eggNOG:NOG117813 HOGENOM:HOG000124668
HOVERGEN:HBG079167 KO:K16487 OrthoDB:EOG4RNB8V EMBL:BC045420
IPI:IPI00480918 RefSeq:NP_998603.1 UniGene:Dr.77479 PDB:2Y3V
PDB:2Y3W PDBsum:2Y3V PDBsum:2Y3W ProteinModelPortal:Q7ZVT3
GeneID:406747 KEGG:dre:406747 InParanoid:Q7ZVT3
EvolutionaryTrace:Q7ZVT3 NextBio:20818266 ArrayExpress:Q7ZVT3
Uniprot:Q7ZVT3
Length = 627
Score = 132 (51.5 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 52/224 (23%), Positives = 105/224 (46%)
Query: 25 DLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQELTANLE 84
DLKA L + + + R+ N E + + L + +T+V +EQE+ +
Sbjct: 281 DLKAKLTSLEEECQRSKQQVLSLRRENSALDSECHEKERLLNQLQTRVAVLEQEIKDKDQ 340
Query: 85 SIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQ 144
+ + + +E+ + + +VE + + SK +V KS E +
Sbjct: 341 LVLRTKEVLEATQQQKNSVEGNAESKQLQISKLESTV------------KSLSEELIKAN 388
Query: 145 SKETKKLADLEANLEKVQT----TLTERKTLCEELTTRVPAMESEIAESRARLADLTREE 200
K ADL+A L K++ T+ + K L +E + ++ + E+ +++ RL+ E
Sbjct: 389 GIIKKLQADLKALLGKIKVKNSVTVPQEKIL-QETSDKLQRQQRELQDTQQRLSLKEEEA 447
Query: 201 AKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVS 244
AKL +Q+E +++ E RE ++T N +I ++ + +EN++S
Sbjct: 448 AKLKEQLEATVQKLDESREVLKT---NENVITWLNKQLNENQLS 488
>UNIPROTKB|F1N693 [details] [associations]
symbol:LOC100848036 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0042491
"auditory receptor cell differentiation" evidence=IEA] [GO:0030324
"lung development" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR001356 InterPro:IPR003350
InterPro:IPR009057 InterPro:IPR010982 InterPro:IPR017970
Pfam:PF00046 Pfam:PF02376 PROSITE:PS00027 PROSITE:PS50071
PROSITE:PS51042 SMART:SM00389 GO:GO:0005634 GO:GO:0005737
GO:GO:0030324 GO:GO:0043565 GO:GO:0003700 GO:GO:0003682
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0000122 Gene3D:1.10.260.40
SUPFAM:SSF47413 GeneTree:ENSGT00530000063019 GO:GO:0042491
OMA:PPIETSK EMBL:DAAA02058209 EMBL:DAAA02058210 EMBL:DAAA02058211
EMBL:DAAA02058212 EMBL:DAAA02058213 EMBL:DAAA02058214
EMBL:DAAA02058215 EMBL:DAAA02058216 EMBL:DAAA02058217
EMBL:DAAA02058218 EMBL:DAAA02058219 EMBL:DAAA02058220
EMBL:DAAA02058221 EMBL:DAAA02058222 EMBL:DAAA02058223
IPI:IPI01003286 Ensembl:ENSBTAT00000014098 Uniprot:F1N693
Length = 1460
Score = 136 (52.9 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 59/241 (24%), Positives = 115/241 (47%)
Query: 15 KLTRVQLVETDLKALEPELRKA-VNFLELEN---CVQRKHNEIYQYERYVNMKNLGEHET 70
K+ R+ +ET+ + L L + F E++N ++ +I +YE+ +KN + ET
Sbjct: 41 KVQRLHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQ--TLKN--QAET 96
Query: 71 KVQQMEQELTANL-ESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFE 129
+ EQ+L + E +K + S S+L+ E K + K R +F KT+++
Sbjct: 97 IALEKEQKLQNDFAEKERKLQETQMSTTSKLEEAEHKVQTLQTALEKTRTELFDLKTKYD 156
Query: 130 CDI-AKS-ELEIFLST--QSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESE 185
+I AK+ E+E+ ++ ++ + ++A EA + Q + + P +E
Sbjct: 157 EEITAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANHSLQLASQIQKAPDVEQA 216
Query: 186 I-----AESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSE 240
I + A LA RE A+L++ V++L +S+ RE+ S +++ QL ++
Sbjct: 217 IEVLTRSSLEAELAAKEREIAQLVEDVQRLQANLSKLREN-----SASQISQLEQQLSAK 271
Query: 241 N 241
N
Sbjct: 272 N 272
>UNIPROTKB|F1NPB7 [details] [associations]
symbol:LOC429272 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016459 "myosin
complex" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0005634 GO:GO:0030018 GO:GO:0005925 GO:GO:0001725
GO:GO:0008307 GO:GO:0002027 GO:GO:0003774 GO:GO:0030898
GO:GO:0032982 GeneTree:ENSGT00680000099788 EMBL:AADN02026141
EMBL:AADN02026142 EMBL:AADN02026143 IPI:IPI00818026
Ensembl:ENSGALT00000040718 OMA:MVVRINN ArrayExpress:F1NPB7
Uniprot:F1NPB7
Length = 1942
Score = 136 (52.9 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 70/360 (19%), Positives = 156/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 963 LELSLAKVEKEKHATENKVKNLTEEMAGLDENITKLTKEKKILQESHQQALDDLQAEEDK 1022
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L ++LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1023 VN--TLAKAKVKLEQQADDLESSLEQEKKIRMDLERAKRKLEGDLKLAQESIMDLENDKQ 1080
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + ++ KKL +L+A +E+++ L +T ++
Sbjct: 1081 QLEERLKKKDFELNTLNARIEDEQAISAQLQKKLKELQARIEELEEELEAERTGRAKVEK 1140
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E+ RL + + L+ +K E + R ++ + + ++
Sbjct: 1141 LRSELLQELEETSERLEEAGGATSVQLELNKKREAEFQKLRRDLEEATLQHEATAATLRK 1200
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + T E +I A + N+ ++
Sbjct: 1201 KHADSVAELSEQLDNLQRVKQKLEKEKSELKLELDDVNSNT----EQLIKA--KTNLEKM 1254
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + RT ++ ++Q E L+ +E + Q L + K
Sbjct: 1255 CRTTEDQMNEHRSKLEEAQRTVTDLST--QRAKLQTENSELSRQLEEKEAFINQ-LTRGK 1311
Score = 52 (23.4 bits), Expect = 3.7e-05, Sum P(2) = 3.7e-05
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1816 KQLQKLEVRVRELENELE--AEQKRNAESIKGLRKSERRVKELSYQT 1860
Score = 51 (23.0 bits), Expect = 4.6e-05, Sum P(2) = 4.6e-05
Identities = 17/106 (16%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A+++ GG ++ LE + E + + G + + L E
Sbjct: 1803 LDEAEQLALKGGKKQLQKLEVRVRELENELEAEQKRNAESIKGLRKSERRVKELSYQTEE 1862
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K + L+ +L++ + ++ E + N K++K +++
Sbjct: 1863 DRKNMVRLQDLVDKLQLKVKAYKRQAEEAEEQANSNLAKFRKVQHE 1908
Score = 47 (21.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 18/48 (37%), Positives = 24/48 (50%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLN-CTGNELKYKKQEYD 521
V DL + A L+TE LS+Q E E +N T +L Y +Q D
Sbjct: 1276 VTDLSTQR---AKLQTENSELSRQLEEKEAFINQLTRGKLTYTQQLED 1320
Score = 45 (20.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 19/71 (26%), Positives = 32/71 (45%)
Query: 353 LNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRI-GYSGGGYRMVTLEGAIIE 411
L++A+++ GG ++ LE + E L A+ A+ I G R+ L E
Sbjct: 1803 LDEAEQLALKGGKKQLQKLEVRVRELENELEAEQKRNAESIKGLRKSERRVKELSYQTEE 1862
Query: 412 PSETLVA-QDL 421
+ +V QDL
Sbjct: 1863 DRKNMVRLQDL 1873
Score = 42 (19.8 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 387 LNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRI 427
L++A+++ GG ++ LE + E L A+ A+ I
Sbjct: 1803 LDEAEQLALKGGKKQLQKLEVRVRELENELEAEQKRNAESI 1843
Score = 40 (19.1 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 10/35 (28%), Positives = 18/35 (51%)
Query: 469 STDTSLVKDLEVKEKRLASLETELRILSQQKMEVE 503
S +TSL+ + E ++ L+TE+ Q+ E
Sbjct: 1724 SQNTSLINQKKKMEADISQLQTEVEEAIQECRNAE 1758
Score = 40 (19.1 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 14/43 (32%), Positives = 18/43 (41%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+LE +K SL TEL L E L E K ++E
Sbjct: 1472 ELEASQKEARSLSTELFKLKNAYEESLEHLETFKRENKNLQEE 1514
Score = 40 (19.1 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
L + L +K + LE + L +K+E++ L L++++
Sbjct: 1518 LTEQLGASQKSIHELEKVRKQLDAEKLELQAALEEAEASLEHEE 1561
>UNIPROTKB|F1MYM9 [details] [associations]
symbol:MYH11 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048739 "cardiac muscle fiber development"
evidence=IEA] [GO:0048251 "elastic fiber assembly" evidence=IEA]
[GO:0030485 "smooth muscle contractile fiber" evidence=IEA]
[GO:0008307 "structural constituent of muscle" evidence=IEA]
[GO:0006939 "smooth muscle contraction" evidence=IEA] [GO:0005859
"muscle myosin complex" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 GO:GO:0005524 GO:GO:0006939 GO:GO:0001725
GO:GO:0030485 GO:GO:0008307 GO:GO:0003774 GO:GO:0048251
GO:GO:0048739 GO:GO:0005859 GeneTree:ENSGT00650000092896
OMA:QYEEKAA EMBL:DAAA02057559 EMBL:DAAA02057553 EMBL:DAAA02057554
EMBL:DAAA02057555 EMBL:DAAA02057556 EMBL:DAAA02057557
EMBL:DAAA02057558 IPI:IPI00867169 Ensembl:ENSBTAT00000035455
Uniprot:F1MYM9
Length = 1973
Score = 129 (50.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 54/220 (24%), Positives = 108/220 (49%)
Query: 12 RTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHN-EIYQYERYVNMKNLGEHET 70
+ EK R L E +L+AL+ EL ++ + ++ K E+ ++ ++ + HE+
Sbjct: 1137 KAEKQKR-DLGE-ELEALKTELEDTLDSTATQQELRAKREQEVTMLKKALD-EETRSHES 1193
Query: 71 KVQQMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFSAKTRFE 129
+VQ+M Q+ T +E + + ++ + AK+ L K + KE+ + + R V S + + E
Sbjct: 1194 QVQEMRQKHTQVVEELTEQLEQFKRAKANLDKNKQALEKENAELAGELR--VLS-QAKQE 1250
Query: 130 CDIAKSELEIFLST-QSKET---KKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESE 185
+ K +LE+ L QSK + K A+L + K+Q + + E + + +
Sbjct: 1251 VEHKKKKLEVQLQELQSKYSDGEKVRAELNDKVHKLQNEVESVTGMLNEAEGKAIKLAKD 1310
Query: 186 IAESRARLAD---LTREEAKLLDQVEKLAREVSEKRESMQ 222
+A ++L D L +EE + V R++ ++R S+Q
Sbjct: 1311 VASLGSQLQDTQELLQEETRQKLNVSTKLRQLEDERNSLQ 1350
Score = 122 (48.0 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 61/257 (23%), Positives = 117/257 (45%)
Query: 2 EVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRK---HNEIYQYER 58
E + K DE + K R Q E++LK LE +K E +N +Q + E+Y
Sbjct: 852 EEMQAKEDELQKTK-ERQQKAESELKELE---QKHSQLTEEKNLLQEQLQAETELYAEAE 907
Query: 59 YVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKT----VEKKGKESNVIG 114
+ ++ L + +++++ E+ A LE + + ++++ + ++ +E++ +E
Sbjct: 908 EMRVR-LAAKKQELEEILHEMEARLEEEEDRSQQLQAERKKMAQQMLDLEEQLEEEEAAR 966
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQ-----SKETKKLADLEANLEKVQTTLTERK 169
K + +A E I K E +I + SK+ +KL LE + + T L E +
Sbjct: 967 QKLQLEKVTA----EAKIKKLEDDILVMDDQNNKLSKKERKL--LEERISDLTTNLAEEE 1020
Query: 170 TLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM--QTSRSN 227
+ LT ES I+E RL ++E K ++EKL R++ + + Q +
Sbjct: 1021 EKAKNLTKLKNKHESMISELEVRL----KKEEKSRQELEKLKRKLDGEASDLHEQIAELQ 1076
Query: 228 NRLIDFVMQL-KSENRV 243
++ + MQL K E +
Sbjct: 1077 AQIAELKMQLAKKEEEL 1093
Score = 116 (45.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 58/258 (22%), Positives = 120/258 (46%)
Query: 1 MEVLYGKYDEERTEK-LTRVQL-VETDL--KALEPELRKAVNFLELENCVQRKHNEIYQY 56
++ L K+ + EK L + QL ET+L +A E +R A ELE + + +
Sbjct: 875 LKELEQKHSQLTEEKNLLQEQLQAETELYAEAEEMRVRLAAKKQELEEILHEMEARLEEE 934
Query: 57 ERYVNMKNLGEHETKVQQM---EQELTANLESIKKCTDEMESAKSELKTVEKK----GKE 109
E + + E + QQM E++L + +K E +A++++K +E +
Sbjct: 935 EDR-SQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEKVTAEAKIKKLEDDILVMDDQ 993
Query: 110 SNVIGSKFRWSVFSAKTRFECDIAKSELEI--FLSTQSKETKKLADLEANLEKVQTTLTE 167
+N + K R + + ++A+ E + ++K +++LE L+K + + E
Sbjct: 994 NNKLSKKERKLLEERISDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQE 1053
Query: 168 RKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVE----KLAREVSEKRESMQT 223
+ L +L + +IAE +A++A+L + AK ++++ +L E+++K +++
Sbjct: 1054 LEKLKRKLDGEASDLHEQIAELQAQIAELKMQLAKKEEELQAALGRLDDEMAQKNNALKK 1113
Query: 224 SRS-NNRLIDFVMQLKSE 240
R + D L SE
Sbjct: 1114 IRELEGHISDLQEDLDSE 1131
Score = 66 (28.3 bits), Expect = 4.3e-05, Sum P(2) = 4.3e-05
Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVE 503
+L K+ + EK A L ELR+LSQ K EVE
Sbjct: 1222 NLDKNKQALEKENAELAGELRVLSQAKQEVE 1252
Score = 53 (23.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCT 509
VS+ + K++ EK +LET++ + Q E+E +L T
Sbjct: 1518 VSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQAT 1559
>UNIPROTKB|I3LC34 [details] [associations]
symbol:CCDC110 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] GO:GO:0005886 GO:GO:0005794 GO:GO:0005730
GeneTree:ENSGT00700000104188 OMA:FENSISR EMBL:CU571359
Ensembl:ENSSSCT00000025197 Uniprot:I3LC34
Length = 825
Score = 132 (51.5 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 55/243 (22%), Positives = 116/243 (47%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAV---NFLELENCVQRKHNEIYQYERYVNMKNLG 66
EE+ +++ E D K EL+K + N L+ +N ++ N E+ ++ L
Sbjct: 475 EEKNTIQSKLIKTEEDSKECLNELKKIISNYNILQGQNKTLQEKNSQLSLEKQQMIETLD 534
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
+ ++K + + ++ K+ + EMES + + ++++ KE I K + + K
Sbjct: 535 QLKSKEHKTQSDMAIVSNENKRLSIEMESMITNILLLQEE-KE---ILEKKTYQLLKEKG 590
Query: 127 RFECDIAKSELEIFLSTQSKETKKLADLEAN--LEKVQTTLTER---KTLCEELTTRVPA 181
E ++ ++ LEI Q KE +KLA E L+ ++T E+ +T +E TT
Sbjct: 591 SLENELKENHLEIM---QLKEKEKLAKTEQETLLQLIETVKDEKLNLETTLQESTTAREM 647
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID-FVMQLKSE 240
M+ EI + + + T EE L +++ E + + S+ + ++ V+++K++
Sbjct: 648 MKREIEDIQKYKS--TTEE-NFLQEIKNAKSEANIYKNSLSEMGNECEMLSKMVIEIKTD 704
Query: 241 NRV 243
N++
Sbjct: 705 NQI 707
>RGD|1308497 [details] [associations]
symbol:Kif20b "kinesin family member 20B" species:10116 "Rattus
norvegicus" [GO:0003777 "microtubule motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005654 "nucleoplasm"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0005813 "centrosome" evidence=IEA;ISO] [GO:0005874
"microtubule" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA;ISO]
[GO:0050699 "WW domain binding" evidence=IEA;ISO]
InterPro:IPR001752 InterPro:IPR019821 Pfam:PF00225 PRINTS:PR00380
PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129 RGD:1308497
GO:GO:0005524 GO:GO:0005875 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 GeneTree:ENSGT00530000063172
CTD:9585 IPI:IPI00368204 RefSeq:NP_001101079.2 UniGene:Rn.208134
ProteinModelPortal:D3ZX13 Ensembl:ENSRNOT00000054753 GeneID:309523
KEGG:rno:309523 UCSC:RGD:1308497 NextBio:660916 ArrayExpress:D3ZX13
Uniprot:D3ZX13
Length = 1773
Score = 130 (50.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 73/369 (19%), Positives = 161/369 (43%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE 69
E T++L+R + ++A+ E ++ V ++ + E+ + + V +KN +
Sbjct: 991 EFHTQELSRESSFHSSIEAIWEECKEIVKASSKKSHQIQGLEELIE-KLQVEVKNCRDEN 1049
Query: 70 TKVQQMEQELTANLESIKKCTDEMESAKSELK-TVEKKGKESNVIGSKFRWSVFSAKTR- 127
++++ E E + +K+ ++ + EL+ T + ++ R S +R
Sbjct: 1050 SELRAKESEDKNRDQQLKEKESLIQQLREELQETTVSLRVQVQLVAE--REQALSELSRD 1107
Query: 128 FECDIAK-SELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEI 186
C AK +LE+ + TQ +E K+LA+LE Q+ L E+++ +L + +E++
Sbjct: 1108 VTCYKAKVKDLEVMVETQKEECKRLAELE------QSIL-EKESAILKLEASLKELEAKH 1160
Query: 187 AESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLI-DFVMQLKSENRVSX 245
+ L EE K +++ +LA + + ++ +Q+ N + +LK E +
Sbjct: 1161 QDHIRSTTHLNAEEVKFREEITQLANNLHDTKQLLQSKEEENEISRQETEKLKEELAANS 1220
Query: 246 XXXXXXXXXXXXQKYDIAVSTACGALNYIVTET---VEAGEAVIAAVKRQNVG-RVNVIP 301
++ D C L T+ +E + ++ ++ + R +
Sbjct: 1221 VLTQNLQADLQRKEED------CAELKEKFTDAKKQIEQVQREVSVMRDEEKSLRTKINE 1274
Query: 302 LDKMQQYHSQCYD-KYRTPENVP------RLIDLIQ-----VQDEKIRLAFYFATRETLV 349
L+K + +SQ D K RT + + ++ +++Q +D ++ A R TLV
Sbjct: 1275 LEKKKNQYSQEIDMKQRTIQQLKEQLSNQKMEEVVQQYEKVCKDLSVKEKLIEAMRLTLV 1334
Query: 350 AQDLNQAKR 358
Q+ QA++
Sbjct: 1335 EQEQTQAEQ 1343
Score = 56 (24.8 bits), Expect = 5.1e-05, Sum P(2) = 5.1e-05
Identities = 15/47 (31%), Positives = 21/47 (44%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
KDL VKEK + ++ L Q + E + L E + E DT
Sbjct: 1317 KDLSVKEKLIEAMRLTLVEQEQTQAEQDRMLEAKSQEADWLAGELDT 1363
>ZFIN|ZDB-GENE-030131-271 [details] [associations]
symbol:smyhc1 "slow myosin heavy chain 1"
species:7955 "Danio rerio" [GO:0016459 "myosin complex"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0031444 "slow-twitch
skeletal muscle fiber contraction" evidence=IGI] [GO:0003779 "actin
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0030240 "skeletal muscle thin filament assembly"
evidence=IMP] [GO:0071688 "striated muscle myosin thick filament
assembly" evidence=IMP] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 ZFIN:ZDB-GENE-030131-271 GO:GO:0005524 GO:GO:0071688
GO:GO:0030240 GO:GO:0003774 GO:GO:0016459 GO:GO:0031444
GeneTree:ENSGT00680000099788 EMBL:CU929259 IPI:IPI00934366
Ensembl:ENSDART00000056853 Bgee:F1QIR4 Uniprot:F1QIR4
Length = 1939
Score = 142 (55.0 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 70/361 (19%), Positives = 158/361 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ AL+ + K + L+ Q+ +++ E
Sbjct: 960 LELTLAKVEKEKHATENKVKNLTEEMAALDEIIAKLTKEKKALQEAHQQTLDDLQSEEDK 1019
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1020 VN--TLTKAKAKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLTQESIMDLENDKQ 1077
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE S++E + ++ KKL +L+A +E+++ L + ++
Sbjct: 1078 QMEEKLKKKDFEISQLNSKIEDEQALGAQLQKKLKELQARIEELEEELEAERAARAKVEK 1137
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ + E+ E RL + A ++ +K E + R ++ + + ++
Sbjct: 1138 QRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEEATLQHEATAATLRK 1197
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L + + V E ++ + + N+ ++
Sbjct: 1198 KHADSVADLGEQIDNLQRVKQKLEKEKSE----LKLELDDVVSNMEQIVKS--KSNLEKM 1251
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M +Y ++ + RT + + ++Q E L+ +++LV+Q L + K
Sbjct: 1252 CRTLEDQMSEYRTKAEEGQRTINDFT--MQKAKLQTENGELSRQLEEKDSLVSQ-LTRGK 1308
Query: 358 R 358
+
Sbjct: 1309 Q 1309
Score = 51 (23.0 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 21/106 (19%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + L E
Sbjct: 1800 LDEAEQIAMKGGKKQVQKLEARVRELENEVELEQRKASESVKGVRKYERRIKELTYQTEE 1859
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K LA L+ +L++ S ++ E + N K++K +++
Sbjct: 1860 DRKNLARLQDLVDKLQLKVKSYKRAAEEAEEQANSNLGKFRKLQHE 1905
Score = 49 (22.3 bits), Expect = 8.8e-05, Sum P(3) = 8.8e-05
Identities = 16/43 (37%), Positives = 20/43 (46%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+LE +K SL TEL L EV QL E K ++E
Sbjct: 1469 ELESAQKESRSLSTELFKLKNSYEEVLDQLETMKRENKNLQEE 1511
Score = 45 (20.9 bits), Expect = 0.00022, Sum P(3) = 0.00022
Identities = 12/46 (26%), Positives = 23/46 (50%)
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
+ L + L K + LE + L Q+K E++T L L++++
Sbjct: 1513 SDLTEQLGETGKSIHELEKIRKQLEQEKAEIQTALEEAEGSLEHEE 1558
Score = 38 (18.4 bits), Expect = 5.6e-05, Sum P(3) = 5.6e-05
Identities = 9/27 (33%), Positives = 16/27 (59%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPEL 33
K D+ER E TR+ ++ + +PE+
Sbjct: 18 KSDKERLEAQTRIFDMKKECFVPDPEV 44
>UNIPROTKB|F1PDF4 [details] [associations]
symbol:MYH7 "Myosin-7" species:9615 "Canis lupus
familiaris" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF01576 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00680000099788
EMBL:AAEX03005612 Ensembl:ENSCAFT00000018439 Uniprot:F1PDF4
Length = 1659
Score = 129 (50.5 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 69/360 (19%), Positives = 155/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 680 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 739
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 740 VN--TLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQ 797
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + S+ KKL +L+A +E+++ L +T ++
Sbjct: 798 QLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKVEK 857
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E RL + + ++ +K E + R ++ + + ++
Sbjct: 858 LRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRK 917
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + E +I A + N+ ++
Sbjct: 918 KHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNM----EQIIKA--KANLEKM 971
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + R+ ++ ++Q E L+ +E L++Q L + K
Sbjct: 972 CRTLEDQMNEHRSKAEETQRSVNDLTS--QRAKLQTENGELSRQLDEKEALISQ-LTRGK 1028
Score = 56 (24.8 bits), Expect = 5.7e-05, Sum P(2) = 5.7e-05
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1520 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1579
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1580 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1625
Score = 53 (23.7 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1533 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1577
>MGI|MGI:1930136 [details] [associations]
symbol:Pmfbp1 "polyamine modulated factor 1 binding protein
1" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:1930136 GO:GO:0005737
HSSP:Q9WZF7 CTD:83449 eggNOG:NOG138716 HOGENOM:HOG000060143
HOVERGEN:HBG072641 EMBL:AB029919 IPI:IPI00126340 RefSeq:NP_064322.1
UniGene:Mm.42166 ProteinModelPortal:Q9WVQ0 PhosphoSite:Q9WVQ0
PRIDE:Q9WVQ0 Ensembl:ENSMUST00000034162 GeneID:56523 KEGG:mmu:56523
GeneTree:ENSGT00390000012700 InParanoid:Q9WVQ0 OMA:IMKDMMK
OrthoDB:EOG4Q2DF1 ChiTaRS:PMFBP1 NextBio:312854 Bgee:Q9WVQ0
CleanEx:MM_PMFBP1 Genevestigator:Q9WVQ0 Uniprot:Q9WVQ0
Length = 1022
Score = 133 (51.9 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 51/241 (21%), Positives = 115/241 (47%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV 60
++ L +Y E + L + +L++ + L EL K N ++++N ++ K E+ + +
Sbjct: 396 LQDLQQQYTESQKLSLKKDKLLQDKDERLH-ELEK--NLMQVQNSLREKEAELEKLQCTT 452
Query: 61 NMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWS 120
+ E + + + A I+K D +E A+ +LK + N+ SK +
Sbjct: 453 KELDTSLQEARQSTSKIDCEALRAEIQKLKDSLEEAREQLKV-----SDQNLTQSKEE-A 506
Query: 121 VFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVP 180
SA + + A ++E L ++ + + DL++ L K+Q ++ + + R+
Sbjct: 507 HLSASS---LEDAHRKIENCLLQDKQKEEVIKDLQSQLHKLQKESSKIEEERKHNRQRLQ 563
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNR-LIDFVMQLKS 239
+ SE++E + RL++ +E++ L +++ +++ E S Q S R L + + +L+
Sbjct: 564 ELSSELSEGQRRLSNAEKEKSLLQKTLDEDEKKIDELFHSTQVSEQKQRELTNSIRKLEE 623
Query: 240 E 240
E
Sbjct: 624 E 624
Score = 47 (21.6 bits), Expect = 6.0e-05, Sum P(2) = 6.0e-05
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
L +V E++ L +R L ++ +E++ L +LK K++
Sbjct: 600 LFHSTQVSEQKQRELTNSIRKLEEELLEIKGLLEEKREQLKKSKEQ 645
Score = 37 (18.1 bits), Expect = 0.00062, Sum P(2) = 0.00062
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 467 TVSTDTSLVKDLEVKEKRLASLETELRILS--QQKMEVE 503
T L ++ E+R+ L EL+ L QQ+ E E
Sbjct: 785 TQERKAQLEDEIAAYEERMKKLNMELKKLQGFQQQSEQE 823
>RGD|62030 [details] [associations]
symbol:Myh7 "myosin, heavy chain 7, cardiac muscle, beta"
species:10116 "Rattus norvegicus" [GO:0000146 "microfilament motor
activity" evidence=IMP] [GO:0000302 "response to reactive oxygen
species" evidence=IEP] [GO:0001725 "stress fiber" evidence=ISO]
[GO:0002027 "regulation of heart rate" evidence=ISO] [GO:0003779
"actin binding" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IMP] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005859 "muscle myosin
complex" evidence=IDA] [GO:0005925 "focal adhesion" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO;IMP] [GO:0006936
"muscle contraction" evidence=ISO;IMP] [GO:0007512 "adult heart
development" evidence=ISO] [GO:0008307 "structural constituent of
muscle" evidence=ISO] [GO:0016459 "myosin complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO;IMP] [GO:0030016
"myofibril" evidence=IEA;ISO] [GO:0030018 "Z disc" evidence=ISO]
[GO:0030049 "muscle filament sliding" evidence=ISO] [GO:0030898
"actin-dependent ATPase activity" evidence=ISO] [GO:0032982 "myosin
filament" evidence=IEA;ISO] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0046982 "protein heterodimerization
activity" evidence=IDA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=ISO] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 RGD:62030 GO:GO:0005524
GO:GO:0005634 GO:GO:0042803 GO:GO:0030018 GO:GO:0005925
GO:GO:0016887 GO:GO:0000302 GO:GO:0006936 GO:GO:0000146
GO:GO:0001725 GO:GO:0030049 GO:GO:0008307 GO:GO:0046982
GO:GO:0007512 GO:GO:0002027 eggNOG:COG5022 GO:GO:0055010
GO:GO:0005859 GO:GO:0030898 GO:GO:0032982 HOVERGEN:HBG004704
KO:K10352 HOGENOM:HOG000173959 OrthoDB:EOG42JNQH UniGene:Rn.54399
CTD:4625 EMBL:X15939 EMBL:J00752 EMBL:M32698 IPI:IPI00189811
PIR:S06006 RefSeq:NP_058936.1 UniGene:Rn.225886
ProteinModelPortal:P02564 SMR:P02564 IntAct:P02564 STRING:P02564
PhosphoSite:P02564 PRIDE:P02564 GeneID:29557 KEGG:rno:29557
UCSC:RGD:62030 InParanoid:P02564 NextBio:609598 ArrayExpress:P02564
Genevestigator:P02564 GermOnline:ENSRNOG00000016983 Uniprot:P02564
Length = 1935
Score = 130 (50.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 69/360 (19%), Positives = 156/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 957 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIVKLTKEKKALQEAHQQALDDLQAEEDK 1016
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +L+ KK ++E AK +L+ K +ES ++ K
Sbjct: 1017 VN--TLTKAKVKLEQQVDDLEGSLDQDKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQ 1074
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + S+ KKL +L+A +E+++ L +T ++
Sbjct: 1075 QLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKVEK 1134
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E RL + + ++ +K E + R ++ + + ++
Sbjct: 1135 LRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRK 1194
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + E +I A + N+ ++
Sbjct: 1195 KHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNM----EQIIKA--KANLEKM 1248
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + R+ ++ R ++Q E L+ +E L++Q L + K
Sbjct: 1249 CRTLEDQMNEHRSKAEETQRSVNDLTR--QRAKLQTENGELSRQLDEKEALISQ-LTRGK 1305
Score = 56 (24.8 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1797 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1856
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1857 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1902
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1810 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1854
>UNIPROTKB|F1MA98 [details] [associations]
symbol:Tpr "Protein Tpr" species:10116 "Rattus norvegicus"
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0000189 "MAPK import into
nucleus" evidence=ISS] [GO:0000776 "kinetochore" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0003729 "mRNA
binding" evidence=ISS] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] [GO:0005487 "nucleocytoplasmic transporter activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISS] [GO:0005643 "nuclear pore"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005868
"cytoplasmic dynein complex" evidence=ISS] [GO:0006404 "RNA import
into nucleus" evidence=ISS] [GO:0006405 "RNA export from nucleus"
evidence=ISS] [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=ISS] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=ISS] [GO:0010965
"regulation of mitotic sister chromatid separation" evidence=ISS]
[GO:0019898 "extrinsic to membrane" evidence=ISS] [GO:0031072 "heat
shock protein binding" evidence=ISS] [GO:0031453 "positive
regulation of heterochromatin assembly" evidence=ISS] [GO:0031965
"nuclear membrane" evidence=IDA] [GO:0031990 "mRNA export from
nucleus in response to heat stress" evidence=ISS] [GO:0034399
"nuclear periphery" evidence=IDA] [GO:0034605 "cellular response to
heat" evidence=ISS] [GO:0035457 "cellular response to
interferon-alpha" evidence=ISS] [GO:0042307 "positive regulation of
protein import into nucleus" evidence=ISS] [GO:0042405 "nuclear
inclusion body" evidence=IDA] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0044615 "nuclear pore nuclear basket"
evidence=IDA] [GO:0045947 "negative regulation of translational
initiation" evidence=ISS] [GO:0046827 "positive regulation of
protein export from nucleus" evidence=IMP] [GO:0046832 "negative
regulation of RNA export from nucleus" evidence=ISS] [GO:0051019
"mitogen-activated protein kinase binding" evidence=ISS]
[GO:0070849 "response to epidermal growth factor stimulus"
evidence=ISS] [GO:0072686 "mitotic spindle" evidence=ISS]
[GO:0090267 "positive regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=ISS] [GO:0090316 "positive regulation
of intracellular protein transport" evidence=ISS] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=ISS]
[GO:0005215 "transporter activity" evidence=ISS] [GO:0006606
"protein import into nucleus" evidence=ISS] [GO:0006611 "protein
export from nucleus" evidence=ISS] [GO:0031647 "regulation of
protein stability" evidence=ISS] [GO:0042306 "regulation of protein
import into nucleus" evidence=IMP] [GO:0043495 "protein anchor"
evidence=ISS] [GO:0043578 "nuclear matrix organization"
evidence=ISS] [GO:0051292 "nuclear pore complex assembly"
evidence=IMP] InterPro:IPR012929 InterPro:IPR015866 Pfam:PF07926
RGD:1310664 GO:GO:0005524 GO:GO:0005737 GO:GO:0005643 GO:GO:0006606
KO:K09291 InterPro:IPR009053 SUPFAM:SSF46579
GeneTree:ENSGT00700000104019 GO:GO:0004828 GO:GO:0006434
Gene3D:1.10.287.40 CTD:7175 IPI:IPI00950468 RefSeq:NP_001100655.1
UniGene:Rn.58980 Ensembl:ENSRNOT00000063833 GeneID:304862
KEGG:rno:304862 NextBio:653738 ArrayExpress:F1MA98 Uniprot:F1MA98
Length = 2360
Score = 125 (49.1 bits), Expect = 0.00096, P = 0.00096
Identities = 54/237 (22%), Positives = 107/237 (45%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV-NMK-NLG 66
D E KL + + T K ++ +L + V L+ E + R + + + + ++K +L
Sbjct: 1350 DTEEYRKLLSEKEIHT--KRIQ-QLNEEVGRLKAE--IARSNASLTNNQNLIQSLKEDLS 1404
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
+ T+ + ++++L A + I++ + K + + + +E S S+
Sbjct: 1405 KVRTEKESIQKDLDAKIIDIQEKVKTITQVKKIGRRYKTQFEELKAQQKAMETSTQSSGD 1464
Query: 127 RFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEI 186
E I+ E++ S+ K LE +E +Q TL+E++T L + ++SE+
Sbjct: 1465 HQEQHISVQEMQELKDNLSQSETKTKSLEGQVENLQKTLSEKETEARSLQEQTAQLQSEL 1524
Query: 187 AESRARLADLTREEAKLLDQVEKLAREVSEKR-ESMQTSRSNNRLIDFVM-QLKSEN 241
+ R L D T +E +L Q+ E EK +++ +RS + V QL EN
Sbjct: 1525 SRLRQELQDKTTKEEQLRQQMN----EKDEKTWKAITVARSKIAHLSGVKDQLTKEN 1577
Score = 122 (48.0 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 47/211 (22%), Positives = 103/211 (48%)
Query: 20 QLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETK-VQQMEQE 78
Q+ E K +E L+++ F + +++K E+ + E+ + L + + K ++ MEQ+
Sbjct: 981 QVTEEVHKNIEVRLKESAEF---QTQLEKKLMEV-EKEK----QELQDDKRKAIESMEQQ 1032
Query: 79 LTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELE 138
LT +++ E++ A T +++ + A+ ++E ++ +
Sbjct: 1033 LTELKKTLSSVQSEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAAD 1092
Query: 139 I-FLSTQSKETKKLADLEANLE----KVQTTLTERKTLCEELTTRVPAMESEIAESRARL 193
+ L ++ K+A + +LE K ++ L E K EE R ++ E+++S +R
Sbjct: 1093 VEALQAAKEQVSKMASVRQHLEETTQKAESQLLECKASWEE---RERVLKDEVSKSVSRC 1149
Query: 194 ADLTREEAKLLDQVEKLA-REVSEKRESMQT 223
DL ++ L DQ+EKL+ + V+ +E +Q+
Sbjct: 1150 EDLEKQNRLLHDQIEKLSDKVVTSMKEVVQS 1180
Score = 66 (28.3 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 32/126 (25%), Positives = 59/126 (46%)
Query: 405 LEGAIIEPSETLVAQDLNQAKRIG--YSGGGYRMVTLEGAIIEPSGTMSGGGSNP---IR 459
L+ II+ E + + + Q K+IG Y + + + +E S SG ++
Sbjct: 1417 LDAKIIDIQEKV--KTITQVKKIGRRYKTQ-FEELKAQQKAMETSTQSSGDHQEQHISVQ 1473
Query: 460 GLMGRKATVSTDTSLVKDLEVK----EKRLASLETELRILSQQKMEVETQLNCTGNELKY 515
+ K +S + K LE + +K L+ ETE R L +Q +++++L+ EL+
Sbjct: 1474 EMQELKDNLSQSETKTKSLEGQVENLQKTLSEKETEARSLQEQTAQLQSELSRLRQELQD 1533
Query: 516 K--KQE 519
K K+E
Sbjct: 1534 KTTKEE 1539
>UNIPROTKB|J9P2D7 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR000306 Pfam:PF01363 SMART:SM00064 GO:GO:0046872
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
GeneTree:ENSGT00700000104373 EMBL:AAEX03009934 EMBL:AAEX03009935
Ensembl:ENSCAFT00000044773 Uniprot:J9P2D7
Length = 1364
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 57/229 (24%), Positives = 110/229 (48%)
Query: 30 EPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQME----QELTANLES 85
E +L+ +N L+ ++K E Q E + E E+K+QQ QELTA E
Sbjct: 907 EQQLQGTINELKQLTEQKKKQIEALQGEVKTAISQKTELESKLQQQSTQAAQELTAEKEK 966
Query: 86 IKKCTDEMESAKSELKTVEKK--GKESNVIGSKFRWSVFSAKTRF-ECDIAKSELEIFLS 142
+ + E ++ LK ++ GKES ++ ++ K + D+ + +I
Sbjct: 967 MSVLQNTYEKSQDNLKQLQSDFYGKESELLATRQDLKSVEEKLSLAQEDLISNRNQI--G 1024
Query: 143 TQSKETKKLADLEANLE----KVQTTLTER-KTLCEELTTRVPAMESEIAESRARLADLT 197
Q+K ++L +A LE K + L E+ KTL +++ E E+A +++LA++
Sbjct: 1025 NQNKLIQELKTAKAALEQDSAKKEQQLKEQCKTL-QDIQKEKSLKEKELANEKSKLAEIE 1083
Query: 198 REEAKLLDQVEKLAREV-SEKRESMQ--TSRSNNRLIDFVMQLKSENRV 243
+ + ++ KL+ E S K+ES++ T+ + + + +L+ + RV
Sbjct: 1084 EIKCRQEKEIAKLSEEFKSHKQESIKEVTNLKDAKQLLIQQKLELQGRV 1132
Score = 123 (48.4 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 62/248 (25%), Positives = 119/248 (47%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELR-KAVNFLELENCVQRKHNEIYQYERYVNMKN- 64
K EE +E T+ Q ++ + K L+ + K + L+L++ V + H+++ + ER + +
Sbjct: 329 KLKEELSEVETKYQHLKAEFKQLQQQREEKDQHGLQLQSEVNQLHSKLLETERQLGEAHG 388
Query: 65 -LGEHET----KVQQMEQE---LTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSK 116
L E K+ EQ+ L L +++ E + +EL+ K K+ +
Sbjct: 389 RLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKMKQQHQEQQA 448
Query: 117 FRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELT 176
+ S +AK R E A+++LE L + +K+ +LEA L+K + ++ + E+L
Sbjct: 449 LQQST-TAKLR-E---AQNDLEQVLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLY 503
Query: 177 TRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQ 236
++ A E E A L L + L +QV +L ++ + ES + ++ N L D V +
Sbjct: 504 AKIQAGEGETAV----LNQLQEKNHNLQEQVTQLTEKLKNQSESHKQAQEN--LHDQVQE 557
Query: 237 LKSENRVS 244
K+ R +
Sbjct: 558 QKAHLRAA 565
Score = 60 (26.2 bits), Expect = 6.3e-05, Sum P(2) = 6.3e-05
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
K T + K+ +KEK LA+ +++L + + K E ++ E K KQE +
Sbjct: 1052 KEQCKTLQDIQKEKSLKEKELANEKSKLAEIEEIKCRQEKEIAKLSEEFKSHKQESIKEV 1111
Query: 525 IDVKSPK 531
++K K
Sbjct: 1112 TNLKDAK 1118
Score = 52 (23.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 475 VKDL-EVKEKRLASLETELRILSQQKMEVETQL 506
+K L E K+K++ +L+ E++ QK E+E++L
Sbjct: 917 LKQLTEQKKKQIEALQGEVKTAISQKTELESKL 949
Score = 52 (23.4 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
T L K LE++++ ++S + +L+ S+ ++ L E K K+E + D K
Sbjct: 721 TELSKQLEMEKEIVSSTKLDLQKKSEALENIKQMLTEQEEEKKLLKREIENLSQDAK 777
>UNIPROTKB|E2RJD1 [details] [associations]
symbol:MYH7 "Myosin-7" species:9615 "Canis lupus
familiaris" [GO:0030016 "myofibril" evidence=IEA] [GO:0014823
"response to activity" evidence=IEA] [GO:0006936 "muscle
contraction" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0016459
"myosin complex" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0051015 "actin filament binding" evidence=IEA]
[GO:0003774 "motor activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0014823 GO:GO:0030016 GO:GO:0006936
GO:GO:0003774 GO:GO:0016459 SUPFAM:SSF50084
GeneTree:ENSGT00680000099788 OMA:EQTPGKG EMBL:AAEX03005612
Ensembl:ENSCAFT00000027883 Uniprot:E2RJD1
Length = 1791
Score = 129 (50.5 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 69/360 (19%), Positives = 155/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 812 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 871
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 872 VN--TLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQ 929
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + S+ KKL +L+A +E+++ L +T ++
Sbjct: 930 QLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKVEK 989
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E RL + + ++ +K E + R ++ + + ++
Sbjct: 990 LRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRK 1049
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + E +I A + N+ ++
Sbjct: 1050 KHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNM----EQIIKA--KANLEKM 1103
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + R+ ++ ++Q E L+ +E L++Q L + K
Sbjct: 1104 CRTLEDQMNEHRSKAEETQRSVNDLTS--QRAKLQTENGELSRQLDEKEALISQ-LTRGK 1160
Score = 56 (24.8 bits), Expect = 6.7e-05, Sum P(2) = 6.7e-05
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1652 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1711
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1712 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1757
Score = 53 (23.7 bits), Expect = 0.00014, Sum P(2) = 0.00014
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1665 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1709
>UNIPROTKB|F1PZD3 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0046872 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769 GO:GO:0006906
OMA:LKEQCKT GO:GO:0005969 GeneTree:ENSGT00700000104373
EMBL:AAEX03009934 EMBL:AAEX03009935 Ensembl:ENSCAFT00000009971
Uniprot:F1PZD3
Length = 1411
Score = 131 (51.2 bits), Expect = 0.00012, P = 0.00012
Identities = 57/229 (24%), Positives = 110/229 (48%)
Query: 30 EPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQME----QELTANLES 85
E +L+ +N L+ ++K E Q E + E E+K+QQ QELTA E
Sbjct: 954 EQQLQGTINELKQLTEQKKKQIEALQGEVKTAISQKTELESKLQQQSTQAAQELTAEKEK 1013
Query: 86 IKKCTDEMESAKSELKTVEKK--GKESNVIGSKFRWSVFSAKTRF-ECDIAKSELEIFLS 142
+ + E ++ LK ++ GKES ++ ++ K + D+ + +I
Sbjct: 1014 MSVLQNTYEKSQDNLKQLQSDFYGKESELLATRQDLKSVEEKLSLAQEDLISNRNQI--G 1071
Query: 143 TQSKETKKLADLEANLE----KVQTTLTER-KTLCEELTTRVPAMESEIAESRARLADLT 197
Q+K ++L +A LE K + L E+ KTL +++ E E+A +++LA++
Sbjct: 1072 NQNKLIQELKTAKAALEQDSAKKEQQLKEQCKTL-QDIQKEKSLKEKELANEKSKLAEIE 1130
Query: 198 REEAKLLDQVEKLAREV-SEKRESMQ--TSRSNNRLIDFVMQLKSENRV 243
+ + ++ KL+ E S K+ES++ T+ + + + +L+ + RV
Sbjct: 1131 EIKCRQEKEIAKLSEEFKSHKQESIKEVTNLKDAKQLLIQQKLELQGRV 1179
Score = 123 (48.4 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 62/248 (25%), Positives = 119/248 (47%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELR-KAVNFLELENCVQRKHNEIYQYERYVNMKN- 64
K EE +E T+ Q ++ + K L+ + K + L+L++ V + H+++ + ER + +
Sbjct: 376 KLKEELSEVETKYQHLKAEFKQLQQQREEKDQHGLQLQSEVNQLHSKLLETERQLGEAHG 435
Query: 65 -LGEHET----KVQQMEQE---LTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSK 116
L E K+ EQ+ L L +++ E + +EL+ K K+ +
Sbjct: 436 RLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKMKQQHQEQQA 495
Query: 117 FRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELT 176
+ S +AK R E A+++LE L + +K+ +LEA L+K + ++ + E+L
Sbjct: 496 LQQST-TAKLR-E---AQNDLEQVLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLY 550
Query: 177 TRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQ 236
++ A E E A L L + L +QV +L ++ + ES + ++ N L D V +
Sbjct: 551 AKIQAGEGETAV----LNQLQEKNHNLQEQVTQLTEKLKNQSESHKQAQEN--LHDQVQE 604
Query: 237 LKSENRVS 244
K+ R +
Sbjct: 605 QKAHLRAA 612
Score = 60 (26.2 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
K T + K+ +KEK LA+ +++L + + K E ++ E K KQE +
Sbjct: 1099 KEQCKTLQDIQKEKSLKEKELANEKSKLAEIEEIKCRQEKEIAKLSEEFKSHKQESIKEV 1158
Query: 525 IDVKSPK 531
++K K
Sbjct: 1159 TNLKDAK 1165
Score = 52 (23.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 12/33 (36%), Positives = 23/33 (69%)
Query: 475 VKDL-EVKEKRLASLETELRILSQQKMEVETQL 506
+K L E K+K++ +L+ E++ QK E+E++L
Sbjct: 964 LKQLTEQKKKQIEALQGEVKTAISQKTELESKL 996
Score = 52 (23.4 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 15/57 (26%), Positives = 29/57 (50%)
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
T L K LE++++ ++S + +L+ S+ ++ L E K K+E + D K
Sbjct: 768 TELSKQLEMEKEIVSSTKLDLQKKSEALENIKQMLTEQEEEKKLLKREIENLSQDAK 824
>UNIPROTKB|J9JHU7 [details] [associations]
symbol:CENPE "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005874 "microtubule" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0003777 "microtubule motor
activity" evidence=IEA] InterPro:IPR001752 InterPro:IPR019821
Pfam:PF00225 PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067
SMART:SM00129 GO:GO:0005524 GO:GO:0005875 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
GeneTree:ENSGT00680000099922 EMBL:AAEX03016796 EMBL:AAEX03016797
Ensembl:ENSCAFT00000043119 Uniprot:J9JHU7
Length = 2663
Score = 139 (54.0 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 62/248 (25%), Positives = 128/248 (51%)
Query: 7 KYDEERTEKLTRVQLVE--TDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKN 64
K EE +KL RV L E T+L +L+ EL N EL Q+K E+++ +++++ K
Sbjct: 1422 KEQEETIDKL-RVNLSERETELSSLQKELEITNN--EL----QKKIQELHEKQQFMSTKE 1474
Query: 65 LGEHETKVQQMEQ---ELTA------NLESIK-KCTDEMESAKSELKTVEKKGKESNVIG 114
+ E + K+ ++EQ +L N+ES K K T++++ ++ ++K V K+ E +
Sbjct: 1475 ITETQEKMSELEQLKEQLRVKDSSLQNIESEKLKLTEKLQESQDKIKIVIKERDELKRVQ 1534
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKV-QTTLTERKTLCE 173
+ K + +I E + +ST++ K D EAN+E+V +++ E + +
Sbjct: 1535 ELLQMERDQLKANIK-EIVAEEYQQTISTRN--ISKKTDQEANIERVIESSDAESQEKIQ 1591
Query: 174 ELTTRVPAM--ESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLI 231
EL + + ++E++ ++ ++ E K +Q E A++ + + M+ +R RL
Sbjct: 1592 ELQEKEHQLLKMKTVSETQEKICEM--EHLK--NQFE--AQKSTLENIEMENARLTQRLH 1645
Query: 232 DFVMQLKS 239
+ + +++S
Sbjct: 1646 ENLEEMRS 1653
Score = 49 (22.3 bits), Expect = 6.9e-05, Sum P(2) = 6.9e-05
Identities = 13/39 (33%), Positives = 20/39 (51%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNE 512
L + L+ + L S+ETE LSQ+ E ++ C E
Sbjct: 1766 LKEQLQAQHSTLESVETERLRLSQKLHENLEEIKCVTEE 1804
Score = 45 (20.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/45 (24%), Positives = 25/45 (55%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+++L+ KE +L ++ +LR Q +++ QL + L+ + E
Sbjct: 1739 IQELQEKEHQLLKVKNDLRENMYQTEQLKEQLQAQHSTLESVETE 1783
Score = 45 (20.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 14/51 (27%), Positives = 28/51 (54%)
Query: 469 STDTSLVKDLEVK-EKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
ST ++K ++ EK ++ L+ + L +QK E+ + + NE+K K+
Sbjct: 2501 STKALILKSGYIRLEKEISKLKQQNEQLIKQKNELLSNNHHLSNEVKTWKE 2551
Score = 40 (19.1 bits), Expect = 0.00057, Sum P(2) = 0.00057
Identities = 13/62 (20%), Positives = 26/62 (41%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
K VS ++E +K+L L + + + + +L+ E+K QE D
Sbjct: 1900 KEDVSETQKKTSEIERLKKQLKGQSLTLDKIEMENLNLAQKLHENLEEMKSVMQERDNLK 1959
Query: 525 ID 526
++
Sbjct: 1960 LE 1961
Score = 39 (18.8 bits), Expect = 0.00072, Sum P(2) = 0.00072
Identities = 8/38 (21%), Positives = 22/38 (57%)
Query: 481 KEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
KE ++ ++ EL + + ++++Q+N + L+ K+
Sbjct: 2362 KENKIVKMQKELEMTNDIIAKLQSQVNESNKCLEKTKE 2399
>UNIPROTKB|E1BFF9 [details] [associations]
symbol:GOLGA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005802 "trans-Golgi network" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0000042 "protein targeting to Golgi"
evidence=IEA] InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913
SMART:SM00755 GO:GO:0005794 GO:GO:0048471 GO:GO:0005802
GO:GO:0000042 Gene3D:1.10.220.60 CTD:2800 OMA:EKPGPEM
GeneTree:ENSGT00530000064371 EMBL:DAAA02032113 IPI:IPI00699911
RefSeq:NP_001179883.1 UniGene:Bt.38941 PRIDE:E1BFF9
Ensembl:ENSBTAT00000020327 GeneID:511191 KEGG:bta:511191
NextBio:20869812 Uniprot:E1BFF9
Length = 766
Score = 114 (45.2 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 55/232 (23%), Positives = 110/232 (47%)
Query: 6 GKYDEE---RTEKLTRVQ--LVET-----DLKALEPELRKAVNFLELENCVQRKHNEIYQ 55
GK ++E RT +L+R Q LV + DL EL++ + LE QR H +
Sbjct: 196 GKMEQELEARTRELSRTQEELVTSSQISLDLSQKLEELQRHYSALE----EQRDHVTASK 251
Query: 56 YERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELK----TVEKKGKESN 111
+ L + E ++Q Q+L+ +L+ + T E E + L+ ++EK+ E N
Sbjct: 252 TGAENKITVLEQKEQELQAFIQQLSIDLQKVTAETQEKEKLITHLQEKVASLEKR-LEQN 310
Query: 112 VIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL 171
+ G + + KT E ++ + ++ L+ +S + K + +LE +++++ +L +
Sbjct: 311 LSGEEHVQELLKEKTLAEQNLEDTRQQL-LAARSSQAKAINNLETRVKELEQSLQASEEE 369
Query: 172 CEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQT 223
+ V A E++I E LA E ++ Q L ++ +E+ +++T
Sbjct: 370 LKRSGDVVAAREAQIRE----LAAANTESSRAQQQALALEQQQAERIHALET 417
Score = 63 (27.2 bits), Expect = 7.5e-05, Sum P(2) = 7.5e-05
Identities = 18/46 (39%), Positives = 22/46 (47%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEY 520
V DL E+ L LE E L + K E E L ELK K+E+
Sbjct: 427 VADLTATEQELRKLEQENAALKESKNECECSLQHHQLELKKLKEEW 472
>UNIPROTKB|F1ME99 [details] [associations]
symbol:CEP135 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0010457 "centriole-centriole cohesion" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007099
"centriole replication" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR026732 GO:GO:0005814 GO:GO:0007099
OMA:DKEFHSH GO:GO:0010457 PANTHER:PTHR23159:SF3
GeneTree:ENSGT00530000063949 EMBL:DAAA02017737 EMBL:DAAA02017738
IPI:IPI00705420 UniGene:Bt.43589 Ensembl:ENSBTAT00000012468
NextBio:20868983 Uniprot:F1ME99
Length = 1139
Score = 134 (52.2 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 61/250 (24%), Positives = 117/250 (46%)
Query: 4 LYGKYDEERT-EKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNM 62
++GK + E+T E LT V L+ + EL+ + F+ E + +Q ++ ++
Sbjct: 600 VFGKSELEKTIEHLT---CVNHQLENEKCELKSKI-FIMKETMESLEKKAKFQAQKLSHV 655
Query: 63 KNLGEHE-TKVQQME---QELTANLES----IKKCTDEMESAKSELKTVEKK-GKESNVI 113
H+ T++ + ++L +LE + E+ESA++++K +E+K GK +
Sbjct: 656 AGDSSHQKTEMNSLRLVNEQLQRSLEDYQHRLNMKRSELESAQAQVKILEEKIGKLHLRM 715
Query: 114 GSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCE 173
S+ + KT + E +I T ++T+K+A+L NL + T+T+ K
Sbjct: 716 TSQNEEAHVMKKT---IGVIDKEKDILQETVDEKTEKIANLHENLASKEKTITQMKITVS 772
Query: 174 ELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTS-RSNNRLID 232
E ES + + L + RE + L Q++ +E+ E S + S + N RL D
Sbjct: 773 EY-------ESSLNHLKETLINRDREISSLRRQLDAAHKELDEVGRSKEMSFKENRRLQD 825
Query: 233 FVMQLKSENR 242
+ + EN+
Sbjct: 826 DLATMARENQ 835
Score = 46 (21.3 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 23/74 (31%), Positives = 35/74 (47%)
Query: 461 LMGRKATVSTDTSLVKDLEVKE--KRLASLE--TELRILSQQKMEVETQLNCTGNE---L 513
L+ + T+ SL+ KE L S E TE++IL ++ E++LN E L
Sbjct: 1023 LLSERHTIKNLESLLATNRDKEFHSHLTSHEKDTEIQILKEKLTLSESKLNSQSRENTML 1082
Query: 514 KYKKQEYDTCLIDV 527
+ K + T L DV
Sbjct: 1083 RAKMAQLQTDL-DV 1095
Score = 38 (18.4 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 10/40 (25%), Positives = 22/40 (55%)
Query: 461 LMGRKATVSTD--TSLVKDLEVKEKRLASLETELRILSQQ 498
++ K T+S S ++ + ++A L+T+L +L +Q
Sbjct: 1060 ILKEKLTLSESKLNSQSRENTMLRAKMAQLQTDLDVLKRQ 1099
>UNIPROTKB|E1BP87 [details] [associations]
symbol:MYH4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0030016 "myofibril" evidence=IEA] [GO:0014823 "response
to activity" evidence=IEA] [GO:0006936 "muscle contraction"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0016459 "myosin complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 GO:GO:0005524 GO:GO:0014823 GO:GO:0030016
GO:GO:0006936 GO:GO:0003774 GO:GO:0016459 InterPro:IPR015650
PANTHER:PTHR13140:SF22 GeneTree:ENSGT00680000099790 OMA:NTQGMLK
EMBL:DAAA02048847 IPI:IPI00721587 Ensembl:ENSBTAT00000061014
Uniprot:E1BP87
Length = 1939
Score = 133 (51.9 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 50/220 (22%), Positives = 108/220 (49%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 961 LELTLAKVEKEKHATENKVKNLTEEMAGLDENIAKLTKEKKALQEAHQQTLDDLQAEEDK 1020
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + +TK++Q ++L +LE KK ++E AK +L+ K +ES +
Sbjct: 1021 VN--TLTKSKTKLEQQVEDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTM------- 1071
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + + + K E E+ + QSK + D +A ++Q + E + EEL +
Sbjct: 1072 DIENDKQQLDEKLKKKEFEMS-NLQSK----IEDEQALAMQLQKKIKELQARIEELEEEI 1126
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
A + A++ + +DL+RE ++ +++E+ S + E
Sbjct: 1127 EAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE 1166
Score = 52 (23.4 bits), Expect = 7.6e-05, Sum P(2) = 7.6e-05
Identities = 22/108 (20%), Positives = 48/108 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGG---GSNPIRGLMGRKATVSTDTSLVKD 477
L++A+++ GG ++ LE + E + + ++GL + V T ++
Sbjct: 1801 LDEAEQLALKGGKKQIQKLEARVRELENEVENEQKRNAEAVKGLRKHERRVKELTYQTEE 1860
Query: 478 LEVKEKRLASL----ETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
RL L +++++ +Q E E Q N N K++K +++
Sbjct: 1861 DRKNVLRLQDLVDKLQSKVKAYKRQAEEAEEQSNV--NLAKFRKLQHE 1906
Score = 47 (21.6 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 13/47 (27%), Positives = 22/47 (46%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K ++ E R+ LE E+ ++QK E +E + K+ Y T
Sbjct: 1814 KQIQKLEARVRELENEVE--NEQKRNAEAVKGLRKHERRVKELTYQT 1858
Score = 45 (20.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+LE +K SL TEL + E QL E K +QE
Sbjct: 1470 ELEASQKESRSLSTELFKVKNAYEESLDQLETLKRENKNLQQE 1512
Score = 45 (20.9 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 14/50 (28%), Positives = 26/50 (52%)
Query: 458 IRGLMGRKATVSTDTS-LVKDLEVKEKRLASLETELRILSQQKMEVETQL 506
I L +KA + T++ + LE K+ ++ L + +QQ E++ QL
Sbjct: 1274 INELSAQKAHLHTESGEFSRQLEEKDALVSQLSRGKQAFTQQIEELKRQL 1323
>DICTYBASE|DDB_G0284499 [details] [associations]
symbol:smc2 "structural maintenance of chromosome
protein" species:44689 "Dictyostelium discoideum" [GO:0051276
"chromosome organization" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA;ISS] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000796 "condensin complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0051301 "cell division" evidence=IEA]
[GO:0007067 "mitosis" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR024704
InterPro:IPR010935 InterPro:IPR027120 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
dictyBase:DDB_G0284499 Pfam:PF02463 GO:GO:0005524 GO:GO:0005634
GO:GO:0005694 GO:GO:0051301 GenomeReviews:CM000153_GR GO:GO:0006281
GO:GO:0006310 GO:GO:0007076 EMBL:AAFI02000066 GO:GO:0007062
eggNOG:COG1196 SUPFAM:SSF75553 KO:K06674 PANTHER:PTHR18937:SF9
HSSP:P32908 OMA:CQNGKIP RefSeq:XP_638528.1
ProteinModelPortal:Q54PK4 STRING:Q54PK4 PRIDE:Q54PK4
EnsemblProtists:DDB0219933 GeneID:8624621 KEGG:ddi:DDB_G0284499
ProtClustDB:CLSZ2430256 Uniprot:Q54PK4
Length = 1184
Score = 139 (54.0 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 77/390 (19%), Positives = 175/390 (44%)
Query: 12 RTEKLTRVQLVETDLKALEPELRK-AVNFLELENCVQRKHNEIYQYERYVN-MKNLGEH- 68
+ +L + + ET+L+ ++ + +K + ++ + + + + + E +N + N E
Sbjct: 278 KISELAKQREKETNLEEMDQQEQKLSKELVKYQTSHKHQKESLDKEEGAINNLANTREEI 337
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNV-IGSKFRWSVFSAKTR 127
+ +QQ ++E + + I+ +E + +ELKT++ K I + S +
Sbjct: 338 KQSIQQKQKEKQSMEKKIQSIVEENQQINAELKTLQNKHNTMTTGISTGADGSSAAEDGS 397
Query: 128 FECDIAKSE-LEIFLSTQSKETK-KLADLEANLEKVQTTLTERKTLCEELTTRVPAMESE 185
+ + +++ + +++ K+ + ++ L++ L + +T+ +T ++L +E E
Sbjct: 398 YTEQLMEAKKTAVNAASEYKQAEFRVKHLQSELIAKRKAITQEQTDHKKLQAEQELVERE 457
Query: 186 IAESRARLADLTREEAKLLDQVEK---LAREVSEKRESMQTSRSNNRLIDF--VMQLKSE 240
I + + +L + +K + EK L VS+ RE + + + ++F KS
Sbjct: 458 IQQLTRSIQELQLDNSKQQELTEKKRQLEPLVSKLREEVGNASAQLSGLEFNYTDPSKSF 517
Query: 241 NRVSXXXXXXXXXXXXXQKYDIAVST-ACGALNYIVTETVEAGEAVIAAVKRQNVGRVNV 299
+R + A+ A G L IV E E G+A+++ K Q RV +
Sbjct: 518 DRSKVKGIVANLITLKDVETATALEICASGKLYNIVIEDDETGKALLS--KGQLKRRVTL 575
Query: 300 IPLDKMQQYHSQCYDKYRTPENV-PR-----LIDLIQVQDEKIRLAFYFATRETLVAQDL 353
+PL+K++ S K + + + P I+ ++ D++++ A F T +A D
Sbjct: 576 LPLNKVEG-RSIDPQKIKNAQKIAPNGAVKPAIEFVEY-DKELQPAMNFVFGSTFIATDK 633
Query: 354 NQAKRIGYSGG-GYRMVTLEGAIIEPSETL 382
A++ + R ++LEG P+ +L
Sbjct: 634 KYAQKAAFDSSIKVRTISLEGDEYNPAGSL 663
Score = 41 (19.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 467 TVSTDTSLVKDLEVKEKRLASLETELRILSQ----QKMEVETQLNCTGNELKYKKQE 519
++ +DT L+ + +KEK +LE ++ SQ Q + E+QL +++ K++
Sbjct: 751 SIESDTQLITNSMIKEKE--ALEKVKQLESQVNDFQSIR-ESQLKDLEKKIQITKEK 804
Score = 40 (19.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 470 TDTSLVKDLEVKEKRLASLETELRILSQQKMEVE-TQLNCTGNELKYKKQEYD 521
T + + KD+ K + SL EL +K++ E T+++ + +LK + D
Sbjct: 874 TLSEIRKDMAQKNDAIRSLHQEL-----EKIQSEITEIDMSTEKLKSRMNRVD 921
>UNIPROTKB|P49824 [details] [associations]
symbol:MYH7 "Myosin-7" species:9615 "Canis lupus
familiaris" [GO:0030016 "myofibril" evidence=IEA] [GO:0032982
"myosin filament" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0003774 "motor
activity" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 GO:GO:0005524 GO:GO:0030016 GO:GO:0003774
eggNOG:COG5022 GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352
HOGENOM:HOG000173959 OrthoDB:EOG42JNQH CTD:4625 EMBL:DQ227285
RefSeq:NP_001107183.1 UniGene:Cfa.32681 ProteinModelPortal:P49824
SMR:P49824 STRING:P49824 UCD-2DPAGE:P49824 PRIDE:P49824
GeneID:403807 KEGG:cfa:403807 InParanoid:P49824 NextBio:20817303
Uniprot:P49824
Length = 1935
Score = 129 (50.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 69/360 (19%), Positives = 155/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 957 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 1016
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1017 VN--TLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQ 1074
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + S+ KKL +L+A +E+++ L +T ++
Sbjct: 1075 QLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKVEK 1134
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E RL + + ++ +K E + R ++ + + ++
Sbjct: 1135 LRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRK 1194
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + E +I A + N+ ++
Sbjct: 1195 KHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNM----EQIIKA--KANLEKM 1248
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + R+ ++ ++Q E L+ +E L++Q L + K
Sbjct: 1249 CRTLEDQMNEHRSKAEETQRSVNDLTS--QRAKLQTENGELSRQLDEKEALISQ-LTRGK 1305
Score = 56 (24.8 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1797 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1856
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1857 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1902
Score = 53 (23.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1810 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1854
>UNIPROTKB|P12883 [details] [associations]
symbol:MYH7 "Myosin-7" species:9606 "Homo sapiens"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0001725 "stress fiber" evidence=IEA] [GO:0030018 "Z disc"
evidence=IEA] [GO:0000146 "microfilament motor activity"
evidence=NAS] [GO:0005859 "muscle myosin complex" evidence=TAS]
[GO:0016459 "myosin complex" evidence=TAS] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0006936 "muscle contraction"
evidence=IDA;TAS] [GO:0030049 "muscle filament sliding"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0008307 "structural constituent of muscle" evidence=IDA]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IMP] [GO:0030898 "actin-dependent ATPase activity"
evidence=IMP] [GO:0002027 "regulation of heart rate" evidence=IDA]
[GO:0006200 "ATP catabolic process" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0030017 "sarcomere"
evidence=TAS] [GO:0032982 "myosin filament" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005925
"focal adhesion" evidence=IDA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0030018 GO:GO:0005730 GO:GO:0030017 Orphanet:155
GO:GO:0005925 GO:GO:0000302 Orphanet:154 EMBL:CH471078
GO:GO:0000146 GO:GO:0001725 Orphanet:54260 GO:GO:0030049
GO:GO:0008307 GO:GO:0007512 GO:GO:0002027 eggNOG:COG5022
GO:GO:0055010 MIM:192600 Orphanet:85146 GO:GO:0005859 GO:GO:0030898
GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352 PDB:3DTP PDBsum:3DTP
HPA:HPA001349 HPA:HPA001239 OrthoDB:EOG42JNQH CTD:4625 EMBL:M57965
EMBL:M58018 EMBL:X52889 EMBL:AJ238393 EMBL:EU747717 EMBL:EF179180
EMBL:BC112171 EMBL:BC112173 EMBL:M25135 EMBL:M25133 EMBL:M25134
EMBL:M27636 EMBL:X04627 EMBL:X04628 EMBL:X04629 EMBL:X04630
EMBL:X04631 EMBL:X04632 EMBL:X04633 EMBL:X51591 EMBL:X03741
EMBL:X06976 EMBL:M17712 EMBL:M21665 EMBL:X05631 IPI:IPI00025880
PIR:A37102 RefSeq:NP_000248.2 UniGene:Hs.719946 PDB:1IK2 PDB:2FXM
PDB:2FXO PDB:4DB1 PDBsum:1IK2 PDBsum:2FXM PDBsum:2FXO PDBsum:4DB1
ProteinModelPortal:P12883 SMR:P12883 IntAct:P12883 STRING:P12883
PhosphoSite:P12883 DMDM:83304912 UCD-2DPAGE:P12883
UCD-2DPAGE:Q92679 PaxDb:P12883 PRIDE:P12883 Ensembl:ENST00000355349
GeneID:4625 KEGG:hsa:4625 UCSC:uc001wjx.3 GeneCards:GC14M023881
H-InvDB:HIX0172409 HGNC:HGNC:7577 HPA:CAB015384 MIM:160500
MIM:160760 MIM:181430 MIM:608358 MIM:613426 neXtProt:NX_P12883
Orphanet:53698 Orphanet:59135 PharmGKB:PA31374 ChiTaRS:MYH7
EvolutionaryTrace:P12883 GenomeRNAi:4625 NextBio:17802
ArrayExpress:P12883 Bgee:P12883 Genevestigator:P12883
GermOnline:ENSG00000092054 Uniprot:P12883
Length = 1935
Score = 129 (50.5 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 69/360 (19%), Positives = 155/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 957 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 1016
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1017 VN--TLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQ 1074
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + S+ KKL +L+A +E+++ L +T ++
Sbjct: 1075 QLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKVEK 1134
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E RL + + ++ +K E + R ++ + + ++
Sbjct: 1135 LRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRK 1194
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + E +I A + N+ ++
Sbjct: 1195 KHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNM----EQIIKA--KANLEKM 1248
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + R+ ++ ++Q E L+ +E L++Q L + K
Sbjct: 1249 CRTLEDQMNEHRSKAEETQRSVNDLTS--QRAKLQTENGELSRQLDEKEALISQ-LTRGK 1305
Score = 56 (24.8 bits), Expect = 7.9e-05, Sum P(2) = 7.9e-05
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1797 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1856
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1857 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1902
Score = 53 (23.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1810 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1854
>UNIPROTKB|F1N037 [details] [associations]
symbol:CALCOCO1 "Calcium-binding and coiled-coil
domain-containing protein 1" species:9913 "Bos taurus" [GO:0070016
"armadillo repeat domain binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0030518 "intracellular steroid
hormone receptor signaling pathway" evidence=IEA] [GO:0030374
"ligand-dependent nuclear receptor transcription coactivator
activity" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] GO:GO:0005737 GO:GO:0043565 GO:GO:0045944
GO:GO:0006351 GO:GO:0003682 GO:GO:0044212 GO:GO:0000790
GO:GO:0030374 IPI:IPI00696240 UniGene:Bt.28477 InterPro:IPR012852
Pfam:PF07888 GeneTree:ENSGT00530000063216 OMA:YDMASGF GO:GO:0030518
EMBL:DAAA02012850 EMBL:DAAA02012851 Ensembl:ENSBTAT00000019992
Uniprot:F1N037
Length = 680
Score = 123 (48.4 bits), Expect = 8.1e-05, Sum P(2) = 8.0e-05
Identities = 55/261 (21%), Positives = 120/261 (45%)
Query: 3 VLYGKYDEERTEKLTRVQL---VE---TDLKALEPELRKAVNFLELENC--------VQR 48
VL + DE + E+ +QL +E T+LK+ EL KA+ E+ + R
Sbjct: 148 VLQNQLDESQQERNDLMQLKLQLEGQVTELKSQVQELEKALAAARQEHAELAEQYKGLSR 207
Query: 49 KHNEIYQYERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK 108
H E+ + ER + + G+H ++ ++E+++ E + E++ + +K + ++
Sbjct: 208 SHGELTE-ERDILSRQQGDHVARILELEEDIQTISEKVLMKEVELDRVRDSVKALTRE-- 264
Query: 109 ESNVIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETK-KLADLEANLEKVQTTLTE 167
+ ++G ++ E +A+ E L+ + +E K + + A ++++ + +
Sbjct: 265 QEKLLGQLKEVQADKEQSEAELQMAQQENRR-LNLELQEAKDRQEEQSAQAQRLKDKVAQ 323
Query: 168 RKTLCEELTTRVPAME--SEIAESRARLADLTREEAKLL-DQVEKLA----REVSE-KRE 219
K ++ RV +E E LA ++++A LL +++ A R ++E R
Sbjct: 324 MKDTLGQVQQRVAELEPLKEQLRGAQELAASSQQKAALLGEELASAAGARDRTIAELHRS 383
Query: 220 SMQTSRSNNRLIDFVMQLKSE 240
++ + N RL + + LK E
Sbjct: 384 RLEVAGVNGRLAELSLHLKEE 404
Score = 52 (23.4 bits), Expect = 8.1e-05, Sum P(2) = 8.0e-05
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
D+SLV+ L ++ L L + LR+L ++K +++ +
Sbjct: 459 DSSLVQ-LSESKRELTELRSALRVLQKEKEQLQEE 492
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
L++ +E ++ ++ L E+ L + E +TQ EL +K D+ L+ + K
Sbjct: 415 LLQSVEAEKDKILKLSAEILRLEKAVQEEKTQSQVFKTELAREK---DSSLVQLSESK 469
>UNIPROTKB|Q2KJ21 [details] [associations]
symbol:CALCOCO1 "Calcium-binding and coiled-coil
domain-containing protein 1" species:9913 "Bos taurus" [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
GO:GO:0005634 GO:GO:0005737 GO:GO:0016055 EMBL:BC105562
IPI:IPI00696240 RefSeq:NP_001039900.1 UniGene:Bt.28477
ProteinModelPortal:Q2KJ21 PRIDE:Q2KJ21 GeneID:538675
KEGG:bta:538675 CTD:57658 eggNOG:NOG114876 HOGENOM:HOG000111283
HOVERGEN:HBG107573 InParanoid:Q2KJ21 OrthoDB:EOG4NZTTD
NextBio:20877513 InterPro:IPR012852 Pfam:PF07888 Uniprot:Q2KJ21
Length = 680
Score = 123 (48.4 bits), Expect = 8.1e-05, Sum P(2) = 8.0e-05
Identities = 55/261 (21%), Positives = 120/261 (45%)
Query: 3 VLYGKYDEERTEKLTRVQL---VE---TDLKALEPELRKAVNFLELENC--------VQR 48
VL + DE + E+ +QL +E T+LK+ EL KA+ E+ + R
Sbjct: 148 VLQNQLDESQQERNDLMQLKLQLEGQVTELKSQVQELEKALAAARQEHAELAEQYKGLSR 207
Query: 49 KHNEIYQYERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGK 108
H E+ + ER + + G+H ++ ++E+++ E + E++ + +K + ++
Sbjct: 208 SHGELTE-ERDILSRQQGDHVARILELEEDIQTISEKVLMKEVELDRVRDSVKALTRE-- 264
Query: 109 ESNVIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETK-KLADLEANLEKVQTTLTE 167
+ ++G ++ E +A+ E L+ + +E K + + A ++++ + +
Sbjct: 265 QEKLLGQLKEVQADKEQSEAELQMAQQENRR-LNLELQEAKDRQEEQSAQAQRLKDKVAQ 323
Query: 168 RKTLCEELTTRVPAME--SEIAESRARLADLTREEAKLL-DQVEKLA----REVSE-KRE 219
K ++ RV +E E LA ++++A LL +++ A R ++E R
Sbjct: 324 MKDTLGQVQQRVAELEPLKEQLRGAQELAASSQQKAALLGEELASAAGARDRTIAELHRS 383
Query: 220 SMQTSRSNNRLIDFVMQLKSE 240
++ + N RL + + LK E
Sbjct: 384 RLEVAGVNGRLAELSLHLKEE 404
Score = 52 (23.4 bits), Expect = 8.1e-05, Sum P(2) = 8.0e-05
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
D+SLV+ L ++ L L + LR+L ++K +++ +
Sbjct: 459 DSSLVQ-LSESKRELTELRSALRVLQKEKEQLQEE 492
Score = 48 (22.0 bits), Expect = 0.00021, Sum P(2) = 0.00021
Identities = 14/58 (24%), Positives = 28/58 (48%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
L++ +E ++ ++ L E+ L + E +TQ EL +K D+ L+ + K
Sbjct: 415 LLQSVEAEKDKILKLSAEILRLEKAVQEEKTQSQVFKTELAREK---DSSLVQLSESK 469
>UNIPROTKB|F1SQ11 [details] [associations]
symbol:EEA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
evidence=IEA] [GO:0006906 "vesicle fusion" evidence=IEA]
[GO:0006897 "endocytosis" evidence=IEA] [GO:0005969
"serine-pyruvate aminotransferase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005769 "early endosome"
evidence=IEA] [GO:0005545 "1-phosphatidylinositol binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0046872 GO:GO:0005545
GO:GO:0008270 GO:GO:0006897 GO:GO:0019897 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 GO:GO:0005769 GO:GO:0006906
OMA:LKEQCKT GO:GO:0005969 GeneTree:ENSGT00700000104373
EMBL:CU457729 EMBL:FP102822 Ensembl:ENSSSCT00000000996
Uniprot:F1SQ11
Length = 1411
Score = 125 (49.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 105/537 (19%), Positives = 231/537 (43%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELR-KAVNFLELENCVQRKHNEIYQYERYVNMKN- 64
K EE +E T+ Q ++ + K L+ + K + L+L++ + + H+++ + ER + +
Sbjct: 376 KLKEELSEVETKHQHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKLLETERQLGEAHG 435
Query: 65 -LGEHET----KVQQMEQELTANLE-SIKKCTDEMES--AKS-ELKTVEKKGKESNVIGS 115
L E K+ EQ++ A+L+ + + +E++ A S EL+ K K+ +
Sbjct: 436 RLKEQRQLSSEKLMDKEQQV-ADLQLKLSRLEEELKEKVANSTELQHQLDKTKQQHQEQQ 494
Query: 116 KFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEEL 175
+ S +AK R E A+++LE L + +K+ +LEA L+K + ++ + E+L
Sbjct: 495 ALQQST-TAKLR-E---AQNDLEQVLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDL 549
Query: 176 TTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVM 235
++ A E E A L L + L +QV +L ++ + ES + ++ N L D V
Sbjct: 550 YAKIQAGEGETAV----LNQLQEKNHILQEQVTQLTEKLKNQSESHKQAQEN--LHDQVQ 603
Query: 236 QLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVG 295
+ K+ R + + S ++ + + E +++A +
Sbjct: 604 EQKAHLRAAQDRVLSLEASISELSSQLNESKE--KVSQLDIQIKAKTELLLSAEAAKTAQ 661
Query: 296 RVNVIP-LDKMQQYHSQCYDKYRTPENVPRLIDLI--QVQDEKIRLAFYFATRETLVAQD 352
R ++ LD Q + DK + + +D + ++QD++ + + +
Sbjct: 662 RADLQNHLDTAQ---NALQDKQQELNKITTQLDQVTTKLQDKQEHCGQLESHLKEYKEKH 718
Query: 353 LNQAKRIGYSGGGYRMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEP 412
L+ ++ G + + + ++ S+ QDL Q +++ + R L +
Sbjct: 719 LSLEQKTEELEGQIKKLEADSLEVKASKEQALQDLQQQRQLN-TDLELRATELSKQLEME 777
Query: 413 SETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGL-MGRKATVSTD 471
ET+ + L+ K+ +M+T + E + N + M +K +
Sbjct: 778 KETVSSTKLDLQKKSEALENIKQMLTKQE---EEKKILKQEVENLSQNAKMQQKELNNKI 834
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
+ V +L+ + +L TEL ++ +V L + +E + + Q+ ++D++
Sbjct: 835 QAAVTELQKVKMEKETLVTELSAAKEKLSKVSDSLKNSKSEFEKESQKGKAAILDLE 891
Score = 57 (25.1 bits), Expect = 8.4e-05, Sum P(2) = 8.4e-05
Identities = 14/44 (31%), Positives = 24/44 (54%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
K+ +KEK L + +++L + + K E ++ ELK KQE
Sbjct: 1110 KEKSLKEKELVNEKSKLAEIEEIKCRQEKEIAKLSEELKSHKQE 1153
Score = 56 (24.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 13/33 (39%), Positives = 23/33 (69%)
Query: 475 VKDL-EVKEKRLASLETELRILSQQKMEVETQL 506
+K L E K+K++ +L+ E++I QK E+E +L
Sbjct: 964 LKQLTEQKKKQIEALQGEVKIAVSQKTELENKL 996
>UNIPROTKB|P35748 [details] [associations]
symbol:MYH11 "Myosin-11" species:9986 "Oryctolagus
cuniculus" [GO:0006939 "smooth muscle contraction" evidence=IDA]
[GO:0008307 "structural constituent of muscle" evidence=ISS]
[GO:0030241 "skeletal muscle myosin thick filament assembly"
evidence=IDA] [GO:0048251 "elastic fiber assembly" evidence=ISS]
[GO:0048739 "cardiac muscle fiber development" evidence=ISS]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0042470 GO:GO:0030016 GO:GO:0006939
GO:GO:0008307 GO:GO:0003774 eggNOG:COG5022 GO:GO:0048251
GO:GO:0030241 GO:GO:0048739 GO:GO:0032982 HOGENOM:HOG000173958
HOVERGEN:HBG004704 CTD:4629 EMBL:M77812 RefSeq:NP_001075777.1
UniGene:Ocu.1925 ProteinModelPortal:P35748 SMR:P35748 STRING:P35748
PRIDE:P35748 GeneID:100009145 Uniprot:P35748
Length = 1972
Score = 125 (49.1 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 46/223 (20%), Positives = 104/223 (46%)
Query: 13 TEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE--T 70
T + +Q E +L+ ++ +KA + EL+ +Q+KH ++ + + + + E E
Sbjct: 848 TRQEEEMQAKEDELQKIKERQQKAES--ELQE-LQQKHTQLSEEKNLLQEQLQAETELYA 904
Query: 71 KVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFEC 130
+ ++M L A + +++ EME+ L+ E +G++ K + + + E
Sbjct: 905 EAEEMRVRLAAKKQELEEILHEMEA---RLEEEEDRGQQLQAERKKMAQQMLDLEEQLEE 961
Query: 131 D-IAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAES 189
+ A+ +L++ T + KKL D ++ L++ + L EE R+ + + +AE
Sbjct: 962 EEAARQKLQLEKVTAEAKIKKLEDDILVMDDQNNKLSKERKLLEE---RISDLTTNLAEE 1018
Query: 190 RARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
+ +LT+ + K + +L + ++ +S Q R +D
Sbjct: 1019 EEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKRKMD 1061
Score = 125 (49.1 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 54/220 (24%), Positives = 107/220 (48%)
Query: 12 RTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHN-EIYQYERYVNMKNLGEHET 70
+ EK R L E +L+AL+ EL ++ + ++ K E+ ++ ++ + HE
Sbjct: 1136 KAEKQKR-DLGE-ELEALKTELEDTLDTTATQQELRAKREQEVTVLKKALD-EETRSHEA 1192
Query: 71 KVQQMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFSAKTRFE 129
+VQ+M Q+ T +E + + ++ + AK+ L KT + KE+ + + R V + + E
Sbjct: 1193 QVQEMRQKHTQVVEELTEQLEQFKRAKANLDKTKQTLEKENADLAGELR--VLG-QAKQE 1249
Query: 130 CDIAKSELEIFLST-QSKET---KKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESE 185
+ K +LE+ L QSK + + A+L + K+Q + + E + + E
Sbjct: 1250 VEHKKKKLEVQLQELQSKCSDGERARAELNDKVHKLQNEVESVTGMLSEAEGKAIKLAKE 1309
Query: 186 IAESRARLAD---LTREEAKLLDQVEKLAREVSEKRESMQ 222
+A ++L D L +EE + V R++ ++R S+Q
Sbjct: 1310 VASLGSQLQDTQELLQEETRQKLNVSTKLRQLEDERNSLQ 1349
Score = 60 (26.2 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVE 503
+L K + EK A L ELR+L Q K EVE
Sbjct: 1221 NLDKTKQTLEKENADLAGELRVLGQAKQEVE 1251
Score = 53 (23.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCT 509
VS+ + K++ EK +LET++ + Q E+E +L T
Sbjct: 1517 VSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQAT 1558
>MGI|MGI:102643 [details] [associations]
symbol:Myh11 "myosin, heavy polypeptide 11, smooth muscle"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IDA] [GO:0003774
"motor activity" evidence=IMP] [GO:0003779 "actin binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005859 "muscle myosin complex" evidence=IDA]
[GO:0006939 "smooth muscle contraction" evidence=IDA;IMP]
[GO:0008152 "metabolic process" evidence=IMP] [GO:0008307
"structural constituent of muscle" evidence=ISO] [GO:0016459
"myosin complex" evidence=IDA] [GO:0030485 "smooth muscle
contractile fiber" evidence=IDA] [GO:0032982 "myosin filament"
evidence=IEA] [GO:0048251 "elastic fiber assembly" evidence=ISO]
[GO:0048739 "cardiac muscle fiber development" evidence=ISO]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
MGI:MGI:102643 GO:GO:0005524 GO:GO:0042470 GO:GO:0030016
GO:GO:0006939 GO:GO:0001725 GO:GO:0030485 GO:GO:0008307
GO:GO:0003774 eggNOG:COG5022 GO:GO:0048251 GO:GO:0030241
GO:GO:0048739 GO:GO:0005859 GO:GO:0032982 HOGENOM:HOG000173958
HOVERGEN:HBG004704 OrthoDB:EOG4TXBR1 ChiTaRS:MYH11 EMBL:D85923
EMBL:D85924 EMBL:L25860 EMBL:S81516 IPI:IPI00114894 IPI:IPI00227865
PIR:I52863 PIR:JC5420 PIR:JC5421 UniGene:Mm.250705
ProteinModelPortal:O08638 SMR:O08638 IntAct:O08638 STRING:O08638
PhosphoSite:O08638 PaxDb:O08638 PRIDE:O08638 InParanoid:O08638
CleanEx:MM_MYH11 Genevestigator:O08638
GermOnline:ENSMUSG00000018830 Uniprot:O08638
Length = 1972
Score = 126 (49.4 bits), Expect = 0.00061, P = 0.00061
Identities = 64/295 (21%), Positives = 129/295 (43%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNFLELENCVQRK---HNEIYQYERYVNMKN 64
E + E++ T+++ E D++A E +LR VN L+ +R +E + +R +
Sbjct: 1538 ETQMEEMKTQLEESEDDVQATEDAKLRLEVNMQALKGQFERDLQARDEQNEEKRRQLQRQ 1597
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
L E+ET+++ ++ + KK +++ + + + K G+E + + R
Sbjct: 1598 LHEYETELEDERKQRALAAAAKKKLEGDLKDLELQADSAIK-GREEAI--KQLRKLQAQM 1654
Query: 125 KT-RFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
K + E D A++ + +T + KK LEA+L ++Q L + ++ +
Sbjct: 1655 KDFQRELDDARASRDEIFATSKENEKKAKSLEADLMQLQEDLAAAERARKQADLEKEELA 1714
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDF-VMQLKSE-- 240
E+A S + L E+ +L ++ +L E+ E++ +M+ R QL +E
Sbjct: 1715 EELASSLSGRNTLQDEKRRLEARIAQLEEELEEEQGNMEAMSDRVRKATLQAEQLSNELA 1774
Query: 241 -NRVSXXXXXXXXXXXXXQKYDIA--VSTACGALNYIVTETVEAGEAVIAAVKRQ 292
R + Q ++ + GA+ + TV A EA IA ++ Q
Sbjct: 1775 TERSTAQKNESARQQLERQNKELRSKLQEVEGAVKAKLKSTVAALEAKIAQLEEQ 1829
Score = 124 (48.7 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 59/247 (23%), Positives = 111/247 (44%)
Query: 10 EERTEKLT-RVQLVETDLKALEPELRKAVNFLELENCVQRK---HNEIYQYERYVNMKNL 65
EE +K+T R Q ET+LK LE +K E + +Q + E+Y + ++ L
Sbjct: 858 EEEMQKITERQQKAETELKELE---QKHTQLAEEKTLLQEQLQAETELYAESEEMRVR-L 913
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKT----VEKKGKESNVIGSKFRWSV 121
+ +++++ E+ A LE + ++++ + ++ +E++ +E K +
Sbjct: 914 AAKKQELEEILHEMEARLEEEEDRRQQLQAERKKMAQQMLDLEEQLEEEEAARQKLQLEK 973
Query: 122 FSAKTRFECDIAKSELEIFL--STQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+A E I K E +I + SK +K+ LE + + T L E + + LT
Sbjct: 974 VTA----EAKIKKLEDDILVMDDQNSKLSKERKLLEERVSDLTTNLAEEEEKAKNLTKLK 1029
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM--QTSRSNNRLIDFVMQL 237
ES I+E RL ++E K ++EKL R++ Q + ++ + MQL
Sbjct: 1030 SKHESMISELEVRL----KKEEKSRQELEKLKRKLEGDASDFHEQIADLQAQIAELKMQL 1085
Query: 238 -KSENRV 243
K E +
Sbjct: 1086 AKKEEEL 1092
Score = 61 (26.5 bits), Expect = 8.5e-05, Sum P(2) = 8.5e-05
Identities = 15/31 (48%), Positives = 18/31 (58%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVE 503
+L K + EK A L ELR+L Q K EVE
Sbjct: 1221 NLDKSKQTLEKENADLAGELRVLGQAKQEVE 1251
Score = 51 (23.0 bits), Expect = 0.00089, Sum P(2) = 0.00089
Identities = 18/57 (31%), Positives = 29/57 (50%)
Query: 478 LEVKEKRLASLETELRILSQQ---KMEVETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
+EV E+ L+ E+ LSQQ K +L T N L+ QE D ++D+ + +
Sbjct: 1387 IEVMEEGKKRLQKEMEGLSQQYEEKAAAYDKLEKTKNRLQ---QELDDLVVDLDNQR 1440
>UNIPROTKB|Q15075 [details] [associations]
symbol:EEA1 "Early endosome antigen 1" species:9606 "Homo
sapiens" [GO:0005969 "serine-pyruvate aminotransferase complex"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0031901 "early endosome membrane" evidence=IEA] [GO:0019897
"extrinsic to plasma membrane" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0045022 "early endosome to late endosome transport"
evidence=NAS] [GO:0030742 "GTP-dependent protein binding"
evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=TAS] [GO:0005545
"1-phosphatidylinositol binding" evidence=IDA] [GO:0005516
"calmodulin binding" evidence=NAS] [GO:0016189 "synaptic vesicle to
endosome fusion" evidence=TAS] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0006906 "vesicle
fusion" evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP]
[GO:0016020 "membrane" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR000306 InterPro:IPR007087 InterPro:IPR015880
Pfam:PF01363 PROSITE:PS00028 PROSITE:PS50157 SMART:SM00064
SMART:SM00355 GO:GO:0005829 GO:GO:0042803 GO:GO:0031901
GO:GO:0046872 GO:GO:0005545 GO:GO:0008270 GO:GO:0019897
GO:GO:0005516 Gene3D:3.30.40.10 InterPro:IPR017455
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
PROSITE:PS50178 eggNOG:NOG12793 GO:GO:0045022 GO:GO:0005769
GO:GO:0030742 GO:GO:0006906 EMBL:L40157 EMBL:X78998 EMBL:AC016136
EMBL:AC021646 EMBL:AC026111 IPI:IPI00329536 PIR:A57013
RefSeq:NP_003557.2 UniGene:Hs.567367 PDB:1HYI PDB:1HYJ PDB:1JOC
PDB:3MJH PDBsum:1HYI PDBsum:1HYJ PDBsum:1JOC PDBsum:3MJH
ProteinModelPortal:Q15075 SMR:Q15075 IntAct:Q15075
MINT:MINT-5004646 STRING:Q15075 PhosphoSite:Q15075 DMDM:229462866
PaxDb:Q15075 PRIDE:Q15075 DNASU:8411 Ensembl:ENST00000322349
GeneID:8411 KEGG:hsa:8411 UCSC:uc001tck.3 CTD:8411
GeneCards:GC12M093102 HGNC:HGNC:3185 HPA:CAB005861 HPA:CAB018782
HPA:HPA038158 HPA:HPA038159 MIM:605070 neXtProt:NX_Q15075
PharmGKB:PA27621 HOGENOM:HOG000112329 HOVERGEN:HBG039440
InParanoid:Q15075 KO:K12478 OMA:LKEQCKT OrthoDB:EOG4MSCXG
ChiTaRS:EEA1 EvolutionaryTrace:Q15075 GenomeRNAi:8411 NextBio:31490
PMAP-CutDB:Q15075 ArrayExpress:Q15075 Bgee:Q15075 CleanEx:HS_EEA1
Genevestigator:Q15075 GermOnline:ENSG00000102189 GO:GO:0005969
GO:GO:0016189 Uniprot:Q15075
Length = 1411
Score = 123 (48.4 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 61/248 (24%), Positives = 119/248 (47%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELR-KAVNFLELENCVQRKHNEIYQYERYVNMKN- 64
K EE +E T+ Q ++ + K L+ + K + L+L++ + + H+++ + ER + +
Sbjct: 376 KLKEELSEVETKYQHLKAEFKQLQQQREEKEQHGLQLQSEINQLHSKLLETERQLGEAHG 435
Query: 65 -LGEHET----KVQQMEQE---LTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSK 116
L E K+ EQ+ L L +++ E + +EL+ K K+ +
Sbjct: 436 RLKEQRQLSSEKLMDKEQQVADLQLKLSRLEEQLKEKVTNSTELQHQLDKTKQQHQEQQA 495
Query: 117 FRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELT 176
+ S +AK R E A+++LE L + +K+ +LEA L+K + ++ + E+L
Sbjct: 496 LQQST-TAKLR-E---AQNDLEQVLRQIGDKDQKIQNLEALLQKSKENISLLEKEREDLY 550
Query: 177 TRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQ 236
++ A E E A L L + L +QV +L ++ + ES + ++ N L D V +
Sbjct: 551 AKIQAGEGETAV----LNQLQEKNHTLQEQVTQLTEKLKNQSESHKQAQEN--LHDQVQE 604
Query: 237 LKSENRVS 244
K+ R +
Sbjct: 605 QKAHLRAA 612
Score = 59 (25.8 bits), Expect = 8.6e-05, Sum P(2) = 8.6e-05
Identities = 15/57 (26%), Positives = 31/57 (54%)
Query: 472 TSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVK 528
T L K LE++++ ++S +L+ S+ ++ +L E K KQ+++T + K
Sbjct: 768 TELSKQLEMEKEIVSSTRLDLQKKSEALESIKQKLTKQEEEKKILKQDFETLSQETK 824
Score = 58 (25.5 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/50 (34%), Positives = 28/50 (56%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVET----QLNCTGNELKYKKQE 519
L + E K+K++ +L+ EL+I QK E+E QL EL +K++
Sbjct: 964 LKQSSEQKKKQIEALQGELKIAVLQKTELENKLQQQLTQAAQELAAEKEK 1013
Score = 54 (24.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 15/56 (26%), Positives = 28/56 (50%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
K+ +KEK L + +++L + + K E ++ ELK K E + ++K K
Sbjct: 1110 KEKSLKEKELVNEKSKLAEIEEIKCRQEKEITKLNEELKSHKLESIKEITNLKDAK 1165
>UNIPROTKB|I3L5B3 [details] [associations]
symbol:LOC100621981 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00650000092896
EMBL:FP085451 Ensembl:ENSSSCT00000025354 OMA:AMETELM Uniprot:I3L5B3
Length = 1358
Score = 132 (51.5 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 77/358 (21%), Positives = 160/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 920 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-IK 978
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 979 QVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1036
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1037 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1094
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EIA S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1095 LADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1152
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1153 AELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1210
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1211 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1266
>UNIPROTKB|Q66GS9 [details] [associations]
symbol:CEP135 "Centrosomal protein of 135 kDa" species:9606
"Homo sapiens" [GO:0007099 "centriole replication" evidence=IMP]
[GO:0005814 "centriole" evidence=IDA] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0010457 "centriole-centriole
cohesion" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] InterPro:IPR026732 GO:GO:0005829
Reactome:REACT_115566 GO:GO:0000086 GO:GO:0005814 Orphanet:2512
GO:GO:0007099 EMBL:AK023683 EMBL:AC118280 EMBL:AC110611
EMBL:AC092627 EMBL:BC012003 EMBL:BC136535 EMBL:BC136536
EMBL:AB014535 EMBL:BK005586 IPI:IPI00017423 IPI:IPI00550987
RefSeq:NP_079285.2 UniGene:Hs.518767 ProteinModelPortal:Q66GS9
IntAct:Q66GS9 MINT:MINT-1200560 STRING:Q66GS9 PhosphoSite:Q66GS9
DMDM:296434460 PaxDb:Q66GS9 PRIDE:Q66GS9 Ensembl:ENST00000257287
Ensembl:ENST00000422247 GeneID:9662 KEGG:hsa:9662 UCSC:uc003hbh.1
UCSC:uc003hbi.3 CTD:9662 GeneCards:GC04P056815 H-InvDB:HIX0019826
HGNC:HGNC:29086 MIM:611423 MIM:614673 neXtProt:NX_Q66GS9
PharmGKB:PA128394551 eggNOG:NOG149145 HOGENOM:HOG000060077
HOVERGEN:HBG081318 InParanoid:Q66GS9 KO:K16461 OMA:DKEFHSH
OrthoDB:EOG49P9XN GenomeRNAi:9662 NextBio:36283 Bgee:Q66GS9
CleanEx:HS_CEP135 Genevestigator:Q66GS9 GermOnline:ENSG00000174799
GO:GO:0010457 PANTHER:PTHR23159:SF3 Uniprot:Q66GS9
Length = 1140
Score = 138 (53.6 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 61/252 (24%), Positives = 121/252 (48%)
Query: 4 LYGKYDEERT-EKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEI-YQYERYVN 61
L+GK + E+T E LT V L++ + EL+ V L ++ ++ N++ Q +++ +
Sbjct: 600 LFGKSELEKTIEHLT---CVNHQLESEKYELKSKV--LIMKETIESLENKLKVQAQKFSH 654
Query: 62 MKNLGEHE-TKVQQME---QELTANLE------SIKKCTDEMESAKSELKTVEKKGKESN 111
+ H+ T+V + ++L +++ SIK+ E+ESA++++K +E+K E N
Sbjct: 655 VAGDSSHQKTEVNSLRIVNEQLQRSVDDYQHRLSIKR--GELESAQAQIKILEEKIDELN 712
Query: 112 V-IGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKT 170
+ + S+ + KT + E + T ++T+K+A+L+ NL + + + K
Sbjct: 713 LKMTSQDEEAHVMKKT---IGVIDKEKDFLQETVDEKTEKIANLQENLANKEKAVAQMKI 769
Query: 171 LCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRL 230
+ E + V ++ + + L R+ LD K EV RE + N RL
Sbjct: 770 MISECESSVNQLKETLVNRDREINSLRRQ----LDAAHKELDEVGRSREI--AFKENRRL 823
Query: 231 IDFVMQLKSENR 242
D + + EN+
Sbjct: 824 QDDLATMARENQ 835
Score = 41 (19.5 bits), Expect = 9.2e-05, Sum P(2) = 9.2e-05
Identities = 17/57 (29%), Positives = 27/57 (47%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
KATV D S +++L +K L++ I++QQ + EL+ K E D
Sbjct: 967 KATVLNDLSSLRELCIK------LDSGKDIMTQQLNSKNLEFERVVVELENVKSESD 1017
>UNIPROTKB|F1NUI7 [details] [associations]
symbol:KIF16B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0001704 "formation of primary germ
layer" evidence=IEA] [GO:0001919 "regulation of receptor recycling"
evidence=IEA] [GO:0005547 "phosphatidylinositol-3,4,5-trisphosphate
binding" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0006895 "Golgi to endosome transport" evidence=IEA] [GO:0007173
"epidermal growth factor receptor signaling pathway" evidence=IEA]
[GO:0007492 "endoderm development" evidence=IEA] [GO:0008543
"fibroblast growth factor receptor signaling pathway" evidence=IEA]
[GO:0008574 "plus-end-directed microtubule motor activity"
evidence=IEA] [GO:0017137 "Rab GTPase binding" evidence=IEA]
[GO:0032266 "phosphatidylinositol-3-phosphate binding"
evidence=IEA] [GO:0032801 "receptor catabolic process"
evidence=IEA] [GO:0043325 "phosphatidylinositol-3,4-bisphosphate
binding" evidence=IEA] [GO:0045022 "early endosome to late endosome
transport" evidence=IEA] [GO:0080025
"phosphatidylinositol-3,5-bisphosphate binding" evidence=IEA]
InterPro:IPR000253 InterPro:IPR001683 InterPro:IPR001752
InterPro:IPR008984 InterPro:IPR019821 Pfam:PF00225 Pfam:PF00787
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 PROSITE:PS50195
SMART:SM00129 SMART:SM00240 SMART:SM00312 GO:GO:0005524
GO:GO:0007173 GO:GO:0008543 GO:GO:0005875 Gene3D:2.60.200.20
SUPFAM:SSF49879 GO:GO:0001919 GO:GO:0005547 GO:GO:0043325
GO:GO:0045022 GO:GO:0005874 GO:GO:0005769 GO:GO:0006895
GO:GO:0007018 GO:GO:0080025 GO:GO:0032266 Gene3D:3.30.1520.10
SUPFAM:SSF64268 Gene3D:3.40.850.10 GO:GO:0032801 GO:GO:0008574
OMA:IAERRSH GeneTree:ENSGT00700000104366 EMBL:AADN02044179
EMBL:AADN02044180 EMBL:AADN02044181 EMBL:AADN02044182
IPI:IPI00604104 Ensembl:ENSGALT00000014195 Uniprot:F1NUI7
Length = 1306
Score = 119 (46.9 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 48/205 (23%), Positives = 101/205 (49%)
Query: 21 LVETDLKALEPELRKAVNFLELENCVQRKHNEIYQY--ERYVNMKNLGEHETKVQQMEQE 78
L E + K E LR+ +EL+ +++ EI+ E ++ L H+ K ++M+
Sbjct: 658 LAEKE-KFEEERLREQQE-IELQK--KKQQEEIFARVKEELQRLQELN-HKEKAEKMQ-- 710
Query: 79 LTANLESIKKCTDEME-SAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSEL 137
+ LE +KK DE +SE K +E++ +E ++ + + + + + + ++
Sbjct: 711 IFRELEKLKKEKDEQYIKLESEKKRIEEQEREQVMLVAHLEEQLREKQVMIQL-LKRGDV 769
Query: 138 EIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLT 197
+ +E + L D+ +L KV+ +E + CEEL A S I + +L LT
Sbjct: 770 Q----RVEEEKRDLEDIRESLLKVKEARSEGEENCEELEK---AQHSFIEFKKKQLEQLT 822
Query: 198 REEAKLLDQVEKLAREVSEKRESMQ 222
E L+ Q++ L ++++ ++E+++
Sbjct: 823 ILEKDLVQQMDHLEKDIAHEKETLE 847
Score = 62 (26.9 bits), Expect = 9.5e-05, Sum P(2) = 9.5e-05
Identities = 19/61 (31%), Positives = 29/61 (47%)
Query: 459 RGLMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
RGL+G T+ + K++E KE++LA L Q + E N E K +K+
Sbjct: 917 RGLLGLDNTLY---QIEKEIEDKEEQLAQYRASTNQLQQLQETFEFTANVARQEEKVRKK 973
Query: 519 E 519
E
Sbjct: 974 E 974
>UNIPROTKB|F1NRD8 [details] [associations]
symbol:MYH15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0016459
"myosin complex" evidence=IEA] InterPro:IPR002928 Pfam:PF01576
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00650000092896
EMBL:AADN02032752 IPI:IPI00819429 Ensembl:ENSGALT00000036886
ArrayExpress:F1NRD8 Uniprot:F1NRD8
Length = 1088
Score = 123 (48.4 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 52/227 (22%), Positives = 109/227 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 109 LEITLAKVEKEKHATENKVKNLTEEMATLDENISKLTKEKKSLQEAHQQVLDDLQAEEDK 168
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 169 VN--TLSKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESVM------- 219
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + E + K E E+ S+ K+ D +A + ++Q + E + EEL +
Sbjct: 220 DLENDKLQMEEKLKKKEFEM-----SQLNSKIEDEQAIVMQLQKKIKELQARIEELEEEL 274
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAR------EVSEKRES 220
A + A+ + +DL RE +L +++E+ E+++KRE+
Sbjct: 275 EAERAARAKVEKQRSDLARELEELSERLEEAGGATAAQLEMNKKREA 321
Score = 56 (24.8 bits), Expect = 9.7e-05, Sum P(2) = 9.7e-05
Identities = 26/108 (24%), Positives = 45/108 (41%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + G + L E
Sbjct: 949 LDEAEQIALKGGKKQIQKLESRVRELENELENELRRNSDAQKGARKFERRIKELTYQSEE 1008
Query: 481 KEKRLASLET-----ELRILS--QQKMEVETQLNCTGNELKYKKQEYD 521
+K LA ++ +L++ S Q E E Q N + KY+KQ++D
Sbjct: 1009 DKKNLARMQDLIDKLQLKVKSYKHQAEEAEAQANLYLS--KYRKQQHD 1054
>UNIPROTKB|F1NMQ0 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913 SMART:SM00755
GO:GO:0005794 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00579194 Ensembl:ENSGALT00000037470
OMA:AQEVESE ArrayExpress:F1NMQ0 Uniprot:F1NMQ0
Length = 2150
Score = 128 (50.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 53/238 (22%), Positives = 117/238 (49%)
Query: 2 EVLYGKYDEERTEK-LTRVQLVETDLKALEPELRKAVNF---LELE-NCVQRKHNEIYQ- 55
E ++ + EE EK L ++ + +T+L+ L EL +A+ LE E + ++ K E Q
Sbjct: 613 ETVFRTHIEEMNEKTLEKLDVKQTELETLSSELSEALKVRQDLEQELSELKSKVGEAKQE 672
Query: 56 YERYVNMKNLGEHETKVQQMEQELTANLESIKKCT-DEMESAKSELKTVEKKGKESNVIG 114
+E + + +H+ +V+ M +E +++ ++K +E+ K L+ E+ +E+
Sbjct: 673 FEGKLEAER-NQHKEEVEIMLKEHEISIQDVEKVLKEELNQTKQSLEEKERLLEEAKTRE 731
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEE 174
+ + S ++ ++ +E LS Q+ ++ E L K+Q L + K +
Sbjct: 732 QELKESAQRSEAEL-VQVSARLMEASLSQQNTSNEQAKQYEEELAKLQQKLMDLKGEKLQ 790
Query: 175 LTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
L+ ++ ES++ E + L + +L Q+++ + E ++K S+ T + ++L D
Sbjct: 791 LSEQLVRTESQLNEVKNELELYISQVHELKQQLQEQSDENTQKVMSL-TQQYESQLKD 847
Score = 128 (50.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 74/352 (21%), Positives = 155/352 (44%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKA-VNFLELENCVQRKHNEIYQYERYVN-MKN 64
K E +T+ TR +K L+ +L + + + + E+ Q + ++ +K+
Sbjct: 1373 KLSEWKTKAQTRFTQNHEAIKDLQSKLEVSNTQATKKGEELDKLKEELAQQGKDLDSLKS 1432
Query: 65 -LGEHETKVQQMEQELTANL-----------ESIKKCTDEMESAKSELKTV-EKKGKESN 111
L E E ++++ E ELTA L E I + T E +S K ELK E+K E
Sbjct: 1433 VLEEKENRIEKQESELTAELKIQAARVAELEEHIAQKTSENDSLKEELKRYHEQKDMEQK 1492
Query: 112 VIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKT- 170
+ + + + K FE D E E + E + L+A E + + K+
Sbjct: 1493 EVARQLQQA---EKVAFEKDSRLKEAEEKVLNLENE---IGSLKAECEAKEREFDQMKSA 1546
Query: 171 LCEELTTRVPAMESEI-AESRARLADLTREEAKLLDQVEK-LAREVSEKRESMQTSRSNN 228
+ + + +E + AE+ +LADL ++ + + +++ L R++ EK + ++ R N
Sbjct: 1547 ILKSKEEELKELEERLNAENSCKLADLKKKAEQKIGSIKRELVRQMEEKEQQLKQDRENQ 1606
Query: 229 -RLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIA 287
R ++ +Q + E ++ + + + + V + E E VI
Sbjct: 1607 VRHLEQKVQ-EREAKIESLEEKMKSVRDSTE-LEREMLQKIESTKAAVEQ--EKNE-VIK 1661
Query: 288 AVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTP--ENVPRLIDLIQVQDEKIR 337
+V++ + ++N + D +++ ++ KY + E + L++L Q+E ++
Sbjct: 1662 SVQQTHEEKINKLQKDLIEK--NKLLQKYESEQREGIDSLLELQSKQEELLK 1711
Score = 57 (25.1 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 31/120 (25%), Positives = 50/120 (41%)
Query: 410 IEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVS 469
IE ++ V Q+ N+ + ++ L+ +IE + + S G+ S
Sbjct: 1645 IESTKAAVEQEKNEVIKSVQQTHEEKINKLQKDLIEKNKLLQKYESEQREGIDSLLELQS 1704
Query: 470 TDTSLVKDLEVKEKRLASLE--TE-LRI-LSQQKME----VETQLNCTGNELKYKKQEYD 521
L+K LE EKR + TE LR L +Q + V+ C G + + K QE D
Sbjct: 1705 KQEELLKKLECAEKRHREEQSVTEGLREELEEQAKKYSLLVDEHARCGGGDFQKKMQEKD 1764
Score = 50 (22.7 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 461 LMGRKATVSTDTSLVKDLEVKEKRLASL---ETELRILSQQKMEVETQL 506
L +++ +ST + +L V+ + + SL E + +LS Q E QL
Sbjct: 1294 LQEKESEISTLNKTINELNVRLESMVSLTEKEAAISLLSTQHQEERLQL 1342
Score = 48 (22.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 11/45 (24%), Positives = 27/45 (60%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNE 512
++ TSL +DL+ KE +++L + +++ + +E+ ++ T E
Sbjct: 1284 INAVTSLREDLQEKESEISTLN---KTINELNVRLESMVSLTEKE 1325
Score = 48 (22.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 476 KDLEVKEKR-LASLETELRI-LSQQKMEVETQLNCTGNELKYKKQEYDTCLID 526
+D+E+K L L E L+Q++ME+ET + E K QE ++ LI+
Sbjct: 1904 EDIELKHSSTLKQLMREFNTQLAQKEMELETAVK----ETISKAQEVESELIE 1952
Score = 48 (22.0 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 439 LEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQ 498
+EG + E GG + K T T L K+L + SL +L+ ++
Sbjct: 1245 IEGLVTEKEQLQKEGGHQ--KQAATEKETCITQ--LRKELSENINAVTSLREDLQ---EK 1297
Query: 499 KMEVETQLNCTGNELKYK 516
+ E+ T LN T NEL +
Sbjct: 1298 ESEIST-LNKTINELNVR 1314
>CGD|CAL0006033 [details] [associations]
symbol:orf19.6148 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005881 "cytoplasmic microtubule"
evidence=IEA] [GO:0030473 "nuclear migration along microtubule"
evidence=IEA] [GO:0051010 "microtubule plus-end binding"
evidence=IEA] InterPro:IPR011579 Pfam:PF01637 CGD:CAL0006033
GO:GO:0005524 eggNOG:NOG12793 EMBL:AACQ01000160 EMBL:AACQ01000159
RefSeq:XP_712354.1 RefSeq:XP_712390.1 ProteinModelPortal:Q59RN5
GeneID:3646018 GeneID:3646040 KEGG:cal:CaO19.13567
KEGG:cal:CaO19.6148 Uniprot:Q59RN5
Length = 1040
Score = 133 (51.9 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 57/233 (24%), Positives = 122/233 (52%)
Query: 15 KLTRVQLVETDLKALE-PELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQ 73
+L+ ++ + DL+ + ++++ V+ EL+ +++ ++ + + V + L +HE+ VQ
Sbjct: 410 QLSELKQKQIDLENTKNDQIKELVSEHELQ--IEKISKDLTEKFKLVETQLLSKHESHVQ 467
Query: 74 QMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIA 133
Q +EL A ES ++ +E+E+ LKT+ K ++ + + S +AK + E D
Sbjct: 468 QFTKELIAESESKQQVEEELEN----LKTIHAKDSV-RILELETQLSD-AAKEKSESDYK 521
Query: 134 KSEL-EIFLSTQSKETKKLADLEANLEKVQTTLT-ERKTLCE--ELTTRVPAMESEIAES 189
++ EI +S+ + L+ANL K + + K L + EL E++ +
Sbjct: 522 LTDTSEIVNDLKSQ----IETLKANLNKSEEEREIQNKKLDQVSELKELKELKVEELSNN 577
Query: 190 RARLA-DLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
++L +L R+E + +Q+EKL ++K +S+Q S +++ ++ LK +N
Sbjct: 578 LSKLQQELHRKEIESNEQLEKLHGVSADKEKSLQQSIEQSKI--YINSLKDQN 628
Score = 45 (20.9 bits), Expect = 9.9e-05, Sum P(2) = 9.9e-05
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQL 506
KA D SL +++E +L + E+E L K+E E ++
Sbjct: 803 KAKCIID-SLNEEIEELTSQLKNAESEKNTLQSLKLEYENEI 843
>UNIPROTKB|Q9BE39 [details] [associations]
symbol:MYH7 "Myosin-7" species:9913 "Bos taurus"
[GO:0030016 "myofibril" evidence=IEA] [GO:0032982 "myosin filament"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0030016 GO:GO:0003774 eggNOG:COG5022
GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352 HOGENOM:HOG000173959
HSSP:P24733 EMBL:AB059400 IPI:IPI00905341 RefSeq:NP_777152.1
UniGene:Bt.107108 UniGene:Bt.60957 ProteinModelPortal:Q9BE39
SMR:Q9BE39 STRING:Q9BE39 PRIDE:Q9BE39 GeneID:282714 KEGG:bta:282714
CTD:4625 InParanoid:Q9BE39 NextBio:20806371 Uniprot:Q9BE39
Length = 1935
Score = 128 (50.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 69/360 (19%), Positives = 155/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 957 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 1016
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1017 VN--TLTKAKVKLEQHVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQ 1074
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + S+ KKL +L+A +E+++ L +T ++
Sbjct: 1075 QLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKVEK 1134
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E RL + + ++ +K E + R ++ + + ++
Sbjct: 1135 LRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRK 1194
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + E +I A + N+ ++
Sbjct: 1195 KHADSVAELSEQIDNLQRVKQKLEKEKSEFKLELDDVTSNM----EQIIKA--KANLEKM 1248
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + R+ ++ ++Q E L+ +E L++Q L + K
Sbjct: 1249 CRTLEDQMNEHRSKAEETQRSVNDLTS--QRAKLQTENGELSRQLDEKEALISQ-LTRGK 1305
Score = 56 (24.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1797 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1856
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1857 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1902
Score = 53 (23.7 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1810 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1854
>WB|WBGene00002348 [details] [associations]
symbol:myo-1 species:6239 "Caenorhabditis elegans"
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0048017 "inositol
lipid-mediated signaling" evidence=IPI] [GO:0043050 "pharyngeal
pumping" evidence=IPI] [GO:0006936 "muscle contraction"
evidence=IMP] [GO:0005863 "striated muscle myosin thick filament"
evidence=IDA] [GO:0008307 "structural constituent of muscle"
evidence=IDA] InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 SMART:SM00242 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0043050 GO:GO:0006936
GO:GO:0008307 GO:GO:0003774 eggNOG:COG5022 EMBL:Z71266
GO:GO:0005863 GO:GO:0048017 GeneTree:ENSGT00650000092896 KO:K10352
HOGENOM:HOG000173959 EMBL:X08065 EMBL:Z71261 EMBL:M37232
EMBL:M37234 PIR:T21193 RefSeq:NP_492053.1 ProteinModelPortal:P02567
SMR:P02567 DIP:DIP-24827N MINT:MINT-1102984 STRING:P02567
PaxDb:P02567 EnsemblMetazoa:R06C7.10.1 EnsemblMetazoa:R06C7.10.2
GeneID:172471 KEGG:cel:CELE_R06C7.10 UCSC:R06C7.10.1 CTD:172471
WormBase:R06C7.10 InParanoid:P02567 OMA:TEDARSD NextBio:875649
Uniprot:P02567
Length = 1938
Score = 127 (49.8 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 43/196 (21%), Positives = 95/196 (48%)
Query: 32 ELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQELTANLESIKKCTD 91
+LR +++ L + R+ N+I+ E ++++ E T+ + QE+ ++ +++ D
Sbjct: 1490 KLRSSMDNLSEQIETLRRENKIFSQE----IRDINEQITQGGRTYQEVHKSVRRLEQEKD 1545
Query: 92 EMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKL 151
E++ A E + + +ES V+ + + V ++ E I + E E F +T+ + L
Sbjct: 1546 ELQHALDEAEAA-LEAEESKVL--RLQIEVQQIRSEIEKRIQEKEEE-FENTRKNHQRAL 1601
Query: 152 ADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLA 211
++A+LE + E ++L T + +E + + D + KL DQV++L
Sbjct: 1602 ESIQASLETEAKSKAELARAKKKLETDINQLEIALDHANKANVDAQKNLKKLFDQVKELQ 1661
Query: 212 REVSEKRESMQTSRSN 227
+V +++ + R N
Sbjct: 1662 GQVDDEQRRREEIREN 1677
Score = 57 (25.1 bits), Expect = 0.00010, Sum P(2) = 0.00010
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 476 KDLEVKEKRLASLETEL----RILSQQKMEVETQLNCTGNEL 513
K LE+++ L S TEL LS K +VE ++ NEL
Sbjct: 1707 KQLEIEQAELKSSNTELIGNNAALSAMKRKVENEVQIARNEL 1748
>UNIPROTKB|F1NX72 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA] [GO:0006281
"DNA repair" evidence=IEA] [GO:0006310 "DNA recombination"
evidence=IEA] [GO:0007062 "sister chromatid cohesion" evidence=IEA]
[GO:0030261 "chromosome condensation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR024704 InterPro:IPR010935
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00580000081569 EMBL:AADN02006734
IPI:IPI00577909 Ensembl:ENSGALT00000023006 Uniprot:F1NX72
Length = 1234
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 81/387 (20%), Positives = 166/387 (42%)
Query: 20 QLVETDLKALEPEL--RKAVNFLELENC------VQRKHNEIYQYERYVNMK--NLGE-- 67
Q +E ++K L+ L +KA+ EN V+ + E+Y + + N+ E
Sbjct: 278 QQMEREMKTLQASLIQQKALYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELE 337
Query: 68 ---HETKV------QQMEQELTANLESIKKCTDEMESAKSELKTVEKK--GKESNVIGSK 116
H+T+ ++ E+E+ +E ++ ++E K ELK + ++ + +G K
Sbjct: 338 MELHDTEKAWREFEKEAEEEILLRVERVELRERQLERYK-ELKEIARRKVATLTQQLG-K 395
Query: 117 FRWSVFSAKTRFEC-DIAKSEL-EIFLST--QSKETKKLAD-LEANLEKVQTTLTERKTL 171
RW + + R + K E+ E + T Q +E KK + LE +K +L E K
Sbjct: 396 LRWEQKADEERMKLYQRKKKEVKETIVQTVEQIEEYKKRVEKLEEYTKKCTESLEEEKKK 455
Query: 172 CEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSE-KRESMQTSRSNNRL 230
EE+ + EI S R+A++ E K++ +++ + E KR+ M+ +
Sbjct: 456 -EEMLAK------EIENSTTRIAEVNEELNKIVGELQNARIDYHEGKRQQMRAE-----I 503
Query: 231 IDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAV 289
++ + +L + S +KY +AV+ + IV T + I +
Sbjct: 504 VESLKRLYPD---SVFGRLLDLCHPIHKKYQLAVTKVFSKYMTAIVVATEKTARDCIQFL 560
Query: 290 KRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLV 349
K++ + LD ++ ++ R + ++D++Q ++ F + LV
Sbjct: 561 KQERAEPETFLALDYLEV--KPINERLREIKGAKMIVDVVQTPFAPLKRVIQFVSGNGLV 618
Query: 350 AQDLNQAKRIGYSGG-GYRMVTLEGAI 375
+ +A++I + G + V L+G +
Sbjct: 619 CDTVKEARQIAFEGPVRLKTVALDGTL 645
>UNIPROTKB|F1NX73 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0030261 "chromosome
condensation" evidence=IEA] [GO:0000775 "chromosome, centromeric
region" evidence=IEA] [GO:0000800 "lateral element" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007126 "meiosis"
evidence=IEA] [GO:0034991 "nuclear meiotic cohesin complex"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:AADN02006734
IPI:IPI00572844 Ensembl:ENSGALT00000023005 Uniprot:F1NX73
Length = 1238
Score = 131 (51.2 bits), Expect = 0.00010, P = 0.00010
Identities = 81/387 (20%), Positives = 166/387 (42%)
Query: 20 QLVETDLKALEPEL--RKAVNFLELENC------VQRKHNEIYQYERYVNMK--NLGE-- 67
Q +E ++K L+ L +KA+ EN V+ + E+Y + + N+ E
Sbjct: 278 QQMEREMKTLQASLIQQKALYIKAKENTSYQIKKVEMSKRSLRDKEKYCDKEKQNIKELE 337
Query: 68 ---HETKV------QQMEQELTANLESIKKCTDEMESAKSELKTVEKK--GKESNVIGSK 116
H+T+ ++ E+E+ +E ++ ++E K ELK + ++ + +G K
Sbjct: 338 MELHDTEKAWREFEKEAEEEILLRVERVELRERQLERYK-ELKEIARRKVATLTQQLG-K 395
Query: 117 FRWSVFSAKTRFEC-DIAKSEL-EIFLST--QSKETKKLAD-LEANLEKVQTTLTERKTL 171
RW + + R + K E+ E + T Q +E KK + LE +K +L E K
Sbjct: 396 LRWEQKADEERMKLYQRKKKEVKETIVQTVEQIEEYKKRVEKLEEYTKKCTESLEEEKKK 455
Query: 172 CEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSE-KRESMQTSRSNNRL 230
EE+ + EI S R+A++ E K++ +++ + E KR+ M+ +
Sbjct: 456 -EEMLAK------EIENSTTRIAEVNEELNKIVGELQNARIDYHEGKRQQMRAE-----I 503
Query: 231 IDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAV 289
++ + +L + S +KY +AV+ + IV T + I +
Sbjct: 504 VESLKRLYPD---SVFGRLLDLCHPIHKKYQLAVTKVFSKYMTAIVVATEKTARDCIQFL 560
Query: 290 KRQNVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLV 349
K++ + LD ++ ++ R + ++D++Q ++ F + LV
Sbjct: 561 KQERAEPETFLALDYLEV--KPINERLREIKGAKMIVDVVQTPFAPLKRVIQFVSGNGLV 618
Query: 350 AQDLNQAKRIGYSGG-GYRMVTLEGAI 375
+ +A++I + G + V L+G +
Sbjct: 619 CDTVKEARQIAFEGPVRLKTVALDGTL 645
>MGI|MGI:1930780 [details] [associations]
symbol:Myh10 "myosin, heavy polypeptide 10, non-muscle"
species:10090 "Mus musculus" [GO:0000146 "microfilament motor
activity" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000281 "cytokinesis after mitosis"
evidence=ISO;IMP] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001725 "stress fiber" evidence=ISO;IDA;IMP]
[GO:0001764 "neuron migration" evidence=IMP] [GO:0001778 "plasma
membrane repair" evidence=IMP] [GO:0003774 "motor activity"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO;IDA] [GO:0005819 "spindle" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005938 "cell
cortex" evidence=ISO;IDA] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006887 "exocytosis" evidence=IMP] [GO:0006930
"substrate-dependent cell migration, cell extension" evidence=IMP]
[GO:0007097 "nuclear migration" evidence=IMP] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0007411 "axon guidance"
evidence=IMP] [GO:0007420 "brain development" evidence=IMP]
[GO:0007512 "adult heart development" evidence=IMP] [GO:0008152
"metabolic process" evidence=ISO] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0008360 "regulation of cell shape" evidence=IMP]
[GO:0016459 "myosin complex" evidence=IDA] [GO:0016460 "myosin II
complex" evidence=IDA] [GO:0021592 "fourth ventricle development"
evidence=IMP] [GO:0021670 "lateral ventricle development"
evidence=IMP] [GO:0021678 "third ventricle development"
evidence=IMP] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IGI] [GO:0030048 "actin filament-based
movement" evidence=ISO] [GO:0030239 "myofibril assembly"
evidence=IMP] [GO:0030424 "axon" evidence=IDA] [GO:0030426 "growth
cone" evidence=IDA] [GO:0030496 "midbody" evidence=ISO] [GO:0030898
"actin-dependent ATPase activity" evidence=ISO] [GO:0031175 "neuron
projection development" evidence=IMP] [GO:0031594 "neuromuscular
junction" evidence=IDA] [GO:0032154 "cleavage furrow" evidence=ISO]
[GO:0043005 "neuron projection" evidence=IDA] [GO:0043025 "neuronal
cell body" evidence=IDA] [GO:0043197 "dendritic spine"
evidence=IDA] [GO:0043531 "ADP binding" evidence=ISO] [GO:0050885
"neuromuscular process controlling balance" evidence=IMP]
[GO:0051015 "actin filament binding" evidence=ISO] [GO:0055003
"cardiac myofibril assembly" evidence=IMP] [GO:0055015 "ventricular
cardiac muscle cell development" evidence=IMP] [GO:0060041 "retina
development in camera-type eye" evidence=IMP] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 MGI:MGI:1930780 GO:GO:0005829 GO:GO:0005524
GO:GO:0005938 GO:GO:0007411 GO:GO:0001764 GO:GO:0008360
GO:GO:0008283 GO:GO:0030424 GO:GO:0043025 GO:GO:0001701
GO:GO:0043197 GO:GO:0050885 GO:GO:0043531 GO:GO:0030426
Reactome:REACT_127416 GO:GO:0060041 GO:GO:0000281 GO:GO:0000146
GO:GO:0001725 GO:GO:0055003 GO:GO:0006887 GO:GO:0007512
GO:GO:0030496 GO:GO:0032154 GO:GO:0030048 GO:GO:0021670
EMBL:AL603662 GO:GO:0007097 eggNOG:COG5022 GO:GO:0055015
GO:GO:0021680 GO:GO:0001778 EMBL:AL645644 GO:GO:0006930
GO:GO:0021678 GO:GO:0021592 GO:GO:0016460 GO:GO:0030898 CTD:4628
GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1 SUPFAM:SSF50084
EMBL:BC089011 EMBL:AH003264 IPI:IPI00515398 RefSeq:NP_780469.1
UniGene:Mm.218233 ProteinModelPortal:Q61879 SMR:Q61879
DIP:DIP-31956N IntAct:Q61879 STRING:Q61879 PhosphoSite:Q61879
PaxDb:Q61879 PRIDE:Q61879 Ensembl:ENSMUST00000102611 GeneID:77579
KEGG:mmu:77579 InParanoid:Q61879 NextBio:347140 Bgee:Q61879
CleanEx:MM_MYH10 Genevestigator:Q61879
GermOnline:ENSMUSG00000020900 Uniprot:Q61879
Length = 1976
Score = 133 (51.9 bits), Expect = 0.00011, P = 0.00011
Identities = 77/358 (21%), Positives = 160/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 1538 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-LK 1596
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 1597 QVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1654
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1655 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1712
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EIA S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1713 LADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1770
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1771 TELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1828
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1829 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1884
>RGD|71000 [details] [associations]
symbol:Myh10 "myosin, heavy chain 10, non-muscle" species:10116
"Rattus norvegicus" [GO:0000146 "microfilament motor activity"
evidence=ISO] [GO:0000281 "cytokinesis after mitosis" evidence=ISO]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001725 "stress fiber" evidence=ISO] [GO:0001764 "neuron
migration" evidence=ISO] [GO:0001778 "plasma membrane repair"
evidence=ISO] [GO:0003774 "motor activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005938 "cell cortex"
evidence=ISO] [GO:0006887 "exocytosis" evidence=ISO] [GO:0006928
"cellular component movement" evidence=NAS] [GO:0006930
"substrate-dependent cell migration, cell extension" evidence=ISO]
[GO:0007097 "nuclear migration" evidence=ISO] [GO:0007409
"axonogenesis" evidence=ISO] [GO:0007411 "axon guidance"
evidence=ISO] [GO:0007420 "brain development" evidence=ISO]
[GO:0007512 "adult heart development" evidence=ISO] [GO:0008283
"cell proliferation" evidence=ISO] [GO:0008360 "regulation of cell
shape" evidence=IEA;ISO] [GO:0016459 "myosin complex"
evidence=IEA;ISO] [GO:0016460 "myosin II complex" evidence=ISO]
[GO:0021592 "fourth ventricle development" evidence=ISO] [GO:0021670
"lateral ventricle development" evidence=ISO] [GO:0021678 "third
ventricle development" evidence=ISO] [GO:0021680 "cerebellar
Purkinje cell layer development" evidence=ISO] [GO:0030036 "actin
cytoskeleton organization" evidence=ISO] [GO:0030048 "actin
filament-based movement" evidence=ISO] [GO:0030239 "myofibril
assembly" evidence=ISO] [GO:0030424 "axon" evidence=ISO] [GO:0030426
"growth cone" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
[GO:0030898 "actin-dependent ATPase activity" evidence=ISO]
[GO:0031175 "neuron projection development" evidence=ISO]
[GO:0032154 "cleavage furrow" evidence=ISO] [GO:0043005 "neuron
projection" evidence=ISO] [GO:0043025 "neuronal cell body"
evidence=ISO] [GO:0043197 "dendritic spine" evidence=ISO]
[GO:0043531 "ADP binding" evidence=ISO] [GO:0050885 "neuromuscular
process controlling balance" evidence=ISO] [GO:0051015 "actin
filament binding" evidence=IEA;ISO] [GO:0055003 "cardiac myofibril
assembly" evidence=ISO] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=ISO] [GO:0060041 "retina development in
camera-type eye" evidence=ISO] [GO:0005819 "spindle" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:71000 GO:GO:0005886 GO:GO:0005524 GO:GO:0005938
GO:GO:0007411 GO:GO:0001764 GO:GO:0005819 GO:GO:0008360
GO:GO:0008283 GO:GO:0030424 GO:GO:0043025 GO:GO:0001701
GO:GO:0043197 GO:GO:0031594 GO:GO:0050885 GO:GO:0043531
GO:GO:0006928 GO:GO:0030426 GO:GO:0060041 GO:GO:0000281
GO:GO:0000146 GO:GO:0001725 GO:GO:0055003 GO:GO:0006887
GO:GO:0007512 GO:GO:0030496 GO:GO:0032154 GO:GO:0030048
GO:GO:0021670 GO:GO:0007097 eggNOG:COG5022 GO:GO:0055015
GO:GO:0021680 GO:GO:0001778 GO:GO:0006930 GO:GO:0021678
GO:GO:0021592 GO:GO:0016460 GO:GO:0030898 CTD:4628
HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352 SUPFAM:SSF50084
EMBL:AF139055 IPI:IPI00949586 RefSeq:NP_113708.1 UniGene:Rn.98166
ProteinModelPortal:Q9JLT0 SMR:Q9JLT0 STRING:Q9JLT0
PhosphoSite:Q9JLT0 PRIDE:Q9JLT0 GeneID:79433 KEGG:rno:79433
UCSC:RGD:71000 InParanoid:Q9JLT0 NextBio:614799 ArrayExpress:Q9JLT0
Genevestigator:Q9JLT0 GermOnline:ENSRNOG00000002886 Uniprot:Q9JLT0
Length = 1976
Score = 133 (51.9 bits), Expect = 0.00011, P = 0.00011
Identities = 77/358 (21%), Positives = 160/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 1538 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-LK 1596
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 1597 QVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1654
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1655 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1712
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EIA S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1713 LADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1770
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1771 TELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1828
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1829 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1884
>UNIPROTKB|G3V9Y1 [details] [associations]
symbol:Myh10 "Myosin-10" species:10116 "Rattus norvegicus"
[GO:0000146 "microfilament motor activity" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001725 "stress
fiber" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001778 "plasma membrane repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007512 "adult heart
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0016460 "myosin II complex" evidence=IEA] [GO:0021592 "fourth
ventricle development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021680 "cerebellar Purkinje cell
layer development" evidence=IEA] [GO:0030048 "actin filament-based
movement" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0030898 "actin-dependent ATPase activity"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0032154 "cleavage furrow" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0043197 "dendritic spine"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0055003
"cardiac myofibril assembly" evidence=IEA] [GO:0055015 "ventricular
cardiac muscle cell development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:71000 GO:GO:0005524 EMBL:CH473948 GO:GO:0003774
GO:GO:0016459 GeneTree:ENSGT00650000092896 SUPFAM:SSF50084
UniGene:Rn.98166 ProteinModelPortal:G3V9Y1
Ensembl:ENSRNOT00000065895 Uniprot:G3V9Y1
Length = 1976
Score = 133 (51.9 bits), Expect = 0.00011, P = 0.00011
Identities = 77/358 (21%), Positives = 160/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 1538 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-LK 1596
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 1597 QVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1654
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1655 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1712
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EIA S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1713 LADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1770
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1771 TELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1828
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1829 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1884
>UNIPROTKB|F1LMQ5 [details] [associations]
symbol:Myh10 "Myosin-10" species:10116 "Rattus norvegicus"
[GO:0000146 "microfilament motor activity" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001725 "stress
fiber" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001778 "plasma membrane repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007512 "adult heart
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0016460 "myosin II complex" evidence=IEA] [GO:0021592 "fourth
ventricle development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021680 "cerebellar Purkinje cell
layer development" evidence=IEA] [GO:0030048 "actin filament-based
movement" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0030898 "actin-dependent ATPase activity"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0032154 "cleavage furrow" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0043197 "dendritic spine"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0055003
"cardiac myofibril assembly" evidence=IEA] [GO:0055015 "ventricular
cardiac muscle cell development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 RGD:71000 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 IPI:IPI00211813 PRIDE:F1LMQ5
Ensembl:ENSRNOT00000003983 ArrayExpress:F1LMQ5 Uniprot:F1LMQ5
Length = 2009
Score = 133 (51.9 bits), Expect = 0.00011, P = 0.00011
Identities = 77/358 (21%), Positives = 160/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 1571 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-LK 1629
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 1630 QVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1687
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1688 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1745
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EIA S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1746 LADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1803
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1804 TELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1861
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1862 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1917
>UNIPROTKB|F1LQ02 [details] [associations]
symbol:Myh10 "Myosin-10" species:10116 "Rattus norvegicus"
[GO:0000146 "microfilament motor activity" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0001725 "stress
fiber" evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0001778 "plasma membrane repair" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005938 "cell
cortex" evidence=IEA] [GO:0006887 "exocytosis" evidence=IEA]
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IEA] [GO:0007512 "adult heart
development" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0016460 "myosin II complex" evidence=IEA] [GO:0021592 "fourth
ventricle development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021680 "cerebellar Purkinje cell
layer development" evidence=IEA] [GO:0030048 "actin filament-based
movement" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030496 "midbody"
evidence=IEA] [GO:0030898 "actin-dependent ATPase activity"
evidence=IEA] [GO:0031594 "neuromuscular junction" evidence=IEA]
[GO:0032154 "cleavage furrow" evidence=IEA] [GO:0043025 "neuronal
cell body" evidence=IEA] [GO:0043197 "dendritic spine"
evidence=IEA] [GO:0043531 "ADP binding" evidence=IEA] [GO:0050885
"neuromuscular process controlling balance" evidence=IEA]
[GO:0051015 "actin filament binding" evidence=IEA] [GO:0055003
"cardiac myofibril assembly" evidence=IEA] [GO:0055015 "ventricular
cardiac muscle cell development" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:71000 GO:GO:0005886 GO:GO:0005524 GO:GO:0005938
GO:GO:0007411 GO:GO:0001764 GO:GO:0005819 GO:GO:0008360
GO:GO:0008283 GO:GO:0030424 GO:GO:0043025 GO:GO:0001701
GO:GO:0043197 GO:GO:0031594 GO:GO:0050885 GO:GO:0043531
GO:GO:0030426 GO:GO:0060041 GO:GO:0000281 GO:GO:0000146
GO:GO:0001725 GO:GO:0055003 GO:GO:0006887 GO:GO:0007512
GO:GO:0030496 GO:GO:0032154 GO:GO:0030048 GO:GO:0021670
GO:GO:0007097 GO:GO:0055015 GO:GO:0021680 GO:GO:0001778
GO:GO:0006930 GO:GO:0021678 GO:GO:0021592 GO:GO:0016460
GO:GO:0030898 OMA:DKNVHEL SUPFAM:SSF50084 IPI:IPI00391300
Ensembl:ENSRNOT00000030500 ArrayExpress:F1LQ02 Uniprot:F1LQ02
Length = 2013
Score = 133 (51.9 bits), Expect = 0.00011, P = 0.00011
Identities = 77/358 (21%), Positives = 160/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 1575 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-LK 1633
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 1634 QVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1691
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1692 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1749
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EIA S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1750 LADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1807
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1808 TELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1865
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1866 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1921
>UNIPROTKB|P35749 [details] [associations]
symbol:MYH11 "Myosin-11" species:9606 "Homo sapiens"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032982 "myosin filament" evidence=IEA] [GO:0001725 "stress
fiber" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005859 "muscle myosin complex" evidence=IEA] [GO:0030485
"smooth muscle contractile fiber" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0048251 "elastic fiber assembly"
evidence=IMP] [GO:0048739 "cardiac muscle fiber development"
evidence=IMP] [GO:0006939 "smooth muscle contraction" evidence=ISS]
[GO:0030241 "skeletal muscle myosin thick filament assembly"
evidence=ISS] [GO:0008307 "structural constituent of muscle"
evidence=IMP] [GO:0005829 "cytosol" evidence=TAS] [GO:0006936
"muscle contraction" evidence=TAS] [GO:0007411 "axon guidance"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005829 GO:GO:0005524 GO:GO:0042470 Reactome:REACT_111045
GO:GO:0007411 GO:GO:0006939 GO:GO:0001725 Orphanet:91387
Reactome:REACT_17044 GO:GO:0030485 GO:GO:0008307 GO:GO:0003774
eggNOG:COG5022 GO:GO:0048251 GO:GO:0030241 GO:GO:0048739
EMBL:AC130651 EMBL:AC026401 EMBL:CH471226 GO:GO:0005859
GO:GO:0032982 HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352
OrthoDB:EOG4TXBR1 CTD:4629 EMBL:AY520816 EMBL:AY520817
EMBL:AF001548 EMBL:U91323 EMBL:AB020673 EMBL:GU143400 EMBL:AC024120
EMBL:BC101677 EMBL:BC104906 EMBL:BC143364 EMBL:D10667 EMBL:X69292
IPI:IPI00020501 IPI:IPI00024870 IPI:IPI00743857 IPI:IPI00744256
RefSeq:NP_001035202.1 RefSeq:NP_001035203.1 RefSeq:NP_002465.1
RefSeq:NP_074035.1 UniGene:Hs.460109 ProteinModelPortal:P35749
SMR:P35749 DIP:DIP-47268N IntAct:P35749 STRING:P35749
PhosphoSite:P35749 DMDM:13432177 PaxDb:P35749 PRIDE:P35749
Ensembl:ENST00000300036 Ensembl:ENST00000338282
Ensembl:ENST00000396324 Ensembl:ENST00000452625
Ensembl:ENST00000576790 GeneID:4629 KEGG:hsa:4629 UCSC:uc002ddy.3
GeneCards:GC16M015704 HGNC:HGNC:7569 HPA:CAB002302 HPA:HPA014539
HPA:HPA015310 MIM:132900 MIM:160745 neXtProt:NX_P35749
Orphanet:98829 Orphanet:229 PharmGKB:PA31367 PhylomeDB:P35749
ChiTaRS:MYH11 GenomeRNAi:4629 NextBio:17818 ArrayExpress:P35749
Bgee:P35749 CleanEx:HS_MYH11 Genevestigator:P35749
GermOnline:ENSG00000133392 Uniprot:P35749
Length = 1972
Score = 122 (48.0 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 45/223 (20%), Positives = 104/223 (46%)
Query: 13 TEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE--T 70
T + +Q E +L+ + +KA N EL+ +++KH+++ + + + + E E
Sbjct: 848 TRQEEEMQAKEDELQKTKERQQKAEN--ELKE-LEQKHSQLTEEKNLLQEQLQAETELYA 904
Query: 71 KVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFEC 130
+ ++M L A + +++ EME+ L+ E +G++ K + + + E
Sbjct: 905 EAEEMRVRLAAKKQELEEILHEMEA---RLEEEEDRGQQLQAERKKMAQQMLDLEEQLEE 961
Query: 131 D-IAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAES 189
+ A+ +L++ T + KKL D ++ L++ + L EE R+ + + +AE
Sbjct: 962 EEAARQKLQLEKVTAEAKIKKLEDEILVMDDQNNKLSKERKLLEE---RISDLTTNLAEE 1018
Query: 190 RARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
+ +LT+ + K + +L + ++ +S Q R ++
Sbjct: 1019 EEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKLKRKLE 1061
Score = 62 (26.9 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 15/31 (48%), Positives = 19/31 (61%)
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVE 503
+L K+ + EK A L ELR+L Q K EVE
Sbjct: 1221 NLDKNKQTLEKENADLAGELRVLGQAKQEVE 1251
Score = 53 (23.7 bits), Expect = 0.00091, Sum P(2) = 0.00091
Identities = 13/42 (30%), Positives = 23/42 (54%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCT 509
VS+ + K++ EK +LET++ + Q E+E +L T
Sbjct: 1517 VSSKDDVGKNVHELEKSKRALETQMEEMKTQLEELEDELQAT 1558
>MGI|MGI:106067 [details] [associations]
symbol:Smc2 "structural maintenance of chromosomes 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000228 "nuclear chromosome" evidence=ISO]
[GO:0000793 "condensed chromosome" evidence=ISO;IDA] [GO:0000796
"condensin complex" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005694 "chromosome" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0007062 "sister
chromatid cohesion" evidence=IEA] [GO:0007067 "mitosis"
evidence=IEA] [GO:0007076 "mitotic chromosome condensation"
evidence=ISO] [GO:0010032 "meiotic chromosome condensation"
evidence=IMP] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0051276 "chromosome organization" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0051383 "kinetochore
organization" evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 MGI:MGI:106067 GO:GO:0005524
GO:GO:0005737 GO:GO:0051301 GO:GO:0006281 EMBL:CH466565
GO:GO:0006310 GO:GO:0045132 GO:GO:0000793 GO:GO:0007076
GO:GO:0051383 GO:GO:0000228 GO:GO:0000796 GO:GO:0010032
GO:GO:0007062 eggNOG:COG1196 SUPFAM:SSF75553
GeneTree:ENSGT00550000074857 KO:K06674 PANTHER:PTHR18937:SF9
OMA:CQNGKIP CTD:10592 HOVERGEN:HBG106605 OrthoDB:EOG49S65K
EMBL:AJ534939 EMBL:AK013109 EMBL:AK019977 EMBL:AL732619
EMBL:BC094380 EMBL:U42385 IPI:IPI00987134 RefSeq:NP_032043.3
UniGene:Mm.2999 PDB:3L51 PDBsum:3L51 ProteinModelPortal:Q8CG48
SMR:Q8CG48 IntAct:Q8CG48 STRING:Q8CG48 PhosphoSite:Q8CG48
PaxDb:Q8CG48 PRIDE:Q8CG48 Ensembl:ENSMUST00000102915
Ensembl:ENSMUST00000117280 GeneID:14211 KEGG:mmu:14211
InParanoid:Q52KE9 EvolutionaryTrace:Q8CG48 NextBio:285461
Bgee:Q8CG48 CleanEx:MM_SMC2 Genevestigator:Q8CG48
GermOnline:ENSMUSG00000028312 Uniprot:Q8CG48
Length = 1191
Score = 126 (49.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 114/548 (20%), Positives = 228/548 (41%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCV--QRKHNEIYQYER 58
+E L + D+E KL ++ + + + + + A + L+ +N + K E+ Q
Sbjct: 281 IEELERRKDKETGGKLKSLEDACAEAQRVNTKSQSAFD-LKKKNLASEETKRKEL-QNSM 338
Query: 59 YVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFR 118
+ K L E +V+++ L E+ K + + +A+ V G SN G++
Sbjct: 339 AEDSKALAAKEKEVKKITDGLHGLQEASNKDAEALAAAQQHFNAVSA-GLSSNEDGAEA- 396
Query: 119 WSVFSAKTRFECDIAKSELEIFLSTQSK---ETKKLADLEANLEKVQTTLTERKTLCEEL 175
++ + DI+K++ E Q K ++L +A ++K+ + + + E +
Sbjct: 397 -TLAGQMIACKNDISKAQTEA-KQAQMKLKHAQQELKSKQAEVKKMDSGYKKDQDAFEAV 454
Query: 176 TTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSE---KRESMQTSRSNNRLID 232
+E+E+ +L +E KLL++ +L+R+++ K E++ ++ N
Sbjct: 455 KKAKEKLETEMK----KLNYEENKEEKLLEKHRQLSRDINNLKGKHEAL-LAKFPNLQFA 509
Query: 233 FVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNY-IVTETVEAGEAVIAAVKR 291
+ K+ NR S A+ G Y +V +T + ++ K
Sbjct: 510 YKDPEKNWNRNSVKGLVASLINVKDNSTATALEVVAGERLYNVVVDTEVTAKKLLE--KG 567
Query: 292 QNVGRVNVIPLDKMQQYHSQCY--DKYRT------PENVPRLIDLIQVQDEKIR-LAFYF 342
+ R +IPL+K+ ++C + R P+NV + L+ + E + + F F
Sbjct: 568 ELKRRYTIIPLNKIS---ARCIAPETLRVAQNLVGPDNVHVALSLVDYKPELQKGMEFVF 624
Query: 343 ATRETLVAQDLNQAKRIGYSGGGY-RMVTLEGAIIEPSETLVAQDLNQAKRIGYSGGGYR 401
T T V +++ AK++ + R VTL G + +P TL +QA I +
Sbjct: 625 GT--TFVCNNMDNAKKVAFDKRIMTRTVTLGGDVFDPHGTLSGGARSQAASILTKFQEVK 682
Query: 402 MVTLEGAIIEPSETLVAQDL----NQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNP 457
V E E + ++L N A++ + M T EG +++ S
Sbjct: 683 DVQDELRTKENELRALEEELAGLKNVAEKYRQLKQQWEMKTEEGDLLQTKLQQSSYHKQQ 742
Query: 458 IRGLMGRKATV--STDT-SLVKDLEVK-EKRLASLETELRILSQQKMEVETQLNCTGNEL 513
L K T+ S +T K+++ K E++ +LE +++ + E E +L +L
Sbjct: 743 -EELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMK---NAEAEREKELKDAQKKL 798
Query: 514 KYKKQEYD 521
K + D
Sbjct: 799 DCAKTKAD 806
Score = 124 (48.7 bits), Expect = 0.00057, P = 0.00057
Identities = 50/217 (23%), Positives = 100/217 (46%)
Query: 15 KLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEI-YQYERYVNMKNLGEHETKV 72
K V+ V+ +L+ E ELR L L+N V K+ ++ Q+E +L +TK+
Sbjct: 677 KFQEVKDVQDELRTKENELRALEEELAGLKN-VAEKYRQLKQQWEMKTEEGDL--LQTKL 733
Query: 73 QQME-QELTANLESIKKCTDEMESAKSELKTVEKKGKES-NVIGSKFRWSVFSAKTRFEC 130
QQ + L+++KK +E E K ++KK +E + +K + + A+ E
Sbjct: 734 QQSSYHKQQEELDALKKTIEESEETLKSTKEIQKKAEEKYEALENKMKNA--EAEREKEL 791
Query: 131 DIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESR 190
A+ +L+ + +KK+ + + +E + L E K ++ A+ I
Sbjct: 792 KDAQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELKREHASNEQQLDAVNEAIKAYE 851
Query: 191 ARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN 227
++ + E AK + V K E+ ++++ + T++ N
Sbjct: 852 GQIEKMAAEVAKNKESVNKAQDELMKQKQII-TAQDN 887
Score = 53 (23.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/56 (28%), Positives = 33/56 (58%)
Query: 478 LEVKEKRL-ASLETELRILSQQKME-VETQLNCTGNELKYKKQEYDTCLIDVKSPK 531
LE K K A E EL+ +Q+K++ +T+ + + ++K K+QE + ++++ K
Sbjct: 776 LENKMKNAEAEREKELKD-AQKKLDCAKTKADASSKKMKEKQQEVEAITLELEELK 830
>UNIPROTKB|G3MZG5 [details] [associations]
symbol:CENPE "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005874 "microtubule" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0007018 "microtubule-based movement"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IEA] [GO:0003777 "microtubule motor activity"
evidence=IEA] InterPro:IPR001752 InterPro:IPR019821 Pfam:PF00225
PRINTS:PR00380 PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
GO:GO:0005524 GO:GO:0005875 GO:GO:0005874 GO:GO:0003777
GO:GO:0007018 Gene3D:3.40.850.10 GeneTree:ENSGT00680000099922
EMBL:DAAA02016732 Ensembl:ENSBTAT00000063831 Uniprot:G3MZG5
Length = 2683
Score = 134 (52.2 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 55/241 (22%), Positives = 115/241 (47%)
Query: 7 KYDEERTEKLTRVQLV--ETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKN 64
K EE +KL RV L ET++ ++ EL A + L Q+K E+Y+ ++++ +K
Sbjct: 1544 KEQEEIIDKL-RVDLSKRETEISHIQQELETANDKL------QKKTQELYE-KQFITIKE 1595
Query: 65 LGEHETKVQQMEQ---ELTANLESIK-------KCTDEMESAKSELKTVEKKGKESNVIG 114
+ E + K+ ++EQ L A S++ K T++++ ++ ELKT+ K+G E +
Sbjct: 1596 ISETQEKMSELEQLKEHLKAKDSSLQRKESERLKLTEKLQGSQEELKTIIKEGDELERVQ 1655
Query: 115 SKFRWSVFSAKTRFECDIAK-SELEIFLSTQSKETKKLADLEANLEKV------QTTLTE 167
+ K + +A S+++ L + + ++ D+ EK+ + L
Sbjct: 1656 EALQKETDQLKENTKEIVADFSQIQE-LQEEEHQLLEMKDVSETWEKICEMENLKKQLEA 1714
Query: 168 RKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN 227
+K+ E + + E+ A + +T+E L + E L E+ + +E+++ + S
Sbjct: 1715 QKSTLENTEWENIKLTQRLNENIAEIRSVTKERDDLRNMEETLKVEIDQLKENLRETMSR 1774
Query: 228 N 228
+
Sbjct: 1775 D 1775
Score = 52 (23.4 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 12/47 (25%), Positives = 27/47 (57%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
V++ ++L ++ + +K++ +LET LR + M E ++ EL+
Sbjct: 2481 VASSSTLKEEADSLQKKIQALETSLREAKESAMHKEGKIMKMQKELE 2527
Score = 45 (20.9 bits), Expect = 0.00061, Sum P(2) = 0.00061
Identities = 14/65 (21%), Positives = 34/65 (52%)
Query: 466 ATVSTDTSLVKDLEVKEKRLASL-ETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
+ + D + KD E ++K + E + + L KM+ ++ + NE+K K++++
Sbjct: 2098 SNIQKDLNKSKD-EFQKKNYVKIQELQRKELQLLKMKDVSKTHKKVNEMKQLKKQFEAQS 2156
Query: 525 IDVKS 529
+ ++S
Sbjct: 2157 LSMQS 2161
Score = 44 (20.5 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 474 LVKDLEVKEKRLASLETE-LRILSQQKMEVE 503
L K LE + L S+ETE LR+ + VE
Sbjct: 1842 LKKQLETQNSILESIETEKLRLTQKLHENVE 1872
Score = 44 (20.5 bits), Expect = 0.00077, Sum P(2) = 0.00077
Identities = 13/40 (32%), Positives = 23/40 (57%)
Query: 475 VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
V++L+ E+RL L+ E+ ++ ++E QL NE K
Sbjct: 1975 VQELKANEQRLFKLKEEISETKKKMCDIE-QLK---NEFK 2010
>TAIR|locus:2014240 [details] [associations]
symbol:AT1G64330 "AT1G64330" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005774
eggNOG:NOG12793 EMBL:AC066689 HSSP:P08670 EMBL:BT012293
EMBL:AK221546 IPI:IPI00532935 PIR:C96667 RefSeq:NP_176615.1
UniGene:At.36012 ProteinModelPortal:Q9C7V7 IntAct:Q9C7V7
PaxDb:Q9C7V7 PRIDE:Q9C7V7 EnsemblPlants:AT1G64330.1 GeneID:842739
KEGG:ath:AT1G64330 TAIR:At1g64330 InParanoid:Q9C7V7 OMA:EREATIK
PhylomeDB:Q9C7V7 Genevestigator:Q9C7V7 Uniprot:Q9C7V7
Length = 555
Score = 122 (48.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 58/243 (23%), Positives = 109/243 (44%)
Query: 6 GKYDEERTEKLTRVQLVETDLKALEP----------ELRKAVNFLELENCVQRKHNEIYQ 55
G +E+ +++L +LV+ K E E+RK V+ + EN +
Sbjct: 47 GDIEEDESKRLVVAELVKDFYKEYESLYHQYDDLTGEIRKKVHG-KGENDSSSSSSSDSD 105
Query: 56 YERYVNMKNLGEHETKVQQMEQELTANLE--SIKK---CTDE-MESAKSELKTVEKKGKE 109
++ GE+E ++ + + E ANLE +K TDE E+ +SE + + KK KE
Sbjct: 106 SDKKSKRNGRGENEIELLKKQME-DANLEIADLKMKLATTDEHKEAVESEHQEILKKLKE 164
Query: 110 SNVIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERK 169
S+ I R V + K E +LE+ T+S +KL D++ + ++ L +
Sbjct: 165 SDEICGNLR--VETEKLTSENKELNEKLEVAGETESDLNQKLEDVKKERDGLEAELASKA 222
Query: 170 TLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNR 229
E V ++ + E+ A L +E+ LL+Q+ + + + E+ + T ++
Sbjct: 223 KDHESTLEEVNRLQGQKNETEAELEREKQEKPALLNQINDVQKALLEQEAAYNTLSQEHK 282
Query: 230 LID 232
I+
Sbjct: 283 QIN 285
Score = 49 (22.3 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 14/43 (32%), Positives = 27/43 (62%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
++E ++++++E +LR LS QK+ V Q+ T E + K+ E
Sbjct: 357 EIESLMEKMSNIEVKLR-LSNQKLRVTEQV-LTEKEGELKRIE 397
Score = 43 (20.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 15/67 (22%), Positives = 31/67 (46%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
K+ T K L +K + ++ E ++++K EVE +L E + +K++ L
Sbjct: 449 KSYEKTVVEATKMLLTAKKCVVEMKKEKDEMAKEKEEVEKKLEGQVREEEKEKEKLKETL 508
Query: 525 IDVKSPK 531
+ + K
Sbjct: 509 LGLGEEK 515
>MGI|MGI:107717 [details] [associations]
symbol:Myh9 "myosin, heavy polypeptide 9, non-muscle"
species:10090 "Mus musculus" [GO:0000146 "microfilament motor
activity" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000212 "meiotic spindle organization"
evidence=IDA] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=ISO] [GO:0001525 "angiogenesis" evidence=ISO] [GO:0001701
"in utero embryonic development" evidence=IMP] [GO:0001725 "stress
fiber" evidence=ISO;IDA] [GO:0001726 "ruffle" evidence=ISO]
[GO:0001768 "establishment of T cell polarity" evidence=IMP]
[GO:0001772 "immunological synapse" evidence=ISO;IDA] [GO:0001931
"uropod" evidence=ISO;IDA] [GO:0003774 "motor activity"
evidence=IEA] [GO:0003779 "actin binding" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005768 "endosome" evidence=ISO] [GO:0005819 "spindle"
evidence=IDA] [GO:0005826 "actomyosin contractile ring"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO;IDA] [GO:0005913 "cell-cell adherens junction"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006509 "membrane protein
ectodomain proteolysis" evidence=ISO] [GO:0006928 "cellular
component movement" evidence=IMP] [GO:0007132 "meiotic metaphase I"
evidence=IDA] [GO:0007155 "cell adhesion" evidence=IMP] [GO:0007520
"myoblast fusion" evidence=IMP] [GO:0008360 "regulation of cell
shape" evidence=ISO;IMP] [GO:0010524 "positive regulation of
calcium ion transport into cytosol" evidence=ISO] [GO:0015031
"protein transport" evidence=ISO] [GO:0015629 "actin cytoskeleton"
evidence=ISO] [GO:0016328 "lateral plasma membrane" evidence=ISO]
[GO:0016337 "cell-cell adhesion" evidence=IMP] [GO:0016459 "myosin
complex" evidence=IDA] [GO:0016460 "myosin II complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0019901 "protein kinase binding" evidence=ISO] [GO:0030048
"actin filament-based movement" evidence=ISO] [GO:0030220 "platelet
formation" evidence=ISO] [GO:0030863 "cortical cytoskeleton"
evidence=IDA] [GO:0030898 "actin-dependent ATPase activity"
evidence=ISO] [GO:0031252 "cell leading edge" evidence=ISO]
[GO:0031532 "actin cytoskeleton reorganization" evidence=ISO]
[GO:0031594 "neuromuscular junction" evidence=IDA] [GO:0031762
"follicle-stimulating hormone receptor binding" evidence=ISO]
[GO:0032154 "cleavage furrow" evidence=ISO] [GO:0032796 "uropod
organization" evidence=IMP] [GO:0042803 "protein homodimerization
activity" evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0043495 "protein anchor" evidence=ISO] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0043534 "blood vessel endothelial cell
migration" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0045807 "positive regulation of endocytosis"
evidence=ISO] [GO:0050766 "positive regulation of phagocytosis"
evidence=ISO] [GO:0051015 "actin filament binding" evidence=ISO]
[GO:0051295 "establishment of meiotic spindle localization"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=ISO] Reactome:REACT_88307 InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 MGI:MGI:107717
GO:GO:0005829 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
Reactome:REACT_147847 GO:GO:0042803 GO:GO:0008360 GO:GO:0030863
GO:GO:0015031 GO:GO:0001701 GO:GO:0051015 GO:GO:0043531
GO:GO:0001525 GO:GO:0016887 GO:GO:0005913 GO:GO:0000910
GO:GO:0031532 GO:GO:0000146 GO:GO:0001725 GO:GO:0001726
GO:GO:0043495 GO:GO:0016337 GO:GO:0005826 GO:GO:0006509
GO:GO:0007520 GO:GO:0043534 GO:GO:0008180 GO:GO:0032154
GO:GO:0030048 eggNOG:COG5022 GO:GO:0051295 GO:GO:0030224
GO:GO:0001768 GO:GO:0007132 GO:GO:0032796 GO:GO:0001931
GO:GO:0000212 GO:GO:0030220 GO:GO:0008305 GO:GO:0016460
GO:GO:0030898 GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1 CTD:4627 OMA:EMRQKHS
ChiTaRS:MYH9 EMBL:AJ312390 EMBL:AK147203 EMBL:AK147206
EMBL:AK147208 EMBL:AK147209 EMBL:AK147210 EMBL:AK147211
EMBL:AK147215 EMBL:AK147216 EMBL:AK147221 EMBL:AK147222
EMBL:AK147223 EMBL:AK147233 EMBL:AK147235 EMBL:AK147296
EMBL:AK147407 EMBL:AK147430 EMBL:AL583886 EMBL:AK131171
EMBL:BC044834 IPI:IPI00123181 RefSeq:NP_071855.2 UniGene:Mm.29677
ProteinModelPortal:Q8VDD5 SMR:Q8VDD5 DIP:DIP-29546N IntAct:Q8VDD5
MINT:MINT-2524850 STRING:Q8VDD5 PhosphoSite:Q8VDD5 PaxDb:Q8VDD5
PRIDE:Q8VDD5 Ensembl:ENSMUST00000016771 GeneID:17886 KEGG:mmu:17886
UCSC:uc007woc.1 InParanoid:Q8VDD5 NextBio:292701 Bgee:Q8VDD5
CleanEx:MM_MYH9 Genevestigator:Q8VDD5 GermOnline:ENSMUSG00000022443
Uniprot:Q8VDD5
Length = 1960
Score = 135 (52.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 51/232 (21%), Positives = 106/232 (45%)
Query: 12 RTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETK 71
+ EK R L E +L+AL+ EL ++ + ++ K + + HE +
Sbjct: 1129 KAEKQKR-DLGE-ELEALKTELEDTLDSTAAQQELRSKREQEVSILKKTLEDEAKTHEAQ 1186
Query: 72 VQQMEQ-------ELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
+Q+M Q EL LE K+ +E AK L+ ++G+ +N + + + S
Sbjct: 1187 IQEMRQKHSQAVEELADQLEQTKRVKATLEKAKQTLEN--ERGELANEVKALLQGKGDSE 1244
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLAD----LEANLEKVQTTLTERKTLCEELTTRVP 180
R + + EL++ S + +LAD L+ L+ V L++ + +LT
Sbjct: 1245 HKRKKVEAQLQELQVKFSEGERVRTELADKVTKLQVELDSVTGLLSQSDSKSSKLTKDFS 1304
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
A+ES++ +++ L + R++ L +++++ E + RE ++ R ++
Sbjct: 1305 ALESQLQDTQELLQEENRQKLSLSTKLKQMEDEKNSFREQLEEEEEAKRNLE 1356
Score = 128 (50.1 bits), Expect = 0.00037, P = 0.00037
Identities = 74/357 (20%), Positives = 154/357 (43%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + ++ + ++
Sbjct: 1531 EQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQL-VR 1589
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + + + KK +++ ++ + T K +E+ K + +
Sbjct: 1590 QVREMEAELEDERKQRSMAMAARKKLEMDLKDLEAHIDTANKNREEAIKQLRKLQAQMKD 1649
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
+ D S EI + E KKL +EA + ++Q L + + +
Sbjct: 1650 CMRELD-DTRASREEILAQAKENE-KKLKSMEAEMIQLQEELAAAERAKRQAQQERDELA 1707
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENR- 242
EIA S + A E+ +L ++ +L E+ E E T N+RL +Q+ N
Sbjct: 1708 DEIANSSGKGALALEEKRRLEARIAQLEEELEE--EQGNTELINDRLKKANLQIDQINTD 1765
Query: 243 VSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPL 302
++ Q+ + L + + +A IAA++ + + ++ L
Sbjct: 1766 LNLERSHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAK-IAQLEE-QL 1823
Query: 303 DKMQQYHSQCYDKYRTPENVPRLID-LIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
D + + R E +L D L+QV+DE+ R A F + + L Q KR
Sbjct: 1824 DNETKERQAASKQVRRTEK--KLKDVLLQVEDER-RNAEQFKDQADKASTRLKQLKR 1877
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 483 KRLASLETELRILSQQKMEVETQLNCTGNELK 514
K + LE R L QQ E++TQL +EL+
Sbjct: 1518 KSVHELEKSKRALEQQVEEMKTQLEELEDELQ 1549
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 471 DTSLVKD-LEVKEKRLASLETEL---RILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
+T L+ D L+ ++ + T+L R +Q+ QL ELK K QE ++ +
Sbjct: 1744 NTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKAKLQEMESAV 1801
Score = 44 (20.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 478 LEVKEKRLASLETELRILSQ---QKMEVETQLNCTGNELKYKKQEYDTCLIDV 527
LE E+ L+ +L LSQ +K+ +L T L+ QE D L+D+
Sbjct: 1380 LETAEEAKRRLQKDLEGLSQRLEEKVAAYDKLEKTKTRLQ---QELDDLLVDL 1429
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCT 509
+S+ + K + EK +LE ++ + Q E+E +L T
Sbjct: 1510 MSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEELEDELQAT 1551
>UNIPROTKB|G3V6P7 [details] [associations]
symbol:Myh9 "Myosin-9" species:10116 "Rattus norvegicus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 RGD:3140 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:CH473950
GeneTree:ENSGT00650000092896 KO:K10352 OMA:EMRQKHS UniGene:Rn.11385
RefSeq:XP_003750426.1 PRIDE:G3V6P7 Ensembl:ENSRNOT00000007398
GeneID:100911597 KEGG:rno:100911597 Uniprot:G3V6P7
Length = 1960
Score = 135 (52.6 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 51/232 (21%), Positives = 105/232 (45%)
Query: 12 RTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETK 71
+ EK R L E +L+AL+ EL ++ + ++ K + + HE +
Sbjct: 1129 KAEKQKR-DLGE-ELEALKTELEDTLDSTAAQQELRSKREQEVSILKKTLEDEAKTHEAQ 1186
Query: 72 VQQMEQ-------ELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
+Q+M Q EL LE K+ +E AK L+ ++G+ +N + + + S
Sbjct: 1187 IQEMRQKHSQAVEELAEQLEQTKRVKATLEKAKQTLEN--ERGELANEVKALLQGKGDSE 1244
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLAD----LEANLEKVQTTLTERKTLCEELTTRVP 180
R + + EL++ S + +LAD L+ L+ V L + + +LT
Sbjct: 1245 HKRKKVEAQLQELQVKFSEGERVRTELADKVSKLQVELDSVTGLLNQSDSKSSKLTKDFS 1304
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
A+ES++ +++ L + R++ L +++++ E + RE ++ R ++
Sbjct: 1305 ALESQLQDTQELLQEENRQKLSLSTKLKQMEDEKNSFREQLEEEEEAKRNLE 1356
Score = 128 (50.1 bits), Expect = 0.00037, P = 0.00037
Identities = 74/357 (20%), Positives = 154/357 (43%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + ++ + ++
Sbjct: 1531 EQQVEEMKTQLEELEDELQATEDAKLRLEVNLQAMKAQFERDLQGRDEQSEEKKKQL-VR 1589
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + + + KK +++ ++ + T K +E+ K + +
Sbjct: 1590 QVREMEAELEDERKQRSIAMAARKKLEMDLKDLEAHIDTANKNREEAIKQLRKLQAQMKD 1649
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
+ D S EI + E KKL +EA + ++Q L + + +
Sbjct: 1650 CMRELD-DTRASREEILAQAKENE-KKLKSMEAEMIQLQEELAAAERAKRQAQQERDELA 1707
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENR- 242
EIA S + A E+ +L ++ +L E+ E E T N+RL +Q+ N
Sbjct: 1708 DEIANSSGKGALALEEKRRLEARIAQLEEELEE--EQGNTELINDRLKKANLQIDQINTD 1765
Query: 243 VSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPL 302
++ Q+ + L + + +A IAA++ + + ++ L
Sbjct: 1766 LNLERSHAQKNENARQQLERQNKELKAKLQEMESAVKSKYKASIAALEAK-IAQLEE-QL 1823
Query: 303 DKMQQYHSQCYDKYRTPENVPRLID-LIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
D + + R E +L D L+QV+DE+ R A F + + L Q KR
Sbjct: 1824 DNETKERQAASKQVRRAEK--KLKDVLLQVEDER-RNAEQFKDQADKASTRLKQLKR 1877
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 483 KRLASLETELRILSQQKMEVETQLNCTGNELK 514
K + LE R L QQ E++TQL +EL+
Sbjct: 1518 KSVHELEKSKRALEQQVEEMKTQLEELEDELQ 1549
Score = 48 (22.0 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 471 DTSLVKD-LEVKEKRLASLETEL---RILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
+T L+ D L+ ++ + T+L R +Q+ QL ELK K QE ++ +
Sbjct: 1744 NTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKAKLQEMESAV 1801
Score = 44 (20.5 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 478 LEVKEKRLASLETELRILSQ---QKMEVETQLNCTGNELKYKKQEYDTCLIDV 527
LE E+ L+ +L LSQ +K+ +L T L+ QE D L+D+
Sbjct: 1380 LETAEEAKRRLQKDLEGLSQRLEEKVAAYDKLEKTKTRLQ---QELDDLLVDL 1429
Score = 42 (19.8 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCT 509
+S+ + K + EK +LE ++ + Q E+E +L T
Sbjct: 1510 MSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEELEDELQAT 1551
>UNIPROTKB|F1S9D6 [details] [associations]
symbol:MYH7 "Myosin-7" species:9823 "Sus scrofa"
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0032982 "myosin filament" evidence=IEA]
[GO:0030898 "actin-dependent ATPase activity" evidence=IEA]
[GO:0030049 "muscle filament sliding" evidence=IEA] [GO:0030018 "Z
disc" evidence=IEA] [GO:0008307 "structural constituent of muscle"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0005925 "focal adhesion" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0002027 "regulation of heart rate" evidence=IEA]
[GO:0001725 "stress fiber" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0003774
"motor activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0005634 GO:GO:0030018 GO:GO:0005925 GO:GO:0001725
GO:GO:0030049 GO:GO:0008307 GO:GO:0007512 GO:GO:0002027
GO:GO:0003774 GO:GO:0055010 GO:GO:0030898 GO:GO:0032982
GeneTree:ENSGT00680000099788 OMA:EQTPGKG EMBL:CU633625
Ensembl:ENSSSCT00000002271 Uniprot:F1S9D6
Length = 1934
Score = 127 (49.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 69/360 (19%), Positives = 155/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 956 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 1015
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1016 VN--TLTKAKVKLEQHVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQ 1073
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + S+ KKL +L+A +E+++ L +T ++
Sbjct: 1074 QLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKVEK 1133
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E RL + + ++ +K E + R ++ + + ++
Sbjct: 1134 LRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRK 1193
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + E +I A + N+ ++
Sbjct: 1194 KHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNM----EQIIKA--KANLEKM 1247
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + R+ ++ ++Q E L+ +E L++Q L + K
Sbjct: 1248 CRTLEDQMNEHRSKAEETQRSVNDLTS--QRAKLQTENGELSRQLDEKEALISQ-LTRGK 1304
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1796 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1855
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1856 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1901
Score = 53 (23.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1809 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1853
>UNIPROTKB|P79293 [details] [associations]
symbol:MYH7 "Myosin-7" species:9823 "Sus scrofa"
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IEA] [GO:0032982 "myosin filament" evidence=IEA]
[GO:0030898 "actin-dependent ATPase activity" evidence=IEA]
[GO:0030049 "muscle filament sliding" evidence=IEA] [GO:0030018 "Z
disc" evidence=IEA] [GO:0008307 "structural constituent of muscle"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0005925 "focal adhesion" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0002027 "regulation of heart rate" evidence=IEA]
[GO:0001725 "stress fiber" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0003774 "motor
activity" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 GO:GO:0005524 GO:GO:0005634 GO:GO:0030018
GO:GO:0005925 GO:GO:0001725 GO:GO:0030049 GO:GO:0008307
GO:GO:0007512 GO:GO:0002027 GO:GO:0003774 eggNOG:COG5022
GO:GO:0055010 GO:GO:0030898 GO:GO:0032982 HOVERGEN:HBG004704
KO:K10352 HOGENOM:HOG000173959 CTD:4625 EMBL:U75316 EMBL:AB053226
PIR:A59286 RefSeq:NP_999020.1 UniGene:Ssc.1544
ProteinModelPortal:P79293 SMR:P79293 STRING:P79293 PRIDE:P79293
GeneID:396860 KEGG:ssc:396860 Uniprot:P79293
Length = 1935
Score = 127 (49.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 69/360 (19%), Positives = 155/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 957 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 1016
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1017 VN--TLTKAKVKLEQHVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQ 1074
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + S+ KKL +L+A +E+++ L +T ++
Sbjct: 1075 QLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKVEK 1134
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E RL + + ++ +K E + R ++ + + ++
Sbjct: 1135 LRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRK 1194
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + E +I A + N+ ++
Sbjct: 1195 KHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNM----EQIIKA--KANLEKM 1248
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + R+ ++ ++Q E L+ +E L++Q L + K
Sbjct: 1249 CRTLEDQMNEHRSKAEETQRSVNDLTS--QRAKLQTENGELSRQLDEKEALISQ-LTRGK 1305
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1797 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1856
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1857 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1902
Score = 53 (23.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1810 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1854
>MGI|MGI:2155600 [details] [associations]
symbol:Myh7 "myosin, heavy polypeptide 7, cardiac muscle,
beta" species:10090 "Mus musculus" [GO:0000146 "microfilament motor
activity" evidence=ISO] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IDA] [GO:0002027
"regulation of heart rate" evidence=ISO] [GO:0003774 "motor
activity" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005859 "muscle myosin complex" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0007512 "adult heart development" evidence=ISO]
[GO:0008307 "structural constituent of muscle" evidence=ISO]
[GO:0016459 "myosin complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0030016 "myofibril" evidence=IDA]
[GO:0030018 "Z disc" evidence=IDA] [GO:0030049 "muscle filament
sliding" evidence=ISO] [GO:0030898 "actin-dependent ATPase
activity" evidence=ISO] [GO:0032982 "myosin filament" evidence=ISO]
[GO:0042803 "protein homodimerization activity" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=ISO] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 MGI:MGI:2155600 GO:GO:0005524 GO:GO:0005634
GO:GO:0030018 GO:GO:0005925 GO:GO:0000302 GO:GO:0000146
GO:GO:0001725 GO:GO:0030049 GO:GO:0008307 GO:GO:0007512
GO:GO:0002027 eggNOG:COG5022 GO:GO:0016459 GO:GO:0055010
GO:GO:0005859 GO:GO:0030898 GO:GO:0032982 HOVERGEN:HBG004704
KO:K10352 HOGENOM:HOG000173959 HSSP:P24733 OrthoDB:EOG42JNQH
GeneTree:ENSGT00680000099788 CTD:4625 EMBL:AY056464 EMBL:AK147031
EMBL:AK157742 EMBL:AK168677 EMBL:AK169198 EMBL:AK169371
EMBL:BC121789 IPI:IPI00130653 RefSeq:NP_542766.1 UniGene:Mm.457983
ProteinModelPortal:Q91Z83 SMR:Q91Z83 IntAct:Q91Z83 STRING:Q91Z83
PhosphoSite:Q91Z83 PaxDb:Q91Z83 PRIDE:Q91Z83
Ensembl:ENSMUST00000102803 Ensembl:ENSMUST00000168485 GeneID:140781
KEGG:mmu:140781 InParanoid:Q91Z83 OMA:EQTPGKG NextBio:369981
Bgee:Q91Z83 CleanEx:MM_MYH7 Genevestigator:Q91Z83 Uniprot:Q91Z83
Length = 1935
Score = 127 (49.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 69/360 (19%), Positives = 155/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 957 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIVKLTKEKKALQEAHQQALDDLQAEEDK 1016
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1017 VN--TLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQ 1074
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + S+ KKL +L+A +E+++ L +T ++
Sbjct: 1075 QLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKVEK 1134
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E RL + + ++ +K E + R ++ + + ++
Sbjct: 1135 LRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRK 1194
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + E +I A + N+ ++
Sbjct: 1195 KHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNM----EQIIKA--KANLEKM 1248
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + R+ ++ ++Q E L+ +E L++Q L + K
Sbjct: 1249 CRTLEDQMNEHRSKAEETQRSVNDLTS--QRAKLQTENGELSRQLDEKEALISQ-LTRGK 1305
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1797 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1856
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1857 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1902
Score = 53 (23.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1810 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1854
>UNIPROTKB|G3V8B0 [details] [associations]
symbol:Myh7 "Myosin-7" species:10116 "Rattus norvegicus"
[GO:0001725 "stress fiber" evidence=IEA] [GO:0002027 "regulation of
heart rate" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005925 "focal adhesion" evidence=IEA] [GO:0007512 "adult heart
development" evidence=IEA] [GO:0008307 "structural constituent of
muscle" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0030049 "muscle filament sliding" evidence=IEA] [GO:0030898
"actin-dependent ATPase activity" evidence=IEA] [GO:0032982 "myosin
filament" evidence=IEA] [GO:0055010 "ventricular cardiac muscle
tissue morphogenesis" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 RGD:62030 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 EMBL:CH474049
GeneTree:ENSGT00680000099788 Ensembl:ENSRNOT00000024186
Uniprot:G3V8B0
Length = 1935
Score = 127 (49.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 69/360 (19%), Positives = 155/360 (43%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 957 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIVKLTKEKKALQEAHQQALDDLQAEEDK 1016
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1017 VN--TLTKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIMDLENDKQ 1074
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE + + +E + S+ KKL +L+A +E+++ L +T ++
Sbjct: 1075 QLDERLKKKDFELNALNARIEDEQALGSQLQKKLKELQARIEELEEELEAERTARAKVEK 1134
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ E+ E RL + + ++ +K E + R ++ + + ++
Sbjct: 1135 LRSDLSRELEEISERLEEAGGATSVQIEMNKKREAEFQKMRRDLEEATLQHEATAAALRK 1194
Query: 238 KSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRV 297
K + V+ QK + S L+ + + E +I A + N+ ++
Sbjct: 1195 KHADSVAELGEQIDNLQRVKQKLEKEKSEFKLELDDVTSNM----EQIIKA--KANLEKM 1248
Query: 298 NVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
D+M ++ S+ + R+ ++ ++Q E L+ +E L++Q L + K
Sbjct: 1249 CRTLEDQMNEHRSKAEETQRSVNDLTS--QRAKLQTENGELSRQLDEKEALISQ-LTRGK 1305
Score = 56 (24.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1797 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1856
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1857 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1902
Score = 53 (23.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1810 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1854
>UNIPROTKB|H0YD93 [details] [associations]
symbol:RUFY2 "RUN and FYVE domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 GO:GO:0005634 GO:GO:0046872 Gene3D:3.30.40.10
InterPro:IPR017455 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 PROSITE:PS50178 InterPro:IPR004012 Pfam:PF02759
SMART:SM00593 PROSITE:PS50826 EMBL:AL136233 EMBL:AC016395
HGNC:HGNC:19761 ChiTaRS:RUFY2 Ensembl:ENST00000466493
Uniprot:H0YD93
Length = 620
Score = 104 (41.7 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 61/250 (24%), Positives = 114/250 (45%)
Query: 8 YDEERTEKL-TRVQLVETDLKALEPELRKAVNFLEL--ENCV--QRKHNEIYQYERYVNM 62
Y EE +L + V + + + +LE K + L + N + Q +++++ + + M
Sbjct: 222 YVEELNRQLNSTVSSLHSRVDSLEKSNTKLIEELAIAKNNIIKLQEENHQLRSENKLILM 281
Query: 63 KNLGEHE-TKVQQMEQELTANLESIKKCTDEM-ESAKSELKTVE--KKGKESNV-IGSKF 117
K E TKV +E EL S ++ DEM A+ +L+ ++ E+ + +
Sbjct: 282 KTQQHLEVTKVD-VETELQTYKHS-RQGLDEMYNEARRQLRDESQLRQDVENELAVQVSM 339
Query: 118 RWSVFSAKTRFECDI-AKSELEIFLSTQSKETKKL-ADLEANLEKVQTTLTERKTLC--- 172
+ + A E DI K + I L Q +E K + ++ L+ + L E+ +
Sbjct: 340 KHEIELAMKLLEKDIHEKQDTLIGLRQQLEEVKAINIEMYQKLQGSEDGLKEKNEIIARL 399
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQT--SRSNNRL 230
EE T ++ A ++ E R + A+ + EA+ D+ EK +E K +S+Q S+ +L
Sbjct: 400 EEKTNKITAAMRQL-EQRLQQAEKAQMEAE--DEDEKYLQECLSKSDSLQKQISQKEKQL 456
Query: 231 IDFVMQLKSE 240
+ LK E
Sbjct: 457 VQLETDLKIE 466
Score = 69 (29.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+S SL K + KEK+L LET+L+I + + ++ L + L + + E
Sbjct: 439 LSKSDSLQKQISQKEKQLVQLETDLKIEKEWRQTLQEDLQKEKDALSHLRNE 490
>UNIPROTKB|P93203 [details] [associations]
symbol:MFP1 "MAR-binding filament-like protein 1"
species:4081 "Solanum lycopersicum" [GO:0005515 "protein binding"
evidence=IPI] GO:GO:0003677 GO:GO:0016363 EMBL:Y07861 PIR:T07111
RefSeq:NP_001234309.1 UniGene:Les.98 ProteinModelPortal:P93203
IntAct:P93203 GeneID:544122 Uniprot:P93203
Length = 697
Score = 127 (49.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 55/230 (23%), Positives = 105/230 (45%)
Query: 18 RVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQY--ERYVNMKN-LGEHETKVQQ 74
++ L+ T++K E LR + L + +++YQ ++ +N+ + + E + ++Q+
Sbjct: 251 KITLLTTEIKDKEVSLRSNTSKLAEKESEVNSLSDMYQQSQDQLMNLTSEIKELKDEIQK 310
Query: 75 MEQELTA------NLE-SIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTR 127
E+EL NL + E + +K EL ++K+ E S V S T
Sbjct: 311 RERELELKCVSEDNLNVQLNSLLLERDESKKELHAIQKEYSEFK---SNSDEKVASDATL 367
Query: 128 FECDIAKSELEIFLSTQSKETKK----LADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
E + +LE L T E K +ADL E ++ + +L + +
Sbjct: 368 GEQEKRLHQLEEQLGTALSEASKNEVLIADLTREKENLRRMVDAELDNVNKLKQEIEVTQ 427
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN-NRLID 232
+ SR+ ++D+T + +L D KL REVS+ + ++ +R++ R ID
Sbjct: 428 ESLENSRSEVSDITVQLEQLRDLSSKLEREVSKLQMELEETRASLQRNID 477
Score = 46 (21.3 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLN 507
L K+ E EKR LE E+ + + + +Q+N
Sbjct: 640 LGKERESLEKRAKKLEDEMAAAKGEILRLRSQIN 673
Score = 45 (20.9 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 17/54 (31%), Positives = 28/54 (51%)
Query: 465 KATVSTDT------SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNE 512
KAT S D +L ++LE+ R +SLE E R + +Q + + Q++ E
Sbjct: 576 KATESLDEINRNVLALAEELELATSRNSSLEDE-REVHRQSVSEQKQISQEAQE 628
>UNIPROTKB|F1SSA6 [details] [associations]
symbol:LOC396903 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0016459 "myosin complex" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003774 "motor activity"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 Pfam:PF00063 Pfam:PF00612 Pfam:PF01576
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00650000092896 OMA:DKNVHEL EMBL:CU672254
Ensembl:ENSSSCT00000019573 ArrayExpress:F1SSA6 Uniprot:F1SSA6
Length = 1864
Score = 132 (51.5 bits), Expect = 0.00013, P = 0.00013
Identities = 77/358 (21%), Positives = 160/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 1426 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-IK 1484
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 1485 QVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1542
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1543 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1600
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EIA S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1601 LADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1658
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1659 AELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1716
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1717 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1772
>UNIPROTKB|Q27991 [details] [associations]
symbol:MYH10 "Myosin-10" species:9913 "Bos taurus"
[GO:0006930 "substrate-dependent cell migration, cell extension"
evidence=ISS] [GO:0006887 "exocytosis" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0001778 "plasma membrane repair"
evidence=ISS] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0001725 "stress fiber" evidence=ISS] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0055015
"ventricular cardiac muscle cell development" evidence=IEA]
[GO:0055003 "cardiac myofibril assembly" evidence=IEA] [GO:0051015
"actin filament binding" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0043531 "ADP
binding" evidence=IEA] [GO:0043197 "dendritic spine" evidence=IEA]
[GO:0043025 "neuronal cell body" evidence=IEA] [GO:0032154
"cleavage furrow" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0030898 "actin-dependent ATPase
activity" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0030424 "axon"
evidence=IEA] [GO:0030048 "actin filament-based movement"
evidence=IEA] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=IEA] [GO:0021678 "third ventricle
development" evidence=IEA] [GO:0021670 "lateral ventricle
development" evidence=IEA] [GO:0021592 "fourth ventricle
development" evidence=IEA] [GO:0016460 "myosin II complex"
evidence=IEA] [GO:0008360 "regulation of cell shape" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0007512 "adult
heart development" evidence=IEA] [GO:0007411 "axon guidance"
evidence=IEA] [GO:0007097 "nuclear migration" evidence=IEA]
[GO:0005938 "cell cortex" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005819 "spindle" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0000146
"microfilament motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 InterPro:IPR008989
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005886
GO:GO:0005524 GO:GO:0005938 GO:GO:0005737 GO:GO:0007411
GO:GO:0001764 GO:GO:0005819 GO:GO:0008360 GO:GO:0008283
GO:GO:0030424 GO:GO:0043025 GO:GO:0001701 GO:GO:0043197
GO:GO:0031594 GO:GO:0050885 GO:GO:0043531 GO:GO:0030426
GO:GO:0060041 GO:GO:0000281 GO:GO:0000146 GO:GO:0001725
GO:GO:0055003 GO:GO:0006887 GO:GO:0007512 GO:GO:0030496
GO:GO:0032154 GO:GO:0030048 GO:GO:0021670 GO:GO:0007097
eggNOG:COG5022 GO:GO:0055015 GO:GO:0021680 GO:GO:0001778
GO:GO:0006930 GO:GO:0021678 GO:GO:0021592 GO:GO:0016460
GO:GO:0030898 EMBL:AB022023 EMBL:U15716 IPI:IPI00709219
RefSeq:NP_777259.1 UniGene:Bt.4057 UniGene:Bt.92698
ProteinModelPortal:Q27991 SMR:Q27991 STRING:Q27991 PRIDE:Q27991
Ensembl:ENSBTAT00000028188 GeneID:317655 KEGG:bta:317655 CTD:4628
GeneTree:ENSGT00650000092896 HOGENOM:HOG000173958
HOVERGEN:HBG004704 InParanoid:Q27991 KO:K10352 OMA:DKNVHEL
OrthoDB:EOG4TXBR1 NextBio:20807131 SUPFAM:SSF50084 Uniprot:Q27991
Length = 1976
Score = 132 (51.5 bits), Expect = 0.00014, P = 0.00014
Identities = 77/358 (21%), Positives = 160/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 1538 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-IK 1596
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 1597 QVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1654
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1655 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1712
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EIA S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1713 LADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1770
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1771 TELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1828
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1829 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1884
>UNIPROTKB|F1PVV7 [details] [associations]
symbol:MYH10 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0016459 "myosin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0051015 "actin filament
binding" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005524 GO:GO:0003774
GO:GO:0016459 GeneTree:ENSGT00650000092896 OMA:DKNVHEL
SUPFAM:SSF50084 EMBL:AAEX03003644 EMBL:AAEX03003645
Ensembl:ENSCAFT00000027478 Uniprot:F1PVV7
Length = 2046
Score = 132 (51.5 bits), Expect = 0.00014, P = 0.00014
Identities = 77/358 (21%), Positives = 160/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 1608 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-VK 1666
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 1667 QVRELEAELEDERKQRALAVASKKKLEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1724
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1725 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1782
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EIA S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1783 LADEIANSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1840
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1841 AELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1898
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1899 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1954
>UNIPROTKB|E1C614 [details] [associations]
symbol:E1C614 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00819568
Ensembl:ENSGALT00000037605 OMA:FESINES ArrayExpress:E1C614
Uniprot:E1C614
Length = 1149
Score = 117 (46.2 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 415 TLVAQDLNQAKRIGYSGGGYRM-VTLEGAIIEPSGTMSGGGSNPIRGLMGRKATV--STD 471
TLV ++ AK++ + R VTL+G I +P GT+SGG S+ + ++ + T+ + D
Sbjct: 592 TLVCSSMDNAKKVTFDKRIMRKTVTLQGDIFDPQGTLSGGASSHVTPILSKLKTMRDAED 651
Query: 472 TSLVK--DLEVKEKRLASLET---ELRILSQQ---KMEVETQLNCTGNELKYKKQEYD 521
+K LE EK LA+L+ + + L QQ K E L + Y KQ+ D
Sbjct: 652 ELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQED 709
Score = 55 (24.4 bits), Expect = 0.00060, Sum P(2) = 0.00060
Identities = 41/160 (25%), Positives = 65/160 (40%)
Query: 70 TKVQQMEQ-ELTANLESIKKCTDEMESAK-SELKTVEKKGKESNVIGSKFRWSVFSAKTR 127
TKV M+ E+ A +E T E K + KT+EKK ES + + R + + +
Sbjct: 151 TKVLNMKPTEILAMIEEAAAGTRMYECMKITAHKTIEKK--ESKL--DEIR-RIITEEIS 205
Query: 128 FECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTER-KTLCEELTTRVPAMESEI 186
+ K +L Q K T+++ +L Q E K A + +I
Sbjct: 206 PTLEKLKEARASYLEYQ-KMTREVENLRRIYVAFQYVRAEEIKDRSTNALKEAQANKKKI 264
Query: 187 AESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRS 226
ES A +E A+ +++ EK EV R M + S
Sbjct: 265 FESMAENEKKVKELAQQIEETEKKNNEV---RTQMCSPES 301
Score = 54 (24.1 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 14 EKL--TRVQLVETDLKALEPE-LRK---AVNFLELENCVQRKHNEIY--QYERYVNMKNL 65
EKL R +E E E LR+ A ++ E R N + Q + +++
Sbjct: 209 EKLKEARASYLEYQKMTREVENLRRIYVAFQYVRAEEIKDRSTNALKEAQANKKKIFESM 268
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKK 106
E+E KV+++ Q++ + + +M S +S +K V KK
Sbjct: 269 AENEKKVKELAQQIEETEKKNNEVRTQMCSPES-VKEVHKK 308
Score = 50 (22.7 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 23/94 (24%), Positives = 45/94 (47%)
Query: 96 AKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETK-KLADL 154
A+ +LK +++ K K S + FE I K++ + L + K+ K + A+
Sbjct: 384 AQMKLKYAQQELKTKQAEVKKMDGSYKEDQEAFEA-IRKTKEK--LQDEMKKLKYEEAEQ 440
Query: 155 EANLEK---VQTTLTERKTLCEELTTRVPAMESE 185
EA+L K + + ++ + LCE + + P + E
Sbjct: 441 EAHLAKKKQLSSEISSLRELCESIEAKHPYLRFE 474
>RGD|619812 [details] [associations]
symbol:Calcoco1 "calcium binding and coiled coil domain 1"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0003674 "molecular_function" evidence=ND]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003712
"transcription cofactor activity" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0005575
"cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0016055 "Wnt receptor signaling pathway"
evidence=IEA] [GO:0030374 "ligand-dependent nuclear receptor
transcription coactivator activity" evidence=ISO] [GO:0030518
"intracellular steroid hormone receptor signaling pathway"
evidence=ISO] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0044212 "transcription regulatory region
DNA binding" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0070016 "armadillo repeat domain binding"
evidence=ISO] RGD:619812 GO:GO:0005737 GO:GO:0016055 GO:GO:0043565
GO:GO:0045944 GO:GO:0006351 GO:GO:0003682 GO:GO:0044212
GO:GO:0000790 GO:GO:0030374 CTD:57658 eggNOG:NOG114876
HOGENOM:HOG000111283 HOVERGEN:HBG107573 OrthoDB:EOG4NZTTD
InterPro:IPR012852 Pfam:PF07888 GeneTree:ENSGT00530000063216
OMA:YDMASGF GO:GO:0030518 EMBL:AY078385 EMBL:BC081722
IPI:IPI00200139 RefSeq:NP_631929.1 RefSeq:XP_003750466.1
UniGene:Rn.162973 ProteinModelPortal:Q66HR5 PRIDE:Q66HR5
Ensembl:ENSRNOT00000021523 GeneID:100912282 GeneID:246047
KEGG:rno:100912282 KEGG:rno:246047 InParanoid:Q66HR5 NextBio:623311
Genevestigator:Q66HR5 Uniprot:Q66HR5
Length = 691
Score = 115 (45.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 46/241 (19%), Positives = 109/241 (45%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEH 68
+++ TE +RVQ +E L E + E + R H E+ + ER + + GEH
Sbjct: 171 EDQVTELRSRVQELEAALATARQEHSELT---EQYKGLSRSHGELSE-ERDILSQQQGEH 226
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
++ ++E ++ + + E++ + +K + ++ + ++G + ++
Sbjct: 227 VARILELEDDIQTMSDKVLMKEVELDRVRDMVKALTRE--QEKLLGQLKEFQADKEQSEA 284
Query: 129 ECDIAKSELEIFLSTQSKETK-KLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIA 187
E + E L+T+ +E K + + A +++++ + K + +V +E
Sbjct: 285 ELQTVREE-NCHLNTELQEAKGRQEEQGAQVQRLKDKVAHMKDTLGQTQQKVAELEPLKE 343
Query: 188 ESRA--RLADLTREEAKLL-DQVEKLA----REVSE-KRESMQTSRSNNRLIDFVMQLKS 239
+ R LA ++++A LL +++ A R ++E R ++ + N RL + + +K
Sbjct: 344 QLRGVQELAASSQQKAALLGEELASAAGARDRTIAELHRSRLEVAEVNGRLAELSLHMKE 403
Query: 240 E 240
E
Sbjct: 404 E 404
Score = 58 (25.5 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 12/35 (34%), Positives = 24/35 (68%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
D+SLV+ L ++ L L + LR+L ++K +++T+
Sbjct: 459 DSSLVQ-LSESKRELTELRSALRVLQKEKEQLQTE 492
>UNIPROTKB|Q8WXA3 [details] [associations]
symbol:RUFY2 "RUN and FYVE domain-containing protein 2"
species:9606 "Homo sapiens" [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000306 Pfam:PF01363
SMART:SM00064 GO:GO:0005634 GO:GO:0046872 EMBL:CH471083
Gene3D:3.30.40.10 InterPro:IPR017455 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 PROSITE:PS50178
InterPro:IPR004012 Pfam:PF02759 SMART:SM00593 PROSITE:PS50826
EMBL:AL136233 EMBL:AC016395 eggNOG:NOG270133 HOVERGEN:HBG057053
HOGENOM:HOG000030913 EMBL:AF461266 EMBL:AK127019 EMBL:BC041092
EMBL:AB040970 EMBL:AF411980 IPI:IPI00217122 IPI:IPI00465048
IPI:IPI00760675 IPI:IPI00973533 RefSeq:NP_001035882.1
RefSeq:NP_060457.4 UniGene:Hs.653144 ProteinModelPortal:Q8WXA3
SMR:Q8WXA3 IntAct:Q8WXA3 STRING:Q8WXA3 PhosphoSite:Q8WXA3
DMDM:110287949 PaxDb:Q8WXA3 PRIDE:Q8WXA3 DNASU:55680
Ensembl:ENST00000265865 Ensembl:ENST00000388768
Ensembl:ENST00000399200 GeneID:55680 KEGG:hsa:55680 UCSC:uc001job.3
UCSC:uc001joc.3 UCSC:uc001jod.1 CTD:55680 GeneCards:GC10M070100
HGNC:HGNC:19761 HPA:HPA039792 MIM:610328 neXtProt:NX_Q8WXA3
PharmGKB:PA134935922 InParanoid:Q8WXA3 OMA:GQVWLKD
OrthoDB:EOG4JT051 ChiTaRS:RUFY2 GenomeRNAi:55680 NextBio:60468
ArrayExpress:Q8WXA3 Bgee:Q8WXA3 CleanEx:HS_RUFY2
Genevestigator:Q8WXA3 GermOnline:ENSG00000204130 Uniprot:Q8WXA3
Length = 655
Score = 104 (41.7 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 61/250 (24%), Positives = 114/250 (45%)
Query: 8 YDEERTEKL-TRVQLVETDLKALEPELRKAVNFLEL--ENCV--QRKHNEIYQYERYVNM 62
Y EE +L + V + + + +LE K + L + N + Q +++++ + + M
Sbjct: 257 YVEELNRQLNSTVSSLHSRVDSLEKSNTKLIEELAIAKNNIIKLQEENHQLRSENKLILM 316
Query: 63 KNLGEHE-TKVQQMEQELTANLESIKKCTDEM-ESAKSELKTVE--KKGKESNV-IGSKF 117
K E TKV +E EL S ++ DEM A+ +L+ ++ E+ + +
Sbjct: 317 KTQQHLEVTKVD-VETELQTYKHS-RQGLDEMYNEARRQLRDESQLRQDVENELAVQVSM 374
Query: 118 RWSVFSAKTRFECDI-AKSELEIFLSTQSKETKKL-ADLEANLEKVQTTLTERKTLC--- 172
+ + A E DI K + I L Q +E K + ++ L+ + L E+ +
Sbjct: 375 KHEIELAMKLLEKDIHEKQDTLIGLRQQLEEVKAINIEMYQKLQGSEDGLKEKNEIIARL 434
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQT--SRSNNRL 230
EE T ++ A ++ E R + A+ + EA+ D+ EK +E K +S+Q S+ +L
Sbjct: 435 EEKTNKITAAMRQL-EQRLQQAEKAQMEAE--DEDEKYLQECLSKSDSLQKQISQKEKQL 491
Query: 231 IDFVMQLKSE 240
+ LK E
Sbjct: 492 VQLETDLKIE 501
Score = 69 (29.3 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 16/52 (30%), Positives = 28/52 (53%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+S SL K + KEK+L LET+L+I + + ++ L + L + + E
Sbjct: 474 LSKSDSLQKQISQKEKQLVQLETDLKIEKEWRQTLQEDLQKEKDALSHLRNE 525
>UNIPROTKB|Q97QG7 [details] [associations]
symbol:smc "Chromosome partition protein Smc"
species:170187 "Streptococcus pneumoniae TIGR4" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR024704 HAMAP:MF_01894
InterPro:IPR010935 InterPro:IPR011890 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0005737 GO:GO:0005694 GO:GO:0003677
GO:GO:0006260 GO:GO:0006281 GO:GO:0006310 EMBL:AE005672
GenomeReviews:AE005672_GR GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 HOGENOM:HOG000036392 KO:K03529 TIGRFAMs:TIGR02168
HSSP:Q9X0R4 OMA:GDITKFI PIR:G95144 RefSeq:NP_345712.1
ProteinModelPortal:Q97QG7 EnsemblBacteria:EBSTRT00000025640
GeneID:931760 KEGG:spn:SP_1247 PATRIC:19706887
ProtClustDB:CLSK877065 Uniprot:Q97QG7
Length = 1179
Score = 117 (46.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 61/320 (19%), Positives = 124/320 (38%)
Query: 63 KNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVF 122
K + E+ + +E L N + + + E+ + + + + +E V + V
Sbjct: 337 KEKSDKESSLALLEGNLVQNNQKLNRLEAELLAFSDDPDQMIELLRERFVALLQEEADVS 396
Query: 123 SAKTRFECDIAKSELEIFLSTQSKETKKLAD-LEANLEKVQTTLTERKTLCEELTTRVPA 181
+ TR E ++ S Q+ + +KL + L EK E +T E++ +
Sbjct: 397 NQLTRIENELENSRQ--LSQKQADQLEKLKEQLAIAKEKASQQKEELETAKEQVQKLLAD 454
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQ-LKSE 240
++ E + ++++L D+++ L + + + R+++ V L+ +
Sbjct: 455 YQAIAKEQEEQKTSYQAQQSQLFDRLDNLKNKQARAQSLENILRNHSNFYAGVKSVLQEK 514
Query: 241 NRVSXXXXXXXXXXXXXQKYDIAVSTACGALN-YIVTETVEAGEAVIAAVKRQNVGRVNV 299
+R+ Y A+ A GA + +I+ E E+ I +KR GR
Sbjct: 515 DRLGGIIGAVSEHLTFDVYYQTALEIALGASSQHIIVEDEESATKAIDFLKRNRAGRATF 574
Query: 300 IPLD--KMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAK 357
+PL K + SQ D + D + D ++ F T + + A+
Sbjct: 575 LPLTTIKARTISSQNQDAIAVSPGFLGMADELVTFDTRLEAIFKNLLATTAIFDTVEHAR 634
Query: 358 ----RIGYSGGGYRMVTLEG 373
++ Y RMVTL+G
Sbjct: 635 AAARQVRYQ---VRMVTLDG 651
Score = 61 (26.5 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 22/98 (22%), Positives = 42/98 (42%)
Query: 424 AKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEVKEK 483
A+++ Y RMVTL+G + G+ +GG + + + L K++ +E
Sbjct: 637 ARQVRYQ---VRMVTLDGTELRTGGSYAGGANRQNNSIFIKPEL----EQLQKEIAEEEA 689
Query: 484 RLASLETELRILSQQKMEVETQLNCT---GNELKYKKQ 518
L S E L+ L + + L G + + ++Q
Sbjct: 690 SLGSEEATLKTLQDEMARLTESLEAIKSQGEQARIQEQ 727
>UNIPROTKB|F1N6C8 [details] [associations]
symbol:SMC1B "Structural maintenance of chromosomes
protein" species:9913 "Bos taurus" [GO:0034991 "nuclear meiotic
cohesin complex" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
[GO:0007062 "sister chromatid cohesion" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000800 "lateral element"
evidence=IEA] [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0030261 "chromosome condensation" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0006281 "DNA
repair" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0007126 GO:GO:0000775 GO:GO:0003677
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0000800
GO:GO:0007062 SUPFAM:SSF75553 GO:GO:0030893
GeneTree:ENSGT00580000081569 OMA:QLYHNEK EMBL:DAAA02014929
EMBL:DAAA02014930 IPI:IPI00697785 ProteinModelPortal:F1N6C8
PRIDE:F1N6C8 Ensembl:ENSBTAT00000014005 Uniprot:F1N6C8
Length = 1235
Score = 125 (49.1 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 79/399 (19%), Positives = 162/399 (40%)
Query: 18 RVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERY-VNMKNLGEHETKVQQME 76
++Q + +LK+LE L + + ++ K N + ++ + K++ + E + + E
Sbjct: 276 QLQQTQKELKSLEALLNQ-----KRPQYIKAKENTSHHLKKLDMAKKSIKDSEKQCSKQE 330
Query: 77 QELTANLESIKKCTDEMESAKSELKTVEK----KGKESNV-IGSKFRWSVFSAKTRFECD 131
++ A LE+ + D + +S K +E+ KG++ + G ++ + R +
Sbjct: 331 DDIKA-LET--ELADLDGAWRSFEKQIEEEMLHKGRDIELEAGQLVQYKELKEQVRKKVA 387
Query: 132 IAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRA 191
I +LE Q + ++ A + +VQ + + K E+ R+ +E
Sbjct: 388 IMTQQLEKLQWEQRSDEERWAFEKRRHGEVQENIKQIKEQIEDHKKRIEKLEEYTKTCTN 447
Query: 192 RLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN--NRLIDFVMQLKSENRV------ 243
L + +E L++++EK +SE E + RS N ID + + R
Sbjct: 448 CLKEKKEQEENLVNEIEKTKSRMSEVNEELNLIRSELQNAGIDTHEGKRQQKRAEILEHL 507
Query: 244 ------SXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAAVKRQNVGR 296
S +KY +AV+ G + IV + + + I +K +
Sbjct: 508 KRLYPDSVFGRLLDLCHPIHKKYQLAVTKLFGRYMVAIVVASEKVAKDCIRFLKEERAEP 567
Query: 297 VNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQA 356
+ LD + ++ R + +ID+I+ Q +++ F LV + L +A
Sbjct: 568 ETFLALDYLDI--KPINERLREIKGCKMMIDVIKTQFPQLKKVIQFVCGNGLVCETLEEA 625
Query: 357 KRIGYSGGGYRM-VTLEGAIIEPSETLV--AQDLNQAKR 392
+ I ++G R V L+G + S + + DL R
Sbjct: 626 RHIAFAGPERRKTVALDGTLFLKSGVISGGSSDLKSKAR 664
Score = 53 (23.7 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 17/60 (28%), Positives = 30/60 (50%)
Query: 444 IEPSGTMSGG----GSNPIRGLMGRKATVSTD-TSLVKDLEVKEKRLASLETELRILSQQ 498
+E G S G G+ + ++A + D +SL +DL+ + +E +LR+L QQ
Sbjct: 953 VEEGGKASSGTEAEGTQATTDIYEKEAAIEVDYSSLREDLKALQSD-KEIEAQLRLLLQQ 1011
Score = 47 (21.6 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 12/43 (27%), Positives = 23/43 (53%)
Query: 477 DLEV-KEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
+LE+ K+K LA+ E L + + +E+Q +K ++Q
Sbjct: 718 ELEIIKKKHLAAFYREQSQLQSELLNIESQCAMLSEGIKERQQ 760
>MGI|MGI:1339713 [details] [associations]
symbol:Myh4 "myosin, heavy polypeptide 4, skeletal muscle"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006936 "muscle
contraction" evidence=ISO] [GO:0008152 "metabolic process"
evidence=IEA] [GO:0014823 "response to activity" evidence=IDA]
[GO:0016459 "myosin complex" evidence=IEA] [GO:0030016 "myofibril"
evidence=ISO] [GO:0032982 "myosin filament" evidence=IEA]
Reactome:REACT_88307 InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 MGI:MGI:1339713 GO:GO:0005524 Reactome:REACT_147847
GO:GO:0014823 GO:GO:0030016 GO:GO:0006936 GO:GO:0003774
eggNOG:COG5022 GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352
InterPro:IPR015650 PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959
GeneTree:ENSGT00680000099790 OrthoDB:EOG43N7BR EMBL:AL596129
CTD:4622 OMA:NTQGMLK EMBL:BC141362 IPI:IPI00404837
RefSeq:NP_034985.2 UniGene:Mm.297382 ProteinModelPortal:Q5SX39
SMR:Q5SX39 STRING:Q5SX39 PhosphoSite:Q5SX39 UCD-2DPAGE:Q5SX39
PaxDb:Q5SX39 PRIDE:Q5SX39 Ensembl:ENSMUST00000018632
Ensembl:ENSMUST00000170942 GeneID:17884 KEGG:mmu:17884
UCSC:uc007jmg.1 InParanoid:Q5SX39 NextBio:292693 Bgee:Q5SX39
CleanEx:MM_MYH4 Genevestigator:Q5SX39 GermOnline:ENSMUSG00000057003
Uniprot:Q5SX39
Length = 1939
Score = 127 (49.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 50/220 (22%), Positives = 107/220 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 961 LELTLAKVEKEKHATENKVKNLTEEMAGLDENIAKLTKEKKALQEAHQQTLDDLQAEEDK 1020
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1021 VN--TLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTM------- 1071
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + + + K E E+ + QSK + D +A ++Q + E + EEL +
Sbjct: 1072 DIENDKQQLDEKLKKKEFEMS-NLQSK----IEDEQALGMQLQKKIKELQARIEELEEEI 1126
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
A + A++ + +DL+RE ++ +++E+ S + E
Sbjct: 1127 EAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE 1166
Score = 55 (24.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/109 (22%), Positives = 49/109 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMG-RK-------ATVSTDT 472
L++A+++ GG ++ LE + E + I + G RK T T+
Sbjct: 1801 LDEAEQLALKGGKKQIQKLEARVRELENEVENEQKRNIEAVKGLRKHERRVKELTYQTEE 1860
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
L +++ + L+T+++ +Q E E Q N N K++K +++
Sbjct: 1861 DRKNVLRLQDL-VDKLQTKVKAYKRQAEEAEEQSNV--NLAKFRKIQHE 1906
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K ++ E R+ LE E+ ++QK +E +E + K+ Y T
Sbjct: 1814 KQIQKLEARVRELENEVE--NEQKRNIEAVKGLRKHERRVKELTYQT 1858
>UNIPROTKB|F1LMU0 [details] [associations]
symbol:Myh4 "Myosin-4" species:10116 "Rattus norvegicus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0006936 "muscle contraction" evidence=IEA]
[GO:0014823 "response to activity" evidence=IEA] [GO:0016459
"myosin complex" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:3139 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
InterPro:IPR015650 PANTHER:PTHR13140:SF22 IPI:IPI00476111
Ensembl:ENSRNOT00000045718 ArrayExpress:F1LMU0 Uniprot:F1LMU0
Length = 1939
Score = 127 (49.8 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 50/220 (22%), Positives = 107/220 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 961 LELTLAKVEKEKHATENKVKNLTEEMAGLDENIAKLTKEKKALQEAHQQTLDDLQAEEDK 1020
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1021 VN--TLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTM------- 1071
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + + + K E E+ + QSK + D +A ++Q + E + EEL +
Sbjct: 1072 DIENDKQQLDEKLKKKEFEMS-NLQSK----IEDEQALGMQLQKKIKELQARIEELEEEI 1126
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
A + A++ + +DL+RE ++ +++E+ S + E
Sbjct: 1127 EAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE 1166
Score = 55 (24.4 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 24/109 (22%), Positives = 49/109 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMG-RK-------ATVSTDT 472
L++A+++ GG ++ LE + E + I + G RK T T+
Sbjct: 1801 LDEAEQLALKGGKKQIQKLEARVRELENEVENEQKRNIEAVKGLRKHERRVKELTYQTEE 1860
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
L +++ + L+T+++ +Q E E Q N N K++K +++
Sbjct: 1861 DRKNVLRLQDL-VDKLQTKVKAYKRQAEEAEEQSNV--NLAKFRKIQHE 1906
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K ++ E R+ LE E+ ++QK +E +E + K+ Y T
Sbjct: 1814 KQIQKLEARVRELENEVE--NEQKRNIEAVKGLRKHERRVKELTYQT 1858
>UNIPROTKB|E1C523 [details] [associations]
symbol:E1C523 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003774 "motor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00650000092896 InterPro:IPR015650
PANTHER:PTHR13140:SF22 EMBL:AADN02019433 EMBL:AADN02019434
EMBL:AADN02019435 IPI:IPI00601289 Ensembl:ENSGALT00000012499
ArrayExpress:E1C523 Uniprot:E1C523
Length = 1898
Score = 122 (48.0 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 53/243 (21%), Positives = 108/243 (44%)
Query: 7 KYDEERTEKLTRV---QLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMK 63
K D E ++ +R+ Q+ E L+ EL+ + LE E +R + +R +
Sbjct: 1092 KKDFEMSQLNSRIEDQQVTEAQLQKKIKELQARIEELEEELEAERAARAKVEKQRAEVSR 1151
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELK--TVEKKGKESNVIGSKFRWSV 121
L E ++++ +A LE KK E + +L+ T++ + + + K SV
Sbjct: 1152 ELEELSERLEEAGGATSAQLEMNKKREVEFLKLRRDLEEATLQHESTAA-ALRKKHADSV 1210
Query: 122 FSAKTRFE-CDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVP 180
+ + K +LE +S+ ++ DL +N+E + + LC ++
Sbjct: 1211 AELSEQIDNLQRVKQKLE---KEKSEMKMEVDDLSSNIEYLTKNKANAEKLCRTYEDQLS 1267
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM-QTSRSNNRLIDFVMQLKS 239
+S++ E + +L D++ + +L + +L+R + EK + Q SR R + +LK
Sbjct: 1268 EAKSKVDELQRQLTDVSTQRGRLQTENGELSRLLEEKESFINQLSRGKTRFTQTIEELKR 1327
Query: 240 ENR 242
+ R
Sbjct: 1328 QLR 1330
Score = 60 (26.2 bits), Expect = 0.00016, Sum P(2) = 0.00016
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMS------GGGSNPIRGLMGRKATVSTDTSL 474
L++A++I GG ++ LE + E G + IR R +S T
Sbjct: 1762 LDEAEQIALKGGKKQIQKLEARVRELEGELDTEQKKMAEAQKGIRKYERRIKELSYQTEE 1821
Query: 475 V-KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K+L + + L+++++ +Q E E Q N N +KY+K +++
Sbjct: 1822 DRKNLTRMQDLIDKLQSKVKSYKRQFEEAEQQAN--SNLVKYRKVQHE 1867
>UNIPROTKB|P13535 [details] [associations]
symbol:MYH8 "Myosin-8" species:9606 "Homo sapiens"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0032982
"myosin filament" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] [GO:0006936 "muscle contraction" evidence=NAS]
[GO:0005859 "muscle myosin complex" evidence=NAS] [GO:0008307
"structural constituent of muscle" evidence=NAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0030049 "muscle filament sliding"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 GO:GO:0005829 GO:GO:0005524 GO:GO:0005730
GO:GO:0005925 GO:GO:0030016 Reactome:REACT_17044 GO:GO:0030049
GO:GO:0008307 GO:GO:0003774 Orphanet:1359 GO:GO:0005859
GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352 InterPro:IPR015650
PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959 OrthoDB:EOG43N7BR
HPA:HPA001349 HPA:HPA001239 CTD:4626 OMA:QLKRNHT EMBL:M36769
EMBL:Z38133 EMBL:X51592 EMBL:AF067143 IPI:IPI00302329 PIR:I38055
RefSeq:NP_002463.2 UniGene:Hs.700484 ProteinModelPortal:P13535
SMR:P13535 IntAct:P13535 STRING:P13535 PhosphoSite:P13535
DMDM:3041707 PRIDE:P13535 DNASU:4626 Ensembl:ENST00000403437
GeneID:4626 KEGG:hsa:4626 UCSC:uc002gmm.2 GeneCards:GC17M010293
H-InvDB:HIX0039253 HGNC:HGNC:7578 HPA:CAB016527 MIM:158300
MIM:160741 MIM:608837 neXtProt:NX_P13535 Orphanet:3377
PharmGKB:PA31376 InParanoid:P13535 PhylomeDB:P13535 GenomeRNAi:4626
NextBio:17806 Bgee:P13535 CleanEx:HS_MYH8 Genevestigator:P13535
GermOnline:ENSG00000133020 Uniprot:P13535
Length = 1937
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 50/220 (22%), Positives = 106/220 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 960 LELTLAKVEKEKHATENKVKNLTEEMAGLDETIAKLSKEKKALQETHQQTLDDLQAEEDK 1019
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN+ L + +TK++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1020 VNI--LTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTM------- 1070
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + + + K E EI S K+ D +A ++Q + E + EEL +
Sbjct: 1071 DMENDKQQLDEKLEKKEFEI-----SNLISKIEDEQAVEIQLQKKIKELQARIEELGEEI 1125
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
A + A++ + +DL+RE ++ +++E+ S + E
Sbjct: 1126 EAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQVE 1165
Score = 58 (25.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 21/106 (19%), Positives = 47/106 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGG---GSNPIRGLMGRKATVSTDTSLVKD 477
L++A+++ GG ++ LE + E G + + ++GL + V T ++
Sbjct: 1800 LDEAEQLALKGGKKQIQKLEARVRELEGEVENEQKRNAEAVKGLRKHERRVKELTYQTEE 1859
Query: 478 LEVKEKRLASLETEL--RILSQQKMEVETQLNCTGNELKYKKQEYD 521
RL L +L ++ S ++ E + N K++K +++
Sbjct: 1860 DRKNVLRLQDLVDKLQAKVKSYKRQAEEAEEQSNANLSKFRKLQHE 1905
Score = 52 (23.4 bits), Expect = 0.00068, Sum P(2) = 0.00068
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 464 RKATVSTDTSLVKDLEVKEKRLASLET---ELRILSQQKMEVETQLNCTGNEL----KYK 516
+K + S T L K V E+ L LET E + L Q+ ++ Q+ G ++ K K
Sbjct: 1474 QKESRSLSTELFKVKNVYEESLDQLETLRRENKNLQQEISDLTEQIAEGGKQIHELEKIK 1533
Query: 517 KQ-EYDTCLI 525
KQ E + C I
Sbjct: 1534 KQVEQEKCEI 1543
>RGD|62029 [details] [associations]
symbol:Myh6 "myosin, heavy chain 6, cardiac muscle, alpha"
species:10116 "Rattus norvegicus" [GO:0000146 "microfilament motor
activity" evidence=IEA;ISO;IMP] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0001725 "stress fiber"
evidence=IEA;ISO] [GO:0002026 "regulation of the force of heart
contraction" evidence=IEA;ISO] [GO:0002027 "regulation of heart
rate" evidence=IEA;ISO] [GO:0003779 "actin binding" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0005859 "muscle myosin complex" evidence=IDA]
[GO:0005925 "focal adhesion" evidence=IEA;ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IMP] [GO:0006936 "muscle
contraction" evidence=ISO;IMP] [GO:0006941 "striated muscle
contraction" evidence=IEA;ISO] [GO:0007512 "adult heart development"
evidence=IEA;ISO] [GO:0007522 "visceral muscle development"
evidence=IEA;ISO] [GO:0008016 "regulation of heart contraction"
evidence=ISO] [GO:0008217 "regulation of blood pressure"
evidence=IEA;ISO] [GO:0008307 "structural constituent of muscle"
evidence=IEA;ISO] [GO:0016459 "myosin complex" evidence=IEA;ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=IEA;ISO] [GO:0030016 "myofibril"
evidence=ISO;IDA] [GO:0030018 "Z disc" evidence=IEA;ISO] [GO:0030048
"actin filament-based movement" evidence=ISO] [GO:0030049 "muscle
filament sliding" evidence=IEA;ISO] [GO:0030239 "myofibril assembly"
evidence=ISO] [GO:0030509 "BMP signaling pathway" evidence=IEA;ISO]
[GO:0030898 "actin-dependent ATPase activity" evidence=IEA;ISO]
[GO:0030899 "calcium-dependent ATPase activity" evidence=IMP]
[GO:0032982 "myosin filament" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043462 "regulation of
ATPase activity" evidence=IEA;ISO] [GO:0045214 "sarcomere
organization" evidence=IEA;ISO] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0048739 "cardiac
muscle fiber development" evidence=IEA;ISO] [GO:0055009 "atrial
cardiac muscle tissue morphogenesis" evidence=IEA;ISO] [GO:0055010
"ventricular cardiac muscle tissue morphogenesis" evidence=IEA;ISO]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA;ISO] [GO:0060420 "regulation of heart growth"
evidence=IEA;ISO] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:62029 GO:GO:0005524 GO:GO:0005634 GO:GO:0042803
GO:GO:0030018 GO:GO:0001701 GO:GO:0005925 GO:GO:0030016
GO:GO:0008217 GO:GO:0006936 GO:GO:0000146 GO:GO:0001725
GO:GO:0030049 GO:GO:0045214 GO:GO:0043462 GO:GO:0008307
GO:GO:0030509 GO:GO:0046982 GO:GO:0007512 GO:GO:0002026
GO:GO:0006941 GO:GO:0002027 GO:GO:0060070 GO:GO:0030899
eggNOG:COG5022 GO:GO:0007522 GO:GO:0055009 GO:GO:0055010
GO:GO:0048739 GO:GO:0060420 GO:GO:0005859 GO:GO:0030898
GO:GO:0032982 HOVERGEN:HBG004704 HOGENOM:HOG000173959
OrthoDB:EOG42JNQH EMBL:X15938 EMBL:K01464 EMBL:J00751 EMBL:M32697
IPI:IPI00189809 PIR:S06005 UniGene:Rn.54399
ProteinModelPortal:P02563 SMR:P02563 MINT:MINT-348910 STRING:P02563
PhosphoSite:P02563 PRIDE:P02563 UCSC:RGD:62029 InParanoid:P02563
Genevestigator:P02563 GermOnline:ENSRNOG00000025757 Uniprot:P02563
Length = 1938
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 53/227 (23%), Positives = 109/227 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 958 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 1017
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1018 VN--TLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIM------- 1068
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + E + K E +I S++ K+ D +A ++Q L E + EEL +
Sbjct: 1069 DLENDKLQLEEKLKKKEFDI-----SQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 1123
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAR------EVSEKRES 220
A + A+ +DLTRE ++ +++E+ E+++KRE+
Sbjct: 1124 EAERTARAKVEKLRSDLTRELEEISERLEEAGGATSVQIEMNKKREA 1170
Score = 58 (25.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/106 (17%), Positives = 44/106 (41%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1798 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1857
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1858 DKKNLVRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1903
Score = 53 (23.7 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1811 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1855
>UNIPROTKB|P02563 [details] [associations]
symbol:Myh6 "Myosin-6" species:10116 "Rattus norvegicus"
[GO:0003779 "actin binding" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 RGD:62029 GO:GO:0005524
GO:GO:0005634 GO:GO:0042803 GO:GO:0030018 GO:GO:0001701
GO:GO:0005925 GO:GO:0030016 GO:GO:0008217 GO:GO:0006936
GO:GO:0000146 GO:GO:0001725 GO:GO:0030049 GO:GO:0045214
GO:GO:0043462 GO:GO:0008307 GO:GO:0030509 GO:GO:0046982
GO:GO:0007512 GO:GO:0002026 GO:GO:0006941 GO:GO:0002027
GO:GO:0060070 GO:GO:0030899 eggNOG:COG5022 GO:GO:0007522
GO:GO:0055009 GO:GO:0055010 GO:GO:0048739 GO:GO:0060420
GO:GO:0005859 GO:GO:0030898 GO:GO:0032982 HOVERGEN:HBG004704
HOGENOM:HOG000173959 OrthoDB:EOG42JNQH EMBL:X15938 EMBL:K01464
EMBL:J00751 EMBL:M32697 IPI:IPI00189809 PIR:S06005 UniGene:Rn.54399
ProteinModelPortal:P02563 SMR:P02563 MINT:MINT-348910 STRING:P02563
PhosphoSite:P02563 PRIDE:P02563 UCSC:RGD:62029 InParanoid:P02563
Genevestigator:P02563 GermOnline:ENSRNOG00000025757 Uniprot:P02563
Length = 1938
Score = 124 (48.7 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 53/227 (23%), Positives = 109/227 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 958 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 1017
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1018 VN--TLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIM------- 1068
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + E + K E +I S++ K+ D +A ++Q L E + EEL +
Sbjct: 1069 DLENDKLQLEEKLKKKEFDI-----SQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 1123
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAR------EVSEKRES 220
A + A+ +DLTRE ++ +++E+ E+++KRE+
Sbjct: 1124 EAERTARAKVEKLRSDLTRELEEISERLEEAGGATSVQIEMNKKREA 1170
Score = 58 (25.5 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 19/106 (17%), Positives = 44/106 (41%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1798 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1857
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1858 DKKNLVRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1903
Score = 53 (23.7 bits), Expect = 0.00054, Sum P(2) = 0.00054
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1811 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1855
>UNIPROTKB|E1C357 [details] [associations]
symbol:E1C357 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003774 "motor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00650000092896 InterPro:IPR015650
PANTHER:PTHR13140:SF22 OMA:AELQPMN EMBL:AADN02019433
EMBL:AADN02019434 EMBL:AADN02019435 IPI:IPI00818602
Ensembl:ENSGALT00000004997 ArrayExpress:E1C357 Uniprot:E1C357
Length = 1938
Score = 122 (48.0 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 48/225 (21%), Positives = 105/225 (46%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ AL+ + K + L+ Q+ +++ E
Sbjct: 966 LEITLAKVEKEKHATENKVKNLIEEMAALDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 1025
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + + K++Q +L ++LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1026 VN--TLTKAKVKLEQQVDDLESSLEQEKKIRMDLERAKRKLEGDLKLTQESVMDLENDKQ 1083
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE S +E T+++ KK+ +L+A +E+++ L + ++
Sbjct: 1084 QLEEKLKKKDFEMSQLNSRIEDQQVTEAQLQKKIKELQARIEELEEELEAERAARAKVEK 1143
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ 222
+ + E+ E RL + + L+ +K E + R ++
Sbjct: 1144 QRAEVSRELEELSERLEEAGGATSAQLEMNKKREVEFLKLRRDLE 1188
Score = 60 (26.2 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 26/108 (24%), Positives = 49/108 (45%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMS------GGGSNPIRGLMGRKATVSTDTSL 474
L++A++I GG ++ LE + E G + IR R +S T
Sbjct: 1802 LDEAEQIALKGGKKQIQKLEARVRELEGELDTEQKKMAEAQKGIRKYERRIKELSYQTEE 1861
Query: 475 V-KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K+L + + L+++++ +Q E E Q N N +KY+K +++
Sbjct: 1862 DRKNLTRMQDLIDKLQSKVKSYKRQFEEAEQQAN--SNLVKYRKVQHE 1907
>UNIPROTKB|E7EWT6 [details] [associations]
symbol:CALCOCO1 "Calcium-binding and coiled-coil
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] GO:GO:0043231
GO:GO:0005737 InterPro:IPR012852 Pfam:PF07888 HGNC:HGNC:29306
EMBL:AC076968 IPI:IPI00792755 Ensembl:ENST00000413257
ArrayExpress:E7EWT6 Bgee:E7EWT6 Uniprot:E7EWT6
Length = 629
Score = 119 (46.9 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 52/239 (21%), Positives = 103/239 (43%)
Query: 13 TEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKV 72
TE +RVQ +E +AL ++ +E + R H EI + ER + + G+H ++
Sbjct: 113 TELRSRVQELE---RALATARQEHTELMEQYKGISRSHGEITE-ERDILSRQQGDHVARI 168
Query: 73 QQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDI 132
++E ++ E + E++ + +K + ++ + ++G ++ E +
Sbjct: 169 LELEDDIQTISEKVLTKEVELDRLRDTVKALTRE--QEKLLGQLKEVQADKEQSEAELQV 226
Query: 133 AKSE---LEIFLST-------QSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
A+ E L + L QS + ++L D A ++ +R E L ++
Sbjct: 227 AQQENHHLNLDLKEAKSWQEEQSAQAQRLKDKVAQMKDTLGQAQQRVAELEPLKEQLRGA 286
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSE-KRESMQTSRSNNRLIDFVMQLKSE 240
+ E+A S + A L EE L R ++E R ++ + N RL + + LK E
Sbjct: 287 Q-ELAASSQQKATLLGEE--LASAAAARDRTIAELHRSRLEVAEVNGRLAELGLHLKEE 342
Score = 52 (23.4 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
D+SLV+ L ++ L L + LR+L ++K +++ +
Sbjct: 397 DSSLVQ-LSESKRELTELRSALRVLQKEKEQLQEE 430
>UNIPROTKB|E1C2P9 [details] [associations]
symbol:KTN1 "Kinectin" species:9031 "Gallus gallus"
[GO:0007018 "microtubule-based movement" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] InterPro:IPR024854 GO:GO:0007018
PANTHER:PTHR18864 GeneTree:ENSGT00530000063895 EMBL:AADN02003972
IPI:IPI00572175 Ensembl:ENSGALT00000004057 ArrayExpress:E1C2P9
Uniprot:E1C2P9
Length = 1325
Score = 126 (49.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 67/246 (27%), Positives = 116/246 (47%)
Query: 10 EERTEKL-TRVQLVETDLKALEPELRKAVNFL----ELENCVQRKHNEIYQYERYVNMKN 64
EE + L T + +L++L+ +L + V+F EL+ + K +I E + +
Sbjct: 765 EEELKVLRTENSSLRKELQSLQIQLSEQVSFQSLVDELQKVIHEKDGKIKSVEELLQAEI 824
Query: 65 L--GEHETKVQQMEQELTANLESIKKCTDEME---SAKSELKTVEK--KGKESNVIGSKF 117
L E VQ + Q++ A E + EME S S++K ++ KGKE+ V
Sbjct: 825 LKVANKEKTVQALTQKIEALKEEVGNSQLEMEKQVSITSQVKELQTLLKGKENQV----- 879
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANL-EKVQTTLTERKTLCEELT 176
KT E + + E EI + ++ K D A L KVQ E++ L ++L
Sbjct: 880 -------KT-MEALLEEKEKEIV--QKGEQLKGQQDTVAQLTSKVQEL--EQQNL-QQLQ 926
Query: 177 TRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDF-VM 235
+VPA S++ + +RL + +KL +E+ RE++ + + +QT +S N +
Sbjct: 927 -QVPAA-SQVQDLESRLRGEEEQISKLKAVLEEKEREIASQVKQLQTMQSENESFKVQIQ 984
Query: 236 QLKSEN 241
+LK EN
Sbjct: 985 ELKQEN 990
Score = 52 (23.4 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVET---QLNCTGNELKYKKQEYDTCLIDVKSPK 531
K+L+ +ASLE E+ L ++ EVET + +EL+ + E T + +V+ K
Sbjct: 1179 KELKQMRSSVASLEHEVERLKEEIKEVETLKKEREHLESELEKAEIERSTYVSEVRELK 1237
Score = 46 (21.3 bits), Expect = 0.00075, Sum P(2) = 0.00075
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 464 RKATVSTDTS-LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
++A+++ + L++ + KEK +ASL+ EL + E + + N E +K E
Sbjct: 992 KQASLAVQSEELLQVVAGKEKEIASLQNELAC-QRNAFEQQRKKNNDLREKNWKAME 1047
>UNIPROTKB|P49454 [details] [associations]
symbol:CENPF "Centromere protein F" species:9606 "Homo
sapiens" [GO:0006260 "DNA replication" evidence=IEA] [GO:0007517
"muscle organ development" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0051301 "cell division"
evidence=IEA] [GO:0045120 "pronucleus" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0000922 "spindle pole" evidence=IDA] [GO:0000085 "G2 phase of
mitotic cell cycle" evidence=IMP] [GO:0000087 "M phase of mitotic
cell cycle" evidence=IMP;IDA;TAS] [GO:0000775 "chromosome,
centromeric region" evidence=IDA] [GO:0000940 "condensed chromosome
outer kinetochore" evidence=IDA;TAS] [GO:0000278 "mitotic cell
cycle" evidence=IMP;TAS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0007059 "chromosome segregation"
evidence=IMP;NAS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0051382
"kinetochore assembly" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007094 "mitotic spindle assembly checkpoint"
evidence=NAS] [GO:0051310 "metaphase plate congression"
evidence=IDA] [GO:0045502 "dynein binding" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0042493 "response to drug"
evidence=NAS] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0000785 "chromatin" evidence=NAS] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0042803 "protein homodimerization
activity" evidence=IPI] [GO:0016363 "nuclear matrix" evidence=IDA]
[GO:0015031 "protein transport" evidence=IMP;IDA] [GO:0010389
"regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016202 "regulation of striated muscle tissue development"
evidence=ISS] [GO:0005819 "spindle" evidence=IDA] [GO:0030496
"midbody" evidence=IDA] [GO:0000236 "mitotic prometaphase"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
InterPro:IPR019513 Pfam:PF10473 GO:GO:0005829 GO:GO:0005635
GO:GO:0048471 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0030154
Reactome:REACT_21300 GO:GO:0051301 GO:GO:0007094 GO:GO:0042493
GO:GO:0015031 GO:GO:0008283 GO:GO:0006260 GO:GO:0000085
GO:GO:0003682 GO:GO:0007517 eggNOG:NOG12793 GO:GO:0030496
GO:GO:0016363 GO:GO:0000922 GO:GO:0010389 GO:GO:0051382
Pathway_Interaction_DB:foxm1pathway GO:GO:0000236 GO:GO:0045502
GO:GO:0045120 GO:GO:0000940 EMBL:U19769 EMBL:U30872 EMBL:AL445666
EMBL:AL445305 EMBL:BC172232 EMBL:U25725 IPI:IPI00855998 PIR:PC4035
RefSeq:NP_057427.3 UniGene:Hs.497741 ProteinModelPortal:P49454
SMR:P49454 IntAct:P49454 MINT:MINT-2803614 STRING:P49454
PhosphoSite:P49454 DMDM:156630875 PaxDb:P49454 PRIDE:P49454
Ensembl:ENST00000366955 GeneID:1063 KEGG:hsa:1063 UCSC:uc001hkm.3
CTD:1063 GeneCards:GC01P214776 H-InvDB:HIX0028827 HGNC:HGNC:1857
HPA:CAB009581 MIM:600236 neXtProt:NX_P49454 PharmGKB:PA26401
HOVERGEN:HBG050893 KO:K11499 ChiTaRS:CENPF GenomeRNAi:1063
NextBio:4446 Bgee:P49454 CleanEx:HS_CENPF Genevestigator:P49454
GO:GO:0051310 GO:GO:0016202 InterPro:IPR018463 InterPro:IPR018302
Pfam:PF10481 Pfam:PF10490 Uniprot:P49454
Length = 3210
Score = 119 (46.9 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 51/235 (21%), Positives = 108/235 (45%)
Query: 20 QLVETDLKALEPEL-RKAVNFLELEN-CVQRKHNEIYQYERYVNMKNLGEHET-KVQQME 76
Q ++ K + EL R+ +F L+ C+Q K + ++ NM N+ + E K+ ++
Sbjct: 387 QKIKEKEKEFQEELSRQQRSFQTLDQECIQMKARLTQELQQAKNMHNVLQAELDKLTSVK 446
Query: 77 QELTANLESIKK--CTDEMESAKSELK------TVEKKGKESNVIGSKFRWSVFSAKTRF 128
Q+L NLE K+ C E S++K ++E+ KE+N++ S K R
Sbjct: 447 QQLENNLEEFKQKLCRAEQAFQASQIKENELRRSMEEMKKENNLLKSHSE-----QKARE 501
Query: 129 ECDIAKSELEIFLSTQSKETKKLADLEANL-EKVQTTLTERKTLCEELTTRVPAMESEIA 187
C + E E+ K K+ + N E+++ T ++T+ +L ++ E+ +
Sbjct: 502 VCHL---EAEL------KNIKQCLNQSQNFAEEMKAKNTSQETMLRDLQEKINQQENSLT 552
Query: 188 ESRARLA--DLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSE 240
+ +LA DL ++ D ++K + + + + + ++ + ++LK +
Sbjct: 553 LEKLKLAVADLEKQRDCSQDLLKKREHHIEQLNDKLSKTEKESKALLSALELKKK 607
Score = 67 (28.6 bits), Expect = 0.00019, Sum P(2) = 0.00019
Identities = 17/41 (41%), Positives = 27/41 (65%)
Query: 467 TVSTDTS-LVKDLEVKEKRLASLETELRILSQQKMEVETQL 506
T+S+D S L+KD +++L SLE + + LS K E+E Q+
Sbjct: 2114 TLSSDVSELLKDKTHLQEKLQSLEKDSQALSLTKCELENQI 2154
Score = 61 (26.5 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 19/61 (31%), Positives = 28/61 (45%)
Query: 467 TVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVE---TQLNCTGNELKYKKQEYDTC 523
T +L+ LE+K+K L+ E + S K E E TQ+ L+ K +TC
Sbjct: 591 TEKESKALLSALELKKKEYEELKEEKTLFSCWKSENEKLLTQMESEKENLQSKINHLETC 650
Query: 524 L 524
L
Sbjct: 651 L 651
>UNIPROTKB|F1NF60 [details] [associations]
symbol:KTN1 "Kinectin" species:9031 "Gallus gallus"
[GO:0007018 "microtubule-based movement" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR024854 GO:GO:0005783 GO:GO:0007018
IPI:IPI00574217 PANTHER:PTHR18864 GeneTree:ENSGT00530000063895
EMBL:AADN02003972 Ensembl:ENSGALT00000019826 OMA:ENCKQAS
ArrayExpress:F1NF60 Uniprot:F1NF60
Length = 1368
Score = 126 (49.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 67/246 (27%), Positives = 116/246 (47%)
Query: 10 EERTEKL-TRVQLVETDLKALEPELRKAVNFL----ELENCVQRKHNEIYQYERYVNMKN 64
EE + L T + +L++L+ +L + V+F EL+ + K +I E + +
Sbjct: 769 EEELKVLRTENSSLRKELQSLQIQLSEQVSFQSLVDELQKVIHEKDGKIKSVEELLQAEI 828
Query: 65 L--GEHETKVQQMEQELTANLESIKKCTDEME---SAKSELKTVEK--KGKESNVIGSKF 117
L E VQ + Q++ A E + EME S S++K ++ KGKE+ V
Sbjct: 829 LKVANKEKTVQALTQKIEALKEEVGNSQLEMEKQVSITSQVKELQTLLKGKENQV----- 883
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANL-EKVQTTLTERKTLCEELT 176
KT E + + E EI + ++ K D A L KVQ E++ L ++L
Sbjct: 884 -------KT-MEALLEEKEKEIV--QKGEQLKGQQDTVAQLTSKVQEL--EQQNL-QQLQ 930
Query: 177 TRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDF-VM 235
+VPA S++ + +RL + +KL +E+ RE++ + + +QT +S N +
Sbjct: 931 -QVPAA-SQVQDLESRLRGEEEQISKLKAVLEEKEREIASQVKQLQTMQSENESFKVQIQ 988
Query: 236 QLKSEN 241
+LK EN
Sbjct: 989 ELKQEN 994
Score = 52 (23.4 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVET---QLNCTGNELKYKKQEYDTCLIDVKSPK 531
K+L+ +ASLE E+ L ++ EVET + +EL+ + E T + +V+ K
Sbjct: 1183 KELKQMRSSVASLEHEVERLKEEIKEVETLKKEREHLESELEKAEIERSTYVSEVRELK 1241
Score = 46 (21.3 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 464 RKATVSTDTS-LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
++A+++ + L++ + KEK +ASL+ EL + E + + N E +K E
Sbjct: 996 KQASLAVQSEELLQVVAGKEKEIASLQNELAC-QRNAFEQQRKKNNDLREKNWKAME 1051
>UNIPROTKB|F1P9J3 [details] [associations]
symbol:MYH9 "Myosin-9" species:9615 "Canis lupus
familiaris" [GO:0051295 "establishment of meiotic spindle
localization" evidence=IEA] [GO:0043534 "blood vessel endothelial
cell migration" evidence=IEA] [GO:0043531 "ADP binding"
evidence=IEA] [GO:0043495 "protein anchor" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0032796 "uropod organization" evidence=IEA] [GO:0032154
"cleavage furrow" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0031532 "actin cytoskeleton
reorganization" evidence=IEA] [GO:0030898 "actin-dependent ATPase
activity" evidence=IEA] [GO:0030863 "cortical cytoskeleton"
evidence=IEA] [GO:0030224 "monocyte differentiation" evidence=IEA]
[GO:0030220 "platelet formation" evidence=IEA] [GO:0030048 "actin
filament-based movement" evidence=IEA] [GO:0016460 "myosin II
complex" evidence=IEA] [GO:0016337 "cell-cell adhesion"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0008305 "integrin complex" evidence=IEA] [GO:0008180
"signalosome" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0007132 "meiotic metaphase I" evidence=IEA]
[GO:0006509 "membrane protein ectodomain proteolysis" evidence=IEA]
[GO:0005913 "cell-cell adherens junction" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005826 "actomyosin contractile ring"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0001931 "uropod" evidence=IEA]
[GO:0001772 "immunological synapse" evidence=IEA] [GO:0001768
"establishment of T cell polarity" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001525 "angiogenesis" evidence=IEA] [GO:0000910
"cytokinesis" evidence=IEA] [GO:0000212 "meiotic spindle
organization" evidence=IEA] [GO:0000146 "microfilament motor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0038032 "termination of G-protein coupled receptor signaling
pathway" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 InterPro:IPR016137
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005829
GO:GO:0005524 GO:GO:0005819 GO:GO:0008360 GO:GO:0030863
GO:GO:0015031 GO:GO:0001701 GO:GO:0031594 GO:GO:0043531
GO:GO:0001525 GO:GO:0005913 GO:GO:0000910 GO:GO:0031532
GO:GO:0000146 GO:GO:0001725 GO:GO:0001726 GO:GO:0016337
GO:GO:0005826 GO:GO:0006509 GO:GO:0007520 GO:GO:0043534
GO:GO:0038032 SUPFAM:SSF48097 GO:GO:0008180 GO:GO:0032154
GO:GO:0030048 GO:GO:0051295 GO:GO:0001772 GO:GO:0030224
GO:GO:0001768 GO:GO:0007132 GO:GO:0032796 GO:GO:0001931
GO:GO:0000212 GO:GO:0030220 GO:GO:0008305 GO:GO:0016460
GO:GO:0030898 GeneTree:ENSGT00650000092896 OMA:EMRQKHS
EMBL:AAEX03007348 Ensembl:ENSCAFT00000002643 Uniprot:F1P9J3
Length = 1960
Score = 133 (51.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 50/232 (21%), Positives = 106/232 (45%)
Query: 12 RTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETK 71
+ EK R L E +L+AL+ EL ++ + ++ K + + + HE +
Sbjct: 1129 KAEKQKR-DLGE-ELEALKTELEDTLDSTAAQQELRSKREQEVNILKKTLEEEARTHEAQ 1186
Query: 72 VQQMEQ-------ELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
+Q+M Q EL LE K+ +E AK L+ ++G+ +N + + S
Sbjct: 1187 IQEMRQKHSQAVEELAEQLEQTKRVKANLEKAKQTLEN--ERGELANEVKVLQQGKGDSE 1244
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLAD----LEANLEKVQTTLTERKTLCEELTTRVP 180
R + + EL++ + + +LAD L+ L+ V LT+ + +LT
Sbjct: 1245 HKRKKAEAQLQELQVKFTEGERVRTELADKVTKLQVELDNVMGLLTQSDSKSSKLTKDFS 1304
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
A+ES++ +++ L + R++ L +++++ E + +E ++ R ++
Sbjct: 1305 ALESQLQDTQELLQEENRQKLSLSTKLKQMEDEKNSFKEQLEEEEEAKRNLE 1356
Score = 48 (22.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 483 KRLASLETELRILSQQKMEVETQLNCTGNELK 514
K + LE R L QQ E++TQL +EL+
Sbjct: 1518 KSVHELEKSKRALEQQVEEMKTQLEELEDELQ 1549
Score = 48 (22.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 471 DTSLVKD-LEVKEKRLASLETEL---RILSQQKMEVETQLNCTGNELKYKKQEYD 521
+T LV D L+ ++ + T+L R +Q+ QL ELK K QE +
Sbjct: 1744 NTELVNDRLKKANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKVKLQEME 1798
Score = 42 (19.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCT 509
+S+ + K + EK +LE ++ + Q E+E +L T
Sbjct: 1510 MSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEELEDELQAT 1551
>UNIPROTKB|Q258K2 [details] [associations]
symbol:MYH9 "Myosin-9" species:9615 "Canis lupus
familiaris" [GO:0006200 "ATP catabolic process" evidence=ISS]
[GO:0043495 "protein anchor" evidence=ISS] [GO:0051015 "actin
filament binding" evidence=ISS] [GO:0043534 "blood vessel
endothelial cell migration" evidence=ISS] [GO:0043234 "protein
complex" evidence=ISS] [GO:0042803 "protein homodimerization
activity" evidence=ISS] [GO:0032154 "cleavage furrow" evidence=ISS]
[GO:0031532 "actin cytoskeleton reorganization" evidence=ISS]
[GO:0031252 "cell leading edge" evidence=ISS] [GO:0030224 "monocyte
differentiation" evidence=ISS] [GO:0030220 "platelet formation"
evidence=ISS] [GO:0030048 "actin filament-based movement"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0015629 "actin cytoskeleton" evidence=ISS] [GO:0015031 "protein
transport" evidence=ISS] [GO:0008360 "regulation of cell shape"
evidence=ISS] [GO:0008305 "integrin complex" evidence=ISS]
[GO:0006509 "membrane protein ectodomain proteolysis" evidence=ISS]
[GO:0005886 "plasma membrane" evidence=ISS] [GO:0005829 "cytosol"
evidence=ISS] [GO:0005826 "actomyosin contractile ring"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0001726 "ruffle" evidence=ISS]
[GO:0001725 "stress fiber" evidence=ISS] [GO:0001525 "angiogenesis"
evidence=ISS] [GO:0000910 "cytokinesis" evidence=ISS] [GO:0000146
"microfilament motor activity" evidence=ISS] [GO:0016459 "myosin
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0038032
"termination of G-protein coupled receptor signaling pathway"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 InterPro:IPR016137
Pfam:PF00063 Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0043234
GO:GO:0042803 GO:GO:0008360 GO:GO:0015031 GO:GO:0051015
GO:GO:0001525 GO:GO:0016887 GO:GO:0000910 GO:GO:0031532
GO:GO:0000146 GO:GO:0001725 GO:GO:0001726 GO:GO:0043495
GO:GO:0005826 GO:GO:0006509 GO:GO:0043534 GO:GO:0038032
SUPFAM:SSF48097 GO:GO:0032154 GO:GO:0030048 eggNOG:COG5022
GO:GO:0016459 GO:GO:0030224 GO:GO:0030220 HOGENOM:HOG000173958
HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1 EMBL:AM086385
RefSeq:NP_001104237.1 UniGene:Cfa.12211 HSSP:Q02440
ProteinModelPortal:Q258K2 STRING:Q258K2 PRIDE:Q258K2 GeneID:481280
KEGG:cfa:481280 CTD:4627 InParanoid:Q258K2 NextBio:20856124
Uniprot:Q258K2
Length = 1960
Score = 133 (51.9 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 50/232 (21%), Positives = 106/232 (45%)
Query: 12 RTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETK 71
+ EK R L E +L+AL+ EL ++ + ++ K + + + HE +
Sbjct: 1129 KAEKQKR-DLGE-ELEALKTELEDTLDSTAAQQELRSKREQEVNILKKTLEEEARTHEAQ 1186
Query: 72 VQQMEQ-------ELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
+Q+M Q EL LE K+ +E AK L+ ++G+ +N + + S
Sbjct: 1187 IQEMRQKHSQAVEELAEQLEQTKRVKANLEKAKQTLEN--ERGELANEVKVLQQGKGDSE 1244
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLAD----LEANLEKVQTTLTERKTLCEELTTRVP 180
R + + EL++ + + +LAD L+ L+ V LT+ + +LT
Sbjct: 1245 HKRKKAEAQLQELQVKFTEGERVRTELADKVTKLQVELDNVMGLLTQSDSKSSKLTKDFS 1304
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
A+ES++ +++ L + R++ L +++++ E + +E ++ R ++
Sbjct: 1305 ALESQLQDTQELLQEENRQKLSLSTKLKQMEDEKNSFKEQLEEEEEAKRNLE 1356
Score = 48 (22.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 483 KRLASLETELRILSQQKMEVETQLNCTGNELK 514
K + LE R L QQ E++TQL +EL+
Sbjct: 1518 KSVHELEKSKRALEQQVEEMKTQLEELEDELQ 1549
Score = 48 (22.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 471 DTSLVKD-LEVKEKRLASLETEL---RILSQQKMEVETQLNCTGNELKYKKQEYD 521
+T LV D L+ ++ + T+L R +Q+ QL ELK K QE +
Sbjct: 1744 NTELVNDRLKKANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKVKLQEME 1798
Score = 42 (19.8 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 11/42 (26%), Positives = 21/42 (50%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCT 509
+S+ + K + EK +LE ++ + Q E+E +L T
Sbjct: 1510 MSSKDDVGKSVHELEKSKRALEQQVEEMKTQLEELEDELQAT 1551
>UNIPROTKB|Q9TV62 [details] [associations]
symbol:MYH4 "Myosin-4" species:9823 "Sus scrofa"
[GO:0030016 "myofibril" evidence=IEA] [GO:0032982 "myosin filament"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0030016 GO:GO:0003774 eggNOG:COG5022
GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352 InterPro:IPR015650
PANTHER:PTHR13140:SF22 HSSP:P13538 UniGene:Ssc.15909 CTD:4622
EMBL:AB025261 RefSeq:NP_001116613.1 ProteinModelPortal:Q9TV62
SMR:Q9TV62 STRING:Q9TV62 PRIDE:Q9TV62 GeneID:100144306
KEGG:ssc:100144306 Uniprot:Q9TV62
Length = 1937
Score = 130 (50.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 50/220 (22%), Positives = 107/220 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 959 LELTLAKVEKEKHATENKVKNLTEEMAGLDENIAKLTKEKKALQEAHQQTLDDLQAEEDK 1018
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1019 VN--TLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTM------- 1069
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + + + K E E+ + QSK + D +A ++Q + E + EEL +
Sbjct: 1070 DIENDKQQLDEKLKKKEFEMS-NLQSK----IEDEQALAMQLQKKIKELQARTEELEEEI 1124
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
A + A++ + +DL+RE ++ +++E+ S + E
Sbjct: 1125 EAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE 1164
Score = 51 (23.0 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 14/47 (29%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K ++ E R+ LE E+ ++QK VE +E + K+ Y T
Sbjct: 1812 KQIQKLEARVRELENEVE--NEQKRNVEAVKGLRKHERRVKELTYQT 1856
Score = 50 (22.7 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 22/109 (20%), Positives = 49/109 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMG-RK-------ATVSTDT 472
L++A+++ GG ++ LE + E + + + G RK T T+
Sbjct: 1799 LDEAEQLALKGGKKQIQKLEARVRELENEVENEQKRNVEAVKGLRKHERRVKELTYQTEE 1858
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
L +++ + L+++++ +Q E E Q N N K++K +++
Sbjct: 1859 DRKNVLRLQDL-VDKLQSKVKAYKRQAEEAEEQSNV--NLSKFRKLQHE 1904
Score = 48 (22.0 bits), Expect = 0.00040, Sum P(2) = 0.00040
Identities = 19/70 (27%), Positives = 32/70 (45%)
Query: 438 TLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTS-LVKDLEVKEKRLASLETELRILS 496
TLE + E T I L +KA + T++ + L+ KE ++ L + +
Sbjct: 1253 TLEDQLSEVK-TKEEEHQRLINELSAQKARLQTESGEFSRQLDEKEALVSQLSRGKQAFT 1311
Query: 497 QQKMEVETQL 506
QQ E++ QL
Sbjct: 1312 QQIEELKRQL 1321
Score = 45 (20.9 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 15/43 (34%), Positives = 19/43 (44%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
+LE +K SL TEL + E QL E K +QE
Sbjct: 1468 ELEASQKESRSLSTELFKVKNAYEESLDQLETLKRENKNLQQE 1510
>UNIPROTKB|K7GMH0 [details] [associations]
symbol:K7GMH0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016459 "myosin complex" evidence=IEA] [GO:0003774
"motor activity" evidence=IEA] InterPro:IPR002928 Pfam:PF01576
GeneTree:ENSGT00690000102204 EMBL:CU633625
Ensembl:ENSSSCT00000036352 Uniprot:K7GMH0
Length = 1130
Score = 120 (47.3 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 52/227 (22%), Positives = 109/227 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 150 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 209
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 210 VN--TLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIM------- 260
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + E + K E EI +++ K+ D +A ++Q L E + EEL +
Sbjct: 261 DLENDKLQLEEKLKKKEFEI-----NQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 315
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAR------EVSEKRES 220
A + A+ +DL+RE ++ +++E+ E+++KRE+
Sbjct: 316 EAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 362
Score = 56 (24.8 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 19/106 (17%), Positives = 43/106 (40%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 990 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1049
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1050 DRKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1095
Score = 53 (23.7 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 15/47 (31%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K L+ E R+ LE EL ++QK E+ +E + K+ Y T
Sbjct: 1003 KQLQKLEARVRELENELE--AEQKRNAESVKGMRKSERRIKELTYQT 1047
>TIGR_CMR|DET_0549 [details] [associations]
symbol:DET_0549 "exonuclease SbcC, putative"
species:243164 "Dehalococcoides ethenogenes 195" [GO:0004527
"exonuclease activity" evidence=ISS] [GO:0006260 "DNA replication"
evidence=ISS] [GO:0006310 "DNA recombination" evidence=ISS]
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0004527
eggNOG:COG0419 KO:K03546 OMA:LVITHID RefSeq:YP_181293.1
ProteinModelPortal:Q3Z906 STRING:Q3Z906 GeneID:3230117
KEGG:det:DET0549 PATRIC:21608167 HOGENOM:HOG000275412
ProtClustDB:CLSK837411 BioCyc:DETH243164:GJNF-549-MONOMER
Uniprot:Q3Z906
Length = 859
Score = 125 (49.1 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 53/230 (23%), Positives = 108/230 (46%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYV 60
+++++GKY E+ K + ++ L+ L +++ +E E +R + + QYE +
Sbjct: 445 LKLVFGKYRTEQDAKEKQQSSLKLKLEQLRLDIQTLTAQIETET--KRLNQKRRQYEGQL 502
Query: 61 NMKNLGEHETKVQQME----QELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSK 116
++ G + K + +EL +++E S ++ L +EK+ +E N ++
Sbjct: 503 SVLEKGIADAKDAGTKAAKGRELISDIEKQLNQRSYAVSEQASLAVIEKEIQELNFDNAE 562
Query: 117 FRWS--VFSAKTRFE-----CDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERK 169
+ + + T FE D A+S L + K LA+L A + T L+E++
Sbjct: 563 YTQNQQTLAGLTHFEEQKRKLDDAQSRLPREKDSLEKTASALAELTA---RHNTKLSEQQ 619
Query: 170 TLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
TL EL +PA+E E+ + A L++ + L Q+ L+++ + E
Sbjct: 620 TLQRELA-ELPALEQELETAEAGYKSLSQTQDTLRQQLGSLSQKEEQLNE 668
Score = 48 (22.0 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 20/74 (27%), Positives = 33/74 (44%)
Query: 463 GRKATVSTDTSL---VKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKY--KK 517
G K+ T +L + L KE++L LE +L+ Q K + ++ G + KK
Sbjct: 641 GYKSLSQTQDTLRQQLGSLSQKEEQLNELEKKLKKQEQDKEQTAKEIYYFGKLARAFGKK 700
Query: 518 QEYDTCLIDVKSPK 531
T LI+ P+
Sbjct: 701 DGIQTMLIEDTLPE 714
>UNIPROTKB|Q9P1Z2 [details] [associations]
symbol:CALCOCO1 "Calcium-binding and coiled-coil
domain-containing protein 1" species:9606 "Homo sapiens"
[GO:0016055 "Wnt receptor signaling pathway" evidence=IEA]
[GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0003712 "transcription cofactor activity"
evidence=IDA] [GO:0003713 "transcription coactivator activity"
evidence=ISS;IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0030374 "ligand-dependent nuclear receptor transcription
coactivator activity" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0007165 "signal transduction"
evidence=ISS] [GO:0030518 "intracellular steroid hormone receptor
signaling pathway" evidence=ISS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0043231
"intracellular membrane-bounded organelle" evidence=IDA]
GO:GO:0005634 GO:GO:0005737 GO:GO:0045893 GO:GO:0016055
GO:GO:0043565 GO:GO:0045944 EMBL:CH471054 GO:GO:0006351
GO:GO:0003682 GO:GO:0044212 GO:GO:0000790 GO:GO:0030374 CTD:57658
eggNOG:NOG114876 HOVERGEN:HBG107573 OrthoDB:EOG4NZTTD
InterPro:IPR012852 Pfam:PF07888 EMBL:AY563137 EMBL:AB040969
EMBL:AL136895 EMBL:AY358397 EMBL:AK122773 EMBL:AK027881
EMBL:AF370415 EMBL:CR533567 EMBL:BC003177 EMBL:AY211909
IPI:IPI00011232 IPI:IPI00788619 IPI:IPI00794512 IPI:IPI00902761
RefSeq:NP_001137154.1 RefSeq:NP_065949.1 UniGene:Hs.156667
ProteinModelPortal:Q9P1Z2 DIP:DIP-47322N IntAct:Q9P1Z2
MINT:MINT-1399261 STRING:Q9P1Z2 DMDM:160017736 PaxDb:Q9P1Z2
PRIDE:Q9P1Z2 DNASU:57658 Ensembl:ENST00000262059
Ensembl:ENST00000430117 Ensembl:ENST00000548263
Ensembl:ENST00000550804 GeneID:57658 KEGG:hsa:57658 UCSC:uc001sef.3
UCSC:uc001seh.2 UCSC:uc009znd.3 GeneCards:GC12M054105
H-InvDB:HIX0129676 HGNC:HGNC:29306 HPA:HPA038313 HPA:HPA038314
neXtProt:NX_Q9P1Z2 PharmGKB:PA128394699 InParanoid:Q9P1Z2
OMA:YDMASGF PhylomeDB:Q9P1Z2 GenomeRNAi:57658 NextBio:64417
PMAP-CutDB:Q9P1Z2 ArrayExpress:Q9P1Z2 Bgee:Q9P1Z2
CleanEx:HS_CALCOCO1 Genevestigator:Q9P1Z2 GO:GO:0030518
Uniprot:Q9P1Z2
Length = 691
Score = 119 (46.9 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 52/239 (21%), Positives = 103/239 (43%)
Query: 13 TEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKV 72
TE +RVQ +E +AL ++ +E + R H EI + ER + + G+H ++
Sbjct: 175 TELRSRVQELE---RALATARQEHTELMEQYKGISRSHGEITE-ERDILSRQQGDHVARI 230
Query: 73 QQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDI 132
++E ++ E + E++ + +K + ++ + ++G ++ E +
Sbjct: 231 LELEDDIQTISEKVLTKEVELDRLRDTVKALTRE--QEKLLGQLKEVQADKEQSEAELQV 288
Query: 133 AKSE---LEIFLST-------QSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
A+ E L + L QS + ++L D A ++ +R E L ++
Sbjct: 289 AQQENHHLNLDLKEAKSWQEEQSAQAQRLKDKVAQMKDTLGQAQQRVAELEPLKEQLRGA 348
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSE-KRESMQTSRSNNRLIDFVMQLKSE 240
+ E+A S + A L EE L R ++E R ++ + N RL + + LK E
Sbjct: 349 Q-ELAASSQQKATLLGEE--LASAAAARDRTIAELHRSRLEVAEVNGRLAELGLHLKEE 404
Score = 52 (23.4 bits), Expect = 0.00022, Sum P(2) = 0.00022
Identities = 11/35 (31%), Positives = 23/35 (65%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQ 505
D+SLV+ L ++ L L + LR+L ++K +++ +
Sbjct: 459 DSSLVQ-LSESKRELTELRSALRVLQKEKEQLQEE 492
>TAIR|locus:2152985 [details] [associations]
symbol:CIP1 "COP1-interactive protein 1" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009507 "chloroplast" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005856
"cytoskeleton" evidence=IDA] [GO:0042306 "regulation of protein
import into nucleus" evidence=TAS] GO:GO:0005774 EMBL:CP002688
GO:GO:0009507 GO:GO:0005856 GO:GO:0042306 IPI:IPI00524345
RefSeq:NP_198994.2 UniGene:At.30208 PRIDE:F4JZY1
EnsemblPlants:AT5G41790.1 GeneID:834184 KEGG:ath:AT5G41790
OMA:KTHERES ArrayExpress:F4JZY1 Uniprot:F4JZY1
Length = 1586
Score = 118 (46.6 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 54/232 (23%), Positives = 116/232 (50%)
Query: 11 ERTEKLTRVQLVETDLKALEPE--LRKAVNFLE-LENCVQRKHNEIYQYERYVNMKNLGE 67
E +K+ Q+ E +K E +++ + E L+ K NE++ R ++ + E
Sbjct: 881 EEEKKILSQQISEMSIKIKRAESTIQELSSESERLKGSHAEKDNELFSL-RDIHETHQRE 939
Query: 68 HETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESN--VIGSKFRWSVFSA- 124
T+++ +E +L ++ + + ++ +++A+ E +T+ K E++ + ++ +A
Sbjct: 940 LSTQLRGLEAQLESSEHRVLELSESLKAAEEESRTMSTKISETSDELERTQIMVQELTAD 999
Query: 125 KTRFECDIAKSELEIFLSTQ--SK---ETKKL----ADLEANLEKVQTTLTERKTLCEEL 175
++ + +A+ E ++FL T+ SK + K+L A LE LE V+ + + +T
Sbjct: 1000 SSKLKEQLAEKESKLFLLTEKDSKSQVQIKELEATVATLELELESVRARIIDLETEIASK 1059
Query: 176 TTRVPAMESEIAESRARLADL--TREE--AKLLDQVEKLAREVSEKRESMQT 223
TT V +E++ E AR+++L T EE +L +KL + S++T
Sbjct: 1060 TTVVEQLEAQNREMVARISELEKTMEERGTELSALTQKLEDNDKQSSSSIET 1111
Score = 116 (45.9 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 49/219 (22%), Positives = 111/219 (50%)
Query: 10 EERTEKLTRVQLVETD-LKALEPELRKAVNFL-ELENCVQRKHNEIYQYERYVNMKNLGE 67
EE + L+ + L TD LK + ++++ V L E ++ + +K NE+ + V+ + +
Sbjct: 793 EEEKKSLSSMILEITDELKQAQSKVQELVTELAESKDTLTQKENELSSFVE-VHEAHKRD 851
Query: 68 HETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSV--FSAK 125
++V+++E + + E +K+ + S++ E K + ++ E ++ + ++ S++
Sbjct: 852 SSSQVKELEARVESAEEQVKELNQNLNSSEEEKKILSQQISEMSIKIKRAESTIQELSSE 911
Query: 126 T-RFECDIAKSELEIFL-----STQSKE-TKKLADLEANLEKVQ---TTLTERKTLCEE- 174
+ R + A+ + E+F T +E + +L LEA LE + L+E EE
Sbjct: 912 SERLKGSHAEKDNELFSLRDIHETHQRELSTQLRGLEAQLESSEHRVLELSESLKAAEEE 971
Query: 175 ---LTTRVPAMESEIAESRARLADLTREEAKLLDQV-EK 209
++T++ E+ ++ + +LT + +KL +Q+ EK
Sbjct: 972 SRTMSTKISETSDELERTQIMVQELTADSSKLKEQLAEK 1010
Score = 61 (26.5 bits), Expect = 0.00023, Sum P(2) = 0.00023
Identities = 16/51 (31%), Positives = 21/51 (41%)
Query: 471 DTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
D +E + L EL +S QK EVE Q+ C E K + D
Sbjct: 1102 DKQSSSSIETLTAEIDGLRAELDSMSVQKEEVEKQMVCKSEEASVKIKRLD 1152
Score = 59 (25.8 bits), Expect = 0.00037, Sum P(2) = 0.00037
Identities = 14/43 (32%), Positives = 28/43 (65%)
Query: 477 DLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
++E ++++++E +LR LS QK+ V Q+ T E ++K+E
Sbjct: 1385 EIETLMEKISNIEVKLR-LSNQKLRVTEQV-LTEKEEAFRKEE 1425
>UNIPROTKB|D4ADW5 [details] [associations]
symbol:Ktn1 "Protein Ktn1" species:10116 "Rattus
norvegicus" [GO:0007018 "microtubule-based movement" evidence=IEA]
[GO:0019894 "kinesin binding" evidence=IEA] InterPro:IPR024854
GO:GO:0007018 PANTHER:PTHR18864 GeneTree:ENSGT00530000063895
IPI:IPI00779196 Ensembl:ENSRNOT00000060727 ArrayExpress:D4ADW5
Uniprot:D4ADW5
Length = 1301
Score = 128 (50.1 bits), Expect = 0.00023, P = 0.00023
Identities = 81/393 (20%), Positives = 176/393 (44%)
Query: 10 EERTEKLTRVQLVETDLKALE-PELRKAVNFLELE-NCVQRKHNEIYQYERYVNMK--NL 65
+ER ++LT+ + E + ++ +++ + LE E N Q K + YQ + + MK +
Sbjct: 354 KERCKQLTQEMMTEKERSSVVMARMKERIGTLEKEHNIFQNKMHVSYQETQQMQMKFEQV 413
Query: 66 GEH-ETKVQQMEQELTANLESIKKCTDEMESAKS-ELKTVEKK-GKESNVIGSKFRWSVF 122
E E ++ ++QE +++ T+++ES +S EL + + G+ + + K
Sbjct: 414 REQMEAEIAHLKQENGILRDAVSNTTNQLESKQSAELNKLRQDCGRLVSELNEKTGKLQQ 473
Query: 123 SAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
+ + A ++L++ L Q E ++ ++++ + K +T E + ++L ++ A
Sbjct: 474 EGVQKKNAEQAAAQLKVQL--QEAE-RRWEEVQSYIRK-RTA--EHEAAQQDLQSKFVAK 527
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQ---LKS 239
E+E+ ++L D + +L ++ +L E +KR S + S ++ D + Q LK+
Sbjct: 528 ENEVQSLHSKLTDTLVSKQQLEQRLMQLM-ESEQKRASQEESMQI-QVQDILEQNEALKA 585
Query: 240 E-NRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQ---NVG 295
+ + ++ ++ L TE A E A K Q +V
Sbjct: 586 QIQQFHSQIAAQTSASVLAEELHKVIAEKDKQLKQ--TEDSLASEQDHLASKEQELKDVQ 643
Query: 296 RVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQ 355
VN + ++Q+ + ++ V ++ + V+D+KIRL RE VA + +
Sbjct: 644 NVNFLLKAEVQKLQALAKEQAAAAHEVEKMQKSVHVKDDKIRLLEEQLQRE--VASRVEE 701
Query: 356 AKRIGYSGGGYRMVT--LEGAIIE-PSETLVAQ 385
K + ++ L+ + E P++ +V Q
Sbjct: 702 LKILNDQNKALQLEVQKLQAVVSEQPNKDVVEQ 734
>UNIPROTKB|Q9Y2K3 [details] [associations]
symbol:MYH15 "Myosin-15" species:9606 "Homo sapiens"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0032982
"myosin filament" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00242 GO:GO:0005524
GO:GO:0030016 GO:GO:0003774 eggNOG:COG5022 GO:GO:0032982
HOVERGEN:HBG004704 KO:K10352 InterPro:IPR015650
PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959 EMBL:AB023217
EMBL:AC069499 IPI:IPI00180408 RefSeq:NP_055796.1 UniGene:Hs.731060
HSSP:P24733 ProteinModelPortal:Q9Y2K3 SMR:Q9Y2K3 STRING:Q9Y2K3
PhosphoSite:Q9Y2K3 DMDM:296439498 PaxDb:Q9Y2K3 PRIDE:Q9Y2K3
Ensembl:ENST00000273353 GeneID:22989 KEGG:hsa:22989 UCSC:uc003dxa.1
CTD:22989 GeneCards:GC03M108108 H-InvDB:HIX0119155
H-InvDB:HIX0200470 HGNC:HGNC:31073 HPA:HPA034871 MIM:609929
neXtProt:NX_Q9Y2K3 PharmGKB:PA134958635 InParanoid:Q9Y2K3
OMA:IIQYFAT OrthoDB:EOG42V8FB PhylomeDB:Q9Y2K3 GenomeRNAi:22989
NextBio:43835 Bgee:Q9Y2K3 CleanEx:HS_MYH15 Genevestigator:Q9Y2K3
Uniprot:Q9Y2K3
Length = 1946
Score = 111 (44.1 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 53/227 (23%), Positives = 108/227 (47%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLEL-ENCVQRKHNEIYQYERY 59
+E + K ++E+ +V+ + +++ L ++ K ++ + Q+ ++++ E
Sbjct: 969 LETMLVKSEKEKRTTEHKVKNLTEEVEFLNEDISKLNRAAKVVQEAHQQTLDDLHMEEE- 1027
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
+ +L + K++Q EL LE +K E +L+ K +ES
Sbjct: 1028 -KLSSLSKANLKLEQQVDELEGALEQERKARMNCERELHKLEGNLKLNRESME------- 1079
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKK--LADLEANLEKVQTTLTERKTLCE-ELT 176
++ S++ ++ K ELE+ E +K +A L+ ++++QT + + K E E T
Sbjct: 1080 NLESSQRHLAEELRKKELELSQMNSKVENEKGLVAQLQKTVKELQTQIKDLKEKLEAERT 1139
Query: 177 TRVPAMESEIAESRARLADLTREEAKLLDQV--EKLAR-EVSEKRES 220
TR ME E A+ LADL L++V LA+ E+++K+E+
Sbjct: 1140 TRAK-MERERADLTQDLADLNER----LEEVGGSSLAQLEITKKQET 1181
Score = 107 (42.7 bits), Expect = 0.00063, Sum P(2) = 0.00063
Identities = 70/328 (21%), Positives = 133/328 (40%)
Query: 13 TEKLTRVQLVETDLKALEPELRKAVNFLE----LENCVQRKHNEIYQYERYVNMKNLGEH 68
TE L E + E R+ N E L N V+ + + E+ K + E
Sbjct: 1491 TELLKLKNTYEESIVGQETLRRENKNLQEEISNLTNQVREGTKNLTEMEKV--KKLIEEE 1548
Query: 69 ETKVQ----QMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFS 123
+T+VQ + E L N I E+ AK+EL + + +K +E K + ++ S
Sbjct: 1549 KTEVQVTLEETEGALERNESKILHFQLELLEAKAELERKLSEKDEEIENFRRKQQCTIDS 1608
Query: 124 AKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAME 183
++ + + AKS +E+ + K + L ++E L ++E +L ++ ++
Sbjct: 1609 LQSSLDSE-AKSRIEV-TRLKKKMEEDLNEMELQLSCANRQVSEATKSLGQLQIQIKDLQ 1666
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
++ +S +DL +E+ + ++ L + E S+Q R + L++ R+
Sbjct: 1667 MQLDDSTQLNSDL-KEQVAVAERRNSLLQSELEDLRSLQEQTERGRRLSEEELLEATERI 1725
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGE-AVIAAVKRQNVGRVNVIPL 302
+ +K + V+ +V E A E A AA++ N+ L
Sbjct: 1726 NLFYTQNTSLLSQKKKLEADVARMQKEAEEVVQECQNAEEKAKKAAIEAANLSE----EL 1781
Query: 303 DKMQQYHSQCYDKYRTPENVPRLIDLIQ 330
K Q + RT EN+ + I +Q
Sbjct: 1782 KKKQDTIAHLE---RTRENMEQTITDLQ 1806
Score = 70 (29.7 bits), Expect = 0.00024, Sum P(2) = 0.00024
Identities = 32/126 (25%), Positives = 59/126 (46%)
Query: 410 IEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVS 469
+E + T + + L +A+++ G ++ LE + E G + G G +
Sbjct: 1798 MEQTITDLQKRLAEAEQMALMGSRKQIQKLESRVRELEGELEGEIRRSAEAQRGARRLER 1857
Query: 470 TDTSLVKDLEVKEKRLASLETELRILS------QQKMEV-ETQLNCTGNELKYKKQEYDT 522
L E +K L+ ++T++ L +Q++EV ETQ N + KYKKQ+++
Sbjct: 1858 CIKELTYQAEEDKKNLSRMQTQMDKLQLKVQNYKQQVEVAETQANQYLS--KYKKQQHE- 1914
Query: 523 CLIDVK 528
L +VK
Sbjct: 1915 -LNEVK 1919
>WB|WBGene00004873 [details] [associations]
symbol:smc-3 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0051276 "chromosome organization" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040002 "collagen and cuticulin-based cuticle
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0030261 "chromosome condensation"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IMP]
[GO:0007109 "cytokinesis, completion of separation" evidence=IMP]
[GO:0000793 "condensed chromosome" evidence=IDA] [GO:0000794
"condensed nuclear chromosome" evidence=IDA] [GO:0005819 "spindle"
evidence=IDA] [GO:0008278 "cohesin complex" evidence=IDA;IPI]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0004674 "protein
serine/threonine kinase activity" evidence=NAS] InterPro:IPR010935
Pfam:PF06470 SMART:SM00968 InterPro:IPR003395 Pfam:PF02463
GO:GO:0005524 GO:GO:0008340 GO:GO:0009792 GO:GO:0002009
GO:GO:0006898 GO:GO:0040010 GO:GO:0007059 GO:GO:0005819
GO:GO:0004674 GO:GO:0040011 GO:GO:0000790 GO:GO:0040035
GO:GO:0000794 GO:GO:0030261 GO:GO:0007109 GO:GO:0040002
GO:GO:0008278 EMBL:AL117202 eggNOG:COG1196 SUPFAM:SSF75553
HOGENOM:HOG000166512 KO:K06669 OMA:NKVLEHF
GeneTree:ENSGT00580000081628 RefSeq:NP_001129842.1
ProteinModelPortal:B2FDA8 SMR:B2FDA8 STRING:B2FDA8 PaxDb:B2FDA8
EnsemblMetazoa:Y47D3A.26b.1 EnsemblMetazoa:Y47D3A.26b.2
GeneID:176559 KEGG:cel:CELE_Y47D3A.26 CTD:176559
WormBase:Y47D3A.26b InParanoid:B2FDA8 NextBio:893080
ArrayExpress:B2FDA8 Uniprot:B2FDA8
Length = 1261
Score = 109 (43.4 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 74/388 (19%), Positives = 163/388 (42%)
Query: 12 RTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETK 71
R +K T +Q ET + + L+ ++ L EN +R+ + ++ +++ +G+ +
Sbjct: 286 REDKET-LQAEETKMVEEKMTLKLEIDSLNEENTRERQGRQNAEH----SLQGVGD---E 337
Query: 72 VQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVI-GSKFRWSVFSAKTRF-E 129
+ + E+EL K +E K++++ E + KE G + ++S + +F
Sbjct: 338 IFKNEEELDTIKPEYAKLLEEESRLKTDIRIDESRAKEILAKQGQRSQFSSVDDRDKFLR 397
Query: 130 CDIAKSELEIFLSTQSKET--KKLADLEANLEK----VQT---TLTERKTLCEELTTRVP 180
+I + I + + +ET K+LAD+E EK +Q+ T+ E + + +
Sbjct: 398 NEIRRISGLIADNKEREETIQKELADVEREDEKLNNEIQSISRTIDENRYEMDTFAAKST 457
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ--TSRS-NNRLIDF---V 234
+++ E + REE + D++ +++S + ++ +R N + +
Sbjct: 458 SLKQEYDAAYVAQQTAAREEKAIRDKIGNTEQDISAANDQLRRIVARPVYNGITGVRKVI 517
Query: 235 MQLKSENR-------VSXXXXXXXXXXXXXQKYDIAVST-ACGALNYIVTETVEAGEAVI 286
+ K +NR ++ + AV A L Y V ET ++
Sbjct: 518 EEFKHDNRNGQHDDVINGYYGTVIELAEVPDMFRTAVEVIAQNRLFYHVVETDRIATKIL 577
Query: 287 AAVKRQNV-GRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATR 345
+ G +N P++++ + + +ID +VQ +K+ F T
Sbjct: 578 RKFNEMQLPGEINFFPMNRVSAPRQRDLSNNSNARPMSDVIDY-EVQYDKV---FKSITA 633
Query: 346 ETLVAQDLNQAKRIGYSGGGYRMVTLEG 373
++ + L+QA R G+ +V+++G
Sbjct: 634 NVIIVRTLDQAAR-DLRNEGFDVVSVDG 660
Score = 68 (29.0 bits), Expect = 0.00025, Sum P(2) = 0.00025
Identities = 23/102 (22%), Positives = 48/102 (47%)
Query: 413 SETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+ ++ + L+QA R G+ +V+++G + G M+GG + R K + T
Sbjct: 633 ANVIIVRTLDQAAR-DLRNEGFDVVSVDGDQMSKKGVMTGGFIDKKRS----KLELHTQK 687
Query: 473 S-LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
K+L +K LA E +R +Q+ ++ ++ N++
Sbjct: 688 DRFTKELAELQKSLAEAEKMVRERTQEAEKIRNRMQQHENQI 729
>UNIPROTKB|Q9PTD7 [details] [associations]
symbol:cgn "Cingulin" species:8355 "Xenopus laevis"
[GO:0003779 "actin binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005923 "tight junction" evidence=NAS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR002928
Pfam:PF01576 GO:GO:0003779 GO:GO:0005923 GO:GO:0003774
GO:GO:0016459 CTD:57530 KO:K06102 HOVERGEN:HBG031389 EMBL:AF207901
EMBL:BC091650 RefSeq:NP_001081970.1 UniGene:Xl.3379
ProteinModelPortal:Q9PTD7 IntAct:Q9PTD7 MINT:MINT-220301
GeneID:398149 KEGG:xla:398149 Xenbase:XB-GENE-1009260
Uniprot:Q9PTD7
Length = 1360
Score = 123 (48.4 bits), Expect = 0.00026, Sum P(2) = 0.00025
Identities = 51/240 (21%), Positives = 113/240 (47%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKN--LG 66
D+++ E+ +Q E ++ AL+ L++ V+ + E R ++ +V +N L
Sbjct: 737 DKQKVEE--NLQQREREMSALKGTLKEEVSGRDRETV--RLREQLQSEVMHVKKENEGLA 792
Query: 67 EHETKVQ-QMEQ---ELTANLESIKKCTDEMESAKSELKT-VEKKGKESNVIGSKFRWSV 121
+ ++Q Q++Q E + E++ + E+ K LK V + +E+ + +
Sbjct: 793 KESRRIQDQLKQVLLEKQRHEETVHQRERELSVLKGALKDEVSGRDRETEKLRERLEQDA 852
Query: 122 FSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
K +E ++ K + +S++T DLE + ++ L E + ++L ++
Sbjct: 853 LMTKRSYE-ELVKINKRL----ESEKT----DLERVRQVIENNLQESREENDDLRRKILG 903
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQ-LKSE 240
+E+++ E+ DL R E++L D++ KL E +S+ + + FV + L+S+
Sbjct: 904 LEAQLKETNTFCDDLQRAESRLKDKINKLEAERKRMEDSLGEVADQEQELAFVKRDLESK 963
Score = 123 (48.4 bits), Expect = 0.00086, P = 0.00086
Identities = 70/375 (18%), Positives = 161/375 (42%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRK-AVNFLELENCVQRK-----H---- 50
ME G+ ++ E + +E+ L + L++ ++ + EL+ C Q + H
Sbjct: 939 MEDSLGEVADQEQELAFVKRDLESKLDEAQRSLKRLSLEYEELQECYQEEMKQKDHLKKT 998
Query: 51 -NEIYQYERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEM-ESAKSELKTVEKKGK 108
NE+ + +R ++ K++ + ++ M E +L+ ++ +E E ++ E+ +K+ K
Sbjct: 999 KNELEEQKRLLD-KSMDKLTRELDNMSNESRGSLQLLQTQLEEYREKSRKEIGEAQKQAK 1057
Query: 109 ESNVIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLAD--LEANLEKVQTTLT 166
E + +++ +R + ++ K +L + KET +L + L+ ++ +
Sbjct: 1058 EKTAEAERHQFN----SSRMQEEVQKLKLALQELQVEKETVELDKQMISQRLQSLEQDIE 1113
Query: 167 ERKTLCEELTTRVPAMESEIAESRARLADLTREEAKLL-DQVEKLAREVSEKRESMQTSR 225
+K + ++ + +V +E ++ A L D + +LL D+V + ++ ++R + R
Sbjct: 1114 SKKRVQDDRSRQVKVLEDKLKRMEAEL-DEEKNTVELLTDRVNRSRDQMEQQRAELNQER 1172
Query: 226 SNNRLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVT--ETVEAGE 283
S + D S R + QK + VS L I + E +
Sbjct: 1173 SRGQ--DLECDKISLERQNKELKNRLASMEGQQKPSVNVSHLEAKLQEIQERLQLEEREK 1230
Query: 284 AVIAAVKRQ---NVGRVNVIPLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAF 340
A + + R+ + +N+ D+ Q + Q + + R +D + + E++
Sbjct: 1231 ATLLSTNRKLERKLKELNIQLEDERLQVNDQKDQLNLRVKALKRQVDEAEEEIERLEGLR 1290
Query: 341 YFATRETLVAQDLNQ 355
A RE Q++N+
Sbjct: 1291 KKAVREMEEQQEINE 1305
Score = 54 (24.1 bits), Expect = 0.00026, Sum P(2) = 0.00025
Identities = 26/69 (37%), Positives = 37/69 (53%)
Query: 462 MGRKATVSTDTSLVK-DLEVK--E-----KRLASLE-TELRILSQQKMEVETQLNCTGNE 512
+G A + + VK DLE K E KRL SLE EL+ Q++M+ + L T NE
Sbjct: 943 LGEVADQEQELAFVKRDLESKLDEAQRSLKRL-SLEYEELQECYQEEMKQKDHLKKTKNE 1001
Query: 513 LKYKKQEYD 521
L+ +K+ D
Sbjct: 1002 LEEQKRLLD 1010
>RGD|3140 [details] [associations]
symbol:Myh9 "myosin, heavy chain 9, non-muscle" species:10116
"Rattus norvegicus" [GO:0000146 "microfilament motor activity"
evidence=ISO;ISS] [GO:0000212 "meiotic spindle organization"
evidence=ISO] [GO:0000904 "cell morphogenesis involved in
differentiation" evidence=ISO] [GO:0000910 "cytokinesis"
evidence=ISO;ISS] [GO:0001525 "angiogenesis" evidence=ISO;ISS]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001725 "stress fiber" evidence=ISO;ISS] [GO:0001726 "ruffle"
evidence=ISO;ISS] [GO:0001768 "establishment of T cell polarity"
evidence=ISO] [GO:0001931 "uropod" evidence=ISO] [GO:0003779 "actin
binding" evidence=ISO] [GO:0005391 "sodium:potassium-exchanging
ATPase activity" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005516 "calmodulin binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0005737 "cytoplasm" evidence=ISO;ISS;IDA]
[GO:0005826 "actomyosin contractile ring" evidence=ISO;ISS]
[GO:0005829 "cytosol" evidence=ISO;ISS] [GO:0005886 "plasma membrane"
evidence=ISO;ISS] [GO:0005913 "cell-cell adherens junction"
evidence=ISO] [GO:0005938 "cell cortex" evidence=ISO] [GO:0006200
"ATP catabolic process" evidence=ISO;ISS] [GO:0006509 "membrane
protein ectodomain proteolysis" evidence=ISO;ISS] [GO:0006928
"cellular component movement" evidence=ISO] [GO:0007132 "meiotic
metaphase I" evidence=ISO] [GO:0007155 "cell adhesion" evidence=ISO]
[GO:0007520 "myoblast fusion" evidence=ISO] [GO:0008305 "integrin
complex" evidence=ISO;ISS] [GO:0008360 "regulation of cell shape"
evidence=ISO;ISS] [GO:0010524 "positive regulation of calcium ion
transport into cytosol" evidence=IMP] [GO:0015031 "protein transport"
evidence=ISO;ISS] [GO:0015629 "actin cytoskeleton" evidence=ISO;ISS]
[GO:0016328 "lateral plasma membrane" evidence=IDA] [GO:0016337
"cell-cell adhesion" evidence=ISO] [GO:0016459 "myosin complex"
evidence=IEA;ISO] [GO:0016460 "myosin II complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO;ISS] [GO:0019901 "protein
kinase binding" evidence=IPI] [GO:0030048 "actin filament-based
movement" evidence=ISO;ISS] [GO:0030220 "platelet formation"
evidence=ISO;ISS] [GO:0030224 "monocyte differentiation"
evidence=ISO;ISS] [GO:0030863 "cortical cytoskeleton" evidence=ISO]
[GO:0030898 "actin-dependent ATPase activity" evidence=ISO]
[GO:0031252 "cell leading edge" evidence=ISO;ISS] [GO:0031532 "actin
cytoskeleton reorganization" evidence=ISO;ISS] [GO:0031762
"follicle-stimulating hormone receptor binding" evidence=IDA]
[GO:0032154 "cleavage furrow" evidence=ISO;ISS] [GO:0032796 "uropod
organization" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO;ISS] [GO:0043234 "protein complex"
evidence=ISO;ISS;IDA] [GO:0043495 "protein anchor" evidence=ISO;ISS]
[GO:0043531 "ADP binding" evidence=ISO] [GO:0043534 "blood vessel
endothelial cell migration" evidence=ISO;ISS] [GO:0045807 "positive
regulation of endocytosis" evidence=IMP] [GO:0050766 "positive
regulation of phagocytosis" evidence=IMP] [GO:0051015 "actin filament
binding" evidence=ISO;ISS] [GO:0051295 "establishment of meiotic
spindle localization" evidence=ISO] [GO:0070062 "extracellular
vesicular exosome" evidence=ISO] [GO:0005768 "endosome" evidence=IDA]
[GO:0045335 "phagocytic vesicle" evidence=IDA] [GO:0001772
"immunological synapse" evidence=ISO] [GO:0005819 "spindle"
evidence=ISO] [GO:0008180 "signalosome" evidence=ISO] [GO:0031594
"neuromuscular junction" evidence=ISO] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063
Pfam:PF00612 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 RGD:3140 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0043234 GO:GO:0042803 GO:GO:0005819 GO:GO:0008360
GO:GO:0030863 GO:GO:0015031 GO:GO:0001701 GO:GO:0031594 GO:GO:0051015
GO:GO:0043531 GO:GO:0001525 GO:GO:0005913 GO:GO:0000910 GO:GO:0031532
GO:GO:0050766 GO:GO:0000146 GO:GO:0001725 GO:GO:0001726 GO:GO:0043495
GO:GO:0016337 GO:GO:0005826 GO:GO:0006509 GO:GO:0007520 GO:GO:0043534
GO:GO:0016328 GO:GO:0010524 GO:GO:0008180 GO:GO:0032154 GO:GO:0030048
eggNOG:COG5022 GO:GO:0051295 GO:GO:0005391 GO:GO:0001772
GO:GO:0030224 GO:GO:0001768 GO:GO:0007132 GO:GO:0032796 GO:GO:0001931
GO:GO:0000212 GO:GO:0030220 GO:GO:0008305 GO:GO:0016460 GO:GO:0030898
HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1
CTD:4627 EMBL:U31463 IPI:IPI00209113 RefSeq:NP_037326.1
UniGene:Rn.11385 ProteinModelPortal:Q62812 SMR:Q62812 IntAct:Q62812
MINT:MINT-2778870 STRING:Q62812 PhosphoSite:Q62812 PRIDE:Q62812
GeneID:25745 KEGG:rno:25745 UCSC:RGD:3140 InParanoid:Q62812
NextBio:607917 ArrayExpress:Q62812 Genevestigator:Q62812
GermOnline:ENSRNOG00000004860 GO:GO:0031762 Uniprot:Q62812
Length = 1961
Score = 132 (51.5 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 50/222 (22%), Positives = 102/222 (45%)
Query: 12 RTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETK 71
+ EK R L E +L+AL+ EL ++ + ++ K + + HE +
Sbjct: 1129 KAEKQKR-DLGE-ELEALKTELEDTLDSTAAQQELRSKREQEVSILKKTLEDEAKTHEAQ 1186
Query: 72 VQQMEQ-------ELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
+Q+M Q EL LE K+ +E AK L+ ++G+ +N + + + S
Sbjct: 1187 IQEMRQKHSQAVEELAEQLEQTKRVKATLEKAKQTLEN--ERGELANEVKALLQGKGDSE 1244
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLAD----LEANLEKVQTTLTERKTLCEELTTRVP 180
R + + EL++ S + +LAD L+ L+ V L + + +LT
Sbjct: 1245 HKRKKVEAQLQELQVKFSEGERVRTELADKVSKLQVELDSVTGLLNQSDSKSSKLTKDFS 1304
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ 222
A+ES++ +++ L + R++ L +++++ E + RE ++
Sbjct: 1305 ALESQLQDTQELLQEENRQKLSLSTKLKQMEDEKNSFREQLE 1346
Score = 48 (22.0 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 471 DTSLVKD-LEVKEKRLASLETEL---RILSQQKMEVETQLNCTGNELKYKKQEYDTCL 524
+T L+ D L+ ++ + T+L R +Q+ QL ELK K QE ++ +
Sbjct: 1745 NTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKAKLQEMESAV 1802
Score = 47 (21.6 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 483 KRLASLETELRILSQQKMEVETQLNCTGNELK 514
K + LE R L QQ E++TQL +EL+
Sbjct: 1519 KSVHELEKSNRALEQQVEEMKTQLEELEDELQ 1550
Score = 44 (20.5 bits), Expect = 0.00065, Sum P(2) = 0.00065
Identities = 17/53 (32%), Positives = 26/53 (49%)
Query: 478 LEVKEKRLASLETELRILSQ---QKMEVETQLNCTGNELKYKKQEYDTCLIDV 527
LE E+ L+ +L LSQ +K+ +L T L+ QE D L+D+
Sbjct: 1381 LETAEEAKRRLQKDLEGLSQRLEEKVAAYDKLEKTKTRLQ---QELDDLLVDL 1430
>UNIPROTKB|I3LIQ9 [details] [associations]
symbol:I3LIQ9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016459 "myosin complex" evidence=IEA] [GO:0003774
"motor activity" evidence=IEA] InterPro:IPR002928 Pfam:PF01576
GO:GO:0003774 GO:GO:0016459 GeneTree:ENSGT00630000089684
Ensembl:ENSSSCT00000025832 OMA:IDHALEH Uniprot:I3LIQ9
Length = 240
Score = 117 (46.2 bits), Expect = 0.00026, P = 0.00026
Identities = 56/235 (23%), Positives = 102/235 (43%)
Query: 68 HETKVQQMEQELTANLESIKKCTDEMESAKSEL-KTVEKKGKESNVIGSKFRWSVFSAKT 126
HE +VQ+M Q+ T +E + + ++ + AK+ L K + KE+ +G + R V S +
Sbjct: 13 HEAQVQEMRQKHTQAVEELTEQLEQFKRAKANLDKNKQTLEKENADLGGELR--VLS-QA 69
Query: 127 RFECDIAKSELEIFLST-QSKET---KKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
+ E + K +LE+ L QSK + + A+L + K+Q + + E + +
Sbjct: 70 KQEVEHKKKKLEVQLQELQSKCSDGERARAELNDKVHKLQNEVESVTGMLNEAEGKAIKL 129
Query: 183 ESEIAESRARLAD---LTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKS 239
++A ++L D L +EE + V R++ ++R S+Q +D M+ K
Sbjct: 130 AKDVASLGSQLQDTQELLQEETRQKLNVSTKLRQLEDERNSLQDQ------LDEEMEAKQ 183
Query: 240 --ENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQ 292
E +S Q D + CG E E + AV+R+
Sbjct: 184 NLERHISTLNIQLSDSKKKLQ--DXGLCQHCGIPGGGQEEVPEGDRSPHPAVRRE 236
>ZFIN|ZDB-GENE-070705-73 [details] [associations]
symbol:myhz1.2 "myosin, heavy polypeptide 1.2,
skeletal muscle" species:7955 "Danio rerio" [GO:0016459 "myosin
complex" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-070705-73 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
HOVERGEN:HBG004704 InterPro:IPR015650 PANTHER:PTHR13140:SF22
HOGENOM:HOG000173959 OrthoDB:EOG43N7BR GeneTree:ENSGT00680000099788
EMBL:BX510649 IPI:IPI00773363 UniGene:Dr.104477 UniGene:Dr.121240
Ensembl:ENSDART00000098067 Ensembl:ENSDART00000131983 OMA:VTRINEM
Uniprot:B8A561
Length = 1937
Score = 127 (49.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 50/247 (20%), Positives = 112/247 (45%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ A + + K + L+ Q+ +++ E
Sbjct: 959 LELTLAKVEKEKHATENKVKNLTEEMAAQDESIGKLTKEKKALQEAHQQTLDDLQAEEDK 1018
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1019 VN--TLTKSKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLENDKQ 1076
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE S++E S ++ KK+ +L+A +E+++ + + ++
Sbjct: 1077 QSEEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEK 1136
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ + E+ E RL + A ++ +K E + R ++ S + ++
Sbjct: 1137 QRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRK 1196
Query: 238 KSENRVS 244
K + V+
Sbjct: 1197 KQADSVA 1203
Score = 53 (23.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 22/108 (20%), Positives = 48/108 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGG---GSNPIRGLMGRKATVSTDTSLVKD 477
L++A+ + GG ++ LE + E + G++ ++G+ + V T ++
Sbjct: 1799 LDEAENLAMKGGKKQLQKLESRVRELESEVEAEQRRGADAVKGVRKYERRVKELTYQTEE 1858
Query: 478 LEVKEKRLASLETELRI----LSQQKMEVETQLNCTGNELKYKKQEYD 521
+ RL L +L++ +Q E E Q N ++L+ + E +
Sbjct: 1859 DKKNVNRLQDLVDKLQLKVKAYKRQSEEAEEQANSHLSKLRKVQHELE 1906
Score = 48 (22.0 bits), Expect = 0.00083, Sum P(2) = 0.00083
Identities = 18/73 (24%), Positives = 36/73 (49%)
Query: 454 GSNPIRGLMGRKATVSTDTSLVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTG-- 510
G + G ++ST+ +K+ E +L +L+ E + L Q+ ++ Q+ TG
Sbjct: 1465 GQAELEGAQKEARSLSTELFKMKNSYEETLDQLETLKRENKNLQQEISDLTEQIGETGKS 1524
Query: 511 -NELKYKKQEYDT 522
+EL+ K+ +T
Sbjct: 1525 IHELEKSKKAVET 1537
>ZFIN|ZDB-GENE-000322-5 [details] [associations]
symbol:myhz1.1 "myosin, heavy polypeptide 1.1,
skeletal muscle" species:7955 "Danio rerio" [GO:0016459 "myosin
complex" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0001757 "somite
specification" evidence=IEP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-000322-5 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GO:GO:0001757 InterPro:IPR015650 PANTHER:PTHR13140:SF22
GeneTree:ENSGT00680000099788 EMBL:BX510649 IPI:IPI00932699
Ensembl:ENSDART00000109263 Uniprot:F1Q4R7
Length = 1938
Score = 127 (49.8 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 50/247 (20%), Positives = 112/247 (45%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ A + + K + L+ Q+ +++ E
Sbjct: 960 LELTLAKVEKEKHATENKVKNLTEEMAAQDESIGKLTKEKKALQEAHQQTLDDLQAEEDK 1019
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1020 VN--TLTKSKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLENDKQ 1077
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE S++E S ++ KK+ +L+A +E+++ + + ++
Sbjct: 1078 QSEEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEK 1137
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ + E+ E RL + A ++ +K E + R ++ S + ++
Sbjct: 1138 QRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRK 1197
Query: 238 KSENRVS 244
K + V+
Sbjct: 1198 KQADSVA 1204
Score = 53 (23.7 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 22/108 (20%), Positives = 48/108 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGG---GSNPIRGLMGRKATVSTDTSLVKD 477
L++A+ + GG ++ LE + E + G++ ++G+ + V T ++
Sbjct: 1800 LDEAENLAMKGGKKQLQKLESRVRELESEVEAEQRRGADAVKGVRKYERRVKELTYQTEE 1859
Query: 478 LEVKEKRLASLETELRI----LSQQKMEVETQLNCTGNELKYKKQEYD 521
+ RL L +L++ +Q E E Q N ++L+ + E +
Sbjct: 1860 DKKNVNRLQDLVDKLQLKVKAYKRQSEEAEEQANSHLSKLRKVQHELE 1907
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 454 GSNPIRGLMGRKATVSTDTSLVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTG-- 510
G + G ++ST+ +K+ E +L +L+ E + L Q+ ++ QL TG
Sbjct: 1466 GQAELEGAQKEARSLSTELFKMKNSYEETLDQLETLKRENKNLQQEISDLTEQLGETGKS 1525
Query: 511 -NELKYKKQEYDT 522
+EL+ K+ +T
Sbjct: 1526 IHELEKSKKAVET 1538
>RGD|3139 [details] [associations]
symbol:Myh4 "myosin, heavy chain 4, skeletal muscle" species:10116
"Rattus norvegicus" [GO:0003774 "motor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005925 "focal adhesion" evidence=ISO] [GO:0006936
"muscle contraction" evidence=ISO] [GO:0014823 "response to activity"
evidence=ISO] [GO:0030016 "myofibril" evidence=IEA;ISO] [GO:0032982
"myosin filament" evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 RGD:3139 GO:GO:0005524 GO:GO:0030016 GO:GO:0003774
eggNOG:COG5022 GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352
InterPro:IPR015650 PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959
CTD:4622 EMBL:BC113948 IPI:IPI00948572 RefSeq:NP_062198.1
UniGene:Rn.224464 ProteinModelPortal:Q29RW1 SMR:Q29RW1 IntAct:Q29RW1
STRING:Q29RW1 PRIDE:Q29RW1 GeneID:360543 KEGG:rno:360543
UCSC:RGD:3139 InParanoid:Q29RW1 NextBio:673147 ArrayExpress:Q29RW1
Genevestigator:Q29RW1 Uniprot:Q29RW1
Length = 1939
Score = 125 (49.1 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 50/220 (22%), Positives = 107/220 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 961 LELTLAKVEKEKHATENKVKNLTEEMAGLDENIVKLTKEKKALQEAHQQTLDDLQAEEDK 1020
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1021 VN--TLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTM------- 1071
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + + + K E E+ + QSK + D +A ++Q + E + EEL +
Sbjct: 1072 DIENDKQQLDEKLKKKEFEMS-NLQSK----IEDEQALGMQLQKKIKELQARIEELEEEI 1126
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
A + A++ + +DL+RE ++ +++E+ S + E
Sbjct: 1127 EAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE 1166
Score = 55 (24.4 bits), Expect = 0.00026, Sum P(2) = 0.00026
Identities = 24/109 (22%), Positives = 49/109 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMG-RK-------ATVSTDT 472
L++A+++ GG ++ LE + E + I + G RK T T+
Sbjct: 1801 LDEAEQLALKGGKKQIQKLEARVRELENEVENEQKRNIEAVKGLRKHERRVKELTYQTEE 1860
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
L +++ + L+T+++ +Q E E Q N N K++K +++
Sbjct: 1861 DRKNVLRLQDL-VDKLQTKVKAYKRQAEEAEEQSNV--NLAKFRKIQHE 1906
Score = 50 (22.7 bits), Expect = 0.00085, Sum P(2) = 0.00085
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K ++ E R+ LE E+ ++QK +E +E + K+ Y T
Sbjct: 1814 KQIQKLEARVRELENEVE--NEQKRNIEAVKGLRKHERRVKELTYQT 1858
>DICTYBASE|DDB_G0274893 [details] [associations]
symbol:DDB_G0274893 "unknown" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] [GO:0044351
"macropinocytosis" evidence=RCA] dictyBase:DDB_G0274893
GO:GO:0045335 EMBL:AAFI02000012 eggNOG:NOG12793 RefSeq:XP_644107.1
ProteinModelPortal:Q555G2 EnsemblProtists:DDB0238208 GeneID:8619537
KEGG:ddi:DDB_G0274893 OMA:HIADGAN Uniprot:Q555G2
Length = 915
Score = 123 (48.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 55/233 (23%), Positives = 113/233 (48%)
Query: 14 EKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIY--QYERYVNMKNLGEHETK 71
EK RV+ TDLK +L K + +N + + + +Y Q E ++ K + +
Sbjct: 36 EKSKRVKAQITDLKDENSKLLKETK--KFQNRLIEESSLLYFLQKEAHLLKKIVNNKNPE 93
Query: 72 VQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES-NVIGSKFRWSVFSAKTRFEC 130
++ + Q + ESIKK +E+E ++ + T++ + KE +K + S K
Sbjct: 94 IKTLNQTIYDQHESIKKLKEEVEKEQNNV-TMQIELKELLKQSENKLLLELTSVKDTLLI 152
Query: 131 DIAKSELE---IFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIA 187
+ ++S L+ I T+ K +++ + LEK+ + E K +L R+ + + +++
Sbjct: 153 E-SQSHLQVKGILKETEDKLEQEIKINKEKLEKLDKEINEHKDSINQLQERLESTQDQLS 211
Query: 188 ESRARLADLTR--EEAKL-----LDQVEKLAREV-SEKRESMQTSRSNNRLID 232
+S+ + ++ EE K L ++E+L E+ SEK++ + N+LI+
Sbjct: 212 KSQQENQEKSKDIEELKSQLELNLQEIERLKIEINSEKQKFENLQDTYNQLIE 264
Score = 50 (22.7 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 12/55 (21%), Positives = 29/55 (52%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
K ++++ ++L+ +L E+ +++++++ +L NELK K QE
Sbjct: 242 KIEINSEKQKFENLQDTYNQLIEKNKEIIKSLEEEVKIKDELQIALNELKEKNQE 296
>UNIPROTKB|Q076A4 [details] [associations]
symbol:MYH8 "Myosin-8" species:9615 "Canis lupus
familiaris" [GO:0030016 "myofibril" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0032982 "myosin filament" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
[GO:0003774 "motor activity" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 GO:GO:0005524
GO:GO:0030016 GO:GO:0003774 GO:GO:0032982 HOVERGEN:HBG004704
KO:K10352 InterPro:IPR015650 PANTHER:PTHR13140:SF22
HOGENOM:HOG000173959 GeneTree:ENSGT00680000099790 OrthoDB:EOG43N7BR
EMBL:DQ227283 RefSeq:NP_001070703.1 UniGene:Cfa.47291
ProteinModelPortal:Q076A4 SMR:Q076A4 STRING:Q076A4 PRIDE:Q076A4
Ensembl:ENSCAFT00000027778 GeneID:403808 KEGG:cfa:403808 CTD:4626
InParanoid:Q076A4 OMA:QLKRNHT NextBio:20817304 Uniprot:Q076A4
Length = 1939
Score = 123 (48.4 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 49/220 (22%), Positives = 104/220 (47%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 962 LELTLAKVEKEKHATENKVKNLTEEMAGLDETIAKLTKEKKALQEAHQQTLDDLQAEEDK 1021
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + +TK++Q +L +LE +K ++E AK +L+ K +ES +
Sbjct: 1022 VN--TLTKAKTKLEQQVDDLEGSLEQERKLRMDLERAKRKLEGDLKLAQESTMDAE---- 1075
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ K + + + K E EI S K+ D +A ++Q + E + EEL +
Sbjct: 1076 ---NDKQQLDEKLKKKEFEI-----SNLLSKIEDEQAIEIQLQKKIKELQARIEELEEEI 1127
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
A + A++ + +DL+RE ++ +++E+ S + E
Sbjct: 1128 EAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE 1167
Score = 119 (46.9 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 49/230 (21%), Positives = 102/230 (44%)
Query: 15 KLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQ 74
K+ Q +E L+ EL+ + LE E +R + +R + L E ++++
Sbjct: 1098 KIEDEQAIEIQLQKKIKELQARIEELEEEIEAERASRAKAEKQRSDLSRELEEISERLEE 1157
Query: 75 MEQELTANLESIKKCTDEMESAKSELK--TVEKKGKESNVIGSKFRWSVFSAKTRFE-CD 131
+A +E KK E + + +L+ T++ + + + K SV + +
Sbjct: 1158 AGGATSAQIEMNKKREAEFQKMRRDLEEATLQHEATAAT-LRKKHADSVAELGEQIDNLQ 1216
Query: 132 IAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRA 191
K +LE +S+ ++ DL +N E + + +C L +V ++++ E +
Sbjct: 1217 RVKQKLE---KEKSEMKMEIDDLASNAETISKAKGNLEKMCRTLEDQVSELKTKEEEQQR 1273
Query: 192 RLADLTREEAKLLDQVEKLAREVSEKRESM-QTSRSNNRLIDFVMQLKSE 240
+ DLT + A+L + + +R++ EK + Q SRS + +LK +
Sbjct: 1274 LINDLTAQRARLQTEAGEYSRQLDEKDALVSQLSRSKQASTQQIEELKRQ 1323
Score = 57 (25.1 bits), Expect = 0.00027, Sum P(2) = 0.00027
Identities = 21/106 (19%), Positives = 47/106 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGG---GSNPIRGLMGRKATVSTDTSLVKD 477
L++A+++ GG ++ LE + E G + + ++GL + V T ++
Sbjct: 1802 LDEAEQLALKGGKKQIQKLEARVHELEGEVESEQKRNAEAVKGLRKHERRVKELTYQTEE 1861
Query: 478 LEVKEKRLASLETEL--RILSQQKMEVETQLNCTGNELKYKKQEYD 521
RL L +L ++ S ++ E + N K++K +++
Sbjct: 1862 DRKNVLRLQDLVDKLQAKVKSYKRQAEEAEEQSNTNLAKFRKLQHE 1907
>UNIPROTKB|Q13136 [details] [associations]
symbol:PPFIA1 "Liprin-alpha-1" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0004871 "signal transducer activity"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0007160 "cell-matrix adhesion" evidence=TAS] InterPro:IPR001660
InterPro:IPR011510 Pfam:PF07647 PROSITE:PS50105 SMART:SM00454
GO:GO:0005737 GO:GO:0004871 GO:GO:0007160 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
EMBL:U22815 EMBL:U22816 EMBL:AP002336 EMBL:BC034046 EMBL:D49354
IPI:IPI00163496 IPI:IPI00219754 PIR:S55553 RefSeq:NP_003617.1
RefSeq:NP_803172.1 UniGene:Hs.530749 UniGene:Hs.708791
ProteinModelPortal:Q13136 SMR:Q13136 IntAct:Q13136
MINT:MINT-1460222 STRING:Q13136 PhosphoSite:Q13136 DMDM:42558969
PaxDb:Q13136 PRIDE:Q13136 DNASU:8500 Ensembl:ENST00000253925
Ensembl:ENST00000389547 GeneID:8500 KEGG:hsa:8500 UCSC:uc001opn.2
UCSC:uc001opo.3 CTD:8500 GeneCards:GC11P070116 HGNC:HGNC:9245
HPA:CAB017032 MIM:611054 neXtProt:NX_Q13136 PharmGKB:PA33566
eggNOG:NOG322697 HOGENOM:HOG000017513 HOVERGEN:HBG052330
InParanoid:Q13136 OMA:SVPDFRF OrthoDB:EOG40GCQ1 GenomeRNAi:8500
NextBio:31805 PMAP-CutDB:Q13136 ArrayExpress:Q13136 Bgee:Q13136
CleanEx:HS_PPFIA1 Genevestigator:Q13136 GermOnline:ENSG00000131626
Uniprot:Q13136
Length = 1202
Score = 127 (49.8 bits), Expect = 0.00027, P = 0.00027
Identities = 61/254 (24%), Positives = 117/254 (46%)
Query: 3 VLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNM 62
VL +++E T + + + L E +L K + EL+ + ++ E Q + +
Sbjct: 220 VLDINHEQENTPSTSGKRSSDGSLSH-EEDLAKVI---ELQEIISKQSREQSQMKE--RL 273
Query: 63 KNLGEHETKVQQ----------MEQELTANLE-SIKKCTDEMESAKSELKTVEKKGKESN 111
+L H T++++ +E+ L+ +++ + E + + T+EK+
Sbjct: 274 ASLSSHVTELEEDLDTARKDLIKSEEMNTKLQRDVREAMAQKEDMEERITTLEKR----Y 329
Query: 112 VIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL 171
+ + SV + E +IA + + T+ K + LE +K+Q TL + +TL
Sbjct: 330 LAAQREATSVHDLNDKLENEIANKD-SMHRQTEDKNRQLQERLELAEQKLQQTLRKAETL 388
Query: 172 CE---ELTTRVPAMESEIAESRARLADLTRE-EAKLLDQVEKLAREVSEKRESMQTSRSN 227
E EL RV A+ S+ E + + R+ EA+L ++ ++L R + +RE M N
Sbjct: 389 PEVEAELAQRVAAL-SKAEERHGNIEERLRQMEAQLEEKNQELQR--ARQREKMNEEH-N 444
Query: 228 NRLIDFVMQLKSEN 241
RL D V +L SE+
Sbjct: 445 KRLSDTVDKLLSES 458
>UNIPROTKB|P12270 [details] [associations]
symbol:TPR "Nucleoprotein TPR" species:9606 "Homo sapiens"
[GO:0004828 "serine-tRNA ligase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031965 "nuclear membrane" evidence=IDA] [GO:0005643 "nuclear
pore" evidence=IDA] [GO:0007094 "mitotic spindle assembly
checkpoint" evidence=IMP] [GO:0000776 "kinetochore" evidence=IDA]
[GO:0006404 "RNA import into nucleus" evidence=IDA] [GO:0006606
"protein import into nucleus" evidence=IMP;IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0034399 "nuclear periphery"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0042405 "nuclear inclusion body" evidence=IDA]
[GO:0090267 "positive regulation of mitotic cell cycle spindle
assembly checkpoint" evidence=IMP] [GO:0090316 "positive regulation
of intracellular protein transport" evidence=IMP] [GO:1901673
"regulation of spindle assembly involved in mitosis" evidence=IMP]
[GO:0035457 "cellular response to interferon-alpha" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0046832 "negative regulation of RNA export from
nucleus" evidence=IDA;IMP] [GO:0045947 "negative regulation of
translational initiation" evidence=IMP] [GO:0031647 "regulation of
protein stability" evidence=IMP] [GO:0010793 "regulation of mRNA
export from nucleus" evidence=IMP] [GO:0042306 "regulation of
protein import into nucleus" evidence=IMP] [GO:0046825 "regulation
of protein export from nucleus" evidence=IMP] [GO:0005487
"nucleocytoplasmic transporter activity" evidence=IDA] [GO:0031453
"positive regulation of heterochromatin assembly" evidence=IMP]
[GO:0044615 "nuclear pore nuclear basket" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0019898 "extrinsic to membrane"
evidence=IDA] [GO:0043495 "protein anchor" evidence=IMP]
[GO:0051019 "mitogen-activated protein kinase binding"
evidence=IDA] [GO:0070849 "response to epidermal growth factor
stimulus" evidence=IDA] [GO:0000189 "MAPK import into nucleus"
evidence=IMP] [GO:0042307 "positive regulation of protein import
into nucleus" evidence=IMP] [GO:0070840 "dynein complex binding"
evidence=IDA] [GO:0005868 "cytoplasmic dynein complex"
evidence=IDA] [GO:0015631 "tubulin binding" evidence=IDA]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0010965 "regulation
of mitotic sister chromatid separation" evidence=IMP] [GO:0046827
"positive regulation of protein export from nucleus" evidence=ISS]
[GO:0031990 "mRNA export from nucleus in response to heat stress"
evidence=IDA] [GO:0031072 "heat shock protein binding"
evidence=IDA] [GO:0034605 "cellular response to heat" evidence=IDA]
[GO:0003682 "chromatin binding" evidence=IDA] [GO:0003729 "mRNA
binding" evidence=IDA] [GO:0006999 "nuclear pore organization"
evidence=IMP] [GO:0043578 "nuclear matrix organization"
evidence=IMP] [GO:0006611 "protein export from nucleus"
evidence=IMP] [GO:0005215 "transporter activity" evidence=IMP]
[GO:0006405 "RNA export from nucleus" evidence=IMP] [GO:0051292
"nuclear pore complex assembly" evidence=IMP] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0005975 "carbohydrate metabolic
process" evidence=TAS] [GO:0008645 "hexose transport" evidence=TAS]
[GO:0010827 "regulation of glucose transport" evidence=TAS]
[GO:0015758 "glucose transport" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0019221 "cytokine-mediated
signaling pathway" evidence=TAS] [GO:0044281 "small molecule
metabolic process" evidence=TAS] [GO:0055085 "transmembrane
transport" evidence=TAS] Reactome:REACT_111217 Reactome:REACT_15518
InterPro:IPR012929 InterPro:IPR015866 Pfam:PF07926 GO:GO:0005524
GO:GO:0005737 Reactome:REACT_116125 Reactome:REACT_6900
GO:GO:0005654 GO:GO:0016032 GO:GO:0007094 GO:GO:0044281
GO:GO:0005975 GO:GO:0031965 EMBL:CH471067 GO:GO:0005643
GO:GO:0019221 GO:GO:0015758 GO:GO:0010827 GO:GO:0055085
GO:GO:0006606 eggNOG:NOG12793 KO:K09291 GO:GO:0051028 GO:GO:0000777
InterPro:IPR009053 SUPFAM:SSF46579 MIM:188550 Orphanet:146
EMBL:AL133553 EMBL:X62947 PIR:S23741 EMBL:AL596220 GO:GO:0004828
GO:GO:0006434 Gene3D:1.10.287.40 EMBL:X66397 EMBL:Y00672
IPI:IPI00742682 RefSeq:NP_003283.2 UniGene:Hs.279640
ProteinModelPortal:P12270 IntAct:P12270 MINT:MINT-1144652
STRING:P12270 PhosphoSite:P12270 DMDM:215274208 PaxDb:P12270
PRIDE:P12270 Ensembl:ENST00000367478 GeneID:7175 KEGG:hsa:7175
UCSC:uc001grv.3 CTD:7175 GeneCards:GC01M186281 HGNC:HGNC:12017
HPA:HPA019661 HPA:HPA019663 HPA:HPA024336 MIM:189940
neXtProt:NX_P12270 PharmGKB:PA36696 HOGENOM:HOG000139431
HOVERGEN:HBG009158 InParanoid:P12270 OMA:RFIRREK OrthoDB:EOG42RD6D
GenomeRNAi:7175 NextBio:28128 PMAP-CutDB:P12270 ArrayExpress:P12270
Bgee:P12270 CleanEx:HS_TPR Genevestigator:P12270
GermOnline:ENSG00000047410 Uniprot:P12270
Length = 2363
Score = 129 (50.5 bits), Expect = 0.00036, P = 0.00036
Identities = 57/242 (23%), Positives = 107/242 (44%)
Query: 5 YGKYDEERTEKLTRVQLVETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQY--ERYVN 61
Y K E+ R+Q + ++ L+ E+ R + +N +Q ++ + E+
Sbjct: 1354 YRKLLSEKEVHTKRIQQLTEEIGRLKAEIARSNASLTNNQNLIQSLKEDLNKVRTEKETI 1413
Query: 62 MKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSV 121
K+L + K+ + QE + +KK ++ ELK + K E+ S
Sbjct: 1414 QKDL---DAKIIDI-QEKVKTITQVKKIGRRYKTQYEELKAQQDKVMET---------SA 1460
Query: 122 FSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
S+ E ++ E++ T ++ K LE+ +E +Q TL+E++T L +
Sbjct: 1461 QSSGDHQEQHVSVQEMQELKETLNQAETKSKSLESQVENLQKTLSEKETEARNLQEQTVQ 1520
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEK-RESMQTSRSN-NRLIDFVMQLKS 239
++SE++ R L D T +E +L Q+ E EK R+++ ++S L QL
Sbjct: 1521 LQSELSRLRQDLQDRTTQEEQLRQQIT----EKEEKTRKAIVAAKSKIAHLAGVKDQLTK 1576
Query: 240 EN 241
EN
Sbjct: 1577 EN 1578
Score = 111 (44.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 42/209 (20%), Positives = 98/209 (46%)
Query: 20 QLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQEL 79
Q+ E K +E L+++ F + +++K E+ + ++ + + ++ MEQ+L
Sbjct: 981 QVTEEVRKNIEVRLKESAEF---QTQLEKKLMEVEKEKQELQ----DDKRRAIESMEQQL 1033
Query: 80 TANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELEI 139
+ +++ +E++ A T +++ + A+ ++E ++ ++
Sbjct: 1034 SELKKTLSSVQNEVQEALQRASTALSNEQQARRDCQEQAKIAVEAQNKYERELMLHAADV 1093
Query: 140 -FLSTQSKETKKLADLEANLE----KVQTTLTERKTLCEELTTRVPAMESEIAESRARLA 194
L ++ K+A + +LE K ++ L E K EE R ++ E+++ R
Sbjct: 1094 EALQAAKEQVSKMASVRQHLEETTQKAESQLLECKASWEE---RERMLKDEVSKCVCRCE 1150
Query: 195 DLTREEAKLLDQVEKLA-REVSEKRESMQ 222
DL ++ L DQ+EKL+ + V+ +E +Q
Sbjct: 1151 DLEKQNRLLHDQIEKLSDKVVASVKEGVQ 1179
Score = 71 (30.1 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 29/119 (24%), Positives = 58/119 (48%)
Query: 405 LEGAIIEPSETLVAQDLNQAKRIG--YSGGGYRMVTLEGAIIEPSGTMSGGGSNP---IR 459
L+ II+ E + + + Q K+IG Y + + ++E S SG ++
Sbjct: 1417 LDAKIIDIQEKV--KTITQVKKIGRRYKTQYEELKAQQDKVMETSAQSSGDHQEQHVSVQ 1474
Query: 460 GLMGRKATVS-TDT---SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
+ K T++ +T SL +E +K L+ ETE R L +Q ++++++L+ +L+
Sbjct: 1475 EMQELKETLNQAETKSKSLESQVENLQKTLSEKETEARNLQEQTVQLQSELSRLRQDLQ 1533
>UNIPROTKB|E1BUF3 [details] [associations]
symbol:HMMR "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005540 "hyaluronic acid binding" evidence=IEA]
InterPro:IPR026203 GO:GO:0005540 PANTHER:PTHR18956
GeneTree:ENSGT00390000007135 EMBL:AADN02035885 IPI:IPI00581660
Ensembl:ENSGALT00000002670 OMA:QEEHSNT Uniprot:E1BUF3
Length = 687
Score = 124 (48.7 bits), Expect = 0.00029, P = 0.00029
Identities = 58/228 (25%), Positives = 103/228 (45%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALE---PELRKAVNFLELENCVQRKHNEIYQYE 57
++ L+ K E++ EKL ++ ET KALE E++ ELE +R + + Q +
Sbjct: 386 LDKLHAK--EKKAEKLVKLLEKETKSKALELAQMEVKLKGKNAELEQIKERHSSTVLQIQ 443
Query: 58 RYVN--MKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGS 115
+N + LGE+ V + E T E I+ T E S + ++ ++K +++ +
Sbjct: 444 EELNNTLHKLGEN---VAEFESYKTTIAEEIRSLTLENTSLQEQVADLKKTCEDNLQLLQ 500
Query: 116 KFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEEL 175
+ ++ AK EC + L Q+K K A+ E E +T+ + EEL
Sbjct: 501 EAEYTKDKAKE--EC------ARMILEAQTKLALKEAEAERTKESCLIQVTKLQEKLEEL 552
Query: 176 TTRVPAMESEIAESRARL-ADLTREEAKLLDQVEKLAREVSEKRESMQ 222
T + +SE+ ESR + D+T + + L E+ K + Q
Sbjct: 553 TEDLKK-KSEVEESRKTVHEDVTSSLKEEIKTWRNLYEELHNKTKPFQ 599
>UNIPROTKB|F1PCW0 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913
SMART:SM00755 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 OMA:LEDKYNE SUPFAM:SSF101283 EMBL:AAEX03013477
EMBL:AAEX03013478 EMBL:AAEX03013479 Ensembl:ENSCAFT00000007747
Uniprot:F1PCW0
Length = 2240
Score = 118 (46.6 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 57/231 (24%), Positives = 109/231 (47%)
Query: 2 EVLYGKYDEERTEK-LTRVQLVETDLKALEPELR---KAVNFLELENCVQRKHNEIYQYE 57
E ++ + EE EK L ++ + +T+L++L EL KA + LE E V + + + E
Sbjct: 680 ESVFQAHIEEMNEKTLEKLDVKQTELESLSSELSEVLKARDKLEEELSVLKNQADKVKQE 739
Query: 58 RYVNM-KNLGEHETKVQQM--EQELTANL--ESIKKCTDEMESAKSELKTVEKKGKESNV 112
+ + H+ +V + EQEL+ E++K DE+ LK +K KE V
Sbjct: 740 LEAKLDEQKSHHQQQVDSIIKEQELSIQRTEEALK---DEINHLGLLLKEKDKHLKEYQV 796
Query: 113 IGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLC 172
+ ++ E A ++L +F S QS ++ E +L ++Q L + +
Sbjct: 797 RVENLEADI--RRSEEELQQASAKLALFESQQSTTHEQAKASEEHLAQLQQKLLDLEAER 854
Query: 173 EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQT 223
LT +V +E + + +L ++ +L D +++L R+ +E E +Q+
Sbjct: 855 ILLTKQVAEVEMQ---KKDVCTELDTQKIQLQDLMQQLERQKNEMEEKLQS 902
Score = 63 (27.2 bits), Expect = 0.00030, Sum P(2) = 0.00030
Identities = 16/75 (21%), Positives = 40/75 (53%)
Query: 455 SNPIRGLMGRKATVSTDTSLVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
S+ I ++ R + T+ VK+ L +K + + LE +LR L++++ + + ++L
Sbjct: 1258 SSKINAILSRISHCQHHTTKVKEALVIKTCKASELEAQLRQLTEEQNALNSSFRQATHQL 1317
Query: 514 KYKKQEYDTCLIDVK 528
+ K+ + + D++
Sbjct: 1318 EEKENQIKSMKADIE 1332
>SGD|S000002764 [details] [associations]
symbol:SPC110 "Inner plaque spindle pole body (SPB)
component" species:4932 "Saccharomyces cerevisiae" [GO:0005816
"spindle pole body" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000742 "karyogamy involved in conjugation with
cellular fusion" evidence=IGI;IMP] [GO:0005200 "structural
constituent of cytoskeleton" evidence=IPI] [GO:0005823 "central
plaque of spindle pole body" evidence=IDA] [GO:0005822 "inner
plaque of spindle pole body" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0007020 "microtubule nucleation"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] SGD:S000002764
GO:GO:0005634 GO:GO:0005200 EMBL:BK006938 eggNOG:NOG12793
GO:GO:0007020 EMBL:U28372 KO:K15262 RefSeq:NP_010648.3
GeneID:851963 KEGG:sce:YDR361C GO:GO:0000742 GO:GO:0005823
GeneTree:ENSGT00700000104848 RefSeq:NP_010643.3 GeneID:851957
KEGG:sce:YDR356W EMBL:Z11582 EMBL:X73297 PIR:S26710 PDB:4DS7
PDBsum:4DS7 ProteinModelPortal:P32380 SMR:P32380 DIP:DIP-702N
IntAct:P32380 MINT:MINT-644728 STRING:P32380 PaxDb:P32380
PeptideAtlas:P32380 EnsemblFungi:YDR356W CYGD:YDR356w OMA:EVRHNND
OrthoDB:EOG4F4WKW NextBio:970062 Genevestigator:P32380
GermOnline:YDR356W GO:GO:0005822 Uniprot:P32380
Length = 944
Score = 116 (45.9 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 48/235 (20%), Positives = 113/235 (48%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQR-KHNEIYQYERYVNMKNLGEH 68
EER + ++ +E LK ++ ++ + N ++++ R K +E+ M L E
Sbjct: 227 EEREQMERKLAELERKLKTVKDQVLELENNSDVQSLKLRSKEDELKNL-----MNELNEL 281
Query: 69 ETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRF 128
++ ++ + +L ++K T+E+ K + ++ + K+ + + + +T+F
Sbjct: 282 KSNAEEKDTQLEFKKNELRKRTNELNELKIKSDEMDLQLKQKQNESKRLKDELNELETKF 341
Query: 129 ECDIAKSELEIFLSTQSKETK-KLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIA 187
+ ++S + + K K K+A+LE + + L ++ L ++ +ES++
Sbjct: 342 SENGSQSSAK---ENELKMLKNKIAELEEEISTKNSQLIAKEGKLASLMAQLTQLESKLN 398
Query: 188 ESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKS-EN 241
+ ++L +REE +L +KL +++ RE +T + R+ID ++K EN
Sbjct: 399 QRDSQLG--SREE-ELKKTNDKLQKDIRIARE--ETVSKDERIIDLQKKVKQLEN 448
Score = 112 (44.5 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 49/250 (19%), Positives = 112/250 (44%)
Query: 3 VLYGKYDEERTEK-LTRVQLVETDLKALEPELRKAVN---FLE-----LENCVQRKHNEI 53
+ Y D E + ++ ++ ++K L E +N LE L+N +Q E+
Sbjct: 148 ITYANSDISNKELYINEIKSLKHEIKELRKEKNDTLNNYDTLEEETDDLKNRLQALEKEL 207
Query: 54 YQYERYVNMKNLGEHETKVQQMEQ------ELTANLESIKKCTDEMESAKSELKTVEKKG 107
+ VN + + +H +++ EQ EL L+++K E+E+ S++++++ +
Sbjct: 208 DAKNKIVNSRKVDDHSGCIEEREQMERKLAELERKLKTVKDQVLELEN-NSDVQSLKLRS 266
Query: 108 KESNVIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTE 167
KE + + + E D ++LE + K T +L +L+ +++ L +
Sbjct: 267 KEDELKNLMNELNELKSNAE-EKD---TQLEFKKNELRKRTNELNELKIKSDEMDLQLKQ 322
Query: 168 RKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN 227
++ + L + +E++ +E+ ++ + E L +++ +L E+S K Q
Sbjct: 323 KQNESKRLKDELNELETKFSENGSQSSAKENELKMLKNKIAELEEEISTKNS--QLIAKE 380
Query: 228 NRLIDFVMQL 237
+L + QL
Sbjct: 381 GKLASLMAQL 390
Score = 57 (25.1 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 465 KATVSTDTSLV-KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
K T S ++ +LE K+K + LE +L++ ++ ++E +L E YK E
Sbjct: 454 KKTHSESKTITDNELESKDKLIKILENDLKVAQEKYSKMEKELK--EREFNYKISE 507
>UNIPROTKB|Q90631 [details] [associations]
symbol:KTN1 "Kinectin" species:9031 "Gallus gallus"
[GO:0007018 "microtubule-based movement" evidence=IEA] [GO:0019894
"kinesin binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] InterPro:IPR024854 GO:GO:0016021 GO:GO:0005789
GO:GO:0007018 EMBL:U15617 IPI:IPI00574217 RefSeq:NP_990707.1
UniGene:Gga.3640 ProteinModelPortal:Q90631 STRING:Q90631
PRIDE:Q90631 GeneID:396335 KEGG:gga:396335 CTD:3895
eggNOG:NOG149793 HOGENOM:HOG000113267 HOVERGEN:HBG007851
InParanoid:Q90631 OrthoDB:EOG4Z62N5 NextBio:20816383
PANTHER:PTHR18864 Uniprot:Q90631
Length = 1364
Score = 124 (48.7 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 67/246 (27%), Positives = 115/246 (46%)
Query: 10 EERTEKL-TRVQLVETDLKALEPELRKAVNFL----ELENCVQRKHNEIYQYERYVNMKN 64
EE + L T + +L++L+ +L + V+F EL+ + K +I E + +
Sbjct: 765 EEELKVLRTENSSLRKELQSLQIQLSEQVSFQSLVDELQKVIHEKDGKIKSVEELLQAEI 824
Query: 65 L--GEHETKVQQMEQELTANLESIKKCTDEME---SAKSELKTVEK--KGKESNVIGSKF 117
L E VQ + Q++ A E + EME S S++K ++ KGKE+ V
Sbjct: 825 LKVANKEKTVQALTQKIEALKEEVGNSQLEMEKQVSITSQVKELQTLLKGKENQV----- 879
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANL-EKVQTTLTERKTLCEELT 176
KT E + + E EI + + K D A L KVQ E++ L ++L
Sbjct: 880 -------KT-MEALLEEKEKEIV--QKGERLKGQQDTVAQLTSKVQEL--EQQNL-QQLQ 926
Query: 177 TRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDF-VM 235
+VPA S++ + +RL + +KL +E+ RE++ + + +QT +S N +
Sbjct: 927 -QVPAA-SQVQDLESRLRGEEEQISKLKAVLEEKEREIASQVKQLQTMQSENESFKVQIQ 984
Query: 236 QLKSEN 241
+LK EN
Sbjct: 985 ELKQEN 990
Score = 52 (23.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 18/59 (30%), Positives = 31/59 (52%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVET---QLNCTGNELKYKKQEYDTCLIDVKSPK 531
K+L+ +ASLE E+ L ++ EVET + +EL+ + E T + +V+ K
Sbjct: 1179 KELKQMRSSVASLEHEVERLKEEIKEVETLKKEREHLESELEKAEIERSTYVSEVRELK 1237
>ZFIN|ZDB-GENE-060929-860 [details] [associations]
symbol:cenpe "centromere protein E" species:7955
"Danio rerio" [GO:0003777 "microtubule motor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007018
"microtubule-based movement" evidence=IEA] [GO:0005875 "microtubule
associated complex" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
InterPro:IPR001752 InterPro:IPR019821 Pfam:PF00225 PRINTS:PR00380
PROSITE:PS00411 PROSITE:PS50067 SMART:SM00129
ZFIN:ZDB-GENE-060929-860 GO:GO:0005524 GO:GO:0005875 GO:GO:0005874
GO:GO:0003777 GO:GO:0007018 Gene3D:3.40.850.10
GeneTree:ENSGT00680000099922 EMBL:CU179747 IPI:IPI01017029
Ensembl:ENSDART00000111806 Uniprot:E7F2U4
Length = 2690
Score = 127 (49.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 54/248 (21%), Positives = 113/248 (45%)
Query: 8 YDEERTEKLTRVQLVETDLKALEPELR-KAVNFLELENCVQRKHNE-IYQYERYVNMKNL 65
+ E+R+E R+Q +E D ++ L K L+L++ +Q K + I ++ +
Sbjct: 1156 FTEQRSELQERLQQLERDSDTMKTHLEEKEQTILQLQSELQEKQQQQILDQDQQDFSEEK 1215
Query: 66 GEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKK----GKESNVIGSKFRWSV 121
+ ++Q +++EL A LE + T +E + ++ V ++ +E + + S + SV
Sbjct: 1216 TDELQQIQTLKEELEAVLEQKNQLTLRLEESAQQVCVVSEELRSVREERDAVCSA-QASV 1274
Query: 122 FSAKTRFECDIAKSELEIF------LSTQSKETKKLADLEANLEKVQTTLTERKTLCEEL 175
A R D + ++ ++ L Q KET+ +L N +++ TE TL
Sbjct: 1275 SEAHQRLTVDYSTAQHQLLQMESDLLEAQLKETQLSQELSDNTQQLHNMQTENDTLL--- 1331
Query: 176 TTRVPAMESEIAESRARLADLTREEAKLL-DQVEKLAREVSEKRESMQTSRSNNRLIDFV 234
T + + + + A LA + E LL +++E + E+ R ++ + + + +
Sbjct: 1332 -TSLQETQQKCEQLSADLASVCAERDLLLSEKMEGESEELQSLRNTISSITEEKQQMQEI 1390
Query: 235 MQLKSENR 242
+Q E R
Sbjct: 1391 LQSLREQR 1398
Score = 55 (24.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 30/133 (22%), Positives = 61/133 (45%)
Query: 405 LEGAIIEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGA--IIEPSGTMSGGG---SNPIR 459
L+ A E +V +D + + S GG L+G +I+ G + S+P+
Sbjct: 1826 LQSACAERDSLMVERDQSSSCS-ALSDGGDLQEILQGVRELIQVQGELKQKKHQHSDPLS 1884
Query: 460 GLMGRKATVSTDTSLVKDLE-VKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQ 518
+KA + SL ++E ++ +R+ L +L + + L+ + ELK +++
Sbjct: 1885 PTHKQKAQLQQLQSLTTEMESLRNERMV-LRKDLEDAAATSKMYQELLHVSKEELKQQQK 1943
Query: 519 EYDTCLIDVKSPK 531
E +T L++ S +
Sbjct: 1944 E-NTELMEQSSAR 1955
>UNIPROTKB|E1C782 [details] [associations]
symbol:E1C782 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000796 "condensin complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007076 "mitotic
chromosome condensation" evidence=IEA] InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005694 GO:GO:0051276
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
IPI:IPI00579121 EMBL:AADN02057751 EMBL:AADN02057752
EMBL:AADN02057753 EMBL:AADN02057754 EMBL:AADN02057755
Ensembl:ENSGALT00000025306 ArrayExpress:E1C782 Uniprot:E1C782
Length = 1190
Score = 117 (46.2 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 415 TLVAQDLNQAKRIGYSGGGYRM-VTLEGAIIEPSGTMSGGGSNPIRGLMGRKATV--STD 471
TLV ++ AK++ + R VTL+G I +P GT+SGG S+ + ++ + T+ + D
Sbjct: 627 TLVCSSMDNAKKVTFDKRIMRKTVTLQGDIFDPQGTLSGGASSHVTPILSKLKTMRDAED 686
Query: 472 TSLVK--DLEVKEKRLASLET---ELRILSQQ---KMEVETQLNCTGNELKYKKQEYD 521
+K LE EK LA+L+ + + L QQ K E L + Y KQ+ D
Sbjct: 687 ELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQED 744
Score = 58 (25.5 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 28/116 (24%), Positives = 47/116 (40%)
Query: 14 EKL--TRVQLVETDLKALEPE-LRK---AVNFLELENCVQRKHNEIYQYERYVNMKNLGE 67
EKL R +E E E LR+ A ++ E R N + E N K + E
Sbjct: 209 EKLKEARASYLEYQKMTREVENLRRIYVAFQYVRAEEIKDRSTNALK--EAQANKKKIFE 266
Query: 68 HETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKF--RWSV 121
+ ++ +EL +E +K +E+ K KT + + E + K +W +
Sbjct: 267 SMAENEKKVKELAQQIEETEKKNNEVNYPKLT-KTCKDRSLEGVCVSDKMHLKWEI 321
Score = 54 (24.1 bits), Expect = 0.00082, Sum P(2) = 0.00082
Identities = 29/108 (26%), Positives = 53/108 (49%)
Query: 85 SIKKCTD---EMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELEIFL 141
S K+C +++ A+ ELKT K++ V K S + FE I K++ + L
Sbjct: 412 SCKQCLQAQMKLKYAQQELKT-----KQAEV--KKMDGSYKEDQEAFEA-IRKTKEK--L 461
Query: 142 STQSKETK-KLADLEANLEK---VQTTLTERKTLCEELTTRVPAMESE 185
+ K+ K + A+ EA+L K + + ++ + LCE + + P + E
Sbjct: 462 QDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPYLRFE 509
>UNIPROTKB|F1LSI0 [details] [associations]
symbol:Myh4 "Myosin-4" species:10116 "Rattus norvegicus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016459 "myosin complex" evidence=IEA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 RGD:3139 GO:GO:0005524
GO:GO:0003774 GO:GO:0016459 InterPro:IPR015650
PANTHER:PTHR13140:SF22 IPI:IPI00388776 Ensembl:ENSRNOT00000004157
ArrayExpress:F1LSI0 Uniprot:F1LSI0
Length = 1926
Score = 127 (49.8 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 50/220 (22%), Positives = 107/220 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 961 LELTLAKVEKEKHATENKVKNLTEEMAGLDENIAKLTKEKKALQEAHQQTLDDLQAEEDK 1020
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1021 VN--TLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESTM------- 1071
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + + + K E E+ + QSK + D +A ++Q + E + EEL +
Sbjct: 1072 DIENDKQQLDEKLKKKEFEMS-NLQSK----IEDEQALGMQLQKKIKELQARIEELEEEI 1126
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRE 219
A + A++ + +DL+RE ++ +++E+ S + E
Sbjct: 1127 EAERASRAKAEKQRSDLSRELEEISERLEEAGGATSAQIE 1166
Score = 52 (23.4 bits), Expect = 0.00032, Sum P(2) = 0.00032
Identities = 24/105 (22%), Positives = 46/105 (43%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMG-RK-------ATVSTDT 472
L++A+++ GG ++ LE + E + I + G RK T T+
Sbjct: 1801 LDEAEQLALKGGKKQIQKLEARVRELENEVENEQKRNIEAVKGLRKHERRVKELTYQTEE 1860
Query: 473 SLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK 517
L +++ + L+T+++ +Q E E Q N N K++K
Sbjct: 1861 DRKNVLRLQDL-VDKLQTKVKAYKRQAEEAEEQSNV--NLAKFRK 1902
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 13/47 (27%), Positives = 23/47 (48%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDT 522
K ++ E R+ LE E+ ++QK +E +E + K+ Y T
Sbjct: 1814 KQIQKLEARVRELENEVE--NEQKRNIEAVKGLRKHERRVKELTYQT 1858
>UNIPROTKB|F1NM49 [details] [associations]
symbol:MYH15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00650000092896 IPI:IPI00820122 EMBL:AADN02032752
Ensembl:ENSGALT00000036887 ArrayExpress:F1NM49 Uniprot:F1NM49
Length = 1936
Score = 123 (48.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 52/227 (22%), Positives = 109/227 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 957 LEITLAKVEKEKHATENKVKNLTEEMATLDENISKLTKEKKSLQEAHQQVLDDLQAEEDK 1016
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1017 VN--TLSKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESVM------- 1067
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + E + K E E+ S+ K+ D +A + ++Q + E + EEL +
Sbjct: 1068 DLENDKLQMEEKLKKKEFEM-----SQLNSKIEDEQAIVMQLQKKIKELQARIEELEEEL 1122
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAR------EVSEKRES 220
A + A+ + +DL RE +L +++E+ E+++KRE+
Sbjct: 1123 EAERAARAKVEKQRSDLARELEELSERLEEAGGATAAQLEMNKKREA 1169
Score = 56 (24.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 26/108 (24%), Positives = 45/108 (41%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + G + L E
Sbjct: 1797 LDEAEQIALKGGKKQIQKLESRVRELENELENELRRNSDAQKGARKFERRIKELTYQSEE 1856
Query: 481 KEKRLASLET-----ELRILS--QQKMEVETQLNCTGNELKYKKQEYD 521
+K LA ++ +L++ S Q E E Q N + KY+KQ++D
Sbjct: 1857 DKKNLARMQDLIDKLQLKVKSYKHQAEEAEAQANLYLS--KYRKQQHD 1902
>UNIPROTKB|F1NKL9 [details] [associations]
symbol:MYH15 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003774 "motor activity" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
GeneTree:ENSGT00650000092896 EMBL:AADN02032752 IPI:IPI00577818
Ensembl:ENSGALT00000024788 OMA:HYEATAA ArrayExpress:F1NKL9
Uniprot:F1NKL9
Length = 1943
Score = 123 (48.4 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 52/227 (22%), Positives = 109/227 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 964 LEITLAKVEKEKHATENKVKNLTEEMATLDENISKLTKEKKSLQEAHQQVLDDLQAEEDK 1023
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1024 VN--TLSKAKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESVM------- 1074
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + E + K E E+ S+ K+ D +A + ++Q + E + EEL +
Sbjct: 1075 DLENDKLQMEEKLKKKEFEM-----SQLNSKIEDEQAIVMQLQKKIKELQARIEELEEEL 1129
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAR------EVSEKRES 220
A + A+ + +DL RE +L +++E+ E+++KRE+
Sbjct: 1130 EAERAARAKVEKQRSDLARELEELSERLEEAGGATAAQLEMNKKREA 1176
Score = 56 (24.8 bits), Expect = 0.00034, Sum P(2) = 0.00034
Identities = 26/108 (24%), Positives = 45/108 (41%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + G + L E
Sbjct: 1804 LDEAEQIALKGGKKQIQKLESRVRELENELENELRRNSDAQKGARKFERRIKELTYQSEE 1863
Query: 481 KEKRLASLET-----ELRILS--QQKMEVETQLNCTGNELKYKKQEYD 521
+K LA ++ +L++ S Q E E Q N + KY+KQ++D
Sbjct: 1864 DKKNLARMQDLIDKLQLKVKSYKHQAEEAEAQANLYLS--KYRKQQHD 1909
>FB|FBgn0027783 [details] [associations]
symbol:SMC2 "SMC2" species:7227 "Drosophila melanogaster"
[GO:0007062 "sister chromatid cohesion" evidence=ISS] [GO:0008278
"cohesin complex" evidence=ISS] [GO:0003677 "DNA binding"
evidence=ISS] [GO:0000796 "condensin complex" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007076 "mitotic chromosome condensation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR024704 InterPro:IPR010935
InterPro:IPR027120 Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968
InterPro:IPR003395 Pfam:PF02463 EMBL:AE013599 GO:GO:0005524
GO:GO:0005634 GO:GO:0005875 GO:GO:0007052 GO:GO:0022008
GO:GO:0006281 GO:GO:0006310 GO:GO:0007076 GO:GO:0000796
GO:GO:0007062 SUPFAM:SSF75553 GeneTree:ENSGT00550000074857
KO:K06674 PANTHER:PTHR18937:SF9 OMA:CQNGKIP CTD:10592 HSSP:Q9X0R4
EMBL:AF179287 RefSeq:NP_610995.1 UniGene:Dm.2168 SMR:Q7KK96
STRING:Q7KK96 EnsemblMetazoa:FBtr0087461 GeneID:36653
KEGG:dme:Dmel_CG10212 UCSC:CG10212-RA FlyBase:FBgn0027783
InParanoid:Q7KK96 OrthoDB:EOG4P5HR3 GenomeRNAi:36653 NextBio:799708
Uniprot:Q7KK96
Length = 1179
Score = 126 (49.4 bits), Expect = 0.00034, P = 0.00034
Identities = 115/527 (21%), Positives = 205/527 (38%)
Query: 26 LKALEPELRKAVNFLELE--NCVQRKHNEIYQYERYVNM--KNLGEHETKVQQMEQELT- 80
+K LE +L A LE ++ I Q E+ + M KN+ + E + + E ++
Sbjct: 296 IKNLETQL-SAKRALEATATGSLKAAQGTIQQDEKKIRMASKNIEDDERALAKKEADMAK 354
Query: 81 --ANLESIKKC----TDEMESAKSELKTVEKKGKESNVIG--SKFRWSVFSAKTRF---E 129
ES+K+ + E A+ +L+ V + G +N G S + + AK +F +
Sbjct: 355 VQGEFESLKEADARDSKAYEDAQKKLEAVSQ-GLSTNENGEASTLQEQLIVAKEQFSEAQ 413
Query: 130 CDIAKSELEIFLSTQSKETKK-LADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAE 188
I SE+E+ + T+ L E + + K L ++L + +E ++
Sbjct: 414 TTIKTSEIEL------RHTRGVLKQREGETQTNDAAYVKDKKLHDQLVVEIKNLERQLQS 467
Query: 189 SRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRVSXXXX 248
+ + + D + R++ + + SR + + D + + R
Sbjct: 468 LDYEGGHFEKLKQRRND-LHMRKRDLKRELDRCNASRYDLQYQD--PEPNFDRRKVRGLV 524
Query: 249 XXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVIPLDKMQQY 308
Q V TA G+L VT+ + ++ Q RV +IP++K+Q
Sbjct: 525 GKLFQVKDMQNSMALVQTAGGSLYSYVTDDDVTSKKILQRGNLQR--RVTLIPINKIQSG 582
Query: 309 HSQC----YDKYRT-PENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKRIGYSG 363
Y + + ENV + LI D F TL+ +DL AK+I Y
Sbjct: 583 SLNRNVVEYAQNKVGAENVQWAMSLIDY-DRYYEPVMKFCFGGTLICKDLIVAKQISYDP 641
Query: 364 G-GYRMVTLEGAIIEPSETL----------VAQDLNQAKRIGYSGGGYRMVTLEGAIIEP 412
R VTLEG +++P T+ V ++L+ K+I YR + E A +E
Sbjct: 642 RINCRSVTLEGDVVDPHGTVSGGAAPKGANVLEELHAIKQIEKE---YREIDSEIAQVEK 698
Query: 413 SETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDT 472
+A NQA + E + E + N R+ + +
Sbjct: 699 Q---IASIENQALAFNKMKENLDLRQHELTMCENRLAQTTFQQNQAEIEEMRERVKTLEQ 755
Query: 473 SLVKDLEVKEKRLASL-ETELRILSQQKMEVETQLNCTGNELKYKKQ 518
++ E ++ A + + E + L+ K E +LN NE+K KQ
Sbjct: 756 QIIDSREKQKTSQAKIVDIEAK-LADAKGYRERELNAATNEIKVTKQ 801
>UNIPROTKB|P35580 [details] [associations]
symbol:MYH10 "Myosin-10" species:9606 "Homo sapiens"
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001778 "plasma membrane repair"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006887 "exocytosis"
evidence=IEA] [GO:0006930 "substrate-dependent cell migration, cell
extension" evidence=IEA] [GO:0007097 "nuclear migration"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0008360
"regulation of cell shape" evidence=IEA] [GO:0016460 "myosin II
complex" evidence=IEA] [GO:0021592 "fourth ventricle development"
evidence=IEA] [GO:0021670 "lateral ventricle development"
evidence=IEA] [GO:0021678 "third ventricle development"
evidence=IEA] [GO:0021680 "cerebellar Purkinje cell layer
development" evidence=IEA] [GO:0030424 "axon" evidence=IEA]
[GO:0030426 "growth cone" evidence=IEA] [GO:0031594 "neuromuscular
junction" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0043197 "dendritic spine" evidence=IEA]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0055003 "cardiac myofibril assembly"
evidence=IEA] [GO:0055015 "ventricular cardiac muscle cell
development" evidence=IEA] [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0016459 "myosin complex"
evidence=NAS] [GO:0003779 "actin binding" evidence=NAS] [GO:0005524
"ATP binding" evidence=IDA;NAS] [GO:0030496 "midbody" evidence=IDA]
[GO:0032154 "cleavage furrow" evidence=IDA] [GO:0001725 "stress
fiber" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005938 "cell cortex" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000146 "microfilament motor activity"
evidence=IDA] [GO:0000281 "cytokinesis after mitosis" evidence=IDA]
[GO:0030048 "actin filament-based movement" evidence=IDA]
[GO:0030898 "actin-dependent ATPase activity" evidence=IDA]
[GO:0043531 "ADP binding" evidence=IDA] [GO:0051015 "actin filament
binding" evidence=IDA] [GO:0007411 "axon guidance" evidence=TAS]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005886 GO:GO:0005524
GO:GO:0005938 Reactome:REACT_111045 GO:GO:0007411 GO:GO:0001764
EMBL:CH471108 GO:GO:0005819 GO:GO:0008360 GO:GO:0008283
GO:GO:0030424 GO:GO:0043025 GO:GO:0001701 GO:GO:0043197
GO:GO:0031594 GO:GO:0050885 GO:GO:0051015 GO:GO:0043531
GO:GO:0030426 GO:GO:0060041 GO:GO:0000281 GO:GO:0000146
GO:GO:0001725 GO:GO:0055003 GO:GO:0006887 GO:GO:0007512
GO:GO:0030496 GO:GO:0032154 GO:GO:0030048 GO:GO:0021670
GO:GO:0007097 eggNOG:COG5022 GO:GO:0055015 GO:GO:0021680
GO:GO:0016459 GO:GO:0001778 GO:GO:0006930 GO:GO:0021678
GO:GO:0021592 GO:GO:0016460 GO:GO:0030898 CTD:4628
HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1
SUPFAM:SSF50084 EMBL:M69181 EMBL:AB210026 EMBL:AC011061
EMBL:AC025518 EMBL:AC026130 EMBL:BC008968 EMBL:BC117690
EMBL:BC117691 EMBL:U15618 EMBL:S67247 IPI:IPI00397526
IPI:IPI00479307 IPI:IPI00790503 PIR:A59252 PIR:I65769
RefSeq:NP_001242941.1 RefSeq:NP_005955.3 UniGene:Hs.16355
ProteinModelPortal:P35580 SMR:P35580 DIP:DIP-31110N IntAct:P35580
MINT:MINT-1133516 STRING:P35580 PhosphoSite:P35580 DMDM:215274129
PaxDb:P35580 PRIDE:P35580 Ensembl:ENST00000269243
Ensembl:ENST00000360416 Ensembl:ENST00000396239 GeneID:4628
KEGG:hsa:4628 UCSC:uc002gll.3 GeneCards:GC17M008318
H-InvDB:HIX0013525 HGNC:HGNC:7568 HPA:CAB017180 MIM:160776
neXtProt:NX_P35580 PharmGKB:PA31366 PhylomeDB:P35580 ChiTaRS:MYH10
GenomeRNAi:4628 NextBio:17814 ArrayExpress:P35580 Bgee:P35580
CleanEx:HS_MYH10 Genevestigator:P35580 GermOnline:ENSG00000133026
Uniprot:P35580
Length = 1976
Score = 128 (50.1 bits), Expect = 0.00037, P = 0.00037
Identities = 76/358 (21%), Positives = 159/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 1538 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-IK 1596
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 1597 QVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1654
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1655 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1712
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EI S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1713 LADEITNSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1770
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1771 AELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1828
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1829 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1884
>RGD|620054 [details] [associations]
symbol:Ppfia3 "protein tyrosine phosphatase, receptor type, f
polypeptide (PTPRF), interacting protein (liprin), alpha 3"
species:10116 "Rattus norvegicus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007269
"neurotransmitter secretion" evidence=IMP] [GO:0009986 "cell
surface" evidence=IEA] [GO:0048172 "regulation of short-term
neuronal synaptic plasticity" evidence=IMP] InterPro:IPR001660
InterPro:IPR011510 Pfam:PF07647 PROSITE:PS50105 SMART:SM00454
RGD:620054 GO:GO:0005737 GO:GO:0009986 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
GO:GO:0007269 GO:GO:0048172 eggNOG:NOG322697 HOGENOM:HOG000017513
HOVERGEN:HBG052330 OrthoDB:EOG4X6C7K EMBL:AABR03000917
EMBL:AY057065 IPI:IPI00365736 UniGene:Rn.231996
ProteinModelPortal:Q91Z79 MINT:MINT-1794446 STRING:Q91Z79
PhosphoSite:Q91Z79 PRIDE:Q91Z79 UCSC:RGD:620054 InParanoid:Q91Z79
ArrayExpress:Q91Z79 Genevestigator:Q91Z79
GermOnline:ENSRNOG00000020731 Uniprot:Q91Z79
Length = 1192
Score = 125 (49.1 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 54/211 (25%), Positives = 110/211 (52%)
Query: 41 ELENCVQRKHNEIYQY-ERY-VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKS 98
ELE ++R+ E+ Q ER V + + + E ++ +EL E+ K +++ A +
Sbjct: 237 ELEEALERQRAEVCQLRERLAVLCRQMSQLEEELGTAHRELGKAEEANSKLQRDLKEALA 296
Query: 99 ELKTVEKK--GKESNVIGSKFR-WSVFSAKTRFECDIAKSELEIFLSTQSKETKKLAD-L 154
+ + +E++ E + ++ S+ A + E ++A E ++ ++ K +++LA+ L
Sbjct: 297 QREDMEERITTLEKRYLSAQREATSLHDANDKLENELASKE-SLYRQSEEK-SRQLAEWL 354
Query: 155 EANLEKVQTTLTERKTLCE---ELTTRVPAMESEIAESRARLADLTRE-EAKLLDQVEKL 210
+ +K+Q TL + +TL E +L RV A+ ++ E + R+ EA+L ++ ++L
Sbjct: 355 DDAKQKLQQTLQKAETLPEIEAQLAQRVAAL-NKAEERHGNFEERLRQLEAQLEEKNQEL 413
Query: 211 AREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
R + +RE M N RL + V +L SE+
Sbjct: 414 QR--ARQREKMNDDH-NKRLSETVDKLLSES 441
Score = 49 (22.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 16/82 (19%), Positives = 41/82 (50%)
Query: 438 TLEGAIIEP-SGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEVK-EKRLASLETELRIL 495
T G+I P G + G G+ G + + + V+ L + +++L ++ E++++
Sbjct: 560 TPAGSIPPPFPGELDGSDEEETEGMFGAELLSPSGQADVQTLAIMLQEQLEAINKEIKLI 619
Query: 496 SQQKM-------EVETQLNCTG 510
++K E+E++++ +G
Sbjct: 620 QEEKETTEQRAEELESRVSSSG 641
>UNIPROTKB|F8W6L6 [details] [associations]
symbol:MYH10 "Myosin-10" species:9606 "Homo sapiens"
[GO:0003774 "motor activity" evidence=IEA] [GO:0051015 "actin
filament binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR008989 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005524 GO:GO:0003774
GO:GO:0016459 SUPFAM:SSF50084 EMBL:AC011061 EMBL:AC025518
EMBL:AC026130 HGNC:HGNC:7568 ChiTaRS:MYH10 IPI:IPI01025705
ProteinModelPortal:F8W6L6 SMR:F8W6L6 PRIDE:F8W6L6
Ensembl:ENST00000379980 ArrayExpress:F8W6L6 Bgee:F8W6L6
Uniprot:F8W6L6
Length = 1992
Score = 128 (50.1 bits), Expect = 0.00038, P = 0.00038
Identities = 76/358 (21%), Positives = 159/358 (44%)
Query: 10 EERTEKL-TRVQLVETDLKALEP-ELRKAVNF----LELENCVQRKHNEIYQYERYVNMK 63
E++ E++ T+++ +E +L+A E +LR VN + E +Q + + + +R + +K
Sbjct: 1554 EQQVEEMRTQLEELEDELQATEDAKLRLEVNMQAMKAQFERDLQTRDEQNEEKKRLL-IK 1612
Query: 64 NLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFS 123
+ E E +++ ++ + S KK +++ +++++ K E VI +
Sbjct: 1613 QVRELEAELEDERKQRALAVASKKKMEIDLKDLEAQIEAANKARDE--VIKQLRKLQAQM 1670
Query: 124 AKTRFECDIAK-SELEIFLSTQSKET-KKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ E + A+ S EIF QSKE+ KKL LEA + ++Q L +
Sbjct: 1671 KDYQRELEEARASRDEIF--AQSKESEKKLKSLEAEILQLQEELASSERARRHAEQERDE 1728
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
+ EI S + + L E+ +L ++ +L E+ E++ +M+ N+R +Q+ + N
Sbjct: 1729 LADEITNSASGKSALLDEKRRLEARIAQLEEELEEEQSNMELL--NDRFRKTTLQVDTLN 1786
Query: 242 -RVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQNVGRVNVI 300
++ Q+ + L + +A I+A++ + +G++
Sbjct: 1787 AELAAERSAAQKSDNARQQLERQNKELKAKLQELEGAVKSKFKATISALEAK-IGQLEE- 1844
Query: 301 PLDKMQQYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRETLVAQDLNQAKR 358
L++ + + R E + I +QV+DE+ Y E A+ + Q KR
Sbjct: 1845 QLEQEAKERAAANKLVRRTEKKLKEI-FMQVEDERRHADQYKEQMEKANAR-MKQLKR 1900
>ZFIN|ZDB-GENE-020424-4 [details] [associations]
symbol:lmnl3 "lamin L3" species:7955 "Danio rerio"
[GO:0005198 "structural molecule activity" evidence=IEA]
[GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 ZFIN:ZDB-GENE-020424-4 GO:GO:0005198
GO:GO:0005882 HOVERGEN:HBG013015 InterPro:IPR016044
InterPro:IPR018039 PANTHER:PTHR23239 Pfam:PF00038 PROSITE:PS00226
InterPro:IPR001322 Pfam:PF00932 HSSP:P08670 EMBL:AF397015
IPI:IPI00499884 UniGene:Dr.80387 ProteinModelPortal:Q90XD8
SMR:Q90XD8 STRING:Q90XD8 InParanoid:Q90XD8 ArrayExpress:Q90XD8
Uniprot:Q90XD8
Length = 584
Score = 117 (46.2 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 52/247 (21%), Positives = 117/247 (47%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELR-KAVNFLELENCVQRKHNEIYQYERYVNMKNL 65
+ + E +E T+V +E L+ ++ +L + + ++ EN +Q ++ +++++ + +
Sbjct: 166 RLETEISELKTQVPALEAALQKVKTQLNSEMLRRVDAENQIQTLQEQL-DFQKHLGEQEV 224
Query: 66 GE----HETKVQQME----QELTANL-ESIKKCTDEMESAKSELKT-VEK--KGKESNVI 113
E HE+++ +++ +E L E++K+ DE E+ + K +EK K N
Sbjct: 225 REMRSRHESRLLELDCGRQKEFEGKLAEAMKQLRDEHETQIRQYKDELEKTFNAKLENAK 284
Query: 114 GSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCE 173
+ + S F+ T+ E K LE + K++ LEA + ++Q TL + + +
Sbjct: 285 QTAVKNSDFAFSTKEELAGTKLRLESQTQQINNLQKQVVCLEARVLELQQTLEHERQVSQ 344
Query: 174 ELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN-NRLID 232
+ ++ + E+A R ++ + E LLD L E++ R+ ++ N+ +
Sbjct: 345 Q---KLSLQQQEMAALRLQMQEQLEEYENLLDVKLMLDMEINAYRKMLEGEEKRLNQSLS 401
Query: 233 FVMQLKS 239
+ Q S
Sbjct: 402 PIQQTLS 408
Score = 50 (22.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 16/53 (30%), Positives = 27/53 (50%)
Query: 476 KDLEVKEKRL-ASL----ETELRILSQQKMEVETQLNCTGNELKYKKQEYDTC 523
K LE +EKRL SL +T I+ Q + + + C+G Y+ ++ +C
Sbjct: 387 KMLEGEEKRLNQSLSPIQQTLSPIIQQSRKKRKHDATCSGFSPNYRLSQHSSC 439
>WB|WBGene00004955 [details] [associations]
symbol:spd-5 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0007052 "mitotic spindle organization"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0051301 "cell division" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0035046 "pronuclear migration"
evidence=IMP] [GO:0007020 "microtubule nucleation" evidence=IMP]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0033365 "protein localization to
organelle" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005813 "centrosome" evidence=IDA] GO:GO:0009792
GO:GO:0035046 GO:GO:0005737 GO:GO:0040010 GO:GO:0005813
GO:GO:0007052 GO:GO:0016246 GO:GO:0000910 GO:GO:0033365
GeneTree:ENSGT00700000104127 GO:GO:0007020 EMBL:FO080752 PIR:T29145
RefSeq:NP_491539.1 ProteinModelPortal:P91349 DIP:DIP-24727N
IntAct:P91349 MINT:MINT-1053573 STRING:P91349 PaxDb:P91349
EnsemblMetazoa:F56A3.4 GeneID:172155 KEGG:cel:CELE_F56A3.4
UCSC:F56A3.4 CTD:172155 WormBase:F56A3.4 eggNOG:NOG310608
InParanoid:P91349 OMA:MSQIREA NextBio:874249 Uniprot:P91349
Length = 1198
Score = 100 (40.3 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 50/193 (25%), Positives = 91/193 (47%)
Query: 22 VETDLKALEPELRKAVN-FLELENCVQRKHNEIYQYERYVNMKNLGEH--ETKVQQ---M 75
++T + L EL+ + E + Q++ E+ + YV++K LG+ + K++Q M
Sbjct: 72 LKTKITILRGELQMYQRRYSEAKEASQKRVKEVM--DDYVDLK-LGQENVQEKMEQYKLM 128
Query: 76 EQELTANLESIKKCTD----EMESAKSELKTVEKKGKESNVIGSKFR-WSVFSAKTRFEC 130
E++L A I+ D +M+ +++ +E++ KE + + +V S + +
Sbjct: 129 EEDLLAMQSRIETSEDNFARQMKEFEAQKHAMEERIKELELSATDANNTTVGSFRGTLD- 187
Query: 131 DIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESR 190
DI K F T E +K+ DLEA L L+E + E L + + E+ +
Sbjct: 188 DILKKNDPDFTLTSGYEERKINDLEAKL------LSEIDKVAE-LEDHIQQLRQELDDQS 240
Query: 191 ARLADLTREEAKL 203
ARLAD A+L
Sbjct: 241 ARLADSENVRAQL 253
Score = 75 (31.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 22/73 (30%), Positives = 36/73 (49%)
Query: 456 NPIRGLMGRKATVSTDTS-LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELK 514
+P+ G GR + V +T+ + +DLEV E L + E L Q E+E L+ ++L
Sbjct: 726 SPLNGSSGRLSDVQINTNRMFEDLEVSEATLQKAKEENSTLKSQFAELEANLHQVNSKLG 785
Query: 515 YKKQEYDTCLIDV 527
+ E + L V
Sbjct: 786 EVRCELNEALARV 798
>UNIPROTKB|E1C610 [details] [associations]
symbol:E1C610 "Structural maintenance of chromosomes
protein" species:9031 "Gallus gallus" [GO:0000796 "condensin
complex" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006281 "DNA repair" evidence=IEA] [GO:0006310 "DNA
recombination" evidence=IEA] [GO:0007062 "sister chromatid
cohesion" evidence=IEA] [GO:0007076 "mitotic chromosome
condensation" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR024704 InterPro:IPR010935 InterPro:IPR027120
Pfam:PF06470 PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
SUPFAM:SSF75553 GeneTree:ENSGT00550000074857 PANTHER:PTHR18937:SF9
EMBL:AADN02057751 EMBL:AADN02057752 EMBL:AADN02057753
EMBL:AADN02057754 EMBL:AADN02057755 IPI:IPI00823281
Ensembl:ENSGALT00000037611 ArrayExpress:E1C610 Uniprot:E1C610
Length = 1173
Score = 117 (46.2 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 38/118 (32%), Positives = 60/118 (50%)
Query: 415 TLVAQDLNQAKRIGYSGGGYRM-VTLEGAIIEPSGTMSGGGSNPIRGLMGRKATV--STD 471
TLV ++ AK++ + R VTL+G I +P GT+SGG S+ + ++ + T+ + D
Sbjct: 627 TLVCSSMDNAKKVTFDKRIMRKTVTLQGDIFDPQGTLSGGASSHVTPILSKLKTMRDAED 686
Query: 472 TSLVK--DLEVKEKRLASLET---ELRILSQQ---KMEVETQLNCTGNELKYKKQEYD 521
+K LE EK LA+L+ + + L QQ K E L + Y KQ+ D
Sbjct: 687 ELKIKTSQLEATEKELANLKNMAEKYQHLKQQWEMKSEEAELLQTKIQQSAYHKQQED 744
Score = 58 (25.5 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 30/108 (27%), Positives = 54/108 (50%)
Query: 82 NLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELEIFL 141
N+ SIK +++ A+ ELKT K++ V K S + FE I K++ + L
Sbjct: 413 NISSIK-AQMKLKYAQQELKT-----KQAEV--KKMDGSYKEDQEAFEA-IRKTKEK--L 461
Query: 142 STQSKETK-KLADLEANLEK---VQTTLTERKTLCEELTTRVPAMESE 185
+ K+ K + A+ EA+L K + + ++ + LCE + + P + E
Sbjct: 462 QDEMKKLKYEEAEQEAHLAKKKQLSSEISSLRELCESIEAKHPYLRFE 509
Score = 42 (19.8 bits), Expect = 0.00039, Sum P(3) = 0.00039
Identities = 19/74 (25%), Positives = 34/74 (45%)
Query: 14 EKL--TRVQLVETDLKALEPE-LRK---AVNFLELENCVQRKHNEIY--QYERYVNMKNL 65
EKL R +E E E LR+ A ++ E R N + Q + +++
Sbjct: 209 EKLKEARASYLEYQKMTREVENLRRIYVAFQYVRAEEIKDRSTNALKEAQANKKKIFESM 268
Query: 66 GEHETKVQQMEQEL 79
E+E KV+++ Q++
Sbjct: 269 AENEKKVKELAQQI 282
>UNIPROTKB|E1C1F2 [details] [associations]
symbol:TRIP11 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] InterPro:IPR000237 PROSITE:PS50913
GO:GO:0005634 GO:GO:0005794 GeneTree:ENSGT00700000104188
GO:GO:0000042 OMA:LESEVDH EMBL:AADN02003653 IPI:IPI00580771
Ensembl:ENSGALT00000017502 Uniprot:E1C1F2
Length = 1980
Score = 112 (44.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 63/289 (21%), Positives = 127/289 (43%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE 69
+ + EKL++ DL + +L+ V L+ E + + ++ N K + E +
Sbjct: 560 DTQKEKLSQCSYALNDLHISKQQLQDNVRNLQ-EQLKKAQDCNLH------NKKEIRELQ 612
Query: 70 TKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFE 129
++++ E+EL+ S+ K T+ ++ S + + KES+V + + K + E
Sbjct: 613 QRLKEREEELSL---SLSKSTENIKQESSH-SSQDLILKESDVEIVELQ------KKQLE 662
Query: 130 CDIAKSELEIFLSTQSKETKKL-ADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAE 188
+LE LS E KL A E +++ T++E+ +C E T V A++ E
Sbjct: 663 NKQLNEDLEKSLSDLKTENGKLMAAFEELKQELNDTISEKNKVCLEKDTVVEALK---LE 719
Query: 189 SRARLADLTREEAKLLDQVEKLAREVSE--KRESMQTSR---SNNRLIDFVMQLKSENRV 243
R +L + E +L +Q +K + + E SM T+ + RL+ + + + ++
Sbjct: 720 KRHLETELNQTEKRLFEQAQKYEQTIEELSNARSMNTTALQLEHERLVK--LNQEKDFKI 777
Query: 244 SXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIAAVKRQ 292
+ Q+ ++T+ G + TE ++ E I +K Q
Sbjct: 778 AELKRSMEQMEVDHQETKEMLTTSLGGQKQL-TELLKEKEEFIEKLKNQ 825
Score = 67 (28.6 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 19/78 (24%), Positives = 38/78 (48%)
Query: 443 IIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLV-KDLEVKEKRLASLETELRILSQQKME 501
++ PS TM+ S P +S ++ L+ K+LE +K+L ++ +R L +
Sbjct: 1315 LVTPSATMASIISQPSVMQSSAPEVLSDESKLLQKELEQLKKKLQEKDSTIRTLQENNQR 1374
Query: 502 VETQLNCTGNELKYKKQE 519
+ + T +E + + QE
Sbjct: 1375 LSDSV-ATASEFERRSQE 1391
>MGI|MGI:1924066 [details] [associations]
symbol:Sdccag8 "serologically defined colon cancer antigen
8" species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=ISO;IDA] [GO:0005814 "centriole"
evidence=ISO] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005911
"cell-cell junction" evidence=ISO] [GO:0030010 "establishment of
cell polarity" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0035148 "tube formation" evidence=IMP]
MGI:MGI:1924066 GO:GO:0005814 GO:GO:0005911 GO:GO:0030010
GO:GO:0035148 GeneTree:ENSGT00660000095552 eggNOG:NOG69678
HOGENOM:HOG000133059 HOVERGEN:HBG056806 CTD:10806 KO:K16488
OMA:SQRQEET ChiTaRS:SDCCAG8 EMBL:AF250729 EMBL:AK132316
EMBL:AK133622 IPI:IPI00283842 RefSeq:NP_084032.1 UniGene:Mm.171399
ProteinModelPortal:Q80UF4 STRING:Q80UF4 PhosphoSite:Q80UF4
PRIDE:Q80UF4 Ensembl:ENSMUST00000027785 GeneID:76816 KEGG:mmu:76816
UCSC:uc007duj.1 InParanoid:Q80UF4 OrthoDB:EOG4J6RR5 NextBio:345883
Bgee:Q80UF4 CleanEx:MM_SDCCAG8 Genevestigator:Q80UF4
GermOnline:ENSMUSG00000026504 Uniprot:Q80UF4
Length = 717
Score = 123 (48.4 bits), Expect = 0.00039, P = 0.00039
Identities = 56/261 (21%), Positives = 121/261 (46%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELE-NCVQRKHNEIYQYERY 59
+E K E+T ++ ++ ++ + + E ++ K + + N + + +E+ + R
Sbjct: 422 LEAQVEKVTREKTAAVSHLEEIQNHVASQEMDVTKVCGEMRFQLNKTKMEKDEVEKEHRE 481
Query: 60 VNMKNLGEHETKVQQMEQ---ELTANLESIKKCTDEMESAKSE-LKTVEKKGKESNVIGS 115
K+ + E KVQ++E+ EL+ + + +++ + A+ E L+ E G+ +
Sbjct: 482 YKAKSHKDLEMKVQEIEKLRLELSESEQHVEQEQQKAARARQECLRVTELLGEAERQLHL 541
Query: 116 KFRWSVFSAKTRFECDIAKSELEIFLSTQSKE---TKKLADLEANLEKVQTT----LTER 168
R S + F + AK++ L Q +E T+K+ +E +K ++ LT +
Sbjct: 542 T-RLEKDSIQQSFSNE-AKAQA---LQAQQREQELTQKIQQMETQHDKTESEQYLLLTSQ 596
Query: 169 KT----LCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRES-MQT 223
T L EE +E +SR+++ L++E+ L D++EKL + E E +Q
Sbjct: 597 NTFLTKLKEECCLLAKKLEKVSLKSRSQIVRLSQEKRYLCDKLEKLQKRNDELEEQCIQH 656
Query: 224 SRSNNRLIDFVMQLKSENRVS 244
R + + + + QL + +
Sbjct: 657 GRVHETMKERLRQLDKHGQAT 677
>TAIR|locus:2161358 [details] [associations]
symbol:AT5G46070 species:3702 "Arabidopsis thaliana"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006955 "immune response" evidence=ISS] [GO:0009507
"chloroplast" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0000226 "microtubule cytoskeleton organization" evidence=RCA]
[GO:0000911 "cytokinesis by cell plate formation" evidence=RCA]
InterPro:IPR003191 InterPro:IPR015894 Pfam:PF02263 Pfam:PF02841
GO:GO:0005525 EMBL:CP002688 GO:GO:0009507 GO:GO:0005730
GO:GO:0003924 GO:GO:0006184 SUPFAM:SSF48340 IPI:IPI00528409
RefSeq:NP_199419.2 UniGene:At.29977 ProteinModelPortal:F4KG14
SMR:F4KG14 PRIDE:F4KG14 EnsemblPlants:AT5G46070.1 GeneID:834648
KEGG:ath:AT5G46070 OMA:CDEKGKF Uniprot:F4KG14
Length = 1082
Score = 125 (49.1 bits), Expect = 0.00040, P = 0.00040
Identities = 58/226 (25%), Positives = 99/226 (43%)
Query: 9 DEERTEKLTRVQLVETDLKALEPELRKAVNFLE---LENCVQRKH-NEIYQYERYVNMKN 64
DEE TEK T+++ E L L +L+ A + LE +E R +E+ N K
Sbjct: 697 DEEITEKATKLEKAEQSLTVLRSDLKVAESKLESFEVELASLRLTLSEMTDKLDSANKKA 756
Query: 65 LGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW-SVFS 123
L +E + ++EQE + + + K K E + K + + K R +V S
Sbjct: 757 LA-YEKEANKLEQEKIRMEQKYRSEFQRFDEVKERCKAAEIEAKRATELADKARTDAVTS 815
Query: 124 AKTRFECD-IAKSEL-EIFLSTQSKET--KKLADLEANLEKVQTTLTERKTLCEELTTRV 179
K + E +A L +I + + E ++ DLE L++++ + E + L RV
Sbjct: 816 QKEKSESQRLAMERLAQIERAERQVENLERQKTDLEDELDRLRVSEMEAVSKVTILEARV 875
Query: 180 PAMESEIA----ESRARLADLTREEAKLLDQVEKLAREVSEKRESM 221
E EI E+ A+ A + KLLD+ K + + E++
Sbjct: 876 EEREKEIGSLIKETNAQRAHNVKSLEKLLDEERKAHIAANRRAEAL 921
>UNIPROTKB|I3L5C1 [details] [associations]
symbol:SASS6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0007099 "centriole replication" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] GO:GO:0005814 GO:GO:0007099
CTD:163786 KO:K16487 GeneTree:ENSGT00390000006932
RefSeq:XP_003361047.1 Ensembl:ENSSSCT00000025457 GeneID:100622404
KEGG:ssc:100622404 OMA:HSISNTI Uniprot:I3L5C1
Length = 434
Score = 120 (47.3 bits), Expect = 0.00041, P = 0.00041
Identities = 47/225 (20%), Positives = 105/225 (46%)
Query: 19 VQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQE 78
++ ++T L +E EL++A + E R+ N E + K++ + +TKV +EQE
Sbjct: 52 IRELKTKLSGVEEELQRA----KQEVLSLRRENSTLDAECHEKEKHINQLQTKVAVLEQE 107
Query: 79 LTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELE 138
+ + + + + ++ + + +E+ G+++ V K ++ S ++ K+ E
Sbjct: 108 IKDKDQLVLRTKEAFDTIQEQKVALEENGEKNQVQLGKLEATIKS----LSAELLKAN-E 162
Query: 139 IFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLTR 198
I Q L L L+ T +++ L E ++ + E+ + L +
Sbjct: 163 IIKKLQGD----LKTLMGKLKLKNTVTIQQEKLLAEKEEKLQKEQKELQDVGHTLRIKEQ 218
Query: 199 EEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E KL +Q+E +++ E S Q ++N +LI ++ + +EN++
Sbjct: 219 EVCKLQEQLEATVQKLEE---SKQLLKNNEKLITWLNKELNENQL 260
>ZFIN|ZDB-GENE-070705-74 [details] [associations]
symbol:myhz1.3 "myosin, heavy polypeptide 1.3,
skeletal muscle" species:7955 "Danio rerio" [GO:0016459 "myosin
complex" evidence=IEA] [GO:0003774 "motor activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-070705-74 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
HOVERGEN:HBG004704 InterPro:IPR015650 PANTHER:PTHR13140:SF22
GeneTree:ENSGT00680000099788 EMBL:BX510649 UniGene:Dr.121240
IPI:IPI00858466 RefSeq:XP_001924014.2 UniGene:Dr.75130
STRING:B8A569 Ensembl:ENSDART00000122889 GeneID:100008070
KEGG:dre:100008070 CTD:100008070 OMA:ANIQHET NextBio:20787735
Uniprot:B8A569
Length = 1937
Score = 127 (49.8 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 50/247 (20%), Positives = 112/247 (45%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ A + + K + L+ Q+ +++ E
Sbjct: 959 LELTLAKVEKEKHATENKVKNLTEEMAAQDESIGKLTKEKKALQEAHQQTLDDLQAEEDK 1018
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1019 VN--TLTKSKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLENDKQ 1076
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE S++E S ++ KK+ +L+A +E+++ + + ++
Sbjct: 1077 QSEEKLKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEK 1136
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ + E+ E RL + A ++ +K E + R ++ S + ++
Sbjct: 1137 QRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRK 1196
Query: 238 KSENRVS 244
K + V+
Sbjct: 1197 KQADSVA 1203
Score = 51 (23.0 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 22/108 (20%), Positives = 48/108 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGG---GSNPIRGLMGRKATVSTDTSLVKD 477
L++A+ + GG ++ LE + E + G++ ++G+ + V T ++
Sbjct: 1799 LDEAENLAMKGGKKQLQKLESRVRELETEIEAEQRRGADAVKGVRKYERRVKELTYQTEE 1858
Query: 478 LEVKEKRLASLETELRI----LSQQKMEVETQLNCTGNELKYKKQEYD 521
+ RL L +L++ +Q E E Q N ++L+ + E +
Sbjct: 1859 DKKNVNRLQDLVDKLQLKVKAYKRQSEEAEEQANSHLSKLRKVQHELE 1906
Score = 50 (22.7 bits), Expect = 0.00052, Sum P(2) = 0.00052
Identities = 19/73 (26%), Positives = 36/73 (49%)
Query: 454 GSNPIRGLMGRKATVSTDTSLVKD-LEVKEKRLASLETELRILSQQKMEVETQLNCTG-- 510
G + G ++ST+ +K+ E +L +L+ E + L Q+ ++ QL TG
Sbjct: 1465 GQAELEGAQKEARSLSTELFKMKNSYEETLDQLETLKRENKNLQQEISDLTEQLGETGKS 1524
Query: 511 -NELKYKKQEYDT 522
+EL+ K+ +T
Sbjct: 1525 IHELEKSKKAVET 1537
>TAIR|locus:2038446 [details] [associations]
symbol:AT1G63300 "AT1G63300" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] EMBL:CP002684
GenomeReviews:CT485782_GR EMBL:AC022355 InterPro:IPR019448
Pfam:PF10358 IPI:IPI00534856 PIR:H96658 RefSeq:NP_176519.1
UniGene:At.36149 ProteinModelPortal:Q9C8T4 PRIDE:Q9C8T4
EnsemblPlants:AT1G63300.1 GeneID:842636 KEGG:ath:AT1G63300
TAIR:At1g63300 eggNOG:NOG260071 HOGENOM:HOG000084896
InParanoid:Q9C8T4 OMA:QIKLKET PhylomeDB:Q9C8T4
ProtClustDB:CLSN2715265 Genevestigator:Q9C8T4 Uniprot:Q9C8T4
Length = 1029
Score = 129 (50.5 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 54/217 (24%), Positives = 105/217 (48%)
Query: 15 KLTRVQLVETDLKALEPELR--KAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKV 72
++ + QL E +K ELR +A +L ++ + Q ER ++NL E ++
Sbjct: 656 RMQKRQLEEM-IKDANDELRANQAEYEAKLHELSEKLSFKTSQMERM--LENLDEKSNEI 712
Query: 73 QQM---EQELTANL-ESIKKCTDEMESAKSELKTVEKKGKESNVIG---SKFRWSVFSAK 125
E+++TANL + IK +E+E+ K ++ + +++ + K + SV A+
Sbjct: 713 DNQKRHEEDVTANLNQEIKILKEEIENLKKNQDSLMLQAEQAENLRVDLEKTKKSVMEAE 772
Query: 126 TRFECD-IAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMES 184
+ + + K ELE +S KE++ LA A L+ ++ E++T L T + + S
Sbjct: 773 ASLQRENMKKIELESKISLMRKESESLA---AELQVIKLAKDEKETAISLLQTELETVRS 829
Query: 185 EIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM 221
+ + + L++ E K QV + E+ +K E+M
Sbjct: 830 QCDDLKHSLSENDLEMEKHKKQVAHVKSELKKKEETM 866
Score = 43 (20.2 bits), Expect = 0.00041, Sum P(2) = 0.00041
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 469 STDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNE 512
S++ + K+ +K R+ LET+L SQ+ E E LN NE
Sbjct: 928 SSNMFIEKEKNLKN-RIEELETKLDQNSQEMSENEL-LNGQENE 969
>ZFIN|ZDB-GENE-040910-6 [details] [associations]
symbol:sycp1 "synaptonemal complex protein 1"
species:7955 "Danio rerio" [GO:0000795 "synaptonemal complex"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] InterPro:IPR008827 Pfam:PF05483
ZFIN:ZDB-GENE-040910-6 GO:GO:0007130 GO:GO:0000795 CTD:6847
PANTHER:PTHR18878 GeneTree:ENSGT00390000003368 OMA:KITEMVA
EMBL:BX005150 IPI:IPI00487271 RefSeq:NP_001112366.1
UniGene:Dr.107962 Ensembl:ENSDART00000011876 GeneID:402797
KEGG:dre:402797 NextBio:20816630 ArrayExpress:F1QYS1 Bgee:F1QYS1
Uniprot:F1QYS1
Length = 1000
Score = 119 (46.9 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 46/219 (21%), Positives = 105/219 (47%)
Query: 9 DEERTEKLTRVQLVETDLKA-LEPELR-KAVNFLELENCVQRKHNEIYQYERYVNMKNLG 66
D++ KL DLK LE E K + +Q+K N+ + V++K L
Sbjct: 222 DQQDMLKLRECLAQFEDLKVQLESECHFKEEQVAIFQEKLQKKENDF----KDVSLK-LQ 276
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEK-KGK-ESN--VIGSKFRWSVF 122
E + +E+ + E + T + E+ + +L +++ K + E N V+ K ++
Sbjct: 277 ETQHICSVLEESSRKHQELLHSATQDREALEEKLNVIQQLKWELEENQRVLTYKLEQTME 336
Query: 123 SAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
+ + F+ +E+E + + + T +LAD++ + +Q++LT ++L T++ ++
Sbjct: 337 NHEKLFQKK--DTEIEDLNNIKEQRTNQLADMQLTVNSLQSSLTSEIQRAQDLETKLSSV 394
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM 221
++++E A + + +Q++ L +++ EK S+
Sbjct: 395 MNDLSEKNAEIEVTKSQNVDHCEQLQILRKDLDEKSNSL 433
Score = 53 (23.7 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 16/56 (28%), Positives = 27/56 (48%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKS 529
L KDL+ K L S++ EL+ Q +++ T L +E + K + + KS
Sbjct: 422 LRKDLDEKSNSLWSIKEELKANETQILKLITSLEEKQSEANHLKDTVENITTENKS 477
>UNIPROTKB|E1C4K5 [details] [associations]
symbol:SCLT1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0045111 "intermediate filament
cytoskeleton" evidence=IEA] GO:GO:0005737 GO:GO:0005813
GO:GO:0045111 GeneTree:ENSGT00660000095552 EMBL:AADN02016167
EMBL:AADN02016168 IPI:IPI00578126 Ensembl:ENSGALT00000016446
OMA:ECADKES Uniprot:E1C4K5
Length = 635
Score = 122 (48.0 bits), Expect = 0.00043, P = 0.00043
Identities = 54/233 (23%), Positives = 101/233 (43%)
Query: 1 MEVLYGKYDEERTEKLT---RVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYE 57
+E L+ KY T K +Q + LK LE + + + C I E
Sbjct: 393 LEQLHQKYLLAETTKCDLQLSLQTTQHKLKLLEMNFEEEKSNYQKNIC---NLQSILDSE 449
Query: 58 RYVNMKNLGEHETKVQQMEQELTANLESIKK-CTDEMESAKSELKTVEKKG--KESNVIG 114
R + ++GE K+QQ ++L +ES++K T+ + AK ++ T+E + KE
Sbjct: 450 REKS-GSIGEQRLKLQQENEQLQKEIESLRKLATEAQQKAKIKISTMEHEHAVKEHGYEV 508
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADL-EANLEKVQTTLTERKTLCE 173
S K+ E + + +ETK L + EA + K+++ L++ K +
Sbjct: 509 RLKEMEDMSQKSTAELRHLLVAQQKATNRWKEETKVLTETTEARINKLKSDLSQHKLRNQ 568
Query: 174 ELTTRVPAMESEIAESRARLADLTREEAKL---LDQVEKLAREVSEKRESMQT 223
EL ++ +++ E + + + +L L Q E+ A S+K ++ T
Sbjct: 569 ELIAQLEMANNKVIEDEKLMTEYQKHINRLQMRLSQAEQRAATASQKLSTLTT 621
>WB|WBGene00001829 [details] [associations]
symbol:hcp-1 species:6239 "Caenorhabditis elegans"
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000070 "mitotic sister chromatid segregation"
evidence=IMP] [GO:0051382 "kinetochore assembly" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0031134
"sister chromatid biorientation" evidence=IMP] [GO:0000777
"condensed chromosome kinetochore" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005819 "spindle" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] GO:GO:0005634
GO:GO:0009792 GO:GO:0007052 GO:GO:0005819 eggNOG:NOG12793
GeneTree:ENSGT00700000104127 GO:GO:0031134 GO:GO:0051382
GO:GO:0000777 EMBL:FO081055 PIR:T33318 RefSeq:NP_504677.1
ProteinModelPortal:O76447 DIP:DIP-24595N IntAct:O76447
MINT:MINT-116395 STRING:O76447 PaxDb:O76447 EnsemblMetazoa:ZK1055.1
GeneID:179049 KEGG:cel:CELE_ZK1055.1 UCSC:ZK1055.1 CTD:179049
WormBase:ZK1055.1 InParanoid:O76447 OMA:SEHEESI NextBio:903682
Uniprot:O76447
Length = 1475
Score = 134 (52.2 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 58/243 (23%), Positives = 116/243 (47%)
Query: 2 EVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVN 61
E L + D EK LV T L+ EL A+ EN VQ K I + V+
Sbjct: 982 EALRAELDAAVQEKGRSSDLV-TSLEGKIQELETAIESSTAEN-VQ-KSKTIQDFTDKVS 1038
Query: 62 M--KNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
+ + E +++ +QME + N++ + + + ++ESA +EL +E + I K R
Sbjct: 1039 LLESQICELKSQNEQMEIDTNLNMDQLSEMSSQLESANAEL--IELTRTSAETI-DKLRG 1095
Query: 120 SVF-SAKTRFECD------IAKSEL-EIFLSTQS----KETKKLADLEANLEKVQTTLTE 167
V S K + + +AK E ++ + Q+ +E ++L + L Q+T+ E
Sbjct: 1096 EVEKSTKAMMDQEEHLAELVAKIESRDVENADQAAKHKEEQERLQSVIDTLRTSQSTIEE 1155
Query: 168 RKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSN 227
+ EEL +R+ +++ I ++ LAD + + ++++EK+ ++ ++ + +++
Sbjct: 1156 SQAKSEELNSRIKELQASIEFAQKALADTENAKQEKVEELEKVQEQMLNLVQAFEVEKAS 1215
Query: 228 NRL 230
RL
Sbjct: 1216 IRL 1218
Score = 41 (19.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 8/21 (38%), Positives = 13/21 (61%)
Query: 478 LEVKEKRLASLETELRILSQQ 498
L KE + +LE+ + +SQQ
Sbjct: 1238 LSQKENTIVTLESRIETISQQ 1258
>UNIPROTKB|P13533 [details] [associations]
symbol:MYH6 "Myosin-6" species:9606 "Homo sapiens"
[GO:0003779 "actin binding" evidence=IEA] [GO:0005516 "calmodulin
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0032982 "myosin filament" evidence=IEA] [GO:0001725 "stress
fiber" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA] [GO:0030509
"BMP signaling pathway" evidence=IEA] [GO:0060070 "canonical Wnt
receptor signaling pathway" evidence=IEA] [GO:0060420 "regulation
of heart growth" evidence=IEA] [GO:0005859 "muscle myosin complex"
evidence=TAS] [GO:0019901 "protein kinase binding" evidence=IPI]
[GO:0007512 "adult heart development" evidence=IMP] [GO:0055009
"atrial cardiac muscle tissue morphogenesis" evidence=IMP]
[GO:0055010 "ventricular cardiac muscle tissue morphogenesis"
evidence=IMP] [GO:0030017 "sarcomere" evidence=TAS] [GO:0030049
"muscle filament sliding" evidence=IMP;TAS] [GO:0030898
"actin-dependent ATPase activity" evidence=IMP] [GO:0002027
"regulation of heart rate" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0008307 "structural constituent of
muscle" evidence=IDA] [GO:0016459 "myosin complex" evidence=TAS]
[GO:0006936 "muscle contraction" evidence=IDA] [GO:0005829
"cytosol" evidence=TAS] [GO:0048739 "cardiac muscle fiber
development" evidence=ISS] [GO:0000146 "microfilament motor
activity" evidence=ISS] [GO:0001701 "in utero embryonic
development" evidence=ISS] [GO:0002026 "regulation of the force of
heart contraction" evidence=ISS] [GO:0006941 "striated muscle
contraction" evidence=ISS] [GO:0007522 "visceral muscle
development" evidence=ISS] [GO:0008016 "regulation of heart
contraction" evidence=ISS] [GO:0008217 "regulation of blood
pressure" evidence=ISS] [GO:0030016 "myofibril" evidence=ISS]
[GO:0030239 "myofibril assembly" evidence=ISS] [GO:0043462
"regulation of ATPase activity" evidence=ISS] [GO:0045214
"sarcomere organization" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005829 GO:GO:0005524 GO:GO:0048471 GO:GO:0030018
GO:GO:0005730 GO:GO:0030017 GO:GO:0001701 Orphanet:155
GO:GO:0005925 Orphanet:154 GO:GO:0008217 EMBL:CH471078
GO:GO:0000146 GO:GO:0001725 Reactome:REACT_17044 Orphanet:99103
GO:GO:0030049 GO:GO:0045214 GO:GO:0043462 GO:GO:0008307
GO:GO:0030509 GO:GO:0007512 GO:GO:0002026 GO:GO:0006941
GO:GO:0002027 GO:GO:0060070 GO:GO:0030899 eggNOG:COG5022
EMBL:AL049829 GO:GO:0007522 GO:GO:0055009 GO:GO:0055010
GO:GO:0048739 GO:GO:0060420 Orphanet:166282 GO:GO:0005859
GO:GO:0030898 GO:GO:0032982 HOVERGEN:HBG004704 KO:K10352
HOGENOM:HOG000173959 HPA:HPA001349 HPA:HPA001239 EMBL:D00943
EMBL:Z20656 EMBL:BC132667 EMBL:M25140 EMBL:M25162 EMBL:M25142
EMBL:M25141 EMBL:X05632 EMBL:M21664 IPI:IPI00514201 PIR:A46762
RefSeq:NP_002462.2 UniGene:Hs.278432 ProteinModelPortal:P13533
SMR:P13533 STRING:P13533 PhosphoSite:P13533 DMDM:215274256
UCD-2DPAGE:P13533 PaxDb:P13533 PRIDE:P13533 Ensembl:ENST00000356287
Ensembl:ENST00000405093 GeneID:4624 KEGG:hsa:4624 UCSC:uc001wjv.3
CTD:4624 GeneCards:GC14M023851 HGNC:HGNC:7576 MIM:160710 MIM:613251
MIM:613252 MIM:614089 MIM:614090 neXtProt:NX_P13533
PharmGKB:PA31373 InParanoid:P13533 OMA:ISQQNSK OrthoDB:EOG42JNQH
ChiTaRS:MYH6 GenomeRNAi:4624 NextBio:17798 ArrayExpress:P13533
Bgee:P13533 CleanEx:HS_MYH6 Genevestigator:P13533
GermOnline:ENSG00000197616 Uniprot:P13533
Length = 1939
Score = 115 (45.5 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 50/227 (22%), Positives = 109/227 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 959 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQVEEDK 1018
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN +L + + K++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1019 VN--SLSKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIM------- 1069
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + E + K E +I +++ K+ D + ++Q L E + EEL +
Sbjct: 1070 DLENDKLQLEEKLKKKEFDI-----NQQNSKIEDEQVLALQLQKKLKENQARIEELEEEL 1124
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAR------EVSEKRES 220
A + A+ +DL+RE ++ +++E+ E+++KRE+
Sbjct: 1125 EAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 1171
Score = 63 (27.2 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 20/106 (18%), Positives = 45/106 (42%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E G + + G + + L E
Sbjct: 1799 LDEAEQIALKGGKKQLQKLEARVRELEGELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1858
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1859 DKKNLLRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1904
>CGD|CAL0001080 [details] [associations]
symbol:SMC1 species:5476 "Candida albicans" [GO:0034990
"nuclear mitotic cohesin complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0007064 "mitotic
sister chromatid cohesion" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0003680 "AT DNA
binding" evidence=IEA] [GO:0000217 "DNA secondary structure
binding" evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=IEA] InterPro:IPR024704 InterPro:IPR010935 Pfam:PF06470
PIRSF:PIRSF005719 SMART:SM00968 InterPro:IPR003395 CGD:CAL0001080
Pfam:PF02463 GO:GO:0005524 GO:GO:0005634 GO:GO:0005694
GO:GO:0006281 GO:GO:0006310 GO:GO:0030261 GO:GO:0007062
EMBL:AACQ01000091 EMBL:AACQ01000090 eggNOG:COG1196 SUPFAM:SSF75553
KO:K06636 RefSeq:XP_715092.1 RefSeq:XP_715143.1
ProteinModelPortal:Q5A021 SMR:Q5A021 STRING:Q5A021 GeneID:3643221
GeneID:3643229 KEGG:cal:CaO19.11845 KEGG:cal:CaO19.4367
Uniprot:Q5A021
Length = 1240
Score = 136 (52.9 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 80/395 (20%), Positives = 170/395 (43%)
Query: 3 VLYGKYDEERTEKLT-RVQLVETDL---KALEPELRKAVNFLELENCVQRKHNEIYQYER 58
VL K +++TE ++ + +L +A + L +NF +L+ V +I + +
Sbjct: 287 VLNAKKQKQQTEAAQQKIDSTKRELIPVEANQRSLSNKINFHKLK--VGDLVKDIARQKT 344
Query: 59 YVNM--KNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKT--VEKKGKE----- 109
V+ + L + + + ++ A + S + E + EL++ + + G E
Sbjct: 345 QVSSVERQLRDAQRMFDDFQAKIAAAVASSTNISPEAQKEYEELRSKFLAENGSELEEQI 404
Query: 110 SNVIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERK 169
S ++ +K S+ SAK+ E +E I E+ DL++ L V + E
Sbjct: 405 SLLLNNKD--SLNSAKSNLENQKTNAEHRI----AELESIVATDLKSKLHDVSNEINE-- 456
Query: 170 TLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNR 229
+ ++ + +V A + I + + + +L D + KL S++RES + +
Sbjct: 457 -VLDKKSDKVEARNALIKQKDEFNHEELKLNTRLRDVLVKLDELASQQRESNKQKKLREN 515
Query: 230 LIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGA-LNYIVTETVEAGEAVIAA 288
+ + +L + + QKY+ A++T G + I+ E+ I
Sbjct: 516 VAT-LKRLFPQGAIKGLVYELVRPTQ--QKYESALATLLGPNFDSIIVESSAVAYKCIDI 572
Query: 289 VKRQNVGRVNVIPLDKMQ-QYHSQCYDKYRTPENVPRLIDLIQVQDEKIRLAFYFATRET 347
+K + G IPLD ++ + + + P +P +D+I+ QD+ + A + T
Sbjct: 573 LKERRAGVATFIPLDSIETDIINLSHLRSIHPSALPG-VDIIEYQDKSLEPAVNYIIGNT 631
Query: 348 LVAQDLNQAKRIGYSGG---GYRMVTLEGAIIEPS 379
+V ++ A+ + + ++VTL+G++I S
Sbjct: 632 VVVDTIDTARNLKWQSNTRFDNKIVTLQGSVIHKS 666
Score = 37 (18.1 bits), Expect = 0.00046, Sum P(2) = 0.00046
Identities = 13/63 (20%), Positives = 32/63 (50%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKK-QEYDTC 523
++ + T S+ DL+ + +++L E+ + + ++ +++ N L+ K Q +
Sbjct: 903 QSQLKTSKSIESDLDDSKSLVSTLVKEITQIEENLLKTDSE---RANVLRNCKIQNINLP 959
Query: 524 LID 526
LID
Sbjct: 960 LID 962
>UNIPROTKB|O75145 [details] [associations]
symbol:PPFIA3 "Liprin-alpha-3" species:9606 "Homo sapiens"
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0009986 "cell surface"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001660 InterPro:IPR011510 Pfam:PF07647 PROSITE:PS50105
SMART:SM00454 GO:GO:0005737 GO:GO:0009986 Gene3D:1.10.150.50
InterPro:IPR013761 InterPro:IPR021129 Pfam:PF00536 SUPFAM:SSF47769
EMBL:CH471177 GO:GO:0007269 GO:GO:0048172 eggNOG:NOG322697
HOGENOM:HOG000017513 HOVERGEN:HBG052330 EMBL:AB014554 EMBL:AK023850
EMBL:AK025972 EMBL:AK289757 EMBL:BC021255 EMBL:BC101518
EMBL:BC101520 EMBL:AF034800 IPI:IPI00398364 IPI:IPI00398365
RefSeq:NP_003651.1 UniGene:Hs.413748 ProteinModelPortal:O75145
SMR:O75145 IntAct:O75145 MINT:MINT-3001008 STRING:O75145
PhosphoSite:O75145 PaxDb:O75145 PRIDE:O75145
Ensembl:ENST00000334186 GeneID:8541 KEGG:hsa:8541 UCSC:uc002pmr.3
UCSC:uc002pms.3 CTD:8541 GeneCards:GC19P049622 HGNC:HGNC:9247
MIM:603144 neXtProt:NX_O75145 PharmGKB:PA33568 InParanoid:O75145
OMA:WLEDAKQ OrthoDB:EOG4X6C7K PhylomeDB:O75145 ChiTaRS:PPFIA3
GenomeRNAi:8541 NextBio:31992 ArrayExpress:O75145 Bgee:O75145
CleanEx:HS_PPFIA3 Genevestigator:O75145 GermOnline:ENSG00000177380
Uniprot:O75145
Length = 1194
Score = 125 (49.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 54/211 (25%), Positives = 110/211 (52%)
Query: 41 ELENCVQRKHNEIYQY-ERY-VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKS 98
ELE ++R+ E+ Q ER V + + + E ++ +EL E+ K +++ A +
Sbjct: 237 ELEEALERQRAEVCQLRERLAVLCRQMSQLEEELGTAHRELGKAEEANSKLQRDLKEALA 296
Query: 99 ELKTVEKK--GKESNVIGSKFR-WSVFSAKTRFECDIAKSELEIFLSTQSKETKKLAD-L 154
+ + +E++ E + ++ S+ A + E ++A E ++ ++ K +++LA+ L
Sbjct: 297 QREDMEERITTLEKRYLSAQREATSLHDANDKLENELASKE-SLYRQSEEK-SRQLAEWL 354
Query: 155 EANLEKVQTTLTERKTLCE---ELTTRVPAMESEIAESRARLADLTRE-EAKLLDQVEKL 210
+ +K+Q TL + +TL E +L RV A+ ++ E + R+ EA+L ++ ++L
Sbjct: 355 DDAKQKLQQTLQKAETLPEIEAQLAQRVAAL-NKAEERHGNFEERLRQLEAQLEEKNQEL 413
Query: 211 AREVSEKRESMQTSRSNNRLIDFVMQLKSEN 241
R + +RE M N RL + V +L SE+
Sbjct: 414 QR--ARQREKMNDDH-NKRLSETVDKLLSES 441
Score = 48 (22.0 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 15/79 (18%), Positives = 40/79 (50%)
Query: 441 GAIIEP-SGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEVK-EKRLASLETELRILSQQ 498
G+I P G + G G+ G + + + V+ L + +++L ++ E++++ ++
Sbjct: 564 GSIPPPFPGELDGSDEEEAEGMFGAELLSPSGQADVQTLAIMLQEQLEAINKEIKLIQEE 623
Query: 499 KM-------EVETQLNCTG 510
K E+E++++ +G
Sbjct: 624 KETTEQRAEELESRVSSSG 642
>MGI|MGI:2685018 [details] [associations]
symbol:Ccdc110 "coiled-coil domain containing 110"
species:10090 "Mus musculus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2685018 GO:GO:0005886
GO:GO:0005794 GO:GO:0005730 CTD:256309 eggNOG:NOG128630
HOGENOM:HOG000057285 HOVERGEN:HBG081026 OrthoDB:EOG48WC1C
EMBL:AK132742 EMBL:AK161248 IPI:IPI00129608 RefSeq:NP_001028418.1
UniGene:Mm.296649 ProteinModelPortal:Q3V125 IntAct:Q3V125
PhosphoSite:Q3V125 PRIDE:Q3V125 Ensembl:ENSMUST00000095326
GeneID:212392 KEGG:mmu:212392 UCSC:uc009lpm.1
GeneTree:ENSGT00700000104188 InParanoid:Q3V125 OMA:FENSISR
NextBio:373553 Bgee:Q3V125 CleanEx:MM_CCDC110 Genevestigator:Q3V125
GermOnline:ENSMUSG00000071104 Uniprot:Q3V125
Length = 848
Score = 123 (48.4 bits), Expect = 0.00049, P = 0.00049
Identities = 50/241 (20%), Positives = 113/241 (46%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAV---NFLELENCVQRKHNEIYQYERYVNMKNLG 66
EE++ +++ E + K EL+K V N L ++ + + N E+ ++ +
Sbjct: 496 EEKSALQSKLSKAEEENKDCLRELKKIVSTYNVLGGQHKMLEEKNSQLSLEKQQMLETID 555
Query: 67 EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKT 126
++K + + ++ + E+E+ K+ + V+ E ++ K + + K+
Sbjct: 556 HLKSKEHKSQSDMAVLQNENSRMNIEIEAMKTSMLLVQD---EREML-EKETYQLLKDKS 611
Query: 127 RFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL---CEELTTRVPAME 183
E D+ +S+LEI L + KE A+ E+ L + T E+ +L +E T+ +E
Sbjct: 612 TLESDLKESKLEI-LQLKEKERLIKAEQESLLHSLDTAKAEKLSLEATLQESTSTRQKLE 670
Query: 184 SEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESM-QTSRSNNRLIDFVMQLKSENR 242
++ + +A + E K L +++ E S + ++ + S+ L VM++K++N+
Sbjct: 671 RKLVDIQAYQS---AAEEKFLKEIKSAKSETSIYKNNLAEISKECEILSKMVMEIKADNQ 727
Query: 243 V 243
+
Sbjct: 728 I 728
>UNIPROTKB|O42184 [details] [associations]
symbol:CLIP1 "CAP-Gly domain-containing linker protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0001726
"ruffle" evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] [GO:0001578 "microtubule bundle formation"
evidence=IEA] [GO:0005813 "centrosome" evidence=IEA] [GO:0005881
"cytoplasmic microtubule" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0031116 "positive regulation of
microtubule polymerization" evidence=IEA] [GO:0035371 "microtubule
plus end" evidence=IEA] [GO:0044354 "macropinosome" evidence=IEA]
[GO:0051010 "microtubule plus-end binding" evidence=IEA]
InterPro:IPR000938 InterPro:IPR001878 PROSITE:PS50158 SMART:SM00343
Pfam:PF01302 GO:GO:0005813 GO:GO:0046872 GO:GO:0006810
GO:GO:0008270 GO:GO:0003676 GO:GO:0030659 GO:GO:0001726
GO:GO:0044354 GO:GO:0001578 eggNOG:COG5244 Gene3D:2.30.30.190
SMART:SM01052 SUPFAM:SSF74924 PROSITE:PS00845 PROSITE:PS50245
GO:GO:0005881 GO:GO:0035371 GO:GO:0031116
GeneTree:ENSGT00700000104055 EMBL:AF014012 EMBL:AF020764
EMBL:AF045650 EMBL:AF045651 IPI:IPI00572978 IPI:IPI00576988
IPI:IPI00582575 IPI:IPI00603875 RefSeq:NP_990273.1 UniGene:Gga.3130
ProteinModelPortal:O42184 SMR:O42184 STRING:O42184 PRIDE:O42184
Ensembl:ENSGALT00000007110 Ensembl:ENSGALT00000007113 GeneID:395784
KEGG:gga:395784 CTD:6249 HOGENOM:HOG000092755 HOVERGEN:HBG007123
InParanoid:O42184 KO:K10421 OMA:SRTEGEA OrthoDB:EOG42Z4PQ
NextBio:20815852 Uniprot:O42184
Length = 1433
Score = 114 (45.2 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 60/246 (24%), Positives = 117/246 (47%)
Query: 10 EERTEKLTRVQLVETDLKALEPELRKAVNFL-ELENCVQRKHNEIY----QYERYVNMKN 64
E+ +K + Q ET LK + EL+K + L +++ ++ N+ +YE+ + +
Sbjct: 964 EQTAQKAEQSQQ-ET-LKTHQEELKKMQDQLTDMKKQMETSQNQYKDLQAKYEKETS-EM 1020
Query: 65 LGEHETKVQQMEQELTANLESIK---KCTDEMESAKSELKTVEKKGKESNVIGSKFRWSV 121
+ +H+ ++ +Q L E++K K DE+E+ ELK ++ K +
Sbjct: 1021 ITKHDADIKGFKQNLLDAEEALKAAQKKNDELETQAEELKKQAEQAKADKRAEEVLQ--T 1078
Query: 122 FSAKTRFECDIAKSELEIFLSTQ-SKET-KKLAD----LEANLEKVQTTLTERKTLC--- 172
T+ + I + ++E S + S++T +KL + L+ N K + LT+ K L
Sbjct: 1079 MEKVTKEKDAIHQEKIETLASLENSRQTNEKLQNELDMLKQNNLKNEEELTKSKELLNLE 1138
Query: 173 ----EELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRS-- 226
EEL A++ A+ +LA L E KL +++ + EV+ + ++ RS
Sbjct: 1139 NKKVEELKKEFEALKLAAAQKSQQLAALQEENVKLAEELGRSRDEVTS-HQKLEEERSVL 1197
Query: 227 NNRLID 232
NN+L++
Sbjct: 1198 NNQLLE 1203
Score = 61 (26.5 bits), Expect = 0.00050, Sum P(2) = 0.00050
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 456 NPIRGLMGRKATVSTDTSLVKDLE---VK-EKRLASLETELRILSQQKMEV 502
N I L G A+ T S+VK LE +K E+++ +LE +L+ S+Q + V
Sbjct: 1245 NEITVLRGENASAKTLQSVVKTLESDKLKLEEKVKNLEQKLKAKSEQPLTV 1295
>UNIPROTKB|F1NZF5 [details] [associations]
symbol:Gga.27138 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003774 "motor activity" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
GO:GO:0005524 GO:GO:0003774 GO:GO:0016459 InterPro:IPR015650
PANTHER:PTHR13140:SF22 GeneTree:ENSGT00680000099790 OMA:NTQGMLK
EMBL:AADN02029739 EMBL:AADN02029740 IPI:IPI00821887 PRIDE:F1NZF5
Ensembl:ENSGALT00000040060 NextBio:20820627 Uniprot:F1NZF5
Length = 1940
Score = 131 (51.2 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 49/225 (21%), Positives = 104/225 (46%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ AL+ + K + L+ Q+ +++ E
Sbjct: 962 LELTLAKVEKEKHATENKVKNLTEEMAALDETIAKLTKEKKALQEAHQQTLDDLQAEEDK 1021
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1022 VN--TLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKMTQESTMDLENDKQ 1079
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE +S++E + + KK+ +L+A +E+++ + +T +
Sbjct: 1080 QLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERTSRAKAEK 1139
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ 222
+ E+ E RL + A +D +K E + R ++
Sbjct: 1140 HRADLSRELEEISERLEEAGGATAAQIDMNKKREAEFQKMRRDLE 1184
Score = 46 (21.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 20/106 (18%), Positives = 44/106 (41%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A+++ GG ++ LE + E G + + G + L E
Sbjct: 1802 LDEAEQLALKGGKKQIQKLEARVRELEGEVDAEQKRSAEAVKGVRKYERRVKELTYQSEE 1861
Query: 481 KEK---RLASL--ETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K RL L + ++++ S ++ E + N K++K +++
Sbjct: 1862 DRKNVLRLQDLVDKLQMKVKSYKRQAEEAEELSNVNLSKFRKIQHE 1907
>UNIPROTKB|P02565 [details] [associations]
symbol:MYH3 "Myosin-3" species:9031 "Gallus gallus"
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0032982
"myosin filament" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR002928 InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576
Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015
SMART:SM00242 GO:GO:0005524 GO:GO:0030016 GO:GO:0003774
eggNOG:COG5022 GO:GO:0032982 HOVERGEN:HBG004704 InterPro:IPR015650
PANTHER:PTHR13140:SF22 HOGENOM:HOG000173959 OrthoDB:EOG43N7BR
EMBL:V00430 EMBL:J02714 IPI:IPI00813503 PIR:A29320
UniGene:Gga.27138 UniGene:Gga.40396 UniGene:Gga.50494
ProteinModelPortal:P02565 SMR:P02565 STRING:P02565 PRIDE:P02565
InParanoid:P02565 Uniprot:P02565
Length = 1940
Score = 131 (51.2 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 49/225 (21%), Positives = 104/225 (46%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ AL+ + K + L+ Q+ +++ E
Sbjct: 962 LELTLAKVEKEKHATENKVKNLTEEMAALDETIAKLTKEKKALQEAHQQTLDDLQAEEDK 1021
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1022 VN--TLTKAKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKMTQESTMDLENDKQ 1079
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE +S++E + + KK+ +L+A +E+++ + +T +
Sbjct: 1080 QLDEKLKKKDFEISQIQSKIEDEQALGMQLQKKIKELQARIEELEEEIEAERTSRAKAEK 1139
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ 222
+ E+ E RL + A +D +K E + R ++
Sbjct: 1140 HRADLSRELEEISERLEEAGGATAAQIDMNKKREAEFQKMRRDLE 1184
Score = 46 (21.3 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 20/106 (18%), Positives = 44/106 (41%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A+++ GG ++ LE + E G + + G + L E
Sbjct: 1802 LDEAEQLALKGGKKQIQKLEARVRELEGEVDAEQKRSAEAVKGVRKYERRVKELTYQSEE 1861
Query: 481 KEK---RLASL--ETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
K RL L + ++++ S ++ E + N K++K +++
Sbjct: 1862 DRKNVLRLQDLVDKLQMKVKSYKRQAEEAEELSNVNLSKFRKIQHE 1907
>UNIPROTKB|F1NI68 [details] [associations]
symbol:GOLGA4 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000042 "protein targeting to Golgi"
evidence=IEA] InterPro:IPR000237 Pfam:PF01465 PROSITE:PS50913
SMART:SM00755 GeneTree:ENSGT00700000104373 GO:GO:0000042
Gene3D:1.10.220.60 SUPFAM:SSF101283 EMBL:AADN02001385
EMBL:AADN02001386 IPI:IPI00818295 Ensembl:ENSGALT00000020019
ArrayExpress:F1NI68 Uniprot:F1NI68
Length = 2142
Score = 128 (50.1 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 53/238 (22%), Positives = 117/238 (49%)
Query: 2 EVLYGKYDEERTEK-LTRVQLVETDLKALEPELRKAVNF---LELE-NCVQRKHNEIYQ- 55
E ++ + EE EK L ++ + +T+L+ L EL +A+ LE E + ++ K E Q
Sbjct: 608 ETVFRTHIEEMNEKTLEKLDVKQTELETLSSELSEALKVRQDLEQELSELKSKVGEAKQE 667
Query: 56 YERYVNMKNLGEHETKVQQMEQELTANLESIKKCT-DEMESAKSELKTVEKKGKESNVIG 114
+E + + +H+ +V+ M +E +++ ++K +E+ K L+ E+ +E+
Sbjct: 668 FEGKLEAER-NQHKEEVEIMLKEHEISIQDVEKVLKEELNQTKQSLEEKERLLEEAKTRE 726
Query: 115 SKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEE 174
+ + S ++ ++ +E LS Q+ ++ E L K+Q L + K +
Sbjct: 727 QELKESAQRSEAEL-VQVSARLMEASLSQQNTSNEQAKQYEEELAKLQQKLMDLKGEKLQ 785
Query: 175 LTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLID 232
L+ ++ ES++ E + L + +L Q+++ + E ++K S+ T + ++L D
Sbjct: 786 LSEQLVRTESQLNEVKNELELYISQVHELKQQLQEQSDENTQKVMSL-TQQYESQLKD 842
Score = 128 (50.1 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 74/352 (21%), Positives = 155/352 (44%)
Query: 7 KYDEERTEKLTRVQLVETDLKALEPELRKA-VNFLELENCVQRKHNEIYQYERYVN-MKN 64
K E +T+ TR +K L+ +L + + + + E+ Q + ++ +K+
Sbjct: 1368 KLSEWKTKAQTRFTQNHEAIKDLQSKLEVSNTQATKKGEELDKLKEELAQQGKDLDSLKS 1427
Query: 65 -LGEHETKVQQMEQELTANL-----------ESIKKCTDEMESAKSELKTV-EKKGKESN 111
L E E ++++ E ELTA L E I + T E +S K ELK E+K E
Sbjct: 1428 VLEEKENRIEKQESELTAELKIQAARVAELEEHIAQKTSENDSLKEELKRYHEQKDMEQK 1487
Query: 112 VIGSKFRWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKT- 170
+ + + + K FE D E E + E + L+A E + + K+
Sbjct: 1488 EVARQLQQA---EKVAFEKDSRLKEAEEKVLNLENE---IGSLKAECEAKEREFDQMKSA 1541
Query: 171 LCEELTTRVPAMESEI-AESRARLADLTREEAKLLDQVEK-LAREVSEKRESMQTSRSNN 228
+ + + +E + AE+ +LADL ++ + + +++ L R++ EK + ++ R N
Sbjct: 1542 ILKSKEEELKELEERLNAENSCKLADLKKKAEQKIGSIKRELVRQMEEKEQQLKQDRENQ 1601
Query: 229 -RLIDFVMQLKSENRVSXXXXXXXXXXXXXQKYDIAVSTACGALNYIVTETVEAGEAVIA 287
R ++ +Q + E ++ + + + + V + E E VI
Sbjct: 1602 VRHLEQKVQ-EREAKIESLEEKMKSVRDSTE-LEREMLQKIESTKAAVEQ--EKNE-VIK 1656
Query: 288 AVKRQNVGRVNVIPLDKMQQYHSQCYDKYRTP--ENVPRLIDLIQVQDEKIR 337
+V++ + ++N + D +++ ++ KY + E + L++L Q+E ++
Sbjct: 1657 SVQQTHEEKINKLQKDLIEK--NKLLQKYESEQREGIDSLLELQSKQEELLK 1706
Score = 50 (22.7 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 14/49 (28%), Positives = 25/49 (51%)
Query: 461 LMGRKATVSTDTSLVKDLEVKEKRLASL---ETELRILSQQKMEVETQL 506
L +++ +ST + +L V+ + + SL E + +LS Q E QL
Sbjct: 1289 LQEKESEISTLNKTINELNVRLESMVSLTEKEAAISLLSTQHQEERLQL 1337
Score = 50 (22.7 bits), Expect = 0.00051, Sum P(2) = 0.00051
Identities = 32/120 (26%), Positives = 50/120 (41%)
Query: 410 IEPSETLVAQDLNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVS 469
IE ++ V Q+ N+ + ++ L+ +IE + + S G+ S
Sbjct: 1640 IESTKAAVEQEKNEVIKSVQQTHEEKINKLQKDLIEKNKLLQKYESEQREGIDSLLELQS 1699
Query: 470 TDTSLVKDLEVKEKRLASLE--TE-LRI-LSQQKME----VETQLNCTGNELKYKKQEYD 521
L+K LE EKR + TE LR L +Q + V+ C G+ K K QE D
Sbjct: 1700 KQEELLKKLECAEKRHREEQSVTEGLREELEEQAKKYSLLVDEHARCVGDFQK-KMQEKD 1758
Score = 48 (22.0 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 11/45 (24%), Positives = 27/45 (60%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNE 512
++ TSL +DL+ KE +++L + +++ + +E+ ++ T E
Sbjct: 1279 INAVTSLREDLQEKESEISTLN---KTINELNVRLESMVSLTEKE 1320
Score = 48 (22.0 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 476 KDLEVKEKR-LASLETELRI-LSQQKMEVETQLNCTGNELKYKKQEYDTCLID 526
+D+E+K L L E L+Q++ME+ET + E K QE ++ LI+
Sbjct: 1898 EDIELKHSSTLKQLMREFNTQLAQKEMELETAVK----ETISKAQEVESELIE 1946
Score = 48 (22.0 bits), Expect = 0.00081, Sum P(2) = 0.00081
Identities = 22/78 (28%), Positives = 34/78 (43%)
Query: 439 LEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEVKEKRLASLETELRILSQQ 498
+EG + E GG + K T T L K+L + SL +L+ ++
Sbjct: 1240 IEGLVTEKEQLQKEGGHQ--KQAATEKETCITQ--LRKELSENINAVTSLREDLQ---EK 1292
Query: 499 KMEVETQLNCTGNELKYK 516
+ E+ T LN T NEL +
Sbjct: 1293 ESEIST-LNKTINELNVR 1309
>UNIPROTKB|P35579 [details] [associations]
symbol:MYH9 "Myosin-9" species:9606 "Homo sapiens"
[GO:0038032 "termination of G-protein coupled receptor signaling
pathway" evidence=IEA] [GO:0005516 "calmodulin binding"
evidence=IEA] [GO:0000212 "meiotic spindle organization"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0001768 "establishment of T cell polarity"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005913
"cell-cell adherens junction" evidence=IEA] [GO:0007132 "meiotic
metaphase I" evidence=IEA] [GO:0007520 "myoblast fusion"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=IEA]
[GO:0016460 "myosin II complex" evidence=IEA] [GO:0030863 "cortical
cytoskeleton" evidence=IEA] [GO:0031594 "neuromuscular junction"
evidence=IEA] [GO:0032796 "uropod organization" evidence=IEA]
[GO:0051295 "establishment of meiotic spindle localization"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0007229 "integrin-mediated signaling pathway" evidence=NAS]
[GO:0008305 "integrin complex" evidence=IDA] [GO:0051015 "actin
filament binding" evidence=NAS;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0001725
"stress fiber" evidence=IDA] [GO:0032154 "cleavage furrow"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0006509 "membrane protein ectodomain proteolysis" evidence=IDA]
[GO:0005826 "actomyosin contractile ring" evidence=IDA] [GO:0008360
"regulation of cell shape" evidence=IMP] [GO:0043234 "protein
complex" evidence=IDA] [GO:0031252 "cell leading edge"
evidence=IDA] [GO:0050900 "leukocyte migration" evidence=NAS]
[GO:0003774 "motor activity" evidence=NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0015031 "protein transport" evidence=IMP]
[GO:0043495 "protein anchor" evidence=IMP] [GO:0030220 "platelet
formation" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IDA] [GO:0000146 "microfilament motor activity"
evidence=IDA] [GO:0030224 "monocyte differentiation" evidence=IEP]
[GO:0015629 "actin cytoskeleton" evidence=IDA] [GO:0031532 "actin
cytoskeleton reorganization" evidence=IMP] [GO:0001525
"angiogenesis" evidence=IDA] [GO:0001726 "ruffle" evidence=IDA]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0043534 "blood vessel
endothelial cell migration" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0030048 "actin
filament-based movement" evidence=IDA] [GO:0008180 "signalosome"
evidence=IDA] [GO:0070062 "extracellular vesicular exosome"
evidence=IDA] [GO:0001772 "immunological synapse" evidence=IDA]
[GO:0001931 "uropod" evidence=IDA] [GO:0003779 "actin binding"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0030898
"actin-dependent ATPase activity" evidence=IDA] [GO:0043531 "ADP
binding" evidence=IDA] [GO:0007411 "axon guidance" evidence=TAS]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 InterPro:IPR016137 Pfam:PF00063 Pfam:PF00612
Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193 PROSITE:PS50096
SMART:SM00015 SMART:SM00242 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0043234 GO:GO:0042803 GO:GO:0005819 GO:GO:0008360
GO:GO:0030863 GO:GO:0015031 GO:GO:0050900 GO:GO:0070062
GO:GO:0001701 GO:GO:0031594 GO:GO:0051015 GO:GO:0043531
GO:GO:0001525 GO:GO:0005913 GO:GO:0000910 GO:GO:0031532
GO:GO:0000146 GO:GO:0001725 Orphanet:90635 GO:GO:0001726
GO:GO:0043495 GO:GO:0016337 GO:GO:0005826 GO:GO:0006509
GO:GO:0007229 GO:GO:0007520 GO:GO:0043534 GO:GO:0038032
SUPFAM:SSF48097 GO:GO:0032154 GO:GO:0030048 EMBL:Z82215
eggNOG:COG5022 GO:GO:0051295 GO:GO:0001772 GO:GO:0030224
GO:GO:0001768 GO:GO:0007132 GO:GO:0032796 GO:GO:0001931
GO:GO:0000212 GO:GO:0030220 GO:GO:0016460 GO:GO:0030898
HOGENOM:HOG000173958 HOVERGEN:HBG004704 KO:K10352 OrthoDB:EOG4TXBR1
CTD:4627 EMBL:CR456526 EMBL:AL832639 EMBL:M81105 EMBL:M69180
EMBL:M31013 IPI:IPI00019502 IPI:IPI00395772 PIR:A61231
RefSeq:NP_002464.1 UniGene:Hs.474751 PDB:2LNK PDB:3ZWH PDB:4ETO
PDBsum:2LNK PDBsum:3ZWH PDBsum:4ETO ProteinModelPortal:P35579
SMR:P35579 DIP:DIP-33103N IntAct:P35579 MINT:MINT-1147379
STRING:P35579 PhosphoSite:P35579 DMDM:6166599 PaxDb:P35579
PeptideAtlas:P35579 PRIDE:P35579 DNASU:4627 Ensembl:ENST00000216181
GeneID:4627 KEGG:hsa:4627 UCSC:uc003apg.3 GeneCards:GC22M036677
HGNC:HGNC:7579 HPA:CAB015386 HPA:HPA001644 MIM:153640 MIM:153650
MIM:155100 MIM:160775 MIM:600208 MIM:603622 MIM:605249
neXtProt:NX_P35579 Orphanet:1019 Orphanet:1984 Orphanet:850
Orphanet:807 PharmGKB:PA31377 InParanoid:P35579 OMA:EMRQKHS
PhylomeDB:P35579 ChiTaRS:MYH9 GenomeRNAi:4627 NextBio:17810
PMAP-CutDB:P35579 ArrayExpress:P35579 Bgee:P35579 CleanEx:HS_MYH9
Genevestigator:P35579 GermOnline:ENSG00000100345 Uniprot:P35579
Length = 1960
Score = 129 (50.5 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 49/222 (22%), Positives = 103/222 (46%)
Query: 12 RTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETK 71
+ EK R L E +L+AL+ EL ++ + ++ K + + + HE +
Sbjct: 1129 KAEKQKR-DLGE-ELEALKTELEDTLDSTAAQQELRSKREQEVNILKKTLEEEAKTHEAQ 1186
Query: 72 VQQMEQ-------ELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSA 124
+Q+M Q EL LE K+ +E AK L+ ++G+ +N + + S
Sbjct: 1187 IQEMRQKHSQAVEELAEQLEQTKRVKANLEKAKQTLEN--ERGELANEVKVLLQGKGDSE 1244
Query: 125 KTRFECDIAKSELEIFLSTQSKETKKLAD----LEANLEKVQTTLTERKTLCEELTTRVP 180
R + + EL++ + + +LAD L+ L+ V L++ + +LT
Sbjct: 1245 HKRKKVEAQLQELQVKFNEGERVRTELADKVTKLQVELDNVTGLLSQSDSKSSKLTKDFS 1304
Query: 181 AMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ 222
A+ES++ +++ L + R++ L +++++ E + RE ++
Sbjct: 1305 ALESQLQDTQELLQEENRQKLSLSTKLKQVEDEKNSFREQLE 1346
Score = 48 (22.0 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 483 KRLASLETELRILSQQKMEVETQLNCTGNELK 514
K + LE R L QQ E++TQL +EL+
Sbjct: 1518 KSVHELEKSKRALEQQVEEMKTQLEELEDELQ 1549
Score = 47 (21.6 bits), Expect = 0.00067, Sum P(2) = 0.00067
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 471 DTSLVKD-LEVKEKRLASLETEL---RILSQQKMEVETQLNCTGNELKYKKQEYD 521
+T L+ D L+ ++ + T+L R +Q+ QL ELK K QE +
Sbjct: 1744 NTELINDRLKKANLQIDQINTDLNLERSHAQKNENARQQLERQNKELKVKLQEME 1798
>ZFIN|ZDB-GENE-060531-50 [details] [associations]
symbol:myha "myosin, heavy chain a" species:7955
"Danio rerio" [GO:0016459 "myosin complex" evidence=IEA]
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003779 "actin binding" evidence=IEA]
InterPro:IPR000048 InterPro:IPR001609 InterPro:IPR002928
InterPro:IPR004009 Pfam:PF00063 Pfam:PF01576 Pfam:PF02736
PRINTS:PR00193 PROSITE:PS50096 SMART:SM00015 SMART:SM00242
ZFIN:ZDB-GENE-060531-50 GO:GO:0005524 GO:GO:0003774 GO:GO:0016459
InterPro:IPR015650 PANTHER:PTHR13140:SF22
GeneTree:ENSGT00680000099788 EMBL:BX510649 EMBL:BX511237
IPI:IPI00500057 RefSeq:XP_001924009.1 Ensembl:ENSDART00000139917
GeneID:100149148 KEGG:dre:100149148 OMA:DYNVSGW NextBio:20792773
ArrayExpress:F1R6C7 Uniprot:F1R6C7
Length = 1933
Score = 125 (49.1 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 49/247 (19%), Positives = 112/247 (45%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ + + + K + L+ Q+ +++ E
Sbjct: 957 LELTLAKVEKEKHATENKVKNLTEEMASQDESIAKLTKEKKALQEAHQQTLDDLQAEEDK 1016
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKES--NVIGSKF 117
VN L + +TK++Q +L +LE KK ++E AK +L+ K +ES ++ K
Sbjct: 1017 VN--TLTKSKTKLEQQVDDLEGSLEQEKKLRMDLERAKRKLEGDLKLAQESIMDLENDKQ 1074
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
+ K FE S++E S ++ KK+ +L+A +E+++ + + ++
Sbjct: 1075 QSEEKIKKKDFETSQLLSKIEDEQSLGAQLQKKIKELQARIEELEEEIEAERAARAKVEK 1134
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ + E+ E RL + A ++ +K E + R ++ S + ++
Sbjct: 1135 QRADLSRELEEISERLEEAGGATAAQIEMNKKREAEFQKLRRDLEESTLQHEATAAALRK 1194
Query: 238 KSENRVS 244
K + V+
Sbjct: 1195 KQADSVA 1201
Score = 52 (23.4 bits), Expect = 0.00053, Sum P(2) = 0.00053
Identities = 22/108 (20%), Positives = 48/108 (44%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGG---GSNPIRGLMGRKATVSTDTSLVKD 477
L++A+ + GG ++ LE + E + G++ ++G+ + V T ++
Sbjct: 1797 LDEAENLAMKGGKKQLQKLESRVRELESEIDAEQRRGADAVKGVRKYERRVKELTYQTEE 1856
Query: 478 LEVKEKRLASLETELRI----LSQQKMEVETQLNCTGNELKYKKQEYD 521
+ RL L +L++ +Q E E Q N ++L+ + E +
Sbjct: 1857 DKKNINRLQDLVDKLQLKVKAYKRQSEEAEEQANSHLSKLRKVQHELE 1904
>UNIPROTKB|F1P4L9 [details] [associations]
symbol:Gga.43632 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006891 "intra-Golgi vesicle-mediated
transport" evidence=IEA] [GO:0030173 "integral to Golgi membrane"
evidence=IEA] InterPro:IPR012955 Pfam:PF08172 GO:GO:0030173
GO:GO:0006891 GeneTree:ENSGT00530000063019 EMBL:AADN02025980
EMBL:AADN02025979 EMBL:AADN02025981 EMBL:AADN02025982
EMBL:AADN02025983 IPI:IPI00812492 Ensembl:ENSGALT00000040288
ArrayExpress:F1P4L9 Uniprot:F1P4L9
Length = 620
Score = 121 (47.7 bits), Expect = 0.00054, P = 0.00054
Identities = 57/243 (23%), Positives = 118/243 (48%)
Query: 15 KLTRVQLVETDLKALEPELRKA-VNFLELEN---CVQRKHNEIYQYERYVNMKNLGEHET 70
K+ R+ +ET+ + L L + F E++N ++ +I +YE+ +KN + E
Sbjct: 57 KVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQ--TLKN--QAEN 112
Query: 71 KVQQMEQELTANL-ESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFE 129
+ EQ+L + E +K + S S+L+ E K + K R +F KT+++
Sbjct: 113 IALEKEQKLQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYD 172
Query: 130 CDI-AKS-ELEIFLSTQSKETKKLADLEANLEKVQTTLTE-RKTLCEELTTRV---PAME 183
+ AK+ E+E+ ++ + ++ + E ++ L+ K+L +L T++ P +E
Sbjct: 173 EETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANKSL--QLATQIQKAPDVE 230
Query: 184 SEI-----AESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLK 238
I + LA RE A+L++ V++L +++ RE+ S++++ QL
Sbjct: 231 QAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQGSLTKLREN-----SSSQISQLEQQLT 285
Query: 239 SEN 241
++N
Sbjct: 286 AKN 288
>UNIPROTKB|E9PSR1 [details] [associations]
symbol:Lmna "Prelamin-A/C" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 RGD:620456 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
IPI:IPI00454367 PRIDE:E9PSR1 Ensembl:ENSRNOT00000041875
ArrayExpress:E9PSR1 Uniprot:E9PSR1
Length = 442
Score = 119 (46.9 bits), Expect = 0.00054, P = 0.00054
Identities = 67/251 (26%), Positives = 115/251 (45%)
Query: 1 MEVLYGKYDEE-RTEKLTRVQLVETDLKALEPEL--RKAVNFLELENCVQRKHNEIYQYE 57
+E G+ ++ + E L RV E L+ L+ EL +K + EL +R + + +
Sbjct: 40 LEAALGEAKKQLQDEMLRRVD-AENRLQTLKEELDFQKNIYSEELRETKRRHETRLVEID 98
Query: 58 RYVNMKNLGEHETKVQQMEQELTANLES-IKKCTDEMESAKS-ELKTVEKKG-KESNVIG 114
N K E E+++ QEL A E +++ E+E S +L + + SN++G
Sbjct: 99 ---NGKQR-EFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVG 154
Query: 115 SKFRWSVFSAKTRFECDIAK-SELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCE 173
+ + ++ R + A+ S+L+ L+ +KE K L DLE +L + + T R+ L E
Sbjct: 155 AAHE-ELQQSRIRIDSLSAQLSQLQKQLA--AKEAK-LRDLEDSLARERDT--SRRLLAE 208
Query: 174 ELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDF 233
+ E E+AE RAR+ E +LLD L E+ R+ ++ RL
Sbjct: 209 K--------EREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPS 260
Query: 234 VMQLKSENRVS 244
+S R S
Sbjct: 261 PTSQRSRGRAS 271
>WB|WBGene00003777 [details] [associations]
symbol:nmy-2 species:6239 "Caenorhabditis elegans"
[GO:0003774 "motor activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016459 "myosin complex" evidence=IEA]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IGI;IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0007413 "axonal fasciculation" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0009790 "embryo
development" evidence=IMP] [GO:0009949 "polarity specification of
anterior/posterior axis" evidence=IMP] [GO:0016476 "regulation of
embryonic cell shape" evidence=IGI] [GO:0016460 "myosin II complex"
evidence=ISS] [GO:0005819 "spindle" evidence=IDA] [GO:0005938 "cell
cortex" evidence=IDA] [GO:0032154 "cleavage furrow" evidence=IDA]
[GO:0005516 "calmodulin binding" evidence=IPI] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00242 GO:GO:0005524 GO:GO:0005938
GO:GO:0009792 GO:GO:0002009 GO:GO:0009949 GO:GO:0006898
GO:GO:0040007 GO:GO:0040010 GO:GO:0006915 GO:GO:0002119
GO:GO:0071688 GO:GO:0000910 GO:GO:0040035 GO:GO:0007413
GO:GO:0032154 GO:GO:0016476 GO:GO:0003774 HSSP:P08799 GO:GO:0016460
GeneTree:ENSGT00650000092896 EMBL:Z75550 EMBL:Z75538 PIR:T21174
RefSeq:NP_492186.3 ProteinModelPortal:G5EBY3 SMR:G5EBY3
IntAct:G5EBY3 EnsemblMetazoa:F20G4.3 GeneID:172562
KEGG:cel:CELE_F20G4.3 CTD:172562 WormBase:F20G4.3 OMA:APNERSF
NextBio:876055 Uniprot:G5EBY3
Length = 2003
Score = 130 (50.8 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 54/215 (25%), Positives = 91/215 (42%)
Query: 7 KYDEERTEKLTRVQLVETD-LKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNL 65
K DEER TR+ ++ + E R A ELE ++ + E+ K
Sbjct: 894 KMDEERLVLKTRLDAESSERAEIFEERSRMAARRDELEGILEEVSKRLEIEEQ--KAKKA 951
Query: 66 GEHETKVQQMEQELTANLE----SIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSV 121
K+ +M + L NLE S +K E S +S LK +E +G E G+K
Sbjct: 952 DSESRKLTEMVRHLEENLEDEERSRQKLLLEKNSIESRLKELEAQGLELEDSGNKLSKEK 1011
Query: 122 FSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPA 181
+ + R C+ S L + + K A LEA + ++ L + K T A
Sbjct: 1012 KALEER--CEDLSSRLIDEVERSKQLVKAKARLEATVAEINDELEKEKQQRHNAETARRA 1069
Query: 182 MESEIAESRARLADLTREEAKLLDQVEKLAREVSE 216
E+++ E + + TR+ +L +Q+ + E+S+
Sbjct: 1070 AETQLREEQESCLEKTRKAEELTNQLMRKESELSQ 1104
Score = 47 (21.6 bits), Expect = 0.00055, Sum P(2) = 0.00055
Identities = 16/48 (33%), Positives = 26/48 (54%)
Query: 474 LVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
L K LE K + E++ +Q+K+E +LN T ++LK +K D
Sbjct: 1189 LQKQLEETVKSSEEVVEEMKAQNQKKIE---ELNETIDQLKRQKISAD 1233
>UNIPROTKB|J9P5Q1 [details] [associations]
symbol:CEP250 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005814 "centriole" evidence=IEA]
InterPro:IPR026048 GO:GO:0005814 GeneTree:ENSGT00700000104019
PANTHER:PTHR23159:SF1 EMBL:AAEX03013911 Ensembl:ENSCAFT00000047311
Uniprot:J9P5Q1
Length = 1563
Score = 121 (47.7 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 57/258 (22%), Positives = 122/258 (47%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELEN-CVQRKHNEIYQYERY 59
+EV G+ + + + ++++ +++ L+ EL N E E R+ + Q +
Sbjct: 784 VEVTKGQLEVQIQTVIRAKEVIQGEVRCLKLELDSERNQAEQERETAARRLAQAEQEGQT 843
Query: 60 VNMKNLGEHETKVQQM----EQELTANLESIKKCTDEMESAKSELKT-VEKKGKESNVIG 114
+ HE +V ++ E+E + + + + K + +E K EL+T + ++ E+ I
Sbjct: 844 ALQQQKSAHEEEVNRLQEKWEKERSWHQQELDKALESLEKEKMELETRLREQQAEAEAIR 903
Query: 115 SKF---RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTL 171
++ R SA + + + K + + L T + K+LAD LE+++ + +K L
Sbjct: 904 TQREEERAEAESALCQMQLETEKERVSL-LETLLQTQKELADASQQLERLRQDMKVQK-L 961
Query: 172 CEELTTRVPAMESEIAESRARLA--------DLT--REEAKLLDQVEK-LAREVSEKRES 220
E+ TT++ +++++ E+R L DL +EE L Q + L + V E +
Sbjct: 962 KEQETTQI--LQAQLREARGELEQAAQQNRDDLVAVQEECGALLQAKMDLQKRVEELKSQ 1019
Query: 221 MQTSRSNNRLIDFVMQLK 238
+ + + RL++ +Q K
Sbjct: 1020 LVSRDDSRRLVEQEVQEK 1037
Score = 54 (24.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 12/46 (26%), Positives = 24/46 (52%)
Query: 468 VSTDTSLVKDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNEL 513
++ + L+++LE + L LR L + +V+ +L T N+L
Sbjct: 1119 LAQEAQLLEELETSQVTEQRLRASLRALEAKAAQVQLRLRSTENQL 1164
Score = 53 (23.7 bits), Expect = 0.00071, Sum P(2) = 0.00070
Identities = 10/41 (24%), Positives = 25/41 (60%)
Query: 480 VKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQEY 520
V+++ L+SL +++ + + E+ TQ+ E+K K+ ++
Sbjct: 1078 VRQQELSSLRQDMQESQEGQKELSTQVELLKQEVKEKEADF 1118
>MGI|MGI:97255 [details] [associations]
symbol:Myh6 "myosin, heavy polypeptide 6, cardiac muscle,
alpha" species:10090 "Mus musculus" [GO:0000146 "microfilament
motor activity" evidence=ISO;IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0001725 "stress fiber" evidence=IDA] [GO:0002026
"regulation of the force of heart contraction" evidence=IMP]
[GO:0002027 "regulation of heart rate" evidence=ISO;IMP]
[GO:0003774 "motor activity" evidence=IEA] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005859 "muscle myosin complex" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006936 "muscle contraction"
evidence=ISO] [GO:0006941 "striated muscle contraction"
evidence=IMP] [GO:0007512 "adult heart development"
evidence=ISO;IMP] [GO:0007522 "visceral muscle development"
evidence=IMP] [GO:0008016 "regulation of heart contraction"
evidence=IMP] [GO:0008217 "regulation of blood pressure"
evidence=IMP] [GO:0008307 "structural constituent of muscle"
evidence=ISO] [GO:0016459 "myosin complex" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019901 "protein
kinase binding" evidence=ISO] [GO:0030016 "myofibril"
evidence=ISO;IDA] [GO:0030018 "Z disc" evidence=IDA] [GO:0030048
"actin filament-based movement" evidence=IMP] [GO:0030049 "muscle
filament sliding" evidence=ISO] [GO:0030239 "myofibril assembly"
evidence=IMP] [GO:0030509 "BMP signaling pathway" evidence=IDA]
[GO:0030898 "actin-dependent ATPase activity" evidence=ISO]
[GO:0030899 "calcium-dependent ATPase activity" evidence=ISO]
[GO:0032982 "myosin filament" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043462 "regulation of
ATPase activity" evidence=IMP] [GO:0045214 "sarcomere organization"
evidence=IMP] [GO:0046982 "protein heterodimerization activity"
evidence=ISO] [GO:0048739 "cardiac muscle fiber development"
evidence=IMP] [GO:0055009 "atrial cardiac muscle tissue
morphogenesis" evidence=ISO] [GO:0055010 "ventricular cardiac
muscle tissue morphogenesis" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=IDA] [GO:0060420
"regulation of heart growth" evidence=IDA] InterPro:IPR000048
InterPro:IPR001609 InterPro:IPR002928 InterPro:IPR004009
Pfam:PF00063 Pfam:PF01576 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 MGI:MGI:97255
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0030018
GO:GO:0001701 GO:GO:0005925 GO:GO:0008217 GO:GO:0000146
GO:GO:0001725 GO:GO:0030049 GO:GO:0045214 GO:GO:0043462
GO:GO:0008307 GO:GO:0030509 GO:GO:0007512 GO:GO:0002026
GO:GO:0006941 GO:GO:0002027 GO:GO:0030048 GO:GO:0060070
GO:GO:0030899 eggNOG:COG5022 GO:GO:0007522 GO:GO:0016459
GO:GO:0055009 GO:GO:0055010 GO:GO:0048739 GO:GO:0060420
GO:GO:0005859 GO:GO:0030898 GO:GO:0032982 HOVERGEN:HBG004704
KO:K10352 HOGENOM:HOG000173959 CTD:4624 OMA:ISQQNSK ChiTaRS:MYH6
EMBL:M76598 EMBL:M76599 EMBL:M76600 EMBL:M76601 EMBL:M62404
IPI:IPI00129404 PIR:I49464 RefSeq:NP_001157643.1 RefSeq:NP_034986.1
UniGene:Mm.290003 ProteinModelPortal:Q02566 SMR:Q02566
IntAct:Q02566 STRING:Q02566 PhosphoSite:Q02566 SWISS-2DPAGE:Q02566
PaxDb:Q02566 PRIDE:Q02566 Ensembl:ENSMUST00000081857 GeneID:17888
KEGG:mmu:17888 GeneTree:ENSGT00680000099788 InParanoid:Q02566
NextBio:292705 Bgee:Q02566 Genevestigator:Q02566
GermOnline:ENSMUSG00000040752 Uniprot:Q02566
Length = 1938
Score = 120 (47.3 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 52/227 (22%), Positives = 109/227 (48%)
Query: 1 MEVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLE-LENCVQRKHNEIYQYERY 59
+E+ K ++E+ +V+ + ++ L+ + K + L+ Q+ +++ E
Sbjct: 959 LELTLAKVEKEKHATENKVKNLTEEMAGLDEIIAKLTKEKKALQEAHQQALDDLQAEEDK 1018
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRW 119
VN L + + K++Q +L +LE KK ++E AK +L+ K +ES +
Sbjct: 1019 VN--TLTKSKVKLEQQVDDLEGSLEQEKKVRMDLERAKRKLEGDLKLTQESIM------- 1069
Query: 120 SVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRV 179
+ + K + E + K E +I S++ K+ D +A ++Q L E + EEL +
Sbjct: 1070 DLENDKLQLEEKLKKKEFDI-----SQQNSKIEDEQALALQLQKKLKENQARIEELEEEL 1124
Query: 180 PAMESEIAESRARLADLTREEAKLLDQVEKLAR------EVSEKRES 220
A + A+ +DL+RE ++ +++E+ E+++KRE+
Sbjct: 1125 EAERTARAKVEKLRSDLSRELEEISERLEEAGGATSVQIEMNKKREA 1171
Score = 57 (25.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 19/106 (17%), Positives = 44/106 (41%)
Query: 421 LNQAKRIGYSGGGYRMVTLEGAIIEPSGTMSGGGSNPIRGLMGRKATVSTDTSLVKDLEV 480
L++A++I GG ++ LE + E + + G + + L E
Sbjct: 1799 LDEAEQIALKGGKKQLQKLEARVRELENELEAEQKRNAESVKGMRKSERRIKELTYQTEE 1858
Query: 481 KEKRLASLET-----ELRILSQQKMEVETQLNCTGNELKYKKQEYD 521
+K L L+ +L++ + ++ E + N K++K +++
Sbjct: 1859 DKKNLMRLQDLVDKLQLKVKAYKRQAEEAEEQANTNLSKFRKVQHE 1904
>SGD|S000004300 [details] [associations]
symbol:IMH1 "Protein involved in vesicular transport"
species:4932 "Saccharomyces cerevisiae" [GO:0043001 "Golgi to
plasma membrane protein transport" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IEA;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=IMP] [GO:0003674
"molecular_function" evidence=ND] [GO:0000042 "protein targeting to
Golgi" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006950 "response to stress" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] InterPro:IPR000237 Pfam:PF01465
PROSITE:PS50913 SMART:SM00755 SGD:S000004300 GO:GO:0005829
GO:GO:0005794 GO:GO:0000139 GO:GO:0006950 EMBL:BK006945
eggNOG:NOG12793 GO:GO:0043001 EMBL:U17247 GO:GO:0000042 PIR:S51441
RefSeq:NP_013412.1 ProteinModelPortal:Q06704 DIP:DIP-5583N
IntAct:Q06704 MINT:MINT-565482 STRING:Q06704 PaxDb:Q06704
EnsemblFungi:YLR309C GeneID:851018 KEGG:sce:YLR309C CYGD:YLR309c
GeneTree:ENSGT00700000105029 HOGENOM:HOG000113062 OMA:CETCAEY
OrthoDB:EOG4MWCFH NextBio:967586 Genevestigator:Q06704
GermOnline:YLR309C Uniprot:Q06704
Length = 911
Score = 118 (46.6 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 50/208 (24%), Positives = 96/208 (46%)
Query: 22 VETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQELTA 81
V+T L A +L N L E ++R + + + + L + E + + EQ
Sbjct: 95 VDT-LPAFFQDLNNKNNLLNDE--IKRLTKQNSEIPESASSETLKDKEEEFLKKEQNYKN 151
Query: 82 NLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELEIFL 141
+++ +KK +ME+ EL TV+K+ K V G + + + E + K + E+ +
Sbjct: 152 DIDDLKK---KMEALNIELDTVQKE-KNDTVSGLREKIVALENILKEEREAKKQKEEVSI 207
Query: 142 STQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLTREEA 201
S + KE +LA +LE + +TE + +T + SE+AE L + R+ +
Sbjct: 208 S-ELKE--ELAIKNHSLEDSRMKITELEQNLSSKSTIMEEKSSELAELNITLKEKERKLS 264
Query: 202 KLLDQVEKLAREVSEKRESMQTSRSNNR 229
+L ++++L + +S + R NR
Sbjct: 265 ELEKKMKELPKAISHQNVGNNNRRKKNR 292
Score = 52 (23.4 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 14/57 (24%), Positives = 30/57 (52%)
Query: 474 LVKDLEVKEK-RLASLETELRILSQQKMEVETQLNCTGNELKYKKQEYDTCLIDVKS 529
LV D + + + LE +L L+ +K ++E +L+ + + QE+ + ++KS
Sbjct: 658 LVSDSQTDDSSKQKELENKLAYLTDEKNKLEAELDLQTSRKATELQEWKHTVTELKS 714
Score = 51 (23.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 476 KDLEVKEKRLASLETELRILSQQKMEVETQLNCTGNELKYKKQE 519
K+LE L + L+ + + EV L GNEL K E
Sbjct: 369 KELETLNTELIDTKKSLKEKNSELEEVRDMLRTVGNELVDAKDE 412
Score = 51 (23.0 bits), Expect = 0.00071, Sum P(2) = 0.00071
Identities = 24/78 (30%), Positives = 38/78 (48%)
Query: 458 IRGLMGRKATVSTD-TSLVKDLEVKEKRLASLETELRILSQQK--MEVET-QLNCT---- 509
I L K+ ++ + TSL + KEK ++ LE +++ S+QK E T QL
Sbjct: 491 ISQLTYEKSNITKELTSLRTSYKQKEKTVSYLEEQVKQFSEQKDVAEKSTEQLRKDHAKI 550
Query: 510 GNELKYKKQEYDTCLIDV 527
N L K+E +T D+
Sbjct: 551 SNRLDLLKKENETLHNDI 568
>POMBASE|SPCC645.05c [details] [associations]
symbol:myo2 "myosin II heavy chain" species:4896
"Schizosaccharomyces pombe" [GO:0000146 "microfilament motor
activity" evidence=IDA] [GO:0000915 "cytokinesis, actomyosin
contractile ring assembly" evidence=IMP] [GO:0003779 "actin
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005826 "actomyosin contractile ring" evidence=IDA] [GO:0016460
"myosin II complex" evidence=IDA] [GO:0030899 "calcium-dependent
ATPase activity" evidence=IDA] [GO:0071520 "actin filament bundle
convergence involved in cytokinetic actomyosin contractile ring
assembly" evidence=NAS] InterPro:IPR000048 InterPro:IPR001609
InterPro:IPR004009 Pfam:PF00063 Pfam:PF02736 PRINTS:PR00193
PROSITE:PS50096 SMART:SM00015 SMART:SM00242 PomBase:SPCC645.05c
GO:GO:0005524 GO:GO:0005634 GO:GO:0003779 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0000146 GO:GO:0005826 GO:GO:0030899
eggNOG:COG5022 GO:GO:0016460 HOGENOM:HOG000173958 OrthoDB:EOG42591S
EMBL:U75357 PIR:T41522 RefSeq:NP_588114.1 ProteinModelPortal:Q9USI6
STRING:Q9USI6 PRIDE:Q9USI6 EnsemblFungi:SPCC645.05c.1
GeneID:2539513 KEGG:spo:SPCC645.05c OMA:LASSENK NextBio:20800674
GO:GO:0071520 Uniprot:Q9USI6
Length = 1526
Score = 115 (45.5 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 63/243 (25%), Positives = 104/243 (42%)
Query: 2 EVLYGKYDEERTEKLTRVQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQ--YERY 59
E++ KY+ ++ + ++ + VE DL L N L E + EI + ER
Sbjct: 832 EIIELKYELKKQQN-SKSE-VERDLVETNNSLTAVENLLTTERAIALDKEEILRRTQERL 889
Query: 60 VNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESAKSELKT--VEKKGKESNVIGSKF 117
N+++ ETK Q + L S+K+ +E+ES E KT VE E N + K
Sbjct: 890 ANIED-SFSETK--QQNENLQRESASLKQINNELESELLE-KTSKVETLLSEQNELKEKL 945
Query: 118 RWSVFSAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTT 177
S + + D K ELE + + A+ + +Q T+ + ++LT
Sbjct: 946 -----SLEEKDLLD-TKGELESLRENNATVLSEKAEFNEQCKSLQETIVTKDAELDKLTK 999
Query: 178 RVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQL 237
+ ++EI E R L + E K + Q L+ + KR + R N+ LI V L
Sbjct: 1000 YISDYKTEIQEMR--LTNQKMNE-KSIQQEGSLSESL--KRVK-KLERENSTLISDVSIL 1053
Query: 238 KSE 240
K +
Sbjct: 1054 KQQ 1056
Score = 60 (26.2 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 18/68 (26%), Positives = 37/68 (54%)
Query: 465 KATVSTDTSLVKDLEVKEKRLASL-ETELRILSQQKMEVETQLNCTGNELKYKKQEYDTC 523
K ++ SL K+LE KE++ +L + L+ + Q E+ L ++L+ K++Y+
Sbjct: 1120 KECLNNIKSLTKELENKEEKCQNLSDASLKYIELQ--EIHENLLLKVSDLENYKKKYEGL 1177
Query: 524 LIDVKSPK 531
+D++ K
Sbjct: 1178 QLDLEGLK 1185
>UNIPROTKB|G3V8M3 [details] [associations]
symbol:Lmna "Lamin A, isoform CRA_c" species:10116 "Rattus
norvegicus" [GO:0005198 "structural molecule activity"
evidence=IEA] [GO:0005882 "intermediate filament" evidence=IEA]
InterPro:IPR001664 RGD:620456 GO:GO:0005198 GO:GO:0005882
InterPro:IPR016044 InterPro:IPR018039 PANTHER:PTHR23239
Pfam:PF00038 PROSITE:PS00226 InterPro:IPR001322 Pfam:PF00932
EMBL:CH473976 UniGene:Rn.44161 PRIDE:G3V8M3
Ensembl:ENSRNOT00000026876 Uniprot:G3V8M3
Length = 462
Score = 119 (46.9 bits), Expect = 0.00058, P = 0.00058
Identities = 67/251 (26%), Positives = 115/251 (45%)
Query: 1 MEVLYGKYDEE-RTEKLTRVQLVETDLKALEPEL--RKAVNFLELENCVQRKHNEIYQYE 57
+E G+ ++ + E L RV E L+ L+ EL +K + EL +R + + +
Sbjct: 60 LEAALGEAKKQLQDEMLRRVD-AENRLQTLKEELDFQKNIYSEELRETKRRHETRLVEID 118
Query: 58 RYVNMKNLGEHETKVQQMEQELTANLES-IKKCTDEMESAKS-ELKTVEKKG-KESNVIG 114
N K E E+++ QEL A E +++ E+E S +L + + SN++G
Sbjct: 119 ---NGKQR-EFESRLADALQELRAQHEDQVEQYKKELEKTYSAKLDNARQSAERNSNLVG 174
Query: 115 SKFRWSVFSAKTRFECDIAK-SELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCE 173
+ + ++ R + A+ S+L+ L+ +KE K L DLE +L + + T R+ L E
Sbjct: 175 AAHE-ELQQSRIRIDSLSAQLSQLQKQLA--AKEAK-LRDLEDSLARERDT--SRRLLAE 228
Query: 174 ELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDF 233
+ E E+AE RAR+ E +LLD L E+ R+ ++ RL
Sbjct: 229 K--------EREMAEMRARMQQQLDEYQELLDIKLALDMEIHAYRKLLEGEEERLRLSPS 280
Query: 234 VMQLKSENRVS 244
+S R S
Sbjct: 281 PTSQRSRGRAS 291
>UNIPROTKB|F1NGM7 [details] [associations]
symbol:Gga.43632 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0006891 "intra-Golgi vesicle-mediated
transport" evidence=IEA] [GO:0030173 "integral to Golgi membrane"
evidence=IEA] InterPro:IPR012955 Pfam:PF08172 GO:GO:0030173
GO:GO:0006891 OMA:DPYPLLE GeneTree:ENSGT00530000063019
EMBL:AADN02025980 EMBL:AADN02025979 EMBL:AADN02025981
EMBL:AADN02025982 EMBL:AADN02025983 IPI:IPI00819533
Ensembl:ENSGALT00000002791 ArrayExpress:F1NGM7 Uniprot:F1NGM7
Length = 658
Score = 121 (47.7 bits), Expect = 0.00058, P = 0.00058
Identities = 57/243 (23%), Positives = 118/243 (48%)
Query: 15 KLTRVQLVETDLKALEPELRKA-VNFLELEN---CVQRKHNEIYQYERYVNMKNLGEHET 70
K+ R+ +ET+ + L L + F E++N ++ +I +YE+ +KN + E
Sbjct: 95 KVQRMHDIETENQKLRETLEEYNKEFAEVKNQEVTIKALKEKIREYEQ--TLKN--QAEN 150
Query: 71 KVQQMEQELTANL-ESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFE 129
+ EQ+L + E +K + S S+L+ E K + K R +F KT+++
Sbjct: 151 IALEKEQKLQNDFAEKERKLQETQMSTASKLEEAEHKVQALQTALEKTRTELFDLKTKYD 210
Query: 130 CDI-AKS-ELEIFLSTQSKETKKLADLEANLEKVQTTLTE-RKTLCEELTTRV---PAME 183
+ AK+ E+E+ ++ + ++ + E ++ L+ K+L +L T++ P +E
Sbjct: 211 EETTAKADEIEMIMTDLERANQRAEVAQREAETLREQLSSANKSL--QLATQIQKAPDVE 268
Query: 184 SEI-----AESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLK 238
I + LA RE A+L++ V++L +++ RE+ S++++ QL
Sbjct: 269 QAIEVLTRSSLEVELAAKEREIAQLVEDVQRLQGSLTKLREN-----SSSQISQLEQQLT 323
Query: 239 SEN 241
++N
Sbjct: 324 AKN 326
>UNIPROTKB|E1BF47 [details] [associations]
symbol:TPR "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0031965 "nuclear membrane" evidence=IEA] [GO:0007094
"mitotic spindle assembly checkpoint" evidence=IEA] [GO:0005643
"nuclear pore" evidence=IEA] [GO:0000776 "kinetochore"
evidence=IEA] [GO:0006606 "protein import into nucleus"
evidence=IEA] [GO:0006434 "seryl-tRNA aminoacylation" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004828 "serine-tRNA ligase activity"
evidence=IEA] InterPro:IPR012929 InterPro:IPR015866 Pfam:PF07926
GO:GO:0005524 GO:GO:0005737 GO:GO:0000776 GO:GO:0007094
GO:GO:0031965 GO:GO:0005643 GO:GO:0006606 KO:K09291
InterPro:IPR009053 SUPFAM:SSF46579 GeneTree:ENSGT00700000104019
GO:GO:0004828 GO:GO:0006434 Gene3D:1.10.287.40 CTD:7175 OMA:RFIRREK
EMBL:DAAA02043627 IPI:IPI00694835 RefSeq:NP_001192552.1
UniGene:Bt.1386 Ensembl:ENSBTAT00000015848 GeneID:507869
KEGG:bta:507869 NextBio:20868255 Uniprot:E1BF47
Length = 2360
Score = 127 (49.8 bits), Expect = 0.00058, P = 0.00058
Identities = 58/241 (24%), Positives = 104/241 (43%)
Query: 5 YGKYDEERTEKLTRVQLVETDLKALEPEL-RKAVNFLELENCVQRKHNEIYQYERYVNMK 63
Y K E+ R+Q + +L L+ E+ R + +N +Q ++ + +
Sbjct: 1352 YRKLLSEKEVHTKRIQQLTEELGRLKAEIARSNASLTNNQNLIQSLKEDLNKVR--TEKE 1409
Query: 64 NLG-EHETKVQQMEQELTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVF 122
N+ E + K+ + QE + +KK ++ ELK + K E+ S
Sbjct: 1410 NIQKELDAKIIDI-QEKVKTITQVKKIGRRYKTQYEELKAQQDKVMET---------SAQ 1459
Query: 123 SAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
S+ E ++ E++ T S+ K LE +E +Q TL+E++ L + +
Sbjct: 1460 SSGDHQEQHVSVQEMQELKETLSQAETKSKSLENQVENLQKTLSEKEIEARSLQEQTLEL 1519
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSEK-RESMQTSRSN-NRLIDFVMQLKSE 240
+SE+A R L D T +E +L Q+ E EK R+++ ++S L QL E
Sbjct: 1520 QSELARLRQDLQDRTTQEEQLRQQIT----EKEEKTRKAIVAAKSKIAHLAGVKDQLTKE 1575
Query: 241 N 241
N
Sbjct: 1576 N 1576
>TAIR|locus:2194075 [details] [associations]
symbol:GC2 "AT1G18190" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005794
"Golgi apparatus" evidence=ISM;IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0009630 "gravitropism"
evidence=RCA] GO:GO:0016021 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005794 GO:GO:0000139 EMBL:AC034107 EMBL:AC069551
eggNOG:NOG147208 EMBL:EU249330 IPI:IPI00530572 RefSeq:NP_173257.2
UniGene:At.42983 UniGene:At.51660 PaxDb:B0F9L7 PRIDE:B0F9L7
EnsemblPlants:AT1G18190.1 GeneID:838398 KEGG:ath:AT1G18190
TAIR:At1g18190 HOGENOM:HOG000077714 InParanoid:B0F9L7 OMA:IKERENM
PhylomeDB:B0F9L7 ProtClustDB:CLSN2680005 Genevestigator:B0F9L7
Uniprot:B0F9L7
Length = 668
Score = 121 (47.7 bits), Expect = 0.00059, P = 0.00059
Identities = 53/228 (23%), Positives = 107/228 (46%)
Query: 14 EKLTRVQLVETDLK--ALEP-ELR-KAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHE 69
EKL+ ++VE K A E EL+ + LE + ++KHN R + L E
Sbjct: 346 EKLSLEKIVEERAKQQAQEAAELQTNMMETLEAADLEKQKHNNT----RMEVLTRLAGLE 401
Query: 70 TKVQQMEQELTANLESIKKCTDEMESAKS--ELK--TVEKKGKESNVIGSK---FRWSVF 122
+ ++ + L A + ++ D++ K ELK T+E+ + + IG + +
Sbjct: 402 AENAELTRSLAAGQKKLETQIDQVAVLKQQVELKESTLEELKRNTFNIGGRGTTLKQLDT 461
Query: 123 SAKTRFECDIAKSELEIFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAM 182
S +FE + ++E+ + + K LEA++E ++ L E + EL R+ +
Sbjct: 462 SRGDKFEHQMLEAEISLLTDKIGRLQDKATKLEADIEMMRKELEEPTEVEIELKRRLNQL 521
Query: 183 ESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQTSRSNNRL 230
+ + ++++ L+ E+A +L ++E ++R + E + T S+ L
Sbjct: 522 TDHLIQKQSQVEALSSEKATILFRIEAVSRLIEENKGMSATEASSQDL 569
>POMBASE|SPBC18H10.07 [details] [associations]
symbol:SPBC18H10.07 "WW domain-binding protein 4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0006396 "RNA processing" evidence=NAS] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0030529 "ribonucleoprotein complex"
evidence=NAS] [GO:0045132 "meiotic chromosome segregation"
evidence=IMP] InterPro:IPR000690 InterPro:IPR003604
InterPro:IPR013085 Pfam:PF06220 PROSITE:PS50171 SMART:SM00451
PomBase:SPBC18H10.07 GO:GO:0005730 GO:GO:0046872 EMBL:CU329671
GO:GO:0008270 GO:GO:0003676 GO:GO:0006396 GO:GO:0030529
GO:GO:0045132 PIR:T39771 RefSeq:NP_595731.1
ProteinModelPortal:O60138 EnsemblFungi:SPBC18H10.07.1
GeneID:2540647 KEGG:spo:SPBC18H10.07 eggNOG:NOG242926
OrthoDB:EOG4FR41K NextBio:20801771 Uniprot:O60138
Length = 224
Score = 113 (44.8 bits), Expect = 0.00060, P = 0.00060
Identities = 58/191 (30%), Positives = 83/191 (43%)
Query: 47 QRKHNEIYQYERYVNMKNLGEHETKVQQMEQELTANLESIKKCTDEMESA-KSELKTVEK 105
+R H + Y+++ + H + + + QEL NL K T SA SEL + EK
Sbjct: 27 RRSHEQTYKHQDAIKKVMDDIHRSNL--LRQELEKNLSIPKSATATTASAVSSELASYEK 84
Query: 106 KGKESNVIGSKFRWSVFSAKTRFECDIAKSELEI-FLSTQ--SKETKKLADLEANLEKVQ 162
KE K R S A T + DI S E +ST S LA E N E +
Sbjct: 85 PKKEH----PKLRPSKKKA-TLDDWDIPTSSTETDTISTTHTSYIPTLLAKQEENEETKE 139
Query: 163 TTLTERKTLCEELTTRVPAMESEIAESRARLADLTREEAKLLDQVEKLAREVSEKRESMQ 222
TT + ++L R EI E R + R + K LD+V KLA +E +S++
Sbjct: 140 TTTNKNESLPGTSLKR----NREIIEKEERSSFHFRVKPKNLDKVPKLAE--NEGNKSLE 193
Query: 223 TSRSNNRLIDF 233
+ SN + F
Sbjct: 194 SKESNENKVVF 204
>UNIPROTKB|E2RQF3 [details] [associations]
symbol:SASS6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0007099 "centriole replication" evidence=IEA]
[GO:0005814 "centriole" evidence=IEA] GO:GO:0005814 GO:GO:0007099
GeneTree:ENSGT00390000006932 EMBL:AAEX03004772 EMBL:AAEX03004773
Ensembl:ENSCAFT00000031863 OMA:IPAKNTI NextBio:20863235
Uniprot:E2RQF3
Length = 818
Score = 122 (48.0 bits), Expect = 0.00060, P = 0.00060
Identities = 47/225 (20%), Positives = 105/225 (46%)
Query: 19 VQLVETDLKALEPELRKAVNFLELENCVQRKHNEIYQYERYVNMKNLGEHETKVQQMEQE 78
++ ++T L +E EL++A + E R+ N E + K++ + +TKV +EQE
Sbjct: 436 IRELKTKLSGVEEELQRA----KQEVLSLRRENSTLDAECHEKEKHINQLQTKVAVLEQE 491
Query: 79 LTANLESIKKCTDEMESAKSELKTVEKKGKESNVIGSKFRWSVFSAKTRFECDIAKSELE 138
+ + + + + ++ + + +E+ G+++ V K ++ S ++ K+ E
Sbjct: 492 IKDKDQLVLRTKEAFDTIQEQKVALEENGEKNQVQLGKLEATIKS----LSAELLKAN-E 546
Query: 139 IFLSTQSKETKKLADLEANLEKVQTTLTERKTLCEELTTRVPAMESEIAESRARLADLTR 198
I Q L L L+ T +++ L E ++ + E+ + L +
Sbjct: 547 IIKKLQGD----LKTLMGKLKLKNTVTVQQEKLLAEKEDKLQKEQKELQDVGQALRIKEQ 602
Query: 199 EEAKLLDQVEKLAREVSEKRESMQTSRSNNRLIDFVMQLKSENRV 243
E KL +Q+E +++ E S Q ++N +LI ++ + +EN++
Sbjct: 603 EVCKLQEQLEATVQKLEE---SKQLLKNNEKLITWLNKELNENQL 644
WARNING: HSPs involving 46 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.312 0.129 0.343 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 531 518 0.00089 119 3 11 23 0.46 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 296
No. of states in DFA: 598 (64 KB)
Total size of DFA: 241 KB (2130 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 61.10u 0.11s 61.21t Elapsed: 00:00:18
Total cpu time: 61.22u 0.11s 61.33t Elapsed: 00:00:18
Start: Thu Aug 15 15:05:15 2013 End: Thu Aug 15 15:05:33 2013
WARNINGS ISSUED: 2