BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14072
(205 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2WGP|A Chain A, Crystal Structure Of Human Dual Specificity Phosphatase 14
pdb|2WGP|B Chain B, Crystal Structure Of Human Dual Specificity Phosphatase 14
Length = 190
Score = 116 bits (290), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 54/139 (38%), Positives = 90/139 (64%), Gaps = 3/139 (2%)
Query: 59 VTCIVNXXXXXXXXXXXXTIKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHC 118
+TCIVN + VK+ + D P+ YFD VAD + + + G TL+HC
Sbjct: 52 ITCIVNATIEIPNFNWPQ-FEYVKVPLADMPHAPIGLYFDTVADKIHSVSRKHGATLVHC 110
Query: 119 VAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAESSV 178
AGVSRSA+LC+AYL+K++ + +A++++++ RP IRPN+GF++QLI+YE++ + +S+V
Sbjct: 111 AAGVSRSATLCIAYLMKFHNVCLLEAYNWVKARRPVIRPNVGFWRQLIDYERQLFGKSTV 170
Query: 179 EIVYNAAAQTYIPSVYEED 197
++V +P VYE++
Sbjct: 171 KMVQTPYG--IVPDVYEKE 187
>pdb|2ESB|A Chain A, Crystal Structure Of Human Dusp18
Length = 188
Score = 107 bits (268), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 51/125 (40%), Positives = 83/125 (66%), Gaps = 2/125 (1%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
I+ +++ + DS L +FD +AD + ++ + G TL+HC AGVSRSA+LCLAYL+KY+
Sbjct: 64 IQYMQVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYH 123
Query: 138 QMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAESSVEIVYNAAAQTYIPSVYEED 197
M+ A + +S RP IRPN GF++QLI+YE + + +++V +V + IP +YE++
Sbjct: 124 AMSLLDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVGM--IPDIYEKE 181
Query: 198 YSNML 202
M+
Sbjct: 182 VRLMI 186
>pdb|2G6Z|A Chain A, Crystal Structure Of Human Dusp5
pdb|2G6Z|B Chain B, Crystal Structure Of Human Dusp5
pdb|2G6Z|C Chain C, Crystal Structure Of Human Dusp5
Length = 211
Score = 81.6 bits (200), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%)
Query: 83 IHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFH 142
I + DS T + S+F + D + ++++GG L+H AG+SRS ++C+AYL+K Q
Sbjct: 55 IPVEDSHTADISSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLK 114
Query: 143 QAFHYLRSLRPCIRPNLGFFKQLINYE 169
+AF Y++ R + PN GF QL+ YE
Sbjct: 115 EAFDYIKQRRSMVSPNFGFMGQLLQYE 141
>pdb|2HCM|A Chain A, Crystal Structure Of Mouse Putative Dual Specificity
Phosphatase Complexed With Zinc Tungstate, New York
Structural Genomics Consortium
Length = 164
Score = 73.2 bits (178), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 57/99 (57%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
+ +++ + D E L ++ + ++ +GG L++C G SRSA++C AYL+++
Sbjct: 56 VAELRVPVFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHR 115
Query: 138 QMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAES 176
+ +AF ++S RP PNLGF+ QL YE+ A++
Sbjct: 116 GHSLDRAFQMVKSARPVAEPNLGFWAQLQKYEQTLQAQA 154
>pdb|1M3G|A Chain A, Solution Structure Of The Catalytic Domain Of Mapk
Phosphatase Pac-1: Insights Into Substrate-Induced
Enzymatic Activation
Length = 145
Score = 70.1 bits (170), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 53/89 (59%)
Query: 83 IHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFH 142
I + D+ + ++F + + +K+ GG L+H AG+SRSA++CLAYL++ ++
Sbjct: 53 IPVEDNQMVEISAWFQEAIGFIDWVKNSGGRVLVHSQAGISRSATICLAYLMQSRRVRLD 112
Query: 143 QAFHYLRSLRPCIRPNLGFFKQLINYEKR 171
+AF +++ R I PN F QL+ +E +
Sbjct: 113 EAFDFVKQRRGVISPNFSFMGQLLQFETQ 141
>pdb|1WRM|A Chain A, Crystal Structure Of Jsp-1
Length = 165
Score = 69.7 bits (169), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 53/93 (56%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
+K + I DS ++ L +F + + + + G L+HC+AGVSRS +L +AY++
Sbjct: 50 VKYLCIPAADSPSQNLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVT 109
Query: 138 QMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEK 170
+ A H +R+ R C PN+GF +QL +EK
Sbjct: 110 DFGWEDALHTVRAGRSCANPNVGFQRQLQEFEK 142
>pdb|2R0B|A Chain A, Crystal Structure Of Human Tyrosine Phosphatase-like
Serine/threonine/tyrosine-interacting Protein
Length = 154
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 10/150 (6%)
Query: 36 EVTEVCPGLLLCGATMVGRTNHPV---------TCIV-NXXXXXXXXXXXXTIKTVKIHI 85
E+ E+ PGL L + ++ PV CI N + + + I
Sbjct: 5 EMQEILPGLFLGPYSSAMKSKLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDI 64
Query: 86 LDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAF 145
D+ E + +F + + GG L+H AG+SRSA+ +AY+++ M + AF
Sbjct: 65 ADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAF 124
Query: 146 HYLRSLRPCIRPNLGFFKQLINYEKRFYAE 175
Y++ R CI PN GF QL YE + A+
Sbjct: 125 AYVQERRFCINPNAGFVHQLQEYEAIYLAK 154
>pdb|3EZZ|A Chain A, Crystal Structure Of Human Mkp-2
pdb|3EZZ|B Chain B, Crystal Structure Of Human Mkp-2
pdb|3EZZ|C Chain C, Crystal Structure Of Human Mkp-2
pdb|3EZZ|D Chain D, Crystal Structure Of Human Mkp-2
pdb|3EZZ|E Chain E, Crystal Structure Of Human Mkp-2
pdb|3EZZ|F Chain F, Crystal Structure Of Human Mkp-2
Length = 144
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 53/92 (57%)
Query: 83 IHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFH 142
I + D+ + S+F + + + +KD G L+H AG+SRSA++CLAYL+ ++
Sbjct: 53 IPVEDNHKADISSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLE 112
Query: 143 QAFHYLRSLRPCIRPNLGFFKQLINYEKRFYA 174
+AF +++ R I PN F QL+ +E + A
Sbjct: 113 EAFEFVKQRRSIISPNFSFMGQLLQFESQVLA 144
>pdb|3S4E|A Chain A, Crystal Structrue Of A Novel Mitogen-Activated Protein
Kinase Phosphatase, Skrp1
Length = 144
Score = 68.2 bits (165), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 53/88 (60%)
Query: 83 IHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFH 142
I ILD + SYF + + +++ K + G L+H AGVSR+A++ + +L+ Q +F
Sbjct: 53 ISILDLPETNILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFT 112
Query: 143 QAFHYLRSLRPCIRPNLGFFKQLINYEK 170
AF +++ RP I PN GF +QL Y++
Sbjct: 113 SAFSLVKNARPSICPNSGFMEQLRTYQE 140
>pdb|2OUD|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Mkp5
Length = 177
Score = 66.2 bits (160), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 111 GGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEK 170
G LIHC AGVSRSA++ +AYL+K+ +M A+ +++ RP I PNL F QL+ +E+
Sbjct: 87 GKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEE 146
>pdb|1ZZW|A Chain A, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
pdb|1ZZW|B Chain B, Crystal Structure Of Catalytic Domain Of Human Map Kinase
Phosphatase 5
Length = 149
Score = 65.5 bits (158), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 41/60 (68%)
Query: 111 GGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEK 170
G LIHC AGVSRSA++ +AYL+K+ +M A+ +++ RP I PNL F QL+ +E+
Sbjct: 83 GKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKGKRPIISPNLNFMGQLLEFEE 142
>pdb|2E0T|A Chain A, Crystal Structure Of Catalytic Domain Of Dual Specificity
Phosphatase 26, Ms0830 From Homo Sapiens
Length = 151
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 53/96 (55%), Gaps = 2/96 (2%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQK-IKDEGGCTLIHCVAGVSRSASLCLAYLIKY 136
I+ + + DS + +F AD + + + GG L+HC GVSRSA+L LAYL+ Y
Sbjct: 51 IRYLGVEAHDSPAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLY 110
Query: 137 NQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRF 172
+ + +A ++ R I PN GF +QL+ ++R
Sbjct: 111 HHLTLVEAIKKVKDHRGII-PNRGFLRQLLALDRRL 145
>pdb|4HRF|A Chain A, Atomic Structure Of Dusp26
pdb|4HRF|B Chain B, Atomic Structure Of Dusp26
pdb|4HRF|C Chain C, Atomic Structure Of Dusp26
pdb|4HRF|D Chain D, Atomic Structure Of Dusp26
Length = 160
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 10/143 (6%)
Query: 39 EVCPGLLLCGATMVGRTNH----PVTCIVNXXXXXXXXX----XXXTIKTVKIHILDSAT 90
EV PGL L M +T ++N I+ + + DS
Sbjct: 5 EVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDSPA 64
Query: 91 EPLDSYFDQVADLVQK-IKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLR 149
+ +F AD + + + GG L+H GVSRSA+L LAYL+ Y+ + +A ++
Sbjct: 65 FDMSIHFQTAADFIHRALSQPGGKILVHSAVGVSRSATLVLAYLMLYHHLTLVEAIKKVK 124
Query: 150 SLRPCIRPNLGFFKQLINYEKRF 172
R I PN GF +QL+ ++R
Sbjct: 125 DHRGII-PNRGFLRQLLALDRRL 146
>pdb|2NT2|A Chain A, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|B Chain B, Crystal Structure Of Slingshot Phosphatase 2
pdb|2NT2|C Chain C, Crystal Structure Of Slingshot Phosphatase 2
Length = 145
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 44/87 (50%)
Query: 83 IHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFH 142
I + D L +Y++ + K K G L+H GVSRSAS +AY +K N
Sbjct: 53 IRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLD 112
Query: 143 QAFHYLRSLRPCIRPNLGFFKQLINYE 169
+A+ Y++ R +PN F +QL Y+
Sbjct: 113 RAYDYVKERRTVTKPNPSFMRQLEEYQ 139
>pdb|3LJ8|A Chain A, Crystal Structure Of Mkp-4
Length = 146
Score = 58.2 bits (139), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 53/94 (56%)
Query: 82 KIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNF 141
+I I D ++ L +F + + + + + L+HC+AGVSRS ++ +AYL++ ++
Sbjct: 53 QIPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHCLAGVSRSVTVTVAYLMQKLHLSL 112
Query: 142 HQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAE 175
+ A+ ++ + I PN F QL+++E+ E
Sbjct: 113 NDAYDLVKRKKSNISPNFNFMGQLLDFERSLRLE 146
>pdb|2P4D|A Chain A, Structure-Assisted Discovery Of Variola Major H1
Phosphatase Inhibitors
Length = 172
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 5/94 (5%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
I + I ++D T + YFD V + K L+HCVAGV+RS + LAYL N
Sbjct: 71 INIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCVAGVNRSGAXILAYLXSKN 130
Query: 138 Q-----MNFHQAFHYLRSLRPCIRPNLGFFKQLI 166
+ + F +H R LR N F +Q+I
Sbjct: 131 KESSPXLYFLYVYHSXRDLRGAFVENPSFKRQII 164
>pdb|1VHR|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase
pdb|1VHR|B Chain B, Human Vh1-Related Dual-Specificity Phosphatase
Length = 184
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLV-QKIKDEGGCTLIHCVAGVSRSASLCLAYLIKY 136
I + I D+ L +YF++ AD + Q + + G L+HC G SRS +L +AYL+
Sbjct: 82 ITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMR 141
Query: 137 NQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAESSVE 179
+M+ A +R R I PN GF QL R E ++
Sbjct: 142 QKMDVKSALSIVRQNRE-IGPNDGFLAQLCQLNDRLAKEGKLK 183
>pdb|3F81|A Chain A, Interaction Of Vhr With Sa3
pdb|3F81|B Chain B, Interaction Of Vhr With Sa3
Length = 183
Score = 57.4 bits (137), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 51/103 (49%), Gaps = 2/103 (1%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLV-QKIKDEGGCTLIHCVAGVSRSASLCLAYLIKY 136
I + I D+ L +YF++ AD + Q + + G L+HC G SRS +L +AYL+
Sbjct: 81 ITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGRVLVHCREGYSRSPTLVIAYLMMR 140
Query: 137 NQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAESSVE 179
+M+ A +R R I PN GF QL R E ++
Sbjct: 141 QKMDVKSALSIVRQNRE-IGPNDGFLAQLCQLNDRLAKEGKLK 182
>pdb|2RF6|A Chain A, Crystal Structure Of The Vaccinia Virus Dual-Specificity
Phosphatase Vh1
pdb|3CM3|A Chain A, High Resolution Crystal Structure Of The Vaccinia Virus
Dual-Specificity Phosphatase Vh1
Length = 176
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 5/94 (5%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
I + I ++D T + YFD V + K L+H AGV+RS ++ LAYL+ N
Sbjct: 75 INIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKN 134
Query: 138 Q-----MNFHQAFHYLRSLRPCIRPNLGFFKQLI 166
+ + F +H +R LR N F +Q+I
Sbjct: 135 KESLPMLYFLYVYHSMRDLRGAFVENPSFKRQII 168
>pdb|2Q05|A Chain A, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|B Chain B, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|C Chain C, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
pdb|2Q05|D Chain D, Crystal Structure Of TyrSER PROTEIN PHOSPHATASE FROM
VACCINIA VIRUS Wr
Length = 195
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 5/94 (5%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
I + I ++D T + YFD V + K L+HC AGV+RS + LAYL N
Sbjct: 92 INIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAXILAYLXSKN 151
Query: 138 Q-----MNFHQAFHYLRSLRPCIRPNLGFFKQLI 166
+ + F +H R LR N F +Q+I
Sbjct: 152 KESLPXLYFLYVYHSXRDLRGAFVENPSFKRQII 185
>pdb|1YZ4|A Chain A, Crystal Structure Of Dusp15
pdb|1YZ4|B Chain B, Crystal Structure Of Dusp15
Length = 160
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 46/88 (52%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
I ++I + D+ P+ +F + + + + GG L+H AG+SRS ++ AY++
Sbjct: 51 ITYLRIPVADTPEVPIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVT 110
Query: 138 QMNFHQAFHYLRSLRPCIRPNLGFFKQL 165
+ + +++ RP PN GF +QL
Sbjct: 111 GLGWRDVLEAIKATRPIANPNPGFRQQL 138
>pdb|1MKP|A Chain A, Crystal Structure Of Pyst1 (Mkp3)
Length = 144
Score = 54.3 bits (129), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 52/92 (56%)
Query: 79 KTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQ 138
K +I I D ++ L +F + + + + + L+H +AG+SRS ++ +AYL++
Sbjct: 51 KYKQIPISDHWSQNLSQFFPEAISFIDEARGKNCGVLVHSLAGISRSVTVTVAYLMQKLN 110
Query: 139 MNFHQAFHYLRSLRPCIRPNLGFFKQLINYEK 170
++ + A+ ++ + I PN F QL+++E+
Sbjct: 111 LSMNDAYDIVKMKKSNISPNFNFMGQLLDFER 142
>pdb|2HXP|A Chain A, Crystal Structure Of The Human Phosphatase (Dusp9)
Length = 155
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 51/89 (57%)
Query: 82 KIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNF 141
+I I D ++ L +F + + + + + L+H +AGVSRS ++ +AYL++ ++
Sbjct: 56 QIPISDHWSQNLSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSL 115
Query: 142 HQAFHYLRSLRPCIRPNLGFFKQLINYEK 170
+ A+ ++ + I PN F QL+++E+
Sbjct: 116 NDAYDLVKRKKSNISPNFNFMGQLLDFER 144
>pdb|1J4X|A Chain A, Human Vh1-Related Dual-Specificity Phosphatase C124s
Mutant- Peptide Complex
Length = 184
Score = 53.9 bits (128), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 93 LDSYFDQVADLV-QKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSL 151
L +YF++ AD + Q + + G L+H G SRS +L +AYL+ +M+ A +R
Sbjct: 97 LSAYFERAADFIDQALAQKNGRVLVHSREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQN 156
Query: 152 RPCIRPNLGFFKQLINYEKRFYAESSVE 179
R I PN GF QL R E ++
Sbjct: 157 RE-IGPNDGFLAQLCQLNDRLAKEGKLK 183
>pdb|2Y96|A Chain A, Structure Of Human Dual-Specificity Phosphatase 27
pdb|2Y96|B Chain B, Structure Of Human Dual-Specificity Phosphatase 27
Length = 219
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 87 DSATEPLDSYFDQVADLVQK-IKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAF 145
D T L +F A + + + D+ L+HCV G SRSA+L LAYL+ + M A
Sbjct: 114 DLPTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGRSRSATLVLAYLMIHKDMTLVDAI 173
Query: 146 HYLRSLRPCIRPNLGFFKQLINYEKRF 172
+ R C+ PN GF KQL +K+
Sbjct: 174 QQVAKNR-CVLPNRGFLKQLRELDKQL 199
>pdb|2J16|B Chain B, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 40/62 (64%)
Query: 115 LIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYA 174
LIHC G+SRSA+L +AY++KY+ ++ ++ L+S I P++G QL+ +E A
Sbjct: 121 LIHCQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWEVALNA 180
Query: 175 ES 176
++
Sbjct: 181 KT 182
>pdb|2PQ5|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|B Chain B, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|C Chain C, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
pdb|2PQ5|D Chain D, Crystal Structure Of Dual Specificity Protein Phosphatase
13 (Dusp13)
Length = 205
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 93 LDSYFDQVADLVQK-IKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSL 151
L YF VA ++ + G L+HC GVSRSA+L LA+L+ Y M +A +++
Sbjct: 112 LSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYENMTLVEAIQTVQAH 171
Query: 152 RPCIRPNLGFFKQLINYEKRFYAESS 177
R I PN GF +QL + R E+
Sbjct: 172 R-NICPNSGFLRQLQVLDNRLGRETG 196
>pdb|2J17|A Chain A, Ptyr Bound Form Of Sdp-1
pdb|2J17|B Chain B, Ptyr Bound Form Of Sdp-1
Length = 182
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 115 LIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYA 174
LIH G+SRSA+L +AY++KY+ ++ ++ L+S I P++G QL+ +E A
Sbjct: 121 LIHSQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWEVALNA 180
Query: 175 ES 176
++
Sbjct: 181 KT 182
>pdb|2J16|A Chain A, Apo & Sulphate Bound Forms Of Sdp-1
Length = 182
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%)
Query: 115 LIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYA 174
LIH G+SRSA+L +AY++KY+ ++ ++ L+S I P++G QL+ +E A
Sbjct: 121 LIHXQCGLSRSATLIIAYIMKYHNLSLRHSYDLLKSRADKINPSIGLIFQLMEWEVALNA 180
Query: 175 ES 176
++
Sbjct: 181 KT 182
>pdb|2GWO|A Chain A, Crystal Structure Of Tmdp
pdb|2GWO|B Chain B, Crystal Structure Of Tmdp
pdb|2GWO|C Chain C, Crystal Structure Of Tmdp
pdb|2GWO|D Chain D, Crystal Structure Of Tmdp
Length = 198
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 2/86 (2%)
Query: 93 LDSYFDQVADLVQK-IKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSL 151
L YF VA ++ + G L+HC GVSRSA+L LA+L+ M +A +++
Sbjct: 112 LSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMICENMTLVEAIQTVQAH 171
Query: 152 RPCIRPNLGFFKQLINYEKRFYAESS 177
R I PN GF +QL + R E+
Sbjct: 172 R-NICPNSGFLRQLQVLDNRLGRETG 196
>pdb|3EMU|A Chain A, Crystal Structure Of A Leucine Rich Repeat And Phosphatase
Domain Containing Protein From Entamoeba Histolytica
Length = 161
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 86 LDSATEPLDSYFDQVAD----LVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNF 141
LD +E +D + + +++ I+ + G +I GV+++ ++ +A+L+ Y +++F
Sbjct: 59 LDIVSEEGHQLYDSIPNAIKFIIRSIQRKEGVLIISG-TGVNKAPAIVIAFLMYYQRLSF 117
Query: 142 HQAFHYLRSLRPCIRPNLGFFKQLINYEKRF 172
AF+ ++ L P I GF QL +EK+
Sbjct: 118 INAFNKVQGLYPLIDIESGFILQLKLFEKKL 148
>pdb|1X24|A Chain A, Prl-1 (Ptp4a)
pdb|1X24|B Chain B, Prl-1 (Ptp4a)
Length = 180
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 83 IHILD----SATEPLDSYFDQVADLVQ-KIKDEGGCTL-IHCVAGVSRSASLCLAYLIKY 136
IH+LD P + D LV+ K ++E GC + +HCVAG+ R+ L LI+
Sbjct: 83 IHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIE- 141
Query: 137 NQMNFHQAFHYLRSLRPCIRPNLGFF--KQLINYEK 170
M + A ++R R G F KQL+ EK
Sbjct: 142 GGMKYEDAVQFIRQKR------RGAFNSKQLLYLEK 171
>pdb|3RZ2|A Chain A, Crystal Of Prl-1 Complexed With Peptide
pdb|3RZ2|B Chain B, Crystal Of Prl-1 Complexed With Peptide
Length = 189
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 83 IHILD----SATEPLDSYFDQVADLVQ-KIKDEGGCTL-IHCVAGVSRSASLCLAYLIKY 136
IH+LD P + D LV+ K ++E GC + +HCVAG+ R+ L LI+
Sbjct: 83 IHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIE- 141
Query: 137 NQMNFHQAFHYLRSLRPCIRPNLGFF--KQLINYEK 170
M + A ++R R G F KQL+ EK
Sbjct: 142 GGMKYEDAVQFIRQKR------RGAFNSKQLLYLEK 171
>pdb|3RGO|A Chain A, Crystal Structure Of Ptpmt1
Length = 157
Score = 40.0 bits (92), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 41/83 (49%), Gaps = 2/83 (2%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
++ +++ +D P + + K + G C +HC AG SRSA++ AYLI+ +
Sbjct: 56 VEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVH 115
Query: 138 QMNFHQAFHYLRSLRP--CIRPN 158
+ +A + +R IRP+
Sbjct: 116 NWSPEEAIEAIAKIRSHISIRPS 138
>pdb|1ZCK|A Chain A, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|B Chain B, Native Structure Prl-1 (Ptp4a1)
pdb|1ZCK|C Chain C, Native Structure Prl-1 (Ptp4a1)
Length = 154
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 83 IHILD----SATEPLDSYFDQVADLVQ-KIKDEGGCTL-IHCVAGVSRSASLCLAYLIKY 136
IH+LD P + D LV+ K ++E GC + +HCVAG+ R+ L LI+
Sbjct: 57 IHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIE- 115
Query: 137 NQMNFHQAFHYLRSLRPCIRPNLGFF--KQLINYEK 170
+ A ++R R G F KQL+ EK
Sbjct: 116 GGXKYEDAVQFIRQKR------RGAFNSKQLLYLEK 145
>pdb|1RXD|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
pdb|1RXD|C Chain C, Crystal Structure Of Human Protein Tyrosine Phosphatase
4a1
Length = 159
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 83 IHILD----SATEPLDSYFDQVADLVQ-KIKDEGGCTL-IHCVAGVSRSASLCLAYLIKY 136
IH+LD P + D LV+ K ++E GC + +HCVAG+ R+ L LI+
Sbjct: 62 IHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHCVAGLGRAPVLVALALIE- 120
Query: 137 NQMNFHQAFHYLRSLRPCIRPNLGFF--KQLINYEK 170
+ A ++R R G F KQL+ EK
Sbjct: 121 GGXKYEDAVQFIRQKR------RGAFNSKQLLYLEK 150
>pdb|2I6I|A Chain A, Crystal Structures Of The Archaeal Sulfolobus Ptp-Fold
Phosphatase
pdb|2I6J|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphate Ion
pdb|2I6M|A Chain A, Crystal Structure Of The Complexes Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Tungstate
pdb|3RO1|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Terpyridine
Platinum(Ii)
Length = 161
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 36/76 (47%), Gaps = 4/76 (5%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
++ + I I D P DS F + + K+ L+HCV G+ R+ ++ +YLI
Sbjct: 60 LQPLHIPIPDGGV-PSDSQFLTIMKWLLSEKE---GNLVHCVGGIGRTGTILASYLILTE 115
Query: 138 QMNFHQAFHYLRSLRP 153
+ A +R +RP
Sbjct: 116 GLEVESAIDEVRLVRP 131
>pdb|1ZCL|A Chain A, Prl-1 C104s Mutant In Complex With Sulfate
pdb|1ZCL|B Chain B, Prl-1 C104s Mutant In Complex With Sulfate
Length = 180
Score = 37.4 bits (85), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 45/96 (46%), Gaps = 15/96 (15%)
Query: 83 IHILD----SATEPLDSYFDQVADLVQ-KIKDEGGCTL-IHCVAGVSRSASLCLAYLIKY 136
IH+LD P + D LV+ K ++E GC + +H VAG+ R+ L LI+
Sbjct: 83 IHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHSVAGLGRAPVLVALALIE- 141
Query: 137 NQMNFHQAFHYLRSLRPCIRPNLGFF--KQLINYEK 170
M + A ++R R G F KQL+ EK
Sbjct: 142 GGMKYEDAVQFIRQKR------RGAFNSKQLLYLEK 171
>pdb|1OHC|A Chain A, Structure Of The Proline Directed Phosphatase Cdc14
pdb|1OHD|A Chain A, Structure Of Cdc14 In Complex With Tungstate
Length = 348
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 6/100 (6%)
Query: 56 NHPVTCIV--NXXXXXXXXXXXXTIKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGC 113
NH VT I+ N + D +T P D+ + D+ + + G
Sbjct: 216 NHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGST-PTDAIVKEFLDICENAE---GA 271
Query: 114 TLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRP 153
+HC AG+ R+ +L Y++K+ +M + ++R RP
Sbjct: 272 IAVHCKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRP 311
>pdb|3RGQ|A Chain A, Crystal Structure Of Ptpmt1 In Complex With Pi(5)p
Length = 156
Score = 36.6 bits (83), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 2/83 (2%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
++ +++ +D P + + K + G C +H AG SRSA++ AYLI+ +
Sbjct: 57 VEQLRLSTVDMTGVPTLANLHKGVQFALKYQALGQCVYVHSKAGRSRSATMVAAYLIQVH 116
Query: 138 QMNFHQAFHYLRSLRP--CIRPN 158
+ +A + +R IRP+
Sbjct: 117 NWSPEEAIEAIAKIRSHISIRPS 139
>pdb|4ERC|A Chain A, Structure Of Vhz Bound To Metavanadate
pdb|4ERC|B Chain B, Structure Of Vhz Bound To Metavanadate
Length = 150
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 26/62 (41%)
Query: 92 PLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSL 151
P D+ +V + G +HC G R+ ++ YL+K + A +R L
Sbjct: 69 PAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRRL 128
Query: 152 RP 153
RP
Sbjct: 129 RP 130
>pdb|3NME|A Chain A, Structure Of A Plant Phosphatase
pdb|3NME|B Chain B, Structure Of A Plant Phosphatase
Length = 294
Score = 36.2 bits (82), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 100 VADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPC 154
V L + +K GG T +H AG R+ ++ L Y +A L S R C
Sbjct: 95 VGTLYKAVKRNGGVTYVHSTAGXGRAPAVALTYXFWVQGYKLXEAHKLLXSKRSC 149
>pdb|2DXP|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-Fold Phosphatase With Phosphopeptides
A-(P)y-R
pdb|2I6O|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Phosphopeptides
N-g-(p)y-k-n
pdb|2I6P|A Chain A, Crystal Structure Of The Complex Of The Archaeal
Sulfolobus Ptp-fold Phosphatase With Pnpp
Length = 161
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/77 (25%), Positives = 35/77 (45%), Gaps = 4/77 (5%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
++ + I I D P DS F + + K+ L+H V G+ R+ ++ +YLI
Sbjct: 60 LQPLHIPIPDGGV-PSDSQFLTIMKWLLSEKE---GNLVHSVGGIGRTGTILASYLILTE 115
Query: 138 QMNFHQAFHYLRSLRPC 154
+ A +R +RP
Sbjct: 116 GLEVESAIDEVRLVRPG 132
>pdb|2IMG|A Chain A, Crystal Structure Of Dual Specificity Protein Phosphatase
23 From Homo Sapiens In Complex With Ligand Malate Ion
Length = 151
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 25/62 (40%)
Query: 92 PLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSL 151
P D+ +V + G +HC G R+ + YL+K + A +R L
Sbjct: 70 PAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTXLACYLVKERGLAAGDAIAEIRRL 129
Query: 152 RP 153
RP
Sbjct: 130 RP 131
>pdb|1R6H|A Chain A, Solution Structure Of Human Prl-3
Length = 172
Score = 34.7 bits (78), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 111 GGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLR 152
G C +HCVAG+ R+ L LI+ + M + A ++R R
Sbjct: 100 GSCVAVHCVAGLGRAPVLVALALIE-SGMKYEDAIQFIRQKR 140
>pdb|1V3A|A Chain A, Structure Of Human Prl-3, The Phosphatase Associated With
Cancer Metastasis
Length = 173
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 15/42 (35%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 111 GGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLR 152
G C +HCVAG+ R+ L LI+ + M + A ++R R
Sbjct: 97 GSCVAVHCVAGLGRAPVLVALALIE-SGMKYEDAIQFIRQKR 137
>pdb|1XM2|A Chain A, Crystal Structure Of Human Prl-1
pdb|1XM2|B Chain B, Crystal Structure Of Human Prl-1
pdb|1XM2|C Chain C, Crystal Structure Of Human Prl-1
pdb|1XM2|D Chain D, Crystal Structure Of Human Prl-1
pdb|1XM2|E Chain E, Crystal Structure Of Human Prl-1
pdb|1XM2|F Chain F, Crystal Structure Of Human Prl-1
Length = 173
Score = 34.7 bits (78), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 44/96 (45%), Gaps = 15/96 (15%)
Query: 83 IHILD----SATEPLDSYFDQVADLVQ-KIKDEGGCTL-IHCVAGVSRSASLCLAYLIKY 136
IH+LD P + D LV+ K ++E GC + +H VAG+ R+ L LI+
Sbjct: 63 IHVLDWPFDDGAPPSNQIVDDWLSLVKIKFREEPGCCIAVHSVAGLGRAPVLVALALIE- 121
Query: 137 NQMNFHQAFHYLRSLRPCIRPNLGFF--KQLINYEK 170
+ A ++R R G F KQL+ EK
Sbjct: 122 GGXKYEDAVQFIRQKR------RGAFNSKQLLYLEK 151
>pdb|1OHE|A Chain A, Structure Of Cdc14b Phosphatase With A Peptide Ligand
Length = 348
Score = 33.5 bits (75), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 42/100 (42%), Gaps = 6/100 (6%)
Query: 56 NHPVTCIV--NXXXXXXXXXXXXTIKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGC 113
NH VT I+ N + D +T P D+ + D+ + + G
Sbjct: 216 NHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGST-PTDAIVKEFLDICENAE---GA 271
Query: 114 TLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRP 153
+H AG+ R+ +L Y++K+ +M + ++R RP
Sbjct: 272 IAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRP 311
>pdb|3A5K|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 304
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 213 EHGPVVVHCSAGIGRSGTFCLA 234
>pdb|1NWL|A Chain A, Crystal Structure Of The Ptp1b Complexed With
Sp7343-Sp7964, A Ptyr Mimetic
pdb|1NWE|A Chain A, Ptp1b R47c Modified At C47 With N-[4-(2-{2-[3-(2-Bromo-
Acetylamino)-Propionylamino]-3-Hydroxy-Propionylamino}-
Ethyl)-Phenyl]-Oxalamic Acid
Length = 298
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1L8G|A Chain A, Crystal Structure Of Ptp1b Complexed With 7-(1,1-dioxo-1h-
Benzo[d]isothiazol-3-yloxymethyl)-2-(oxalyl-amino)-4,7-
Dihydro-5h-thieno[2,3-c]pyran-3-carboxylic Acid
Length = 321
Score = 32.3 bits (72), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1L8K|A Chain A, T Cell Protein-Tyrosine Phosphatase Structure
Length = 314
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 106 KIKDEG------GCTLIHCVAGVSRSASL-----CLAYLIKYNQMNFHQAFHYLRSLR 152
K+++ G G +IHC AG+ RS + CL + K + +N Q +R R
Sbjct: 198 KVRESGSLNPDHGPAVIHCSAGIGRSGTFSLVDTCLVLMEKGDDINIKQVLLNMRKYR 255
>pdb|3QKP|A Chain A, Protein Tyrosine Phosphatase 1b - Apo W179f Mutant With
Open Wpd-Loop
pdb|3QKQ|A Chain A, Protein Tyrosine Phosphatase 1b - W179f Mutant Bound With
Vanadate
Length = 321
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1BZC|A Chain A, Human Ptp1b Catalytic Domain Complexed With Tpi
Length = 321
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|2CMA|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|3A5J|A Chain A, Crystal Structure Of Protein-Tyrosine Phosphatase 1b
Length = 327
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 213 EHGPVVVHCSAGIGRSGTFCLA 234
>pdb|1NL9|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 12 Using A Linked-Fragment Strategy
pdb|1NNY|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 23 Using A Linked-fragment Strategy
pdb|1NO6|A Chain A, Potent, Selective Protein Tyrosine Phosphatase 1b
Inhibitor Compound 5 Using A Linked-fragment Strategy
pdb|1NZ7|A Chain A, Potent, Selective Inhibitors Of Protein Tyrosine
Phosphatase 1b Using A Second Phosphotyrosine Binding
Site, Complexed With Compound 19.
pdb|1ONY|A Chain A, Oxalyl-aryl-amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 17
pdb|1ONZ|A Chain A, Oxalyl-Aryl-Amino Benzoic Acid Inhibitors Of Ptp1b,
Compound 8b
pdb|1OEM|X Chain X, Ptp1b With The Catalytic Cysteine Oxidized To A
Sulfenyl-Amide Bond
pdb|1OES|A Chain A, Oxidation State Of Protein Tyrosine Phosphatase 1b
pdb|1PXH|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b With
Potent And Selective Bidentate Inhibitor Compound 2
pdb|1PH0|A Chain A, Non-Carboxylic Acid-Containing Inhibitor Of Ptp1b
Targeting The Second Phosphotyrosine Site
pdb|1PYN|A Chain A, Dual-Site Potent, Selective Protein Tyrosine Phosphatase
1b Inhibitor Using A Linked Fragment Strategy And A
Malonate Head On The First Site
pdb|1Q1M|A Chain A, A Highly Efficient Approach To A Selective And Cell Active
Ptp1b Inhibitors
pdb|1QXK|A Chain A, Monoacid-Based, Cell Permeable, Selective Inhibitors Of
Protein Tyrosine Phosphatase 1b
pdb|1SUG|A Chain A, 1.95 A Structure Of Apo Protein Tyrosine Phosphatase 1b
pdb|1XBO|A Chain A, Ptp1b Complexed With Isoxazole Carboxylic Acid
pdb|1WAX|A Chain A, Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
pdb|2BGD|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2BGE|A Chain A, Structure-Based Design Of Protein Tyrosine Phosphatase-1b
Inhibitors
pdb|2CM7|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CM8|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNF|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNG|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNH|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2CNI|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
pdb|2HNP|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2HNQ|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase 1b
pdb|2VEU|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEV|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEW|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEX|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|2VEY|A Chain A, Crystal Strucutre Of Protein Tyrosine Phosphatase 1b In
Complex With An Isothiazolidinone-Containing Inhibitor
pdb|3D9C|A Chain A, Crystal Structure Ptp1b Complex With Aryl Seleninic Acid
pdb|3EAX|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Compound Lzp-6
pdb|3EB1|A Chain A, Crystal Structure Ptp1b Complex With Small Molecule
Inhibitor Lzp-25
pdb|3I7Z|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo First Catalytic Step
pdb|3I80|A Chain A, Protein Tyrosine Phosphatase 1b - Transition State Analog
Fo Second Catalytic Step
Length = 321
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|2FJM|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJM|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 219 EHGPVVVHCSAGIGRSGTFCLA 240
>pdb|1Q6J|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|1Q6M|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 3
pdb|1Q6N|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6N|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 4
pdb|1Q6P|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6P|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 6
pdb|1Q6S|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6S|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 9
pdb|1Q6T|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|1Q6T|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 11
pdb|2FJN|A Chain A, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
pdb|2FJN|B Chain B, The Structure Of Phosphotyrosine Phosphatase 1b In Complex
With Compound 2
Length = 310
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 219 EHGPVVVHCSAGIGRSGTFCLA 240
>pdb|1C86|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
(R47v, D48n) Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-
Thieno[2,3-C]pyran-3-Carboxylic Acid
Length = 298
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1BZH|A Chain A, Cyclic Peptide Inhibitor Of Human Ptp1b
Length = 298
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1G7G|A Chain A, Human Ptp1b Catalytic Domain Complexes With Pnu179326
pdb|1JF7|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1JF7|B Chain B, Human Ptp1b Catalytic Domain Complexed With Pnu177836
pdb|1KAK|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1KAV|A Chain A, Human Tyrosine Phosphatase 1b Complexed With An Inhibitor
pdb|1T48|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T49|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|1T4J|A Chain A, Allosteric Inhibition Of Protein Tyrosine Phosphatase 1b
pdb|2F6T|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6V|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6W|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Y|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F6Z|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F70|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
pdb|2F71|A Chain A, Protein Tyrosine Phosphatase 1b With Sulfamic Acid
Inhibitors
Length = 298
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|2CM2|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (P212121)
pdb|2CM3|A Chain A, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CM3|B Chain B, Structure Of Protein Tyrosine Phosphatase 1b (C2)
pdb|2CMB|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CMC|A Chain A, Structural Basis For Inhibition Of Protein Tyrosine
Phosphatase 1b By Isothiazolidinone Heterocyclic
Phosphonate Mimetics
pdb|2CNE|A Chain A, Structural Insights Into The Design Of Nonpeptidic
Isothiazolidinone-Containing Inhibitors Of Protein
Tyrosine Phosphatase 1b
Length = 304
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 213 EHGPVVVHCSAGIGRSGTFCLA 234
>pdb|1ECV|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 5-Iodo-2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C83|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 6-(Oxalyl-Amino)-1h-Indole-5-Carboxylic
Acid
pdb|1C84|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 3-(Oxalyl-Amino)-Naphthalene-2-Carboxlic
Acid
pdb|1C85|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-Benzoic Acid
pdb|1C87|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With
2-(Oxalyl-Amino-4,7-Dihydro-5h-Thieno[2,3-
C]pyran-3-Carboxylic Acid
pdb|1C88|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b
Complexed With 2-(Oxalyl-Amino)-4,5,6,7-Tetrahydro-
Thieno[2,3-C]pyridine-3-Carboxylic Acid
Length = 298
Score = 32.0 bits (71), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1G7F|A Chain A, Human Ptp1b Catalytic Domain Complexed With Pnu177496
Length = 298
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|2NT7|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2NTA|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
Length = 299
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|2AZR|A Chain A, Crystal Structure Of Ptp1b With Bicyclic Thiophene
Inhibitor
pdb|2B07|A Chain A, Crystal Structure Of Ptp1b With Tricyclic Thiophene
Inhibitor.
pdb|2H4G|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2H4K|A Chain A, Crystal Structure Of Ptp1b With A Monocyclic Thiophene
Inhibitor
pdb|2HB1|A Chain A, Crystal Structure Of Ptp1b With Monocyclic Thiophene
Inhibitor
pdb|2QBP|A Chain A, Crystal Structure Of Ptp1b-inhibitor Complex
pdb|2QBQ|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBR|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2QBS|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZMM|A Chain A, Crystal Structure Of Ptp1b-Inhibitor Complex
pdb|2ZN7|A Chain A, Crystal Structures Of Ptp1b-Inhibitor Complexes
Length = 299
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1BZJ|A Chain A, Human Ptp1b Complexed With Tpicooh
Length = 297
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 206 EHGPVVVHCSAGIGRSGTFCLA 227
>pdb|3SME|A Chain A, Structure Of Ptp1b Inactivated By H2o2BICARBONATE
Length = 300
Score = 32.0 bits (71), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 209 EHGPVVVHCSAGIGRSGTFCLA 230
>pdb|1GFY|A Chain A, Residue 259 Is A Key Determinant Of Substrate Specificity
Of Protein-Tyrosine Phosphatase 1b And Alpha
Length = 298
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 207 EHGPVVVHCSAGIGRSGTFCLA 228
>pdb|1LQF|A Chain A, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|B Chain B, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|C Chain C, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
pdb|1LQF|D Chain D, Structure Of Ptp1b In Complex With A Peptidic
Bisphosphonate Inhibitor
Length = 295
Score = 32.0 bits (71), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 219 EHGPVVVHCSAGIGRSGTFCLA 240
>pdb|2F6F|A Chain A, The Structure Of The S295f Mutant Of Human Ptp1b
Length = 302
Score = 32.0 bits (71), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 211 EHGPVVVHCSAGIGRSGTFCLA 232
>pdb|4I8N|A Chain A, Crystal Structure Of Protein Tyrosine Phosphatase 1b In
Complex With An Inhibitor
[(4-{(2s)-2-(1,3-Benzoxazol-2-Yl)-2-[(4-Fluorophenyl)
Sulfamoyl]ethyl}phenyl)amino](Oxo)acetic Acid
Length = 354
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 241 EHGPVVVHCSAGIGRSGTFCLA 262
>pdb|3CWE|A Chain A, Ptp1b In Complex With A Phosphonic Acid Inhibitor
Length = 290
Score = 32.0 bits (71), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++HC AG+ RS + CLA
Sbjct: 214 EHGPVVVHCSAGIGRSGTFCLA 235
>pdb|2PA5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|2PA5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9
pdb|4GE2|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE2|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 3
pdb|4GE5|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE5|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 5
pdb|4GE6|A Chain A, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
pdb|4GE6|B Chain B, Crystal Structure Of Human Protein Tyrosine Phosphatase
Ptpn9 (Meg2) Complex With Compound 7
Length = 314
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/43 (30%), Positives = 23/43 (53%), Gaps = 5/43 (11%)
Query: 115 LIHCVAGVSRSAS-----LCLAYLIKYNQMNFHQAFHYLRSLR 152
++HC AG+ R+ + +CLA L + +N Q +R+ R
Sbjct: 237 VVHCSAGIGRTGTFCSLDICLAQLEELGTLNVFQTVSRMRTQR 279
>pdb|3ZV2|A Chain A, Human Protein-Tyrosine Phosphatase 1b C215a, S216a Mutant
Length = 320
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 14/22 (63%)
Query: 110 EGGCTLIHCVAGVSRSASLCLA 131
E G ++H AG+ RS + CLA
Sbjct: 207 EHGPVVVHAAAGIGRSGTFCLA 228
>pdb|3S4O|A Chain A, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
pdb|3S4O|B Chain B, Protein Tyrosine Phosphatase (Putative) From Leishmania
Major
Length = 167
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/37 (32%), Positives = 20/37 (54%)
Query: 116 IHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLR 152
+HCVAG+ R+ L L++Y ++ A +R R
Sbjct: 114 VHCVAGLGRAPILVALALVEYGNVSALDAIALIREKR 150
>pdb|2AHS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
pdb|2AHS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human
Tyrosine Receptor Phosphatase Beta
Length = 295
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 84 HILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASL-----CLAYLIKYNQ 138
H + T+ L + V D + + G T++HC AGV R+ + L L +
Sbjct: 195 HGVPETTQSLIQFVRTVRDYINR-SPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDS 253
Query: 139 MNFHQAFHYLRSLR 152
++ + A H LR R
Sbjct: 254 VDIYGAVHDLRLHR 267
>pdb|2H03|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2HC1|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta.
pdb|2HC2|A Chain A, Engineered Protein Tyrosine Phosphatase Beta Catalytic
Domain
Length = 291
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 84 HILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASL-----CLAYLIKYNQ 138
H + T+ L + V D + + G T++HC AGV R+ + L L +
Sbjct: 192 HGVPETTQSLIQFVRTVRDYINR-SPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDS 250
Query: 139 MNFHQAFHYLRSLR 152
++ + A H LR R
Sbjct: 251 VDIYGAVHDLRLHR 264
>pdb|2H02|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H02|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2H04|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I3R|A Chain A, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3R|B Chain B, Engineered Catalytic Domain Of Protein Tyrosine
Phosphatase Hptpbeta
pdb|2I3U|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4E|B Chain B, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With Inhibitors
pdb|2I4G|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain In Complex With A Sulfamic Acid
(Soaking Experiment)
pdb|2I4H|A Chain A, Structural Studies Of Protein Tyrosine Phosphatase Beta
Catalytic Domain Co-Crystallized With A Sulfamic Acid
Inhibitor
pdb|2I5X|A Chain A, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
pdb|2I5X|B Chain B, Engineering The Ptpbeta Catalytic Domain With Improved
Crystallization Properties
Length = 313
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 33/74 (44%), Gaps = 6/74 (8%)
Query: 84 HILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASL-----CLAYLIKYNQ 138
H + T+ L + V D + + G T++HC AGV R+ + L L +
Sbjct: 211 HGVPETTQSLIQFVRTVRDYINR-SPGAGPTVVHCSAGVGRTGTFIALDRILQQLDSKDS 269
Query: 139 MNFHQAFHYLRSLR 152
++ + A H LR R
Sbjct: 270 VDIYGAVHDLRLHR 283
>pdb|3I36|A Chain A, Crystal Structure Of Rat Protein Tyrosine Phosphatase Eta
Catalytic Domain
Length = 342
Score = 28.5 bits (62), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 52/114 (45%), Gaps = 10/114 (8%)
Query: 84 HILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLC----LAYLIK-YNQ 138
H + T+ L ++ V D +++I E L+HC AGV R+ + L Y I+ N
Sbjct: 211 HGVPDTTDLLINFRYLVRDYMKQIPPESPI-LVHCSAGVGRTGTFIAIDRLIYQIENENT 269
Query: 139 MNFHQAFHYLRSLRPCI---RPNLGFFKQLINYEKRFYAESSVEIVY-NAAAQT 188
++ + + LR RP + F Q + R +S V+++Y N A T
Sbjct: 270 VDVYGIVYDLRMHRPLMVQTEDQYVFLNQCVLDIIRAQKDSKVDLIYQNTTAMT 323
>pdb|2VSQ|A Chain A, Structure Of Surfactin A Synthetase C (Srfa-C), A
Nonribosomal Peptide Synthetase Termination Module
Length = 1304
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 97 FDQVADLVQKIKDEGGCTLIHCVAGVS 123
D+ ADL+QK++ EG TL AG S
Sbjct: 1098 LDRYADLIQKLQPEGPLTLFGYSAGCS 1124
>pdb|1JMK|C Chain C, Structural Basis For The Cyclization Of The Lipopeptide
Antibiotic Surfactin By The Thioesterase Domain Srfte
pdb|1JMK|O Chain O, Structural Basis For The Cyclization Of The Lipopeptide
Antibiotic Surfactin By The Thioesterase Domain Srfte
Length = 230
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 97 FDQVADLVQKIKDEGGCTLIHCVAGVS 123
D+ ADL+QK++ EG TL AG S
Sbjct: 57 LDRYADLIQKLQPEGPLTLFGYSAGCS 83
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.134 0.403
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,290,017
Number of Sequences: 62578
Number of extensions: 181204
Number of successful extensions: 568
Number of sequences better than 100.0: 82
Number of HSP's better than 100.0 without gapping: 74
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 491
Number of HSP's gapped (non-prelim): 82
length of query: 205
length of database: 14,973,337
effective HSP length: 94
effective length of query: 111
effective length of database: 9,091,005
effective search space: 1009101555
effective search space used: 1009101555
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)