Query psy14071
Match_columns 414
No_of_seqs 403 out of 1831
Neff 6.3
Searched_HMMs 29240
Date Fri Aug 16 18:50:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14071.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14071hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ocr_A Class II aldolase/adduc 100.0 2.2E-58 7.4E-63 449.6 29.0 242 77-344 26-271 (273)
2 2z7b_A MLR6791 protein; class 100.0 1.2E-50 4E-55 394.6 25.0 233 72-340 24-269 (270)
3 1e4c_P L-fuculose 1-phosphate 100.0 1.6E-47 5.4E-52 360.6 26.6 202 82-294 3-206 (215)
4 2opi_A L-fuculose-1-phosphate 100.0 1.7E-45 5.8E-50 346.1 24.2 194 84-294 5-206 (212)
5 1k0w_A L-ribulose 5 phosphate 100.0 1.8E-45 6.3E-50 349.9 20.7 204 84-294 4-222 (231)
6 2fk5_A Fuculose-1-phosphate al 100.0 9.4E-45 3.2E-49 338.5 18.5 181 83-276 3-191 (200)
7 2irp_A Putative aldolase class 100.0 3E-43 1E-47 329.6 20.5 189 78-275 5-207 (208)
8 2v9l_A Rhamnulose-1-phosphate 100.0 8.6E-43 2.9E-47 339.8 20.9 205 83-295 7-264 (274)
9 1pvt_A Sugar-phosphate aldolas 100.0 1.2E-42 4.2E-47 332.0 20.6 196 84-286 5-237 (238)
10 3m4r_A Uncharacterized protein 100.0 3.2E-39 1.1E-43 305.7 14.4 175 88-275 19-221 (222)
11 3ocr_A Class II aldolase/adduc 98.7 6.8E-09 2.3E-13 100.7 4.1 52 362-413 26-86 (273)
12 2z7b_A MLR6791 protein; class 97.2 0.00015 5E-09 70.0 3.7 56 357-413 24-91 (270)
13 3m4r_A Uncharacterized protein 85.4 0.49 1.7E-05 43.9 3.3 16 398-413 59-75 (222)
14 2kyg_A CAMP-dependent protein 25.2 63 0.0022 22.5 3.3 37 8-46 7-43 (50)
15 4anr_A Soluble lytic transglyc 24.9 1.2E+02 0.0042 29.5 6.4 86 13-115 145-236 (323)
16 1odm_A Isopenicillin N synthas 23.6 72 0.0025 30.6 4.6 49 207-261 8-61 (331)
17 2izy_A CAMP-dependent protein 20.5 1E+02 0.0034 21.9 3.6 37 8-46 2-38 (54)
No 1
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=100.00 E-value=2.2e-58 Score=449.65 Aligned_cols=242 Identities=39% Similarity=0.618 Sum_probs=220.7
Q ss_pred CCChhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCC
Q psy14071 77 GYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGV 156 (414)
Q Consensus 77 ~~~~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~ 156 (414)
.++++||++|++|+++||+++++||+++++||||+|+++++++|||||+|+.|++++++||++||++|+++++. +++.+
T Consensus 26 ~~~~~e~~~R~~la~~~r~l~~~G~~~~~~GNiS~R~~~~~~~flItPsG~~~~~lt~~dlv~vdldG~~v~g~-~~~~~ 104 (273)
T 3ocr_A 26 RVSPQEWEVRVKLAAAYRLAALKRWTDHIYTHFSARVPGPDEHFLINAFGLLFDEITASNLVKVDIDGTIVDDP-TGLGI 104 (273)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHTTCCBTTBCCEEEECSSSSCEEEECCTTCCGGGCCGGGCEEEETTCCEEECT-TSCCC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHCCCccCCCcEEEEEecCCCCEEEEeCCCCChhhCCccCEEEEeCCCCCccCC-CCCCC
Confidence 48899999999999999999999999999999999999877899999999999999999999999999999873 23468
Q ss_pred CCchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhCCeeeecCCCCCCcHHHHHHHHHHhCCCCc
Q psy14071 157 NTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLGELSTHPFTGYSRGDEEKERIVRNLGPNNK 235 (414)
Q Consensus 157 ~s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g~V~~~~y~g~~~~~ee~~~la~~Lg~~~~ 235 (414)
||+||.||++||++|||++||+|+||++++|+|+++++++|++++++ ++|+|+|+||.+++.+.+++++++++|++ ++
T Consensus 105 psse~~iH~~Iy~~rpdv~aVvHtHs~~a~a~s~~~~~l~p~~~~~~~~~g~v~~~~y~~~~~~~el~~~i~~~l~~-~~ 183 (273)
T 3ocr_A 105 NYAGYVIHSAIHAARHDLQAVLHTHTRDGIAVSAQKDGLLPISQHSIAFSGRVAYHGYEGIALDLSERERLVADLGD-KS 183 (273)
T ss_dssp CTTTTHHHHHHHHHCTTCCEEEEECCHHHHHHHTSTTCSCSCSHHHHTTTTTEEEECCCCSSCCHHHHHHHHHHHTT-CS
T ss_pred CChHHHHHHHHHHhCCCCcEEEEcCChHHHHHHHccCCCCCccHHHHHhCCCEEEECCCCCCCCHHHHHHHHHHhCc-CC
Confidence 99999999999999999999999999999999999999999999987 77999999999998788999999999996 79
Q ss_pred EEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcCCCCCCCCCCCCCCCchhhH
Q psy14071 236 VLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCPEGAIPAGTNSPTPAVLE 315 (414)
Q Consensus 236 vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (414)
++||+|||+++||+|+++||.+++.||++|++|+.|+++|..++..||+++++++++++.....
T Consensus 184 avlL~nHG~~~~G~tl~eA~~~~~~lE~~a~i~l~a~~~G~~~~~~l~~~~~~~~~~~~~~~~~---------------- 247 (273)
T 3ocr_A 184 VMILRNHGLLTGGVSVEHAIQQLHALEYACNIQIAAQSAGNAELVFPPREVIAKVEEQAKAIKD---------------- 247 (273)
T ss_dssp EEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHGGGCGGGCCCCCHHHHHHHHHHHHCC------------------
T ss_pred EEEEcCCceEEecCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHHHhcccc----------------
Confidence 9999999999999999999999999999999999999998335889999999999988743211
Q ss_pred hhhhhhccc---hhhHHHHHHhhhhcCCCCCC
Q psy14071 316 KKEKRWRIG---GMEFEALMRMLDNAKIPTGY 344 (414)
Q Consensus 316 ~~~~~w~~g---~~~feal~R~ld~~g~rTgy 344 (414)
..| +++|+||+|+||+.+ ++|
T Consensus 248 ------~~~~~~~~~w~a~~r~l~~~~--p~~ 271 (273)
T 3ocr_A 248 ------GNGPGVARHWNALIRELERSG--TDY 271 (273)
T ss_dssp ------CCSHHHHHHHHHHHHHHHTTC--SGG
T ss_pred ------cccchhhhhHHHHHHHHhccC--CCc
Confidence 123 689999999999986 454
No 2
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=100.00 E-value=1.2e-50 Score=394.60 Aligned_cols=233 Identities=17% Similarity=0.260 Sum_probs=199.4
Q ss_pred CCccCCCChhH----HHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcc
Q psy14071 72 GVESMGYAKGE----KILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDII 147 (414)
Q Consensus 72 g~e~~~~~~~e----~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv 147 (414)
|.|...|.++| +++|++|++++|+++.+||+++ +||||+|+++++++|||||+| .|++++++||++||++|+ +
T Consensus 24 ~~~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~Gl~~~-~GNiSvR~~~~~~~~lItpsg-~~~~l~~~dlv~vd~dG~-~ 100 (270)
T 2z7b_A 24 VLEENLYFQGSFTMRRKVFEELVTATKILLNEGIMDT-FGHISARDPEDPASFFLAQKL-APSLITVDDIQRFNLDGE-T 100 (270)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHTTCCCS-SCEEEEECTTCTTEEEEECSS-CGGGCCGGGEEEEETTSC-C
T ss_pred ccchhhhhhccHHHHHHHHHHHHHHHHHHHHCCCcCC-ceeEEEEecCCCCEEEEeCCC-ChhhCCcccEEEECCCCC-c
Confidence 77888888888 8899999999999999999997 899999999766899999998 799999999999999999 5
Q ss_pred cCCCCCCCCCCchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHh-CCeeeecCC---C-----CCC
Q psy14071 148 EPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVL-GELSTHPFT---G-----YSR 218 (414)
Q Consensus 148 ~~~~~~~~~~s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~-g~V~~~~y~---g-----~~~ 218 (414)
+++ .+||+|+.+|++||++|||++||+|+||++++|+|+++++|+|++++++++ ++||++||. | ...
T Consensus 101 ~g~----~~pSsE~~lH~~Iy~~rpdv~aVvHtHs~~a~a~s~~~~~l~~~~~~~~~~g~~vpv~~y~~~~g~~~~~~~~ 176 (270)
T 2z7b_A 101 SDN----RPSYLERYIHSEIYKTRPDVQCVLHTHSPAVLPYCFVDTPLRPVTHMGAFIGESVPVYEIRDKHGDETDLFGG 176 (270)
T ss_dssp SCC----SCCCTTHHHHHHHHHHCTTCCEEEEECCTTTGGGGSSSSCCCCCSGGGGGGCSCCCEECTHHHHCSCSCCCCC
T ss_pred CCC----CCCChhHHHHHHHHHhCCCCeEEEeeCCHHHHHHHhcCCCCCCccHHHHHhCCCCceecccccCCcccccccC
Confidence 432 469999999999999999999999999999999999999999999988765 579999974 3 334
Q ss_pred cHHHHHHHHHHhCCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhhcCCC
Q psy14071 219 GDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSSRVCP 298 (414)
Q Consensus 219 ~~ee~~~la~~Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~~~~~ 298 (414)
++++++++++.|++ .+++||+|||+++||+|+++||++++.+|++|++|+.|+++|. +.+|++++++++.++.
T Consensus 177 s~ela~~ia~~l~~-~~avLL~nHG~~~~G~tl~eA~~~~~~lE~~a~i~l~a~~~G~--~~~l~~e~~~~~~~~~---- 249 (270)
T 2z7b_A 177 SPDVCADIAESLGS-QTVVLMARHGVVNVGKSVREVVFRAFYLEQEAAALTAGLKIGN--VKYLSPGEIKTAGKLV---- 249 (270)
T ss_dssp SHHHHHHHHHHHTT-SSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTSC--CCCCCHHHHHHHTTCC----
T ss_pred CHHHHHHHHHHhcc-CCEEEEcCCceEEEeCCHHHHHHHHHHHHHHHHHHHHHHhcCC--CcCCCHHHHHHHHHHh----
Confidence 68999999999997 6899999999999999999999999999999999999999994 5789999998776431
Q ss_pred CCCCCCCCCCCCchhhHhhhhhhccchhhHHHHHHhhhhcCC
Q psy14071 299 EGAIPAGTNSPTPAVLEKKEKRWRIGGMEFEALMRMLDNAKI 340 (414)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~~~w~~g~~~feal~R~ld~~g~ 340 (414)
. ..++++|++|+|+||+.|+
T Consensus 250 --~--------------------~~~~~~w~~~~r~l~~~~~ 269 (270)
T 2z7b_A 250 --G--------------------AQIDRGWNHWSQRLRQAGL 269 (270)
T ss_dssp --S--------------------THHHHHHHHHHHHHHHTTC
T ss_pred --c--------------------chhHhHHHHHHHHHHhcCC
Confidence 0 1257899999999999876
No 3
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=100.00 E-value=1.6e-47 Score=360.63 Aligned_cols=202 Identities=19% Similarity=0.317 Sum_probs=186.2
Q ss_pred HHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchH
Q psy14071 82 EKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATF 161 (414)
Q Consensus 82 e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~ 161 (414)
++++|++|++++|.++.+||+++++||||+|++ +.|||||+|+.|++++++||++||++|+++++. .||+|+
T Consensus 3 ~~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~---~~~lItpsG~~~~~l~~~dlv~vd~~G~~~~g~-----~pSse~ 74 (215)
T 1e4c_P 3 RNKLARQIIDTCLEMTRLGLNQGTAGNVSVRYQ---DGMLITPTGIPYEKLTESHIVFIDGNGKHEEGK-----LPQSEW 74 (215)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCTTCCEEEEEET---TEEEECCTTCCGGGCCGGGCEEECTTCCBCTTC-----CCCTTH
T ss_pred HHHHHHHHHHHHHHHHHCcCCCCCCCeEEEEeC---CcEEEeCCCCCcccCCHHHEEEEcCCCCCCCCC-----CCChHH
Confidence 456899999999999999999999999999997 479999999999999999999999999999863 389999
Q ss_pred HHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhC--CeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEe
Q psy14071 162 SVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLG--ELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFL 239 (414)
Q Consensus 162 ~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g--~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllL 239 (414)
.+|++||++|||++||+|+||++++|+|+++.+++|+++..+++| +||+.+|..++. .++++++++.|++ .+++||
T Consensus 75 ~lH~~iy~~rpdv~aVvHtHs~~~~a~s~~~~~l~~~~~~~~~~~~~~ip~~~y~~~g~-~~la~~i~~~l~~-~~avll 152 (215)
T 1e4c_P 75 RFHMAAYQSRPDANAVVHNHAVHCTAVSILNRSIPAIHYMIAAAGGNSIPCAPYATFGT-RELSEHVALALKN-RKATLL 152 (215)
T ss_dssp HHHHHHHHHCTTCCEEEEECCHHHHHHHHHTCCBCSSSGGGGGGTSSCBCEECCCCTTC-HHHHHHHHHHTSS-CSEEEE
T ss_pred HHHHHHHHhCCCCCEEEEcCcHHHHHHHHhCCCCCcccHHHHHhCCCCcceeeCCCCCc-HHHHHHHHHHhcc-CCEEEE
Confidence 999999999999999999999999999999999999877666555 699999988875 6899999999996 689999
Q ss_pred cCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q psy14071 240 SNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSS 294 (414)
Q Consensus 240 rNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~ 294 (414)
+|||+++||+|+++||++++.+|++|++|+.++++|. ++..|++|+++++.+.+
T Consensus 153 ~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~a~~~g~-~~~~l~~~~~~~~~~~~ 206 (215)
T 1e4c_P 153 QHHGLIACEVNLEKALWLAHEVEVLAQLYLTTLAITD-PVPVLSDEEIAVVLEKF 206 (215)
T ss_dssp TTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTCS-SCCCCCHHHHHHHHHHC
T ss_pred cCCCcEEEeCCHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999995 34789999999888765
No 4
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=100.00 E-value=1.7e-45 Score=346.07 Aligned_cols=194 Identities=14% Similarity=0.206 Sum_probs=174.3
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeC-CCCcccCCCCCCCCCCchHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDM-RGDIIEPGTTNFGVNTATFS 162 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~-dG~vv~~~~~~~~~~s~e~~ 162 (414)
+.|++|++++|+++.+||+++++||||+|+++ .|||||+|+.|++++++||++||+ +|+++++. +||+|+.
T Consensus 5 ~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~---~~lItpsG~~~~~l~~~dlv~vd~~~G~~~~g~-----~pSse~~ 76 (212)
T 2opi_A 5 EHIELFLAQAHRYGDAKLMLCSSGNLSWRIGE---EALISGTGSWVPTLAKEKVSICNIASGTPTNGV-----KPSMEST 76 (212)
T ss_dssp HHHHHHHHHHHHHHHTTSSCTTCCEEEEEETT---EEEEEBTTCCGGGCCGGGEEEEETTTCCBSSSC-----CBCTTHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCCeEEEEeCC---eEEEeCCCCChhHCCCCcEEEEECCCCCCCCCC-----CCChhHH
Confidence 57999999999999999999999999999974 699999999999999999999999 99999862 5899999
Q ss_pred HHHHHHHhCCCccEEEecCChhHHHhhhcc------CCCccccHHHHHhC-CeeeecCCCCCCcHHHHHHHHHHhCCCCc
Q psy14071 163 VHAAIHAARPDLKAIIHVATPAVVAVSSLK------CGLLPLSRESVVLG-ELSTHPFTGYSRGDEEKERIVRNLGPNNK 235 (414)
Q Consensus 163 iH~aIy~arPDv~aViH~H~~~~~A~S~~~------~~L~pi~qea~~~g-~V~~~~y~g~~~~~ee~~~la~~Lg~~~~ 235 (414)
+|++||++|||++||+|+||++++|+|+++ ..++|+ ++++| +||++||.+++. .++++++++.|++ ++
T Consensus 77 lH~~iy~~rpdv~aVvHtHs~~~~a~s~~~~~~~~~~~lp~~---~~~~g~~v~~~~y~~~g~-~~la~~i~~~l~~-~~ 151 (212)
T 2opi_A 77 FHLGVLRERPDVNVVLHFQSEYATAISCMKNKPTNFNVTAEI---PCHVGSEIPVIPYYRPGS-PELAKAVVEAMLK-HN 151 (212)
T ss_dssp HHHHHHHHCTTCCEEEEECCHHHHHHHHBSSCCSCCCCSTHH---HHHTCSCCCEECCCCTTC-HHHHHHHHHHTSS-CS
T ss_pred HHHHHHHhCCCCCEEEEeCcHHHHHHHhcCccccccccCchH---HHHhCCCeEEEcCCCCCc-HHHHHHHHHHhcc-CC
Confidence 999999999999999999999999999998 455555 55677 899999998874 7899999999996 68
Q ss_pred EEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q psy14071 236 VLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSS 294 (414)
Q Consensus 236 vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~ 294 (414)
++||+|||+++||+|+++||++++.+|++|++|+.| .| .+..|++|+++++.+.+
T Consensus 152 avll~nHG~~~~G~t~~eA~~~~~~lE~~a~~~~~a--~g--~~~~l~~~~~~~~~~~~ 206 (212)
T 2opi_A 152 SVLLTNHGQVVCGKDFDQVYERATFFEMACRIIVQS--GG--DYSVLTPEEIEDLEIYV 206 (212)
T ss_dssp EEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHT--TT--CCCCCCHHHHHHCC---
T ss_pred EEEEcCCCcEEEcCCHHHHHHHHHHHHHHHHHHHHh--cC--CCCCCCHHHHHHHHHHh
Confidence 999999999999999999999999999999999998 45 34679999998776544
No 5
>1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A
Probab=100.00 E-value=1.8e-45 Score=349.95 Aligned_cols=204 Identities=14% Similarity=0.178 Sum_probs=178.0
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCC-CCcccCCCCCCCCCCchHH
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMR-GDIIEPGTTNFGVNTATFS 162 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~d-G~vv~~~~~~~~~~s~e~~ 162 (414)
++|++|++++|.++.+||+++++||||+|+++ +++|||||+|+.|++++++||++||++ |++++++ .+||+|+.
T Consensus 4 ~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~-~~~~~ItpsG~~~~~l~~~dlv~vd~~~G~~v~g~----~~pSse~~ 78 (231)
T 1k0w_A 4 DLKRQVLEANLALPKHNLVTLTWGNVSAVDRE-RGVFVIKPSGVDYSIMTADDMVVVSIETGEVVEGA----KKPSSDTP 78 (231)
T ss_dssp HHHHHHHHHHHHHHHTTCCCTTCCEEEEEETT-TTEEEECBSSCCTTTCCGGGCEEEETTTCCEEECS----SCBCTTHH
T ss_pred HHHHHHHHHHHHHHHCCCCCCCCceEEEEeCC-CCEEEEeCCCCChhhCCHhHEEEEECCCCCCCCCC----CCCChhHH
Confidence 68999999999999999999999999999985 579999999999999999999999999 9999863 36899999
Q ss_pred HHHHHHHhCCCccEEEecCChhHHHhhhccCCCccc-cHHHH-HhCCeee----------ecCCCCCCcHHHHHHHHHHh
Q psy14071 163 VHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPL-SRESV-VLGELST----------HPFTGYSRGDEEKERIVRNL 230 (414)
Q Consensus 163 iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi-~qea~-~~g~V~~----------~~y~g~~~~~ee~~~la~~L 230 (414)
+|++||++|||++||+|+||++++|||+++.+++|+ +++++ ++|+||+ .||..++ ..++++.+.+.+
T Consensus 79 lH~~iy~~rpdv~aVvHtHs~~a~a~s~~~~~l~~~~~~~~~~~~g~vp~~~~~~~~~i~~~y~~~g-~~~La~~~~~~~ 157 (231)
T 1k0w_A 79 THRLLYQAFPSIGGIVHTHSRHATIWAQAGQSIPATGTTHANYFYGTIPCTRKMTDAEINGEYEWET-GNVIVETFEKQG 157 (231)
T ss_dssp HHHHHHHHCTTCCEEEECCCHHHHHHHHHTCCBCCCSHHHHTTCSSCBCBCCCCCHHHHHSSHHHHH-HHHHHHHHHHTT
T ss_pred HHHHHHHhCCCCCEEEEeCcHHHHHHHHhCCCCCCccHHHHHHhCCCceeeccccccccccCcCCCC-hHHHHHHHHHhh
Confidence 999999999999999999999999999999999998 77776 5688998 5554433 234555554321
Q ss_pred CC--CCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhh
Q psy14071 231 GP--NNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDVRKEIYDSS 294 (414)
Q Consensus 231 g~--~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~~~~~~~~~ 294 (414)
.+ ..+++||+|||+++||+|+++||++++.+|++|++|+.++++|. ++..++++++++++..+
T Consensus 158 ~~~l~~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~a~~~g~-~~~~l~~~~~~~~~~~~ 222 (231)
T 1k0w_A 158 IDAAQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAP-QLPDMQQTLLNKHYLRK 222 (231)
T ss_dssp CCTTTCCEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHHHHCT-TCCCCCHHHHHHHHHHC
T ss_pred hccccCCEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCHHHHHHHHHHH
Confidence 11 36899999999999999999999999999999999999999985 47889999999887754
No 6
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=100.00 E-value=9.4e-45 Score=338.51 Aligned_cols=181 Identities=21% Similarity=0.217 Sum_probs=170.6
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCCCchHH
Q psy14071 83 KILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVNTATFS 162 (414)
Q Consensus 83 ~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~s~e~~ 162 (414)
+++|++|++++|.++.+||+++++||||+|+ +++|||||+|..|++++++||++||++|+++ . +||+|+.
T Consensus 3 ~~~r~~l~~~~r~l~~~Gl~~~~~GNiS~R~---~~~~lItpsG~~~~~l~~~dlv~vd~~G~~~-~------~pSsE~~ 72 (200)
T 2fk5_A 3 ARLYAAFRQVGEDLFAQGLISATAGNFSVRT---KGGFLITKSGVQKARLTPEDLLEVPLEGPIP-E------GASVESV 72 (200)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCTTCCEEEEEC---SSEEEEEBTTCCGGGCCGGGEEEEESSSCCC-T------TBCTTHH
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEE---CCEEEEeCCCCCcccCCcccEEEEeCCCCCc-c------CCChhHH
Confidence 4689999999999999999999999999999 3799999999999999999999999999988 2 4899999
Q ss_pred HHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHH-HhCCeeee-cCCCCCCcHHHHHHHHHHhCCCCcEEEec
Q psy14071 163 VHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESV-VLGELSTH-PFTGYSRGDEEKERIVRNLGPNNKVLFLS 240 (414)
Q Consensus 163 iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~-~~g~V~~~-~y~g~~~~~ee~~~la~~Lg~~~~vllLr 240 (414)
+|.+||++ ||++||+|+||++++++|+++++++|++++++ ++|+||++ ||..++. +++++++++.|++ ++++||+
T Consensus 73 ~H~~iy~~-pdv~aVvHtHs~~a~a~s~~~~~l~~~~~~~~~~~~~ip~~~~y~~~g~-~ela~~i~~~l~~-~~avll~ 149 (200)
T 2fk5_A 73 VHREVYRR-TGARALVHAHPRVAVALSFHLSRLRPLDLEGQHYLKEVPVLAPKTVSAT-EEAALSVAEALRE-HRACLLR 149 (200)
T ss_dssp HHHHHHHH-SCCSEEEEECCHHHHHHHTTCSEECCSSHHHHHHTSCEEEECCSCCSSS-HHHHHHHHHHHHH-CSEEEET
T ss_pred HHHHHHhC-CCCCEEEecCCHHHHHHHhcCCCCCCccHHHHHhCCCceEecCCCCCCc-HHHHHHHHHHhCc-CCEEEEC
Confidence 99999999 99999999999999999999999999999987 66899999 9998884 7899999999986 6899999
Q ss_pred CCceEEEc------CCHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14071 241 NNGAVCCG------ETVEEAFYNVYNLVAACEAQLKLMPAGL 276 (414)
Q Consensus 241 NHGvl~~G------~tv~eAf~~~~~lE~aceiql~A~a~G~ 276 (414)
|||+++|| +|+++||++++.+|++|++|+.+++.|.
T Consensus 150 nHG~~~~G~~~~~~~~~~eA~~~~~~lE~~a~~~~~a~~~g~ 191 (200)
T 2fk5_A 150 GHGAFAVGLKEAPEEALLEAYGLMTTLEESAQILLYHRLWQG 191 (200)
T ss_dssp TTEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEeCCCCCcCcHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 99999999 9999999999999999999999998874
No 7
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=100.00 E-value=3e-43 Score=329.62 Aligned_cols=189 Identities=17% Similarity=0.262 Sum_probs=166.5
Q ss_pred CChhHHHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCCEEEEccCCCCccCCCCCCEEEEeCCCCcccCCCCCCCCC
Q psy14071 78 YAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPGTTNFGVN 157 (414)
Q Consensus 78 ~~~~e~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d~flInP~G~~~~evtasdLv~Vd~dG~vv~~~~~~~~~~ 157 (414)
+.++++++|++|++++|.++.+||+++++||||+|+++ ++|||||+|+.|++++++||++||++|+++ ++ .+|
T Consensus 5 ~~~~~~~~r~~l~~~~r~l~~~gl~~~~~GNiS~R~~~--~~~~ItpsG~~~~~l~~~dlv~vd~~g~~v-~~----~~p 77 (208)
T 2irp_A 5 LFKKFSEKVEEIIEAGRILHSRGWVPATSGNISAKVSE--EYIAITASGKHKGKLTPEDILLIDYEGRPV-GG----GKP 77 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCSGGGCCEEEEECSS--SEEEEECTTSCGGGCCGGGEEEEETTSCBT-TS----CCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCeEEEEeCC--CEEEEecCCCCcccCCcccEEEEcCCCCCC-CC----CCC
Confidence 34567789999999999999999999999999999985 689999999999999999999999999998 43 368
Q ss_pred CchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCC--CccccHHHH-Hh-C--------CeeeecCCCCCCcHHHHHH
Q psy14071 158 TATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCG--LLPLSRESV-VL-G--------ELSTHPFTGYSRGDEEKER 225 (414)
Q Consensus 158 s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~--L~pi~qea~-~~-g--------~V~~~~y~g~~~~~ee~~~ 225 (414)
|+|+.+|.+||++|||++||+|+||++++|+|+++++ +++..++.+ .+ | .||+++|. +. .+++++.
T Consensus 78 Sse~~lH~~iy~~rpdv~aVvHtHs~~a~a~s~~~~~~~lp~~~~~~~~~~~g~~~~~~~~~vp~~~~~-~g-~~~La~~ 155 (208)
T 2irp_A 78 SAETLLHTTVYKLFPEVNAVVHTHSPNATVISIVEKKDFVELEDYELLKAFPDIHTHEVKIKIPIFPNE-QN-IPLLAKE 155 (208)
T ss_dssp CHHHHHHHHHHHHCTTCCEEEEECCHHHHHHHHHCCSSEEECCCHHHHTTCTTCCCSCSSCEEEEECCC-SC-HHHHHHH
T ss_pred CccHHHHHHHHHhCCCCCEEEecCCHHHHHHHhhcCCCCCCccHHHHHHHhCCccccccccceeeecCC-CC-HHHHHHH
Confidence 9999999999999999999999999999999999863 443345444 44 3 79999986 44 3688999
Q ss_pred HHHHhCCC--CcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14071 226 IVRNLGPN--NKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAG 275 (414)
Q Consensus 226 la~~Lg~~--~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G 275 (414)
+++.|++. .+++||+|||+++||+|+++||++++.+|++|++++.+++.|
T Consensus 156 i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~~~~~g 207 (208)
T 2irp_A 156 VENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTEALEFIFECELKLLSFH 207 (208)
T ss_dssp HHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999742 359999999999999999999999999999999999999877
No 8
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=100.00 E-value=8.6e-43 Score=339.84 Aligned_cols=205 Identities=18% Similarity=0.231 Sum_probs=180.9
Q ss_pred HHHHHHHHHHHHHHHHhCCcccccceEEEEEcCCC--------------------------CEEEEccCCCCccCC--CC
Q psy14071 83 KILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDE--------------------------EIFLVNPHGLLYNEI--TA 134 (414)
Q Consensus 83 ~~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~--------------------------d~flInP~G~~~~ev--ta 134 (414)
.++|++|++++|.++++||+++++||||+|+++++ ++|||||+|..|+++ ++
T Consensus 7 ~~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lItpSG~~~~~l~~~p 86 (274)
T 2v9l_A 7 SWFVQGMIKATTDAWLKGWDERNGGNLTLRLDDADIAPYHDNFHQQPRYIPLSQPMPLLANTPFIVTGSGKFFRNVQLDP 86 (274)
T ss_dssp SHHHHHHHHHHHHHHHTTCCCTTCEEEEEECCHHHHGGGGGGSCSSCEEEECSSCCGGGTTCEEEEEBTTCCGGGTTTCH
T ss_pred HHHHHHHHHHHHHHHHCCCccCCCceEEEEcCCCCcccccccccccccccccccccccccCcEEEEeCCCCCHHHhcCCH
Confidence 46899999999999999999999999999997532 589999999999999 99
Q ss_pred CC---EEEEeCCCC---cc---cCCCCCCCCCCchHHHHHHHHHh-----CCCccEEEecCChhHHHhhhccCCCcc---
Q psy14071 135 SS---LVKVDMRGD---II---EPGTTNFGVNTATFSVHAAIHAA-----RPDLKAIIHVATPAVVAVSSLKCGLLP--- 197 (414)
Q Consensus 135 sd---Lv~Vd~dG~---vv---~~~~~~~~~~s~e~~iH~aIy~a-----rPDv~aViH~H~~~~~A~S~~~~~L~p--- 197 (414)
+| |++||.+|+ ++ +++ .+||+|+.+|.+||++ |||++||+|+||++++|+|+++. +++
T Consensus 87 ~d~~~iv~vd~dG~~~~~v~~~~~~----~~PSsE~~~H~~iy~~r~~~~rpd~~aVvHtHs~~~~a~s~~~~-l~~~~~ 161 (274)
T 2v9l_A 87 AANLGIVKVDSDGAGYHILWGLTNE----AVPTSELPAHFLSHCERIKATNGKDRVIMHCHATNLIALTYVLE-NDTAVF 161 (274)
T ss_dssp HHHEEEEEECTTSSEEEEEEECTTT----CCBCTTHHHHHHHHHHHHHHTTTCCCEEEEECCHHHHHHTTTSC-CCHHHH
T ss_pred hhCCcEEEEeCCCCeeeeeeccCCC----CCCCHHHHHHHHHHHhcccccCCCCeEEEECCcHHHHHHHccCc-cccccc
Confidence 98 999999999 55 443 4689999999999998 99999999999999999999977 431
Q ss_pred ------ccHHH-HHhC-CeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHH
Q psy14071 198 ------LSRES-VVLG-ELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQL 269 (414)
Q Consensus 198 ------i~qea-~~~g-~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql 269 (414)
+.+++ .++| .||++||..+++ .++++++++.|++ ++++||+|||+++||+|+++||.+++.+|++|++|+
T Consensus 162 ~~~~~~~~~e~~~~~g~~v~v~~y~~~g~-~ela~~i~~~l~~-~~avll~nHG~~~~G~~~~eA~~~~e~lE~~a~i~~ 239 (274)
T 2v9l_A 162 TRQLWEGSTECLVVFPDGVGILPWMVPGT-DAIGQATAQEMQK-HSLVLWPFHGVFGSGPTLDETFGLIDTAEKSAQVLV 239 (274)
T ss_dssp HHHHHHTSTTHHHHCTTCEEECCCCCSSS-HHHHHHHHHHHTT-CSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHH
T ss_pred cchhhhcchHHHHHcCCceeEecCCCCCC-HHHHHHHHHHHcc-CCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHH
Confidence 23454 3677 799999998874 7899999999996 689999999999999999999999999999999999
Q ss_pred HHhcCCCCCCCCCCHHHHHHHHHhhc
Q psy14071 270 KLMPAGLDNLVLIPEDVRKEIYDSSR 295 (414)
Q Consensus 270 ~A~a~G~~~l~~l~~e~~~~~~~~~~ 295 (414)
.+++.|. ++..|++++++++.+.+.
T Consensus 240 ~a~~~g~-~~~~l~~e~~~~~~~~~~ 264 (274)
T 2v9l_A 240 KVYSMGG-MKQTISREELIALGKRFG 264 (274)
T ss_dssp HHHHTTS-CSSCCCCC-HHHHHHHHT
T ss_pred HHHhcCC-CCCCCCHHHHHHHHHHhC
Confidence 9999985 367899999998888763
No 9
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=100.00 E-value=1.2e-42 Score=332.00 Aligned_cols=196 Identities=22% Similarity=0.318 Sum_probs=169.6
Q ss_pred HHHHHHHHHHHHHHHhCCcccccceEEEEEcCCCC-------------------EEEEccCCCCccCCC--CCCEEEEeC
Q psy14071 84 ILRCKVAAVYRLMDLYGWTQNIQNHITARLNVDEE-------------------IFLVNPHGLLYNEIT--ASSLVKVDM 142 (414)
Q Consensus 84 ~~R~~LAa~~Rll~~~G~~~~~~GhISvRv~~~~d-------------------~flInP~G~~~~evt--asdLv~Vd~ 142 (414)
.+|++|++++|.++.+||+++++||||+|++++++ +|||||+|+.|++++ ++||++|++
T Consensus 5 ~~~~~l~~~~r~l~~~Gl~~~~~GNiS~R~~~~~~~~~~~~~~~~~~~~~~~~l~~lItpsG~~~~~l~~p~~dl~~v~~ 84 (238)
T 1pvt_A 5 ETIREIQKVAYWLAIKGLSEANAGNISVRLDERPEGYEVKSVNEYGFDYDGPEMYLLITATGSRMREVYEDDSKICLLHV 84 (238)
T ss_dssp HHHHHHHHHHHHHHHTTSSBTTBEEEEEEESSCCSSCCCCEEEEEEEEECSCCEEEEEEBTTCCHHHHTTCGGGEEEEEE
T ss_pred HHHHHHHHHHHHHHHcCCcCCCCceEEEEcCCCcccccccccccccccccCcceEEEEcCCCCCHHhccCCcccEEEEEe
Confidence 68999999999999999999999999999987544 899999999999999 799887777
Q ss_pred C----CCcccCCCCCCCCCCchHHHHHHHHHh----CCCccEEEecCChhHHHhhhccC------CCccccHHHH-Hh-C
Q psy14071 143 R----GDIIEPGTTNFGVNTATFSVHAAIHAA----RPDLKAIIHVATPAVVAVSSLKC------GLLPLSRESV-VL-G 206 (414)
Q Consensus 143 d----G~vv~~~~~~~~~~s~e~~iH~aIy~a----rPDv~aViH~H~~~~~A~S~~~~------~L~pi~qea~-~~-g 206 (414)
| |++++++ ++||+|+.+|.+||++ |||++||+|+||++++|+|+++. .|+|+.+++. ++ +
T Consensus 85 d~~~~g~~v~g~----~~PSsE~~~H~~iy~~~~~~rpd~~aVvHtHs~~~~a~s~~~~l~~~~~~l~~~~~~~~~~~~~ 160 (238)
T 1pvt_A 85 LPGKHYEILHGN----GKPTSEFPTHLMIHAKFKEMNPEKKAIVHTHPLNLLTLMNLEEFQELLPKMMKIHPEVLIFFPQ 160 (238)
T ss_dssp CSEEEEEEEECS----SCBCTTHHHHHHHHHHHHHSCTTCCEEEEECCHHHHHHTTSGGGTTTHHHHTTSSHHHHHHCSS
T ss_pred cCCCCcceeCCC----CCCChHHHHHHHHHHhhhccCCCceEEEecCcHHHHHHHhcccchhhhccccccchHHHHHhCC
Confidence 6 6688753 2689999999999994 89999999999999999999876 3334455665 66 4
Q ss_pred CeeeecCCCCCCcHHHHHHHHHHhCCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCCCHHH
Q psy14071 207 ELSTHPFTGYSRGDEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAGLDNLVLIPEDV 286 (414)
Q Consensus 207 ~V~~~~y~g~~~~~ee~~~la~~Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G~~~l~~l~~e~ 286 (414)
+|+++||..++ +.++++++++.|++ ++++||+|||+++||+|+++||.+++.+|++|++|+.++++|. ++..||++.
T Consensus 161 ~v~~~~y~~~g-~~ela~~i~~~l~~-~~avll~nHG~~~~G~~~~eA~~~~~~lE~~a~~~~~a~~~g~-~~~~l~~~~ 237 (238)
T 1pvt_A 161 GISVVEFEKPG-SVELGLKTVEKSEG-KDAVLWDKHGVVAFGKDVAEAYDRVEILEKAAEILLRVLSLGR-NPTGVPEGW 237 (238)
T ss_dssp CCEEECCCSTT-CHHHHHHHHHHTSS-CSEEEETTSCEEEEESSHHHHHHHHHHHHHHHHHHHHHHTTTC-SCCC-----
T ss_pred CceEecCCCCC-cHHHHHHHHHHhcc-CCEEEEcCCCceEecCCHHHHHHHHHHHHHHHHHHHHHHHcCC-CCCCCCccc
Confidence 79999999887 47899999999996 6899999999999999999999999999999999999999986 477788763
No 10
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=100.00 E-value=3.2e-39 Score=305.75 Aligned_cols=175 Identities=15% Similarity=0.205 Sum_probs=149.2
Q ss_pred HHHHHHHHHH-HhCCcccccceEEEEEcCCC------CEEEEccCCCCccCCCCCCEEEEeCC-----------------
Q psy14071 88 KVAAVYRLMD-LYGWTQNIQNHITARLNVDE------EIFLVNPHGLLYNEITASSLVKVDMR----------------- 143 (414)
Q Consensus 88 ~LAa~~Rll~-~~G~~~~~~GhISvRv~~~~------d~flInP~G~~~~evtasdLv~Vd~d----------------- 143 (414)
++...+|++. ..||+.+++||||+|+++++ ++|||||+|+.|++++++||++||++
T Consensus 19 ~~v~~~~~lg~~~~l~~~t~GNiSvR~~~~~~~g~~~~~~~ItpSG~~~~~l~~~dlv~vdl~~l~~~~~~~~~~~~~~~ 98 (222)
T 3m4r_A 19 EVVYGSRLIGSDPDLVLHGGGNTSVKTTERDHAGRIISVLRVKNSGSNLGTIDSRGFTGIRMDDALAAAKIDKMTDEAMV 98 (222)
T ss_dssp HHHHHHHHHHTCTTTCC-CCCEEEEEEEEECTTSCEEEEEEEEBTTSCGGGCCGGGEEEEEHHHHHHGGGCSCCCHHHHH
T ss_pred HHHHHHHHhcccCCeeecCCCeEEEEeCCCccccCcCCEEEEeCCCCChhhCCHHHeEEEchhhhccccccccccchhhc
Confidence 3455555554 46889999999999998532 68999999999999999999999998
Q ss_pred ----CCcccCCCCCCCCCCchHHHHHHHHHhCCCccEEEecCChhHHHhhhccCCCccccHHHHHhCCeeeecCCCCCCc
Q psy14071 144 ----GDIIEPGTTNFGVNTATFSVHAAIHAARPDLKAIIHVATPAVVAVSSLKCGLLPLSRESVVLGELSTHPFTGYSRG 219 (414)
Q Consensus 144 ----G~vv~~~~~~~~~~s~e~~iH~aIy~arPDv~aViH~H~~~~~A~S~~~~~L~pi~qea~~~g~V~~~~y~g~~~~ 219 (414)
|++++++ ..+||+|+.+|.+||+ +||+|+||++++|+|++++++++ ...++|+|+++||.++++
T Consensus 99 ~~~~g~~v~~~---~~~pSsE~~lH~~iy~-----~aVvHtHs~~a~a~s~~~~~l~~---~~~~~g~v~~~~y~~~g~- 166 (222)
T 3m4r_A 99 DYLKKSMVNPS---EPSPSVETFLHAFLPY-----KFVMHSHADAILSITNTDLPSDQ---IAKILGNVVVLPYIPPGF- 166 (222)
T ss_dssp HHHHHTBSSTT---SCCBCTTHHHHHTSCS-----SEEEEECCHHHHHHHTSSCCHHH---HHHHHCSEEEECCCCSSH-
T ss_pred cccCCccccCC---CCCcchhHHHHHHHHh-----CEEEEeCCHHHHHHHhCCCcHHH---HHHHhCCceecCCcCCcH-
Confidence 8888763 2478999999999998 69999999999999999998855 345788899999999884
Q ss_pred HHHHHHHHHHhCCCCcEEEecCCceEEEcCCHHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14071 220 DEEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNLVAACEAQLKLMPAG 275 (414)
Q Consensus 220 ~ee~~~la~~Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~lE~aceiql~A~a~G 275 (414)
++++++++.|++..+++||+|||+++||+|+++||++++.+|++|++|+.|+++|
T Consensus 167 -ela~~i~~~l~~~~~avlL~nHG~~~~G~t~~eA~~~~~~lE~~a~~~l~a~~~G 221 (222)
T 3m4r_A 167 -TLAKEVMNCFKKGIDGIVLRKHGLLTFGDTGKEAYDRHINIVSRAENFIREKTDG 221 (222)
T ss_dssp -HHHHHHHHHCCTTCSEEEETTTEEEEEESSHHHHHHHHHHHHHHHHHHHC-----
T ss_pred -HHHHHHHHHHhcCCCEEEECCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 8999999999975589999999999999999999999999999999999999887
No 11
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=98.70 E-value=6.8e-09 Score=100.74 Aligned_cols=52 Identities=37% Similarity=0.496 Sum_probs=49.5
Q ss_pred cccccchhhhhhHHHHHHHHhhhCccccccceEEEe--------eecCcccC-cccccCCC
Q psy14071 362 GYAKGEKILRCKVAAVYRLMDLYGWTQNIQNHITVS--------TLNPLVLK-GNILQSNL 413 (414)
Q Consensus 362 ~~s~~E~~~R~~LAa~yrl~~~~gw~~~i~~his~r--------l~n~~g~~-~~~~~~~~ 413 (414)
.++++||++|++||++||+++.+||++++++|||+| ||||+|+. ++||+|+|
T Consensus 26 ~~~~~e~~~R~~la~~~r~l~~~G~~~~~~GNiS~R~~~~~~~flItPsG~~~~~lt~~dl 86 (273)
T 3ocr_A 26 RVSPQEWEVRVKLAAAYRLAALKRWTDHIYTHFSARVPGPDEHFLINAFGLLFDEITASNL 86 (273)
T ss_dssp HSCHHHHHHHHHHHHHHHHHHHTTCCBTTBCCEEEECSSSSCEEEECCTTCCGGGCCGGGC
T ss_pred cCCHHHHHHHHHHHHHHHHHHHCCCccCCCcEEEEEecCCCCEEEEeCCCCChhhCCccCE
Confidence 378999999999999999999999999999999999 69999999 88999987
No 12
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=97.24 E-value=0.00015 Score=69.99 Aligned_cols=56 Identities=14% Similarity=0.147 Sum_probs=42.1
Q ss_pred ccccccccccc----hhhhhhHHHHHHHHhhhCccccccceEEEe--------eecCcccCcccccCCC
Q psy14071 357 GVESMGYAKGE----KILRCKVAAVYRLMDLYGWTQNIQNHITVS--------TLNPLVLKGNILQSNL 413 (414)
Q Consensus 357 ~~~~~~~s~~E----~~~R~~LAa~yrl~~~~gw~~~i~~his~r--------l~n~~g~~~~~~~~~~ 413 (414)
+.++..|.++| +++|.+|++++|++...||.++ ++|||+| +|||.|..+++++++|
T Consensus 24 ~~~~~~~~~~~~~~~~~~r~~l~~~~r~l~~~Gl~~~-~GNiSvR~~~~~~~~lItpsg~~~~l~~~dl 91 (270)
T 2z7b_A 24 VLEENLYFQGSFTMRRKVFEELVTATKILLNEGIMDT-FGHISARDPEDPASFFLAQKLAPSLITVDDI 91 (270)
T ss_dssp ----------CHHHHHHHHHHHHHHHHHHHHTTCCCS-SCEEEEECTTCTTEEEEECSSCGGGCCGGGE
T ss_pred ccchhhhhhccHHHHHHHHHHHHHHHHHHHHCCCcCC-ceeEEEEecCCCCEEEEeCCCChhhCCcccE
Confidence 34555678888 8899999999999999999997 9999999 5999985588999875
No 13
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=85.43 E-value=0.49 Score=43.88 Aligned_cols=16 Identities=13% Similarity=0.092 Sum_probs=14.3
Q ss_pred eecCcccC-cccccCCC
Q psy14071 398 TLNPLVLK-GNILQSNL 413 (414)
Q Consensus 398 l~n~~g~~-~~~~~~~~ 413 (414)
+|||+|+. ++|++|+|
T Consensus 59 ~ItpSG~~~~~l~~~dl 75 (222)
T 3m4r_A 59 RVKNSGSNLGTIDSRGF 75 (222)
T ss_dssp EEEBTTSCGGGCCGGGE
T ss_pred EEeCCCCChhhCCHHHe
Confidence 49999999 88999986
No 14
>2kyg_A CAMP-dependent protein kinase type II-alpha regul subunit; protein/protein, homodimer bound to monomer, protein binding; NMR {Homo sapiens}
Probab=25.24 E-value=63 Score=22.45 Aligned_cols=37 Identities=11% Similarity=0.057 Sum_probs=30.2
Q ss_pred hhhccChhhHHHHHHHHHHHHHcCCCCchhhHHHhhhhc
Q psy14071 8 EMIMNSRLFREELERIIEIQMKDGSGSATLLQSISDMMG 46 (414)
Q Consensus 8 ~~il~s~~f~~ele~~~~~~~~~g~~~~~~l~~~~~~~~ 46 (414)
++|-..+-|.+.|+.++++-+++. |+++++..++++.
T Consensus 7 ~~~~ip~~l~~lL~~~~~evlr~q--P~Di~~Faa~yF~ 43 (50)
T 2kyg_A 7 SHIQIPPGLTELLQGYTVEVLRQQ--PPDLVEFAVEYFT 43 (50)
T ss_dssp CCCCCCTTHHHHHHHHHHHHHHHC--CSCHHHHHHHHHH
T ss_pred chhcCCccHHHHHHHHHHHHHHHC--CCCHHHHHHHHHH
Confidence 456677889999999999999976 7888888887763
No 15
>4anr_A Soluble lytic transglycosylase B; lyase, EF-hand like motif, peptidoglycan; 1.84A {Pseudomonas aeruginosa}
Probab=24.90 E-value=1.2e+02 Score=29.48 Aligned_cols=86 Identities=16% Similarity=0.210 Sum_probs=48.9
Q ss_pred ChhhHHHHHHHHHHHHHcCCCCchhh------HHHhhhhccccccccccccccCCCcccCCCCCCCCccCCCChhHHHHH
Q psy14071 13 SRLFREELERIIEIQMKDGSGSATLL------QSISDMMGLQGQRLQSAHLFRSSNCVVPINDIRGVESMGYAKGEKILR 86 (414)
Q Consensus 13 s~~f~~ele~~~~~~~~~g~~~~~~l------~~~~~~~~~~~~~~~~~~~~~~~~~~~pi~d~~g~e~~~~~~~e~~~R 86 (414)
++.|+.||...++--.+.+-+|..+. .-+..|| |+.-..-...+-+.|.+-|.|+ .-
T Consensus 145 ~~~F~~el~aaL~i~~~g~~~~~~~~GS~aGA~G~~QFm--Pst~~~ygvD~dgDG~~D~~~~---------------~~ 207 (323)
T 4anr_A 145 ADFFRKELREFLLLAREQQVDPLSLTGSYAGAMGLPQFM--PSSFRAYAVDFDGDGHINIWSD---------------PT 207 (323)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEECTTCCBTTTTBC--HHHHHHHCCCSSSSSCCCTTTC---------------HH
T ss_pred hHHHHHHHHHHHHHHHcCCCChhhcCCCcccCCCCcccC--HHHHHHhCCCCCCCCCcCCCCC---------------HH
Confidence 45789999999998877665654320 0011122 1211111111222332222222 33
Q ss_pred HHHHHHHHHHHHhCCcccccceEEEEEcC
Q psy14071 87 CKVAAVYRLMDLYGWTQNIQNHITARLNV 115 (414)
Q Consensus 87 ~~LAa~~Rll~~~G~~~~~~GhISvRv~~ 115 (414)
..|+++.+.|...||..+--=-.-|++|.
T Consensus 208 Dai~S~AnyL~~~GW~~g~pwg~eV~lp~ 236 (323)
T 4anr_A 208 DAIGSVASYFKQHGWVTGEPVVSVAEIND 236 (323)
T ss_dssp HHHHHHHHHHHHTTCCTTCCCEEEEEESS
T ss_pred HHHHHHHHHHHHcCCCCCCCeEEEEeCCC
Confidence 56999999999999998865557778774
No 16
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=23.59 E-value=72 Score=30.64 Aligned_cols=49 Identities=8% Similarity=0.086 Sum_probs=32.2
Q ss_pred CeeeecCCCCCC-cH----HHHHHHHHHhCCCCcEEEecCCceEEEcCCHHHHHHHHHHH
Q psy14071 207 ELSTHPFTGYSR-GD----EEKERIVRNLGPNNKVLFLSNNGAVCCGETVEEAFYNVYNL 261 (414)
Q Consensus 207 ~V~~~~y~g~~~-~~----ee~~~la~~Lg~~~~vllLrNHGvl~~G~tv~eAf~~~~~l 261 (414)
.||++|+..... +. +.+++|.+++.+ .-.+.+.|||+ -+++++..+..+
T Consensus 8 ~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~-~GFf~v~nHGi-----l~~~~~~~~~~F 61 (331)
T 1odm_A 8 NVPKIDVSPLFGDDQAAKMRVAQQIDAASRD-TGFFYAVNHGI-----NVQRLSQKTKEF 61 (331)
T ss_dssp CCCEEECGGGGSSCHHHHHHHHHHHHHHHHT-TSEEEEESCCC-----CHHHHHHHHHHH
T ss_pred CCCEEEchHhcCCChHHHHHHHHHHHHHHHh-CCEEEEEccce-----eHHHHHHHHHhc
Confidence 477887765321 22 346677777775 56889999999 566666655444
No 17
>2izy_A CAMP-dependent protein kinase regulatory subunit II; D/D, RII, PKA, acetylation, transferase, CAMP- binding, phosphorylation, nucleotide-binding; 2.2A {Mus musculus} SCOP: a.31.1.1 PDB: 1l6e_A 1r2a_A 2drn_A 2h9r_A
Probab=20.53 E-value=1e+02 Score=21.91 Aligned_cols=37 Identities=11% Similarity=0.041 Sum_probs=28.8
Q ss_pred hhhccChhhHHHHHHHHHHHHHcCCCCchhhHHHhhhhc
Q psy14071 8 EMIMNSRLFREELERIIEIQMKDGSGSATLLQSISDMMG 46 (414)
Q Consensus 8 ~~il~s~~f~~ele~~~~~~~~~g~~~~~~l~~~~~~~~ 46 (414)
++|-..+-+.+.|+.++.+-+++. |+++++..++++.
T Consensus 2 ~~~~ip~~l~~lL~~f~~evlr~q--P~Di~~Faa~YF~ 38 (54)
T 2izy_A 2 GHIQIPPGLTELLQGYTVEVLRQQ--PPDLVDFAVEYFT 38 (54)
T ss_dssp ---CCCTTHHHHHHHHHHHHHHHC--CSCHHHHHHHHHH
T ss_pred CccccCccHHHHHHHHHHHHHHHC--CCCHHHHHHHHHH
Confidence 456678889999999999999976 7788888887763
Done!