Query psy14071
Match_columns 414
No_of_seqs 403 out of 1831
Neff 6.3
Searched_HMMs 46136
Date Fri Aug 16 18:50:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14071.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14071hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3699|consensus 100.0 4.6E-71 9.9E-76 569.2 12.0 307 1-411 42-402 (598)
2 PRK07044 aldolase II superfami 100.0 6.4E-51 1.4E-55 394.2 28.0 241 77-344 9-250 (252)
3 PRK06486 hypothetical protein; 100.0 6.6E-50 1.4E-54 389.0 28.2 240 72-339 14-257 (262)
4 PRK07490 hypothetical protein; 100.0 5E-50 1.1E-54 386.5 27.0 231 80-339 6-240 (245)
5 PRK06661 hypothetical protein; 100.0 5.3E-50 1.2E-54 383.1 25.6 225 85-336 3-230 (231)
6 PRK06208 hypothetical protein; 100.0 1.1E-48 2.3E-53 382.1 26.5 233 77-339 35-269 (274)
7 PRK07090 class II aldolase/add 100.0 8.3E-48 1.8E-52 373.9 26.9 230 78-339 24-255 (260)
8 PRK06833 L-fuculose phosphate 100.0 1.1E-45 2.3E-50 349.7 24.9 202 84-294 5-207 (214)
9 PRK08087 L-fuculose phosphate 100.0 9.4E-45 2E-49 343.5 24.1 202 82-294 3-206 (215)
10 PRK08130 putative aldolase; Va 100.0 1.2E-44 2.7E-49 342.1 24.3 201 82-294 3-209 (213)
11 PRK12348 sgaE L-ribulose-5-pho 100.0 1.4E-44 3E-49 345.2 24.4 204 84-293 3-217 (228)
12 PRK05874 L-fuculose-phosphate 100.0 2E-44 4.4E-49 341.7 23.4 202 84-293 6-209 (217)
13 PRK06557 L-ribulose-5-phosphat 100.0 4E-44 8.6E-49 340.3 24.6 204 82-294 8-215 (221)
14 cd00398 Aldolase_II Class II A 100.0 6.7E-44 1.4E-48 335.9 23.6 200 85-292 3-206 (209)
15 TIGR00760 araD L-ribulose-5-ph 100.0 1.3E-43 2.9E-48 339.1 24.3 204 84-293 4-221 (231)
16 PRK08193 araD L-ribulose-5-pho 100.0 1.5E-43 3.3E-48 338.7 23.9 204 84-293 4-220 (231)
17 PRK13145 araD L-ribulose-5-pho 100.0 1.2E-42 2.7E-47 332.9 24.2 204 84-293 5-221 (234)
18 PRK12347 sgbE L-ribulose-5-pho 100.0 1.9E-42 4E-47 331.1 24.5 204 83-292 3-220 (231)
19 TIGR01086 fucA L-fuculose phos 100.0 1.6E-42 3.4E-47 328.0 23.1 202 82-294 2-205 (214)
20 PRK05834 hypothetical protein; 100.0 1.5E-42 3.2E-47 323.6 20.6 185 84-276 5-192 (194)
21 PF00596 Aldolase_II: Class II 100.0 3.2E-42 6.9E-47 317.4 21.5 179 87-269 1-184 (184)
22 COG0235 AraD Ribulose-5-phosph 100.0 1.7E-42 3.7E-47 329.0 19.8 203 80-290 3-209 (219)
23 PRK08333 L-fuculose phosphate 100.0 5.4E-42 1.2E-46 317.1 22.4 180 83-272 2-183 (184)
24 PRK06357 hypothetical protein; 100.0 5E-42 1.1E-46 325.1 21.9 188 84-276 5-203 (216)
25 PRK08660 L-fuculose phosphate 100.0 1.4E-41 3E-46 313.6 20.9 179 85-275 1-180 (181)
26 PRK13213 araD L-ribulose-5-pho 100.0 4E-40 8.6E-45 314.6 24.4 204 84-293 4-221 (231)
27 PRK03634 rhamnulose-1-phosphat 100.0 3.5E-39 7.7E-44 315.6 23.6 207 84-295 8-264 (274)
28 PRK06754 mtnB methylthioribulo 100.0 4.6E-39 1E-43 303.2 21.9 191 80-276 2-204 (208)
29 PRK09220 methylthioribulose-1- 100.0 4.6E-38 9.9E-43 295.6 21.8 186 82-275 3-202 (204)
30 TIGR02624 rhamnu_1P_ald rhamnu 100.0 7.2E-38 1.6E-42 305.5 23.3 211 82-295 6-262 (270)
31 PRK06755 hypothetical protein; 100.0 3E-37 6.4E-42 290.8 23.1 186 84-275 6-202 (209)
32 TIGR03328 salvage_mtnB methylt 100.0 1.5E-37 3.2E-42 289.7 20.5 176 89-272 1-191 (193)
33 PRK08324 short chain dehydroge 100.0 5.4E-28 1.2E-32 263.5 14.6 197 85-293 16-243 (681)
34 TIGR02632 RhaD_aldol-ADH rhamn 99.9 1.4E-23 2.9E-28 228.8 14.0 191 86-290 2-231 (676)
35 KOG2631|consensus 99.8 3.4E-19 7.5E-24 164.1 18.8 187 85-277 20-226 (238)
36 KOG3699|consensus 99.8 2.3E-20 5E-25 194.0 1.6 300 17-343 264-594 (598)
37 COG3347 Uncharacterized conser 99.4 9E-13 1.9E-17 131.8 11.3 172 88-272 19-221 (404)
38 PRK07090 class II aldolase/add 97.7 1.9E-05 4E-10 77.4 2.9 50 364-413 25-82 (260)
39 PRK06486 hypothetical protein; 97.5 6.3E-05 1.4E-09 73.8 3.1 51 363-413 20-79 (262)
40 PRK07044 aldolase II superfami 97.3 0.00013 2.8E-09 71.1 3.1 52 362-413 9-69 (252)
41 PRK06208 hypothetical protein; 96.1 0.0044 9.5E-08 61.3 3.1 49 365-413 37-95 (274)
42 PRK08324 short chain dehydroge 89.1 0.64 1.4E-05 51.5 5.8 135 108-285 259-396 (681)
43 KOG3189|consensus 48.2 57 0.0012 31.3 6.5 94 38-149 109-218 (252)
44 PF13406 SLT_2: Transglycosyla 40.2 45 0.00097 32.9 4.7 94 13-121 124-221 (262)
45 KOG3988|consensus 38.1 21 0.00046 35.8 2.0 27 155-181 77-103 (378)
46 PF03681 UPF0150: Uncharacteri 36.5 34 0.00074 24.2 2.5 23 236-258 15-38 (48)
47 TIGR02632 RhaD_aldol-ADH rhamn 32.5 91 0.002 34.8 6.2 55 231-287 336-390 (676)
48 PF08069 Ribosomal_S13_N: Ribo 28.0 24 0.00051 27.1 0.4 21 17-37 30-50 (60)
49 COG3347 Uncharacterized conser 25.7 1.7E+02 0.0038 30.5 6.2 52 234-287 338-389 (404)
50 PF14226 DIOX_N: non-haem diox 25.7 19 0.0004 30.0 -0.6 37 208-245 1-38 (116)
51 PF14165 YtzH: YtzH-like prote 24.5 88 0.0019 25.8 3.1 28 17-44 28-58 (87)
52 COG1598 Predicted nuclease of 23.9 99 0.0022 24.2 3.3 28 243-273 25-52 (73)
No 1
>KOG3699|consensus
Probab=100.00 E-value=4.6e-71 Score=569.20 Aligned_cols=307 Identities=50% Similarity=0.767 Sum_probs=276.2
Q ss_pred CccccchhhhccChhhHHHHHHHHHHHHHcCCCCchhhHHHhhhhccccccccccccccCCCcccCCCCCCCCccCCCCh
Q psy14071 1 MERRKRVEMIMNSRLFREELERIIEIQMKDGSGSATLLQSISDMMGLQGQRLQSAHLFRSSNCVVPINDIRGVESMGYAK 80 (414)
Q Consensus 1 me~~krv~~il~s~~f~~ele~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~pi~d~~g~e~~~~~~ 80 (414)
|||||||+||||||+||||||++||+ ||||
T Consensus 42 me~rkrv~~Ilqs~~F~~ELe~~i~~-----------L~~i--------------------------------------- 71 (598)
T KOG3699|consen 42 MEQRKRVTMILQSPSFREELENLIQE-----------LQQI--------------------------------------- 71 (598)
T ss_pred HHHhHHHHHHhcChhhhHHHHhhhHH-----------HHHH---------------------------------------
Confidence 99999999999999999999999999 6777
Q ss_pred hHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCch
Q psy14071 81 GEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTAT 160 (414)
Q Consensus 81 ~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e 160 (414)
.+||+||++||++| | +.|+|+|+|.|+|||+.|++++.|++++++|.++
T Consensus 72 ---~~rckla~~~rl~D--------------------------p--~~~he~tas~l~kv~~~g~iv~qgs~~~~vn~sg 120 (598)
T KOG3699|consen 72 ---LTRCKLAAVYRLAD--------------------------P--LLYHEITASSLVKVNIQGEIVDQGSTNLGVNQSG 120 (598)
T ss_pred ---HhhhhHHHhhhhcC--------------------------c--hhhhhcccccceeecccchhhhcccccccccccc
Confidence 57999999999998 5 8999999999999999999999999999999999
Q ss_pred HHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhCCeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEec
Q psy14071 161 FSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLS 240 (414)
Q Consensus 161 ~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLr 240 (414)
|.+|++||++|||||||||.|++...|+|.++|||+|++|+++.+|+|.||+|+|+..++++...+++.||++ ++++||
T Consensus 121 f~lhsai~~a~p~vrc~ihi~t~~~aavs~mk~gllp~s~~a~~lg~~~~~dy~~~~e~~~~~~~~~~~lg~~-kvl~lr 199 (598)
T KOG3699|consen 121 FFLHSAIYAARPDVRCIIHIHTSAVAAVSSMKCGLLPLSQEALVLGEVAYYDYQGILEDEEERIPLQKNLGPK-KVLVLR 199 (598)
T ss_pred cchhhhhhccCCceeEEEEeccchHHHHHHhhhcccccccccccccceeeeecccccccchhhhhHHhhcCcc-ceEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 999999
Q ss_pred CCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcCCCCCCCCCCCCCCCchhhHhhhhh
Q psy14071 241 NNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLEKKEKR 320 (414)
Q Consensus 241 NHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (414)
|||++++|+|++|||+++.++..|||+|+.+.+.|.+|++.++++++++....... +..+
T Consensus 200 N~g~~~~g~t~eeA~~~~~~~~~ace~qv~~~a~g~dnl~~~~~~~~~~~~~~~~~--------------------~~~~ 259 (598)
T KOG3699|consen 200 NHGVVSVGETVEEAFYYIFNLVLACEIQVSASAGGLDNLILLEEEKYKAINRFSVP--------------------SPPK 259 (598)
T ss_pred cccccccchhHHHHHHHhhcchhhhhhhhhhcccCccccccCcHhhhhhhhccccC--------------------Cccc
Confidence 99999999999999999999999999999988889999999999999877653211 3468
Q ss_pred hccchhhHHHHHHhhhhcCCCCCCCCCcc------cccCCcc-c--ccccccccc-------------------------
Q psy14071 321 WRIGGMEFEALMRMLDNAKIPTGYSSNCV------VPINDIR-G--VESMGYAKG------------------------- 366 (414)
Q Consensus 321 w~~g~~~feal~R~ld~~g~rTgy~~~~~------~~~nDve-~--~~~~~~s~~------------------------- 366 (414)
|+.|++|||||||||||+||||||.||+| ..++||+ + ++.+.+..+
T Consensus 260 ~r~ge~efe~lmr~ldn~~~rtg~~yR~p~~~~k~~~~sdV~~P~~v~~~~~~~d~~~v~~~r~~~~~~~~e~tRwlNsp 339 (598)
T KOG3699|consen 260 WRVGEQEFEALMRMLDNLGYRTGYNYRHPALREKPSKKSDVEIPATVTAFGFATDGAPVSPLRQAPQKQQREKTRWLNLP 339 (598)
T ss_pred cccchHHHHHHHHHHhhccccccccccchhhcccCCCccceecchhhhhhhhhccCCcCChhhhccchhhhhhhhhcCCc
Confidence 99999999999999999999999999994 5678998 3 332222211
Q ss_pred ---------chhhhhhHHHHHHHHhhhCccccccceEEEe----------eecCcccC-cccccC
Q psy14071 367 ---------EKILRCKVAAVYRLMDLYGWTQNIQNHITVS----------TLNPLVLK-GNILQS 411 (414)
Q Consensus 367 ---------E~~~R~~LAa~yrl~~~~gw~~~i~~his~r----------l~n~~g~~-~~~~~~ 411 (414)
|...|..+|++| ..+++|.+.+++|+++| ++||++.. .++++|
T Consensus 340 n~~~~~~~~e~~~~npka~t~--w~~~~~ne~s~~~~pVrIedP~qfvp~~~NP~Evle~rnkIr 402 (598)
T KOG3699|consen 340 NKVDEVDEEERGMRNPKAKTT--WVKEDWNEGSASHTPVRIEDPNQFVPLLINPKEVLEMRNKIR 402 (598)
T ss_pred cccccccHHhhccCCccccee--eeeccccccccCCceeeccCCCCccccccCHHHHHHHHhhHH
Confidence 122445688888 77899999999999999 59999987 555554
No 2
>PRK07044 aldolase II superfamily protein; Provisional
Probab=100.00 E-value=6.4e-51 Score=394.19 Aligned_cols=241 Identities=41% Similarity=0.673 Sum_probs=213.5
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCC
Q psy14071 77 GYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGV 156 (414)
Q Consensus 77 ~~~~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~ 156 (414)
.+++.||++|++|+.++|.++.+||+.+++||||+|+++++++|||||+|+.+++++++||++||++|+++++. ..++
T Consensus 9 ~~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~~~~~lITpsG~~~~~l~~~div~vd~~g~~veg~--~~~~ 86 (252)
T PRK07044 9 RVSPAEWQARVDLAAAYRLVALLGWDDLIYTHISARVPGEEHHFLINPYGLLFDEITASNLVKIDLDGNVVDDS--PYPV 86 (252)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCCccccCcEEEEEccCCCCeEEEcCCCCChhhcCHHHeEEECCCCCCcCCC--CCCC
Confidence 47889999999999999999999999999999999998666789999999999999999999999999999863 3345
Q ss_pred CCchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhCCeeeecCCCCCCcHHHHHHHHHHhCCCCc
Q psy14071 157 NTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLGELSTHPFTGYSRGDEEKERIVRNLGPNNK 235 (414)
Q Consensus 157 ~s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~ 235 (414)
+++|+.||.+||++||||+||||+||++++++|++..+++|++++++ ++|+|++++|.++..+.++++++++.|++ .+
T Consensus 87 ~pse~~lH~~iY~~rpdv~aViHtH~~~a~a~s~~~~~~~p~~~~~~~~~g~i~~~~y~~~~~~~e~~~~va~~l~~-~~ 165 (252)
T PRK07044 87 NPAGFTIHSAIHAARPDAHCVMHTHTTAGVAVSAQRDGLLPLSQHALQFYGRLAYHDYEGIALDLDEGERLVADLGD-KP 165 (252)
T ss_pred ChHHhHHHHHHHHhCCCCcEEEEECCHHHHHHHHhCCCCCcchHhHHHHcCCceeeCCCCCcCCHHHHHHHHHHhcc-CC
Confidence 67899999999999999999999999999999999888999998877 56789999998876567889999999997 68
Q ss_pred EEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcCCCCCCCCCCCCCCCchhhH
Q psy14071 236 VLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLE 315 (414)
Q Consensus 236 vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (414)
++||+|||+++||+|+++||+++++||++|++++.++++|. ++.+++++.++.+.+++-...
T Consensus 166 avLL~nHGvi~~G~~l~eA~~~~e~lE~~a~~~~~a~~lG~-~~~~~~~~~~~~~~~~~~~~~----------------- 227 (252)
T PRK07044 166 AMLLRNHGLLTVGRTVAEAFLLMYTLERACEIQVAAQAGGG-ELVLPPPEVAERTARQSLFDP----------------- 227 (252)
T ss_pred EEEECCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCHHHHHHHHHHHhhcc-----------------
Confidence 99999999999999999999999999999999999999995 468889998888877642110
Q ss_pred hhhhhhccchhhHHHHHHhhhhcCCCCCC
Q psy14071 316 KKEKRWRIGGMEFEALMRMLDNAKIPTGY 344 (414)
Q Consensus 316 ~~~~~w~~g~~~feal~R~ld~~g~rTgy 344 (414)
.-..++++|++|+|+|++.+ .||
T Consensus 228 ----~~~~~~~~~~~~~r~~~~~~--~~~ 250 (252)
T PRK07044 228 ----GAGAGELAWPALLRKLDRID--PGY 250 (252)
T ss_pred ----cccchHhhHHHHHHHHHhhC--cCc
Confidence 00246789999999999986 454
No 3
>PRK06486 hypothetical protein; Provisional
Probab=100.00 E-value=6.6e-50 Score=388.97 Aligned_cols=240 Identities=30% Similarity=0.487 Sum_probs=209.5
Q ss_pred CCccCCCChhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCC
Q psy14071 72 GVESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGT 151 (414)
Q Consensus 72 g~e~~~~~~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~ 151 (414)
|.-+...+..++++|++|+.++|+++++||+.+++||||+|++++++.|||||+|..|++++++||++||++|++++++
T Consensus 14 ~~~~~~~~~~~~~~r~~l~~~~r~l~~~Gl~~gt~GNiSvR~~~~~~~~lITPsG~~~~~lt~eDlv~vd~dG~~veg~- 92 (262)
T PRK06486 14 GNRPLLDSDAVAQARVDLAACFRAAARHGLEEGICNHFSAVLPGHDDLFLVNPYGYAFSEITASDLLICDFDGNVLAGR- 92 (262)
T ss_pred CCCcccCCHHHHHHHHHHHHHHHHHHHcCCccccCceEEEEecCCCCEEEEcCCCCCcccCcHHHeEEECCCCCCcCCC-
Confidence 3344445667889999999999999999999999999999998766899999999999999999999999999999873
Q ss_pred CCCCCCC-chHHHHHHHHHhCCCccEEEecCChhHHHhhhc-cCCCccccHHHH-HhCCeeeec-CCCCCCcHHHHHHHH
Q psy14071 152 TNFGVNT-ATFSVHAAIHAARPDLKAIIHVATPAVVAVSSL-KCGLLPLSRESV-VLGELSTHP-FTGYSRGDEEKERIV 227 (414)
Q Consensus 152 ~~~~~~s-~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~-~~~L~pi~qea~-~~g~V~~~~-y~g~~~~~ee~~~la 227 (414)
.+|+ +++.||.+||++||||+||||+||+|++++|++ +.++.++.++++ ++|++++.+ |.+...+.+++++++
T Consensus 93 ---~kPs~~e~~lH~~IYr~rpDv~aVvHtHs~~a~a~s~~~~~~l~~~~~~~~~~~g~i~~~~~~~~~~~s~ela~~va 169 (262)
T PRK06486 93 ---GEPEATAFFIHARIHRAIPRAKAAFHTHMPYATALSLTEGRPLTTLGQTALKFYGRTAVDEDYNGLALDAAEGDRIA 169 (262)
T ss_pred ---CCCChhHHHHHHHHHHhCCCCCEEEEeCChHHhhhhhcCCCCCCcccHHHHHHCCCeeeccCCCCccCchhHHHHHH
Confidence 2465 579999999999999999999999999999998 456777778776 678899987 656655689999999
Q ss_pred HHhCCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcCCCCCCCCCCCC
Q psy14071 228 RNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTN 307 (414)
Q Consensus 228 ~~Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~~~~~~~~~~~~~~ 307 (414)
++|++ .+++||+|||+++||+|+++||++++++|++|++|+.+++.|. ++.+++++.++++++.+...
T Consensus 170 ~al~~-~~avLL~nHG~v~~G~~l~eA~~~~~~lE~~a~i~~~a~~~G~-~~~~~~~~~~~~~~~~~~~~---------- 237 (262)
T PRK06486 170 RAMGD-ADIVFLKNHGVMVCGPRIAEAWDDLYYLERACEVQVLAMSTGR-PLVPVDPAIAAAVARQMREG---------- 237 (262)
T ss_pred HHhCc-CCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCHHHHHHHHHHHhcc----------
Confidence 99996 6899999999999999999999999999999999999999995 46889999998887764221
Q ss_pred CCCchhhHhhhhhhccchhhHHHHHHhhhhcC
Q psy14071 308 SPTPAVLEKKEKRWRIGGMEFEALMRMLDNAK 339 (414)
Q Consensus 308 ~~~~~~~~~~~~~w~~g~~~feal~R~ld~~g 339 (414)
.|..++++|+||+|++++.+
T Consensus 238 ------------~~~~~~~~~~a~~~~~~~~~ 257 (262)
T PRK06486 238 ------------DRESARLHLEALRRTLDREE 257 (262)
T ss_pred ------------ccchhHhhHHHHHHHHHhhC
Confidence 12346889999999999986
No 4
>PRK07490 hypothetical protein; Provisional
Probab=100.00 E-value=5e-50 Score=386.51 Aligned_cols=231 Identities=25% Similarity=0.451 Sum_probs=204.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCC-CcccCCCCCCCCCC
Q psy14071 80 KGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRG-DIIEPGTTNFGVNT 158 (414)
Q Consensus 80 ~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG-~vv~~~~~~~~~~s 158 (414)
..|+++|++|++++|.++++||+.+++||||+|+++++++|||||+|..|++++++||++||+|| +++++. ..+|+
T Consensus 6 ~~~~~~r~~l~~~~r~l~~~Gl~~g~~GniS~r~~~~~~~~lItpsG~~~~~l~~~div~vd~dg~~~~~g~---~~~ps 82 (245)
T PRK07490 6 SDEEQIRVDLAAAFRWIARLGMHEAVANHFSAAVSADGKQFLLNPKWKHFSRIRASDLLLLDADDPSTAERP---DVPDA 82 (245)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCcccccceEEEEccCCCCeEEEcCCCCChhhCcHHHeEEEcCCCCcccCCC---CCCCc
Confidence 47889999999999999999999999999999998666799999999999999999999999999 466653 13479
Q ss_pred chHHHHHHHHHhCCCccEEEecCChhHHHhhhccCC-CccccHHHH-HhCCeeee-cCCCCCCcHHHHHHHHHHhCCCCc
Q psy14071 159 ATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCG-LLPLSRESV-VLGELSTH-PFTGYSRGDEEKERIVRNLGPNNK 235 (414)
Q Consensus 159 ~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~-L~pi~qea~-~~g~V~~~-~y~g~~~~~ee~~~la~~Lg~~~~ 235 (414)
+|+.||.+||++||||+||||+||++++|+|+++.+ ++|+++++. ++|+||++ +|.+++. .+++++++++|++ .+
T Consensus 83 se~~lH~~iYr~rpdv~aVvHtH~~~ata~s~~~~~~lp~~~~~~~~~~g~v~~~~~y~~~~~-~ela~~v~~~l~~-~~ 160 (245)
T PRK07490 83 TAWAIHGQIHRRLPHARCVMHVHSVYATALACLADPTLPPIDQNTARFFNRVAVDTLYGGMAL-EEEGERLAGLLGD-KR 160 (245)
T ss_pred HHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHhcCCCCCCccHHHHHHcCCeeeccCCCCcCc-HHHHHHHHHHhCc-CC
Confidence 999999999999999999999999999999999766 888988876 77899997 6998874 6899999999997 68
Q ss_pred EEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcCCCCCCCCCCCCCCCchhhH
Q psy14071 236 VLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLE 315 (414)
Q Consensus 236 vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (414)
++||+|||+++||+|+++||.+++.+|++|++|+.++++|. ++..|++++++.+++.+....
T Consensus 161 avlL~nHG~v~~G~~~~eA~~~~e~lE~~a~~~l~a~~~G~-~~~~l~~~~~~~~~~~~~~~~----------------- 222 (245)
T PRK07490 161 RLLMGNHGVLVTGDTVAEAFDDLYYFERACQTYITALSTGQ-PLRVLSDAVAEKTARDWEDYP----------------- 222 (245)
T ss_pred EEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhCCC-CCCCCCHHHHHHHHHHHhhcc-----------------
Confidence 99999999999999999999999999999999999999995 357899999988876552211
Q ss_pred hhhhhhccchhhHHHHHHhhhhcC
Q psy14071 316 KKEKRWRIGGMEFEALMRMLDNAK 339 (414)
Q Consensus 316 ~~~~~w~~g~~~feal~R~ld~~g 339 (414)
+.+..+|++|+|+|.+.+
T Consensus 223 ------~~~~~~~~~~~~~~~~~~ 240 (245)
T PRK07490 223 ------GFSRQHFAELKALLDEED 240 (245)
T ss_pred ------chHHhhHHHHHHHHHhhC
Confidence 124567999999999987
No 5
>PRK06661 hypothetical protein; Provisional
Probab=100.00 E-value=5.3e-50 Score=383.15 Aligned_cols=225 Identities=31% Similarity=0.598 Sum_probs=197.2
Q ss_pred HHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHHH
Q psy14071 85 LRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVH 164 (414)
Q Consensus 85 ~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~iH 164 (414)
+|++|++++|.++++||+.+++||||+|+++ .++|||||+|..+++++++||++||++|++++++ ..+.+++|+.||
T Consensus 3 ~r~~l~~a~r~l~~~Gl~~g~~GNiS~R~~~-~~~~lItPsG~~~~~l~~~div~vd~dG~~~~g~--~~~~~sse~~lH 79 (231)
T PRK06661 3 IKYNLAAAYRIMAYLSLDDHTYTHLSARPKN-ADFYYIYPFGLRFEEVTTENLLKVSLDGQILEGE--EYQYNKTGYFIH 79 (231)
T ss_pred HHHHHHHHHHHHHHcCCcccCCceEEEEeCC-CCEEEEeCCCCChhhCcHHHeEEECCCCCCcCCC--CCCCChhHHHHH
Confidence 6899999999999999999999999999754 4689999999999999999999999999999874 233468899999
Q ss_pred HHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhCCeeeecCCCCCCc-HHHHHHHHHHhCCCCcEEEecCC
Q psy14071 165 AAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLGELSTHPFTGYSRG-DEEKERIVRNLGPNNKVLFLSNN 242 (414)
Q Consensus 165 ~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g~V~~~~y~g~~~~-~ee~~~la~~Lg~~~~vllLrNH 242 (414)
.+||++||||+||||+||++++|+|++..+++|+++..+ ++|+|||++|.++.++ .+++++++++|++ ++++||+||
T Consensus 80 ~~IY~~rpdv~aVvH~H~~~a~a~s~~~~~~~p~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~l~~-~~avll~nH 158 (231)
T PRK06661 80 GSIYKTRPDISAIFHYHTPASIAVSALKCGLLPISQWALHFYDRISYHNYNSLALDADKQSSRLVNDLKQ-NYVMLLRNH 158 (231)
T ss_pred HHHHHcCCCCCEEEEECChHHHHHHhcCCCCCCccHhHHHHcCCceecCCCccccCchhHHHHHHHHhCC-CCEEEECCC
Confidence 999999999999999999999999999989999988877 5678999999988774 6889999999997 689999999
Q ss_pred ceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcC-CCCCCCCCCHHHHHHHHHhhcCCCCCCCCCCCCCCCchhhHhhhhhh
Q psy14071 243 GAVCCGETVEEAFYNVYNLVAACEAQLKLMPA-GLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLEKKEKRW 321 (414)
Q Consensus 243 Gvl~~G~tv~eAf~~~~~lE~aceiql~A~a~-G~~~l~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w 321 (414)
|++++|+|+++||+++++||++|++|+.++++ |. +..+.+++.++++.+.... .+|
T Consensus 159 G~v~~G~sl~eA~~~~~~lE~~a~~~~~a~~~~g~-~~~l~~~~~~~~~~~~~~~----------------------~~~ 215 (231)
T PRK06661 159 GAITCGKTIHEAMFYTYHLEQACKTQCLLNSTKKQ-ELIIPSVEICKKTVKDLLS----------------------FEE 215 (231)
T ss_pred CCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCCCCHHHHHHHHHHHhc----------------------ccc
Confidence 99999999999999999999999999999999 63 4555566666666554211 124
Q ss_pred ccchhhHHHHHHhhh
Q psy14071 322 RIGGMEFEALMRMLD 336 (414)
Q Consensus 322 ~~g~~~feal~R~ld 336 (414)
..++.+|++|+|.||
T Consensus 216 ~~~~~~~~~~~r~~~ 230 (231)
T PRK06661 216 DLGKRDWAAWLRLIK 230 (231)
T ss_pred chhHhhHHHHHHHhc
Confidence 457889999999987
No 6
>PRK06208 hypothetical protein; Provisional
Probab=100.00 E-value=1.1e-48 Score=382.12 Aligned_cols=233 Identities=29% Similarity=0.418 Sum_probs=206.2
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCC
Q psy14071 77 GYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGV 156 (414)
Q Consensus 77 ~~~~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~ 156 (414)
+++.+-+..|++|+.++|+++++||+++++||||+|++++++.|||||+|..|++++++||++||++|++++|. .+.
T Consensus 35 ~~~~~~~~~~~~l~~~~r~l~~~Gl~~g~~GNIS~R~~~~~~~~lITPsG~~~~~lt~eDiv~vd~dG~~v~G~---~ps 111 (274)
T PRK06208 35 TVAEERLHRKQRLAAAFRLFARFGFDEGLAGHITARDPELPDHFWVNPLGVHFSQIKVSDLLLVDHDGEVVEGD---RPL 111 (274)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCccccCceEEEEccCCCCeEEEcCCCCChhhCcHHHeEEECCCCCCcCCC---CCC
Confidence 44456666799999999999999999999999999998766899999999999999999999999999999863 234
Q ss_pred CCchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhCCeeeec-CCCCCCcHHHHHHHHHHhCCCC
Q psy14071 157 NTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLGELSTHP-FTGYSRGDEEKERIVRNLGPNN 234 (414)
Q Consensus 157 ~s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g~V~~~~-y~g~~~~~ee~~~la~~Lg~~~ 234 (414)
+++|+.+|.+||++||||+||||+||++++++|+++..++|++++.. ++|++|+++ |.|...+.++++++++.|++ +
T Consensus 112 ~~sE~~lH~~IYr~rpDv~AViHtHpp~ata~s~~~~~l~~i~~~~~~~~~~ip~~~~~~g~~~s~ela~~va~~l~~-~ 190 (274)
T PRK06208 112 NRAAFAIHSAIHEARPDVVAAAHTHSTYGKAWSTLGRPLDPITQDACAFYEDHALFDDFTGVVVDTSEGRRIAAALGT-H 190 (274)
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEeCchHHHHHHHhCCCCChhhHHHHHHcCCceeccCCCCccCchHHHHHHHHHhcc-C
Confidence 45799999999999999999999999999999999999999998876 567888764 55544467999999999997 6
Q ss_pred cEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcCCCCCCCCCCCCCCCchhh
Q psy14071 235 KVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVL 314 (414)
Q Consensus 235 ~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
+++||+|||+++||+|+++||+++++||++|++++.++++| ++..|++|+++++.+++....
T Consensus 191 ~avLL~NHGvv~~G~tl~eA~~~~e~lE~aA~i~l~a~~~G--~~~~L~~e~~~~~~~~~~~~~---------------- 252 (274)
T PRK06208 191 KAVILQNHGLLTVGPSVDAAAWWFIALERACQTQLLAEAAG--PPQPIDHETARHTRSQVGSEY---------------- 252 (274)
T ss_pred CEEEECCCCceEeeCCHHHHHHHHHHHHHHHHHHHHHHhcC--CCcCCCHHHHHHHHHHhcCcc----------------
Confidence 89999999999999999999999999999999999999998 578899999999988874421
Q ss_pred HhhhhhhccchhhHHHHHHhhhhcC
Q psy14071 315 EKKEKRWRIGGMEFEALMRMLDNAK 339 (414)
Q Consensus 315 ~~~~~~w~~g~~~feal~R~ld~~g 339 (414)
.+.++|++|.|+|++.+
T Consensus 253 --------~~~~~~~~~~r~~~~~~ 269 (274)
T PRK06208 253 --------GGWFNFQPLYQRIVAEE 269 (274)
T ss_pred --------chhhcCHHHHHHHHhhC
Confidence 24568999999999987
No 7
>PRK07090 class II aldolase/adducin domain protein; Provisional
Probab=100.00 E-value=8.3e-48 Score=373.88 Aligned_cols=230 Identities=27% Similarity=0.364 Sum_probs=198.9
Q ss_pred CChhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCC
Q psy14071 78 YAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVN 157 (414)
Q Consensus 78 ~~~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~ 157 (414)
+++.|+.+|++|+.++|+++.+||+.+++||||+|+++ ++.|||||+|+.|++++++||++||++|++++|. .+|
T Consensus 24 ~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiS~R~~~-~~~~lItPsG~~~~~lt~~Div~vd~dG~~v~G~----~kP 98 (260)
T PRK07090 24 LKDSGWTLRQKLALTCRILFDAGHDSGLAGQITARAEA-PGTYYTQRLGLGFDEITASNLLLVDEDLNVLDGE----GMP 98 (260)
T ss_pred cCHHHHHHHHHHHHHHHHHHHcCCcccCCceEEEEeCC-CCEEEEeCCCCChhhCCHHHeEEECCCCCCCCCC----CCC
Confidence 46679999999999999999999999999999999975 3689999999999999999999999999999863 368
Q ss_pred CchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhCCeeeec-CCCCCCcHHHHHHHHHHhCCCCc
Q psy14071 158 TATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLGELSTHP-FTGYSRGDEEKERIVRNLGPNNK 235 (414)
Q Consensus 158 s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g~V~~~~-y~g~~~~~ee~~~la~~Lg~~~~ 235 (414)
++|+.+|.+||++||||+||||+||+|++|+|+++.++++..+.+. +++.+.+++ |.+...+.+++++++++|++ ++
T Consensus 99 s~E~~lH~~IYr~rPDv~AVvHtH~p~ata~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~ip~~~~~a~~va~~l~~-~~ 177 (260)
T PRK07090 99 NPANRFHSWIYRARPDVNCIIHTHPPHVAALSMLEVPLVVSHMDTCPLYDDCAFLKDWPGVPVGNEEGEIISAALGD-KR 177 (260)
T ss_pred ChhHHHHHHHHHhCCCCCEEEEeCCHHHHHHHhcCCCCCccchhHHhhccceeeccCcCCcCCChHHHHHHHHHhcc-CC
Confidence 9999999999999999999999999999999999888876666654 445555542 33333345789999999997 68
Q ss_pred EEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcCCCCCCCCCCCCCCCchhhH
Q psy14071 236 VLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLE 315 (414)
Q Consensus 236 vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (414)
++||+|||++++|+|+++||+++++||++|++|+.++++| ++..|+++.++++.+.+..+.
T Consensus 178 avLL~nHGvi~~G~~l~eA~~~~~~LE~~A~i~l~a~~~G--~~~~l~~e~~~~~~~~~~~~~----------------- 238 (260)
T PRK07090 178 AILLSHHGQLVAGKSIEEACVLALLIERAARLQLLAMAAG--PIKPIPPELAREAHDWISTPK----------------- 238 (260)
T ss_pred EEEECCCCCeEEcCCHHHHHHHHHHHHHHHHHHHHHHhCC--CCcCCCHHHHHHHHHhhcCcc-----------------
Confidence 9999999999999999999999999999999999999999 478899999998866542221
Q ss_pred hhhhhhccchhhHHHHHHhhhhcC
Q psy14071 316 KKEKRWRIGGMEFEALMRMLDNAK 339 (414)
Q Consensus 316 ~~~~~w~~g~~~feal~R~ld~~g 339 (414)
..++.|++|+|++++.+
T Consensus 239 -------~~~~~~~~~~~~~~~~~ 255 (260)
T PRK07090 239 -------RSAATFAYYARRALRRH 255 (260)
T ss_pred -------hhHhhHHHHHHHHHhhC
Confidence 13468999999999875
No 8
>PRK06833 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=1.1e-45 Score=349.66 Aligned_cols=202 Identities=19% Similarity=0.299 Sum_probs=184.9
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSV 163 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~i 163 (414)
+.|++|+.++|.++++||+.+++||||+|+++ ++.|||||+|+.|++++++||++||++|++++++ .+||+|+.+
T Consensus 5 ~~r~~i~~~~~~l~~~gl~~g~~GniS~r~~~-~~~~~ItpsG~~~~~l~~~div~vd~~g~~i~g~----~~ps~E~~l 79 (214)
T PRK06833 5 KEREEIVAYGKKLISSGLTKGTGGNISIFNRE-QGLMAITPSGIDYFEIKPEDIVIMDLDGKVVEGE----RKPSSELDM 79 (214)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCceEEEEeCC-CCEEEEcCCCCChhhCCHHHEEEEcCCCCCcCCC----CCCCccHHH
Confidence 46999999999999999999999999999986 4689999999999999999999999999999874 368999999
Q ss_pred HHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhC-CeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEecCC
Q psy14071 164 HAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLG-ELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNN 242 (414)
Q Consensus 164 H~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g-~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLrNH 242 (414)
|.+||++|||++||+|+||++++++|++...++|++++..++| +|++.+|..++ +.+.+++++++|++ ++++||+||
T Consensus 80 H~~iy~~rpdv~aVvH~H~~~a~a~s~~~~~lp~~~~~~~~~~~~i~~~~y~~~g-s~~la~~v~~~l~~-~~~vll~nH 157 (214)
T PRK06833 80 HLIFYRNREDINAIVHTHSPYATTLACLGWELPAVHYLIAVAGPNVRCAEYATFG-TKELAENAFEAMED-RRAVLLANH 157 (214)
T ss_pred HHHHHHhCCCCCEEEEeCcHHHHHHHHcCCCCCcchhHHHHHCCCeeeccCCCCC-hHHHHHHHHHHhCc-CCEEEECCC
Confidence 9999999999999999999999999999999988877666665 69999998776 46889999999997 689999999
Q ss_pred ceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q psy14071 243 GAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSS 294 (414)
Q Consensus 243 Gvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~ 294 (414)
|+++||+|+++||++++++|++|++++.|+++|. +..+++++++.+.+.+
T Consensus 158 Gv~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~--~~~l~~~~~~~~~~~~ 207 (214)
T PRK06833 158 GLLAGANNLKNAFNIAEEIEFCAEIYYQTKSIGE--PKLLPEDEMENMAEKF 207 (214)
T ss_pred CCEEEeCCHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999994 5789999998876654
No 9
>PRK08087 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=9.4e-45 Score=343.48 Aligned_cols=202 Identities=20% Similarity=0.320 Sum_probs=183.9
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchH
Q psy14071 82 EKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATF 161 (414)
Q Consensus 82 e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~ 161 (414)
+.++|++|+.++|.++++||+.+++||||+|++ +.|||||+|..|++++++||++||++|+++++. +|++|+
T Consensus 3 ~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~---~~~lItpsG~~~~~l~~~di~~vd~~G~~~~g~-----~ps~E~ 74 (215)
T PRK08087 3 RNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQ---DGMLITPTGIPYEKLTESHIVFVDGNGKHEEGK-----LPSSEW 74 (215)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEcC---CCEEEeCCCCChhhCCHHHEEEECCCCCCCCCC-----CCChhH
Confidence 557899999999999999999999999999996 469999999999999999999999999999762 689999
Q ss_pred HHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhC--CeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEe
Q psy14071 162 SVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLG--ELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFL 239 (414)
Q Consensus 162 ~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g--~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllL 239 (414)
.||.+||++|||++||+|+||++++++|++...++|+++..+.++ .||+.+|..+. +.++++.+++.|++ ++++||
T Consensus 75 ~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~ip~~~~~~~~~~~~~v~~~~y~~~g-s~~la~~~~~~l~~-~~~vLl 152 (215)
T PRK08087 75 RFHMAAYQTRPDANAVVHNHAVHCTAVSILNRPIPAIHYMIAAAGGNSIPCAPYATFG-TRELSEHVALALKN-RKATLL 152 (215)
T ss_pred HHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCCCCcHHHHHHHHcCCCceeecCCCCC-CHHHHHHHHHHhCc-CCEEEe
Confidence 999999999999999999999999999999988988877655443 59999988766 47899999999997 689999
Q ss_pred cCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q psy14071 240 SNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSS 294 (414)
Q Consensus 240 rNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~ 294 (414)
+|||+++||+|+++||++++++|++|++++.+++.|. ++..+|+|+++.+.+.+
T Consensus 153 ~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~a~~~g~-~~~~l~~e~~~~~~~~~ 206 (215)
T PRK08087 153 QHHGLIACEVNLEKALWLAHEVEVLAQLYLKTLAITD-PVPVLSDEEIAVVLEKF 206 (215)
T ss_pred cCCCCEEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999886 46779999998886654
No 10
>PRK08130 putative aldolase; Validated
Probab=100.00 E-value=1.2e-44 Score=342.09 Aligned_cols=201 Identities=22% Similarity=0.300 Sum_probs=182.6
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchH
Q psy14071 82 EKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATF 161 (414)
Q Consensus 82 e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~ 161 (414)
++++|++|++++|.++++||+.+++||||+|+++ +.|||||+|..|++++++||++||.+|+++++. +|++|+
T Consensus 3 ~~~~~~~l~~~~~~l~~~gl~~~~~GNiS~R~~~--~~~lItpsG~~~~~l~~~div~vd~~g~~~~g~-----~ps~E~ 75 (213)
T PRK08130 3 EQALREEIVRLGRSLFQRGYTVGSAGNISARLDD--GGWLVTPTGSCLGRLDPARLSKVDADGNWLSGD-----KPSKEV 75 (213)
T ss_pred HHHHHHHHHHHHHHHHHcCCCCCCCCeEEEEeCC--CCEEEeCCCCCccCCCHhHEEEECCCCCCCCCC-----CCChhH
Confidence 5679999999999999999999999999999974 579999999999999999999999999998862 589999
Q ss_pred HHHHHHHHhCCCccEEEecCChhHHHhhhccC-----CCccccHHHH-HhCCeeeecCCCCCCcHHHHHHHHHHhCCCCc
Q psy14071 162 SVHAAIHAARPDLKAIIHVATPAVVAVSSLKC-----GLLPLSRESV-VLGELSTHPFTGYSRGDEEKERIVRNLGPNNK 235 (414)
Q Consensus 162 ~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~-----~L~pi~qea~-~~g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~ 235 (414)
.+|.+||++|||++||+|+||++++|+|+.+. .++|+.++.. ++|+||++||..+++ .++++++++.|++ ++
T Consensus 76 ~~H~~iy~~rpdv~avvH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~~~g~i~v~~y~~~g~-~~la~~~~~~l~~-~~ 153 (213)
T PRK08130 76 PLHRAIYRNNPECGAVVHLHSTHLTALSCLGGLDPTNVLPPFTPYYVMRVGHVPLIPYYRPGD-PAIAEALAGLAAR-YR 153 (213)
T ss_pred HHHHHHHHhCCCCCEEEECCcHHHHHHHhcCccccccCCCCCChhhhhccCccceECCCCCCh-HHHHHHHHHHhcc-CC
Confidence 99999999999999999999999999999863 6778877765 679999999988874 7899999999997 68
Q ss_pred EEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q psy14071 236 VLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSS 294 (414)
Q Consensus 236 vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~ 294 (414)
++||+|||++++|+|+++||+++++||++|++++.+... .+..+++++++.+.+.+
T Consensus 154 ~vll~nHGvi~~G~s~~~A~~~~e~lE~~a~~~~~a~~~---~~~~l~~~~~~~~~~~~ 209 (213)
T PRK08130 154 AVLLANHGPVVWGSSLEAAVNATEELEETAKLILLLGGR---PPRYLTDEEIAELRSTF 209 (213)
T ss_pred EEEEcCCCCeeeCCCHHHHHHHHHHHHHHHHHHHHhcCC---CCCCCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999988644 26789999998876644
No 11
>PRK12348 sgaE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=1.4e-44 Score=345.18 Aligned_cols=204 Identities=16% Similarity=0.208 Sum_probs=181.3
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSV 163 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~i 163 (414)
++|++|+.++|.+++.||+.+++||||+|+++ ++.|||||+|+.|++++++||++||++|+++++. .+||+|+.|
T Consensus 3 ~~~~~l~~~~~~l~~~Gl~~g~~GNiS~r~~~-~~~~lItPsG~~~~~l~~~dlv~vd~dG~~ieg~----~kpssE~~l 77 (228)
T PRK12348 3 KLKQQVFEANMDLPRYGLVTFTWGNVSAIDRE-RGLVVIKPSGVAYETMKADDMVVVDMSGKVVEGE----YRPSSDTAT 77 (228)
T ss_pred HHHHHHHHHHHHHHHcCCCCcCCCeEEEEeCC-CCEEEEeCCCCChhhCCHHHEEEECCCCCCCCCC----CCCCccHHH
Confidence 48999999999999999999999999999975 4789999999999999999999999999999874 368999999
Q ss_pred HHHHHHhCCCccEEEecCChhHHHhhhccCCCcccc-HHHH-HhCCeeeecCCCCC-----CcHHHHHHHHHHhCCC---
Q psy14071 164 HAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLS-RESV-VLGELSTHPFTGYS-----RGDEEKERIVRNLGPN--- 233 (414)
Q Consensus 164 H~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~-qea~-~~g~V~~~~y~g~~-----~~~ee~~~la~~Lg~~--- 233 (414)
|.+||++|||++||||+||+|++|+|+++..++|++ ++++ ++|+||+++|.++. ...++++++++.|++.
T Consensus 78 H~~IYr~rpdv~aVvHtH~p~ata~a~~~~~ip~~~~~~~~~~~g~i~~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~~ 157 (228)
T PRK12348 78 HLELYRRYPSLGGIVHTHSTHATAWAQAGLAIPALGTTHADYFFGDIPCTRGLSEEEVQGEYELNTGKVIIETLGNAEPL 157 (228)
T ss_pred HHHHHHhCCCCCEEEecCcHHHHHHHHcCCCCCCccHHHHHHhCCCeeeecCCCchhhccchhhhHHHHHHHHHhhcCcc
Confidence 999999999999999999999999999998898874 5555 67899998874431 2346788999999863
Q ss_pred -CcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q psy14071 234 -NKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDS 293 (414)
Q Consensus 234 -~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~ 293 (414)
.+++||+|||++++|+|+++||++++++|++|++++.|+++|. ++..+|++.++.++..
T Consensus 158 ~~~avlL~nHG~v~~G~~l~eA~~~~~~lE~~a~~~~~a~~lg~-~~~~~~~~~~~~~~~~ 217 (228)
T PRK12348 158 HTPGIVVYQHGPFAWGKDAHDAVHNAVVMEEVAKMAWIARGINP-QLNHIDSYLMNKHFMR 217 (228)
T ss_pred cCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHHHhhCC-CCCCCCHHHHHHHHHH
Confidence 3699999999999999999999999999999999999999984 4889999998877554
No 12
>PRK05874 L-fuculose-phosphate aldolase; Validated
Probab=100.00 E-value=2e-44 Score=341.67 Aligned_cols=202 Identities=19% Similarity=0.209 Sum_probs=181.8
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSV 163 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~i 163 (414)
..|++|++++|.++++||+.+++||||+|+++ +.|||||+|..|++++++||++||.+|++++++ +..+||+|+.+
T Consensus 6 ~~r~~i~~~~~~l~~~Gl~~g~~GNiS~R~~~--~~~lITPsg~~~~~l~~~Div~vd~~G~~i~~~--~~~kPssE~~~ 81 (217)
T PRK05874 6 DPESAVLAAAKDMLRRGLVEGTAGNISARRSD--GNVVITPSSVDYAEMLLHDLVLVDAGGAVLHAK--DGRSPSTELNL 81 (217)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEcCC--CCEEEeCCCCChhhCCHHHEEEEcCCCCEecCC--CCCCCchhHHH
Confidence 46799999999999999999999999999974 579999999999999999999999999999752 22479999999
Q ss_pred HHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHH-HHHh-CCeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEecC
Q psy14071 164 HAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRE-SVVL-GELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSN 241 (414)
Q Consensus 164 H~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qe-a~~~-g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLrN 241 (414)
|.+||++|||++||+|+||++++++|+....++++..+ +.++ |++++.+|..+++ .+++++++++|++ ++++||+|
T Consensus 82 H~~iY~~rpdv~aViHtH~~~a~a~s~~~~~l~~~~~~~~~~~~~~v~~~~y~~~gs-~ela~~v~~~l~~-~~~vlL~n 159 (217)
T PRK05874 82 HLACYRAFDDIGSVIHSHPVWATMFAVAHEPIPACIDEFAIYCGGDVRCTEYAASGT-PEVGRNAVRALEG-RAAALIAN 159 (217)
T ss_pred HHHHHHhCCCCCEEEECCcHHHHHHHHcCCCCCcchhHHHHHcCCceeeecCCCCCc-HHHHHHHHHHhCc-CCEEEEcC
Confidence 99999999999999999999999999998888765443 4454 5799999998874 7999999999997 68999999
Q ss_pred CceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q psy14071 242 NGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDS 293 (414)
Q Consensus 242 HGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~ 293 (414)
||+++||+|+++||++++.+|++|++++.+++.|. +..|++|++++....
T Consensus 160 HGv~~~G~~l~~A~~~~e~lE~~a~~~~~a~~~G~--~~~l~~e~~~~~~~~ 209 (217)
T PRK05874 160 HGLVAVGPRPDQVLRVTALVERTAQIVWGARALGG--PVPIPEDVCRNFTGV 209 (217)
T ss_pred CCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCC--CcCCCHHHHHHhhcc
Confidence 99999999999999999999999999999999994 588999998875443
No 13
>PRK06557 L-ribulose-5-phosphate 4-epimerase; Validated
Probab=100.00 E-value=4e-44 Score=340.34 Aligned_cols=204 Identities=19% Similarity=0.295 Sum_probs=184.0
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchH
Q psy14071 82 EKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATF 161 (414)
Q Consensus 82 e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~ 161 (414)
.+++|++|+.++|.++++||+.+++||||+|+++ ++.|||||+|..|++++++||++||++|++++++ .+|++|+
T Consensus 8 ~~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~-~~~~~ItpsG~~~~~l~~~div~vd~~G~~~~g~----~~ps~E~ 82 (221)
T PRK06557 8 VEKLREEVCKLHLELPKYGLVVWTSGNVSARDPG-TDLVVIKPSGVSYDDLTPEDMVVVDLDGNVVEGD----LKPSSDT 82 (221)
T ss_pred HHHHHHHHHHHHHHHHHCCCccccCceEEEEeCC-CCEEEEeCCCCChhhCCHHHEEEEcCCCCCcCCC----CCCCccH
Confidence 5678999999999999999999999999999975 4789999999999999999999999999999873 3689999
Q ss_pred HHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccc-cHHHH-HhCCeeeecCCCCCCcHHHHHHHHHHh--CCCCcEE
Q psy14071 162 SVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPL-SRESV-VLGELSTHPFTGYSRGDEEKERIVRNL--GPNNKVL 237 (414)
Q Consensus 162 ~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi-~qea~-~~g~V~~~~y~g~~~~~ee~~~la~~L--g~~~~vl 237 (414)
.+|.+||++||||+||+|+||++++++|+++..+++. .+.+. +.++||+++|..+++ .++++++++.| ++ ++++
T Consensus 83 ~lH~~iy~~~pdv~aVvH~H~~~~~a~a~~~~~~p~~~~~~~~~~~~~ip~~~y~~~g~-~ela~~i~~~l~~~~-~~~v 160 (221)
T PRK06557 83 ASHLYVYRHMPDVGGVVHTHSTYATAWAARGEPIPCVLTAMADEFGGPIPVGPFALIGD-EAIGKGIVETLKGGR-SPAV 160 (221)
T ss_pred HHHHHHHHhCCCCCEEEeeCcHHHHHHHHhCCCCChhHHHHHHHhCCCeeccCCcCCCc-HHHHHHHHHHhCcCC-CCEE
Confidence 9999999999999999999999999999998887653 34454 456899999998874 68999999999 65 7899
Q ss_pred EecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q psy14071 238 FLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSS 294 (414)
Q Consensus 238 lLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~ 294 (414)
||+|||+++||+|+++||+++++||++|++++.|+++|. +..+++++++++++.+
T Consensus 161 ll~nHG~~~~G~~~~eA~~~~e~lE~~a~~~~~a~~~G~--~~~l~~~~~~~~~~~~ 215 (221)
T PRK06557 161 LMQNHGVFTIGKDAEDAVKAAVMVEEVARTVHIARQLGE--PIPIPQEEIDRLYDRY 215 (221)
T ss_pred EECCCCceEEcCCHHHHHHHHHHHHHHHHHHHHHHhcCC--CCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999994 4679999998887654
No 14
>cd00398 Aldolase_II Class II Aldolase and Adducin head (N-terminal) domain. Aldolases are ubiquitous enzymes catalyzing central steps of carbohydrate metabolism. Based on enzymatic mechanisms, this superfamily has been divided into two distinct classes (Class I and II). Class II enzymes are further divided into two sub-classes A and B. This family includes class II A aldolases and adducins which has not been ascribed any enzymatic function. Members of this class are primarily bacterial and eukaryotic in origin and include L-fuculose-1-phosphate, L-rhamnulose-1-phosphate aldolases and L-ribulose-5-phosphate 4-epimerases. They all share the ability to promote carbon-carbon bond cleavage and stabilize enolate intermediates using divalent cations.
Probab=100.00 E-value=6.7e-44 Score=335.87 Aligned_cols=200 Identities=33% Similarity=0.495 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHHH
Q psy14071 85 LRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVH 164 (414)
Q Consensus 85 ~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~iH 164 (414)
.|++|+.++|.++.+||+++++||||+|++++ +.|||||+|..|++++++||++||++|+++++ .+||+|+.+|
T Consensus 3 ~~~~l~~~~r~l~~~Gl~~~~~GniS~R~~~~-~~~~itpsG~~~~~l~~~dlv~vd~~g~~~~g-----~~ps~E~~lH 76 (209)
T cd00398 3 LKRKIIAACLLLDLYGWVTGTGGNVSARDRDR-GYFLITPSGVDYEEMTASDLVVVDAQGKVVEG-----KKPSSETPLH 76 (209)
T ss_pred HHHHHHHHHHHHHHcCCcccCCceEEEEeCCC-CEEEEeCCCCChHHCCHhhEEEEcCCCCCcCC-----CCCCccHHHH
Confidence 68899999999999999999999999999753 68999999999999999999999999999984 3689999999
Q ss_pred HHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHH-H-H-hCCeeeecCCCCC-CcHHHHHHHHHHhCCCCcEEEec
Q psy14071 165 AAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRES-V-V-LGELSTHPFTGYS-RGDEEKERIVRNLGPNNKVLFLS 240 (414)
Q Consensus 165 ~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea-~-~-~g~V~~~~y~g~~-~~~ee~~~la~~Lg~~~~vllLr 240 (414)
.+||++||||+||+|+||++++++|+++.+..|+.++. . + .++||++||..+. .+.+.++.+++.|++ .+++||+
T Consensus 77 ~~iy~~rpdv~aViHtH~~~~~a~s~~~~~~~p~~~~~~~~~~~~~ip~~~~~~~~~~~~~la~~~~~~l~~-~~~vll~ 155 (209)
T cd00398 77 LALYRARPDIGCIVHTHSTHATAVSQLKEGLIPAGHTACAVYFTGDIPCTPYMTPETGEDEIGTQRALGFPN-SKAVLLR 155 (209)
T ss_pred HHHHHhCCCCCEEEEeCCHHHHHHHHhCCCCCCcchHHHHHHcCCCeeecCCcCCCccHHHHHHHHhcCCCc-CCEEEEc
Confidence 99999999999999999999999999987555665443 3 3 4789999999883 246778888888876 6899999
Q ss_pred CCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q psy14071 241 NNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYD 292 (414)
Q Consensus 241 NHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~ 292 (414)
|||+++||+|+++||++++++|++|++|+.++++|. +...+|+|.++++..
T Consensus 156 nHG~~~~G~~~~~A~~~~~~lE~~a~~~~~a~~~g~-~~~~l~~~~~~~~~~ 206 (209)
T cd00398 156 NHGLFAWGPTLDEAFHLAVVLEVAAEIQLKALSMGG-QLPPISLELLNKEYL 206 (209)
T ss_pred CCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCHHHHHHHHh
Confidence 999999999999999999999999999999999985 466899999887654
No 15
>TIGR00760 araD L-ribulose-5-phosphate 4-epimerase. The homolog to this family from Mycobacterium smegmatis is flanked by putative araB and araA genes, consistent with it also being araD.
Probab=100.00 E-value=1.3e-43 Score=339.05 Aligned_cols=204 Identities=16% Similarity=0.174 Sum_probs=182.3
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCC-CCcccCCCCCCCCCCchHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMR-GDIIEPGTTNFGVNTATFS 162 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~d-G~vv~~~~~~~~~~s~e~~ 162 (414)
++|++++.++|.+...||+.+++||||+|+++ ++.|||||+|..|++++++||++||++ |+++++. .+||+|+.
T Consensus 4 ~~~~ei~~~~~~l~~~gl~~~~~GNiS~R~~~-~~~~lITPsG~~~~~l~~~div~vdl~~G~~i~g~----~kpS~E~~ 78 (231)
T TIGR00760 4 QLKKEVLEANLALPKHQLVTFTWGNVSAIDRE-RGLVVIKPSGVEYDVMTADDMVVVDLETGNVVEGS----KKPSSDTP 78 (231)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCeEEEEecC-CCEEEEeCCCCChhhCCHHHEEEEcCcCCccCCCC----CCCCccHH
Confidence 48999999999999999999999999999875 368999999999999999999999999 9999874 36899999
Q ss_pred HHHHHHHhCCCccEEEecCChhHHHhhhccCCCcccc-HHHH-HhCCeeeecCCCC-----CCcHHHHHHHHHHhCCC--
Q psy14071 163 VHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLS-RESV-VLGELSTHPFTGY-----SRGDEEKERIVRNLGPN-- 233 (414)
Q Consensus 163 iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~-qea~-~~g~V~~~~y~g~-----~~~~ee~~~la~~Lg~~-- 233 (414)
||.+||++||||+||||+||+|+++||+++..++|++ ++++ ++|+||+++|.++ ..+.+++++++++|++.
T Consensus 79 lH~~IYr~rpdv~aVvHtH~p~ata~a~~~~~lp~~~~~~~~~~~g~ip~~~~~~~~~~~~~~~~~~~~~la~~l~~~~~ 158 (231)
T TIGR00760 79 THLALYRAFPSIGGIVHTHSRHATIWAQAGKDIPALGTTHADYFYGTIPCTRPMTDEEINGEYELETGKVIVETFEKRGI 158 (231)
T ss_pred HHHHHHHhCCCCCEEEecCcHHHHHHHHcCCCCCCcchHHHHHhCCceeeecCCCcccccccchHhHHHHHHHHHhhccC
Confidence 9999999999999999999999999999998898886 5555 6678999876531 12457899999999862
Q ss_pred ----CcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q psy14071 234 ----NKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDS 293 (414)
Q Consensus 234 ----~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~ 293 (414)
.+++||+|||++++|+|+++||++++.||++|++++.|++.|. ++.++++|+++.++..
T Consensus 159 ~~~~~~avlL~nHGvv~~G~~l~eA~~~~e~lE~~Ak~~~~a~~~g~-~~~~~~~~~~~~~~~~ 221 (231)
T TIGR00760 159 DPAQIPGVLVHSHGPFAWGKDAANAVHNAVVLEEVAYMALFSRQLNP-QLPPMQQTLLDKHYLR 221 (231)
T ss_pred CcccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCHHHHHHHHHH
Confidence 2799999999999999999999999999999999999999995 4899999999887664
No 16
>PRK08193 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=1.5e-43 Score=338.68 Aligned_cols=204 Identities=17% Similarity=0.207 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSV 163 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~i 163 (414)
++|++|+.++|.++.+||+.+++||||+|+++ ++.|||||+|..|++++++||++||++|+++++. .+||+|+.|
T Consensus 4 ~~r~~i~~~~~~l~~~gl~~g~~GNiS~r~~~-~~~~~ItpsG~~~~~l~~~Div~vd~dG~~~~g~----~kPSsE~~~ 78 (231)
T PRK08193 4 DLKQEVLEANLALPKHGLVTFTWGNVSAIDRE-RGLFVIKPSGVDYDKMTAEDMVVVDLEGNVVEGK----LKPSSDTPT 78 (231)
T ss_pred HHHHHHHHHHHHHHHcCCCCCCCCeEEEEecC-CCEEEEeCCCCChhhCChHHEEEECCCCCCCCCC----CCcCccHHH
Confidence 58999999999999999999999999999875 3689999999999999999999999999999863 478999999
Q ss_pred HHHHHHhCCCccEEEecCChhHHHhhhccCCCcccc-HHHH-HhCCeeeecCCCCC-----CcHHHHHHHHHHhCCC---
Q psy14071 164 HAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLS-RESV-VLGELSTHPFTGYS-----RGDEEKERIVRNLGPN--- 233 (414)
Q Consensus 164 H~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~-qea~-~~g~V~~~~y~g~~-----~~~ee~~~la~~Lg~~--- 233 (414)
|.+||++||||+||+|+||++++++|+++..++++. +.+. ++|+||+++|.+.. ...++++++++.|++.
T Consensus 79 H~~IYr~rpdv~AVvHtHsp~ata~s~~~~~l~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~~~~~ia~~l~~~~~~ 158 (231)
T PRK08193 79 HLVLYKAFPEIGGIVHTHSRHATAWAQAGRDIPALGTTHADYFYGDIPCTRKMTDEEINGEYEWETGKVIVETFEKRGID 158 (231)
T ss_pred HHHHHHhCCCCcEEEecCcHHHHHHHhcCCCCCcchHHHHHHhCCCcceecCCCcccccccchhhHHHHHHHHHhhccCC
Confidence 999999999999999999999999999988887774 3344 66789999986552 2357899999999852
Q ss_pred ---CcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q psy14071 234 ---NKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDS 293 (414)
Q Consensus 234 ---~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~ 293 (414)
.+++||+|||+++||+|+++||++++.||++|++++.+++.|. ++..+++|+++.++..
T Consensus 159 ~~~~~avLl~nHG~v~~G~~l~eA~~~~e~lE~~a~~~~~a~~lg~-~~~~l~~e~~~~~~~~ 220 (231)
T PRK08193 159 PAAVPGVLVHSHGPFTWGKDAEDAVHNAVVLEEVAKMAYFTRQLNP-QLPDMQQTLLDKHYLR 220 (231)
T ss_pred cccCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCHHHHHHHHHH
Confidence 3699999999999999999999999999999999999999995 4899999999877553
No 17
>PRK13145 araD L-ribulose-5-phosphate 4-epimerase; Provisional
Probab=100.00 E-value=1.2e-42 Score=332.94 Aligned_cols=204 Identities=15% Similarity=0.219 Sum_probs=181.0
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSV 163 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~i 163 (414)
++|++|+.++|.++.+||+.+++||||+|+++ ++.|||||+|+.|++++++||++||++|+++++. .+||+|+.|
T Consensus 5 ~~r~~l~~~~r~l~~~gl~~g~~GNiS~r~~~-~~~~~ItPsg~~~~~l~~~div~vd~~G~~~eG~----~kPSsE~~l 79 (234)
T PRK13145 5 EMRERVCAANKSLPKHGLVKFTWGNVSEVCRE-LGRIVIKPSGVDYDELTPENMVVTDLDGNVVEGD----LNPSSDLPT 79 (234)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCEEEEEecC-CCEEEEeCCCCCcccCCHHHEEEECCCCCCcCCC----CCccccHHH
Confidence 58999999999999999999999999999874 4689999999999999999999999999999874 368999999
Q ss_pred HHHHHHhCCCccEEEecCChhHHHhhhccCCCcccc-HHHH-HhCCeeeecCCCCC-----CcHHHHHHHHHHhCCC---
Q psy14071 164 HAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLS-RESV-VLGELSTHPFTGYS-----RGDEEKERIVRNLGPN--- 233 (414)
Q Consensus 164 H~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~-qea~-~~g~V~~~~y~g~~-----~~~ee~~~la~~Lg~~--- 233 (414)
|.+||++||||+||||+||+++++||+++..+++++ +.+. ++|+||+.+|..+. .+.+++++++++|++.
T Consensus 80 H~~IY~~rpdv~AVvHtH~~~ata~a~~~~~lp~~~~~~~~~~~g~vp~~~~~~~~~~~~~~~~~~~~~va~~l~~~~~~ 159 (234)
T PRK13145 80 HVELYKAWPEVGGIVHTHSTEAVGWAQAGRDIPFYGTTHADYFYGPIPCARSLTKDEVNGAYEKETGSVIIEEFEKRGLD 159 (234)
T ss_pred HHHHHHhCCCCCEEEeCCCHHHHHHHHcCCCCCCchhHHHHHhCCCcccccccCccccccccchhhHHHHHHHHhhhccc
Confidence 999999999999999999999999999988887653 4444 66789998775432 2457788999999752
Q ss_pred ---CcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q psy14071 234 ---NKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDS 293 (414)
Q Consensus 234 ---~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~ 293 (414)
.+++||+|||++++|+|+++||++++++|++|++++.|+++|. ++..+|++.++.++..
T Consensus 160 ~~~~~avLL~nHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~-~~~~~~~~~~~~~~~~ 221 (234)
T PRK13145 160 PMAVPGIVVRNHGPFTWGKNPEQAVYHSVVLEEVAKMNRLTEQINP-RVEPAPQYIMDKHYLR 221 (234)
T ss_pred cccCCEEEEcCCCeeEecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999984 5899999999887664
No 18
>PRK12347 sgbE L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=1.9e-42 Score=331.11 Aligned_cols=204 Identities=15% Similarity=0.218 Sum_probs=181.2
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeC-CCCcccCCCCCCCCCCchH
Q psy14071 83 KILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDM-RGDIIEPGTTNFGVNTATF 161 (414)
Q Consensus 83 ~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~-dG~vv~~~~~~~~~~s~e~ 161 (414)
.++|++++.++|.+...||+.+++||||+|+++ ++.|||||+|+.|++++++||++||+ +|++++++ .+||+|+
T Consensus 3 ~~~~~~iv~~~~~l~~~gl~~~t~GNiS~R~~~-~~~~~ItPsG~~~~~l~~~div~vd~~~G~~i~g~----~kpS~E~ 77 (231)
T PRK12347 3 EQLKADVLAANLALPAHHLVTFTWGNVSAVDET-RQLMVIKPSGVEYDVMTADDMVVVEIASGKVVEGS----KKPSSDT 77 (231)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCceEEEEecC-CCeEEEeCCCCCcccCCHHHEEEEEcCCCcCCCCC----CCcCccH
Confidence 357999999999999999999999999999975 36899999999999999999999999 99999874 3689999
Q ss_pred HHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccc-cHHHH-HhCCeeeecCCCCC-----CcHHHHHHHHHHhCC--
Q psy14071 162 SVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPL-SRESV-VLGELSTHPFTGYS-----RGDEEKERIVRNLGP-- 232 (414)
Q Consensus 162 ~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi-~qea~-~~g~V~~~~y~g~~-----~~~ee~~~la~~Lg~-- 232 (414)
.||.+||++||||+||||+||++++++|+++..++|+ ++++. ++|+||+.+|..+. ...+++++++++|+.
T Consensus 78 ~lH~~iYr~rpdv~aViHtHs~~ata~a~~~~~lp~~~~~~~~~~~g~Ip~~~~~~~~~~a~~~~~e~~~~va~~l~~~~ 157 (231)
T PRK12347 78 PTHLALYRRYPEIGGIVHTHSRHATIWSQAGLDLPAWGTTHADYFYGAIPCTRLMTAEEINGEYEYQTGEVIIETFEERG 157 (231)
T ss_pred HHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCCCCCcchHHHHHhCCceeeecccCchhcccccchhhHHHHHHHHhhcc
Confidence 9999999999999999999999999999999899887 45655 67899998765421 134788999999973
Q ss_pred ----CCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHH
Q psy14071 233 ----NNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYD 292 (414)
Q Consensus 233 ----~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~ 292 (414)
+.+++||+|||++++|+|+++||+++++||++|++++.|...|. ++..++++..+..+.
T Consensus 158 ~~~~~~~avLL~NHG~v~~G~~l~eA~~~~e~lE~~A~~~~~a~~lg~-~~~~~~~~~~~~~~~ 220 (231)
T PRK12347 158 ISPAQIPAVLVHSHGPFAWGKNAADAVHNAVVLEECAYMGLFSRQLAP-QLPAMQNELLDKHYL 220 (231)
T ss_pred ccccCCCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCHHHHHHHHH
Confidence 35899999999999999999999999999999999999999984 588999998887654
No 19
>TIGR01086 fucA L-fuculose phosphate aldolase. Members of this family are L-fuculose phosphate aldolase from various Proteobacteria, encoded in fucose utilization operons. Homologs in other bacteria given similar annotation may share extensive sequence similarity but are not experimenally characterized and are not found in apparent fucose utilization operons; we consider their annotation as L-fuculose phosphate aldolase to be tenuous. This model has been narrowed in scope from the previous version.
Probab=100.00 E-value=1.6e-42 Score=328.01 Aligned_cols=202 Identities=16% Similarity=0.163 Sum_probs=181.7
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchH
Q psy14071 82 EKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATF 161 (414)
Q Consensus 82 e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~ 161 (414)
|+++|++|++++|.++.+||+.+++||||+|++ +.|||||+|+.|++++++||++||.||+++++. +||+|+
T Consensus 2 ~~~~~~~i~~~~~~l~~~Gl~~g~~GNiS~R~~---~~~lItPsG~~~~~l~~~div~vd~~G~~~~g~-----kpsse~ 73 (214)
T TIGR01086 2 RRELSQRIIDTCLEMTTLGLNQGTAGNVSVRRY---QGMLITPTGGPYYEKLTESIVYVIDGGGKEEEK-----LPSSEW 73 (214)
T ss_pred hHHHHHHHHHHHHHHHHcCCCCCCcceEEEECC---CCEEEECCCCCcccCCHHHEEEEcCCCCCCCCC-----CCChhH
Confidence 578999999999999999999999999999985 349999999999999999999999999999862 689999
Q ss_pred HHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhC-CeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEe
Q psy14071 162 SVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLG-ELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFL 239 (414)
Q Consensus 162 ~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g-~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllL 239 (414)
.+|..||++|||++||||+|+++++++++++++++|++++.+ +.+ .||+.+|..++. .++++++++.+++ ++++||
T Consensus 74 ~~H~~iy~~rpdv~avvH~H~~~~~~~~~~~~~lp~~~~~~~~~~~~~i~~v~y~~~gs-~~la~~v~~~~~~-~~~vLL 151 (214)
T TIGR01086 74 WFHLMAYYQRRPDNAVVHNHHIVCATASILLKRIPAIHYMVAASGGGNIPCVPYATFGS-TKLASEVVAGILK-SKAILL 151 (214)
T ss_pred HHHHHHHHhCCCCCEEEeCCCHHHHHHHHcCCCCCcchHHHHHhcCCCccccCCCCCCh-HHHHHHHHHHhhh-CCEEeh
Confidence 999999999999999999999999999999888988888766 433 688888887764 6889999999997 689999
Q ss_pred cCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q psy14071 240 SNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSS 294 (414)
Q Consensus 240 rNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~ 294 (414)
+|||+++||+|+++||++++.+|++|++++.++..|+ .+..|+++++.++.+.+
T Consensus 152 ~nHG~~~~G~~l~eA~~~~e~lE~~a~~~~~a~~~g~-~~~~l~~~~~~~~~~~~ 205 (214)
T TIGR01086 152 LHHGLIIACENLLKALWLAAEVEVLAAQYLKTLLAIT-DPPPLLSDEMIVVLLKF 205 (214)
T ss_pred hcCCCEEecCCHHHHHHHHHHHHHHHHHHHHHHHcCC-CCccCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999988775 36778888887765543
No 20
>PRK05834 hypothetical protein; Provisional
Probab=100.00 E-value=1.5e-42 Score=323.64 Aligned_cols=185 Identities=16% Similarity=0.157 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSV 163 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~i 163 (414)
.+|++|++++|.+++.||+.+++||||+|+++ +.|||||+|..|++++++||++| .+|+++++ .+||+|+.+
T Consensus 5 ~~~~el~~~~~~l~~~gl~~gt~GNiS~R~~~--~~~lITPsG~~~~~l~~ediv~v-~~g~~~~~-----~kPSsE~~~ 76 (194)
T PRK05834 5 NLIDELKSISLSMFRKNFFGLYHGSISAKIEA--NQFIINKQNAIFDELDENSLIVL-YDKKDYRW-----KEASIDSPI 76 (194)
T ss_pred HHHHHHHHHHHHHHHCCCcccccceEEEEeCC--CcEEEeCCCCccccCCHHHeEEE-eCCCccCC-----CCCCccHHH
Confidence 48999999999999999999999999999963 57999999999999999999999 99987764 379999999
Q ss_pred HHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhCCeeeecCCCCCCcH-HHHHHHHHHhCCC-CcEEEec
Q psy14071 164 HAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLGELSTHPFTGYSRGD-EEKERIVRNLGPN-NKVLFLS 240 (414)
Q Consensus 164 H~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g~V~~~~y~g~~~~~-ee~~~la~~Lg~~-~~vllLr 240 (414)
|.+||+.|||++||||+||+|++++|+++..++|++++.. ++|+||+.+|..+.... +.++++++.|++. .+++||+
T Consensus 77 H~~IY~~rpdv~AVvHtHs~~ata~s~~~~~i~~~~~~~~~~~g~ipv~~~~~~~~~~~~la~~v~~~l~~~~~~avLL~ 156 (194)
T PRK05834 77 HASIYKNISEAKFIAYAMPPYTTAYSLRHNKILPRDYFGYRSLGEISIYDPKDFDDWYERADTEILRYLQEKNKNFVVIK 156 (194)
T ss_pred HHHHHhcCCCCCEEEEeCCHHHHHHHhcCCCcCccChhHHhhCCeeeecCccccchHHHhHHHHHHHHHhhcCCCEEEEc
Confidence 9999999999999999999999999999999999998876 77899999987766422 3478899999862 2499999
Q ss_pred CCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14071 241 NNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGL 276 (414)
Q Consensus 241 NHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~ 276 (414)
|||+++||+|+++||++++.+|++|++++.+.++|+
T Consensus 157 nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~~~~ 192 (194)
T PRK05834 157 GYGVYAYARDIYELAKKIAILENSCKILRLSDLMDR 192 (194)
T ss_pred CCcceEECCCHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 999999999999999999999999999999998884
No 21
>PF00596 Aldolase_II: Class II Aldolase and Adducin N-terminal domain; InterPro: IPR001303 This entry represents the alpha/beta/alpha domain found in class II aldolases and adducin, usually at the N terminus. These proteins form part of a family that includes: rhamnulose-1-phosphate aldolase (4.1.2.19 from EC), L-fuculose phosphate aldolase (4.1.2.17 from EC) [, ] that is involved in the third step in fucose metabolism, L-ribulose- 5-phosphate 4-epimerase (5.1.3.4 from EC) involved in the third step of L-arabinose catabolism, a probable sugar isomerase SgbE, hypothetical proteins and the metazoan adducins which have not been ascribed any enzymatic function but which play a role in cell membrane cytoskeleton organisation. Adducins are members of the Ig superfamily and encode cell surface sialoglycoproteins expressed by cytokine-activated endothelium. This type I membrane protein mediates leukocyte-endothelial cell adhesion and signal transduction, and may play a role in the development of artherosclerosis and rheumatoid arthritis. Adducin is a cell-membrane skeletal protein that was first purified from human erythrocytes and subsequently isolated from bovine brain membranes. Isoforms of this protein have been detected in lung, kidney, testes and liver. Erythrocyte adducin is a 200kDa heterodimer protein, composed of alpha and beta subunits, present at about 30,000 copies per cell. It binds with high affinity to Ca(2+)/calmodulin and is a substrate for protein kinases A and C. Both alpha-adducin and beta-adducin show alternative splicing. Thus, there may be several different heterodimeric or homodimeric forms of adducin, each with a different functional specificity. It is thought to play a role in assembly of the spectrin-actin lattice that underlies the plasma membrane []. Missense mutations in both the alpha- and beta-adducin genes that alter amino acids that are normally phosphorylated have been associated with the regulation of blood pressure in the Milan hypertensive strain (MHS) of rats. Gamma adducin was isolated from human foetal brain []. It shows a high degree of similarity to the alpha and beta adducins.; GO: 0046872 metal ion binding; PDB: 2V9N_B 1GT7_B 2V9O_E 2V9M_B 2V9F_A 2UYV_A 1OJR_A 2V9G_C 2V29_B 2V9I_A ....
Probab=100.00 E-value=3.2e-42 Score=317.42 Aligned_cols=179 Identities=34% Similarity=0.524 Sum_probs=160.5
Q ss_pred HHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCC-CCcccCCCCCCCCCCchHHHHH
Q psy14071 87 CKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMR-GDIIEPGTTNFGVNTATFSVHA 165 (414)
Q Consensus 87 ~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~d-G~vv~~~~~~~~~~s~e~~iH~ 165 (414)
|+|+.++|+++++||+++.+||||+|++ ++.|||||+|..+++++++||++||++ |+++++. ++...|++|+.+|.
T Consensus 1 ~~l~~~~r~l~~~g~~~~~~GniS~R~~--~~~~lit~sg~~~~~l~~~d~~~v~~~~g~~l~g~-~~~~~ps~e~~lH~ 77 (184)
T PF00596_consen 1 QELAEACRRLYERGLVDGTGGNISVRVP--GDRFLITPSGVDKDELTPEDIVVVDLDDGNILEGD-EGGGKPSSETPLHA 77 (184)
T ss_dssp HHHHHHHHHHHHTTSSCTTBEEEEEEEC--TTEEEEEBTTS-GGGCTGGGEEEEETTTSEEEEES-TTSSCBCTTHHHHH
T ss_pred CHHHHHHHHHHHCCCcccCCCeEEEEec--CCCEEEcCCCCChhhCChhhceEEeccccceeecc-CCCCCCCHhHHHHh
Confidence 6899999999999999999999999998 489999999999999999999999998 9999651 12356899999999
Q ss_pred HHHHhCCCccEEEecCChhHHHhhhc-cCCCccccHHHH-Hh--CCeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEecC
Q psy14071 166 AIHAARPDLKAIIHVATPAVVAVSSL-KCGLLPLSRESV-VL--GELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSN 241 (414)
Q Consensus 166 aIy~arPDv~aViH~H~~~~~A~S~~-~~~L~pi~qea~-~~--g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLrN 241 (414)
+||++|||++||+|+||++++++|++ +++++|++++++ ++ +.||++||..+.. .++++++++.|+.+++++||+|
T Consensus 78 ~iy~~rpdv~aViH~H~~~~~a~s~~~~~~l~~~~~~~~~~~~~~~v~~~~~~~~~~-~~l~~~i~~~l~~~~~~vll~n 156 (184)
T PF00596_consen 78 AIYRARPDVNAVIHTHPPYATALSCLAGEPLPPITQEAARFYFGGEVPVVPYAPPGS-EELAEAIAEALGEDRKAVLLRN 156 (184)
T ss_dssp HHHHHCTTSSEEEEE--HHHHHHHTSSTCCCCSSSHHHHHTHTSSCEEEE-THSTTC-HHHHHHHHHHHTCTSSEEEETT
T ss_pred HHHcCCCCCCEEEecChHHHHhHHhhhhcccccchhhHHhhhcCccceeeccccccc-hhhhhhhhhhhcCCceEEeecC
Confidence 99999999999999999999999999 899999999987 34 6899999988764 6789999999993379999999
Q ss_pred CceEEEcCCHHHHHHHHHHHHHHHHHHH
Q psy14071 242 NGAVCCGETVEEAFYNVYNLVAACEAQL 269 (414)
Q Consensus 242 HGvl~~G~tv~eAf~~~~~lE~aceiql 269 (414)
||++++|+|+++||.+++.||++|++|+
T Consensus 157 HG~~~~G~s~~~A~~~~~~lE~~a~~~l 184 (184)
T PF00596_consen 157 HGVVVWGKSLEEAFYRAEYLERAAEIQL 184 (184)
T ss_dssp TEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999986
No 22
>COG0235 AraD Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.7e-42 Score=328.99 Aligned_cols=203 Identities=30% Similarity=0.440 Sum_probs=177.0
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCc
Q psy14071 80 KGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTA 159 (414)
Q Consensus 80 ~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~ 159 (414)
..+++.|++|++++|.+..+||+++++||||+|+++.+. |+|||+|+.|+++|++||++||+||++++++ .+||+
T Consensus 3 ~~~~~~~~~l~~~~~~l~~~g~~~~t~GniS~r~~~~~~-~~ItpsG~~~~~lt~~dlv~vd~~G~~~~g~----~~pSs 77 (219)
T COG0235 3 MMLEKLRQELAKAARLLARRGLVEGTAGNISVRLPEGGL-FLITPSGVPFGELTADDLVVVDLDGEVVEGG----KKPSS 77 (219)
T ss_pred hhHHHHHHHHHHHHHHHHHcCCCCcCCceEEEEcCCCce-EEEeCCCCccccCcHHHeEEEeCCCcEecCC----CCCch
Confidence 467889999999999999999999999999999986433 9999999999999999999999999999872 47999
Q ss_pred hHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhC-CeeeecCCCCCCcHHHHHHHHHHhCCCCcEE
Q psy14071 160 TFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLG-ELSTHPFTGYSRGDEEKERIVRNLGPNNKVL 237 (414)
Q Consensus 160 e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g-~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vl 237 (414)
|+.+|.+||++|||++||+|+||++++++|++++.|+|++++.+ ++| .||+.+|.++.. .+++..++..+.. ...+
T Consensus 78 e~~~H~~iY~~rpd~~aVvHtHs~~a~als~~~~~l~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~~~-~~~~ 155 (219)
T COG0235 78 ETPIHLAIYRARPDAGAVVHTHSPYATALSTLGEPLPPLGTEHLKYFGGGIPCAPYAGPGS-VELAEALAEAADL-AEAV 155 (219)
T ss_pred hHHHHHHHHHhCCCCCEEEecCcHHHHHHHHhcCCCCCCCHHHHHHcCCCcccccCCCCCc-hhhHHHHHHHHHH-HHHH
Confidence 99999999999999999999999999999999999999999976 665 499999999864 4556666555543 2334
Q ss_pred --EecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHH
Q psy14071 238 --FLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEI 290 (414)
Q Consensus 238 --lLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~ 290 (414)
||+|||+++||+|+++|+++++.||++|++|+.++++|.+ +..++++...+.
T Consensus 156 ~~ll~~HG~~~~G~~l~eA~~~~~~lE~~a~~~~~~~~~~~~-~~~~~~~~~~~~ 209 (219)
T COG0235 156 LKLLRNHGVVAWGKTLAEAVHLAEVLEELAKLQLKALSLGKP-LLTAPDEELDKH 209 (219)
T ss_pred HHHHHcCCcEEECCCHHHHHHHHHHHHHHHHHHHHHHhcCCC-CCCcCHHHHHHh
Confidence 5999999999999999999999999999999999999964 335666655543
No 23
>PRK08333 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=5.4e-42 Score=317.12 Aligned_cols=180 Identities=19% Similarity=0.360 Sum_probs=166.0
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHH
Q psy14071 83 KILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFS 162 (414)
Q Consensus 83 ~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~ 162 (414)
+++|++|+.++|+++++||+.+++||||+|++ |.|||||+|..+++++++||++||.+|+++++. +||+|+.
T Consensus 2 ~~~~~~l~~~~~~~~~~gl~~~~~GNiS~R~~---~~~lItpsG~~~~~l~~~di~~vd~~g~~~~g~-----~Ps~e~~ 73 (184)
T PRK08333 2 RNVKAQLVKYSKLAHERGLTAAFGGNLSIRVG---NLVFIKATGSVMDELTREQVAVIDLNGNQLSSV-----RPSSEYR 73 (184)
T ss_pred hHHHHHHHHHHHHHHHCCCCcCCCCeEEEEeC---CEEEEeCCCCCcccCCHHHEEEECCCCCCCCCC-----CCChhHH
Confidence 36899999999999999999999999999995 689999999999999999999999999998762 5899999
Q ss_pred HHHHHHHhCCCccEEEecCChhHHHhh-hccCCCccccHHHH-HhCCeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEec
Q psy14071 163 VHAAIHAARPDLKAIIHVATPAVVAVS-SLKCGLLPLSRESV-VLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLS 240 (414)
Q Consensus 163 iH~aIy~arPDv~aViH~H~~~~~A~S-~~~~~L~pi~qea~-~~g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLr 240 (414)
+|.+||++|||++||+|+||++++++| +....++++++++. ++|+||+.||..++ ++++++.++++|++ .+++||+
T Consensus 74 lH~~iyr~rpdv~aViHtH~~~a~a~s~~~~~~~p~~~~~~~~~~~~v~v~~~~~~g-~~~la~~~~~~l~~-~~~vll~ 151 (184)
T PRK08333 74 LHLAVYRNRPDVRAIAHLHPPYSIVASTLLEEELPIITPEAELYLKKIPILPFRPAG-SVELAEQVAEAMKE-YDAVIME 151 (184)
T ss_pred HHHHHHHhCCCCCEEEeCCcHHHHHHHHHcCCCCCCccHHHHHhCCCEeeecCCCCC-cHHHHHHHHHHhcc-CCEEEEc
Confidence 999999999999999999999999999 67777777878876 67899999998776 47899999999996 6899999
Q ss_pred CCceEEEcCCHHHHHHHHHHHHHHHHHHHHHh
Q psy14071 241 NNGAVCCGETVEEAFYNVYNLVAACEAQLKLM 272 (414)
Q Consensus 241 NHGvl~~G~tv~eAf~~~~~lE~aceiql~A~ 272 (414)
|||+++||+|+++||++++.+|++|++++.+.
T Consensus 152 nHGv~~~G~~~~eA~~~~e~lE~~A~~~~~~~ 183 (184)
T PRK08333 152 RHGIVTVGRSLREAFYKAELVEESAKLWYLKF 183 (184)
T ss_pred CCCCEEEcCCHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999998764
No 24
>PRK06357 hypothetical protein; Provisional
Probab=100.00 E-value=5e-42 Score=325.07 Aligned_cols=188 Identities=19% Similarity=0.241 Sum_probs=169.3
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcC--CCCEEEEccCCCC---ccCCCCCCEEEEe-CCCCcccCCCCCCCCC
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNV--DEEIFLVNPHGLL---YNEITASSLVKVD-MRGDIIEPGTTNFGVN 157 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~--~~d~flInP~G~~---~~evtasdLv~Vd-~dG~vv~~~~~~~~~~ 157 (414)
+.|++|++++|.++.+||+.+++||||+|+|+ ++++|||||+|++ |++++++||++|| .+|++++++ .+|
T Consensus 5 ~~r~~l~~~~r~l~~~Gl~~gt~GNiS~R~~~~~~~~~~~ITpsg~~g~~~~~lt~~Div~vd~~~g~~~~g~----~kP 80 (216)
T PRK06357 5 KEREDLAKVVKTMFDRKETNAAGGNISVRMTAEKNKEYIIMTPTLMSEAKLCDLSPYQILVVDLNTGEVIEGV----GRV 80 (216)
T ss_pred HHHHHHHHHHHHHHHcCCCccCCCEEEEEecccCCCCeEEEeCCCCCccccccCCHHHEEEEecCCCeEcCCC----CCC
Confidence 36999999999999999999999999999953 3468999999874 9999999999999 589999874 368
Q ss_pred CchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhCCeeeecCCCCCCcHHHHHHHHHHhCCC----
Q psy14071 158 TATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPN---- 233 (414)
Q Consensus 158 s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g~V~~~~y~g~~~~~ee~~~la~~Lg~~---- 233 (414)
|+|+.+|.+||++|||++||||+||++++++++.+..++|+++...++|++|++||..+++ ++.++.+++.+++.
T Consensus 81 SsE~~lH~~IY~~rpdv~aVvH~H~~~ata~a~~~~~lp~~~~~~~~~g~i~~~p~~~~gs-~ela~~v~~~l~~~~~~~ 159 (216)
T PRK06357 81 TREINMHEAAYVANPKIKCVYHSHAKESMFWATLGLEMPNLTEATQKLGKIPTLPFAPATS-PELAEIVRKHLIELGDKA 159 (216)
T ss_pred ChhHHHHHHHHHhCCCCCEEEecCcHHHHHHHHcCCCCCCccHHHHhcCCcceecccCCCc-HHHHHHHHHHHhhcCccc
Confidence 9999999999999999999999999999999999888888877667889999999998874 78899998887631
Q ss_pred -CcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14071 234 -NKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGL 276 (414)
Q Consensus 234 -~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~ 276 (414)
.+++||+|||+++||+|++|||++++++|++|++++.+...+.
T Consensus 160 ~~~~vLl~nHGvv~~G~~l~eA~~~~e~lE~~a~i~~~a~~l~~ 203 (216)
T PRK06357 160 VPSAFLLNSHGIVITDTSLHKAYDILETIEWNAYIAYQATVFDK 203 (216)
T ss_pred CCCEEEECCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 2699999999999999999999999999999999999988763
No 25
>PRK08660 L-fuculose phosphate aldolase; Provisional
Probab=100.00 E-value=1.4e-41 Score=313.62 Aligned_cols=179 Identities=25% Similarity=0.352 Sum_probs=164.4
Q ss_pred HHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHHH
Q psy14071 85 LRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVH 164 (414)
Q Consensus 85 ~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~iH 164 (414)
+|++|+.++|.++.+||+.+++||||+|++ +.|||||+|..|++++++||++||++|+.. ++ .+||+|+.+|
T Consensus 1 ~~~~l~~~~~~l~~~gl~~~~~GniS~R~~---~~~lItpsg~~~~~l~~~dlv~vd~~g~~~-~~----~~ps~E~~lH 72 (181)
T PRK08660 1 MWQEFARIGKKLFAHGLVSSHFGNISVRTG---DGLLITRTGSMLDEITEGDVIEVGIDDDGS-VD----PLASSETPVH 72 (181)
T ss_pred CHHHHHHHHHHHHHCCCcccCCceeEEEcC---CEEEEeCCCCCcccCChhHEEEEcCCCCcc-CC----CCCCccHHHH
Confidence 378999999999999999999999999983 689999999999999999999999999865 32 4799999999
Q ss_pred HHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhCCeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEecCCc
Q psy14071 165 AAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNG 243 (414)
Q Consensus 165 ~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLrNHG 243 (414)
.+||+ +||++||+|+||++++++|+.+..++|+++++. ++|+||++ |..+. +.++++.++++|++ ++++||+|||
T Consensus 73 ~~iy~-~~dv~aVvH~H~~~~~a~s~~~~~l~~~~~~~~~~~~~ipv~-~~~~~-~~~la~~v~~~l~~-~~~vll~nHG 148 (181)
T PRK08660 73 RAIYR-RTSAKAIVHAHPPYAVALSLLEDEIVPLDSEGLYFLGTIPVV-GGDIG-SGELAENVARALSE-HKGVVVRGHG 148 (181)
T ss_pred HHHHc-CCCCCEEEEeCChHHHHHHHcCCCCCCcCHHHHHhcCCEeEE-eCCCC-CHHHHHHHHHHHhh-CCEEEEcCCC
Confidence 99999 689999999999999999999889999988876 77899998 76666 47899999999997 6899999999
Q ss_pred eEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14071 244 AVCCGETVEEAFYNVYNLVAACEAQLKLMPAG 275 (414)
Q Consensus 244 vl~~G~tv~eAf~~~~~lE~aceiql~A~a~G 275 (414)
+++||+|+++||++++.+|++|++++.+..++
T Consensus 149 ~~~~G~~i~~A~~~~e~lE~~a~i~~~~~~l~ 180 (181)
T PRK08660 149 TFAIGKTLEEAYIYTSQLEHSCKVLYLVRTAK 180 (181)
T ss_pred ceEeCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999987654
No 26
>PRK13213 araD L-ribulose-5-phosphate 4-epimerase; Reviewed
Probab=100.00 E-value=4e-40 Score=314.59 Aligned_cols=204 Identities=14% Similarity=0.190 Sum_probs=177.6
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCC-CCcccCCCCCCCCCCchHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMR-GDIIEPGTTNFGVNTATFS 162 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~d-G~vv~~~~~~~~~~s~e~~ 162 (414)
++|++++.++|.+...||+.+++||||+|+++ ++.|||||+|..+++++++||++||++ |++++++ .+||+|+.
T Consensus 4 ~~r~evv~~~~~l~~~gl~~gt~GNiS~r~~~-~~~~~ITpsg~~~~~l~~~div~vd~~~g~~~~g~----~kPSsE~~ 78 (231)
T PRK13213 4 QLKQQVFEANLALPKYKLVTFTWGNVSGIDRE-HGLVVIKPSGVEYDVMSVNDMVVVDLATGKVVEGD----KKPSSDTD 78 (231)
T ss_pred HHHHHHHHHHHHHHHCCCCCCCcceEEEEECC-CCEEEEECCCCCcccCCHHHEEEEEcCCCCCcCCC----CCcCccHH
Confidence 48999999999999999999999999999864 468999999999999999999999995 9999874 37999999
Q ss_pred HHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccH-HHH-HhCCeeeecCCC----CCC-cHHHHHHHHHHhCC---
Q psy14071 163 VHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSR-ESV-VLGELSTHPFTG----YSR-GDEEKERIVRNLGP--- 232 (414)
Q Consensus 163 iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~q-ea~-~~g~V~~~~y~g----~~~-~~ee~~~la~~Lg~--- 232 (414)
+|.+||++|||++||||+||+++++||+++..++|+.. ++. +.|+||+.+|.. ++. ..+.++++++.+++
T Consensus 79 lH~~iY~~rpdv~AViHtHs~~at~~a~~~~~lp~~~~~~~~~~~g~Ip~~~~~~~~~~~g~~~~~~~~~~a~~~~~~~~ 158 (231)
T PRK13213 79 THLVLYRAFAEIGGIVHTHSRHATIWAQAGKSLSALGTTHADYFYGPIPCTRLMTEAEITGDYEHETGKVIVETFAEQGL 158 (231)
T ss_pred HHHHHHHhCCCCCEEEEcCCHHHHHHHHcCCCCCCcchHHHHHhCCCcceeecccccccCCccccchHHHHHHHHHhhcc
Confidence 99999999999999999999999999999999988754 344 557899988753 122 24667788887632
Q ss_pred ---CCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHh
Q psy14071 233 ---NNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDS 293 (414)
Q Consensus 233 ---~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~ 293 (414)
+++++||+|||++++|+|+++||++++.+|.+|++++.+...++ .+..|+++.++.++..
T Consensus 159 ~~~~~~avlL~nHG~v~~G~~l~eA~~~~e~lE~~A~i~~~a~~l~g-~~~~l~~~~~~~~~~~ 221 (231)
T PRK13213 159 RAADIPAVLVNGHGPFAWGSNAANAVHNAVVLEEIAYMNLFTHQLTP-GVGDMQQTLLDKHYLR 221 (231)
T ss_pred cccCCCEEEECCCCcEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCC-CCCCCCHHHHHHHHHh
Confidence 25899999999999999999999999999999999999999832 5789999999877654
No 27
>PRK03634 rhamnulose-1-phosphate aldolase; Provisional
Probab=100.00 E-value=3.5e-39 Score=315.58 Aligned_cols=207 Identities=19% Similarity=0.270 Sum_probs=177.0
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCC--------------------------CCEEEEccCCCCccCCC--CC
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVD--------------------------EEIFLVNPHGLLYNEIT--AS 135 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~--------------------------~d~flInP~G~~~~evt--as 135 (414)
.++++|+.++|.++++||+.+++||||+|++++ ++.|||||+|..|++++ ++
T Consensus 8 ~~~~~l~~~~~~l~~~Gl~~~~~GNiSvR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l~~~p~ 87 (274)
T PRK03634 8 WFVQGMIKVTSDLWLKGWDERNGGNISLRLTEEEVAPYGDDFHQQPRYIPLSQPMPELAGTYFLVTGSGKFFRNVQLDPA 87 (274)
T ss_pred HHHHHHHHHHHHHHHcCCccCCCCeEEEEcCchhhhhhhhccccccccccccccchhccCCEEEEeCCCcChhhhhcCch
Confidence 488999999999999999999999999999752 24899999999999994 44
Q ss_pred -C--EEEEeCCCCccc---CCCCCCCCCCchHHHHHHHH----Hh-CCCccEEEecCChhHHHhhhccCCCc--------
Q psy14071 136 -S--LVKVDMRGDIIE---PGTTNFGVNTATFSVHAAIH----AA-RPDLKAIIHVATPAVVAVSSLKCGLL-------- 196 (414)
Q Consensus 136 -d--Lv~Vd~dG~vv~---~~~~~~~~~s~e~~iH~aIy----~a-rPDv~aViH~H~~~~~A~S~~~~~L~-------- 196 (414)
| +++||.+|++++ +. .+..+||+|+.+|.+|| ++ |||++||+|+||+|++++|++.. ++
T Consensus 88 dd~~lv~vd~~G~~~~~~~g~-~~~~kPSsE~~lH~~IY~~~~~~~rpdv~AVvHtHs~~atals~~~~-l~~~~~~~~~ 165 (274)
T PRK03634 88 ANLGVIRIDSDGAGYHILWGL-TNGGKPTSELPAHLMSHIARLKATNGKDRVIMHCHATNLIALTYVLE-LDEAVFTRTL 165 (274)
T ss_pred hcCCEEEEcCCCCEeeeeccC-CCCCCCchHHHHHHHHHHHHhhccCCCCcEEEecCchHHHHHHCcCC-cChHhhhhhh
Confidence 4 778999998753 21 11247999999999999 45 99999999999999999999876 32
Q ss_pred -cccHHHH-Hh-CCeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhc
Q psy14071 197 -PLSRESV-VL-GELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMP 273 (414)
Q Consensus 197 -pi~qea~-~~-g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a 273 (414)
++.++.. ++ ++|+++||..+++ .+++++++++|++ ++++||+|||+++||+|+++||++++.+|++|++++.+++
T Consensus 166 ~~~~~e~~~~~~~~i~vvpy~~pgs-~eLa~~v~~~l~~-~~avLL~nHGvv~~G~~l~eA~~~~e~lE~~a~i~l~a~~ 243 (274)
T PRK03634 166 WEMSTECLVVFPDGVGIVPWMVPGT-DEIGQATAEKMQK-HDLVLWPKHGVFGSGPTLDEAFGLIDTAEKSAEIYVKVLS 243 (274)
T ss_pred hhcCccceeEeCCceeEecCCCCCC-HHHHHHHHHHhcc-CCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1334444 34 5799999998875 7899999999997 6899999999999999999999999999999999999999
Q ss_pred CCCCCCCCCCHHHHHHHHHhhc
Q psy14071 274 AGLDNLVLIPEDVRKEIYDSSR 295 (414)
Q Consensus 274 ~G~~~l~~l~~e~~~~~~~~~~ 295 (414)
.|. ++..+++++++++.+.+.
T Consensus 244 ~G~-~~~~l~~e~l~~l~~~~~ 264 (274)
T PRK03634 244 MGG-MKQTITDEELIALGERFG 264 (274)
T ss_pred cCC-CCCCCCHHHHHHHHHHcC
Confidence 985 478899999998877663
No 28
>PRK06754 mtnB methylthioribulose-1-phosphate dehydratase; Reviewed
Probab=100.00 E-value=4.6e-39 Score=303.19 Aligned_cols=191 Identities=16% Similarity=0.149 Sum_probs=162.3
Q ss_pred hhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCc
Q psy14071 80 KGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTA 159 (414)
Q Consensus 80 ~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~ 159 (414)
|.....+++|++++|.++..||+.+++||||+|+++++++|||||+|..+++++++||++||.+|++++++. .+||+
T Consensus 2 ~~~~~~~~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~~~~~lITpSG~~~~~l~~~div~vd~~g~~~~~~~---~kPSs 78 (208)
T PRK06754 2 KQLQRRWNELAEIKKELAARDWFPATSGNLSIKVSDDPLTFLVTASGKDKRKTTPEDFLLVDHDGKPVEETE---LKPSA 78 (208)
T ss_pred chHHHHHHHHHHHHHHHHHcCCcccCCCEEEEEeCCCCCEEEEeCCCCCcccCCHHHEEEEcCCCCCCCCCC---CCCCc
Confidence 355678999999999999999999999999999975445799999999999999999999999999998632 47999
Q ss_pred hHHHHHHHHHhCCCccEEEecCChhHHHhhhccC---CCccccHHHH---------HhCCeeeecCCCCCCcHHHHHHHH
Q psy14071 160 TFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKC---GLLPLSRESV---------VLGELSTHPFTGYSRGDEEKERIV 227 (414)
Q Consensus 160 e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~---~L~pi~qea~---------~~g~V~~~~y~g~~~~~ee~~~la 227 (414)
|+.+|.+||+. ||++||||+||++++++|++.. .+++...+.. ..++||+.++... .+++++.++
T Consensus 79 E~~lH~~iY~~-pdv~aViHtH~~~at~~s~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~vpv~~~~~~--~~eLa~~v~ 155 (208)
T PRK06754 79 ETLLHTHIYNN-TNAGCVLHVHTVDNNVISELYGDDGAVTFQGQEIIKALGIWEENAEIHIPIIENHAD--IPTLAEEFA 155 (208)
T ss_pred cHHHHHHHHhC-CCCeEEEEeCCHHHHHHHhhcCCCCeeeecChhhhhccCccccCceEEEEEecCCCC--HHHHHHHHH
Confidence 99999999998 9999999999999999998852 2322222211 1235888874332 478999999
Q ss_pred HHhCCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14071 228 RNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGL 276 (414)
Q Consensus 228 ~~Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~ 276 (414)
+.|+++++++||+|||+++||+|+++||.+++.+|.+|++++.+++.+.
T Consensus 156 ~~l~~~~~avLl~nHG~v~~G~~l~~A~~~~E~lE~~a~~~~~~~~~~~ 204 (208)
T PRK06754 156 KHIQGDSGAVLIRNHGITVWGRDAFEAKKHLEAYEFLFSYHIKLLSIQG 204 (208)
T ss_pred HHhccCCcEEEECCCceEEEeCCHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 9998336899999999999999999999999999999999999988663
No 29
>PRK09220 methylthioribulose-1-phosphate dehydratase; Provisional
Probab=100.00 E-value=4.6e-38 Score=295.62 Aligned_cols=186 Identities=17% Similarity=0.232 Sum_probs=158.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchH
Q psy14071 82 EKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATF 161 (414)
Q Consensus 82 e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~ 161 (414)
..+.|++|+.++|.++.+||+++.+||||+|+++ +.|||||+|..+++++++||++||++|++++++ .+|++|+
T Consensus 3 ~~~~~~~l~~~~r~l~~~Gl~~~~~GNiSvr~~~--~~~lItpsG~~~~~l~~~di~~vd~~g~~~~~~----~~Ps~E~ 76 (204)
T PRK09220 3 LEELLQQLIAAGRWIGARGWVPATSGNMSVRLDE--QHCAITVSGKDKGSLTAEDFLQVDIAGNAVPSG----RKPSAET 76 (204)
T ss_pred HHHHHHHHHHHHHHHHHCCCCCCCCceEEEEcCC--CEEEEECCCCChhHCChhhEEEEcCCCCCCCCC----CCcChhH
Confidence 3568999999999999999999999999999863 689999999999999999999999999998864 3689999
Q ss_pred HHHHHHHHhCCCccEEEecCChhHHHhhhccCC--CccccHHHH-HhC---------CeeeecCCCCCCcHHHHHHHHHH
Q psy14071 162 SVHAAIHAARPDLKAIIHVATPAVVAVSSLKCG--LLPLSRESV-VLG---------ELSTHPFTGYSRGDEEKERIVRN 229 (414)
Q Consensus 162 ~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~--L~pi~qea~-~~g---------~V~~~~y~g~~~~~ee~~~la~~ 229 (414)
.+|.+||++|||++||+|+||++++++|+.... +++..++.. .+| .||+++. ++. .++.++.+++.
T Consensus 77 ~lH~~iy~~rpdv~aViH~H~~~~~a~s~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~-~~~-~~eLa~~v~~~ 154 (204)
T PRK09220 77 LLHTQLYRLFPEIGAVLHTHSVNATVLSRVEKSDALVLEGYELQKAFAGQTTHETAVVVPIFDN-DQD-IARLAARVAPY 154 (204)
T ss_pred HHHHHHHHhCCCCcEEEecCcHHHHHHHhhcCCCeeeecChhHHHHhCCCcccCCeeEEeeecC-CCC-HHHHHHHHHHH
Confidence 999999999999999999999999999998654 433333433 443 3565543 222 47889999999
Q ss_pred hCCCC--cEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14071 230 LGPNN--KVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAG 275 (414)
Q Consensus 230 Lg~~~--~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G 275 (414)
|++.. +++||+|||+++||+|+++||.+++.+|..|++.+.+.+.+
T Consensus 155 l~~~~~~~avlL~nHGvi~~G~~~~eA~~~~e~lE~~~~~~~~~~~~~ 202 (204)
T PRK09220 155 LDAQPLRYGYLIRGHGLYCWGRDMAEARRHLEGLEFLFECELERRLLE 202 (204)
T ss_pred HHhCCCCcEEEECCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 98643 48999999999999999999999999999999888887655
No 30
>TIGR02624 rhamnu_1P_ald rhamnulose-1-phosphate aldolase. Members of this family are the enzyme RhaD, rhamnulose-1-phosphate aldolase.
Probab=100.00 E-value=7.2e-38 Score=305.48 Aligned_cols=211 Identities=17% Similarity=0.255 Sum_probs=178.8
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCC-------------------------CCEEEEccCCCCccCCCC--
Q psy14071 82 EKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVD-------------------------EEIFLVNPHGLLYNEITA-- 134 (414)
Q Consensus 82 e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~-------------------------~d~flInP~G~~~~evta-- 134 (414)
++.++++|+.++|.+++.||+.+++||||+|++++ ++.|||||+|..|+++++
T Consensus 6 ~~~~~~~i~~~~~~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lITpSG~~~~~l~~~~ 85 (270)
T TIGR02624 6 DSPFVQEMIKTTSDLWRLGWDERNGGNISLRLDEEEVAPYLDFHQVPRKIPLKFPAPELANKYFLVTGSGKFFRNVEENP 85 (270)
T ss_pred cHHHHHHHHHHHHHHHHcCCcCCCCCEEEEEcCccccchhhcccccccccccccccccccCCEEEEeCCCCCHHhcccCc
Confidence 35689999999999999999999999999999754 368999999999999994
Q ss_pred -CCE--EEEeCCCCcccCC--CCCCCCCCchHHHHHH----HHHhCCCccEEEecCChhHHHhhhccCC--------Ccc
Q psy14071 135 -SSL--VKVDMRGDIIEPG--TTNFGVNTATFSVHAA----IHAARPDLKAIIHVATPAVVAVSSLKCG--------LLP 197 (414)
Q Consensus 135 -sdL--v~Vd~dG~vv~~~--~~~~~~~s~e~~iH~a----Iy~arPDv~aViH~H~~~~~A~S~~~~~--------L~p 197 (414)
+|+ ++||.+|++++.. -.+..+||+|+.+|.+ ||+.|||++||+|+||++++++|++... +++
T Consensus 86 ~~d~~iv~vd~~G~~~~~~~~~~~g~kPSsE~~mH~~v~~~iy~~rpd~~AVvHtHp~~ata~s~~~~~~~~~~~~~l~~ 165 (270)
T TIGR02624 86 AENLGILRVSEDGASVHLLWGLTDGGVPTSELPAHFMSHIARLKVDPENRVIMHCHATNLIAMTFTHELDEAVFTRTLWQ 165 (270)
T ss_pred hhceeEEEECCCCCEEEeeccccCCCCcChHHHHHHHHHHHHHHhCCCCCEEEccCcHHHHHHHccCcccchhccccccc
Confidence 686 6689999998720 0011379999999986 6999999999999999999999998641 222
Q ss_pred ccHHHH-Hh-CCeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14071 198 LSRESV-VL-GELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAG 275 (414)
Q Consensus 198 i~qea~-~~-g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G 275 (414)
+..++. ++ +.|++.||..+++ .++++++++.|++ ++++||+|||+++||+|+++||.+++.+|++|++++.+++.|
T Consensus 166 ~~~e~~~~~~~~i~vvp~~~pGs-~eLA~~v~~~l~~-~~avLL~nHGvva~G~~l~eA~~~~E~lE~~A~i~~~a~~lg 243 (270)
T TIGR02624 166 MCTECLVVFPDGVGIIPWMVPGT-NEIGEATAEKMKE-HRLVLWPHHGIFGAGPSLDETFGLIETAEKSAEVYTKVYSQG 243 (270)
T ss_pred cccchhheeCCccccccCcCCCC-HHHHHHHHHHhcc-CCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 333433 45 4699999988875 6999999999996 689999999999999999999999999999999999999988
Q ss_pred CCCCCCCCHHHHHHHHHhhc
Q psy14071 276 LDNLVLIPEDVRKEIYDSSR 295 (414)
Q Consensus 276 ~~~l~~l~~e~~~~~~~~~~ 295 (414)
.+ +..|++++++++.+.+.
T Consensus 244 ~~-~~~L~~e~l~~~~~~~~ 262 (270)
T TIGR02624 244 GV-KQTISDEQLIALAKRFG 262 (270)
T ss_pred CC-CCCCCHHHHHHHHHHhC
Confidence 53 57899999998887654
No 31
>PRK06755 hypothetical protein; Validated
Probab=100.00 E-value=3e-37 Score=290.83 Aligned_cols=186 Identities=17% Similarity=0.117 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSV 163 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~i 163 (414)
..|++|++++|.++.+||+.+++||||+|+++++.+|+|||+|..+++++++|+++||++|+++..+ ..+||+|+.+
T Consensus 6 ~~~~~l~~~~~~l~~rGw~~gtsGNlSv~~~~~~~~~~ITpSG~~k~~L~~eDiv~vd~~g~~~~~~---~~kPSsE~~~ 82 (209)
T PRK06755 6 KKWNELKDVKSELALRDWFYGTKISLSLCTSKEPLTFLVNVEGRDKGLFSEEDFIVVNCMCEPVFEN---EEKPAAESFM 82 (209)
T ss_pred HHHHHHHHHHHHHHHCCCCccCCCCeEEEecCCCcEEEEeCCCCCcccCCcccEEEEeCCCCCccCC---CCCcCccHHH
Confidence 3578999999999999999999999999876554579999999999999999999999999988432 1479999999
Q ss_pred HHHHHHhCCCccEEEecCChhHHHhhhc-cCC--CccccHHHH-HhC-------CeeeecCCCCCCcHHHHHHHHHHhCC
Q psy14071 164 HAAIHAARPDLKAIIHVATPAVVAVSSL-KCG--LLPLSRESV-VLG-------ELSTHPFTGYSRGDEEKERIVRNLGP 232 (414)
Q Consensus 164 H~aIy~arPDv~aViH~H~~~~~A~S~~-~~~--L~pi~qea~-~~g-------~V~~~~y~g~~~~~ee~~~la~~Lg~ 232 (414)
|.+||+.+| ++||||+||++++++|++ +.. +++...+.. .+| +||+.||...+. .+.++.+++.+++
T Consensus 83 H~~IY~~~~-~~AVvHtHs~~at~ls~~~~~~~~i~~~~~e~~~~~g~~~~~~~~IPiv~~~~~~~-~~la~~~~~~~~~ 160 (209)
T PRK06755 83 HADIYKKSS-AECILQVQTVDSHLISELYGEEGEVTFDKRSVERVFGKEGITEMTIPIVEDEKKFA-DLLENNVPNFIEG 160 (209)
T ss_pred HHHHHhcCC-CcEEEEcCCHHHHHHHHhhccCCcccccchHHHHHhcccCCCceEEEEEeCCCchh-HHHHHHHHhhccC
Confidence 999999875 999999999999999998 432 554444443 445 399999988764 5667777777765
Q ss_pred CCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14071 233 NNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAG 275 (414)
Q Consensus 233 ~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G 275 (414)
.+++||+|||+++||+|+++|+.+++.+|..|++++++++.+
T Consensus 161 -~~avLl~~HGv~~~G~~l~eA~~~~E~lE~l~~~~~~~~~l~ 202 (209)
T PRK06755 161 -GGVVLVHNYGMIVWGKTPEEAKKWLEGIEYLMNYHVKLLMIK 202 (209)
T ss_pred -CCEEEEcCCCeEEEcCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 689999999999999999999999999999999999998754
No 32
>TIGR03328 salvage_mtnB methylthioribulose-1-phosphate dehydratase. Members of this family are the methylthioribulose-1-phosphate dehydratase of the methionine salvage pathway. This pathway allows methylthioadenosine, left over from polyamine biosynthesis, to be recycled to methionine.
Probab=100.00 E-value=1.5e-37 Score=289.74 Aligned_cols=176 Identities=20% Similarity=0.297 Sum_probs=152.7
Q ss_pred HHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHHHHHHH
Q psy14071 89 VAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIH 168 (414)
Q Consensus 89 LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~iH~aIy 168 (414)
|+.++|.++++||+++++||||+|+++ +.|||||+|..+++++++||++||++|++++++ .+|++|+.+|.+||
T Consensus 1 i~~~~r~l~~~Gl~~~~~GniS~r~~~--~~~lItpsg~~~~~l~~~di~~v~~~g~~~~g~----~~ps~e~~~H~~iy 74 (193)
T TIGR03328 1 LIEAGRDLYKRGWVPGTGGNLSARLDE--DEILITPSGVDKGRLTPEDFLVVDLQGKPVSGG----LKPSAETLLHTQLY 74 (193)
T ss_pred CHHHHHHHHHcCCCccCCCEEEEEcCC--CEEEEeCCCCChhhCCcceEEEEcCCCCCCCCC----CCCCcHHHHHHHHH
Confidence 468999999999999999999999853 689999999999999999999999999999864 36899999999999
Q ss_pred HhCCCccEEEecCChhHHHhhhccCC--Ccccc-HHHH-Hh-C--------CeeeecCCCCCCcHHHHHHHHHHhC--CC
Q psy14071 169 AARPDLKAIIHVATPAVVAVSSLKCG--LLPLS-RESV-VL-G--------ELSTHPFTGYSRGDEEKERIVRNLG--PN 233 (414)
Q Consensus 169 ~arPDv~aViH~H~~~~~A~S~~~~~--L~pi~-qea~-~~-g--------~V~~~~y~g~~~~~ee~~~la~~Lg--~~ 233 (414)
++|||++||+|+||+|++++|++... ..|+. ++.+ .+ | +||+.+| .++ ..++++.++++|. +.
T Consensus 75 ~~~pdv~aVvH~H~~~a~a~s~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~vp~~~~-~~g-s~ela~~~~~~l~~~~~ 152 (193)
T TIGR03328 75 RLTPGAGAVLHTHSVEATVLSRLYPSNGAFELEGYEMLKALPGITTHEDKLTIPIFEN-TQD-IARLADSVAPYLEAYPD 152 (193)
T ss_pred HhCCCCeEEEEcCCHHHHHHHhhcccCCeeeccchhhhhhhCCCcCCCCceEEeeecC-CCC-hHHHHHHHHHHHhcCCC
Confidence 99999999999999999999988653 23443 3333 22 3 5899987 444 3788999999995 34
Q ss_pred CcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHh
Q psy14071 234 NKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLM 272 (414)
Q Consensus 234 ~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~ 272 (414)
.+++||+|||+++||+|+++||.+++.+|..|++.+.++
T Consensus 153 ~~avll~nHGv~~~G~~~~~A~~~~e~lE~~a~~~~~~~ 191 (193)
T TIGR03328 153 VPGVLIRGHGLYAWGRDWEEAKRHLEALEFLFECELEML 191 (193)
T ss_pred CCEEEEcCCcceEEcCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 689999999999999999999999999999999998875
No 33
>PRK08324 short chain dehydrogenase; Validated
Probab=99.95 E-value=5.4e-28 Score=263.47 Aligned_cols=197 Identities=16% Similarity=0.148 Sum_probs=156.5
Q ss_pred HHHHHHHHHHHHHHhCCcccccceEEEEEcCC------CCEEEEccCCCCccCCCCCCEEEEeCCC--------------
Q psy14071 85 LRCKVAAVYRLMDLYGWTQNIQNHITARLNVD------EEIFLVNPHGLLYNEITASSLVKVDMRG-------------- 144 (414)
Q Consensus 85 ~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~------~d~flInP~G~~~~evtasdLv~Vd~dG-------------- 144 (414)
++..+....++....|++.+.+||+|+|+.+. .+.|||+|+|..++.++++|++.||+++
T Consensus 16 ~~~~v~~~~~l~~~~~l~~~~gGN~S~k~~~~~~~g~~~~~~~it~SG~~~~~l~~~~~~~v~~~~~~~~~~~~~~~~~~ 95 (681)
T PRK08324 16 LALLVYRSRLLGADPRLVNHGGGNTSVKTTETDLTGEPVEVLWVKGSGGDLATITAAGFAALRLDPLRALKELGVLSDDE 95 (681)
T ss_pred HHHHHHHHHHhCCCHHHhccCCceeeeeeeccccCCCeeeEEEEECCccChhhccccCCCeeeHHHHHhhhccCCcchHH
Confidence 55556666666667779999999999998532 2479999999999999999999999873
Q ss_pred -------CcccCCCCCCCCCCchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhCCeeeecCCCCC
Q psy14071 145 -------DIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYS 217 (414)
Q Consensus 145 -------~vv~~~~~~~~~~s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g~V~~~~y~g~~ 217 (414)
+.+..+ ...||+|+.||..||+ ++|+|+||++++++|+++++++++.+. +.++|+++||.+++
T Consensus 96 ~~~~~~~~~~~~~---~~~pS~e~~lH~~i~~-----~~V~HtH~~~~~a~s~~~~~~~~~~~~--~~~~v~~~py~~pg 165 (681)
T PRK08324 96 MVAYLRHCLFDPN---APAPSIETLLHAFLPF-----KHVDHTHPDAIIAIANAPDGEELTREI--FGDRVGWVPYVRPG 165 (681)
T ss_pred HHHHHHhhccCCC---CCCCchhHHHHhhcCC-----CEEEecCchHHHHHHcCCCHHHHHHHH--cCCceEEcCccCCC
Confidence 222221 2479999999999985 469999999999999998877665433 44679999999998
Q ss_pred CcHHHHHHHHHHhCC--CCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcC--CCCCCCCCCHHHHHHHHHh
Q psy14071 218 RGDEEKERIVRNLGP--NNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPA--GLDNLVLIPEDVRKEIYDS 293 (414)
Q Consensus 218 ~~~ee~~~la~~Lg~--~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~--G~~~l~~l~~e~~~~~~~~ 293 (414)
. ++++.+++.+.. ..+++||+|||+++||+|++|||.+++.+|++|++|+.+++. |+.++..+++++.+.+.+.
T Consensus 166 ~--~l~~~~~~~~~~~~~~~~~lL~nHG~~~~G~~~~eA~~~~~~~e~~a~~~~~a~~~~~g~~~~~~l~~~~~~~~~~~ 243 (681)
T PRK08324 166 F--DLALAIAEAVRANPGAEGVVLGKHGLFTWGDTAKEAYERTIEIITRAEEYIEARGAGFGGAVYEALPAPERRAIAAA 243 (681)
T ss_pred h--HHHHHHHHHHHhCCCCcEEEECCCCCeeccCCHHHHHHHHHHHHHHHHHHHHHhccccCCccccCCCchhHHHHHHH
Confidence 4 445555554432 257999999999999999999999999999999999999987 5445668888877665443
No 34
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.90 E-value=1.4e-23 Score=228.84 Aligned_cols=191 Identities=17% Similarity=0.188 Sum_probs=151.8
Q ss_pred HHHHHHHHHHHHHhCCcccccceEEEEEcCCC-------CEEEEccCCCCccCCCCCCEEEEeCCC--------------
Q psy14071 86 RCKVAAVYRLMDLYGWTQNIQNHITARLNVDE-------EIFLVNPHGLLYNEITASSLVKVDMRG-------------- 144 (414)
Q Consensus 86 R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~-------d~flInP~G~~~~evtasdLv~Vd~dG-------------- 144 (414)
++.+....++....|++.+.+||+|+|+.+++ +.|||+|+|..+++++++|++.||+++
T Consensus 2 ~~~v~~s~~~g~~~~l~~~~gGN~Svk~~~~~~~~g~~~~~~~I~~SG~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~ 81 (676)
T TIGR02632 2 AELVYRSNLLGADRRITNYGGGNTSAKTTETDPLTGGEVEVMWVKGSGGDLGTMTAANFAGLRLDKLRPLKERYPGVETE 81 (676)
T ss_pred HHHHHHHHHhCCCHHHhccCCccceeeccccCCCcCceeeEEEEECCccCHhhccccCCceEechHHHHHhhhccccCCH
Confidence 34566667777788889999999999986432 379999999999999999999999984
Q ss_pred ----------CcccCCCCCCCCCCchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhC-CeeeecC
Q psy14071 145 ----------DIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLG-ELSTHPF 213 (414)
Q Consensus 145 ----------~vv~~~~~~~~~~s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g-~V~~~~y 213 (414)
.+.++ ..+||+|+.+|..||. ++|.|+||++++++|+...+.+ +.. .++| +|++.||
T Consensus 82 ~~~v~~~~~~~~~~~----~~~PS~Et~lH~~i~~-----~~v~HtH~~~~~a~a~~~~~~~-~~~--~~~g~~v~~vpy 149 (676)
T TIGR02632 82 DEMVAYLPHCLFNLN----GRAPSIDTPLHAFVPF-----KHVDHMHPDAIIALACAENGRE-LTE--EIFGDEVVWVPW 149 (676)
T ss_pred HHHHHHHHhcccCCC----CCCCCccHHHHhhccc-----ceEEecCchHHHHHhcCccHHH-HHH--HHcCCeEEEecc
Confidence 33333 2479999999999974 4677999999999998876542 222 2455 6999999
Q ss_pred CCCCCcHHHHHHHHHHhCC--CCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCC-----CCCCCCCHHH
Q psy14071 214 TGYSRGDEEKERIVRNLGP--NNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGL-----DNLVLIPEDV 286 (414)
Q Consensus 214 ~g~~~~~ee~~~la~~Lg~--~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~-----~~l~~l~~e~ 286 (414)
..++. ++++.+++.+.. ..+++||+|||+++||+|++||+.+++.+|+.|++.+.+...|. ..+..++++.
T Consensus 150 ~~pG~--~La~~~~~~~~~~~~~~~vll~~HGl~~~G~~~~eA~~~~~~~e~~a~~~~~~~~~g~~~~~~~~~~~l~~~~ 227 (676)
T TIGR02632 150 RRPGF--QLGLDIAAQVDANPQAKGVVLEGHGLVVWGDTAKECYERTLSIINEAEQFIEEKRGGEAPFGGAAYAALPKEE 227 (676)
T ss_pred ccCCh--HHHHHHHHHHHhCCCCcEEEEcCCCeEEecCCHHHHHHHHHHHHHHHHHHHHhccccccCCcccccccccchh
Confidence 99875 577778777753 23799999999999999999999999999999999999987662 1256677776
Q ss_pred HHHH
Q psy14071 287 RKEI 290 (414)
Q Consensus 287 ~~~~ 290 (414)
++.+
T Consensus 228 ~~~~ 231 (676)
T TIGR02632 228 RRAL 231 (676)
T ss_pred hhhH
Confidence 5443
No 35
>KOG2631|consensus
Probab=99.83 E-value=3.4e-19 Score=164.13 Aligned_cols=187 Identities=17% Similarity=0.208 Sum_probs=150.9
Q ss_pred HHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCC-CCCCCCchHHH
Q psy14071 85 LRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTT-NFGVNTATFSV 163 (414)
Q Consensus 85 ~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~-~~~~~s~e~~i 163 (414)
.|.-+..++|.++..||+.|++|-|+++.+ +.++|.|+|+.++.++++||++.|++++.+..++. ...+++.-.+|
T Consensus 20 p~~Li~eLc~qFY~lgWvtGTGgai~ik~~---~ei~iaPSgVQKErm~peDlfv~~~~~~~~~~P~~~k~~k~s~CtpL 96 (238)
T KOG2631|consen 20 PRNLICELCRQFYHLGWVTGTGGAISIKHG---DEIYIAPSGVQKERMQPEDLFVMDLNTEYISVPKPSKKLKPSQCTPL 96 (238)
T ss_pred hHHHHHHHHHHHHhcCceeccCCeEEEeeC---CeeEeCcchhhhhhCCccceEEEecCCceeccCCCcCCCCccccHHH
Confidence 455588899999999999999999999997 56999999999999999999999999976665421 23578999999
Q ss_pred HHHHHHhCCCccEEEecCChhHHHhhhccC--CCccccHHHH--Hh-----------C--CeeeecCCCCCCcHHHHHHH
Q psy14071 164 HAAIHAARPDLKAIIHVATPAVVAVSSLKC--GLLPLSRESV--VL-----------G--ELSTHPFTGYSRGDEEKERI 226 (414)
Q Consensus 164 H~aIy~arPDv~aViH~H~~~~~A~S~~~~--~L~pi~qea~--~~-----------g--~V~~~~y~g~~~~~ee~~~l 226 (414)
-+++|..| |+.||||+|+..++..+.+-. .+.--++|.. +. . .||+++-.. ...++.+.+
T Consensus 97 F~~~y~~r-~AgAvIHTHS~~Avl~t~L~~~~~F~ith~EmIKgI~~~~~g~~~~y~D~L~vPIIeNt~--~E~~L~D~l 173 (238)
T KOG2631|consen 97 FMAAYTMR-DAGAVIHTHSQAAVLATLLFPSDEFRITHQEMIKGIPKGNSGGYLPYFDTLVVPIIENTP--SESDLKDSL 173 (238)
T ss_pred HHHHHHhc-CCceEEEeccHHHHHHHhhcccceeEeehHHHHhcCCCCCCCccccccceEEEeeecCCc--hHHHHHHHH
Confidence 99999976 899999999999999998754 3433334432 11 1 145554221 235667888
Q ss_pred HHHhC--CCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy14071 227 VRNLG--PNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLD 277 (414)
Q Consensus 227 a~~Lg--~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~ 277 (414)
.+++. |...+||.||||+++||+|.+.|--..+..+..-++.+.....|.|
T Consensus 174 ~~aie~YP~tcAVLVR~HGvyvWG~TWekaKt~~EcydYLfelaikm~klgip 226 (238)
T KOG2631|consen 174 KKAIELYPDTCAVLVRRHGVYVWGPTWEKAKTMTECYDYLFELAIKMKKLGIP 226 (238)
T ss_pred HHHHHhCCcceEEEEecCcEEEecCcHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 88775 4578999999999999999999999999999999999999988864
No 36
>KOG3699|consensus
Probab=99.78 E-value=2.3e-20 Score=194.03 Aligned_cols=300 Identities=21% Similarity=0.236 Sum_probs=211.4
Q ss_pred HHHHHHHHHHHHHcCCCCchhhHHHh--hh--hc----cccccccccccccCCC---------------cccCCCCCCCC
Q psy14071 17 REELERIIEIQMKDGSGSATLLQSIS--DM--MG----LQGQRLQSAHLFRSSN---------------CVVPINDIRGV 73 (414)
Q Consensus 17 ~~ele~~~~~~~~~g~~~~~~l~~~~--~~--~~----~~~~~~~~~~~~~~~~---------------~~~pi~d~~g~ 73 (414)
..|+|.++++|++.|+.++...|+.+ .. +. .|.. .++..|...+ -.+++-++..
T Consensus 264 e~efe~lmr~ldn~~~rtg~~yR~p~~~~k~~~~sdV~~P~~--v~~~~~~~d~~~v~~~r~~~~~~~~e~tRwlNspn- 340 (598)
T KOG3699|consen 264 EQEFEALMRMLDNLGYRTGYNYRHPALREKPSKKSDVEIPAT--VTAFGFATDGAPVSPLRQAPQKQQREKTRWLNLPN- 340 (598)
T ss_pred hHHHHHHHHHHhhccccccccccchhhcccCCCccceecchh--hhhhhhhccCCcCChhhhccchhhhhhhhhcCCcc-
Confidence 68999999999999988776633221 11 10 1110 0111111111 1223333222
Q ss_pred ccCCCChhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEc--CCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCC
Q psy14071 74 ESMGYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLN--VDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGT 151 (414)
Q Consensus 74 e~~~~~~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~--~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~ 151 (414)
-...+...|...+..+++++ ....+|.+++.+|+++|+. .....|+|||.+..+.+.+++++.++|.+|....++.
T Consensus 341 ~~~~~~~~e~~~~npka~t~--w~~~~~ne~s~~~~pVrIedP~qfvp~~~NP~Evle~rnkIreqnr~D~ksAGPQSql 418 (598)
T KOG3699|consen 341 KVDEVDEEERGMRNPKAKTT--WVKEDWNEGSASHTPVRIEDPNQFVPLLINPKEVLEMRNKIREQNRQDVKSAGPQSQL 418 (598)
T ss_pred ccccccHHhhccCCccccee--eeeccccccccCCceeeccCCCCccccccCHHHHHHHHhhHHHhhhccccccCCCcce
Confidence 12245567777889999999 7788999999999999975 4456899999999999999999999999998776654
Q ss_pred CCCCC--CCchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhCCeeeecCCCCCCcHHHHHHHHHH
Q psy14071 152 TNFGV--NTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRN 229 (414)
Q Consensus 152 ~~~~~--~s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g~V~~~~y~g~~~~~ee~~~la~~ 229 (414)
++..+ .+.....|++||+.||+++||+|.|.+.....++.+++|++..++...-+...|++|.+...++.+.. +.
T Consensus 419 L~~V~~e~s~~~~~~Sai~~~r~e~k~v~h~~~~pnpf~~ltd~eL~EYkqeverk~~~~~~d~d~~~~d~~e~a---kd 495 (598)
T KOG3699|consen 419 LASVTAEKSRSLSTHSAIHQVRPEVKCVCHRHYPPNPFVSLTDHELLEYKQEVERKGKGVYHDYDGILSDPGEQA---KD 495 (598)
T ss_pred ecceecccccccchhhhhhhcCCcccceeecccCCCcccccCchhhhhhhhhhhccCcccccccccccccccccc---cc
Confidence 33322 44555689999999999999999999999999999999999999888778888999999877655544 78
Q ss_pred hCCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCC----CCCCCHHHHHHHHHhhcCCCCCCCCCC
Q psy14071 230 LGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDN----LVLIPEDVRKEIYDSSRVCPEGAIPAG 305 (414)
Q Consensus 230 Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~----l~~l~~e~~~~~~~~~~~~~~~~~~~~ 305 (414)
++. .+ ++++|||+.++|++|+ |.......+.+|+.|....+++.+. ...++-.+.. ..+. ..... .|
T Consensus 496 ~~~-~p-v~~~nh~i~Tq~~~V~-aa~~~sl~~~a~~~q~s~as~~~~~~~~~~g~~~n~v~~-e~~~-e~~~~----k~ 566 (598)
T KOG3699|consen 496 LAD-SP-VILRNHGIMTQGESVE-AAYLLSLMELACETQLSIASATAPGPAQNAGVVPNNVEV-EHTV-EVNRV----KG 566 (598)
T ss_pred ccc-CC-cccccccceecccccc-cchhhHHHHHHHHhhhhhccccCCCccccccccccchhh-hccc-Ccccc----cc
Confidence 876 46 8999999999999999 8889999999999999887765321 1112211110 0000 00000 00
Q ss_pred CCCCCchhhHhhhhhhccchhhHHHHHHhhhhcCCCCC
Q psy14071 306 TNSPTPAVLEKKEKRWRIGGMEFEALMRMLDNAKIPTG 343 (414)
Q Consensus 306 ~~~~~~~~~~~~~~~w~~g~~~feal~R~ld~~g~rTg 343 (414)
-.....| .+..||++-||++|-.+|-+|
T Consensus 567 ---------~S~~~~~-a~~~E~~a~~k~~e~~~~~~~ 594 (598)
T KOG3699|consen 567 ---------YSAASPG-AGIYEVAAYMRSLEIISYVLG 594 (598)
T ss_pred ---------cccccCC-cchhhhhccccchhhhccccC
Confidence 0112234 468899999999999886443
No 37
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=99.42 E-value=9e-13 Score=131.81 Aligned_cols=172 Identities=20% Similarity=0.273 Sum_probs=134.3
Q ss_pred HHHHHHHHHH-HhCCcccccceEEEEEcCCC------CEEEEccCCCCccCCCCCCEEEEeCCC----------------
Q psy14071 88 KVAAVYRLMD-LYGWTQNIQNHITARLNVDE------EIFLVNPHGLLYNEITASSLVKVDMRG---------------- 144 (414)
Q Consensus 88 ~LAa~~Rll~-~~G~~~~~~GhISvRv~~~~------d~flInP~G~~~~evtasdLv~Vd~dG---------------- 144 (414)
+|....|++. ...++...+||-|+++.+.+ +.+||+.||...+.|+++.+.-|.++-
T Consensus 19 ~lvY~S~liGsdp~lv~~GGGNTS~K~~~~dl~G~~v~vmwVKgSG~dl~ti~~~gf~~v~l~~Ll~l~~~~~~~d~eMV 98 (404)
T COG3347 19 LLVYRSRLIGSDPDLVLHGGGNTSVKTGETDLVGEEVEVLWVKGSGWDLATIKADGFVPVRLDPLLALKKLDKLPDEEMV 98 (404)
T ss_pred HHHHHHhhhcCChhheecCCCccceeeeccccCCceeEEEEEeccccchhhhccCCCcccchHhHHHHHhcCCCCHHHHH
Confidence 4444455554 23466778999999997643 456999999999999998887775542
Q ss_pred -----CcccCCCCCCCCCCchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhCC-eeeecCCCCCC
Q psy14071 145 -----DIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGE-LSTHPFTGYSR 218 (414)
Q Consensus 145 -----~vv~~~~~~~~~~s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g~-V~~~~y~g~~~ 218 (414)
+.++. ..+.||-|..+|+-+ .-+.|.|+|+.+.+++++..++= .+.. -++|. +.|+||-.|+.
T Consensus 99 ~~l~~~~~n~---~~PrPSIET~LHAfl-----P~k~VdHtH~dAiiaIa~~~n~~-~l~~--~I~Gd~~~~vPYvrPGf 167 (404)
T COG3347 99 GYLRHCMLNP---SAPRPSIETLLHAFL-----PFKVVDHTHADAIIAIAVQANGK-ALIR--EIFGDRVVWVPYVRPGF 167 (404)
T ss_pred HHHHHhhcCC---CCCCcchhhhhHhhc-----CcccccccCccceeeeccCCCHH-HHHH--HhcCCeEEEEeccCCCc
Confidence 11221 235789999999876 45899999999999999886652 1222 17885 99999999997
Q ss_pred cHHHHHHHHHHhC--CCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHh
Q psy14071 219 GDEEKERIVRNLG--PNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLM 272 (414)
Q Consensus 219 ~~ee~~~la~~Lg--~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~ 272 (414)
+++..+++.+. ++.++|+|.|||+++||+|-.||+.+++.+..-|+-.+...
T Consensus 168 --~La~~iae~~~~~p~~~glvL~~HGL~t~gdtak~~Ye~~I~~V~~Ae~~l~~~ 221 (404)
T COG3347 168 --PLAKAIAERFKANPDAEGLVLENHGLFTFGDTAKEAYERMISIVNEAEEYLARR 221 (404)
T ss_pred --hHHHHHHHHHhhCCCceEEEeccccceEecccHHHHHHHHHHHHHHHHHHHHhh
Confidence 57888888887 77899999999999999999999999999999888877765
No 38
>PRK07090 class II aldolase/adducin domain protein; Provisional
Probab=97.72 E-value=1.9e-05 Score=77.37 Aligned_cols=50 Identities=28% Similarity=0.254 Sum_probs=46.5
Q ss_pred cccchhhhhhHHHHHHHHhhhCccccccceEEEe-------eecCcccC-cccccCCC
Q psy14071 364 AKGEKILRCKVAAVYRLMDLYGWTQNIQNHITVS-------TLNPLVLK-GNILQSNL 413 (414)
Q Consensus 364 s~~E~~~R~~LAa~yrl~~~~gw~~~i~~his~r-------l~n~~g~~-~~~~~~~~ 413 (414)
+++||.+|.+|+.++|.+...||..++++|||+| +|||+|+. +++|++++
T Consensus 25 ~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiS~R~~~~~~~lItPsG~~~~~lt~~Di 82 (260)
T PRK07090 25 KDSGWTLRQKLALTCRILFDAGHDSGLAGQITARAEAPGTYYTQRLGLGFDEITASNL 82 (260)
T ss_pred CHHHHHHHHHHHHHHHHHHHcCCcccCCceEEEEeCCCCEEEEeCCCCChhhCCHHHe
Confidence 5669999999999999999999999999999999 48999999 88999876
No 39
>PRK06486 hypothetical protein; Provisional
Probab=97.50 E-value=6.3e-05 Score=73.77 Aligned_cols=51 Identities=25% Similarity=0.330 Sum_probs=47.1
Q ss_pred ccccchhhhhhHHHHHHHHhhhCccccccceEEEe--------eecCcccC-cccccCCC
Q psy14071 363 YAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITVS--------TLNPLVLK-GNILQSNL 413 (414)
Q Consensus 363 ~s~~E~~~R~~LAa~yrl~~~~gw~~~i~~his~r--------l~n~~g~~-~~~~~~~~ 413 (414)
.+.+++++|.+|++++|.+...||+.++.+|||+| +|||.|.. +++++++|
T Consensus 20 ~~~~~~~~r~~l~~~~r~l~~~Gl~~gt~GNiSvR~~~~~~~~lITPsG~~~~~lt~eDl 79 (262)
T PRK06486 20 DSDAVAQARVDLAACFRAAARHGLEEGICNHFSAVLPGHDDLFLVNPYGYAFSEITASDL 79 (262)
T ss_pred CCHHHHHHHHHHHHHHHHHHHcCCccccCceEEEEecCCCCEEEEcCCCCCcccCcHHHe
Confidence 46778899999999999999999999999999999 49999999 88999986
No 40
>PRK07044 aldolase II superfamily protein; Provisional
Probab=97.34 E-value=0.00013 Score=71.10 Aligned_cols=52 Identities=38% Similarity=0.562 Sum_probs=48.0
Q ss_pred cccccchhhhhhHHHHHHHHhhhCccccccceEEEe--------eecCcccC-cccccCCC
Q psy14071 362 GYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITVS--------TLNPLVLK-GNILQSNL 413 (414)
Q Consensus 362 ~~s~~E~~~R~~LAa~yrl~~~~gw~~~i~~his~r--------l~n~~g~~-~~~~~~~~ 413 (414)
.++++||++|.+|+.++|.+...||..+..+|||+| +|+|.|.. ++++++++
T Consensus 9 ~~~~~~~~~r~~l~~~~r~l~~~Gl~~g~~GNiSvR~~~~~~~~lITpsG~~~~~l~~~di 69 (252)
T PRK07044 9 RVSPAEWQARVDLAAAYRLVALLGWDDLIYTHISARVPGEEHHFLINPYGLLFDEITASNL 69 (252)
T ss_pred cCCHHHHHHHHHHHHHHHHHHHcCCccccCcEEEEEccCCCCeEEEcCCCCChhhcCHHHe
Confidence 367889999999999999999999999999999999 59999999 88998875
No 41
>PRK06208 hypothetical protein; Provisional
Probab=96.06 E-value=0.0044 Score=61.29 Aligned_cols=49 Identities=31% Similarity=0.571 Sum_probs=43.1
Q ss_pred ccchh-hhhhHHHHHHHHhhhCccccccceEEEe--------eecCcccC-cccccCCC
Q psy14071 365 KGEKI-LRCKVAAVYRLMDLYGWTQNIQNHITVS--------TLNPLVLK-GNILQSNL 413 (414)
Q Consensus 365 ~~E~~-~R~~LAa~yrl~~~~gw~~~i~~his~r--------l~n~~g~~-~~~~~~~~ 413 (414)
.+|.+ ++.+|+.++|++...||.++..+|||+| +|+|.|.. +++|+++|
T Consensus 37 ~~~~~~~~~~l~~~~r~l~~~Gl~~g~~GNIS~R~~~~~~~~lITPsG~~~~~lt~eDi 95 (274)
T PRK06208 37 AEERLHRKQRLAAAFRLFARFGFDEGLAGHITARDPELPDHFWVNPLGVHFSQIKVSDL 95 (274)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccccCceEEEEccCCCCeEEEcCCCCChhhCcHHHe
Confidence 34544 6789999999999999999999999999 49999999 88998875
No 42
>PRK08324 short chain dehydrogenase; Validated
Probab=89.08 E-value=0.64 Score=51.52 Aligned_cols=135 Identities=13% Similarity=0.083 Sum_probs=93.7
Q ss_pred eEEEEEcCCCCEEEEccCCCC---ccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHHHHHHHHHhCCCccEEEecCChh
Q psy14071 108 HITARLNVDEEIFLVNPHGLL---YNEITASSLVKVDMRGDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPA 184 (414)
Q Consensus 108 hISvRv~~~~d~flInP~G~~---~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~iH~aIy~arPDv~aViH~H~~~ 184 (414)
..++|.+.+-..|+..|.... .+.+||++++++-...-+++. ++ .-.+|..+++..+++.+...-++.|
T Consensus 259 ~~~~~~~~~~~~f~~~~~~~~~~~~g~~~pdh~~rtk~~p~~~~~-------~~-~~~~~~~~~~~~~~~~~~~~~y~~y 330 (681)
T PRK08324 259 ILHFRDSDAVLEFVNSADLPRLAQLGTSTPDHFIRTKIRPLVLDA-------PP-AADLEALKARLEEAVAAYRADYAAY 330 (681)
T ss_pred eeEecCCHHHHHHhcCcchHHHHhcCCCCCceeeeecccceeecC-------Cc-cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 345554444467999998765 778899999988666555543 12 4567888888777766555555544
Q ss_pred HHHhhhccCCCccccHHHHHhCCeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHH
Q psy14071 185 VVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAA 264 (414)
Q Consensus 185 ~~A~S~~~~~L~pi~qea~~~g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~a 264 (414)
-...+.... | .-+.+...++|++|-|++++|.+..+|.......+++
T Consensus 331 ~~~~~~~~~---~------------------------------~~~~~~p~~~l~~g~g~~~~g~~~~~a~~~~d~~~~~ 377 (681)
T PRK08324 331 FERNKAADS---P------------------------------AMLDPNPRVVLIPGLGMFSFGKDKKTARVAADIYENA 377 (681)
T ss_pred HHhcccCCC---C------------------------------cccCCCCeEEEECCCceEEeCCCHHHhhhhHHHHHHH
Confidence 433321100 0 1133456899999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCCCCCCHH
Q psy14071 265 CEAQLKLMPAGLDNLVLIPED 285 (414)
Q Consensus 265 ceiql~A~a~G~~~l~~l~~e 285 (414)
++.-..+.+.| ....+++.
T Consensus 378 ~~~~~~a~~~~--~~~~l~~~ 396 (681)
T PRK08324 378 INVMRGAEAVG--RYEPLSEQ 396 (681)
T ss_pred HHHHhhhhhcC--CccCCChh
Confidence 99988888888 35556543
No 43
>KOG3189|consensus
Probab=48.24 E-value=57 Score=31.27 Aligned_cols=94 Identities=27% Similarity=0.358 Sum_probs=55.5
Q ss_pred hHHHhhhhccccccccccccccCCC-cccCCCCCCCCccCCCChhHH----------HHHHHHHHHHH-HHHHhCCcccc
Q psy14071 38 LQSISDMMGLQGQRLQSAHLFRSSN-CVVPINDIRGVESMGYAKGEK----------ILRCKVAAVYR-LMDLYGWTQNI 105 (414)
Q Consensus 38 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~pi~d~~g~e~~~~~~~e~----------~~R~~LAa~~R-ll~~~G~~~~~ 105 (414)
|+-+||+- +|--+ |+---|+++- -|.|| |- +++.+|+ .+|+++.++.| .++.+|++-.+
T Consensus 109 LrYlsdid-lPiKR-GtFiEFRNgMiNvsPI----GR---~cs~EER~eF~e~Dkk~~iR~K~v~~Lr~~F~~~gLtFSI 179 (252)
T KOG3189|consen 109 LRYLSDID-LPIKR-GTFIEFRNGMINVSPI----GR---NCSQEERNEFEELDKKHKIREKFVEALREEFADYGLTFSI 179 (252)
T ss_pred HHHHHhcC-Ccccc-cceEEecCCceecccc----cc---ccCHHHHHHHHHhhhhhhhHHHHHHHHHHHhcccCeeEEE
Confidence 66666653 34333 2222344322 26788 43 2444444 37899888877 57899999999
Q ss_pred cceEEEEEcCCCCEEEEccCCCCc----cCCCCCCEEEEeCCCCcccC
Q psy14071 106 QNHITARLNVDEEIFLVNPHGLLY----NEITASSLVKVDMRGDIIEP 149 (414)
Q Consensus 106 ~GhISvRv~~~~d~flInP~G~~~----~evtasdLv~Vd~dG~vv~~ 149 (414)
+|.||+-| =|.|+.+ ..+.++.+-.|..=|.....
T Consensus 180 GGQISfDv---------FP~GWDKtyCLqhle~dgf~~IhFFGDkT~~ 218 (252)
T KOG3189|consen 180 GGQISFDV---------FPKGWDKTYCLQHLEKDGFDTIHFFGDKTMP 218 (252)
T ss_pred CCeEEEee---------cCCCcchhHHHHHhhhcCCceEEEeccccCC
Confidence 99999854 3667643 34555545555555554433
No 44
>PF13406 SLT_2: Transglycosylase SLT domain; PDB: 1LTM_A 1D0L_A 1QDT_A 1D0K_A 1D0M_A 1QDR_A 1QUT_A 1QUS_A 4ANR_A.
Probab=40.21 E-value=45 Score=32.93 Aligned_cols=94 Identities=21% Similarity=0.204 Sum_probs=48.8
Q ss_pred ChhhHHHHHHHHHHHHHcCCCCchhhHHHhhhhcc----ccccccccccccCCCcccCCCCCCCCccCCCChhHHHHHHH
Q psy14071 13 SRLFREELERIIEIQMKDGSGSATLLQSISDMMGL----QGQRLQSAHLFRSSNCVVPINDIRGVESMGYAKGEKILRCK 88 (414)
Q Consensus 13 s~~f~~ele~~~~~~~~~g~~~~~~l~~~~~~~~~----~~~~~~~~~~~~~~~~~~pi~d~~g~e~~~~~~~e~~~R~~ 88 (414)
++-|+.||..+++-..+.+-+|..+.--.+=-|+. |++-..-+..+-+.|.+=+.++ .-.-
T Consensus 124 ~~~f~~EL~a~L~~~~~~~~~~~~l~GS~AGAmG~~QFmPSs~~~yavD~dgDG~~Dl~~s---------------~~DA 188 (262)
T PF13406_consen 124 ADFFRKELIAALKIADRGGIDPETLKGSWAGAMGQPQFMPSSYLKYAVDGDGDGRIDLWNS---------------PADA 188 (262)
T ss_dssp HHHHHHHHHHHHHHHHHCT--CCC-EE-TT--BTTTTB-HHHHHHH---TTSSS---TTT----------------HHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCChhhcCCCcccCcCCCCcCHHHHHHhCcCCCCCCCcCCCCC---------------HHHH
Confidence 35789999999999998887776541111111221 2211111112233343333322 3456
Q ss_pred HHHHHHHHHHhCCcccccceEEEEEcCCCCEEE
Q psy14071 89 VAAVYRLMDLYGWTQNIQNHITARLNVDEEIFL 121 (414)
Q Consensus 89 LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~fl 121 (414)
|+++...|..+||..+.-=-+-|++|..-+..+
T Consensus 189 iaS~ANyL~~~GW~~g~~~~~~v~~p~~~~~~~ 221 (262)
T PF13406_consen 189 IASIANYLKKHGWQPGEPWGREVRLPAGFDYAL 221 (262)
T ss_dssp HHHHHHHHHHTT--TT--SEEEEECSSCCCCCC
T ss_pred HHHHHHHHHHcCCCCCCceeEeeccCcCcchHh
Confidence 999999999999999877778888885444333
No 45
>KOG3988|consensus
Probab=38.07 E-value=21 Score=35.80 Aligned_cols=27 Identities=22% Similarity=0.294 Sum_probs=23.4
Q ss_pred CCCCchHHHHHHHHHhCCCccEEEecC
Q psy14071 155 GVNTATFSVHAAIHAARPDLKAIIHVA 181 (414)
Q Consensus 155 ~~~s~e~~iH~aIy~arPDv~aViH~H 181 (414)
++|.++.++-.|+..|+|||||==-|-
T Consensus 77 GVPRSGTTLMRAmLDAHPdVRCGeETr 103 (378)
T KOG3988|consen 77 GVPRSGTTLMRAMLDAHPDVRCGEETR 103 (378)
T ss_pred CCCCCchHHHHHHHhcCCCcccCccce
Confidence 489999999999999999999965443
No 46
>PF03681 UPF0150: Uncharacterised protein family (UPF0150); InterPro: IPR005357 This family of small proteins is uncharacterised. In Q9A3L8 from SWISSPROT this domain is found next to a DNA binding helix-turn-helix domain IPR002145 from INTERPRO, which suggests that this is some kind of ligand binding domain.; PDB: 2DSY_C 2YZT_A 3KWR_A.
Probab=36.49 E-value=34 Score=24.24 Aligned_cols=23 Identities=35% Similarity=0.575 Sum_probs=17.8
Q ss_pred EEEecCC-ceEEEcCCHHHHHHHH
Q psy14071 236 VLFLSNN-GAVCCGETVEEAFYNV 258 (414)
Q Consensus 236 vllLrNH-Gvl~~G~tv~eAf~~~ 258 (414)
++-...- |+++.|+|++||...+
T Consensus 15 ~~~~pdlpg~~t~G~t~eea~~~~ 38 (48)
T PF03681_consen 15 VAYFPDLPGCFTQGDTLEEALENA 38 (48)
T ss_dssp EEEETTCCTCEEEESSHHHHHHHH
T ss_pred EEEeCCccChhhcCCCHHHHHHHH
Confidence 3444555 9999999999998755
No 47
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=32.54 E-value=91 Score=34.75 Aligned_cols=55 Identities=24% Similarity=0.276 Sum_probs=45.9
Q ss_pred CCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHH
Q psy14071 231 GPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVR 287 (414)
Q Consensus 231 g~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~ 287 (414)
.+...++|+.+=|++.+|+|..+|--.....+.+.++-..|.+.| ....|++.+.
T Consensus 336 ~~~p~~~~~~~~g~~~~g~~~~~a~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 390 (676)
T TIGR02632 336 DPNPRVLLIPGVGMISFGKDKETARVAREFYVNAINVMRGAEAVS--EYVSLPEQEA 390 (676)
T ss_pred CCCCeEEEEcCcceEEecCCHHHhhhhHHHHHHHHHHHhhhhccc--ceecCchhhc
Confidence 345689999999999999999999998889999888888888777 4677776543
No 48
>PF08069 Ribosomal_S13_N: Ribosomal S13/S15 N-terminal domain; InterPro: IPR012606 Ribosomes are the particles that catalyse mRNA-directed protein synthesis in all organisms. The codons of the mRNA are exposed on the ribosome to allow tRNA binding. This leads to the incorporation of amino acids into the growing polypeptide chain in accordance with the genetic information. Incoming amino acid monomers enter the ribosomal A site in the form of aminoacyl-tRNAs complexed with elongation factor Tu (EF-Tu) and GTP. The growing polypeptide chain, situated in the P site as peptidyl-tRNA, is then transferred to aminoacyl-tRNA and the new peptidyl-tRNA, extended by one residue, is translocated to the P site with the aid the elongation factor G (EF-G) and GTP as the deacylated tRNA is released from the ribosome through one or more exit sites [, ]. About 2/3 of the mass of the ribosome consists of RNA and 1/3 of protein. The proteins are named in accordance with the subunit of the ribosome which they belong to - the small (S1 to S31) and the large (L1 to L44). Usually they decorate the rRNA cores of the subunits. Many ribosomal proteins, particularly those of the large subunit, are composed of a globular, surfaced-exposed domain with long finger-like projections that extend into the rRNA core to stabilise its structure. Most of the proteins interact with multiple RNA elements, often from different domains. In the large subunit, about 1/3 of the 23S rRNA nucleotides are at least in van der Waal's contact with protein, and L22 interacts with all six domains of the 23S rRNA. Proteins S4 and S7, which initiate assembly of the 16S rRNA, are located at junctions of five and four RNA helices, respectively. In this way proteins serve to organise and stabilise the rRNA tertiary structure. While the crucial activities of decoding and peptide transfer are RNA based, proteins play an active role in functions that may have evolved to streamline the process of protein synthesis. In addition to their function in the ribosome, many ribosomal proteins have some function 'outside' the ribosome [, ]. This domain is found at the N terminus of ribosomal S13 and S15 proteins. This domain is also identified as NUC021 [].; GO: 0003735 structural constituent of ribosome, 0006412 translation, 0005840 ribosome; PDB: 3U5C_N 3O30_G 3IZB_O 3O2Z_G 3U5G_N 2XZN_O 2XZM_O 3IZ6_O.
Probab=27.98 E-value=24 Score=27.14 Aligned_cols=21 Identities=29% Similarity=0.382 Sum_probs=19.2
Q ss_pred HHHHHHHHHHHHHcCCCCchh
Q psy14071 17 REELERIIEIQMKDGSGSATL 37 (414)
Q Consensus 17 ~~ele~~~~~~~~~g~~~~~~ 37 (414)
.||+|++|-...|+|..|+.+
T Consensus 30 ~~eVe~~I~klakkG~tpSqI 50 (60)
T PF08069_consen 30 PEEVEELIVKLAKKGLTPSQI 50 (60)
T ss_dssp HHHHHHHHHHHCCTTHCHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHh
Confidence 699999999999999999865
No 49
>COG3347 Uncharacterized conserved protein [Function unknown]
Probab=25.67 E-value=1.7e+02 Score=30.53 Aligned_cols=52 Identities=13% Similarity=0.065 Sum_probs=42.5
Q ss_pred CcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHH
Q psy14071 234 NKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVR 287 (414)
Q Consensus 234 ~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~ 287 (414)
..++|+++-|+++.|++...|--.-...+.+..+--.|.+.| ....+++.+.
T Consensus 338 P~viLipG~Gm~~~g~~~a~A~i~~d~~~~ai~v~~gA~~~g--~~~~l~e~e~ 389 (404)
T COG3347 338 PRVILIPGLGMLTAGKSAAGARIMGDLYEDAIAVVRGAEALG--YYTPLSEAEL 389 (404)
T ss_pred CcEEEecCCceeeeccchhhHHHHHHHHHHHHHHhhhhhhhc--ccccCchhhh
Confidence 578999999999999999999988888888887766676677 4677776643
No 50
>PF14226 DIOX_N: non-haem dioxygenase in morphine synthesis N-terminal; PDB: 3OOX_A 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=25.66 E-value=19 Score=29.97 Aligned_cols=37 Identities=14% Similarity=0.184 Sum_probs=21.2
Q ss_pred eeeecCCCC-CCcHHHHHHHHHHhCCCCcEEEecCCceE
Q psy14071 208 LSTHPFTGY-SRGDEEKERIVRNLGPNNKVLFLSNNGAV 245 (414)
Q Consensus 208 V~~~~y~g~-~~~~ee~~~la~~Lg~~~~vllLrNHGvl 245 (414)
||++|+... ....+.+++|.+++.. .-.+.|.|||+=
T Consensus 1 iPvIDls~~~~~~~~~~~~l~~A~~~-~GFf~l~nhGi~ 38 (116)
T PF14226_consen 1 IPVIDLSPDPADREEVAEQLRDACEE-WGFFYLVNHGIP 38 (116)
T ss_dssp --EEEHGGCHHHHHHHHHHHHHHHHH-TSEEEEESSSSS
T ss_pred CCeEECCCCCccHHHHHHHHHHHHHh-CCEEEEeccccc
Confidence 466665530 0123456666667664 458899999963
No 51
>PF14165 YtzH: YtzH-like protein
Probab=24.48 E-value=88 Score=25.82 Aligned_cols=28 Identities=25% Similarity=0.392 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHcCCCCchh---hHHHhhh
Q psy14071 17 REELERIIEIQMKDGSGSATL---LQSISDM 44 (414)
Q Consensus 17 ~~ele~~~~~~~~~g~~~~~~---l~~~~~~ 44 (414)
||-+|+||++.|.+.+-++.+ |+.|.++
T Consensus 28 cEQieRLvksLm~n~~i~~~ik~~L~~Iy~y 58 (87)
T PF14165_consen 28 CEQIERLVKSLMANPNIDADIKQTLEEIYSY 58 (87)
T ss_pred HHHHHHHHHHHHcCCCcCHHHHHHHHHHHHH
Confidence 899999999999999877777 5555444
No 52
>COG1598 Predicted nuclease of the RNAse H fold, HicB family [General function prediction only]
Probab=23.85 E-value=99 Score=24.19 Aligned_cols=28 Identities=39% Similarity=0.447 Sum_probs=21.9
Q ss_pred ceEEEcCCHHHHHHHHHHHHHHHHHHHHHhc
Q psy14071 243 GAVCCGETVEEAFYNVYNLVAACEAQLKLMP 273 (414)
Q Consensus 243 Gvl~~G~tv~eAf~~~~~lE~aceiql~A~a 273 (414)
|+.+.|+|++||+. .++.|.+..+.++.
T Consensus 25 gc~s~G~T~eea~~---n~~eai~l~~e~~~ 52 (73)
T COG1598 25 GCHSQGETLEEALQ---NAKEAIELHLEALL 52 (73)
T ss_pred CccccCCCHHHHHH---HHHHHHHHHHHHHH
Confidence 78899999999986 55667777776643
Done!