BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14070
(111 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q02645|HTS_DROME Protein hu-li tai shao OS=Drosophila melanogaster GN=hts PE=1 SV=2
Length = 1156
Score = 116 bits (291), Expect = 3e-26, Method: Composition-based stats.
Identities = 68/105 (64%), Positives = 76/105 (72%), Gaps = 22/105 (20%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNG-WKG---RKSNDRT 56
G+RTGYIYR PLIK DPP+P+NDVE+PPAVSSLGYLLEEEE++R G WK RK DR+
Sbjct: 386 GYRTGYIYRHPLIKSDPPKPKNDVELPPAVSSLGYLLEEEELFRQGIWKKGDIRKGGDRS 445
Query: 57 RWLNSPNVWKGRKSNDRTRWLNSPNVYQKVEILETGTSDPKKITK 101
RW LNSPNVYQKVE+LETGT DPKKITK
Sbjct: 446 RW------------------LNSPNVYQKVEVLETGTPDPKKITK 472
>sp|Q9U9K0|ADD1_CAEEL Adducin-related protein 1 OS=Caenorhabditis elegans GN=add-1 PE=2
SV=2
Length = 732
Score = 64.3 bits (155), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 51/105 (48%), Gaps = 20/105 (19%)
Query: 2 FRTGYIYRTPLIKGDPPRP-----RNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRT 56
F+TG++YR P ++ NDV VPP S+ G + E S R
Sbjct: 364 FQTGHVYRQPQLRPKSAMSTSMVNNNDVAVPPTTSAYGQIDETN-------LESVSAHRL 416
Query: 57 RWLNSPNVWKGRKSNDRTRWLNSPNVYQKVEILETGTSDPKKITK 101
L RK +R RW+NSPN YQKVE LE G +PKKITK
Sbjct: 417 ALL--------RKEQERVRWMNSPNAYQKVEFLEYGADNPKKITK 453
>sp|Q9UEY8|ADDG_HUMAN Gamma-adducin OS=Homo sapiens GN=ADD3 PE=1 SV=1
Length = 706
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRTRWLN 60
G+RTGY YR PLI+ + PR ++DVE+P V++ + D T L+
Sbjct: 382 GYRTGYAYRHPLIR-EKPRHKSDVEIPATVTAFSF-----------------EDDTVPLS 423
Query: 61 SPNVWKGRKSNDRTRWLNSPNVYQKVEILE---TGTSDPK-KIT 100
R+ ++TRWLNSPN Y KV + E G + P+ KIT
Sbjct: 424 PLKYMAQRQQREKTRWLNSPNTYMKVNVPEESRNGETSPRTKIT 467
>sp|Q9QYB5|ADDG_MOUSE Gamma-adducin OS=Mus musculus GN=Add3 PE=1 SV=2
Length = 706
Score = 58.9 bits (141), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRTRWLN 60
G+RTGY YR PL++ + PR ++DVE+P V++ + D + L+
Sbjct: 382 GYRTGYAYRHPLVR-EKPRHKSDVEIPATVTAFSF-----------------EDDSAPLS 423
Query: 61 SPNVWKGRKSNDRTRWLNSPNVYQKVEILE---TGTSDPK-KIT 100
R+ ++TRWLNSPN Y KV + E G + P+ KIT
Sbjct: 424 PLKFMAQRQQREKTRWLNSPNTYMKVNVPEESRNGETSPRTKIT 467
>sp|Q62847|ADDG_RAT Gamma-adducin OS=Rattus norvegicus GN=Add3 PE=1 SV=2
Length = 705
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/104 (34%), Positives = 54/104 (51%), Gaps = 22/104 (21%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRTRWLN 60
G+RTGY YR PL++ + PR ++DVE+P V++ + D + L+
Sbjct: 382 GYRTGYAYRHPLVR-EKPRHKSDVEIPATVTAFSF-----------------EDDSVPLS 423
Query: 61 SPNVWKGRKSNDRTRWLNSPNVYQKVEILE---TGTSDPK-KIT 100
R+ ++TRWLNSPN Y KV + E G + P+ KIT
Sbjct: 424 PLKYMAQRQQREKTRWLNSPNTYMKVNVPEESRNGETSPRTKIT 467
>sp|Q5R5V7|ADDB_PONAB Beta-adducin OS=Pongo abelii GN=ADD2 PE=2 SV=3
Length = 726
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 11/86 (12%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEE-----EMYRNGWKGRKSNDR 55
G+RTGY YR P ++ + + +++VE+P V++ ++ EE+ + ++ K +K ++
Sbjct: 376 GYRTGYTYRHPFVQ-EKTKHKSEVEIPATVTA--FVFEEDGAPVPALRQHAQKQQK--EK 430
Query: 56 TRWLNSPNVW-KGRKSNDRTRWLNSP 80
TRWLN+PN + + +++ R + SP
Sbjct: 431 TRWLNTPNTYLRVNVADEVQRSMGSP 456
>sp|P35612|ADDB_HUMAN Beta-adducin OS=Homo sapiens GN=ADD2 PE=1 SV=3
Length = 726
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 53/86 (61%), Gaps = 11/86 (12%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEE-----EMYRNGWKGRKSNDR 55
G+RTGY YR P ++ + + +++VE+P V++ ++ EE+ + ++ K +K ++
Sbjct: 376 GYRTGYTYRHPFVQ-EKTKHKSEVEIPATVTA--FVFEEDGAPVPALRQHAQKQQK--EK 430
Query: 56 TRWLNSPNVW-KGRKSNDRTRWLNSP 80
TRWLN+PN + + +++ R + SP
Sbjct: 431 TRWLNTPNTYLRVNVADEVQRSMGSP 456
>sp|Q9QYB8|ADDB_MOUSE Beta-adducin OS=Mus musculus GN=Add2 PE=1 SV=4
Length = 725
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 18/90 (20%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRTRWLN 60
G+RTGY YR P ++ + + +++VE+P V++ ++ EE+ + +
Sbjct: 376 GYRTGYTYRHPFVQ-EKTKHKSEVEIPATVTA--FVFEEDGVPVPALRQHAQ-------- 424
Query: 61 SPNVWKGRKSNDRTRWLNSPNVYQKVEILE 90
++ ++TRWLN+PN Y +V + +
Sbjct: 425 -------KQQKEKTRWLNTPNTYLRVNVAD 447
>sp|Q05764|ADDB_RAT Beta-adducin OS=Rattus norvegicus GN=Add2 PE=2 SV=4
Length = 725
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 18/90 (20%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEMYRNGWKGRKSNDRTRWLN 60
G+RTGY YR P ++ + + +++VE+P V++ ++ EE+ + +
Sbjct: 376 GYRTGYTYRHPFVQ-EKTKHKSEVEIPATVTA--FVFEEDGVPVPALRQHAQ-------- 424
Query: 61 SPNVWKGRKSNDRTRWLNSPNVYQKVEILE 90
++ ++TRWLN+PN Y +V + +
Sbjct: 425 -------KQQKEKTRWLNTPNTYLRVNVAD 447
>sp|P35611|ADDA_HUMAN Alpha-adducin OS=Homo sapiens GN=ADD1 PE=1 SV=2
Length = 737
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEM----YRNGWKGRKSNDRT 56
G+RTGY YR P ++ + + +DVEVP +V+ + + + R+ ++ ++ ++T
Sbjct: 388 GYRTGYPYRYPALR-EKSKKYSDVEVPASVTGYSFASDGDSGTCSPLRHSFQ-KQQREKT 445
Query: 57 RWLNS 61
RWLNS
Sbjct: 446 RWLNS 450
>sp|Q5RA10|ADDA_PONAB Alpha-adducin OS=Pongo abelii GN=ADD1 PE=2 SV=1
Length = 737
Score = 35.0 bits (79), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEM----YRNGWKGRKSNDRT 56
G+RTGY YR P ++ + + +DVEVP +V+ + + + R+ ++ ++ ++T
Sbjct: 388 GYRTGYPYRYPALR-EKSKKYSDVEVPASVTGYSFTSDGDSGTCSPLRHSFQ-KQQREKT 445
Query: 57 RWLNS 61
RWLNS
Sbjct: 446 RWLNS 450
>sp|Q63028|ADDA_RAT Alpha-adducin OS=Rattus norvegicus GN=Add1 PE=1 SV=2
Length = 735
Score = 35.0 bits (79), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEM----YRNGWKGRKSNDRT 56
G+RTGY YR P ++ + + +DVEVP +V+ + + + R+ ++ ++ ++T
Sbjct: 388 GYRTGYPYRYPALR-ERSKKYSDVEVPASVTGHSFASDGDSGTCSPLRHSFQ-KQQREKT 445
Query: 57 RWLNS 61
RWLNS
Sbjct: 446 RWLNS 450
>sp|Q9QYC0|ADDA_MOUSE Alpha-adducin OS=Mus musculus GN=Add1 PE=1 SV=2
Length = 735
Score = 33.1 bits (74), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 6/65 (9%)
Query: 1 GFRTGYIYRTPLIKGDPPRPRNDVEVPPAVSSLGYLLEEEEM----YRNGWKGRKSNDRT 56
G+RTGY YR P ++ + + +DVEVP +V+ + + + R+ ++ ++ ++T
Sbjct: 388 GYRTGYPYRYPALR-ERSKKYSDVEVPASVTGHSFASDGDSGTCSPLRHSFQ-KQQREKT 445
Query: 57 RWLNS 61
RWL+S
Sbjct: 446 RWLHS 450
>sp|Q61703|ITIH2_MOUSE Inter-alpha-trypsin inhibitor heavy chain H2 OS=Mus musculus
GN=Itih2 PE=1 SV=1
Length = 946
Score = 29.6 bits (65), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 78 NSPNVYQKVEILETGTSDPKKITKVETLITSSS 110
N N + EI+ G DP K+T+V+++IT++S
Sbjct: 517 NFHNYFGGSEIVVAGKFDPSKLTEVQSIITATS 549
>sp|Q9AR19|GCN5_ARATH Histone acetyltransferase GCN5 OS=Arabidopsis thaliana GN=HAG1 PE=1
SV=1
Length = 568
Score = 29.6 bits (65), Expect = 5.7, Method: Composition-based stats.
Identities = 16/36 (44%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 71 NDRTRWL-NSPNVYQKVEILETGTSDPKKITKVETL 105
++R R L N NVY K+E L+ P+KI KVE +
Sbjct: 391 DERIRELSNCQNVYPKIEFLKNEAGIPRKIIKVEEI 426
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.311 0.132 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,609,202
Number of Sequences: 539616
Number of extensions: 1926686
Number of successful extensions: 3041
Number of sequences better than 100.0: 19
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 2993
Number of HSP's gapped (non-prelim): 31
length of query: 111
length of database: 191,569,459
effective HSP length: 79
effective length of query: 32
effective length of database: 148,939,795
effective search space: 4766073440
effective search space used: 4766073440
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)