RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy14072
(205 letters)
>2esb_A Dual specificity protein phosphatase 18; alpha/beta structure,
hydrolase; HET: EPE; 2.00A {Homo sapiens}
Length = 188
Score = 175 bits (447), Expect = 2e-56
Identities = 56/181 (30%), Positives = 104/181 (57%), Gaps = 7/181 (3%)
Query: 26 QISSNSSQLFEVTEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPDPPLADTIKTV 81
+ + ++++ L + +++ +T ++N + E+ L + I+ +
Sbjct: 9 PVQFRQPSVSGLSQITKSLYISNGVAANNKLMLSSNQITMVINVSVEVV-NTLYEDIQYM 67
Query: 82 KIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNF 141
++ + DS L +FD +AD + ++ + G TL+HC AGVSRSA+LCLAYL+KY+ M+
Sbjct: 68 QVPVADSPNSRLCDFFDPIADHIHSVEMKQGRTLLHCAAGVSRSAALCLAYLMKYHAMSL 127
Query: 142 HQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAESSVEIVYNAAAQTYIPSVYEEDYSNM 201
A + +S RP IRPN GF++QLI+YE + + +++V +V + IP +YE++ M
Sbjct: 128 LDAHTWTKSCRPIIRPNSGFWEQLIHYEFQLFGKNTVHMVSSPVG--MIPDIYEKEVRLM 185
Query: 202 L 202
+
Sbjct: 186 I 186
>2wgp_A Dual specificity protein phosphatase 14; MKP6, DUSP14, hydrolase,
dual specifici phosphatase; 1.88A {Homo sapiens}
Length = 190
Score = 175 bits (446), Expect = 3e-56
Identities = 59/175 (33%), Positives = 106/175 (60%), Gaps = 7/175 (4%)
Query: 30 NSSQLFEVTEVCPGLLLCGATMVGRTN----HPVTCIVNAAPELPDPPLADTIKTVKIHI 85
+ + + ++ L L ++ + +TCIVNA E+P+ + VK+ +
Sbjct: 19 SEGDIGGIAQITSSLFLGRGSVASNRHLLQARGITCIVNATIEIPNFNW-PQFEYVKVPL 77
Query: 86 LDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAF 145
D P+ YFD VAD + + + G TL+HC AGVSRSA+LC+AYL+K++ + +A+
Sbjct: 78 ADMPHAPIGLYFDTVADKIHSVSRKHGATLVHCAAGVSRSATLCIAYLMKFHNVCLLEAY 137
Query: 146 HYLRSLRPCIRPNLGFFKQLINYEKRFYAESSVEIVYNAAAQTYIPSVYEEDYSN 200
+++++ RP IRPN+GF++QLI+YE++ + +S+V++V +P VYE++ +
Sbjct: 138 NWVKARRPVIRPNVGFWRQLIDYERQLFGKSTVKMVQTPYGI--VPDVYEKESRH 190
>2oud_A Dual specificity protein phosphatase 10; A central five-stranded
B-sheet, hydrolase; 2.80A {Homo sapiens}
Length = 177
Score = 167 bits (424), Expect = 5e-53
Identities = 44/166 (26%), Positives = 76/166 (45%), Gaps = 7/166 (4%)
Query: 36 EVTEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPDPPLAD-TIKTVKIHILDSAT 90
E+T + P L L + ++N LP ++ DS
Sbjct: 7 ELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDSNK 66
Query: 91 EPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRS 150
+ L YF++ + +++ G LIHC AGVSRSA++ +AYL+K+ +M A+ +++
Sbjct: 67 QNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFVKG 126
Query: 151 LRPCIRPNLGFFKQLINYEKRFYAESSVEIVYNAAAQTYIPSVYEE 196
RP I PNL F QL+ +E+ + I+ + +V +E
Sbjct: 127 KRPIISPNLNFMGQLLEFEEDLNNGVTPRILTPKLMG--VETVVKE 170
>2hcm_A Dual specificity protein phosphatase; structural genomics, PSI,
protein structure INI NEW YORK SGX research center for
structural genomics; 2.00A {Mus musculus}
Length = 164
Score = 162 bits (412), Expect = 2e-51
Identities = 42/156 (26%), Positives = 76/156 (48%), Gaps = 5/156 (3%)
Query: 28 SSNSSQLFEVTEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPDPPLADTIKTVKI 83
++ + V P L + A G +T VN + + P P A + +++
Sbjct: 3 GTSEAAPPPFARVAPALFIGNARAAGATELLVRAGITLCVNVSRQQP-GPRAPGVAELRV 61
Query: 84 HILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQ 143
+ D E L ++ + ++ +GG L++C G SRSA++C AYL+++ + +
Sbjct: 62 PVFDDPAEDLLTHLEPTCAAMEAAVRDGGSCLVYCKNGRSRSAAVCTAYLMRHRGHSLDR 121
Query: 144 AFHYLRSLRPCIRPNLGFFKQLINYEKRFYAESSVE 179
AF ++S RP PNLGF+ QL YE+ A++ +
Sbjct: 122 AFQMVKSARPVAEPNLGFWAQLQKYEQTLQAQAILP 157
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A
{Homo sapiens}
Length = 149
Score = 160 bits (407), Expect = 8e-51
Identities = 41/143 (28%), Positives = 69/143 (48%), Gaps = 5/143 (3%)
Query: 34 LFEVTEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPDPPLAD-TIKTVKIHILDS 88
+ E+T + P L L + ++N LP ++ DS
Sbjct: 1 MAELTPILPFLFLGNEQDAQDLDTMQRLNIGYVINVTTHLPLYHYEKGLFNYKRLPATDS 60
Query: 89 ATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYL 148
+ L YF++ + +++ G LIHC AGVSRSA++ +AYL+K+ +M A+ ++
Sbjct: 61 NKQNLRQYFEEAFEFIEEAHQCGKGLLIHCQAGVSRSATIVIAYLMKHTRMTMTDAYKFV 120
Query: 149 RSLRPCIRPNLGFFKQLINYEKR 171
+ RP I PNL F QL+ +E+
Sbjct: 121 KGKRPIISPNLNFMGQLLEFEED 143
>2r0b_A Serine/threonine/tyrosine-interacting protein; structural genomics,
phosphatase, PSI-2, protein structure initiative; 1.60A
{Homo sapiens}
Length = 154
Score = 157 bits (398), Expect = 2e-49
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 10/150 (6%)
Query: 36 EVTEVCPGLLLCGATMVGRTNHP------VTCIVNAAPELP----DPPLADTIKTVKIHI 85
E+ E+ PGL L + ++ P +T I+ + P + + + I
Sbjct: 5 EMQEILPGLFLGPYSSAMKSKLPVLQKHGITHIICIRQNIEANFIKPNFQQLFRYLVLDI 64
Query: 86 LDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAF 145
D+ E + +F + + GG L+H AG+SRSA+ +AY+++ M + AF
Sbjct: 65 ADNPVENIIRFFPMTKEFIDGSLQMGGKVLVHGNAGISRSAAFVIAYIMETFGMKYRDAF 124
Query: 146 HYLRSLRPCIRPNLGFFKQLINYEKRFYAE 175
Y++ R CI PN GF QL YE + A+
Sbjct: 125 AYVQERRFCINPNAGFVHQLQEYEAIYLAK 154
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase;
2.10A {Homo sapiens}
Length = 145
Score = 155 bits (395), Expect = 4e-49
Identities = 37/141 (26%), Positives = 58/141 (41%), Gaps = 5/141 (3%)
Query: 38 TEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPDPPLADTIKTVKIHILDSATEPL 93
T++ + L N V I+N E+ + I + D L
Sbjct: 5 TQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREID-NFFPGVFEYHNIRVYDEEATDL 63
Query: 94 DSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRP 153
+Y++ + K K G L+H GVSRSAS +AY +K N +A+ Y++ R
Sbjct: 64 LAYWNDTYKFISKAKKHGSKCLVHSKMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRT 123
Query: 154 CIRPNLGFFKQLINYEKRFYA 174
+PN F +QL Y+ A
Sbjct: 124 VTKPNPSFMRQLEEYQGILLA 144
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase,
nucleus; 2.90A {Homo sapiens} PDB: 1m3g_A
Length = 144
Score = 155 bits (395), Expect = 4e-49
Identities = 40/141 (28%), Positives = 69/141 (48%), Gaps = 5/141 (3%)
Query: 38 TEVCPGLLLCGATMVGRT----NHPVTCIVNAAPELPDPPLADTIKTVKIHILDSATEPL 93
E+ P L L A R +T ++N + + P + I + D+ +
Sbjct: 5 VEILPFLYLGSAYHAARRDMLDALGITALLNVSSDCP-NHFEGHYQYKCIPVEDNHKADI 63
Query: 94 DSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRP 153
S+F + + + +KD G L+H AG+SRSA++CLAYL+ ++ +AF +++ R
Sbjct: 64 SSWFMEAIEYIDAVKDCRGRVLVHSQAGISRSATICLAYLMMKKRVRLEEAFEFVKQRRS 123
Query: 154 CIRPNLGFFKQLINYEKRFYA 174
I PN F QL+ +E + A
Sbjct: 124 IISPNFSFMGQLLQFESQVLA 144
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase;
HET: BOG; 2.40A {Homo sapiens}
Length = 160
Score = 155 bits (395), Expect = 7e-49
Identities = 34/149 (22%), Positives = 66/149 (44%), Gaps = 6/149 (4%)
Query: 36 EVTEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPDPPLADTIKTVKIHILDSATE 91
+T+V PGL L + +T I++ PL I ++I + D+
Sbjct: 7 GMTKVLPGLYLGNFIDAKDLDQLGRNKITHIISIHESPQ--PLLQDITYLRIPVADTPEV 64
Query: 92 PLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSL 151
P+ +F + + + + GG L+H AG+SRS ++ AY++ + + +++
Sbjct: 65 PIKKHFKECINFIHCCRLNGGNCLVHSFAGISRSTTIVTAYVMTVTGLGWRDVLEAIKAT 124
Query: 152 RPCIRPNLGFFKQLINYEKRFYAESSVEI 180
RP PN GF +QL + + ++
Sbjct: 125 RPIANPNPGFRQQLEEFGWASSQKLRRQL 153
>1wrm_A Dual specificity phosphatase 22; DSP, JNK, hydrolase; HET: MES;
1.50A {Homo sapiens}
Length = 165
Score = 155 bits (395), Expect = 9e-49
Identities = 38/144 (26%), Positives = 69/144 (47%), Gaps = 6/144 (4%)
Query: 36 EVTEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPDPPLADTIKTVKIHILDSATE 91
+ ++ PGL + + + VT I++ + +K + I DS ++
Sbjct: 6 GMNKILPGLYIGNFKDARDAEQLSKNKVTHILSVHDSARPML--EGVKYLCIPAADSPSQ 63
Query: 92 PLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSL 151
L +F + + + + G L+HC+AGVSRS +L +AY++ + A H +R+
Sbjct: 64 NLTRHFKESIKFIHECRLRGESCLVHCLAGVSRSVTLVIAYIMTVTDFGWEDALHTVRAG 123
Query: 152 RPCIRPNLGFFKQLINYEKRFYAE 175
R C PN+GF +QL +EK +
Sbjct: 124 RSCANPNVGFQRQLQEFEKHEVHQ 147
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine
phosphatase, hydrolase; 1.26A {Homo sapiens}
Length = 144
Score = 155 bits (393), Expect = 9e-49
Identities = 42/140 (30%), Positives = 68/140 (48%), Gaps = 5/140 (3%)
Query: 36 EVTEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPDPPLADTIKTVKIHILDSATE 91
+V + P LLL + VT I+N A + I ILD
Sbjct: 3 QVGVIKPWLLLGSQDAAHDLDTLKKNKVTHILNVAYGVE-NAFLSDFTYKSISILDLPET 61
Query: 92 PLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSL 151
+ SYF + + +++ K + G L+H AGVSR+A++ + +L+ Q +F AF +++
Sbjct: 62 NILSYFPECFEFIEEAKRKDGVVLVHSNAGVSRAAAIVIGFLMNSEQTSFTSAFSLVKNA 121
Query: 152 RPCIRPNLGFFKQLINYEKR 171
RP I PN GF +QL Y++
Sbjct: 122 RPSICPNSGFMEQLRTYQEG 141
>3emu_A Leucine rich repeat and phosphatase domain containing protein;
structural genomics, hydrolase, PSI-2, protein structure
initiative; 2.30A {Entamoeba histolytica}
Length = 161
Score = 153 bits (390), Expect = 3e-48
Identities = 29/144 (20%), Positives = 60/144 (41%), Gaps = 5/144 (3%)
Query: 38 TEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPDPPLADTIKTVKIHILDSATEPL 93
T++ + L N+ ++ I+ E+P D +++ I+ L
Sbjct: 11 TQIIQYIHLGSFLNAHNVDYIHNNNISSILLVGIEVP-SLFKDQCDILRLDIVSEEGHQL 69
Query: 94 DSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRP 153
+ + LI GV+++ ++ +A+L+ Y +++F AF+ ++ L P
Sbjct: 70 YDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGLYP 129
Query: 154 CIRPNLGFFKQLINYEKRFYAESS 177
I GF QL +EK+ +S
Sbjct: 130 LIDIESGFILQLKLFEKKLEKMNS 153
>2g6z_A Dual specificity protein phosphatase 5; alpha/beta, hydrolase;
2.70A {Homo sapiens}
Length = 211
Score = 155 bits (394), Expect = 4e-48
Identities = 42/146 (28%), Positives = 70/146 (47%), Gaps = 5/146 (3%)
Query: 38 TEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPDPPLADTIKTVKIHILDSATEPL 93
E+ P L L A + N +T ++N + + I + DS T +
Sbjct: 7 VEILPFLYLGSAYHASKCEFLANLHITALLNVSRRTS-EACMTHLHYKWIPVEDSHTADI 65
Query: 94 DSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRP 153
S+F + D + ++++GG L+H AG+SRS ++C+AYL+K Q +AF Y++ R
Sbjct: 66 SSHFQEAIDFIDCVREKGGKVLVHSEAGISRSPTICMAYLMKTKQFRLKEAFDYIKQRRS 125
Query: 154 CIRPNLGFFKQLINYEKRFYAESSVE 179
+ PN GF QL+ YE +
Sbjct: 126 MVSPNFGFMGQLLQYESEILPSTPNP 151
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase,
structural genomics, PSI-2, protein structure
initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Length = 155
Score = 153 bits (389), Expect = 5e-48
Identities = 33/139 (23%), Positives = 65/139 (46%), Gaps = 5/139 (3%)
Query: 38 TEVCPGLLLCGATMVGR----TNHPVTCIVNAAPELPD-PPLADTIKTVKIHILDSATEP 92
++ P L L A + I+N P LP+ +I I D ++
Sbjct: 7 VQILPNLYLGSARDSANLESLAKLGIRYILNVTPNLPNFFEKNGDFHYKQIPISDHWSQN 66
Query: 93 LDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLR 152
L +F + + + + + L+H +AGVSRS ++ +AYL++ ++ + A+ ++ +
Sbjct: 67 LSRFFPEAIEFIDEALSQNCGVLVHSLAGVSRSVTVTVAYLMQKLHLSLNDAYDLVKRKK 126
Query: 153 PCIRPNLGFFKQLINYEKR 171
I PN F QL+++E+
Sbjct: 127 SNISPNFNFMGQLLDFERS 145
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 146 bits (370), Expect = 3e-45
Identities = 30/153 (19%), Positives = 59/153 (38%), Gaps = 13/153 (8%)
Query: 38 TEVCPGLLLCGATMVGRT-----NHPVTCIVNAAPELPDPPLADT--------IKTVKIH 84
+ +LL + T + V ++ E L +T ++ +++
Sbjct: 3 HRIDHTVLLGALPLKNMTRRLVLDENVRGVITMNEEYETRFLCNTSKEWKKAGVEQLRLS 62
Query: 85 ILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQA 144
+D P + + K + G C +HC AG SRSA++ AYLI+ + + +A
Sbjct: 63 TVDMTGVPTLANLHKGVQFALKYQALGQCVYVHCKAGRSRSATMVAAYLIQVHNWSPEEA 122
Query: 145 FHYLRSLRPCIRPNLGFFKQLINYEKRFYAESS 177
+ +R I + L + K A ++
Sbjct: 123 IEAIAKIRSHISIRPSQLEVLKEFHKEITARAA 155
>2q05_A Late protein H1, dual specificity protein phosphatase; structural
genomics, APC7320, P protein structure initiative; HET:
MSE; 2.57A {Vaccinia virus WR}
Length = 195
Score = 146 bits (369), Expect = 2e-44
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 10/166 (6%)
Query: 12 KKPWQFFSSTKNHPQISSNSSQLFEVTEVCPGLLLCGATMVGRTN---HPVTCIVNAAPE 68
KK + ++ + S +T V + L ++N +
Sbjct: 25 KKSLYKYLLLRSTGDMHRAKSPTI-MTRVTNNVYLGNYKNAMDAPSSEVKFKYVLNLTMD 83
Query: 69 LPDPPLADTIKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASL 128
P I + I ++D T + YFD V + K L+HC AGV+RS ++
Sbjct: 84 KYTLP-NSNINIIHIPLVDDTTTDISKYFDDVTAFLSKCDQRNEPVLVHCAAGVNRSGAM 142
Query: 129 CLAYLIKYNQMN-----FHQAFHYLRSLRPCIRPNLGFFKQLINYE 169
LAYL+ N+ + F +H +R LR N F +Q+I
Sbjct: 143 ILAYLMSKNKESLPMLYFLYVYHSMRDLRGAFVENPSFKRQIIEKY 188
>3cm3_A Late protein H1, dual specificity protein phosphatase;
dual-specificity phosphatase, VH1, hydrolase; 1.32A
{Vaccinia virus} PDB: 2rf6_A 2p4d_A
Length = 176
Score = 144 bits (366), Expect = 2e-44
Identities = 35/148 (23%), Positives = 59/148 (39%), Gaps = 9/148 (6%)
Query: 30 NSSQLFEVTEVCPGLLLCGATMVGRTN---HPVTCIVNAAPELPDPPLADTIKTVKIHIL 86
+ +T V + L ++N + P ++ I + I ++
Sbjct: 25 KAKSPTIMTRVTNNVYLGNYKNAMDAPSSEVKFKYVLNLTMDKYTLPNSN-INIIHIPLV 83
Query: 87 DSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMN-----F 141
D T + YFD V + K L+H AGV+RS ++ LAYL+ N+ + F
Sbjct: 84 DDTTTDISKYFDDVTAFLSKCDQRNEPVLVHSAAGVNRSGAMILAYLMSKNKESLPMLYF 143
Query: 142 HQAFHYLRSLRPCIRPNLGFFKQLINYE 169
+H +R LR N F +Q+I
Sbjct: 144 LYVYHSMRDLRGAFVENPSFKRQIIEKY 171
>2y96_A Dual specificity phosphatase DUPD1; hydrolase; 2.38A {Homo sapiens}
Length = 219
Score = 145 bits (367), Expect = 6e-44
Identities = 46/173 (26%), Positives = 68/173 (39%), Gaps = 12/173 (6%)
Query: 14 PWQFFSSTKNHPQISSNSSQLFEVTEVCPGLLLCGATMVGRT----NHPVTCIVNAAPEL 69
+ + + S Q V EV P L + T ++NAA
Sbjct: 31 DYCTPGAFELERLFWKGSPQYTHVNEVWPKLYIGDEATALDRYRLQKAGFTHVLNAAHGR 90
Query: 70 ------PDPPLADTIKTVKIHILDSATEPLDSYFDQVADLVQK-IKDEGGCTLIHCVAGV 122
PD I+ + D T L +F A + + + D+ L+HCV G
Sbjct: 91 WNVDTGPDYYRDMDIQYHGVEADDLPTFDLSVFFYPAAAFIDRALSDDHSKILVHCVMGR 150
Query: 123 SRSASLCLAYLIKYNQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAE 175
SRSA+L LAYL+ + M A + R C+ PN GF KQL +K+ +
Sbjct: 151 SRSATLVLAYLMIHKDMTLVDAIQQVAKNR-CVLPNRGFLKQLRELDKQLVQQ 202
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein
dual-specificity phosphatase, inhibitor; HET: STT; 1.90A
{Homo sapiens} PDB: 1vhr_A* 1j4x_A*
Length = 183
Score = 143 bits (363), Expect = 1e-43
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 19/186 (10%)
Query: 7 FQENVKKPWQFFSSTKNHPQISSNSSQLFEVTEVCPGLLLCGATMVGRT----NHPVTCI 62
F+ +V+ S + S EV P + + A++ +T +
Sbjct: 3 FELSVQDLNDLLSDGSGCYSLPSQ-----PCNEVTPRIYVGNASVAQDIPKLQKLGITHV 57
Query: 63 VNAAPELPDPPL--------ADTIKTVKIHILDSATEPLDSYFDQVADLVQK-IKDEGGC 113
+NAA + I + I D+ L +YF++ AD + + + + G
Sbjct: 58 LNAAEGRSFMHVNTNANFYKDSGITYLGIKANDTQEFNLSAYFERAADFIDQALAQKNGR 117
Query: 114 TLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFY 173
L+HC G SRS +L +AYL+ +M+ A +R R I PN GF QL R
Sbjct: 118 VLVHCREGYSRSPTLVIAYLMMRQKMDVKSALSIVRQNRE-IGPNDGFLAQLCQLNDRLA 176
Query: 174 AESSVE 179
E ++
Sbjct: 177 KEGKLK 182
>2e0t_A Dual specificity phosphatase 26; conserved hypothetical protein,
structural genomics, NPPSFA, project on protein
structural and functional analyses; 1.67A {Homo sapiens}
Length = 151
Score = 142 bits (360), Expect = 1e-43
Identities = 44/148 (29%), Positives = 69/148 (46%), Gaps = 10/148 (6%)
Query: 37 VTEVCPGLLLCGATMVGRT----NHPVTCIVNAAPE----LPDPPLADTIKTVKIHILDS 88
EV PGL L M +T ++NA+ P+ I+ + + DS
Sbjct: 2 ADEVWPGLYLGDQDMANNRRELRRLGITHVLNASHSRWRGTPEAYEGLGIRYLGVEAHDS 61
Query: 89 ATEPLDSYFDQVADLVQK-IKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHY 147
+ +F AD + + + GG L+HC GVSRSA+L LAYL+ Y+ + +A
Sbjct: 62 PAFDMSIHFQTAADFIHRALSQPGGKILVHCAVGVSRSATLVLAYLMLYHHLTLVEAIKK 121
Query: 148 LRSLRPCIRPNLGFFKQLINYEKRFYAE 175
++ R I PN GF +QL+ ++R
Sbjct: 122 VKDHRGII-PNRGFLRQLLALDRRLRQG 148
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 141 bits (358), Expect = 5e-43
Identities = 29/155 (18%), Positives = 59/155 (38%), Gaps = 3/155 (1%)
Query: 23 NHPQISSNSSQLFEVTEVCPGLLLCGATMVGRTNHPVTCIVNAAPELPDP-PLADTIKTV 81
+ V P + + + P ++N A E D ++
Sbjct: 30 PCSSLDVRRIYPKGPLLVLPEKIYLYSEPTVKELLPFDVVINVAEEANDLRMQVPAVEYH 89
Query: 82 KIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNF 141
+ + ++ + LIH G+SRSA+L +AY++KY+ ++
Sbjct: 90 HYRWEH--DSQIALDLPSLTSIIHAATTKREKILIHAQCGLSRSATLIIAYIMKYHNLSL 147
Query: 142 HQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAES 176
++ L+S I P++G QL+ +E A++
Sbjct: 148 RHSYDLLKSRADKINPSIGLIFQLMEWEVALNAKT 182
>2pq5_A Dual specificity protein phosphatase 13; hydrolase, dual
specificity phosphatase, DUSP13, testis and skeletal
muscle specific DSP; 2.30A {Homo sapiens} PDB: 2gwo_A
Length = 205
Score = 141 bits (357), Expect = 1e-42
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 12/159 (7%)
Query: 29 SNSSQLFEVTEVCPGLLLCGATMVGRT----NHPVTCIVNAAPELPDPPL------ADTI 78
++ L + EV P L L A +T +VNAA ++
Sbjct: 38 RQAATLNHIDEVWPSLFLGDAYAARDKSKLIQLGITHVVNAAAGKFQVDTGAKFYRGMSL 97
Query: 79 KTVKIHILDSATEPLDSYFDQVADLVQK-IKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
+ I D+ L YF VA ++ + G L+HC GVSRSA+L LA+L+ Y
Sbjct: 98 EYYGIEADDNPFFDLSVYFLPVARYIRAALSVPQGRVLVHCAMGVSRSATLVLAFLMIYE 157
Query: 138 QMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAES 176
M +A +++ R I PN GF +QL + R E+
Sbjct: 158 NMTLVEAIQTVQAHRN-ICPNSGFLRQLQVLDNRLGRET 195
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 84.0 bits (208), Expect = 5e-21
Identities = 28/141 (19%), Positives = 49/141 (34%), Gaps = 8/141 (5%)
Query: 38 TEVCPGLLLCGATMVGRT------NHPVTCIVNAAPELPDPPLADT-IKTVKIHILDSAT 90
+ V PG L A + V +V+ P + + ++ I D
Sbjct: 10 SWVLPGRLAGLALPRLPAHYQFLLDLGVRHLVSLTERGPPHSDSCPGLTLHRLRIPDFCP 69
Query: 91 EPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRS 150
P D+ +V + G +HC G R+ ++ YL+K + A +R
Sbjct: 70 -PAPDQIDRFVQIVDEANARGEAVGVHCALGFGRTGTMLACYLVKERGLAAGDAIAEIRR 128
Query: 151 LRPCIRPNLGFFKQLINYEKR 171
LRP K + + +R
Sbjct: 129 LRPGSIETYEQEKAVFQFYQR 149
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 86.0 bits (212), Expect = 1e-20
Identities = 27/173 (15%), Positives = 51/173 (29%), Gaps = 21/173 (12%)
Query: 37 VTEVCPGLLLCGATMVGRTNHP------VTCIVNAAPEL-------------PDPPLADT 77
+ P L++ G+ + + V I +
Sbjct: 13 YNFIRPDLIV-GSCLQTPEDVDKLRKIGVKTIFCLQQDPDLEYFGVDISSIQAYAKKYSD 71
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQK-IKDEGGCTLIHCVAGVSRSASLCLAYLIKY 136
I+ ++ I D L V + K +K GG T +H AG+ R+ ++ L Y+
Sbjct: 72 IQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGGVTYVHSTAGMGRAPAVALTYMFWV 131
Query: 137 NQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRFYAESSVEIVYNAAAQTY 189
+A L S R C I+ ++ + +
Sbjct: 132 QGYKLMEAHKLLMSKRSCFPKLDAIRNATIDILTGLKRKTVTLTLKDKGFSRV 184
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 72.4 bits (177), Expect = 2e-15
Identities = 26/125 (20%), Positives = 48/125 (38%), Gaps = 11/125 (8%)
Query: 56 NHPVTCIVNAAPELPDPPL--ADTIKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGC 113
NH VT I+ + D + D +T V + + ++ G
Sbjct: 216 NHNVTTIIRLNKRMYDAKRFTDAGFDHHDLFFADGSTPT----DAIVKEFLDICENAEGA 271
Query: 114 TLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRP--CIRPNLGFFKQLINYEKR 171
+H AG+ R+ +L Y++K+ +M + ++R RP I P F L+ +
Sbjct: 272 IAVHSKAGLGRTGTLIACYIMKHYRMTAAETIAWVRICRPGSVIGPQQQF---LVMKQTN 328
Query: 172 FYAES 176
+ E
Sbjct: 329 LWLEG 333
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 61.0 bits (148), Expect = 4e-12
Identities = 15/57 (26%), Positives = 28/57 (49%)
Query: 98 DQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPC 154
Q +++ + E L+HCV G+ R+ ++ +YLI + A +R +RP
Sbjct: 76 SQFLTIMKWLLSEKEGNLVHCVGGIGRTGTILASYLILTEGLEVESAIDEVRLVRPG 132
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 59.0 bits (142), Expect = 6e-11
Identities = 19/96 (19%), Positives = 33/96 (34%), Gaps = 2/96 (2%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKIKDEGGCTLI--HCVAGVSRSASLCLAYLIK 135
IK +K+ P + L ++ + LI HC G +R+ L A+L++
Sbjct: 106 IKYIKLQCKGHGECPTTENTETFIRLCERFNERNPPELIGVHCTHGFNRTGFLICAFLVE 165
Query: 136 YNQMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKR 171
+ A RP + K+L
Sbjct: 166 KMDWSIEAAVATFAQARPPGIYKGDYLKELFRRYGD 201
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 53.1 bits (127), Expect = 3e-09
Identities = 21/123 (17%), Positives = 40/123 (32%), Gaps = 14/123 (11%)
Query: 59 VTCIVNAAPELPDPPL--ADTIKTVKIHILDSATEPLDSYFDQVADLVQKIK-------D 109
V +V D L + I D A + L ++
Sbjct: 48 VRHLVRVCGPTYDATLVKSRGIDVHSWPFDDGAPPTRAVLDSWLKLLDTELARQQEDPSV 107
Query: 110 EGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPC--IRPNLGFFKQLIN 167
+HCVAG+ R+ L L++Y ++ A +R R + + + +
Sbjct: 108 PPPTIGVHCVAGLGRAPILVALALVEYGNVSALDAIALIREKRKGAINQTQMHW---ITK 164
Query: 168 YEK 170
Y++
Sbjct: 165 YKR 167
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 51.2 bits (122), Expect = 2e-08
Identities = 24/109 (22%), Positives = 37/109 (33%), Gaps = 12/109 (11%)
Query: 56 NHPVTCIVNA----------APELPDPPLADTIKTVKIHILDSATEPLDSYFDQVADLVQ 105
+ + I P L D I T I D T P + ++ + +
Sbjct: 69 SCGIQDIFVFCTRGELSKYRVPNLLDLYQQCGIITHHHPIADGGT-PDIASCCEIMEELT 127
Query: 106 KIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQ-MNFHQAFHYLRSLRP 153
TLIH G+ RS + L+ + ++ QA LR LR
Sbjct: 128 TCLKNYRKTLIHSYGGLGRSCLVAACLLLYLSDTISPEQAIDSLRDLRG 176
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine
phosphatase, P-loop, hydrolase; HET: PO4; 1.50A
{Autographa californicanucleopolyhedrovirus}
Length = 169
Score = 50.7 bits (121), Expect = 2e-08
Identities = 18/90 (20%), Positives = 34/90 (37%), Gaps = 3/90 (3%)
Query: 78 IKTVKIHILDSATEPLDSYFDQVADLVQKI--KDEGGCTLIHCVAGVSRSASLCLAYLIK 135
+ KI + T P +S + D V++ K G +HC G++R+ + YL+
Sbjct: 79 LLYKKIQV-PGQTLPPESIVQEFIDTVKEFTEKCPGMLVGVHCTHGINRTGYMVCRYLMH 137
Query: 136 YNQMNFHQAFHYLRSLRPCIRPNLGFFKQL 165
+ +A R + + L
Sbjct: 138 TLGIAPQEAIDRFEKARGHKIERQNYVQDL 167
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual
specific phosphatase, COMP with peptide, hydrolase;
2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Length = 189
Score = 50.5 bits (120), Expect = 4e-08
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 6/100 (6%)
Query: 59 VTCIV--NAAPELPDPPLADTIKTVKIHILDSATEPLD--SYFDQVADLVQKIKDEGGCT 114
VT IV A + I + D A + + + + ++ G C
Sbjct: 62 VTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFR-EEPGCCI 120
Query: 115 LIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPC 154
+HCVAG+ R+ L LI+ M + A ++R R
Sbjct: 121 AVHCVAGLGRAPVLVALALIEGG-MKYEDAVQFIRQKRRG 159
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 49.6 bits (118), Expect = 5e-08
Identities = 23/100 (23%), Positives = 38/100 (38%), Gaps = 6/100 (6%)
Query: 59 VTCIVNA--APELPDPPLADTIKTVKIHILDSATEPLD--SYFDQVADLVQKIKDEGGCT 114
VT IV A + I + D A + + + + ++ G C
Sbjct: 41 VTTIVRVCEATYDTTLVEKEGIHVLDWPFDDGAPPSNQIVDDWLSLVKIKFR-EEPGCCI 99
Query: 115 LIHCVAGVSRSASLCLAYLIKYNQMNFHQAFHYLRSLRPC 154
+HCVAG+ R+ L LI+ M + A ++R R
Sbjct: 100 AVHCVAGLGRAPVLVALALIEGG-MKYEDAVQFIRQKRRG 138
>3n0a_A Tyrosine-protein phosphatase auxilin; phosphatase-like domain, C2
domain, hydrolase; 2.20A {Bos taurus}
Length = 361
Score = 38.0 bits (87), Expect = 0.001
Identities = 17/105 (16%), Positives = 35/105 (33%), Gaps = 3/105 (2%)
Query: 56 NHPVTCIVNAAPELPDPPLADTIKTVKIHILDSATEPLDSYFDQVADLVQKIK-DEGGCT 114
+ + N +P+ + + L + F ++ + +
Sbjct: 60 HLDHYTVYNLSPKSYRTAKFH-SRVSECSWPIRQAPSLHNLFAVCRNMYNWLLQNPKNVC 118
Query: 115 LIHCVAGVSRSASLCLAYLIKYNQ-MNFHQAFHYLRSLRPCIRPN 158
++HC+ G + S+ L A I N A L + RP I +
Sbjct: 119 VVHCLDGRAASSILVGAMFIFCNLYSTPGPAVRLLYAKRPGIGLS 163
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 37.0 bits (86), Expect = 0.003
Identities = 16/72 (22%), Positives = 29/72 (40%), Gaps = 7/72 (9%)
Query: 92 PLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLC-LAYLIKYNQMNFHQA---FHY 147
P+ S F+ + + ++ G T++H G + LC L L Q+ A F
Sbjct: 500 PISSTFELINVIKEEALTRDGPTIVHDEYGAVSAGMLCALTTLS--QQLENENAVDVFQV 557
Query: 148 LRSLRPCIRPNL 159
+ + RP +
Sbjct: 558 AKMINLM-RPGV 568
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 36.6 bits (84), Expect = 0.004
Identities = 10/91 (10%), Positives = 27/91 (29%), Gaps = 2/91 (2%)
Query: 92 PLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLI-KYNQMNFHQAFHYLRS 150
P D+ + + + H AGV R+ + + + K ++ +
Sbjct: 195 PTPENIDRFLAFYRTL-PQDAWLHFHSEAGVGRTTAFMVMTDMLKNPSVSLKDILYRQHE 253
Query: 151 LRPCIRPNLGFFKQLINYEKRFYAESSVEIV 181
+ + + K Y + ++
Sbjct: 254 IGGFYYGEFPIKTKDKDSWKTKYYREKIVMI 284
>3v0d_A Voltage-sensor containing phosphatase; PTP, hydrolase; HET: PO4;
1.10A {Ciona intestinalis} PDB: 3v0f_A* 3v0g_A 3v0h_A*
3awf_A 3v0j_A 3awe_A 3awg_A 3v0e_A 3v0i_A
Length = 339
Score = 36.6 bits (83), Expect = 0.004
Identities = 17/105 (16%), Positives = 31/105 (29%), Gaps = 3/105 (2%)
Query: 54 RTNHPVTCIVNAAPELPDPPLADTIKTVKIHILDSATEPLDSYFDQVADLVQKIK-DEGG 112
+ + D D ++ I D L + D + D
Sbjct: 62 KHPDKFRIYNLCSERGYDETKFD-NHVYRVMIDDHNVPTLVDLLKFIDDAKVWMTSDPDH 120
Query: 113 CTLIHCVAGVSRSASLCLAYLIKYNQM-NFHQAFHYLRSLRPCIR 156
IH G R+ +L ++L++ + +A Y S R
Sbjct: 121 VIAIHSKGGKGRTGTLVSSWLLEDGKFDTAKEALEYFGSRRTDFE 165
>1d5r_A Phosphoinositide phosphotase PTEN; C2 domain, phosphotidylinositol,
hydrolase; HET: TLA; 2.10A {Homo sapiens} SCOP: b.7.1.1
c.45.1.1
Length = 324
Score = 36.0 bits (82), Expect = 0.005
Identities = 12/51 (23%), Positives = 22/51 (43%), Gaps = 1/51 (1%)
Query: 108 KDEGGCTLIHCVAGVSRSASLCLAYLIK-YNQMNFHQAFHYLRSLRPCIRP 157
+D+ IHC AG R+ + AYL+ + +A + +R +
Sbjct: 108 EDDNHVAAIHCKAGKGRTGVMICAYLLHRGKFLKAQEALDFYGEVRTRDKK 158
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 35.9 bits (82), Expect = 0.008
Identities = 11/85 (12%), Positives = 28/85 (32%), Gaps = 2/85 (2%)
Query: 92 PLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRS-ASLCLAYLIKYNQMNFHQAFHYLRS 150
P + D+ + + + HC AG R+ A + + ++K ++
Sbjct: 512 PSAANIDEFINFTRTMPANAWL-HFHCQAGAGRTTAYMAMYDMMKNPDVSLGDILSRQYL 570
Query: 151 LRPCIRPNLGFFKQLINYEKRFYAE 175
L + ++ +Y +
Sbjct: 571 LGGNYVAYEIAKPKPDQWKADYYHQ 595
Score = 33.6 bits (76), Expect = 0.034
Identities = 10/49 (20%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Query: 92 PLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMN 140
P D D+ + + + + HC AG+ R+ + + I N +
Sbjct: 214 PDDPDVDKFLEFYKSLPKDAWL-HYHCYAGMGRTTIFMVMHDILKNAKD 261
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 34.6 bits (79), Expect = 0.021
Identities = 38/210 (18%), Positives = 62/210 (29%), Gaps = 76/210 (36%)
Query: 1 MKTEEIFQE-NVKKPWQFFSS-------TKN-HPQISSNSSQLFEVTEVCPGLLLCGATM 51
+KTE+IF+E N F S T+ P ++ FE + GL+ AT
Sbjct: 1701 LKTEKIFKEINEHSTSYTFRSEKGLLSATQFTQPALTLMEKAAFEDLKSK-GLIPADATF 1759
Query: 52 VGRTNHPV------TCIVNAAPELPDPPLADTIKTVKI--HILDSATEPLDSYFDQVADL 103
G H + + + + + ++ V + A
Sbjct: 1760 AG---HSLGEYAALASLADV---MS---IESLVEVVFYRGMTMQVAVP------------ 1798
Query: 104 VQKIKDEGGCTLIHCVA-GVSR-SASLCLAYLIKYNQMNFHQAFHYLRSLRPCIRPNLGF 161
+DE G + +A R +AS L + + G+
Sbjct: 1799 ----RDELGRSNYGMIAINPGRVAASFSQEALQYVVE---------------RVGKRTGW 1839
Query: 162 FKQLINYEKRFYAESSVEIV-YNAAAQTYI 190
VEIV YN Q Y+
Sbjct: 1840 L---------------VEIVNYNVENQQYV 1854
Score = 32.7 bits (74), Expect = 0.082
Identities = 17/79 (21%), Positives = 26/79 (32%), Gaps = 20/79 (25%)
Query: 58 PVTCIVNAA------PELPDPPLADTIKTVKIH----ILDSATEPLDSYFD-----QVAD 102
PV + + + + D I + + AT LD F +
Sbjct: 458 PVYDTFDGSDLRVLSGSIS-ERIVDCIIRLPVKWETTTQFKATHILD--FGPGGASGLGV 514
Query: 103 LVQKIKDEGGCTLIHCVAG 121
L + KD G +I VAG
Sbjct: 515 LTHRNKDGTGVRVI--VAG 531
Score = 31.2 bits (70), Expect = 0.26
Identities = 17/95 (17%), Positives = 28/95 (29%), Gaps = 32/95 (33%)
Query: 94 DSYFDQVADL-------VQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQAFH 146
D YF+++ DL V + TL + + + F Q +
Sbjct: 167 DDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKV------------FTQGLN 214
Query: 147 YLRSLR-PCIRPNLGFFK------------QLINY 168
L L P P+ + QL +Y
Sbjct: 215 ILEWLENPSNTPDKDYLLSIPISCPLIGVIQLAHY 249
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 33.9 bits (78), Expect = 0.033
Identities = 13/58 (22%), Positives = 26/58 (44%), Gaps = 5/58 (8%)
Query: 105 QKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQA---FHYLRSLRPCIRPNL 159
++ + G +HC AGV R+ ++ +M + F +++LR RP +
Sbjct: 494 KEQFGQDGPITVHCSAGVGRTGVFITLSIV-LERMRYEGVVDMFQTVKTLRTQ-RPAM 549
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 33.7 bits (76), Expect = 0.035
Identities = 35/250 (14%), Positives = 67/250 (26%), Gaps = 100/250 (40%)
Query: 6 IFQENVKKP-------WQFFSSTKNHPQISSNSSQLFEVTEVCPGLLLCGATMVGRTNHP 58
+F + P W + + + V + L ++V +
Sbjct: 380 VFPPSAHIPTILLSLIWF---------DVIKSDVMVV-VNK------LHKYSLVEKQPKE 423
Query: 59 VTCIVNAAPELPDPPLADTIKT---VKIH--ILDS------------ATEPLDSYF---- 97
T +P L +K +H I+D LD YF
Sbjct: 424 STI------SIPSIYLELKVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHI 477
Query: 98 ---------DQVADLV-----------QKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYN 137
+ L QKI+ + T + + + L L Y
Sbjct: 478 GHHLKNIEHPERMTLFRMVFLDFRFLEQKIRHDS--TAWNASGSILNT----LQQLKFY- 530
Query: 138 QMNFHQAFHYLRSLRPCIRPNLGFFKQLINYEKRF---YAESSVE-----IVYNAAAQTY 189
+P I N +++L+N F E+ + ++ A
Sbjct: 531 --------------KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLL-RIALMAE 575
Query: 190 IPSVYEEDYS 199
+++EE +
Sbjct: 576 DEAIFEEAHK 585
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 33.1 bits (76), Expect = 0.052
Identities = 15/63 (23%), Positives = 26/63 (41%), Gaps = 7/63 (11%)
Query: 102 DLVQKIKDE--GGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQA---FHYLRSLRPCIR 156
VQK + + +HC AG R+ + I ++ F ++SLR R
Sbjct: 507 AAVQKQQQQTGNHPITVHCSAGAGRTGTFIALSNI-LERVKAEGLLDVFQAVKSLRLQ-R 564
Query: 157 PNL 159
P++
Sbjct: 565 PHM 567
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 31.6 bits (72), Expect = 0.15
Identities = 11/67 (16%), Positives = 20/67 (29%), Gaps = 5/67 (7%)
Query: 96 YFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCLAYLIKYNQMNFHQA---FHYLRSLR 152
Q + LIHC G ++ C + + F +++LR
Sbjct: 524 KLPQKNSSEGNKHHKSTPLLIHCRDGSQQTGIFCALLNL-LESAETEEVVDIFQVVKALR 582
Query: 153 PCIRPNL 159
R +
Sbjct: 583 KA-RLGM 588
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 28.0 bits (63), Expect = 2.1
Identities = 13/64 (20%), Positives = 27/64 (42%), Gaps = 6/64 (9%)
Query: 95 SYFDQVADLVQKIKD--EGGCTLIHCVAGVSRSASLCLAY----LIKYNQMNFHQAFHYL 148
+L+ IK+ L+HC AG+ R+ +L AY I+ + + +
Sbjct: 204 ESAASFDELLSVIKNCVTTSPILVHCSAGIGRTGTLIGAYAALLHIERGILTDSTVYSIV 263
Query: 149 RSLR 152
+++
Sbjct: 264 AAMK 267
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase,
oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora
erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Length = 486
Score = 27.7 bits (62), Expect = 2.9
Identities = 5/24 (20%), Positives = 11/24 (45%)
Query: 54 RTNHPVTCIVNAAPELPDPPLADT 77
+ P++ + +AA L D +
Sbjct: 302 GDDVPLSAVFHAAATLDDGTVDTL 325
>3bvr_A NOTI restriction endonuclease; protein-DNA complex; HET: DNA;
2.50A {Nocardia otitidiscaviarum} PDB: 3bvq_A* 3c25_A*
Length = 383
Score = 27.8 bits (60), Expect = 3.1
Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 3/69 (4%)
Query: 9 ENVKKPWQFFSSTKNHPQISSNSSQLFEVTEVCPGL---LLCGATMVGRTNHPVTCIVNA 65
E +FF +S+ +++ + T CP L L + V C+VN
Sbjct: 10 EGANFIAEFFGHRVYPEVVSTEAARNDQATGTCPFLTAAKLVETSCVKAETSRGVCVVNT 69
Query: 66 APELPDPPL 74
A +
Sbjct: 70 AVDNERYDW 78
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 27.2 bits (61), Expect = 3.3
Identities = 8/27 (29%), Positives = 15/27 (55%)
Query: 104 VQKIKDEGGCTLIHCVAGVSRSASLCL 130
V+ ++ + L+HC AG+ R+ L
Sbjct: 202 VRSLRVDSEPVLVHCSAGIGRTGVLVT 228
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 26.8 bits (60), Expect = 4.7
Identities = 14/71 (19%), Positives = 28/71 (39%), Gaps = 9/71 (12%)
Query: 92 PLDSYFDQVADLVQKIK----DEGGCTLIHCVAGVSRSASLC-----LAYLIKYNQMNFH 142
P + + + V ++ G +IHC AGV R+ + L ++ + ++
Sbjct: 193 PTANAAESILQFVHMVRQQATKSKGPMIIHCSAGVGRTGTFIALDRLLQHIRDHEFVDIL 252
Query: 143 QAFHYLRSLRP 153
+RS R
Sbjct: 253 GLVSEMRSYRM 263
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 26.9 bits (60), Expect = 4.9
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 105 QKIKDEGGCTLIHCVAGVSRSASLCL 130
+ + G +IHC AG+ RS + L
Sbjct: 203 GSLNPDHGPAVIHCSAGIGRSGTFSL 228
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 26.9 bits (60), Expect = 5.6
Identities = 10/38 (26%), Positives = 17/38 (44%), Gaps = 2/38 (5%)
Query: 95 SYFDQVADLVQKIKD--EGGCTLIHCVAGVSRSASLCL 130
S D + + ++ G + HC AG+ RS +L
Sbjct: 221 SQPDDLLTFISYMRHIHRSGPIITHCSAGIGRSGTLIC 258
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural
protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Length = 308
Score = 26.6 bits (58), Expect = 6.5
Identities = 6/43 (13%), Positives = 15/43 (34%), Gaps = 1/43 (2%)
Query: 161 FFKQLINYEKRFYAESSVEIVYNAAAQTYIPSVYEEDYSNMLT 203
+ + + +E +S+ V + YE + +L
Sbjct: 243 IWARFLAFESNIGDLASILKVEKRRFTAF-REEYEGKETALLV 284
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 26.5 bits (59), Expect = 6.9
Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 6/42 (14%)
Query: 95 SYFDQVADLVQKIKD------EGGCTLIHCVAGVSRSASLCL 130
+ + K+++ E G ++HC AG+ RS + CL
Sbjct: 192 ESPASFLNFLFKVRESGSLSPEHGPVVVHCSAGIGRSGTFCL 233
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics,
PSI-2, protein structure initiative, MI center for
structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A
{Vibrio fischeri} PDB: 3pvz_A*
Length = 399
Score = 26.6 bits (59), Expect = 7.3
Identities = 8/34 (23%), Positives = 15/34 (44%), Gaps = 2/34 (5%)
Query: 167 NYEKRFYAESSVEIVYNAAAQTYIPSVYEEDYSN 200
Y+ A+ + V N +A ++ S E+D
Sbjct: 102 EYDAFIKADGQYDYVLNLSALKHVRS--EKDPFT 133
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 26.1 bits (58), Expect = 7.5
Identities = 8/43 (18%), Positives = 15/43 (34%)
Query: 88 SATEPLDSYFDQVADLVQKIKDEGGCTLIHCVAGVSRSASLCL 130
PL +V + Q+ ++H AG+ R+
Sbjct: 208 DRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSAGIGRTGCFIA 250
>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein
structure initiative, nysgrc, P biology; HET: MSE NAD;
2.01A {Sinorhizobium meliloti} PDB: 4dal_A*
Length = 498
Score = 26.3 bits (59), Expect = 8.0
Identities = 12/48 (25%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 74 LADTIKTVKI-HILDSATE--PLDSY--FDQVADLVQKIKDEGGCTLI 116
L + T++ D+ E PL S D+VA V++ D+ +
Sbjct: 323 LTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEIT 370
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 26.0 bits (58), Expect = 8.8
Identities = 7/41 (17%), Positives = 16/41 (39%), Gaps = 5/41 (12%)
Query: 95 SYFDQVADLVQKIK-----DEGGCTLIHCVAGVSRSASLCL 130
S + +++ ++ +HC AG R+ + C
Sbjct: 155 SDGKGMINIIAAVQKQQQQSGNHPITVHCSAGAGRTGTFCA 195
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.320 0.134 0.405
Gapped
Lambda K H
0.267 0.0812 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 2,988,703
Number of extensions: 159811
Number of successful extensions: 545
Number of sequences better than 10.0: 1
Number of HSP's gapped: 501
Number of HSP's successfully gapped: 77
Length of query: 205
Length of database: 6,701,793
Length adjustment: 89
Effective length of query: 116
Effective length of database: 4,216,824
Effective search space: 489151584
Effective search space used: 489151584
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (24.8 bits)