Query psy14075
Match_columns 414
No_of_seqs 419 out of 1163
Neff 10.6
Searched_HMMs 46136
Date Fri Aug 16 18:55:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14075.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14075hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG2814 AraJ Arabinose efflux 100.0 3.7E-42 8.1E-47 309.5 36.5 354 17-376 35-391 (394)
2 PRK03545 putative arabinose tr 100.0 4.5E-41 9.8E-46 316.4 38.2 350 17-372 31-381 (390)
3 PRK09705 cynX putative cyanate 100.0 8.3E-40 1.8E-44 307.5 36.4 354 14-374 28-384 (393)
4 COG2271 UhpC Sugar phosphate p 100.0 3.9E-41 8.4E-46 298.6 25.4 358 15-376 49-439 (448)
5 PRK09556 uhpT sugar phosphate 100.0 1E-39 2.2E-44 313.9 29.8 358 4-371 44-449 (467)
6 PRK10213 nepI ribonucleoside t 100.0 1E-37 2.2E-42 293.2 38.9 342 17-364 42-384 (394)
7 TIGR00903 2A0129 major facilit 100.0 5.7E-38 1.2E-42 290.8 36.7 341 16-368 12-362 (368)
8 PRK10091 MFS transport protein 100.0 7.6E-38 1.7E-42 293.5 36.2 352 16-372 24-377 (382)
9 PRK11663 regulatory protein Uh 100.0 8E-38 1.7E-42 298.0 34.9 353 15-372 43-425 (434)
10 PRK14995 methyl viologen resis 100.0 1.5E-37 3.4E-42 300.5 36.7 328 15-345 26-412 (495)
11 TIGR00890 2A0111 Oxalate/Forma 100.0 1.1E-37 2.4E-42 292.1 32.5 344 15-364 23-375 (377)
12 TIGR00893 2A0114 d-galactonate 100.0 3.2E-37 7E-42 290.8 33.4 349 15-368 14-396 (399)
13 TIGR02332 HpaX 4-hydroxyphenyl 100.0 8.2E-38 1.8E-42 295.6 29.3 339 17-360 30-410 (412)
14 PRK03699 putative transporter; 100.0 6E-37 1.3E-41 288.6 34.9 353 16-373 28-382 (394)
15 KOG3764|consensus 100.0 4.4E-38 9.5E-43 275.7 24.2 351 22-372 98-455 (464)
16 PRK11551 putative 3-hydroxyphe 100.0 1.3E-36 2.8E-41 287.9 35.0 350 16-370 36-395 (406)
17 PRK05122 major facilitator sup 100.0 2.9E-36 6.3E-41 284.9 35.6 345 18-373 38-391 (399)
18 PLN00028 nitrate transmembrane 100.0 1.1E-36 2.5E-41 292.6 33.3 352 17-375 58-437 (476)
19 PRK15402 multidrug efflux syst 100.0 6.1E-36 1.3E-40 283.2 37.6 345 16-365 34-389 (406)
20 TIGR00900 2A0121 H+ Antiporter 100.0 1.7E-36 3.7E-41 282.8 33.2 329 16-348 20-365 (365)
21 PRK10642 proline/glycine betai 100.0 4.3E-36 9.3E-41 290.2 36.4 354 17-375 38-434 (490)
22 PRK10489 enterobactin exporter 100.0 2.9E-36 6.3E-41 286.3 34.1 350 17-371 39-399 (417)
23 TIGR00899 2A0120 sugar efflux 100.0 1.3E-35 2.8E-40 278.2 37.4 345 21-370 24-373 (375)
24 PRK11273 glpT sn-glycerol-3-ph 100.0 5.6E-36 1.2E-40 286.8 35.6 357 17-378 51-442 (452)
25 TIGR00892 2A0113 monocarboxyla 100.0 7.9E-37 1.7E-41 292.3 29.2 347 15-367 39-417 (455)
26 PRK10504 putative transporter; 100.0 1.3E-35 2.9E-40 286.3 37.2 331 16-350 31-419 (471)
27 PRK12307 putative sialic acid 100.0 5.7E-36 1.2E-40 285.4 33.7 336 17-358 40-395 (426)
28 PRK10473 multidrug efflux syst 100.0 4.2E-35 9.2E-40 276.2 38.2 338 16-362 24-365 (392)
29 PRK03633 putative MFS family t 100.0 2.2E-35 4.7E-40 276.9 34.5 343 16-368 27-369 (381)
30 PRK12382 putative transporter; 100.0 3.6E-35 7.7E-40 276.7 35.3 340 21-371 42-389 (392)
31 TIGR00897 2A0118 polyol permea 100.0 7.5E-35 1.6E-39 275.0 37.0 347 18-371 36-401 (402)
32 TIGR00711 efflux_EmrB drug res 100.0 2.2E-35 4.8E-40 286.1 34.3 328 16-347 23-411 (485)
33 PRK15403 multidrug efflux syst 100.0 5.6E-35 1.2E-39 276.2 35.9 342 15-362 36-388 (413)
34 TIGR00894 2A0114euk Na(+)-depe 100.0 8.8E-36 1.9E-40 286.9 30.4 342 24-370 70-449 (465)
35 PRK10406 alpha-ketoglutarate t 100.0 4.5E-35 9.8E-40 279.0 34.8 349 17-371 44-424 (432)
36 PRK03893 putative sialic acid 100.0 3.3E-35 7E-40 285.6 34.0 345 17-366 42-448 (496)
37 TIGR00710 efflux_Bcr_CflA drug 100.0 1.6E-34 3.4E-39 271.8 37.4 333 16-353 26-368 (385)
38 PRK11646 multidrug resistance 100.0 8.7E-35 1.9E-39 273.9 35.3 343 20-368 36-385 (400)
39 TIGR00891 2A0112 putative sial 100.0 5E-35 1.1E-39 276.9 31.8 335 17-356 34-401 (405)
40 PRK09874 drug efflux system pr 100.0 1.3E-34 2.8E-39 274.5 34.2 350 17-371 36-398 (408)
41 PRK11195 lysophospholipid tran 100.0 1.8E-34 3.9E-39 271.1 33.2 345 17-372 25-381 (393)
42 PRK15011 sugar efflux transpor 100.0 1.1E-33 2.4E-38 266.2 38.7 346 20-371 41-391 (393)
43 TIGR01299 synapt_SV2 synaptic 100.0 3.4E-34 7.4E-39 282.5 36.0 350 17-372 189-735 (742)
44 PRK11043 putative transporter; 100.0 9.6E-34 2.1E-38 267.8 36.2 333 17-355 28-366 (401)
45 PRK11102 bicyclomycin/multidru 100.0 2.3E-33 4.9E-38 263.2 38.3 348 16-370 12-371 (377)
46 PRK15034 nitrate/nitrite trans 100.0 5.8E-34 1.3E-38 265.8 33.8 347 19-373 58-456 (462)
47 PRK15075 citrate-proton sympor 100.0 2.8E-34 6E-39 273.8 31.8 330 16-350 36-398 (434)
48 cd06174 MFS The Major Facilita 100.0 5.6E-34 1.2E-38 264.3 33.0 330 16-369 20-350 (352)
49 PRK10133 L-fucose transporter; 100.0 1.3E-33 2.7E-38 268.3 35.3 343 17-366 48-428 (438)
50 PRK09952 shikimate transporter 100.0 2.4E-33 5.2E-38 267.2 37.3 346 21-372 49-434 (438)
51 TIGR00881 2A0104 phosphoglycer 100.0 4.9E-35 1.1E-39 274.4 25.0 335 15-353 15-379 (379)
52 TIGR00896 CynX cyanate transpo 100.0 1E-33 2.2E-38 263.2 33.6 326 15-348 20-350 (355)
53 KOG2532|consensus 100.0 1.9E-34 4.1E-39 270.9 28.5 345 22-371 65-447 (466)
54 PRK10054 putative transporter; 100.0 1.1E-33 2.4E-38 265.9 33.0 343 19-367 32-380 (395)
55 TIGR00902 2A0127 phenyl propri 100.0 2.8E-33 6.2E-38 262.5 35.5 338 17-366 26-374 (382)
56 PF07690 MFS_1: Major Facilita 100.0 8.6E-35 1.9E-39 270.1 24.9 317 17-337 18-352 (352)
57 COG2223 NarK Nitrate/nitrite t 100.0 2.7E-34 5.9E-39 255.7 26.3 348 19-373 38-403 (417)
58 PRK10077 xylE D-xylose transpo 100.0 9.2E-34 2E-38 274.3 32.3 343 25-372 50-458 (479)
59 TIGR00712 glpT glycerol-3-phos 100.0 1.1E-33 2.4E-38 269.9 31.3 351 18-373 50-435 (438)
60 PF05977 MFS_3: Transmembrane 100.0 1.8E-32 3.9E-37 262.0 37.2 351 17-371 32-394 (524)
61 TIGR00898 2A0119 cation transp 100.0 2.8E-33 6.1E-38 272.5 31.9 343 17-373 111-497 (505)
62 TIGR00879 SP MFS transporter, 100.0 2.2E-33 4.8E-38 271.4 28.7 351 17-372 50-471 (481)
63 PRK11652 emrD multidrug resist 100.0 4.9E-32 1.1E-36 255.5 36.9 330 16-350 29-364 (394)
64 PRK11010 ampG muropeptide tran 100.0 6.2E-32 1.3E-36 260.3 38.1 349 17-372 34-404 (491)
65 TIGR00885 fucP L-fucose:H+ sym 100.0 2.8E-32 6.1E-37 256.9 34.0 340 16-362 24-403 (410)
66 PRK11128 putative 3-phenylprop 100.0 2.8E-32 6.2E-37 255.8 33.9 336 17-364 26-372 (382)
67 PRK11902 ampG muropeptide tran 100.0 5.3E-31 1.2E-35 248.9 37.2 348 17-372 21-391 (402)
68 TIGR00887 2A0109 phosphate:H+ 100.0 9.8E-32 2.1E-36 260.8 33.0 342 26-372 52-490 (502)
69 PRK09528 lacY galactoside perm 100.0 6.3E-32 1.4E-36 256.8 30.5 345 21-372 37-404 (420)
70 TIGR00883 2A0106 metabolite-pr 100.0 1.2E-31 2.5E-36 252.8 31.7 339 19-361 17-391 (394)
71 KOG2504|consensus 100.0 1.9E-32 4.1E-37 260.6 26.0 351 15-371 66-476 (509)
72 KOG1330|consensus 100.0 2.1E-33 4.6E-38 251.7 17.5 331 17-350 55-417 (493)
73 COG2807 CynX Cyanate permease 100.0 5.1E-31 1.1E-35 229.6 31.7 351 14-371 31-385 (395)
74 TIGR00895 2A0115 benzoate tran 100.0 5.5E-32 1.2E-36 255.4 27.8 322 17-343 39-397 (398)
75 TIGR00889 2A0110 nucleoside tr 100.0 6.8E-31 1.5E-35 248.5 33.1 343 19-374 27-405 (418)
76 TIGR00886 2A0108 nitrite extru 100.0 1.5E-31 3.2E-36 249.8 27.3 310 17-332 23-365 (366)
77 TIGR00882 2A0105 oligosacchari 100.0 1.2E-30 2.6E-35 246.1 32.4 341 21-368 29-392 (396)
78 TIGR00792 gph sugar (Glycoside 100.0 1.5E-30 3.3E-35 248.9 30.8 331 18-349 23-383 (437)
79 TIGR00901 2A0125 AmpG-related 100.0 6.2E-30 1.3E-34 237.9 30.8 309 15-330 8-355 (356)
80 PRK06814 acylglycerophosphoeth 100.0 2.1E-30 4.6E-35 275.1 31.3 331 30-364 52-415 (1140)
81 KOG2533|consensus 100.0 4.3E-31 9.2E-36 248.7 21.8 332 21-356 72-441 (495)
82 COG0738 FucP Fucose permease [ 100.0 6E-29 1.3E-33 220.1 31.8 342 16-364 34-402 (422)
83 PRK08633 2-acyl-glycerophospho 100.0 4E-29 8.7E-34 266.2 35.4 340 19-362 34-401 (1146)
84 PF06609 TRI12: Fungal trichot 100.0 6.7E-28 1.5E-32 229.6 33.8 354 18-377 67-560 (599)
85 TIGR00924 yjdL_sub1_fam amino 100.0 9.2E-28 2E-32 230.2 32.6 350 18-371 33-468 (475)
86 TIGR02718 sider_RhtX_FptX side 100.0 2.9E-27 6.3E-32 222.6 35.4 346 16-366 22-386 (390)
87 PRK10207 dipeptide/tripeptide 100.0 2.7E-27 5.9E-32 227.0 32.0 350 19-372 39-477 (489)
88 KOG0569|consensus 100.0 1.9E-26 4.1E-31 214.4 34.1 342 31-377 61-461 (485)
89 TIGR00806 rfc RFC reduced fola 100.0 8.5E-27 1.9E-31 213.6 29.8 317 16-338 47-407 (511)
90 TIGR00805 oat sodium-independe 100.0 2.6E-27 5.6E-32 233.3 24.9 256 16-272 54-413 (633)
91 PRK09669 putative symporter Ya 100.0 7.7E-26 1.7E-30 216.4 31.5 331 18-349 33-391 (444)
92 PRK09584 tppB putative tripept 100.0 3.7E-25 8E-30 213.5 33.4 349 19-371 46-479 (500)
93 KOG2615|consensus 100.0 3.4E-26 7.3E-31 200.1 22.2 315 27-346 65-414 (451)
94 PRK10429 melibiose:sodium symp 99.9 2.9E-25 6.4E-30 213.7 30.0 330 19-349 31-396 (473)
95 PTZ00207 hypothetical protein; 99.9 9.9E-25 2.1E-29 209.5 31.7 351 17-376 49-557 (591)
96 PRK09848 glucuronide transport 99.9 9.4E-25 2E-29 209.2 30.6 331 19-349 33-391 (448)
97 PF03825 Nuc_H_symport: Nucleo 99.9 4.2E-24 9.2E-29 198.8 33.4 349 18-372 25-396 (400)
98 KOG0254|consensus 99.9 1.2E-24 2.7E-29 211.3 29.9 342 30-377 89-490 (513)
99 KOG0252|consensus 99.9 9.8E-27 2.1E-31 208.2 13.7 352 27-380 81-507 (538)
100 PF01306 LacY_symp: LacY proto 99.9 1.8E-24 4E-29 197.4 28.5 349 21-376 34-405 (412)
101 PF13347 MFS_2: MFS/sugar tran 99.9 6.1E-25 1.3E-29 209.2 25.9 331 18-349 25-387 (428)
102 KOG0255|consensus 99.9 6.5E-24 1.4E-28 207.3 31.8 342 23-377 111-499 (521)
103 TIGR00788 fbt folate/biopterin 99.9 1.1E-24 2.5E-29 208.3 25.9 341 17-365 48-437 (468)
104 PF11700 ATG22: Vacuole efflux 99.9 7.4E-23 1.6E-27 194.0 37.1 342 30-375 70-472 (477)
105 PRK11462 putative transporter; 99.9 3.5E-23 7.5E-28 198.0 34.6 330 19-349 34-390 (460)
106 TIGR01301 GPH_sucrose GPH fami 99.9 4.8E-23 1E-27 194.0 34.6 352 18-373 27-473 (477)
107 KOG0253|consensus 99.9 2.2E-24 4.8E-29 187.6 22.3 351 18-376 101-524 (528)
108 COG2211 MelB Na+/melibiose sym 99.9 1.7E-23 3.7E-28 192.9 29.4 330 20-349 38-399 (467)
109 TIGR01272 gluP glucose/galacto 99.9 1.5E-23 3.4E-28 189.8 28.4 275 78-359 5-303 (310)
110 KOG4686|consensus 99.9 4.4E-25 9.6E-30 185.3 13.9 350 19-374 68-446 (459)
111 PF00083 Sugar_tr: Sugar (and 99.9 1.3E-28 2.7E-33 236.6 -20.1 342 28-376 44-442 (451)
112 PRK15462 dipeptide/tripeptide 99.9 3E-20 6.4E-25 175.9 32.3 338 22-363 37-469 (493)
113 COG2270 Permeases of the major 99.9 3.2E-20 6.8E-25 166.1 26.1 340 30-373 58-431 (438)
114 PF03209 PUCC: PUCC protein; 99.9 1.4E-18 3.1E-23 156.1 33.5 345 21-370 6-397 (403)
115 KOG2563|consensus 99.8 9E-18 2E-22 151.2 20.7 353 22-380 72-459 (480)
116 COG3104 PTR2 Dipeptide/tripept 99.8 1E-16 2.2E-21 146.9 24.9 344 25-371 56-487 (498)
117 KOG2816|consensus 99.7 2.8E-16 6.1E-21 147.7 22.4 299 39-347 71-393 (463)
118 PF03092 BT1: BT1 family; Int 99.7 1.3E-15 2.8E-20 144.1 25.6 353 17-373 12-415 (433)
119 KOG3626|consensus 99.7 4E-16 8.8E-21 150.4 21.3 252 17-269 119-472 (735)
120 PRK10054 putative transporter; 99.7 9.7E-16 2.1E-20 144.3 18.5 175 191-369 6-180 (395)
121 KOG2325|consensus 99.7 1.7E-15 3.7E-20 140.5 19.2 345 24-370 65-474 (488)
122 COG2271 UhpC Sugar phosphate p 99.7 4.6E-16 9.9E-21 139.4 14.4 171 200-374 37-209 (448)
123 TIGR00880 2_A_01_02 Multidrug 99.7 3.3E-16 7.2E-21 124.8 11.9 138 35-173 3-140 (141)
124 PRK11663 regulatory protein Uh 99.7 1.6E-15 3.6E-20 144.7 18.6 168 196-367 27-194 (434)
125 TIGR00924 yjdL_sub1_fam amino 99.7 1.7E-15 3.6E-20 145.7 18.4 183 189-371 6-192 (475)
126 PF03137 OATP: Organic Anion T 99.7 3.4E-18 7.3E-23 164.6 -0.3 329 17-346 25-514 (539)
127 PF05631 DUF791: Protein of un 99.7 7.4E-14 1.6E-18 123.9 24.6 235 22-261 61-312 (354)
128 COG2814 AraJ Arabinose efflux 99.7 1.7E-14 3.6E-19 131.0 20.8 177 192-372 13-189 (394)
129 TIGR00900 2A0121 H+ Antiporter 99.7 4.3E-15 9.4E-20 138.4 17.5 171 197-371 4-179 (365)
130 PF07690 MFS_1: Major Facilita 99.6 6.4E-15 1.4E-19 136.6 17.7 169 199-370 3-171 (352)
131 PRK11646 multidrug resistance 99.6 1.7E-14 3.7E-19 136.1 20.3 171 195-369 13-183 (400)
132 TIGR00710 efflux_Bcr_CflA drug 99.6 1.4E-14 3E-19 136.3 18.1 171 196-370 9-179 (385)
133 TIGR00889 2A0110 nucleoside tr 99.6 1.2E-14 2.5E-19 137.8 17.4 162 19-181 232-412 (418)
134 PRK10213 nepI ribonucleoside t 99.6 4.4E-14 9.5E-19 133.0 21.2 153 210-366 38-190 (394)
135 PRK03545 putative arabinose tr 99.6 3.1E-14 6.7E-19 134.2 19.9 172 194-369 11-182 (390)
136 PRK09584 tppB putative tripept 99.6 2.5E-14 5.4E-19 138.4 19.6 181 186-369 14-199 (500)
137 TIGR00895 2A0115 benzoate tran 99.6 5.2E-15 1.1E-19 139.6 14.5 163 202-368 27-189 (398)
138 PRK15462 dipeptide/tripeptide 99.6 2.4E-14 5.2E-19 135.9 18.9 178 191-371 8-189 (493)
139 TIGR00891 2A0112 putative sial 99.6 4.8E-14 1E-18 133.5 20.1 169 194-366 14-184 (405)
140 PRK10504 putative transporter; 99.6 4.1E-14 8.8E-19 136.8 19.8 176 192-371 10-185 (471)
141 TIGR02332 HpaX 4-hydroxyphenyl 99.6 2.9E-14 6.3E-19 135.1 18.3 171 196-370 12-188 (412)
142 PRK10489 enterobactin exporter 99.6 6.4E-15 1.4E-19 140.1 13.3 185 184-372 9-198 (417)
143 PRK10091 MFS transport protein 99.6 4.8E-14 1E-18 132.4 19.0 173 192-368 3-175 (382)
144 TIGR00893 2A0114 d-galactonate 99.6 1E-14 2.2E-19 137.4 14.4 159 209-371 11-169 (399)
145 PRK05122 major facilitator sup 99.6 6E-14 1.3E-18 132.6 18.8 170 189-361 12-189 (399)
146 PRK09874 drug efflux system pr 99.6 1.2E-13 2.6E-18 131.0 20.7 176 191-371 13-193 (408)
147 TIGR00886 2A0108 nitrite extru 99.6 8E-14 1.7E-18 130.1 19.1 167 193-363 2-180 (366)
148 PRK12382 putative transporter; 99.6 1.2E-13 2.6E-18 130.3 20.1 167 190-359 13-187 (392)
149 PRK14995 methyl viologen resis 99.6 1.1E-13 2.5E-18 134.2 20.3 173 195-371 9-182 (495)
150 TIGR00881 2A0104 phosphoglycer 99.6 9.3E-15 2E-19 136.9 12.3 167 202-372 5-172 (379)
151 PRK10207 dipeptide/tripeptide 99.6 6.8E-14 1.5E-18 134.7 18.3 177 192-371 14-194 (489)
152 PRK03699 putative transporter; 99.6 2.3E-13 5E-18 128.3 21.1 171 194-368 9-180 (394)
153 PRK10473 multidrug efflux syst 99.6 1.1E-13 2.4E-18 130.5 18.9 175 192-370 3-177 (392)
154 PRK11043 putative transporter; 99.6 1.5E-13 3.4E-18 129.9 19.8 161 209-372 20-182 (401)
155 PRK11551 putative 3-hydroxyphe 99.6 1.3E-13 2.8E-18 130.7 19.3 167 199-369 22-188 (406)
156 TIGR00711 efflux_EmrB drug res 99.6 6.7E-14 1.4E-18 135.9 17.3 173 195-371 5-177 (485)
157 PRK09528 lacY galactoside perm 99.6 1.3E-13 2.8E-18 131.3 18.8 185 187-373 5-193 (420)
158 PRK12307 putative sialic acid 99.6 2.2E-13 4.8E-18 129.9 19.9 162 194-359 20-181 (426)
159 PRK11102 bicyclomycin/multidru 99.6 1.4E-13 2.9E-18 129.2 17.3 160 207-370 6-165 (377)
160 TIGR00903 2A0129 major facilit 99.6 2.1E-13 4.6E-18 126.8 18.0 160 206-370 5-164 (368)
161 PLN00028 nitrate transmembrane 99.6 5.4E-13 1.2E-17 128.7 21.4 166 202-372 46-220 (476)
162 TIGR00890 2A0111 Oxalate/Forma 99.6 1.5E-13 3.2E-18 128.7 17.0 159 208-371 19-177 (377)
163 PRK15402 multidrug efflux syst 99.6 2.4E-13 5.2E-18 128.9 18.5 159 207-369 28-186 (406)
164 PRK11273 glpT sn-glycerol-3-ph 99.5 4E-13 8.7E-18 129.0 19.6 154 212-370 49-207 (452)
165 TIGR00712 glpT glycerol-3-phos 99.5 3.1E-13 6.7E-18 129.3 18.6 157 210-371 45-206 (438)
166 PRK03893 putative sialic acid 99.5 6.4E-13 1.4E-17 129.4 21.0 162 194-359 22-183 (496)
167 PRK11195 lysophospholipid tran 99.5 4.8E-13 1E-17 125.9 18.6 173 191-371 2-174 (393)
168 PRK15403 multidrug efflux syst 99.5 4.6E-13 1E-17 126.9 18.5 160 206-369 30-189 (413)
169 PRK11652 emrD multidrug resist 99.5 7.4E-13 1.6E-17 125.0 19.9 167 197-367 13-179 (394)
170 TIGR00899 2A0120 sugar efflux 99.5 4E-13 8.8E-18 125.8 17.7 168 199-369 4-174 (375)
171 PRK03633 putative MFS family t 99.5 8.4E-13 1.8E-17 124.0 19.1 153 191-347 5-157 (381)
172 TIGR00897 2A0118 polyol permea 99.5 9.1E-13 2E-17 124.6 19.0 174 192-369 13-191 (402)
173 TIGR01299 synapt_SV2 synaptic 99.5 1.2E-12 2.7E-17 130.3 20.5 160 211-374 186-358 (742)
174 PRK09705 cynX putative cyanate 99.5 1.4E-12 3.1E-17 122.9 20.1 152 209-365 26-178 (393)
175 TIGR00892 2A0113 monocarboxyla 99.5 1.1E-12 2.4E-17 125.8 19.5 157 211-372 38-195 (455)
176 TIGR00882 2A0105 oligosacchari 99.5 1.1E-12 2.4E-17 123.8 19.1 175 191-371 1-183 (396)
177 PRK15011 sugar efflux transpor 99.5 3.3E-12 7.1E-17 120.5 21.4 177 191-371 14-194 (393)
178 TIGR00885 fucP L-fucose:H+ sym 99.5 2.7E-12 5.9E-17 121.3 20.3 171 194-368 5-204 (410)
179 TIGR00806 rfc RFC reduced fola 99.5 5.1E-12 1.1E-16 117.0 21.1 158 213-375 46-207 (511)
180 PRK09556 uhpT sugar phosphate 99.5 6.9E-13 1.5E-17 127.9 16.0 156 211-370 48-211 (467)
181 KOG3762|consensus 99.5 7.3E-13 1.6E-17 122.1 14.9 186 187-376 366-552 (618)
182 cd06174 MFS The Major Facilita 99.5 5.2E-13 1.1E-17 123.6 14.4 150 18-168 198-349 (352)
183 PRK15034 nitrate/nitrite trans 99.5 2.6E-12 5.7E-17 120.8 18.0 177 192-372 34-233 (462)
184 KOG1330|consensus 99.5 4.8E-14 1E-18 127.8 5.8 180 194-377 35-215 (493)
185 TIGR00902 2A0127 phenyl propri 99.5 1.6E-12 3.5E-17 122.1 16.1 145 19-166 229-374 (382)
186 TIGR00887 2A0109 phosphate:H+ 99.5 6.7E-12 1.5E-16 122.2 20.0 148 225-375 53-229 (502)
187 TIGR00879 SP MFS transporter, 99.4 1.1E-12 2.3E-17 126.9 13.9 143 227-372 70-218 (481)
188 PRK10133 L-fucose transporter; 99.4 1.5E-11 3.3E-16 117.3 21.0 147 194-344 28-177 (438)
189 PF01770 Folate_carrier: Reduc 99.4 8.9E-10 1.9E-14 100.9 30.2 310 19-333 28-389 (412)
190 PF05977 MFS_3: Transmembrane 99.4 1.1E-11 2.5E-16 119.3 18.8 182 187-372 5-191 (524)
191 COG3104 PTR2 Dipeptide/tripept 99.4 3.5E-12 7.6E-17 117.5 14.0 192 185-377 13-212 (498)
192 PRK10642 proline/glycine betai 99.4 1.1E-11 2.5E-16 120.2 17.9 155 19-175 274-433 (490)
193 PRK11010 ampG muropeptide tran 99.4 4.7E-11 1E-15 115.6 22.1 153 19-172 247-404 (491)
194 PRK09952 shikimate transporter 99.4 4.3E-11 9.3E-16 114.4 21.4 164 195-362 25-211 (438)
195 TIGR00880 2_A_01_02 Multidrug 99.4 8E-12 1.7E-16 99.3 13.4 136 233-371 3-138 (141)
196 PRK10077 xylE D-xylose transpo 99.4 9.6E-12 2.1E-16 120.6 16.5 148 224-374 51-218 (479)
197 PRK10406 alpha-ketoglutarate t 99.4 5E-11 1.1E-15 113.9 20.4 160 200-363 30-211 (432)
198 KOG3764|consensus 99.4 2.9E-12 6.4E-17 114.0 10.5 152 223-377 101-253 (464)
199 TIGR00894 2A0114euk Na(+)-depe 99.4 3.8E-12 8.2E-17 122.9 12.2 148 222-372 70-220 (465)
200 PRK11128 putative 3-phenylprop 99.4 3.3E-11 7.1E-16 113.2 17.7 156 201-364 13-172 (382)
201 PRK11902 ampG muropeptide tran 99.4 3.3E-11 7.2E-16 114.0 17.6 166 200-371 7-182 (402)
202 PTZ00207 hypothetical protein; 99.3 2E-10 4.3E-15 111.3 20.6 158 210-374 45-208 (591)
203 TIGR00896 CynX cyanate transpo 99.3 7.7E-11 1.7E-15 109.6 17.3 148 209-362 17-166 (355)
204 TIGR00898 2A0119 cation transp 99.3 9.2E-12 2E-16 121.6 11.2 148 220-373 116-266 (505)
205 COG2223 NarK Nitrate/nitrite t 99.3 6.9E-11 1.5E-15 106.6 15.0 177 192-374 14-196 (417)
206 TIGR00805 oat sodium-independe 99.3 1.7E-11 3.6E-16 121.6 12.1 159 211-373 52-283 (633)
207 PRK06814 acylglycerophosphoeth 99.3 1.3E-10 2.8E-15 124.4 19.7 184 186-372 5-196 (1140)
208 PRK15075 citrate-proton sympor 99.3 2.2E-10 4.8E-15 109.5 19.3 161 194-358 17-199 (434)
209 TIGR00883 2A0106 metabolite-pr 99.3 3.3E-11 7.1E-16 113.5 12.5 142 19-161 243-391 (394)
210 KOG3098|consensus 99.3 4.7E-09 1E-13 97.8 26.1 300 36-341 56-409 (461)
211 PF01306 LacY_symp: LacY proto 99.3 5.9E-11 1.3E-15 109.2 13.1 181 189-371 4-188 (412)
212 PF11700 ATG22: Vacuole efflux 99.3 1.6E-10 3.5E-15 110.1 16.6 151 22-173 309-470 (477)
213 TIGR01301 GPH_sucrose GPH fami 99.3 3.2E-10 7E-15 107.5 18.4 177 193-373 5-220 (477)
214 TIGR00901 2A0125 AmpG-related 99.2 1.7E-10 3.7E-15 107.3 15.2 155 211-371 7-178 (356)
215 TIGR00769 AAA ADP/ATP carrier 99.2 1.1E-07 2.4E-12 89.9 33.6 249 18-268 26-343 (472)
216 TIGR02718 sider_RhtX_FptX side 99.2 1.9E-10 4.1E-15 108.4 15.3 148 19-166 232-386 (390)
217 KOG2615|consensus 99.2 1E-10 2.2E-15 103.7 12.1 117 225-345 65-181 (451)
218 PF06609 TRI12: Fungal trichot 99.2 5.6E-10 1.2E-14 107.6 18.2 184 187-376 35-222 (599)
219 PRK08633 2-acyl-glycerophospho 99.2 5.3E-10 1.1E-14 120.1 20.1 157 187-346 4-165 (1146)
220 PF06813 Nodulin-like: Nodulin 99.2 7.8E-10 1.7E-14 95.4 16.1 152 18-173 25-184 (250)
221 PF06963 FPN1: Ferroportin1 (F 99.2 9.5E-08 2.1E-12 89.3 31.1 303 32-337 40-409 (432)
222 KOG2532|consensus 99.2 1.2E-10 2.6E-15 110.3 11.8 150 221-373 66-218 (466)
223 COG0738 FucP Fucose permease [ 99.2 4.4E-09 9.5E-14 94.6 19.5 167 201-371 22-210 (422)
224 COG2270 Permeases of the major 99.1 4.4E-10 9.4E-15 101.6 11.9 150 23-173 281-431 (438)
225 TIGR00792 gph sugar (Glycoside 99.1 7.8E-10 1.7E-14 105.9 13.1 123 28-150 255-384 (437)
226 KOG0637|consensus 99.1 7.5E-10 1.6E-14 100.7 11.3 327 18-350 55-474 (498)
227 KOG4332|consensus 99.1 8.4E-09 1.8E-13 87.2 16.1 332 23-367 65-427 (454)
228 TIGR01272 gluP glucose/galacto 99.1 3E-09 6.5E-14 96.5 14.1 131 25-159 173-303 (310)
229 COG0477 ProP Permeases of the 99.1 3.8E-07 8.2E-12 82.4 27.9 146 17-163 24-177 (338)
230 PF03825 Nuc_H_symport: Nucleo 99.0 9E-09 2E-13 96.4 15.8 155 19-174 231-398 (400)
231 KOG2504|consensus 99.0 5.2E-09 1.1E-13 100.6 14.1 174 194-372 44-222 (509)
232 TIGR00926 2A1704 Peptide:H+ sy 99.0 3.3E-07 7.2E-12 90.7 25.7 150 20-169 13-180 (654)
233 TIGR00788 fbt folate/biopterin 99.0 3.2E-08 6.9E-13 95.2 18.2 175 194-373 28-211 (468)
234 KOG0254|consensus 99.0 2.8E-08 6E-13 97.1 17.9 141 230-374 91-233 (513)
235 KOG0255|consensus 99.0 4.8E-09 1E-13 102.8 12.5 146 221-372 111-256 (521)
236 PF02487 CLN3: CLN3 protein; 99.0 1.3E-06 2.8E-11 80.4 26.9 304 28-343 57-394 (402)
237 KOG2533|consensus 99.0 7.6E-09 1.6E-13 98.5 12.8 149 221-372 74-228 (495)
238 KOG3574|consensus 99.0 1.9E-07 4.1E-12 83.1 20.3 326 17-348 52-433 (510)
239 KOG0569|consensus 98.9 6.6E-09 1.4E-13 97.8 11.3 143 231-376 63-210 (485)
240 PRK09669 putative symporter Ya 98.9 2.5E-08 5.5E-13 95.7 14.9 165 202-369 19-202 (444)
241 PRK10429 melibiose:sodium symp 98.9 5.1E-08 1.1E-12 94.2 16.2 167 199-368 13-198 (473)
242 PRK09848 glucuronide transport 98.9 2.7E-08 5.8E-13 95.6 12.9 126 24-149 258-391 (448)
243 COG2807 CynX Cyanate permease 98.9 9.6E-08 2.1E-12 84.9 14.7 155 18-173 231-387 (395)
244 PF05631 DUF791: Protein of un 98.8 6.4E-07 1.4E-11 80.2 19.8 149 221-372 62-217 (354)
245 KOG4686|consensus 98.8 5.1E-08 1.1E-12 83.3 12.0 146 20-168 290-440 (459)
246 PF13347 MFS_2: MFS/sugar tran 98.8 2.3E-08 5.1E-13 95.4 11.2 169 202-373 11-200 (428)
247 PRK11462 putative transporter; 98.8 2E-07 4.3E-12 89.7 17.2 169 199-369 16-202 (460)
248 PF06813 Nodulin-like: Nodulin 98.8 2.1E-07 4.5E-12 80.5 14.9 158 209-373 19-184 (250)
249 KOG3762|consensus 98.8 2.6E-08 5.7E-13 92.5 9.1 147 22-169 398-545 (618)
250 PF00083 Sugar_tr: Sugar (and 98.8 5.9E-11 1.3E-15 114.1 -8.8 142 229-373 47-194 (451)
251 KOG0253|consensus 98.7 3.8E-08 8.2E-13 87.2 7.4 134 40-176 391-524 (528)
252 TIGR00926 2A1704 Peptide:H+ sy 98.7 6E-07 1.3E-11 88.9 15.9 165 208-372 3-183 (654)
253 KOG3810|consensus 98.6 1.4E-06 3E-11 76.8 14.4 341 24-372 35-422 (433)
254 KOG2325|consensus 98.6 1.6E-06 3.5E-11 81.3 14.6 179 194-376 36-234 (488)
255 PF01770 Folate_carrier: Reduc 98.6 1.2E-05 2.6E-10 74.2 19.8 164 209-376 20-187 (412)
256 COG2211 MelB Na+/melibiose sym 98.6 3.1E-06 6.8E-11 79.2 16.1 173 196-370 16-206 (467)
257 PF06779 DUF1228: Protein of u 98.5 1.3E-07 2.7E-12 66.2 4.2 72 16-87 13-84 (85)
258 PF03092 BT1: BT1 family; Int 98.4 4.7E-06 1E-10 79.3 13.5 157 215-373 12-177 (433)
259 PF13000 Acatn: Acetyl-coenzym 98.4 0.00024 5.2E-09 66.4 23.4 326 17-346 22-467 (544)
260 KOG0252|consensus 98.4 2.6E-06 5.6E-11 78.2 10.4 113 225-340 81-200 (538)
261 KOG2816|consensus 98.4 2E-05 4.4E-10 74.8 16.5 134 238-377 72-205 (463)
262 PF05978 UNC-93: Ion channel r 98.3 1E-05 2.3E-10 64.5 11.8 107 35-143 42-148 (156)
263 PF03219 TLC: TLC ATP/ADP tran 98.3 0.0018 4E-08 62.0 28.3 235 28-264 56-355 (491)
264 PF03209 PUCC: PUCC protein; 98.2 7.7E-05 1.7E-09 68.2 15.9 148 22-170 236-397 (403)
265 PF12832 MFS_1_like: MFS_1 lik 98.2 6.6E-06 1.4E-10 57.1 6.9 70 197-267 5-74 (77)
266 KOG1237|consensus 98.1 0.0007 1.5E-08 66.3 21.9 150 19-168 62-242 (571)
267 PF12832 MFS_1_like: MFS_1 lik 98.0 1.3E-05 2.8E-10 55.7 5.3 54 17-70 22-75 (77)
268 COG3202 ATP/ADP translocase [E 98.0 0.015 3.2E-07 54.7 28.7 249 21-270 49-364 (509)
269 PF00854 PTR2: POT family; In 98.0 4.5E-05 9.7E-10 71.4 10.1 109 61-169 2-121 (372)
270 PF07672 MFS_Mycoplasma: Mycop 97.9 0.00077 1.7E-08 57.8 15.3 144 116-261 2-175 (267)
271 PF06963 FPN1: Ferroportin1 (F 97.9 0.0018 4E-08 60.9 18.6 178 193-370 3-199 (432)
272 PF03137 OATP: Organic Anion T 97.8 2.3E-06 4.9E-11 83.3 -1.6 157 218-377 28-256 (539)
273 TIGR00939 2a57 Equilibrative N 97.8 0.011 2.4E-07 56.2 22.3 106 231-339 310-427 (437)
274 PRK03612 spermidine synthase; 97.7 0.0075 1.6E-07 58.7 20.7 161 199-363 21-189 (521)
275 PF05978 UNC-93: Ion channel r 97.7 0.0047 1E-07 49.4 15.8 107 233-343 42-148 (156)
276 COG0477 ProP Permeases of the 97.7 0.0042 9E-08 55.7 17.3 151 206-360 16-174 (338)
277 KOG2563|consensus 97.7 0.00098 2.1E-08 61.6 12.7 127 216-347 68-203 (480)
278 PF00854 PTR2: POT family; In 97.6 0.00051 1.1E-08 64.3 10.6 116 259-374 2-126 (372)
279 KOG3626|consensus 97.6 0.00076 1.6E-08 66.6 11.7 175 200-378 105-350 (735)
280 PF02487 CLN3: CLN3 protein; 97.6 0.0013 2.7E-08 61.0 12.1 129 233-370 64-194 (402)
281 PF06779 DUF1228: Protein of u 97.5 0.0008 1.7E-08 47.2 7.5 77 207-284 7-83 (85)
282 TIGR00769 AAA ADP/ATP carrier 97.3 0.034 7.4E-07 53.2 18.4 147 192-345 7-190 (472)
283 KOG0637|consensus 97.0 0.0045 9.8E-08 57.4 9.0 149 192-341 32-200 (498)
284 PRK03612 spermidine synthase; 96.8 0.029 6.3E-07 54.7 13.8 143 22-167 42-193 (521)
285 KOG3880|consensus 96.8 0.015 3.2E-07 51.2 9.8 137 32-174 64-202 (409)
286 KOG1237|consensus 96.4 0.084 1.8E-06 52.0 13.5 172 199-370 44-244 (571)
287 KOG1479|consensus 96.2 1 2.3E-05 41.8 19.9 134 206-343 257-401 (406)
288 KOG3097|consensus 95.7 0.16 3.4E-06 45.4 10.8 227 39-268 67-350 (390)
289 KOG4332|consensus 95.7 0.073 1.6E-06 46.1 8.4 144 217-363 61-212 (454)
290 KOG2601|consensus 95.2 0.2 4.3E-06 45.6 9.8 125 37-162 70-217 (503)
291 KOG3098|consensus 95.0 0.55 1.2E-05 44.7 12.7 101 39-141 288-409 (461)
292 TIGR00939 2a57 Equilibrative N 94.8 1.5 3.2E-05 42.0 15.2 29 284-316 109-137 (437)
293 KOG1479|consensus 94.7 3.4 7.3E-05 38.6 16.7 58 193-252 19-76 (406)
294 KOG2601|consensus 94.2 1.1 2.4E-05 41.0 11.9 167 195-362 30-217 (503)
295 KOG3574|consensus 93.4 1.5 3.3E-05 40.4 11.3 81 192-276 31-117 (510)
296 PF13000 Acatn: Acetyl-coenzym 92.0 1.1 2.5E-05 42.6 9.1 68 196-263 4-75 (544)
297 TIGR03644 marine_trans_1 proba 91.9 11 0.00024 35.5 16.0 24 117-140 123-146 (404)
298 PF03547 Mem_trans: Membrane t 89.5 4.9 0.00011 37.7 11.3 14 242-255 9-22 (385)
299 KOG3810|consensus 89.5 2.3 5E-05 38.7 8.2 136 33-172 274-422 (433)
300 KOG4830|consensus 87.6 0.14 3.1E-06 44.0 -0.4 155 184-339 193-350 (412)
301 KOG3880|consensus 85.6 3.5 7.6E-05 36.9 6.9 75 68-143 327-401 (409)
302 TIGR00836 amt ammonium transpo 85.1 35 0.00075 32.3 14.7 24 117-140 116-139 (403)
303 PF06027 DUF914: Eukaryotic pr 82.4 34 0.00074 31.4 12.2 32 336-367 272-303 (334)
304 PF01733 Nucleoside_tran: Nucl 82.2 0.48 1E-05 43.0 0.4 104 232-339 186-303 (309)
305 PF07857 DUF1632: CEO family ( 80.6 14 0.0003 32.3 8.7 21 354-374 119-139 (254)
306 PRK13629 threonine/serine tran 78.2 65 0.0014 30.8 15.1 44 115-163 19-62 (443)
307 PF05255 UPF0220: Uncharacteri 75.6 16 0.00036 29.5 7.2 135 111-247 14-154 (166)
308 PF06912 DUF1275: Protein of u 75.1 50 0.0011 27.9 14.7 42 116-158 158-199 (209)
309 COG4262 Predicted spermidine s 74.8 71 0.0015 29.5 15.5 141 199-344 14-163 (508)
310 PF02990 EMP70: Endomembrane p 70.5 52 0.0011 32.5 10.7 30 225-254 290-319 (521)
311 COG5336 Uncharacterized protei 70.0 16 0.00034 26.8 5.1 33 316-348 38-70 (116)
312 COG0004 AmtB Ammonia permease 69.5 1E+02 0.0022 29.0 13.5 24 117-140 119-142 (409)
313 PF14851 FAM176: FAM176 family 68.7 17 0.00036 28.9 5.6 17 352-368 24-40 (153)
314 PF03596 Cad: Cadmium resistan 68.6 40 0.00088 28.0 8.1 33 137-169 43-75 (191)
315 COG1457 CodB Purine-cytosine p 67.4 1.2E+02 0.0026 29.1 20.5 148 110-260 12-160 (442)
316 KOG3097|consensus 66.8 1.1E+02 0.0023 28.2 10.9 111 192-310 29-139 (390)
317 COG2962 RarD Predicted permeas 64.3 98 0.0021 27.5 9.9 82 183-273 60-142 (293)
318 PRK10666 ammonium transporter; 63.6 1.4E+02 0.003 28.5 19.3 27 116-142 142-168 (428)
319 PF01914 MarC: MarC family int 62.3 95 0.0021 26.1 10.4 61 310-370 28-89 (203)
320 PF01733 Nucleoside_tran: Nucl 61.4 3.2 6.9E-05 37.7 0.5 107 34-141 186-305 (309)
321 PRK10263 DNA translocase FtsK; 61.3 2.6E+02 0.0057 30.9 14.6 33 331-363 142-174 (1355)
322 PF03741 TerC: Integral membra 59.9 99 0.0021 25.6 16.5 59 98-159 11-69 (183)
323 COG2119 Predicted membrane pro 59.9 97 0.0021 25.5 14.7 34 237-270 143-176 (190)
324 COG4262 Predicted spermidine s 59.0 1.5E+02 0.0033 27.5 11.1 112 26-140 39-159 (508)
325 PF07760 DUF1616: Protein of u 58.4 1.4E+02 0.003 26.8 12.1 61 86-149 22-82 (287)
326 PF02694 UPF0060: Uncharacteri 55.8 33 0.00071 25.2 4.7 54 27-80 51-104 (107)
327 COG2274 SunT ABC-type bacterio 54.7 2E+02 0.0044 29.7 11.8 61 311-371 243-315 (709)
328 COG5336 Uncharacterized protei 54.4 57 0.0012 24.0 5.7 30 33-62 45-75 (116)
329 COG2836 Uncharacterized conser 53.8 1.4E+02 0.0031 25.5 13.7 45 224-268 160-207 (232)
330 TIGR00910 2A0307_GadC glutamat 53.7 1.7E+02 0.0037 28.7 11.0 8 57-64 76-83 (507)
331 PF03606 DcuC: C4-dicarboxylat 53.7 59 0.0013 31.5 7.7 9 250-258 106-114 (465)
332 PRK02237 hypothetical protein; 50.9 57 0.0012 24.1 5.3 51 30-80 56-106 (109)
333 PRK11017 codB cytosine permeas 49.2 2.4E+02 0.0052 26.8 17.5 143 111-257 3-147 (404)
334 PF02632 BioY: BioY family; I 48.9 1.1E+02 0.0023 24.4 7.1 42 36-77 59-100 (148)
335 PRK00293 dipZ thiol:disulfide 48.5 3E+02 0.0064 27.6 18.9 51 226-276 323-380 (571)
336 PF12805 FUSC-like: FUSC-like 47.7 2.1E+02 0.0045 25.6 10.9 19 279-297 21-39 (284)
337 PF03219 TLC: TLC ATP/ADP tran 46.8 2.9E+02 0.0063 27.1 24.9 49 315-363 314-362 (491)
338 PF01102 Glycophorin_A: Glycop 46.3 14 0.0003 28.1 1.7 12 365-376 83-94 (122)
339 KOG4255|consensus 45.1 2.5E+02 0.0054 25.8 14.4 25 197-221 16-40 (439)
340 PF00909 Ammonium_transp: Ammo 44.3 2.8E+02 0.0061 26.2 17.3 29 116-144 107-135 (399)
341 COG1268 BioY Uncharacterized c 44.2 94 0.002 25.7 6.3 24 36-59 88-111 (184)
342 KOG0682|consensus 43.1 3.2E+02 0.007 26.5 11.5 34 116-149 145-178 (500)
343 PF07672 MFS_Mycoplasma: Mycop 42.8 1.7E+02 0.0037 25.8 7.9 101 33-135 144-254 (267)
344 PF02694 UPF0060: Uncharacteri 41.9 43 0.00093 24.6 3.5 49 228-276 54-102 (107)
345 PF04277 OAD_gamma: Oxaloaceta 41.7 70 0.0015 21.9 4.6 24 346-369 9-32 (79)
346 COG4769 Predicted membrane pro 41.6 76 0.0016 25.5 5.1 51 39-95 82-132 (181)
347 PRK10621 hypothetical protein; 41.5 2.5E+02 0.0054 24.7 15.0 30 130-159 84-113 (266)
348 PRK11111 hypothetical protein; 41.0 2.3E+02 0.0049 24.2 10.5 37 333-369 57-94 (214)
349 PF06912 DUF1275: Protein of u 40.3 2.2E+02 0.0048 23.9 17.8 22 328-349 170-191 (209)
350 PF11947 DUF3464: Protein of u 39.9 69 0.0015 25.5 4.7 49 82-134 96-144 (153)
351 PRK10995 inner membrane protei 39.9 2.4E+02 0.0052 24.1 10.2 39 331-369 53-92 (221)
352 PF06679 DUF1180: Protein of u 39.8 47 0.001 26.7 3.9 13 350-362 95-107 (163)
353 COG4736 CcoQ Cbb3-type cytochr 39.2 1.1E+02 0.0024 20.0 4.7 12 365-376 25-36 (60)
354 COG0730 Predicted permeases [G 38.8 2.7E+02 0.0058 24.3 15.3 21 237-257 212-232 (258)
355 PF11299 DUF3100: Protein of u 37.4 46 0.00099 28.4 3.6 50 89-140 177-226 (241)
356 PF04226 Transgly_assoc: Trans 37.0 91 0.002 19.2 4.0 35 134-168 5-43 (48)
357 PRK02237 hypothetical protein; 34.3 78 0.0017 23.4 3.9 47 229-275 57-103 (109)
358 PF12794 MscS_TM: Mechanosensi 32.8 4E+02 0.0087 24.6 15.2 11 149-159 1-11 (340)
359 PF15061 DUF4538: Domain of un 32.6 42 0.00091 21.6 2.0 25 348-372 4-28 (58)
360 PF12805 FUSC-like: FUSC-like 31.8 3.7E+02 0.0081 23.9 9.1 35 64-98 3-38 (284)
361 TIGR02840 spore_YtaF putative 31.6 3.2E+02 0.0069 23.1 13.1 15 256-271 188-202 (206)
362 PF02990 EMP70: Endomembrane p 30.4 2.2E+02 0.0048 28.1 7.7 9 355-363 372-380 (521)
363 COG3202 ATP/ADP translocase [E 30.3 5.3E+02 0.012 25.2 24.8 78 287-367 290-369 (509)
364 TIGR00800 ncs1 NCS1 nucleoside 30.2 5E+02 0.011 24.9 19.2 59 110-169 5-66 (442)
365 KOG4112|consensus 30.1 1.2E+02 0.0026 21.6 4.1 34 324-359 27-60 (101)
366 PF09527 ATPase_gene1: Putativ 30.0 1.5E+02 0.0032 18.7 5.8 35 38-72 8-43 (55)
367 TIGR03802 Asp_Ala_antiprt aspa 29.3 4.1E+02 0.0089 26.6 9.3 6 348-353 160-165 (562)
368 PF06645 SPC12: Microsomal sig 29.1 1.5E+02 0.0032 20.4 4.5 31 333-365 20-50 (76)
369 PF01925 TauE: Sulfite exporte 28.9 3.7E+02 0.0079 22.9 17.1 32 129-160 69-100 (240)
370 PF10785 NADH-u_ox-rdase: NADH 28.9 2.1E+02 0.0046 20.2 5.6 40 44-83 32-78 (86)
371 PRK15049 L-asparagine permease 28.9 5.6E+02 0.012 25.1 13.0 46 28-76 31-76 (499)
372 PRK10263 DNA translocase FtsK; 28.7 3.7E+02 0.008 29.9 9.1 34 238-271 141-174 (1355)
373 PHA03231 glycoprotein BALF4; P 28.2 1.1E+02 0.0023 31.9 5.0 19 326-344 680-698 (829)
374 COG1811 Uncharacterized membra 28.2 2.3E+02 0.0049 24.1 6.0 57 239-296 14-70 (228)
375 PF09930 DUF2162: Predicted tr 27.8 3.9E+02 0.0085 22.9 9.8 50 220-272 123-172 (224)
376 PF02554 CstA: Carbon starvati 27.7 5.1E+02 0.011 24.2 17.9 38 110-153 48-86 (376)
377 PF13536 EmrE: Multidrug resis 27.2 2.6E+02 0.0056 20.6 7.1 18 253-270 84-101 (113)
378 COG1983 PspC Putative stress-r 26.8 2E+02 0.0042 19.5 4.5 35 142-176 20-65 (70)
379 PF05545 FixQ: Cbb3-type cytoc 26.5 1.6E+02 0.0035 18.0 4.2 7 366-372 26-32 (49)
380 TIGR01667 YCCS_YHJK integral m 26.1 4.4E+02 0.0095 27.3 9.1 120 44-178 37-161 (701)
381 TIGR00427 membrane protein, Ma 25.7 4E+02 0.0088 22.4 11.1 35 334-368 55-90 (201)
382 COG2233 UraA Xanthine/uracil p 25.0 6.3E+02 0.014 24.4 23.2 98 21-119 40-140 (451)
383 TIGR01666 YCCS hypothetical me 24.6 4.5E+02 0.0098 27.2 8.8 120 44-178 37-161 (704)
384 PRK01862 putative voltage-gate 24.2 7.3E+02 0.016 24.8 25.4 39 106-144 150-188 (574)
385 PF13937 DUF4212: Domain of un 24.1 2.6E+02 0.0056 19.6 5.2 53 116-168 9-63 (81)
386 PRK12847 ubiA 4-hydroxybenzoat 24.0 5.2E+02 0.011 23.0 11.4 15 63-77 95-109 (285)
387 PF15048 OSTbeta: Organic solu 23.7 85 0.0018 23.8 2.6 19 345-363 31-49 (125)
388 PF10183 ESSS: ESSS subunit of 23.5 1.3E+02 0.0027 22.3 3.5 33 143-175 53-85 (105)
389 TIGR00814 stp serine transport 22.9 6.6E+02 0.014 23.8 15.4 26 115-140 3-28 (397)
390 PF05653 Mg_trans_NIPA: Magnes 22.8 5.3E+02 0.011 23.3 8.1 108 154-275 13-120 (300)
391 PF02447 GntP_permease: GntP f 22.8 7E+02 0.015 24.1 11.9 28 233-260 61-97 (441)
392 PF07456 Hpre_diP_synt_I: Hept 22.5 3E+02 0.0066 21.8 5.6 51 37-93 68-118 (148)
393 PF06783 UPF0239: Uncharacteri 22.4 1.3E+02 0.0029 21.1 3.1 20 350-369 23-42 (85)
394 PLN02332 membrane bound O-acyl 22.3 7.3E+02 0.016 24.1 10.9 32 58-89 339-370 (465)
395 PF12273 RCR: Chitin synthesis 21.8 47 0.001 25.6 1.1 16 150-165 1-16 (130)
396 COG2119 Predicted membrane pro 21.8 3.3E+02 0.0071 22.5 5.7 37 39-75 143-179 (190)
397 COG0038 EriC Chloride channel 21.5 7.4E+02 0.016 23.9 22.2 40 105-144 144-183 (443)
398 COG5547 Small integral membran 21.2 2.4E+02 0.0052 18.1 5.1 18 260-277 10-27 (62)
399 PF13440 Polysacc_synt_3: Poly 21.1 5.1E+02 0.011 21.9 20.0 32 212-244 202-233 (251)
400 PHA03049 IMV membrane protein; 21.1 1.6E+02 0.0034 19.5 3.1 14 357-370 9-22 (68)
401 COG1971 Predicted membrane pro 20.4 5.1E+02 0.011 21.6 13.4 29 244-272 153-181 (190)
402 PF04024 PspC: PspC domain; I 20.3 2.5E+02 0.0054 18.3 4.0 34 142-175 19-60 (61)
403 PF04474 DUF554: Protein of un 20.0 4.1E+02 0.0088 22.9 6.3 59 239-298 13-71 (226)
No 1
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.7e-42 Score=309.54 Aligned_cols=354 Identities=24% Similarity=0.295 Sum_probs=308.3
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
.+|++++|+|.|..+.|++.|.|.+++.+++|+...+.||+.||++++....++.++++++++++||+.++++|++.|+.
T Consensus 35 LLp~iA~dl~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~alAp~f~~Ll~aR~~~g~a 114 (394)
T COG2814 35 LLPPIAADLGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVSNLLSALAPSFAVLLLARALAGLA 114 (394)
T ss_pred chHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC-C
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG-V 175 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~-~ 175 (414)
.|.+++...++..+..|| ++|++++++...+..++.++|.+++.++.+.+|||.+|++.+.++++..+..+...|++ .
T Consensus 115 ~G~f~~i~~~~a~~lvpp-~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~~F~~ia~l~ll~~~~~~~~lP~~~~ 193 (394)
T COG2814 115 HGVFWSIAAALAARLVPP-GKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRATFLAIAVLALLALLLLWKLLPPSEI 193 (394)
T ss_pred HHHHHHHHHHHHHHHcCc-cchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHhCCCccC
Confidence 999999999999999996 99999999999999999999999999999999999999999999999999888888822 2
Q ss_pred CCC-CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh
Q psy14075 176 VKQ-EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR 254 (414)
Q Consensus 176 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~ 254 (414)
+++ +.+..+..+.+|+|+++...+..++...+.+...+|+..++++..|+|....++.+..++++.++|+.+.|++.||
T Consensus 194 ~~~~~~~~~~~~~~l~~p~v~~~l~~t~l~~~g~F~~ftYi~P~L~~v~g~s~~~vs~~Ll~~Gv~~~~Gn~~gGrl~dr 273 (394)
T COG2814 194 SGSLPGPLRTLLRLLRRPGVLLGLLATFLFMTGHFALYTYIRPFLESVAGFSVSAVSLVLLAFGIAGFIGNLLGGRLADR 273 (394)
T ss_pred CCCCCcchhHHHHHhcCchHHHHHHHHHHHHcchhhhHHhHHHHHHHccCCCHhHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 221 1223357789999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHH
Q psy14075 255 MGRYLAALLGLLIIGICLMMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGF 333 (414)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 333 (414)
+.++.+.....+.++.++.+.+.. +.+......+++|+..... .+.......+ ..+|.+..+.++.....++|.
T Consensus 274 -~~~~~l~~~~~l~a~~~l~l~~~~~~~~~~~~~~~~wg~a~~~~---~~~~~~~~a~-~~p~~~~~a~sl~~aa~nlgi 348 (394)
T COG2814 274 -GPRRALIAALLLLALALLALTFTGASPALALALLFLWGFAFSPA---LQGLQTRLAR-LAPDAADLAGSLNVAAFNLGI 348 (394)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHhhhh---hhHHHHHhcc-cCCCchHHHHHHHHHHHHHHH
Confidence 888888888788877777766654 4444444444555544433 3444444555 334667999999999999999
Q ss_pred hHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075 334 AIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK 376 (414)
Q Consensus 334 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (414)
.+|..++|.+.|++|+....++.+...+++.++.+...+.+++
T Consensus 349 a~GA~lGG~v~~~~g~~~~~~~~a~l~~~a~~~~~~~~~~~~~ 391 (394)
T COG2814 349 ALGAALGGLVLDALGYAATGWVGAALLLLALLLALLSARKDRR 391 (394)
T ss_pred HHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999999999999998888877766554443
No 2
>PRK03545 putative arabinose transporter; Provisional
Probab=100.00 E-value=4.5e-41 Score=316.41 Aligned_cols=350 Identities=19% Similarity=0.218 Sum_probs=289.4
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
..|.+.+|+|.|++++|++.+.+.+++.+++++.|++.||+||||++..+.++++++++++++++|++.+++.|+++|++
T Consensus 31 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~ 110 (390)
T PRK03545 31 LLSDIAQSFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHVLSALAWNFTVLLISRIGIAFA 110 (390)
T ss_pred chHHHHhHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 46889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV 176 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 176 (414)
.+...+...+++.|++| +++|++++++...+.++|..++|++++.+.++.|||+.|++.+++.++..+..+...|++++
T Consensus 111 ~~~~~~~~~~~i~~~~~-~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~~ 189 (390)
T PRK03545 111 HAIFWSITASLAIRVAP-AGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTFLAIGGGALITLLLLIKLLPLLPS 189 (390)
T ss_pred HHHHHHHHHHHHHHhCC-hhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Confidence 99999999999999999 49999999999999999999999999999999999999999999888776666665555443
Q ss_pred CCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh
Q psy14075 177 KQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG 256 (414)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~ 256 (414)
+++++.++.++.+|+|.++......++..........+.+.++++..|.++.+.+......+++.++++++.+++.||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~~ 269 (390)
T PRK03545 190 EHSGSLKSLPLLFRRPALVSLYLLTVVVVTAHFTAYSYIEPFVQQVAGLSENFATLLLLLFGGAGIIGSVLFSRLGNRHP 269 (390)
T ss_pred CCcchHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCccHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 33333345677889998876666555555555556677888888888999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhH
Q psy14075 257 RYLAALLGLLIIGICLM-MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI 335 (414)
Q Consensus 257 ~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 335 (414)
+|+.. .+..+..++.. .....++.+......++.|++.+...+... ....+..| +.++++.|+.+...++|..+
T Consensus 270 ~~~~~-~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~~~~~~~-~~~~~~~g~~~~~~~~g~~~ 344 (390)
T PRK03545 270 SGFLL-IAIALLLVCLLLLLPAANSEWHLSVLSIFWGIAIMCIGLAMQ---VKVLKLAP-DATDVAMALFSGIFNIGIGA 344 (390)
T ss_pred hhHHH-HHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhcchHHHH---HHHHHhCC-CcHHHHHHHHHHHHHHHHHH
Confidence 87654 44444444433 333445555566667777777655433333 23445444 57799999999999999999
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 336 GPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 336 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
||.+.|.+.|+.|++..|...+.+.+++.+......+
T Consensus 345 G~~~~G~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 381 (390)
T PRK03545 345 GALLGNQVSLHLGLSSIGYVGAALALAALVWSILIFR 381 (390)
T ss_pred HHHHHHHHHhccChhHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999888888777766654
No 3
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=100.00 E-value=8.3e-40 Score=307.53 Aligned_cols=354 Identities=13% Similarity=0.053 Sum_probs=284.7
Q ss_pred ccccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy14075 14 EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ 93 (414)
Q Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 93 (414)
..+..|++++|+|+|.++.|++.+.+.+++.+++++.|+++||+|||+++..+..+++++.+++++++|++.+++.|+++
T Consensus 28 ~~~~lp~i~~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r~l~ 107 (393)
T PRK09705 28 VGPLLPQLRQASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSALLG 107 (393)
T ss_pred cchhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHHHHH
Confidence 34678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-CChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
|++.+...+...+++.+++| ++|+++++.+..+..+|..+++.+++.+.++. +||+.+.+.++..++..+..+...+
T Consensus 108 Gig~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~ 185 (393)
T PRK09705 108 GVGIGIIQAVMPSVIKRRFQ--QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALFAWWWQSA 185 (393)
T ss_pred HhHHHHHhhhhhHHHHHHcc--ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999985 67999999999999999999999999998875 8999887776665544433333333
Q ss_pred CCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhh
Q psy14075 173 PGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG 252 (414)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 252 (414)
++++++++++.+.++.+++|+.+...+..++....+.....+.|.|+++ +|.+..+++...+..+++.++++++.+++.
T Consensus 186 ~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~lp~~l~~-~g~s~~~ag~~~~~~~i~~i~g~~~~g~l~ 264 (393)
T PRK09705 186 REVASSHKTTTTPVRVVFTPRAWTLGVYFGLINGGYASLIAWLPAFYIE-IGASAQYSGSLLALMTLGQAAGALLMPAMA 264 (393)
T ss_pred CCCccccCCCcCCcccccCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhhhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3222222222334567788888877777777777888888999999987 799999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-cccchhhHHhHHHHHHHH
Q psy14075 253 HRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR-HTAVYGSVYAIGDVAFCL 331 (414)
Q Consensus 253 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~ 331 (414)
||++||+....+..+..++.+.+...++.... ....+.|++.+...+... ....+.. |++++++.+|+.+...++
T Consensus 265 ~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~l~g~g~g~~~~~~~---~~~~~~~~~~~~~g~~~g~~~~~~~~ 340 (393)
T PRK09705 265 RHQDRRKLLMLALVLQLVGFCGFIWLPLQLPV-LWAMVCGLGLGGAFPLCL---LLALDHSVQPAIAGKLVAFMQGIGFI 340 (393)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHccchHHH-HHHHHHHHhccchHHHHH---HHHHhhcCCHHHHHHHHHHHHHHHHH
Confidence 99999998888887777776655432221111 223445666665544322 2234444 456789999999999999
Q ss_pred HHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075 332 GFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLRNPP 374 (414)
Q Consensus 332 g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (414)
+..++|.+.|++.|..| +...|.+.++++++..+....+++++
T Consensus 341 ~~~~gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (393)
T PRK09705 341 IAGLAPWFSGVLRSISGNYLMDWAFHALCVVGLMIITLRFAPAR 384 (393)
T ss_pred HHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999999987 78888887777777666655554443
No 4
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.9e-41 Score=298.58 Aligned_cols=358 Identities=18% Similarity=0.159 Sum_probs=306.1
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 94 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (414)
+.+.|.+.+|.++|.+|+|++.+++++.|.++..+.|.++||.++|+.+..++++.++.+++++++++.+.+.+..++.|
T Consensus 49 ~~a~p~l~e~~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~s~~~~~~l~~lng 128 (448)
T COG2271 49 NLAMPALIEDGGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSPSLFLFAVLWVLNG 128 (448)
T ss_pred hhccHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 45677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhh--hHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG--GIMYQFVGKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~--~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
..+|..+|++...+++|+| ++|||+..++++++.++|..+.|++. +.+..+.+||..|++.++++++..+..++..+
T Consensus 129 ~fQg~Gwpp~~~~i~~Wfs-r~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pgiiaiival~~~~~~r 207 (448)
T COG2271 129 WFQGMGWPPCARTITHWFS-RKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPGIIAIIVALILLFLLR 207 (448)
T ss_pred HHhcCCCcHHHHHHHHHcC-ccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999999999999999 59999999999999999999999999 89998899999999999999999998888877
Q ss_pred CCCCCC-----------------C-CCC--ch-----hhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075 173 PGVVKQ-----------------E-VEP--PT-----LKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK 227 (414)
Q Consensus 173 ~~~~~~-----------------~-~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 227 (414)
++|++. + +++ .+ .+-+++||.+|.+++..++....-+++..|.|.|+.|+.|+|.
T Consensus 208 d~Pqs~GLP~ie~~~~d~~e~~~~~~~~~~ls~~~i~~~YVL~Nk~iW~la~a~vfvYivR~gi~dW~p~YL~e~k~~s~ 287 (448)
T COG2271 208 DRPQSEGLPPIEEYRGDPLEIYEEEKENEGLTAWQIFVKYVLKNKLIWLLALANVFVYVVRYGINDWGPLYLSEVKGFSL 287 (448)
T ss_pred CCccccCCCCHHHhhcCchhhhhhhccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhcCCCH
Confidence 655321 0 111 11 2346799999999999999999999999999999999999999
Q ss_pred cchhhHhHHHHHHHHhhhhhhhhhhhhhh--hH-HHHHHHHHHHHHHHHHhhhhhhh--HHHHHHHHHHHHHHHhhhhhh
Q psy14075 228 WQQGVSFLPASISYLIGTNLFGPLGHRMG--RY-LAALLGLLIIGICLMMIPLARNI--NHLIVPNAGLGFAIGMVDSSM 302 (414)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~--~~-~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~g~~~~~~~~~~ 302 (414)
.+++...+.+-.+++.|.++.|+++||+- || ..-++++++..++.+.+...++. ....+..++.|+.....+ +
T Consensus 288 ~~a~~a~~lfE~agl~G~Ll~GwlSDklfkgrR~p~~~i~~~~i~~~~~~~w~~~~~~~~l~~~~l~~iGf~IyGPq--m 365 (448)
T COG2271 288 VKANWAISLFEVAGLPGTLLAGWLSDKLFKGRRGPMALIFMLLITASLVLYWLAPNGSYLLDAILLFIIGFLIYGPQ--M 365 (448)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHcCCCccHHHHHHHHHHHHHHHhhHH--H
Confidence 99999999999999999999999999963 44 44455666667777777776644 444455555555544332 2
Q ss_pred hhhhhhhhhcccccchhhHHhHHHHHHHH-HHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075 303 MPELGYLVDIRHTAVYGSVYAIGDVAFCL-GFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK 376 (414)
Q Consensus 303 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (414)
. .-....|..|++..|++.|+...+.++ |.+.+....|++.|.+||...|++..+.++++.+++....+.+++
T Consensus 366 L-iGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g~i~d~~gW~g~Fi~~~~~a~l~~lll~~~~~~~~~ 439 (448)
T COG2271 366 L-IGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLGYIADTWGWDGGFIVLSIAALLAILLLLPVWNAEER 439 (448)
T ss_pred H-HHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcceeeEecCCCcchHHHHHHHHHHHHHHHHHHHhhcch
Confidence 2 222467899999999999999999999 999999999999999999999999988888887777666554443
No 5
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=100.00 E-value=1e-39 Score=313.86 Aligned_cols=358 Identities=16% Similarity=0.107 Sum_probs=280.6
Q ss_pred cccccccCCcccccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh----
Q psy14075 4 GRSHLTEITPEDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF---- 79 (414)
Q Consensus 4 ~r~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---- 79 (414)
||.++ .+..|.+.+|+|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++.++
T Consensus 44 ~r~~~------~~~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~ 117 (467)
T PRK09556 44 IRKNF------KAAQNDMISTYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGS 117 (467)
T ss_pred HhcCh------hhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhc
Confidence 55555 34567888999999999999999999999999999999999999999999888888777766655
Q ss_pred -hhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc---CChhHHHH
Q psy14075 80 -GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV---GKTAPFLI 155 (414)
Q Consensus 80 -~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~---gw~~~f~~ 155 (414)
+++++.+++.|+++|++.+...|...++++||+|+ ++|++++|+.+.+.++|.++++++..++.+.. +||..|.+
T Consensus 118 ~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~ 196 (467)
T PRK09556 118 GSVSLGLMIALWALSGFFQSTGGPCSYSTITRWTPR-RKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIF 196 (467)
T ss_pred ccchHHHHHHHHHHHHHHHhccchHHHHHHHHHcCc-cceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHH
Confidence 68999999999999999999999999999999994 99999999999999999999999987777653 69999999
Q ss_pred HHHHHHHHHHHHHHhccCCCCCC---------------CC-----CCch----h-hhhccChHHHHHHHHHHHHHHHHHh
Q psy14075 156 LSALALGDGLLQLLLLQPGVVKQ---------------EV-----EPPT----L-KSLVMDPYILIAAGAITFANTGIAM 210 (414)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~---------------~~-----~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (414)
.+++.++..++.+++.++++++. ++ ++.+ + ++.+|+|.+|...+..++....+..
T Consensus 197 ~g~~~~~~~i~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 276 (467)
T PRK09556 197 PSIIALIIGFIGLRYGSDSPEELGWGKAEEIFGEPISEEDKETESTDMTKWQIFVEYVLKNPVIWLLCFANIFLYIVRIG 276 (467)
T ss_pred HHHHHHHHHHHHHHhCCCChhhcCCCChhhcccCccchhhhccccccCcHHHHHHHHHHcChHHHHHHHHHHHHHHHHHH
Confidence 88888777666666544332110 00 0111 1 1267899999988888888888888
Q ss_pred hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH--hhhhhhhHHHHHHH
Q psy14075 211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM--IPLARNINHLIVPN 288 (414)
Q Consensus 211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~--~~~~~~~~~~~~~~ 288 (414)
...|+|.|+++.+|++..+++.......++.+++.++.|+++||+++|+.......+..++... +...++.....+..
T Consensus 277 ~~~~~p~yl~~~~g~s~~~a~~~~~~~~~~~~ig~~~~G~lsDr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 356 (467)
T PRK09556 277 IDNWSPVYAFQELGFSKEDAINTFTLFEIGALVGSLLWGWLSDLANGRRALVACIALALIIFTLGVYQHATSEYMYLASL 356 (467)
T ss_pred HHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCchHHHHHHHHHHHHHHHHHHhcCcHHHHHHHH
Confidence 8899999999989999999999999999999999999999999999887765544433333222 22223333333444
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHH-HHhHHHHHHHHHHh------------hhchHHHHHH
Q psy14075 289 AGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCL-GFAIGPAMSGTLVN------------TIGFEWMLFI 355 (414)
Q Consensus 289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~------------~~g~~~~~~~ 355 (414)
++.|++.... .........|..|++.+|++.|+.+...++ |.+++|.+.|++.| ..||+..|.+
T Consensus 357 ~~~G~~~~~~---~~~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~i~~~~~~g~~~~~~~~~~~~~~f~~ 433 (467)
T PRK09556 357 FALGFLVFGP---QLLIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGMIADPTKNGTPIFGYTLTGWAGTFAA 433 (467)
T ss_pred HHHHHHHhhH---HHHHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHHHhcccccccccccccccChHHHHHH
Confidence 4444332211 111112355889999999999999999997 77999999999999 6789999999
Q ss_pred HHHHHHHHHHHHHHhc
Q psy14075 356 IAILDFMYAPLLYLLR 371 (414)
Q Consensus 356 ~~~~~~~~~~~~~~~~ 371 (414)
..++.+++.+..+.++
T Consensus 434 ~~~~~~~~~~~~~~~~ 449 (467)
T PRK09556 434 LDIAAIGCICLMAIVA 449 (467)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 8888888776666553
No 6
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=100.00 E-value=1e-37 Score=293.19 Aligned_cols=342 Identities=15% Similarity=0.163 Sum_probs=274.2
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
.+|++.+++|.+++++|+..+.+.++..+++++.|+++||+||||++..+.++.+++.++++++++++.+++.|+++|++
T Consensus 42 ~l~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 121 (394)
T PRK10213 42 LLTPMAQDLGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRACLGLA 121 (394)
T ss_pred hHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHHHHHHh
Confidence 36889999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV 176 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 176 (414)
.+...+...+++.|++| +|+|++++++.....++|..++|++++.+.+++|||+.|++.+++.++..+......|++++
T Consensus 122 ~g~~~~~~~~~i~~~~~-~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~~~~~~p~~~~ 200 (394)
T PRK10213 122 LGGFWAMSASLTMRLVP-PRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFWIIKSLPSLPG 200 (394)
T ss_pred hHHHHHHHHHHHHHHcC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHCCCCCc
Confidence 99999999999999999 49999999999999999999999999999999999999999988777665555444555433
Q ss_pred CCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhch-HHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075 177 KQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSL-PIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM 255 (414)
Q Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 255 (414)
+++++.++.++.+|+|.++...+..++..........+. |.|. +++|+++.+.+..+...+++.+++.++.+++.||.
T Consensus 201 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-~~~g~s~~~~g~~~~~~~~~~iig~~~~~~l~~r~ 279 (394)
T PRK10213 201 EPSHQKQNTFRLLQRPGVMAGMIAIFMSFAGQFAFFTYIRPVYM-NLAGFGVDGLTLVLLSFGIASFVGTSLSSFILKRS 279 (394)
T ss_pred ccccchhHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 333333456678899998877665555555555556666 5554 55799999999999999999999999999999996
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhH
Q psy14075 256 GRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 335 (414)
+++.............+++....++.+......++.|++.+...+..... ..+..| +++++..+......++|..+
T Consensus 280 ~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~G~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~lg~~~ 355 (394)
T PRK10213 280 VKLALAGAPLVLAVSALVLTLWGSDKIVATGVAIIWGLTFALVPVGWSTW---ITRSLA-DQAEKAGSIQVAVIQLANTC 355 (394)
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHhhhHHHHHH---HHHHCc-ccHHHHHHHHHHHHHHHHHH
Confidence 54433433333333334444455556666667778888887776555544 334444 34567777777888999999
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy14075 336 GPAMSGTLVNTIGFEWMLFIIAILDFMYA 364 (414)
Q Consensus 336 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 364 (414)
||.+.|++.|..|++..+...+++.++..
T Consensus 356 G~~l~G~l~~~~g~~~~~~~~~~~~~~~~ 384 (394)
T PRK10213 356 GAAIGGYALDNIGLTSPLMLSGTLMLLTA 384 (394)
T ss_pred HHHHHHHHHhccChhhHHHHHHHHHHHHH
Confidence 99999999999998888887766555443
No 7
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=100.00 E-value=5.7e-38 Score=290.82 Aligned_cols=341 Identities=13% Similarity=0.071 Sum_probs=260.4
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
+..|.+++|+|+|+++.|++.+.+.+++.+++++.|+++||+|||+++..+......+.+.....+|++.+++.|+++|+
T Consensus 12 ~~lp~i~~~~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~ 91 (368)
T TIGR00903 12 PVLSLVAEDIDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLLACQLLAAL 91 (368)
T ss_pred hhHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999999988776665555554433444799999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+.. +...+.++|++|+ |+|++++++.+.+.++|..++++++..+.+++|||+.|++.++++++..++.++..||++
T Consensus 92 g~~~~-~~~~~~~~~~~~~-~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~~~~~~lp~~p 169 (368)
T TIGR00903 92 GQPFL-LNAFAPAASQIRE-ERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGIILVLAALPALP 169 (368)
T ss_pred HhHHH-HHHHHHHHHHcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 99964 5556677999995 999999999999999999999999999999999999999999988887777777777654
Q ss_pred CCCCCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhh
Q psy14075 176 VKQEVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFG 249 (414)
Q Consensus 176 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 249 (414)
+++++. .+++++++|||.+|...+..++....++.+.+|+|.|+++ .|++.. .+.......+.+.++. +
T Consensus 170 ~~~~~~~~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~wlp~~L~~-~g~s~~-~~~~~~l~~~~g~~g~---~ 244 (368)
T TIGR00903 170 FQAAEGFGFKDAVKEFGALAGRKDLWIIGAILGFGVALFDNLAIWLEAALRP-AGLEDI-AGDAVALAILAGLIGV---A 244 (368)
T ss_pred CCCCCCcchHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCChH-HHHHHHHHHHHHHHHH---H
Confidence 432211 1246788999999999999999999999999999999977 578764 5665555555555554 6
Q ss_pred hhhhhhhh---HHHHH-HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHH
Q psy14075 250 PLGHRMGR---YLAAL-LGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIG 325 (414)
Q Consensus 250 ~l~d~~~~---~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 325 (414)
+++||.+| |+... ....+.++.+..+....+.........+.+++.....+ ....+..|.+|++.||++.|+.
T Consensus 245 ~~~d~~~r~~~r~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~p~~~rgt~~G~~ 321 (368)
T TIGR00903 245 VIPDRVARAGLRSIYIRAAALLIAAFFLALAFELNRLALFAFIGIAGLLMLPAYA---IIMDWIGKFCDKELHGKAAGAI 321 (368)
T ss_pred HhhHHhhhhhhHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhhhhhHH---HHHHHHHHhcchhhcCcccchh
Confidence 67777643 33322 23444444444444443333333333334443333322 2334577999999999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy14075 326 DVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 326 ~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 368 (414)
+...++++.++|.+.+.+.. |.+..|.+.++..+++.+...
T Consensus 322 ~~~g~~~~~~~~~~~~~~~~--~~~~~f~~~~~~~~i~~~~~~ 362 (368)
T TIGR00903 322 GFTSRAISVALALAAMLFIS--SAEAYFTFLAILITIAFAIAL 362 (368)
T ss_pred hHHHHHHHHHHHHHHHHHhc--CHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999998874 777888888877777766654
No 8
>PRK10091 MFS transport protein AraJ; Provisional
Probab=100.00 E-value=7.6e-38 Score=293.49 Aligned_cols=352 Identities=16% Similarity=0.195 Sum_probs=275.8
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
...|.+.+|+|.|.++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|+++|+
T Consensus 24 ~~l~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~l~~~~~~~~~l~~~r~l~G~ 103 (382)
T PRK10091 24 GVLTELAHDVGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIGNAMFTLSSSYLMLAIGRLVSGF 103 (382)
T ss_pred hChHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+....++.|++| +++|++++++...+..+|..++|++++.+.+..+||+.|++.+++.++..+..++..|+.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~~f~~~~~~~~~~~~~~~~~lp~~~ 182 (382)
T PRK10091 104 PHGAFFGVGAIVLSKIIK-PGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRYTFLLIAVFNIAVLASIYFWVPDIR 182 (382)
T ss_pred hhHHHHHHHHHHHHHhCC-hHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999988888889999998 4899999999999999999999999999999899999999999988777666555555543
Q ss_pred CCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075 176 VKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM 255 (414)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 255 (414)
++++.+.++..+.+|++..+......++..........+++.|+++.+|.++.+.+.+....+++.++++++.+++.||+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~~r~ 262 (382)
T PRK10091 183 DEAKGGLREQFHFLRSPAPWLIFAATMFGNAGVFAWFSYIKPYMMFISGFSETSMTFIMMLVGLGMVLGNLLSGRLSGRY 262 (382)
T ss_pred cccccCHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHhHHHheecccc
Confidence 33222222334567788777665555555445555556777788877899999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhh-hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHh
Q psy14075 256 GRYLAALLGLLIIGICLMMIPL-ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFA 334 (414)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 334 (414)
++|+.+..+..+.+++.+.+.. .++.+...+..++.+.+.+...+..... ...+..+++.++.+ ..+...++|..
T Consensus 263 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~~~~~~~~~~--~~~~~~~~g~~ 338 (382)
T PRK10091 263 SPLRIAAVTDFIIVLALLMLFFFGGMKTASLIFAFICCAGLFALSAPLQIL--LLQNAKGGELLGAA--GGQIAFNLGSA 338 (382)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhhHHHHHH--HHHhCCcchHHHHH--HHHHHHHHHHH
Confidence 9999888888887777655543 3333444444444555444332222211 12233334444443 34677899999
Q ss_pred HHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 335 IGPAMSGTLVNT-IGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 335 ig~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
+||.+.|.+.|. .+|+..+.+.+++.++.........+
T Consensus 339 ~Gp~~~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (382)
T PRK10091 339 IGAYCGGMMLTLGLAYNYVALPAALLSFAAMSSLLLYGR 377 (382)
T ss_pred HHHHHhHHHHHcccCcchHHHHHHHHHHHHHHHHHHHhh
Confidence 999999999996 57999998887777766655554443
No 9
>PRK11663 regulatory protein UhpC; Provisional
Probab=100.00 E-value=8e-38 Score=297.97 Aligned_cols=353 Identities=16% Similarity=0.138 Sum_probs=273.5
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 94 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (414)
....|.+.+++|.|+++.|++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++++++++++.+++.|++.|
T Consensus 43 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g 122 (434)
T PRK11663 43 NAAMPEMLADLGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILFGFSSSLWAFALLWVLNA 122 (434)
T ss_pred HHhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 34568888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG 174 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 174 (414)
++.|...+...+++.|++| +++|++++++.+.+.++|..++|.+++.+.+++|||+.|++.+++.++..+...+..+|+
T Consensus 123 ~~~g~~~~~~~~~~~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~~~i~~~~~~~~~~~~~~~~ 201 (434)
T PRK11663 123 FFQGWGWPVCAKLLTAWYS-RTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMIAGIIAIVVGLFLCWRLRDK 201 (434)
T ss_pred HHHHccchHHHHHHHHhCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999 589999999999999999999999999999999999999999887766555544444333
Q ss_pred CCCC----------------C---CCCchhhh-----hccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccch
Q psy14075 175 VVKQ----------------E---VEPPTLKS-----LVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQ 230 (414)
Q Consensus 175 ~~~~----------------~---~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 230 (414)
+++. + +++.+.++ .+|+|.++...+..++....+..+..|+|.|+++.+|++..++
T Consensus 202 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a 281 (434)
T PRK11663 202 PQAMGLPSVGEWRHDALELAQQQEGAGLSRKEILTKYVLLNPYIWLLSFSYVLVYVVRAAINDWGNLYMSETLGVDLVTA 281 (434)
T ss_pred HhhcCCCCcccccccccccchhccccCCChhhhHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCHHHH
Confidence 2110 0 00112222 4567888887777777777777888899999988789999999
Q ss_pred hhHhHHHHHHHHhhhhhhhhhhhhh--hhH-HHHHH---HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075 231 GVSFLPASISYLIGTNLFGPLGHRM--GRY-LAALL---GLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMP 304 (414)
Q Consensus 231 g~~~~~~~~~~~~~~~~~g~l~d~~--~~~-~~~~~---~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 304 (414)
+...+...++..+++++.|+++||+ ++| ..... +.....+++..+.. .+...... .+.+++.....+ ...
T Consensus 282 ~~~~~~~~~~~~~g~~~~g~l~dr~~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~g~~~~~~-~~~ 357 (434)
T PRK11663 282 NSAVSMFELGGFIGALVAGWGSDKLFNGNRGPMNLIFAAGILLSVGSLWLMPF-ASYVMQAA--CFFTIGFFVFGP-QML 357 (434)
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHhccCCccHHHHHHHHHHHHHHHHHHHccc-ccHHHHHH--HHHHHHHHHhhH-HHH
Confidence 9999999999999999999999998 222 22222 22222222222221 22222222 222333222211 111
Q ss_pred hhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 305 ELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
......|..|++.+|++.|+.+...++|.+++|.+.|++.|+.||+..|...+++.+++.+..+...+
T Consensus 358 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~ 425 (434)
T PRK11663 358 IGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAKVLEIWHWTGFFVVISIAAGISALLLLPFLN 425 (434)
T ss_pred HHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 12235677888899999999999999999999999999999999999999998888887766554443
No 10
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=100.00 E-value=1.5e-37 Score=300.48 Aligned_cols=328 Identities=19% Similarity=0.179 Sum_probs=276.7
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 94 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (414)
++++|.+.+|+|.+.++.+|+.+.+.+++.++++++|+++||+|||++++.+.++++++++++++++|++.++++|+++|
T Consensus 26 ~~a~p~i~~~l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~~~~a~~~~~li~~r~l~G 105 (495)
T PRK14995 26 HVAAPTLSMTLGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLAAAFSPTASWLIATRALLA 105 (495)
T ss_pred HHHHHHHHHHhCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG 174 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 174 (414)
+|.+...+.....+.++++++++|+++++++....++|..+||.+++.+.++++||+.|++...+.++..++..+..|++
T Consensus 106 ~g~~~~~~~~~~~l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f~i~~~~~~~~~~l~~~~l~~~ 185 (495)
T PRK14995 106 IGAAMIVPATLAGIRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVFLINVPIVLVVMGLTARYVPRQ 185 (495)
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 99999999888888787633589999999999999999999999999999999999999999888887777766666654
Q ss_pred CCCCCCCCc---------------------------h-----------------------------hhhhccChHHHHHH
Q psy14075 175 VVKQEVEPP---------------------------T-----------------------------LKSLVMDPYILIAA 198 (414)
Q Consensus 175 ~~~~~~~~~---------------------------~-----------------------------~~~~~~~~~~~~~~ 198 (414)
+++++++.+ . ..+++|+|.+....
T Consensus 186 ~~~~~~~~d~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~~~e~~~~~p~~~~~lf~~~~~~~~~ 265 (495)
T PRK14995 186 AGRRDQPLNLGHALMLIVAILLLVYSAKTALKGFLSLWVTSLTLLTGALLLGLFIRTQLAASRPMIDMRLFTHRIILSGV 265 (495)
T ss_pred CCCCCCCCChHhHHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhcCCCCCcCHHHhCCcccHHHH
Confidence 332111100 0 02456777777777
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q psy14075 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA 278 (414)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~ 278 (414)
+..++..........++|.|+++.+|+++.++|.......++..++.++.|++.||+++|+.+..+..+..++...+...
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~lq~v~g~s~~~ag~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~~~ 345 (495)
T PRK14995 266 VMAMTAMITLVGFELLMAQELQFVHGLSPLEAGMFMLPVMVASGFSGPIAGILVSRLGLRLVATGGMALSALSFYGLAMT 345 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHh
Confidence 77777777777788899999999999999999999999999999999999999999999998888888877776655432
Q ss_pred ---hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh
Q psy14075 279 ---RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN 345 (414)
Q Consensus 279 ---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~ 345 (414)
++.+......++.|++.+...+... ....+..|+++++.+.++.++.+++|+.+|+.+.|.+.+
T Consensus 346 ~~~~~~~~~~~~~~l~G~g~g~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~lG~~~G~ai~g~i~~ 412 (495)
T PRK14995 346 DFSTQQWQAWGLMALLGFSAASALLAST---SAIMAAAPPEKAAAAGAIETMAYELGAGLGIAIFGLLLS 412 (495)
T ss_pred cCCCchHHHHHHHHHHHHhHHHHHHHHH---HHHHhcCCHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 2344455667788888887754333 335567788889999999999999999999999999875
No 11
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=100.00 E-value=1.1e-37 Score=292.08 Aligned_cols=344 Identities=17% Similarity=0.197 Sum_probs=281.9
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 94 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (414)
.+..|.+.+++|.|++++|++.+++.+++.+++++.|+++||+|||+++..+.++.+++.+++++++|++.+++.|++.|
T Consensus 23 ~~~~~~~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 102 (377)
T TIGR00890 23 TLLAPPLGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLTYGLAS 102 (377)
T ss_pred hhHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34578899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG 174 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 174 (414)
++.+..++.....+.+++| |+|+++.++...+.++|..+++++.+.+.+..+||+.|++.+++.++..+..+++.+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~ 180 (377)
T TIGR00890 103 AGVGIAYGIALNTAVKWFP--DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLGAFLIGYP 180 (377)
T ss_pred HHHHHHHHhHHHHHHHHcC--cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHheecC
Confidence 9999988888888999986 57999999999999999988887877788888999999999998888777766655433
Q ss_pred CCCC--CC-----CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhh
Q psy14075 175 VVKQ--EV-----EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNL 247 (414)
Q Consensus 175 ~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 247 (414)
++++ ++ ++.+.++.+|+|.++......++..........+.+.|.++ +|.+..+.+.......++.++++++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 259 (377)
T TIGR00890 181 PGQLIKTNIEVSVKDYTVWEMLRTPQFWVLYLSFFLNAVSGLLLIGLYKPYGQS-LGLSDGFLVLAVSISSIFNGGGRPF 259 (377)
T ss_pred chhccccCcccchhhhhHHHHHcCccHHHHHHHHHHHhHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 2211 11 11245677888888877766666655555566667777655 7888888899999999999999999
Q ss_pred hhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhH--HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHH
Q psy14075 248 FGPLGHRMGRYLAALLGLLIIGICLMMIPLARNIN--HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIG 325 (414)
Q Consensus 248 ~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 325 (414)
.+++.||++||+.+..+..+..++.+.+...++.. ......++.+++.+...+... ....|..|+++|+++.|+.
T Consensus 260 ~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~---~~~~~~~~~~~~~~~~g~~ 336 (377)
T TIGR00890 260 LGALSDKIGRQKTMSIVFGISAVGMAAMLFIPMLNDVLFLATVALVFFTWGGTISLFP---SLVSDIFGPANSAANYGFL 336 (377)
T ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHcccchhHHHHHHHHHHHHHhccchhccH---HHHHHHhhhhhhhhHhHHH
Confidence 99999999999999888888888877666654322 222334555666555443333 2356778889999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy14075 326 DVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYA 364 (414)
Q Consensus 326 ~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 364 (414)
+....+|..++|.+.|.+.|..||+..|.+.+++.+++.
T Consensus 337 ~~~~~~g~~~~~~~~g~l~~~~g~~~~f~~~~~~~~~~~ 375 (377)
T TIGR00890 337 YTAKAVAGIFGGLIASHALTEIGFEYTFIVTGAFALTSL 375 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhchhhHHHHHHHHHHHhc
Confidence 999999999999999999999999999988877766643
No 12
>TIGR00893 2A0114 d-galactonate transporter.
Probab=100.00 E-value=3.2e-37 Score=290.75 Aligned_cols=349 Identities=20% Similarity=0.194 Sum_probs=280.6
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 94 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (414)
....|.+.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus 14 ~~~~~~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g 93 (399)
T TIGR00893 14 SFAAPMLQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILRVLLG 93 (399)
T ss_pred hHhHHHHHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHH
Confidence 34567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG 174 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 174 (414)
++.+...+...+++.|++| +++|++++++.+...++|..+++.+++.+.+..+||+.|++.+++.++..+..++..+++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 172 (399)
T TIGR00893 94 AAEAPFFPGIILIVASWFP-ASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWLKFIPDP 172 (399)
T ss_pred HHHHhhhhHHHHHHHHhCC-HHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhhheecCC
Confidence 9999999999999999999 499999999999999999999999999999999999999999988887777666555443
Q ss_pred CCCCC-------------------------CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc
Q psy14075 175 VVKQE-------------------------VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ 229 (414)
Q Consensus 175 ~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 229 (414)
+++++ +++.+.++.+|+|+++...+..++..........+.|.|+++.+|.++.+
T Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 252 (399)
T TIGR00893 173 PQKAKWLTEEEKYIVVGGLLAEQQGKGPSTPKKYQIKELLKDRRVWGLALGQFLVNIGLGFFLTWFPTYLVQERGLSILE 252 (399)
T ss_pred CCccccCCHHHHhhcchhhccccccccccCCCccchHHHhcCHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhcccHHH
Confidence 32110 01112456788999998888888888888889999999999989999999
Q ss_pred hhhHhHHHHHHHHhhhhhhhhhhhhhhhHH--HHHH------HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhh
Q psy14075 230 QGVSFLPASISYLIGTNLFGPLGHRMGRYL--AALL------GLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSS 301 (414)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~--~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 301 (414)
.+.......++.+++.++.+++.||++||+ .... +.....+........++.+.......+.+.+.+ .
T Consensus 253 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--- 328 (399)
T TIGR00893 253 AGFMASLPGIVGFIGMILGGRLSDLLLRRGKSLVFARKTAIIAGLVLSLLMFATNYVNIPYAALALVALGFFGLG-A--- 328 (399)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhcccchhHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHhchh-h---
Confidence 999999999999999999999999999885 1111 111111111111111222222222222222222 2
Q ss_pred hhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHH
Q psy14075 302 MMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 302 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 368 (414)
.........|..|++.|+++.|+.+...++|..++|.+.|.+.|..| ++..|.+.+++.+++.+..+
T Consensus 329 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 396 (399)
T TIGR00893 329 GAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGAIAATTGSFAGALMVVAALALIGALSYL 396 (399)
T ss_pred hhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhhhccCCCchhHHHHHHHHHHHHHHHHHH
Confidence 23334456788899999999999999999999999999999999999 99999888887777666554
No 13
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=100.00 E-value=8.2e-38 Score=295.57 Aligned_cols=339 Identities=15% Similarity=0.097 Sum_probs=264.2
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
..|.+.+|+|+|.+++|++.+.+.+++.+++++.|++.||+|||+++..+.++++++++++++++|++.+++.|+++|++
T Consensus 30 ~~~~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 109 (412)
T TIGR02332 30 AGLTMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTATMFATGPESLYLLRILVGIA 109 (412)
T ss_pred HHHhhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 45677899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh------hcCChhHHHHHHHHHHHHHHHHHHh
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ------FVGKTAPFLILSALALGDGLLQLLL 170 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~------~~gw~~~f~~~~~~~~~~~~~~~~~ 170 (414)
.+...|...+++.|++| +++|++++++++.+.++|..+++.+++.+.+ ..|||+.|++.++..++..++.+++
T Consensus 110 ~~~~~~~~~~~~~~~~~-~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gwr~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 110 EAGFLPGILLYLTFWFP-AYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGWQWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred HhhHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccchhHHHHHHHHHHHHHHHHHhhc
Confidence 99999999899999999 4899999999999999999999999998874 3699999999998888776666666
Q ss_pred ccCCCCCCC-----------------------CC----C------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHH
Q psy14075 171 LQPGVVKQE-----------------------VE----P------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPI 217 (414)
Q Consensus 171 ~~~~~~~~~-----------------------~~----~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (414)
.||++++++ ++ + ..++++ ++|.+|...+..++....+..+.+|+|.
T Consensus 189 ~~~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 267 (412)
T TIGR02332 189 LDDSPDKAKWLDEEDKKALKEMIDNDQLTLEQPEGAFAHAAMPQRSMLREI-FTPAIMLYTLAYFCLTNTLSAINIWTPQ 267 (412)
T ss_pred cCCCcccCCCCCHHHHHHHHHHHHhccccccccccccccccccHHHHHHHh-cChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 655442210 00 0 011222 3567777777777777888889999999
Q ss_pred HHHHH-hCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHH-HHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH
Q psy14075 218 WMMDT-MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLA-ALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAI 295 (414)
Q Consensus 218 ~~~~~-~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~ 295 (414)
|+++. .|.+..+++.......++.+++.++.|+++||+++|+. .........+++++....++.........+.+++.
T Consensus 268 ~l~~~~~~~s~~~~~~~~~~~~l~~~~g~l~~g~l~dr~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 347 (412)
T TIGR02332 268 ILQSFNQGSSNIMIGLLAAIPQFCTIFGMIWWSRHSDRLKERKHHTALPYLFAAAGWLLASATDHNLIQLLGIIMASMGS 347 (412)
T ss_pred HHHhcCCCCcHHHhHHHhhHHHHHHHHHHHHHHHHhcccCccHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 99873 46778888999999999999999999999999987664 33344444444332222222221122222222222
Q ss_pred HhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHH
Q psy14075 296 GMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILD 360 (414)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~ 360 (414)
... .........+..|+++|++++|+.+...++|++++|.+.|.+.|..| |+..+.+.+++.
T Consensus 348 ~~~---~~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~i~~~~g~~~~~~~~~~~~~ 410 (412)
T TIGR02332 348 FSA---MAIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGILKDATGSFNSGLWFVAALL 410 (412)
T ss_pred hhh---hhHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhcccccccCCCCchhHHHHHHHH
Confidence 111 11111223456788899999999999999999999999999999886 998888766543
No 14
>PRK03699 putative transporter; Provisional
Probab=100.00 E-value=6e-37 Score=288.60 Aligned_cols=353 Identities=13% Similarity=0.097 Sum_probs=281.5
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
...|++.+++|.|+++.+++.+.+.+++.+++++.|++.||+||||++..+.++.+++.++++++++++.+++.|+++|+
T Consensus 28 ~~~~~i~~~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~~l~G~ 107 (394)
T PRK03699 28 MVMGPIAEYFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVAGLMFSHSLALFSIAMFVLGV 107 (394)
T ss_pred hhhHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHH
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-hcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-FVGKTAPFLILSALALGDGLLQLLLLQPG 174 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 174 (414)
+.+...+...+++.|++| +++|+++++..+...++|..++|.+.+.+.+ ..+||+.|.+.+++.++..++.++...|+
T Consensus 108 ~~g~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~f~~~~~~~~~~~~~~~~~~~p~ 186 (394)
T PRK03699 108 VSGITMSIGTFLITHVYE-GKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWVYACIGLVYVAIFILTLFSEFPA 186 (394)
T ss_pred hhHhhccchhHHhhhhcc-cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 999999888999999998 4899999999999999999999999888764 57999999998888777655544332222
Q ss_pred CCCCCC-CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh
Q psy14075 175 VVKQEV-EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH 253 (414)
Q Consensus 175 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d 253 (414)
++++++ +..+..+...++.++...+..++....+..+..|+|.|+++.+|+++.+.+...+...++..+++++.++++|
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~~~~~~~~~~~~~~ig~~~~g~l~d 266 (394)
T PRK03699 187 LGKHAPKADKPVAKEKWGIGVLFLAIAALLYILAQLTFISWVPEYAQKKFGMSLEDAGNLVSNFWMAYMVGMWIFSFIVR 266 (394)
T ss_pred ccccCccccCccccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 111111 1111111223566676666667766777788899999999889999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHH
Q psy14075 254 RMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGF 333 (414)
Q Consensus 254 ~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 333 (414)
|+++|+.+.....+..+.+.++...++.+......++.|++.+...+.... ...+..| +.+++..+......++|.
T Consensus 267 r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~---~~~~~~~-~~~~~~~g~~~~~~~~g~ 342 (394)
T PRK03699 267 FFDLQRILTVLAGLALVLMYLFVNTDDPSHLLYAILGLGFFSSAIYTTIIT---LGSQQTK-VASPKLVNFILTCGTIGT 342 (394)
T ss_pred HhchhhHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHH---HHHHHcc-CCCHHHHHHHHHhhhHHH
Confidence 999999888777766666555555555555555566677766655443332 2334333 334677888888899999
Q ss_pred hHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 334 AIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 334 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
.++|.+.|++.|..|++..++..+++.+++.+.+....+.
T Consensus 343 ~i~p~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 382 (394)
T PRK03699 343 MLTFVVTSPIVAHFGLQAALLTANGLYAVVFVMCILLGFV 382 (394)
T ss_pred HHHHHHHHHHHHHhCchhhhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988888877776666555543
No 15
>KOG3764|consensus
Probab=100.00 E-value=4.4e-38 Score=275.67 Aligned_cols=351 Identities=55% Similarity=1.003 Sum_probs=318.3
Q ss_pred hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q psy14075 22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSS 101 (414)
Q Consensus 22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 101 (414)
.++.+.+++++|++++.+.+.+.+.+|+.|.+.||+|+|-.+++|..+...+++++++.++++.++++|.+||+|.++..
T Consensus 98 ~~~~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~ 177 (464)
T KOG3764|consen 98 AISLDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFAD 177 (464)
T ss_pred ccCccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHH
Confidence 35667789999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCC--C
Q psy14075 102 VSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQ--E 179 (414)
Q Consensus 102 ~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~--~ 179 (414)
++..++++|.+|++++|++++|+...+.++|.++||++||.+++..|.+.+|++.+++.++...+.++..++.+.++ .
T Consensus 178 tsglamlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~~~~~ 257 (464)
T KOG3764|consen 178 TSGLAMLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMDPDST 257 (464)
T ss_pred hhhHHHHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccCcccc
Confidence 99999999999976778999999999999999999999999999999999999999999999999999988866554 4
Q ss_pred CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh--h
Q psy14075 180 VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG--R 257 (414)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~--~ 257 (414)
++..++++++++|..+.........+.........++.+..+.+..+..+.|+.+....+...++..+.|.+.||++ |
T Consensus 258 ~~~~~~~~Ll~dP~I~~~agai~~~n~~lafLePtlslwm~e~m~~p~w~~G~~fLp~~~~y~ig~~lfg~la~k~~~~~ 337 (464)
T KOG3764|consen 258 EQGTPMWSLLMDPYILLIAGAITFSNSSLAFLEPTLSLWMLETMFTPGWEVGLAFLPASLSYAIGTNLFGKLADKYPHLR 337 (464)
T ss_pred ccCccHHHHHhCchHhhhhcchhhccchHHHhCcccHHHHHHhccCCCcceeeeecccccchhccCchHHHHHHhcCchh
Confidence 55667999999999999888888888888889999999999988877779999999999999999999999999999 5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc---chhhHHhHHHHHHHHHHh
Q psy14075 258 YLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA---VYGSVYAIGDVAFCLGFA 334 (414)
Q Consensus 258 ~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~g~~~~~~~~g~~ 334 (414)
......+++..++++...++.+++..+++..+..+++.+.....+.+...+..|..+.+ ..|..+++......+|.+
T Consensus 338 wl~~~~gl~~~G~~~~~iP~~~~~~~L~vp~~~l~~~i~~~dasl~P~l~~lvd~rh~s~~~vYGsVyaIad~a~sla~a 417 (464)
T KOG3764|consen 338 WLLSLGGLATVGVSSGPIPFATSIAQLWVPNFGLGFGIGLADASLIPTLGYLVDPRHVSGFNVYGSVYAIADAAFSLAYA 417 (464)
T ss_pred HHHHHHHHHHHHHHhchhHhhhhHHHHhhhhHHHHHHHHHHHHHHhhhhHHhcchhhccccceeeeHHHHHHHHHHHhhh
Confidence 44445566666777777888888888888888899999999999999999999887777 889999999999999999
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 335 IGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 335 ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
+||.++|.+.+..|++|...+.++..++...++..++.
T Consensus 418 ~GP~~gg~iv~~iGF~wl~~iig~~n~iyapvl~ll~~ 455 (464)
T KOG3764|consen 418 IGPTFGGSLVEAIGFEWLMTIIGILNLIYAPVLLLLRI 455 (464)
T ss_pred ccccccchheeehhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999888888887777666654
No 16
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=100.00 E-value=1.3e-36 Score=287.92 Aligned_cols=350 Identities=19% Similarity=0.148 Sum_probs=279.5
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
...|.+.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|+
T Consensus 36 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~ 115 (406)
T PRK11551 36 VAAPRMAQEFGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQAWDFPSLLVARLLTGV 115 (406)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 35688899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+...+++.|++| +++|++++++.+.+..+|..+++.+++.+.+..+||+.|++.+++.++..+......||++
T Consensus 116 ~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 194 (406)
T PRK11551 116 GLGGALPNLIALTSEAVG-PRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGVGPLLLVPLLMRWLPESR 194 (406)
T ss_pred hHHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 999999999999999999 4999999999999999999999999988888899999999988877666665555555543
Q ss_pred CCCCC-----CCc-hhhhhccC---hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhh
Q psy14075 176 VKQEV-----EPP-TLKSLVMD---PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTN 246 (414)
Q Consensus 176 ~~~~~-----~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 246 (414)
+++++ +++ ..++.+++ +..+......++..........+.|.|+++ .|.++.+.+.......++.+++++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~ 273 (406)
T PRK11551 195 AFAQAAGAGKQRAPVLRALFGEGRATATLLLWISYFFTLIVLYFLLNWLPSLLVG-QGLSRSQAGLVQIAFNIGGALGSL 273 (406)
T ss_pred hHHhccCcchhhhhhHHHHhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-CCCChhhhhHHHHHHHHHHHHHHH
Confidence 22111 111 12223332 233334444444455566677789999887 699999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHH
Q psy14075 247 LFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGD 326 (414)
Q Consensus 247 ~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 326 (414)
+.|++.||+++|+.+..+.....++++.+...++.+...+..++.|++.+...+... ....+..|++.|+++.|+.+
T Consensus 274 ~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~p~~~~g~~~g~~~ 350 (406)
T PRK11551 274 LIGALMDRLRPRRVVLLIYAGILASLAALAAAPSFAGMLLAGFAAGLFVVGGQSVLY---ALAPLFYPTQVRGTGVGAAV 350 (406)
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHhHHHHHH---HHHHHHcchhhhhhhhhHHH
Confidence 999999999999988887777777766666666655555556666666555444333 34667888999999999999
Q ss_pred HHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHh
Q psy14075 327 VAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 327 ~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~ 370 (414)
....+|..++|.+.|.+.++.+ +...+.....+.+++.+..+..
T Consensus 351 ~~~~~g~~~g~~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 395 (406)
T PRK11551 351 AVGRLGSMAGPLLAGQLLALGRSTVGVIGASIPVILVAALAALLL 395 (406)
T ss_pred HhhhHHHHHHhhhHhhhhccCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999998755 5566666666665555555444
No 17
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=100.00 E-value=2.9e-36 Score=284.85 Aligned_cols=345 Identities=19% Similarity=0.226 Sum_probs=270.3
Q ss_pred chh-hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh--------hhHHHHHH
Q psy14075 18 REN-RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG--------RTYGVLFL 88 (414)
Q Consensus 18 ~~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~~~~~l~~ 88 (414)
+|. +.+++|.|+.++|++.+++.+++.+++++.|+++||+||||++..+.++++++.+.+.++ .+++.+++
T Consensus 38 l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 117 (399)
T PRK05122 38 LPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGCALSGLLYLLAGLLAAWPVLSLLLLLL 117 (399)
T ss_pred HHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHHHHHHHHHHHhhhhhccchhHHHHHHH
Confidence 454 578899999999999999999999999999999999999999999999988877766543 25778999
Q ss_pred HHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHH
Q psy14075 89 ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQL 168 (414)
Q Consensus 89 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 168 (414)
.|+++|++.+...+...+++.|++| +|+|++++++.+....+|..+++.+++.+.++.|||+.+++.++..++..+...
T Consensus 118 ~r~l~G~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~ 196 (399)
T PRK05122 118 GRLLLGIGESLAGTGSILWGIGRVG-ALHTGRVISWNGIATYGALAIGAPLGVLLYHWGGLAGLGLLIMLLALLGLLLAR 196 (399)
T ss_pred HHHHHHhhHHhhcchHHHHHHhhcC-hhhhccchhhhhhhhhHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999 499999999999999999999999999999999999998887776554333322
Q ss_pred HhccCCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhh
Q psy14075 169 LLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLF 248 (414)
Q Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 248 (414)
..|++++ +++++.++++.+|+ .+.......+....+.....+.|.|+.+ .|.+ +.+.......++.++++++.
T Consensus 197 -~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~ 269 (399)
T PRK05122 197 -PRPAVPP-VKGERLPFRRVLGR--VWPYGMGLALASIGFGTIATFITLYYAA-RGWD--GAALALTLFGVAFVGARLLF 269 (399)
T ss_pred -cCCCCCC-CCccchhHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHHHH-cccc--cchHHHHHHHHHHHHHHHHH
Confidence 1222211 12222234444432 2222223333445555666778888776 4553 45666777888899999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHH
Q psy14075 249 GPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVA 328 (414)
Q Consensus 249 g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~ 328 (414)
+++.||+++|+.+..+..+..++.+.+...++.+...+..++.|++.+...+... ....+..|+++||++.|+.+..
T Consensus 270 g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~~~~~~~~~~~---~~~~~~~~~~~~g~~~g~~~~~ 346 (399)
T PRK05122 270 GNLINRLGGLRVAIVSLLVEILGLLLLWLAPSPWMALIGAALTGFGFSLVFPALG---VEAVKRVPPQNRGAALGAYSVF 346 (399)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHhHHHHHHHHH---HHHHHhCCHHHHHHHHHHHHHH
Confidence 9999999999988888888888877777766666666667778888776654333 3355777889999999999999
Q ss_pred HHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 329 FCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 329 ~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
.++|..++|.+.|.+.|..||+..|.+.+++.+++.+.....+++
T Consensus 347 ~~~g~~~~~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 391 (399)
T PRK05122 347 LDLSLGITGPLAGLVASWFGYPSIFLAAALAALLGLALTWLLYRR 391 (399)
T ss_pred HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 999999999999999999999999999888888877766665553
No 18
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=100.00 E-value=1.1e-36 Score=292.62 Aligned_cols=352 Identities=12% Similarity=0.037 Sum_probs=261.6
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
..|.+.+++|+|.++.+++.+.+.+++.+++++.|+++||+|||+++..+.++++++.++++++++++.+++.|++.|++
T Consensus 58 ~~~~l~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~~~l~~~r~l~G~~ 137 (476)
T PLN00028 58 LLPIIRDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSATGFIAVRFFIGFS 137 (476)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh---------hcCChhHHHHHHHHHHHHHHHH
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ---------FVGKTAPFLILSALALGDGLLQ 167 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~---------~~gw~~~f~~~~~~~~~~~~~~ 167 (414)
.+...+ ...+++|++| +++|++++++.+...++|..+++.+...+.. ..|||+.|++.+++.++..++.
T Consensus 138 ~~~~~~-~~~~i~~~~~-~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~f~i~g~l~l~~~l~~ 215 (476)
T PLN00028 138 LATFVS-CQYWMSTMFN-GKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIAFFVPGLLHIIMGILV 215 (476)
T ss_pred HHhhHH-HHHHHHHhcC-hhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHHHHHHHHHHHHHHHHH
Confidence 886544 5678999999 4999999999988877787777666544432 2489999999999988877776
Q ss_pred HHhccCCCCCC------C--CCC----chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhH
Q psy14075 168 LLLLQPGVVKQ------E--VEP----PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFL 235 (414)
Q Consensus 168 ~~~~~~~~~~~------~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 235 (414)
+++.+++++.+ + .++ ..+++.++++++|...+..++.......+..++|.|+.+.+|++..+++.+..
T Consensus 216 ~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~~a~~~~~ 295 (476)
T PLN00028 216 LTLGQDLPDGNYRELKKSGTMPKDSFSKVLRYGVTNYRTWILALTYGYSFGVELTMDNIIAEYFYDRFGLSLETAGAIAA 295 (476)
T ss_pred HHHcCcCCCCchhhHHhcCccccccHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHhHHHHHHHHhcCCCHHHHHHHHH
Confidence 66654433211 0 011 12345677888887777666666666667788999998888999999999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhH-------HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy14075 236 PASISYLIGTNLFGPLGHRMGRY-------LAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGY 308 (414)
Q Consensus 236 ~~~~~~~~~~~~~g~l~d~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 308 (414)
...++.++++++.|+++||++|| ........+.++..+.+...++.+......++.+++.+...+...+.
T Consensus 296 ~~~~~~~ig~~~~G~lsDr~~~r~~~~~r~~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--- 372 (476)
T PLN00028 296 SFGLMNLFARPAGGYLSDVAARRFGMRGRLWALWIVQTLGGVFCIWLGRANSLGAAIVVMILFSIFVQAACGATFGI--- 372 (476)
T ss_pred HHHHHHHHHHhhhHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHhhhhhccc---
Confidence 99999999999999999999865 22333333333434444444444444444555566555444333332
Q ss_pred hhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCc
Q psy14075 309 LVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPT 375 (414)
Q Consensus 309 ~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 375 (414)
..+ ..++.+|.+.|+.+...++|+.++|.+.+ ..+..+|+..|.+.+++.+++.++.++.+.+..
T Consensus 373 ~~~-~~~~~~g~~~g~~~~~g~lg~~i~~~l~~-~~~~~~y~~~f~~~~~~~~i~~~~~~~~~~~~~ 437 (476)
T PLN00028 373 VPF-VSRRSLGVISGLTGAGGNVGAVLTQLLFF-TGSSYSTETGISLMGVMIIACTLPVAFIHFPQW 437 (476)
T ss_pred Ccc-cChhhchhhhhhhhccccHHHHHHHHHHH-hcCCccHhhHHHHHHHHHHHHHHHHHheeccch
Confidence 223 23467799999987766666666665543 112345899999998888888777777764443
No 19
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=100.00 E-value=6.1e-36 Score=283.16 Aligned_cols=345 Identities=16% Similarity=0.151 Sum_probs=277.9
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
+..|.+.+++|.|+.+.++..+.+.+++.+++++.|+++||+||||++..+..+.+++.+++.++++++.+++.|+++|+
T Consensus 34 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 113 (406)
T PRK15402 34 PGMLAVVEDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTLLRFLQGI 113 (406)
T ss_pred cchHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 34678899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+...+.+.|++| +++|.+.+++......+|..++|.+++.+.++.+||+.|++.+++.++..+..++..||++
T Consensus 114 ~~~~~~~~~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (406)
T PRK15402 114 GLCFIGAVGYAAIQESFE-EADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFGLWRAMPETA 192 (406)
T ss_pred HhhhHHHHHHHHHHHHhC-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999988888999999999 4899999999999999999999999999999899999999999888877766655555543
Q ss_pred CCCCCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhh
Q psy14075 176 VKQEVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFG 249 (414)
Q Consensus 176 ~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g 249 (414)
++++++ .+++++++++|+++...+...+..........+.|.++++.+|.++.+.+.......++.+++.++.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g 272 (406)
T PRK15402 193 GRVGEKLSLKELGRDYKLVLKNRRFVAGALALGLVSLPLLAWIALSPVILISGEQLSSYEYGLLQVPVFGALIAGNLTLA 272 (406)
T ss_pred ccccccccHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322211 12346678899988877776666666666667789888888899998999888878888999999999
Q ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhH
Q psy14075 250 PLGHRMGRYLAALLGLLIIGICLMMIPLAR-----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAI 324 (414)
Q Consensus 250 ~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 324 (414)
++.||+++|+.+..+..+..++.+.+...+ +.+......++.|++.+...+...... ...+++++|++.+.
T Consensus 273 ~l~~r~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~~~~~~~----~~~~~~~~g~~~~~ 348 (406)
T PRK15402 273 RLTSRRPLRSLIRMGLWPMVAGLLLAALATVISSHAYLWLTAGLSLYAFGIGLANAGLYRLT----LFSSDVSKGTVSAA 348 (406)
T ss_pred HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHhhhHHHHH----hhhccccccHHHHH
Confidence 999999999998888887777766655432 334445566777777776654433322 22234678999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy14075 325 GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP 365 (414)
Q Consensus 325 ~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 365 (414)
.+....++..+|+.+.+.+.+..+.........+..++...
T Consensus 349 ~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 389 (406)
T PRK15402 349 MGMLSMLIFTVGIELSKHAYLGGGNGLFNLFNLANGLLWLL 389 (406)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHH
Confidence 99999999999999999999887754444344434444333
No 20
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=100.00 E-value=1.7e-36 Score=282.82 Aligned_cols=329 Identities=16% Similarity=0.206 Sum_probs=276.7
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh-----hHHHHHHHH
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR-----TYGVLFLAR 90 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-----~~~~l~~~r 90 (414)
+..|.+.++++.++.++|++.+.+.++..+++++.|+++||+||||++..+.++..++.++..+.+ +++.+++.|
T Consensus 20 ~~~~~~~~~~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (365)
T TIGR00900 20 VALPLYVLAGTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLPFVALLGGLNIWQVYVLA 99 (365)
T ss_pred HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHH
Confidence 346778899999999999999999999999999999999999999999999999999998888887 999999999
Q ss_pred HHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHh
Q psy14075 91 SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLL 170 (414)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 170 (414)
++.|++.+...+...+++.|++| +++|++++++.+....+|..++|.+++.+.++.+||+.|++.++..++..+..+..
T Consensus 100 ~l~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 178 (365)
T TIGR00900 100 GILAIAQAFFTPAYQAMLPDLVP-EEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKWAIWVDAVGFAISALLIVSV 178 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999 59999999999999999999999999999999999999999888776665555544
Q ss_pred ccCCCCC-CCCC-C--------chhhhhccChHHHHHHHHHHHHHHHHHhhh-hchHHHHHHHhCCCccchhhHhHHHHH
Q psy14075 171 LQPGVVK-QEVE-P--------PTLKSLVMDPYILIAAGAITFANTGIAMLE-PSLPIWMMDTMGADKWQQGVSFLPASI 239 (414)
Q Consensus 171 ~~~~~~~-~~~~-~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~g~~~~~~~~ 239 (414)
.+|++++ ++++ + +.+++.+|+|.++...+..++......... .+.|.|.++.+|.++.+.+.......+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (365)
T TIGR00900 179 RIPELAASEIQALSNAVLRDTREGIKFVLKNPLLRTLLLLALLFNLVFAPAIVALFPYVQSKYLGRGSTHYGWVLAAFGL 258 (365)
T ss_pred ccccCCCccccccchhHHHHHHhHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchHHHHHHHHHHHH
Confidence 3333222 1111 1 123456788888877777776666666555 788999888789999999999999999
Q ss_pred HHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh-hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075 240 SYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARN-INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY 318 (414)
Q Consensus 240 ~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (414)
+.+++.++.+++.||.+|++.+..+..+.+++...+.+.++ .+...+..++.|++.+...+... +...+..|++.|
T Consensus 259 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~ 335 (365)
T TIGR00900 259 GALLGALLLGLLGRYFKRMALMTGAIFVIGLAILVVGLTPPNFPLFLVLWFAIGVGYGPINVPQG---TLLQRRVPAELL 335 (365)
T ss_pred HHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHhhchhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCCHHHH
Confidence 99999999999999999999888887777777777666653 55566677777888777654433 346678889999
Q ss_pred hhHHhHHHHHHHHHHhHHHHHHHHHHhhhc
Q psy14075 319 GSVYAIGDVAFCLGFAIGPAMSGTLVNTIG 348 (414)
Q Consensus 319 g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g 348 (414)
+++.|+.+...+++..++|.+.|.+.|..|
T Consensus 336 g~~~~~~~~~~~~~~~~g~~~~g~l~~~~g 365 (365)
T TIGR00900 336 GRVFGAQFSLSHAAWPLGLILAGPLADHLG 365 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 999999999999999999999999998764
No 21
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=100.00 E-value=4.3e-36 Score=290.21 Aligned_cols=354 Identities=18% Similarity=0.173 Sum_probs=254.6
Q ss_pred cchhhhhhhcCCcch-HHH-----HHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHH-----
Q psy14075 17 ARENRHKYLMGETKA-VGV-----MFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGV----- 85 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~-~g~-----~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~----- 85 (414)
..|.+.++++.+.++ .++ +.++..+++.+++++.|+++||+|||+++.++.++++++++++++++|+++
T Consensus 38 ~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~~~a~~~~~~~~g~~a 117 (490)
T PRK10642 38 VAYALGKVFFPGADPSVQMIAALATFSVPFLIRPLGGLFFGMLGDKYGRQKILAITIVIMSISTFCIGLIPSYATIGIWA 117 (490)
T ss_pred HHHHHHHhhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 457777888654322 222 257788999999999999999999999999999999999999999999875
Q ss_pred ---HHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh--------hhcCChhHHH
Q psy14075 86 ---LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY--------QFVGKTAPFL 154 (414)
Q Consensus 86 ---l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~gw~~~f~ 154 (414)
+++.|+++|++.|..++...+++.|++|+ ++|+++.++.+.+..+|..+++.+...+. ..+|||+.|+
T Consensus 118 ~~~l~~~R~l~G~g~g~~~~~~~~~~~e~~p~-~~Rg~~~~~~~~~~~~G~~lg~~~~~~~~~~~~~~~~~~~gWR~~f~ 196 (490)
T PRK10642 118 PILLLLCKMAQGFSVGGEYTGASIFVAEYSPD-RKRGFMGSWLDFGSIAGFVLGAGVVVLISTIVGEANFLDWGWRIPFF 196 (490)
T ss_pred HHHHHHHHHHHHhHhHhhHHHHHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhcCccHHHHHH
Confidence 89999999999999999999999999995 99999999999988888888886665443 2579999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCC--------C--C-----CCCchhhhhccC-hHHHH-HHHHHHHHHHHHHhhhhchHH
Q psy14075 155 ILSALALGDGLLQLLLLQPGVVK--------Q--E-----VEPPTLKSLVMD-PYILI-AAGAITFANTGIAMLEPSLPI 217 (414)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~--------~--~-----~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~ 217 (414)
+.+++.++..++ ....||+++. + + +++.++++++++ ++.+. .....++....++....++|.
T Consensus 197 i~~~~~l~~~~~-~~~~~esp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 275 (490)
T PRK10642 197 IALPLGIIGLYL-RHALEETPAFQQHVDKLEQGDREGLQDGPKVSFKEIATKHWRSLLTCIGLVIATNVTYYMLLTYMPS 275 (490)
T ss_pred HHHHHHHHHHHH-HHcCCCChhHHHHHHhhhhhccccccccccCCHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 987666554333 3344443220 0 0 112234555543 23222 223334455667778889999
Q ss_pred HHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHH-HHhhh--hhhhHHHHHHHHHHHHH
Q psy14075 218 WMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICL-MMIPL--ARNINHLIVPNAGLGFA 294 (414)
Q Consensus 218 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~-~~~~~--~~~~~~~~~~~~~~g~~ 294 (414)
|+++.+|++..+.+.......++.+++.++.|+++||+|||+.+..+.++..++. ..+.. .++........++.+++
T Consensus 276 ~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 355 (490)
T PRK10642 276 YLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLAVI 355 (490)
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHH
Confidence 9988889988888877778888899999999999999999998877765443322 21222 22333444445555655
Q ss_pred HHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 295 IGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
.+...+... ....+.+|++.|+++.|+.+....+++.++|.+.+++.+..+ +...+++..+.++++.+..++.++.
T Consensus 356 ~~~~~g~~~---~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~pes 432 (490)
T PRK10642 356 LNCFTGVMA---STLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTMKET 432 (490)
T ss_pred HHHHHHHHH---HHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHhccc
Confidence 554433323 235578999999999998666677778899999999988765 5555555555666666655665554
Q ss_pred Cc
Q psy14075 374 PT 375 (414)
Q Consensus 374 ~~ 375 (414)
++
T Consensus 433 ~~ 434 (490)
T PRK10642 433 AN 434 (490)
T ss_pred cC
Confidence 33
No 22
>PRK10489 enterobactin exporter EntS; Provisional
Probab=100.00 E-value=2.9e-36 Score=286.30 Aligned_cols=350 Identities=16% Similarity=0.081 Sum_probs=278.7
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF-----GRTYGVLFLARS 91 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~ 91 (414)
..|.+.++++.++.+.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.+..+. .++++.+++.|+
T Consensus 39 ~~~~~~~~~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 118 (417)
T PRK10489 39 AVPVQIQMMTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILLARGTCGLGFIGLALNAFLPEPSLLAIYLLGL 118 (417)
T ss_pred HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEehHHHHHHHHHHHHHHHHcCCCcHHHHHHHHH
Confidence 457788899999999999999999999999999999999999999999988888877665542 567899999999
Q ss_pred HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhc
Q psy14075 92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLL 171 (414)
Q Consensus 92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 171 (414)
++|++.+...++..+++.|++| +++|+++.++.+...++|..+||.+++.+.+..+|++.|++.++..++..++.+..+
T Consensus 119 ~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 197 (417)
T PRK10489 119 WDGFFGSLGVTALLAATPALVG-RENLMQAGAITMLTVRLGSVISPALGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLP 197 (417)
T ss_pred HHHHHHHHHHHHHhhhhhhccC-HHHHHHHHHHHHHHHhHHHHhHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999888988999999999 499999999999999999999999999999989999999998887776665555443
Q ss_pred cCCCCCCCCCC------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhh
Q psy14075 172 QPGVVKQEVEP------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGT 245 (414)
Q Consensus 172 ~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 245 (414)
+++++++++++ +.++..+++|.++...+..++... ......++|.|.++.+|.++.+.+++.+...++.+++.
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~ 276 (417)
T PRK10489 198 ALPPPPQPREHPLRSLLAGFRFLLASPVVGGIALLGGLLTM-ASAVRVLYPALADEVWQMGAAQIGLLYAAVPLGAALGA 276 (417)
T ss_pred CCCCCCcccccchHHHHHHHHHHHcChHHHHHHHHHHHHHH-HHhHHHhhHHHHHhccCCChhHhHHHHHHHHHHHHHHH
Confidence 32222111111 123456678876655544443332 34567789999998889999999999999999999999
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHH
Q psy14075 246 NLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIG 325 (414)
Q Consensus 246 ~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 325 (414)
++.+++.||.++++.+..+..+..++.+.+.+.++.+...+..++.|++.+...+... +...+..|++.||+++|+.
T Consensus 277 ~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~p~~~~g~~~g~~ 353 (417)
T PRK10489 277 LTSGWLAHSARPGLLMLLSTLGSFLAVGLFGLMPMWILAVLCLALFGYLSAISSLLQY---TLLQTQTPDEMLGRINGLW 353 (417)
T ss_pred HHHHHhhhccCcchHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHHHHH---HHHHhhCCHHHHHHHHHHH
Confidence 9999999998777777788877777777776666665556666677776665533322 3456778888999999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 326 DVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 326 ~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
+...++|..+||.+.|.+.|..|+...+...+++..+..++.....
T Consensus 354 ~~~~~~g~~~g~~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 399 (417)
T PRK10489 354 TAQNVTGDAIGAALLGGLGAMMTPVASASASGFGLLIIGVLLLLVL 399 (417)
T ss_pred HHHHhhhHhHHHHHHHHHHHHhchhhHHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999988888777766666555444433
No 23
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=100.00 E-value=1.3e-35 Score=278.19 Aligned_cols=345 Identities=17% Similarity=0.165 Sum_probs=274.0
Q ss_pred hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHH-HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhh
Q psy14075 21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFT-GFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSC 99 (414)
Q Consensus 21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~-~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 99 (414)
+++++|.|+.++|++.+.+.+...+.+++.|+++||+||||.++. +.+...++.++++++++++.+++.|++.|.+.+.
T Consensus 24 l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~ 103 (375)
T TIGR00899 24 LSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAWNRNYFLLLVLGVLLSSFAST 103 (375)
T ss_pred HHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHhhhhh
Confidence 568899999999999999999999999999999999999987654 5666677788889999999999999999988888
Q ss_pred hhhhHHHHHhhcCCCcchhhHH--HHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy14075 100 SSVSGMGMLAERYPDDRERGNA--MGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVK 177 (414)
Q Consensus 100 ~~~~~~~~i~~~~~~~~~r~~~--~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 177 (414)
..|...++..|+.| +++|++. .+......++|..++|++++.+.+.++||+.|++.++..++..+..+++.||++++
T Consensus 104 ~~p~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 182 (375)
T TIGR00899 104 ANPQLFALAREHAD-RTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLTAALAFVLCGVLVWLFLPSYPRG 182 (375)
T ss_pred hHHHHHHHHHHHhh-hcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhCCCcccC
Confidence 88888888999887 4666654 68888889999999999999999999999999999998877777766655554332
Q ss_pred CC--CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075 178 QE--VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM 255 (414)
Q Consensus 178 ~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 255 (414)
++ +++.+.++.+++|+++......++..........++|.|+++++|.++.+.+..........+++.++.+++.||+
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~~r~ 262 (375)
T TIGR00899 183 APGALTRLEVRGLLASRDTRLLFVACTLMWGCNILYIINMPLLIIHELGLPDKLAGLMMGTAAGLEIPFMLLAGYLIKRF 262 (375)
T ss_pred cccccCcchhhhhhcCcchHHHHHHHHHHHHHHHHHHhhhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHh
Confidence 22 1223445567788777665555555555555667789999888899999999888877777888899999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhH
Q psy14075 256 GRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 335 (414)
++|+.+..+.....+.+..+...++.+......++.|++.+...+.... ...|..|+ +++++.++.+...++|..+
T Consensus 263 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~---~~~~~~~~-~~~~~~~~~~~~~~~g~~~ 338 (375)
T TIGR00899 263 GKRRLMLLAALAGVAFYTGLAADNSLWALLMLQLLNAIFIGILAGIGML---YFQDLMPG-RAGAATTLYTNTGRVGWII 338 (375)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhCcc-hhhHHHHHHHHHHHHHHHH
Confidence 9999888777766666555555556665556666677777766443332 34455554 4579999999999999999
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy14075 336 GPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 336 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 370 (414)
+|.+.|.+.|..|++..|.+.+++.+++.+...+.
T Consensus 339 g~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 373 (375)
T TIGR00899 339 AGSVGGILAERWSYHAVYWFAIVMLIVALFCLLLI 373 (375)
T ss_pred HHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhee
Confidence 99999999999999999999888887777665544
No 24
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=100.00 E-value=5.6e-36 Score=286.79 Aligned_cols=357 Identities=13% Similarity=0.075 Sum_probs=267.6
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh----hHHHHHHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR----TYGVLFLARSL 92 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l~~~r~l 92 (414)
..|.+.++ |.|+++.|++.+.+.+++.+++++.|+++||+|||++++.+.++.+++.+++++.+ +++.+++.|++
T Consensus 51 ~~p~l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~l 129 (452)
T PRK11273 51 AMPYLVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVLLFL 129 (452)
T ss_pred hhHHHHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHHHHH
Confidence 45677777 99999999999999999999999999999999999999999999999999888753 78889999999
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhh-hchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhc
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVL-IGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLL 171 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~-ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 171 (414)
.|++.+...+...+.+.|++|+ ++|++++++++.+.++|.. .+|+++..+....+||+.|++.+++.++..++.+++.
T Consensus 130 ~gi~~g~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l~~~~~ 208 (452)
T PRK11273 130 CGWFQGMGWPPCGRTMVHWWSQ-KERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALFAFAMM 208 (452)
T ss_pred HHHHHhccchHHHHHHHHhCCh-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHc
Confidence 9999999888888889999994 9999999999999999874 4555444444445999999999888777666666555
Q ss_pred cCCCCCC-------------------CCCCchh-----hhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075 172 QPGVVKQ-------------------EVEPPTL-----KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK 227 (414)
Q Consensus 172 ~~~~~~~-------------------~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 227 (414)
+|++++. ++++.+. +.++|+|.+|...+..++..........++|.|++++.|++.
T Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~ 288 (452)
T PRK11273 209 RDTPQSCGLPPIEEYKNDYPDDYNEKHEQELTAKQIFMQYVLPNKLLWYIAIANVFVYLLRYGILDWSPTYLKEVKHFAL 288 (452)
T ss_pred cCCHhhcCCCChhhhhhccccccccccCCCccHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 4432210 0000111 235688999888888877777777888899999999889998
Q ss_pred cchhhHhHHHHHHHHhhhhhhhhhhhhh--hhHHHH-HHHHHHHHHHHHHhhhh--hhhHHHHHHHHHHHHHHHhhhhhh
Q psy14075 228 WQQGVSFLPASISYLIGTNLFGPLGHRM--GRYLAA-LLGLLIIGICLMMIPLA--RNINHLIVPNAGLGFAIGMVDSSM 302 (414)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~-~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~ 302 (414)
.+.+.......++.+++.++.|+++||+ +||+.. .....+..++.+.+... .+.+......+..|.+... + .
T Consensus 289 ~~~~~~~~~~~~~~~~g~~~~G~l~dr~~~~r~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~-~ 365 (452)
T PRK11273 289 DKSSWAYFLYEYAGIPGTLLCGWMSDKVFRGNRGATGVFFMTLVTIATIVYWLNPAGNPTVDMACMIVIGFLIYG--P-V 365 (452)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHHHHHhcccChHHHHHHHHHHHHHHHh--H-H
Confidence 8999888888999999999999999998 444322 22223333333332222 1222222333333332211 1 1
Q ss_pred hhhhhhhhhcccccchhhHHhHHHHHHHHHHhH-HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCchhh
Q psy14075 303 MPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI-GPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKEE 378 (414)
Q Consensus 303 ~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 378 (414)
........|..|++.+|++.|+.+...++|+.+ +|.+.|.+.|+.||+..|.+++++++++++....+.+.++|++
T Consensus 366 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 442 (452)
T PRK11273 366 MLIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIGEKRHH 442 (452)
T ss_pred HHHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHhccccchH
Confidence 112223568889999999999999988898765 7999999999999999999888888887777666655544443
No 25
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=100.00 E-value=7.9e-37 Score=292.27 Aligned_cols=347 Identities=18% Similarity=0.263 Sum_probs=277.1
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHH-HHHHH
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFL-ARSLQ 93 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~-~r~l~ 93 (414)
....|++.+++|.+.++.+++.+.+.++..++.++.|+++||+|||++++.+.++.+++.++++++++++.+++ .|+++
T Consensus 39 ~~~~~~i~~~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~ 118 (455)
T TIGR00892 39 TVFFKELQQIFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGFIT 118 (455)
T ss_pred hhhHHHHHHHhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34568899999999999999999999999999999999999999999999999999999999999999998875 56999
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQP 173 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 173 (414)
|++.+...+...+++.++++ ++|++++++.+.+..+|..++|++++.+.+.+|||++|++.+++.++..+..++..++
T Consensus 119 G~~~~~~~~~~~~~~~~~~~--~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~~~~~ 196 (455)
T TIGR00892 119 GLGLAFNFQPSLTMLGKYFY--RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGALMRPV 196 (455)
T ss_pred HhcchhhhhHHHHHHHHHHH--hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 99999877777888899985 6899999999999999999999999999999999999999999887665555444432
Q ss_pred CCC-----C---C----C-C-CC-------chh-----hhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075 174 GVV-----K---Q----E-V-EP-------PTL-----KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK 227 (414)
Q Consensus 174 ~~~-----~---~----~-~-~~-------~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 227 (414)
++. + + + . ++ .+. .+++++|.++......++....+.....++|.|.++ .|++.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~-~g~s~ 275 (455)
T TIGR00892 197 GPSQRVSKSKSKEGLPPDGSTKKLSKKSTAEKINRFLDFSLFTHRGFLVYLSGNVIMFLGFFAPIIFLVPYAKD-KGVDE 275 (455)
T ss_pred CcccccccccccccCCCCCccccccccchhhhhhhhcchHHhcCchHHHHHHHHHHHHHHccchHHHHHHHHHH-cCCCH
Confidence 110 0 0 0 0 00 000 146788888887777777777777778889999877 69999
Q ss_pred cchhhHhHHHHHHHHhhhhhhhhhhhhh--hhHHHHH--HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075 228 WQQGVSFLPASISYLIGTNLFGPLGHRM--GRYLAAL--LGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMM 303 (414)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~--~~~~~~~--~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 303 (414)
.+++...++.+++.++++++.+++.||. ++++... .+..+.++++++....++.+.+.+..++.|++.+...+...
T Consensus 276 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~~~~~~~i~~~~~G~~~g~~~~~~~ 355 (455)
T TIGR00892 276 YEAAFLLSIIGFVDIFARPSCGLIAGLKWIRPHVQYLFSFALLFNGLTHLLCALAGDYTGLVIYCIFFGLSFGSVGALLF 355 (455)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccCHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHhchHHHHHH
Confidence 9999999999999999999999999973 3333232 23344444444555566666667777888888776655444
Q ss_pred hhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHH
Q psy14075 304 PELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLL 367 (414)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~ 367 (414)
+ ...+..|+++++++.|+.+...++|..+||.+.|.+.|..| |+..|++.+++.+++.+..
T Consensus 356 ~---~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~l~~~~g~~~~~f~~~~~~~li~~~~~ 417 (455)
T TIGR00892 356 E---VLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGRLVDATKNYKYIFYASGSIVVSAGLFL 417 (455)
T ss_pred H---HHHHHhhHHHHhhHHhHHHHHHHHHHHccccceeeeehhcCCcchHHHHhhHHHHHHHHHH
Confidence 3 35567778889999999999999999999999999999885 9999988887766665543
No 26
>PRK10504 putative transporter; Provisional
Probab=100.00 E-value=1.3e-35 Score=286.35 Aligned_cols=331 Identities=19% Similarity=0.213 Sum_probs=273.4
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
...|.+.+++|.++.+.+++.+.+.++..++.+++|+++||+||||+++.+.++.+++.+++.++++++.+++.|+++|+
T Consensus 31 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~ 110 (471)
T PRK10504 31 TALPSMAQSLGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLGSLFCALSGTLNELLLARVLQGV 110 (471)
T ss_pred HHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 35688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+...+++.|++| +++|++++++.....++|..++|.+++.+.++.|||+.|++......+..+......|+.+
T Consensus 111 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~~f~~~~~~~~l~~~~~~~~~~~~~ 189 (471)
T PRK10504 111 GGAMMVPVGRLTVMKIVP-REQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHWIFLINIPVGIIGAIATLMLMPNYT 189 (471)
T ss_pred hhHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHhCCCcc
Confidence 999999999999999999 5999999999999999999999999999999999999999988877776666655544332
Q ss_pred CCCCC-----------------------C--------------------------------CchhhhhccChHHHHHHHH
Q psy14075 176 VKQEV-----------------------E--------------------------------PPTLKSLVMDPYILIAAGA 200 (414)
Q Consensus 176 ~~~~~-----------------------~--------------------------------~~~~~~~~~~~~~~~~~~~ 200 (414)
.+..+ + +....+++|||.++.....
T Consensus 190 ~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~ 269 (471)
T PRK10504 190 MQTRRFDLSGFLLLAVGMATLTLALDGSKGLGLSPLAIAGLVAVGVVALLLYLLHARNNNRALFSLKLFRTRTFSLGLAG 269 (471)
T ss_pred ccCCCCChHHHHHHHHHHHHHHHHHhcCCcCCcchHHHHHHHHHHHHHHHHHHHHHhcCCCCccCHHHhcccchHHHHHH
Confidence 11100 0 0001246788888888777
Q ss_pred HHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh--
Q psy14075 201 ITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA-- 278 (414)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~-- 278 (414)
.++..........+.|.|+++..|.++.+.++......++.+++.++.+++.||+++|+.+..+..+..+..+++.+.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~ 349 (471)
T PRK10504 270 SFAGRIGSGMLPFMTPVFLQIGLGFSPFHAGLMMIPMVLGSMGMKRIVVQVVNRFGYRRVLVATTLGLALVSLLFMLVAL 349 (471)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHhccc
Confidence 777777777777889999988889999999999998899999999999999999999999988888777765555443
Q ss_pred -hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchH
Q psy14075 279 -RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFE 350 (414)
Q Consensus 279 -~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~ 350 (414)
++.+......++.|++.+...+.... ...+..|++.+|.++|+.++...+|..+|+.+.|.+.+..|+.
T Consensus 350 ~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~ll~~~g~~ 419 (471)
T PRK10504 350 LGWYYLLPFVLFLQGMVNSTRFSSMNT---LTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAGLLLGLFGQQ 419 (471)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHH---HHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 22222233455566666666544443 3456777888999999999999999999999999999887764
No 27
>PRK12307 putative sialic acid transporter; Provisional
Probab=100.00 E-value=5.7e-36 Score=285.36 Aligned_cols=336 Identities=15% Similarity=0.086 Sum_probs=257.0
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
..|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+++.++.++.+++.++++++++++.+++.|+++|++
T Consensus 40 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~g 119 (426)
T PRK12307 40 IMYLIKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTGLSGLASGVIMLTLSRFIVGMG 119 (426)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV 176 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 176 (414)
.+..++....++.|++| +|+|++++++...+.++|.++++.+.+.+.+..+||+.|++..+..++... .....|++++
T Consensus 120 ~g~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f~i~~~~~~~~~~-~~~~~p~~~~ 197 (426)
T PRK12307 120 MAGEYACASTYAVESWP-KHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAFFVGLLPVLLVIY-IRARAPESKE 197 (426)
T ss_pred HhhHHHHHHHHHHHhCC-HhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHHHHHHHHHHHHHH-HHHHCCCChH
Confidence 99999999999999999 499999999999999999999999999998889999999886544333222 2222222211
Q ss_pred C------CCCC---------CchhhhhccChHHHHHHHHHH---HHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHH
Q psy14075 177 K------QEVE---------PPTLKSLVMDPYILIAAGAIT---FANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPAS 238 (414)
Q Consensus 177 ~------~~~~---------~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~ 238 (414)
. .+++ ..++++++|+|.++....... +..........++|.|+++ .|.++.+.+.......
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~ 276 (426)
T PRK12307 198 WEEAKLSGKGKHSQSAWSVFSLSMKGLFNRAQFPLTLCVFIVLFSIFGANWPIFGLLPTYLAG-EGFDTGVVSNLMTAAA 276 (426)
T ss_pred HHHhhhhccccccccchhhhhHHHHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHH
Confidence 0 0000 014567778877664433222 2222333456788999887 5999888999989999
Q ss_pred HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHh--hhhhhhhhhhhhhhccccc
Q psy14075 239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGM--VDSSMMPELGYLVDIRHTA 316 (414)
Q Consensus 239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~~~~~~~~~~~~~~ 316 (414)
++.++++++.+++.||++||+....+.++..+..+.+...++........++++.+... ..+..+ ....|..|++
T Consensus 277 ~~~~~g~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~p~~ 353 (426)
T PRK12307 277 FGTVLGNIVWGLCADRIGLKKTFSIGLLMSFLFIFPLFRIPQDNYLLLGACLFGLMATNVGVGGLVP---KFLYDYFPLE 353 (426)
T ss_pred HHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHhcccHhHHHH---HHHHHhCcHH
Confidence 99999999999999999999988888777666554443332222222223333333221 111112 2356888999
Q ss_pred chhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHH
Q psy14075 317 VYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAI 358 (414)
Q Consensus 317 ~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~ 358 (414)
.||++.|+.+...++++.++|.+.|++.+..|+.....+...
T Consensus 354 ~~g~~~g~~~~~~~~~~~~gp~~~g~l~~~~g~~~~~~~~~~ 395 (426)
T PRK12307 354 VRGLGTGLIYNLAATSGTFNSMAATWLGITMGLGAALTFIVA 395 (426)
T ss_pred HHhhhhhHHHHHHhHHHHHHHHHHHHHHHcccHHHHHHHHHH
Confidence 999999999999999999999999999999997655444333
No 28
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=100.00 E-value=4.2e-35 Score=276.19 Aligned_cols=338 Identities=14% Similarity=0.156 Sum_probs=263.0
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
...|.+.+++|.|+.+.++..+.+.++..+++++.|+++||+|||+.+..+.++.+++.+++.++++++.+++.|+++|+
T Consensus 24 ~~lp~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~ 103 (392)
T PRK10473 24 VGLPRIAADLNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIASLLCSLAETSSLFLAGRFLQGI 103 (392)
T ss_pred hhHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHh
Confidence 46789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+...+++.|++| +++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+......+|++
T Consensus 104 ~~~~~~~~~~~~i~~~~~-~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 182 (392)
T PRK10473 104 GAGCCYVVAFAILRDTLD-DRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQSLFYTMAAMGILVLLLSLFILKETR 182 (392)
T ss_pred hhhHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 999999999999999999 4999999999999999999999999999888899999999999888877776666655543
Q ss_pred CCCCCC----CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhh
Q psy14075 176 VKQEVE----PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL 251 (414)
Q Consensus 176 ~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l 251 (414)
++++++ .++.++.+|+|+++...+...+.......+..+.|.++++.+|+++.+.+......+++.+++.++.+++
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~i~~~~~~~~l 262 (392)
T PRK10473 183 PARAPAASSKPRENSESLLNRFFLSRLVITTLSVTVILTFVNTSPVLLMEQMGFSRGEYAIIMALTAGVSMTVSFSTPFA 262 (392)
T ss_pred CcccCCccchHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322211 1234567788887765555544444445566677888888889999999999999999999999999999
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHH
Q psy14075 252 GHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCL 331 (414)
Q Consensus 252 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 331 (414)
.||+++|+.+..+..+..++.+.+...++.+.......+.+.+.+...+... ..+..|.++++ |.......+
T Consensus 263 ~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~~~~~-----~~~~~~~~~~~---g~~~~~~~~ 334 (392)
T PRK10473 263 LGIFKPRTLMLTSQVLFLAAGITLALSPSHAVSLFGITLICAGFSVGFGVAM-----SQALGPFSLRA---GVASSTLGI 334 (392)
T ss_pred HHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHH-----HHHhccCcccc---cHHHHHHHH
Confidence 9999999999888888877777666655444334444444444444332211 11222333332 333445567
Q ss_pred HHhHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy14075 332 GFAIGPAMSGTLVNTIGFEWMLFIIAILDFM 362 (414)
Q Consensus 332 g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~ 362 (414)
+..+++.+.+++.+..|+.......+...+.
T Consensus 335 ~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~ 365 (392)
T PRK10473 335 AQVCGSSLWIWLAAVLGISAWNMLIGILIAC 365 (392)
T ss_pred HHHHHHHHHHHHHHHhccchhHHHHHHHHHH
Confidence 8888888888888888876555444443333
No 29
>PRK03633 putative MFS family transporter protein; Provisional
Probab=100.00 E-value=2.2e-35 Score=276.88 Aligned_cols=343 Identities=14% Similarity=0.144 Sum_probs=264.2
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
+..|.+.+++|.|+.++|++.+.+.+++.+++++.|+++||+||||++..+.++.+++.+++++++|++.+++.|+++|+
T Consensus 27 ~~lp~~~~~~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~ 106 (381)
T PRK03633 27 TLVPLWLAQEHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAAGCAGLGLMVGFWSWLAWRFVAGI 106 (381)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+...+.+.+..++ ++|+++++......++|..+||.+++.+.+...|...+. .+..........+...+++
T Consensus 107 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~- 183 (381)
T PRK03633 107 GCAMIWVVVESALMCSGTS-RNRGRLLAAYMMVYYLGTVLGQLLVSKVSTELMSVLPWV-TGLVLAAILPLLFTRILNQ- 183 (381)
T ss_pred HHHHHHHHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccchHHHH-HHHHHHHHHHHHHhcccCC-
Confidence 9999988888888888884 899999999999999999999999999877544443333 2222222222222122222
Q ss_pred CCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075 176 VKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM 255 (414)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 255 (414)
++++++..+.++.+|+|.++......+.....+.....++|.|+++ .|.++.+.+.......++.+++++..+++.||+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~ 262 (381)
T PRK03633 184 QAENHDSTSIWPMLKLRQARLGVNGCIISGIVLGSLYGLMPLYLNH-QGMSDASIGFWMALLVSAGILGQWPIGRLADRF 262 (381)
T ss_pred CCCCCCCCCHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhhhHHHHHHc
Confidence 2222223455677888887765544444445556667789999887 599988999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhH
Q psy14075 256 GRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI 335 (414)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i 335 (414)
++|+.+..+.....++.+.+. .. ........+.|++.....+. ..+...|..|+++++...+..+...++|..+
T Consensus 263 ~~~~~l~~~~~~~~~~~~~~~--~~-~~~~~~~~l~g~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~i 336 (381)
T PRK03633 263 GRLLVLRVQVFVVILGSIAML--SQ-AAMAPALFILGAAGFTLYPV---AMAWACEKVEHHELVAMNQALLLSYTVGSLL 336 (381)
T ss_pred CcHHHHHHHHHHHHHHHHHHh--hh-HHHHHHHHHHHHHHHhHHHH---HHHHHHccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 999988888777777655443 11 22223444555554444333 3344567777777788888888889999999
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy14075 336 GPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 336 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 368 (414)
||.+.|++.|++|+++.|.+.+.+.++..+..+
T Consensus 337 gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~ 369 (381)
T PRK03633 337 GPSFTAMLMQNYSDNLLFIMIASVSFIYLLMLL 369 (381)
T ss_pred HHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999988777766544443
No 30
>PRK12382 putative transporter; Provisional
Probab=100.00 E-value=3.6e-35 Score=276.70 Aligned_cols=340 Identities=17% Similarity=0.198 Sum_probs=262.6
Q ss_pred hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH---h-----hhhHHHHHHHHHH
Q psy14075 21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---F-----GRTYGVLFLARSL 92 (414)
Q Consensus 21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-----~~~~~~l~~~r~l 92 (414)
+.+|+|.|++++|++.+++.+++.++++++|+++||+||||++..+.+...++.+... + .++++.+++.|++
T Consensus 42 l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 121 (392)
T PRK12382 42 VHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACGLAGLAYLLAAILPVSAPFKFALLVVGRLI 121 (392)
T ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHHHHHHHHHhhhccccchhHHHHHHHHHHHH
Confidence 5789999999999999999999999999999999999999999999888777654332 1 3588999999999
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
+|++.+...+...+++.|++|+ |+|++++++.+.+.+.|..++|++++.+.+++|||+.+.+..+..++...... ..|
T Consensus 122 ~G~~~~~~~~~~~~~~~~~~~~-~~r~~a~~~~~~~~~~g~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~-~~~ 199 (392)
T PRK12382 122 LGFGESQLLTGALTWGLGLVGP-KHSGKVMSWNGMAMYGALAAGAPLGLLLHSHFGFAALALTTMVLPLLAWAFNG-TVR 199 (392)
T ss_pred HHHHHHHHHHHHHHHHHhhCCc-cccchhhhHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHH-hcc
Confidence 9999999999888999999994 99999999999999999999999999999989999887766655444333222 222
Q ss_pred CCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhh
Q psy14075 173 PGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG 252 (414)
Q Consensus 173 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 252 (414)
+++++ ++++.+.++..| .++...+...+..........+.|.|+++ .|.+ +.+.......++.++++++.|++.
T Consensus 200 ~~~~~-~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~l~ 273 (392)
T PRK12382 200 KVPAH-AGERPSLWSVVG--LIWKPGLGLALQGVGFAVIGTFVSLYFAS-KGWA--MAGFTLTAFGGAFVLMRVLFGWMP 273 (392)
T ss_pred CCCCC-cccCchHHHHHH--HHHHhHHHHHHHHHHHhHHHHHHHHHHHh-cCCc--hhHHHHHHHHHHHHHHHHHHHHHH
Confidence 22111 112223333332 22222222333344455566778888876 4654 356666677888889999999999
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHH
Q psy14075 253 HRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLG 332 (414)
Q Consensus 253 d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 332 (414)
||+++|+.+..+..+..++.+.+...++.+......++.|++.+...+... ....+..|+++||++.|+.+...++|
T Consensus 274 ~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~g 350 (392)
T PRK12382 274 DRFGGVKVAIVSLLVETVGLLLLWLAPTAWVALAGAALTGAGCSLIFPALG---VEVVKRVPSQVRGTALGGYAAFQDIA 350 (392)
T ss_pred HhcCCCeehHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHhHHHHHH---HHHHHhcCHHHHHHHHHHHHHHHHHH
Confidence 999999998888888888877776666666666666777777776544333 34567788899999999999999999
Q ss_pred HhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 333 FAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 333 ~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
..++|.+.|.+.|+.||+..|.+.+.+.+++.++.+...
T Consensus 351 ~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 389 (392)
T PRK12382 351 YGVSGPLAGMLATSFGYPSVFLAGAISAVLGIIVTILSF 389 (392)
T ss_pred HHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999888888777665443
No 31
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=100.00 E-value=7.5e-35 Score=275.02 Aligned_cols=347 Identities=14% Similarity=0.192 Sum_probs=267.8
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH---h-hhhHHHHHHHHHHH
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---F-GRTYGVLFLARSLQ 93 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~-~~~~~~l~~~r~l~ 93 (414)
.|++.+|+|.|+++.|++.+.+.+++.+++++.|+++||+||||++..+.++.+++.+++. + .++++.+++.|++.
T Consensus 36 ~~~~~~~~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~ 115 (402)
T TIGR00897 36 LSPFLKALGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVGHAAFIVFGLGHANYPLILLFYGIR 115 (402)
T ss_pred HHHHHHHhCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHH
Confidence 4667789999999999999999999999999999999999999999999999998877653 3 35888999999999
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhh-hhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGV-LIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~-~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
|++.+...+...+.+.+++|+ ++|++++|+.+...++|. .++|++++.+.+..||+..++......++..++.+++.+
T Consensus 116 G~g~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 194 (402)
T TIGR00897 116 GLGYPLFAYSFLVWVVYNTKQ-DNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPAFGEMNTLWSALAFVLTGGVIALFSNK 194 (402)
T ss_pred HcchHHHHhHHHHHHHHhCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHhccC
Confidence 999988888888889999995 999999999999999997 689999999998889776666554444443344444333
Q ss_pred CCCCC--CC--CCC----chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhh
Q psy14075 173 PGVVK--QE--VEP----PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIG 244 (414)
Q Consensus 173 ~~~~~--~~--~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 244 (414)
+++++ ++ .+. +++++++|+|+++...+..++.........++.|.|+++ +|.++.+.+.......++..++
T Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~ig 273 (402)
T TIGR00897 195 DIFTPQHMQTREKFSELGKAATILFTNPNVLLGGMVRIINTIGLFGFAVFLPMFVAE-LGFSTSEWLQIWGTFFFTNIVF 273 (402)
T ss_pred CCCCcccccCCcchhhHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCChhHHHHHHHHHHHHHHHH
Confidence 32111 11 111 124457889999888777777777778888899999866 7999999999888899999999
Q ss_pred hhhhhhhhhhhhhHHHHH-HHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075 245 TNLFGPLGHRMGRYLAAL-LGLLIIGICLMMIPL-----ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY 318 (414)
Q Consensus 245 ~~~~g~l~d~~~~~~~~~-~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (414)
++..|+++||++||+... .+.....++.+.+.. .++.+...+..++.|++.+...+ ......+. ++++|
T Consensus 274 ~~~~g~l~dr~~~~~~~~~~~~l~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~----~~~~~~~~-~~~~~ 348 (402)
T TIGR00897 274 NVIFGIVGDKLGWMNTVRWFGGVGCGIFTLALYYIPQHFGHSFAVALIIAIALGIFLAGYVP----LAAVFPTL-APKHK 348 (402)
T ss_pred HHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHHHccCCcHHHHHHHHHHHHHHHHHHHH----HHHHHHhh-Ccchh
Confidence 999999999999887653 333333333222221 12344445566666766665422 22223343 45678
Q ss_pred hhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 319 GSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 319 g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
|++.|+.+....+++.++|.+.|.+.|..|+...+++.+++.+++.++..+.|
T Consensus 349 g~~~g~~~~~~~lg~~~gp~i~g~l~~~~g~~~~~~~~a~~~~i~~~~~~~~~ 401 (402)
T TIGR00897 349 GAAMSVLNLSAGLSAFLAPAIAVLFIGFFGAIGVVWIFAALYVVSAFLTAFIR 401 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999888888777766654
No 32
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=100.00 E-value=2.2e-35 Score=286.11 Aligned_cols=328 Identities=17% Similarity=0.232 Sum_probs=278.2
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
...|.+.+++|.++.+.+++.+.+.++..++.++.|+++||+|||++++.+.++++++.+++++++|++.+++.|+++|+
T Consensus 23 ~~~p~~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~G~ 102 (485)
T TIGR00711 23 VAIPTIAGDLGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLLCGVAPNLELMIIFRVIQGF 102 (485)
T ss_pred HHHHHHHHhcCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHh
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+...+++.|++|+ ++|++++++......+|..++|.+++++.++.+||+.|++.+.+.++..++..+..|+++
T Consensus 103 ~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~~~~~~~~~~~~~~~~~~~~~~ 181 (485)
T TIGR00711 103 GGGPLIPLSFSTLLNIYPP-EKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFLINVPIGIIVVVVAFFILPRDK 181 (485)
T ss_pred hhhhHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhhhhhHHHHHHHHHHHHHcCCcc
Confidence 9999999999999999994 999999999999999999999999999999999999999998888777766666555432
Q ss_pred CCCCCC------------------------Cc---------------------------------hhhhhccChHHHHHH
Q psy14075 176 VKQEVE------------------------PP---------------------------------TLKSLVMDPYILIAA 198 (414)
Q Consensus 176 ~~~~~~------------------------~~---------------------------------~~~~~~~~~~~~~~~ 198 (414)
++++++ +. ...+.+|+|+++...
T Consensus 182 ~~~~~~~d~~g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 261 (485)
T TIGR00711 182 PAASENFDFLGLLLLSVGLGSLLYGLSEGPERGWFDSNEILILSITGLVAIIAFVVWELTDDNPLVDLRLFKYRNFTIGC 261 (485)
T ss_pred ccccCCCcHHHHHHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHcCCCCccCHHHHcCCChHHHH
Confidence 221110 00 012356777777777
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh-
Q psy14075 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL- 277 (414)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~- 277 (414)
+..++..........++|.|+++.+|.++.+.++......++.+++.++.|++.||++||+.+..+..+.+++...+.+
T Consensus 262 ~~~~~~~~~~~~~~~~~p~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~g~~~~~~~~~~~~~~ 341 (485)
T TIGR00711 262 VYMSLLGLGLYGSFYLLPLYLQQVLGYTALQAGLHILPVGLAPMLSSPIAGRMGDKIDPRKLVTIGLILYAVGFYWRAFT 341 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHHhcc
Confidence 7777777777888889999999999999999999999999999999999999999999999988888888887776652
Q ss_pred -h--hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075 278 -A--RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI 347 (414)
Q Consensus 278 -~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~ 347 (414)
. .+.+......++.|++.+...+... ....+..|++++|++.|+.+..+.+|+.+|+.+.|.+.++.
T Consensus 342 ~~~~~~~~~~~~~~~l~g~g~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g~~~~~~ 411 (485)
T TIGR00711 342 FTPDTPFLAIALPQFIRGFGMGCFFMPLT---TIALSGLPPHKIARGSSLSNFTRQLGGSIGTALITTILTNR 411 (485)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHHHHHHH---HHHHhcCCHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 2334455566778888877644333 33456678899999999999999999999999999998753
No 33
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=100.00 E-value=5.6e-35 Score=276.19 Aligned_cols=342 Identities=15% Similarity=0.160 Sum_probs=264.0
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 94 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (414)
.+.+|.+.++++.+.++.++..+.+.+++.++++++|+++||+|||+++..+.++++++.+++++++|++.++++|+++|
T Consensus 36 ~p~l~~i~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~~~r~l~G 115 (413)
T PRK15403 36 QPGIINVVRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFLIARFIQG 115 (413)
T ss_pred ccCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44668899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPG 174 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 174 (414)
++.+...+...+++.|++| +++|++++++......+|..+||.+++.+.++.|||+.|++.++..++..+..++..||+
T Consensus 116 i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~~~~~~lp~~ 194 (413)
T PRK15403 116 TSICFIATVGYVTVQEAFG-QTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFVGLLLAMPET 194 (413)
T ss_pred HHHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 9998777777888999999 489999999999999999999999999999989999999999998888766655555554
Q ss_pred CCCCCCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhh
Q psy14075 175 VVKQEVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLF 248 (414)
Q Consensus 175 ~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 248 (414)
+++++++ .+++++++|||+++...+...+.......+..+.|.++++.+|.++.+.++.......+..++..+.
T Consensus 195 ~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~P~~l~~~~g~s~~~~gl~~~~~~~~~~i~~~l~ 274 (413)
T PRK15403 195 VKRGAVPFSAKSVLRDFRNVFRNRLFLTGAATLSLSYIPMMSWVAVSPVILIDAGGMTTSQFAWTQVPVFGAVIVANAIV 274 (413)
T ss_pred ccccCCCCChHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHhChHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3322211 1245678899999988888777777777888889999999889999999998888888888888888
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHh
Q psy14075 249 GPLGHRMGRYLAALLGLLIIGICLMMIPL-----ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYA 323 (414)
Q Consensus 249 g~l~d~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 323 (414)
+++.+|..+++.......+..++.+++.. .++.+......++.+++.+...+..... +.... ...+|++.+
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~ig~~l~~~~~~~~~~~~~~~~~~~~l~~~G~~~~~p~~~~~-al~~~---~~~~G~a~a 350 (413)
T PRK15403 275 ARFVKDPTEPRFIWRAVPIQLVGLALLIVGNLLWPHVWLWSVLGTSLYAFGIGLIFPTLFRF-TLFSN---NLPKGTVSA 350 (413)
T ss_pred HHHhccCCchhHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHhHHHHHH-HhccC---CCCCcHHHH
Confidence 77765444333332222222222222211 1222223456666777777765544432 11112 223599999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy14075 324 IGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFM 362 (414)
Q Consensus 324 ~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~ 362 (414)
+.+.....+...++...|++.+. +-...|...+++..+
T Consensus 351 ~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~ 388 (413)
T PRK15403 351 SLNMVILMVMAVSVEIGRWLWFN-GGRLPFHLLAVVAGV 388 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHc-CCchHHHHHHHHHHH
Confidence 99999999999999999988776 555566555544443
No 34
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=100.00 E-value=8.8e-36 Score=286.94 Aligned_cols=342 Identities=14% Similarity=0.182 Sum_probs=265.4
Q ss_pred hhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhhhh
Q psy14075 24 YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG--RTYGVLFLARSLQGIGSSCSS 101 (414)
Q Consensus 24 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~ 101 (414)
|++++..+.|++.+.+.+++.+++++.|+++||+|||+++..+.++++++.+++.++ .+++.+++.|+++|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 789999999999999999999999999999999999999999999999998887554 568899999999999999999
Q ss_pred hhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-CChhHHHHHHHHHHHHHHHHHHhccCCCCCCC-
Q psy14075 102 VSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGLLQLLLLQPGVVKQE- 179 (414)
Q Consensus 102 ~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~- 179 (414)
+....+++|++|+ ++|++++++...+..+|..+++++++.+.+.. +||+.|++.++..++..++.+.+.++++++++
T Consensus 150 ~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~~~p~~~~~ 228 (465)
T TIGR00894 150 PATHKIIVKWAPP-KERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPADDPSIHPC 228 (465)
T ss_pred hhHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhcCCcccCCC
Confidence 9999999999994 99999999999999999999999999999884 99999999999888877776666554332110
Q ss_pred --------------------CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHH
Q psy14075 180 --------------------VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASI 239 (414)
Q Consensus 180 --------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~ 239 (414)
+++.++++++++|.+|...+..++.......+.+|+|.|+++.+|.+..+.++..+...+
T Consensus 229 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~g~~~~~~~~ 308 (465)
T TIGR00894 229 ISKFEKKYINSSLQGQKGSTRQSLPIKAIPKSLPVWAIWFAIFGHFWLYTILPTYLPTFISWVLRVSGKENGLLSSLPYL 308 (465)
T ss_pred CCHHHHHHHHhhcccccCCCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHHhHHHHHHHHH
Confidence 011246778899999999998888888888899999999999999999999999999999
Q ss_pred HHHhhhhhhhhhhhhhhhHHH--------HHHHHHHH--HHHHHHhhh-hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy14075 240 SYLIGTNLFGPLGHRMGRYLA--------ALLGLLII--GICLMMIPL-ARNINHLIVPNAGLGFAIGMVDSSMMPELGY 308 (414)
Q Consensus 240 ~~~~~~~~~g~l~d~~~~~~~--------~~~~~~~~--~i~~~~~~~-~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 308 (414)
+..++.++.|+++||+++|+. +..+.... .+..+.... ..+.........+.+.+.+...+... ..
T Consensus 309 ~~~i~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~---~~ 385 (465)
T TIGR00894 309 FAWLCSIFAGYLADFLKSSKTLSLTAARKIFNGIGGLGPGIFAYALPYLSAAFYLTIIILTLANAVSSGPLAGVL---IN 385 (465)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhhhhhhhhh---hc
Confidence 999999999999999764321 11111111 111111111 12222222333333333332222211 12
Q ss_pred hhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh--c-hHHHHHHHHHHHHHHHHHHHHh
Q psy14075 309 LVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI--G-FEWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 309 ~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~--g-~~~~~~~~~~~~~~~~~~~~~~ 370 (414)
..+..| +.+|.+.|+.+....+++.++|.+.|.+.+.. + |...|.+.++..+++.++....
T Consensus 386 ~~~~~~-~~~g~~~g~~~~~~~l~~~i~p~l~g~~~~~~~~~~~~~~f~~~~~~~~i~~i~~~~~ 449 (465)
T TIGR00894 386 SLDLAP-RFLGFIKGITGLPGFIGGLIASTLAGNILSQDSKNVWLIVFLIMAFVNILCVIFYLIF 449 (465)
T ss_pred hhhcCh-hHHHHHHHHHHHHHHHHHHHHHHhhheeeCCCCchHHHHHHHHHHHHHHHHHHHeeee
Confidence 334444 47899999999999999999999999988753 3 7888888887777776655443
No 35
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=100.00 E-value=4.5e-35 Score=279.03 Aligned_cols=349 Identities=15% Similarity=0.111 Sum_probs=248.0
Q ss_pred cchhhhhhhc---CCcchHHHH---HHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHH------
Q psy14075 17 ARENRHKYLM---GETKAVGVM---FGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG------ 84 (414)
Q Consensus 17 ~~~~~~~~~g---~s~~~~g~~---~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~------ 84 (414)
..|.+.++++ .+..+.+.. .+...++..++++++|+++||+||||++..+.++++++++++++++++.
T Consensus 44 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 123 (432)
T PRK10406 44 CSLYFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSLVIACLPGYETIGTWA 123 (432)
T ss_pred HHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHhhcCCchhHHHHH
Confidence 3467778884 455544444 4444555559999999999999999999999999999999999988864
Q ss_pred --HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh--------hhcCChhHHH
Q psy14075 85 --VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY--------QFVGKTAPFL 154 (414)
Q Consensus 85 --~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~gw~~~f~ 154 (414)
.+++.|+++|++.|..++...++++|++|+ ++|+++.++.+.+...|..+++.+...+. +.+|||++|+
T Consensus 124 ~~~l~~~R~l~G~g~g~~~~~~~~~i~e~~p~-~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~F~ 202 (432)
T PRK10406 124 PALLLLARLFQGLSVGGEYGTSATYMSEVAVE-GRKGFYASFQYVTLIGGQLLALLVVVVLQQTLEDAELREWGWRIPFA 202 (432)
T ss_pred HHHHHHHHHHHHhhhhhhHhhHHHHHHHhCCC-CcccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHHH
Confidence 589999999999999999999999999995 99999999999998889888887765543 2579999999
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCC---CCCCchhhhhccChHHHHHHHHHHH-HHHHHHhhhhchHHHHHHHhCCCccch
Q psy14075 155 ILSALALGDGLLQLLLLQPGVVKQ---EVEPPTLKSLVMDPYILIAAGAITF-ANTGIAMLEPSLPIWMMDTMGADKWQQ 230 (414)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~ 230 (414)
+.+++.++.... ....||+++.+ +++..++++++|+|+.+...+...+ ....++.+..|+|.|+++.+|.+..+.
T Consensus 203 i~~~~~ll~~~~-~~~~~e~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~l~~~~g~s~~~~ 281 (432)
T PRK10406 203 LGAVLAVVALWL-RRQLDETSQQETRALKEAGSLKGLWRNRRAFIMVLGFTAAGSLCFYTFTTYMQKYLVNTAGMHANVA 281 (432)
T ss_pred HHHHHHHHHHHH-HhcCCCCchHHHhhhcccccHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHH
Confidence 988877665433 23333332211 1122357788899888766555444 356677788899999988889998888
Q ss_pred hhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh--h--hhhhHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy14075 231 GVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP--L--ARNINHLIVPNAGLGFAIGMVDSSMMPEL 306 (414)
Q Consensus 231 g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~--~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 306 (414)
+.......+...++..+.|+++||++||+.+..+..+..+....+. . .++.........+..+..+...+ ...
T Consensus 282 ~~~~~i~~~~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~ 358 (432)
T PRK10406 282 SGIMTAALFVFMLIQPLIGALSDKIGRRTSMLCFGSLAALFTVPILSALQNVSSPYAAFGLVMCALLIVSFYTS---ISG 358 (432)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHH---HHH
Confidence 8888888888888889999999999999877766554433322111 1 11222111112212222222222 122
Q ss_pred hhhhhcccccchhhHHhHHHHHHHH-HHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 307 GYLVDIRHTAVYGSVYAIGDVAFCL-GFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 307 ~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
....|.+|++.|+++.|+.+...++ .+...|.+.+.+ +..| +...+++.++..+++.+..++.+
T Consensus 359 ~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~l~ 424 (432)
T PRK10406 359 ILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVALSL-KSIGMETAFFWYVTLMAVVAFLVSLMLH 424 (432)
T ss_pred HHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHHHH-HHhCCCcHHHHHHHHHHHHHHHHHHHhh
Confidence 3467899999999999998877664 344577777754 5556 55566666666666665555543
No 36
>PRK03893 putative sialic acid transporter; Provisional
Probab=100.00 E-value=3.3e-35 Score=285.63 Aligned_cols=345 Identities=17% Similarity=0.162 Sum_probs=252.5
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
..|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+.+..+.++.+++.+++++++|++.+++.|++.|++
T Consensus 42 ~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 121 (496)
T PRK03893 42 VLTEVQGEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTLACGFAPGYWTLFIARLVIGMG 121 (496)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 45888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV 176 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 176 (414)
.+...+...+++.|++| +++|++++++...+.++|..++|.+++.+.++++||+.|++..+..++. +......|++++
T Consensus 122 ~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f~~~~~~~~~~-~~~~~~~p~~~~ 199 (496)
T PRK03893 122 MAGEYGSSATYVIESWP-KHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALFFIGILPIIFA-LWLRKNLPEAED 199 (496)
T ss_pred HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHH-HHHHHhCCCchh
Confidence 99999999999999999 5999999999999999999999999999999999999998755443332 222222333221
Q ss_pred -C-CCCCC---chhhh-hccC-hHHHH-----------------------------------------------------
Q psy14075 177 -K-QEVEP---PTLKS-LVMD-PYILI----------------------------------------------------- 196 (414)
Q Consensus 177 -~-~~~~~---~~~~~-~~~~-~~~~~----------------------------------------------------- 196 (414)
+ +++++ .+..+ ..++ +..+.
T Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (496)
T PRK03893 200 WKEKHAGKAPVRTMVDILYRGEHRIINILLTLAAAAALWFCFAGNLQNAAIVAVLGLLCAAIFISFMVQSSGKRWPTGVM 279 (496)
T ss_pred hhhhccccccchhHHHHHhcchhHHHHHHHHHHHHHHHHHHHHhhhcchhHHHHHHHHHHHHHHHHHHHhcccchhHHHH
Confidence 1 10011 11111 1111 10000
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q psy14075 197 AAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP 276 (414)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~ 276 (414)
.....+...........++|.|+++.+|++..+.+.+.+...++.+++.++.|+++||+++|+.+..+..+..+..+.+.
T Consensus 280 ~~~~~~~~~~~~~~~~~~lp~~l~~~~g~~~~~~g~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~ 359 (496)
T PRK03893 280 LMVVVLFAFLYSWPIQALLPTYLKTDLGYDPHTVANVLFFSGFGAAVGCCVGGFLGDWLGTRKAYVCSLLISQLLIIPVF 359 (496)
T ss_pred HHHHHHHHHhccchHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHh
Confidence 00000000001112346789999877899999999999999999999999999999999999988877766665544333
Q ss_pred hhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHH
Q psy14075 277 LAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLF 354 (414)
Q Consensus 277 ~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~ 354 (414)
... +.+......++.+.......+.. .+...+..|++.||+++|+.+....+|+.+||.+.|.+.|.+|++..+.
T Consensus 360 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~l~~~~g~~~~~~ 436 (496)
T PRK03893 360 AIGGANVWVLGLLLFFQQMLGQGISGLL---PKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGALIAQRLDLGTALA 436 (496)
T ss_pred hccccHHHHHHHHHHHHHHHhcccchhh---HHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHHHhccCChHHHHH
Confidence 322 22222222222222211121222 2345678888999999999999999999999999999999999988876
Q ss_pred HHHHHHHHHHHH
Q psy14075 355 IIAILDFMYAPL 366 (414)
Q Consensus 355 ~~~~~~~~~~~~ 366 (414)
..+.+..+..+.
T Consensus 437 ~~~~~~~~~~~~ 448 (496)
T PRK03893 437 SLSFSLTFVVIL 448 (496)
T ss_pred HHHHHHHHHHHH
Confidence 655544443333
No 37
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=100.00 E-value=1.6e-34 Score=271.77 Aligned_cols=333 Identities=20% Similarity=0.206 Sum_probs=269.3
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
+..|.+.+++|.|+.+++++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|+
T Consensus 26 ~~~p~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 105 (385)
T TIGR00710 26 PAFPEIAADLSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGLALSNNIETLLVLRFVQAF 105 (385)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHc
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+...+++.|++| +++|++++++.+....+|..++|.+++.+.++.+||+.|++.++..++..+..++..||++
T Consensus 106 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (385)
T TIGR00710 106 GASAGSVISQALVRDIYP-GEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAFLSLAGILLSALIFFILPETL 184 (385)
T ss_pred chhHHHHHHHHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHhCCCCC
Confidence 999999999999999999 4999999999999999999999999999999999999999998888777776666655544
Q ss_pred CCCCCC-----CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhh
Q psy14075 176 VKQEVE-----PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGP 250 (414)
Q Consensus 176 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 250 (414)
++++++ .+++++.+|+|+++...+...+..........+.|.++++.+|.++.+.+.+.....++.+++.++.++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~ 264 (385)
T TIGR00710 185 PYEARIQISTYFETFLLLLKSKMFWGYALIYGASFGGFFAFFSGAPFVYIDIMGVSPSVFGLLFALNIIAMIFGGFLNGR 264 (385)
T ss_pred CCcccCCHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHcChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332211 123456788998888777766666677777888899998889999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHHHhhhhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHH
Q psy14075 251 LGHRMGRYLAALLGLLIIGICLMMIPLAR-----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIG 325 (414)
Q Consensus 251 l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 325 (414)
+.||+++|+.+..+..+..++.+++.... +........++.|++.+...+... ....|..| +.++++.++.
T Consensus 265 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~-~~~g~~~~~~ 340 (385)
T TIGR00710 265 FIKKWGAKSLLRMGLILFAVSAVLLEITAILGLGSWAMIIGPMMFVGIGNSMISSIAM---AYALEDFP-HVAGTASALF 340 (385)
T ss_pred HHHhcCHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHH---HHHhccCc-ccchHHHHHH
Confidence 99999999988888777776655554432 222333345556666665544332 33445555 5679999999
Q ss_pred HHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075 326 DVAFCLGFAIGPAMSGTLVNTIGFEWML 353 (414)
Q Consensus 326 ~~~~~~g~~ig~~~~g~l~~~~g~~~~~ 353 (414)
+.....++.+.+.+.+.+.+..++...+
T Consensus 341 ~~~~~~~g~i~~~~~~~~~~~~~~~~~~ 368 (385)
T TIGR00710 341 GTLRLVLGAIVGYLVSLIHGNTAWPMSL 368 (385)
T ss_pred HHHHHHHHHHHHHHHHhccccChHHHHH
Confidence 9888877777777777555444444333
No 38
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=100.00 E-value=8.7e-35 Score=273.87 Aligned_cols=343 Identities=16% Similarity=0.148 Sum_probs=268.3
Q ss_pred hhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhh
Q psy14075 20 NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSC 99 (414)
Q Consensus 20 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~ 99 (414)
.+.+++|.|+.++|++.+...+...+.+++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++.+.
T Consensus 36 ~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~g~~~~~ 115 (400)
T PRK11646 36 RFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFATMAIAHEPWLLWLSCILSGLGGTL 115 (400)
T ss_pred HHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 45688999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCC-
Q psy14075 100 SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQ- 178 (414)
Q Consensus 100 ~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~- 178 (414)
..|...+++.|++|+ ++|++++++.+...++|..+||.+++.+. .++||+.|++.++..++..++..+..||+++++
T Consensus 116 ~~~~~~~~~~~~~~~-~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~~~~~~~~~~~i~~~~~~~~~~~~~~ 193 (400)
T PRK11646 116 FDPPRTALVIKLIRP-HQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCATGAVLFVLAAAFNAWLLPAYKLSTV 193 (400)
T ss_pred HHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHHHHHHHHHHHHHHHHHhCCccccccc
Confidence 899999999999994 99999999999999999999999999998 679999999998887776655555554432211
Q ss_pred -CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh-hhh
Q psy14075 179 -EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH-RMG 256 (414)
Q Consensus 179 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d-~~~ 256 (414)
++..+++++.+++|+++...+..+...........++|.|+++..+ ++.+.+.+....++....+....+++.| |.+
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~-~~~~~g~l~~~~~~~~~~~~~~~~~~~~~r~~ 272 (400)
T PRK11646 194 RTPVREGMTRVLRDKRFVTYVLTLTGYYMLAVQVMLMLPIMVNDIAG-SPSAVKWMYAIEACLSLTLLYPIARWSEKRFR 272 (400)
T ss_pred chhhHHHHHHHHcCchHHHHHHHHHHHHHHHHHHHHhhhhhHHhhcC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 1122356678889988765555444444444455678999888644 6678888888777766665555566665 456
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHH
Q psy14075 257 RYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIG 336 (414)
Q Consensus 257 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig 336 (414)
.++.+..+..+.+++.+.+...++.+......++.+++.+...+... +...+..|++++|+++|+.+...++|..+|
T Consensus 273 ~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~g~~~~~p~~~---~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig 349 (400)
T PRK11646 273 LEHRLMAGLLIMSLSMFPIGMVSNLQQLFTLICLFYIGSIIAEPARE---TLSASLADARARGSYMGFSRLGLALGGAIG 349 (400)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHccHH---HHHHhcCCcccchhhhhHHHHHHHHHHHhc
Confidence 56666777777777777776666665555555666777665544433 345677888999999999999999999999
Q ss_pred HHHHHHHHhhhc----hHHHHHHHHHHHHHHHHHHH
Q psy14075 337 PAMSGTLVNTIG----FEWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 337 ~~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~ 368 (414)
|.+.|++.|..+ ....+...+...+++.+...
T Consensus 350 ~~l~G~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 385 (400)
T PRK11646 350 YIGGGWLFDLGKALNQPELPWMMLGIIGLITLLALY 385 (400)
T ss_pred ccchHHHHHHHhhcCCcchHHHHHHHHHHHHHHHHH
Confidence 999999999753 34556555555555554443
No 39
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=100.00 E-value=5e-35 Score=276.95 Aligned_cols=335 Identities=19% Similarity=0.208 Sum_probs=258.2
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
..|.+.+++|.|+.+.|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|++
T Consensus 34 ~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 113 (405)
T TIGR00891 34 VLAEVAGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTLACGFAPGYITMFIARLVIGIG 113 (405)
T ss_pred HHHHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 45788999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC--ChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG--KTAPFLILSALALGDGLLQLLLLQPG 174 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g--w~~~f~~~~~~~~~~~~~~~~~~~~~ 174 (414)
.+...+...+++.|++|+ ++|++++++.+.+..+|..+++.+++.+.+..+ ||+.|++.++..++..+... ..||+
T Consensus 114 ~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~-~~~~~ 191 (405)
T TIGR00891 114 MGGEYGSSAAYVIESWPK-HLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRALFFISILPIIFALWLRK-NIPEA 191 (405)
T ss_pred hhhhhHHHHHHHHHhCCh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHHHH-hCCCC
Confidence 999999999999999994 999999999999999999999999999988776 99999887666555444333 33333
Q ss_pred CCCC--CCC----CchhhhhccC-----------------------hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCC
Q psy14075 175 VVKQ--EVE----PPTLKSLVMD-----------------------PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGA 225 (414)
Q Consensus 175 ~~~~--~~~----~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 225 (414)
++.+ +++ ....++..++ +.+........+.+........++|.|+.+.+|.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 271 (405)
T TIGR00891 192 EDWKEKHAGKALVRTMVDILYGGEHRIANIVMTLAAAMVQSAGKRWPTFVYLVVLVLFANLYSHPIQDLLPTYLKADLGL 271 (405)
T ss_pred hhHHHHhhhhhhhhhHHHHHhccchhhhhhhhhhhHHhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhCC
Confidence 2111 000 0111111110 0122222333333444456667889999888899
Q ss_pred CccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH-HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075 226 DKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM-MIPLARNINHLIVPNAGLGFAIGMVDSSMMP 304 (414)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 304 (414)
+..+.+.+.....++.+++.++.+++.||++||+.+..+.....+... .+...++.+...+..++.++..+...+...
T Consensus 272 s~~~~~~~~~~~~~~~~~g~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 350 (405)
T TIGR00891 272 SPHTVANIVVFSNIGAIVGGCVFGFLGDWLGRRKAYVCSLLAGQLLIIPVFAIGANVAVLGLGLFFQQMLVQGIWGILP- 350 (405)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchhhhHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHccchhhHH-
Confidence 999999999999999999999999999999999988877665533322 222233333333443445544444433333
Q ss_pred hhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHH
Q psy14075 305 ELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFII 356 (414)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~ 356 (414)
....|..|++.|+++.|+.+...++|..++|.+.|.+.|..| |+..+...
T Consensus 351 --~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~~~g~~~~~~~~~ 401 (405)
T TIGR00891 351 --KHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGALLAQRLDEYGTALASL 401 (405)
T ss_pred --HHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHHHHHhccccchhHHhh
Confidence 345678889999999999999999999999999999999999 87766543
No 40
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=100.00 E-value=1.3e-34 Score=274.55 Aligned_cols=350 Identities=17% Similarity=0.244 Sum_probs=276.3
Q ss_pred cchhhhhhhcCCcch-----HHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHH
Q psy14075 17 ARENRHKYLMGETKA-----VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARS 91 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~-----~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 91 (414)
..|.+.+++|.+..+ .|++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.+.++++.+++.|+
T Consensus 36 ~l~~~~~~~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (408)
T PRK09874 36 FLPLYVEQLGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSALGMGIVMVLMGLAQNIWQFLILRA 115 (408)
T ss_pred hHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 468888999998665 489999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhc
Q psy14075 92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLL 171 (414)
Q Consensus 92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 171 (414)
+.|++.+ ..+...+++.+++| +++|++++++......+|..++|.+++.+.+..+||+.|++.+++.++..+..++..
T Consensus 116 ~~g~~~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (408)
T PRK09874 116 LLGLLGG-FVPNANALIATQVP-RNKSGWALGTLSTGGVSGALLGPLAGGLLADSYGLRPVFFITASVLFLCFLVTLFCI 193 (408)
T ss_pred HHHHhhh-hHHhHHHHHHHhcC-HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999765 45777788999999 499999999999999999999999999999989999999999988877776666655
Q ss_pred cCCCCC-CCCCC---chhhhhccChHHHHHH-HHHHHHHHHHHhhhhchHHHHHHHhCCCcc---chhhHhHHHHHHHHh
Q psy14075 172 QPGVVK-QEVEP---PTLKSLVMDPYILIAA-GAITFANTGIAMLEPSLPIWMMDTMGADKW---QQGVSFLPASISYLI 243 (414)
Q Consensus 172 ~~~~~~-~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~g~~~~~~~~~~~~ 243 (414)
++++++ +++++ ++..+.+++|+++... ...............+++.|..+..+.... ..+.+....+++.++
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~l~~~~ 273 (408)
T PRK09874 194 RENFQPVSKKEMLHMREVVTSLKNPKLVLSLFVTTLIIQVATGSIAPILTLYVRELAGNVSNIAFISGMIASVPGVAALL 273 (408)
T ss_pred ccCcccccchhhhHHHHHHHhCcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHH
Confidence 554322 11111 2234456777665432 333334444455667788888775443221 234555666788888
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHh
Q psy14075 244 GTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYA 323 (414)
Q Consensus 244 ~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g 323 (414)
+.+..|++.||++||+.+..+..+..++.+.....++.+...+..++.|++.+...+...+. ..+..|++.+|+.++
T Consensus 274 ~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~g~~~~ 350 (408)
T PRK09874 274 SAPRLGKLGDRIGPEKILITALIFSVLLLIPMSFVQTPLQLGILRFLLGAADGALLPAVQTL---LVYNSSNQIAGRIFS 350 (408)
T ss_pred HHHHHHHHHhccccchhHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHhhhHhhHHHHHHH---HHHhCCcccceeeeh
Confidence 89999999999999999888888777777666666666666667777888887775554433 446667788899999
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 324 IGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 324 ~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
+.+....+|..+||.+.|.+.+..||+..|.+.+++.+++.+..+...
T Consensus 351 ~~~~~~~~g~~~gp~~~G~l~~~~g~~~~f~~~~~~~l~~~~~~~~~~ 398 (408)
T PRK09874 351 YNQSFRDIGNVTGPLMGAAISANYGFRAVFLVTAGVVLFNAVYSWNSL 398 (408)
T ss_pred HHHHHHHHHHHhhHHHHHHHHhhcchhHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999888888777665543
No 41
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=100.00 E-value=1.8e-34 Score=271.11 Aligned_cols=345 Identities=19% Similarity=0.173 Sum_probs=266.8
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
..+.+.+|++.++.+.+++.+.+.+++.+.+++.|+++||+||||+++++.++++++.+++.++.+. ++.|+++|++
T Consensus 25 ~~~~~~~~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~~~~~~~~~~~~---~~~r~l~G~~ 101 (393)
T PRK11195 25 AAIALLKELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLLGCLLMLFGIHP---LLAYGLVGIG 101 (393)
T ss_pred HHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHH
Confidence 3456678999999999999999999999999999999999999999999999999999888777664 7889999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV 176 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 176 (414)
.+...|+..+++.|++| +++|++++++.+....+|.++||.+++.+.+. .|+..+.+.+...++..+.. +..|++++
T Consensus 102 ~a~~~pa~~a~i~~~~~-~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~-~~~~~~~i~~~~~~~~~~~~-~~l~~~~~ 178 (393)
T PRK11195 102 AAAYSPAKYGILTELLP-GEKLVKANGWMEGSTIAAILLGTVLGGALADP-HAEAALAVCALIYLLAALFN-LFIPRLGA 178 (393)
T ss_pred HHHHHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHH-hcCCCCcc
Confidence 99999999999999999 59999999999999999999999999999985 48877777766554443333 34443322
Q ss_pred CCCC-C--C--------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhh
Q psy14075 177 KQEV-E--P--------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGT 245 (414)
Q Consensus 177 ~~~~-~--~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 245 (414)
++++ + . ..++.++++|.+........+.+.........+|.|+++.+|.++.+.|......+++.+++.
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~s~~~~G~~~~~~~~g~i~g~ 258 (393)
T PRK11195 179 RRPGQSWNPIALLRDFFHACRVLWRDKLGRFSLAGTTLFWGAGATLRFLVLAWAPVALGITLNQPAYLQAVVAIGIAVGA 258 (393)
T ss_pred cccccCCCHHHHHHHHHHHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHHHHHHHHHHHHHHHHH
Confidence 2111 1 1 113456777776655444444445555566677888888899999999999999999999999
Q ss_pred hhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc-hhhHHhH
Q psy14075 246 NLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV-YGSVYAI 324 (414)
Q Consensus 246 ~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~g~ 324 (414)
++.+++.||.++++.+..+. +.++..+.+...++.+......++.|++.+...+...+. ..+..|++. +|++.++
T Consensus 259 ~~~~~l~~~~~~~~~~~~g~-~~~~~~~~~~~~~~~~~~~~~~~~~G~~~g~~~~~~~~~---~q~~~~~~~~~g~~~a~ 334 (393)
T PRK11195 259 GAAARLVTLETVLRVLPAGI-LMGLVVLLMALQHSLLPAYPLLILIGALGGFFVVPMNAL---LQHRGHVLVGAGHSIAV 334 (393)
T ss_pred HHHHHHhcCCcccchHHHHH-HHHHHHHHHHHHhHHHHHHHHHHHHHHhhhhhhhhHHHH---HHhhCcccccchhHHHH
Confidence 99999999988887776664 334444444445555555566667788877765544444 334444444 6999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 325 GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 325 ~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
.+...+++..++..+.+.+ +.+|.+..+.+.+...+.+..+.+.++.
T Consensus 335 ~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 381 (393)
T PRK11195 335 QNFNENLAMLLMLGLYSLL-VKLGVPVVAVIVGFGLLVALAMALLWRW 381 (393)
T ss_pred HhHHHHHHHHHHHHHHHHH-HHcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999855 6789888888877777766666655544
No 42
>PRK15011 sugar efflux transporter B; Provisional
Probab=100.00 E-value=1.1e-33 Score=266.20 Aligned_cols=346 Identities=15% Similarity=0.147 Sum_probs=252.0
Q ss_pred hhhhhhcCCcchHHHHHHHHHH-HHHHhhhHHHHhhcccCCchhH-HHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Q psy14075 20 NRHKYLMGETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPM-FTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGS 97 (414)
Q Consensus 20 ~~~~~~g~s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 97 (414)
.+.+++|.|++++|++.+...+ ++.++.+++|+ .||+||||.+ ..+.+..+++..+.+++++++.+++.+.+.|...
T Consensus 41 ~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 119 (393)
T PRK15011 41 FLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLGVLACTLFAWNRNYFVLLFVGVFLSSFG 119 (393)
T ss_pred HHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 3578999999999999877655 55555555555 9999999875 5566666788888889999999877765555555
Q ss_pred hhhhhhHHHHHhhcCCCcchh--hHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 98 SCSSVSGMGMLAERYPDDRER--GNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~~r--~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+...|...+++.|+.+ +++| +...++.+.+.++|.+++|++++.+.+++|||..|++.++..++..+..++..||.+
T Consensus 120 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 198 (393)
T PRK15011 120 STANPQMFALAREHAD-KTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMGFSFTVMYLSAAVAFIVCGVMVWLFLPSMR 198 (393)
T ss_pred HhhHHHHHHHHHHHhh-hccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhhcCccC
Confidence 6778888888888876 3544 345688899999999999999999999999999999999888887777666666554
Q ss_pred CCCCCCCchhhhhccChH-HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh
Q psy14075 176 VKQEVEPPTLKSLVMDPY-ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR 254 (414)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~ 254 (414)
+++++++.+.+...++++ .+...............+..+.|.|+++.+|.++.+.+.+.....++.+++.++.|+++||
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~g~~~~~~~~~~i~~~~~~G~l~dr 278 (393)
T PRK15011 199 KELPLATGTLEAPRRNRRDTLLLFVICTLMWGTNSLYIINMPLFIINELHLPEKLAGVMMGTAAGLEIPTMLIAGYFAKR 278 (393)
T ss_pred CCCccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 332221112222223332 3333333344444555566789999988899999999988888778888899999999999
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHh
Q psy14075 255 MGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFA 334 (414)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 334 (414)
+++|+.+..+.....+.+..+...++.+......++.+++.+...+.... ...|..|+ ++|++.++.+...++|..
T Consensus 279 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~g~~~~~~~~---~~~~~~p~-~~g~~~~~~~~~~~lg~~ 354 (393)
T PRK15011 279 LGKRFLMRVAAVAGVCFYAGMLMAHSPAILLGLQLLNAIYIGILGGIGML---YFQDLMPG-QAGSATTLYTNTSRVGWI 354 (393)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhCCC-CcchHHHHHHHHHHHHHH
Confidence 99998877766655555444444455544444445555555544333322 24465664 589999999999999999
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 335 IGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 335 ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
++|.+.|.+.|..||+..|.+.+++.+++.+..+..+
T Consensus 355 ~g~~l~G~i~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 391 (393)
T PRK15011 355 IAGSLAGIVAEIWNYHAVFWFALVMIIATLFCLLRIK 391 (393)
T ss_pred HHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999888888777776666554
No 43
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=100.00 E-value=3.4e-34 Score=282.51 Aligned_cols=350 Identities=11% Similarity=0.037 Sum_probs=273.9
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
.+|.+.+++|.+..+.+++.+++.++.+++++++|+++||+|||++++++.++.+++.++++++++++.++++|++.|++
T Consensus 189 ilp~i~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l~G~g 268 (742)
T TIGR01299 189 VLPSAEKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLLSGFG 268 (742)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 46888899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-------------cCChhHHHHHHHHHHHH
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-------------VGKTAPFLILSALALGD 163 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-------------~gw~~~f~~~~~~~~~~ 163 (414)
.+...+...+++.|++| .++|++.++++.+++.+|.++++.++..+... .+||+.+++.++..++.
T Consensus 269 ~g~~~p~~~~~isE~~p-~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~lp~ll~ 347 (742)
T TIGR01299 269 IGGAIPIVFSYFAEFLA-QEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCAFPCVFA 347 (742)
T ss_pred HHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHHHHHHHH
Confidence 99999999999999999 49999999999999999999999888776643 35899888887776665
Q ss_pred HHHHHHhccCCCCC--------------------C-C----C-----------------------CCc------------
Q psy14075 164 GLLQLLLLQPGVVK--------------------Q-E----V-----------------------EPP------------ 183 (414)
Q Consensus 164 ~~~~~~~~~~~~~~--------------------~-~----~-----------------------~~~------------ 183 (414)
.+.. ++.||.++. . + + +..
T Consensus 348 ll~~-~~lPESPrwL~~~gr~~eA~~iL~~i~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 426 (742)
T TIGR01299 348 IGAL-TFMPESPRFFLENGKHDEAWMILKLIHDTNMRAKGHPEKVFSVNHIKTIHQEDELIEIESDTGTWYQRCFVRALS 426 (742)
T ss_pred HHHH-HHcCCCHHHHHHCCCHHHHHHHHHHHhcCCCCCcCchhHHHHHHHHHHhhhhhhhhcccccccchhhcchhhhhh
Confidence 4443 444443210 0 0 0 000
Q ss_pred -------hhhhhccCh---HHHHHHHHHHHHHHHHHhhhhchHHHHHHH----h--------------------------
Q psy14075 184 -------TLKSLVMDP---YILIAAGAITFANTGIAMLEPSLPIWMMDT----M-------------------------- 223 (414)
Q Consensus 184 -------~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-------------------------- 223 (414)
+++++++.+ +.+.+++.+++..+.++++..|+|.++.+. +
T Consensus 427 ~~~~~~~~~~~lf~~~~~~~tl~l~~~wf~~~~~yygl~~w~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 506 (742)
T TIGR01299 427 EGGGIWGNFLRCFNPEVREITIKLMGVWFTLSFGYYGLSVWFPDMIKHLQADDYAALTKNFPGDKVAHFSFNFTLENQIH 506 (742)
T ss_pred hhhhHHHHHHHHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccchhccccccchhhhhc
Confidence 122233332 345667778888899999999999876441 0
Q ss_pred -----------CC-----C----------------c--------------------------------------------
Q psy14075 224 -----------GA-----D----------------K-------------------------------------------- 227 (414)
Q Consensus 224 -----------g~-----~----------------~-------------------------------------------- 227 (414)
|+ + .
T Consensus 507 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~~~ 586 (742)
T TIGR01299 507 RGGEYDNDKFIGLKFKSVSFEDSLFEECTFDDVTSSNTFFKNCTFIDTLFENTDFEEYKFIDSEFQNCSFLHNKEGCPID 586 (742)
T ss_pred cccccccchhhcccccccccccccccccceeeccccchhhhccchhhhhccccchhhhhhhhhhhhhccccccCCccCcc
Confidence 00 0 0
Q ss_pred --------cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhh
Q psy14075 228 --------WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVD 299 (414)
Q Consensus 228 --------~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 299 (414)
........+.+++.+++.++.++++||+|||+++..+.++.+++.+++.+.++...+++..++.+++.+...
T Consensus 587 ~~~~~~~~~~~~~~~~l~~l~~i~G~il~g~L~Dr~GRr~~l~~~~~lsai~~ll~~~~~s~~~ll~~~~l~g~~~~~~~ 666 (742)
T TIGR01299 587 FDGDDEGAYMIYFVNFLGTLAVLPGNIVSALLMDKIGRLRMLAGSMVLSCISCFFLSFGNSESAMIALLCLFGGLSIAAW 666 (742)
T ss_pred CCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHH
Confidence 001233456678889999999999999999999999999999988888877665555555556666655543
Q ss_pred hhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 300 SSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
+ ....++.|.+|++.|++++|+.+....+|.+++|++.|.+.+. +....|++.+++.++++++.+++++
T Consensus 667 ~---~~~a~~aEl~Pt~~Rgta~Gi~~~~~rlGaiigp~i~g~L~~~-~~~~pf~i~a~~lll~~ll~~~LPE 735 (742)
T TIGR01299 667 N---ALDVLTVELYPSDKRATAFGFLNALCKAAAVLGILIFGSFVGI-TKAAPILFASAALACGGLLALKLPD 735 (742)
T ss_pred H---HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 3 3334578999999999999999999999999999999988874 4566777777777777666666654
No 44
>PRK11043 putative transporter; Provisional
Probab=100.00 E-value=9.6e-34 Score=267.79 Aligned_cols=333 Identities=18% Similarity=0.190 Sum_probs=262.9
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
..|++.+++|.++++.+++.+++.++..++++++|+++||+|||+++..+.++.+++.+++.++++++.+++.|+++|++
T Consensus 28 ~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~G~~ 107 (401)
T PRK11043 28 AFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLVLRFVQAVG 107 (401)
T ss_pred hHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHhh
Confidence 45778999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV 176 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 176 (414)
.+...+...+++.|++|+ +++++..+.......+|..++|.+++.+.+++|||+.|++.++..++..+..++..+++++
T Consensus 108 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 186 (401)
T PRK11043 108 VCSAAVIWQALVIDRYPA-QKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILPTLRLKPSKKA 186 (401)
T ss_pred hHHHHHHHHHHHHHhcCc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 988888888999999994 8899999999999999999999999999999999999999988888776666555544332
Q ss_pred CC-CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075 177 KQ-EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM 255 (414)
Q Consensus 177 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 255 (414)
++ ++++.++++.+|+|+++...+...+....+.....+.|.++++ .|+++.+.++......++.+++.++.+++.||+
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~g~~~~~~l~~r~ 265 (401)
T PRK11043 187 RKQSQDALTFKQLLKSKTYLGNVLIFAACSAAFFAWLTGSPFILEQ-MGYSPADIGLSYVPQTIAFLVGGYGCRAALQKW 265 (401)
T ss_pred cccchHHHHHHHHHcChhHHHHHHHHHHHHHHHHHHHHHhHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 22 2233467788899988766555555555566677788988876 699999999888888889999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHHHh---hh--hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHH
Q psy14075 256 GRYLAALLGLLIIGICLMMI---PL--ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFC 330 (414)
Q Consensus 256 ~~~~~~~~~~~~~~i~~~~~---~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 330 (414)
++|+.........+++.+.+ .. .++.+.......+.+++.+...+... +...+..| +.+|++.|+.+....
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~-~~~g~~~g~~~~~~~ 341 (401)
T PRK11043 266 GGEQLLPWLLVLFAVSVIAIWLASLLSHPSLVPLLIPFCVMAAANGAIYPIVV---AQALRPFP-QATGKAAALQNTLQL 341 (401)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHHHHHHHH---HHHhhhCc-ccChHHHHHHHHHHH
Confidence 98887655554444433322 11 22333334445556666666544433 23344444 568999999999999
Q ss_pred HHHhHHHHHHHHHHhhhchHHHHHH
Q psy14075 331 LGFAIGPAMSGTLVNTIGFEWMLFI 355 (414)
Q Consensus 331 ~g~~ig~~~~g~l~~~~g~~~~~~~ 355 (414)
.++..++.+.|.+.|.......+..
T Consensus 342 ~~~~~~~~~~g~l~~~~~~~~~~~~ 366 (401)
T PRK11043 342 GLCFLASLLVSALISTPLLTTGSVM 366 (401)
T ss_pred HHHHHHHHHHHHccCCChhHHHHHH
Confidence 9999999999999886554444433
No 45
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=100.00 E-value=2.3e-33 Score=263.18 Aligned_cols=348 Identities=16% Similarity=0.186 Sum_probs=261.2
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
+..|.+.+++|.|+++.+++.+.+.++..+++++.|+++||+|||+++..+.++.+++.+++.++++++.+++.|++.|+
T Consensus 12 p~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~g~ 91 (377)
T PRK11102 12 PALPVIAADFGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIYMRFLHGL 91 (377)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+...+++.|++| +++|++++++.+....+|..++|.+++.+.+..+||+.|++.+++.++..+...+..+|++
T Consensus 92 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (377)
T PRK11102 92 AAAAASVVINALMRDMFP-KEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAALVFFFIPETL 170 (377)
T ss_pred HHHHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999999999999999999 4999999999999999999999999999999999999999998888777666665555543
Q ss_pred CCCCCCC-------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhh
Q psy14075 176 VKQEVEP-------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLF 248 (414)
Q Consensus 176 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 248 (414)
+++++++ +++++.+++|+++...+...+.......+..+.|.++.+.+|.++.+.+.......++.+++.++.
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~ 250 (377)
T PRK11102 171 PKERRQPFHLRTTIRNFASLFRHKRVLGYMLASGFSFAGMFSFLTAGPFVYIELNGVSPQNFGYYFALNIVFLFVMTIIN 250 (377)
T ss_pred cccccCCCChHHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 2222111 134467788888877776666666677777788888888889999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhh---hhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhH
Q psy14075 249 GPLGHRMGRYLAALLGLLIIGICLMMIP---LAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAI 324 (414)
Q Consensus 249 g~l~d~~~~~~~~~~~~~~~~i~~~~~~---~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 324 (414)
+++.||+++|+.+..+..+..+..+.+. ..+ +.+.......+.+.+.+... ........|..| +.+|++.++
T Consensus 251 g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~-~~~g~~~~~ 326 (377)
T PRK11102 251 SRFVRRVGALNMLRFGLWIQFIMGIWLVVSALLDLGFWALVVGVAAFVGCVSMIS---SNAMAVILDEFP-HMAGTASSL 326 (377)
T ss_pred HHHHHHhCHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhh---HHHHHHHhcccc-ccchHHHHH
Confidence 9999999999988887766544322222 112 22222223333333333222 222233445444 778999998
Q ss_pred HHHHH-HHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy14075 325 GDVAF-CLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 325 ~~~~~-~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 370 (414)
.+... .+|..+++.+.+. .+ .++...+...+++.+++.+..++.
T Consensus 327 ~~~~~~~~g~~~g~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~ 371 (377)
T PRK11102 327 AGTLRFGIGAIVGALLSLA-PF-TSAWPMVWSMAFCSILSILFYLYA 371 (377)
T ss_pred HHHHHHHHHHHHHHHHHhc-cC-CChHHHHHHHHHHHHHHHHHHHHh
Confidence 77654 3555566655432 22 223333333444444444444443
No 46
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=100.00 E-value=5.8e-34 Score=265.80 Aligned_cols=347 Identities=12% Similarity=0.085 Sum_probs=265.1
Q ss_pred hhhhh-hhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh-----hhHHHHHHHHHH
Q psy14075 19 ENRHK-YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-----RTYGVLFLARSL 92 (414)
Q Consensus 19 ~~~~~-~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-----~~~~~l~~~r~l 92 (414)
+.+.+ ++|+|++|.+++.+++.+++.+++++.|+++||+|.|+++.++.++.++.+++.+++ ++++.+++.|++
T Consensus 58 ~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~~~~~~~a~~~~~~s~~~lli~r~l 137 (462)
T PRK15034 58 VNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIPCVWLGIAVQNPNTPFGIFIVIALL 137 (462)
T ss_pred HHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHcccCCCHHHHHHHHHH
Confidence 44444 899999999999999999999999999999999999999999999999999999987 899999999999
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh-----h-------------hcCChhHHH
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY-----Q-------------FVGKTAPFL 154 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~-----~-------------~~gw~~~f~ 154 (414)
.|++ +..++.....+++|+| +++||+++|+.....++|..+++++...+. . ..+||.+++
T Consensus 138 ~Gig-g~~f~~~~~~vs~wfp-~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~~l~~~~G~~~~~~~~g~~~~~~~~~~ 215 (462)
T PRK15034 138 CGFA-GANFASSMGNISFFFP-KAKQGSALGINGGLGNLGVSVMQLVAPLVIFVPVFAFLGVNGVPQADGSVMSLANAAW 215 (462)
T ss_pred HHHH-HHhHHHHHHHHHHHCC-HhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHhccccccccccchHHHHHHHH
Confidence 9997 7788889999999999 599999999998777777776665554433 2 234778888
Q ss_pred HHHHHHHHHHHHHHHhccCCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHh
Q psy14075 155 ILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSF 234 (414)
Q Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 234 (414)
+..++.++..++.+++.+++++ ++.+.++.++.+|+|+.|..++..++.+..+.++..++|.|+++.+ +........
T Consensus 216 ~~~~~~iv~~i~~~~~~~~~~~-~~~~~~~~~~vlk~~~~Wllslly~~tFG~fvg~s~~lp~~~~~~~--~~~~~l~~~ 292 (462)
T PRK15034 216 IWVPLLAIATIAAWSGMNDIAS-SRASIADQLPVLQRLHLWLLSLLYLATFGSFIGFSAGFAMLAKTQF--PDVNILRLA 292 (462)
T ss_pred HHHHHHHHHHHHHHHhCCCccc-cccCHHHHHHHhCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHc--ChHHHHHHH
Confidence 8888888777777777555432 3334456778999999999999999999899989889999998855 332332233
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh-hhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy14075 235 LPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP-LAR-----NINHLIVPNAGLGFAIGMVDSSMMPELGY 308 (414)
Q Consensus 235 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~-~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 308 (414)
.+..+...+.++++|+++||+|+++++.++.+.+.++..... ..+ +.+......+...++.|.......-.
T Consensus 293 ~l~~l~~~l~rplgG~LADRiG~~~vl~~~~i~~~i~~~~~~l~lp~~~~~~~~~~~~~~~~l~~~~G~gngsvfk~--- 369 (462)
T PRK15034 293 FFGPFIGAIARSVGGAISDKFGGVRVTLINFIFMAIFSALLFLTLPGTGSGNFIAFYAVFMGLFLTAGLGSGSTFQM--- 369 (462)
T ss_pred HHHHHHHHHHHHhhHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHHhcccchHHHHh---
Confidence 445677888899999999999999999888877766643322 221 23333333333333334333222212
Q ss_pred hhhcccc---------------------cchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHH
Q psy14075 309 LVDIRHT---------------------AVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPL 366 (414)
Q Consensus 309 ~~~~~~~---------------------~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~ 366 (414)
+...+|+ ++.|.+.|+......+|+++-|.+.|...+.+| +...|+...+..+++.++
T Consensus 370 ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~~~~~~g~~~~~~~~~~~~~~~~~~~ 449 (462)
T PRK15034 370 IAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGMSLNMTGSPVGAMKVFLIFYIVCVLL 449 (462)
T ss_pred hHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHcCCcHHHHHHHHHHHHHHHHH
Confidence 2222221 256899999999999999999999999999877 888898888888888877
Q ss_pred HHHhcCC
Q psy14075 367 LYLLRNP 373 (414)
Q Consensus 367 ~~~~~~~ 373 (414)
.+....+
T Consensus 450 ~w~~y~r 456 (462)
T PRK15034 450 TWLVYGR 456 (462)
T ss_pred HHHHhcc
Confidence 7665443
No 47
>PRK15075 citrate-proton symporter; Provisional
Probab=100.00 E-value=2.8e-34 Score=273.78 Aligned_cols=330 Identities=17% Similarity=0.167 Sum_probs=235.4
Q ss_pred ccchhhhhhhcCCcchHHHHH-HHH-----HHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHH-----
Q psy14075 16 VARENRHKYLMGETKAVGVMF-GSK-----AFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG----- 84 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~-s~~-----~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~----- 84 (414)
...|.+.+|++.++.+.+.+. +.. .+...+++++.|+++||+||||.++.+.+++.+++++++++++++
T Consensus 36 ~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~l~~~~~~~~~~~~~ 115 (434)
T PRK15075 36 FYATAIAKTFFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSIMASGTLLIAFVPGYATIGLA 115 (434)
T ss_pred HHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHHHHHHHHHHHhCCcHHHHHHH
Confidence 456888999999888765543 322 222347889999999999999999999999999999999999987
Q ss_pred ---HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh--------hhcCChhHH
Q psy14075 85 ---VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY--------QFVGKTAPF 153 (414)
Q Consensus 85 ---~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~gw~~~f 153 (414)
.+++.|+++|++.+...+....+++|++|+ ++|++++++.....++|..+++.+++.+. +.+|||++|
T Consensus 116 ~~~~l~~~R~l~G~~~g~~~~~~~~~~~e~~p~-~~rg~~~~~~~~~~~~g~~~g~~~g~~l~~~~~~~~~~~~gWr~~f 194 (434)
T PRK15075 116 APLLVLLGRLLQGFSAGVELGGVSVYLAEIATP-GRKGFYTSWQSASQQVAVVFAALLGYLLNQWLSPAQMAEWGWRIPF 194 (434)
T ss_pred HHHHHHHHHHHhhccccccHHHHHHHHHhhCCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhccchHHHH
Confidence 468999999999999999889999999995 99999999999998888888888877663 467999999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCC-CCCCC----chhhhhccChHHHHH-HHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075 154 LILSALALGDGLLQLLLLQPGVVK-QEVEP----PTLKSLVMDPYILIA-AGAITFANTGIAMLEPSLPIWMMDTMGADK 227 (414)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 227 (414)
++..+...+ ........||+++. +++++ ..+++..++++.+.. ....++....+.....+.|.|+++.+|++.
T Consensus 195 ~~~~~~~~~-~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~~~ 273 (434)
T PRK15075 195 LIGCLIVPF-IFLIRRSLEETEEFLARKHRPSMREIFRSLAANWRIVLAGMLMVAMTTVSFYLITVYTPTFGKTVLHLSA 273 (434)
T ss_pred HHHHHHHHH-HHHHHHhcCCCHHHHHhhhccccccHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 876543322 22222222222110 01111 113333455554433 333334455666788899999998889999
Q ss_pred cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH-Hhh-h--hhhhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075 228 WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM-MIP-L--ARNINHLIVPNAGLGFAIGMVDSSMM 303 (414)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~-~~~-~--~~~~~~~~~~~~~~g~~~~~~~~~~~ 303 (414)
.+.++......++.+++.++.|+++||++||+....+..+..+... .+. . .++.........+.+++.+...+...
T Consensus 274 ~~~~~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 353 (434)
T PRK15075 274 ADSLLVTLCVGVSNFIWLPIGGALSDRIGRRPVLIAFTVLAILTAYPALSWLVAAPSFARMLAVELWLSFLYGSYNGAMV 353 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHhhHH
Confidence 8888888888999999999999999999999887766544432211 111 1 12222222333444555555433333
Q ss_pred hhhhhhhhcccccchhhHHhHHHHHHH-HHHhHHHHHHHHHHhhhchH
Q psy14075 304 PELGYLVDIRHTAVYGSVYAIGDVAFC-LGFAIGPAMSGTLVNTIGFE 350 (414)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~-~g~~ig~~~~g~l~~~~g~~ 350 (414)
....|..|++.|+++.|+.+.... +++.++|.+.|++.|..|+.
T Consensus 354 ---~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~i~~~~g~~ 398 (434)
T PRK15075 354 ---VALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTWLIHVTGDK 398 (434)
T ss_pred ---HHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHHHHHhcCCc
Confidence 346788899999999999655554 45888999999999998853
No 48
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=100.00 E-value=5.6e-34 Score=264.27 Aligned_cols=330 Identities=28% Similarity=0.456 Sum_probs=297.5
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
...|.+.+++|.++.+.+++.+...++..+++++.|+++||+|||+.+..+.++..++.++..+.++++.+++.|++.|+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 99 (352)
T cd06174 20 PALPLLAEDLGLSASQAGLIVSAFSLGYALGSLLAGYLSDRFGRRRVLLLGLLLFALGSLLLAFASSLWLLLVGRFLLGL 99 (352)
T ss_pred hhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCCchhhHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHc
Confidence 34577889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+...+++.|++| +|+|++.+++.+...++|..++|.+++.+.+..+||+.|++.++..++..+...+..
T Consensus 100 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 174 (352)
T cd06174 100 GGGALYPAAAALIAEWFP-PKERGRALGLFSAGFGLGALLGPLLGGLLAESLGWRWLFLILAILGLLLALLLLFLL---- 174 (352)
T ss_pred ccccccHhHHHHHHHhCC-ccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHH----
Confidence 999999999999999999 499999999999999999999999999999999999999999988887776665553
Q ss_pred CCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh
Q psy14075 176 VKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM 255 (414)
Q Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~ 255 (414)
|+++...+..++..........+.|.+.++.+|.+..+.+.......++..++.++.+++.||+
T Consensus 175 ----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 238 (352)
T cd06174 175 ----------------RLLLLLALAFFLLSFGYYGLLTYLPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRL 238 (352)
T ss_pred ----------------HHHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777788888888888889999999999987799999999999999999999999999999999
Q ss_pred hhHH-HHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHh
Q psy14075 256 GRYL-AALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFA 334 (414)
Q Consensus 256 ~~~~-~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 334 (414)
++|+ .+..+..+..++.+.+...++.+......++.+++.+...+.... ...|..|+++|++.+|+.+...+++..
T Consensus 239 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 315 (352)
T cd06174 239 GRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGFGLGFAFPALLT---LASELAPPEARGTASGLFNTFGSLGGA 315 (352)
T ss_pred HhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHhccchhHHH---HHHhhcCHHHHHHHHHHHHHHHHHHHH
Confidence 9999 898999999998888888777777777888888888877654443 466777889999999999999999999
Q ss_pred HHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy14075 335 IGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 335 ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (414)
++|.+.|.+.|..+++..+.+.+++.+++.+..+.
T Consensus 316 i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~~ 350 (352)
T cd06174 316 LGPLLAGLLLDTGGYGGVFLILAALALLAALLLLL 350 (352)
T ss_pred HHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhee
Confidence 99999999999999999999998888887766543
No 49
>PRK10133 L-fucose transporter; Provisional
Probab=100.00 E-value=1.3e-33 Score=268.32 Aligned_cols=343 Identities=13% Similarity=0.062 Sum_probs=263.3
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHH---HhhhhHHHHHHHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF---AFGRTYGVLFLARSLQ 93 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~~~~~~l~~~r~l~ 93 (414)
..|.+++++|.|+.+.|++.+.+.+++.+++++.|++.||+||||++..+.++++++.+++ .++++++.++++|+++
T Consensus 48 ~~p~i~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~l~~~~~~a~~~~~ll~~r~l~ 127 (438)
T PRK10133 48 LLPQFQQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAALFWPAAEIMNYTLFLVGLFII 127 (438)
T ss_pred HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHH
Confidence 4588999999999999999999999999999999999999999999999999999999885 4688999999999999
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh------------------h--------c
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ------------------F--------V 147 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~------------------~--------~ 147 (414)
|+|.+...+...+++.|+.| +++|.+.++..+..+.+|..+++.+++.+.. . .
T Consensus 128 G~g~g~~~~~~~~~v~~~~~-~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~~~~~~~~~~~~~~~l~~~~~~~w~~~~~~ 206 (438)
T PRK10133 128 AAGLGCLETAANPFVTVLGP-ESSGHFRLNLAQTFNSFGAIIAVVFGQSLILSNVPHQSQDVLDKMTPEQLSAYKHSLVL 206 (438)
T ss_pred HHHHHHHHhhHHHHHHHhCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhhhhccChhhHHHHHHHHHH
Confidence 99999999999999999876 4777778999999999999999998875441 0 2
Q ss_pred CChhHHHHHHH-HHHHHHHHHHHhccCCCCCCCCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHH-
Q psy14075 148 GKTAPFLILSA-LALGDGLLQLLLLQPGVVKQEVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWM- 219 (414)
Q Consensus 148 gw~~~f~~~~~-~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 219 (414)
+||++|+.... ..++..+......|+.+++++++ .++.++++|+|.++...+..++..........|.+.|+
T Consensus 207 ~w~~~f~~~~~v~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~~l~~~~~~~~~~~~~~~~~~~l~ 286 (438)
T PRK10133 207 SVQTPYMIIVAIVLLVALLIMLTKFPALQSDNHSDAKQGSFSASLSRLARIRHWRWAVLAQFCYVGAQTACWSYLIRYAV 286 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccccchhhhHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 56767764443 33333333232223322111111 12346788999888776666777777777777888885
Q ss_pred HHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhh
Q psy14075 220 MDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVD 299 (414)
Q Consensus 220 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 299 (414)
++.+|.++.++++.+....++.++++++.+++.||+++|+.+..+..+..+++++..+.++.. ......+.|++.+..+
T Consensus 287 ~~~~g~s~~~ag~~~~~~~~~~~vG~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~glg~~~i~ 365 (438)
T PRK10133 287 EEIPGMTAGFAANYLTGTMVCFFIGRFTGTWLISRFAPHKVLAAYALIAMALCLISAFAGGHV-GLIALTLCSAFMSIQY 365 (438)
T ss_pred hhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChH-HHHHHHHHHHHHHHHH
Confidence 567899999999999999999999999999999999999988888777666655554444432 2445667888888887
Q ss_pred hhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHH
Q psy14075 300 SSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPL 366 (414)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~ 366 (414)
|...+. ..+..|++ .+.+.++.. ...+|+.++|++.|.+.|..| .+..|++...+.+.....
T Consensus 366 P~~~s~---a~~~~~~~-~~~as~l~~-~~~~g~~~~~~i~G~l~~~~g~~~~~~~v~~~~~~~~~~~ 428 (438)
T PRK10133 366 PTIFSL---GIKNLGQD-TKYGSSFIV-MTIIGGGIVTPVMGFVSDAAGNIPTAELIPALCFAVIFIF 428 (438)
T ss_pred HHHHHH---HHcccchh-hccchhHHh-HHhccchHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHH
Confidence 766654 44544443 467777765 455789999999999999988 788887665555544443
No 50
>PRK09952 shikimate transporter; Provisional
Probab=100.00 E-value=2.4e-33 Score=267.25 Aligned_cols=346 Identities=14% Similarity=0.100 Sum_probs=250.8
Q ss_pred hhhhh--cCCcchHHHHH-----HHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHH--------H
Q psy14075 21 RHKYL--MGETKAVGVMF-----GSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG--------V 85 (414)
Q Consensus 21 ~~~~~--g~s~~~~g~~~-----s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~--------~ 85 (414)
+.+++ +.++. .+++. ++..++..+++++.|+++||+|||+++..+.+++++++++++++++++ .
T Consensus 49 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (438)
T PRK09952 49 FNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWMMGIATALIGLLPSFSTIGWWAPVL 127 (438)
T ss_pred HHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHH
Confidence 34444 56665 45553 345567789999999999999999999999999999999999999987 5
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh--------hcCChhHHHHHH
Q psy14075 86 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ--------FVGKTAPFLILS 157 (414)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~--------~~gw~~~f~~~~ 157 (414)
+++.|+++|++.|..++...+++.|++|+ |+|++..+..+.+..+|..+++.+...+.. .+|||++|++.+
T Consensus 128 l~~~R~l~G~~~g~~~~~~~~~~~e~~p~-~~rg~~~~~~~~g~~~G~~l~~~~~~~l~~~~~~~~~~~~gWr~~f~~~~ 206 (438)
T PRK09952 128 LVTLRAIQGFAVGGEWGGAALLAVESAPK-NKKAFYSSGVQVGYGVGLLLSTGLVSLISMMTTDEQFLSWGWRIPFLFSI 206 (438)
T ss_pred HHHHHHHHHhhhcccHHHHHHHHHHhCCC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHhhccChHHHHHHHH
Confidence 88999999999999999999999999995 999999999999999999999887766653 479999999888
Q ss_pred HHHHHHHHHHHHhccCCCCC--C--C--C--CCch-hhhhccChHHHHHHH-HHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075 158 ALALGDGLLQLLLLQPGVVK--Q--E--V--EPPT-LKSLVMDPYILIAAG-AITFANTGIAMLEPSLPIWMMDTMGADK 227 (414)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~--~--~--~--~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 227 (414)
++.++... .....||+++. + + + ++.+ .+.++|+|+.+.... ..++.....+....+.|.|+++.+|.+.
T Consensus 207 ~~~l~~~~-l~~~~~es~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~~~~g~s~ 285 (438)
T PRK09952 207 VLVLIALW-VRNGMEESAEFEQQQHEQAAAKKRIPVIEALLRHPGAFLKIIALRLCELLTMYIVTAFALNYSTQNLGLPR 285 (438)
T ss_pred HHHHHHHH-HHHhCCCChhHHHHHhhcccccccCCHHHHHHHchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCH
Confidence 77654332 22233333211 0 0 0 1111 223567777665543 3444556667778899999988888887
Q ss_pred cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh---hh-hhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075 228 WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL---AR-NINHLIVPNAGLGFAIGMVDSSMM 303 (414)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~---~~-~~~~~~~~~~~~g~~~~~~~~~~~ 303 (414)
..........++..+++.++.|+++||++||+.+..+.++..++.+.+.. .. +.+......++.+++.+...+...
T Consensus 286 ~~~~~~~~~~g~~~~i~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 365 (438)
T PRK09952 286 ELFLNIGLLVGGLSCLTIPCFAWLADRFGRRRVYITGALIGTLSAFPFFMALEAQSIFWIVFFSIMLANIAHDMVVCVQQ 365 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 66555555667777888899999999999999888776665554332222 11 222223334444566555544433
Q ss_pred hhhhhhhhcccccchhhHHhHHHHH-HHHHHhHHHHHHHHHHhhh--chHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 304 PELGYLVDIRHTAVYGSVYAIGDVA-FCLGFAIGPAMSGTLVNTI--GFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~ig~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
....|.+|.+.|+++.|+.+.. ..+++.++|.+.+++.|.. +|...+.+.+++.+++.+..+..++
T Consensus 366 ---~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~~~~ 434 (438)
T PRK09952 366 ---PMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAALVTYFGGSWHSVAIYLLAGCLISAMTALLMKD 434 (438)
T ss_pred ---HHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHHHHHHHHccc
Confidence 3466888999999999986555 4589999999999999855 3777888777777777777665543
No 51
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=100.00 E-value=4.9e-35 Score=274.35 Aligned_cols=335 Identities=16% Similarity=0.119 Sum_probs=263.7
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 94 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (414)
....|.+.+++|.|+++.|++.+.+.+++.+++++.|+++||+|||+++..+.++.+++.++++++++++.+++.|++.|
T Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 94 (379)
T TIGR00881 15 ALAMPYLVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSLWVMAALWALNG 94 (379)
T ss_pred hhhhHHHHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 34567788999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhch-hhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGP-PFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQP 173 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~-~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 173 (414)
++.+...+...+++.|++| +++|++++++.+.+..+|..++| .+++.+.+..+||+.|++.+++.++..+..++..++
T Consensus 95 ~~~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (379)
T TIGR00881 95 IFQGMGWPPCGRTVTKWFS-RSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIAIIVSLICFLLLRD 173 (379)
T ss_pred hhccccCCchHHHHHHhcC-HhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHheeeCC
Confidence 9999999999999999999 49999999999999999999999 577777778899999999988887766666655544
Q ss_pred CCCCCC----------C--------------CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc
Q psy14075 174 GVVKQE----------V--------------EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ 229 (414)
Q Consensus 174 ~~~~~~----------~--------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 229 (414)
++++++ + .+...++++|+|.++...+..++..........+.|.|+++.+|.++.+
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 253 (379)
T TIGR00881 174 SPQSCGLPPAEEMPNEEPDGDAEKKEEELTKKQIFLQYVLLNKVLWYISLGYVFVYVVRTGILDWSPLYLTQEKGFSKEK 253 (379)
T ss_pred CccccccCccccCcccccccccccccccccchHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHH
Confidence 321100 0 0012345678888888888888888888888899999999889999999
Q ss_pred hhhHhHHHHHHHHhhhhhhhhhhhhhh-hHHHHH-H-HHHHHHHHHHHhhh--hhhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075 230 QGVSFLPASISYLIGTNLFGPLGHRMG-RYLAAL-L-GLLIIGICLMMIPL--ARNINHLIVPNAGLGFAIGMVDSSMMP 304 (414)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~g~l~d~~~-~~~~~~-~-~~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~ 304 (414)
.+.......++.++++++.+++.||.. +|+... . ......++...... ..+........++.|+...... ..
T Consensus 254 ~~~~~~~~~~~~~~~~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~---~~ 330 (379)
T TIGR00881 254 ASWAFTLYELGGLVGTLLAGWLSDKLFNGRRGPLAVFFMALIIVSLLVYWLNPAANPLMDLICLFALGFLVYGPQ---ML 330 (379)
T ss_pred HHHHHHHHHHHcchhHHHHHHHHHHHcCCcchHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHHHHHhhhh---HH
Confidence 999999999999999999999999863 333222 1 22222222222222 1222333333344444332221 12
Q ss_pred hhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075 305 ELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWML 353 (414)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~ 353 (414)
......|..|++.|+++.|+.+....+|+.++|.+.|.+.|..||+..|
T Consensus 331 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~l~~~~g~~~~f 379 (379)
T TIGR00881 331 IGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGYLADGFGWAGAF 379 (379)
T ss_pred HHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHHHHHhhcccccC
Confidence 2234668888999999999999999999999999999999999987653
No 52
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=100.00 E-value=1e-33 Score=263.21 Aligned_cols=326 Identities=16% Similarity=0.100 Sum_probs=259.0
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 94 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (414)
.+.+|.+.+++|.|+++.|++.+.+.+++.+++++.|+++||+||||++.++.++..++.+.+ .+++++.+++.|++.|
T Consensus 20 ~~~lp~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~~~~g 98 (355)
T TIGR00896 20 GPLLPQIRSALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGTALIG 98 (355)
T ss_pred cccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHHHHHH
Confidence 456789999999999999999999999999999999999999999999999999988888887 7889999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc--CChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV--GKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
++.+...+....++.|++| ++|++++++.+...++|..+++.+++.+.++. +||+.|...++..++.........+
T Consensus 99 ~g~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~~~~~~~~~~~ 176 (355)
T TIGR00896 99 VGIAIINVLLPSLIKRDFP--QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALLALLAWIPQVR 176 (355)
T ss_pred HHHHHHhccchHHHHHhCc--chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999988888888999885 58999999999999999999999999888765 3999988777655443322211111
Q ss_pred CCCCCCC-CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhh
Q psy14075 173 PGVVKQE-VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL 251 (414)
Q Consensus 173 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l 251 (414)
+++++++ .++.+.++.+|+|.++...+..++....+.....++|.|+++ .|.+..+.+...+...++.++++++.|++
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~g~~~~~~g~~~~~~~~~~i~~~~~~g~l 255 (355)
T TIGR00896 177 RRVAANQTTTRLTPVRIWRSPLAWQVTVFFGLQSGLYYSLIGWLPAILIS-HGASAATAGSLLALMQLAQAASALLIPAL 255 (355)
T ss_pred cccCCCCCCCCCCCchhhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHH
Confidence 1111111 122346678899998877776677677777888899999987 69999999999999999999999999999
Q ss_pred hhhh-hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh-cccccchhhHHhHHHHHH
Q psy14075 252 GHRM-GRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD-IRHTAVYGSVYAIGDVAF 329 (414)
Q Consensus 252 ~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~g~~~~~~ 329 (414)
.||+ +||+.+..+..+.+++.+.+.+.++.... ...++.|++.+...+...+. ..+ ..++++++...++.+...
T Consensus 256 ~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~g~~~g~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~ 331 (355)
T TIGR00896 256 ARRVKDQRGIVAVLAVLQLVGLCGLLFAPMHGLW-AWALVLGLGQGGAFPLALTL---IGLRSRQAAQAAALSAMAQSIG 331 (355)
T ss_pred HhhhccchHHHHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhhhHhHHHHHH---HHHhccCHHHHHHHHHHHHHHH
Confidence 9999 46666667777777776666554433322 24566788877765544333 323 233566788999999999
Q ss_pred HHHHhHHHHHHHHHHhhhc
Q psy14075 330 CLGFAIGPAMSGTLVNTIG 348 (414)
Q Consensus 330 ~~g~~ig~~~~g~l~~~~g 348 (414)
+++..++|.+.|++.|+.|
T Consensus 332 ~~~~~~gp~~~G~l~~~~g 350 (355)
T TIGR00896 332 YLLAALGPLFVGVLHDISG 350 (355)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999887
No 53
>KOG2532|consensus
Probab=100.00 E-value=1.9e-34 Score=270.92 Aligned_cols=345 Identities=20% Similarity=0.232 Sum_probs=287.5
Q ss_pred hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhh
Q psy14075 22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR--TYGVLFLARSLQGIGSSC 99 (414)
Q Consensus 22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~ 99 (414)
..++++|..|-+++.+.++.|+.+++++.|+++||+|.|+++..+.++.++++++..++. +++.+++.|++||++.|.
T Consensus 65 ~~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~ 144 (466)
T KOG2532|consen 65 AGEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGV 144 (466)
T ss_pred CceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhH
Confidence 568999999999999999999999999999999999999999999999999999998875 456889999999999999
Q ss_pred hhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-cCChhHHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy14075 100 SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGLLQLLLLQPGVVKQ 178 (414)
Q Consensus 100 ~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (414)
.+|+...+.++|.|+ +||++..++...+..+|.+++-+++|.+.+. +||+.+|++.++++++..++.+.+..|++.++
T Consensus 145 ~~pa~~~i~~~W~P~-~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d~P~~h 223 (466)
T KOG2532|consen 145 LFPAIGSILAKWAPP-NERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSDSPSKH 223 (466)
T ss_pred HHhhhhceeeeECCH-HHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcCCcccC
Confidence 999999999999996 9999999999999999999999999999998 99999999999999999888887776554332
Q ss_pred C-------------------C--CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHH
Q psy14075 179 E-------------------V--EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPA 237 (414)
Q Consensus 179 ~-------------------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 237 (414)
+ + .+.+++++++++.+|...+..++.+.++..+..++|.|+++++|++..+.|++.++.
T Consensus 224 ~~is~~El~~I~~~k~~~~~~~~~~vP~~~i~ts~~vwai~~~~f~~~~~~~~l~~y~PtY~~~VL~f~v~~~G~~salP 303 (466)
T KOG2532|consen 224 PNISEKELKYIEKGKSEAHVKKKPPVPYKAILTSPPVWAIWISAFGGNWGFYLLLTYLPTYLKEVLGFDVRETGFLSALP 303 (466)
T ss_pred CCCCHHHHHHHHhcccccccCCCCCCCHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHhCCChhhhhHHHHHH
Confidence 1 1 234789999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhhhhhhhhh---------HHHHHHHHHHHHHHHHHhhhhhhhHH-HHHHHHHHHHHH-Hhhhhhhhhhh
Q psy14075 238 SISYLIGTNLFGPLGHRMGR---------YLAALLGLLIIGICLMMIPLARNINH-LIVPNAGLGFAI-GMVDSSMMPEL 306 (414)
Q Consensus 238 ~~~~~~~~~~~g~l~d~~~~---------~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~g~~~-~~~~~~~~~~~ 306 (414)
.+...+..++.|.++||..+ |..-.++....+++++.+.+.++... ..+.++....+. |...+....
T Consensus 304 ~l~~~~~k~~~g~lsD~l~~~~ls~t~~rkifn~i~~~~~ai~l~~l~~~~~~~~~~a~~~l~~~~~~~g~~~~Gf~~-- 381 (466)
T KOG2532|consen 304 FLAMAIVKFVAGQLSDRLTFRILSETTVRKIFNTIAFGGPAVFLLVLAFTSDEHRLLAVILLTIAIGLSGFNISGFYK-- 381 (466)
T ss_pred HHHHHHHHHHHHHHHHHHhhccCchHhHHHHHHhHHHHHHHHHHHeeeecCCCcchHHHHHHHHHHHHcccchhhhHh--
Confidence 99999999999999998754 33445667777777777777653222 222222222222 222121221
Q ss_pred hhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh---hhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 307 GYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN---TIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 307 ~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~---~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
...+. .++..+..+|+.+....+.+.++|.+.|.+.. ...|+.+|.+.+++.+++.++..++-
T Consensus 382 -~~~~~-apq~a~~l~g~~~~~~~~~~~~~P~~vg~~~~~~t~~eW~~VF~i~a~i~~~~~i~f~~f~ 447 (466)
T KOG2532|consen 382 -NHQDI-APQHAGFVMGIINFVGALAGFIAPLLVGIIVTDNTREEWRIVFLIAAGILIVGNIIFLFFG 447 (466)
T ss_pred -hhhhc-cchHHHHHHHHHHHHHHHHHHHHHHheeeEeCCCCHHHHHHHHHHHHHHHHHhchheeEee
Confidence 12222 35566999999999999999999999999983 34699999999999888886665554
No 54
>PRK10054 putative transporter; Provisional
Probab=100.00 E-value=1.1e-33 Score=265.92 Aligned_cols=343 Identities=13% Similarity=0.065 Sum_probs=269.8
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSS 98 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 98 (414)
+.+.+++|.|+.++|++.+.+.+++.+++++.|+++||+|||+++.++.++..++.++.+++++++.+++.|.+.|.+.+
T Consensus 32 ~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 111 (395)
T PRK10054 32 IYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFASGFIAIPLVNNVTLVVLFFALINCAYS 111 (395)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 34567899999999999999999999999999999999999999999999999999999999999999999999998888
Q ss_pred hhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC-CC
Q psy14075 99 CSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV-VK 177 (414)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~-~~ 177 (414)
...+...++..|.+|+ ++|++++++.....++|..++|++++.+.+ .+|+.+|++.++..++..+...+..++++ ++
T Consensus 112 ~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~~~f~~~~~~~~i~~i~~~~~~~~~~~~~ 189 (395)
T PRK10054 112 VFSTVLKAWFADNLSS-TSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSINLPFWLAAICSAFPLVFIQIWVQRSEKAI 189 (395)
T ss_pred HHHHHHHHHHHHhcCH-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccCcHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 8888889999999994 899999999999999999999999998885 79999999988887776555554443322 21
Q ss_pred CCC--CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHH--hCCCccchhhHhHHHHHHHHhhhhhhhhhhh
Q psy14075 178 QEV--EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDT--MGADKWQQGVSFLPASISYLIGTNLFGPLGH 253 (414)
Q Consensus 178 ~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d 253 (414)
+++ +..+.++.+|||+++...+..++..........+.+.|..+. .+.+....+.......+.........+++.|
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~ 269 (395)
T PRK10054 190 ATETGSVWSPSVLLQDKALLWFTCSGFLASFVSGAFASCISQYVMVVADSDFAEKVVAVVLPVNAAMVVSLQYSVGRRLN 269 (395)
T ss_pred ccchhhhhhhhhhccCceehHHHHHHHHHHHHHHHhhhhHHHHHHHhcccchHHHHHHHHHHhhhhheeeehhHHHHHHc
Confidence 111 112336778899888777777776666666666777776543 3455556677777777777777788899999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHH
Q psy14075 254 RMGRYLAALLGLLIIGICLMMIPLA-RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLG 332 (414)
Q Consensus 254 ~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 332 (414)
|.++|+.+..+..+..++.+.+... ++.+.+.+...+.+++.+...+... +...+..|++.+++.++..+ ...+|
T Consensus 270 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~p~~~---~~~~~~~p~~~~~~~~~~~~-~~~~G 345 (395)
T PRK10054 270 AANIRPLMTAGTLCFVIGLVGFIFSGNSLLLWGMSAAVFTVGEIIYAPGEY---MLIDHIAPPGMKASYFSAQS-LGWLG 345 (395)
T ss_pred cCCchhHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHhhHH---HHHHHhCCcccceehHhHHH-HHHHH
Confidence 9999998888888888777666553 4555555667777777766544333 33556677888899888654 66789
Q ss_pred HhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy14075 333 FAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLL 367 (414)
Q Consensus 333 ~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 367 (414)
..+||.++|.+.|+.|+...|.+.+.+..+..++.
T Consensus 346 ~~~Gp~~~G~l~~~~g~~~~~~~~~~~~~~~~~~~ 380 (395)
T PRK10054 346 AAINPLVSGVILTTLPPWSLFVILALAIVAAWLLM 380 (395)
T ss_pred HHHHHHHHHHHHHHcChhhHHHHHHHHHHHHHHHH
Confidence 99999999999999999888877665555544433
No 55
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=100.00 E-value=2.8e-33 Score=262.45 Aligned_cols=338 Identities=14% Similarity=0.043 Sum_probs=274.6
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhH----HHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPM----FTGFVIMFLSTLIFAFGRTYGVLFLARSL 92 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l----~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 92 (414)
.+|.+.+++|.|.+++|++.+.+.+...++++++|+++||+|||+.. ..+..++.+ ..+..+++++.+++.|++
T Consensus 26 ~l~~~l~~~g~s~~~ig~~~s~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~l~~~~~l 103 (382)
T TIGR00902 26 FFPAWLKGIGLGEEMIGLLIGAALIARFAGGLFFAPLIKDANHIIIALRLLALASAIFAA--AFSAGAHNAWLLFIAIGL 103 (382)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHH--HHHHhhhhHHHHHHHHHH
Confidence 35788899999999999999999999999999999999999985433 222222222 244467899999999999
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
+|.+.+...|...++..++ +++|++.+|......++|.+++|++++.+.+++|||..|++......+ .+......|
T Consensus 104 ~~~~~~~~~p~~~al~~~~---~~~~~~~~g~~~~~~slG~~~g~~l~g~l~~~~g~~~~f~~~~~~~~~-~~~~~~~~~ 179 (382)
T TIGR00902 104 FALFFSAGMPIGDALANTW---QKQFGLDYGKVRLIGSAAFIIGSALFGGLIGMFDEQNILAILTAGLAF-MLIGFLIKP 179 (382)
T ss_pred HHHHHccchhHHHHHHHHH---HHHcCCCccHHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHH-HHHHHHcCC
Confidence 9999988889888887654 368999999999999999999999999999999999999887765333 233333333
Q ss_pred CC-CCCCC-----CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhh
Q psy14075 173 PG-VVKQE-----VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTN 246 (414)
Q Consensus 173 ~~-~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 246 (414)
+. +++++ ++.++.++++|+|+++...+..++..........+.|.|+++ .|.++.+.|.......++.+++..
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~-~g~s~~~~g~l~~~~~~~~i~~~~ 258 (382)
T TIGR00902 180 TIPPKDAIPEDESQGDSAFIALLKNPMNLRFLAAVCLIQGAHAAYYGFSAIYWQA-AGISASATGLLWGIGVLAEIIIFA 258 (382)
T ss_pred CCCCCccccccccccchhHHHHHcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHH
Confidence 21 21111 112346788999999998888888888888889999999987 799999999999999999999999
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHH
Q psy14075 247 LFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGD 326 (414)
Q Consensus 247 ~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 326 (414)
+.+++.||+++|+.+.++.+...+....+.+.++.+.++...++.|+..+...+.. ..++.+. |++++++..++++
T Consensus 259 ~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~~~~~~~---~~~i~~~-~~~~~~~~q~~~~ 334 (382)
T TIGR00902 259 FSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFAVCHLAA---MRYIAAQ-PGSEIAKLQALYN 334 (382)
T ss_pred HhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHHHHHHHH---HHHHHhC-CHhhHHHHHHHHH
Confidence 99999999999999999999999999888888888888888999999999886553 3445555 7888899999976
Q ss_pred -HHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075 327 -VAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366 (414)
Q Consensus 327 -~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 366 (414)
....+|..++|.+.|++.|++|+ ..|...+.+.+++.++
T Consensus 335 ~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 335 ALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 45679999999999999999986 6677777777665444
No 56
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=100.00 E-value=8.6e-35 Score=270.05 Aligned_cols=317 Identities=27% Similarity=0.422 Sum_probs=256.4
Q ss_pred cch-hhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 17 ARE-NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 17 ~~~-~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
..| .+.+++|.|+.+++++.+.+.++..+++++.|+++||+||||++..+.++.+++.++..++++++.+++.|++.|+
T Consensus 18 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~ 97 (352)
T PF07690_consen 18 ALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFASNFWLLLIARFLLGI 97 (352)
T ss_dssp HHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhhhhHHHHhhhcccccc
Confidence 346 7889999999999999999999999999999999999999999999999999997777777888899999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+...+++.|++|+ ++|++++++.+...++|..++|.+++.+.++.+||+.|++.+++.++..++...+.++++
T Consensus 98 ~~~~~~~~~~~~i~~~~~~-~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~ 176 (352)
T PF07690_consen 98 GSGFFSPASNALIADWFPP-EERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAILSLIAAILFILFLPEPP 176 (352)
T ss_dssp HHHHHHHHHHHHHHHCCCT-CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHHHHHHHHHHHHCCC---S
T ss_pred ccccccccccccccccchh-hhhhhccccccchhhhhhhcccchhhhhhhccccccccccccchhhhhhhhHhhhhhhcc
Confidence 9999999999999999994 999999999999999999999999999998899999999999999888775333332222
Q ss_pred --CCCCCCCc----------h-hhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCC-ccchhhHhHHHHHHH
Q psy14075 176 --VKQEVEPP----------T-LKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGAD-KWQQGVSFLPASISY 241 (414)
Q Consensus 176 --~~~~~~~~----------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~~~g~~~~~~~~~~ 241 (414)
++++++.+ + ++.++++|.+|......++..........+.|.|+++.+|.+ ..+.+.......+..
T Consensus 177 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 256 (352)
T PF07690_consen 177 PPRERESPKESESKKPKPLKPGFKSLFKNPVLWILLIAFFLFFFVFSGFSFFLPLYLQEVLGFSGPSQAGLLFSIFGIVG 256 (352)
T ss_dssp TTTT--SSTTTT--HHHCCCH-CTHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCTHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccccccccccccchhhhhhhhhhHHHHHHHHhhcccchhhhhccCCCHHHHHHHHHHHHHHHH
Confidence 11111111 1 455666666664555555555677778899999978889999 788999999999999
Q ss_pred HhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh---hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075 242 LIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA---RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY 318 (414)
Q Consensus 242 ~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (414)
+++.++.+++.||+++++..........+..+.+... ++........++.|++.+...+... ....+..|++++
T Consensus 257 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~ 333 (352)
T PF07690_consen 257 IIGSLLAGRLSDRFGRRRRLLIAILLLILGALGLLLLPFSSSPVWLIIALFLIGFGFGIVFPILF---SLIQELVPPEYR 333 (352)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCSHHHCHHHHHHHHHHHHHHHHHHHCHHHH---HHHHCCCHTCHH
T ss_pred HHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCCHHHH
Confidence 9999999999999998776666666665555544433 2345555667778888777755444 346688888999
Q ss_pred hhHHhHHHHHHHHHHhHHH
Q psy14075 319 GSVYAIGDVAFCLGFAIGP 337 (414)
Q Consensus 319 g~~~g~~~~~~~~g~~ig~ 337 (414)
|++.|+.+...++|..++|
T Consensus 334 g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 334 GTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCC
Confidence 9999999999999999987
No 57
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.7e-34 Score=255.66 Aligned_cols=348 Identities=17% Similarity=0.155 Sum_probs=293.3
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhH---HHHHHHHHHHhh
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTY---GVLFLARSLQGI 95 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~---~~l~~~r~l~G~ 95 (414)
+.+.+|+|+|+.|.+++.+...+...+..++.|.+.||+|.|++..++.++..+-.+..+++.++ |++++.+++.|+
T Consensus 38 ~~i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP~~~~~~a~~~~~~~~ll~~gll~G~ 117 (417)
T COG2223 38 VFIKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIPCLGLAFAVTYPSTWQLLVIGLLLGL 117 (417)
T ss_pred hhhccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHhc
Confidence 56679999999999999999999999999999999999999999999999999999999987654 599999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC---ChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG---KTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g---w~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
+.+ .+....+.+++|+|+ |++|.++|+.. ..|+|..+...++..+....+ ||....+..+..++..+..++..+
T Consensus 118 ~Ga-sFav~m~~~s~~fP~-~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g~~~w~~~~~i~~~~l~v~~v~~~~~~~ 194 (417)
T COG2223 118 AGA-SFAVGMPNASFFFPK-EKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFGFLAWRNVAGIYVVALAIAAVLAWLGMN 194 (417)
T ss_pred ccc-eehcccccccccCCh-hhhhHHHHHhc-cccccHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 755 556678999999995 99999999999 999999999999999998888 999999999998888888888887
Q ss_pred CCCCCCCC---CC-chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhh
Q psy14075 173 PGVVKQEV---EP-PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLF 248 (414)
Q Consensus 173 ~~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~ 248 (414)
+.++.++. .. .+.+.++++|+.|.+.+.++..+.++.++..++|.|+++++|.++.++|.......+.+.+.++++
T Consensus 195 d~p~~r~~~~~~~~~~~~~v~~~~~~W~lsllY~~tFG~Fvgfs~~l~~~~~~~fg~~~~~Ag~~a~~f~~~g~l~Rp~G 274 (417)
T COG2223 195 DVPEHRASVKPQLPAQLKAVFSNKDTWLLSLLYFATFGGFVGFSAYLPMYLVTQFGLSPVTAGLIAFLFPLIGALARPLG 274 (417)
T ss_pred CChhhhccccccchhHHHHHhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChhhHHHHHHHHHHHHHHHHhcc
Confidence 76553221 12 346678899999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-------hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhH
Q psy14075 249 GPLGHRMGRYLAALLGLLIIGICLMMIPLAR-------NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV 321 (414)
Q Consensus 249 g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (414)
|+++||+|.+|.+...+..++++........ +........+..++..|....... ..+...+| ++.|.+
T Consensus 275 G~LsDR~Gg~rv~~~~f~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~l~l~~~~G~GnGsvf---k~Ip~if~-~~~G~v 350 (417)
T COG2223 275 GWLSDRIGGRRVTLAVFVGMALAAALLSLFLTGFGHGGSFVVFVAVFLALFVFAGLGNGSVF---KMIPVIFP-KETGAV 350 (417)
T ss_pred chhhhhccchhHHHHHHHHHHHHHHHHHccccccccCcchHHHHHHHHHHHHHhccCcchhe---eechHHHH-hhhhHH
Confidence 9999999999999888888888776665542 233334444445555555533323 22334443 456999
Q ss_pred HhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 322 YAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 322 ~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
.|+....+.+|+..-|...|...+.+| +..+|++...+.+++.++.+..+.+
T Consensus 351 ~G~vga~G~lGGf~lp~~~g~~~~~tg~~~~~f~~~~~~~~~a~v~~~~~y~r 403 (417)
T COG2223 351 TGIVGAIGGLGGFFLPLAFGVSLDLTGSYTGAFMLLLAFYLVALVLTWALYAR 403 (417)
T ss_pred HHHHHHhccccccchhHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999999999999 9999999988888888777665543
No 58
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=100.00 E-value=9.2e-34 Score=274.30 Aligned_cols=343 Identities=16% Similarity=0.081 Sum_probs=246.8
Q ss_pred hcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh------------hhHHHHHHHHHH
Q psy14075 25 LMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG------------RTYGVLFLARSL 92 (414)
Q Consensus 25 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------------~~~~~l~~~r~l 92 (414)
++.++.+.+++.+.+.++..++++++|+++||+||||+++++.+++.++.++++++ ++++.+++.|++
T Consensus 50 ~~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l 129 (479)
T PRK10077 50 ESAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRII 129 (479)
T ss_pred ccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHH
Confidence 38899999999999999999999999999999999999999999999998888763 235778899999
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh--------hhcCChhHHHHHHHHHHHHH
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY--------QFVGKTAPFLILSALALGDG 164 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~gw~~~f~~~~~~~~~~~ 164 (414)
+|++.|...+...++++|++|+ ++|++++++.+.+..+|..+++.++..+. +..|||+.|++.++..++..
T Consensus 130 ~G~~~g~~~~~~~~~i~e~~~~-~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~~ 208 (479)
T PRK10077 130 GGIGVGLASMLSPMYIAEIAPA-HIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLFL 208 (479)
T ss_pred HhhhHhHHhhHHHHHHHhhCCh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHHH
Confidence 9999999999999999999995 99999999999999999999987766543 35689999999888887765
Q ss_pred HHHHHhccCCCCC----CCCCC------------------chhhhhcc-----ChHHHHH-----H----HHHHHHHHHH
Q psy14075 165 LLQLLLLQPGVVK----QEVEP------------------PTLKSLVM-----DPYILIA-----A----GAITFANTGI 208 (414)
Q Consensus 165 ~~~~~~~~~~~~~----~~~~~------------------~~~~~~~~-----~~~~~~~-----~----~~~~~~~~~~ 208 (414)
+..+ +.||+++. ++.++ .+.++..+ .+..+.. . ...+......
T Consensus 209 ~~~~-~l~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (479)
T PRK10077 209 MLLY-FVPETPRYLMSRGKQEQAEGILRKIMGNTLATQALQEIKHSLDHGRKTGGKLLMFGVGVIVIGVMLSVFQQFVGI 287 (479)
T ss_pred HHHH-cCCCCcHHHHHcCCHHHHHHHHHHHcCChhHHHHHHHHHHHHHHhhhhhhhhcchhHHHHHHHHHHHHHHHHhCh
Confidence 5544 44554321 00000 00111111 0111100 0 0011111122
Q ss_pred HhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--hhH--HH
Q psy14075 209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NIN--HL 284 (414)
Q Consensus 209 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~--~~ 284 (414)
.....+.|.+.++ .|.+.....+.....++..+++.++.++++||++||+.+..+..+.+++.+.+.... +.. ..
T Consensus 288 ~~~~~~~p~i~~~-~g~~~~~~~~~~~~~~~~~~i~~~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~~~~~~~~~~~~ 366 (479)
T PRK10077 288 NVVLYYAPEIFKT-LGASTDIALLQTIIVGVINLTFTVLAIMTVDKFGRKPLQIIGALGMAIGMFSLGTAFYTQAPGIVA 366 (479)
T ss_pred hHHHHHHHHHHHH-cCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHhcChHHHHHhHHHHHHHHHHHHHHHhcCcccHHH
Confidence 2334455766555 688877777777788889999999999999999999999999998888876665432 111 12
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH------hhhchHHHHHHHHH
Q psy14075 285 IVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV------NTIGFEWMLFIIAI 358 (414)
Q Consensus 285 ~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~------~~~g~~~~~~~~~~ 358 (414)
....++.+.+.+.... +.......|.+|++.|+++.|+.+...+++..+++.+.+.+. |..++...|++.++
T Consensus 367 ~~~~~~~~~~~~~~~~--~~~~~~~~e~~p~~~r~~~~g~~~~~~~~g~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 444 (479)
T PRK10077 367 LLSMLFYVAAFAMSWG--PVCWVLLSEIFPNAIRGKALAIAVAAQWIANYFVSWTFPMMDKNSWLVAHFHNGFSYWIYGC 444 (479)
T ss_pred HHHHHHHHHHHhcccc--chhHHHhHhhCChhHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccchhhhccCccHHHHHHH
Confidence 2233344444433221 222345678889999999999999999999999987776544 56778888888777
Q ss_pred HHHHHHHHHHHhcC
Q psy14075 359 LDFMYAPLLYLLRN 372 (414)
Q Consensus 359 ~~~~~~~~~~~~~~ 372 (414)
..+++.++.+.+.+
T Consensus 445 ~~~~~~~~~~~~~~ 458 (479)
T PRK10077 445 MGVLAALFMWKFVP 458 (479)
T ss_pred HHHHHHHHHHhccc
Confidence 76766665554443
No 59
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=100.00 E-value=1.1e-33 Score=269.92 Aligned_cols=351 Identities=13% Similarity=0.080 Sum_probs=263.1
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh----hhHHHHHHHHHHH
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG----RTYGVLFLARSLQ 93 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~~~~~l~~~r~l~ 93 (414)
.|.+++ +|.|+++.+++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.++.++. ++++.+.+.|++.
T Consensus 50 ~p~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~ 128 (438)
T TIGR00712 50 MPYLVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMFVLLFLN 128 (438)
T ss_pred hHHHHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHHHHHHHH
Confidence 455554 69999999999999999999999999999999999999999999999998887764 5678888999999
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh-hhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY-QFVGKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~-~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
|++.+..++.....+.|++|+ ++|++++++.+...++|..+++.+.+... ++.+||..|++.+++.++..+..+++.+
T Consensus 129 g~~~g~~~~~~~~~i~~~~~~-~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~~~~~~~~~ 207 (438)
T TIGR00712 129 GWFQGMGWPPCGRTMVHWWSQ-SERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVALFAFAMMR 207 (438)
T ss_pred HHHhhcchHHHHHHHHHhcCc-ccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999988888999999995 99999999999999999999988877644 4579999999999988887666666555
Q ss_pred CCCCCC---------C--------CCCc--hh-----hhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc
Q psy14075 173 PGVVKQ---------E--------VEPP--TL-----KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW 228 (414)
Q Consensus 173 ~~~~~~---------~--------~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 228 (414)
|++++. + +++. +. +..+|++.++...+..++.......+..+.|.|+++..|+++.
T Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~g~s~~ 287 (438)
T TIGR00712 208 DTPQSCGLPPIEEYRNDYPDDYNEKAEQELTAKEIFMQYVLPNKLLWYIAIANVFVYLLRYGVLDWSPTYLKEVKHFALD 287 (438)
T ss_pred CCHHhcCCCCchhcccccccccccccccccchHHHHHHHHccCchHHHHHHHHHHHHHHHHHHHHhHHHHHHHccCCChh
Confidence 432210 0 0000 11 1367888888887777777777778888999999998899999
Q ss_pred chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHH---HHHHHHhhhh--hhhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075 229 QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLII---GICLMMIPLA--RNINHLIVPNAGLGFAIGMVDSSMM 303 (414)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~---~i~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~ 303 (414)
++++......+.++++.++.|++.||+++++....+.... .++.+.+... .+.+......+..|++ ...+. .
T Consensus 288 ~~~~~~~~~~~~~~ig~~~~g~l~dr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~~~~~-~ 364 (438)
T TIGR00712 288 KSSWAYFLYEYAGIPGTLLCGWMSDKVFKGNRGATGVFFMTLVTIAVIVYWMNPAGNPLVDMICMIVIGFL--IYGPV-M 364 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHHHHHHH--HccHH-H
Confidence 9999999999999999999999999995432212222211 1222222221 1222222222333332 22111 1
Q ss_pred hhhhhhhhcccccchhhHHhHHHHHHHHHH-hHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 304 PELGYLVDIRHTAVYGSVYAIGDVAFCLGF-AIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
.......+..|++.||++.|+.+...++|+ .++|.+.|.+.|+.||+.++.+..++.+++.+..+.+.++
T Consensus 365 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 435 (438)
T TIGR00712 365 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGYTVDFFGWDGGFMVMIGGSILAVILLIVVMIG 435 (438)
T ss_pred HHHHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHhh
Confidence 111235578888899999999998888875 6899999999999999999988888777777666655443
No 60
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=100.00 E-value=1.8e-32 Score=261.97 Aligned_cols=351 Identities=20% Similarity=0.229 Sum_probs=289.9
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh-----hhhHHHHHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF-----GRTYGVLFLARS 91 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~-----~~~~~~l~~~r~ 91 (414)
+.+.+..+..-|+..++++.++..+...+.++++|.++||++|||+++.+.++.++..+..++ ..+.|.+++.-+
T Consensus 32 a~~wlv~~lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~~~~~~~~~L~~l~~~~~~~~~~Ll~~~f 111 (524)
T PF05977_consen 32 ALAWLVTQLTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQLLRALVALLLAVLAFFGLLSPWLLLILTF 111 (524)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHHHHHHHHHHHHHHHHhCcCCHHHHHHHHH
Confidence 456667778889999999999999999999999999999999999999999887766555443 247889999999
Q ss_pred HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhc
Q psy14075 92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLL 171 (414)
Q Consensus 92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~ 171 (414)
+.|++.+...|+.++++.|..| +++..+++++.+...++..++||.++|.+...+|-.+.|.+.++..++.........
T Consensus 112 l~g~~~a~~~PA~~A~ip~lV~-~~~L~~A~al~s~~~niar~iGPalgG~Lva~~G~~~~f~inalsfl~~i~~l~~~~ 190 (524)
T PF05977_consen 112 LLGIGSAFFNPAWQAIIPELVP-KEDLPAANALNSISFNIARIIGPALGGILVAFFGAAAAFLINALSFLISILALLRWK 190 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHhcc-HhhHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcc
Confidence 9999999999999999999999 599999999999999999999999999999999999999999988777655555444
Q ss_pred cCCCCCCCCCC-------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhh
Q psy14075 172 QPGVVKQEVEP-------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIG 244 (414)
Q Consensus 172 ~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 244 (414)
++.++++.+++ ..++-+.++|.+.......++.++....+...+|.+.++.+|.++...|++.+..+++.++|
T Consensus 191 ~~~~~~~~~~e~~~~~l~~G~ryv~~~~~l~~~l~~~~~~~l~~~a~~aLlPl~a~~~l~~~a~~yGll~a~~gvGai~G 270 (524)
T PF05977_consen 191 PPPPPSSLPRERFFSALREGLRYVRSSPPLRSVLLRSFLFNLFASAVWALLPLFARDVLGGGASGYGLLLAAFGVGAILG 270 (524)
T ss_pred ccccccccchhhhhhhHHHHHHHHhcchHHHHHHHHHHHHHHhhhHHHHhhhHHHHHHhCCcHHHHHHHHHHHHHHHHHH
Confidence 43322221111 12333455676665555555555555666778999999999999999999999999999999
Q ss_pred hhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhH
Q psy14075 245 TNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAI 324 (414)
Q Consensus 245 ~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~ 324 (414)
.++.+++.+|+++++++..+.++.+++++.+.+.++.+...+..++.|++.........+ ......|++.||+++++
T Consensus 271 al~~~~l~~~~~~~~lv~~~~~~~a~~~~~lal~~~~~~~~~~l~l~G~~~~~~~~~~~t---~~Q~~~P~~~~GRv~si 347 (524)
T PF05977_consen 271 ALLLPRLRRRLSSRRLVLLASLLFALALLLLALSPSFWLALIALFLAGAAWIIANSSLNT---LVQLSVPDWVRGRVFSI 347 (524)
T ss_pred HHHHHHhhcccCcchhhHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhCCHHHHhHHHHH
Confidence 999999999999988888899999998888899888888777888888887776544443 35577789999999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 325 GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 325 ~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
+++....+..+|..+.|.+.|.+|.+.++.+.++..+++.++....+
T Consensus 348 ~~~~~~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~~~~~ 394 (524)
T PF05977_consen 348 YQMVFFGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIALRFP 394 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999999999998887777666666655443
No 61
>TIGR00898 2A0119 cation transport protein.
Probab=100.00 E-value=2.8e-33 Score=272.53 Aligned_cols=343 Identities=16% Similarity=0.091 Sum_probs=262.9
Q ss_pred cchhhhhhhcCC---cchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy14075 17 ARENRHKYLMGE---TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ 93 (414)
Q Consensus 17 ~~~~~~~~~g~s---~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 93 (414)
..|.+.+|++++ +.+.+++.+++.++..+++++.|+++||+|||+++.++.++.+++.+++++++|++.+++.|++.
T Consensus 111 ~~~~i~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~ 190 (505)
T TIGR00898 111 FSSTIVTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLV 190 (505)
T ss_pred ccccEEEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHH
Confidence 457788999999 89999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQP 173 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 173 (414)
|++.+...+...+++.|++|+ ++|+++.++...+..+|.++++.++..+.+ ||+.|++.++..++..+..++ .||
T Consensus 191 G~~~~~~~~~~~~~~~e~~~~-~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~-~~e 265 (505)
T TIGR00898 191 GMGIGGIWVQAVVLNTEFLPK-KQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWF-VPE 265 (505)
T ss_pred HhhccchHHHHHHHhheecCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHh-cCC
Confidence 999999999999999999994 999999999999999999999998876654 999999999888777666544 443
Q ss_pred CCCC-----------------------------------C----CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhc
Q psy14075 174 GVVK-----------------------------------Q----EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPS 214 (414)
Q Consensus 174 ~~~~-----------------------------------~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (414)
+++. + ++++.++++++|+|+++...+...+.++........
T Consensus 266 sp~~l~~~~~~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (505)
T TIGR00898 266 SPRWLISQGRIEEALKILQRIAKINGKKLPAEVLSLSLEKDLSSSKKQYSFLDLFRTPNLRKTTLCLMMLWFTTAFSYYG 345 (505)
T ss_pred ChHHHHHCCCHHHHHHHHHHHHHHcCCCCCHHHHhhhhhhhhhhccCCCcHHHHhCChHHHHHHHHHHHHHHHHHHHHHH
Confidence 2210 0 001124567888888776655554444433333223
Q ss_pred hHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh--HHHHHHHHHHH
Q psy14075 215 LPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNI--NHLIVPNAGLG 292 (414)
Q Consensus 215 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~--~~~~~~~~~~g 292 (414)
++.+..+ ++.+. .......++..+++.++.+++.||+|||+.+..+.++.+++++.+.+.++. +......++.+
T Consensus 346 ~~~~~~~-~~~~~---~~~~~~~~~~~i~~~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 421 (505)
T TIGR00898 346 LVLDLGN-LGGNI---YLDLFISGLVELPAKLITLLLIDRLGRRYTMAASLLLAGVALLLLLFVPVDLYFLRTALAVLGK 421 (505)
T ss_pred Hhccccc-cCCCh---HHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcCCCchHHHHHHHHHHH
Confidence 3333322 34442 233445567888899999999999999999999988888887777665543 33333344444
Q ss_pred HHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 293 FAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
++.+...+ ....+..|.+|++.|+++.|+.+....+|+.++|.+.+ + +..++...+.+.+++.+++.+..+++++
T Consensus 422 ~~~~~~~~---~~~~~~~e~~p~~~r~~~~g~~~~~~~ig~~i~p~i~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~lpe 496 (505)
T TIGR00898 422 FGITSAFQ---MVYLYTAELYPTVVRNLGVGVCSTMARVGSIISPFLVY-L-GEKWLFLPLVLFGGLALLAGILTLFLPE 496 (505)
T ss_pred HHHHHHHH---HHHHHhcccccHHHHhhhHhHHHHHHHHHHHHHhHHHH-H-HHHHHhhHHHHHHHHHHHHHHHHHcCcC
Confidence 44444433 23345679999999999999999999999999999998 3 4456667777777777777666666654
Q ss_pred C
Q psy14075 373 P 373 (414)
Q Consensus 373 ~ 373 (414)
.
T Consensus 497 t 497 (505)
T TIGR00898 497 T 497 (505)
T ss_pred C
Confidence 3
No 62
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=100.00 E-value=2.2e-33 Score=271.45 Aligned_cols=351 Identities=17% Similarity=0.102 Sum_probs=260.1
Q ss_pred cchhhhhhhcCC--------cchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh---hhHHH
Q psy14075 17 ARENRHKYLMGE--------TKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG---RTYGV 85 (414)
Q Consensus 17 ~~~~~~~~~g~s--------~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~ 85 (414)
..|.+..+++.+ ..+.+++.+.+.++..++++++|+++||+|||++++.+.++++++.+++.+. .+++.
T Consensus 50 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (481)
T TIGR00879 50 ALALPAFEFKFTSANSDSYSSSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEM 129 (481)
T ss_pred hhhcHHHHHhcCCcccCCCChhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHH
Confidence 345666777666 8999999999999999999999999999999999999999999999998554 45668
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhh---hHhhhhcCChhHHHHHHHHHHH
Q psy14075 86 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG---GIMYQFVGKTAPFLILSALALG 162 (414)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~---~~l~~~~gw~~~f~~~~~~~~~ 162 (414)
+++.|+++|++.+...+...+++.|++|+ ++|++++++.+.+.++|..+++.++ ....+..+||+.|++.++..++
T Consensus 130 ~~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~ 208 (481)
T TIGR00879 130 LIVGRVLLGIGVGIASALVPMYLSEIAPK-ALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGL 208 (481)
T ss_pred HHHHHHHHHhhhhHHHhHHHHHHHccCCh-hhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHH
Confidence 99999999999999999999999999995 9999999999999999999999999 6666778999999997666655
Q ss_pred HHHHHHHhccCCCC-----CC-C-------------CCCch----------------------hhhhcc------ChHHH
Q psy14075 163 DGLLQLLLLQPGVV-----KQ-E-------------VEPPT----------------------LKSLVM------DPYIL 195 (414)
Q Consensus 163 ~~~~~~~~~~~~~~-----~~-~-------------~~~~~----------------------~~~~~~------~~~~~ 195 (414)
..+..++ .+|+++ ++ + ++... +++.++ .+.++
T Consensus 209 ~~~~~~~-l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (481)
T TIGR00879 209 LFLGLFF-LPESPRWLVGKGRVEEARKSLARLRGTSGEDKELLDELELIDIKRSIEKRSVQPSWGSLFSSTRRIRRRLFL 287 (481)
T ss_pred HHHHHhc-CCCChHHHHHcCChHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHhhccccHHHHHhcCchhHHHHHH
Confidence 5444443 333321 00 0 00000 011121 12222
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075 196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~ 275 (414)
...+..+...........+.|.+.++ .|++..+.+.......++.+++.++.+++.||++||+.+..+..+..++.+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~~~~~~~ 366 (481)
T TIGR00879 288 GVVLQWFQQFTGINAIMYYSPTIFEN-AGVSTDHAFLVSIIVGAVNFAFTFVAIFLVDRFGRRPLLLIGAAGMAICLFVL 366 (481)
T ss_pred HHHHHHHHHHhCCeehHHHHHHHHHH-cCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHH
Confidence 22333333333334455566766655 69998888888889999999999999999999999999888888777776665
Q ss_pred hhh-----hh-----hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh
Q psy14075 276 PLA-----RN-----INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN 345 (414)
Q Consensus 276 ~~~-----~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~ 345 (414)
... ++ ........++.+.+.+..... .......|..|++.|+++.|+.+...++|.+++|.+.+.+.+
T Consensus 367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~~~~ 444 (481)
T TIGR00879 367 GILGASFVTGSSKSSGNVAIVFILLFIAFFAMGWGP--VPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPTMLE 444 (481)
T ss_pred HHHhhcccCCcccchhHHHHHHHHHHHHHHHccccC--eehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 521 10 122222333333333333221 112235688889999999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 346 TIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
+.|++..|++.+++++++.++.++..+
T Consensus 445 ~~~~~~~f~~~~~~~~~~~i~~~~~~~ 471 (481)
T TIGR00879 445 SIGVGGVFIFFGGLNVLGLIFVYFFLP 471 (481)
T ss_pred hcCccceehhHHHHHHHHHHHHheecc
Confidence 999999999888888777776655443
No 63
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=100.00 E-value=4.9e-32 Score=255.52 Aligned_cols=330 Identities=19% Similarity=0.231 Sum_probs=257.5
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
+..|.+.+++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+++..+.++..++.+++.++++++.+++.|++.|+
T Consensus 29 p~~~~i~~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~ 108 (394)
T PRK11652 29 PAIADMARDLNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVALFAHSLTVLIAASAIQGL 108 (394)
T ss_pred ccHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHh
Confidence 34688999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
+.+...+....+..|+++ +++|+++++..+.+..++..++|.+++.+.++.|||+.|++.++..++..+...+..||++
T Consensus 109 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~~~~~~~~~~~~~~~~~~~~ 187 (394)
T PRK11652 109 GTGVGGVMARTLPRDLYE-GTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFLLLLGAGVTFSMARWMPETR 187 (394)
T ss_pred hhhHHHHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHHHHHHHHHHHHHHHhCCccC
Confidence 999888888889999998 4899999999999999999999999999999899999999998877766655555555543
Q ss_pred CCCCCC---CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhh
Q psy14075 176 VKQEVE---PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG 252 (414)
Q Consensus 176 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 252 (414)
++++++ .+++++.+|+|+++...+..+........+..+.+.++++.+|.++.+.++......++.+++..+.+++.
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~l~ 267 (394)
T PRK11652 188 PADARRTRVLASYRTLLSNRRFNCYLLMLIGTLAGIAVFEACSGVLMGAVLGLSSMTVSILFILPIPAAFFGAWFAGRPN 267 (394)
T ss_pred ccccchhHHHHHHHHHHcChHHHHHHHHHHHHHHHHHHHHHhChHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 322221 23456778898887666555555555566667778888888899999999988888888999999999999
Q ss_pred hhhhhHHHHHHH-HHHHHHHHHHhhh--hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHH
Q psy14075 253 HRMGRYLAALLG-LLIIGICLMMIPL--ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAF 329 (414)
Q Consensus 253 d~~~~~~~~~~~-~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 329 (414)
||.+++...... .....+....... ..+.+......++.+++.+...+..... ..+..| +.+|++.++.+...
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~-~~~g~~~~~~~~~~ 343 (394)
T PRK11652 268 KRFSTLMWQSVICCLLAGLLMWIPGWFGVMNVWTLLVPAALFFFGAGMLFPLATSG---AMEPFP-YLAGTAGALLGGLQ 343 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHHHH---HHhhcc-ccchHHHHHHHHHH
Confidence 998743332222 2222222222111 1233445556677777777765544433 445555 45699999999999
Q ss_pred HHHHhHHHHHHHHHHhhhchH
Q psy14075 330 CLGFAIGPAMSGTLVNTIGFE 350 (414)
Q Consensus 330 ~~g~~ig~~~~g~l~~~~g~~ 350 (414)
.+|..+++.+.+.+.+...+.
T Consensus 344 ~lg~~~~~~~~~~~~~~~~~~ 364 (394)
T PRK11652 344 NIGSGLAALLSAMLPQTGQFS 364 (394)
T ss_pred HHHHHHHHHHHHHccCCchHH
Confidence 999999999999887654333
No 64
>PRK11010 ampG muropeptide transporter; Validated
Probab=100.00 E-value=6.2e-32 Score=260.28 Aligned_cols=349 Identities=13% Similarity=0.136 Sum_probs=265.0
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhccc-----CCchh-HHHHHHHHHHHHHHHHhh---hhHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-----GYSLP-MFTGFVIMFLSTLIFAFG---RTYGVLF 87 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~l~ 87 (414)
..|.+.++.|.+.+++|.+ +.....+ ++++++|+++||+ ||||. +..+.+..+++..++++. ++++.+.
T Consensus 34 ~l~~~l~~~g~~~~~ig~~-~~~~~~~-~~~~l~gpl~Dr~~~~~~Grrr~~ll~~~i~~~~~~~~~a~~~~~~~l~~l~ 111 (491)
T PRK11010 34 TLQAWMTVENIDLKTIGFF-SLVGQAY-VFKFLWSPLMDRYTPPFLGRRRGWLLATQLLLLVAIAAMGFLEPGTQLRWLA 111 (491)
T ss_pred HHHHHHHhCCCCHHHHHHH-HHHHHHH-HHHHHHHHHHHcccccCCCCchHHHHHHHHHHHHHHHHHHHcCCcchHHHHH
Confidence 3577778889999999997 4444444 5899999999999 99885 667888887887777775 4788999
Q ss_pred HHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-hcCChhHHHHHHHHHHHHHHH
Q psy14075 88 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-FVGKTAPFLILSALALGDGLL 166 (414)
Q Consensus 88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-~~gw~~~f~~~~~~~~~~~~~ 166 (414)
+.+++.|++.+...+...+++.|++| +++|+++.++...+..+|.++++.++..+.+ ..|||..|++.+++.++..+.
T Consensus 112 ~~~~l~~~~~a~~~i~~~a~~~~~~~-~~~rg~~~~i~~~g~~lG~llg~~l~~~l~~~~~GWr~~f~i~a~l~ll~~l~ 190 (491)
T PRK11010 112 ALAVVIAFCSASQDIVFDAWKTDVLP-AEERGAGAAISVLGYRLAMLVSGGLALWLADRYLGWQGMYWLMAALLIPCIIA 190 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999 4999999999999999999999999999998 579999999999888777665
Q ss_pred HHHhccCCCCC-CCCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhH-HHH
Q psy14075 167 QLLLLQPGVVK-QEVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFL-PAS 238 (414)
Q Consensus 167 ~~~~~~~~~~~-~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~-~~~ 238 (414)
.++. ||++++ ++++ ..++++.+++++.+...+..++..........+.+.|+.+.+|++..+.+.... ...
T Consensus 191 ~~~~-~e~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ll~~~l~~~~~~~~~~~~~~~l~~~~G~s~~~~g~~~~~~g~ 269 (491)
T PRK11010 191 TLLA-PEPTDTIPVPKTLEQAVVAPLRDFFGRNNAWLILLLIVLYKLGDAFAMSLTTTFLIRGVGFDAGEVGLVNKTLGL 269 (491)
T ss_pred HHhc-CCCccccccccchhhhHHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHH
Confidence 5553 433221 1111 124566777777766655555555665666677888887778999999999874 556
Q ss_pred HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh---hhh-hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc
Q psy14075 239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI---PLA-RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRH 314 (414)
Q Consensus 239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~---~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
++.+++.++.|+++||+++|+.+..+.++.++..+.+ ... ++.+......++..++.+...+... +...+..+
T Consensus 270 i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~~~~~g~~~~~~~---a~~~~l~~ 346 (491)
T PRK11010 270 LATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFENLCGGMGTAAFV---ALLMTLCN 346 (491)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHcC
Confidence 7999999999999999999887776665555443322 222 2332333334443334444433333 33456666
Q ss_pred ccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 315 TAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 315 ~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
++..++.+|+.+....+|..+++.+.|.+.|..||+..|.+.+++.+.+.+.....++
T Consensus 347 ~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 347 KSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777999999999999999999999999999999999999999988888777776654
No 65
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=100.00 E-value=2.8e-32 Score=256.87 Aligned_cols=340 Identities=10% Similarity=0.022 Sum_probs=263.5
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHH
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF---GRTYGVLFLARSL 92 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l 92 (414)
+..|.+++++|.|+.+.|++.+.+.+++.+++++.|++.||+|||+++..+.++++++.+++.. .++++.+++.|++
T Consensus 24 ~l~~~~~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~l~~~~~~~~~~~~~l~~~~l 103 (410)
T TIGR00885 24 PMVPQFQQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAFLFWPAAEIMNYTLFLVGLFI 103 (410)
T ss_pred HHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHH
Confidence 4568999999999999999999999999999999999999999999999999999999988654 4689999999999
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh--------------------------h
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ--------------------------F 146 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~--------------------------~ 146 (414)
.|+|.|...+...+++.+..| +++|++.+++.+...++|..++|.+++.+.. .
T Consensus 104 ~G~g~g~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 182 (410)
T TIGR00885 104 LTAGLGFLETAANPYILVMGP-ESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPHQSQDVLDKLSPEELSAIKHSDL 182 (410)
T ss_pred HHhhHHHHHhhhhHHHHHHCC-HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccchhhhhhhcCHHHHHHHHHHHH
Confidence 999999999999999999998 4899999999999999999999999887742 2
Q ss_pred cCChhHHHHHHHHHHHHHHHHHHhccCC-CCCCCC---CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHH
Q psy14075 147 VGKTAPFLILSALALGDGLLQLLLLQPG-VVKQEV---EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDT 222 (414)
Q Consensus 147 ~gw~~~f~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (414)
.+||++|++.+++.++..+...+...|+ ++++++ ...+.++++|+|+++...+..+++........++++.|.++.
T Consensus 183 ~~w~~~fl~~a~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~f~yvg~e~~~~s~l~~y~~~~ 262 (410)
T TIGR00885 183 ASVQTPYMIIGAVVLAVALLIMLTKMPALNHSDAKQISFSASLSRLARIRHYREGVIAQFFYVGVQIMCWTFIIQYAVRL 262 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccccccchhhHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 4699999999988777655544332222 111111 112445788999998888888888888878888999998763
Q ss_pred h-CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhh
Q psy14075 223 M-GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSS 301 (414)
Q Consensus 223 ~-g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 301 (414)
. +.+....+...........+|+++.+++.||+++|+.+.++..+..+..++....++... ....++.|++.+..+|.
T Consensus 263 ~~~~~~~~a~~~~~~~~~~~~vGR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll~~~~~~~~~-~~~l~~~glf~s~~fp~ 341 (410)
T TIGR00885 263 IPGMTAGFAANYNIGAMVIFFISRFIGTWLISYLAAHKVLMAYAIIGMALCLGSIFAGGHVG-LYCLTLCSAFMSLMFPT 341 (410)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHcCChHH-HHHHHHHHHHHHHHHHH
Confidence 2 333344455666666788999999999999999999988888888888777777655433 45566677777777665
Q ss_pred hhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh------chHHHHHHHHHHHHH
Q psy14075 302 MMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI------GFEWMLFIIAILDFM 362 (414)
Q Consensus 302 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~------g~~~~~~~~~~~~~~ 362 (414)
..+. ..+..+++......++... .+|+++.|++.|.+.|.. +++..|++...+.+.
T Consensus 342 i~sl---~~~~~g~~~~~~s~~l~~~--~~Gga~~p~l~G~~~d~~~~~~~~~~~~~~~~~~~~~~~ 403 (410)
T TIGR00885 342 IYGI---ALKGLGQDTKYGAAGLVMA--IIGGGIVPPLQGFIIDMKEIAAAPAVNTSFILPLLCFAV 403 (410)
T ss_pred HHHH---HHhhhhhhhhhhHHHHHHH--HhccchHHHHHHHHHHHhcccccCccchHHHHHHHHHHH
Confidence 5544 4555555543334444433 399999999999999965 477778765444433
No 66
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=100.00 E-value=2.8e-32 Score=255.77 Aligned_cols=336 Identities=15% Similarity=0.086 Sum_probs=262.5
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCc----hhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYS----LPMFTGFVIMFLSTLIFAFGRTYGVLFLARSL 92 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr----~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l 92 (414)
.+|.+.+|+|.|.+++|++.+++.++..++++++|++.||+||| +.+.+..... .......++++|.+++.|++
T Consensus 26 ~l~~~l~~~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~l~i~~~l 103 (382)
T PRK11128 26 FWSVWLKGQGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWFGAHSFWLLFVAIGL 103 (382)
T ss_pred hHHHHHHhcCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHHhcccHHHHHHHHHH
Confidence 45778899999999999999999999999999999999999994 3333222222 22334446889999999999
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
.|++.+...|...++..++ + ++|+++++......++|..+||++++.+.+++|||..|++.++..++..+... ..|
T Consensus 104 ~g~~~~~~~~~~~a~~~~~-~--~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~~~~~~~~~~~~~-~~~ 179 (382)
T PRK11128 104 FNLFFSPLVPLTDALANTW-Q--KQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWILTAGVASMLLGQL-LRP 179 (382)
T ss_pred HHHHHcccccHHHHHHHHH-H--hhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHHHHHHHHHHHHHH-ccC
Confidence 9999999999888887776 2 57889999999999999999999999999999999999988876555444333 333
Q ss_pred CCCCC-C--CC---CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhh
Q psy14075 173 PGVVK-Q--EV---EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTN 246 (414)
Q Consensus 173 ~~~~~-~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 246 (414)
+++++ + ++ ...++++++|+|+++...+..++..........+.|.|+++ .|.++.+.|.+.....++.++...
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~ 258 (382)
T PRK11128 180 TIMPQGESRQQESAGWPAWKALLKEPTVWRFLLCVSLLQGSHAAYYGFSAIYWQA-AGYSASTIGYLWSLGVVAEVLIFA 258 (382)
T ss_pred CCCCccccccccccccchHHHHHcChhHHHHHHHHHHHHHHhHhHHHHHHHHHHH-CCCCHhHHHHHHHHHHHHHHHHHH
Confidence 32111 1 11 13467889999999988777777777777777888998876 799998999999988899999999
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHH
Q psy14075 247 LFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGD 326 (414)
Q Consensus 247 ~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~ 326 (414)
+.+++.||+++|+.+..+.+..+++.+.+...++.+..++..++.|++.+...+.... +..+. +++++++..+..+
T Consensus 259 ~~g~l~~r~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~---~~~~~-~~~~~~~~~~~~~ 334 (382)
T PRK11128 259 FSNRLFRRWSARDLLLLSAICGVVRWGLMGSTTALPWLIVIQILHCGTFTVCHLAAMR---YIAAR-PGSEVIRLQALYS 334 (382)
T ss_pred HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHC-CHhhhHHHHHHHH
Confidence 9999999999999999999988888877777788777777888888888776444333 33343 4555688888876
Q ss_pred -HHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy14075 327 -VAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYA 364 (414)
Q Consensus 327 -~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 364 (414)
....+|..+||.+.|.+.|.+|+ ..++..+++.+.+.
T Consensus 335 ~~~~~~g~~ig~~i~G~l~~~~g~-~~~~~~~~~~~~~~ 372 (382)
T PRK11128 335 ALAMGGSIAIMTVLSGFLYQHLGA-GVFWVMALVALPAL 372 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHH
Confidence 44567789999999999999987 46666665555443
No 67
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=100.00 E-value=5.3e-31 Score=248.87 Aligned_cols=348 Identities=15% Similarity=0.118 Sum_probs=253.5
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhccc-----CCch-hHHHHHHHHHHHHHHHHhh---hhHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-----GYSL-PMFTGFVIMFLSTLIFAFG---RTYGVLF 87 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~-~l~~~~~~~~~~~~~~~~~---~~~~~l~ 87 (414)
.+|.+-++.|.|.+++|++...... .+.++++|+++||+ |||| .+.++.++.+++..+.++. ++++.++
T Consensus 21 ~~~~~l~~~g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~~l~~~~~~~~~~~l~ 98 (402)
T PRK11902 21 TLQAWMTVEGLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIAAMAFCPPHAALWPLA 98 (402)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHHHHHhcCccchHHHHH
Confidence 4688888999999999999777765 58999999999999 8876 6888888888888887776 4578888
Q ss_pred HHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-cCChhHHHHHHHHHHHHHHH
Q psy14075 88 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGLL 166 (414)
Q Consensus 88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~ 166 (414)
+..++.++..+...++..+++.|++| +|||+++.++...+.++|.++++.+++.+.+. .|||..|++.++..++..+.
T Consensus 99 ~~~~~~~~~~~~~~~~~~al~~~~~~-~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw~~~f~i~a~~~l~~~l~ 177 (402)
T PRK11902 99 GLAVLVAFLSASQDIVFDAYSTDVLH-PEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGWGNTYLLMAGLMLAGALT 177 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcC-hhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCHHHHHHHHHHHHHHHHHH
Confidence 88888899899999999999999999 48999999999999999999999999999885 59999999999887766554
Q ss_pred HHHhccCCCCCC-CCC------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHH-
Q psy14075 167 QLLLLQPGVVKQ-EVE------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPAS- 238 (414)
Q Consensus 167 ~~~~~~~~~~~~-~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~- 238 (414)
.++. +|+++++ +++ .+++++++|||.++...+..++..........+.+.++.+.+|.++.+.++.....+
T Consensus 178 ~~~~-~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~l~~~~G~~~~~~g~~~~~~~~ 256 (402)
T PRK11902 178 TLWA-PEPEVPARPPRSLGEAVVGPLRDFFSRRGAWALLLLIVLYKLGDAFAGSLSTTFLIRGAGFSAGEVGIVNKTLGL 256 (402)
T ss_pred HHhc-CCCcccccccchhHHHHHHHHHHHHhCcCHHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCHHHHHHHHhHHHH
Confidence 4433 3332221 111 124667889998877666655555443333344555677778999999999876654
Q ss_pred HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh---hhh-hhhHHHHHHHHHHHHHHHhhhhhhhhhhh-hhhhcc
Q psy14075 239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI---PLA-RNINHLIVPNAGLGFAIGMVDSSMMPELG-YLVDIR 313 (414)
Q Consensus 239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~---~~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~~~~ 313 (414)
++.+++.++.+++.||+++|+.+..+..+..+..+.+ ... ++.+.......+..+..+.......+... ...+..
T Consensus 257 ~~~i~g~~~~g~l~~r~g~~~~l~~~~~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 336 (402)
T PRK11902 257 AATIVGALAGGTLMVRLGLYRSLMLFGVLQAVSNLGYWVLAVTPKHLWTMALAIGIENLCGGMGTAAFVALLMALCNRSF 336 (402)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 4688899999999999999888777666655543332 233 23343333333333333333332333322 233444
Q ss_pred cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 314 ~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
| ++..+..+....++..+++.+.|.+.|..||+..|...+++++++.++....++
T Consensus 337 ~----~~~~~~~~~~~~l~~~~~~~~~G~l~~~~G~~~~f~~~~~~~~~~~~~~~~~~~ 391 (402)
T PRK11902 337 S----ATQYALLSALASVGRVYVGPTSGYLVEAYGWPGFYLMTVVIALPGLALLWLMRG 391 (402)
T ss_pred c----HHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHhh
Confidence 4 344566666667888877889999999999999999988888887666544433
No 68
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=100.00 E-value=9.8e-32 Score=260.81 Aligned_cols=342 Identities=15% Similarity=0.092 Sum_probs=243.6
Q ss_pred cCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhh------HHHHHHHHHHHhhhhhh
Q psy14075 26 MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT------YGVLFLARSLQGIGSSC 99 (414)
Q Consensus 26 g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~------~~~l~~~r~l~G~~~~~ 99 (414)
+.++.+.+++.+.+.+++.++++++|+++||+|||+++.++.++..++.++++++++ ++.++++|+++|++.|.
T Consensus 52 ~~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~ 131 (502)
T TIGR00887 52 PLPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGG 131 (502)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhh
Confidence 345667899999999999999999999999999999999999999999999988766 78999999999999999
Q ss_pred hhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-----------------------hcCChhHHHHH
Q psy14075 100 SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-----------------------FVGKTAPFLIL 156 (414)
Q Consensus 100 ~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-----------------------~~gw~~~f~~~ 156 (414)
..+....++.|++|+ ++|++++++.+....+|.++++.++..+.. .++||+.|.+.
T Consensus 132 ~~~~~~~~~~e~~p~-~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~~ 210 (502)
T TIGR00887 132 DYPLSAIITSEFATK-KWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGFG 210 (502)
T ss_pred hhHHHHHHHHHhcCh-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHHH
Confidence 999999999999995 999999999999999999999988876542 14799999888
Q ss_pred HHHHHHHHHHHHHhccCCCC------CC-C------------------C-----------CCchhhhhccC---hHH---
Q psy14075 157 SALALGDGLLQLLLLQPGVV------KQ-E------------------V-----------EPPTLKSLVMD---PYI--- 194 (414)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~~~------~~-~------------------~-----------~~~~~~~~~~~---~~~--- 194 (414)
++.+++..+..++ .||+++ ++ + + .+.++++++++ ++.
T Consensus 211 ~ip~~i~~~~~~~-lpESpr~l~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 289 (502)
T TIGR00887 211 AVPALLALYFRLT-IPETPRYTADVAKDVEQAASDMSAVLQVKIEAEPDEVEKASTAVEVPKASWSDFFTHFFKWRHGKH 289 (502)
T ss_pred HHHHHHHHHHHHh-CCCCHHHHHHhCcchHHHHHHHHHHhccccccCcccccchhccccchhhhHHHHHHHHhhhHHHHH
Confidence 8777665555443 343321 00 0 0 00134455542 121
Q ss_pred -HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhh------------HhHHHHHHHHhhhhhhhhhhhhhhhHHHH
Q psy14075 195 -LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGV------------SFLPASISYLIGTNLFGPLGHRMGRYLAA 261 (414)
Q Consensus 195 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~------------~~~~~~~~~~~~~~~~g~l~d~~~~~~~~ 261 (414)
+......+.....+++...+.|.++++ .|++..+.+. ......++.+++.++.+++.||+|||+.+
T Consensus 290 ~~~~~~~~~~~~~~~y~~~~~~p~i~~~-~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~l~dr~gRR~~l 368 (502)
T TIGR00887 290 LLGTAGSWFLLDIAFYGVNLNQKVILSA-IGYSPPAATNNAYEELYKTAVGNLIIALAGTVPGYWVTVFLVDIIGRKPIQ 368 (502)
T ss_pred HHHHHHHHHHHHHHHHccccccHHHHHH-HcCCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcchhHH
Confidence 111222333344555677788998875 6877543221 12334456677888999999999999998
Q ss_pred HHHHHHHHHHHHHhhhhhh---hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHH
Q psy14075 262 LLGLLIIGICLMMIPLARN---INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPA 338 (414)
Q Consensus 262 ~~~~~~~~i~~~~~~~~~~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~ 338 (414)
..+..+.++++.++....+ ........++.....+.. .......+..|.+|++.|+++.|+.+....++++++|.
T Consensus 369 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~E~~p~~~R~~~~g~~~~~~~~~~~~~~~ 446 (502)
T TIGR00887 369 LMGFFILTVLFFVLGFAYNHLSTHGFLAIYVLAQFFANFG--PNATTFIVPGEVFPTRYRSTAHGISAASGKAGAIIGQF 446 (502)
T ss_pred HHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHhcC--CCchhhhhhhccCchhHHHHHHHHHHHHhhhHHHHHHH
Confidence 8888777776655554321 111111111111111111 11222234679999999999999999999999999999
Q ss_pred HHHHHHhh----------hchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 339 MSGTLVNT----------IGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 339 ~~g~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
+.+.+.|. .++...|.+.+++.+++.+..+++++
T Consensus 447 ~~~~l~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~lpE 490 (502)
T TIGR00887 447 GFLYLAQHGDPTKGYPTGIWMGHVLEIFALFMFLGILFTLLIPE 490 (502)
T ss_pred HhhhhhccccccccccccccchHHHHHHHHHHHHHHHHheEecc
Confidence 99999884 34556777777777766555544444
No 69
>PRK09528 lacY galactoside permease; Reviewed
Probab=100.00 E-value=6.3e-32 Score=256.77 Aligned_cols=345 Identities=14% Similarity=0.125 Sum_probs=247.7
Q ss_pred hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH---hhhh-----HHHHHHHHHH
Q psy14075 21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---FGRT-----YGVLFLARSL 92 (414)
Q Consensus 21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~-----~~~l~~~r~l 92 (414)
+.+++|.|+.++|++.+.+.+++.++++++|+++||+||||+++++..+.+++..... .++. ....++.++.
T Consensus 37 l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (420)
T PRK09528 37 LHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIISGLLVLFGPFFIYVFAPLLQYNILLGAIVGGIY 116 (420)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566999999999999999999999999999999999999999887766665543221 1111 1112223333
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
.|.+.....+....+..+ .+ +++++.++......++|..++|++++.+.+ .+|+++|++.+++.++..+..++..+
T Consensus 117 ~~~~~~~~~~~~~~~~~~-~~--~~~g~~~g~~~~~~~~g~~i~~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~ 192 (420)
T PRK09528 117 LGFGFLAGAGAIEAYIER-VS--RRSGFEYGRARMWGSLGWALCAFIAGILFN-INPQINFWLGSGSALILLVLLFFAKP 192 (420)
T ss_pred hhhhhccchhhhhhHHHH-HH--hhccccchhhHHhhhHHHHHHHHHHHHHHh-cCchHhHHHHHHHHHHHHHHHhcccc
Confidence 333333333333333322 22 467788899999999999999999999887 58999999998888777666665554
Q ss_pred CCCCCC--------CCCC---chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHh---CCCccchhhHhHHHH
Q psy14075 173 PGVVKQ--------EVEP---PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTM---GADKWQQGVSFLPAS 238 (414)
Q Consensus 173 ~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~g~~~~~~~ 238 (414)
|++++. ++++ ++.++.+|||+++...+........+.....+.|.|+.+.+ +.+..+.+...+...
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 272 (420)
T PRK09528 193 DAPSTAKVANALGANASAVSLKDALALLKLPKFWFLVLYVIGVACFYDVFDQQFPNFFASFFATPEQGTRVFGYLNSFQV 272 (420)
T ss_pred cccchhhhccchhcccccccHHHHHHHccCCCeEeehHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchHHHHHHHHHHH
Confidence 433221 0111 23445778888776555554444555555556777776643 455567788888888
Q ss_pred HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075 239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY 318 (414)
Q Consensus 239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (414)
+...++.++.|++.||+++|+.+..+..+..++.+++.+.++.+.+.....+.+++.+...+ ....+..+..|++.+
T Consensus 273 ~~~~~~~~~~g~l~dr~g~~~~~~~~~~l~~~~~~l~~~~~~~~~~~~~~~l~g~~~~~~~~---~~~~~~~~~~~~~~~ 349 (420)
T PRK09528 273 FLEALIMFFAPFIINRIGAKNALLLAGTIMAVRIIGSGFATGPLEVSILKLLHAFEVPFLLV---GVFKYITLNFDVRLS 349 (420)
T ss_pred HHHHHHHHHHHHHHHHhCcchhhHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHcCccce
Confidence 99999999999999999999998888888888888877777777666666666665554422 233456677788888
Q ss_pred hhHHhH-HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 319 GSVYAI-GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 319 g~~~g~-~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
++..+. .+....+|..++|.+.|++.|..||+..|...+++.++..++.+...+
T Consensus 350 a~~~~~~~~~~~~lg~~ig~~~~G~l~~~~G~~~~f~~~~~~~~i~~~~~~~~~~ 404 (420)
T PRK09528 350 ATIYLVGFQFAKQLGAVFLSTLAGNLYDSIGFQGTYLILGGIVLLFTLISVFTLS 404 (420)
T ss_pred eeeeeehHHHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHhc
Confidence 887766 677789999999999999999999999999988887776666555444
No 70
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=100.00 E-value=1.2e-31 Score=252.82 Aligned_cols=339 Identities=19% Similarity=0.247 Sum_probs=251.7
Q ss_pred hhhhhhhc--CCcchHHHHHHH-----HHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHH-------
Q psy14075 19 ENRHKYLM--GETKAVGVMFGS-----KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYG------- 84 (414)
Q Consensus 19 ~~~~~~~g--~s~~~~g~~~s~-----~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~------- 84 (414)
+.+.+++. .++++.+.+.+. ..++..+++++.|+++||+||||++..+.++..++.++++++++++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (394)
T TIGR00883 17 VLVFHTFFPPSGDPLVALLATFATFAAGFLARPLGAIVFGHFGDRIGRKKTLVITLLMMGIGTLLIGLLPSYATIGIWAP 96 (394)
T ss_pred HHHHHHhcCCCCChHHHHHHHHHHHHHHHHHhhhHHHHhhhhhhhhhhHHHHHHHHHHHHHHHHHHhhCCChhhhHHHHH
Confidence 34444443 456666665543 3334457899999999999999999999999999999999999875
Q ss_pred -HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh--------hhcCChhHHHH
Q psy14075 85 -VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY--------QFVGKTAPFLI 155 (414)
Q Consensus 85 -~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--------~~~gw~~~f~~ 155 (414)
.+++.|+++|++.+...+...+++.|++|+ ++|++..+..+.+..+|..+++.++..+. +.++||+.|++
T Consensus 97 ~~~~~~r~l~G~~~~~~~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~G~~i~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 175 (394)
T TIGR00883 97 ILLLLARLIQGFSLGGEWGGAALYLAEYAPP-GKRGFYGSFQQVGAPVGLLLAALTVLLLSYLLGDDALLEWGWRIPFLV 175 (394)
T ss_pred HHHHHHHHHHHhhccccccccHHHhhhcCCc-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHhhccchHHHHHH
Confidence 488999999999999999999999999994 99999999999999999999998876654 35789999998
Q ss_pred HHHHHHHHHHHHHHhccCCCC-----CCCCCCchhhhhccChH--HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc
Q psy14075 156 LSALALGDGLLQLLLLQPGVV-----KQEVEPPTLKSLVMDPY--ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW 228 (414)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 228 (414)
.+++.++.........++++. ++++++.+.++.+++++ ++......++..........+.|.|+++.+|.++.
T Consensus 176 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 255 (394)
T TIGR00883 176 SAVLVLIGLYLRRNLEETPVFEKAQEKHKKKRGPIRETLTKHRKPFLLGLGLVIATTTTFYLITTYLPTYLTQTLGLSAN 255 (394)
T ss_pred HHHHHHHHHHHHHhcCCChhHHHHHhccccccCCHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCChh
Confidence 877766554443333322211 11122334566676655 66666666666777777888999999888899999
Q ss_pred chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHH-HHh-hhh--hhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075 229 QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICL-MMI-PLA--RNINHLIVPNAGLGFAIGMVDSSMMP 304 (414)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~-~~~-~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~ 304 (414)
+.+.......++..++.++.+++.||++||+.+..+..+..+.. ... ... ++.+......++.+++.+...+...
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~- 334 (394)
T TIGR00883 256 SALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGLALIGGMYTGPMG- 334 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHhhhHH-
Confidence 99999999999999999999999999999987765544433322 222 221 2344444555666666666644443
Q ss_pred hhhhhhhcccccchhhHHhHH-HHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHH
Q psy14075 305 ELGYLVDIRHTAVYGSVYAIG-DVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDF 361 (414)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~g~~-~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~ 361 (414)
....|..|++.|+++.++. +....+|..++|.+.|++.|+.| ++..++...++.+
T Consensus 335 --~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 335 --SFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred --HHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 3466888888999999984 45567888899999999999988 7766666554443
No 71
>KOG2504|consensus
Probab=100.00 E-value=1.9e-32 Score=260.56 Aligned_cols=351 Identities=25% Similarity=0.342 Sum_probs=308.0
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHH-HHH
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLAR-SLQ 93 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r-~l~ 93 (414)
-+..+.+.++++.+.++++|+.++..-.+.+..|+.+.+.||+|.|++.+.|.++.+++.++.+|++++|++++.. ++.
T Consensus 66 Gv~~~~~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~~g~~lssF~~~i~~l~lt~gvi~ 145 (509)
T KOG2504|consen 66 GLLFEELMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAALGLLLSSFATSLWQLYLTFGVIG 145 (509)
T ss_pred hhhHHHHHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHh
Confidence 3456889999999999999999999999999999999999999999999999999999999999999999999888 889
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQP 173 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 173 (414)
|+|.|..+.++..++..+|+ |+|+.+.|+...+.++|..+-|.+...+.+.+|||+.+++.+.+.+-..+.....+|.
T Consensus 146 G~G~~~~~~paiviv~~YF~--kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G~r~~~l~~~~~~l~~~~~~~~~rp~ 223 (509)
T KOG2504|consen 146 GLGLGLIYLPAVVILGTYFE--KKRALATGIAVSGTGVGTVVFPPLLKYLLSKYGWRGALLIFGGISLNVLVAGALLRPL 223 (509)
T ss_pred hccchhhhcchhhhhhhHhH--HHHHHHHhhhhccCCcceeeHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99999999999999999984 8999999999999999999999999999999999999999999987777777766661
Q ss_pred CCCC-----------------------------C---CC--------------------CCch-h---hhhccChHHHHH
Q psy14075 174 GVVK-----------------------------Q---EV--------------------EPPT-L---KSLVMDPYILIA 197 (414)
Q Consensus 174 ~~~~-----------------------------~---~~--------------------~~~~-~---~~~~~~~~~~~~ 197 (414)
..+. . .+ .+.. . .+++|+|.++..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ll~~~~fl~~ 303 (509)
T KOG2504|consen 224 SPPKKPNEEKDLRNSAASVESTPKPVELRISERDSGLKKLSLSNLATLKRGPDKWRNSPLQAFLSMLDLSLLKDPKFLLL 303 (509)
T ss_pred CcCCCchhhhhhccccccccccccccccccccCCCCCCcccccchhhhhhCCccccccchhhhhhhhhHHHHcCchHHHH
Confidence 1110 0 00 0001 1 478899999999
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh--hHHHHHHHHHHHHHHHHHh
Q psy14075 198 AGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG--RYLAALLGLLIIGICLMMI 275 (414)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~i~~~~~ 275 (414)
.+...+...++.....++|.|.++ .|++..++..++++.++..++++++.|++.|+.. ++....++.+..+++.+..
T Consensus 304 ~~~~~~~~~g~~~p~~~l~~~~~~-~g~~~~~aa~l~Siigi~~i~gRi~~G~laD~~~~~~~~~~~~~ll~~gl~~~~~ 382 (509)
T KOG2504|consen 304 ALSNLFAYLGFNVPFVYLPSYAKS-LGLSSNDAAFLLSIIGVSDIIGRIILGLLADKPGIRALVLFLLTLLIAGLARLFL 382 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhh-cCCChhhhHHHHHHHHHhhhhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999985 7999999999999999999999999999999977 4556667778888888888
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHH
Q psy14075 276 PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLF 354 (414)
Q Consensus 276 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~ 354 (414)
++.++++.+....+++|++.|......... ..+..+.++...++|+...+..++..+||++.|++.|..| |...|+
T Consensus 383 p~~~~~~~l~~~~~~fG~~~g~~~~l~~~i---~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~~~d~tg~Y~~~f~ 459 (509)
T KOG2504|consen 383 PFATTYVGLIVFSILFGFCVGSFSSLTPVI---LVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGLLYDITGNYDHAFY 459 (509)
T ss_pred HHhccHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHcChhhcchHHHHHHHHhHHHHHcCcccceeeeeccCCeeeehh
Confidence 888898888999999999998876544433 5577778888999999999999999999999999999998 999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy14075 355 IIAILDFMYAPLLYLLR 371 (414)
Q Consensus 355 ~~~~~~~~~~~~~~~~~ 371 (414)
..+++.+++..++++.+
T Consensus 460 ~~g~~~~~s~~~~~~~~ 476 (509)
T KOG2504|consen 460 FCGLCFLLSAVLLLILR 476 (509)
T ss_pred hcChHHHHHHHHHHHhH
Confidence 99999999888777776
No 72
>KOG1330|consensus
Probab=100.00 E-value=2.1e-33 Score=251.74 Aligned_cols=331 Identities=20% Similarity=0.231 Sum_probs=249.0
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
+.+.+++.+|++++..|++.+.+.+.+.+++|+.|+++|||+||+++.+|..++.++.+++++++.+|++.++|.+.|+|
T Consensus 55 v~~~v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~~~~fs~~Fwq~~l~R~~vGiG 134 (493)
T KOG1330|consen 55 VLKEVQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVFASGFSNHFWQVLLCRGFVGIG 134 (493)
T ss_pred hhHHHHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 56788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC-ChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
.+...|..+++++|.+|+ ++|++++++++.+.++|..+|.+.+..+.++.+ |||.|+..++++++..++.+++.+|++
T Consensus 135 eAs~~~ia~s~IaD~f~~-~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~af~~~avl~vi~~~L~~~f~~eP~ 213 (493)
T KOG1330|consen 135 EASYSPIAPSLIADSFPD-DKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWAFRGSAVLGVIVGLLVFLFVREPE 213 (493)
T ss_pred hhhhcccchhHhhhcCcc-hhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEEEEeehHHHHHHHHHHHhhccCcc
Confidence 999999999999999994 999999999999999999999999999988766 999999999999999999888887765
Q ss_pred CCCCCC-----------C---chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHH---HhCCCccchhhHhHHHH
Q psy14075 176 VKQEVE-----------P---PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMD---TMGADKWQQGVSFLPAS 238 (414)
Q Consensus 176 ~~~~~~-----------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~g~~~~~~~ 238 (414)
+.++++ . ++.+.+.|+|.+....+......+....+..|.|.+... ..|.+..+.-++..+..
T Consensus 214 rga~~~~~~~~~~~~~~ts~~kDl~~l~~~~v~v~~sl~~~a~~fv~Gs~sww~p~~~~~~~~~~~~~~~~~~ifg~vt~ 293 (493)
T KOG1330|consen 214 RGARDEVDGENKMVKPFTSVWKDLKVLAKIKVFVLSSLGIIAAQFVIGSLSWWAPAFIYYSYELIGFDHNATLIFGGVTC 293 (493)
T ss_pred cccccccccCCcCCCCccchHHHHHHHHccCceeeehHHHHHHHHhccccchhhhhHHHHHHHHhCCccccchhhhhHHH
Confidence 422111 1 123444566666666666666666666666666665543 34556666667778888
Q ss_pred HHHHhhhhhhhhhhhhhhhH-------HHH-H---HHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy14075 239 ISYLIGTNLFGPLGHRMGRY-------LAA-L---LGLLIIGICLMMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPEL 306 (414)
Q Consensus 239 ~~~~~~~~~~g~l~d~~~~~-------~~~-~---~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~ 306 (414)
.++.+|.+++|.++||+.|+ +.- + .+..+.+..+.+..... +.....+.++++|........... .
T Consensus 294 ~~G~lGvl~Ggiisd~~~~~~~~~~~~~~~q~~~~~g~~~s~~~L~~~~~~~~~s~~~~~il~~~g~~~~~~~~a~n--~ 371 (493)
T KOG1330|consen 294 AGGSLGVLFGGIISDKLSRIFPNSGTLRASQLSAALGAPLSIPFLFLFPAFTSSSMIFGLILFLVGETISWFNWATN--N 371 (493)
T ss_pred hhchhhheehHHHHHHHHHhcccccchhHHHHHHhhhhhHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcccccc--c
Confidence 99999999999999995431 111 1 11222222222222222 222233444455554444322222 1
Q ss_pred hhhhhcccccchhhHHhHHHHHHHH-HHhHHHHHHHHHHhhh-chH
Q psy14075 307 GYLVDIRHTAVYGSVYAIGDVAFCL-GFAIGPAMSGTLVNTI-GFE 350 (414)
Q Consensus 307 ~~~~~~~~~~~~g~~~g~~~~~~~~-g~~ig~~~~g~l~~~~-g~~ 350 (414)
-...+..|++.|.+++++...+..+ |.+-+|++.|.+.|+. ||+
T Consensus 372 ~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGilsd~l~g~~ 417 (493)
T KOG1330|consen 372 PIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGILSDKLRGYK 417 (493)
T ss_pred ceeeEecCcccccHHHHHHHHHHHHhccCCCcceehhHHHHhhCCC
Confidence 1245777899999999997666544 5666676999999864 344
No 73
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.1e-31 Score=229.63 Aligned_cols=351 Identities=17% Similarity=0.163 Sum_probs=294.8
Q ss_pred ccccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy14075 14 EDVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ 93 (414)
Q Consensus 14 ~~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 93 (414)
.-+.++++.+|+|+|.++.|++++...+...+.+++..+++.|+|.+|.+..++++.+++.++-... +.+.++.+-.+.
T Consensus 31 vgPLL~~Ir~~~gls~s~aGlLTtLPll~fg~~ap~a~~Lar~~g~er~l~~~Llli~~G~~iR~~~-~~~~L~~gt~l~ 109 (395)
T COG2807 31 VGPLLDEIRQDLGLSFSVAGLLTTLPLLAFGLFAPAAPRLARRFGEERSLFLALLLIAAGILIRSLG-GLPLLFLGTLLA 109 (395)
T ss_pred hhhhHHHHHHHhcccHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhHHHHHHHHHHHHHHHHHHhcc-cHHHHHHHHHHH
Confidence 3456789999999999999999999999999999999999999999999999999999999999877 788888999999
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-CChhHHHHHHHHHHHHHHHHHHhc-
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGLLQLLLL- 171 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~- 171 (414)
|.|.+..+....+.+.+.|| |+-+..+|++.+..++|..+++.+.-.+.++. |||....+.+.++++..+.++.-.
T Consensus 110 G~gIav~nVLLPslIK~~Fp--k~~~~mtglYs~sl~~~aaLaa~lavpla~~~~gW~~aL~~WAl~allAl~~WlPq~~ 187 (395)
T COG2807 110 GAGIAVINVLLPSLIKRDFP--KRVGLMTGLYSTSLGAGAALAAALAVPLAQHSGGWRGALGFWALLALLALLIWLPQAL 187 (395)
T ss_pred HhhHHHHHHhhhHHHHhhcc--cchhhHHhHHHHHHHHHHHHHhhhhhHHHHhhccHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 99999999999999999997 68999999999999999999999999998887 799999999999988777666542
Q ss_pred cCCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhh
Q psy14075 172 QPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPL 251 (414)
Q Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l 251 (414)
+++....+.+..+..+++|+|.-|.+.+.+.++++.++....|+|.++.| .|+|+.++|.+.+...+.++...+....+
T Consensus 188 r~~~~~~~~~~~~~~~vw~~~~aW~vtLfmGlqS~~~Y~~~~WLP~ili~-~G~sa~~aG~llsl~~l~~~~~~ll~P~l 266 (395)
T COG2807 188 REQAASIATKLVSVRKVWRSPLAWQVTLFMGLQSLLYYIVIGWLPAILID-RGLSAAEAGSLLSLMQLAQLPTALLIPLL 266 (395)
T ss_pred cccccccccccccccccccCchhHHHHHHHHhhHHHHHHHHHHHHHHHHH-cCCCHHHhhhHHHHHHHHHHHHHHHHHHH
Confidence 22122233333445679999999999999999999999999999999999 59999999999999999999999999999
Q ss_pred hhhh-hhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHH
Q psy14075 252 GHRM-GRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFC 330 (414)
Q Consensus 252 ~d~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 330 (414)
.+|. ++|+.......++.++++.+.+.+....+.. .+++|++.|..++....... .+..++++.++-.|+.+.+++
T Consensus 267 a~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G~G~~F~laL~li~--~rs~~a~~Aa~LSgmaQg~GY 343 (395)
T COG2807 267 ARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLGQGGAFPLALTLIL--LRSSDAAIAAALSGMAQGVGY 343 (395)
T ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCccchHHHHHHHHHH--hhcCChHHHHHHHHHhhhhhH
Confidence 9975 4566667777777788777777654333333 58889998888776555532 233446677899999999999
Q ss_pred HHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 331 LGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 331 ~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
+-.++||++.|++.|.+| |+..+.....+.+...+.-+..-
T Consensus 344 llAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~ 385 (395)
T COG2807 344 LLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAG 385 (395)
T ss_pred HHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 999999999999999988 88777776666665555544443
No 74
>TIGR00895 2A0115 benzoate transport.
Probab=100.00 E-value=5.5e-32 Score=255.45 Aligned_cols=322 Identities=20% Similarity=0.222 Sum_probs=254.3
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
..|.+.+++|.++.+.+++.+.+.++..+++++.|+++||+|||+.+..+.++.+++.++..++++++.+++.|++.|++
T Consensus 39 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 118 (398)
T TIGR00895 39 AAPAISAEWGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNVTQLLILRFLAGLG 118 (398)
T ss_pred hHHHHhhccCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHhcc
Confidence 46788899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV 176 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 176 (414)
.+...+...+++.|++| +++|++++++.+....+|..+++.+++.+.+..+||+.|++.+++.++..++.+...+++++
T Consensus 119 ~~~~~~~~~~~~~~~~~-~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 197 (398)
T TIGR00895 119 LGGLMPNLNALVSEYAP-KRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPLLLLLLLMRFLPESID 197 (398)
T ss_pred cccchhhHHHHHHHHcC-HHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHHHHHHHHHHhCCCCCh
Confidence 99999999999999999 59999999999999999999999999999999999999999876666666655555444321
Q ss_pred C---C---------------------------CCCCc---h-hhhhccC---hHHHHHHHHHHHHHHHHHhhhhchHHHH
Q psy14075 177 K---Q---------------------------EVEPP---T-LKSLVMD---PYILIAAGAITFANTGIAMLEPSLPIWM 219 (414)
Q Consensus 177 ~---~---------------------------~~~~~---~-~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (414)
. + ++++. + .+.++++ +..+...+..++..........+.|.+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 276 (398)
T TIGR00895 198 FLVSKRPETVRRIVNAIAPQMQAEAQSALPEQKATQGTKRSVFKALFQGKTARITVLLWLLYFMLLVGVYFLTNWLPKL- 276 (398)
T ss_pred HHHhcCHHHHHHHHHHHHHhccccccccccccccccchhhHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHH-
Confidence 0 0 00000 1 1112222 233344444455556666777788854
Q ss_pred HHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhh
Q psy14075 220 MDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVD 299 (414)
Q Consensus 220 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 299 (414)
.+..|.++.+.+.......++.+++.++.+++.||+++|+.............++....++.+......++.|++.+...
T Consensus 277 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 356 (398)
T TIGR00895 277 MVELGFSLSLAATGGALFNFGGVIGSIIFGWLADRLGPRVTALLLLLGAVFAVLVGSTLFSPTLLLLLGAIAGFFVNGGQ 356 (398)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHH
Confidence 45579999999999999999999999999999999999855444333333333333324455556667777888877775
Q ss_pred hhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075 300 SSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTL 343 (414)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l 343 (414)
+... +...+..|++.|+++.|+.+....+|..++|.+.|++
T Consensus 357 ~~~~---~~~~~~~~~~~~g~~~g~~~~~~~~g~~~g~~~~G~l 397 (398)
T TIGR00895 357 SGLY---ALMALFYPTAIRATGVGWAIGIGRLGAIIGPILAGYL 397 (398)
T ss_pred HHHH---HHHhhcCCHHHHHHHHHHHHHHHHHHHHHHHHhHHhc
Confidence 5444 3467888899999999999999999999999999875
No 75
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=100.00 E-value=6.8e-31 Score=248.45 Aligned_cols=343 Identities=13% Similarity=0.055 Sum_probs=253.8
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCC-chhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGY-SLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGS 97 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 97 (414)
+.+.+++|.|..|+|++.+.+.++..++++++|+++||+|| |+++.++.++.+++..+..+.++++.+++.|++.|++.
T Consensus 27 ~~l~~~~g~s~~~iGl~~a~~~~~~~i~~~~~g~l~dr~g~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 106 (418)
T TIGR00889 27 SYMSKTLHFSGAEIGWVYSSTGIAAILMPILVGIIADKWLSAQKVYAVCHFAGALLLFFAAQVTTPAGMFPVLLANSLAY 106 (418)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHH
Confidence 45667899999999999999999999999999999999965 77888888888888888889999999999999999988
Q ss_pred hhhhhhHHHHHh--------hcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHH
Q psy14075 98 SCSSVSGMGMLA--------ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLL 169 (414)
Q Consensus 98 ~~~~~~~~~~i~--------~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 169 (414)
+...+...++.. |... ...|.+..| .+|..++|.+++.+.....|+ +|++.+++.++..+..+
T Consensus 107 ~~~~~~~~~l~~~~~~~~g~~~~~-~~~~~r~~G------~lG~~ig~~l~g~l~~~~~~~-~f~~~~~~~~~~~~~~~- 177 (418)
T TIGR00889 107 MPTIALTNSISYANLPQAGLDVVT-DFPPIRVMG------TIGFIAAMWAVSLLDIELSNI-QLYITAGSSALLGVFAL- 177 (418)
T ss_pred ccHHHHHHHHHHHHHhhcCCCchh-cCCCeeeeh------hHHHHHHHHHHHHhcccchhH-HHHHHHHHHHHHHHHHh-
Confidence 777776655432 2222 134455554 468888888888773322344 46666666666555444
Q ss_pred hccCCCCCCCCCC--------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc--------cchhhH
Q psy14075 170 LLQPGVVKQEVEP--------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK--------WQQGVS 233 (414)
Q Consensus 170 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--------~~~g~~ 233 (414)
..||+++++++++ .+.++++|+|+++...+..++..........+.|.|+++ .|.++ ...+..
T Consensus 178 ~~~e~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~~~~~~~~~~~~~g~~ 256 (418)
T TIGR00889 178 TLPDIPVAKSTAKMSIKVMLGLDAFILFKNKRMAIFFFFSMLLGAPLQITNIFGNGFLHE-FGRNPEFADSFVVKNASIW 256 (418)
T ss_pred cCCCCCCCccccccCHHHHhhhhHHHHhcCCCeeeHHHHHHHHHhHHHHHHHhHHHHHHH-hcccccccchhhhhhHHHH
Confidence 4444332211111 123467888888777776666666555666777888876 45443 456888
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-h---hHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy14075 234 FLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-N---INHLIVPNAGLGFAIGMVDSSMMPELGYL 309 (414)
Q Consensus 234 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~---~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 309 (414)
.+...+..+++.+..+++.||+|+|+++..+.++..++..++.... + .+.+.+..++.|++.+...+.. ...+
T Consensus 257 ~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l~l~~~l~g~~~~~~~~~~---~~~i 333 (418)
T TIGR00889 257 MSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALLFLSMIVYGCAFDFFNISG---SVFV 333 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHHHHHHHHHHHHHHHHHHHH---HHHH
Confidence 8999999999999999999999999999999998888766665532 1 2334455667777766553332 3456
Q ss_pred hhcccccchhhHHhHHH-HHHHHHHhHHHHHHHHHHhhh------chHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075 310 VDIRHTAVYGSVYAIGD-VAFCLGFAIGPAMSGTLVNTI------GFEWMLFIIAILDFMYAPLLYLLRNPP 374 (414)
Q Consensus 310 ~~~~~~~~~g~~~g~~~-~~~~~g~~ig~~~~g~l~~~~------g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (414)
.+..|++.|+++.|+.+ ....+|..+||.+.|++.|+. ||+.+|.+.+++.++..++.+++.+++
T Consensus 334 ~~~~p~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~~~i~~~l~~~~~~~~ 405 (418)
T TIGR00889 334 EKEVPVHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGYIAILAVLFMIFFKYS 405 (418)
T ss_pred HHHCCHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHHHHHHHHHHHHHhCCc
Confidence 78889999999999997 567899999999999999984 589999988888777777666665544
No 76
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=100.00 E-value=1.5e-31 Score=249.82 Aligned_cols=310 Identities=17% Similarity=0.183 Sum_probs=237.3
Q ss_pred cchh-hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHh
Q psy14075 17 AREN-RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARSLQG 94 (414)
Q Consensus 17 ~~~~-~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G 94 (414)
..|. +++++|.|+.+.+++.+.+.+++.+++++.|+++||+|||+.+.++.++..++.+++++++ +++.+++.|+++|
T Consensus 23 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g 102 (366)
T TIGR00886 23 LAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPCLWAGLAVQSYSVLLLLRLFIG 102 (366)
T ss_pred hhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 4564 7899999999999999999999999999999999999999999999999999999999999 9999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh----------hcCChhHH-HHHHHHHHHH
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ----------FVGKTAPF-LILSALALGD 163 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~----------~~gw~~~f-~~~~~~~~~~ 163 (414)
++.+. .+...+++.|++|+ ++|++++++.....++|..+++.+++.+.. +.+||+.| +..+++..+.
T Consensus 103 ~~~~~-~~~~~~~~~~~~~~-~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 180 (366)
T TIGR00886 103 IAGGS-FASCMPWISFFFPK-KIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGAGLPAHLAWGWAFVIVPAGILLLP 180 (366)
T ss_pred Hhchh-hHhHHHHHHHhcCH-hhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcccccccccccchhHHHHHHHHHHH
Confidence 98665 45668899999994 999999999998888888888887766654 24899999 4445555554
Q ss_pred HHHHHHhccCCCCCC-C---CCCc------------hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075 164 GLLQLLLLQPGVVKQ-E---VEPP------------TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK 227 (414)
Q Consensus 164 ~~~~~~~~~~~~~~~-~---~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 227 (414)
.++.+...+++++++ + .+.+ +.++.+++|+++...+..++..........+.|.|+++.+|.++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 260 (366)
T TIGR00886 181 ALLIFFVGADTPPGKPATGKLSFKGARWSVGTGALGDQLKVFRDRHTWILALLYSVTFGSFLGVSSIFAMFFKDQFGLSK 260 (366)
T ss_pred HHHHHHhcccCCcccccchhcccccccccccchhHHHHHHHHhccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH
Confidence 444444443322211 1 1111 45567888888887777777777777788899999999899999
Q ss_pred cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh--hh--hhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075 228 WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL--AR--NINHLIVPNAGLGFAIGMVDSSMM 303 (414)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~--~~--~~~~~~~~~~~~g~~~~~~~~~~~ 303 (414)
.+.+.+.....+..++++++.|++.||+++|+....+......+..++.. .. +.+.......+.+++.+...+...
T Consensus 261 ~~~~~~~~~~~~~~~~~~~~~g~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 340 (366)
T TIGR00886 261 VTAGAYASLGGLLGSLARPLGGAISDRLGGARKLLMSFLGVAMGAFLVVLGLVSPLSLAVFIVLFVALFFFSGAGNGSTF 340 (366)
T ss_pred HHHHHHHHHHHHHHHHHhhccchHHHhhccchhHHHHHHHHHHHHHHHHhcCCCcchHHHHHHHHHHHHHHhccccchhh
Confidence 99999999999999999999999999999988777766666555444433 21 333333444444555555544444
Q ss_pred hhhhhhhhcccccchhhHHhHHHHHHHHH
Q psy14075 304 PELGYLVDIRHTAVYGSVYAIGDVAFCLG 332 (414)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g 332 (414)
+. ..+..| +.+|+++|+.+...++|
T Consensus 341 ~~---~~~~~~-~~~g~~~g~~~~~~~~g 365 (366)
T TIGR00886 341 AL---VPHIFR-RATGAVSGLVGAIGNLG 365 (366)
T ss_pred hc---chhhch-hhcccHHHHHHHhccCC
Confidence 33 334444 57799999988877665
No 77
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=100.00 E-value=1.2e-30 Score=246.13 Aligned_cols=341 Identities=13% Similarity=0.133 Sum_probs=256.4
Q ss_pred hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHH---Hhh-----hhHHHHHHHHHH
Q psy14075 21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF---AFG-----RTYGVLFLARSL 92 (414)
Q Consensus 21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-----~~~~~l~~~r~l 92 (414)
+.+++|.++.+.|++.+.+.+++.+++++.|+++||+||||.++.+....+++.... .+. +.+..+.+.|++
T Consensus 29 ~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (396)
T TIGR00882 29 LHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLVLFAPFFIYVFGPLLQSNILVGAIVGGLY 108 (396)
T ss_pred HHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHH
Confidence 356789999999999999999999999999999999999999988777666544332 112 123445667888
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
.|++.+...+...++..|.. +++++.++......++|..++|++++.+.+ .+||.+|++.+++.++..+..+...+
T Consensus 109 ~g~~~~~~~~~~~~~~~~~~---~~~~~~~g~~~~~~~~g~~~g~~~~g~l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~ 184 (396)
T TIGR00882 109 LGFVFSAGAGAIEAYIEKVS---RNSNFEYGKARMFGCVGWALCASIAGILFS-IDPQIVFWLGSGFALILMLLLMFAKP 184 (396)
T ss_pred HHHHhccchhhHHHHHHHhh---hhcccccchhhhhcccHHHHHHHHHhhhhc-cCchHHHHHHHHHHHHHHHHHHHhCC
Confidence 89888888888777777743 344567788888899999999999998866 59999999999888887766655544
Q ss_pred CCCCCC-----------CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHh---CCCccchhhHhHHHH
Q psy14075 173 PGVVKQ-----------EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTM---GADKWQQGVSFLPAS 238 (414)
Q Consensus 173 ~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---g~~~~~~g~~~~~~~ 238 (414)
++++++ +++.++.++++|||.++...+..++....+.....+.+.|+++.+ +.+....|...+...
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~ 264 (396)
T TIGR00882 185 KAPSSATVANALGANASAFSLKLALELFRQRKFWMFVLYVVGVACVYDVFDQQFANFFTSFFATPQQGTRVFGYVTTMGE 264 (396)
T ss_pred CCchhhhhhcccccccCCCCHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHH
Confidence 432211 011234567889998877766666656666666667888887765 445556788888888
Q ss_pred HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075 239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY 318 (414)
Q Consensus 239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (414)
+...++....+++.||+++|+.+.++..+.++........++.+...+..++.|++...... ....+..+..+++.+
T Consensus 265 i~~~~~~~~~g~l~~r~g~~~~l~~~~~l~~l~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~---~~~~~~~~~~~~~~~ 341 (396)
T TIGR00882 265 LLNALIMFCAPLIINRIGAKNALLIAGTIMSVRIIGSSFATTALEVVILKMLHAFEVPFLLV---GCFKYITSQFDVRLS 341 (396)
T ss_pred HHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHH---HHHHHHHHhCCcceE
Confidence 88899999999999999999999888888888777766666766666666666655433311 222334455666666
Q ss_pred hhHHhH-HHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy14075 319 GSVYAI-GDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 319 g~~~g~-~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 368 (414)
++..+. .+....+|+.++|.+.|++.|..||+.+|.+.+++.++..++..
T Consensus 342 at~~~~~~~~~~~lg~~~~~~l~G~l~~~~G~~~~f~~~~~~~~i~~~~~~ 392 (396)
T TIGR00882 342 ATIYLIGFQFAKQLAMIFLSTLAGNMYDSIGFQGAYLVLGCIVLLFTLISV 392 (396)
T ss_pred EEeehHHHHHHHHHHHHHHHHhHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 776666 57888999999999999999999999999998888877766543
No 78
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=100.00 E-value=1.5e-30 Score=248.89 Aligned_cols=331 Identities=18% Similarity=0.179 Sum_probs=257.9
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc----cCCch-hHHHHHHHHHHHHHHHHhhhh------HHHH
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYSL-PMFTGFVIMFLSTLIFAFGRT------YGVL 86 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~-~l~~~~~~~~~~~~~~~~~~~------~~~l 86 (414)
.+.+.+++|+++.++|++.++..+..++.+|+.|+++|| +|||| .++.+....+++.+++.+.++ ...+
T Consensus 23 ~~~~~~~~g~s~~~~g~i~~~~~i~~~i~~p~~G~lsDr~~~r~Grrr~~i~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 102 (437)
T TIGR00792 23 LFFYTDVLGLSAAFVGTLFLVARILDAITDPIMGNIVDRTRTRWGKFRPWLLIGAIPFSIVLVLLFTTPDFSATGKLVYA 102 (437)
T ss_pred HHHHHHccCCCHHHHHHHHHHHHHHHHhccchheEeeecCCCCCCCcchhHHHhHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 466778899999999999999999999999999999998 67755 577888888888888877654 4567
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-------hcCChhHHHHHHHH
Q psy14075 87 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-------FVGKTAPFLILSAL 159 (414)
Q Consensus 87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gw~~~f~~~~~~ 159 (414)
++.+++.+++.+...++..++..|..++.++|++..++.+.+..+|..+++.+.+.+.. ..+||+.+.+.+++
T Consensus 103 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~~~~~l~~~~~~~~~~~g~~~~~~i~~~l 182 (437)
T TIGR00792 103 YITYILLGLFYSFVNIPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAVIVLPLVSYFGGGDDKFGWFMFALVLALI 182 (437)
T ss_pred HHHHHHHHHHHHhhcccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcccccHHHHHHHHHHH
Confidence 77888889998888888888999988545899999999999999998887776655543 45899999999998
Q ss_pred HHHHHHHHHHhccCCCCC--CC-CCC----chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhh
Q psy14075 160 ALGDGLLQLLLLQPGVVK--QE-VEP----PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGV 232 (414)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~--~~-~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 232 (414)
.++..+..++..+|++++ ++ +++ +.++++++||.++...+..++..........+.+.|.++.++ ++.+.+.
T Consensus 183 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 261 (437)
T TIGR00792 183 GVVSLIICFFGTKERYSEIPKNIEKKLSLKQIFKALFKNDQLLILCLAYLFYNLAFNIKNGVQVYYFTYVLG-DPELFSY 261 (437)
T ss_pred HHHHHHHHHcCCEecCCCCCcccccCCCHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHcchhheeEeeecC-ChHHHHH
Confidence 888777766666654422 11 111 235667889999888777777777777666666666666555 4556677
Q ss_pred HhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075 233 SFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311 (414)
Q Consensus 233 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 311 (414)
+.....++.+++.++.+++.||+|+|+.+..+..+..++.+.+.+.+ +.+...+..++.+++.+...+...+..++..|
T Consensus 262 ~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 341 (437)
T TIGR00792 262 MGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWALVADTVD 341 (437)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 77778899999999999999999999999888888887776665543 44455566677788887776666666555443
Q ss_pred c----ccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075 312 I----RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF 349 (414)
Q Consensus 312 ~----~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~ 349 (414)
. .+++.+|..+|+.+....+|..+++.+.|.+.+..||
T Consensus 342 ~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~ 383 (437)
T TIGR00792 342 YGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGY 383 (437)
T ss_pred hhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 2 2345679999999999999999999999999988776
No 79
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.98 E-value=6.2e-30 Score=237.90 Aligned_cols=309 Identities=15% Similarity=0.079 Sum_probs=241.7
Q ss_pred cccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhccc-----CCchh-HHHHHHHHHHHHHHHHhh---hhHHH
Q psy14075 15 DVARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-----GYSLP-MFTGFVIMFLSTLIFAFG---RTYGV 85 (414)
Q Consensus 15 ~~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-----Grr~~-l~~~~~~~~~~~~~~~~~---~~~~~ 85 (414)
....|.+.+|+|+|.+|+|+..+. .+...+ .+++|+++||+ ||||. ++.+.++.++...+.++. .+.+.
T Consensus 8 ~~~~~~~~~~~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l~~ 85 (356)
T TIGR00901 8 GNTLPYWLRSKNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDLPL 85 (356)
T ss_pred HhHHHHHHHHcCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhHHH
Confidence 345788999999999999999765 555555 99999999998 89887 567788888887777776 46677
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC--------ChhHHHHHH
Q psy14075 86 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG--------KTAPFLILS 157 (414)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g--------w~~~f~~~~ 157 (414)
+....++.+++.+...++..+++.|++| +|+|+++.++...+.++|.++++.+++.+.++.+ ||..|++.+
T Consensus 86 l~~~~~~~~~~~~~~~~~~~a~~~~~~~-~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f~i~a 164 (356)
T TIGR00901 86 LAGLAFLIAFFSATQDIALDAWRLEILS-DEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIFFWTA 164 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCC-HhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHHHHHH
Confidence 7788888899999999999999999999 4999999999999999999999999999998888 999999999
Q ss_pred HHHHHHHHHHHHhccCCCCCCCCC-------CchhhhhccChH---HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075 158 ALALGDGLLQLLLLQPGVVKQEVE-------PPTLKSLVMDPY---ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK 227 (414)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 227 (414)
+..++..+..++..||++++++++ .+++++++++|. ++...+..++....+.....+.|.|+++ +|+++
T Consensus 165 i~~l~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~g~~~ 243 (356)
T TIGR00901 165 LLILPGLLVTLFLAKEPQEDASVPKPLTQAVLKPIREFFQRKNMIQALLLLLLIVLYKLGDSAATVLTTLFLLD-MGFSK 243 (356)
T ss_pred HHHHHHHHHHHHhccCCCcccccchhHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCH
Confidence 988776666555555432221111 123455666664 6666666666777778888999999988 89999
Q ss_pred cchhhHhHHHH-HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh-----------hhhHHHHHHHHHHHHHH
Q psy14075 228 WQQGVSFLPAS-ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA-----------RNINHLIVPNAGLGFAI 295 (414)
Q Consensus 228 ~~~g~~~~~~~-~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~-----------~~~~~~~~~~~~~g~~~ 295 (414)
.+.+......+ ++.+++.++.+++.||+++|+.+..+.++.+++..++.+. ++.+......++.+++.
T Consensus 244 ~~~g~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 323 (356)
T TIGR00901 244 EEIALVAKINGLLGAILGGLIGGIIMQPLNILYALLLFGIVQALTNAGFVWLASNGHHDGITFPHLLMLFLTITLEAVTG 323 (356)
T ss_pred HHHHHHhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccchHHHHHHHHHHHHHHh
Confidence 99998887666 5778899999999999999988888888777766554443 23344455566667777
Q ss_pred HhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHH
Q psy14075 296 GMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFC 330 (414)
Q Consensus 296 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~ 330 (414)
+...+... +...+..|+++||+.+|+.++..+
T Consensus 324 ~~~~~~~~---~~~~~~~p~~~~g~~~g~~~~~~~ 355 (356)
T TIGR00901 324 GLGTVAFV---AFLSKLSNPKFGATQMALLSSLSA 355 (356)
T ss_pred HHHHHHHH---HHHHHhcCCCccHHHHHHHHHHHh
Confidence 77755554 446688889999999999887654
No 80
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.98 E-value=2.1e-30 Score=275.14 Aligned_cols=331 Identities=18% Similarity=0.181 Sum_probs=254.1
Q ss_pred chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHH---HHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHH
Q psy14075 30 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFT---GFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMG 106 (414)
Q Consensus 30 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~---~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 106 (414)
...++..+++.+++.++++++|+++||+|||+++.. ..+...+..+.....++++.++++|+++|++.+...|+..+
T Consensus 52 ~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a 131 (1140)
T PRK06814 52 ALVTLAGAVFILPFFIFSALAGQLADKYDKAKLAKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYS 131 (1140)
T ss_pred HHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHH
Confidence 457888999999999999999999999999998643 22333333333334589999999999999999999999999
Q ss_pred HHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCCCC--CC--
Q psy14075 107 MLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEV--EP-- 182 (414)
Q Consensus 107 ~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-- 182 (414)
++.+++|+ ++|++++|+.+++.++|.++||++++++.+..+|++.|+...+..++..++.++..++++++.+. +.
T Consensus 132 ~l~~~~~~-~~~~~a~~~~~~~~~ig~~igp~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (1140)
T PRK06814 132 ILPDHLNK-DELLGANALVEAGTFIAILLGTIIGGLATISGNFVILVALLMGIAVLGWLASLFIPKTGNAAPDLKIDRNI 210 (1140)
T ss_pred hhHhhcCc-cccchhhHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCCCCCCCCCCeeccch
Confidence 99999995 99999999999999999999999999999999999999555555554444444433322211111 11
Q ss_pred -----chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075 183 -----PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR 257 (414)
Q Consensus 183 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~ 257 (414)
..++.+.++|.++...+..++.++....+..++|.|+++.+|.++.+.|++.+..+++.+++.++.+++.|+..+
T Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~g~~~~~~g~~~~~~~~g~~ig~~~~g~l~~~~~~ 290 (1140)
T PRK06814 211 IRSTITLLKYAKADKRIWLAILGISWFWLVGAVVLSQLPLLAKETLGGDENVATLFLAVFSVGVAVGSFLASKLSEGRIT 290 (1140)
T ss_pred HHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCcee
Confidence 135567788999888888888777778888899999999999999999999999999999999999999988776
Q ss_pred HHHHHHHHHHHHHHHHHhhhh--------------------hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc
Q psy14075 258 YLAALLGLLIIGICLMMIPLA--------------------RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV 317 (414)
Q Consensus 258 ~~~~~~~~~~~~i~~~~~~~~--------------------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (414)
++.+..+.++.+++.+.+.+. .+.+.+.+..+++|++.+...+... +...+..|++.
T Consensus 291 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~p~~~ 367 (1140)
T PRK06814 291 LLYVPIGALLMGLFGLDLAFASSSVPAEPAQLKSILVFLSKRHGWRILIDLFGLAAAGGLYIVPLF---AALQAWANPAH 367 (1140)
T ss_pred eeeehHHHHHHHHHHHHHHhcccccccccccccchhhhhcccccHHHHHHHHHHHHHHHHhHHHHH---HHHHhhCCccc
Confidence 665555555544444333321 4455556667777887777654433 44667888999
Q ss_pred hhhHHhHHHHHHHHHHhHHHHHHHHHHh-hhchHHHHHHHHHHHHHHH
Q psy14075 318 YGSVYAIGDVAFCLGFAIGPAMSGTLVN-TIGFEWMLFIIAILDFMYA 364 (414)
Q Consensus 318 ~g~~~g~~~~~~~~g~~ig~~~~g~l~~-~~g~~~~~~~~~~~~~~~~ 364 (414)
+|+++|..++...++..+++.+.|.+.+ ..++...+.+.+.+.++..
T Consensus 368 ~G~v~g~~~~~~~~~~~ig~~~~g~l~~~~~~~~~~~~~~~~~~~~~~ 415 (1140)
T PRK06814 368 RARVIAANNVLNAAFMVAGTIILALLQALGFSIPWIILFIALANLIVA 415 (1140)
T ss_pred ceeeeHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999985 3456666665555444433
No 81
>KOG2533|consensus
Probab=99.98 E-value=4.3e-31 Score=248.70 Aligned_cols=332 Identities=16% Similarity=0.110 Sum_probs=252.1
Q ss_pred hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhh
Q psy14075 21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCS 100 (414)
Q Consensus 21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~ 100 (414)
+.+|.+....+.+.+.++++++++++++++|.+.||++..+.+....+.+++..++....+|++.+++.|++.|+.++..
T Consensus 72 ~~edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~ 151 (495)
T KOG2533|consen 72 LKEDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGG 151 (495)
T ss_pred CccccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhccc
Confidence 45899999999999999999999999999999999999999999999999999988888999999999999999999999
Q ss_pred hhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh------hcCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075 101 SVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ------FVGKTAPFLILSALALGDGLLQLLLLQPG 174 (414)
Q Consensus 101 ~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~------~~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 174 (414)
+|....+++.|+. +++|++.++++....++|.++|.+++..+.+ ..||||.|++.+++.++..++.+++.|+.
T Consensus 152 wP~~~~~lg~wy~-~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp~~ 230 (495)
T KOG2533|consen 152 WPGVVAILGNWYG-KSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLPDN 230 (495)
T ss_pred chHHHHHHHhhcC-hhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEecCC
Confidence 9999999999999 5999999999999999999999999988643 46899999999999999999988888765
Q ss_pred CCCC-------------------------CCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc
Q psy14075 175 VVKQ-------------------------EVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ 229 (414)
Q Consensus 175 ~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 229 (414)
+.+. +.+...+++.+++|++|...+..++.....+++.+|+|.|+++..|+|..+
T Consensus 231 P~~~~fl~~~ek~~~~~~~~~~~~~~~~~~~~~~~~~~a~~dp~vw~~~l~~~~~~lv~~~~~~~lpl~l~~~~~~s~~~ 310 (495)
T KOG2533|consen 231 PSKAWFLTDEEKELVVERLRESPSGGIENKFKWKGFKEALKDPGVWPFSLCYFFLKLVNYGFSYWLPLYLKSNGGYSELQ 310 (495)
T ss_pred hhhccccchHHHHHHHHHHHhccCCCcccccCHHHHHHHHhchhHHHHHHHHHHHhhccccHHHHHHHHHHcCCCcChHH
Confidence 5310 011234678899999999999999999999999999999999966799999
Q ss_pred hhhHhHHHHHHHHhhhhhhhhhhhh----hhhHHHHHHHHHHHH-HHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075 230 QGVSFLPASISYLIGTNLFGPLGHR----MGRYLAALLGLLIIG-ICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMP 304 (414)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~~~~~~~~~-i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 304 (414)
++.+..+..++++++.+++|.++|| ..+|........+.. ++...+.............+....+.....+....
T Consensus 311 a~~ls~~~~~~g~v~~i~ag~lsdr~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 390 (495)
T KOG2533|consen 311 ANLLSTPYDVGGIVGLILAGYLSDRLKTIFARRLLFIVFLCLYAIIGAISLLAAAVLPGAYGAFLIGPYGLIATAIIALS 390 (495)
T ss_pred hccccchHHhhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHhhccchHHhHHHHhcchhhHHHHHHHHh
Confidence 9999999999999999999999999 555555555544443 34344444433333333333333333333222222
Q ss_pred hhhhhhhccccc-chhhHHhHHHHHHHHHHhHHHH-HHHHHHhhhchHHHHHHH
Q psy14075 305 ELGYLVDIRHTA-VYGSVYAIGDVAFCLGFAIGPA-MSGTLVNTIGFEWMLFII 356 (414)
Q Consensus 305 ~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~ig~~-~~g~l~~~~g~~~~~~~~ 356 (414)
...+....+ .+-+..+......+.++.++|. ..+.....+++...|...
T Consensus 391 ---w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~~~~ap~y~~~~~f~~~ 441 (495)
T KOG2533|consen 391 ---WTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFRSLDAPRYGWGAVFYML 441 (495)
T ss_pred ---hccccccchHHhHHHHhhhhcchhHHHHhhhhhcccccCcchhhhhHHHHH
Confidence 222332222 2233333333333444443333 333333345677777433
No 82
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.97 E-value=6e-29 Score=220.06 Aligned_cols=342 Identities=15% Similarity=0.167 Sum_probs=283.0
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHH
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---FGRTYGVLFLARSL 92 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l 92 (414)
+.+|.+++.+++|..|.+++..+++-++.+++++.|++.+|+|+|+.++.|..++++++.+.. ...++..++++-++
T Consensus 34 iLip~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~~~~y~~FL~~lFi 113 (422)
T COG0738 34 ILIPHLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAASSKSYGFFLVALFI 113 (422)
T ss_pred hhHHHHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHH
Confidence 457999999999999999999999999999999999999999999999999999999999984 66789999999999
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-------------------cCChhHH
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-------------------VGKTAPF 153 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-------------------~gw~~~f 153 (414)
.|.|.+...++...+++...++ ++..+.+++.+..+++|..++|++++.+..+ -.||++|
T Consensus 114 la~Gi~~LetaaNp~v~~lg~~-~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~~~~~~~~~~~v~~pY 192 (422)
T COG0738 114 LASGIGLLETAANPYVTLLGKP-ESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQILAIKGADASSVQFPY 192 (422)
T ss_pred HHhhhHHHHhccchHHHHhCCc-hhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHHHHHHHHHHHhhhhHH
Confidence 9999999999999999999985 8899999999999999999999999988862 2489999
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCC---Cc--hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc
Q psy14075 154 LILSALALGDGLLQLLLLQPGVVKQEVE---PP--TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW 228 (414)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 228 (414)
...+...++..+.....+.|+.++..++ +. ...+++|+|+++...+..+++-.......+|++.|+.+..|.+..
T Consensus 193 l~~~~~lvll~v~~~~~k~p~~~~~~~~~~~~~~~~~~~l~~~~~~~~gvl~~FlYVG~Eva~gsfl~~y~~~~~g~~~~ 272 (422)
T COG0738 193 LILAGLLVLLAVLILLSKLPDLQVAAPSLGASGSAGLSSLFQNKHLRLGVLAIFLYVGAEVAIGSFLVSYLEELLGLNEQ 272 (422)
T ss_pred HHHHHHHHHHHHHHHhccCCcCCcccccccccccchHHHHHhChHHHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCccHH
Confidence 9988888777776666553332222111 11 467899999999999999999999999999999999998899999
Q ss_pred chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy14075 229 QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGY 308 (414)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 308 (414)
++....+.+..+.++|++++.++.+|++..|.+........+.++...+.++... ....++.|+..+..+|...+...
T Consensus 273 ~aa~~~s~~~~~~~vGRFig~~lm~~~~~~k~Laf~a~~~ill~~~~~l~~g~v~-~~~l~~ig~F~simfPTIfslal- 350 (422)
T COG0738 273 QAAYYLSFFWVGFMVGRFIGSALMSRIKPEKYLAFYALIAILLLLAVALIGGVVA-LYALFLIGLFNSIMFPTIFSLAL- 350 (422)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHhcChHH-HHHHHHHHHHhHHHHHHHHHHHH-
Confidence 9999999999999999999999999999988888877776666666666666443 45567788888888777666643
Q ss_pred hhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy14075 309 LVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYA 364 (414)
Q Consensus 309 ~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 364 (414)
+..|++ ....|..-.+..+|+++-|++.|++.|..|....+......+.+.+
T Consensus 351 --~~l~~~--ts~~s~~l~maivGGAiiP~l~G~i~d~~g~~~~~~~~pllc~lyV 402 (422)
T COG0738 351 --KNLGEH--TSVGSGLLVMAIVGGAIIPPLQGVIADMFGIQLTFLIVPLLCYLYV 402 (422)
T ss_pred --hccCcc--ccccceeeeeheecchHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 444422 2233333344568999999999999999998777775555555544
No 83
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.97 E-value=4e-29 Score=266.24 Aligned_cols=340 Identities=17% Similarity=0.179 Sum_probs=259.3
Q ss_pred hhhhhhhcCCc--chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHH
Q psy14075 19 ENRHKYLMGET--KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA---FGRTYGVLFLARSLQ 93 (414)
Q Consensus 19 ~~~~~~~g~s~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~ 93 (414)
+.+..+++.+. ...+++.+++.+++.++++++|+++||+|||++++++.++..+..++.. .+++++.+++.|+++
T Consensus 34 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 113 (1146)
T PRK08633 34 NTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYYLGWFWLAFAVTFLL 113 (1146)
T ss_pred HHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHH
Confidence 34445566543 4579999999999999999999999999999999998877666555443 457899999999999
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh--------c-CChhHHHHHHHHHHHHH
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF--------V-GKTAPFLILSALALGDG 164 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~--------~-gw~~~f~~~~~~~~~~~ 164 (414)
|++.+...++..+++.|++|+ ++|++++++.+.+.++|.++|+++++++.+. + +|++.+.+..+...+..
T Consensus 114 G~~~~~~~~~~~~~i~~~~~~-~~r~~~~~~~~~~~~ig~~lg~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 192 (1146)
T PRK08633 114 GAQSAIYSPAKYGIIPELVGK-ENLSRANGLLEAFTIVAILAGTALFSFLFESVNGNTPSEILGRIAPAGLVLLAVAVLG 192 (1146)
T ss_pred HHHHHhhchHHHhhhHHhcCc-ccchhhhhHHHHHHHHHHHHHHHHHHHHHHhhccccccccccchHHHHHHHHHHHHHH
Confidence 999999999999999999995 9999999999999999999999999999876 2 34454444444333333
Q ss_pred HHHHHhccCCCCCCCC-----C-------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc-chh
Q psy14075 165 LLQLLLLQPGVVKQEV-----E-------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW-QQG 231 (414)
Q Consensus 165 ~~~~~~~~~~~~~~~~-----~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~g 231 (414)
++..+..++.++.++. + ...++.++++|.++...+..++..........++|.|+.+.+|.+.. +.+
T Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~~g 272 (1146)
T PRK08633 193 LIFAYRLPKVPAAAPEVFDKKKYLFPKLLWRNLKLLRSDRVLWLAIIGLSYFWFISQLAQANFPAYAKEVLGLDNTFQVQ 272 (1146)
T ss_pred HHHHhcCcCCCCCCcccccccccccHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhCCCcHHHHH
Confidence 3333333333221111 0 11345567888888777766666666677788899999998999998 899
Q ss_pred hHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075 232 VSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311 (414)
Q Consensus 232 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 311 (414)
++.+...++.+++.++.+++.||+++++.+.++.++.+++.+++.+..+.+...+..++.|++.+...+... +...+
T Consensus 273 ~~~~~~~ig~~~g~~~~g~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~ 349 (1146)
T PRK08633 273 YLLAASAIGIGIGSLLAGRLSGRHIELGLVPLGALGLALSLFLLPTAPSLASVLVLFFLFGFSAGLFIVPLN---ALIQF 349 (1146)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCceEccchhHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHhhHHHH---HHHhh
Confidence 999999999999999999999999988888888888888777777776766666777778888777644433 34567
Q ss_pred cccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh-hchHHHHHHHHHHHHH
Q psy14075 312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT-IGFEWMLFIIAILDFM 362 (414)
Q Consensus 312 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-~g~~~~~~~~~~~~~~ 362 (414)
..|++.||+++|+.+++.++|..+++.+.+.+... .++...+.+.+.+.++
T Consensus 350 ~~p~~~rg~~~~~~~~~~~lg~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~ 401 (1146)
T PRK08633 350 RAPEKELGKVLAANNFLQNVGMLLFLALTTLFSGLGLSPAGLFYLIALVTLI 401 (1146)
T ss_pred cCCccchhhhhHHHHHHHHHHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHH
Confidence 78889999999999999999998888777665441 2344455554444433
No 84
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.97 E-value=6.7e-28 Score=229.63 Aligned_cols=354 Identities=14% Similarity=0.143 Sum_probs=269.4
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGS 97 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 97 (414)
++.+..|+|-+ ....|+.+...++.++..++.|+++|.||||.+++.+.++..+|.+.++-++|...++.+..+.|+|.
T Consensus 67 l~~I~~diG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i~g~~l~vvG~Iv~atA~~~~~~iag~~l~Gvga 145 (599)
T PF06609_consen 67 LPYINADIGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFIIGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGA 145 (599)
T ss_pred HHHHHHhcCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHHHHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhh
Confidence 47788899886 57799999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy14075 98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVK 177 (414)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 177 (414)
|..... ...++|..| .|.|....++.....-.....++.++..+..+.+|||.|++..+...+..++.+++..|++++
T Consensus 146 G~~~~~-~~~isEl~p-~k~R~~~~~~~~~~~i~~~~~~~~ia~~~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~~ 223 (599)
T PF06609_consen 146 GVQELA-ALAISELVP-NKWRGLGLAIASIPFIITTWISPLIAQLFAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPRA 223 (599)
T ss_pred HHHHHH-HHHHHHhcc-cchhhhHhHHHHHHHHhhhcccHHHHHHhccCCCcchHHHHHHHHHHHHHHHHHHHhCCCchh
Confidence 777654 566899999 599998888877776666678888887777777999999999998777666555444333211
Q ss_pred C--CCC--Cc---------------------------------h----------------------------------hh
Q psy14075 178 Q--EVE--PP---------------------------------T----------------------------------LK 186 (414)
Q Consensus 178 ~--~~~--~~---------------------------------~----------------------------------~~ 186 (414)
+ .++ ++ + ..
T Consensus 224 ~~~~~~~s~~~~l~~lD~IG~~L~~~Gl~LfLlgl~wgG~~~~~W~Sa~VIa~lviG~~~Lv~F~~wE~~~~~~~Pl~P~ 303 (599)
T PF06609_consen 224 QLHGRKLSKREQLKELDWIGIFLFIAGLALFLLGLSWGGYPYYPWKSAHVIAPLVIGFVLLVAFVVWEWFGAPKDPLFPH 303 (599)
T ss_pred hhccccCcHHHHHHHhhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCccchhhHHHHHHHHHHHHHhhhhccCCCCcCCH
Confidence 1 000 00 0 12
Q ss_pred hhccCh-HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc---chhhHhHHHHHHHHhhhhhhhhhhhhhhh-HHHH
Q psy14075 187 SLVMDP-YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW---QQGVSFLPASISYLIGTNLFGPLGHRMGR-YLAA 261 (414)
Q Consensus 187 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~---~~g~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~ 261 (414)
+++|++ .+....+..++....++....+.|......++-++. ..++.....+++..++.++.+.+..+++| |+.+
T Consensus 304 ~Lf~~~r~~~~~lvi~fi~G~~~~s~~~l~p~~~~~vf~~d~~~~~~~~~~s~~~~fg~~~g~~i~g~l~~~ir~~Kw~l 383 (599)
T PF06609_consen 304 RLFKDRRGFAALLVISFISGMNFFSVNILWPQQVVNVFGSDPISITEIGWISSPVGFGSCAGAVILGLLFSKIRHIKWQL 383 (599)
T ss_pred HHhccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCcccceeehhhhhHHHHHHHHHHHHHHHHHHccchhHHH
Confidence 567764 455555666666667777778888888777776653 56788888899999999999999988877 4445
Q ss_pred HHHHHHHHHHHHHhhhh--hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075 262 LLGLLIIGICLMMIPLA--RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM 339 (414)
Q Consensus 262 ~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~ 339 (414)
+++..++.+++..+... ++....+...++.|++.|..........+ -..|++..|.+.|+..+.+.+|+.+|..+
T Consensus 384 i~~~~~~ta~~Gama~~~~~n~~~~i~~~~l~g~giG~~~~~~~~~~q---l~~p~~~ig~a~gL~~s~R~~GGsIg~aI 460 (599)
T PF06609_consen 384 IFGSVLMTAFCGAMAAVRPDNKNAAIAFLVLAGFGIGGILVPAIVIAQ---LIVPDEDIGTATGLTGSIRSIGGSIGYAI 460 (599)
T ss_pred HHHHHHHHHHHHHHHHccCCCcchHHHHHHHHHHhHHHHHHHHHHeeE---eeeCchHHHHHHHHHHHHHHHhhHHHHHH
Confidence 56766666654444432 34445567777888888876544443332 24556778999999999999999999998
Q ss_pred HHHHHhh--------------------------------------------------------------hchHHHHHHHH
Q psy14075 340 SGTLVNT--------------------------------------------------------------IGFEWMLFIIA 357 (414)
Q Consensus 340 ~g~l~~~--------------------------------------------------------------~g~~~~~~~~~ 357 (414)
...+..+ .+|+++|+...
T Consensus 461 y~~I~~n~~~~~l~~~v~~a~~~aglp~~sl~~li~a~~~~~~~a~~~iPGit~~i~~a~~~A~~~aYa~ay~~V~~~si 540 (599)
T PF06609_consen 461 YNAIFTNKLPKELPKYVAPAALAAGLPESSLPALIEALAAGNLEALAAIPGITPEIIAAVVAAFQEAYAHAYRYVYYSSI 540 (599)
T ss_pred HHHHHHhhhhHhHHHHHHHHHHhcCCChhhHHHHHHHHhccChhHHhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8776643 34788888888
Q ss_pred HHHHHHHHHHHHhcCCCchh
Q psy14075 358 ILDFMYAPLLYLLRNPPTKE 377 (414)
Q Consensus 358 ~~~~~~~~~~~~~~~~~~~~ 377 (414)
.+..++++..++++..++.-
T Consensus 541 aFG~vaiiaa~fl~d~~~~m 560 (599)
T PF06609_consen 541 AFGVVAIIAALFLGDIDKYM 560 (599)
T ss_pred HHHHHHHHHHHHcCChHHhh
Confidence 88888888888887655443
No 85
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.97 E-value=9.2e-28 Score=230.23 Aligned_cols=350 Identities=13% Similarity=0.119 Sum_probs=262.4
Q ss_pred chhhh-hh--hcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy14075 18 RENRH-KY--LMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ 93 (414)
Q Consensus 18 ~~~~~-~~--~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 93 (414)
+|.+. ++ +|.+..+.|++.+.+.+++.++++++|+++|| +||||++.++.++.+++.++.+++++++.+++.|++.
T Consensus 33 L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~~~~~~~g~~~~~~~~~~~~~~~~~~l~ 112 (475)
T TIGR00924 33 LAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLGGIVLMLGHFMLAMSIYPDLIFYGLGTI 112 (475)
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHHHHHHHHHHHHHHhcccHhHHHHHHHHH
Confidence 34453 44 89999999999999999999999999999999 8999999999999999999999999999999999999
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcc---hhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHh
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDR---ERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLL 170 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~---~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 170 (414)
|+|.|...+...++++|++|+ + +|++++++++.+.++|..+||.+++++.+++|||+.|.+.++..++..+.....
T Consensus 113 g~g~g~~~~~~~~~~a~~~~~-~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~~~~g~~~~f~~~~~~~~~~~l~~~~~ 191 (475)
T TIGR00924 113 AVGSGLFKANPSSMVGKLYER-GDMPRRDGGFTLFYMSINIGSFISPLLAGVIAENYGYHVGFNLAAVGMVIGLLTFFAG 191 (475)
T ss_pred HhccccccCCHHHHHHHhcCC-CCcccccceehhHHHHHHHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHc
Confidence 999999999999999999984 4 488899999999999999999999999998999999999886555544333332
Q ss_pred ccC---CCCCCC---CCCchh---------------------------------------------------hhhccCh-
Q psy14075 171 LQP---GVVKQE---VEPPTL---------------------------------------------------KSLVMDP- 192 (414)
Q Consensus 171 ~~~---~~~~~~---~~~~~~---------------------------------------------------~~~~~~~- 192 (414)
.++ .+++++ +++.+. .+.-|+|
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (475)
T TIGR00924 192 RHMLRDIGSVPDPLSGQGKTYGKLLLALLAALALVFFCAWLMHHVVIANILLMTVTLAVIIFFFRLAFKPRLDAVARNKM 271 (475)
T ss_pred ccccccCCCCCCCcchhhhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHhHH
Confidence 211 111110 000000 0000111
Q ss_pred -HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc----hhhHhHHHHHHHHhhhhhhhhhhhhhhh-----HHH--
Q psy14075 193 -YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ----QGVSFLPASISYLIGTNLFGPLGHRMGR-----YLA-- 260 (414)
Q Consensus 193 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~g~l~d~~~~-----~~~-- 260 (414)
.+..+.+...+.+..+....+.++.+.++..+.+... .+++.+...+..++..++..++-.|.+| +..
T Consensus 272 ~~~l~l~~~~~~~~~~~~Q~~s~l~l~~~~~~~~~~~~~~ip~~~~~~~n~~~iil~~p~~~~~~~~l~~~~~~~~~~~k 351 (475)
T TIGR00924 272 YAYIVLFLEAVVFWVLYAQMPTSLNFFADNNMHHEMLGMSVPVIWFQSLNPFWVVVGSPVLAMIWTRLGRKGKDPTTPLK 351 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccccccceEECHHHHHhhhHHHHHHHHHHHHHHHHHHHhCCCCCCcHHH
Confidence 2333445555666777777777888877754443222 5678888888888877765544333333 222
Q ss_pred HHHHHHHHHHHHHHhhh---------hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHH
Q psy14075 261 ALLGLLIIGICLMMIPL---------ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCL 331 (414)
Q Consensus 261 ~~~~~~~~~i~~~~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~ 331 (414)
+.+|.++.+++++.+.+ ..+.+..+...++.+++.....|.... ...+..|++.||+.+|+......+
T Consensus 352 ~~~G~~l~~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~~~~~ge~~~~p~~~~---~~~~~aP~~~~g~~~g~~~l~~~~ 428 (475)
T TIGR00924 352 FTLGMLFCGASFLTFAASIWFADAGGLTSPWFMVLIYLFQTLGELMISPLGLS---WWTKIAPQRLMGQMLGMWFLAQAM 428 (475)
T ss_pred HHHHHHHHHHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHH---HHHHhCCHHHHHHHHHHHHHHHHH
Confidence 36788888887776654 346777788888999999988666554 466888899999999999999999
Q ss_pred HHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 332 GFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 332 g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
|..+++.+.....+..++...|...++.+++..++.++..
T Consensus 429 g~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 468 (475)
T TIGR00924 429 GSLLGGYLATFGAVPQGVTGVFGKIGLVTLLVGVVMALMV 468 (475)
T ss_pred HHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999988887777888888877777776666655443
No 86
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.97 E-value=2.9e-27 Score=222.63 Aligned_cols=346 Identities=16% Similarity=0.140 Sum_probs=251.8
Q ss_pred ccchhhhhhhcCCcchHHHH--HHHHHHHHHHhhhHHHH-hhcccCCchhHHHHHHH-HHHHHHHHH---hhhh-HHHHH
Q psy14075 16 VARENRHKYLMGETKAVGVM--FGSKAFVQLLANPLVGI-LTHRVGYSLPMFTGFVI-MFLSTLIFA---FGRT-YGVLF 87 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~--~s~~~~~~~~~~~~~G~-l~dr~Grr~~l~~~~~~-~~~~~~~~~---~~~~-~~~l~ 87 (414)
+..|.+.+|.|.|++++|++ .+...+...+.+|++++ ..||+||||..++...+ .+......+ ...+ ...++
T Consensus 22 p~lp~~l~~~g~~~~~iGl~~~~~l~~~~~~l~~p~~~~~~~~~~g~r~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (390)
T TIGR02718 22 DALPTLLREDGAPLTALAFLPLVGLPWVVKFLWAPLVDNWWSWRLGRRRSWVLPMQCLVSACLASLALVGPDVAGAGWAV 101 (390)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcchhHHHHHHHHHHHHHHHHHcCCcchhhHHHHH
Confidence 35688889999999999997 46778888889999955 79999999997555533 222222222 2222 33444
Q ss_pred HHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHH
Q psy14075 88 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQ 167 (414)
Q Consensus 88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~ 167 (414)
..-++.++..+...+...++..|..+ +++++...+....+..+|..+|+.+.+++.+++|||.+|++.+++.++..+..
T Consensus 102 ~~~~~~~~~~a~~d~~~d~~~~~~~~-~~~~~~~~~~~~~g~~lG~~~g~~~~~~l~~~~gw~~~f~~~a~l~~~~~~~~ 180 (390)
T TIGR02718 102 GLLACASLASATQDIATDGMAAEHFN-GRTLAKGNAVQIAGVMIGFFGGGAGTLVLFGKFGQRPAFLLVACVPLASLVCV 180 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCC-HhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 45566667778888888888889888 48889899999999999999999999999999999999999999888777766
Q ss_pred HHhccCCCCCCC---CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHH-HHHh
Q psy14075 168 LLLLQPGVVKQE---VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASI-SYLI 243 (414)
Q Consensus 168 ~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~ 243 (414)
++..|+++++++ ++..+.++.+|+|.++......++..........+.+.|++| .|+++.+.|......+. ..++
T Consensus 181 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~-~G~s~~~ig~~~~~~~~~~~~~ 259 (390)
T TIGR02718 181 LWLKDRAVASPEAPLARRASLFRFFRRPLAWSLLALALLSAMTAVSGFGLSKLYLVD-AGWPLEWIGRLGMAGGAVTVLL 259 (390)
T ss_pred HHcCCCCcCccccchhhHHHHHHHHcCcCHHHHHHHHHHHHHHHHHHHHHhhHHHHh-cCCCHHHHHHHHhHHHHHHHHH
Confidence 655554332211 122346688899988877777777777777778888999988 69999999998887764 6667
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh-h-----hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccc-c
Q psy14075 244 GTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL-A-----RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHT-A 316 (414)
Q Consensus 244 ~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~-~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~ 316 (414)
+.++.|++.||+++|+.+..+..+.++..+.... . ++.........+.+++.+...+...+. ..+..++ +
T Consensus 260 g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~ 336 (390)
T TIGR02718 260 GCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSAFGSLITGITSVAIYTA---FMRFAGDGD 336 (390)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhCccc
Confidence 7899999999999999888776655333222211 1 112222222333344455554434433 3333444 7
Q ss_pred chhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075 317 VYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366 (414)
Q Consensus 317 ~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 366 (414)
.+++.++..+...++|..++|.+.|.+.|..|++..|...+++.+++...
T Consensus 337 ~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 337 QAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999999999999999999998887776665443
No 87
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.96 E-value=2.7e-27 Score=227.01 Aligned_cols=350 Identities=11% Similarity=0.098 Sum_probs=247.1
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhhHHH-HHHHHHHHhhh
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRTYGV-LFLARSLQGIG 96 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~-l~~~r~l~G~~ 96 (414)
..+.+++|.+.++.+++.+.+.....+..+++|+++|| +||||+++++.++++++.++++++++... ++++|+++|+|
T Consensus 39 ~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~g~~~~~~~~~~~~ll~~~~~l~~ig 118 (489)
T PRK10207 39 VFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAIGYFMTGMSLLKPDLIFIALGTIAVG 118 (489)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHhc
Confidence 34567899999999999999998888889999999999 99999999999999999999999876554 55899999999
Q ss_pred hhhhhhhHHHHHhhcCCCcc-hhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc---
Q psy14075 97 SSCSSVSGMGMLAERYPDDR-ERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ--- 172 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~-~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~--- 172 (414)
.|...|...+++.|++|+++ +|+++++++..+.++|..+||.+++++.+++|||+.|++.++. ++..++.+...+
T Consensus 119 ~g~~~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~gw~~~F~i~~i~-~~~~~~~~~~~~~~~ 197 (489)
T PRK10207 119 NGLFKANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKFGYSVTYNLCGAG-LIIALLVYFACRGMV 197 (489)
T ss_pred cccccCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHHHHcchhh
Confidence 99999999999999998522 4588999999999999999999999999999999999986553 333333332222
Q ss_pred -CCCCCCCCCCchh-------------------------------------------------hhhccChHHHHHH--HH
Q psy14075 173 -PGVVKQEVEPPTL-------------------------------------------------KSLVMDPYILIAA--GA 200 (414)
Q Consensus 173 -~~~~~~~~~~~~~-------------------------------------------------~~~~~~~~~~~~~--~~ 200 (414)
+.+++.++++.+. .+.+|+|.+.... +.
T Consensus 198 ~~~~~~~~~~~~d~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~f~~~~~~~~~~~r~r~~~~~~l~~~ 277 (489)
T PRK10207 198 KDIGSEPDHKPMSFSKLLLVLLGSVVMIFVCAWLMHNVEVANLVLIVLSIVVTIIFFREAFKLDKTGRNKMFVAFVLMLE 277 (489)
T ss_pred cccCCCCCccchhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Confidence 1100000000000 0122333333222 22
Q ss_pred HHHHHHHHHhhhhchHHHHHHHhCCCc----cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHH-------HHHHHHHHHH
Q psy14075 201 ITFANTGIAMLEPSLPIWMMDTMGADK----WQQGVSFLPASISYLIGTNLFGPLGHRMGRYL-------AALLGLLIIG 269 (414)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~g~~~----~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~-------~~~~~~~~~~ 269 (414)
..+.+..+......++.+.++..+.+. .....+.....+..++..++.+++.||+++|+ .+.+|+++.+
T Consensus 278 ~~~f~~~~~q~~~~l~l~~~~~~~~~~~G~~i~~~~~~~~n~~~iii~~pl~~~l~~rl~~r~~~~~~~~k~~~G~~l~~ 357 (489)
T PRK10207 278 AVVFYILYAQMPTSLNFFAINNVHHEILGFSINPVSFQALNPFWVVVASPILAGIYTHLGSKGKDLSMPMKFTLGMFLCS 357 (489)
T ss_pred HHHHHHHHHHcccHHHHHHHHhccccccceEECHHHHHhHhHHHHHHHHHHHHHHHHHHhhCCCCCCcHHHHHHHHHHHH
Confidence 344555566666778888875333221 01233444455667677788899999998875 3566777777
Q ss_pred HHHHHhh-----hh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075 270 ICLMMIP-----LA-----RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM 339 (414)
Q Consensus 270 i~~~~~~-----~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~ 339 (414)
++++.+. .. .+.+......++.|++.++..+... ....+..|++.+|.++|+.+...++|+.++..+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~s~~~~i~~~~l~g~Ge~~~~~~g~---~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l 434 (489)
T PRK10207 358 LGFLTAAAAGMWFADAQGLTSPWFIVLVYLFQSLGELFISALGL---AMIAALVPQHLMGFILGMWFLTQAAAFLLGGYV 434 (489)
T ss_pred HHHHHHHHHHHhhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHH---HHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6654321 11 2345556677888899888865544 346677889999999999999999999999888
Q ss_pred HHHHHh----------hhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 340 SGTLVN----------TIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 340 ~g~l~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
...... ...+.+.|...++..++..++.+...+
T Consensus 435 ~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~v~~~~~~~ 477 (489)
T PRK10207 435 ATFTAVPDNITDPLETLPVYTNVFGKIGLVTLGVAVVMALMVP 477 (489)
T ss_pred HHHhccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 765521 112567777777666666665555443
No 88
>KOG0569|consensus
Probab=99.96 E-value=1.9e-26 Score=214.42 Aligned_cols=342 Identities=16% Similarity=0.147 Sum_probs=258.2
Q ss_pred hHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh---hhhHHHHHHHHHHHhhhhhhhhhhHHHH
Q psy14075 31 AVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF---GRTYGVLFLARSLQGIGSSCSSVSGMGM 107 (414)
Q Consensus 31 ~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~---~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 107 (414)
..+.+.+++.+|.++++...|.++||+|||..+.++.++..++.++..+ .+++++++++|++.|+..|.......-+
T Consensus 61 lwS~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~pmy 140 (485)
T KOG0569|consen 61 LWSLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVPMY 140 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 3477789999999999999999999999999999999888888777665 5789999999999999999999999999
Q ss_pred HhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhh--HhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC----C----
Q psy14075 108 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGG--IMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV----K---- 177 (414)
Q Consensus 108 i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~--~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~----~---- 177 (414)
+.|..| ++.||..-...+.+..+|.+++..++. .+-+.-.|++.+....+++++..++..+.++.++. +
T Consensus 141 l~E~sP-~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~Ll~~k~~~~ 219 (485)
T KOG0569|consen 141 LTEISP-KNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKYLLIKKGDEE 219 (485)
T ss_pred HhhcCh-hhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcchHHHHcCCHH
Confidence 999999 599999999999999999999977762 23344569999999999888877776665543220 0
Q ss_pred -------------------------------CCCCCchhhhhccChHHHHH-----HHHHHHHHHHHHhhhhchHHHHHH
Q psy14075 178 -------------------------------QEVEPPTLKSLVMDPYILIA-----AGAITFANTGIAMLEPSLPIWMMD 221 (414)
Q Consensus 178 -------------------------------~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~ 221 (414)
+++++.+++++++||..... .+.......+.+....|...++++
T Consensus 220 ~A~~sl~~y~G~~~~~~~~e~~~~e~~~~~~~~~~~~sl~~~~~~~~lR~~~~i~~~v~~~qq~sGi~ai~~Yst~i~~~ 299 (485)
T KOG0569|consen 220 EARKALKFYRGKEDVEAEIEEMLREIEEEELEKKKQISLRQLLKNPTLRRPLLIGIVVSFAQQFSGINAIFFYSTSIFKT 299 (485)
T ss_pred HHHHHHHHHhCCCcchhHHHHHHHHHHHhccccccCCcHHHHhcCcchhHHHHHHHHHHHHHHhcCcceeHHHHHHHHHH
Confidence 00122356678887654432 222222334444555566666665
Q ss_pred HhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh---h-h--HH---HHHHHHHHH
Q psy14075 222 TMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR---N-I--NH---LIVPNAGLG 292 (414)
Q Consensus 222 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~-~--~~---~~~~~~~~g 292 (414)
.|++..++.+.....++...+..+++.++.||.|||++++.+..++.+..+++.... + . |. .+.+.+++.
T Consensus 300 -aG~~~~~a~~an~~~g~v~~~~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~l~~~~~~~~~y~~i~~~~~~~ 378 (485)
T KOG0569|consen 300 -AGFTPEEAQYANLGIGIVNLLSTLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALFLSNSFGSWLSYLCIAAIFLFI 378 (485)
T ss_pred -cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 599999999999999999999999999999999999999999999988877665421 1 1 11 123344444
Q ss_pred HHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH-hc
Q psy14075 293 FAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYL-LR 371 (414)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~~ 371 (414)
++++....... .-...|.+|++.|..+.+.......+..++-...+..+.+..|- ..|....+.+++..+..+. ++
T Consensus 379 ~~f~~G~gpi~--~fi~aELf~~~~R~aa~s~~~~~~w~~~fiv~~~fp~l~~~~g~-~~filF~i~~~~~~i~~~~~lP 455 (485)
T KOG0569|consen 379 ISFAIGPGPIP--WFIGAELFPQSARSAAQSVATAVNWLSNFIVGFAFPPLQNVIGP-YVFILFVIPLAIFLIYLYRYLP 455 (485)
T ss_pred HhhhcCCCchh--HHHHHHhCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc-hhhHHHHHHHHHHHHHHHHhCc
Confidence 44444433222 23477999999999999999999999999999999999999996 5666666666665555544 44
Q ss_pred CCCchh
Q psy14075 372 NPPTKE 377 (414)
Q Consensus 372 ~~~~~~ 377 (414)
+.+.|.
T Consensus 456 ETkgr~ 461 (485)
T KOG0569|consen 456 ETKGRT 461 (485)
T ss_pred ccCCCC
Confidence 444443
No 89
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.96 E-value=8.5e-27 Score=213.59 Aligned_cols=317 Identities=13% Similarity=0.047 Sum_probs=237.7
Q ss_pred ccchhhhhhhcCCcch-HHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHh
Q psy14075 16 VARENRHKYLMGETKA-VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQG 94 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~-~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G 94 (414)
++.|.+.+|+|+|++| .|.+.+.++.+|++++++.|+++||+|.|+++.++.+.+++.+++.++++++..+.+.|++.|
T Consensus 47 ~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~llG 126 (511)
T TIGR00806 47 FITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFYS 126 (511)
T ss_pred HHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3567888999999999 999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHH---HHHHHHHHHHHHHhc
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLIL---SALALGDGLLQLLLL 171 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~---~~~~~~~~~~~~~~~ 171 (414)
++.|... +...++.+|+| +++|+++.++...+..+|.+++++++++ ...+|||+-+... .....++.++.++++
T Consensus 127 vaEA~~~-A~~syI~~WfP-~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~~LP 203 (511)
T TIGR00806 127 VTMAARI-AYSSYIFSLVP-PSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLALFLK 203 (511)
T ss_pred HHHHHHH-HHHHHHHHHCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHHhCC
Confidence 9999999 88999999999 5999999999999999999999999999 5568999754433 233333344444443
Q ss_pred cCCC------CC-----------CC-CC----C----------------chhhhhccChHHHHHHHHHHHHHHHHHhhhh
Q psy14075 172 QPGV------VK-----------QE-VE----P----------------PTLKSLVMDPYILIAAGAITFANTGIAMLEP 213 (414)
Q Consensus 172 ~~~~------~~-----------~~-~~----~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (414)
++++ ++ .. ++ . .++++..+||.+..-.+-..+...++..+.+
T Consensus 204 ~~~~sl~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~y~n~~vl~WSlWwa~a~~g~~qv~~ 283 (511)
T TIGR00806 204 RPKRSLFFNRLEDVRGALPCELDQMVPGPGGKLEDYLGTCRDSFLVRMLSELVTIYRNPQLLLWSLWWVFNSAGYYLITY 283 (511)
T ss_pred CCchhhhhccccccccccccccccCCCCCccccchhhhhhhhHHHHHHHHHHHHHhcCcchhhhhHHHHHHhhHHHHHHH
Confidence 2211 00 00 00 0 0122345677777666777777788887777
Q ss_pred chHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhh--HHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q psy14075 214 SLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR--YLAALLGLLIIGICLMMIPLARNINHLIVPNAGL 291 (414)
Q Consensus 214 ~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (414)
+.....++.-+-++.-.|..-++..+.+.+..+..|++-.++.+ ...+.+..++.+..++++.+.++.|..++.-+++
T Consensus 284 Y~Q~LW~~v~~~~~~yNG~veA~~tllga~~a~~ag~~~~~w~~~~~l~l~v~s~~~~gll~~m~~t~~Iw~~Y~~yvlf 363 (511)
T TIGR00806 284 YVHTLWGTLDESLNKYNGAVDAASTLLGAITSFIAGFVNIRWARWSKLLIAVVSAIQAGLVFWMSQSHDIWVLYVTYVLF 363 (511)
T ss_pred HHHHHHHHcCCCccccCCHHHHHHHHHHHHHHHHHHhhcCCchhhHHHHHHHHHHHHHHHhhhhhcccchHHHHHHHHHH
Confidence 77766655433222245666677777788888888888665544 2344445566666677788889999999988888
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHH
Q psy14075 292 GFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPA 338 (414)
Q Consensus 292 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~ 338 (414)
+..+.+..+.... .++.....+..|..+|+.++..-+-..+-..
T Consensus 364 ~~~y~flitia~~---~iA~~L~~~~~aLvFGiNtfvAl~LQtilT~ 407 (511)
T TIGR00806 364 RGIYQFLVPIATF---QIASSLSKELCALVFGINTFVATALKTIITA 407 (511)
T ss_pred HHHHHHHHHHHHH---HHHHHhcccceEEEEecHHHHHHHHHHheEE
Confidence 8888877544333 3555556677799999987766555544443
No 90
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.96 E-value=2.6e-27 Score=233.26 Aligned_cols=256 Identities=15% Similarity=0.186 Sum_probs=214.9
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh--------------
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR-------------- 81 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-------------- 81 (414)
..++.++++++++.++.|++.+.+.++++++.++.|++.||+||||.+.++.++++++++++++.+
T Consensus 54 ~~l~~iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~~~~ 133 (633)
T TIGR00805 54 SSLTTIERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTTVSS 133 (633)
T ss_pred hhchhhhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCccccccccc
Confidence 456889999999999999999999999999999999999999999999999999999999998763
Q ss_pred -------------------------------------hHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHH
Q psy14075 82 -------------------------------------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGI 124 (414)
Q Consensus 82 -------------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~ 124 (414)
.+..++++|+++|+|.+..++...+++.|++|+ ++|++++++
T Consensus 134 ~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~~~i~d~~~~-~~~~~~~~i 212 (633)
T TIGR00805 134 TGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGISYIDDFAKS-KNSPLYIGI 212 (633)
T ss_pred cccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCchhhhccCCc-cccHHHHHH
Confidence 245678999999999999999999999999995 999999999
Q ss_pred HHHHHhhhhhhchhhhhHhhhhc----------------------CChhHHHHHHHHHHHHHHHHHHhccCCCCCCC---
Q psy14075 125 ALGGLALGVLIGPPFGGIMYQFV----------------------GKTAPFLILSALALGDGLLQLLLLQPGVVKQE--- 179 (414)
Q Consensus 125 ~~~~~~~g~~ig~~l~~~l~~~~----------------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~--- 179 (414)
++....+|..+|+++++.+.+.+ +|+..|++.+++.++..++.++++++.+++++
T Consensus 213 ~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~lp~~~~~~~ 292 (633)
T TIGR00805 213 LESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKALPKEGKRVN 292 (633)
T ss_pred HHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCcccccc
Confidence 99999999999999999988643 27778988888888877665555433221100
Q ss_pred ------------CC-------------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHh
Q psy14075 180 ------------VE-------------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSF 234 (414)
Q Consensus 180 ------------~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 234 (414)
++ ....+++++||.++...+..++.......+.+++|.|+++++|+++.+++++.
T Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~n~~f~~~~l~~~~~~~~~~~~~~~lP~yl~~~~g~s~~~ag~l~ 372 (633)
T TIGR00805 293 VDVHETEKLEKSEDKSRKKNSDITKDFPKIIKRLLCNPIYMLVILAQVIDSLAFNGYITFLPKYLENQYGISSAEANFLI 372 (633)
T ss_pred hhhhhhhcccccccccchhhhhhHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHh
Confidence 00 01245678999999999999999999999999999999999999999999998
Q ss_pred HHHHH-HHHhhhhhhhhhhhhhh--hHHHHHHHHHHHHHHH
Q psy14075 235 LPASI-SYLIGTNLFGPLGHRMG--RYLAALLGLLIIGICL 272 (414)
Q Consensus 235 ~~~~~-~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~i~~ 272 (414)
....+ +.+++.++.|+++||++ .|+.+..+.+...++.
T Consensus 373 ~~~~i~~~~vG~~l~G~l~~r~~~~~~~~~~~~~~~~~~~~ 413 (633)
T TIGR00805 373 GVVNLPAAGLGYLIGGFIMKKFKLNVKKAAYFAICLSTLSY 413 (633)
T ss_pred hhhhhhHHHHHHhhhhheeeeecccHHHHHHHHHHHHHHHH
Confidence 87776 56889999999999987 4566666665555553
No 91
>PRK09669 putative symporter YagG; Provisional
Probab=99.96 E-value=7.7e-26 Score=216.39 Aligned_cols=331 Identities=15% Similarity=0.079 Sum_probs=240.7
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc----cCCc-hhHHHHHHHHHHHHHHHHhhhh------HHHH
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYS-LPMFTGFVIMFLSTLIFAFGRT------YGVL 86 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l 86 (414)
.+.+.+++|+|+.++|.+.++..+..++..|+.|.++|| +||| +.++.+.+..+++..+....++ ++.+
T Consensus 33 ~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f~~p~~~~~~~~~~~ 112 (444)
T PRK09669 33 AYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTFYTPDFGATGKIIYA 112 (444)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHHhCCCCCcchHHHHH
Confidence 456678899999999999999999999999999999999 7875 5566787888877766555543 4566
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-------hcCChhHHHHHHHH
Q psy14075 87 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-------FVGKTAPFLILSAL 159 (414)
Q Consensus 87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gw~~~f~~~~~~ 159 (414)
++..++.+.+......+..++.+|+.++.++|++..++......+|..+++.+...+.. ..+|+..+.+.+++
T Consensus 113 ~~~~~l~~~~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~~~~~~g~~~~~~i~~ii 192 (444)
T PRK09669 113 CVTYILLSLVYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGKGDEQKGYFYAMMVMGLL 192 (444)
T ss_pred HHHHHHHHHHHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 66777778777777777889999998655889999999998888888888765544433 24688888888888
Q ss_pred HHHHHHHHHHhccCCCCCCCCC----CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhH
Q psy14075 160 ALGDGLLQLLLLQPGVVKQEVE----PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFL 235 (414)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 235 (414)
.++..+..++..+|++++++++ .++.++++|||.++......++............+.|.++..+. +...+.+..
T Consensus 193 ~~v~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~n~~~~~l~~~~~~~~~~~~~~~~~~~y~~~~~~~~-~~~~~~~~~ 271 (444)
T PRK09669 193 GVVLFFCCFFMTKERYTPEVDNSSSVWKDLKLLLGNSQWRIMFIFNVVLLTAVVTRGGATLYYVNYVLLR-PDLATLFLV 271 (444)
T ss_pred HHHHHHHHhCCeEEecCCCCcCCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhhheeeeeecCC-HHHHHHHHH
Confidence 7777666665555442221111 23467788999988877766666555554444444444444432 333444555
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh--hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy14075 236 PASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL--ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR 313 (414)
Q Consensus 236 ~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 313 (414)
...+..+++.++.+++.||+|+|+....+..+..+..+.+.+ .++.+...+..++.|++.+...+...+..++..|..
T Consensus 272 ~~~i~~ii~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~ 351 (444)
T PRK09669 272 TGMIAGLFGALLSERLLGKFDRVRAFKWTIVAFVILSALIFFIPPSNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYE 351 (444)
T ss_pred HHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 566778888889999999999999888777665543332222 235555666777889999888877777776666532
Q ss_pred ----cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075 314 ----HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF 349 (414)
Q Consensus 314 ----~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~ 349 (414)
.++..|..+|..+....+|.++|+.+.|.+.+..||
T Consensus 352 e~~~G~r~~g~~~s~~~~~~klg~alg~~i~g~ll~~~Gy 391 (444)
T PRK09669 352 EKRSGRRLDGLVFSTNLFAIKLGLAIGGAVVGWILAWVDY 391 (444)
T ss_pred hhhcCcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 233457888999999999999999999999998776
No 92
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.95 E-value=3.7e-25 Score=213.48 Aligned_cols=349 Identities=12% Similarity=0.128 Sum_probs=233.8
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhh
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARSLQGIG 96 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~ 96 (414)
+.+.+++|.+.++.+++.+.+........+++|+++|| +|||+.+..+.++.+++..++++++ +.+.+++.|+++|++
T Consensus 46 ~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig 125 (500)
T PRK09584 46 VYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIMLGAIVLAIGYALVAWSGHDAGIVYMGMATIAVG 125 (500)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHh
Confidence 34468899999999999888877767777899999999 5999999999999999999998874 566777889999999
Q ss_pred hhhhhhhHHHHHhhcCCCc-chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHH---HHHHhcc
Q psy14075 97 SSCSSVSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGL---LQLLLLQ 172 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~---~~~~~~~ 172 (414)
.|...+...+++.|++|++ ++|..++++++.+.++|..++|.+++++.+++|||+.|++.++..++..+ ......+
T Consensus 126 ~g~~~~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~l~~~~g~~~~F~i~~i~~~i~~i~~~~~~~~~~ 205 (500)
T PRK09584 126 NGLFKANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPWLAAKYGWSVAFALSVVGMLITVVNFAFCQRWVK 205 (500)
T ss_pred hhcccCCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHhHHHhc
Confidence 9999999889999999742 23556889999999999999999999999999999999998765444332 2222333
Q ss_pred CCCCCCCCCCchhh-------------------------------------------hhcc-----ChHHHHHHHHHHHH
Q psy14075 173 PGVVKQEVEPPTLK-------------------------------------------SLVM-----DPYILIAAGAITFA 204 (414)
Q Consensus 173 ~~~~~~~~~~~~~~-------------------------------------------~~~~-----~~~~~~~~~~~~~~ 204 (414)
+..++.+.++.+.. +..+ +++.+.. +..++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 284 (500)
T PRK09584 206 QYGSKPDFEPINYRKLLLTIVGVVALIAIATWLLHNQEIARMALGVVALGIVVIFGKEAFAMKGAARRKMIVA-FILMLE 284 (500)
T ss_pred cCCCCCCccccchhhHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHH-HHHHHH
Confidence 32111110000000 0000 1122222 222233
Q ss_pred HHHHHhhhhchHHHHHH--HhCCCc------cchhhHhHHHHHHHHhhhhhh----hhhhhhhhhHHHHHHHHHHHHHHH
Q psy14075 205 NTGIAMLEPSLPIWMMD--TMGADK------WQQGVSFLPASISYLIGTNLF----GPLGHRMGRYLAALLGLLIIGICL 272 (414)
Q Consensus 205 ~~~~~~~~~~~~~~~~~--~~g~~~------~~~g~~~~~~~~~~~~~~~~~----g~l~d~~~~~~~~~~~~~~~~i~~ 272 (414)
...++......|.++.. ..+.+. ...+++.+...+..++..++. +++.+|.+..+.+.+++++.++++
T Consensus 285 ~i~f~~~~~q~~~~l~~~~~~~~~~~~~g~~i~~~~~~s~n~i~iil~~p~~~~~~~~l~~r~~~~~~~~~G~~l~~l~f 364 (500)
T PRK09584 285 AIIFFVLYSQMPTSLNFFAIRNVEHSILGIAVEPEQYQALNPFWIMIGSPILAAIYNKMGDRLPMPHKFAIGMVLCSGAF 364 (500)
T ss_pred HHHHHHHHHHhccHHHHHHHHhccccccceEECHHHHHHHhHHHHHHHHHHHHHHHHHhCcCCCcHHHHHHHHHHHHHHH
Confidence 34444444445554432 111121 124556666666666665555 555555556677888999999998
Q ss_pred HHhhhhhh---------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075 273 MMIPLARN---------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTL 343 (414)
Q Consensus 273 ~~~~~~~~---------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l 343 (414)
+.+....+ .+......++.+++..+..|..... +.+..|++.||+.+|.......+|..++..+.+..
T Consensus 365 ~~l~~~~~~~~~~~~vs~~~~~~~~~l~~~ge~~~~p~g~s~---~~~~aP~~~rg~~~g~~~l~~a~g~~~~g~~~~~~ 441 (500)
T PRK09584 365 LVLPLGAKFANDAGIVSVNWLIASYGLQSIGELMISGLGLAM---VAQLVPQRLMGFIMGSWFLTTAGAALIAGYVANLM 441 (500)
T ss_pred HHHHHHHHhcCCCCccCHHHHHHHHHHHHHHHHHHhHHHHHH---HHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 88776544 3456677888899998887665544 66778899999999977655555555555554322
Q ss_pred Hh----------hhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 344 VN----------TIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 344 ~~----------~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
.. ..++.+.|...++..++..++.+...
T Consensus 442 ~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~a~~~~~~~ 479 (500)
T PRK09584 442 AVPDNVTDPLMSLEVYGRVFLQIGIATAVIAVLMLLTA 479 (500)
T ss_pred ccccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 10 12367888777776665554444433
No 93
>KOG2615|consensus
Probab=99.95 E-value=3.4e-26 Score=200.05 Aligned_cols=315 Identities=22% Similarity=0.263 Sum_probs=230.3
Q ss_pred CCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHH
Q psy14075 27 GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMG 106 (414)
Q Consensus 27 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~ 106 (414)
.+..-.|.+.+.+++.+.+.++.+|.++||+|||+++.++.+..++..++.+.++|+..+.++|++.|+..|...+. .+
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl~v~-rA 143 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNLSVI-RA 143 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCchHHH-HH
Confidence 35567799999999999999999999999999999999999999999999999999977777799999999877665 79
Q ss_pred HHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh---hcCChhHH---HHHHHHHHHHHHHHHHhccCCCCCCCC
Q psy14075 107 MLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ---FVGKTAPF---LILSALALGDGLLQLLLLQPGVVKQEV 180 (414)
Q Consensus 107 ~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~---~~gw~~~f---~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (414)
+++|.+++ |+|+++++.+...+++|.++||.+|+++.. ..|--+-+ ++..+..........++.||+-+.+++
T Consensus 144 iisdV~se-k~r~l~ms~v~~a~~lGfilGPmIGgyla~f~~~~g~~p~alP~~~v~i~a~~~v~~~~~~lpETL~~rk~ 222 (451)
T KOG2615|consen 144 IISDVVSE-KYRPLGMSLVGTAFGLGFILGPMIGGYLAQFSSISGSYPFALPCLLVFILAAGDVTFFPWFLPETLPLRKR 222 (451)
T ss_pred HHHhhcCh-hhccceeeeeehhhhcchhhcchhhhHHHhhHhhhccCchHHHHHHHHHHHHHHHHHHHHhCCccccchhh
Confidence 99999995 999999999999999999999999999987 22211111 222222222122223344443222211
Q ss_pred C--Cch-------------hh-----hhccChHH-------HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhH
Q psy14075 181 E--PPT-------------LK-----SLVMDPYI-------LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVS 233 (414)
Q Consensus 181 ~--~~~-------------~~-----~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 233 (414)
+ +.+ .. ...||+.. ....+..+.+...+..+....+.+..+.+|+++.+.|.+
T Consensus 223 ~~~~~~~~~~~~~~~~~~~~~~~~~v~~lrn~p~~~~i~~~~i~~l~~~ly~~l~s~~~~t~~~l~~~rfg~ss~~~G~v 302 (451)
T KOG2615|consen 223 NDEHSTLQEAADDRLALLKFARIFKVAALRNPPLLDFISVLRIFGLHYFLYLELFSGLENTVLFLTHGRFGYSSMQQGKV 302 (451)
T ss_pred cccccchhhhhhhhhhhcchhhhhhhhhhcCccccchHHHHHHHHHHHHHHHHHHHHHHhhHHHhhcCccCCChhhheee
Confidence 1 000 00 12344321 123344455555555565566665567799999999999
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhh--hHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075 234 FLPASISYLIGTNLFGPLGHRMG--RYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311 (414)
Q Consensus 234 ~~~~~~~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 311 (414)
++..++.+.+.+....+..||.+ .+-.+..+..++.-.++++........+.....+..+......+....+ ...
T Consensus 303 l~~tGl~m~~~ql~~~~~l~~~~~~~~a~l~~~l~~~vP~~llls~~~~~~~l~~~s~l~sf~~A~~vt~Lt~L---v~~ 379 (451)
T KOG2615|consen 303 LSTTGLLMLVIQLALVPILPRYKGNIKAVLLFSLLLIVPAFLLLSLARTPVVLYLGSTLKSFSTASVVTCLTSL---VHK 379 (451)
T ss_pred eehhhHHHHHHHHhccccccccccchhhHHHHHHHHHHHHHHHHhccccchhhhHHHHHHHHHHHHhhHHHHHH---HHh
Confidence 99999999998888888888876 5556666666666666677776666666666666666655554333332 446
Q ss_pred cccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075 312 IRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT 346 (414)
Q Consensus 312 ~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~ 346 (414)
..|+++||+++|+..+...++.++||.+.|.+..+
T Consensus 380 ~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~i~~W 414 (451)
T KOG2615|consen 380 YGPQSQRGTLNGIFRSLGALARAIGPLVSGVIFSW 414 (451)
T ss_pred cCCcccchHHHHHHHHHHHHHHHhhhhhhheeEEE
Confidence 67789999999999999999999999999987764
No 94
>PRK10429 melibiose:sodium symporter; Provisional
Probab=99.95 E-value=2.9e-25 Score=213.71 Aligned_cols=330 Identities=13% Similarity=0.094 Sum_probs=238.2
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhc----ccCC-chhHHHHHHHHHHHHHHHHhhhh------HHHHH
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH----RVGY-SLPMFTGFVIMFLSTLIFAFGRT------YGVLF 87 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Gr-r~~l~~~~~~~~~~~~~~~~~~~------~~~l~ 87 (414)
..+.+.+|+++.++|.+..+..+..++..|++|.++| |+|| |+.++++.+..+++..++...++ +..++
T Consensus 31 ~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~llf~~p~~~~~~~~~~~~ 110 (473)
T PRK10429 31 YYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLFLLFSAHLFEGTAQYVFVC 110 (473)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHHHHHcCCCCCccHHHHHHH
Confidence 4456677999999999999999999999999999999 6698 55677788888888766644331 34566
Q ss_pred HHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-------cCChhHHHHHHHHH
Q psy14075 88 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-------VGKTAPFLILSALA 160 (414)
Q Consensus 88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-------~gw~~~f~~~~~~~ 160 (414)
+..++.+++.....++..++..|..++.++|.+..++...+.++|..+.+.+...+.+. .+|+....+.+++.
T Consensus 111 ~~~~l~~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~~g~~~~~~g~~~~~~i~~~~~ 190 (473)
T PRK10429 111 VTYILWGMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNYVGGGDRGFGFQMFTLVLIAFF 190 (473)
T ss_pred HHHHHHHHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 66777888888888888999999995458999999998888888766665554433222 24677777777776
Q ss_pred HHHHHHHHHhccCCCCC-----CCCCCc----hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchh
Q psy14075 161 LGDGLLQLLLLQPGVVK-----QEVEPP----TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQG 231 (414)
Q Consensus 161 ~~~~~~~~~~~~~~~~~-----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 231 (414)
++..+..++..+|++++ +++++. .++.+++||.++......++.+........+.+.|.+...+ ++...+
T Consensus 191 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ll~~~~~~~~~~~~~~~~~~y~~~y~~~-~~~~~~ 269 (473)
T PRK10429 191 IVSTIITLRNVHEVYSSDNQVSAEGSHLTLKDIVALIYKNDQLSCLLGMALAYNIASNIINGFAIYYFTYVIG-DADLFP 269 (473)
T ss_pred HHHHHHHHcCceecCCccccccccccCCCHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhheeeEEEEECC-CHHHHH
Confidence 66666666555554211 111112 23456689988888777777777766666666666655444 455566
Q ss_pred hHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy14075 232 VSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL-----ARNINHLIVPNAGLGFAIGMVDSSMMPEL 306 (414)
Q Consensus 232 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~ 306 (414)
.+.....++.+++.++.+++.||+|+|+.+..+..+..++.+.+.. ..+.+...+..++.+++.+...+...+..
T Consensus 270 ~~~~~~~i~~ii~~~~~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~g~~~~~~~~~~~am~ 349 (473)
T PRK10429 270 YYLSYAGAANLVTLILFPRLVKSLSRRILWAGASIFPVLSCGVLLLMGLAAPHNALLIVIAGILLNIGTALFWVLQVIMV 349 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHhccCchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6777777888999999999999999999988777766655444322 23344555566677788887776666666
Q ss_pred hhhhhcc----cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075 307 GYLVDIR----HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF 349 (414)
Q Consensus 307 ~~~~~~~----~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~ 349 (414)
++..|.. .++..|..+|..+....++..+++.+.|++.+..||
T Consensus 350 ad~id~~e~~tG~R~~G~~~s~~~~~~K~~~al~~~i~g~~l~~~Gy 396 (473)
T PRK10429 350 ADTVDYGEYKLGIRCESIAYSVQTMVVKGGSAFAAFFIGVVLGLIGY 396 (473)
T ss_pred hhhhhhhhHhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 6665532 233447789999999999999999999999987776
No 95
>PTZ00207 hypothetical protein; Provisional
Probab=99.95 E-value=9.9e-25 Score=209.46 Aligned_cols=351 Identities=13% Similarity=0.059 Sum_probs=254.8
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh------hhHHHHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG------RTYGVLFLAR 90 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~------~~~~~l~~~r 90 (414)
..|++++++|.|.++++++.+.. .....++++.|++.||+|||+++.++.+++.+++++++++ ++++.+.+.|
T Consensus 49 ~s~~L~~~lgls~~~l~~i~svg-~~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~l~l~r 127 (591)
T PTZ00207 49 ISGAMQARYNLTQRDLSTITTVG-IAVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVRLSVYN 127 (591)
T ss_pred HHHHHHHHhCcCHHHHHHHHHHH-HHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHHHHHHH
Confidence 45788999999999999998874 4556788899999999999999999999999999999997 6899999999
Q ss_pred HHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHh
Q psy14075 91 SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLL 170 (414)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~ 170 (414)
++.|+|.+...+.....+.+|+| ++||++.|+...+.++|..+.+.+...+.. .+|+..|++.+++.++..++.+.+
T Consensus 128 ~l~G~G~~~~~~~~~~~i~~~Fp--~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv~ll~~~~ 204 (591)
T PTZ00207 128 GLMTLGCMLFDLGAVVTVLSVFP--SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVVGILAIVF 204 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCh--hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999998999999996 689999999999999999865444444433 367888888888777766666555
Q ss_pred ccCCCCCC----C---CC--------------------------------------------------------------
Q psy14075 171 LQPGVVKQ----E---VE-------------------------------------------------------------- 181 (414)
Q Consensus 171 ~~~~~~~~----~---~~-------------------------------------------------------------- 181 (414)
.++++.+. + ++
T Consensus 205 vr~p~~~~~~~~~~~~~~~~~~~~~~~~~~y~~q~~p~~~f~~~~~i~~~l~~yl~~~~~~~~~~~~~~~~~~~~~~v~~ 284 (591)
T PTZ00207 205 MRLPPFHLTGYQEKHLDEEEKAQRLMRKGVYLKQKAPMWRFVYGFVILIILIVFLPLQGALVAYLKLGSNFKVGFAVTVI 284 (591)
T ss_pred eeCCcchhhcccccCCCHHHHHHHhhhhhhhhhcCCCceehhhHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHH
Confidence 43322100 0 00
Q ss_pred ----------------------------------------------------------CchhhhhccChHHHHHHHHHHH
Q psy14075 182 ----------------------------------------------------------PPTLKSLVMDPYILIAAGAITF 203 (414)
Q Consensus 182 ----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~ 203 (414)
..++++.+++..+|++.+..++
T Consensus 285 ~lll~~p~l~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~t~~q~l~~~d~Wll~~~~~c 364 (591)
T PTZ00207 285 VLTVIFPFMAFPLTTFDGKRPHDDSDGKAKEHVEAGEEVSAAEDKVVETDVDYIAPQFQETFIEGLKTARLWCLLWSIFC 364 (591)
T ss_pred HHHHHHHHHhhhHHHhccCCcCCCccccccccccccccccccccccccccccCCCCCCcchHHHHHhchhHHHHHHHHHH
Confidence 0011222334567777777777
Q ss_pred HHHHHHhhhhchHHHHHHHhCCCccc--hhhHhHHHHHHHHhhhhhhhhhhhhhhhH---------HHHHHHHHHHHHHH
Q psy14075 204 ANTGIAMLEPSLPIWMMDTMGADKWQ--QGVSFLPASISYLIGTNLFGPLGHRMGRY---------LAALLGLLIIGICL 272 (414)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~g~~~~~--~g~~~~~~~~~~~~~~~~~g~l~d~~~~~---------~~~~~~~~~~~i~~ 272 (414)
...........+.+..+..-|.+... ...+.++.++.+.+|++..|.+.....+| ..+.+..+ +.++.
T Consensus 365 g~g~gl~~~~N~~qI~~sl~g~~~~~~~~~~~vsL~si~~~~GRl~~g~~~~~~~~~~~~~r~prt~~l~~~~~-~~~~~ 443 (591)
T PTZ00207 365 CVGAHFVIIFNARFIYTALAGEAPDDALNTLLTVLNGVGSAVGRLCMSYFEIWSQKRRAEDRVPITIALFIPSV-CIITM 443 (591)
T ss_pred hhCchheeeecHHHHHHHhcCCCCCccceeeehhhhhHHHHhhHHHHHHHHHHHHhhccccccchhHHHHHHHH-HHHHH
Confidence 77666666677777666632663322 33378899999999999999987322222 22333344 55555
Q ss_pred HHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHH-HHHHHHHHhhh----
Q psy14075 273 MMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIG-PAMSGTLVNTI---- 347 (414)
Q Consensus 273 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig-~~~~g~l~~~~---- 347 (414)
+++.+......+++..++.|+++|..++...+. ..|.+. +..|+-+-+.....-+|..+- -.++|.++|.-
T Consensus 444 lll~~~~p~~~L~~~~~lvg~~~G~~~~~~~~i---~selFg-k~~g~~yN~~~~a~pigs~~~n~~l~G~~Yd~ea~k~ 519 (591)
T PTZ00207 444 LTLFLTLPKAALPLPYFIAAFANGFMAATIALV---TRTIFA-KDPAKHYNFCFLGSVLSAIFLNRLLYGEWYTQQADKL 519 (591)
T ss_pred HHHHHHCCccHhHHHHHHHHHHhhHhHHHHHHH---HHHHhc-cchHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 555544332567888999999999997766655 567777 666888887777666776655 56778888752
Q ss_pred ------c---hHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075 348 ------G---FEWMLFIIAILDFMYAPLLYLLRNPPTK 376 (414)
Q Consensus 348 ------g---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (414)
| ++..|.+.+++++.+.+....+..+.++
T Consensus 520 ~~~~C~G~~C~~~~~~v~~~~~~~g~~~s~~l~~R~r~ 557 (591)
T PTZ00207 520 GQDVCTERVCVVMPLAFLLGLSFLAFITSTYVHLQYRR 557 (591)
T ss_pred CCCeeCCceeeHhHHHHHHHHHHHHHHHHhheeeehHH
Confidence 2 6789999999999988887766554443
No 96
>PRK09848 glucuronide transporter; Provisional
Probab=99.95 E-value=9.4e-25 Score=209.24 Aligned_cols=331 Identities=13% Similarity=0.092 Sum_probs=228.8
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhccc----CCchhH-HHHHHHHHHHHHHH-Hhh----h--hHHHH
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV----GYSLPM-FTGFVIMFLSTLIF-AFG----R--TYGVL 86 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~----Grr~~l-~~~~~~~~~~~~~~-~~~----~--~~~~l 86 (414)
+.+.+.+|+++.++|.+.+...+..++..|+.|+++||. ||||.. .++.+...+...+. ... + ..+..
T Consensus 33 ~y~~~~~gl~~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~~~~~Gr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (448)
T PRK09848 33 SYYTDVAGVGAAAAGTMLLLVRVFDAFADVFAGRVVDSVNTRWGKFRPFLLFGTAPLMIFSVLVFWVPTDWSHSSKVVYA 112 (448)
T ss_pred HHHHHHcCCCHHHHHHHHHHHHHHHHHhhhhheeeeecCCCCCcCchHHHHHHHHHHHHHHHHHHhCcCCCCcchHHHHH
Confidence 456677899999999999999999999999999999996 777654 55655555444443 221 1 22334
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHh-----hhhhhchhhhhHhhhhc--CChhHHHHHHHH
Q psy14075 87 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLA-----LGVLIGPPFGGIMYQFV--GKTAPFLILSAL 159 (414)
Q Consensus 87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~-----~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~ 159 (414)
++..++.+++.+...++..++..+..++.++|.+..+....+.+ ++..++|.++....... +|.....+.+++
T Consensus 113 ~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~r~~~~~~r~~~~~~~~~~~~~~~~p~i~~~~g~~~~~~~~~~~~~~~v~ 192 (448)
T PRK09848 113 YLTYMGLGLCYSLVNIPYGSLATAMTQQPQSRARLGAARGIAASLTFVCLAFLIGPSIKNSSPEEMVSVYHFWTIVLAIA 192 (448)
T ss_pred HHHHHHHHHHHHHhcccHhhhhhhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHH
Confidence 55567788888888888888888777655789888777665433 44555555554321110 121111233333
Q ss_pred HHHHHHHHHHhccCCCCCCCCC---CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHH
Q psy14075 160 ALGDGLLQLLLLQPGVVKQEVE---PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLP 236 (414)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~ 236 (414)
.++..+......+|+.++++++ ...+++++|||.++...+..++....+.......|.|+++.+|.++...++....
T Consensus 193 ~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~l~~n~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 272 (448)
T PRK09848 193 GMVLYFICFKSTRENVVRIVAQPSLKISLQTLKRNRPLFMLCIGALCVLISTFAVSASSLFYVRYVLNDTGLFTVLVLVQ 272 (448)
T ss_pred HHHHHHHHHcCcEeccCCCccCCCHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHhhhheeeEeeecCChHHHHHHHHHH
Confidence 3333333343344443222222 1235678999999988888888888777877788888888888877655555555
Q ss_pred HHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-
Q psy14075 237 ASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR- 313 (414)
Q Consensus 237 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~- 313 (414)
..++.+++.++.+++.||+++|+.+..+.++..++.+.+.+.+ +.+......++.+++.+...+...+...+..|..
T Consensus 273 ~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~~~~~al~~~~~~~~~ 352 (448)
T PRK09848 273 NLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTMTVMWALEADTVEYGE 352 (448)
T ss_pred HHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhH
Confidence 5677888899999999999999999999888888776666543 3444455567778888888776666655554422
Q ss_pred ---cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075 314 ---HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF 349 (414)
Q Consensus 314 ---~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~ 349 (414)
+++..|..+|+.+....+|..+++.+.|.+.+..||
T Consensus 353 ~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 353 YLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 234569999999999999999999999999887665
No 97
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.94 E-value=4.2e-24 Score=198.81 Aligned_cols=349 Identities=16% Similarity=0.197 Sum_probs=260.9
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccC-CchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-YSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-rr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
.|.+-++.|.|..|+|.+.+...+...++++++|.++||++ +||.+.+..++.++........++++.+++.-++..+.
T Consensus 25 ~~~~L~~~G~s~~qIG~l~a~~~~~~i~~~~~~g~~aDr~~~~~~~l~~~~l~~~~~~~~~~~~~~f~~~~~~~~l~~~~ 104 (400)
T PF03825_consen 25 LPLYLESRGFSGTQIGILLAVGPLARIVSPPFWGAIADRFGSAKRILALLSLLSALALLLLAFSSSFWWLFVIMLLFSFF 104 (400)
T ss_pred HHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHH
Confidence 46677889999999999999999999999999999999986 57888888888888777778888999998888888888
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhh-hhHhhhhcCC---hhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF-GGIMYQFVGK---TAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l-~~~l~~~~gw---~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
.....|...++.-+.. +++++-.|......++|.+++... ++.+....++ ...+++.+...++.....+..++
T Consensus 105 ~~p~~pl~dsi~~~~~---~~~~~~YG~iRlwGSiGf~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ll~~~~l~lp~ 181 (400)
T PF03825_consen 105 FSPTMPLSDSIALSYL---GDRGKDYGRIRLWGSIGFIVAALAFGGLLGGYLGISGTSLIFYIAAILSLLLAGFALFLPK 181 (400)
T ss_pred HccHHHHHHHHHHHHc---ccccCCCCcchhhhhHHHHHHHHHHHHHHHhhhccccccHHHHHHHHHHHHHHHHHHhCCC
Confidence 8888888888888876 346677788888888888877654 2333333333 34566666555444443343333
Q ss_pred CCCCCC-CC--C---CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhh
Q psy14075 173 PGVVKQ-EV--E---PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTN 246 (414)
Q Consensus 173 ~~~~~~-~~--~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~ 246 (414)
.+++++ ++ + ..+..+++|+|++....+..++..........+.+.|+++..|.+....+...++..++.++.-.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~llk~~~~~~Fll~~~l~~~~~~~~~~f~~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~ 261 (400)
T PF03825_consen 182 TPPKRSAKESVKKLLGLDALKLLKNPRFLVFLLAAFLIGISHAAYYTFFSIYLQELGGYSGSTIGILWALGVVAEIPFFF 261 (400)
T ss_pred CccccccCCCcccccchHHHHHhcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHHHHHHHH
Confidence 221111 11 1 12334789999999888888888888888999999999986447777888888888899999999
Q ss_pred hhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh-hhhHHHHHHH----HHHHHHHHhhhhhhhhhhhhhhhcccccchhhH
Q psy14075 247 LFGPLGHRMGRYLAALLGLLIIGICLMMIPLA-RNINHLIVPN----AGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV 321 (414)
Q Consensus 247 ~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~-~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 321 (414)
..+++.+|+|.++++.++.+..++=..++... ++.+...... .+-|+.++... .+...++.+..|++.|+++
T Consensus 262 ~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~lhG~tf~~~~---~a~~~yi~~~~p~~~~at~ 338 (400)
T PF03825_consen 262 FSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLLHGLTFGLFH---AASVRYIDRIAPPELRATA 338 (400)
T ss_pred HHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhhhhHHHHHHH---HHHHHHHHHhCCccchHHH
Confidence 99999999999999999999999888887776 4433333333 34677777663 3444567788999999999
Q ss_pred HhHHHHH-HHHHHhHHHHHHHHHHhhhchHH------HHHHHHHHHHHHHHHHHHhcC
Q psy14075 322 YAIGDVA-FCLGFAIGPAMSGTLVNTIGFEW------MLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 322 ~g~~~~~-~~~g~~ig~~~~g~l~~~~g~~~------~~~~~~~~~~~~~~~~~~~~~ 372 (414)
.++++.. ..+|..+|..++|+++|++|.+. .+.+.+++.++..++..++.|
T Consensus 339 Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~~f~~~fk 396 (400)
T PF03825_consen 339 QGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILVLFVILFK 396 (400)
T ss_pred HHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 9998765 57999999999999999988554 344444444444444444433
No 98
>KOG0254|consensus
Probab=99.94 E-value=1.2e-24 Score=211.26 Aligned_cols=342 Identities=15% Similarity=0.119 Sum_probs=246.1
Q ss_pred chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHh
Q psy14075 30 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLA 109 (414)
Q Consensus 30 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~ 109 (414)
++.+++.+...++..+++++.|+++|++|||+.++++.+++.++.+++++++|+++++++|+++|+|.|........+++
T Consensus 89 ~~~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~piy~s 168 (513)
T KOG0254|consen 89 VRQGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAPVYIS 168 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcchhhHh
Confidence 45699999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-cCChhHHHHHHHHHHHHHHHHHHhccCCCCCC----------
Q psy14075 110 ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGLLQLLLLQPGVVKQ---------- 178 (414)
Q Consensus 110 ~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---------- 178 (414)
|..|+ +.||...+..+....+|..++..++....+. .+||..+.+..+.+++..+. .++.||+++..
T Consensus 169 Eiap~-~~RG~l~~~~~l~~~~Gi~~~~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~-~~~~pesp~~L~~~g~~~~a~ 246 (513)
T KOG0254|consen 169 EIAPA-HIRGTLVSLYQLFITIGILLGYCINYGTSKVYAGWRIPLGLALIPAVILALG-MLFLPESPRWLIEKGRLEEAK 246 (513)
T ss_pred hcCCh-hhhHHHHHHHHHHHHHHHHHHHHHhhhhccCCccHHHHHHHHHHHHHHHHHH-HHhCCCChHHHHHcCChHHHH
Confidence 99994 9999999999999999999995555444332 48999999999998888777 66665544210
Q ss_pred ----------CCCC--------------------c-hhhhhcc----ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHh
Q psy14075 179 ----------EVEP--------------------P-TLKSLVM----DPYILIAAGAITFANTGIAMLEPSLPIWMMDTM 223 (414)
Q Consensus 179 ----------~~~~--------------------~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (414)
+.+. + .++++++ ++.++...+..+.+..+.+....|.+.+++..
T Consensus 247 ~~l~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~~~l~~fqq~tG~~~~~~Y~~~if~~~- 325 (513)
T KOG0254|consen 247 RSLKRLRGLSPEDVEVELELLKIKLLVEAEVAEGKASWGELFSPKVRKRLIIGLLLQLFQQLTGINYVFYYSTTIFKSA- 325 (513)
T ss_pred HHHHHHhCCCCcchHHHHHHHHHHHHHhhhcccccccHHHhcCcchHHHHHHHHHHHHHHHHhCCceEEeehHHHHHhc-
Confidence 0000 0 0112222 12233445555555666777888888887764
Q ss_pred CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh------------hHHHHHHHHHH
Q psy14075 224 GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARN------------INHLIVPNAGL 291 (414)
Q Consensus 224 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~------------~~~~~~~~~~~ 291 (414)
|.+... .......++...++..+...+.||+|||+.++.+...+.++.+++..... .+..+...+++
T Consensus 326 g~~~~~-~~~~~~~~~v~~~~t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 404 (513)
T KOG0254|consen 326 GLKSDT-FLASIILGVVNFLGTLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLF 404 (513)
T ss_pred CCCCch-HHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHH
Confidence 655433 45555667788888888899999999999999999999998887764321 11122222222
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH--HHHH
Q psy14075 292 GFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP--LLYL 369 (414)
Q Consensus 292 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~--~~~~ 369 (414)
-..+.......+. ....|.+|.+.|+++.++......+...+-......+.+..+....|...+..+.+... ....
T Consensus 405 v~~f~~g~g~v~w--~~~sEifp~~~r~~~~s~~~~~n~~~~~~v~~~~~~~~~~~~~~~~f~~f~~~~~~~~~~fv~~~ 482 (513)
T KOG0254|consen 405 IFSFAIGWGPVPW--VIVSEIFPLRLRSKGASLAVAVNWLWNFLISFFFPFITEALGIGGTFGYFGGICLLSLIIFVFFF 482 (513)
T ss_pred HHHHhcccccchh--hhhhccCcHhHHhhhHHHHHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHHheEE
Confidence 2233222222221 24679999999999999999988888877777666666655433444444444444444 3344
Q ss_pred hcCCCchh
Q psy14075 370 LRNPPTKE 377 (414)
Q Consensus 370 ~~~~~~~~ 377 (414)
.++.+.+.
T Consensus 483 ~pETkg~s 490 (513)
T KOG0254|consen 483 VPETKGLT 490 (513)
T ss_pred cccCCCCc
Confidence 45444443
No 99
>KOG0252|consensus
Probab=99.94 E-value=9.8e-27 Score=208.18 Aligned_cols=352 Identities=15% Similarity=0.102 Sum_probs=258.2
Q ss_pred CCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh-------hHHHHHHHHHHHhhhhhh
Q psy14075 27 GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR-------TYGVLFLARSLQGIGSSC 99 (414)
Q Consensus 27 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~-------~~~~l~~~r~l~G~~~~~ 99 (414)
.++...+.+..+..+|..++|++.|++.||+|||+++...+++..+++++++++. -.+++...|++.|+|.|+
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 3455678899999999999999999999999999999999999999999888753 257889999999999999
Q ss_pred hhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc---------------CChhHHHHHHHHHHHHH
Q psy14075 100 SSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV---------------GKTAPFLILSALALGDG 164 (414)
Q Consensus 100 ~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~---------------gw~~~f~~~~~~~~~~~ 164 (414)
-+|.+.+..+|... +++||...+.+.+..++|.+.|.+++-.+..-+ -||..|.+.++.++...
T Consensus 161 DYPlSAtI~SE~an-~~~RGa~iaavFa~Qg~GilaG~ivt~Iv~~~fe~~~~~~~~~~~ld~vWRl~~glg~vpa~~~l 239 (538)
T KOG0252|consen 161 DYPLSATIMSESAN-KKTRGAFIAAVFAMQGFGILAGGIVALIVSAIFEKIFNGPSTYPHLDGVWRIIFGLGAVPALLVL 239 (538)
T ss_pred CCcchHHHhhhhhh-hccccceeEEEEEecchhHhhccHHHHHHHHHHhccCCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998 699999999999999999888888776554211 29999999888887766
Q ss_pred HHHHHhccCCCCC-----C--------CCC-C-----------------ch---hhhhccC---hHHHHHHHHHHHHHHH
Q psy14075 165 LLQLLLLQPGVVK-----Q--------EVE-P-----------------PT---LKSLVMD---PYILIAAGAITFANTG 207 (414)
Q Consensus 165 ~~~~~~~~~~~~~-----~--------~~~-~-----------------~~---~~~~~~~---~~~~~~~~~~~~~~~~ 207 (414)
...+..++.++.+ + +++ + .+ +.+.+.. +++.-.+..+++.-.+
T Consensus 240 y~Rl~M~Et~~Y~al~~~~~~~a~~d~~k~~~~~~~~~~~~~~~~~~~~~~~~~F~~~f~~~hg~~Llgt~~~WFllDia 319 (538)
T KOG0252|consen 240 YFRLKMPETARYTALVSKKLKQAAGDMKKVLSVDIEAESTAESDVPPPSNSFGLFSRLFLRWHGKHLLGTAGTWFLLDIA 319 (538)
T ss_pred HhhhcCCcchhHHHHhhcCHhhhhhccccccccccchhhccccCCCCcccccchHHHHHHHHHHHHHHHHHHHHHhhhhh
Confidence 6666554432211 0 000 0 00 1111111 3444556677777778
Q ss_pred HHhhhhchHHHHHHHhCCCccchhh--------HhH-HHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q psy14075 208 IAMLEPSLPIWMMDTMGADKWQQGV--------SFL-PASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA 278 (414)
Q Consensus 208 ~~~~~~~~~~~~~~~~g~~~~~~g~--------~~~-~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~ 278 (414)
++....+....++. .|..+.+... ... +...+.+.|..+...++|++|||+..+.+++++.+..+.+...
T Consensus 320 fy~~nL~~s~I~~~-ig~~~~~~~~~~~~~vA~~~~iia~~~~vPGyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~~ 398 (538)
T KOG0252|consen 320 FYGQNLFQSVIFSA-IGVIPSANTYHELFKVAEGNLIIAVCSTVPGYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAGP 398 (538)
T ss_pred hhccccHHHHHHHh-hccCCCcchHHHHHHHHHHHHHHHHHccCCceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcCC
Confidence 88887787777765 5666555443 111 1222333466677788999999999999999999988888776
Q ss_pred hh-hHHHHHHHHHHHHHHHh-hhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-----hhchHH
Q psy14075 279 RN-INHLIVPNAGLGFAIGM-VDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-----TIGFEW 351 (414)
Q Consensus 279 ~~-~~~~~~~~~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-----~~g~~~ 351 (414)
.+ ........+++++...+ .+....+......|.+|.+.|+++.|+....+..|+.++...+.++.+ ..|.++
T Consensus 399 y~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FParvR~t~hGIsAA~GK~GAivg~~~F~~~t~~~yp~~~g~~~ 478 (538)
T KOG0252|consen 399 YNQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPARVRSTCHGISAASGKAGAIVGAFGFLYLTDHNYPPNIGVRN 478 (538)
T ss_pred cccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHHHhhhhhhHHHHhccchHHHHHHHhhHhhhccCCccccchH
Confidence 44 11111112222221111 112233333457799999999999999999999999999999999999 788999
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCchhhhh
Q psy14075 352 MLFIIAILDFMYAPLLYLLRNPPTKEEKK 380 (414)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (414)
++++.+.+..++.+..+++++.+.+..++
T Consensus 479 v~~i~~~~~~~gi~~T~l~pEtk~~~lee 507 (538)
T KOG0252|consen 479 VFIILAGCMLLGILFTLLIPETKGKSLEE 507 (538)
T ss_pred HHHHHHHHHHHhHheeEEeecccccCHHH
Confidence 99999999999999988888655544433
No 100
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.94 E-value=1.8e-24 Score=197.44 Aligned_cols=349 Identities=17% Similarity=0.203 Sum_probs=255.3
Q ss_pred hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHH---HHHHHHHhh----hhHH-HHHHHHHH
Q psy14075 21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMF---LSTLIFAFG----RTYG-VLFLARSL 92 (414)
Q Consensus 21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~---~~~~~~~~~----~~~~-~l~~~r~l 92 (414)
+.++.|+|.+|+|.+.++..+...+.+|+.|.++||+|.||-++....+.. .......+. .|.+ ..+++-+.
T Consensus 34 L~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l~~l~~pff~~v~~pll~~n~~lg~iig~i~ 113 (412)
T PF01306_consen 34 LTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAILLLLFGPFFIYVFGPLLQSNFWLGAIIGGIY 113 (412)
T ss_dssp HHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHHHHTCHHHHHHTHHHHHHTT-HHHHHHTTTT
T ss_pred HccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345689999999999999999999999999999999997776554333222 222222222 2322 22333344
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
.|+......|..-+++.++. ++.+.-.|-..+..++|.+++..++|.+.+ .+-+..||+....+++..++.++.++
T Consensus 114 l~~~f~~~~~~~Ea~~er~s---r~~~feYG~~R~wGSig~ai~s~~~G~L~~-i~p~~~fwi~s~~~~il~lll~~~~~ 189 (412)
T PF01306_consen 114 LGLVFNAGVPLSEAYAERVS---RRNGFEYGRARMWGSIGFAIASLLAGILFN-INPNIIFWIASAAAIILLLLLLLLKP 189 (412)
T ss_dssp TTTTTTTHHHHHHHHHHHHH---HHHSS-HHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHSS--
T ss_pred HHHHHcccchHHHHHHHHHH---HHhcCCcchHHHHhhHHHHHHHHHhheeee-eCccHHHHHHHHHHHHHHHHHHHcCC
Confidence 45555566677777776653 567788899999999999999999999987 46678888877776666665555554
Q ss_pred CCCCCC--------CCCC---chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhC---CCccchhhHhHHHH
Q psy14075 173 PGVVKQ--------EVEP---PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMG---ADKWQQGVSFLPAS 238 (414)
Q Consensus 173 ~~~~~~--------~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~g~~~~~~~ 238 (414)
+.+++. ++++ ++..+++|+|++|.+.+........+..+....|.|..+.++ .+....|++.+..-
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~k~~~fw~~~l~v~g~~~~Y~vfdqqf~~y~~~~f~~~~~g~~~~G~l~s~~v 269 (412)
T PF01306_consen 190 DVPPQAEVADALGAKKDKVSLKDVLSLFKMRNFWFFVLFVIGVAAIYDVFDQQFPIYFASFFQSAGQGNQMYGYLWSVQV 269 (412)
T ss_dssp -SSSSS-SSTTSSS------HHHHHHHTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSHHHHHHHHHHHHHHHH
T ss_pred cCchhhhhhcccccCCCCCcHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccChhHHhHHHHHHH
Confidence 322210 1111 134578899999998888877777888888778888876433 33456788888888
Q ss_pred HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch
Q psy14075 239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY 318 (414)
Q Consensus 239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 318 (414)
+..++.-.+.+++.+|+|.|+.++++..++.+=.+..++.++.+.+...-.+-++-.... ..+...++.+.+|++..
T Consensus 270 ~~E~~~m~~~p~li~rig~k~~Lllag~i~~iRi~~~~~~~~~~~i~~~klLH~~e~~l~---lva~fkYI~~~fd~rls 346 (412)
T PF01306_consen 270 FLEALMMFFSPWLINRIGAKNLLLLAGVIMAIRIIGSGFATNPWVISLIKLLHALEFPLL---LVAAFKYITAHFDKRLS 346 (412)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHT--SHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHS-GGGH
T ss_pred HHHHHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHHhhhcchHHHHHHHHHHHHHHHHH---HHHHHHHHHHhCCHhHH
Confidence 999999999999999999999999999999999999999999988888888888887776 45666788899999988
Q ss_pred hhHHhHH-HHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075 319 GSVYAIG-DVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK 376 (414)
Q Consensus 319 g~~~g~~-~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (414)
++.+.+. +...++|..+.+.+.|.++|+.|++.+|.+++.+.+...++..+..+++++
T Consensus 347 At~y~v~~~~~~~~~~~i~s~~~G~lyd~~G~~~tylimg~iv~~~~li~~f~l~~~~~ 405 (412)
T PF01306_consen 347 ATLYLVGFQFAKQIGIIILSPLAGYLYDRIGFQHTYLIMGLIVLPFTLISAFTLKKDKK 405 (412)
T ss_dssp HHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS--SSS
T ss_pred HHHHHHHHHHHHHHHHHHHhhhHHhhHhhcCcHHHHHHHHHHHHHHHHHheeeecCCCc
Confidence 8888884 688899999999999999999999999999988888777777666554433
No 101
>PF13347 MFS_2: MFS/sugar transport protein
Probab=99.94 E-value=6.1e-25 Score=209.18 Aligned_cols=331 Identities=18% Similarity=0.250 Sum_probs=273.9
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhc----ccCCchh-HHHHHHHHHHHHHHHHhh-h-------hHH
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH----RVGYSLP-MFTGFVIMFLSTLIFAFG-R-------TYG 84 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~-l~~~~~~~~~~~~~~~~~-~-------~~~ 84 (414)
.+.+.+.+|+++..+|.+..+..+..++..|+.|.++| |+||||. ++++.+..+++..++... + ...
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf~~~p~~~~~~~~~~ 104 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLFSPPPAGLSFTAKLV 104 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhhccccchhhhhhHHH
Confidence 45667788999999999999999999999999999999 8997666 667888888888888766 4 233
Q ss_pred HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-------CChhHHHHHH
Q psy14075 85 VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-------GKTAPFLILS 157 (414)
Q Consensus 85 ~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------gw~~~f~~~~ 157 (414)
.+.+..++..++......+..++.+|..++.++|.+..+..+.+..+|..+...+.+.+.+.+ +|++..++.+
T Consensus 105 ~~~~~~~l~~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~g~~~~~~~~~~~~~v~~ 184 (428)
T PF13347_consen 105 WLFVFYILFDIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWFGGGDTSNGYRWMALVLA 184 (428)
T ss_pred HHHHHHHHHHHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhhccCccchHHHHHHHHHH
Confidence 457777777999999999999999999986579999999999999999876666666655432 5999999999
Q ss_pred HHHHHHHHHHHHhccCCCC--CCCCC----CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchh
Q psy14075 158 ALALGDGLLQLLLLQPGVV--KQEVE----PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQG 231 (414)
Q Consensus 158 ~~~~~~~~~~~~~~~~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g 231 (414)
++.++..++..+..+|+++ +++++ .+.+++++|||.++......++............+.|.++..|.+ ...+
T Consensus 185 iv~~v~~~i~~~~~ke~~~~~~~~~~~~~~~~~~~~~~~nr~~~~l~~~~~~~~~~~~~~~~~~~y~~~~vl~~~-~~~~ 263 (428)
T PF13347_consen 185 IVGLVFFLITFFFVKERSVEVTEQEKKISLRDSLRSLFRNRPFRILLLAFFLQWLAFALMNTFLPYYFTYVLGNE-GLIS 263 (428)
T ss_pred HHHHHHhhhhhheeeeccccccccccccccccchhhhcccchHHHHHHHHHHHHhhhhhhhhHHHHHHHHHhcCc-hhhH
Confidence 9998888888887777211 11111 235678889999999988898888888888888999999988877 4667
Q ss_pred hHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy14075 232 VSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYL 309 (414)
Q Consensus 232 ~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 309 (414)
.+.....++.+++.++.++++||+|+|+.+..+..+.+++.+.+.+.+ +.+...+..++.|++.+.......+..++.
T Consensus 264 ~~~~~~~~~~~v~~~~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~ 343 (428)
T PF13347_consen 264 IFMLIFFVASIVGSPLWGRLSKRFGKKKVYIIGLLLAALGFLLLFFLGPGSPWLVLILFILAGIGYGAFFVIPWAMLADV 343 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccceeehhhhHHHHHHHHHHHHHHHhhhHHHHHHHHHHhHhhhcccccccccccccc
Confidence 777888899999999999999999999999999999999888887775 778888889999999999888777777766
Q ss_pred hhcc----cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075 310 VDIR----HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF 349 (414)
Q Consensus 310 ~~~~----~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~ 349 (414)
.|.. .++..|..+|+.+....++..+++.+.|.+.+..||
T Consensus 344 id~~e~~tg~r~~g~~~s~~~~~~k~~~~la~~i~g~~l~~~Gy 387 (428)
T PF13347_consen 344 IDYDEWKTGRRREGMYFSVNSFFIKIGQGLAGAIVGLLLALVGY 387 (428)
T ss_pred hhhHHHhcCCCchHHHHHhhhhhhHHHHHHHHHHHHHHHHHhCc
Confidence 6543 234559999999999999999999999999887665
No 102
>KOG0255|consensus
Probab=99.94 E-value=6.5e-24 Score=207.31 Aligned_cols=342 Identities=18% Similarity=0.168 Sum_probs=243.2
Q ss_pred hhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q psy14075 23 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV 102 (414)
Q Consensus 23 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 102 (414)
+.+..+.....+..+++.+|..++.+++|.++||+|||++++++.++..++.++.++++|++.+++.|+++|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 45666788889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCC-----
Q psy14075 103 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVK----- 177 (414)
Q Consensus 103 ~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~----- 177 (414)
....++.|++++ ++|+.+..+ ......++.++++.++++.+ +||+.+++..++..+..+. +++.+|.++-
T Consensus 191 ~~~~~~~E~~~~-~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~-~~l~~Es~rwl~~~g 265 (521)
T KOG0255|consen 191 VGFGLVAEIVSP-KQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLL-WFLPPESPRWLLSKG 265 (521)
T ss_pred HhHhhheeecCc-chhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHH-HHccCcChHHHHHcC
Confidence 999999999996 999999999 88888888888988888887 8999999999998887666 4444333210
Q ss_pred -----------------CCCC---------------------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHH
Q psy14075 178 -----------------QEVE---------------------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWM 219 (414)
Q Consensus 178 -----------------~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (414)
.+.+ +..+.++++.|++....+...+.++.+.....-++...
T Consensus 266 ~~~~a~~~l~~~a~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~y~gl~~~~ 345 (521)
T KOG0255|consen 266 RIDEAIKILKKIAKLNGRKLSVKELLRLELLLRPLKLLFTEPKISFLDLFRTPRLRYRTLYLLFIWFVFSLVYYGLSLNV 345 (521)
T ss_pred chHHHHHHHHHHHhhcCCCCCcHHHHHHHHHhhHhhhhccCCCCchhhhhcCHHHHHHHHHHHHHHHHHhHHHHhhhhhh
Confidence 0000 01133455555444433333333333333222233322
Q ss_pred HHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHH---HHHHHHHHHHHHH
Q psy14075 220 MDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINH---LIVPNAGLGFAIG 296 (414)
Q Consensus 220 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~g~~~~ 296 (414)
.. +|.+ ........+.....+....+...|+.|||.....+..+..++++...+...... ......+..++.+
T Consensus 346 ~~-lg~~---~~~~~~~~~~~~~p~~~~~~~~~~~~gR~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 421 (521)
T KOG0255|consen 346 SG-LGGN---IYLNFTLSGLVELPAYFRNGLLLPEFGRRPPLFLSLFLAGIGLLLFGWLPDDLGGWLHWILPLLGKFFIG 421 (521)
T ss_pred hh-cCch---HHHHHHHHHHHHhhHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHhhccchhHHHHHHHHHHHHHHH
Confidence 22 3333 333444445567777777789999999999999999999999888887654332 2233333333333
Q ss_pred hhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH-HHhcCCCc
Q psy14075 297 MVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLL-YLLRNPPT 375 (414)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 375 (414)
.. ......+..|..|...|..+.+.......+|.+++|.+.-.... ......+...+....+...+. .++++.+.
T Consensus 422 ~~---~~~~~~~~~el~pt~~r~~~~~~~~~~~~~~~i~ap~~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~~lpet~~ 497 (521)
T KOG0255|consen 422 SA---FNLIFLYSAELIPTVVRNTAVGAISAAARLGSILAPLFPLLLRQ-MFPLLGLILFGWLALLLGLLSLLLLPETKG 497 (521)
T ss_pred HH---HHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh-hcccchHHHHHHHHHHHHHHHHhcCcccCC
Confidence 33 33334567899999999999999999999999999998755444 222222222344444444444 55555544
Q ss_pred hh
Q psy14075 376 KE 377 (414)
Q Consensus 376 ~~ 377 (414)
+.
T Consensus 498 ~~ 499 (521)
T KOG0255|consen 498 KP 499 (521)
T ss_pred CC
Confidence 43
No 103
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=99.94 E-value=1.1e-24 Score=208.34 Aligned_cols=341 Identities=13% Similarity=0.027 Sum_probs=245.1
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccC-----CchhHHHHHHHH-HHHHHHHHhhhhHHHHH-HH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-----YSLPMFTGFVIM-FLSTLIFAFGRTYGVLF-LA 89 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~~-~~~~~~~~~~~~~~~l~-~~ 89 (414)
..|.+.+++|+|+++++...+...+...+-. ++|.++||++ ||+.++++.++. .+.....+..++..... +.
T Consensus 48 ~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l~g~l~D~~~i~G~rRr~~l~~~~~l~~~~~~~~l~~~~~~~~~~~~~ 126 (468)
T TIGR00788 48 LSPMLTDDLGLDGARYQRLVGLSSLGWALKP-FAGVMSDTFPLFGYTKRWYLVLSGLLGSAILYGLLPGKVSSAKVAAAF 126 (468)
T ss_pred hhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCccchHHHHHHHHHHHHHHHHhcccccchHHHHHHH
Confidence 3466677899999999999999999999955 5999999997 777778877776 34444444445544444 47
Q ss_pred HHHHhhhhhhhhhhHHHHHhhcCCCcchhhH---HHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHH
Q psy14075 90 RSLQGIGSSCSSVSGMGMLAERYPDDRERGN---AMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLL 166 (414)
Q Consensus 90 r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~---~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~ 166 (414)
.++.+++.+...++..++..|..+ +++.. ..+......++|.++++.++|.+.+.++||..|++.+.+.++..+.
T Consensus 127 ~~l~~~~~a~~dv~~da~~~e~~~--~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~~~~~~~~~f~~~a~l~ll~~~~ 204 (468)
T TIGR00788 127 IFLAALAKALYDVLVDSLYSERIR--ESPSAGPSLVSWMWGASATGGLISSLLGGPLLDKTLTRILFLITAALLLLQLFV 204 (468)
T ss_pred HHHHHHHHHHHHHhHHHHHhhhhh--cCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHHHhcCcchHHHHHHHHHHHHHHH
Confidence 889999999999999999999986 33333 3334444456899999999999999999999999999888877444
Q ss_pred HHHhccCCC---CCCCCC--------------------CchhhhhccChHHHHHHHHHHH-HHHHHHhhhhchHHHHHHH
Q psy14075 167 QLLLLQPGV---VKQEVE--------------------PPTLKSLVMDPYILIAAGAITF-ANTGIAMLEPSLPIWMMDT 222 (414)
Q Consensus 167 ~~~~~~~~~---~~~~~~--------------------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 222 (414)
..+. +|++ .++..+ ..+.++.+++|.++...+..++ ..........+. .+.++.
T Consensus 205 ~~~~-~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~i~~~l~fifl~~~~~~~~~~~~f-~~~~~~ 282 (468)
T TIGR00788 205 SNLS-KERRAFVRPRIGTYLEMNMALLTLGVLANVKVQILGLRGAIQLLEIAKPLIFIFLSYANLPGASGSVF-CATTQC 282 (468)
T ss_pred HHhc-ccccccccccccccchhhhhhhhhhHHHHHHHHHHHHHHHHhcHHHHHHHHHHHHHHhhcCCCCceeE-EEEccc
Confidence 4444 4432 111000 0123455677887765554544 222222221111 123345
Q ss_pred hCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh----------hhhHHHHHHHHHHH
Q psy14075 223 MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA----------RNINHLIVPNAGLG 292 (414)
Q Consensus 223 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~----------~~~~~~~~~~~~~g 292 (414)
.|+++.+.|......+++.+++..+.+++.+|++.|+++.++.++.+++.+..... ++.+......++.+
T Consensus 283 lG~s~~~~G~~~~~~~v~~i~g~~~~~~~~~~~~~r~~l~~~~~l~~~~~~~~~~l~~~~~~~~gi~~~~~~~~~~~l~~ 362 (468)
T TIGR00788 283 LPGGPSFSGMSKVVGNLGSLCGVGGYDRFLKTFPYRLLFGVTTLLYTLSSLFDLILVKRWNLAFGISDEVFVLGDSIIAE 362 (468)
T ss_pred CCCCcchhhhHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHhCceeeeeccccccCCCCeeeeeehhHHHH
Confidence 89999999999999999999999999999999999999999998888876543211 22223344556667
Q ss_pred HHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-----hHHHHHHHHHHHHHHHH
Q psy14075 293 FAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-----FEWMLFIIAILDFMYAP 365 (414)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-----~~~~~~~~~~~~~~~~~ 365 (414)
++.+... .+......+..|++..|+.+++.++..++|..+++.++|.+.+..| ++..+....++.+..++
T Consensus 363 ~~~g~~~---~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg~l~~~~g~~~~~~~~~~~~i~i~~~~~l~ 437 (468)
T TIGR00788 363 VLAQLKF---MPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGVLLMETIGITCDNSNNLWLLILGHSLAPLL 437 (468)
T ss_pred HHHHHHH---ccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHH
Confidence 7766663 3444567788889999999999999999999999999999999888 77666655554444433
No 104
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.94 E-value=7.4e-23 Score=194.00 Aligned_cols=342 Identities=16% Similarity=0.148 Sum_probs=272.1
Q ss_pred chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhH-HHHHHHHHHHHHHHHhh--hhHHHHHHHHHHHhhhhhhhhhhHHH
Q psy14075 30 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPM-FTGFVIMFLSTLIFAFG--RTYGVLFLARSLQGIGSSCSSVSGMG 106 (414)
Q Consensus 30 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l-~~~~~~~~~~~~~~~~~--~~~~~l~~~r~l~G~~~~~~~~~~~~ 106 (414)
+..++..++..+..++..|+.|.++|+-|+||.+ .+...+..+++.+..+. ++++...+..++.-++.+.......+
T Consensus 70 s~~~~~~sis~l~~all~P~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~v~~~~~~~~~~l~iia~v~~~~~~vfyna 149 (477)
T PF11700_consen 70 SLWLYANSISGLLQALLAPFLGAIADYGGRRKRFLLIFTLLGVLATALLWFVSPGQWWLALVLFIIANVGYEASNVFYNA 149 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557889999999999999999999999976664 45555666677776663 34555556666767888888888999
Q ss_pred HHhhcCCCcchh--------------------------hHHHHHHHHHHhhhhhhchhhhhHhhhh--------cCChhH
Q psy14075 107 MLAERYPDDRER--------------------------GNAMGIALGGLALGVLIGPPFGGIMYQF--------VGKTAP 152 (414)
Q Consensus 107 ~i~~~~~~~~~r--------------------------~~~~~~~~~~~~~g~~ig~~l~~~l~~~--------~gw~~~ 152 (414)
++.|..++ +++ ++..+.-.....+|.++.-.+.-.+... .+-|..
T Consensus 150 ~LP~la~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~~~~~~~~~~~~~~~~r~~ 228 (477)
T PF11700_consen 150 YLPDLARP-EPRVRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLLLVISPGSTASNTWAIRVA 228 (477)
T ss_pred HhHhhcCC-ChhhhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccchhhhHH
Confidence 99999995 777 8999988888889988887776554322 234888
Q ss_pred HHHHHHHHHHHHHHHHHhccCCCC-CCCCCC------------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHH
Q psy14075 153 FLILSALALGDGLLQLLLLQPGVV-KQEVEP------------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWM 219 (414)
Q Consensus 153 f~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (414)
+.+.++.-++..+..++..|++++ +..++. +.++++.|.|......+..++..-+...+......|.
T Consensus 229 ~~~~a~ww~vfsiP~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~t~k~~~~~~~~~~fLia~~l~~dg~~ti~~~~~i~a 308 (477)
T PF11700_consen 229 FLIVALWWLVFSIPLFLWLPDRPGPRPLPSGSSYLRFGFKRLWRTFKEIRKLRQLFLFLIAYFLYSDGVNTIISFAGIYA 308 (477)
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999888888888888877765 222221 1245566778888889999999999999999999999
Q ss_pred HHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhH--HHHHHHHHHHHHHHHHhhh--------hhhhHHHHHHHH
Q psy14075 220 MDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY--LAALLGLLIIGICLMMIPL--------ARNINHLIVPNA 289 (414)
Q Consensus 220 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~ 289 (414)
.+++|++..+...+.....+.+++|.++.+++.||+|.| +++..+.++..+..+.-.+ .++.+.+++..+
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 999999999999999999999999999999999999988 7777776666443332222 456777888888
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHH
Q psy14075 290 GLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 290 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~ 368 (414)
+.|+..|..++..-++ ..+..|+++.+..+|++.......+.+||.+.|.+.+.+| .+..+....++.+++.++..
T Consensus 389 ~~G~~~G~~qs~sRs~---~~~LiP~g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~ 465 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSL---FSRLIPPGREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLF 465 (477)
T ss_pred HHHHHhhhHHHHHHHH---HHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHh
Confidence 9999999887766655 5577788888999999999999999999999999999998 88899888888888887776
Q ss_pred HhcCCCc
Q psy14075 369 LLRNPPT 375 (414)
Q Consensus 369 ~~~~~~~ 375 (414)
..+.++.
T Consensus 466 ~v~~~~g 472 (477)
T PF11700_consen 466 FVDVEKG 472 (477)
T ss_pred hccchhh
Confidence 6655433
No 105
>PRK11462 putative transporter; Provisional
Probab=99.94 E-value=3.5e-23 Score=198.01 Aligned_cols=330 Identities=13% Similarity=0.081 Sum_probs=233.8
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc----cCCchh-HHHHHHHHHHHHHHHHhhhh------HHHHH
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYSLP-MFTGFVIMFLSTLIFAFGRT------YGVLF 87 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~-l~~~~~~~~~~~~~~~~~~~------~~~l~ 87 (414)
..+.+..|+++..+|.+..+.-+..++..|+.|.++|| +||||. ++++.+..+++..++...++ ...++
T Consensus 34 ~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~llf~~p~~s~~~~~~y~~ 113 (460)
T PRK11462 34 FFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCVLAYSTPDLSMNGKMIYAA 113 (460)
T ss_pred HHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHHHHHhCCCCCcchHHHHHH
Confidence 44567789999999999999999999999999999996 788655 55677888888777665543 44566
Q ss_pred HHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-------CChhHHHHHHHHH
Q psy14075 88 LARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-------GKTAPFLILSALA 160 (414)
Q Consensus 88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------gw~~~f~~~~~~~ 160 (414)
+..++..++......+..++.+|..++.+||++..++...+..+|..+++.+...+.+.. +|+....+.+++.
T Consensus 114 ~~~~~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~g~~~~~~g~~~~~~i~~ii~ 193 (460)
T PRK11462 114 ITYTLLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVLMMPLVNLIGGDNKPLGFQGGIAVLSVVA 193 (460)
T ss_pred HHHHHHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchhhhHHHHHHHHHHHH
Confidence 777788999999988999999999987799999999999999999888887765555443 5777777777777
Q ss_pred HHHHHHHHHhccCCCCCCCCC---CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHH
Q psy14075 161 LGDGLLQLLLLQPGVVKQEVE---PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPA 237 (414)
Q Consensus 161 ~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 237 (414)
++...+.+...+|++++++++ ++..+..++||.++.+....++..............|.+..+|.+ ...+.+....
T Consensus 194 ~i~~~i~~~~~kE~~~~~~~~~~~~~~l~~~~~Nk~~~~l~~~~~~~~~~~~~~~~~~~y~~~y~~g~~-~~~~~~l~~~ 272 (460)
T PRK11462 194 FMMLAFCFFTTKERVEAPPTTTSMREDLRDIWQNDQWRIVGLLTIFNILAVCVRGGAMMYYVTWILGTP-EVFVAFLTTY 272 (460)
T ss_pred HHHHHHHHhcceeccCCCccCCCHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHhHhhhhhhhhcCCh-HHHHHHHHHH
Confidence 776666665555543322221 234466788988877766666665555555555555555555543 3445666777
Q ss_pred HHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc--
Q psy14075 238 SISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR-- 313 (414)
Q Consensus 238 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-- 313 (414)
.++.+++.++.+++.||+++|+....+..+..+..+++.+.+ +.....+..++.|++.+...+....+..+..|..
T Consensus 273 ~i~~iig~~l~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~l~~~m~ad~~d~~e~ 352 (460)
T PRK11462 273 CVGNLIGSALAKPLTDWKCKVTIFWWTNALLAVISLAMFFVPMQASITMFVFIFVIGVLHQLVTPIQWVMMSDTVDYGEW 352 (460)
T ss_pred HHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHhchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhhhHH
Confidence 888899999999999999998877655444433333332222 2223344445566666665555555555565532
Q ss_pred --cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075 314 --HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF 349 (414)
Q Consensus 314 --~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~ 349 (414)
.++.-|..++..+....+|.++++.+.|.+.+..||
T Consensus 353 ~tG~r~~g~~~a~~~f~~Klg~alg~~i~g~iL~~~Gy 390 (460)
T PRK11462 353 CNGKRLTGISFAGTLFVLKLGLAFGGALIGWMLAYGGY 390 (460)
T ss_pred hcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 133336666777789999999999999999887665
No 106
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.94 E-value=4.8e-23 Score=194.01 Aligned_cols=352 Identities=17% Similarity=0.115 Sum_probs=258.2
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhc----ccCCchhHHH-HHHHHHHHHHHHHhhhhHH--------
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH----RVGYSLPMFT-GFVIMFLSTLIFAFGRTYG-------- 84 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d----r~Grr~~l~~-~~~~~~~~~~~~~~~~~~~-------- 84 (414)
.+++.+++|.+..+.+++..+..+...+.+|+.|+++| |+||||.+++ +.+...++.++.+++++++
T Consensus 27 l~~yl~~lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~~~~~l~ll~~~~~~~~~~~~~~~ 106 (477)
T TIGR01301 27 LTPYVQELGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAALVAFAVILIGFAADIGHLFGDNLD 106 (477)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHHHHHHHHHHHhCchhhhhcccccc
Confidence 45677899999999999999999999999999999999 5999999877 4666777777877876653
Q ss_pred ---------HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchh--hHHHHHHHHHHhhhhhhchhhhhHh--hhhc----
Q psy14075 85 ---------VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRER--GNAMGIALGGLALGVLIGPPFGGIM--YQFV---- 147 (414)
Q Consensus 85 ---------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r--~~~~~~~~~~~~~g~~ig~~l~~~l--~~~~---- 147 (414)
..+++-.+..++.....++..++++|.+|+ ++| +.++++.+.+.++|.++|+.+++.. .+.+
T Consensus 107 ~~~~~~~i~~~~i~~~lld~~~n~~~~p~rALiaDl~p~-~~~~~~~a~~~~~~~~~lG~ilg~~~g~~~~~~~~~~~~~ 185 (477)
T TIGR01301 107 KKTKPRAIIVFVVGFWILDVANNMLQGPCRAFLADLTGG-DARRTRIANAYFSFFMAIGNVLGYAAGAYSGLYKIFPFTK 185 (477)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccCc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHhccccc
Confidence 223333344557777888889999999995 644 6899999999999999999999875 2222
Q ss_pred ---------CChhHHHHHHHHHHHHHHHHHHhccCCCCCCC----------CC----CchhhhhccC-----hHHHHHHH
Q psy14075 148 ---------GKTAPFLILSALALGDGLLQLLLLQPGVVKQE----------VE----PPTLKSLVMD-----PYILIAAG 199 (414)
Q Consensus 148 ---------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~----~~~~~~~~~~-----~~~~~~~~ 199 (414)
+.|..|++.++..++..++..+..+|++..++ .+ ...+++++++ |.++.+++
T Consensus 186 ~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~mP~~m~~l~~ 265 (477)
T TIGR01301 186 TEACGVSCANLKSCFLIDIILLAILTYIALSAVKENPLIGSDDFINSEAAPPSKHGEEAFFGELFGAFKYLPRPVWILLL 265 (477)
T ss_pred ccccccccchHHHHHHHHHHHHHHHHHHHeeeeeccCCCccccchhhhcccccccchhhhHHHHHHHHHHCCHHHHHHHH
Confidence 56889999988888888877777666532100 00 1123343332 56788999
Q ss_pred HHHHHHHHHHhhhhchHHHHH-HHhCCCccc----------hhhHhHHHHHHHHhhhhhhhhhhhhhhh-HHHHHHHHHH
Q psy14075 200 AITFANTGIAMLEPSLPIWMM-DTMGADKWQ----------QGVSFLPASISYLIGTNLFGPLGHRMGR-YLAALLGLLI 267 (414)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~----------~g~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~ 267 (414)
..++.+++++.+..+.+.|.. +.++.++.+ ..+....+++...+.+++..++.+|+|+ |+....+.++
T Consensus 266 vqffsW~a~f~~~~y~T~~vg~~v~~~~~~~~~~y~~gvr~G~~~l~~~s~~~~i~s~~l~~l~~~~g~~k~~~~~s~~~ 345 (477)
T TIGR01301 266 VTCLNWIAWFPFILFDTDWMGREVYGGSVNQGAKYDDGVRAGAFGLMLNSVVLGITSIGMEKLCRGWGAGKRLWGIVNII 345 (477)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHcCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHH
Confidence 999999999999999888876 455543321 1233445555666777788899999984 7777888888
Q ss_pred HHHHHHHhhhhhh---------------------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc--ccchhhHHhH
Q psy14075 268 IGICLMMIPLARN---------------------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRH--TAVYGSVYAI 324 (414)
Q Consensus 268 ~~i~~~~~~~~~~---------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~ 324 (414)
.+++++...+.++ .+..++...+.|+........-.++ +.+..+ .+..|..+|+
T Consensus 346 ~~~~l~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Gi~~A~~~siPfal---~s~~~~~~~~~~G~~mgi 422 (477)
T TIGR01301 346 LAICLAATVLVTYVAKNSRYYDGDGESLPPPTGIKASALIVFAILGIPLAITYSIPFAL---ASIRSSNLGAGQGLSMGV 422 (477)
T ss_pred HHHHHHHHHHHHhhhhccccccccccccCcchhhHHHHHHHHHHhhHHHHHHHHHhHHH---HHHHccccCCCCcchhhH
Confidence 8888777765443 2445566667777777665544444 334444 2445999999
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 325 GDVAFCLGFAIGPAMSGTLVNTIG--FEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 325 ~~~~~~~g~~ig~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
.|.+..+.+.+.....|.+.+.+| ...++.+.++.++++.+..++..++
T Consensus 423 lN~~I~lpQii~sl~~g~~~~~~g~~~~~~~~~~gv~~~~aa~~~~~~~~~ 473 (477)
T TIGR01301 423 LNLAIVIPQIIVSLGSGPWDQLFGGGNLPAFVVGAVAAFVSGLLALILLPR 473 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCCeeHHHHHHHHHHHHHHHHHHhCCC
Confidence 999999999999999998777766 5667778888888887776655443
No 107
>KOG0253|consensus
Probab=99.93 E-value=2.2e-24 Score=187.56 Aligned_cols=351 Identities=13% Similarity=0.043 Sum_probs=251.3
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhh
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGS 97 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~ 97 (414)
.|...+.+|.+..|..++......+..+++..+|.++|++|||+.+.+..+...+...+.+.++|+..+.+.|.+.|+|.
T Consensus 101 ~~~l~~~w~~s~~q~~llt~~v~~gmllga~~w~l~~d~~grr~~f~~T~l~t~v~~~is~~spnf~~L~~f~~l~~~g~ 180 (528)
T KOG0253|consen 101 LPALDEVWGPSEGQAPLLTLSVFLGMLVGAMVWGLSADTIGRRKGFNLTFLVTGVFGVISGASPNFASLCVFRALWGFGV 180 (528)
T ss_pred HHHHHhhhchhhhhhhHHHHHHHhhhhhhhhhhheehhhhhcchhhhhhHHHHHHHHHhhcCCCCeehhhHHHHHHhccC
Confidence 46677888999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCC
Q psy14075 98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVK 177 (414)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~ 177 (414)
|. .|...++-.|..|. .+|...+-.. ..+.+|.+....+.-.+...+||||..........+.+...++..+.++-.
T Consensus 181 gg-~pv~~~~yle~lp~-~~r~~~~V~~-~~waig~v~ea~law~vm~~~gwr~~l~~~~~pl~~~a~f~~w~~ESpRf~ 257 (528)
T KOG0253|consen 181 GG-LPVDSAIYLEFLPS-SHRWLLTVMS-FFWAIGQVFEALLAWGVMSNFGWRYLLFTSSTPLMFAARFLVWVYESPRFY 257 (528)
T ss_pred CC-ccHhHHHHHHhccC-cCCCcchhHH-HHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhHHHHHHHHHhhcccCcchh
Confidence 99 78888888999994 8888887777 999999999999999999999999998888866666555555544322100
Q ss_pred ------------------------------------C---------------CCCCchhhhhccC---hHHHHHHHHHHH
Q psy14075 178 ------------------------------------Q---------------EVEPPTLKSLVMD---PYILIAAGAITF 203 (414)
Q Consensus 178 ------------------------------------~---------------~~~~~~~~~~~~~---~~~~~~~~~~~~ 203 (414)
+ ++.+.+..+++.. ++.......++.
T Consensus 258 ~~~G~~~kAletL~kiArmNg~qlplgvl~~s~~~~~e~e~~~~~~~~~~a~ke~rg~~~nLlsp~lrkttlllw~iwfg 337 (528)
T KOG0253|consen 258 LAKGDDYKALETLHKIARMNGKQLPLGVLESSAIDRQEQEESDLDDSKSSAAKEVRGGTTNLLSPKLRKTTLLLWRIWFG 337 (528)
T ss_pred hhcCChHHHHHHHHHHHHhcCCCCCcceeeeehhhhhhhhhhchhhhhhccccccccchHhhcChHHHHHHHHHHHHHHh
Confidence 0 0000011122211 112223333333
Q ss_pred HHHHHHhhhhchHHHHHHH-----------------h--CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHH
Q psy14075 204 ANTGIAMLEPSLPIWMMDT-----------------M--GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLG 264 (414)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~-----------------~--g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 264 (414)
..+.+++.........+.. . ..+...--.-..+..+....|.++.+++.||+|||+.+..+
T Consensus 338 nafsyyg~VLlttelfqsgd~c~~~~r~~p~e~e~~~~c~~s~~~dYrdllitslaefPGlLIt~~iverlGRKkTMal~ 417 (528)
T KOG0253|consen 338 NAFSYYGSVLLTTELFQSGDACPLYNRFLPTELETRANCPLSVAKDYRDLLITSLAEFPGLLITGVIVERLGRKKTMALS 417 (528)
T ss_pred hHHHHHHHHHHHHHHHhccCccccchhcchhHHHhhhcCCccchhHHHHHHHHHHhhCCchhHHHHHHHHhcchhHHHHH
Confidence 3344444333332222221 1 11111111223456788899999999999999999999999
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075 265 LLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV 344 (414)
Q Consensus 265 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 344 (414)
+++.+++.+.+....+.....+..+..-++.... ++....+..|.+|...|+++.|....+..+|+++.|.++ +.
T Consensus 418 l~~f~iflfll~~c~~rn~~tvllf~arafisg~---fqvaYvYtPEVyPTavRatgvGtcSsmaRIggI~~p~iA--~~ 492 (528)
T KOG0253|consen 418 LILFGIFLFLLTTCKTRNAYTVLLFTARAFISGA---FQVAYVYTPEVYPTAVRATGVGTCSSMARIGGIFSPVIA--MR 492 (528)
T ss_pred HHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhch---heEEEEecCcccchhhhhcchhhhhhHHhhhhhhhhHHH--HH
Confidence 9999998887776654433333333333443333 344455788999999999999999999999999999998 44
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075 345 NTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK 376 (414)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (414)
.......+..+.+.+++++.+...+++.+.+.
T Consensus 493 ~e~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 493 AELSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred hccceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 43443444555566667777777776655443
No 108
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=99.93 E-value=1.7e-23 Score=192.87 Aligned_cols=330 Identities=16% Similarity=0.195 Sum_probs=274.3
Q ss_pred hhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc----cCCc-hhHHHHHHHHHHHHHHHHhhhh------HHHHHH
Q psy14075 20 NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYS-LPMFTGFVIMFLSTLIFAFGRT------YGVLFL 88 (414)
Q Consensus 20 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr-~~l~~~~~~~~~~~~~~~~~~~------~~~l~~ 88 (414)
.+.+..|+++..+|.+..+.-+-.++..|+.|.+.|| +||+ +.++++.+.+++.+.++-.+++ ....++
T Consensus 38 fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i~~~l~F~~p~~~~~~k~~ya~v 117 (467)
T COG2211 38 FYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAIVAVLLFITPDFSMTGKLIYALV 117 (467)
T ss_pred HHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHHHHHHHHcCCCcccCcchHHHHH
Confidence 4567789999999999999999999999999999996 8875 4577888999999998887773 456677
Q ss_pred HHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-------hcCChhHHHHHHHHHH
Q psy14075 89 ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-------FVGKTAPFLILSALAL 161 (414)
Q Consensus 89 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gw~~~f~~~~~~~~ 161 (414)
...+.+++......+..++.++..++.+||.+..++.+.+.++|..+...+...+.. ..||+..-++.+++..
T Consensus 118 tY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv~~~g~~~~~~g~~~~~~~~~vi~~ 197 (467)
T COG2211 118 TYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLFPPLVKLFGGGDKALGYQGTALVLGVIGV 197 (467)
T ss_pred HHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhhHHHHHHHHHHHHH
Confidence 789999999999999999999999877999999999999999997777666655553 3478888899999998
Q ss_pred HHHHHHHHhccCCCCCCCC----CCchhh----hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhH
Q psy14075 162 GDGLLQLLLLQPGVVKQEV----EPPTLK----SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVS 233 (414)
Q Consensus 162 ~~~~~~~~~~~~~~~~~~~----~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 233 (414)
+..+.+++-.+|+..+.++ .+.+++ .++|||.+...++...+...+.....+....|.+..+|.+..+....
T Consensus 198 i~~l~~~~~v~ER~~~~~~~~~~~~~~~~~~~~~~~~Nrp~~~~l~~~l~~~~~~~i~~s~~~yy~~y~lg~~~l~~~~~ 277 (467)
T COG2211 198 ILLLFCFFNVKERVVETQPTKTGVKLKLKDSFLLIFKNRPLLLLLLMNLLLFIAFNIRGSIMVYYVTYVLGDPELFAYLL 277 (467)
T ss_pred HHHHHHHHHhhcccCccccCcccccccHHHHHHHHHccchHHHHHHHHHHHHHHHHHHhhhhheeEEEEcCChHHHHHHH
Confidence 8888888877776543221 123333 57799999988888888888888888888989988889888888888
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075 234 FLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYLVD 311 (414)
Q Consensus 234 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~ 311 (414)
+.....+.+++.++..++.+|+|+|++..++.++..++.+.+.+.+ +....++..++.+++.+...+...+++.++.|
T Consensus 278 ~~~~~~~~l~~~~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~f~~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vD 357 (467)
T COG2211 278 LLASGAGLLIGLILWPRLVKKFGKKKLFLIGLLLLAVGYLLLYFTPAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVD 357 (467)
T ss_pred HHHHHHHHHHHHHhHHHHHHHhchHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHhhccccccHHHhcchhh
Confidence 8888888888899999999999999999999999999888887765 45556666788889999888888888777775
Q ss_pred c----ccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch
Q psy14075 312 I----RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF 349 (414)
Q Consensus 312 ~----~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~ 349 (414)
. ...+.-|..+|.++.+..+|.+++..+.|++.+..||
T Consensus 358 yge~~TG~R~eGi~~s~~tF~~K~g~ala~~~~g~~L~~~Gy 399 (467)
T COG2211 358 YGEWKTGVRREGIVYSGMTFFRKLGLALAGFIPGWILGAIGY 399 (467)
T ss_pred HHHHHhCCCchhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 4 2344458999999999999999999999999987764
No 109
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.93 E-value=1.5e-23 Score=189.76 Aligned_cols=275 Identities=14% Similarity=0.096 Sum_probs=211.9
Q ss_pred HhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-----------
Q psy14075 78 AFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF----------- 146 (414)
Q Consensus 78 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~----------- 146 (414)
+..++++.++++-++.|.|.+...+..+.++++..++ |++++.+++.+.++++|..++|.+++.+...
T Consensus 5 ~~~~~~~~~l~~~f~~g~G~~~lq~~~n~~v~~~~~~-~~~~~~l~~~~~~~~~G~~~gP~i~~~~i~~~~~~~~~~~~~ 83 (310)
T TIGR01272 5 ASQRYYVLFLGALFVLASGLTILQVAANPYVSILGPI-ETAASRLALTQAFNKLGTTVAPLFGGSLILSGAGDLSMQVAT 83 (310)
T ss_pred HHhhHHHHHHHHHHHHHhhHHHHHhhHHHHHHHHCCc-chHHHHHHHHHHHhhhHHHHHHHHHHHHHhcCCcchhhhhhh
Confidence 3567899999999999999999999999999999985 8999999999999999999999999988732
Q ss_pred -----cCChhHHHHHHHHHHHHHHHHHHhccCCCCCCCC------CCchhhhhccChHHHHHHHHHHHHHHHHHhhhhch
Q psy14075 147 -----VGKTAPFLILSALALGDGLLQLLLLQPGVVKQEV------EPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSL 215 (414)
Q Consensus 147 -----~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (414)
..|+++|++.+.+..+..+...+...++.+++++ +..+.++.+|+|+++...+..+++.........|.
T Consensus 84 ~~~~~~~~~~~yl~ia~~~~~~~i~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~f~yvg~e~~~~~w~ 163 (310)
T TIGR01272 84 ANAEAAKVHTPYLLLAGALAVLAIIFAFLPLPELQEADVARVSSGDTTQKTSAFQFTHLVLGALGIFVYVGAEVSAGSFL 163 (310)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHccCCCCCcccccccccccccchhhHHhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999977777666555544443222111111 11122357788888888888888888899999999
Q ss_pred HHHHHHH--hCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHH
Q psy14075 216 PIWMMDT--MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGF 293 (414)
Q Consensus 216 ~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ 293 (414)
+.|+.+. +|+++.+.+...+.+..+.++|+++.+++.||+++++.+.++..+..++.++....++... ....++.|+
T Consensus 164 ~~yl~~~~~~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~-~~~~~l~g~ 242 (310)
T TIGR01272 164 VNFLSDPHALGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVA-MWFVLALGL 242 (310)
T ss_pred HHHHHhcccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHH-HHHHHHHHH
Confidence 9999864 6899999999999999999999999999999999998888887777776655544443332 334556777
Q ss_pred HHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHH
Q psy14075 294 AIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAIL 359 (414)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~ 359 (414)
+.+..+|...+. ..+..|++ .+++.++. ....+|+.+.|++.|.+.|..|.+.+|++...+
T Consensus 243 ~~s~i~P~~~s~---a~~~~~~~-~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 243 FNSIMFPTIFSL---ALNALGRH-TSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHHHHHHHHH---HHhhhhhh-hhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 777776654433 44444433 35666664 567899999999999999999988888754443
No 110
>KOG4686|consensus
Probab=99.93 E-value=4.4e-25 Score=185.26 Aligned_cols=350 Identities=17% Similarity=0.213 Sum_probs=256.2
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHh
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFA---FGRTYGVLFLARSLQG 94 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G 94 (414)
.+++.|.+++.++..++.+.|+....+-..++|++.|| +|.|..-++-.....++.+.++ ..+.+|++..+|++.|
T Consensus 68 ~~fk~d~ni~~akftLlYsvYSwPNvVlcffgGflidr~fgir~gtii~~~fv~~GqliFa~Ggi~~aFw~M~~GRF~FG 147 (459)
T KOG4686|consen 68 IDFKLDSNIEYAKFTLLYSVYSWPNVVLCFFGGFLIDRRFGIRLGTIILCIFVFLGQLIFAAGGISHAFWTMLAGRFLFG 147 (459)
T ss_pred hhhhcccccceeeeeeeeeeccCCCEEEeeecceeehhhhhhhHHHHHHHHHHHHHHHHHHhchHHHHHHHHHhhheeec
Confidence 45667788888999999999999999999999999997 7877776666666666666665 4689999999999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCC------hh---HHHHHHHHH----H
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK------TA---PFLILSALA----L 161 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw------~~---~f~~~~~~~----~ 161 (414)
+|.-..-++..+++.-|+.. |+.+.++|+.....-+|..+--.+.+++.++.+- +. .....+... +
T Consensus 148 IGgESlAVaQN~yav~wFKG-KELn~vfGlqlSvAR~GstvNf~lm~~ly~~~~~~~~~~ghT~LG~~l~~~~~tc~~sl 226 (459)
T KOG4686|consen 148 IGGESLAVAQNKYAVYWFKG-KELNFVFGLQLSVARLGSTVNFLLMPFLYDTMGRMFPGVGHTLLGLWLCFEVKTCKQSL 226 (459)
T ss_pred cCchhhhhhhcceeEEEecC-ccccchhhHHHHHHHhhceeeeeecHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHH
Confidence 99888888889999999995 9999999999999999999988888888876431 11 111111111 1
Q ss_pred HHHHHHHHhccCCCC--CCCC----CCchhhhhc-cChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHh
Q psy14075 162 GDGLLQLLLLQPGVV--KQEV----EPPTLKSLV-MDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSF 234 (414)
Q Consensus 162 ~~~~~~~~~~~~~~~--~~~~----~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~ 234 (414)
+.+...-+..+..++ +.++ +.....+.. -.|.+|.+.+..+++..+..-+...-|.++++.+|+|+..++.+.
T Consensus 227 ical~lg~~D~rAerilh~e~g~~Ge~pkLtdv~~f~ppfw~~~iicv~yyva~fPFi~lg~~fF~~rfGlS~~~a~~i~ 306 (459)
T KOG4686|consen 227 ICALSLGLSDDRAERILHLEEGFLGEEPKLTDVNTFYPPFWVLVIICVLYYVAWFPFITLGPMFFQKRFGLSAVSAGNIL 306 (459)
T ss_pred HHHHHhhhhhhHHHHHHhhhcCcccCCcccccccccCccHHHHHHHHHHHHHHHHHHhhhhHHHHHHhhCCChhhccchh
Confidence 111111111111000 0000 011111222 147889998888898888888999999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH-HHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy14075 235 LPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI-CLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR 313 (414)
Q Consensus 235 ~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 313 (414)
+.......+.+++.|.++||+|++...+.+..+..+ +-..+.+ +.+..+..+.+.|+.+........|.+. ...
T Consensus 307 s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsysllAcslWP~va---~~v 381 (459)
T KOG4686|consen 307 STVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYSLLACSLWPCVA---SLV 381 (459)
T ss_pred hhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHHHHHHHHhhhhh---hhC
Confidence 988888889999999999999998776665444433 3333333 2344567788889988887666777644 455
Q ss_pred cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hH---HHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075 314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FE---WMLFIIAILDFMYAPLLYLLRNPP 374 (414)
Q Consensus 314 ~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~---~~~~~~~~~~~~~~~~~~~~~~~~ 374 (414)
|+++.|+++|.++...++|-++.|.+.|.+.|+-| |. .-|...+.+++....+.+...+++
T Consensus 382 pE~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~~~N~kq 446 (459)
T KOG4686|consen 382 PEEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILFYLNKKQ 446 (459)
T ss_pred CHHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHhheeccc
Confidence 67888999999999999999999999999999876 33 344555566666666655555443
No 111
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=99.90 E-value=1.3e-28 Score=236.58 Aligned_cols=342 Identities=20% Similarity=0.198 Sum_probs=240.5
Q ss_pred CcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh---hHHHHHHHHHHHhhhhhhhhhhH
Q psy14075 28 ETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR---TYGVLFLARSLQGIGSSCSSVSG 104 (414)
Q Consensus 28 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~---~~~~l~~~r~l~G~~~~~~~~~~ 104 (414)
++.+.+++.+...++..+++++.|.++||+|||+.+.++.++..++.++.++++ +++.+.++|++.|++.|...+..
T Consensus 44 ~~~~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~ 123 (451)
T PF00083_consen 44 SSLLSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVS 123 (451)
T ss_pred hHHHHHHHHHHHHhhhcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 345689999999999999999999999999999999999999999999999999 99999999999999999999999
Q ss_pred HHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc---CChhHHHHHHHHHHHHHHHHHHhccCCCCC----
Q psy14075 105 MGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV---GKTAPFLILSALALGDGLLQLLLLQPGVVK---- 177 (414)
Q Consensus 105 ~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~---gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~---- 177 (414)
..++.|..|+ ++|++..++.+.+..+|..++..++..+.+.. +||..+.+.+++.++..+...+. ||.|+-
T Consensus 124 ~~~~~E~~~~-~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~-pESP~wL~~~ 201 (451)
T PF00083_consen 124 PIYISEIAPP-KHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFL-PESPRWLLSK 201 (451)
T ss_pred cccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-ccccceeccc
Confidence 9999999995 99999999999999999999988876554433 49999999998887765555444 433210
Q ss_pred ----C------C--------C--------C------CchhhhhccChH----HHHHHHHHHHH-HHHHHhhhhchHHHHH
Q psy14075 178 ----Q------E--------V--------E------PPTLKSLVMDPY----ILIAAGAITFA-NTGIAMLEPSLPIWMM 220 (414)
Q Consensus 178 ----~------~--------~--------~------~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 220 (414)
+ + + . +..+++++++++ +........+. ..+......+.|.+++
T Consensus 202 ~~~~~A~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~i~~ 281 (451)
T PF00083_consen 202 GRDEEAEKVLRKLRGKEIEDEEIEEIKAEKKESQESKASWRDLFRNKKYRKRLLIALLLQFFQQFSGINFIFYYSPSIFE 281 (451)
T ss_pred ccccccccccccccccccccccccccccccccccccceeeeecccccccccccccccccccccccccccccccccccccc
Confidence 0 0 0 0 012445555533 22222222222 2223344445555554
Q ss_pred HHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh--h--hhhh-----HHHHHHHHHH
Q psy14075 221 DTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP--L--ARNI-----NHLIVPNAGL 291 (414)
Q Consensus 221 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~--~--~~~~-----~~~~~~~~~~ 291 (414)
+ .+.+.. -.......+...++.++...+.||+|||+.++.+..++.++.+.+. . ..+. ...+....+.
T Consensus 282 ~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~l~ 358 (451)
T PF00083_consen 282 N-AGISNS--FLATLILGLVNFLGTLLAIFLIDRFGRRKLLIIGLLLMAICSLILGIIFFLGVSSSSWWSILSIVFLALF 358 (451)
T ss_pred c-cccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccceeeeec
Confidence 4 566655 2233344566677777888999999999999998888887766664 1 1111 1112222222
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH-h
Q psy14075 292 GFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYL-L 370 (414)
Q Consensus 292 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~-~ 370 (414)
....+... ......+..|.+|.+.|+++.|+......+++.++|.+...+.+..+....+.+.+.++++..+..++ .
T Consensus 359 ~~~~~~g~--~~~~~~~~~ElfPt~~R~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~i~~i~~~~~l 436 (451)
T PF00083_consen 359 FAFFSLGW--GPLPWIYTAELFPTKVRSTGIGLSYAVGRIGGFIIPFLFPYLFNNLGGWGVFLIFAGVCLIAIIFVYFFL 436 (451)
T ss_pred cccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccchhhHHHHHHHHhheeEEE
Confidence 22222111 12222456899999999999999999999999999999998888877455566656655555555544 4
Q ss_pred cCCCch
Q psy14075 371 RNPPTK 376 (414)
Q Consensus 371 ~~~~~~ 376 (414)
++.+++
T Consensus 437 pET~g~ 442 (451)
T PF00083_consen 437 PETKGK 442 (451)
T ss_pred eeCCCC
Confidence 444433
No 112
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.89 E-value=3e-20 Score=175.94 Aligned_cols=338 Identities=12% Similarity=0.087 Sum_probs=217.9
Q ss_pred hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhccc-CCchhHHHHHHHHHHHHHHHHhhh-hHHHHHHHHHHHhhhhhh
Q psy14075 22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRV-GYSLPMFTGFVIMFLSTLIFAFGR-TYGVLFLARSLQGIGSSC 99 (414)
Q Consensus 22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~l~~~~~~~~~~~~~~~~~~-~~~~l~~~r~l~G~~~~~ 99 (414)
.+++|.++.+.+.+.+.+.....++.+++|+++||+ ||||+++++.++.+++.++.+..+ +...+++...+.++|.|.
T Consensus 37 ~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~lg~lll~~~~~~~~~~~l~l~li~iG~G~ 116 (493)
T PRK15462 37 TNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMAIGHVVLGASEIHPSFLYLSLAIIVCGYGL 116 (493)
T ss_pred HHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHhhcchhHHHHHHHHHHHhccc
Confidence 567899999999999999999999999999999999 999999999999999987776543 223344444555566777
Q ss_pred hhhhHHHHHhhcCCCc-chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc---CCC
Q psy14075 100 SSVSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ---PGV 175 (414)
Q Consensus 100 ~~~~~~~~i~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~---~~~ 175 (414)
..+...++++|.+|++ ++|.+++++.....++|..++|.+.+++.+..||++.|.+.++..++..+..+...+ +..
T Consensus 117 ~~~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~~Gw~~~F~iaaigm~l~li~~~~~~~~l~~~~ 196 (493)
T PRK15462 117 FKSNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEEYSWAMGFGLAAVGMIAGLVIFLCGNRHFTHTR 196 (493)
T ss_pred ccccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhhhChHHHHHHHHHHHHHHHHHHHHhhhhhccCC
Confidence 7777788999999842 269999999999999999999999999999999999999877654443333332221 110
Q ss_pred C-CCCCC-Cchh-----------------------h------------------------hhc---cChHHH---HHHHH
Q psy14075 176 V-KQEVE-PPTL-----------------------K------------------------SLV---MDPYIL---IAAGA 200 (414)
Q Consensus 176 ~-~~~~~-~~~~-----------------------~------------------------~~~---~~~~~~---~~~~~ 200 (414)
. ++++. ++.. . +.. .+++++ .+.+.
T Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~er~r~~~~~~l~~~ 276 (493)
T PRK15462 197 GVNKKVLRATNFLLPNWGWLLVLLVATPALITVLFWKEWSVYALIVATIIGLGVLAKIYRKAENQKQRKELGLIVTLTFF 276 (493)
T ss_pred CCCCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHhhHHHHHHHHHH
Confidence 0 00000 0000 0 000 011222 22223
Q ss_pred HHHHHHHHHhhhhchHHHHHHHh-----CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhh--H-----HHHHHHHHHH
Q psy14075 201 ITFANTGIAMLEPSLPIWMMDTM-----GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR--Y-----LAALLGLLII 268 (414)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~-----g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~--~-----~~~~~~~~~~ 268 (414)
..+.+..+....+.+..|.++.. |++ ...+++.+...+..++..++.+++=.|..+ | .-..+++++.
T Consensus 277 ~~~Fw~~~~Q~~~sl~lfa~~~vd~~~~g~~-ip~~~~qslNp~~ii~l~P~~a~lw~~l~~~~~~~s~~~Kfa~g~~~~ 355 (493)
T PRK15462 277 SMLFWAFAQQGGSSISLYIDRFVNRDMFGYT-VPTAMFQSINAFAVMLCGVFLAWVVKESVAGNRTVRIWGKFALGLGLM 355 (493)
T ss_pred HHHHHHHHHHhhHHHHHHHHHhccchhccee-eCHHHHHhHhHHHHHHHHHHHHHHHHHHhcCCCCCCcHHHHHHHHHHH
Confidence 33334444444455555555532 222 235567777777777777766665444421 1 1256788888
Q ss_pred HHHHHHhhhh---------hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHH-HHHHhHHHH
Q psy14075 269 GICLMMIPLA---------RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAF-CLGFAIGPA 338 (414)
Q Consensus 269 ~i~~~~~~~~---------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~ig~~ 338 (414)
+++++.+.+. .+.++++...++..++.-+..|...+. +.+..|++.+|..+|...... .+|..++..
T Consensus 356 g~~f~~l~~~~~~~~~~~~~s~~wl~~~~~~~t~gEl~~sPvgls~---~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~ 432 (493)
T PRK15462 356 SAGFCILTLSARWSAMYGHSSLPLMVLGLAVMGFAELFIDPVAMSQ---ITRIEIPGVTGVLTGIYMLLSGAIANYLAGV 432 (493)
T ss_pred HHHHHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHHChHHHHH---HHHhChHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8887766542 134455667777888888887666654 567788889999999875422 455555444
Q ss_pred HHHHHHh------------hhchHHHHHHHHHHHHHH
Q psy14075 339 MSGTLVN------------TIGFEWMLFIIAILDFMY 363 (414)
Q Consensus 339 ~~g~l~~------------~~g~~~~~~~~~~~~~~~ 363 (414)
+.+...+ ...|...|...+...++.
T Consensus 433 ~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~ 469 (493)
T PRK15462 433 IADQTSQASFDASGAINYSINAYIEVFDQITWGALAC 469 (493)
T ss_pred HHHHhccccCCccccccchhhhHHHHHHHHHHHHHHH
Confidence 4443321 113556677666655554
No 113
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.88 E-value=3.2e-20 Score=166.10 Aligned_cols=340 Identities=17% Similarity=0.143 Sum_probs=266.1
Q ss_pred chHHHHHHHHHHHHHHhhhHHHHhhcccCCchh-HHHHHHHHHHHHHHHHhhhh--H-HHHHHHHHHHhhhhhhhhhhHH
Q psy14075 30 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLP-MFTGFVIMFLSTLIFAFGRT--Y-GVLFLARSLQGIGSSCSSVSGM 105 (414)
Q Consensus 30 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~-l~~~~~~~~~~~~~~~~~~~--~-~~l~~~r~l~G~~~~~~~~~~~ 105 (414)
+..|...++..+..++.+|+.|.++|+.|+||. +-....+..++..+..++++ + +..++...+..++.....+...
T Consensus 58 a~~gy~~aia~llia~LapiLG~iaD~~g~Rk~~~~~f~~i~i~~~~~L~~i~~~s~~~~~l~~~il~~i~~~~s~Vfyd 137 (438)
T COG2270 58 AYWGYASAIAGLLIALLAPILGTIADYPGPRKKFFGFFTAIGIISTFLLWFIPPGSYLLLLLLFLILASIGFEFSNVFYD 137 (438)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhccCCCcchHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHhcchhheehh
Confidence 456888899999999999999999999997665 44555555666666666654 4 4445566888899999999999
Q ss_pred HHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhH---hh---------------hhcCChhHHHHHHHHHHHHHHHH
Q psy14075 106 GMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGI---MY---------------QFVGKTAPFLILSALALGDGLLQ 167 (414)
Q Consensus 106 ~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~---l~---------------~~~gw~~~f~~~~~~~~~~~~~~ 167 (414)
+++.+..+ +++-++..+.-.....+|+.+.-+..-. .. +...-|..+.+.++-.++..++.
T Consensus 138 s~L~~~~~-k~~~~riS~lg~~~gylgs~i~li~~~~~~~~~~~~~~~~~l~~l~~~~~~~~ri~~~l~A~W~li~~iPm 216 (438)
T COG2270 138 SMLPRLTT-KDNMGRISGLGWALGYLGSVILLIFVVLGFALGQQTGITIILLGLPPADGEDVRITGLLAALWWLLFALPM 216 (438)
T ss_pred hHhhhhcC-ccccCcccccccccccccchHHHHHHHHHHhcccccceeEEeeccCccccccchhHHHHHHHHHHHHHhHH
Confidence 99999998 4888888777666666666555444311 11 22346888999999988888888
Q ss_pred HHhccCCCCCCCCC-----------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHH
Q psy14075 168 LLLLQPGVVKQEVE-----------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLP 236 (414)
Q Consensus 168 ~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~ 236 (414)
++..++.++...+. ..+++++.+++.+....+..++..-+.+........|....+|++..+..++...
T Consensus 217 ~~~v~~~~~~~~~~~~~l~~g~k~L~~t~k~i~~~~~i~~FLiA~~~~~DGv~til~~~~~fg~~~~gls~~~lll~g~~ 296 (438)
T COG2270 217 ILNVHDAEKISSPPPTALRNGFKELKSTFKEIRGRKNLVLFLIARFFYIDGVNTILAMGGVFGAADLGLSSTELLLIGIA 296 (438)
T ss_pred HhcccccccccccchHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCccHHHHHHHHHH
Confidence 88877665432111 1245677778888888889999988889999999999998899999999999999
Q ss_pred HHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc
Q psy14075 237 ASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA 316 (414)
Q Consensus 237 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 316 (414)
..+..++|.++.|++.||++.|+++..+.++..+..+...+.......++..++.|+..|..++..-+ +..+..|++
T Consensus 297 ~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA~SRS---y~~~lvp~~ 373 (438)
T COG2270 297 LSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQASSRS---YLARLVPKG 373 (438)
T ss_pred HHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHHHHHH---HHHHhCCCc
Confidence 99999999999999999999999999998888877776666665666677778888888888665554 466778888
Q ss_pred chhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 317 VYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 317 ~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
+-++.+|+++........+||.+.+.+.+.+| .+..+....++..++.+++...+.+
T Consensus 374 k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 374 KEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred cccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 88999999999999999999999999999887 6666666666666666665555443
No 114
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=99.87 E-value=1.4e-18 Score=156.07 Aligned_cols=345 Identities=17% Similarity=0.142 Sum_probs=259.3
Q ss_pred hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccC-----CchhHH-HHHHHHHHHHHHHHhh-----h--------
Q psy14075 21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-----YSLPMF-TGFVIMFLSTLIFAFG-----R-------- 81 (414)
Q Consensus 21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~-~~~~~~~~~~~~~~~~-----~-------- 81 (414)
+..|++++..-.+.+.+...+... ..+.+|..+|+.+ ||..++ .|.++...+..+..++ .
T Consensus 6 MIvEL~vpA~lv~~lval~~~~ap-~R~~~G~~SD~~~s~~G~rRtPyI~~G~~~~~~g~~~ap~a~~~l~~~~~~~~~~ 84 (403)
T PF03209_consen 6 MIVELGVPAWLVALLVALHYLVAP-LRVWFGHRSDTHPSILGWRRTPYIWGGTLLQAGGLAIAPFALLLLAESGQQSSGP 84 (403)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHH-HHHHhccccccCcccCcCCchhhhHHHHHHHHHHHHHHHHHHHHHcccccccccc
Confidence 458899999999999999888775 5999999999998 776644 5666666666555442 2
Q ss_pred h-HH--HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhH---HHH
Q psy14075 82 T-YG--VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAP---FLI 155 (414)
Q Consensus 82 ~-~~--~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~---f~~ 155 (414)
. .+ ...+...+.|+|.+...++..++++|..|| |+|+++.++...+.-+|.+++..+.+.+.+.++-.-. +..
T Consensus 85 ~~~g~~~a~l~F~l~G~G~~~s~T~~lALl~D~~~e-~~R~~~v~ivw~Mli~G~iv~ai~~g~lL~~~s~~rL~~v~~~ 163 (403)
T PF03209_consen 85 FWLGLALAALAFLLYGLGVHASGTSFLALLADLAPE-ERRPRVVAIVWVMLIVGIIVSAIVFGRLLDPFSPERLIQVIQG 163 (403)
T ss_pred cHHHHHHHHHHHHHHHhhHhHhHHHHHHHHHhcCCH-hhhhhhHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 1 22 334555788999999999999999999995 9999999999999999999999999998887653322 222
Q ss_pred HHHHHHHHHHHHHHhccCCCCCCC----CCC----chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCc
Q psy14075 156 LSALALGDGLLQLLLLQPGVVKQE----VEP----PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADK 227 (414)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 227 (414)
.+++.++..++..+-.|++.++.+ +++ ..++++.++|+........++...+++.-...+-.|--+++|++.
T Consensus 164 ~a~i~~~l~~ia~wg~E~r~~~~~~~~~~~~~~f~~a~~~~~~~~~a~~f~~fl~l~t~a~~~QD~iLEPygg~Vfgmsv 243 (403)
T PF03209_consen 164 VALIALLLNLIALWGQEPRRSRRAAAAERPRPPFREAWRQVWASPQARRFFVFLFLGTLAFFMQDVILEPYGGEVFGMSV 243 (403)
T ss_pred HHHHHHHHHHHHHHhcccCCcccccCCCCCCccHHHHHHHHHhCCChhHHHHHHHHHHHHHHhhHHHcCCchhHHcCCCH
Confidence 233333333333333332221111 111 246677788888887777888888888888888889999999999
Q ss_pred cchhhHhHHHHHHHHhhhhhhhhhhh-hhhhHHHHHHHHHHHHHHHHHhhh---hhhhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075 228 WQQGVSFLPASISYLIGTNLFGPLGH-RMGRYLAALLGLLIIGICLMMIPL---ARNINHLIVPNAGLGFAIGMVDSSMM 303 (414)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~g~l~d-~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~ 303 (414)
.+..-+....+.+..++..+.+++.. |.++++...++.....+++.++.. ..+.+.+....+++|++.|.......
T Consensus 244 ~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~G~f~vgal 323 (403)
T PF03209_consen 244 GETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGNGLFTVGAL 323 (403)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhhhHHHHHHH
Confidence 99999999999999999999998776 677777777888887777666554 34677788889999999998854443
Q ss_pred hhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh----------hchHHHHHHHHHHHHHHHHHHHHh
Q psy14075 304 PELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT----------IGFEWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~----------~g~~~~~~~~~~~~~~~~~~~~~~ 370 (414)
+...+..++++.|..+|.....+.+...++..++|.+.|. .+|..+|.+-++..+++..+...+
T Consensus 324 ---s~mM~lt~~~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll~~l 397 (403)
T PF03209_consen 324 ---SLMMDLTSAGRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLLGRL 397 (403)
T ss_pred ---HHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHh
Confidence 3455666677789999999999999999999999998873 246777777777766666555444
No 115
>KOG2563|consensus
Probab=99.80 E-value=9e-18 Score=151.20 Aligned_cols=353 Identities=14% Similarity=0.069 Sum_probs=247.7
Q ss_pred hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh------hHH--HHHHHHHHH
Q psy14075 22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR------TYG--VLFLARSLQ 93 (414)
Q Consensus 22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~------~~~--~l~~~r~l~ 93 (414)
..-+| +....-|+.-+|.+.+....+++-|+.||+|-|...+++..+..++..+-..+. .++ ....+..+.
T Consensus 72 ~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~Gq~ia 150 (480)
T KOG2563|consen 72 NSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTGQSIA 150 (480)
T ss_pred HHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHhHHHH
Confidence 34455 667778999999999999999999999999999999999999999998876653 345 667888888
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh------cCChh--HHHHHHHHHHHHHH
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF------VGKTA--PFLILSALALGDGL 165 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~------~gw~~--~f~~~~~~~~~~~~ 165 (414)
+..+-........+..-||++ ++|..+..+-.++..+|..++.++...+..+ ..|.. .|+....+..+.++
T Consensus 151 a~Aq~Fim~lPskiA~~WF~~-~qra~A~~~~v~~n~LGvavg~llppilV~~~~~~~~~~~~~~~~f~~~~~l~~l~l~ 229 (480)
T KOG2563|consen 151 AAAQPFILGLPSKIAAVWFPP-DQRAIATVLGVMGNPLGVAVGFLLPPILVPSSKDSEDNSWLFFTLFLGVECLAALLLA 229 (480)
T ss_pred HHhhhHhhccccHHHHhhCCc-chhhhhhhHHHhcchHHHHHHhhccceecCCCCCcchhHHHHHHHHHHHHHHHHHHHH
Confidence 888888877767888899996 9999999999999999988888887777643 34554 35545555544444
Q ss_pred HHHHhccCCCCCCC------CC----CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhH
Q psy14075 166 LQLLLLQPGVVKQE------VE----PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFL 235 (414)
Q Consensus 166 ~~~~~~~~~~~~~~------~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~ 235 (414)
+..+..+++++... .+ .++.++.++|+++.+..+.+......+++..+.+-.-+.. -|++...+|+...
T Consensus 230 l~~~~~~~~P~tPps~s~~~~~~~~f~~si~~~~~n~~F~il~~~ygi~~g~F~~l~~~l~~~l~~-sgY~~~~aG~ig~ 308 (480)
T KOG2563|consen 230 LVLFVFTKKPPTPPSASQAALQDASFPKSIKSCFKNRQFIILAICYGIGLGLFNSLSTLLNLALCP-SGYEGVFAGYIGA 308 (480)
T ss_pred HHHHhcCCCCCCCCchhHhhhhcCcHHHHHHHHHcCccHHHHHHHHhhhHHHHHHHHHHhhhcccc-ccCCccccchhHH
Confidence 44444443222111 11 2356788999999998888887777777776666544444 4778788999999
Q ss_pred HHHHHHHhhhhhhhhhhhhhhh-HHHHHHHHHHHHHHHHH-hhhhh---hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q psy14075 236 PASISYLIGTNLFGPLGHRMGR-YLAALLGLLIIGICLMM-IPLAR---NINHLIVPNAGLGFAIGMVDSSMMPELGYLV 310 (414)
Q Consensus 236 ~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~i~~~~-~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 310 (414)
...+++++++.+.|.+.||.+. |...++......++... ..... +.+.+.....++|++.....|...-. ..
T Consensus 309 l~iv~Gmlga~~~gii~Dktk~fk~~~~v~~~~~~v~~~~l~~~t~~~~~~viv~~t~~~~g~~~~~~~Pig~El---gv 385 (480)
T KOG2563|consen 309 LMIVAGMLGALASGIIADKTKKFKLTTLVLYLFALVGTLMLLTCTLFLGDSVIVFTTCGLLGFFGTGYLPIGFEL---GV 385 (480)
T ss_pred HHHHHHHHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHHHHHhhccCCceEehhhhHHHHHHhhcCCCCcceee---ee
Confidence 9999999999999999999876 44455555444444222 22221 22333444555555555444433322 33
Q ss_pred hcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc----hHHHHHHHHHHHHHHHHHHHHhcCCCchhhhh
Q psy14075 311 DIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG----FEWMLFIIAILDFMYAPLLYLLRNPPTKEEKK 380 (414)
Q Consensus 311 ~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 380 (414)
|..-+..-++..|+.+...++-+.+-..+.+...+..+ +...-+.....+.+..++..++++..+|.+.+
T Consensus 386 E~TyPv~E~tSsGll~~~gq~f~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~l~~~lva~~r~~y~R~~~e 459 (480)
T KOG2563|consen 386 ETTYPVAEGTSSGLLNLSGQIFGVILVFIMGILAEDLGPPGNTFPANIFLTVSALLGAILVAFFRPDYRRLRAE 459 (480)
T ss_pred eeccccCCcccceeEEeehhHHHHHHHHHHHHHhhccCCCCCCccchhHhHHHHHHHHHHHhhhhhhHHhHhhh
Confidence 43333333788899999888888888999998888777 55455566666666666666666655554443
No 116
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.78 E-value=1e-16 Score=146.92 Aligned_cols=344 Identities=16% Similarity=0.195 Sum_probs=236.3
Q ss_pred hcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhhhh
Q psy14075 25 LMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGR--TYGVLFLARSLQGIGSSCSS 101 (414)
Q Consensus 25 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~ 101 (414)
+|.++++..-+.+.|..-.-+..+++|+++|| +|+||++..|.++.++|-++.+... +...++++-.+.++|.|..-
T Consensus 56 Lg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K 135 (498)
T COG3104 56 LGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTRRTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFK 135 (498)
T ss_pred CCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhcccccc
Confidence 55999988888888887777889999999999 8999999999999999999999884 78899999999999999999
Q ss_pred hhHHHHHhhcCCCc-chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC---C
Q psy14075 102 VSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV---K 177 (414)
Q Consensus 102 ~~~~~~i~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~---~ 177 (414)
+...++++|.+|++ .+|-..++++.++.++|+.++|++.+++.+.+||+..|...++-..+..+..+..++.... +
T Consensus 136 ~NiS~llg~ly~~~DprrD~gFt~fY~~iNiGsl~~p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~~~~ 215 (498)
T COG3104 136 PNISSLLGELYPKDDPRRDGGFTLFYMGINIGSLIAPIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGIGGV 215 (498)
T ss_pred ccHHHHHHHhcCCCCcccCCCccEEEEEeehHHHHHHHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCCCCC
Confidence 99999999999842 2467789999999999999999999999999999999999988877766665554421110 0
Q ss_pred CCCCCch--------------------------------------------hhhhc------cC-hHHHH---HHHHHHH
Q psy14075 178 QEVEPPT--------------------------------------------LKSLV------MD-PYILI---AAGAITF 203 (414)
Q Consensus 178 ~~~~~~~--------------------------------------------~~~~~------~~-~~~~~---~~~~~~~ 203 (414)
+++.+.+ ..+.+ .+ ++.+. +.+...+
T Consensus 216 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~er~r~~~~~~Lfl~~~i 295 (498)
T COG3104 216 PDPNPLSFNFLLPVLGGLVVMILAALLTLLLNQNTFSGVLLVISILIAIIYFAEAFRSPKVFDERRRLLAAIPLFLFAVI 295 (498)
T ss_pred CCccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCccHHHHHHHHHHHHHHHHHHH
Confidence 0000000 00111 11 22222 2333333
Q ss_pred HHHHHHhhhhchHHHHHHHhCCC----ccchhhHhHHHHHHHHhhhhhhhhhhhhhhhH-------HHHHHHHHHHHHHH
Q psy14075 204 ANTGIAMLEPSLPIWMMDTMGAD----KWQQGVSFLPASISYLIGTNLFGPLGHRMGRY-------LAALLGLLIIGICL 272 (414)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~g~~----~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~-------~~~~~~~~~~~i~~ 272 (414)
.+..+....+.+..|..+..+.+ .....++-+...+.-++..++..++-.|.+++ .-..+++.+++.++
T Consensus 296 FW~~~~Q~~ssl~~~a~~~v~~~~~g~~vp~~~fQslNp~~Iii~~pI~a~l~~~l~~~~~~ps~~~KFalGl~l~g~~f 375 (498)
T COG3104 296 FWALYEQMGSSLNLYADRNVNRQIFGFEVPPAWFQSLNPFFIILFSPILAALWTKLGRGNKQPSTPIKFALGLILAGLGF 375 (498)
T ss_pred HHHHHHhccchHHHHHHHhhcccccceecCHHHHHhhCHHHHHHHHHHHHHHHhHhhcCCCCCCcchHHHHHHHHHHHHH
Confidence 44444445555556655432222 12456677777788888887777776664322 23456777777776
Q ss_pred HHhhhh----------hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHH
Q psy14075 273 MMIPLA----------RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGT 342 (414)
Q Consensus 273 ~~~~~~----------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~ 342 (414)
+++... .+.+..+...++.+++--+..|...+. +....|+...+..++........|..++..+.+.
T Consensus 376 l~l~~~~~~~~~~~~~~s~~~lil~y~l~s~gEL~iSpvGLs~---~t~laP~~~~s~~ma~wfLt~a~~~~l~g~va~~ 452 (498)
T COG3104 376 LILLLAGIWFGGPSGLVSVWWLVLSYVLQSFGELFISPVGLSM---VTKLAPPALKSFIMAMWFLTVAAGQTLGGQVAGL 452 (498)
T ss_pred HHHHHHHHhhcCCCCCcCHHHHHHHHHHHHHHHHHhCHHHHHH---HHHhChHHHHHHHHHHHHHHHHHHHHhhceeccc
Confidence 666543 135566677778888888776655544 5677777777777777666666666666665552
Q ss_pred ------HHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 343 ------LVNTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 343 ------l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
..+.......|...+...++..+..+...
T Consensus 453 ~~~~~~~~~~~~~~~~F~~~g~v~i~~~~~~~~~~ 487 (498)
T COG3104 453 TAVTDPAYTAFIEGRVFGTIGVVAIVIGILLLLLS 487 (498)
T ss_pred ccccchhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Confidence 23334456677777776666655554443
No 117
>KOG2816|consensus
Probab=99.75 E-value=2.8e-16 Score=147.66 Aligned_cols=299 Identities=21% Similarity=0.299 Sum_probs=227.7
Q ss_pred HHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh--hhhhhhhHHHHHhhcCCCcc
Q psy14075 39 KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG--SSCSSVSGMGMLAERYPDDR 116 (414)
Q Consensus 39 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~--~~~~~~~~~~~i~~~~~~~~ 116 (414)
..+...+.++..|.++||+|||..+....+...+..+...+.. +|.++ +.|+. .+.......++++|... ++
T Consensus 71 ~~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~~~----~~~l~g~~~~~~s~~~a~vadis~-~~ 144 (463)
T KOG2816|consen 71 AGLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWFFL----LLGLSGGFSAIFSVGFAYVADISS-EE 144 (463)
T ss_pred hHHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHHhh----hcccccchhhhhhhhhhheeeccc-hh
Confidence 3677889999999999999999999999998888888777665 33333 44432 33456667899999999 59
Q ss_pred hhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCCCCC---------Cc----
Q psy14075 117 ERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVE---------PP---- 183 (414)
Q Consensus 117 ~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~---- 183 (414)
+|....|+.+.....+..++|.+++.+.+..|.-.+|.+..+..++..+..+.+.||+..+++++ ..
T Consensus 145 ~R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~~~~~~~~~~~~~~~~~~~~ 224 (463)
T KOG2816|consen 145 ERSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQEKERSDATLRELTPGSLDSS 224 (463)
T ss_pred HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCccccccccccccCCCcccch
Confidence 99999999999999999999999999999999999999999999998888888888765443332 00
Q ss_pred ----hh---hhhccChHHHHHHHHHHHHHHHHHh-hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhh-hhhhh
Q psy14075 184 ----TL---KSLVMDPYILIAAGAITFANTGIAM-LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFG-PLGHR 254 (414)
Q Consensus 184 ----~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g-~l~d~ 254 (414)
.+ .+.-++|..+.+++..++....... ..-..+.|+...+++++.+.+.+.+..+....++..+.. .+...
T Consensus 225 ~~~~~~~~~~~~~~~r~~l~l~l~~~~~~~~~~~~~~~~~~~yl~~~f~w~~~~~s~~~~~~~~~~~i~~l~~~~~l~~~ 304 (463)
T KOG2816|consen 225 HVADAFQSLTKVGPDRLLLLLLLVAFLSSLPEAGGASDVLLLYLKAKFGWNKKEFSDLLSLVSILGIISQLLLLPLLSSI 304 (463)
T ss_pred hhhhhhhhhcccCCCccchHHHHHHHHHHHHHhcCceeEEEEEEeeecCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01 1112234455545444444433332 222446778888999999999999999999999888766 67777
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHh
Q psy14075 255 MGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFA 334 (414)
Q Consensus 255 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ 334 (414)
++.++.+..|+....+....+.+..+.|..+....+.++.. ...+... +......+++++|++.++...+..+...
T Consensus 305 l~~~~~i~lGl~~~~~~~~~~af~~~~w~~~~~~v~~~~~~-~~~pa~~---s~~s~~v~~~e~g~v~~~is~i~~l~~~ 380 (463)
T KOG2816|consen 305 LGEKRLISLGLLSEFLQLLLFAFATETWMMFAAGVVVALAG-IVFPAIR---AFASILVSPEEQGKVFGIISGIEGLSGV 380 (463)
T ss_pred HhhhhHhhHHHHHHHHHHHHHHHhccchhhhHHHHHHHhhc-chhHHHH---hHHHhhcccccccchhhHHHHHHHHhhh
Confidence 88888888999999999999999988887666555544433 2323333 3455566688889999999999999999
Q ss_pred HHHHHHHHHHhhh
Q psy14075 335 IGPAMSGTLVNTI 347 (414)
Q Consensus 335 ig~~~~g~l~~~~ 347 (414)
++|.+.+.++..+
T Consensus 381 ~~~~~~~~i~~~t 393 (463)
T KOG2816|consen 381 VSPALYGNIFALT 393 (463)
T ss_pred hhHHHHHHHHHHH
Confidence 9999999887643
No 118
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=99.74 E-value=1.3e-15 Score=144.14 Aligned_cols=353 Identities=19% Similarity=0.210 Sum_probs=236.0
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccC-----CchhHHHHHHHHHHHHHHHHhh----hhHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVG-----YSLPMFTGFVIMFLSTLIFAFG----RTYGVLF 87 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~G-----rr~~l~~~~~~~~~~~~~~~~~----~~~~~l~ 87 (414)
..|.+++++|+++++...+.+...+...+ .++.|.++|.+- ||+-++++.++.+++.+..+.. .+.....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 45778899999999999999999988866 889999999863 4455667777776666655543 3566666
Q ss_pred HHHHHHhhhhhhhhhhHHHHHhhcCCCc-chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHH
Q psy14075 88 LARSLQGIGSSCSSVSGMGMLAERYPDD-RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLL 166 (414)
Q Consensus 88 ~~r~l~G~~~~~~~~~~~~~i~~~~~~~-~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~ 166 (414)
+.-++..+|.+.......+++.|....+ ++|+...+.......+|.+++..++|.+.+..++|..|.+.+++..+..+.
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~~ 170 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPESRGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLIV 170 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCchhHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHHH
Confidence 7778889999999999999999987321 337888888899999999999999999999999999999999888887777
Q ss_pred HHHhccCCCCCCC-------CC------------CchhhhhccChHHHHHHH-HHHHHHHHHHhhhhchHHHHHHHhC--
Q psy14075 167 QLLLLQPGVVKQE-------VE------------PPTLKSLVMDPYILIAAG-AITFANTGIAMLEPSLPIWMMDTMG-- 224 (414)
Q Consensus 167 ~~~~~~~~~~~~~-------~~------------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g-- 224 (414)
.++..+|+++.++ ++ -.+.++.++.|.++...+ ..++............-.+..+..+
T Consensus 171 ~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~a~~fy~~~~~~~gp 250 (433)
T PF03092_consen 171 ALFLLEERKVRPADEVFSFGKEEVPCLFGSFREQLSELWRALQQRAIWQPILFFIFFFNLPPSISSASSFYFQTDALGGP 250 (433)
T ss_pred HHHhhhhccccccchhhcccccccchhhHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhccCCCCccEEEEEecccccc
Confidence 7766665211110 00 012334556666665544 3333222221111100111223345
Q ss_pred -CCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH-hhhh---------hhhHHHHHHHHHHHH
Q psy14075 225 -ADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM-IPLA---------RNINHLIVPNAGLGF 293 (414)
Q Consensus 225 -~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~-~~~~---------~~~~~~~~~~~~~g~ 293 (414)
+++...+....+..++.++|..+..+...+..-|+++....++..+..+. +.+. ++.+-...-.++..+
T Consensus 251 ~fs~~f~~~~~~vg~~~~l~g~~~y~~~~~~~~~R~~~~~t~~~~~~~~l~~~~lv~~~n~~~Gi~d~~f~lgd~~l~~~ 330 (433)
T PF03092_consen 251 HFSPSFYGTLSIVGSIASLLGILLYRKYFSNWSWRRIFVVTTLVSVLASLFDLLLVTRWNLDLGIPDQWFALGDTILEEV 330 (433)
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcccEEEEEEEeeeeCcCCeEEEEEhHHHHHH
Confidence 78878888887788888888888877777777777777666665544332 1111 111111222233333
Q ss_pred HHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch--------HHHHHHHHHHHHHHHH
Q psy14075 294 AIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF--------EWMLFIIAILDFMYAP 365 (414)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~--------~~~~~~~~~~~~~~~~ 365 (414)
..... +.+.....++..|+..-|+.+++..++.++|..++..++..+.+.++. ....++..++.++...
T Consensus 331 ~~~i~---~mP~lvl~a~lcP~G~Egt~yall~s~~Nlg~~~s~~lg~~l~~~~~vt~~~f~~l~~lili~~~~~ll~l~ 407 (433)
T PF03092_consen 331 IGMIA---FMPSLVLAARLCPKGSEGTVYALLASFSNLGSSVSSTLGAFLMELFGVTRDDFSNLWLLILICSVIQLLPLP 407 (433)
T ss_pred HHHHH---HHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccccchHHHHHHHHHHHHHHHH
Confidence 33332 345555677888998889999999999999999999999998887652 2333444444444444
Q ss_pred HHHHhcCC
Q psy14075 366 LLYLLRNP 373 (414)
Q Consensus 366 ~~~~~~~~ 373 (414)
+..+++++
T Consensus 408 ll~lLp~~ 415 (433)
T PF03092_consen 408 LLFLLPPQ 415 (433)
T ss_pred HHHHcCCC
Confidence 44445443
No 119
>KOG3626|consensus
Probab=99.73 E-value=4e-16 Score=150.35 Aligned_cols=252 Identities=19% Similarity=0.181 Sum_probs=208.4
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh---------------
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR--------------- 81 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--------------- 81 (414)
.+..+.+.|+++.++.|++.+.+=++..+...+..+..-|.-|-|.+-+|.++.+++.+++++-+
T Consensus 119 ~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPHf~~~~y~~~~~~~~~ 198 (735)
T KOG3626|consen 119 VITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPHFFSGPYEYELEVIKQ 198 (735)
T ss_pred hhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChHHhcCcchhhhhhhhc
Confidence 45778899999999999999999999999999999999999999999999999999999997631
Q ss_pred ----h--------------------------------HH-HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHH
Q psy14075 82 ----T--------------------------------YG-VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGI 124 (414)
Q Consensus 82 ----~--------------------------------~~-~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~ 124 (414)
+ ++ .++++.++.|+|....++...+|+-|... +++-...+|+
T Consensus 199 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tlGisYiDDnvk-~~~SplYlgi 277 (735)
T KOG3626|consen 199 SVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTLGISYIDDNVK-KKNSPLYLGI 277 (735)
T ss_pred cccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccCCCcccccccc-ccCCcHHHHH
Confidence 0 22 56778899999999999999999999998 5899999999
Q ss_pred HHHHHhhhhhhchhhhhHhhhhc-------------------CChhHHHHHHHHHHHHHHHHHHhccCCCCCCC------
Q psy14075 125 ALGGLALGVLIGPPFGGIMYQFV-------------------GKTAPFLILSALALGDGLLQLLLLQPGVVKQE------ 179 (414)
Q Consensus 125 ~~~~~~~g~~ig~~l~~~l~~~~-------------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~------ 179 (414)
......+|.++|-++++++.+.+ .|..-|++.+.+.++..+..++++++.+++++
T Consensus 278 ~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f~fPk~lp~~~~~~~~~~ 357 (735)
T KOG3626|consen 278 LYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLFFFPKELPKSQKRKRARD 357 (735)
T ss_pred HHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHHhCcccCccccccchhhh
Confidence 99999999999999999887532 27777889999999989988888765543211
Q ss_pred -----------CCC-----------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHH
Q psy14075 180 -----------VEP-----------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPA 237 (414)
Q Consensus 180 -----------~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~ 237 (414)
++. ...+++++||.+...++...+....+.++.+++|-|+++++|.++..+..+....
T Consensus 358 ~~~~k~~~~~~~~~~~~~~~ikdfp~s~~~ll~N~if~~~~l~~~~~~~~~~G~~tFlPKyLE~Qfg~sas~An~l~G~i 437 (735)
T KOG3626|consen 358 LHVLKTESGGAKSDKTFGKKIKDFPKSIKRLLSNPIFMLVVLASVIESLAITGYITFLPKYLETQFGISASLANILTGSI 437 (735)
T ss_pred hcccccccccccCCcchhhhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHhhHHHhhHHHHHHHcCCCHHHHHHHhhhh
Confidence 000 1245778999999999999999999999999999999999999999999988665
Q ss_pred HH-HHHhhhhhhhhhhhhhh--hHHHHHHHHHHHH
Q psy14075 238 SI-SYLIGTNLFGPLGHRMG--RYLAALLGLLIIG 269 (414)
Q Consensus 238 ~~-~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~ 269 (414)
++ +..+|.+++|++.+|++ .|....+.++...
T Consensus 438 ~vp~~~~Gi~lGG~iikkfkl~~r~~a~~~~~~~~ 472 (735)
T KOG3626|consen 438 GVPAAAVGIFLGGLIIKKFKLSARGAAKFVIVCSV 472 (735)
T ss_pred hhhhhhhhhhccceeeeeecccHHHHHHHHHHHHH
Confidence 55 45567788999999875 3444433333333
No 120
>PRK10054 putative transporter; Provisional
Probab=99.70 E-value=9.7e-16 Score=144.31 Aligned_cols=175 Identities=14% Similarity=0.185 Sum_probs=142.9
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075 191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI 270 (414)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i 270 (414)
+|.++.+.+..++...+......++|.|+++++|.++.+.|+..+...++.++++++.|+++||+|||+.+..+.++..+
T Consensus 6 ~~~~~~l~~~~~~~~~g~~~~~~~l~~~l~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~k~~~~~~~~~~~~ 85 (395)
T PRK10054 6 RRSTSALLASSLLLTIGRGATLPFMTIYLSRQYSLSVDLIGYAMTIALTIGVVFSLGFGILADKFDKKRYMLLAITAFAS 85 (395)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcchhHHHHHHHHHH
Confidence 34567777778888888888899999999988999999999999999999999999999999999999999999988888
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchH
Q psy14075 271 CLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFE 350 (414)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~ 350 (414)
+.+.+.+.++.+...+...+.+.+.+...+. ..+...|..|+++|+++.|+.+...++|..++|.+.+.+.+ .||+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~l~~-~g~~ 161 (395)
T PRK10054 86 GFIAIPLVNNVTLVVLFFALINCAYSVFSTV---LKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTLLVM-QSIN 161 (395)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-hccC
Confidence 8888888887766655555555544443332 23345677788889999999999999999999999999885 7899
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q psy14075 351 WMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~ 369 (414)
..|.+.+++.++..+...+
T Consensus 162 ~~f~~~~~~~~i~~i~~~~ 180 (395)
T PRK10054 162 LPFWLAAICSAFPLVFIQI 180 (395)
T ss_pred cHHHHHHHHHHHHHHHHHH
Confidence 9999888777776554433
No 121
>KOG2325|consensus
Probab=99.69 E-value=1.7e-15 Score=140.48 Aligned_cols=345 Identities=17% Similarity=0.198 Sum_probs=220.9
Q ss_pred hhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCC-chhHHHHHHHHHHHHHHH-Hh---hh-hHHHHHHHHHHHhhhh
Q psy14075 24 YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGY-SLPMFTGFVIMFLSTLIF-AF---GR-TYGVLFLARSLQGIGS 97 (414)
Q Consensus 24 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Gr-r~~l~~~~~~~~~~~~~~-~~---~~-~~~~l~~~r~l~G~~~ 97 (414)
|.+.+.+..|++.++..++.+++++..|.+..|.+. |+.++.|.++..++.++. ++ .+ ..+.++++|++.|+|.
T Consensus 65 D~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g~llY~~l~~~~~~~~y~mL~~R~l~Gvg~ 144 (488)
T KOG2325|consen 65 DPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIGNLLYLALAYVPNGVKYLMLVARILTGVGV 144 (488)
T ss_pred CCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCcCc
Confidence 478888999999999999999999999999999997 889999999999999988 43 23 6789999999999998
Q ss_pred hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc--C-----------ChhHHHHHHHHHHHHH
Q psy14075 98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV--G-----------KTAPFLILSALALGDG 164 (414)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~--g-----------w~~~f~~~~~~~~~~~ 164 (414)
+..... .+|+++.... ++|.|+++....+..+|..+||.++..+.... | +..+-|+.+++.++..
T Consensus 145 ~n~a~l-R~Y~a~~s~~-~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~Lg~~G~~i~~~~~~n~YTap~w~m~i~~i~~~ 222 (488)
T KOG2325|consen 145 GNFAVL-RAYIADASTV-EDRPRAFAATSGGFVLGIILGPTIQLAFTPLGEKGFMILPGLIFNMYTAPAWLMAILWIIYI 222 (488)
T ss_pred ccHHHH-HHHHHhccCc-cchHHHHHHhhhHHHHHHHHhHHHHHHHhhhcCCceEEcCcceEEecchHHHHHHHHHHHHH
Confidence 876554 7899998874 89999999999999999999998876665321 1 3457788888888877
Q ss_pred HHHHHhccCCCCCCCCC-------CchhhhhccCh-----HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhh
Q psy14075 165 LLQLLLLQPGVVKQEVE-------PPTLKSLVMDP-----YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGV 232 (414)
Q Consensus 165 ~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~ 232 (414)
+......+|..++.+++ .+.-.+..+++ ..+.+.+..+...+.+....+..+......++.+..++-.
T Consensus 223 v~i~~~f~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~vc~~~~~~~~~~~~~iet~~~~~~m~~y~w~~~~av~ 302 (488)
T KOG2325|consen 223 VIILFFFKEVYRGIIDKKKRSVEEEKSDIEKVKKPKLDWVAVLVCIFLRFVVNFIATTIETLSSALTMVMYGWTGSEAVL 302 (488)
T ss_pred HHHHhheeecccCccccccccchhhccchhhhccCChhHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHhccccchHHH
Confidence 77777666654332211 11111222222 1223334444445555555666666666777877766544
Q ss_pred HhH----HHHHHHHhhhhhhhhhh-hhhhhHHHHHHHHHHHHHHHHH--hhhh--h------h----------h------
Q psy14075 233 SFL----PASISYLIGTNLFGPLG-HRMGRYLAALLGLLIIGICLMM--IPLA--R------N----------I------ 281 (414)
Q Consensus 233 ~~~----~~~~~~~~~~~~~g~l~-d~~~~~~~~~~~~~~~~i~~~~--~~~~--~------~----------~------ 281 (414)
..+ +.++..+.-.+...... .++.+|+.+..+.........+ +++. . + .
T Consensus 303 ~~gi~~~~~g~ls~~~~l~~~f~~l~~i~~r~~~~~g~l~~f~~~~i~~yp~~~~s~pv~~~~~~~~~~~~~~y~wc~~~ 382 (488)
T KOG2325|consen 303 YNGITLSISGILSVILLLLYIFTRLGKIDKRRIILLGFLIFFLSYYIFTYPWGFYSGPVQPYNTTYAGCDFEEYSWCDTT 382 (488)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhhhhccceeeeehHHHHHHhhheeeeeccccccccccccccccCcCcccchhhccC
Confidence 333 22222222222222222 2223344444443333222222 2110 0 0 0
Q ss_pred --HHHHHHHHHHHHHHHhhhhh-hhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHH
Q psy14075 282 --NHLIVPNAGLGFAIGMVDSS-MMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAI 358 (414)
Q Consensus 282 --~~~~~~~~~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~ 358 (414)
...+...+..-+..|...|. ..+..+...+...+..++...|.+......+..++|.+........|+++.+.+..+
T Consensus 383 ~~v~~~~~l~~~i~~~g~~~P~~~~~~~tlySkiLgp~~q~~~qg~~~~~~s~~~~~~~~~~t~~~~~~g~~~v~~~~~~ 462 (488)
T KOG2325|consen 383 TAVPLILYLISFIVVFGIAFPFISTALDTLYSKILGPRDQGTMQGVFSISGSIARVVGPIFSTAIFTLSGPRPVWIILLC 462 (488)
T ss_pred cccChhhheeehhheeccccccccchHHHHHHHHhCCccccceeEEEEeccchhhhhhHHHHhhhHHhcCccHHHHHHHH
Confidence 01111122222223333331 122333455666677779999999999999999999999999999999888877766
Q ss_pred HHHHHHHHHHHh
Q psy14075 359 LDFMYAPLLYLL 370 (414)
Q Consensus 359 ~~~~~~~~~~~~ 370 (414)
..++....+...
T Consensus 463 ~~l~~~~l~~~~ 474 (488)
T KOG2325|consen 463 LLLVVAALWIVF 474 (488)
T ss_pred HHHHHHHHHHHH
Confidence 666555544433
No 122
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=99.69 E-value=4.6e-16 Score=139.43 Aligned_cols=171 Identities=17% Similarity=0.187 Sum_probs=146.2
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q psy14075 200 AITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR 279 (414)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 279 (414)
.+....+.-..+..-.|...++ .++|..|.|.+.+...+..-++..+.|.++||.++|+.+..++++.++..+++++.+
T Consensus 37 GYa~fYl~RknF~~a~p~l~e~-~~lsk~~lG~i~s~f~i~YG~sKf~~G~~sDr~npr~fm~~gLilsai~nil~Gfs~ 115 (448)
T COG2271 37 GYAAFYLTRKNFNLAMPALIED-GGLSKTQLGILGSAFSITYGVSKFVMGVLSDRSNPRYFMAFGLILSAIVNILFGFSP 115 (448)
T ss_pred HHHHHHHHHHhHhhccHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHhhhhcccCCCceeehHHHHHHHHHHHHHhhhh
Confidence 3333334334456666765554 689999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHH--HHHHhhhchHHHHHHHH
Q psy14075 280 NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMS--GTLVNTIGFEWMLFIIA 357 (414)
Q Consensus 280 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~--g~l~~~~g~~~~~~~~~ 357 (414)
+.+.+.+...+-|.++|...|...-. +..-+++++||+..++.|+..++|+.+.|++. +++.++.+|+.+|++-+
T Consensus 116 s~~~~~~l~~lng~fQg~Gwpp~~~~---i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~la~~~~~~~w~~~f~~pg 192 (448)
T COG2271 116 SLFLFAVLWVLNGWFQGMGWPPCART---ITHWFSRKERGTWWSIWNTSHNIGGALAPLVALLAFFAFHGGWRAAFYFPG 192 (448)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHH---HHHHcCccccCceEEEehhhhhcccchHHHHHHHHHHHhccchhHHHHHHH
Confidence 99999999999999999997765544 56778899999999999999999999999999 99999999999999999
Q ss_pred HHHHHHHHHHHHhcCCC
Q psy14075 358 ILDFMYAPLLYLLRNPP 374 (414)
Q Consensus 358 ~~~~~~~~~~~~~~~~~ 374 (414)
+++++..++.++..|.+
T Consensus 193 iiaiival~~~~~~rd~ 209 (448)
T COG2271 193 IIAIIVALILLFLLRDR 209 (448)
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 98888777766655443
No 123
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.69 E-value=3.3e-16 Score=124.77 Aligned_cols=138 Identities=43% Similarity=0.745 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCC
Q psy14075 35 MFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD 114 (414)
Q Consensus 35 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 114 (414)
+.+.+.++..+++++.|++.||+|||+.+..+.....++.+...+.++++.+.+.+++.|++.+...+...+++.|.+|
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~- 81 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAALIADIYP- 81 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHHHHHHHCC-
Confidence 3456678889999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075 115 DRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQP 173 (414)
Q Consensus 115 ~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~ 173 (414)
+++|++.+++.+....+|..++|.+.+.+.+..+|++.|++.+...++..+...+..||
T Consensus 82 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (141)
T TIGR00880 82 PEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLLPE 140 (141)
T ss_pred hhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcCCC
Confidence 49999999999999999999999999999998999999999988888777776665543
No 124
>PRK11663 regulatory protein UhpC; Provisional
Probab=99.68 E-value=1.6e-15 Score=144.70 Aligned_cols=168 Identities=16% Similarity=0.175 Sum_probs=138.0
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075 196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~ 275 (414)
...+..++.++....+...+|.+.++ +|.++.+.++..+...++..+++++.|++.||+|||+.+.++.++.+++.++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~ 105 (434)
T PRK11663 27 TMYLGYALFYFTRKSFNAAMPEMLAD-LGLSRSDIGLLATLFYITYGVSKFVSGIVSDRSNARYFMGIGLIATGIINILF 105 (434)
T ss_pred HHHHHHHHHHHhhhhHHHhhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHhhhhHHHhhcCCchhHHHHHHHHHHHHHHH
Confidence 33444444444445667778887766 89999999999999999999999999999999999999999999999998888
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHH
Q psy14075 276 PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFI 355 (414)
Q Consensus 276 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~ 355 (414)
.+.++.+.+.+..++.|++.+...+... ....+.+|+++|+++.++.+....+|..++|.+.+++.+.+||++.|.+
T Consensus 106 ~~~~~~~~l~~~~~l~g~~~g~~~~~~~---~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~gw~~~f~~ 182 (434)
T PRK11663 106 GFSSSLWAFALLWVLNAFFQGWGWPVCA---KLLTAWYSRTERGGWWAIWNTAHNVGGALIPLVVGAIALHYGWRYGMMI 182 (434)
T ss_pred HHHhHHHHHHHHHHHHHHHHHccchHHH---HHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHH
Confidence 8888887777777777888876644333 4466788888999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHH
Q psy14075 356 IAILDFMYAPLL 367 (414)
Q Consensus 356 ~~~~~~~~~~~~ 367 (414)
.++..++..+..
T Consensus 183 ~~i~~~~~~~~~ 194 (434)
T PRK11663 183 AGIIAIVVGLFL 194 (434)
T ss_pred HHHHHHHHHHHH
Confidence 877665544433
No 125
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=99.68 E-value=1.7e-15 Score=145.73 Aligned_cols=183 Identities=13% Similarity=0.142 Sum_probs=148.2
Q ss_pred ccCh-HHHHHHHHHHHHHHHHHhhhhchHHHHHHH--hCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHHH
Q psy14075 189 VMDP-YILIAAGAITFANTGIAMLEPSLPIWMMDT--MGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALLG 264 (414)
Q Consensus 189 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~ 264 (414)
+++| .++.+.+..++..+++++...++|.|+++. +|++..+++...+...++..++.++.|+++|| +|||+++..+
T Consensus 6 ~~~p~~~~~l~~~~~~~~~~~~~~~~~L~~yl~~~~~lg~s~~~ag~~~~~~~~~~~~~~~~~G~laDr~~G~~~~l~~~ 85 (475)
T TIGR00924 6 FGHPKPLFTLFFVELWERFSYYGMQGILAVYLVQQAGLGFSQEQAFIIFGAYSALVYLLTSVGWWFGDRVWGTKKTMVLG 85 (475)
T ss_pred cCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHhhcchHHHHHHH
Confidence 4454 455666667777888899999999999887 89999999999999999999999999999999 8999999999
Q ss_pred HHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075 265 LLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV 344 (414)
Q Consensus 265 ~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 344 (414)
.++.+++.+++.+.++.+.+.+...+.|++.+...+...+..+...+..++++|++++++.+...++|..+||.+.+++.
T Consensus 86 ~~~~~~g~~~~~~~~~~~~~~~~~~l~g~g~g~~~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~l~ 165 (475)
T TIGR00924 86 GIVLMLGHFMLAMSIYPDLIFYGLGTIAVGSGLFKANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGVIA 165 (475)
T ss_pred HHHHHHHHHHHHhcccHhHHHHHHHHHHhccccccCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHHHH
Confidence 99999999888887776666667777888887776665555443333222234788999999999999999999999999
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 345 NTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
++.||+..|...++..+++.+.....+
T Consensus 166 ~~~g~~~~f~~~~~~~~~~~l~~~~~~ 192 (475)
T TIGR00924 166 ENYGYHVGFNLAAVGMVIGLLTFFAGR 192 (475)
T ss_pred HhcChHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999999988776666555544444
No 126
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=99.68 E-value=3.4e-18 Score=164.62 Aligned_cols=329 Identities=18% Similarity=0.164 Sum_probs=3.0
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh---------------
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR--------------- 81 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--------------- 81 (414)
.++.+++.|+++.++.|++.+.+-++..+..++..++.+|..|-|.+-.|.++.+++++++++-+
T Consensus 25 ~lttiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~ 104 (539)
T PF03137_consen 25 SLTTIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSN 104 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCccccccccc
Confidence 46788999999999999999999999999999999999999999999999999999999886511
Q ss_pred -----------------------------------hHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHH
Q psy14075 82 -----------------------------------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIAL 126 (414)
Q Consensus 82 -----------------------------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~ 126 (414)
-+..++++.++.|+|....++...+|+-|..+ +++-+..+|+..
T Consensus 105 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~tLG~tYiDDnv~-~~~splYiGi~~ 183 (539)
T PF03137_consen 105 GNSSISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLYTLGITYIDDNVS-KKNSPLYIGILY 183 (539)
T ss_dssp -----------------------------------------------SSS------------------------------
T ss_pred cccccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCccceeeeeccccc-cccCccchhhhh
Confidence 03467888999999999999999999999999 499999999999
Q ss_pred HHHhhhhhhchhhhhHhhhhc----------------------CChhHHHHHHHHHHHHHHHHHHhccCCCCC-------
Q psy14075 127 GGLALGVLIGPPFGGIMYQFV----------------------GKTAPFLILSALALGDGLLQLLLLQPGVVK------- 177 (414)
Q Consensus 127 ~~~~~g~~ig~~l~~~l~~~~----------------------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~------- 177 (414)
....+|.++|-++++.+.+.+ .|-.-|++.+.+.++..++.+.++++-+..
T Consensus 184 ~~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~~~~~~~~ 263 (539)
T PF03137_consen 184 AMSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGTSERQEEK 263 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCcccccchh
Confidence 999999999999998877421 266677788888888888777776432211
Q ss_pred --C--C-----------CC------------CchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccch
Q psy14075 178 --Q--E-----------VE------------PPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQ 230 (414)
Q Consensus 178 --~--~-----------~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 230 (414)
+ + ++ .+..+++++||.+....+...+......++.+++|.|++.+++.++.++
T Consensus 264 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~df~~~l~~Ll~Np~f~~~~la~~~~~~~~~G~~tF~pKylE~QF~~sas~A 343 (539)
T PF03137_consen 264 ESSERKEEDSDKDSFKDPKSKKSFGKSIKDFPKALKRLLTNPVFMCLILAGVFESFIVSGFATFLPKYLESQFGLSASQA 343 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred hhhhcchhhhhhhcccccccccchhhhhhhHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH
Confidence 0 0 00 0124567889999999999999999999999999999999999999999
Q ss_pred hhHhHHHHH-HHHhhhhhhhhhhhhhh--hHHHHHHHHHHHHHHHHH---hhh--------h----hh------------
Q psy14075 231 GVSFLPASI-SYLIGTNLFGPLGHRMG--RYLAALLGLLIIGICLMM---IPL--------A----RN------------ 280 (414)
Q Consensus 231 g~~~~~~~~-~~~~~~~~~g~l~d~~~--~~~~~~~~~~~~~i~~~~---~~~--------~----~~------------ 280 (414)
+.+.....+ +.++|.+++|++.+|++ .|..+....+...++.+. ..+ + +.
T Consensus 344 ~~l~G~v~ip~~~~G~llGG~ivkk~kl~~~~~~~~~~v~~~v~~~~~~~~~~~~C~~~~~aGv~~~y~~~~~~~~~~~~ 423 (539)
T PF03137_consen 344 SLLTGIVSIPGAALGILLGGYIVKKFKLSARGAAKFCIVVSIVSVILYSPLFFLGCPNPPIAGVTVPYHNSTSSSPSCNL 423 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhhhhcchhheehheEEEEEEEecCcHHHHHHHHHHHHHHHHHHHHHHHeecCCCCceeeecCccccccCCCCCCCC
Confidence 988876555 67778899999999875 344443333333333222 100 0 00
Q ss_pred ------------------------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHH-HHHHHhH
Q psy14075 281 ------------------------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVA-FCLGFAI 335 (414)
Q Consensus 281 ------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~-~~~g~~i 335 (414)
-..+....++..+..........+......+..++++|+.+.|+.... +-+|.+-
T Consensus 424 ~~~Cn~~~~~~~~~a~~G~C~~~C~~~~~~Fl~~~~~~~~~~~~~~~p~~~i~LR~V~~~~rs~AlGv~~~~~rllg~IP 503 (539)
T PF03137_consen 424 TCSCNSCCSSGNGSATPGKCPSDCCNKLIPFLILLFILSFFTFMSQVPSTLITLRCVPPEQRSFALGVQWLIIRLLGFIP 503 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCCCCCccCCCcccccCCCcCcccccccHHHHHHHHHHHHHHHhcccchheeeeccCChhhcchhhhHHHHHHHhhcCcc
Confidence 011222222222222222222334444456778899999999997644 4568899
Q ss_pred HHHHHHHHHhh
Q psy14075 336 GPAMSGTLVNT 346 (414)
Q Consensus 336 g~~~~g~l~~~ 346 (414)
||.++|.+.|.
T Consensus 504 gPIifG~iiD~ 514 (539)
T PF03137_consen 504 GPIIFGAIIDS 514 (539)
T ss_dssp -----------
T ss_pred hHHHHhHHHhh
Confidence 99999999996
No 127
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=99.66 E-value=7.4e-14 Score=123.94 Aligned_cols=235 Identities=17% Similarity=0.195 Sum_probs=170.8
Q ss_pred hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q psy14075 22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSS 101 (414)
Q Consensus 22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 101 (414)
-+++|.+..|++.+....+...++..++.|.++||+|||+.-+.-.++++++++ +-..++++.++++|++.|++.+..+
T Consensus 61 Y~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl-~k~~~~~~~L~~GRvlgGiaTSLLf 139 (354)
T PF05631_consen 61 YESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCL-TKHSSNYPVLLLGRVLGGIATSLLF 139 (354)
T ss_pred HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHH-HHhccccHHHHHHHHHHHHHHHHHH
Confidence 367999999999999999999999999999999999999999999999999886 4566899999999999999999998
Q ss_pred hhHHHHHh-hc----CCCcchhhHHHHHHH-HHHhhhhhhchhhhhHhhhhcCC--hhHHHHHHHHHHHHHHHHHHhccC
Q psy14075 102 VSGMGMLA-ER----YPDDRERGNAMGIAL-GGLALGVLIGPPFGGIMYQFVGK--TAPFLILSALALGDGLLQLLLLQP 173 (414)
Q Consensus 102 ~~~~~~i~-~~----~~~~~~r~~~~~~~~-~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~ 173 (414)
.+--++.. |. +| ++..+..++... ..+++-.+.+.+++..+.+..+. ..+|....++.++..++.....+|
T Consensus 140 S~FEsW~V~Eh~~~g~~-~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~E 218 (354)
T PF05631_consen 140 SAFESWMVHEHNKRGFP-QEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWPE 218 (354)
T ss_pred HHHHHHHHHHHHHcCCC-hHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhcccc
Confidence 88777653 32 23 233444444444 34445556666677777776554 789998888888877776666555
Q ss_pred CCCCCCCCC-------chhhhhccChHHHHHHHHHHHHHHHHHhh-hhchHHHHHHHhCCCccchhhHhHHHHHHHHhhh
Q psy14075 174 GVVKQEVEP-------PTLKSLVMDPYILIAAGAITFANTGIAML-EPSLPIWMMDTMGADKWQQGVSFLPASISYLIGT 245 (414)
Q Consensus 174 ~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~ 245 (414)
+..+.+++. +.++.+.+||+++.+.+...+.-..++.+ ..|.|..- . +.+..-.|++++.+.++.++|+
T Consensus 219 Nyg~~~~~~~~~~~~~~a~~~i~~d~ril~LG~~qslFE~smy~FVflWtPaL~-~--~~~~~P~GlIFssFM~a~MlGS 295 (354)
T PF05631_consen 219 NYGDTSSSSSLSGSFREAWRAILSDPRILLLGLIQSLFEGSMYLFVFLWTPALD-P--DDEELPLGLIFSSFMVAMMLGS 295 (354)
T ss_pred cCCCcccccchHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHheeeeeceec-C--CCCCCCchHHHHHHHHHHHHHH
Confidence 443321111 23456778899988888777776655554 44666643 1 2223457999999999999999
Q ss_pred hhhhhhhh-hhhhHHHH
Q psy14075 246 NLFGPLGH-RMGRYLAA 261 (414)
Q Consensus 246 ~~~g~l~d-~~~~~~~~ 261 (414)
.+..++.. +......+
T Consensus 296 ~lf~~l~s~~~~~e~~l 312 (354)
T PF05631_consen 296 SLFSRLLSKSLRPESLL 312 (354)
T ss_pred HHHHHHHhCCCCHHHHH
Confidence 98876554 43333333
No 128
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=99.66 E-value=1.7e-14 Score=131.02 Aligned_cols=177 Identities=20% Similarity=0.174 Sum_probs=160.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC 271 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~ 271 (414)
...+.+.+..|......+.....+|...+| +|.|..++|...+.++.+..++.++...+.||++||++++..+.++.++
T Consensus 13 ~~l~aLa~~~F~igttEfv~~gLLp~iA~d-l~vs~~~aG~lis~yAl~~ai~ap~l~~lt~r~~Rr~lLl~~l~lFi~~ 91 (394)
T COG2814 13 LALLALALAAFAIGTTEFVPVGLLPPIAAD-LGVSEGAAGQLITAYALGVALGAPLLALLTGRLERRRLLLGLLALFIVS 91 (394)
T ss_pred HHHHHHHHHHHHHHhHHHHHHhchHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHHHHH
Confidence 456677778888888889999999998777 8999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH
Q psy14075 272 LMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW 351 (414)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~ 351 (414)
.++..+++|++.+.+.-++.|+..|..++..... ..+..|+++|+++.++..+...+...+|.+++.++-|.+|||.
T Consensus 92 n~l~alAp~f~~Ll~aR~~~g~a~G~f~~i~~~~---a~~lvpp~~~~~Aiaiv~~G~tlA~v~GvPLGt~ig~~~GWR~ 168 (394)
T COG2814 92 NLLSALAPSFAVLLLARALAGLAHGVFWSIAAAL---AARLVPPGKRGRALALVFTGLTLATVLGVPLGTFLGQLFGWRA 168 (394)
T ss_pred HHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHcCccchhhHHHHHHHHHHHHHHHhccHHHHHHHHhhHHH
Confidence 9999999999999999999999999997765544 6688889999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q psy14075 352 MLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~ 372 (414)
+|...+.+.++..+..+...+
T Consensus 169 ~F~~ia~l~ll~~~~~~~~lP 189 (394)
T COG2814 169 TFLAIAVLALLALLLLWKLLP 189 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhCC
Confidence 999999988888776665444
No 129
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=99.66 E-value=4.3e-15 Score=138.43 Aligned_cols=171 Identities=19% Similarity=0.301 Sum_probs=141.8
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q psy14075 197 AAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP 276 (414)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~ 276 (414)
+....++...+.......+|.|..+ .+.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+...
T Consensus 4 l~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~i~~~~~G~l~dr~g~r~~~~~~~~~~~~~~~~~~ 82 (365)
T TIGR00900 4 LFAAQLISLIGTAITQVALPLYVLA-GTGSASVLSLAALAGMLPYVVLSPIAGALADRYDRKKVMIGADLIRAVLVAVLP 82 (365)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHH-hhccHHHHHHHHHHHHHHHHHHHHhhhHHHHhhchhHHHHHHHHHHHHHHHHHH
Confidence 4455666667777777788888877 688999999999999999999999999999999999999999888888777777
Q ss_pred hhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH
Q psy14075 277 LAR-----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW 351 (414)
Q Consensus 277 ~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~ 351 (414)
+.+ +.+.+.+..++.|++.+...+...+ ...|..|+++|++++++.+....+|..++|.+.+.+.+..||++
T Consensus 83 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~g~~~ 159 (365)
T TIGR00900 83 FVALLGGLNIWQVYVLAGILAIAQAFFTPAYQA---MLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGGLMYATLGIKW 159 (365)
T ss_pred HHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHH---HHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhhHHH
Confidence 666 7777788888888888877554443 46678888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q psy14075 352 MLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~ 371 (414)
.|++.++..++..+.....+
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~ 179 (365)
T TIGR00900 160 AIWVDAVGFAISALLIVSVR 179 (365)
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 99887776666555544443
No 130
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=99.65 E-value=6.4e-15 Score=136.64 Aligned_cols=169 Identities=25% Similarity=0.477 Sum_probs=139.5
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q psy14075 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA 278 (414)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~ 278 (414)
+..++...........+|.++.+++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.+...+.
T Consensus 3 l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~ 82 (352)
T PF07690_consen 3 LAFFLSGFGFSIISPALPLYLAEELGLSPSQIGLLFSAFFLGSALFSPFAGYLSDRFGRRRVLIIGLLLFALGSLLLAFA 82 (352)
T ss_dssp HHHHHHHHHHHHHHHHHH-HHHCCSTTTSHCHHHHHHHHHHHHHHHHHHHHHHHHHS-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeeEeehhhhhhhHHHHhhhh
Confidence 44555566666677777856777789999999999999999999999999999999999999999999999885555555
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHH
Q psy14075 279 RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAI 358 (414)
Q Consensus 279 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~ 358 (414)
++.+.+.+..++.|++.+...+.... ...+..|+++|++++++.+....+|..++|.+.+.+.+..||++.|++.++
T Consensus 83 ~~~~~~~~~~~l~g~~~~~~~~~~~~---~i~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~~~~~~~~~~~~ 159 (352)
T PF07690_consen 83 SNFWLLLIARFLLGIGSGFFSPASNA---LIADWFPPEERGRAFGILSAGFSLGSILGPLLGGFLISYFGWRWAFLISAI 159 (352)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHH---HHHHCCCTCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCHCHHCCHHHHHHH
T ss_pred hhHHHHhhhccccccccccccccccc---cccccchhhhhhhccccccchhhhhhhcccchhhhhhhccccccccccccc
Confidence 66667788888999998877655544 466888888999999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHh
Q psy14075 359 LDFMYAPLLYLL 370 (414)
Q Consensus 359 ~~~~~~~~~~~~ 370 (414)
..++..++....
T Consensus 160 ~~~~~~il~~~~ 171 (352)
T PF07690_consen 160 LSLIAAILFILF 171 (352)
T ss_dssp HHHHHHHHHHCC
T ss_pred hhhhhhhhHhhh
Confidence 888877643333
No 131
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=99.65 E-value=1.7e-14 Score=136.10 Aligned_cols=171 Identities=14% Similarity=0.127 Sum_probs=143.9
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q psy14075 195 LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~ 274 (414)
+......++...+.+....++|.|++++.|.|+.+.|+..+...+...+.+++.|+++||++||+.+..+..+..++.+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~gl~~~~~~l~~~~~~~~~G~l~dr~g~k~~l~~~~~~~~~~~~~ 92 (400)
T PRK11646 13 YFLLIDNMLVVLGFFVVFPLISIRFVDQLGWAAVMVGIALGLRQFIQQGLGIFGGAIADRFGAKPMIVTGMLMRAAGFAT 92 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhhhHHHHHhCchHHHHHHHHHHHHHHHH
Confidence 44456677777778888889999998889999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHH
Q psy14075 275 IPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLF 354 (414)
Q Consensus 275 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~ 354 (414)
+...++.+.+.+..++.|++.+...+... +...+..|+++|+++.|+.+...++|..+||.+.|.+. ..||++.|+
T Consensus 93 ~~~~~~~~~l~~~~~l~g~~~~~~~~~~~---~~~~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~g~l~-~~g~~~~f~ 168 (400)
T PRK11646 93 MAIAHEPWLLWLSCILSGLGGTLFDPPRT---ALVIKLIRPHQRGRFFSLLMMQDSAGAVIGALLGSWLL-QYDFRLVCA 168 (400)
T ss_pred HHHhccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhHHHHHH
Confidence 88888877777778888887776654443 33567778889999999999999999999999999998 679999999
Q ss_pred HHHHHHHHHHHHHHH
Q psy14075 355 IIAILDFMYAPLLYL 369 (414)
Q Consensus 355 ~~~~~~~~~~~~~~~ 369 (414)
+.++..++..++...
T Consensus 169 ~~~~~~~~~~i~~~~ 183 (400)
T PRK11646 169 TGAVLFVLAAAFNAW 183 (400)
T ss_pred HHHHHHHHHHHHHHH
Confidence 887776665544333
No 132
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=99.63 E-value=1.4e-14 Score=136.27 Aligned_cols=171 Identities=20% Similarity=0.342 Sum_probs=140.7
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075 196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~ 275 (414)
...................+|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+.+..+..+..++.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~ 87 (385)
T TIGR00710 9 LLGCLSILGPLGIDMYLPAFPEIAAD-LSTPASIVQMTLTLYLLGFAAGQLLWGPLSDRYGRRPVLLLGLFIFALSSLGL 87 (385)
T ss_pred HHHHHHHHHHHHHHHhcccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 33334444455666666777776554 89999999999999999999999999999999999999999999999988888
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHH
Q psy14075 276 PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFI 355 (414)
Q Consensus 276 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~ 355 (414)
...++.+...+..++.|++.+...+.... ...|..|+++|+++.++.+....+|..++|.+.+.+.+..||+..|.+
T Consensus 88 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~~~~~~~~ 164 (385)
T TIGR00710 88 ALSNNIETLLVLRFVQAFGASAGSVISQA---LVRDIYPGEELSRIYSILMPVLALAPAVAPLLGGYILVWLSWHAIFAF 164 (385)
T ss_pred HHHccHHHHHHHHHHHHcchhHHHHHHHH---HHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHHHH
Confidence 88888888888888888888777554443 466778889999999999999999999999999999999999999988
Q ss_pred HHHHHHHHHHHHHHh
Q psy14075 356 IAILDFMYAPLLYLL 370 (414)
Q Consensus 356 ~~~~~~~~~~~~~~~ 370 (414)
.++..++..+.....
T Consensus 165 ~~~~~~~~~~~~~~~ 179 (385)
T TIGR00710 165 LSLAGILLSALIFFI 179 (385)
T ss_pred HHHHHHHHHHHHHHh
Confidence 877777666555443
No 133
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=99.63 E-value=1.2e-14 Score=137.84 Aligned_cols=162 Identities=18% Similarity=0.245 Sum_probs=136.7
Q ss_pred hhhhhhhcCCc--------chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh----hHHHH
Q psy14075 19 ENRHKYLMGET--------KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR----TYGVL 86 (414)
Q Consensus 19 ~~~~~~~g~s~--------~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~----~~~~l 86 (414)
|.+.++.|.++ ++.+...+...++..++.++.|+++||+|||+++..+.++.+++..+..... +++.+
T Consensus 232 ~~~~~~~g~~~~~~~~~~~~~~g~~~~~~~i~~i~~~~~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~~~~~~~~~~~~l 311 (418)
T TIGR00889 232 NGFLHEFGRNPEFADSFVVKNASIWMSLSQFSEIFFILTIPFFLKRFGIKKVMLLSLVAWALRFGFFAYGDPEYFGYALL 311 (418)
T ss_pred HHHHHHhcccccccchhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCcchhhHHHH
Confidence 34455666443 5679999999999999999999999999999999999999998877776632 34667
Q ss_pred HHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHH-HHHhhhhhhchhhhhHhhhh------cCChhHHHHHHHH
Q psy14075 87 FLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIAL-GGLALGVLIGPPFGGIMYQF------VGKTAPFLILSAL 159 (414)
Q Consensus 87 ~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~l~~~l~~~------~gw~~~f~~~~~~ 159 (414)
++.+++.|++.+...+....++.|++| +++|++++|+.+ ...++|..+||+++|.+.++ +||+..|.+.+++
T Consensus 312 ~l~~~l~g~~~~~~~~~~~~~i~~~~p-~~~~g~~~g~~~~~~~~lg~~iGp~l~G~l~~~~g~~~~~~~~~~f~~~~~~ 390 (418)
T TIGR00889 312 FLSMIVYGCAFDFFNISGSVFVEKEVP-VHIRASAQGLFTLMCNGFGSLLGYILSGVMVEKMFAYGTFDWQTMWLFFAGY 390 (418)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCC-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhccccCCchHHHHHHHHHH
Confidence 788999999999988998899999999 499999999997 67899999999999999987 4699999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCC
Q psy14075 160 ALGDGLLQLLLLQPGVVKQEVE 181 (414)
Q Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~ 181 (414)
.++..++.+++.+|++++.|.+
T Consensus 391 ~~i~~~l~~~~~~~~~~~~~~~ 412 (418)
T TIGR00889 391 IAILAVLFMIFFKYSHNAIKVD 412 (418)
T ss_pred HHHHHHHHHHHhCCcccCCCCc
Confidence 8888888888887765554443
No 134
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=99.63 E-value=4.4e-14 Score=133.04 Aligned_cols=153 Identities=13% Similarity=0.160 Sum_probs=131.2
Q ss_pred hhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHH
Q psy14075 210 MLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNA 289 (414)
Q Consensus 210 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 289 (414)
.....+|.+.++ +|.++.+.++..+...++..+++++.|++.||+|||+.+..+.++.+++.+...+.++.+.+++..+
T Consensus 38 ~~~~~l~~~~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~ 116 (394)
T PRK10213 38 LPVSLLTPMAQD-LGISEGVAGQSVTVTAFVAMFASLFITQTIQATDRRYVVILFAVLLTLSCLLVSFANSFSLLLIGRA 116 (394)
T ss_pred HHHhhHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcHHHHHHHHHHHHHHHHHHHHHChHHHHHHHHH
Confidence 444467776554 8999999999999999999999999999999999999999999999998888888888888888889
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075 290 GLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366 (414)
Q Consensus 290 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 366 (414)
+.|++.+...+..... ..|..|+++|+++.++.....++|..++|.+.+.+.+.+||++.|++.+.+.++..+.
T Consensus 117 l~G~~~g~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~l~~~~~l~ 190 (394)
T PRK10213 117 CLGLALGGFWAMSASL---TMRLVPPRTVPKALSVIFGAVSIALVIAAPLGSFLGELIGWRNVFNAAAVMGVLCIFW 190 (394)
T ss_pred HHHHhhHHHHHHHHHH---HHHHcCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHH
Confidence 9999988876654443 5677888999999999999999999999999999999999999999887666554433
No 135
>PRK03545 putative arabinose transporter; Provisional
Probab=99.63 E-value=3.1e-14 Score=134.17 Aligned_cols=172 Identities=13% Similarity=0.075 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~ 273 (414)
++.+.+..+............+|.+.+ ++|.++.+.++..+...++..++.+..|++.||+|||+.+..+..+..++.+
T Consensus 11 ~~~l~~~~~~~~~~~~~~~~~~~~l~~-~~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 89 (390)
T PRK03545 11 VVTLALAAFIFNTTEFVPVGLLSDIAQ-SFHMQTAQVGLMLTIYAWVVALMSLPLMLLTSNVERRKLLIGLFVLFIASHV 89 (390)
T ss_pred HHHHHHHHHHHHhHHHHHHcchHHHHh-HcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence 333334333333333334445676544 5899999999999999999999999999999999999999999999999988
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075 274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWML 353 (414)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~ 353 (414)
...+.++.+.+.+..++.|++.+...+... +...+..|+++|+++.|+......+|..++|++.+.+.+..||++.|
T Consensus 90 ~~~~~~~~~~l~~~r~~~G~~~~~~~~~~~---~~i~~~~~~~~r~~~~g~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f 166 (390)
T PRK03545 90 LSALAWNFTVLLISRIGIAFAHAIFWSITA---SLAIRVAPAGKKAQALSLLATGTALAMVLGLPLGRVIGQYLGWRTTF 166 (390)
T ss_pred HHHHhccHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhCChhhhhhHHHHHHHHHHHHHHHHhhHHHHHHHHhcHHHHH
Confidence 888888888888887888877776644333 34567778899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy14075 354 FIIAILDFMYAPLLYL 369 (414)
Q Consensus 354 ~~~~~~~~~~~~~~~~ 369 (414)
++.+++.++..+....
T Consensus 167 ~~~~~~~~l~~~~~~~ 182 (390)
T PRK03545 167 LAIGGGALITLLLLIK 182 (390)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9988877666554444
No 136
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=99.63 E-value=2.5e-14 Score=138.43 Aligned_cols=181 Identities=10% Similarity=0.131 Sum_probs=139.0
Q ss_pred hhhccCh-HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHH
Q psy14075 186 KSLVMDP-YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALL 263 (414)
Q Consensus 186 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~ 263 (414)
.+.+|+| .++..++..++..++++....+++.|+++++|++..+++..............++.|+++|| +|||+.+..
T Consensus 14 ~~~~~~p~~~~~~~~~~~~~~~~~y~~~~~l~~yl~~~lg~s~~~a~~~~~~~~~~~~~~~~~~G~LaDr~~G~r~~~~~ 93 (500)
T PRK09584 14 LNAFKQPKAFYLIFSIELWERFGYYGLQGIMAVYLVKQLGMSEADSITLFSSFSALVYGLVAIGGWLGDKVLGTKRVIML 93 (500)
T ss_pred hhhhcCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHH
Confidence 4555776 47788888888889999999999999999999999888877776665555556789999999 599999999
Q ss_pred HHHHHHHHHHHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc--chhhHHhHHHHHHHHHHhHHHHHH
Q psy14075 264 GLLIIGICLMMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA--VYGSVYAIGDVAFCLGFAIGPAMS 340 (414)
Q Consensus 264 ~~~~~~i~~~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~ig~~~~ 340 (414)
+.++..++..++.+.+ +.+.+.+...+.|++.|...+...+. ..+.+|++ .+..+.++.+...++|..++|.+.
T Consensus 94 g~~~~~ig~~l~~~~~~~~~~l~~~~~l~gig~g~~~~~~~~l---~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~ 170 (500)
T PRK09584 94 GAIVLAIGYALVAWSGHDAGIVYMGMATIAVGNGLFKANPSSL---LSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLAT 170 (500)
T ss_pred HHHHHHHHHHHHHHhcccHHHHHHHHHHHHHhhhcccCCHHHH---HHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHH
Confidence 9999998887777754 33444455667778777765544443 44555433 345678888999999999999999
Q ss_pred HHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy14075 341 GTLVNTIGFEWMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 341 g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (414)
|++.+..||++.|.+.++..+++.+....
T Consensus 171 g~l~~~~g~~~~F~i~~i~~~i~~i~~~~ 199 (500)
T PRK09584 171 PWLAAKYGWSVAFALSVVGMLITVVNFAF 199 (500)
T ss_pred HHHHHhhCHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999887665665544433
No 137
>TIGR00895 2A0115 benzoate transport.
Probab=99.63 E-value=5.2e-15 Score=139.64 Aligned_cols=163 Identities=21% Similarity=0.377 Sum_probs=131.6
Q ss_pred HHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q psy14075 202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNI 281 (414)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 281 (414)
+.............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.++....++.
T Consensus 27 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 105 (398)
T TIGR00895 27 LMDGYDLAAMGFAAPAISAE-WGLDPVQLGFLFSAGLIGMAFGALFFGPLADRIGRKRVLLWSILLFSVFTLLCALATNV 105 (398)
T ss_pred HHHHHHHHHHHhhHHHHhhc-cCCCHHHHHHHHHHHHHHHHHHHHHhHHHHHHhhhHHHHHHHHHHHHHHHHHHHHccch
Confidence 33334444555566665544 89999999999999999999999999999999999999999999888888888888887
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHH
Q psy14075 282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDF 361 (414)
Q Consensus 282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~ 361 (414)
+...+..++.|++.+...+... +...|..|+++|+++.++.+....+|..++|.+.+.+.+..||+..+.+.+++..
T Consensus 106 ~~~~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~g~~~~~~~~~~~~~ 182 (398)
T TIGR00895 106 TQLLILRFLAGLGLGGLMPNLN---ALVSEYAPKRFRGTAVGLMFCGYPIGAAVGGFLAGWLIPVFGWRSLFYVGGIAPL 182 (398)
T ss_pred HHHHHHHHHHhcccccchhhHH---HHHHHHcCHHhhchhHhhHhhHHHHHHHHHHHHHHHHhhcccceeehhhhhhHHH
Confidence 7777778888888776655444 3466778888999999999999999999999999999999999999988765555
Q ss_pred HHHHHHH
Q psy14075 362 MYAPLLY 368 (414)
Q Consensus 362 ~~~~~~~ 368 (414)
+..++..
T Consensus 183 ~~~~~~~ 189 (398)
T TIGR00895 183 LLLLLLM 189 (398)
T ss_pred HHHHHHH
Confidence 5444433
No 138
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=99.63 E-value=2.4e-14 Score=135.94 Aligned_cols=178 Identities=13% Similarity=0.103 Sum_probs=138.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh-hhHHHHHHHHHHHH
Q psy14075 191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM-GRYLAALLGLLIIG 269 (414)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~ 269 (414)
.+.++......+...+.++++..++|.|+++.+|+++.+++.....+.....++.+++|+++||+ |||+.+.++.++..
T Consensus 8 p~~l~~l~~~~~~e~fs~Yg~~~~L~~yL~~~lgls~~~a~~i~~~~~~~~~l~~ligG~LaDRilGrrr~iliG~il~~ 87 (493)
T PRK15462 8 PRAIYYVVALQIWEYFSFYGMRALLILYLTNQLKYDDNHAYELFSAYCSLVYVTPILGGFLADKVLGNRMAVMLGALLMA 87 (493)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHH
Confidence 34566667777777888899999999999998999999999999999999999999999999999 99999999999999
Q ss_pred HHHHHhhhhhh-hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc--chhhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075 270 ICLMMIPLARN-INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA--VYGSVYAIGDVAFCLGFAIGPAMSGTLVNT 346 (414)
Q Consensus 270 i~~~~~~~~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~ 346 (414)
++.+++...++ .....+...+..++.|...+...+ ...|.+|++ +|.+++++.+...++|+.++|.+.|++.+.
T Consensus 88 lg~lll~~~~~~~~~~~l~l~li~iG~G~~~~~~~a---lv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L~~~ 164 (493)
T PRK15462 88 IGHVVLGASEIHPSFLYLSLAIIVCGYGLFKSNVSC---LLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYAQEE 164 (493)
T ss_pred HHHHHHHHhhcchhHHHHHHHHHHHhcccccccHHH---HHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHHHhh
Confidence 88776654321 122333333444555555443333 356767654 688999999999999999999999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 347 IGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
.||+..|...++..+++.+..+..+
T Consensus 165 ~Gw~~~F~iaaigm~l~li~~~~~~ 189 (493)
T PRK15462 165 YSWAMGFGLAAVGMIAGLVIFLCGN 189 (493)
T ss_pred hChHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999987776666655554433
No 139
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=99.62 E-value=4.8e-14 Score=133.46 Aligned_cols=169 Identities=15% Similarity=0.185 Sum_probs=137.5
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~ 273 (414)
+....+..+...+.........|.+ ++++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+.+++.+
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~~~l-~~~~~~s~~~~g~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~~~~~~~~~~~~~~ 92 (405)
T TIGR00891 14 FSAAWLGWLLDAFDFFLVALVLAEV-AGEFGLTTVDAASLISAALISRWFGALMFGLWGDRYGRRLPMVTSIVLFSAGTL 92 (405)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHH
Confidence 3444555555566666666667765 455899999999999999999999999999999999999999999999988888
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc--hHH
Q psy14075 274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG--FEW 351 (414)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--~~~ 351 (414)
...+.++.+.+....++.|++.+...+... ....|..|+++|+++.++.+....+|..+++.+.+.+.+..+ |++
T Consensus 93 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~l~~~~~~~w~~ 169 (405)
T TIGR00891 93 ACGFAPGYITMFIARLVIGIGMGGEYGSSA---AYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYSLVVPVWGDGWRA 169 (405)
T ss_pred HHHHhccHHHHHHHHHHHHhhhhhhhHHHH---HHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH
Confidence 888888888888888888988887755443 346688888999999999999999999999999999988776 999
Q ss_pred HHHHHHHHHHHHHHH
Q psy14075 352 MLFIIAILDFMYAPL 366 (414)
Q Consensus 352 ~~~~~~~~~~~~~~~ 366 (414)
.|.+.++..++....
T Consensus 170 ~f~~~~~~~~~~~~~ 184 (405)
T TIGR00891 170 LFFISILPIIFALWL 184 (405)
T ss_pred HHHHHHHHHHHHHHH
Confidence 888765555544433
No 140
>PRK10504 putative transporter; Provisional
Probab=99.61 E-value=4.1e-14 Score=136.81 Aligned_cols=176 Identities=15% Similarity=0.211 Sum_probs=147.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC 271 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~ 271 (414)
+.++...+..++.......+..++|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~ 88 (471)
T PRK10504 10 WQLWIVAFGFFMQSLDTTIVNTALPSMAQS-LGESPLHMHMVIVSYVLTVAVMLPASGWLADRVGVRNIFFTAIVLFTLG 88 (471)
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHH
Confidence 456777777777777778888899998876 8999999999999999999999999999999999999999888888888
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH
Q psy14075 272 LMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW 351 (414)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~ 351 (414)
.+...+.++.+.+++..++.|++.+...+.... ...+..|+++|+++.|+.+....+|..++|.+.|.+.+..||++
T Consensus 89 ~~~~~~~~~~~~l~~~~~l~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~g~l~~~~gw~~ 165 (471)
T PRK10504 89 SLFCALSGTLNELLLARVLQGVGGAMMVPVGRL---TVMKIVPREQYMAAMTFVTLPGQVGPLLGPALGGLLVEYASWHW 165 (471)
T ss_pred HHHHHHhCCHHHHHHHHHHHHhhhHHHHHHHHH---HHHHHcCHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhhccHHH
Confidence 777777777777788888899988887554433 35677888899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHhc
Q psy14075 352 MLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~ 371 (414)
.|.+...+..+..+......
T Consensus 166 ~f~~~~~~~~l~~~~~~~~~ 185 (471)
T PRK10504 166 IFLINIPVGIIGAIATLMLM 185 (471)
T ss_pred HHHHHHHHHHHHHHHHHHhC
Confidence 99988777666655554443
No 141
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=99.61 E-value=2.9e-14 Score=135.10 Aligned_cols=171 Identities=13% Similarity=0.085 Sum_probs=138.6
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075 196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI 275 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~ 275 (414)
...+.+.+............| .+++++|.+..+.++..+...++..++.+..|++.||+|||+.+..+.++.+++.+..
T Consensus 12 ~~~~~~~~~~~d~~~~~~~~~-~l~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~G~r~~~~~~~~~~~~~~~~~ 90 (412)
T TIGR02332 12 FLFILFIFSFLDRINIGFAGL-TMGKDLGLSATMFGLAATLFYAAYVICGIPSNIMLAIIGARRWIAGIMVLWGIASTAT 90 (412)
T ss_pred HHHHHHHHHHhhhhhHHHHHH-hhHhhcCCCHHHHHHHHHHHHHHHHHHHhhHHHHHHHhChHHHHHHHHHHHHHHHHHH
Confidence 334444444444555555556 5667799999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh------hhch
Q psy14075 276 PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN------TIGF 349 (414)
Q Consensus 276 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~------~~g~ 349 (414)
.+.++.+.+.+.-++.|++.+...+... ....|.+|+++|+++.++.+....+|..+++.+.+++.+ ..||
T Consensus 91 ~~~~~~~~l~~~r~l~G~~~~~~~~~~~---~~~~~~~~~~~rg~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~gw 167 (412)
T TIGR02332 91 MFATGPESLYLLRILVGIAEAGFLPGIL---LYLTFWFPAYFRARANALFMIAMPVTMALGLILSGYILALDGLMALKGW 167 (412)
T ss_pred HHhcCHHHHHHHHHHHHHHHhhHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCccch
Confidence 8888888888888899999887754333 346788889999999999999999999999999998874 3689
Q ss_pred HHHHHHHHHHHHHHHHHHHHh
Q psy14075 350 EWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~ 370 (414)
++.|.+.++..++..++.+++
T Consensus 168 r~~f~~~~~~~l~~~~~~~~~ 188 (412)
T TIGR02332 168 QWLFLLEGFPSVILGVMTWFW 188 (412)
T ss_pred hHHHHHHHHHHHHHHHHHhhc
Confidence 999999877766655444433
No 142
>PRK10489 enterobactin exporter EntS; Provisional
Probab=99.61 E-value=6.4e-15 Score=140.06 Aligned_cols=185 Identities=21% Similarity=0.194 Sum_probs=144.4
Q ss_pred hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHH
Q psy14075 184 TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALL 263 (414)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 263 (414)
+++.+.|+|.++......++..+........+|.+.++ .+.++.+.|+..+...++..+++++.|+++||++||+.+..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~l~~~~~~~~~G~l~dr~g~~~~l~~ 87 (417)
T PRK10489 9 DLSLLKTHPAFRAVFIARFISIFGLGLLGVAVPVQIQM-MTGSTLQVGLSVTLTGGAMFIGLMVGGVLADRYDRKKLILL 87 (417)
T ss_pred HHHHHHhCCChhhHHHHHHHHHHHHHHHHHHHHHHHHH-HHCCHHHHHHHHHHHHHHHHHHHHhhHHHhhhcCCceEEEe
Confidence 45556678888877777778888878888888988776 57799999999999999999999999999999999998888
Q ss_pred HHHHHHHHHHHhhh-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHH
Q psy14075 264 GLLIIGICLMMIPL-----ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPA 338 (414)
Q Consensus 264 ~~~~~~i~~~~~~~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~ 338 (414)
+..+.+++.+.+.. .++.+.+.+..++.|++.+...+... ....+..|+++++++.++.+...++|..+||.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~ 164 (417)
T PRK10489 88 ARGTCGLGFIGLALNAFLPEPSLLAIYLLGLWDGFFGSLGVTALL---AATPALVGRENLMQAGAITMLTVRLGSVISPA 164 (417)
T ss_pred hHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHh---hhhhhccCHHHHHHHHHHHHHHHhHHHHhHHH
Confidence 77776666554432 33455555666677777666544333 33557777888999999999999999999999
Q ss_pred HHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 339 MSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 339 ~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
+.|.+.+..||++.|.+.++..++..+..+..++
T Consensus 165 l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 198 (417)
T PRK10489 165 LGGLLIAAGGVAWNYGLAAAGTFITLLPLLRLPA 198 (417)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999999999998877776666555544443
No 143
>PRK10091 MFS transport protein AraJ; Provisional
Probab=99.61 E-value=4.8e-14 Score=132.39 Aligned_cols=173 Identities=14% Similarity=0.092 Sum_probs=144.7
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC 271 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~ 271 (414)
+.++...+..+............+|.+.++ +|.+..+.++..+...++..+++++.|++.||+|||+.+..+..+.+++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~ 81 (382)
T PRK10091 3 KVILSLALGTFGLGMAEFGIMGVLTELAHD-VGISIPAAGHMISYYALGVVVGAPIIALFSSRYSLKHILLFLVALCVIG 81 (382)
T ss_pred chHHHHHHHHHHHHhhHHHHHhChHHHHHH-cCCCHHHHhHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHH
Confidence 445666666666677777777888886554 8999999999999999999999999999999999999999999999999
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH
Q psy14075 272 LMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW 351 (414)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~ 351 (414)
.++..+.++.+.+.+..++.|++.+...+.... ...+..|+++|+++.+.......++..++|.+.+.+.+..||++
T Consensus 82 ~~l~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~~l~~~~gwr~ 158 (382)
T PRK10091 82 NAMFTLSSSYLMLAIGRLVSGFPHGAFFGVGAI---VLSKIIKPGKVTAAVAGMVSGMTVANLLGIPLGTYLSQEFSWRY 158 (382)
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhhHHHHHHHHH---HHHHhCChHHhhHHHHHHHHHHHHHHHHhccHHHHHhhhccHHH
Confidence 999989999988888888999988876554333 34566777888999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy14075 352 MLFIIAILDFMYAPLLY 368 (414)
Q Consensus 352 ~~~~~~~~~~~~~~~~~ 368 (414)
.|.+.++..++..+..+
T Consensus 159 ~f~~~~~~~~~~~~~~~ 175 (382)
T PRK10091 159 TFLLIAVFNIAVLASIY 175 (382)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99998877666554433
No 144
>TIGR00893 2A0114 d-galactonate transporter.
Probab=99.61 E-value=1e-14 Score=137.38 Aligned_cols=159 Identities=20% Similarity=0.234 Sum_probs=134.4
Q ss_pred HhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy14075 209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPN 288 (414)
Q Consensus 209 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 288 (414)
..+....|. +++++|.++.+.++..+...++..++.++.|++.||+|||+.+..+..+..++.+...+.++.+.+.+..
T Consensus 11 ~~~~~~~~~-~~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (399)
T TIGR00893 11 ANLSFAAPM-LQEDLGLSAAQYGYVFSAFSWGYVVGQFPGGWLLDRFGARKTLAVFIVIWGVFTGLQAFAGAYVSLYILR 89 (399)
T ss_pred HhhhHhHHH-HHHhhCCChhhHHHHHHHHHHHHHHHHHhHHHHHHhcCcceeeHHHHHHHHHHHHHHHHHcCHHHHHHHH
Confidence 344444555 5566899999999999999999999999999999999999999999999988888888888888888888
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHH
Q psy14075 289 AGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~ 368 (414)
++.|++.+...+... ....|..|+++|++++++.+....+|..++|.+.+.+.+..+|++.|.+.++..++..+...
T Consensus 90 ~l~g~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (399)
T TIGR00893 90 VLLGAAEAPFFPGII---LIVASWFPASERATAVSIFNSAQGLGGIIGGPLVGWILIHFSWQWAFIIEGVLGIIWGVLWL 166 (399)
T ss_pred HHHHHHHHhhhhHHH---HHHHHhCCHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHhh
Confidence 899999887755444 34668888899999999999999999999999999999999999999988877776665554
Q ss_pred Hhc
Q psy14075 369 LLR 371 (414)
Q Consensus 369 ~~~ 371 (414)
...
T Consensus 167 ~~~ 169 (399)
T TIGR00893 167 KFI 169 (399)
T ss_pred hee
Confidence 443
No 145
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=99.60 E-value=6e-14 Score=132.65 Aligned_cols=170 Identities=16% Similarity=0.183 Sum_probs=136.5
Q ss_pred ccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHH
Q psy14075 189 VMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLII 268 (414)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 268 (414)
..++++....+..++...........+|.++++++|.|+.+.|+..+...++..+++++.|+++||+|||+++..+..+.
T Consensus 12 ~~~~~~~~l~~~~~~~~~~~~~~~~~l~~~i~~~~g~s~~~~g~~~~~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~ 91 (399)
T PRK05122 12 RLTLRIVSIVMFTFISYLTIGLPLAVLPGYVHDQLGFSAFLAGLVISLQYLATLLSRPHAGRYADTLGPKKAVVFGLCGC 91 (399)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHHHHHHHHHHHHHHHHhchhhHhHHhccCCcchHHHHHHHH
Confidence 34567777888888888888888889999988889999999999999999999999999999999999999999988877
Q ss_pred HHHHHHhhhh---h-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHH
Q psy14075 269 GICLMMIPLA---R-----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMS 340 (414)
Q Consensus 269 ~i~~~~~~~~---~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~ 340 (414)
+++.+..... + +.+.+++..++.|++.+...+... ....+..|+++|+++.++......+|..+||.+.
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 168 (399)
T PRK05122 92 ALSGLLYLLAGLLAAWPVLSLLLLLLGRLLLGIGESLAGTGSI---LWGIGRVGALHTGRVISWNGIATYGALAIGAPLG 168 (399)
T ss_pred HHHHHHHHHhhhhhccchhHHHHHHHHHHHHHhhHHhhcchHH---HHHHhhcChhhhccchhhhhhhhhHHHHHHHHHH
Confidence 7654443322 2 233455666778888776644433 3355777888999999998888899999999999
Q ss_pred HHHHhhhchHHHHHHHHHHHH
Q psy14075 341 GTLVNTIGFEWMLFIIAILDF 361 (414)
Q Consensus 341 g~l~~~~g~~~~~~~~~~~~~ 361 (414)
+.+.+..||+..+.+..+..+
T Consensus 169 ~~l~~~~g~~~~~~~~~~~~~ 189 (399)
T PRK05122 169 VLLYHWGGLAGLGLLIMLLAL 189 (399)
T ss_pred HHHHHcccHHHHHHHHHHHHH
Confidence 999999999988776655443
No 146
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=99.60 E-value=1.2e-13 Score=131.03 Aligned_cols=176 Identities=21% Similarity=0.314 Sum_probs=140.2
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc-----hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHH
Q psy14075 191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ-----QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGL 265 (414)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-----~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 265 (414)
++.+....+..++..........++|.+.++ +|.+..+ .+...+...+...++.++.|+++||++||+.+..+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~ 91 (408)
T PRK09874 13 KRNLTVAWLGCFLTGAAFSLVMPFLPLYVEQ-LGVTGHSALNMWSGLVFSITFLFSAIASPFWGGLADRKGRKIMLLRSA 91 (408)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHHH-hCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhCcHHHHHHHH
Confidence 3445556666777777777888899998876 7888654 378888899999999999999999999999999998
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh
Q psy14075 266 LIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN 345 (414)
Q Consensus 266 ~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~ 345 (414)
.+..++.+.+...++.+.+.+..++.|++.+.. + .......+..|+++|+++.++.+....+|..++|.+.+.+.+
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~ 167 (408)
T PRK09874 92 LGMGIVMVLMGLAQNIWQFLILRALLGLLGGFV-P---NANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGGLLAD 167 (408)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHHHHHHhhhhH-H---hHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 888888887777778777777777777764432 2 222345677888899999999999999999999999999999
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 346 TIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
..+|+..|.+.+++.++..+......
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~~~~~~ 193 (408)
T PRK09874 168 SYGLRPVFFITASVLFLCFLVTLFCI 193 (408)
T ss_pred HhCHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999988877776665554443
No 147
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=99.60 E-value=8e-14 Score=130.14 Aligned_cols=167 Identities=13% Similarity=0.158 Sum_probs=133.3
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q psy14075 193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICL 272 (414)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~ 272 (414)
.++..++..+...........+.|.++++++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++..++.
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~i~~ 81 (366)
T TIGR00886 2 NLFFSWFGFFLSFSVWFAFSPLAVQMIKDDLGLSTAQLGNLVAVPVLAGAVLRIILGFLVDKFGPRYTTTLSLLLLAIPC 81 (366)
T ss_pred chHHHHHHHHHHHHHHHHhHHhhhHHHHHHhCCCHHHhhHhhHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHH
Confidence 35566666777777777888888977888899999999999999999999999999999999999999999999999998
Q ss_pred HHhhhhh-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh-----
Q psy14075 273 MMIPLAR-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT----- 346 (414)
Q Consensus 273 ~~~~~~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~----- 346 (414)
+...+.+ +.+.+.+..++.|++.+.. . +......+..|+++|+++.++.....++|..+++.+.+.+.+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~~~g~~~~~~-~---~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~~~l~~~~~~~~ 157 (366)
T TIGR00886 82 LWAGLAVQSYSVLLLLRLFIGIAGGSF-A---SCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVMPPIIGSLIFGA 157 (366)
T ss_pred HHHHHHhhhHHHHHHHHHHHHHhchhh-H---hHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHhcc
Confidence 8888888 8777777777778774433 2 2334567888889999999999888888888888888777653
Q ss_pred -----hchHHHH-HHHHHHHHHH
Q psy14075 347 -----IGFEWML-FIIAILDFMY 363 (414)
Q Consensus 347 -----~g~~~~~-~~~~~~~~~~ 363 (414)
.+|++.| ...+++..+.
T Consensus 158 ~~~~~~~w~~~~~~~~~~~~~~~ 180 (366)
T TIGR00886 158 GLPAHLAWGWAFVIVPAGILLLP 180 (366)
T ss_pred cccccccccchhHHHHHHHHHHH
Confidence 3788888 3334443333
No 148
>PRK12382 putative transporter; Provisional
Probab=99.59 E-value=1.2e-13 Score=130.30 Aligned_cols=167 Identities=17% Similarity=0.244 Sum_probs=131.0
Q ss_pred cChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHH
Q psy14075 190 MDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIG 269 (414)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 269 (414)
.++.++...+..++...........+|.++++++|.|+.+.|+..+...++..+++++.|+++||+|||+.+..+.+...
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~~~lg~s~~~~g~~~s~~~~~~~i~~~~~G~l~Dr~g~r~~l~~~~~~~~ 92 (392)
T PRK12382 13 ANFSLFRIAFAVFLTYMTVGLPLPVIPLFVHHDLGFGNTMVGIAVGIQFLATVLTRGYAGRLADQYGAKRSALQGMLACG 92 (392)
T ss_pred ccccHHHHHHHHHHHHHHHHHHhhhhhHHHHHhcCCcHHHHHHHHHHHHHHHHHHhhhhhHHHHhhcchHHHHHHHHHHH
Confidence 34556666666667777777778889988888899999999999999999999999999999999999999988877766
Q ss_pred HHHHHhh---h-----hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHH
Q psy14075 270 ICLMMIP---L-----ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSG 341 (414)
Q Consensus 270 i~~~~~~---~-----~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g 341 (414)
++.+... . .++.+.+.+..++.|++.+...+... +...+..|+++|+++++.......+|..++|.+.+
T Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~---~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~ 169 (392)
T PRK12382 93 LAGLAYLLAAILPVSAPFKFALLVVGRLILGFGESQLLTGAL---TWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGL 169 (392)
T ss_pred HHHHHHHhhhccccchhHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 5543221 1 23555666777788888776644333 34557778899999999999999999999999999
Q ss_pred HHHhhhchHHHHHHHHHH
Q psy14075 342 TLVNTIGFEWMLFIIAIL 359 (414)
Q Consensus 342 ~l~~~~g~~~~~~~~~~~ 359 (414)
.+.+..||+..+.+..+.
T Consensus 170 ~l~~~~g~~~~~~~~~~~ 187 (392)
T PRK12382 170 LLHSHFGFAALALTTMVL 187 (392)
T ss_pred HHHhccChHHHHHHHHHH
Confidence 999999998766654433
No 149
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=99.59 E-value=1.1e-13 Score=134.22 Aligned_cols=173 Identities=16% Similarity=0.136 Sum_probs=143.2
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q psy14075 195 LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~ 274 (414)
..+++..++...-.......+|.+..+ +|.+..+.++..+.+.++..++.+..|+++||+|||+.+..+..+..++.+.
T Consensus 9 ~~~~~~~~~~~ld~tiv~~a~p~i~~~-l~~s~~~~~~~~~~~~l~~~~~~~~~G~l~D~~Grk~~l~~~~~~~~~~~~~ 87 (495)
T PRK14995 9 VIIVLVYIPVAIDATVLHVAAPTLSMT-LGASGNELLWIIDIYSLVMAGMVLPMGALGDRIGFKRLLMLGGTLFGLASLA 87 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHH
Confidence 345556666666667777788987655 8999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075 275 IPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR-HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWML 353 (414)
Q Consensus 275 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~ 353 (414)
....++.+.+++.-++.|++.+...+..... ..+.+ |+++|+++.|+......+|..+||.+.|.+.++.||++.|
T Consensus 88 ~~~a~~~~~li~~r~l~G~g~~~~~~~~~~~---l~~~~~~~~~r~~~~g~~~~~~~~g~~~gp~lgg~l~~~~gwr~~f 164 (495)
T PRK14995 88 AAFSPTASWLIATRALLAIGAAMIVPATLAG---IRATFTEEKQRNMALGVWAAVGSGGAAFGPLVGGILLEHFYWGSVF 164 (495)
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCChHHHH
Confidence 9998998888888888999888765433322 33443 5788999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy14075 354 FIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~ 371 (414)
++...+.++..++..+..
T Consensus 165 ~i~~~~~~~~~~l~~~~l 182 (495)
T PRK14995 165 LINVPIVLVVMGLTARYV 182 (495)
T ss_pred HHHHHHHHHHHHHHHHhC
Confidence 988777666655554443
No 150
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=99.59 E-value=9.3e-15 Score=136.89 Aligned_cols=167 Identities=14% Similarity=0.196 Sum_probs=134.9
Q ss_pred HHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q psy14075 202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNI 281 (414)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 281 (414)
++.......+....|. +.+.+|.+..+.+++.+...++..++.++.|+++||+|||+.+..+..+..++.++..+.++.
T Consensus 5 ~~~~~~~~~~~~~~~~-~~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~ 83 (379)
T TIGR00881 5 AAYYLVRKNFALAMPY-LVEEIGLSKTDLGLLLSSFSIAYGISKFVMGSVSDRSNPRVFLPIGLILCAIVNLFFGFSTSL 83 (379)
T ss_pred hHHHHhHHhhhhhhHH-HHHHhCCCHhHHHHHHHHHHHHHHhhhhhhhHHHHhhCCeehhHHHHHHHHHHHHHHHHhhhH
Confidence 3444445555566675 555689999999999999999999999999999999999999999999999998888888888
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHH-HHHHHHHhhhchHHHHHHHHHHH
Q psy14075 282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGP-AMSGTLVNTIGFEWMLFIIAILD 360 (414)
Q Consensus 282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~-~~~g~l~~~~g~~~~~~~~~~~~ 360 (414)
+...+..++.|++.+...+...+ ...+..|+++|+++.++.+....+|..++| .+.+.+.+..+|+..|.+.+++.
T Consensus 84 ~~~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (379)
T TIGR00881 84 WVMAALWALNGIFQGMGWPPCGR---TVTKWFSRSERGTWVSFWNCSHNVGGGLLPPLVLFGIAELYSWHWVFIVPGIIA 160 (379)
T ss_pred HHHHHHHHHHHhhccccCCchHH---HHHHhcCHhhheeeEeehhccchhHHHHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 88888888888888777555443 466778888899999999999999999999 46666777788999998887776
Q ss_pred HHHHHHHHHhcC
Q psy14075 361 FMYAPLLYLLRN 372 (414)
Q Consensus 361 ~~~~~~~~~~~~ 372 (414)
++..+..+...+
T Consensus 161 ~~~~~~~~~~~~ 172 (379)
T TIGR00881 161 IIVSLICFLLLR 172 (379)
T ss_pred HHHHHHHheeeC
Confidence 665555444433
No 151
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=99.59 E-value=6.8e-14 Score=134.70 Aligned_cols=177 Identities=10% Similarity=0.139 Sum_probs=142.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHHHHHHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALLGLLIIGI 270 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~i 270 (414)
|.++......+...++++....+++.|+++.+|.+..++++....+.....+..+++|+++|| +|||+++..+.++..+
T Consensus 14 ~~~~~~~~~~~~er~~~y~~~~~l~~yl~~~lg~~~~~a~~i~~~~~~~~~~~~~~~G~laDr~~G~r~~~~~g~~~~~~ 93 (489)
T PRK10207 14 RPFFMIFFVELWERFGYYGVQGILAVFFVKQLGFSQEQAFITFGAFAALVYGLISIGGYVGDHLLGTKRTIVLGAIVLAI 93 (489)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHhhHHHhhhhccchHHHHHHHHHHHHH
Confidence 456666777778889999999999999999999999999888888887888888899999999 9999999999999999
Q ss_pred HHHHhhhhhhhHH-HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc--chhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075 271 CLMMIPLARNINH-LIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA--VYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI 347 (414)
Q Consensus 271 ~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~--~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~ 347 (414)
+.+.+.+..+... +.+...+.+++.|...+...+. ..|.+|++ +|++++++.....++|..+||.+.|++.++.
T Consensus 94 g~~~~~~~~~~~~ll~~~~~l~~ig~g~~~~~~~~l---i~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~g~l~~~~ 170 (489)
T PRK10207 94 GYFMTGMSLLKPDLIFIALGTIAVGNGLFKANPASL---LSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLAPVIADKF 170 (489)
T ss_pred HHHHHHHhccchhHHHHHHHHHHhccccccCCHHHH---HHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9888877654333 3356667788887776655544 55666655 4577899999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 348 GFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
||++.|++.++..+++.+.....+
T Consensus 171 gw~~~F~i~~i~~~~~~~~~~~~~ 194 (489)
T PRK10207 171 GYSVTYNLCGAGLIIALLVYFACR 194 (489)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHcc
Confidence 999999887665555444444443
No 152
>PRK03699 putative transporter; Provisional
Probab=99.58 E-value=2.3e-13 Score=128.33 Aligned_cols=171 Identities=13% Similarity=0.087 Sum_probs=136.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~ 273 (414)
++...+..++.......+...+|.+.+ ++|.|..+.++..+...++..++.++.|++.||+|||+.+..+..+..++.+
T Consensus 9 ~~~~~~~~~~~~~~~~~~g~~~~~i~~-~~~~s~~~~g~~~s~~~~~~~i~~~~~g~l~dr~g~r~~~~~~~~~~~i~~~ 87 (394)
T PRK03699 9 TWISFLSYALTGALVIVTGMVMGPIAE-YFNLPVSSMSNTFTFLNAGILISIFLNAWLMEIIPLKRQLIFGFALMILAVA 87 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHH
Confidence 444455555555555666677787655 5899999999999999999999999999999999999999999998888888
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-hhchHHH
Q psy14075 274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-TIGFEWM 352 (414)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-~~g~~~~ 352 (414)
+..+.++.+.+.+..++.|++.+...+.... ...+..|+++|+.+.+..+....+|+.++|.+.+.+.+ ..||++.
T Consensus 88 l~~~~~~~~~~~~~~~l~G~~~g~~~~~~~~---~i~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~gw~~~ 164 (394)
T PRK03699 88 GLMFSHSLALFSIAMFVLGVVSGITMSIGTF---LITHVYEGKQRGSRLLFTDSFFSMAGMIFPIIAAYLLARSIEWYWV 164 (394)
T ss_pred HHHHcchHHHHHHHHHHHHHhhHhhccchhH---HhhhhcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccHHHH
Confidence 8888888877777788888888776554433 35677788889999999888888999999999998875 4689999
Q ss_pred HHHHHHHHHHHHHHHH
Q psy14075 353 LFIIAILDFMYAPLLY 368 (414)
Q Consensus 353 ~~~~~~~~~~~~~~~~ 368 (414)
|...++..++..++.+
T Consensus 165 f~~~~~~~~~~~~~~~ 180 (394)
T PRK03699 165 YACIGLVYVAIFILTL 180 (394)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9887776666544433
No 153
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=99.58 E-value=1.1e-13 Score=130.47 Aligned_cols=175 Identities=16% Similarity=0.221 Sum_probs=140.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC 271 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~ 271 (414)
|.........+....+.......+|.+.++ +|.+..+.++..+...++..++.++.|+++||+|||+.+..+..+..++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~i~ 81 (392)
T PRK10473 3 RFLLCSFALVLLYPAGIDMYLVGLPRIAAD-LNASEAQLHIAFSVYLAGMAAAMLFAGKIADRSGRKPVAIPGAALFIIA 81 (392)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhHhHHHHHhCChHHHHHHHHHHHHH
Confidence 333444445555556666666778886655 7999999999999999999999999999999999999999999999888
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH
Q psy14075 272 LMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW 351 (414)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~ 351 (414)
.+.....++.+...+..++.|++.+...+... ....|..|+++|+++.++.+....++..++|.+.+.+.+..||+.
T Consensus 82 ~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~---~~i~~~~~~~~r~~~~~~~~~~~~i~~~~~~~i~~~l~~~~g~~~ 158 (392)
T PRK10473 82 SLLCSLAETSSLFLAGRFLQGIGAGCCYVVAF---AILRDTLDDRRRAKVLSLLNGITCIIPVLAPVLGHLIMLKFPWQS 158 (392)
T ss_pred HHHHHHhCcHHHHHHHHHHHHhhhhHHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcChHH
Confidence 88888877777777777777887776644333 346677888999999999999999999999999999888899999
Q ss_pred HHHHHHHHHHHHHHHHHHh
Q psy14075 352 MLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~ 370 (414)
.|++.+++.++..++....
T Consensus 159 ~~~~~~~~~~i~~~~~~~~ 177 (392)
T PRK10473 159 LFYTMAAMGILVLLLSLFI 177 (392)
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 9988887777666554443
No 154
>PRK11043 putative transporter; Provisional
Probab=99.58 E-value=1.5e-13 Score=129.93 Aligned_cols=161 Identities=16% Similarity=0.212 Sum_probs=129.4
Q ss_pred HhhhhchHHH--HHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14075 209 AMLEPSLPIW--MMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIV 286 (414)
Q Consensus 209 ~~~~~~~~~~--~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 286 (414)
.....+.|.+ +++++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+...+.++.+.+.+
T Consensus 20 ~~~~~~~p~~~~i~~~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 99 (401)
T PRK11043 20 LATDMYLPAFKAIQADLQTSASAVSASLSLFLAGFALGQLLWGPLSDRYGRKPVLLAGLSLFALGSLGMLWVESAAQLLV 99 (401)
T ss_pred HHHHHHHhhHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHhhhhHHhhcCCcHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 3334444443 45568999999999999999999999999999999999999999999888888888888888777777
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075 287 PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366 (414)
Q Consensus 287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 366 (414)
..++.|++.+...+... +...+.++++++++..+..+....++..++|.+.+++.+..||+..|.+.+++.++..+.
T Consensus 100 ~~~l~G~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~~~~~~~~~~~~~~~ 176 (401)
T PRK11043 100 LRFVQAVGVCSAAVIWQ---ALVIDRYPAQKANRVFATIMPLVALSPALAPLLGAWLLNHFGWQAIFATLFAITLLLILP 176 (401)
T ss_pred HHHHHHhhhHHHHHHHH---HHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHH
Confidence 77777777665543322 345677888888889998888889999999999999999999999998887777776655
Q ss_pred HHHhcC
Q psy14075 367 LYLLRN 372 (414)
Q Consensus 367 ~~~~~~ 372 (414)
.+..++
T Consensus 177 ~~~~~~ 182 (401)
T PRK11043 177 TLRLKP 182 (401)
T ss_pred HHHcCC
Confidence 555443
No 155
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=99.58 E-value=1.3e-13 Score=130.67 Aligned_cols=167 Identities=16% Similarity=0.235 Sum_probs=135.3
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh
Q psy14075 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA 278 (414)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~ 278 (414)
...++............|.+.++ +|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++..++.+...+.
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~-~~~s~~~~g~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~~~ 100 (406)
T PRK11551 22 LVALLEGLDLQSAGVAAPRMAQE-FGLDVAQMGWAFSAGILGLLPGALLGGRLADRIGRKRILIVSVALFGLFSLATAQA 100 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHh
Confidence 34444444455556666766554 89999999999999999999999999999999999999999988888888777788
Q ss_pred hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHH
Q psy14075 279 RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAI 358 (414)
Q Consensus 279 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~ 358 (414)
++.+.+.+..++.|++.+...+... ....|..|+++|++++++.+....+|..+++.+.+.+.+..+|+..|++.++
T Consensus 101 ~~~~~~~~~~~l~G~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (406)
T PRK11551 101 WDFPSLLVARLLTGVGLGGALPNLI---ALTSEAVGPRLRGTAVSLMYCGVPFGGALASVIGVLAAGDAAWRHIFYVGGV 177 (406)
T ss_pred ccHHHHHHHHHHHHhhHHHHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccCHHHHHHHHHH
Confidence 8888888888888888887654444 3466778889999999999999999999999999888888899999988776
Q ss_pred HHHHHHHHHHH
Q psy14075 359 LDFMYAPLLYL 369 (414)
Q Consensus 359 ~~~~~~~~~~~ 369 (414)
+.++..+....
T Consensus 178 ~~~~~~~~~~~ 188 (406)
T PRK11551 178 GPLLLVPLLMR 188 (406)
T ss_pred HHHHHHHHHHH
Confidence 65555544443
No 156
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=99.58 E-value=6.7e-14 Score=135.87 Aligned_cols=173 Identities=17% Similarity=0.259 Sum_probs=144.7
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH
Q psy14075 195 LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM 274 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~ 274 (414)
....+..++............|.+.++ +|.++.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~p~~~~~-~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~ 83 (485)
T TIGR00711 5 IVLMLGTFMAVLDSTIVNVAIPTIAGD-LGSSLSQVQWVITSYMLANAISIPLTGWLAKRFGTRRLFLISTFAFTLGSLL 83 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh-cCCChhhhhHHHHHHHHHHHHHHHhHHHHHHHhCcHHHHHHHHHHHHHHHHH
Confidence 344455555666666677778876665 8999999999999999999999999999999999999999999999999888
Q ss_pred hhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHH
Q psy14075 275 IPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLF 354 (414)
Q Consensus 275 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~ 354 (414)
....++.+.+.+..++.|++.+...+... ....|..|+++|+++.++.+....+|..++|.+.+++.++.||++.|+
T Consensus 84 ~~~~~~~~~l~~~~~~~G~~~~~~~~~~~---~~i~~~~~~~~r~~~~~~~~~~~~~g~~~g~~~~~~l~~~~~w~~~f~ 160 (485)
T TIGR00711 84 CGVAPNLELMIIFRVIQGFGGGPLIPLSF---STLLNIYPPEKRGRAMAIWGLTVLVAPALGPTLGGWIIENYHWRWIFL 160 (485)
T ss_pred HhCcCCHHHHHHHHHHHHhhhhhHHHHHH---HHHHHHCCHHHHHHHHHHHHHHHHHHhhhhhccHhHhccCcCceehhh
Confidence 88888888888888888988887755444 346688888999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy14075 355 IIAILDFMYAPLLYLLR 371 (414)
Q Consensus 355 ~~~~~~~~~~~~~~~~~ 371 (414)
+.+.+.++..++..+..
T Consensus 161 ~~~~~~~~~~~~~~~~~ 177 (485)
T TIGR00711 161 INVPIGIIVVVVAFFIL 177 (485)
T ss_pred hhhHHHHHHHHHHHHHc
Confidence 88777666655554443
No 157
>PRK09528 lacY galactoside permease; Reviewed
Probab=99.58 E-value=1.3e-13 Score=131.26 Aligned_cols=185 Identities=16% Similarity=0.164 Sum_probs=130.0
Q ss_pred hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHH
Q psy14075 187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLL 266 (414)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 266 (414)
..+|+|++|...+..++...+......++|.|+++++|+++.+.|+..+...++..+++++.|+++||+|||+.+..+..
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~s~~~~g~~~s~~~l~~~i~~~~~G~l~Dr~g~r~~~~~~~~ 84 (420)
T PRK09528 5 YYLKNPNYWIFSLFFFFFFFIWSSWFSFFPIWLHDINGLSGTDTGIIFSANSLFALLFQPLYGLISDKLGLKKHLLWIIS 84 (420)
T ss_pred hhhcCcchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHH
Confidence 45678899998888888888888889999999999899999999999999999999999999999999999998877655
Q ss_pred HHHHHHHHhhh---hhhhH-HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHH
Q psy14075 267 IIGICLMMIPL---ARNIN-HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGT 342 (414)
Q Consensus 267 ~~~i~~~~~~~---~~~~~-~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~ 342 (414)
+..++...+.. .+... .......+.++..+.......+......+..+ +.++..+|..+....+|..++|.+.|.
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~~i~~~~~g~ 163 (420)
T PRK09528 85 GLLVLFGPFFIYVFAPLLQYNILLGAIVGGIYLGFGFLAGAGAIEAYIERVS-RRSGFEYGRARMWGSLGWALCAFIAGI 163 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhccchhhhhhHHHHHH-hhccccchhhHHhhhHHHHHHHHHHHH
Confidence 55443322111 11100 11111222233333332222222222233332 345778888888899999999999999
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 343 LVNTIGFEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 343 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
+.+ .+++..|++.++..++..+..+..+++
T Consensus 164 l~~-~~~~~~f~~~~~~~~~~~~~~~~~~~~ 193 (420)
T PRK09528 164 LFN-INPQINFWLGSGSALILLVLLFFAKPD 193 (420)
T ss_pred HHh-cCchHhHHHHHHHHHHHHHHHhccccc
Confidence 987 488889988777776665555544433
No 158
>PRK12307 putative sialic acid transporter; Provisional
Probab=99.57 E-value=2.2e-13 Score=129.92 Aligned_cols=162 Identities=15% Similarity=0.171 Sum_probs=132.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~ 273 (414)
+....+..+.............|. +++++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.+
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~~~~~-i~~~~~~s~~~~~~~~~~~~~~~~l~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~ 98 (426)
T PRK12307 20 LFSAWLGYVFDGFDFMLIFYIMYL-IKADLGLTDMEGAFLATAAFIGRPFGGALFGLLADKFGRKPLMMWSIVAYSVGTG 98 (426)
T ss_pred HHHHHHHHHHHHhHHHHHHHHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHH
Confidence 334444444444555555555555 4455899999999999999999999999999999999999999999999999988
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075 274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWML 353 (414)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~ 353 (414)
...+.++.+.+.+..++.|++.+...+... ....|..|+++|+++.++.+....+|..+++.+.+.+.+..||++.|
T Consensus 99 ~~~~~~~~~~l~~~r~l~G~g~g~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~lg~~~~~~l~~~l~~~~~w~~~f 175 (426)
T PRK12307 99 LSGLASGVIMLTLSRFIVGMGMAGEYACAS---TYAVESWPKHLKSKASAFLVSGFGIGNIIAAYFMPSFAEAYGWRAAF 175 (426)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHhhHHHHHH---HHHHHhCCHhHhhHhhhHHHHHHhHHHHHHHHHHHHHcccCCHHHHH
Confidence 888888888888888899988887654433 34668888999999999999999999999999999999999999999
Q ss_pred HHHHHH
Q psy14075 354 FIIAIL 359 (414)
Q Consensus 354 ~~~~~~ 359 (414)
++....
T Consensus 176 ~i~~~~ 181 (426)
T PRK12307 176 FVGLLP 181 (426)
T ss_pred HHHHHH
Confidence 875433
No 159
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=99.56 E-value=1.4e-13 Score=129.18 Aligned_cols=160 Identities=19% Similarity=0.376 Sum_probs=134.7
Q ss_pred HHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14075 207 GIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIV 286 (414)
Q Consensus 207 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 286 (414)
+.......+|.+.++ +|.++.+.++..+...++..++.++.|++.||+|||+.+..+..+..++.+.+.+.++.+...+
T Consensus 6 ~~~~~~p~~~~~~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 84 (377)
T PRK11102 6 AIDMYLPALPVIAAD-FGVSAGSVQMTLSAYILGFAIGQLFYGPMADSFGRKPVILGGTLVFALAAVACALAQTIDQLIY 84 (377)
T ss_pred HHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhchHHhhcCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 334556778887766 7999999999999999999999999999999999999999999999999888888888877777
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075 287 PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366 (414)
Q Consensus 287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 366 (414)
..++.|++.+...+.... ...+..|+++|+++.++.+....+|..++|.+.+.+.+..||++.|.+.+.+.++..+.
T Consensus 85 ~~~l~g~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 161 (377)
T PRK11102 85 MRFLHGLAAAAASVVINA---LMRDMFPKEEFSRMMSFVTLVMTIAPLLAPIIGGWLLVWFSWHAIFWVLALAAILAAAL 161 (377)
T ss_pred HHHHHHHHHHHHHHHHHH---HHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHHHHHHHHH
Confidence 888888887776554443 45677788899999999999999999999999999999999999998887777666555
Q ss_pred HHHh
Q psy14075 367 LYLL 370 (414)
Q Consensus 367 ~~~~ 370 (414)
....
T Consensus 162 ~~~~ 165 (377)
T PRK11102 162 VFFF 165 (377)
T ss_pred HHHh
Confidence 4433
No 160
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=99.56 E-value=2.1e-13 Score=126.76 Aligned_cols=160 Identities=14% Similarity=0.040 Sum_probs=124.4
Q ss_pred HHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q psy14075 206 TGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLI 285 (414)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 285 (414)
.....+...+|.+.++ +|.++.+.|+..+.+.++..++++..|+++||+|||+++..+......+.+.....++.+.+.
T Consensus 5 ~~~~~~~~~lp~i~~~-~~~s~~~~g~~~s~~~~g~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~l~ 83 (368)
T TIGR00903 5 AIWVTFSPVLSLVAED-IDVSKEELGLLAITYPAAFLALTIPSGLLLDRAFKRWFLFGSLATFAAAAGRLLDPFNYEWLL 83 (368)
T ss_pred HHHHHHHhhHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhccHHHHH
Confidence 3445556667776554 899999999999999999999999999999999999876655544444433223335677778
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy14075 286 VPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP 365 (414)
Q Consensus 286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 365 (414)
+.-++.|++.+... +......|..|+++|+++.++.+....+|..+++.+.+++.+..||+..|.+.+++.++..+
T Consensus 84 ~~R~l~G~g~~~~~----~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~l~~~~gWr~~f~~~~~l~~~~~~ 159 (368)
T TIGR00903 84 ACQLLAALGQPFLL----NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLKIYTAGGLQLLIIPIAAVAAAGII 159 (368)
T ss_pred HHHHHHHhHhHHHH----HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHH
Confidence 88888888887542 22233467888999999999999999999999999999999999999999998777766655
Q ss_pred HHHHh
Q psy14075 366 LLYLL 370 (414)
Q Consensus 366 ~~~~~ 370 (414)
+.++.
T Consensus 160 ~~~~~ 164 (368)
T TIGR00903 160 LVLAA 164 (368)
T ss_pred HHHHH
Confidence 55443
No 161
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=99.56 E-value=5.4e-13 Score=128.71 Aligned_cols=166 Identities=14% Similarity=0.175 Sum_probs=125.8
Q ss_pred HHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhh
Q psy14075 202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNI 281 (414)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 281 (414)
++............|.+ .+.+|.+..+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.++..+.++.
T Consensus 46 ~~~~~~~~~~~~~~~~l-~~~~gls~~~~g~~~~~~~~~~~~~~~~~G~l~dr~G~r~~~~~~~~~~~~~~~~~~~~~s~ 124 (476)
T PLN00028 46 FTCFVSTFAAAPLLPII-RDNLNLTKSDIGNAGIASVSGSIFSRLAMGPVCDLYGPRYGSAFLLMLTAPAVFCMSLVSSA 124 (476)
T ss_pred HHHHHHHHHHHHHHHHH-HHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHhcCH
Confidence 33333344444455554 55589999999999888899999999999999999999999999888888888888888777
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh---------hhchHHH
Q psy14075 282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN---------TIGFEWM 352 (414)
Q Consensus 282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~---------~~g~~~~ 352 (414)
+.+.+..++.|++.+... +....+.+.+|+++||++.|+.+...++|..+++.+.+.+.+ ..||++.
T Consensus 125 ~~l~~~r~l~G~~~~~~~----~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~~~i~~~~~~~~~~~~~gWr~~ 200 (476)
T PLN00028 125 TGFIAVRFFIGFSLATFV----SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLMPLVFPLIKDAGAPSFTAWRIA 200 (476)
T ss_pred HHHHHHHHHHHHHHHhhH----HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcchhhhHHH
Confidence 777666677777765432 222346688889999999999988888888888777765533 2489999
Q ss_pred HHHHHHHHHHHHHHHHHhcC
Q psy14075 353 LFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~ 372 (414)
|.+.+++.++..+..+++.+
T Consensus 201 f~i~g~l~l~~~l~~~~~~~ 220 (476)
T PLN00028 201 FFVPGLLHIIMGILVLTLGQ 220 (476)
T ss_pred HHHHHHHHHHHHHHHHHHcC
Confidence 99988887776665555543
No 162
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=99.56 E-value=1.5e-13 Score=128.69 Aligned_cols=159 Identities=16% Similarity=0.147 Sum_probs=128.8
Q ss_pred HHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHH
Q psy14075 208 IAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVP 287 (414)
Q Consensus 208 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 287 (414)
.+......|. +++++|.+..+.++..+...++..+++++.|+++||+|||+.+..+..+..++.+...+.++.+.+.+.
T Consensus 19 ~~~~~~~~~~-~~~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~d~~G~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (377)
T TIGR00890 19 VYTWTLLAPP-LGRYFGVGVTAVAIWFTLLLIGLAMSMPVGGLLADKFGPRAVAMLGGILYGLGFTFYAIADSLAALYLT 97 (377)
T ss_pred HhhhhhHHHH-HHHHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHcCccchhHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444555665 455589999999999999999999999999999999999999999999999999888888888888888
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy14075 288 NAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLL 367 (414)
Q Consensus 288 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 367 (414)
..+.|++.+...+...+ ...+..| ++|+++.++.+....+|..+++++.+.+.+..||++.|.+.++..++..+..
T Consensus 98 ~~~~g~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~ 173 (377)
T TIGR00890 98 YGLASAGVGIAYGIALN---TAVKWFP-DKRGLASGIIIGGYGLGSFILSPLITSVINLEGVPAAFIYMGIIFLLVIVLG 173 (377)
T ss_pred HHHHhHHHHHHHHhHHH---HHHHHcC-cccHHHHHHHHHhcchhHhHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHH
Confidence 88888888766443332 2344444 5689999999999899988888888888888899999998888777766655
Q ss_pred HHhc
Q psy14075 368 YLLR 371 (414)
Q Consensus 368 ~~~~ 371 (414)
+...
T Consensus 174 ~~~~ 177 (377)
T TIGR00890 174 AFLI 177 (377)
T ss_pred HHhe
Confidence 5443
No 163
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=99.56 E-value=2.4e-13 Score=128.85 Aligned_cols=159 Identities=18% Similarity=0.197 Sum_probs=129.5
Q ss_pred HHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14075 207 GIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIV 286 (414)
Q Consensus 207 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 286 (414)
....+...+|.+. +++|.++.+.++..+...++..++.++.|+++||+|||+.+..+.....++.+.....++.+.+..
T Consensus 28 ~~~~~~~~~~~~~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~ 106 (406)
T PRK15402 28 ANDMIQPGMLAVV-EDFNAGAEWVPTSMTAYLAGGMFLQWLLGPLSDRIGRRPVMLAGVAFFILTCLAILLAQSIEQFTL 106 (406)
T ss_pred hhhhHhcchHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHHHHHHHHHccHHHHHH
Confidence 4455556667655 458999999999999999999999999999999999999999999888888888888888777777
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075 287 PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366 (414)
Q Consensus 287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 366 (414)
..++.|++.+...+... ....|..|++++++..++......++..++|.+.+.+.+..+|++.|++.+++.++..+.
T Consensus 107 ~~~l~G~~~~~~~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~~w~~~~~~~~~~~~~~~~~ 183 (406)
T PRK15402 107 LRFLQGIGLCFIGAVGY---AAIQESFEEADAIKITALMANVALLAPLLGPLVGAALIHVLPWRGMFVLFAALAALSFFG 183 (406)
T ss_pred HHHHHHhHhhhHHHHHH---HHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccHHHHHHHHHHHHHHHH
Confidence 77888887776644333 335577788888899999888888999999999999999999999998888777766554
Q ss_pred HHH
Q psy14075 367 LYL 369 (414)
Q Consensus 367 ~~~ 369 (414)
.+.
T Consensus 184 ~~~ 186 (406)
T PRK15402 184 LWR 186 (406)
T ss_pred HHH
Confidence 443
No 164
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=99.55 E-value=4e-13 Score=129.01 Aligned_cols=154 Identities=14% Similarity=0.190 Sum_probs=115.2
Q ss_pred hhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh----hhHHHHHH
Q psy14075 212 EPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR----NINHLIVP 287 (414)
Q Consensus 212 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~~~ 287 (414)
....|. +.+. |.++.+.++..+...++..++.++.|+++||+|||+++..+.++.+++.+.+.+.+ +.+...+.
T Consensus 49 ~~~~p~-l~~~-g~s~~~~g~~~~~~~i~~~~~~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 126 (452)
T PRK11273 49 ALAMPY-LVEQ-GFSRGDLGFALSGISIAYGFSKFIMGSVSDRSNPRVFLPAGLILAAAVMLFMGFVPWATSSIAVMFVL 126 (452)
T ss_pred HHhhHH-HHHc-CCCHHHHHHHHHHHHHHHHHHHhhhhhhhhccCCchhHHHHHHHHHHHHHHHHhhhcccccHHHHHHH
Confidence 345564 5565 99999999999999999999999999999999999999999988888877776643 44455566
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhH-HHHHHHHHHhhhchHHHHHHHHHHHHHHHHH
Q psy14075 288 NAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAI-GPAMSGTLVNTIGFEWMLFIIAILDFMYAPL 366 (414)
Q Consensus 288 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~i-g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~ 366 (414)
.++.|++.+...+... ....+.+|+++|+++.|+.+....+|+.+ +|.+...+....||++.|++.+++.++..++
T Consensus 127 ~~l~gi~~g~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~gw~~~f~i~~~~~~~~~~l 203 (452)
T PRK11273 127 LFLCGWFQGMGWPPCG---RTMVHWWSQKERGGIVSVWNCAHNVGGGLPPLLFLLGMAWFNDWHAALYMPAFAAILVALF 203 (452)
T ss_pred HHHHHHHHhccchHHH---HHHHHhCChHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHH
Confidence 6777877776644333 33567788899999999999988888754 4444333434458999999887776665544
Q ss_pred HHHh
Q psy14075 367 LYLL 370 (414)
Q Consensus 367 ~~~~ 370 (414)
.++.
T Consensus 204 ~~~~ 207 (452)
T PRK11273 204 AFAM 207 (452)
T ss_pred HHHH
Confidence 4433
No 165
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=99.55 E-value=3.1e-13 Score=129.31 Aligned_cols=157 Identities=17% Similarity=0.219 Sum_probs=120.4
Q ss_pred hhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh----hhhHHHH
Q psy14075 210 MLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA----RNINHLI 285 (414)
Q Consensus 210 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~----~~~~~~~ 285 (414)
.+....|. +++ .|.++.+.++..+...++..++.++.|+++||+|||+.+..+.++.+++.+..... ++.+.+.
T Consensus 45 ~~~~~~p~-~~~-~g~s~~~~g~~~~~~~~~~~~~~~~~G~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 122 (438)
T TIGR00712 45 NFALAMPY-LVE-QGFSKGELGFALSAISIAYGFSKFIMGSVSDRSNPRVFLPAGLILSAAVMLLMGFVPWATSSIAIMF 122 (438)
T ss_pred cHHhhhHH-HHH-cCCCHhHhHHHHHHHHHHHHHhhhccchhhhccCCceehHHHHHHHHHHHHHHhccccccchHHHHH
Confidence 34445554 555 49999999999999999999999999999999999999988888888877666543 2344445
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-hhchHHHHHHHHHHHHHHH
Q psy14075 286 VPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-TIGFEWMLFIIAILDFMYA 364 (414)
Q Consensus 286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-~~g~~~~~~~~~~~~~~~~ 364 (414)
+..++.|++.+...+... ..+.+.+|+++|++++|+.+....+|+.++|.+.+...+ ..+|+..|++.+++.++..
T Consensus 123 ~~~~l~g~~~g~~~~~~~---~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~w~~~f~~~~~~~~i~~ 199 (438)
T TIGR00712 123 VLLFLNGWFQGMGWPPCG---RTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLVLLGMAWFNDWHAALYFPAICAIIVA 199 (438)
T ss_pred HHHHHHHHHhhcchHHHH---HHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHH
Confidence 555667777766644333 345678888999999999999999999999988876554 4689999999888777765
Q ss_pred HHHHHhc
Q psy14075 365 PLLYLLR 371 (414)
Q Consensus 365 ~~~~~~~ 371 (414)
+..++..
T Consensus 200 ~~~~~~~ 206 (438)
T TIGR00712 200 LFAFAMM 206 (438)
T ss_pred HHHHHhc
Confidence 5444433
No 166
>PRK03893 putative sialic acid transporter; Provisional
Probab=99.55 E-value=6.4e-13 Score=129.41 Aligned_cols=162 Identities=17% Similarity=0.220 Sum_probs=133.9
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~ 273 (414)
+....+..++..+.........|.+. +++|.++.+.++..+...++..++.++.|+++||+|||+.+..+..+.+++.+
T Consensus 22 ~~~~~~~~~~~~~~~~~~~~~~~~i~-~~~~~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~ 100 (496)
T PRK03893 22 FSAAWLGYLLDGFDFVLITLVLTEVQ-GEFGLTTVQAASLISAAFISRWFGGLLLGAMGDRYGRRLAMVISIVLFSVGTL 100 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 33445555555566666666667654 55899999999999999999999999999999999999999999999999888
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHH
Q psy14075 274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWML 353 (414)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~ 353 (414)
.+.+.++.+.+.+..++.|++.+...+... ....|..|+++|+++.++.+....+|..++|.+.+.+.+..+|++.|
T Consensus 101 ~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~l~~~~~w~~~f 177 (496)
T PRK03893 101 ACGFAPGYWTLFIARLVIGMGMAGEYGSSA---TYVIESWPKHLRNKASGFLISGFSIGAVVAAQVYSLVVPVWGWRALF 177 (496)
T ss_pred HHHHHhHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCHHHHH
Confidence 888888888888888888888877654444 34668888999999999999999999999999999999999999998
Q ss_pred HHHHHH
Q psy14075 354 FIIAIL 359 (414)
Q Consensus 354 ~~~~~~ 359 (414)
.+....
T Consensus 178 ~~~~~~ 183 (496)
T PRK03893 178 FIGILP 183 (496)
T ss_pred HHHHHH
Confidence 765443
No 167
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=99.54 E-value=4.8e-13 Score=125.94 Aligned_cols=173 Identities=10% Similarity=0.096 Sum_probs=131.1
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075 191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI 270 (414)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i 270 (414)
+|.++.+.+..++..++........+.+.+ .++.++.+.++..+.+.+...+..++.|+++||+|||+++..+..+.++
T Consensus 2 ~~~f~~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~~~~~~~~l~~~l~~~~~G~laDr~grr~vl~~~~~~~~~ 80 (393)
T PRK11195 2 SKGFYAIMAAQFFSALADNALLFAAIALLK-ELHYPDWSQPLLQMFFVLAYIVLAPFVGAFADSFPKGRVMFIANGIKLL 80 (393)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHH-HcCCcHHHHHHHHHHHHHHHHHHHhhhhHhhhccCCchhhHHHHHHHHH
Confidence 456677777777777665555555565554 4788888899999999999999999999999999999999999998888
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchH
Q psy14075 271 CLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFE 350 (414)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~ 350 (414)
+.+.+....+. .+..++.|++.+...|...+ .+.|..|+++|++++|+.+....++..+||.++|.+.+.. +.
T Consensus 81 ~~~~~~~~~~~---~~~r~l~G~~~a~~~pa~~a---~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~l~~~~-~~ 153 (393)
T PRK11195 81 GCLLMLFGIHP---LLAYGLVGIGAAAYSPAKYG---ILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGALADPH-AE 153 (393)
T ss_pred HHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHH---HHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH
Confidence 76665555443 44556778888877655444 4668888999999999999999999999999999999854 66
Q ss_pred HHHHHHHHHHHHHHHHHHHhc
Q psy14075 351 WMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 351 ~~~~~~~~~~~~~~~~~~~~~ 371 (414)
..+.+.+.+.+++.+....++
T Consensus 154 ~~~~i~~~~~~~~~~~~~~l~ 174 (393)
T PRK11195 154 AALAVCALIYLLAALFNLFIP 174 (393)
T ss_pred HHHHHHHHHHHHHHHHHhcCC
Confidence 666665554444433333333
No 168
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=99.54 E-value=4.6e-13 Score=126.87 Aligned_cols=160 Identities=17% Similarity=0.182 Sum_probs=131.4
Q ss_pred HHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHH
Q psy14075 206 TGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLI 285 (414)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 285 (414)
.........+|.. .+.++.+..+.++..+.+.++..++.++.|+++||+|||+++..+..+..++.+.....++.+.+.
T Consensus 30 ~~~~~~~p~l~~i-~~~~~~~~~~~~~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~a~~~~~l~ 108 (413)
T PRK15403 30 LTTDLIQPGIINV-VRDFNADVSLAPASVSLYLAGGMALQWLLGPLSDRIGRRPVLITGALIFTLACAATLFTTSMTQFL 108 (413)
T ss_pred HHHHhhccCHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHhhhHHHHHcCchHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 3444455566664 455899999999999999999999999999999999999999999999998888888888888888
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy14075 286 VPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP 365 (414)
Q Consensus 286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 365 (414)
+..++.|++.+...+.. .....|.+|+++++++.++.+....++..+||.+.+.+.+..||++.|++.++..++..+
T Consensus 109 ~~r~l~Gi~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~lg~~l~~~~gw~~~f~~~~~~~~i~~~ 185 (413)
T PRK15403 109 IARFIQGTSICFIATVG---YVTVQEAFGQTKGIKLMAIITSIVLVAPIIGPLSGAALMHFVHWKVLFAIIAVMGLIAFV 185 (413)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 88888888776543222 233557778888899999999999999999999999999989999999998887777665
Q ss_pred HHHH
Q psy14075 366 LLYL 369 (414)
Q Consensus 366 ~~~~ 369 (414)
..++
T Consensus 186 ~~~~ 189 (413)
T PRK15403 186 GLLL 189 (413)
T ss_pred HHHH
Confidence 5443
No 169
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=99.54 E-value=7.4e-13 Score=125.00 Aligned_cols=167 Identities=14% Similarity=0.220 Sum_probs=131.8
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q psy14075 197 AAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP 276 (414)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~ 276 (414)
......+..+........+|.+.++ +|.|+.+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+...
T Consensus 13 ~~~~~~~~~~~~~~~~p~~~~i~~~-~~~s~~~~~~~~~~~~~~~~~~~~~~G~l~Dr~grr~~~~~~~~~~~~~~~~~~ 91 (394)
T PRK11652 13 LVLLVAVGQMAQTIYVPAIADMARD-LNVREGAVQAVMAAYLLTYGLSQLFYGPLSDRVGRRPVILVGMSIFILGTLVAL 91 (394)
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHH-hCCCHHHHHHHHHHHHHHHHHHHHhhhhHHHhcCChHHHHHHHHHHHHHHHHHH
Confidence 3333444445555555667776655 899999999999999999999999999999999999999999988888888877
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHH
Q psy14075 277 LARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFII 356 (414)
Q Consensus 277 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~ 356 (414)
..++.+.+.+..++.|++.+...+... ....+..++++++++.+..+....++..++|.+.+.+.+..||+..|.+.
T Consensus 92 ~~~~~~~l~~~~~~~g~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~l~~~~g~~~~f~~~ 168 (394)
T PRK11652 92 FAHSLTVLIAASAIQGLGTGVGGVMAR---TLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGGLLTTLFGWRACYLFL 168 (394)
T ss_pred HHccHHHHHHHHHHHHhhhhHHHHHHH---HHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccChHHHHHHH
Confidence 777877777778888887776543322 23456667778899999999999999999999999999989999999887
Q ss_pred HHHHHHHHHHH
Q psy14075 357 AILDFMYAPLL 367 (414)
Q Consensus 357 ~~~~~~~~~~~ 367 (414)
++..++..+..
T Consensus 169 ~~~~~~~~~~~ 179 (394)
T PRK11652 169 LLLGAGVTFSM 179 (394)
T ss_pred HHHHHHHHHHH
Confidence 77665544433
No 170
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=99.53 E-value=4e-13 Score=125.83 Aligned_cols=168 Identities=15% Similarity=0.207 Sum_probs=125.4
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHH-HHHHHHHHHHHHhhh
Q psy14075 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAAL-LGLLIIGICLMMIPL 277 (414)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~-~~~~~~~i~~~~~~~ 277 (414)
+..++...+.......+|.|+++++|.|+.+.|+..+...+...+.+++.|+++||+|||+.+. .+.....++.+...+
T Consensus 4 ~~~~~~~~~~~~~~~~l~~~l~~~~g~s~~~~g~~~~~~~~~~~~~~~~~g~l~Dr~g~r~~~~~~~~~~~~~~~~~~~~ 83 (375)
T TIGR00899 4 LVAFLTGIAGALQFPTLSLFLSEEVRARPAMIGLFYTGSAIVGIAVSQLLATRSDYQGDRKGLILFCCLLAALACLLFAW 83 (375)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHcccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHh
Confidence 4466667777788889999998889999999999999999999999999999999999887654 455555566666677
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhH--HhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHH
Q psy14075 278 ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSV--YAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFI 355 (414)
Q Consensus 278 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~--~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~ 355 (414)
.++.+.+++..++.+.+.+...+... ....+..|++.|+.+ .+.......+|..++|.+.+.+.+..||++.|++
T Consensus 84 ~~~~~~l~~~~~~~g~~~~~~~p~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~~l~~~~~~~~~f~~ 160 (375)
T TIGR00899 84 NRNYFLLLVLGVLLSSFASTANPQLF---ALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAFWLALGFGFTVMFLT 160 (375)
T ss_pred cchHHHHHHHHHHHHhhhhhhHHHHH---HHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHHHHHHhcccHHHHHH
Confidence 77766655555555554444433222 223344455555543 5777778889999999999999999999999999
Q ss_pred HHHHHHHHHHHHHH
Q psy14075 356 IAILDFMYAPLLYL 369 (414)
Q Consensus 356 ~~~~~~~~~~~~~~ 369 (414)
.+.+.++..+..++
T Consensus 161 ~~~~~~~~~~~~~~ 174 (375)
T TIGR00899 161 AALAFVLCGVLVWL 174 (375)
T ss_pred HHHHHHHHHHHHHH
Confidence 88877766655554
No 171
>PRK03633 putative MFS family transporter protein; Provisional
Probab=99.52 E-value=8.4e-13 Score=123.97 Aligned_cols=153 Identities=19% Similarity=0.230 Sum_probs=131.0
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075 191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI 270 (414)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i 270 (414)
++.++.+....++...........+|.+.++ +|.|..+.|+..+...++..+++++.|+++||+|||+.+..+..+.++
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~-~~~s~~~~G~~~s~~~l~~~~~~~~~g~l~dr~g~k~~~~~~~~~~~~ 83 (381)
T PRK03633 5 TRPVLLLLCGLLLLTLAIAVLNTLVPLWLAQ-EHLPTWQVGVVSSSYFTGNLVGTLLAGYVIKRIGFNRSYYLASLIFAA 83 (381)
T ss_pred HHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4557777777888888888888999998886 799999999999999999999999999999999999999999999999
Q ss_pred HHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075 271 CLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI 347 (414)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~ 347 (414)
+.+...+.++.+.+.+..++.|++.+...+..... ..+..++++|+++++..+....+|..+||.+.+.+.+..
T Consensus 84 ~~~~~~~~~~~~~l~~~~~l~G~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~l~~~~ 157 (381)
T PRK03633 84 GCAGLGLMVGFWSWLAWRFVAGIGCAMIWVVVESA---LMCSGTSRNRGRLLAAYMMVYYLGTVLGQLLVSKVSTEL 157 (381)
T ss_pred HHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccc
Confidence 88888888888888888888898888765543333 345566778999999999999999999999999987753
No 172
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=99.52 E-value=9.1e-13 Score=124.62 Aligned_cols=174 Identities=15% Similarity=0.126 Sum_probs=128.0
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC 271 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~ 271 (414)
+.+....+..++..........+++.++++ +|.++.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++
T Consensus 13 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~g~s~~~~g~~~~~~~~~~~i~~~~~g~l~dr~g~k~~l~~~~~~~~~~ 91 (402)
T TIGR00897 13 LNLLWGYIGVVVFMTGDGLEQGWLSPFLKA-LGLSPQQSASAFTLYGIAAAISAWISGVVAEIIGPLKTMMIGLLLWCVG 91 (402)
T ss_pred chhhHHHHHHHHHHHhhhhHHHhHHHHHHH-hCCCHHHhHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHHHHHHHHHHHH
Confidence 455566666666667766677788888865 7999999999999999999999999999999999999999988888877
Q ss_pred HHHhh---hh-hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHH-hHHHHHHHHHHhh
Q psy14075 272 LMMIP---LA-RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGF-AIGPAMSGTLVNT 346 (414)
Q Consensus 272 ~~~~~---~~-~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~-~ig~~~~g~l~~~ 346 (414)
.+... .. ++.+.+.+..++.|++.+...+. ......+..|+++|++++|+.+...++|. .++|.+.+.+.+.
T Consensus 92 ~~~~~~~~~~~~~~~~l~~~~~i~G~g~~~~~~~---~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~~~~l~~~ 168 (402)
T TIGR00897 92 HAAFIVFGLGHANYPLILLFYGIRGLGYPLFAYS---FLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYYSSYAIPA 168 (402)
T ss_pred HHHHHHHhccCccHHHHHHHHHHHHcchHHHHhH---HHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 55432 22 34555555666667666544322 22345577788899999999999999996 5899999999988
Q ss_pred hchHHHHHHHHHHHHHHHHHHHH
Q psy14075 347 IGFEWMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~ 369 (414)
.|++..++.......+..++..+
T Consensus 169 ~g~~~~~~~~~~~~~~~~~~~~~ 191 (402)
T TIGR00897 169 FGEMNTLWSALAFVLTGGVIALF 191 (402)
T ss_pred cchHHHHHHHHHHHHHHHHHHHh
Confidence 88766555444333333333333
No 173
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=99.52 E-value=1.2e-12 Score=130.29 Aligned_cols=160 Identities=15% Similarity=0.222 Sum_probs=130.0
Q ss_pred hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHH
Q psy14075 211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAG 290 (414)
Q Consensus 211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~ 290 (414)
+...+|.+ .+.+|.+..+.+++.+...++.+++.++.|+++||+|||+.++++.++.+++.++..+.++.+.+++..++
T Consensus 186 is~ilp~i-~~~~gls~~~~g~l~s~~~lG~iiG~li~G~LsDR~GRR~~lii~lil~~i~~ll~afa~s~~~llv~R~l 264 (742)
T TIGR01299 186 VGFVLPSA-EKDLCIPDSGKGMLGLIVYLGMMVGAFFWGGLADKLGRKQCLLICLSVNGFFAFFSSFVQGYGFFLFCRLL 264 (742)
T ss_pred HHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 44455554 44589999999999999999999999999999999999999999999988888888888888888888899
Q ss_pred HHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh-------------chHHHHHHHH
Q psy14075 291 LGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI-------------GFEWMLFIIA 357 (414)
Q Consensus 291 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-------------g~~~~~~~~~ 357 (414)
.|++.+...+... .++.|..|++.||+..++.+....+|..+++.++..+...+ +|++.+++.+
T Consensus 265 ~G~g~g~~~p~~~---~~isE~~p~~~Rg~~~g~~~~~~~iG~ila~~la~~il~~~G~~~~~g~~~~~~gWR~l~~i~~ 341 (742)
T TIGR01299 265 SGFGIGGAIPIVF---SYFAEFLAQEKRGEHLSWLCMFWMIGGIYAAAMAWAIIPHYGWSFQMGSAYQFHSWRVFVIVCA 341 (742)
T ss_pred HHHHHHHHHHHHH---HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhccccccccccHHHHHHHHH
Confidence 9999888755444 45778889999999999999999999999998877766543 4778887777
Q ss_pred HHHHHHHHHHHHhcCCC
Q psy14075 358 ILDFMYAPLLYLLRNPP 374 (414)
Q Consensus 358 ~~~~~~~~~~~~~~~~~ 374 (414)
+..++.++..+++++.+
T Consensus 342 lp~ll~ll~~~~lPESP 358 (742)
T TIGR01299 342 FPCVFAIGALTFMPESP 358 (742)
T ss_pred HHHHHHHHHHHHcCCCH
Confidence 76666665555565543
No 174
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=99.52 E-value=1.4e-12 Score=122.85 Aligned_cols=152 Identities=16% Similarity=0.063 Sum_probs=126.9
Q ss_pred HhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy14075 209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPN 288 (414)
Q Consensus 209 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 288 (414)
......+|... +++|.|..+.++..+.+.++..++.++.|++.||+|||+++..+..+.+++.+...++++.+.+.+..
T Consensus 26 ~~~~~~lp~i~-~~~~~s~~~~g~~~s~~~~~~~l~~~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~~a~~~~~ll~~r 104 (393)
T PRK09705 26 TSVGPLLPQLR-QASGMSFSVAALLTALPVVTMGGLALAGSWLHQHVSERRSVAISLLLIAVGALMRELYPQSALLLSSA 104 (393)
T ss_pred hccchhHHHHH-HHhCCCHHHHHHHHHHHHHHHHHHhhhhHHHHHHhCchHHHHHHHHHHHHHHHHHHHCcchHHHHHHH
Confidence 44556677755 45899999999999999999999999999999999999999999999999999999999999888889
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHH
Q psy14075 289 AGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI-GFEWMLFIIAILDFMYAP 365 (414)
Q Consensus 289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~ 365 (414)
++.|++.+...+..... ..+.+| ++|++++|........|..+++.+.+++.++. +|+..+.+.++..++...
T Consensus 105 ~l~Gig~~~~~~~~~~~---~~~~~~-~~~~~~~g~~~~~~~~g~~~g~~~~~~l~~~~~~w~~~~~~~~~~~~~~~~ 178 (393)
T PRK09705 105 LLGGVGIGIIQAVMPSV---IKRRFQ-QRTPLVMGLWSAALMGGGGLGAAITPWLVQHSETWYQTLAWWALPAVVALF 178 (393)
T ss_pred HHHHhHHHHHhhhhhHH---HHHHcc-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Confidence 99999998775544432 445555 67899999999999999999999999998876 799887766555444333
No 175
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=99.52 E-value=1.1e-12 Score=125.84 Aligned_cols=157 Identities=11% Similarity=0.035 Sum_probs=123.4
Q ss_pred hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH-H
Q psy14075 211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPN-A 289 (414)
Q Consensus 211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~-~ 289 (414)
+..++|.+.+ .+|.+..+.++..+...+...++.++.|+++||++||+.++.+.++..++.+...+.++.+.++... +
T Consensus 38 ~~~~~~~i~~-~~g~s~~~~~~~~s~~~~~~~~~~~~~G~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 116 (455)
T TIGR00892 38 VTVFFKELQQ-IFQATYSETAWISSIMLAVLYAGGPISSILVNRFGCRPVVIAGGLLASLGMILASFSSNVIELYLTAGF 116 (455)
T ss_pred hhhhHHHHHH-HhCcchhHHHHHHHHHHHHHHHhhHHHHHHHHHcCchHHHHhhHHHHHHHHHHHHHhhhHHHHHHHHHH
Confidence 4445666544 5899999999999998888889999999999999999999999888888888877777766654433 5
Q ss_pred HHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHH
Q psy14075 290 GLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 290 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 369 (414)
+.|++.+...+... ....+.++ ++|+++.|+.+....+|..++|.+.+.+.+.+||+++|++.+++.++..+..++
T Consensus 117 l~G~~~~~~~~~~~---~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~~~l~~~~gwr~~f~~~~~~~~~~~v~~~~ 192 (455)
T TIGR00892 117 ITGLGLAFNFQPSL---TMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLNQYLFESFGWRGSFLILGGLLLHCCVCGAL 192 (455)
T ss_pred HHHhcchhhhhHHH---HHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHH
Confidence 66777765433222 33445554 678999999999999999999999999999999999999998877766555555
Q ss_pred hcC
Q psy14075 370 LRN 372 (414)
Q Consensus 370 ~~~ 372 (414)
.++
T Consensus 193 ~~~ 195 (455)
T TIGR00892 193 MRP 195 (455)
T ss_pred hCC
Confidence 443
No 176
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=99.51 E-value=1.1e-12 Score=123.81 Aligned_cols=175 Identities=17% Similarity=0.249 Sum_probs=124.4
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075 191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI 270 (414)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i 270 (414)
||.+|......++...+...+..++|.|+++++|.++.+.|...+...+...+++++.|+++||+|||+.+..+.....+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~s~~~~g~~~~~~~l~~~i~~~~~G~l~Dr~grr~~~~~~~~~~~~ 80 (396)
T TIGR00882 1 NTNFWMFGLFFFLYFFIMSAYFPFFPIWLHDVNGLSKTDTGIVFSCISLFSILFQPLFGLISDKLGLKKHLLWIISGLLV 80 (396)
T ss_pred ChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 57888888888888888889999999999998999999999999999999999999999999999999998876655544
Q ss_pred HHHHh---hhhh-----hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHH
Q psy14075 271 CLMMI---PLAR-----NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGT 342 (414)
Q Consensus 271 ~~~~~---~~~~-----~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~ 342 (414)
+.... ...+ ......+..++.+++.+...+.... ...+. .+ .++..+|......++|..++|.+.|.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~-~~-~~~~~~g~~~~~~~~g~~~g~~~~g~ 155 (396)
T TIGR00882 81 LFAPFFIYVFGPLLQSNILVGAIVGGLYLGFVFSAGAGAIEA---YIEKV-SR-NSNFEYGKARMFGCVGWALCASIAGI 155 (396)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhccchhhHHH---HHHHh-hh-hcccccchhhhhcccHHHHHHHHHhh
Confidence 33221 1111 1111122233444444443332222 22232 22 23456677778888999999999998
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 343 LVNTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 343 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
+.+ .+|+..|++.+.+.++..++.+...
T Consensus 156 l~~-~~~~~~f~~~~~~~~~~~~~~~~~~ 183 (396)
T TIGR00882 156 LFS-IDPQIVFWLGSGFALILMLLLMFAK 183 (396)
T ss_pred hhc-cCchHHHHHHHHHHHHHHHHHHHhC
Confidence 866 5999999888877777665554433
No 177
>PRK15011 sugar efflux transporter B; Provisional
Probab=99.50 E-value=3.3e-12 Score=120.46 Aligned_cols=177 Identities=16% Similarity=0.161 Sum_probs=119.8
Q ss_pred ChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHH-HHHhhhhhhhhhhhhhhhHHHH-HHHHHHH
Q psy14075 191 DPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASI-SYLIGTNLFGPLGHRMGRYLAA-LLGLLII 268 (414)
Q Consensus 191 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~-~~~~~~~~~g~l~d~~~~~~~~-~~~~~~~ 268 (414)
|.+.+...+..++...........+|.|+++++|.|+.+.|+..+...+ +...+.+..++ .||+|+|+.+ ..+.+..
T Consensus 14 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~~~~~~s~~~~g~~~~~~~~~~~~~~~~~~~~-~dr~g~r~~~~~~~~~~~ 92 (393)
T PRK15011 14 DLTSTAFLIVAFLTGIAGALQTPTLSIFLTDEVHARPAMVGFFFTGSAVIGILVSQFLAGR-SDKRGDRKSLIVFCCLLG 92 (393)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHH-HhcccchhHHHHHHHHHH
Confidence 5555666667888888888888999999998899999999998776555 45555555555 9999998764 4555555
Q ss_pred HHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch--hhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075 269 GICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY--GSVYAIGDVAFCLGFAIGPAMSGTLVNT 346 (414)
Q Consensus 269 ~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~~~~g~~ig~~~~g~l~~~ 346 (414)
.++...+.+.++.+.+.+...+.+...+...+.... ...+..+++.| +...+..+....+|..++|++.+.+.++
T Consensus 93 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~~l~~~ 169 (393)
T PRK15011 93 VLACTLFAWNRNYFVLLFVGVFLSSFGSTANPQMFA---LAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAYALAMG 169 (393)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHHHHHHHhhHHHHHH---HHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHHHHHHh
Confidence 566666666666665443333333322222222221 22333333323 3445777888899999999999999999
Q ss_pred hchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 347 IGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 347 ~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
.||+..|+..+...++..+..+...
T Consensus 170 ~gw~~~f~~~~~~~~~~~~~~~~~~ 194 (393)
T PRK15011 170 FSFTVMYLSAAVAFIVCGVMVWLFL 194 (393)
T ss_pred cChHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999988877766655544433
No 178
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=99.50 E-value=2.7e-12 Score=121.29 Aligned_cols=171 Identities=13% Similarity=0.145 Sum_probs=135.6
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~ 273 (414)
++.++..++...+.........|.+ ++++|.+..+.|+..+...++..++.+..|++.||+|||+.+..+..+.+++.+
T Consensus 5 ~~~~~~~f~~~G~~~~~~~~l~~~~-~~~~~~s~~~~g~l~s~~~~g~~i~~~~~g~l~~r~G~r~~~~~g~~l~~~g~~ 83 (410)
T TIGR00885 5 FALITSLFALWGFANDITNPMVPQF-QQAFTLTAFQAALVQSAFYGGYFIMAIPAAIFMKKLSYKAGILLGLFLYALGAF 83 (410)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHH
Confidence 4555666666666666666777775 666899999999999999999999999999999999999999999999999877
Q ss_pred Hhhhh---hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-----
Q psy14075 274 MIPLA---RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN----- 345 (414)
Q Consensus 274 ~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~----- 345 (414)
++... ++.+.+....++.|++.+...+...+. ..+..|++++++..++.+....+|..++|.+.+.+..
T Consensus 84 l~~~~~~~~~~~~~l~~~~l~G~g~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~lG~~~g~~i~~~l~~~~~~~ 160 (410)
T TIGR00885 84 LFWPAAEIMNYTLFLVGLFILTAGLGFLETAANPY---ILVMGPESTATRRLNLAQSFNPFGSIIGMVVAQQLILSNLPH 160 (410)
T ss_pred HHHHHHhhccHHHHHHHHHHHHhhHHHHHhhhhHH---HHHHCCHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 75443 456677778888999999887766655 3345567778999999999999999999999988742
Q ss_pred ---------------------hhchHHHHHHHHHHHHHHHHHHH
Q psy14075 346 ---------------------TIGFEWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 346 ---------------------~~g~~~~~~~~~~~~~~~~~~~~ 368 (414)
..+|+.+|.+.+++.++..++..
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~w~~~fl~~a~~~~~~~~~~~ 204 (410)
T TIGR00885 161 QSQDVLDKLSPEELSAIKHSDLASVQTPYMIIGAVVLAVALLIM 204 (410)
T ss_pred chhhhhhhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 24588899888776665544433
No 179
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=99.49 E-value=5.1e-12 Score=117.02 Aligned_cols=158 Identities=12% Similarity=0.095 Sum_probs=133.8
Q ss_pred hchHHHHHHHhCCCccc-hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHH
Q psy14075 213 PSLPIWMMDTMGADKWQ-QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGL 291 (414)
Q Consensus 213 ~~~~~~~~~~~g~~~~~-~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~ 291 (414)
.+...++.+.+|++..+ .|.+......+..+..+..|++.||+|.|+++..+.+..++..+++++.++...+.+.-+++
T Consensus 46 s~a~p~L~~elglT~~qv~G~I~s~F~ysYal~qIp~GlLaDrlG~K~vL~l~~l~Wsl~t~L~~fa~Sl~~L~i~R~ll 125 (511)
T TIGR00806 46 SFITPYLLTVLNFTEETVTNEIIPVLPYSHLAVLVPVFLLTDYLRYKPVLVLQALSFVCVWLLLLLGTSVWHMQLMEVFY 125 (511)
T ss_pred HHHHHHHHHHcCCCHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444666679999999 99999999999999999999999999999999999999999999999998888899999999
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHH---HHHHHHHHHHHHHHHHH
Q psy14075 292 GFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEW---MLFIIAILDFMYAPLLY 368 (414)
Q Consensus 292 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~---~~~~~~~~~~~~~~~~~ 368 (414)
|++.+... +...++..-+|+++|+++.|+.+....+|.++++++.++ ...+||+. ..++......+++++.+
T Consensus 126 GvaEA~~~----A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql-l~s~gWr~y~~Ln~Isl~s~~~a~~~a~ 200 (511)
T TIGR00806 126 SVTMAARI----AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL-LVTLGWISYSTLNIISLVFMTFSVFLAL 200 (511)
T ss_pred HHHHHHHH----HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHhcCchhHHHHHHHHHHHHHHHHHHHH
Confidence 99998875 334457788999999999999999999999999999999 55677654 44555666677777777
Q ss_pred HhcCCCc
Q psy14075 369 LLRNPPT 375 (414)
Q Consensus 369 ~~~~~~~ 375 (414)
++++.++
T Consensus 201 ~LP~~~~ 207 (511)
T TIGR00806 201 FLKRPKR 207 (511)
T ss_pred hCCCCch
Confidence 8775544
No 180
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=99.49 E-value=6.9e-13 Score=127.92 Aligned_cols=156 Identities=15% Similarity=0.108 Sum_probs=122.9
Q ss_pred hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh-----hhhhHHHH
Q psy14075 211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL-----ARNINHLI 285 (414)
Q Consensus 211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~ 285 (414)
+....|.+. +++|.+..+.|++.+.+.++..++.++.|+++||+|+|+++..+.++.+++.+.+.. .++.+.+.
T Consensus 48 ~~~~~~~i~-~~~~~s~~~~g~~~s~~~~~~~~~~~~~G~l~Dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 126 (467)
T PRK09556 48 FKAAQNDMI-STYGLSTTELGMIGLGFSITYGVGKTLVGYYADGKNTKQFLPFLLILSAICMLGFGASLGSGSVSLGLMI 126 (467)
T ss_pred hhhhhHHHH-HhcCCCHHHHHHHHHHHHHHHHHHHhhhhhHhhccCccchHHHHHHHHHHHHHHHHHHHhcccchHHHHH
Confidence 444566644 558999999999999999999999999999999999999988887777766555544 46777777
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh---chHHHHHHHHHHHHH
Q psy14075 286 VPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI---GFEWMLFIIAILDFM 362 (414)
Q Consensus 286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~---g~~~~~~~~~~~~~~ 362 (414)
+..++.|++.+...+... ..+.+.+|+++||+++|+.+....+|..+++.+..++.+.. +|+..|.+.++..++
T Consensus 127 ~~r~l~G~~~~~~~~~~~---~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~~~~~~~~~~~~~~~~f~~~g~~~~~ 203 (467)
T PRK09556 127 ALWALSGFFQSTGGPCSY---STITRWTPRRKRGRFLGFWNISHNLGGAGAGGVALWGANYFFDGHVIGMFIFPSIIALI 203 (467)
T ss_pred HHHHHHHHHHhccchHHH---HHHHHHcCccceeeeEEeeecccchhhhHHHHHHHHHHHhhccCcchhHHHHHHHHHHH
Confidence 788888888887755443 34778889999999999999999999999999988777653 478888776766665
Q ss_pred HHHHHHHh
Q psy14075 363 YAPLLYLL 370 (414)
Q Consensus 363 ~~~~~~~~ 370 (414)
..++.++.
T Consensus 204 ~~i~~~~~ 211 (467)
T PRK09556 204 IGFIGLRY 211 (467)
T ss_pred HHHHHHHh
Confidence 55544444
No 181
>KOG3762|consensus
Probab=99.49 E-value=7.3e-13 Score=122.05 Aligned_cols=186 Identities=15% Similarity=0.126 Sum_probs=149.8
Q ss_pred hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHH
Q psy14075 187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLL 266 (414)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 266 (414)
+++.+++..++.+...+..++.....+++--++++ .+..+..-|......-.+.++.-++.+++.+|+|+.+++..++.
T Consensus 366 ~~~~s~~~llff~~av~mG~g~~lv~tFLfWHled-~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa 444 (618)
T KOG3762|consen 366 KVFASPHILLFFFVAVVMGAGVGLVFTFLFWHLED-LGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLA 444 (618)
T ss_pred HHhcCCCEEehhHHHHHHHHHHHHHHHHHHHHHhh-cCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhh
Confidence 45566666555555666666666666777666776 57677777877777788888889999999999999999999999
Q ss_pred HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHH-HHHHhHHHHHHHHHHh
Q psy14075 267 IIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAF-CLGFAIGPAMSGTLVN 345 (414)
Q Consensus 267 ~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~-~~g~~ig~~~~g~l~~ 345 (414)
+..+=++.+....|+|..+..-++-|+..+..+.. ..+++....|++.+.++.++..... .+|-.+|..++|.+.+
T Consensus 445 ~~~~Rf~~~S~L~n~W~vLPieilqgit~aliWaa---~~sY~s~vaPp~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~ 521 (618)
T KOG3762|consen 445 CNVGRFLYYSYLQNPWMVLPIEILQGITHALIWAA---IISYASHVAPPGLRATAQGLLQGIFHGLGKGLGSLIGGFVVE 521 (618)
T ss_pred HHHHHHHHHHHhcCchheeeHHHHHHHHHHHHHHH---HHHHHHhhCCCcchHHHHHHHHHHhcccCcchhhhhhhhhhe
Confidence 99999999999999999999999999999988554 4456778888999999999976544 7899999999999999
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075 346 TIGFEWMLFIIAILDFMYAPLLYLLRNPPTK 376 (414)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (414)
.+|-+..|...++.+++.++....+.+..++
T Consensus 522 ~fg~~ttf~~~giAcl~~l~~~~~iq~~l~~ 552 (618)
T KOG3762|consen 522 RFGARTTFRIFGIACLVTLALFISIQLLLKR 552 (618)
T ss_pred eehhHHHHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 9999999998888888877766665544333
No 182
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=99.49 E-value=5.2e-13 Score=123.57 Aligned_cols=150 Identities=26% Similarity=0.346 Sum_probs=138.4
Q ss_pred chhhhhhh-cCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCch-hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 18 RENRHKYL-MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSL-PMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 18 ~~~~~~~~-g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~-~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
.|.+.++. |.++.+.++..+...++..++.++.|++.||+|||+ .+..+..+..++.+...+.++.+.+.+..++.|+
T Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~ 277 (352)
T cd06174 198 LPLYLQEVLGLSAAEAGLLLSLFGLGGILGALLGGLLSDRLGRRRLLLLIGLLLAALGLLLLALAPSLALLLVALLLLGF 277 (352)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 34555554 899999999999999999999999999999999999 9999999999999999999999999999999999
Q ss_pred hhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHH
Q psy14075 96 GSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQL 168 (414)
Q Consensus 96 ~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~ 168 (414)
+.+...+...+++.|..| +++|++.+++.+...++|..+++.+.+.+.+..+|+..|.+.+++.++..+...
T Consensus 278 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~~~i~g~l~~~~~~~~~~~~~~~~~~i~~i~~~ 349 (352)
T cd06174 278 GLGFAFPALLTLASELAP-PEARGTASGLFNTFGSLGGALGPLLAGLLLDTGGYGGVFLILAALALLAALLLL 349 (352)
T ss_pred HHhccchhHHHHHHhhcC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHHHHHHHHHHHhe
Confidence 999999999999999999 499999999999999999999999999999989999999999999888766554
No 183
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=99.47 E-value=2.6e-12 Score=120.82 Aligned_cols=177 Identities=14% Similarity=0.016 Sum_probs=131.4
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC 271 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~ 271 (414)
|.++...+.....+.....+....+.+-++.+|+|+.|.+++.++..++..+.++..|++.||+|.|++..++..+..+.
T Consensus 34 r~l~~s~~~f~~~F~~w~~~~~l~~~~~~~~~~ls~~q~g~l~ai~~l~~al~rip~G~l~Dr~G~R~v~~~~~ll~~i~ 113 (462)
T PRK15034 34 RNLWISVSCLLLAFCVWMLFSAVTVNLNKIGFNFTTDQLFLLTALPSVSGALLRVPYSFMVPIFGGRRWTVFSTAILIIP 113 (462)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChHHHHHHHHHHHHH
Confidence 56666666666666666666665666555469999999999999999999999999999999999999999999998888
Q ss_pred HHHhhhh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH--
Q psy14075 272 LMMIPLA-----RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV-- 344 (414)
Q Consensus 272 ~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~-- 344 (414)
.+...+. ++++.+++..++.|++ +..+ .+....+.+.+|+++||++.|+.....++|..+++.+...+.
T Consensus 114 ~~~~~~a~~~~~~s~~~lli~r~l~Gig-g~~f---~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~p~~i~~ 189 (462)
T PRK15034 114 CVWLGIAVQNPNTPFGIFIVIALLCGFA-GANF---ASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVAPLVIFV 189 (462)
T ss_pred HHHHHHHHcccCCCHHHHHHHHHHHHHH-HHhH---HHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 8877765 6777888888888886 4443 333445667789999999999997777777776666655433
Q ss_pred ---h-------------hhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 345 ---N-------------TIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 345 ---~-------------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
+ ..+++++..+.....++..++.++..+
T Consensus 190 ~l~~~~G~~~~~~~~g~~~~~~~~~~~~~~~~iv~~i~~~~~~~ 233 (462)
T PRK15034 190 PVFAFLGVNGVPQADGSVMSLANAAWIWVPLLAIATIAAWSGMN 233 (462)
T ss_pred HHHHHhccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 2 234666666666666665555555433
No 184
>KOG1330|consensus
Probab=99.47 E-value=4.8e-14 Score=127.81 Aligned_cols=180 Identities=14% Similarity=0.183 Sum_probs=152.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~ 273 (414)
...+++...+...--+.+-..++. .++.++.++...|++.....+...+++++.|++.||++|++++.+|..+..++.+
T Consensus 35 l~il~~vnlmny~Dr~~iagv~~~-v~~~fni~~s~~Gll~~vf~v~~~i~sPl~gyLadryNR~~v~~vG~~iW~~Av~ 113 (493)
T KOG1330|consen 35 LVILCLVNLMNYADRYTIAGVLKE-VQTYFNISDSELGLLQTVFIVVFMIASPLFGYLADRYNRKRVIAVGIFIWTLAVF 113 (493)
T ss_pred HHHHHHHHHHHHhhhhhhhhhhHH-HHHhcCCCchhccchhHHHHHHHHHHHHHHHHHHhhcCcceEEeeHHHHHHHHHH
Confidence 344455555555555554444444 4556899999999999999999999999999999999999999999999999999
Q ss_pred HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-hHHH
Q psy14075 274 MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-FEWM 352 (414)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-~~~~ 352 (414)
...+..+.|.+.+.-.+.|+|.....+..++. +.|.+|.++|++.+++.+....+|..+|-...+.+.+..+ |+++
T Consensus 114 ~~~fs~~Fwq~~l~R~~vGiGeAs~~~ia~s~---IaD~f~~~~Rs~~~~ify~~ipvGsglG~vvgs~va~~~~~Wr~a 190 (493)
T KOG1330|consen 114 ASGFSNHFWQVLLCRGFVGIGEASYSPIAPSL---IADSFPDDKRSRVLGIFYFAIPVGSGLGYVVGSVVASLTFWWRWA 190 (493)
T ss_pred HHHHHHHHHHHHHHHHHhccchhhhcccchhH---hhhcCcchhhhHHHHHhhhhcccccceeEEeeeeeccCccceEEE
Confidence 99999999999999999999999988777765 6788999999999999999999999999999888888887 9999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075 353 LFIIAILDFMYAPLLYLLRNPPTKE 377 (414)
Q Consensus 353 ~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (414)
|...+++.++..++.+++.++++++
T Consensus 191 f~~~avl~vi~~~L~~~f~~eP~rg 215 (493)
T KOG1330|consen 191 FRGSAVLGVIVGLLVFLFVREPERG 215 (493)
T ss_pred EEeehHHHHHHHHHHHhhccCcccc
Confidence 9999999988888777766655543
No 185
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=99.47 E-value=1.6e-12 Score=122.09 Aligned_cols=145 Identities=14% Similarity=0.173 Sum_probs=131.9
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhh
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSS 98 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~ 98 (414)
|.+.+|+|.++.++|++.+...++..+..++.+++.||+|+|+.+.++.+...+..++.+++++.+.+++.+++.|+..+
T Consensus 229 ~~~l~~~g~s~~~~g~l~~~~~~~~i~~~~~~~~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~q~l~g~~~~ 308 (382)
T TIGR00902 229 AIYWQAAGISASATGLLWGIGVLAEIIIFAFSNKLFQNCSARDLLLISAIACVGRWAIIGAIEAFPLIFLLQILHCGTFA 308 (382)
T ss_pred HHHHHHCCCCHhHHHHHHHHHHHHHHHHHHHhHHHHhhCCHHHHHHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHHHHH
Confidence 55667899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHhhcCCCcchhhHHHHHHH-HHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHH
Q psy14075 99 CSSVSGMGMLAERYPDDRERGNAMGIAL-GGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLL 166 (414)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~~r~~~~~~~~-~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~ 166 (414)
...+....++.+. | +++|++..++++ ...++|..+++.++|.+.+++|+ ..|++.+.+.++..++
T Consensus 309 ~~~~~~~~~i~~~-~-~~~~~~~q~~~~~~~~g~g~~~g~~~~G~l~~~~g~-~~~~~~~~~~~~~~~~ 374 (382)
T TIGR00902 309 VCHLAAMRYIAAQ-P-GSEIAKLQALYNALAMGGLIAIFTAFAGFIYPTLGA-GTFVFMAIIAAAAFFL 374 (382)
T ss_pred HHHHHHHHHHHhC-C-HhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccH-HHHHHHHHHHHHHHHH
Confidence 9999999999998 8 489999999986 57889999999999999999986 6688888877765444
No 186
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=99.45 E-value=6.7e-12 Score=122.18 Aligned_cols=148 Identities=17% Similarity=0.111 Sum_probs=117.0
Q ss_pred CCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh------hHHHHHHHHHHHHHHHhh
Q psy14075 225 ADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARN------INHLIVPNAGLGFAIGMV 298 (414)
Q Consensus 225 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~------~~~~~~~~~~~g~~~~~~ 298 (414)
.+..+.+++.+...++.+++.++.|+++||+|||+.+..+.++..++.++....++ .+.+.+..++.|++.+..
T Consensus 53 ~~~~~~~~~~~~~~ig~~ig~~~~g~l~d~~Grr~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~g~~ 132 (502)
T TIGR00887 53 LPSSVSAAVNGSASIGTLAGQLFFGWLADKLGRKRVYGMELIIMIIATVASGLSPGSSPKSVMATLCFWRFWLGVGIGGD 132 (502)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHccCcccchHHHHHHHHHHHHHHHHhhh
Confidence 34556788899999999999999999999999999999998888888777666543 456777888889988887
Q ss_pred hhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-----------------------hhchHHHHHH
Q psy14075 299 DSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-----------------------TIGFEWMLFI 355 (414)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-----------------------~~g~~~~~~~ 355 (414)
.+... .+..|..|++.||++.++.+....+|..+++.+...+.. ..+|+..+.+
T Consensus 133 ~~~~~---~~~~e~~p~~~Rg~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~WR~~~~~ 209 (502)
T TIGR00887 133 YPLSA---IITSEFATKKWRGAMMAAVFAMQGFGILAGAIVALIVLAGFKHSLEAAADEASCTGSCVPAVDYMWRILIGF 209 (502)
T ss_pred hHHHH---HHHHHhcChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccccccccccccchhcccHHHHHHH
Confidence 55444 457899999999999999999999999999988776542 1379999977
Q ss_pred HHHHHHHHHHHHHHhcCCCc
Q psy14075 356 IAILDFMYAPLLYLLRNPPT 375 (414)
Q Consensus 356 ~~~~~~~~~~~~~~~~~~~~ 375 (414)
.++..++..+..+++++.++
T Consensus 210 ~~ip~~i~~~~~~~lpESpr 229 (502)
T TIGR00887 210 GAVPALLALYFRLTIPETPR 229 (502)
T ss_pred HHHHHHHHHHHHHhCCCCHH
Confidence 77666665555555665544
No 187
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=99.45 E-value=1.1e-12 Score=126.93 Aligned_cols=143 Identities=24% Similarity=0.303 Sum_probs=115.8
Q ss_pred ccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh---hhHHHHHHHHHHHHHHHhhhhhhh
Q psy14075 227 KWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR---NINHLIVPNAGLGFAIGMVDSSMM 303 (414)
Q Consensus 227 ~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~ 303 (414)
..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.++..... +.+.+++..++.|++.+...+...
T Consensus 70 ~~~~~~~~~~~~~~~~i~~~~~g~l~d~~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~G~~~~~~~~~~~ 149 (481)
T TIGR00879 70 SSLWGLVVSIFLVGGFIGALFAGWLSDRFGRKKSLLIIALLFVIGAILMGLAAFALSVEMLIVGRVLLGIGVGIASALVP 149 (481)
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHhhhhHHHhHHH
Confidence 78899999999999999999999999999999999999888888877765433 333567778888888887755433
Q ss_pred hhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHH---HHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 304 PELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMS---GTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 304 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~---g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
....|..|+++|+++.++.+....+|..+++.+. +...+..+|++.|.+.+...++..+..++.++
T Consensus 150 ---~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~w~~~f~~~~~~~~~~~~~~~~l~~ 218 (481)
T TIGR00879 150 ---MYLSEIAPKALRGALTSLYQLAITFGILVAYGFGSGKVSLNNTLGWRIPLGLQLIPAGLLFLGLFFLPE 218 (481)
T ss_pred ---HHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHHHHhhcCCCCccHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 3467888899999999999999999999999998 66667789999999876666665555545544
No 188
>PRK10133 L-fucose transporter; Provisional
Probab=99.44 E-value=1.5e-11 Score=117.26 Aligned_cols=147 Identities=12% Similarity=0.131 Sum_probs=119.1
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM 273 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~ 273 (414)
+....+.++...+.........|.+ ++.+|.++.+.++..+.+.++..++.++.|++.||+|||+.+..+..+..++.+
T Consensus 28 ~~~~~~~~~~~~~~~~~~~~~~p~i-~~~~~~s~~~~gl~~~~~~~g~~i~~~~~g~l~dr~G~r~~l~~g~~~~~~~~~ 106 (438)
T PRK10133 28 FALLCSLFFLWAVANNLNDILLPQF-QQAFTLTNFQAGLIQSAFYFGYFIIPIPAGILMKKLSYKAGIITGLFLYALGAA 106 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHH
Confidence 3445555566666667777788886 677999999999999999999999999999999999999999999999999887
Q ss_pred Hh---hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075 274 MI---PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV 344 (414)
Q Consensus 274 ~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 344 (414)
++ ...++.+.+.+..++.|++.+...+...+.. .+..+++++....++.+....+|..++|.+.+.+.
T Consensus 107 l~~~~~~a~~~~~ll~~r~l~G~g~g~~~~~~~~~v---~~~~~~~~~~~~~s~~~~~~~~G~~~g~~~g~~l~ 177 (438)
T PRK10133 107 LFWPAAEIMNYTLFLVGLFIIAAGLGCLETAANPFV---TVLGPESSGHFRLNLAQTFNSFGAIIAVVFGQSLI 177 (438)
T ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhHHHHH---HHhCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 65 3456777788888999999998877666553 34445555566788999999999999999877654
No 189
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=99.42 E-value=8.9e-10 Score=100.92 Aligned_cols=310 Identities=14% Similarity=0.062 Sum_probs=220.9
Q ss_pred hhhhhh-hcCCcchHH-HHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 19 ENRHKY-LMGETKAVG-VMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 19 ~~~~~~-~g~s~~~~g-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
|.+.+. .|++..|+. -+.-...-.+....++...++|..+.|++++++.+...+...+.-+.++.+.+-+..+..|++
T Consensus 28 ~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~~q~~yg~~ 107 (412)
T PF01770_consen 28 PYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQLMQFFYGLA 107 (412)
T ss_pred HHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHHHHHHHHHH
Confidence 334443 788888774 456666677888999999999999999999999999999999999999999999999999998
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc--CChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV--GKTAPFLILSALALGDGLLQLLLLQPG 174 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~~~~ 174 (414)
.+.. .+..+++-...| +++-.++.+....+..+|-.++.++|..+...- +.+....+......+..+..+++++++
T Consensus 108 ~a~e-vay~sYiys~v~-~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~~~~~fLP~~~ 185 (412)
T PF01770_consen 108 TAAE-VAYYSYIYSVVD-KEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLALLIALFLPMPK 185 (412)
T ss_pred HHHH-HHHHHHheeecC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 8874 556788888888 499999999999999999999999999887643 344555555554445555555544322
Q ss_pred CC-----------------CCC-----CCC----------------------chhhhhccChHHHHHHHHHHHHHHHHHh
Q psy14075 175 VV-----------------KQE-----VEP----------------------PTLKSLVMDPYILIAAGAITFANTGIAM 210 (414)
Q Consensus 175 ~~-----------------~~~-----~~~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 210 (414)
+. .++ +++ +++++..++|.++...+-+.+...++..
T Consensus 186 ~S~~f~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~y~~~~ll~WSlWWa~atcgy~q 265 (412)
T PF01770_consen 186 RSLFFHRKPPAEQDANESESDKMNESPESSSSTEKSPSTESSSRKSVLRLLWKDFKSCYSNPRLLLWSLWWAFATCGYYQ 265 (412)
T ss_pred cccceeccCccccccccccccccccccccccccccCcccccchHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHhHHHH
Confidence 10 000 000 1134556788888877878888888888
Q ss_pred hhhchHHHHHHH--hCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhH--HHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14075 211 LEPSLPIWMMDT--MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY--LAALLGLLIIGICLMMIPLARNINHLIV 286 (414)
Q Consensus 211 ~~~~~~~~~~~~--~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 286 (414)
+..+.....++. -+-+..-.|..-+...+.+.++.+..|++..++.+. ..+.....+.+..++++.+.++.|....
T Consensus 266 v~nYvQ~LW~~v~~~~~~~vYNG~VeA~~tllgA~~al~~g~v~~~w~~~~~l~l~~~S~l~a~~L~lm~~t~~Iwv~Y~ 345 (412)
T PF01770_consen 266 VINYVQSLWDTVPPSDNESVYNGAVEAASTLLGAIAALLAGYVKVNWDRWGELALGVFSLLQAGLLFLMSFTGNIWVCYA 345 (412)
T ss_pred HHHHHHHHHHhcCCCCCCcccchHHHHHHHHHHHHHHHHHhHhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 877777766654 122333457777777888888888889986555553 3334445555666777788888888888
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHH
Q psy14075 287 PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGF 333 (414)
Q Consensus 287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~ 333 (414)
.-++++..+.+..+... ..++.....+..|..+|+.++...+-.
T Consensus 346 ~yIif~~~y~fliTiA~---~qIA~~l~~e~yaLVFGiNtf~Al~LQ 389 (412)
T PF01770_consen 346 GYIIFRSLYMFLITIAS---FQIAKNLSEERYALVFGINTFVALVLQ 389 (412)
T ss_pred HHHHHHHHHHHHHHHHH---HHHHHhccccceeeeeeeHHHHHHHHH
Confidence 88877777766543322 235555556777888888776544433
No 190
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=99.42 E-value=1.1e-11 Score=119.29 Aligned_cols=182 Identities=15% Similarity=0.173 Sum_probs=147.9
Q ss_pred hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHH
Q psy14075 187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLL 266 (414)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~ 266 (414)
..+|||.|..+.....+.+++......-.+-++.+ ..-|+...++......+..++..+++|.++||++||++++.+-.
T Consensus 5 aplr~~~Fr~lw~a~~iS~lG~~~~~va~~wlv~~-lt~S~~~valv~~a~~LP~~Llsl~aG~laDr~drrrili~~~~ 83 (524)
T PF05977_consen 5 APLRNRNFRRLWIAQLISNLGDWMQTVALAWLVTQ-LTGSPLMVALVQAASTLPILLLSLFAGALADRFDRRRILILSQL 83 (524)
T ss_pred ccccCchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHHHH
Confidence 45889999999999999888888877777766665 56788889999999999999999999999999999999998887
Q ss_pred HHHHHHHHhhhh-----hhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHH
Q psy14075 267 IIGICLMMIPLA-----RNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSG 341 (414)
Q Consensus 267 ~~~i~~~~~~~~-----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g 341 (414)
+.++..+.+... .+.+.+++..++.|++..+..|...+. +.+..|+++...++++.+...++...+||.++|
T Consensus 84 ~~~~~~~~L~~l~~~~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~---ip~lV~~~~L~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 84 LRALVALLLAVLAFFGLLSPWLLLILTFLLGIGSAFFNPAWQAI---IPELVPKEDLPAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHHHHHhCcCCHHHHHHHHHHHHHHHHHHHHHHHHH---HHHhccHhhHHHHHHHHHHHHHHHHhccchHHH
Confidence 776554433321 356677778888888888887766655 556677888899999999999999999999999
Q ss_pred HHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 342 TLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 342 ~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
.+....|..++|.+.++..++........++
T Consensus 161 ~Lva~~G~~~~f~inalsfl~~i~~l~~~~~ 191 (524)
T PF05977_consen 161 ILVAFFGAAAAFLINALSFLISILALLRWKP 191 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 9999999999999888877776555444443
No 191
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=99.42 E-value=3.5e-12 Score=117.48 Aligned_cols=192 Identities=14% Similarity=0.144 Sum_probs=159.8
Q ss_pred hhhhccCh-HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhC----CCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhH
Q psy14075 185 LKSLVMDP-YILIAAGAITFANTGIAMLEPSLPIWMMDTMG----ADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRY 258 (414)
Q Consensus 185 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g----~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~ 258 (414)
.++.+++| .++.+...-+.--++++++...+..|+....+ ++..++.-++..+..-.-+..+++||++|| +|+|
T Consensus 13 ~~~~f~~Pr~l~~if~vE~WERFsyYGmraiL~~Yl~~~~~~gLg~~~~~A~~l~~~y~slVY~t~i~GG~laDr~LG~~ 92 (498)
T COG3104 13 EMKFFGQPRGLYLIFFVELWERFSYYGMRAILILYLYYQLGDGLGFDETHATGLFSAYGSLVYLTPIIGGWLADRVLGTR 92 (498)
T ss_pred ccccCCCCchHHHHHHHHHHHHHhhhhhHHHHHHHHHHhccccCCcChHhhHHHHHHHHHHHHHHHHHHHHHHHHhcchh
Confidence 34556655 56667777777889999999999999998888 999998888888887777889999999999 5999
Q ss_pred HHHHHHHHHHHHHHHHhhhhh--hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHH
Q psy14075 259 LAALLGLLIIGICLMMIPLAR--NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIG 336 (414)
Q Consensus 259 ~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig 336 (414)
+.+..+.++++++.+++.... +...+.+.+.+.++|.|..=+...+++...-+..+++ |-..+++.....++|+.++
T Consensus 93 ~tI~lGail~~iGh~~L~~~~~~~~~gl~i~L~~I~iG~Gl~K~NiS~llg~ly~~~Dpr-rD~gFt~fY~~iNiGsl~~ 171 (498)
T COG3104 93 RTIVLGAILMAIGHLVLAISSVSGPGGLYIGLALIIVGTGLFKPNISSLLGELYPKDDPR-RDGGFTLFYMGINIGSLIA 171 (498)
T ss_pred HHHHHHHHHHHHHHHHHhccccccccHHHHHHHHHHhccccccccHHHHHHHhcCCCCcc-cCCCccEEEEEeehHHHHH
Confidence 999999999999999998873 5667788888888999998887777666555444444 6678888888889999999
Q ss_pred HHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075 337 PAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKE 377 (414)
Q Consensus 337 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (414)
|.+.+++.+++||+..|...++...++++..+..++..+..
T Consensus 172 p~i~~~~~~~~g~~~gF~~aavGm~~gl~~f~~~~r~~~~~ 212 (498)
T COG3104 172 PIITGLLAINYGWHVGFGLAAVGMIIGLVIFLLGRRHVKGI 212 (498)
T ss_pred HHHHHHHHHhhCHHHHHHHHHHHHHHHHHHHHHccchhcCC
Confidence 99999999999999999999999999998888887654443
No 192
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=99.41 E-value=1.1e-11 Score=120.17 Aligned_cols=155 Identities=15% Similarity=0.176 Sum_probs=117.6
Q ss_pred hhhh-hhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHH---HHhhhhHHHHHHHHHHHh
Q psy14075 19 ENRH-KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLI---FAFGRTYGVLFLARSLQG 94 (414)
Q Consensus 19 ~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~---~~~~~~~~~l~~~r~l~G 94 (414)
|.+. +++|.+..+.++..+...++..++.+..|+++||+|||+.+..+.++..++.+. ...+++...+++.+++.|
T Consensus 274 p~~l~~~~g~s~~~~~~~~~~~~~~~~~~~~~~g~l~dr~grr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 353 (490)
T PRK10642 274 PSYLSHNLHYSEDHGVLIIIAIMIGMLFVQPVMGLLSDRFGRRPFVILGSVALFVLAIPAFILINSNVIGLIFAGLLMLA 353 (490)
T ss_pred HHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHH
Confidence 4444 567888888888888889999999999999999999999988877654433322 223456778888999999
Q ss_pred hhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-CChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075 95 IGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGLLQLLLLQP 173 (414)
Q Consensus 95 ~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~ 173 (414)
++.+........++.+.+|+ +.|+++++.......++..++|.+.+++.+.. +|+.+++...+.+++..+..++. ||
T Consensus 354 ~~~~~~~g~~~~~~~~~~p~-~~Rg~~~g~~~~~~~~~g~~~p~i~g~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~-pe 431 (490)
T PRK10642 354 VILNCFTGVMASTLPAMFPT-HIRYSALAAAFNISVLVAGLTPTLAAWLVESTQNLMMPAYYLMVVAVIGLITGVTM-KE 431 (490)
T ss_pred HHHHHHHHHHHHHHHHHCCC-ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchHHHHHHHHHHHHHHHHHHHh-cc
Confidence 88777777777888999995 99999999754445566788899999888764 47878777777766666655544 55
Q ss_pred CC
Q psy14075 174 GV 175 (414)
Q Consensus 174 ~~ 175 (414)
++
T Consensus 432 s~ 433 (490)
T PRK10642 432 TA 433 (490)
T ss_pred cc
Confidence 43
No 193
>PRK11010 ampG muropeptide transporter; Validated
Probab=99.41 E-value=4.7e-11 Score=115.56 Aligned_cols=153 Identities=14% Similarity=0.075 Sum_probs=121.6
Q ss_pred hhhhhhhcCCcchHHHHHH-HHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHH---Hhh-hhHHHHHHHHHHH
Q psy14075 19 ENRHKYLMGETKAVGVMFG-SKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF---AFG-RTYGVLFLARSLQ 93 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s-~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~---~~~-~~~~~l~~~r~l~ 93 (414)
|.+.+++|.++.+.+++.. ...++..++.++.|+++||+|+||.+.++.++.+++.++. +.. ++.+.+.+.-+++
T Consensus 247 ~~l~~~~G~s~~~~g~~~~~~g~i~~iiG~ll~G~L~dr~g~~~~l~i~~~l~~l~~l~~~~l~~~~~~~~~l~~~~~l~ 326 (491)
T PRK11010 247 TFLIRGVGFDAGEVGLVNKTLGLLATIVGALYGGILMQRLSLFRALMIFGILQGVSNAGYWLLSITDKNLYSMGAAVFFE 326 (491)
T ss_pred HHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHH
Confidence 3345678999999999974 6668999999999999999999998877666555544332 333 4555555566666
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
.++.+...+...++..+..+ ++.+++..++.+...++|..+++++.|.+.+..||+..|.+.++++++..+...+.++
T Consensus 327 ~~~~g~~~~~~~a~~~~l~~-~~~~~t~~gl~~s~~~lg~~~~~~~~G~l~~~~G~~~~f~~~~~~~l~~l~~~~~~~~ 404 (491)
T PRK11010 327 NLCGGMGTAAFVALLMTLCN-KSFSATQFALLSALSAVGRVYVGPVAGWFVEAHGWPTFYLFSVAAAVPGLLLLLVCRQ 404 (491)
T ss_pred HHHHHHHHHHHHHHHHHHcC-CCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHh
Confidence 66666666777888889998 4899999999999999999999999999999999999999999998887777666543
No 194
>PRK09952 shikimate transporter; Provisional
Probab=99.40 E-value=4.3e-11 Score=114.43 Aligned_cols=164 Identities=15% Similarity=0.172 Sum_probs=116.4
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHh--CCCccchhhHh-----HHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHH
Q psy14075 195 LIAAGAITFANTGIAMLEPSLPIWMMDTM--GADKWQQGVSF-----LPASISYLIGTNLFGPLGHRMGRYLAALLGLLI 267 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~g~~~-----~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 267 (414)
....+..++...-...+....|.+..+.+ +.++. .+... ....++..++.++.|+++||+|||+.+..+..+
T Consensus 25 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~G~l~Dr~Grr~~l~~~~~~ 103 (438)
T PRK09952 25 LGSFAGAVVDWYDFLLYGITAALVFNREFFPQVSPA-MGTLAAFATFGVGFLFRPLGGVVFGHFGDRLGRKRMLMLTVWM 103 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcH-HHHHHHHHHHHHHHHHHhhHHHHHHHHHHhhccHHHHHHHHHH
Confidence 33444445544544444445555555544 56655 34432 233455678888999999999999999999999
Q ss_pred HHHHHHHhhhhhhhH--------HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075 268 IGICLMMIPLARNIN--------HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM 339 (414)
Q Consensus 268 ~~i~~~~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~ 339 (414)
.+++.++..+.++.. .+.+.-++.|++.+...+... .+..|..|+++|+...+..+....+|..+++.+
T Consensus 104 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~---~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~~ 180 (438)
T PRK09952 104 MGIATALIGLLPSFSTIGWWAPVLLVTLRAIQGFAVGGEWGGAA---LLAVESAPKNKKAFYSSGVQVGYGVGLLLSTGL 180 (438)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHhhhcccHHHHH---HHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 999988888887755 355567778888887755433 457788999999999999888888888888777
Q ss_pred HHHHHh--------hhchHHHHHHHHHHHHH
Q psy14075 340 SGTLVN--------TIGFEWMLFIIAILDFM 362 (414)
Q Consensus 340 ~g~l~~--------~~g~~~~~~~~~~~~~~ 362 (414)
...+.. .+||+..|.+.++..++
T Consensus 181 ~~~l~~~~~~~~~~~~gWr~~f~~~~~~~l~ 211 (438)
T PRK09952 181 VSLISMMTTDEQFLSWGWRIPFLFSIVLVLI 211 (438)
T ss_pred HHHHHHhCCHHHhhccChHHHHHHHHHHHHH
Confidence 766543 47899999887665443
No 195
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=99.40 E-value=8e-12 Score=99.26 Aligned_cols=136 Identities=26% Similarity=0.368 Sum_probs=111.5
Q ss_pred HhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q psy14075 233 SFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDI 312 (414)
Q Consensus 233 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 312 (414)
......++..++.++.+++.||++||+.+..+.....++.+.....++.+......++.|++.+...+.... ...|.
T Consensus 3 ~~~~~~~~~~~~~~~~g~~~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~---~~~~~ 79 (141)
T TIGR00880 3 LLAGYALGQLIYSPLSGLLTDRFGRKPVLLVGLFIFVLSTAMFALSSNITVLIIARFLQGFGAAFALVAGAA---LIADI 79 (141)
T ss_pred EEEeehhHHHHHHhhHHHHHhhcchhHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHhHHH---HHHHH
Confidence 344567788899999999999999999999888888888777777777777777778888888776544433 46677
Q ss_pred ccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 313 RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 313 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
.|+++|++..++.+....+|..++|.+.+.+.+..+|+..+.+.+...++..+......
T Consensus 80 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (141)
T TIGR00880 80 YPPEERGVALGLMSAGIALGPLLGPPLGGVLAQFLGWRAPFLFLAILALAAFILLAFLL 138 (141)
T ss_pred CChhhhhHHHHHHHHhHHHHHHHhHHhHHHHhcccchHHHHHHHHHHHHHHHHHHhhcC
Confidence 88889999999999999999999999999999999999999888777777666555443
No 196
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=99.39 E-value=9.6e-12 Score=120.59 Aligned_cols=148 Identities=20% Similarity=0.278 Sum_probs=115.6
Q ss_pred CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh------------hhhHHHHHHHHHH
Q psy14075 224 GADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA------------RNINHLIVPNAGL 291 (414)
Q Consensus 224 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~------------~~~~~~~~~~~~~ 291 (414)
+.+..+.++..+...++..++.++.|+++||+|||+.+..+..+..++.+...+. .....+++.-++.
T Consensus 51 ~~~~~~~~~~~s~~~ig~~~~~~~~G~l~dr~Grr~~~~~~~~l~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~R~l~ 130 (479)
T PRK10077 51 SAANSLLGFCVASALIGCIIGGALGGYCSNRFGRRDSLKIAAVLFFISALGSAWPEFGFTSIGPDNTGYVPEFVIYRIIG 130 (479)
T ss_pred cCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHHHHH
Confidence 7888899999999999999999999999999999999999988888776655442 1123445667888
Q ss_pred HHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH--------hhhchHHHHHHHHHHHHHH
Q psy14075 292 GFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV--------NTIGFEWMLFIIAILDFMY 363 (414)
Q Consensus 292 g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~--------~~~g~~~~~~~~~~~~~~~ 363 (414)
|++.+...+... .++.|..|+++||++.++.+....+|..+++.+.+.+. +..||++.|++.++..++.
T Consensus 131 G~~~g~~~~~~~---~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~~~gWr~~f~~~~~~~~~~ 207 (479)
T PRK10077 131 GIGVGLASMLSP---MYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYFVNYFIARSGDASWLNTDGWRYMFASEAIPALLF 207 (479)
T ss_pred hhhHhHHhhHHH---HHHHhhCChhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCcccccccCChHHHHHHHHHHHHHH
Confidence 888888765444 34778888999999999999988999988877665543 3468999999887777776
Q ss_pred HHHHHHhcCCC
Q psy14075 364 APLLYLLRNPP 374 (414)
Q Consensus 364 ~~~~~~~~~~~ 374 (414)
.+..+++++.+
T Consensus 208 ~~~~~~l~~s~ 218 (479)
T PRK10077 208 LMLLYFVPETP 218 (479)
T ss_pred HHHHHcCCCCc
Confidence 55555555443
No 197
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=99.38 E-value=5e-11 Score=113.90 Aligned_cols=160 Identities=14% Similarity=0.125 Sum_probs=112.0
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHhC---CCccch---hhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH
Q psy14075 200 AITFANTGIAMLEPSLPIWMMDTMG---ADKWQQ---GVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM 273 (414)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~g---~~~~~~---g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~ 273 (414)
..++.......+....| ++.++++ .+..+. +..+....++..+++++.|+++||+|||+.+..+..+.+++.+
T Consensus 30 ~~~~~~~d~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~~~~G~l~Dr~Grr~~l~~~~~~~~~~~~ 108 (432)
T PRK10406 30 GNLVEWFDFYVYSFCSL-YFAHIFFPSGNTTTQLLQTAGVFAAGFLMRPIGGWLFGRIADKHGRKKSMLISVCMMCFGSL 108 (432)
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHhCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHH
Confidence 34444455445444444 4555553 344332 3344455566669999999999999999999999999999888
Q ss_pred HhhhhhhhH--------HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH-
Q psy14075 274 MIPLARNIN--------HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV- 344 (414)
Q Consensus 274 ~~~~~~~~~--------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~- 344 (414)
...+.++.. .+.+.-++.|++.|...+... +++.|..|+++||+..++.+.....|..+++.+...+.
T Consensus 109 ~~~~~~~~~~~~~~~~~~l~~~R~l~G~g~g~~~~~~~---~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~~~~~~~~~ 185 (432)
T PRK10406 109 VIACLPGYETIGTWAPALLLLARLFQGLSVGGEYGTSA---TYMSEVAVEGRKGFYASFQYVTLIGGQLLALLVVVVLQQ 185 (432)
T ss_pred HHhhcCCchhHHHHHHHHHHHHHHHHHhhhhhhHhhHH---HHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 877766532 456677788888887755444 45778889999999999887777777777776655443
Q ss_pred -------hhhchHHHHHHHHHHHHHH
Q psy14075 345 -------NTIGFEWMLFIIAILDFMY 363 (414)
Q Consensus 345 -------~~~g~~~~~~~~~~~~~~~ 363 (414)
+.+||+..|.+.++..++.
T Consensus 186 ~~~~~~~~~~gWr~~F~i~~~~~ll~ 211 (432)
T PRK10406 186 TLEDAELREWGWRIPFALGAVLAVVA 211 (432)
T ss_pred hCCHHHHhccchHHHHHHHHHHHHHH
Confidence 2579999998876655543
No 198
>KOG3764|consensus
Probab=99.38 E-value=2.9e-12 Score=113.95 Aligned_cols=152 Identities=22% Similarity=0.366 Sum_probs=135.2
Q ss_pred hCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhh
Q psy14075 223 MGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSM 302 (414)
Q Consensus 223 ~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 302 (414)
.+.+..+.|+++....+.+++.+++.|.+.||+|+|..+++|+..+..+.+++.+.++++.+.++-.+.|++..+.....
T Consensus 101 ~~~e~~~iG~LFaskA~~qllvnp~~G~l~~~iGy~ipm~~Gl~vmf~sTilFafg~sy~~l~vAR~LQgvgsA~~~tsg 180 (464)
T KOG3764|consen 101 LDRENTQIGLLFASKALVQLLVNPFFGNLIDRIGYKIPMVAGLFVMFLSTILFAFGNSYPMLFVARSLQGVGSAFADTSG 180 (464)
T ss_pred ccccccchhHHHHHHHHHHHHhcccchhhHHHhccccHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHhhhhHHHHHhhh
Confidence 45667789999999999999999999999999999999999999999999999999999999999999999999886554
Q ss_pred hhhhhhhhhccccc-chhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075 303 MPELGYLVDIRHTA-VYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKE 377 (414)
Q Consensus 303 ~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (414)
.+ .+++.+|++ +|++++|+.-.+..+|-.+||+++|.++|..|++..|.++++++++-..+.++..++.+.+
T Consensus 181 la---mlAd~f~~d~er~~vmGialgfislG~lvgPpfGGilYe~~Gk~aPFlVL~~v~Lld~~L~l~vi~p~~~~ 253 (464)
T KOG3764|consen 181 LA---MLADVFPEDNERGSVMGIALGFISLGVLVGPPFGGILYEFAGKSAPFLVLAIVLLLDGALQLLVIEPTEMD 253 (464)
T ss_pred HH---HHHHHcccchhhhHHHHHHHHHHhccceecCCcccchHhhcCCcCcHHHHHHHHHHHHHHHHheeCccccC
Confidence 44 466777766 4799999999999999999999999999999999999999999999888887776654443
No 199
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=99.37 E-value=3.8e-12 Score=122.86 Aligned_cols=148 Identities=17% Similarity=0.227 Sum_probs=120.9
Q ss_pred HhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh--hhhHHHHHHHHHHHHHHHhhh
Q psy14075 222 TMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA--RNINHLIVPNAGLGFAIGMVD 299 (414)
Q Consensus 222 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~g~~~~~~~ 299 (414)
+++++..+.|.+.+.+.++..+++++.|++.||+|+|+.+..+.++..++.++..+. .+.+.+++..++.|++.+...
T Consensus 70 ~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~r~~~G~~~~~~~ 149 (465)
T TIGR00894 70 NFKWSGALQGLILSSHFYGQIIIQIPVGYLAGKYVFKWSIGIGMFLSSVISIVIPWAAGGGIALVVFCRVIQGLAQGSVS 149 (465)
T ss_pred CCCCCHHHhhHHHHHHHHHHHHHHcchHHHHHHhCcchhhHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHHHHhcccch
Confidence 478899999999999999999999999999999999999999988888776665543 334556666777777777665
Q ss_pred hhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh-chHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 300 SSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI-GFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
+... ....+..|+++|+++.|+.+....+|..++|.+.+.+.+.. ||+..|++.++..++..++.+...+
T Consensus 150 ~~~~---~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~l~~~~~gw~~~f~i~~~~~~~~~~~~~~~~~ 220 (465)
T TIGR00894 150 PATH---KIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGWLCESWGGWPMIFYVFGIVGCAWSLLWFVFPA 220 (465)
T ss_pred hhHH---HHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCeehhhhhHHHHHHHHHHHHHhc
Confidence 4433 34678888999999999999999999999999999999984 9999999988877766655555443
No 200
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=99.37 E-value=3.3e-11 Score=113.22 Aligned_cols=156 Identities=15% Similarity=0.117 Sum_probs=112.9
Q ss_pred HHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhH----HHHHHHHHHHHHHHHHhh
Q psy14075 201 ITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRY----LAALLGLLIIGICLMMIP 276 (414)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~----~~~~~~~~~~~i~~~~~~ 276 (414)
.+....+......++|.|+++ +|.|..+.|+..+...+...++.++.|++.||++|+ +.+.+...+. ......
T Consensus 13 ~~~~~~~~g~~~p~l~~~l~~-~g~s~~~iG~~~~~~~l~~~l~~~~~g~l~dr~g~~~~~~~~~~~~~~~~--~~~~~~ 89 (382)
T PRK11128 13 YFGYFFAYGVFLPFWSVWLKG-QGYTPETIGLLLGAGLVARFLGSLLIAPRVKDPSQLIPALRLLALLTLLF--AVAFWF 89 (382)
T ss_pred HHHHHHHHHHHhhhHHHHHHh-cCCCHHHHHHHHHHHHHHHHhhhHHHHHHHhhhcchHHHHHHHHHHHHHH--HHHHHH
Confidence 555566677888899999977 699999999999999999999999999999999983 3322222111 122222
Q ss_pred hhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHH
Q psy14075 277 LARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFII 356 (414)
Q Consensus 277 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~ 356 (414)
..++.+.+.+...+.+++.+...+...... +.. .++|+++.+..+....+|..+||.+.+++.+++||+..|+..
T Consensus 90 ~~~~~~~l~i~~~l~g~~~~~~~~~~~a~~----~~~-~~~~~~a~~~~~~~~~lg~~igp~lgg~l~~~~g~~~~f~~~ 164 (382)
T PRK11128 90 GAHSFWLLFVAIGLFNLFFSPLVPLTDALA----NTW-QKQIGLDYGKVRLWGSIAFVIGSALTGKLVSWFGEQAILWIL 164 (382)
T ss_pred hcccHHHHHHHHHHHHHHHcccccHHHHHH----HHH-HhhccCCcchHHHHHHHHHHHHHHHHHHHHHHcChhHHHHHH
Confidence 345666666666667777666655433322 222 344678888888888999999999999999999999999877
Q ss_pred HHHHHHHH
Q psy14075 357 AILDFMYA 364 (414)
Q Consensus 357 ~~~~~~~~ 364 (414)
++..++..
T Consensus 165 ~~~~~~~~ 172 (382)
T PRK11128 165 TAGVASML 172 (382)
T ss_pred HHHHHHHH
Confidence 76554443
No 201
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=99.36 E-value=3.3e-11 Score=114.00 Aligned_cols=166 Identities=19% Similarity=0.171 Sum_probs=122.2
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh-----hhHH-HHHHHHHHHHHHHH
Q psy14075 200 AITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM-----GRYL-AALLGLLIIGICLM 273 (414)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~-~~~~~~~~~~i~~~ 273 (414)
.++.+.........-+|.|+++. |+|..+.|++...... .+..++.|+++||+ |||| .+..+..+.+++..
T Consensus 7 l~~~~~~~~~~~~~~~~~~l~~~-g~~~~~ig~~~~~~~~--~~~~~l~g~~~Dr~~~~~~g~rr~~l~~~~~~~~l~~~ 83 (402)
T PRK11902 7 LGFASGLPLALTSGTLQAWMTVE-GLDIQTIGFFSLVGQA--YIFKFLWAPLMDRYTPPLLGRRRGWLLLTQVGLAASIA 83 (402)
T ss_pred HHHHHhhhHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH--HHHHHHHHHHHHcccccCCCcchhHHHHHHHHHHHHHH
Confidence 34555666677778899999985 9999999998666554 57889999999999 6654 67777777777766
Q ss_pred Hhhhhh---hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh-hch
Q psy14075 274 MIPLAR---NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT-IGF 349 (414)
Q Consensus 274 ~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-~g~ 349 (414)
.+.+.+ +.+.+....++.++......+... +...|..|+++|+++.++......+|..+++.+.+.+.+. .||
T Consensus 84 ~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~~~l~~~~~gw 160 (402)
T PRK11902 84 AMAFCPPHAALWPLAGLAVLVAFLSASQDIVFD---AYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLALWLADRVLGW 160 (402)
T ss_pred HHHhcCccchHHHHHHHHHHHHHHHHHHHHHHH---HHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHHHHHHhcccCH
Confidence 666652 344444444455554444433333 4466788889999999999999999999999999999886 499
Q ss_pred HHHHHHHHHHHHHHHHHHHHhc
Q psy14075 350 EWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
+..|++.++..++..+.....+
T Consensus 161 ~~~f~i~a~~~l~~~l~~~~~~ 182 (402)
T PRK11902 161 GNTYLLMAGLMLAGALTTLWAP 182 (402)
T ss_pred HHHHHHHHHHHHHHHHHHHhcC
Confidence 9999998877766555443333
No 202
>PTZ00207 hypothetical protein; Provisional
Probab=99.32 E-value=2e-10 Score=111.28 Aligned_cols=158 Identities=12% Similarity=0.059 Sum_probs=114.1
Q ss_pred hhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhh------hhhHH
Q psy14075 210 MLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLA------RNINH 283 (414)
Q Consensus 210 ~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~------~~~~~ 283 (414)
.+..+.|. +++.+|++..+.+.+..... ......++.|++.||+|+|+++.++.++..++.++.+++ ++.+.
T Consensus 45 ~fsv~s~~-L~~~lgls~~~l~~i~svg~-~~g~~~lp~G~L~Dr~G~R~vllig~ll~~iG~ll~ala~~~~i~~s~~~ 122 (591)
T PTZ00207 45 AFNLISGA-MQARYNLTQRDLSTITTVGI-AVGYFLLPYSFIYDYLGPRPIFVLSMTVFCLGTLLFALTFQEVIEGSVVR 122 (591)
T ss_pred HHHHHHHH-HHHHhCcCHHHHHHHHHHHH-HHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHhcccccCcHHH
Confidence 44444554 56679999999888776533 333456678999999999999999999999999888876 46677
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy14075 284 LIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMY 363 (414)
Q Consensus 284 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~ 363 (414)
+.+..++.|++.+...+... ....+.+| ++||.+.|+......+|+++.+.+...+.+ .+++..|++.++..++.
T Consensus 123 l~l~r~l~G~G~~~~~~~~~---~~i~~~Fp-~~RG~a~Gi~~~~~gLGsaI~~~l~~~l~~-~~~~~~fl~l~vl~~vv 197 (591)
T PTZ00207 123 LSVYNGLMTLGCMLFDLGAV---VTVLSVFP-SNRGAVVAIMKTFTGLGSAILGSIQLAFFS-DNTSAYFFFLMSFALVV 197 (591)
T ss_pred HHHHHHHHHHHHHHHHHHHH---HHHHHhCh-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHHH
Confidence 77777788888766544333 23556675 678999999999999999865555544443 35777787777777776
Q ss_pred HHHHHHhcCCC
Q psy14075 364 APLLYLLRNPP 374 (414)
Q Consensus 364 ~~~~~~~~~~~ 374 (414)
.++...+.+.+
T Consensus 198 ~ll~~~~vr~p 208 (591)
T PTZ00207 198 GILAIVFMRLP 208 (591)
T ss_pred HHHHHhheeCC
Confidence 66655544433
No 203
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=99.32 E-value=7.7e-11 Score=109.61 Aligned_cols=148 Identities=18% Similarity=0.197 Sum_probs=116.4
Q ss_pred HhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHH
Q psy14075 209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPN 288 (414)
Q Consensus 209 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 288 (414)
......+|.+.+ ++|.+..+.++..+...++..++.++.|++.||+|||+.+..+.++..++.+.. ..++.+.+.+..
T Consensus 17 ~~~~~~lp~l~~-~~~~s~~~~g~~~s~~~~~~~~~~~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~-~~~~~~~l~~~~ 94 (355)
T TIGR00896 17 TSVGPLLPQIRS-ALGMSFSVAGLLTALPVLCFAVLAPLAPWLARRFGEERSVAAGLLLIAAGILIR-SAPGTALLFAGT 94 (355)
T ss_pred ccCcccHHHHHH-HhCCCHHHHHHHHHHHHHHHHHHHHhHHHHHHHhCchHHHHHHHHHHHHHHHHH-HhccHHHHHHHH
Confidence 445567777555 489999999999999999999999999999999999999999888877776665 556666667777
Q ss_pred HHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc--hHHHHHHHHHHHHH
Q psy14075 289 AGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG--FEWMLFIIAILDFM 362 (414)
Q Consensus 289 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--~~~~~~~~~~~~~~ 362 (414)
++.|++.+...+..... ..+..+ ++|+++.++.+....+|..+++.+.+.+.+..+ |+..|...++..++
T Consensus 95 ~~~g~g~~~~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~g~~i~~~~~~~l~~~~~~~w~~~f~~~~~~~~~ 166 (355)
T TIGR00896 95 ALIGVGIAIINVLLPSL---IKRDFP-QRVGLMTGLYSMALMGGAALAAAATVPLAQHSGGHWQQALAWWALPALL 166 (355)
T ss_pred HHHHHHHHHHhccchHH---HHHhCc-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHH
Confidence 78888877764443332 334444 578999999999999999999999999987653 88888766654443
No 204
>TIGR00898 2A0119 cation transport protein.
Probab=99.32 E-value=9.2e-12 Score=121.55 Aligned_cols=148 Identities=18% Similarity=0.316 Sum_probs=123.2
Q ss_pred HHHhCCC---ccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q psy14075 220 MDTMGAD---KWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIG 296 (414)
Q Consensus 220 ~~~~g~~---~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~ 296 (414)
.++++++ +.+.++..+...++.+++.++.|+++||+|||+.+..+.++..++.+...+.++.+.+.+..++.|++.+
T Consensus 116 ~~e~~l~c~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr~Grr~~~~~~~~~~~i~~~~~~~~~~~~~~~~~r~l~G~~~~ 195 (505)
T TIGR00898 116 VTEWDLVCEDAWKVDLTQSCFFVGVLLGSFVFGYLSDRFGRKKVLLLSTLVTAVSGVLTAFSPNYTVFLVFRLLVGMGIG 195 (505)
T ss_pred EEEecceechHHHHHHHHHHHHHHHHHHHHhHHHhhhhccchHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHhhcc
Confidence 3447887 7889999999999999999999999999999999999999999988888888888888888888888888
Q ss_pred hhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 297 MVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
...+... ....|..|++.|+.+.++......+|..++|.+.+.+.+ |++.+.+.++..++..+..++.++.
T Consensus 196 ~~~~~~~---~~~~e~~~~~~r~~~~~~~~~~~~~g~~~~~~~~~~~~~---wr~~~~~~~i~~~~~~~~~~~~~es 266 (505)
T TIGR00898 196 GIWVQAV---VLNTEFLPKKQRAIVGTLIQVFFSLGLVLLPLVAYFIPD---WRWLQLAVSLPTFLFFLLSWFVPES 266 (505)
T ss_pred chHHHHH---HHhheecChhhhHHHHHHHHHHHHHHHHHHHHHHHHhhH---HHHHHHHHHHHHHHHHHHHHhcCCC
Confidence 7644443 346788899999999999988889999998888766554 8999988887777766666555543
No 205
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=99.30 E-value=6.9e-11 Score=106.65 Aligned_cols=177 Identities=17% Similarity=0.123 Sum_probs=134.9
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC 271 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~ 271 (414)
|.++...+.....+.....+....+. +.+.+|+|+.|.+++.++..+.+.+.++..|.+.||+|.|++...+.++..+-
T Consensus 14 ~~L~~S~~af~v~F~VW~l~s~l~~~-i~~~~~LS~~q~~ll~aiPil~GallRl~~g~l~drfGgR~~~~~s~~l~~IP 92 (417)
T COG2223 14 RNLWLSTLAFDVGFMVWTLFSPLGVF-IKSDFGLSEGQKGLLVAIPILVGALLRLPYGFLTDRFGGRKWTILSMLLLLIP 92 (417)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-hccccCCCHHHHHHHHHHHHHHhHHHHHHHHhhhcccCchHHHHHHHHHHHHH
Confidence 44555555444444444444444443 45779999999999999999999999999999999999999999999998888
Q ss_pred HHHhhhhhhhH---HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc
Q psy14075 272 LMMIPLARNIN---HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG 348 (414)
Q Consensus 272 ~~~~~~~~~~~---~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g 348 (414)
.+.+.++.+.+ .+++..++.|++-+. +...+.++..-+|++++|.++|+.. ..|+|..+...+...+....|
T Consensus 93 ~~~~~~a~~~~~~~~ll~~gll~G~~Gas----Fav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P~v~~~~g 167 (417)
T COG2223 93 CLGLAFAVTYPSTWQLLVIGLLLGLAGAS----FAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAPLVAVAFG 167 (417)
T ss_pred HHHHHHHccCCchHHHHHHHHHHhcccce----ehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHHHHHHHHh
Confidence 88887765443 555555555554332 3344455778899999999999998 999999999999999999999
Q ss_pred ---hHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075 349 ---FEWMLFIIAILDFMYAPLLYLLRNPP 374 (414)
Q Consensus 349 ---~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (414)
|+.+..+.....++..+..++..++.
T Consensus 168 ~~~w~~~~~i~~~~l~v~~v~~~~~~~d~ 196 (417)
T COG2223 168 FLAWRNVAGIYVVALAIAAVLAWLGMNDV 196 (417)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Confidence 88888877777777666666554433
No 206
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=99.30 E-value=1.7e-11 Score=121.63 Aligned_cols=159 Identities=13% Similarity=0.150 Sum_probs=124.2
Q ss_pred hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-----------
Q psy14075 211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR----------- 279 (414)
Q Consensus 211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~----------- 279 (414)
....++. ++++++++..+.|++.+.+.++..++.++.+++.||.+||+.+.++.++++++.+++.+.+
T Consensus 52 ~~~~l~~-iek~F~lss~~~G~i~s~~~i~~~~~~i~v~~~~~r~~r~~~i~~g~ll~~lg~ll~alphf~~~~y~~~~~ 130 (633)
T TIGR00805 52 VNSSLTT-IERRFKLSTSSSGLINGSYEIGNLLLIIFVSYFGTKLHRPIVIGIGCAIMGLGSFLLSLPHFLSGRYSYSTT 130 (633)
T ss_pred HHhhchh-hhhhhCCCCCcceeeeehhhHHHHHHHHHHHHhhcccCcceEEEecHHHHHHHHHHHhChHHhcCCcccccc
Confidence 3334444 5667999999999999999999999999999999999999999999999999988776543
Q ss_pred ----------------------------------------hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchh
Q psy14075 280 ----------------------------------------NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYG 319 (414)
Q Consensus 280 ----------------------------------------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g 319 (414)
....+++..++.|++.+...+... +++.|..|+++|+
T Consensus 131 ~~~~~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~GiG~~~~~~~~~---~~i~d~~~~~~~~ 207 (633)
T TIGR00805 131 VSSTGNLSSANSFLCMENLTQALRPTQCPSECQKQHKESLMWLLFLVSQLLRGIGATPIFPLGI---SYIDDFAKSKNSP 207 (633)
T ss_pred ccccccccccccccccCCCCCCccccccccccccccCCCceehhhHHHHHHHhccCCcchhcCc---hhhhccCCccccH
Confidence 122345667777777766644443 4577888999999
Q ss_pred hHHhHHHHHHHHHHhHHHHHHHHHHhhh---------------------c-hHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 320 SVYAIGDVAFCLGFAIGPAMSGTLVNTI---------------------G-FEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 320 ~~~g~~~~~~~~g~~ig~~~~g~l~~~~---------------------g-~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
...|+.+....+|..+|+.+++++.+.+ | |+..|++.+++.++..+..+.++++
T Consensus 208 ~~~~i~~~~~~iG~~lG~llgg~l~~~~~d~~~~~~~~~~l~~~dprWiGaWwl~Fli~g~l~~l~~v~l~~~p~~ 283 (633)
T TIGR00805 208 LYIGILESIAVFGPAFGYLLGSFCLQIYVDTGSVNTEDVILTPTDPRWIGAWWIGFLICGGVALLTSIPFFFFPKA 283 (633)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHhcccccccCCCCCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHhCccc
Confidence 9999999999999999999999988643 2 5666777777777666555555543
No 207
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=99.30 E-value=1.3e-10 Score=124.43 Aligned_cols=184 Identities=10% Similarity=0.027 Sum_probs=124.8
Q ss_pred hhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCC-----ccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHH
Q psy14075 186 KSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGAD-----KWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLA 260 (414)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 260 (414)
+++++++++..+....++..+..+.....++.+.......+ ....++..+.+.+..++..++.|+++||++||++
T Consensus 5 ~~l~~~~~f~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~G~laDr~~rk~~ 84 (1140)
T PRK06814 5 LYLMKSRRFAPLFWTQFFGAFNDNFLKNALVILILYGLSGALGAYNNALVTLAGAVFILPFFIFSALAGQLADKYDKAKL 84 (1140)
T ss_pred hhhhhccccHHHHHHHHHhHHHHHHHHHHHHHHHHHHhccccccchHHHHHHHHHHHHHHHHHHhhhHHhhhhhccHHHH
Confidence 34677777776666666655554333222222211111111 1346677778888999999999999999999987
Q ss_pred HHHHHH---HHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHH
Q psy14075 261 ALLGLL---IIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGP 337 (414)
Q Consensus 261 ~~~~~~---~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~ 337 (414)
+..... ...+..+.....++.+.+++..++.|++.++..+...+. +.+..+++++++++|+.++...+|..+||
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~s~~~l~~~~~l~gi~~a~~~p~~~a~---l~~~~~~~~~~~a~~~~~~~~~ig~~igp 161 (1140)
T PRK06814 85 AKILKFAEIGIAALAIYGFHLNSVPLLFAALFLMGIHSALFGPIKYSI---LPDHLNKDELLGANALVEAGTFIAILLGT 161 (1140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhhchHHHHh---hHhhcCccccchhhHHHHHHHHHHHHHHH
Confidence 533211 211111222233678888888999999988886655544 66788889999999999999999999999
Q ss_pred HHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 338 AMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 338 ~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
.++|++.+..+|+..|...+++.+++.++.+.+++
T Consensus 162 ~l~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 196 (1140)
T PRK06814 162 IIGGLATISGNFVILVALLMGIAVLGWLASLFIPK 196 (1140)
T ss_pred HHHHHHHhccccHHHHHHHHHHHHHHHHHHhhCCC
Confidence 99999999999998885555555554444444443
No 208
>PRK15075 citrate-proton symporter; Provisional
Probab=99.30 E-value=2.2e-10 Score=109.49 Aligned_cols=161 Identities=13% Similarity=0.119 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHh-HHH-----HHHHHhhhhhhhhhhhhhhhHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSF-LPA-----SISYLIGTNLFGPLGHRMGRYLAALLGLLI 267 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~-~~~-----~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 267 (414)
.....+..++.......+....|...++ ++.++.+.+... +.. .+...++.++.|++.||+|||+.+..+..+
T Consensus 17 ~~~~~~~~~~~~~d~~~~~~~~~~i~~~-~~~~~~~~~~~~~~~~~~~~~~l~~~ig~~~~G~l~Dr~Grr~~l~~~~~~ 95 (434)
T PRK15075 17 ILRVTSGNFLEMFDFFLFGFYATAIAKT-FFPAGNEFASLMLTFAVFGAGFLMRPLGAIVLGAYIDRVGRRKGLIVTLSI 95 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCCchHHHHHHHHHHHHHHHHhhhHHHHHHHHhhhhchHHHHHHHHHH
Confidence 3445556666667777777778865554 787776654332 221 222346788999999999999999999999
Q ss_pred HHHHHHHhhhhhhhHH--------HHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075 268 IGICLMMIPLARNINH--------LIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM 339 (414)
Q Consensus 268 ~~i~~~~~~~~~~~~~--------~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~ 339 (414)
..++.++..+.++.+. +.+.-++.|++.+...+... .+..|..|+++|+++.++.+...++|..+++.+
T Consensus 96 ~~~~~~l~~~~~~~~~~~~~~~~~l~~~R~l~G~~~g~~~~~~~---~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~~ 172 (434)
T PRK15075 96 MASGTLLIAFVPGYATIGLAAPLLVLLGRLLQGFSAGVELGGVS---VYLAEIATPGRKGFYTSWQSASQQVAVVFAALL 172 (434)
T ss_pred HHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHhhccccccHHHHH---HHHHhhCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999888888876552 35556677777776644333 457788999999999999998888888888877
Q ss_pred HHHH--------HhhhchHHHHHHHHH
Q psy14075 340 SGTL--------VNTIGFEWMLFIIAI 358 (414)
Q Consensus 340 ~g~l--------~~~~g~~~~~~~~~~ 358 (414)
.+.+ .+..||++.|++...
T Consensus 173 g~~l~~~~~~~~~~~~gWr~~f~~~~~ 199 (434)
T PRK15075 173 GYLLNQWLSPAQMAEWGWRIPFLIGCL 199 (434)
T ss_pred HHHHHHhCCHHHHhccchHHHHHHHHH
Confidence 7765 356789999987543
No 209
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=99.28 E-value=3.3e-11 Score=113.47 Aligned_cols=142 Identities=18% Similarity=0.135 Sum_probs=114.7
Q ss_pred hhhh-hhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHH--HHHHh--hhhHHHHHHHHHHH
Q psy14075 19 ENRH-KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST--LIFAF--GRTYGVLFLARSLQ 93 (414)
Q Consensus 19 ~~~~-~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~--~~~~~--~~~~~~l~~~r~l~ 93 (414)
|.+. +++|.++.+.+.+.+...++..++.++.|+++||+|||+.+.....+..+.. +...+ .++.+.+....++.
T Consensus 243 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 322 (394)
T TIGR00883 243 PTYLTQTLGLSANSALLVLMLSLILFFITIPLSGALSDRIGRRPVLIIFTVLAALLAVPLLMALLDSGSFTLFFFLVLGL 322 (394)
T ss_pred HHHHHHhcCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHH
Confidence 4444 6788999999999999999999999999999999999998775554444332 22222 25677777888899
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHH-HHHHHhhhhhhchhhhhHhhhhcC-ChhHHHHHHHHHH
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGI-ALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALAL 161 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~-~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~ 161 (414)
|++.+...+...+++.|.+|+ ++|++++++ .+....+|..++|.+++.+.++.| |+..++......+
T Consensus 323 g~~~~~~~~~~~~~~~~~~p~-~~~~~~~~~~~~~~~~~g~~~~p~~~g~l~~~~g~~~~~~~~~~~~~l 391 (394)
T TIGR00883 323 ALIGGMYTGPMGSFLPELFPT-EVRYTGASLAYNLAGAIFGGFAPYIAAALVAMTGDWYAIGYYLAALAL 391 (394)
T ss_pred HHHHHHHhhhHHHHHHHhCCc-cceeeEeeehhHhHHHHHhhHHHHHHHHHHHHcCcchhHHHHHHHHHH
Confidence 999988999999999999994 899999998 456677899999999999999988 8887777665544
No 210
>KOG3098|consensus
Probab=99.28 E-value=4.7e-09 Score=97.81 Aligned_cols=300 Identities=15% Similarity=0.142 Sum_probs=184.6
Q ss_pred HHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCc
Q psy14075 36 FGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD 115 (414)
Q Consensus 36 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~ 115 (414)
.++-+....++.++.+.+.|+.|+|+.++++...+....+.+-+ .|-+.+++.-.+.|+|.+..+...-.++++..+ +
T Consensus 56 ~aiiY~~ftv~~l~~psiv~~i~~K~~lv~ga~~y~~f~~gfl~-~N~y~~yfssallG~Gaallw~GqG~ylt~~st-~ 133 (461)
T KOG3098|consen 56 QAIIYAFFTVSCLFAPSIVNFLGPKWALVIGATCYAAFPLGFLF-PNSYYLYFSSALLGFGAALLWTGQGGYLTSNST-R 133 (461)
T ss_pred HHHHHHHHHHHHHhhHHHHHHhhHHHHHHHHhHHHHHHHHHHHh-cchHHHHHHHHHhhhhHHheecccceehhhcCC-h
Confidence 67777888899999999999999999999999999988887755 456677788899999999999999999999998 5
Q ss_pred chhhHHHHHHHHHHhhhhhhchhhhhHhhhhc--------CCh-h----------HHHHHHHHHHHHHHH--HHHhccCC
Q psy14075 116 RERGNAMGIALGGLALGVLIGPPFGGIMYQFV--------GKT-A----------PFLILSALALGDGLL--QLLLLQPG 174 (414)
Q Consensus 116 ~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~--------gw~-~----------~f~~~~~~~~~~~~~--~~~~~~~~ 174 (414)
+++.+..++.......+.++|..+-..+..+- +-+ . ...+.+++..+..+. ...+.|.+
T Consensus 134 ~tie~Nisi~Wai~~~~li~Ggi~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~v~~~~~~l~~i~~~~~p~~ 213 (461)
T KOG3098|consen 134 ETIERNISIFWAIGQSSLIIGGIILFIYFQFSSSSAIITDGTRRLVFEVLFIDFEIKVLFGVLLAISVLSIINFDFLPSK 213 (461)
T ss_pred hhHHHHHHHHHHHHHHHHHhhhHhheeeeEecccccccccchhhhhcchhhhhHHHHHHHHHHHHHHHHHhhheeecCcc
Confidence 99999999999999998888866543332211 111 0 111111111111111 11111211
Q ss_pred CCC-CCCCC-ch-------hhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHH--hCCC-ccchhhHhHHHHHHHH
Q psy14075 175 VVK-QEVEP-PT-------LKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDT--MGAD-KWQQGVSFLPASISYL 242 (414)
Q Consensus 175 ~~~-~~~~~-~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~-~~~~g~~~~~~~~~~~ 242 (414)
... .+++. .. .-+++++|+...+....+..+.....+....|..+.-. .+.+ ....+......+++.+
T Consensus 214 ~~~~~~~~~~~~~~~~l~~~~~l~~~~~ml~L~~~f~~tG~~~Sf~~~iypt~i~ft~~~~~n~~~~~ai~~~~~g~g~v 293 (461)
T KOG3098|consen 214 DVVNCKSSSETSFSELLKLTFKLLKTPKMLLLFPFFFYTGLETSFWISIYPTCISFTRKLGSNTTYLIAIYSIGIGLGEV 293 (461)
T ss_pred chhhhhhhccccHHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccCcchhHHHHHHHHHhHHHH
Confidence 111 01111 12 22456778877776666666555555555666554332 2222 1223445555667777
Q ss_pred hhhhhhhhhhhh---hhhHHHHHHHHHHHHHHHHHhhhh------------------hhhHHHHHHHHHHHHHHHhhhhh
Q psy14075 243 IGTNLFGPLGHR---MGRYLAALLGLLIIGICLMMIPLA------------------RNINHLIVPNAGLGFAIGMVDSS 301 (414)
Q Consensus 243 ~~~~~~g~l~d~---~~~~~~~~~~~~~~~i~~~~~~~~------------------~~~~~~~~~~~~~g~~~~~~~~~ 301 (414)
++....+.+.+| +|+++.+.++..+-.++.++.... ++.....+..++.|++-......
T Consensus 294 ~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D~~~~t~ 373 (461)
T KOG3098|consen 294 IGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGDACFNTQ 373 (461)
T ss_pred HHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHHHHHHHH
Confidence 777777777765 567777777776666655544321 12334455566667776666544
Q ss_pred hhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHH
Q psy14075 302 MMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSG 341 (414)
Q Consensus 302 ~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g 341 (414)
.....+ ... ++.|..+.++...-..++..++-....
T Consensus 374 ~~~ii~---~~~-~~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 374 RYVIIA---LLY-PDDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHH---HHh-cCchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 443332 233 455577777776666666655444433
No 211
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=99.27 E-value=5.9e-11 Score=109.21 Aligned_cols=181 Identities=18% Similarity=0.248 Sum_probs=118.7
Q ss_pred ccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHH
Q psy14075 189 VMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLII 268 (414)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 268 (414)
.||+.++......++..+.+....++.|.+++++.|+++.+.|.+++...+..++.+++.|.++||++.||-++......
T Consensus 4 ~~~~~~~~~s~~~f~~Ff~~gi~~pF~~iWL~~~~GLs~~~iG~i~s~~~~~~l~~qp~~G~i~Dklg~kK~Ll~~i~~l 83 (412)
T PF01306_consen 4 FKNKNYWWLSLFYFFYFFIWGIFLPFFPIWLTQVAGLSGTEIGIIFSAGSLFALLAQPVYGFISDKLGLKKHLLWFIAIL 83 (412)
T ss_dssp CHSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHTHHHHHHHHHHCTTCSHHHHHHHHH
T ss_pred ccCchHHHHHHHHHHHHHHHHHHHHHHHHHHccccCCCHHHHHHHHHHHHHHHHHHHHhHHHhcchhhhhHHHHHHHHHH
Confidence 57889999999999999999999999999999888999999999999999999999999999999999655443332222
Q ss_pred --HHH-HHHhhhhhhh-HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075 269 --GIC-LMMIPLARNI-NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV 344 (414)
Q Consensus 269 --~i~-~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 344 (414)
..+ ++...+.+-. ....+..++.++..+.......+..-...|...+ +.+.-+|-....+++|.+++..+.|.+.
T Consensus 84 ~~l~~pff~~v~~pll~~n~~lg~iig~i~l~~~f~~~~~~~Ea~~er~sr-~~~feYG~~R~wGSig~ai~s~~~G~L~ 162 (412)
T PF01306_consen 84 LLLFGPFFIYVFGPLLQSNFWLGAIIGGIYLGLVFNAGVPLSEAYAERVSR-RNGFEYGRARMWGSIGFAIASLLAGILF 162 (412)
T ss_dssp HHTCHHHHHHTHHHHHHTT-HHHHHHTTTTTTTTTTTHHHHHHHHHHHHHH-HHSS-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccchHHHHHHHHHHH-HhcCCcchHHHHhhHHHHHHHHHhheee
Confidence 112 2222222110 1122333333444444444444444333444333 2366677778888999999999999999
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 345 NTIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
+ .+.+..|++.....++..++.+..+
T Consensus 163 ~-i~p~~~fwi~s~~~~il~lll~~~~ 188 (412)
T PF01306_consen 163 N-INPNIIFWIASAAAIILLLLLLLLK 188 (412)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHSS-
T ss_pred e-eCccHHHHHHHHHHHHHHHHHHHcC
Confidence 7 4566777776655555444444443
No 212
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=99.27 E-value=1.6e-10 Score=110.15 Aligned_cols=151 Identities=17% Similarity=0.166 Sum_probs=133.9
Q ss_pred hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCc--hhHHHHHHHHHHHHHHHHh--------hhhHHHHHHHHH
Q psy14075 22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYS--LPMFTGFVIMFLSTLIFAF--------GRTYGVLFLARS 91 (414)
Q Consensus 22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr--~~l~~~~~~~~~~~~~~~~--------~~~~~~l~~~r~ 91 (414)
.+++|++..+...+.-...+...++++++|++.||+|.| +++..+++++.+..+...+ .++.+.+.+.-+
T Consensus 309 ~~~lg~s~~~l~~~~l~~~i~a~~Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~g~~~~~~f~~~a~ 388 (477)
T PF11700_consen 309 TEVLGMSTTQLIVFGLVVQIVAIIGALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFFGLKSPWEFWVLAV 388 (477)
T ss_pred HHhcCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhcccCcccHHHHHHHHH
Confidence 458999999999999999999999999999999999999 8988888888666655555 678889999999
Q ss_pred HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC-ChhHHHHHHHHHHHHHHHHHHh
Q psy14075 92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGLLQLLL 170 (414)
Q Consensus 92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~ 170 (414)
+.|+..|..++.+.++.++..|+ ++.+..+|++....-....+||.+.+.+.+..| -|+.+....++.++..++.++.
T Consensus 389 ~~G~~~G~~qs~sRs~~~~LiP~-g~e~efFgly~i~gk~ss~lGPll~g~i~~~tg~~r~g~~~l~~lf~~gl~ll~~v 467 (477)
T PF11700_consen 389 LIGLFMGGIQSASRSLFSRLIPP-GREAEFFGLYAITGKASSWLGPLLFGLITDATGSQRYGFLFLLVLFLIGLILLFFV 467 (477)
T ss_pred HHHHHhhhHHHHHHHHHHHhCCC-chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHhhc
Confidence 99999999999999999999995 899999999999999999999999999998876 8999988888887777766555
Q ss_pred ccC
Q psy14075 171 LQP 173 (414)
Q Consensus 171 ~~~ 173 (414)
..|
T Consensus 468 ~~~ 470 (477)
T PF11700_consen 468 DVE 470 (477)
T ss_pred cch
Confidence 443
No 213
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=99.27 E-value=3.2e-10 Score=107.52 Aligned_cols=177 Identities=19% Similarity=0.203 Sum_probs=127.0
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh----hhhhHHHHHH-HHHH
Q psy14075 193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH----RMGRYLAALL-GLLI 267 (414)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d----~~~~~~~~~~-~~~~ 267 (414)
++..+....+...+++.....+++.|+++ +|.++...+.......+..++..++.|+++| |+|||+..+. +...
T Consensus 5 ~li~~~~~~~Giq~~~~l~~~~l~~yl~~-lg~~~~~~~~i~~~~~l~~~i~~Pi~G~lSDr~~sr~GRRrp~il~g~~~ 83 (477)
T TIGR01301 5 KLLRVASVAAGVQFGWALQLSLLTPYVQE-LGIPHAWASIIWLCGPLSGLLVQPLVGYLSDRCTSRFGRRRPFIAAGAAL 83 (477)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-cCCCHHHHHHHHHHHHHHHHHHHhHeeehhcCCCCCCCChHHHHHHHHHH
Confidence 34455555566677788888888888765 8999999999999999999999999999999 5999988776 4666
Q ss_pred HHHHHHHhhhhhhhH-----------------HHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccch--hhHHhHHHHH
Q psy14075 268 IGICLMMIPLARNIN-----------------HLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVY--GSVYAIGDVA 328 (414)
Q Consensus 268 ~~i~~~~~~~~~~~~-----------------~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~g~~~~~ 328 (414)
..++++++++.++.. ...+...+..++.....+ +.-+.+.|..|+++| +.++++.+..
T Consensus 84 ~~~~l~ll~~~~~~~~~~~~~~~~~~~~~~i~~~~i~~~lld~~~n~~~~---p~rALiaDl~p~~~~~~~~a~~~~~~~ 160 (477)
T TIGR01301 84 VAFAVILIGFAADIGHLFGDNLDKKTKPRAIIVFVVGFWILDVANNMLQG---PCRAFLADLTGGDARRTRIANAYFSFF 160 (477)
T ss_pred HHHHHHHHHhCchhhhhccccccccchhHHHHHHHHHHHHHHHHHHHHHH---HHHHhcccccCchhHHHHHHHHHHHHH
Confidence 666767776654421 112222233345554544 334457788877654 6799999999
Q ss_pred HHHHHhHHHHHHHHH--Hhhh-------------chHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 329 FCLGFAIGPAMSGTL--VNTI-------------GFEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 329 ~~~g~~ig~~~~g~l--~~~~-------------g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
.++|+.+|+.+.+.. .+.+ +++..|++.+++.+++..+..+..++
T Consensus 161 ~~lG~ilg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~F~i~a~~l~i~~l~t~~~v~E 220 (477)
T TIGR01301 161 MAIGNVLGYAAGAYSGLYKIFPFTKTEACGVSCANLKSCFLIDIILLAILTYIALSAVKE 220 (477)
T ss_pred HHHHHHHHHHHHHHHhHHHhcccccccccccccchHHHHHHHHHHHHHHHHHHHeeeeec
Confidence 999999999998865 2221 56788988888877777766655443
No 214
>TIGR00901 2A0125 AmpG-related permease.
Probab=99.25 E-value=1.7e-10 Score=107.32 Aligned_cols=155 Identities=17% Similarity=0.231 Sum_probs=110.7
Q ss_pred hhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh-----hhHHH-HHHHHHHHHHHHHHhhhhh---hh
Q psy14075 211 LEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM-----GRYLA-ALLGLLIIGICLMMIPLAR---NI 281 (414)
Q Consensus 211 ~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~-----~~~~~-~~~~~~~~~i~~~~~~~~~---~~ 281 (414)
.....|.+.++ .|.|..+.++.... .+...+ .++.|+++||+ ||||. +..+.++.++....+.+.+ +.
T Consensus 7 ~~~~~~~~~~~-~g~s~~~~g~~~~~-~~~~~~-~~~~g~~~Dr~~~~~~Grr~~~l~~~~~~~~~~~~~l~~~~~~~~l 83 (356)
T TIGR00901 7 VGNTLPYWLRS-KNVSLKTIGFFSLV-GLPYSL-KFLWSPLVDTVYLPFFGRRRSWLVLTQVLLLSLLLILSFLVPSTDL 83 (356)
T ss_pred HHhHHHHHHHH-cCCCHHHHHHHHHH-HHHHHH-HHHHHHHHhcccCCCCCccHHHHHHHHHHHHHHHHHHHcCCcchhH
Confidence 44557777776 69999999988654 444444 88999999998 78776 4566666666655555542 33
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc--------hHHHH
Q psy14075 282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG--------FEWML 353 (414)
Q Consensus 282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--------~~~~~ 353 (414)
+.+....++.+++.+...+.. .+.+.|..|+++|+.+.++......+|..+++.+.+.+.+..| |+..|
T Consensus 84 ~~l~~~~~~~~~~~~~~~~~~---~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~l~~~~g~~~~~~~~wr~~f 160 (356)
T TIGR00901 84 PLLAGLAFLIAFFSATQDIAL---DAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALVLASPEFANTGLITLWGYIF 160 (356)
T ss_pred HHHHHHHHHHHHHHHHHHHHH---HHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccccccHHHH
Confidence 333344444454444443333 3446788888999999999999999999999999999998888 99999
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy14075 354 FIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~ 371 (414)
.+.+++.++..+..++..
T Consensus 161 ~i~ai~~l~~~~~~~~~~ 178 (356)
T TIGR00901 161 FWTALLILPGLLVTLFLA 178 (356)
T ss_pred HHHHHHHHHHHHHHHHhc
Confidence 988887776555544433
No 215
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=99.24 E-value=1.1e-07 Score=89.95 Aligned_cols=249 Identities=15% Similarity=0.040 Sum_probs=163.4
Q ss_pred chhhhhhhcC-----CcchHHHHHHHHHHHHHHh-hhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh----h------
Q psy14075 18 RENRHKYLMG-----ETKAVGVMFGSKAFVQLLA-NPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG----R------ 81 (414)
Q Consensus 18 ~~~~~~~~g~-----s~~~~g~~~s~~~~~~~~~-~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~----~------ 81 (414)
+.++++.+.. +...+.++-+...+..++. .++.+++++|++|++++-+....+....+++++. +
T Consensus 26 LR~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~~~F~~~f~lF~~vl~p~~~~~~p~ 105 (472)
T TIGR00769 26 LRDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVISPFLGFFALFAFVIYPLSDLLHPT 105 (472)
T ss_pred HHhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHHHHHHHHHHHHHHHHhcchhhcCCc
Confidence 3455666655 3357899999888877777 9999999999999999988888888777777664 1
Q ss_pred ---------------------hHHHHHHHHHHHhhhhhhhhh-hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhh
Q psy14075 82 ---------------------TYGVLFLARSLQGIGSSCSSV-SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPF 139 (414)
Q Consensus 82 ---------------------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l 139 (414)
+.|...+..+...+-...... .-.++.+|.++. +|-.|..+++..+.++|.++++.+
T Consensus 106 ~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS~lFW~fandi~t~-~qakRfy~l~~~ganlg~i~sg~~ 184 (472)
T TIGR00769 106 ALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLSLLFWGFANQITTI-DEAKRFYALFGLGANVALIFSGRT 184 (472)
T ss_pred HHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCH-HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 134444555566655555554 677899999994 899999999999999999999999
Q ss_pred hhHhhhh-------c-CCh----hHHHHHHHHHHHHHHHHHHhccCC---C-------C-CCCCCC----chhhhhccCh
Q psy14075 140 GGIMYQF-------V-GKT----APFLILSALALGDGLLQLLLLQPG---V-------V-KQEVEP----PTLKSLVMDP 192 (414)
Q Consensus 140 ~~~l~~~-------~-gw~----~~f~~~~~~~~~~~~~~~~~~~~~---~-------~-~~~~~~----~~~~~~~~~~ 192 (414)
..++.+. . .|. ..+.+.++..++...+.+.+.+.. + + ++++++ .+.+.++|+|
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~k~k~k~~~~es~k~i~~S~ 264 (472)
T TIGR00769 185 IKYFSKLRASLGPGVDGWHVSLKNLMVIVICSGLAIILLYWWVNRNVLTDPRSYNPALKEKKVKPKMSTMESLKFLVSSP 264 (472)
T ss_pred HHHHHHhhhccccccChHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCccccchhhccccCCCCCCHHHHHHHHHhCH
Confidence 8887732 1 232 233333433333333333322111 1 0 011111 2456788999
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccc----hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHH
Q psy14075 193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQ----QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLII 268 (414)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 268 (414)
.+..+++...+++...+.+....-..+.+.+- ++.+ .|.+....++..++..++.+++.+|+|-+....+.-+..
T Consensus 265 yL~~ia~~vi~y~~~~nlve~~~k~~v~~~~p-~~~~~~~f~g~~~~~~gi~tl~~~l~~~~l~~~~Gw~~~a~i~Pii~ 343 (472)
T TIGR00769 265 YILDLALLVIAYGISINLVEVTWKSKLKAQYP-SPNEYSAFMGDFSTWTGVVSVTMMLLSGNVIRKYGWLTAALITPLVM 343 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 98888888888877777766655555665443 3333 233444556666666677789999998776555544433
No 216
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=99.24 E-value=1.9e-10 Score=108.44 Aligned_cols=148 Identities=17% Similarity=0.082 Sum_probs=115.4
Q ss_pred hhhhhhhcCCcchHHHHHHHHHH-HHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHh------hhhHHHHHHHHH
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAF------GRTYGVLFLARS 91 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~------~~~~~~l~~~r~ 91 (414)
+.+.+|.|.+++++|++.....+ ...++.++.|++.||+|+||.+..+.++.++..+.... .++.+.+.....
T Consensus 232 ~~~l~~~G~s~~~ig~~~~~~~~~~~~~g~~~~g~l~~r~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 311 (390)
T TIGR02718 232 KLYLVDAGWPLEWIGRLGMAGGAVTVLLGCGGGAWLVRRAGLWRTFILGVGLAGSLALLWFAQAAFWLAPGIAVAWSCSA 311 (390)
T ss_pred hHHHHhcCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHcccCCcHHHHHHHHH
Confidence 55667889999999999888764 66677899999999999999998877665333332221 233444455556
Q ss_pred HHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHH
Q psy14075 92 LQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLL 166 (414)
Q Consensus 92 l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~ 166 (414)
+.+++.+...+...+...+..++++++++.++..+...++|..++|.++|.+.++.|++..|++.+++.++..+.
T Consensus 312 ~~~~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~l~~~~G~~~~f~~~~~~~l~a~~~ 386 (390)
T TIGR02718 312 FGSLITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGYLTDRFGYAGGFLSGTVLAVLAILL 386 (390)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHH
Confidence 667777888777778877777633788999999999999999999999999999999999999888777665443
No 217
>KOG2615|consensus
Probab=99.24 E-value=1e-10 Score=103.73 Aligned_cols=117 Identities=24% Similarity=0.312 Sum_probs=101.2
Q ss_pred CCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhh
Q psy14075 225 ADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMP 304 (414)
Q Consensus 225 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 304 (414)
.+..-.|++-+.+++.+.+.++..|.++||+|||.++.+|.+..++.+++...+.+...++..-++.|+.-|.. ..
T Consensus 65 ~~~~yaGflGSsF~ilQ~~sS~~~G~~SD~yGRkpvll~c~~~va~s~ll~~~S~~F~afv~aR~l~Gi~kgnl----~v 140 (451)
T KOG2615|consen 65 ASVFYAGFLGSSFSILQFISSPLWGCLSDRYGRKPVLLACLIGVALSYLLWALSRNFAAFVLARFLGGIFKGNL----SV 140 (451)
T ss_pred ccchhhhhHhhHHHHHHHHhhhhhhhhhhhhCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCch----HH
Confidence 34556788889999999999999999999999999999999999999998888888855555577888777655 33
Q ss_pred hhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh
Q psy14075 305 ELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN 345 (414)
Q Consensus 305 ~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~ 345 (414)
.-+++.|..+++.|+.+++.+++...+|-++||.++|++..
T Consensus 141 ~rAiisdV~sek~r~l~ms~v~~a~~lGfilGPmIGgyla~ 181 (451)
T KOG2615|consen 141 IRAIISDVVSEKYRPLGMSLVGTAFGLGFILGPMIGGYLAQ 181 (451)
T ss_pred HHHHHHhhcChhhccceeeeeehhhhcchhhcchhhhHHHh
Confidence 44567788889999999999999999999999999999987
No 218
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=99.24 E-value=5.6e-10 Score=107.60 Aligned_cols=184 Identities=17% Similarity=0.275 Sum_probs=133.8
Q ss_pred hhccChHHHHHHHHHHHHHH----HHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHH
Q psy14075 187 SLVMDPYILIAAGAITFANT----GIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAAL 262 (414)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~ 262 (414)
..+++|+++.......+... ........++....+ +|-+ ....++.....++..++.++.|+++|.+|||...+
T Consensus 35 g~~~s~~~i~~~~~~~~~~~~~~~~~~~~a~~l~~I~~d-iG~~-~~~~w~~~~~~l~~av~~~~~G~LSDlfGRr~~~i 112 (599)
T PF06609_consen 35 GYYRSPRFIASFAAFSLAVIAAYFVLVLPASILPYINAD-IGGS-DNWSWFSTAWTLASAVSFPFVGRLSDLFGRRYFFI 112 (599)
T ss_pred CceeCHHHHHHHHHHHHHHHHHHHHHhccHHHHHHHHHh-cCCC-ccchHHHHHHHHHHHHHHHhhHHHHHHhcchHHHH
Confidence 34567776655443333222 222223334544444 6765 46677888888999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHH
Q psy14075 263 LGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGT 342 (414)
Q Consensus 263 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~ 342 (414)
.+.++..++.++...+++...++....+.|++.|..... . ..+.|..|.+.|+...++.....-....++|.+...
T Consensus 113 ~g~~l~vvG~Iv~atA~~~~~~iag~~l~GvgaG~~~~~-~---~~isEl~p~k~R~~~~~~~~~~~i~~~~~~~~ia~~ 188 (599)
T PF06609_consen 113 IGSLLGVVGSIVCATAQNMNTFIAGMVLYGVGAGVQELA-A---LAISELVPNKWRGLGLAIASIPFIITTWISPLIAQL 188 (599)
T ss_pred HHHHHHHhHHHHhhcCCcHHHHHHHHHHHHHhhHHHHHH-H---HHHHHhcccchhhhHhHHHHHHHHhhhcccHHHHHH
Confidence 999999999999999999999999999999987766321 1 125688888888877776665544555567777777
Q ss_pred HHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075 343 LVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTK 376 (414)
Q Consensus 343 l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (414)
+..+.+|||.|++..+...++++..+++.+++++
T Consensus 189 ~~~~~~WRw~~~~~~i~~~i~~vl~~~fY~PP~~ 222 (599)
T PF06609_consen 189 FAAHSGWRWIFYIFIIWSGIALVLIFFFYFPPPR 222 (599)
T ss_pred hccCCCcchHHHHHHHHHHHHHHHHHHHhCCCch
Confidence 6666789999999988888877766666555443
No 219
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=99.23 E-value=5.3e-10 Score=120.07 Aligned_cols=157 Identities=8% Similarity=-0.036 Sum_probs=118.2
Q ss_pred hhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc--chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHH
Q psy14075 187 SLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW--QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLG 264 (414)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 264 (414)
+.++++.++.+.+..++..+........+..++...++.+.. ..++..+.+.++.+++.++.|+++||+|||+++..+
T Consensus 4 ~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~G~l~Dr~grk~~l~~~ 83 (1146)
T PRK08633 4 NLLKIIGFLPLLLTQFLNAFNDLGHKILIQNTLIKAYDGSEQVILTAIVNALFLLPFLLLSSPAGFLADKFSKNRVIRIV 83 (1146)
T ss_pred chhhhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHHHHHhhhHhhhcccccHHHHHHHH
Confidence 467778887777777776665555544454455544555433 357778888899999999999999999999999888
Q ss_pred HHHHHHHHHHhhh---hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHH
Q psy14075 265 LLIIGICLMMIPL---ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSG 341 (414)
Q Consensus 265 ~~~~~i~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g 341 (414)
..+..+..++..+ .++.+.+++..++.|++.+...+.... .+.+..|+++|++++|+.+....+|..+|+.+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~---~i~~~~~~~~r~~~~~~~~~~~~ig~~lg~~l~~ 160 (1146)
T PRK08633 84 KLFEVGLTLLIVLAYYLGWFWLAFAVTFLLGAQSAIYSPAKYG---IIPELVGKENLSRANGLLEAFTIVAILAGTALFS 160 (1146)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHhhchHHHh---hhHHhcCcccchhhhhHHHHHHHHHHHHHHHHHH
Confidence 7665554443332 345677777788888888877655443 4668888899999999999999999999999999
Q ss_pred HHHhh
Q psy14075 342 TLVNT 346 (414)
Q Consensus 342 ~l~~~ 346 (414)
++.+.
T Consensus 161 ~l~~~ 165 (1146)
T PRK08633 161 FLFES 165 (1146)
T ss_pred HHHHh
Confidence 99876
No 220
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=99.21 E-value=7.8e-10 Score=95.37 Aligned_cols=152 Identities=17% Similarity=0.172 Sum_probs=119.1
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh-------hhHHHHHHHH
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-------RTYGVLFLAR 90 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-------~~~~~l~~~r 90 (414)
.|++++.+|.|.+|...+.++..+|..+ .++.|.+.||+|++.++.+|.+...++..+...+ .++|.+.+..
T Consensus 25 S~~Lk~~l~~sq~~l~~l~~~~~~G~~~-G~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~~~~~~~~ 103 (250)
T PF06813_consen 25 SPQLKSRLGYSQSQLNTLSTAGDIGSYF-GILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPVWLMCLFL 103 (250)
T ss_pred hHHHHHHhCCCHHHHHHHHHHHHHHhhc-cHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccchHHHHHHH
Confidence 5889999999999999999999999987 5889999999999999999999999999887653 3678888888
Q ss_pred HHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHH-HHHHHHHHHH
Q psy14075 91 SLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL-ALGDGLLQLL 169 (414)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~-~~~~~~~~~~ 169 (414)
++.|.+.+....+......+.|| ++||++.|+.-...+++..+-..+...+.+.-.-+. +.+.+.. .++..+...+
T Consensus 104 ~l~~~s~~~~~ta~lvt~~~NFP--~~RG~vvgilk~~~GLSaai~t~i~~~~f~~~~~~f-ll~la~~~~~v~l~~~~~ 180 (250)
T PF06813_consen 104 FLGGNSSCWFNTASLVTCVRNFP--RSRGTVVGILKGFFGLSAAIFTQIYSAFFGDDPSSF-LLFLAVLPAVVCLVAMFF 180 (250)
T ss_pred HHHcccHHHhhhHHHHHHHHhCc--cccCceehhhhHHHHhHHHHHHHHHHHHcCCChHHH-HHHHHHHHHHHHHHHhhh
Confidence 89888888777777777778887 589999999999999998888777766655422333 3344443 3333444444
Q ss_pred hccC
Q psy14075 170 LLQP 173 (414)
Q Consensus 170 ~~~~ 173 (414)
.++.
T Consensus 181 vr~~ 184 (250)
T PF06813_consen 181 VRPV 184 (250)
T ss_pred eecc
Confidence 4433
No 221
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=99.21 E-value=9.5e-08 Score=89.29 Aligned_cols=303 Identities=16% Similarity=0.098 Sum_probs=187.5
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh--------h-------hHHHHHHHHHHHhhh
Q psy14075 32 VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG--------R-------TYGVLFLARSLQGIG 96 (414)
Q Consensus 32 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~--------~-------~~~~l~~~r~l~G~~ 96 (414)
.+...-.-.+...+.++..|.+.||..|.++...+.+.--++..+++.. + ..+.+++.-.+.|.-
T Consensus 40 ~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i 119 (432)
T PF06963_consen 40 VSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSVAASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAI 119 (432)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHHHHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHH
Confidence 3444444566778889999999999999999888766654444333221 1 112222222222221
Q ss_pred hhh-hhhhHHHHHhhcC------CCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHH
Q psy14075 97 SSC-SSVSGMGMLAERY------PDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLL 169 (414)
Q Consensus 97 ~~~-~~~~~~~~i~~~~------~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 169 (414)
.-. ......+.-.||. + ++++.+.++.+.-.-.+.-+++|++.|.+.+..+.+....+.++..++..++-++
T Consensus 120 ~~Las~~~~iavERDWVvvi~~~~-~~~La~~NA~mRRIDL~ckllaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~ 198 (432)
T PF06963_consen 120 ERLASIANTIAVERDWVVVIAGGD-PGALARMNATMRRIDLFCKLLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYF 198 (432)
T ss_pred HHHHHhhhhheeccchhhhhcCCC-hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHH
Confidence 111 1122223333443 3 3667888888888899999999999999999899998888888888887776554
Q ss_pred hcc------------CCCCCCC-C---C----------------------CchhhhhccChHHHHHHHHHHHHHHHHHhh
Q psy14075 170 LLQ------------PGVVKQE-V---E----------------------PPTLKSLVMDPYILIAAGAITFANTGIAML 211 (414)
Q Consensus 170 ~~~------------~~~~~~~-~---~----------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 211 (414)
+.. +++++.+ + + ..+|+..+++|.+... +...+.++....+
T Consensus 199 ~l~~VY~~~P~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~Y~~q~vflas-~alalLY~TVLsf 277 (432)
T PF06963_consen 199 LLARVYNSVPALAVKKRSSESESSSDEESSSESSSDPSILKRLWNPLRTIIRGWRTYFRQPVFLAS-FALALLYFTVLSF 277 (432)
T ss_pred HHHHHHHhChHhcCCCCCccccccccccccccccchhhHHHHHHHHHHHHhccHHHHHhCHHHHHH-HHHHHHHHHHhcC
Confidence 431 1100000 0 0 0123344555544433 3333333444556
Q ss_pred hhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh---hhhh-h-HHHHH
Q psy14075 212 EPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP---LARN-I-NHLIV 286 (414)
Q Consensus 212 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~---~~~~-~-~~~~~ 286 (414)
...+..|+..+ |+++...|.+-+...+.++.+.++..++.+|+|..|.-.++.....+++.+.. +.+. . ...-.
T Consensus 278 ~~lmt~yl~~~-G~s~~~igi~R~~gav~Gl~gT~~~p~l~~riGlvr~G~~~l~~q~~~L~~~v~~~~~~~~~~~~~s~ 356 (432)
T PF06963_consen 278 GGLMTAYLKSQ-GYSPSVIGIFRGLGAVFGLLGTWVYPWLMKRIGLVRAGLWSLWWQWVCLALCVVSFWAPGSPFSSISA 356 (432)
T ss_pred cHHHHHHHHHC-CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHHHHHHHHhcCCCCchhhHH
Confidence 77788888886 99999999999999999999999999999999998887777776655443322 1211 1 11122
Q ss_pred HHHHHHHHH--HhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHH
Q psy14075 287 PNAGLGFAI--GMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGP 337 (414)
Q Consensus 287 ~~~~~g~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~ 337 (414)
..++.|+.. -..+..-....+...|..|+++||...|.-+..+++-..+--
T Consensus 357 ~~l~~gi~~SR~GLW~fDL~~~qi~Qe~V~~~~Rg~v~gvq~sl~~lf~ll~~ 409 (432)
T PF06963_consen 357 YLLLGGIALSRIGLWSFDLAVTQIMQENVPESERGAVSGVQNSLQSLFELLSF 409 (432)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHhhcccCCHHHhhHHHHHHHHHHHHHHHHHH
Confidence 222222221 112222233334466888999999999999888887666533
No 222
>KOG2532|consensus
Probab=99.20 E-value=1.2e-10 Score=110.35 Aligned_cols=150 Identities=19% Similarity=0.280 Sum_probs=131.5
Q ss_pred HHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--hHHHHHHHHHHHHHHHhh
Q psy14075 221 DTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARN--INHLIVPNAGLGFAIGMV 298 (414)
Q Consensus 221 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~g~~~~~~ 298 (414)
.++.+++.+-+++++....+.+++.+..+++.||+|.|+++..+.++.+++.++.+++.+ .+.+++.-++.|++.+..
T Consensus 66 ~~~~ws~~~k~~i~ss~~~G~i~~~iP~g~l~~k~G~r~v~~~~~~~sa~~t~l~P~aa~~~~~~~~~~R~lqGl~~g~~ 145 (466)
T KOG2532|consen 66 GEYDWSSTEKGLIFSSFFWGYILGQIPGGYLADKFGARRVFFISGLISALLTLLTPLAASIGFYLLLVLRFLQGLGQGVL 145 (466)
T ss_pred ceecCCHHHHHHHHHHHHHHHHHHHcCcHHHHHHcCchHHHHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHhHHHHhHH
Confidence 357788889999999999999999999999999999999999999999999999888653 345677888999999988
Q ss_pred hhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh-hchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 299 DSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT-IGFEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
+|..... ..+-.|+++|++..++.....++|..++.++.|.+.+. .||+..|++.+++.++..++++.+..+
T Consensus 146 ~pa~~~i---~~~W~P~~Ers~~~ail~~g~q~g~v~~mp~sg~lc~s~~GW~sifY~~g~~g~i~~~~w~~~~~d 218 (466)
T KOG2532|consen 146 FPAIGSI---LAKWAPPNERSTFIAILTAGSQLGTIITMPVSGLLCESSLGWPSIFYVFGIVGLIWFILWFLFYSD 218 (466)
T ss_pred Hhhhhce---eeeECCHHHHHHHHHHHHHHHHHHHHHHHHhHHHHhccCCCCchHHHHHHHHHHHHHHHHHHHhcC
Confidence 7766544 56778899999999999999999999999999999998 999999999999988887777666553
No 223
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=99.18 E-value=4.4e-09 Score=94.58 Aligned_cols=167 Identities=16% Similarity=0.215 Sum_probs=129.6
Q ss_pred HHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh---
Q psy14075 201 ITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL--- 277 (414)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~--- 277 (414)
++...+........+| .+++.++.+..++++.......+..+.++..+++.+|+|+|+-++.++.++++++.++.-
T Consensus 22 Ffl~G~~~~l~diLip-~l~~~f~ls~~~a~liqfaff~gYf~~~lpa~~~~kk~gyk~gi~lgL~l~avg~~lF~pAa~ 100 (422)
T COG0738 22 FFLWGFITCLNDILIP-HLKEVFDLTYFEASLIQFAFFGGYFIMSLPAGLLIKKLGYKAGIVLGLLLYAVGAALFWPAAS 100 (422)
T ss_pred HHHHHHHhhcchhhHH-HHHHHhCccHHHHHHHHHHHHHHHHHHhccHHHHHHHhhhHHHHHHHHHHHHHHHHHHhhhhh
Confidence 3333344444444555 578889999999999999999999999999999999999999999999999999888853
Q ss_pred hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh-----------
Q psy14075 278 ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT----------- 346 (414)
Q Consensus 278 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~----------- 346 (414)
..++..++...++.+.|.+......++.++... +++....-+.+.+.+..+|+.++|.+.+.+..+
T Consensus 101 ~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg---~~~~a~~rlnl~q~fn~lGa~~gp~~g~~lils~~~~~~~~~~~ 177 (422)
T COG0738 101 SKSYGFFLVALFILASGIGLLETAANPYVTLLG---KPESAAFRLNLAQAFNGLGAILGPLLGSSLILSGVALTMSAAQI 177 (422)
T ss_pred hhhHHHHHHHHHHHHhhhHHHHhccchHHHHhC---CchhHHHHHHHHHHhhhhHHHHHHHHHHHHHHhhhhhccCHHHH
Confidence 446667778888999999999888887765444 455557788889999999999999999998873
Q ss_pred --------hchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 347 --------IGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 347 --------~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
-.++..|...+...++..+.....+
T Consensus 178 ~~~~~~~~~~v~~pYl~~~~~lvll~v~~~~~k 210 (422)
T COG0738 178 LAIKGADASSVQFPYLILAGLLVLLAVLILLSK 210 (422)
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHHHHHHHhcc
Confidence 1256667766666665555544444
No 224
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=99.15 E-value=4.4e-10 Score=101.60 Aligned_cols=150 Identities=21% Similarity=0.224 Sum_probs=130.0
Q ss_pred hhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q psy14075 23 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV 102 (414)
Q Consensus 23 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 102 (414)
+++|++..++.++.-...+..+++++++|++.||+|.|+++..+++++.+.++..-+...-..+.++-.+.|...|..+.
T Consensus 281 ~~~gls~~~lll~g~~~~vvA~lg~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~~~~~~~~~~~f~i~gll~g~s~G~~qA 360 (438)
T COG2270 281 ADLGLSSTELLLIGIALSVVAALGAIIAGFLDERFGSKPVLMIGLVILSIAALYLIFLEGELDFWILGLLVGTSLGGAQA 360 (438)
T ss_pred HHcCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCceeehHHHHHHHHHHHHHHHccccHHHHHHHHHHHHhcchHHH
Confidence 48999999999999999999999999999999999999999999999999888887777766777777899999999999
Q ss_pred hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC-ChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075 103 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-KTAPFLILSALALGDGLLQLLLLQP 173 (414)
Q Consensus 103 ~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-w~~~f~~~~~~~~~~~~~~~~~~~~ 173 (414)
.+.++.++..|+ ++-++.+|+++...-.+..+||.+.+.+.+..| -|..+....++..+..++.++.+.+
T Consensus 361 ~SRSy~~~lvp~-~k~~~fFglyaltgra~S~~gp~lv~v~t~iTg~~r~g~~~i~vll~iGl~~L~~v~~~ 431 (438)
T COG2270 361 SSRSYLARLVPK-GKEGRFFGLYALTGRAASFLGPFLVAVITQITGSSRAGVLSIIVLLLIGLLLLLRVKVP 431 (438)
T ss_pred HHHHHHHHhCCC-ccccceeehhhhhhhHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHhhHhhEEeecCC
Confidence 999999999995 999999999999999999999999999887654 6776666666655555554444433
No 225
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=99.12 E-value=7.8e-10 Score=105.93 Aligned_cols=123 Identities=18% Similarity=0.239 Sum_probs=105.6
Q ss_pred CcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhhhhhhhHHH
Q psy14075 28 ETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-RTYGVLFLARSLQGIGSSCSSVSGMG 106 (414)
Q Consensus 28 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~~~~~~~~~ 106 (414)
++.+.+++.+...++..++.+++++++||+|+|+++..+.++.+++.++..+. ++.+.+.+..++.|++.+...+...+
T Consensus 255 ~~~~~~~~~~~~~i~~ii~~~~~~~l~~r~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 334 (437)
T TIGR00792 255 DPELFSYMGSIAIVAGLIGVLLFPRLVKKFGRKILFAGGILLMVLGYLIFFFAGSNLPLILVLIILAGFGQNFVTGLVWA 334 (437)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45567888888899999999999999999999999999999888888777665 46677777888899999999998899
Q ss_pred HHhhcCCC------cchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCCh
Q psy14075 107 MLAERYPD------DRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKT 150 (414)
Q Consensus 107 ~i~~~~~~------~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~ 150 (414)
+++|..+. ++++|..+|+.+....+|..+++.+.+.+.+..||.
T Consensus 335 ~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ll~~~G~~ 384 (437)
T TIGR00792 335 LVADTVDYGEWKTGVRAEGLVYSVRTFVRKLGQALAGFLVGLILGIIGYV 384 (437)
T ss_pred HHhhhhhhhhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 99887641 256799999999999999999999999999887773
No 226
>KOG0637|consensus
Probab=99.10 E-value=7.5e-10 Score=100.67 Aligned_cols=327 Identities=17% Similarity=0.157 Sum_probs=191.7
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc----cCCchhHH-HHHHHHHHHHHHHHhhhhHH--------
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR----VGYSLPMF-TGFVIMFLSTLIFAFGRTYG-------- 84 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr----~Grr~~l~-~~~~~~~~~~~~~~~~~~~~-------- 84 (414)
.|++.+++|.+....+.+--+..+...+.||+.|..+|| |||||.++ .+.+..+++.++..++.++.
T Consensus 55 ~tPyl~~lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~~i~~~l~Lig~aaDig~~lgd~~~ 134 (498)
T KOG0637|consen 55 LTPYLQSLGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSLLIAVSLFLIGYAADIGLLLGDNER 134 (498)
T ss_pred ccHHHHHcCCCcccccccccccccccceecccccccccccccccccccchHHHhhHHHHHHHhhhhhHhhhhHHhcCCcc
Confidence 377788899999888888888889999999999999996 89887755 56677778888888876643
Q ss_pred ---------HHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhH-HHHHHHHHHhhhhhhchhhhhHhhhhcCChh--H
Q psy14075 85 ---------VLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGN-AMGIALGGLALGVLIGPPFGGIMYQFVGKTA--P 152 (414)
Q Consensus 85 ---------~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~-~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~--~ 152 (414)
.+++.--+.-+..-....+..+++.|...+ +++.+ +++.+..+..+|..+|..++++ .+|+- +
T Consensus 135 ~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~-d~~~~~Ans~f~~f~avGnvLGY~~g~y----~~~~~~~~ 209 (498)
T KOG0637|consen 135 KPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARG-DAKKTRANSVFSFFMAVGNVLGYALGSY----LGLYKIFP 209 (498)
T ss_pred cccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccC-hhhhhccchhHHHHHHhcceeeeecccc----cCceEEee
Confidence 233333444455556777788999999985 56666 9999999999999999998874 34432 2
Q ss_pred HHHHHHHHHHHHHHHHHh-------c----------cCCCCCCCC-----CC---chh----hhhc-cChHHHHHHHHHH
Q psy14075 153 FLILSALALGDGLLQLLL-------L----------QPGVVKQEV-----EP---PTL----KSLV-MDPYILIAAGAIT 202 (414)
Q Consensus 153 f~~~~~~~~~~~~~~~~~-------~----------~~~~~~~~~-----~~---~~~----~~~~-~~~~~~~~~~~~~ 202 (414)
|......-+.+..+-..+ . ++++...+. +. ... ..+. ..|..+.+++...
T Consensus 210 Ft~~~~~~~~C~~~~~~~~~~v~L~~i~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~e~fG~~~~mpr~m~~L~i~~l 289 (498)
T KOG0637|consen 210 FTLTTACDLYCANLKLCFFLEVTLLLIETSESLWYPQEKPLSPKGTTARSKSSKLPFLLEIFGALKVMPRPMRMLLIVTL 289 (498)
T ss_pred hHHHHHHHHHHHHHHHHHHHhhhhhheecccccccccccCCCCCcccccccccCcchHHHHhchHhhCChhHHHHHHHHH
Confidence 333222222222211111 0 111111110 00 001 1111 2356778888888
Q ss_pred HHHHHHHhhhhchHHHHH-HHhCCCccc----------------hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHH
Q psy14075 203 FANTGIAMLEPSLPIWMM-DTMGADKWQ----------------QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGL 265 (414)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~-~~~g~~~~~----------------~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~ 265 (414)
+.+.+...+..+...++- +.++-++.. -.+=+.++.+...+-+....+++||+|.|+.++.+.
T Consensus 290 ltW~a~f~f~LF~TDfmG~~vy~GDp~a~~~S~a~~~Y~~GV~~G~~GL~ins~~lgi~S~~~~~l~~~~g~r~~y~~~~ 369 (498)
T KOG0637|consen 290 LTWIAWFPFLLFDTDFMGREVYGGDPKADENSEAKKLYNAGVRMGCLGLMLNSIVLGIYSLLVEKLSRKFGTRKRYWGGV 369 (498)
T ss_pred HHHHHHHHHHHHHHHhcchHhhCCCCCCCcchhHHHHHHhccccchHHHHHHHHHHHHHHHHHHHHHHhcCcceEEeehh
Confidence 888887777766666653 334433321 123344556666667788889999999555444444
Q ss_pred HHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhh-hh--------------------hhcccccchhhHHhH
Q psy14075 266 LIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELG-YL--------------------VDIRHTAVYGSVYAI 324 (414)
Q Consensus 266 ~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~--------------------~~~~~~~~~g~~~g~ 324 (414)
....++..+....++.+....-.-..|+-.+.....-....+ +. .+.... -+|...|+
T Consensus 370 ~~f~~~~~~~gl~~~~~~~~~~~~~~G~~~~~~~~~p~~l~~~y~~~g~~~a~t~~~pf~~~s~~~~~sg~-g~G~~~gv 448 (498)
T KOG0637|consen 370 NAFGLATGLAGLVLNTYVVLSHRSTAGILSSPLLTVPYGALALYAILGIPLAITFSIPFALASIEIGNSGL-GQGLDLGV 448 (498)
T ss_pred HHHHHHHHHHhhhhhHHHHHHHHhhcceeecchhcccHHHHHHHHHhCCccccccccccccccccccCccC-CCCceeee
Confidence 434444434443333322222222222111111110000000 00 111111 22666777
Q ss_pred HHHHHHHHHhHHHHHHHHHHhhhchH
Q psy14075 325 GDVAFCLGFAIGPAMSGTLVNTIGFE 350 (414)
Q Consensus 325 ~~~~~~~g~~ig~~~~g~l~~~~g~~ 350 (414)
.|....+...+.....|.+.+..|-.
T Consensus 449 ln~~I~ipQvivs~~~Gp~~~~~G~~ 474 (498)
T KOG0637|consen 449 LNCAIVIPQVLVSLGLGPLDQLFGGG 474 (498)
T ss_pred eeeeeeehhheeeccccchhhhcCCc
Confidence 77777888888888888888888733
No 227
>KOG4332|consensus
Probab=99.09 E-value=8.4e-09 Score=87.24 Aligned_cols=332 Identities=17% Similarity=0.122 Sum_probs=182.8
Q ss_pred hhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q psy14075 23 KYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV 102 (414)
Q Consensus 23 ~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 102 (414)
+.+|....|+|.+.-+..-..++...+.|.++||-||||.-+.-.+.+.+++ +.-.+++|..++++|++-|+..+..+.
T Consensus 65 stYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsC-iTKhSpqYkVLmVGR~LGGiaTsLLFS 143 (454)
T KOG4332|consen 65 STYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSC-ITKHSPQYKVLMVGRVLGGIATSLLFS 143 (454)
T ss_pred hhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHH-HhhcCCceEEEeehhhhhhHHHHHHHH
Confidence 5678888899999888888899999999999999999997555444443332 233578899999999999999999888
Q ss_pred hHHHHH-hhcCCCcchhhHHHHHHH--------HHHhhhhhhchhhhhHhhhhc--CChhHHHHHHHHHHHHHHHHHHhc
Q psy14075 103 SGMGML-AERYPDDRERGNAMGIAL--------GGLALGVLIGPPFGGIMYQFV--GKTAPFLILSALALGDGLLQLLLL 171 (414)
Q Consensus 103 ~~~~~i-~~~~~~~~~r~~~~~~~~--------~~~~~g~~ig~~l~~~l~~~~--gw~~~f~~~~~~~~~~~~~~~~~~ 171 (414)
+--++. .|.. ++|+.-.-+.. .++.+-.+++.+.+..+.+.+ |.-.+|-..+.+..+...+.+.-.
T Consensus 144 aFEsWliaEHn---ekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaigmAvil~~W 220 (454)
T KOG4332|consen 144 AFESWLIAEHN---EKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIGMAVILSSW 220 (454)
T ss_pred HHHHHHHHHhh---hccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHHhhh
Confidence 877754 4443 34443333322 233444555556666666664 455566554443333332222222
Q ss_pred cCCCCCCCCCCch--------hhhhccChHHHHHHHHHHH-HHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHH
Q psy14075 172 QPGVVKQEVEPPT--------LKSLVMDPYILIAAGAITF-ANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYL 242 (414)
Q Consensus 172 ~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~ 242 (414)
.|.-.+ +.++++ .+.+..|+++.++.....+ -...+.....|.|..-.+..+ .--|.+++.+.++.+
T Consensus 221 ~ENygd-ps~~kdlltqf~gaa~aiaSD~ki~LLG~iqsLFE~smytFVFLWTPaLspn~e~---iPhGfiFatFMlASm 296 (454)
T KOG4332|consen 221 SENYGD-PSENKDLLTQFKGAARAIASDEKIALLGAIQSLFEGSMYTFVFLWTPALSPNDEE---IPHGFIFATFMLASM 296 (454)
T ss_pred hhccCC-hhhhHHHHHHhhHhHHHHhcchHHHHHHHHHHHHhhhhheeeeeecccCCCCccc---CCchhHHHHHHHHHH
Confidence 222111 111122 2334556665554433333 333333444566653211112 224788888888999
Q ss_pred hhhhhhhhhhhhhhh--HHHHHHHHHHHHHHHHHhhhh----h---hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy14075 243 IGTNLFGPLGHRMGR--YLAALLGLLIIGICLMMIPLA----R---NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR 313 (414)
Q Consensus 243 ~~~~~~g~l~d~~~~--~~~~~~~~~~~~i~~~~~~~~----~---~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 313 (414)
+|+-+..++..|-.. ...+.+.+....+.+.+.... + +...-.+..+++-.+.|..+|...-+ -.+..
T Consensus 297 LGSSla~Rl~s~s~~~ve~ymqivf~vs~a~l~Lpilt~~vsP~kes~~~s~i~F~~~E~cvGlfwPSimkm---RsqyI 373 (454)
T KOG4332|consen 297 LGSSLASRLLSRSSPKVESYMQIVFLVSIAALLLPILTSSVSPSKESPSESLIGFCLFEACVGLFWPSIMKM---RSQYI 373 (454)
T ss_pred HhhHHHHHHHhcCCcccchHHHHHHHHHHHHHHHHHHHhccCCCcCCchHHHHHHHHHHHHHhhcchHHHHH---HHhhC
Confidence 998888777765433 344455555444443332221 1 12223445555556667665544322 33556
Q ss_pred cccchhhHHhHHHHHHHHHHhHHHHHHHHHHh--hhchHHHHHHHHHHHHHHHHHH
Q psy14075 314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN--TIGFEWMLFIIAILDFMYAPLL 367 (414)
Q Consensus 314 ~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~--~~g~~~~~~~~~~~~~~~~~~~ 367 (414)
|.+.|++.+-.+..--++-.-++-+. .-.| ..+-+..|-++......+.+..
T Consensus 374 PEearstimNfFRvPLnifvClvLyn--lh~~~~p~~tr~mf~icS~~~~~a~i~~ 427 (454)
T KOG4332|consen 374 PEEARSTIMNFFRVPLNIFVCLVLYN--LHVDAFPTTTRNMFGICSAFLFVASILQ 427 (454)
T ss_pred CHHHHhhhhhheechhhHhhhhhhee--cccccCccccchhhhhhHHHHHHHHHHH
Confidence 67666666554432222211111110 0011 1234577777766666554443
No 228
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=99.07 E-value=3e-09 Score=96.54 Aligned_cols=131 Identities=11% Similarity=0.015 Sum_probs=109.8
Q ss_pred hcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhH
Q psy14075 25 LMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSG 104 (414)
Q Consensus 25 ~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~ 104 (414)
+|.++++.++..+.+..+..++.+..+++.||+|+||.+.++..+..++.++....++...+ ..-++.|++.+..+|..
T Consensus 173 ~g~s~~~a~~~~s~~~~~~~iGr~~~~~l~~r~g~~~~l~~~~~l~~~~~~l~~~~~~~~~~-~~~~l~g~~~s~i~P~~ 251 (310)
T TIGR01272 173 LGLPEDQAAHFTAYTWGGAMVGRFIGSAVMPMISQGRYLAFNAFLAVLLSIGAALTHGYVAM-WFVLALGLFNSIMFPTI 251 (310)
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHHcCCHHHH-HHHHHHHHHHHHHHHHH
Confidence 68999999999999999999999999999999999999999888888887766665554433 35568899999999999
Q ss_pred HHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHH
Q psy14075 105 MGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL 159 (414)
Q Consensus 105 ~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~ 159 (414)
.+...+..| ++.+++.++. ....+|..+.|++.|.+.|..|.+.+|++..+.
T Consensus 252 ~s~a~~~~~--~~~~~asai~-~~~~~Gg~i~P~l~G~lad~~g~~~a~~v~~~~ 303 (310)
T TIGR01272 252 FSLALNALG--RHTSQGSGIL-CLAIVGGAIVPLLQGSLADCLGIQLAFALPVPC 303 (310)
T ss_pred HHHHHhhhh--hhhhhhHHHH-HHHHhcchHHHHHHHHHHHhccchHHHHHHHHH
Confidence 999989886 4566777775 566799999999999999999999988755444
No 229
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=99.06 E-value=3.8e-07 Score=82.39 Aligned_cols=146 Identities=27% Similarity=0.393 Sum_probs=121.6
Q ss_pred cchhhhhhhcCCc--chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhh--HHHHHHHHHH
Q psy14075 17 ARENRHKYLMGET--KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRT--YGVLFLARSL 92 (414)
Q Consensus 17 ~~~~~~~~~g~s~--~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~--~~~l~~~r~l 92 (414)
..+.+..+++.+. .+.++..+.+.++..+++++.|.+.||+|||+.+..+.....++.++.++..+ .+.+.+.|+.
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 103 (338)
T COG0477 24 ALPLLLSTLSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGLALLLILRLL 103 (338)
T ss_pred HHHHHHHHcCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchHHHHHHHHHH
Confidence 3455666666666 58899999999999999999999999999999988888776677777777776 9999999999
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCc-chhhHHHHHHHH-HHhhhhhhchhhhhHhhhh--cCChhHHHHHHHHHHHH
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDD-RERGNAMGIALG-GLALGVLIGPPFGGIMYQF--VGKTAPFLILSALALGD 163 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~-~~r~~~~~~~~~-~~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~~~~~~~ 163 (414)
+|++.+...+...+++.|++| + ++|+...+.... ...+|..+++.+++.+... .+||..|..........
T Consensus 104 ~g~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (338)
T COG0477 104 QGLGGGGLLPVASALLSEWFP-EATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAALLGLLL 177 (338)
T ss_pred HHhhhHHHHHHHHHHHHHhcC-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHH
Confidence 999999999999999999997 4 479999999988 6888999999887777654 57999777776665443
No 230
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=99.03 E-value=9e-09 Score=96.36 Aligned_cols=155 Identities=19% Similarity=0.297 Sum_probs=124.5
Q ss_pred hhhhhhhc-CCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh-hhHHHHHH----HHHH
Q psy14075 19 ENRHKYLM-GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG-RTYGVLFL----ARSL 92 (414)
Q Consensus 19 ~~~~~~~g-~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~-~~~~~l~~----~r~l 92 (414)
+.+-+|.| .+....+.+.+...++-...-...+++..|+|.|+++.++.+.+++=..+.+.. ++.+...+ ...+
T Consensus 231 ~~yl~~~gg~~~~~~g~~~~l~~~aEi~~f~~~~~~~~r~g~~~ll~~a~~~~~vR~~l~a~~~~~~~~~~~~~~l~q~l 310 (400)
T PF03825_consen 231 SIYLQELGGYSGSTIGILWALGVVAEIPFFFFSGRFLKRFGIKWLLLLALVAYAVRWLLYAYFSDPWPFIVALQLLGQLL 310 (400)
T ss_pred HHHHHHcccchhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHHHhh
Confidence 34456777 667778888888888899999999999999999999999999999998888887 55444333 3456
Q ss_pred HhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHH-HhhhhhhchhhhhHhhhhcCCh------hHHHHHHHHHHHHHH
Q psy14075 93 QGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGG-LALGVLIGPPFGGIMYQFVGKT------APFLILSALALGDGL 165 (414)
Q Consensus 93 ~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~l~~~l~~~~gw~------~~f~~~~~~~~~~~~ 165 (414)
+|+..+..+.+...++.+..|+ +.|+++.++++.. .++|..+|..++|++.+++|-+ ..+.+.+.+.++..+
T Consensus 311 hG~tf~~~~~a~~~yi~~~~p~-~~~at~Q~l~~~~~~Glg~~iG~~igG~l~~~~g~~~~~~~~~~~~v~a~~~~~~~~ 389 (400)
T PF03825_consen 311 HGLTFGLFHAASVRYIDRIAPP-ELRATAQGLYSALSFGLGGAIGSLIGGWLYDAFGARGMFDWSAVFLVFAVMALVILV 389 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhCCc-cchHHHHHHHHHHHhhHHHHHHHHHHHHHHHHhcchhhhhHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999995 9999999998764 6899999999999999987644 455556665555555
Q ss_pred HHHHhccCC
Q psy14075 166 LQLLLLQPG 174 (414)
Q Consensus 166 ~~~~~~~~~ 174 (414)
+.+++.+|+
T Consensus 390 ~f~~~fk~~ 398 (400)
T PF03825_consen 390 LFVILFKPK 398 (400)
T ss_pred HHHhhccCC
Confidence 555554443
No 231
>KOG2504|consensus
Probab=99.02 E-value=5.2e-09 Score=100.58 Aligned_cols=174 Identities=18% Similarity=0.131 Sum_probs=134.2
Q ss_pred HHHHHHHHHHHHHHHHhh----hhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAML----EPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIG 269 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~ 269 (414)
-|.+++..++......++ ..+.+. +++.++.+..+++++.++......+..++.+.+.||+|.|.+.+.|.++..
T Consensus 44 gWvV~~a~fl~~~~~~g~~~~~Gv~~~~-~~~~f~~s~~~~~~i~sl~~~~~~~~gpl~s~l~~rfg~R~v~i~G~~v~~ 122 (509)
T KOG2504|consen 44 GWVVVFASFLVNLSTDGLINSFGLLFEE-LMDYFGSSSSQIAWIGSLLLGVYLLAGPLVSALCNRFGCRTVMIAGGLVAA 122 (509)
T ss_pred eeeeeHhHHHHHHhhhcchheehhhHHH-HHHHhCCCccHHHHHHHHHHHHHHHhccHHHHHHhhcCchHHHHHHHHHHH
Confidence 344555554444333332 223333 455688888889999999999999999999999999999999999999999
Q ss_pred HHHHHhhhhhhhHHHHH-HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc
Q psy14075 270 ICLMMIPLARNINHLIV-PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG 348 (414)
Q Consensus 270 i~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g 348 (414)
+++++..++++.+.+++ ..++.|+|.++.+.... ..+. ..-+++|+.++|+......+|..+-|.+.-++.+.+|
T Consensus 123 ~g~~lssF~~~i~~l~lt~gvi~G~G~~~~~~pai---viv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~~~l~~~~G 198 (509)
T KOG2504|consen 123 LGLLLSSFATSLWQLYLTFGVIGGLGLGLIYLPAV---VILG-TYFEKKRALATGIAVSGTGVGTVVFPPLLKYLLSKYG 198 (509)
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhhccchhhhcchh---hhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHHHHHHHHhC
Confidence 99999999998876644 56677777777644333 3233 3445678999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 349 FEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
|++.+...+.+.+-.++.....++
T Consensus 199 ~r~~~l~~~~~~l~~~~~~~~~rp 222 (509)
T KOG2504|consen 199 WRGALLIFGGISLNVLVAGALLRP 222 (509)
T ss_pred cHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999988888776666666665
No 232
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.99 E-value=3.3e-07 Score=90.72 Aligned_cols=150 Identities=13% Similarity=0.130 Sum_probs=123.7
Q ss_pred hhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhh--------HHHHHHHH
Q psy14075 20 NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRT--------YGVLFLAR 90 (414)
Q Consensus 20 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~--------~~~l~~~r 90 (414)
.+.+.+|.+.++...+...+....-+..+++|.++|+ +||++.+.++.++..++..+.++... ....+++-
T Consensus 13 Yl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~~~~~~~l~gL 92 (654)
T TIGR00926 13 YFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHPLHDLLDLLGL 92 (654)
T ss_pred HHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccchHHHHHHHHH
Confidence 3456789999999899998888888999999999997 89999999999999999988876421 23355667
Q ss_pred HHHhhhhhhhhhhHHHHHhhcCCCc--chhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-------CChhHHHHHHHHHH
Q psy14075 91 SLQGIGSSCSSVSGMGMLAERYPDD--RERGNAMGIALGGLALGVLIGPPFGGIMYQFV-------GKTAPFLILSALAL 161 (414)
Q Consensus 91 ~l~G~~~~~~~~~~~~~i~~~~~~~--~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-------gw~~~f~~~~~~~~ 161 (414)
.+..+|.|..-|...+...|.++++ ++|-+.+.++..+.++|+.+++++..++.+.. +|...|.+.++..+
T Consensus 93 aLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~aF~i~~i~m~ 172 (654)
T TIGR00926 93 ALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPLAFGVPAILMI 172 (654)
T ss_pred HHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHHHHHHHHHHHH
Confidence 7888999999999999999999742 24778889999999999999999999887543 69999999998888
Q ss_pred HHHHHHHH
Q psy14075 162 GDGLLQLL 169 (414)
Q Consensus 162 ~~~~~~~~ 169 (414)
+..+....
T Consensus 173 ia~lvf~~ 180 (654)
T TIGR00926 173 LALIVFMA 180 (654)
T ss_pred HHHHHHHH
Confidence 77666544
No 233
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=98.99 E-value=3.2e-08 Score=95.25 Aligned_cols=175 Identities=13% Similarity=0.071 Sum_probs=117.0
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh-----hHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG-----RYLAALLGLLII 268 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~-----~~~~~~~~~~~~ 268 (414)
.......++..... ......++.++++.+|.+..+.+.+.+...+...+-. +.|.++||++ ||+.+.++.++.
T Consensus 28 ~~~~~~~y~~qGl~-~l~~~~~~~~l~~~lg~s~~~i~~~~sl~~lpw~~K~-l~g~l~D~~~i~G~rRr~~l~~~~~l~ 105 (468)
T TIGR00788 28 LAIGLQVLFVKGIA-GLMRLPLSPMLTDDLGLDGARYQRLVGLSSLGWALKP-FAGVMSDTFPLFGYTKRWYLVLSGLLG 105 (468)
T ss_pred HHHHHHHHHHhhHH-HHhhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHH-HHHHHHHhcCCCCccchHHHHHHHHHH
Confidence 33444456666666 6666777888888899999999888888888888754 4999999996 666666666655
Q ss_pred -HHHHHHhhhhhhhHHHH-HHHHHHHHHHHhhhhhhhhhhhhhhhccc--ccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075 269 -GICLMMIPLARNINHLI-VPNAGLGFAIGMVDSSMMPELGYLVDIRH--TAVYGSVYAIGDVAFCLGFAIGPAMSGTLV 344 (414)
Q Consensus 269 -~i~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~~--~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 344 (414)
.+++..+...++..... ...++.+++.+......-.. ..|..+ ++.++...+.......+|..+++.+.|.+.
T Consensus 106 ~~~~~~~l~~~~~~~~~~~~~~~l~~~~~a~~dv~~da~---~~e~~~~~~~~~~~~~s~~~~~~~~G~~vg~~l~G~l~ 182 (468)
T TIGR00788 106 SAILYGLLPGKVSSAKVAAAFIFLAALAKALYDVLVDSL---YSERIRESPSAGPSLVSWMWGASATGGLISSLLGGPLL 182 (468)
T ss_pred HHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHhHHHH---HhhhhhcCCCcCCCeeeHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444333322222 34556666666654444443 344433 222233444444555689999999999999
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 345 NTIGFEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
+.++|+..|++.+.+.++......+++++
T Consensus 183 ~~~~~~~~f~~~a~l~ll~~~~~~~~~E~ 211 (468)
T TIGR00788 183 DKTLTRILFLITAALLLLQLFVSNLSKER 211 (468)
T ss_pred HhcCcchHHHHHHHHHHHHHHHHHhcccc
Confidence 99999999999888877775555555443
No 234
>KOG0254|consensus
Probab=98.98 E-value=2.8e-08 Score=97.06 Aligned_cols=141 Identities=23% Similarity=0.339 Sum_probs=118.8
Q ss_pred hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy14075 230 QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYL 309 (414)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~ 309 (414)
.+++.+...++..++.++.|+++|++|||+.++++.+...++.++..++++...+.+.-++.|++.|......+ .+.
T Consensus 91 ~s~~~s~~~lga~~g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~~a~~~~~l~~GR~l~G~g~G~~~~~~p---iy~ 167 (513)
T KOG0254|consen 91 QGLLTSILNLGALVGSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIALAPSWYQLIVGRILTGLGVGGASVLAP---VYI 167 (513)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhccchhhhhhcch---hhH
Confidence 37999999999999999999999999999999999999999999999999999999999999999998864333 357
Q ss_pred hhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh--chHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075 310 VDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI--GFEWMLFIIAILDFMYAPLLYLLRNPP 374 (414)
Q Consensus 310 ~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (414)
.|..|++.||...+..+....+|..++ ++.+...++. +|+..+.+..+.+++..+..++.++.+
T Consensus 168 sEiap~~~RG~l~~~~~l~~~~Gi~~~-~~~~~~~~~~~~~Wr~~~~~~~i~~~~~~~~~~~~pesp 233 (513)
T KOG0254|consen 168 SEIAPAHIRGTLVSLYQLFITIGILLG-YCINYGTSKVYAGWRIPLGLALIPAVILALGMLFLPESP 233 (513)
T ss_pred hhcCChhhhHHHHHHHHHHHHHHHHHH-HHHhhhhccCCccHHHHHHHHHHHHHHHHHHHHhCCCCh
Confidence 788899999999999999888888887 6666666543 899888887777777776655555433
No 235
>KOG0255|consensus
Probab=98.98 E-value=4.8e-09 Score=102.79 Aligned_cols=146 Identities=21% Similarity=0.289 Sum_probs=124.2
Q ss_pred HHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhh
Q psy14075 221 DTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDS 300 (414)
Q Consensus 221 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 300 (414)
+....+.....+..+++.++..+|.++.|.++||+|||+++..+..+..++.+...++++.+...+.-++.|++.+....
T Consensus 111 ~~~c~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~~GRk~~~~~~~~~~~i~~~~~a~a~~~~~~~~~Rfl~G~~~~~~~~ 190 (521)
T KOG0255|consen 111 NLVCDSSTLVALGQSLFFLGVLVGSLIFGPLSDRFGRKPVLLVSLLLFIIFGILTAFAPNYWMFLIFRFLSGFFGSGPLT 190 (521)
T ss_pred ceeeCcHhHHHHHHHHHHHHHHHHHhhheehHhhcccHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHhhccchhH
Confidence 33556677788888999999999999999999999999999999999999999999999999999999999999887754
Q ss_pred hhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 301 SMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
... ....|..+++.|+.+..+ ......++.+++...+++.. +|++.+++..+...+.++..++.++
T Consensus 191 ~~~---~~~~E~~~~~~R~~~~~~-~~~~~~~~~~~~~~~a~~~~--~Wr~~~~~~~~~~~~~~~~~~l~~E 256 (521)
T KOG0255|consen 191 VGF---GLVAEIVSPKQRGLALTL-GGFFFVGGLMLPAGAAYITR--DWRWLFWIISIPSGLFLLLWFLPPE 256 (521)
T ss_pred HhH---hhheeecCcchhhHHHHH-HHHHHHHHHHHHHHHHHHHh--hHHHHHHHHHHHHHHHHHHHHccCc
Confidence 444 346799999999999999 77888899999999999887 8999999888887777666444434
No 236
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=98.97 E-value=1.3e-06 Score=80.38 Aligned_cols=304 Identities=15% Similarity=0.099 Sum_probs=179.7
Q ss_pred CcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHH
Q psy14075 28 ETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGM 107 (414)
Q Consensus 28 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~ 107 (414)
+.--.+.+.-+..+...+..+.+.+..+|...+.=.....++..++.++.+++++.+.=+++-++.+++.|..-....++
T Consensus 57 ~~~~t~~Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~l 136 (402)
T PF02487_consen 57 KSVSTGAVLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSL 136 (402)
T ss_pred CcccchHHHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHH
Confidence 33345667777778888888889999999887666667777888899999999999998999999999999888877776
Q ss_pred HhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCC--hhHHHHHHHHHHHHHHHHHHhccCCCCCCC----C-
Q psy14075 108 LAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK--TAPFLILSALALGDGLLQLLLLQPGVVKQE----V- 180 (414)
Q Consensus 108 i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~----~- 180 (414)
.. .++ + ...+-+..+.+.++++|+..-..+.+ .++ |..+.+...+.++..+..++.+++++.+++ +
T Consensus 137 t~-~y~--~---~~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~L~~~~~~~~~~~~~~ 209 (402)
T PF02487_consen 137 TH-FYG--K---SSLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFLLPSPPTNRPYQESES 209 (402)
T ss_pred HH-hcC--c---cccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHhhccccccCCCcccCC
Confidence 54 554 2 35788888888888888887766666 555 778888877776666555555442211100 0
Q ss_pred -----C-----C-----------chhhhhcc-ChHHHHHHHHHHHHHHHHHhhh-hchHHHH-HHHhCCCccchhhHhHH
Q psy14075 181 -----E-----P-----------PTLKSLVM-DPYILIAAGAITFANTGIAMLE-PSLPIWM-MDTMGADKWQQGVSFLP 236 (414)
Q Consensus 181 -----~-----~-----------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~g~~~~~~g~~~~~ 236 (414)
+ + .++++-++ -|.+....+-.+...+..+.++ ...|... .....-...+..++...
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~k~Ll~ymiPL~lVY~aEY~InqGv~~tl~fp~~~~~~r~~Y~~Y~~~ 289 (402)
T PF02487_consen 210 EDEAEDDLLESETSESKPDSSSKLSFKEKLKRLKPLLWYMIPLFLVYFAEYFINQGVAPTLLFPNSFFSPRDQYRWYQLL 289 (402)
T ss_pred CCcccccccccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhchHHHhcCCccCCCHHHHHHHHHHH
Confidence 0 0 00111111 1111111111122222222221 1222221 11111123345566667
Q ss_pred HHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHH---HhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc
Q psy14075 237 ASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLM---MIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR 313 (414)
Q Consensus 237 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~ 313 (414)
+.++..+++--...+ |+++.+++.+--.+..+.++ .+-+.++.|...+.++.-|+.-|..+... ...+.+..
T Consensus 290 YQ~GVFISRSS~~~~--rir~lwils~LQ~~nl~~~~l~s~~~fipsi~ivf~lif~eGLlGGa~YVNt---F~~I~~~~ 364 (402)
T PF02487_consen 290 YQLGVFISRSSLPFF--RIRRLWILSLLQVINLVFLLLQSWYRFIPSIWIVFVLIFYEGLLGGASYVNT---FYRISEEV 364 (402)
T ss_pred HHHHHhhhhcceeee--ehhhHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhHHHHHH---HHHHHhcC
Confidence 777777776543222 33333322222222211111 12234567776677777787777764433 34456777
Q ss_pred cccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075 314 HTAVYGSVYAIGDVAFCLGFAIGPAMSGTL 343 (414)
Q Consensus 314 ~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l 343 (414)
++++|-.++|.......+|..++..+.=++
T Consensus 365 ~~~~REFslg~vsvsds~GI~lAgll~l~l 394 (402)
T PF02487_consen 365 PPEDREFSLGAVSVSDSLGILLAGLLGLPL 394 (402)
T ss_pred CHHHHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 888999999998887777777766665443
No 237
>KOG2533|consensus
Probab=98.97 E-value=7.6e-09 Score=98.52 Aligned_cols=149 Identities=16% Similarity=0.182 Sum_probs=122.3
Q ss_pred HHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhh
Q psy14075 221 DTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDS 300 (414)
Q Consensus 221 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 300 (414)
+..++...+.+...+.+.++.+++.+.++.+.||++..+.+....++.++..++....++.+.+++..++.|+..+..+|
T Consensus 74 edl~~~~~~l~~~~t~F~v~Yii~~~p~~~L~~r~~ls~~l~~~~~~w~~~~~~~~~~~s~~~~ialr~llGl~es~~wP 153 (495)
T KOG2533|consen 74 EDLKLVGNQLGVLDTVFYVGYIIGQFPSGLLGDRFPLSKGLSVSGILWGLFGFLTAAVHSFPGLIALRFLLGLFESGGWP 153 (495)
T ss_pred cccchhhhhhhhHHHHHHHHHHHHHhhHHHHHHhCChHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHhcccch
Confidence 44667788899999999999999999999999999977777666666665555555578899999999999999999877
Q ss_pred hhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh------hhchHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 301 SMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN------TIGFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~------~~g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
..... +..-+.+++||..+|+.+....+|+++|+.+...+.+ ..||++.|++-+++.+...++.++..+
T Consensus 154 ~~~~~---lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g~~~~~~~~~~~gW~~~FiI~G~i~~~~gi~~f~~lp 228 (495)
T KOG2533|consen 154 GVVAI---LGNWYGKSERGLRMGIWYASASLGNIFGGLIAYGVFKLNGSGGLAGWRWLFIIEGVITLVLGIVVFFFLP 228 (495)
T ss_pred HHHHH---HHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHHhhhhcCCCCcCCceeehhHHHHHHHHHHheEEEEec
Confidence 65544 5567778899999999999999999999999988643 468999999999888887766655433
No 238
>KOG3574|consensus
Probab=98.96 E-value=1.9e-07 Score=83.07 Aligned_cols=326 Identities=13% Similarity=0.042 Sum_probs=205.6
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhc-----ccCCchhHHH-HHHHHHHHHHHHHh-----------
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH-----RVGYSLPMFT-GFVIMFLSTLIFAF----------- 79 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~~-~~~~~~~~~~~~~~----------- 79 (414)
.+|.+.+.-|.|.++.+...-+ +..+. --++|.++.| |+||||..++ ...+.+....+.+.
T Consensus 52 ~iP~lL~ak~vSyt~~a~fS~a-y~P~s-LKllWaPiVDs~y~k~~GrrksWvvp~q~llG~~mllLs~~v~~~~g~ng~ 129 (510)
T KOG3574|consen 52 AIPLLLQAKGVSYTSQAIFSFA-YWPFS-LKLLWAPIVDSVYSKRFGRRKSWVVPCQYLLGLFMLLLSYLVDRGLGGNGG 129 (510)
T ss_pred hhHHHhcCCCcchhhhhhhhhh-hhHHH-HHHHHHhhhHHHHHHhhccccceeeehHHHHHHHHHHHhhCCCcccccCCC
Confidence 4577777778888887765433 22332 2678999999 9999987543 44444444443332
Q ss_pred hhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh-------hcCCh--
Q psy14075 80 GRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ-------FVGKT-- 150 (414)
Q Consensus 80 ~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~-------~~gw~-- 150 (414)
.++...+....++.-+.++.-..+.-.+.-...+ +++.|-+......+.+.|..++..+--.+.+ ..+|.
T Consensus 130 ~p~v~~lt~~f~LLnflaAtQDIAVDgwALtmLs-~e~lgyaST~q~Vg~~~GyfL~~~ifLaL~s~dF~N~y~rs~P~~ 208 (510)
T KOG3574|consen 130 LPNVVALTLLFLLLNFLAATQDIAVDGWALTMLS-RENLGYASTCQSVGQTAGYFLGNVVFLALESPDFCNTYLRSIPLD 208 (510)
T ss_pred CcchHHHHHHHHHHHHHHhhhhhhhhHHHHHhcC-HhhcCchhHHHHHHHhhhHHhhcceeeEecChhhhhHHHhcCcCc
Confidence 1233334445566677777778888888888888 4899999888888888888887655433322 11332
Q ss_pred -------hHHHHHHHHHHHHHHHHHHhccCCCCCCCCCC--------chhhhhccChHHHHHHHHHHHHHHHHHhhhhch
Q psy14075 151 -------APFLILSALALGDGLLQLLLLQPGVVKQEVEP--------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSL 215 (414)
Q Consensus 151 -------~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (414)
...++.+.+.++...+..+..+|++++..++. +-++++++-|.+..........-.++.+-....
T Consensus 209 ~g~ItL~gy~~fwg~~~~vat~Lv~~~kke~~~~~~~e~~~~i~~~yk~l~~vLklk~v~~la~i~lt~K~gf~a~da~t 288 (510)
T KOG3574|consen 209 QGFITLAGYLWFWGALFIVATTLVALLKKENDESVDEELELGIHESYKLLRDVLKLKSVRWLAGILLTGKLGFQAADALT 288 (510)
T ss_pred cceEEhhHHHHHHHHHHHHHHHHHHHhcCCCchhhhhhhhcCHHHHHHHHHHHHcCccHHHHHHHHHHHHHHhhhhhhcc
Confidence 34556666666766666666665544321111 134566777777777777777778888888888
Q ss_pred HHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh------hhhHHHHHHHHHHHHHHHHHhhhhhh---------
Q psy14075 216 PIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR------MGRYLAALLGLLIIGICLMMIPLARN--------- 280 (414)
Q Consensus 216 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~------~~~~~~~~~~~~~~~i~~~~~~~~~~--------- 280 (414)
+.-+.| .|.+..+.++......-.+++.....|++... +-|+....+....... ++..+.++
T Consensus 289 ~LkLle-~Gv~ke~Lal~~v~~~plqI~l~~~~gk~ta~~~pl~~~lka~~~R~~~~~~~t--~Lv~~~~~~~~~~G~~~ 365 (510)
T KOG3574|consen 289 SLKLLE-HGVPKEELALIAVPLVPLQIALPLYIGKWTAGPRPLNVFLKAVPYRLGGGLVQT--ALVWWTPTLGHSDGTFP 365 (510)
T ss_pred chHHHH-cCCChhHheeeeeehhhHHHhhhhhheeecCCCCcchHHHHhhhHHHHHHHHHH--HHHhhhcccccCCCcee
Confidence 888888 59998888777655555666666666655432 1122222222222211 12222111
Q ss_pred hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc
Q psy14075 281 INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG 348 (414)
Q Consensus 281 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g 348 (414)
....++......+..++....+.+.+++.++..++..-|+.+.+.|+..++|+---..+..++.|.++
T Consensus 366 ~~~~il~i~~y~~~~~~~ts~fv~~maf~aqisdp~iggTymTlLNTLsnLGg~wp~tv~l~l~D~lt 433 (510)
T KOG3574|consen 366 RGYYILLITSYAFHQVFVTSMFVSGMAFHAQISDPAIGGTYMTLLNTLSNLGGNWPGTVALWLADGLT 433 (510)
T ss_pred echHHHHHHHHHHhhhHHHHHHHHHHHHHhhcCCcccCccHHHHHHHHHHhcCCcHHHHHHHhcccCc
Confidence 11123333334555555556666777777788889988999999999999999988889999988644
No 239
>KOG0569|consensus
Probab=98.94 E-value=6.6e-09 Score=97.77 Aligned_cols=143 Identities=22% Similarity=0.320 Sum_probs=111.2
Q ss_pred hhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhh---hhhhHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy14075 231 GVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPL---ARNINHLIVPNAGLGFAIGMVDSSMMPELG 307 (414)
Q Consensus 231 g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~---~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 307 (414)
+...+++.+++++|+++.++++||+|||..+.++.++..++.+++.+ .++...+.+.-++.|+..+......+ .
T Consensus 63 S~~vs~f~iG~~~Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s~~~~~~e~li~GR~i~Gl~~gl~~~~~p---m 139 (485)
T KOG0569|consen 63 SLIVSIFFIGGMIGSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLSKSAPSFEMLILGRLIVGLACGLSTGLVP---M 139 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhHHHHHHHH---H
Confidence 45677888999999999999999999999998888888777666655 35667778888999988887755443 3
Q ss_pred hhhhcccccchhhHHhHHHHHHHHHHhHHHHHH-HHHHh-hhchHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075 308 YLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMS-GTLVN-TIGFEWMLFIIAILDFMYAPLLYLLRNPPTK 376 (414)
Q Consensus 308 ~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~-g~l~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (414)
+..|..|.+.||....+......+|..++..++ ..+.. ...|.+.+.+..+.+++..+...++++.+|.
T Consensus 140 yl~E~sP~~~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W~~l~~~~~i~~~~~l~~l~~~PESPk~ 210 (485)
T KOG0569|consen 140 YLTEISPKNLRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLWPYLLAFPLIPALLQLALLPFLPESPKY 210 (485)
T ss_pred HHhhcChhhhccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcchHHHHHHHHHHHHHHHHHHhcCCCCcch
Confidence 578999999999999988888888888875443 22332 2338888888888888888888888776654
No 240
>PRK09669 putative symporter YagG; Provisional
Probab=98.92 E-value=2.5e-08 Score=95.65 Aligned_cols=165 Identities=16% Similarity=0.134 Sum_probs=108.7
Q ss_pred HHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh----hhh-HHHHHHHHHHHHHHHHHhh
Q psy14075 202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR----MGR-YLAALLGLLIIGICLMMIP 276 (414)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~----~~~-~~~~~~~~~~~~i~~~~~~ 276 (414)
+..+........+++.|+.+.+|+++.++|.++.+.-+...+..++.|+++|| +|| |+.++.+.+..+++..++.
T Consensus 19 ~~~~~~~~~~~~~l~~~~t~~~gls~~~~g~i~~i~~i~dai~dp~~G~lsD~~~~r~Grrrp~il~~~~~~~i~~~l~f 98 (444)
T PRK09669 19 TACNLVWQTVMLFLAYFYTDVFGLSAAIMGTMFLVVRVLDAVTDPLMGALVDRTRTRHGQFRPYLLWFAIPFGVVCLLTF 98 (444)
T ss_pred hhhhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHcccceeeEeeecCCCCCCCcchhHHHHHHHHHHHHHHHH
Confidence 33444455667788999999999999999999999999999999999999998 555 4556667676666655444
Q ss_pred hhhh------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh---
Q psy14075 277 LARN------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR-HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT--- 346 (414)
Q Consensus 277 ~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~--- 346 (414)
..++ .....+..++.+.++........+. ..|.. ++++|++..+.......+|..+++.+...+...
T Consensus 99 ~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al---~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~~~~pl~~~~~~ 175 (444)
T PRK09669 99 YTPDFGATGKIIYACVTYILLSLVYTAINVPYCAM---PGAITNDPRERHSLQSWRFALSFIGGLIVSVIALPLVDILGK 175 (444)
T ss_pred hCCCCCcchHHHHHHHHHHHHHHHHHhhcchHHHh---HHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4332 1222333344455555544444433 33433 346788888888888888888887766555443
Q ss_pred ----hchHHHHHHHHHHHHHHHHHHHH
Q psy14075 347 ----IGFEWMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 347 ----~g~~~~~~~~~~~~~~~~~~~~~ 369 (414)
.||...+.+.+++..+...+.++
T Consensus 176 ~~~~~g~~~~~~i~~ii~~v~~~~~~~ 202 (444)
T PRK09669 176 GDEQKGYFYAMMVMGLLGVVLFFCCFF 202 (444)
T ss_pred CchhhhHHHHHHHHHHHHHHHHHHHhC
Confidence 34555666666555554444433
No 241
>PRK10429 melibiose:sodium symporter; Provisional
Probab=98.90 E-value=5.1e-08 Score=94.24 Aligned_cols=167 Identities=15% Similarity=0.135 Sum_probs=109.7
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh----hhh-HHHHHHHHHHHHHHHH
Q psy14075 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR----MGR-YLAALLGLLIIGICLM 273 (414)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~----~~~-~~~~~~~~~~~~i~~~ 273 (414)
+..+..+.....+..+++.|+.+.+|+++.++|.++.+.-+...+..++.|.++|| +|| |+.++.+.+..++++.
T Consensus 13 ~g~~~~~~~~~~~~~~l~~yyt~v~Gls~~~vg~i~~i~ri~dai~dp~~G~lsD~t~sr~Grrrp~il~g~i~~~i~~~ 92 (473)
T PRK10429 13 FGAFGKDFAIGIVYMYLMYYYTDVVGLSVGLVGTLFLVARIWDAINDPIMGWIVNNTRSRWGKFKPWILIGTLANSVVLF 92 (473)
T ss_pred cchhHHhHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHhhchheeehhcCCCCCCCcchhHhhhhHHHHHHHH
Confidence 44444566667778889999999999999999999999999999999999999995 577 5666678777777765
Q ss_pred Hhhhhhh------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcc-cccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075 274 MIPLARN------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIR-HTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT 346 (414)
Q Consensus 274 ~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~ 346 (414)
++...++ .....+..+++.+++.+....+.++. .|.. ++++|.+..+......++|+.+.+.+...+.+.
T Consensus 93 llf~~p~~~~~~~~~~~~~~~~l~~~~~t~~~ip~~al~---~~lt~~~~eR~~l~~~~~~~~~ig~~~~~~~~~~~~~~ 169 (473)
T PRK10429 93 LLFSAHLFEGTAQYVFVCVTYILWGMTYTIMDIPFWSLV---PTLTLDKREREQLVPYPRFFASLAGFVTAGFTLPFVNY 169 (473)
T ss_pred HHHcCCCCCccHHHHHHHHHHHHHHHHHHHHcchHHhhh---HHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5544321 11222333445566666655555544 3433 366788888887777777766666655544332
Q ss_pred h-------chHHHHHHHHHHHHHHHHHHH
Q psy14075 347 I-------GFEWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 347 ~-------g~~~~~~~~~~~~~~~~~~~~ 368 (414)
. ||.....+.+++.++...+.+
T Consensus 170 ~g~~~~~~g~~~~~~i~~~~~~~~~~~~~ 198 (473)
T PRK10429 170 VGGGDRGFGFQMFTLVLIAFFIVSTIITL 198 (473)
T ss_pred hCCCchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 2 344444444444444433333
No 242
>PRK09848 glucuronide transporter; Provisional
Probab=98.87 E-value=2.7e-08 Score=95.63 Aligned_cols=126 Identities=16% Similarity=0.161 Sum_probs=102.4
Q ss_pred hhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhh--hHHHHHHHHHHHhhhhhhhh
Q psy14075 24 YLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGR--TYGVLFLARSLQGIGSSCSS 101 (414)
Q Consensus 24 ~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~--~~~~l~~~r~l~G~~~~~~~ 101 (414)
.+|.++...++......++..++.++++++.||+|+|+++.++.++..++.++..+.+ +++.+++..++.|+|.+...
T Consensus 258 ~~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~r~g~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~l~g~G~~~~~ 337 (448)
T PRK09848 258 VLNDTGLFTVLVLVQNLVGTVASAPLVPGMVARIGKKNTFLIGALLGTCGYLLFFWVSVWSLPVALVALAIASIGQGVTM 337 (448)
T ss_pred ecCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHcCchhHHHHHHHHHHHHHHHHHHH
Confidence 4565554444545555677888999999999999999999999999888887777643 67777777888999999999
Q ss_pred hhHHHHHhhcCCCc------chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCC
Q psy14075 102 VSGMGMLAERYPDD------RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 149 (414)
Q Consensus 102 ~~~~~~i~~~~~~~------~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw 149 (414)
+...++.+|..|.+ +++|...+..+....+|..+|+.+.+.+.+..|+
T Consensus 338 ~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g~~l~~~G~ 391 (448)
T PRK09848 338 TVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPAFILGLSGY 391 (448)
T ss_pred HHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 99999999987631 2358999999999999999999999988877665
No 243
>COG2807 CynX Cyanate permease [Inorganic ion transport and metabolism]
Probab=98.86 E-value=9.6e-08 Score=84.86 Aligned_cols=155 Identities=15% Similarity=0.117 Sum_probs=130.4
Q ss_pred chhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhh
Q psy14075 18 RENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIG 96 (414)
Q Consensus 18 ~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~ 96 (414)
+|.+..|.|+|..+.|++.+...+.+...++....+++| -++|+..+...+.+.++...+.+.+.-..+.- -++.|+|
T Consensus 231 LP~ili~~G~sa~~aG~llsl~~l~~~~~~ll~P~la~R~~n~r~~~~~~~~~~l~G~~G~~~~P~~~~~lw-~~llG~G 309 (395)
T COG2807 231 LPAILIDRGLSAAEAGSLLSLMQLAQLPTALLIPLLARRSKNQRPLVVLALLLMLVGLVGLLLAPGQLPILW-ALLLGLG 309 (395)
T ss_pred HHHHHHHcCCCHHHhhhHHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHHHHHHHHhhhhHHHHH-HHHHhCc
Confidence 488999999999999999999999999999999999996 45677788888888888888888765444443 4899999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc-CChhHHHHHHHHHHHHHHHHHHhccC
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV-GKTAPFLILSALALGDGLLQLLLLQP 173 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~-gw~~~f~~~~~~~~~~~~~~~~~~~~ 173 (414)
.|..++.....+.+..++.++-++..++.|....+=..+||.+.|++-|.. +|+.+++......++..+..+..-++
T Consensus 310 ~G~~F~laL~li~~rs~~a~~Aa~LSgmaQg~GYllAa~GP~l~G~lhDa~gsw~~~~~~l~~~~i~m~i~Gl~a~r~ 387 (395)
T COG2807 310 QGGAFPLALTLILLRSSDAAIAAALSGMAQGVGYLLAAFGPWLFGFLHDATGSWSAPLVLLALATLLMLIFGLRAGRN 387 (395)
T ss_pred cchHHHHHHHHHHhhcCChHHHHHHHHHhhhhhHHHHhhhhhhHhHHHHhcCChHHHHHHHHHHHHHHHHHHhhcchh
Confidence 999999999999999876566677778888877777889999999999875 59999999988888877777766544
No 244
>PF05631 DUF791: Protein of unknown function (DUF791); InterPro: IPR008509 This family consists of several eukaryotic proteins of unknown function.
Probab=98.85 E-value=6.4e-07 Score=80.21 Aligned_cols=149 Identities=16% Similarity=0.135 Sum_probs=108.7
Q ss_pred HHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhh
Q psy14075 221 DTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDS 300 (414)
Q Consensus 221 ~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 300 (414)
+.+|++..+++.++........+...+.|.++||+|||+..+...++.+++++.- ..++.+.+++.-++.|++....++
T Consensus 62 ~~yg~~~~qIa~Lf~~Gf~Ss~i~g~~~G~laD~~Grk~~cl~~cily~~scl~k-~~~~~~~L~~GRvlgGiaTSLLfS 140 (354)
T PF05631_consen 62 ESYGFSEHQIAILFVAGFASSAIFGTFVGSLADRYGRKKACLLFCILYSLSCLTK-HSSNYPVLLLGRVLGGIATSLLFS 140 (354)
T ss_pred HHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHH-hccccHHHHHHHHHHHHHHHHHHH
Confidence 3589999999999999999999999999999999999999988888888887643 346778888889999999998888
Q ss_pred hhhhhhhhhhhc----ccccchhhHHhHHH-HHHHHHHhHHHHHHHHHHhhhch--HHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 301 SMMPELGYLVDI----RHTAVYGSVYAIGD-VAFCLGFAIGPAMSGTLVNTIGF--EWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 301 ~~~~~~~~~~~~----~~~~~~g~~~g~~~-~~~~~g~~ig~~~~g~l~~~~g~--~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
.+-+.. +.|. +|++..+..++... ..+.+-.+....++-++.|..|. ..+|.....+.+++.++....++
T Consensus 141 ~FEsW~--V~Eh~~~g~~~~~L~~tF~~~tf~~n~~vAI~aGv~a~~l~~~~~~g~vaPF~~a~~~l~~~~~~I~~~W~ 217 (354)
T PF05631_consen 141 AFESWM--VHEHNKRGFPQEWLSDTFSLATFFGNGVVAIGAGVVANVLADWFGFGPVAPFDAAIVLLAVAAVLILKTWP 217 (354)
T ss_pred HHHHHH--HHHHHHcCCChHHHHHHHHHHHHHHhHHHHHHHhHHHHHHHHHhCCCCcchHHHHHHHHHHHHHHHHhccc
Confidence 777664 3333 34444555565554 23344455555566666666654 67788777777766665544333
No 245
>KOG4686|consensus
Probab=98.84 E-value=5.1e-08 Score=83.35 Aligned_cols=146 Identities=18% Similarity=0.229 Sum_probs=110.3
Q ss_pred hhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHH-HHHHhhhhHHHHHHHHHHHhhhhh
Q psy14075 20 NRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLST-LIFAFGRTYGVLFLARSLQGIGSS 98 (414)
Q Consensus 20 ~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~-~~~~~~~~~~~l~~~r~l~G~~~~ 98 (414)
..++.+|+|+...+.+.+....-.++..|+.|.++||+|++...+.+..+..+.. ....| +++.=+.+..+.|+...
T Consensus 290 fF~~rfGlS~~~a~~i~s~vy~Isav~spvfg~i~Dk~G~n~~wv~~a~~~tl~~H~~l~F--t~lsPy~~m~~lGLsys 367 (459)
T KOG4686|consen 290 FFQKRFGLSAVSAGNILSTVYGISAVLSPVFGAISDKYGFNLWWVASACILTLLGHSGLFF--TFLSPYTSMTFLGLSYS 367 (459)
T ss_pred HHHHhhCCChhhccchhhhhhhhhhhhhhhHHHhHhhhcceehhHHHHHHHHHHHhhhHHh--hhccHHHHHHHHhhhHH
Confidence 4578999999999999999999999999999999999999988777665544432 22222 33333456677788877
Q ss_pred hhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC---ChhHHH-HHHHHHHHHHHHHH
Q psy14075 99 CSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG---KTAPFL-ILSALALGDGLLQL 168 (414)
Q Consensus 99 ~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g---w~~~f~-~~~~~~~~~~~~~~ 168 (414)
..-......++...| +++.|++.|..+...++|..+.|++++.+.++-| |--.|. ..+.+++....+.+
T Consensus 368 llAcslWP~va~~vp-E~qLGTaygf~qsIqNLgla~i~Iiag~i~d~~g~y~~le~ffl~~~~~aL~svgil~ 440 (459)
T KOG4686|consen 368 LLACSLWPCVASLVP-EEQLGTAYGFIQSIQNLGLAFIPIIAGFIADGDGSYDNLEAFFLIIGLMALTSVGILF 440 (459)
T ss_pred HHHHHHhhhhhhhCC-HHHhcchHHHHHHHHhhhhhHHhhhhheeecCCCchhhHHHHHHHHHHHHHHHHHHHh
Confidence 766666677888889 5999999999999999999999999999998644 444444 44444444333333
No 246
>PF13347 MFS_2: MFS/sugar transport protein
Probab=98.83 E-value=2.3e-08 Score=95.41 Aligned_cols=169 Identities=17% Similarity=0.256 Sum_probs=117.1
Q ss_pred HHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh----hhhhHH-HHHHHHHHHHHHHHHhh
Q psy14075 202 TFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH----RMGRYL-AALLGLLIIGICLMMIP 276 (414)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d----~~~~~~-~~~~~~~~~~i~~~~~~ 276 (414)
+...+.......+++.|+.+..|.++...|.+.....+...+..++.|.++| |+|||| .++.+.+..++++.++.
T Consensus 11 ~~~~~~~~~~~~~~~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrrp~~l~g~i~~~~~~~llf 90 (428)
T PF13347_consen 11 LGYNMIWSLLSSYLLYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRRPWILIGAILLALSFFLLF 90 (428)
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccceEeehhhHHHHHHHHHhh
Confidence 3344555556678888999999999999999999999999999999999999 677654 55568888888777776
Q ss_pred hh-h-h------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc-ccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075 277 LA-R-N------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRH-TAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI 347 (414)
Q Consensus 277 ~~-~-~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~ 347 (414)
.. + + .....+..+++.+++........++ ..|..+ +++|.+..+..+....+|..+...+.+.+.+..
T Consensus 91 ~~~p~~~~~~~~~~~~~~~~~l~~~~~t~~~i~~~al---~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~~~~~l~~~~ 167 (428)
T PF13347_consen 91 SPPPAGLSFTAKLVWLFVFYILFDIAYTFVQIPYNAL---IPELTPDPDERTRLSSWRMIFSMIGSLLASFLAPILVSWF 167 (428)
T ss_pred ccccchhhhhhHHHHHHHHHHHHHHhhhhccCchhhc---CccccccHhhhhhHHHHHHHHHHHHHHHHHHHhhhhhhhh
Confidence 54 3 1 1122344444566666665444444 334433 467899999988888888877777777776543
Q ss_pred -------chHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 348 -------GFEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 348 -------g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
+|+....+.+++..+...+..+..|+
T Consensus 168 g~~~~~~~~~~~~~v~~iv~~v~~~i~~~~~ke 200 (428)
T PF13347_consen 168 GGGDTSNGYRWMALVLAIVGLVFFLITFFFVKE 200 (428)
T ss_pred ccCccchHHHHHHHHHHHHHHHHhhhhhheeee
Confidence 46666666666666655555554444
No 247
>PRK11462 putative transporter; Provisional
Probab=98.82 E-value=2e-07 Score=89.70 Aligned_cols=169 Identities=18% Similarity=0.162 Sum_probs=115.9
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh----hhh-HHHHHHHHHHHHHHHH
Q psy14075 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR----MGR-YLAALLGLLIIGICLM 273 (414)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~----~~~-~~~~~~~~~~~~i~~~ 273 (414)
+.-+..+..+.....++..|+.+..|+++..+|.++.+.-+.-.+.-++.|.++|| +|| |+.++++.+..++++.
T Consensus 16 ~g~~~~~~~~~~~~~~l~~fyt~~~Gl~~~~~g~i~~~~ri~Dai~Dp~~G~~~D~t~~r~Gr~rp~il~g~i~~~i~~~ 95 (460)
T PRK11462 16 MGDAASHIIFDNVMLYMMFFYTDIFGIPAGFVGTMFLVARALDAISDPCMGLLADRTRSRWGKFRPWVLFGALPFGIVCV 95 (460)
T ss_pred cchhhhhHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHhhhheehhccCCCCCCCcchhHhHHHHHHHHHHH
Confidence 33444455566677889999999999999999999999999999999999999997 455 4556667777777766
Q ss_pred Hhhhhhh------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075 274 MIPLARN------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI 347 (414)
Q Consensus 274 ~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~ 347 (414)
++...++ .....+..+++.+++.+....+.++....+++ +++|++..+.......+|..+++.+...+.+..
T Consensus 96 llf~~p~~s~~~~~~y~~~~~~~~~~~~t~~~ipy~al~~~lt~d--~~eRt~l~s~r~~~~~iG~~~~~~~~~plv~~~ 173 (460)
T PRK11462 96 LAYSTPDLSMNGKMIYAAITYTLLTLLYTVVNIPYCALGGVITND--PTQRISLQSWRFVLATAGGMLSTVLMMPLVNLI 173 (460)
T ss_pred HHHhCCCCCcchHHHHHHHHHHHHHHHHHHHhccHHHHHHHhcCC--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 6554432 12233344455667766665555554444432 677899999999888888888888776665544
Q ss_pred -------chHHHHHHHHHHHHHHHHHHHH
Q psy14075 348 -------GFEWMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 348 -------g~~~~~~~~~~~~~~~~~~~~~ 369 (414)
||.....+.+++.+++..+++.
T Consensus 174 g~~~~~~g~~~~~~i~~ii~~i~~~i~~~ 202 (460)
T PRK11462 174 GGDNKPLGFQGGIAVLSVVAFMMLAFCFF 202 (460)
T ss_pred CCCchhhhHHHHHHHHHHHHHHHHHHHHh
Confidence 3455555555544444444333
No 248
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=98.81 E-value=2.1e-07 Score=80.46 Aligned_cols=158 Identities=18% Similarity=0.124 Sum_probs=105.7
Q ss_pred HhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-------hh
Q psy14075 209 AMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-------NI 281 (414)
Q Consensus 209 ~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-------~~ 281 (414)
+.+..|-|. +++.+|+|..|...+.....++..+| ++.|.+.||+|++.++.++.+...+++..+...- +.
T Consensus 19 Y~Fs~yS~~-Lk~~l~~sq~~l~~l~~~~~~G~~~G-~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~~~~~ 96 (250)
T PF06813_consen 19 YTFSAYSPQ-LKSRLGYSQSQLNTLSTAGDIGSYFG-ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIPSLPV 96 (250)
T ss_pred cchhhhhHH-HHHHhCCCHHHHHHHHHHHHHHhhcc-HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccCccch
Confidence 344444554 67789999999999988888888775 8889999999999999999999999988877632 23
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHH-
Q psy14075 282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILD- 360 (414)
Q Consensus 282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~- 360 (414)
|.+.+..++.+.+.... ....+....+++|+ .||++.|+.-....+++++-..+...+.+. +...-+.+.+...
T Consensus 97 ~~~~~~~~l~~~s~~~~---~ta~lvt~~~NFP~-~RG~vvgilk~~~GLSaai~t~i~~~~f~~-~~~~fll~la~~~~ 171 (250)
T PF06813_consen 97 WLMCLFLFLGGNSSCWF---NTASLVTCVRNFPR-SRGTVVGILKGFFGLSAAIFTQIYSAFFGD-DPSSFLLFLAVLPA 171 (250)
T ss_pred HHHHHHHHHHcccHHHh---hhHHHHHHHHhCcc-ccCceehhhhHHHHhHHHHHHHHHHHHcCC-ChHHHHHHHHHHHH
Confidence 33333334443433332 12222334577874 689999999999999888888777776654 3233333333333
Q ss_pred HHHHHHHHHhcCC
Q psy14075 361 FMYAPLLYLLRNP 373 (414)
Q Consensus 361 ~~~~~~~~~~~~~ 373 (414)
+++++...+.+..
T Consensus 172 ~v~l~~~~~vr~~ 184 (250)
T PF06813_consen 172 VVCLVAMFFVRPV 184 (250)
T ss_pred HHHHHHhhheecc
Confidence 3333444444444
No 249
>KOG3762|consensus
Probab=98.78 E-value=2.6e-08 Score=92.53 Aligned_cols=147 Identities=20% Similarity=0.177 Sum_probs=132.6
Q ss_pred hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhh
Q psy14075 22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSS 101 (414)
Q Consensus 22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~ 101 (414)
.||.+..+...|........+-.+.-++.+++.+|+|+-+++..++...++=.+..++.+|.|+.+-..+++|+..+..+
T Consensus 398 led~~~~~~LfGv~~a~~~~gEI~~~ffs~klI~kiGHv~v~~lgLa~~~~Rf~~~S~L~n~W~vLPieilqgit~aliW 477 (618)
T KOG3762|consen 398 LEDLGGIKTLFGVVSALCHAGEILFYFFSFKLIEKIGHVNVMYLGLACNVGRFLYYSYLQNPWMVLPIEILQGITHALIW 477 (618)
T ss_pred HhhcCCcceeeeehhhhhccchHHHHHHHHHHHHHhcccceeeehhhHHHHHHHHHHHhcCchheeeHHHHHHHHHHHHH
Confidence 46777777788877888888888899999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHHHhhcCCCcchhhHHHHHHHHH-HhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHH
Q psy14075 102 VSGMGMLAERYPDDRERGNAMGIALGG-LALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLL 169 (414)
Q Consensus 102 ~~~~~~i~~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 169 (414)
.+..+|+++..|| +-|..+.++++.. .++|--+|.++||.+.+.++-|..|...++.+++..+....
T Consensus 478 aa~~sY~s~vaPp-~l~at~Q~l~~g~f~GlG~g~GslIGG~~v~~fg~~ttf~~~giAcl~~l~~~~~ 545 (618)
T KOG3762|consen 478 AAIISYASHVAPP-GLRATAQGLLQGIFHGLGKGLGSLIGGFVVERFGARTTFRIFGIACLVTLALFIS 545 (618)
T ss_pred HHHHHHHHhhCCC-cchHHHHHHHHHHhcccCcchhhhhhhhhheeehhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999997 9999999998664 68999999999999999999999999999988776665443
No 250
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.78 E-value=5.9e-11 Score=114.14 Aligned_cols=142 Identities=21% Similarity=0.290 Sum_probs=113.6
Q ss_pred chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh---hhHHHHHHHHHHHHHHHhhhhhhhhh
Q psy14075 229 QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR---NINHLIVPNAGLGFAIGMVDSSMMPE 305 (414)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~---~~~~~~~~~~~~g~~~~~~~~~~~~~ 305 (414)
+.++..+...++..+|.++.|.++||+|||+.+..+..+..++.++..+++ +.+.+.+.-++.|++.|...+...
T Consensus 47 ~~~~~~~~~~~g~~~G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~R~~~G~~~g~~~~~~~-- 124 (451)
T PF00083_consen 47 LSSLLTSSFFIGAIVGALIFGFLADRYGRKPALIISALLMIIGSILIAFAPSYNNFWMLLIGRFLIGFGIGGAYVVSP-- 124 (451)
T ss_pred HHHHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--
Confidence 456788889999999999999999999999999999999999999999988 888888888999999888755444
Q ss_pred hhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh---hchHHHHHHHHHHHHHHHHHHHHhcCC
Q psy14075 306 LGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT---IGFEWMLFIIAILDFMYAPLLYLLRNP 373 (414)
Q Consensus 306 ~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~---~g~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (414)
.+..|..|++.|+...++.+....+|..++..+.-.+.+. .+|+..+.+..+..++..+...+.++.
T Consensus 125 -~~~~E~~~~~~R~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~~~~Wr~~~~~~~~~~l~~~~~~~~~pES 194 (451)
T PF00083_consen 125 -IYISEIAPPKHRGFLSSLFQLFWALGILLASLIGYIVSYYSDNWGWRILLIFGAIPSLLVLLLRFFLPES 194 (451)
T ss_pred -cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 4577888999999999999888888887777665433332 348888877777776655555555543
No 251
>KOG0253|consensus
Probab=98.71 E-value=3.8e-08 Score=87.25 Aligned_cols=134 Identities=13% Similarity=0.166 Sum_probs=103.4
Q ss_pred HHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhh
Q psy14075 40 AFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERG 119 (414)
Q Consensus 40 ~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~ 119 (414)
++.-.-+.++.+.+.||+|||+.+..+.+++++..++...+.+-....+.-+..-++..+.+.+.+.|..|.+| .+-|+
T Consensus 391 slaefPGlLIt~~iverlGRKkTMal~l~~f~iflfll~~c~~rn~~tvllf~arafisg~fqvaYvYtPEVyP-TavRa 469 (528)
T KOG0253|consen 391 SLAEFPGLLITGVIVERLGRKKTMALSLILFGIFLFLLTTCKTRNAYTVLLFTARAFISGAFQVAYVYTPEVYP-TAVRA 469 (528)
T ss_pred HHhhCCchhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHhcCcchhHHHHHHHHHHHhchheEEEEecCcccc-hhhhh
Confidence 34456678899999999999999999999999999988777654443333333334444555667889999999 59999
Q ss_pred HHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCC
Q psy14075 120 NAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVV 176 (414)
Q Consensus 120 ~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~ 176 (414)
...|.-....-+|.++.|.++ +.....-..+..+.+...++..+...+++-|++.
T Consensus 470 tgvGtcSsmaRIggI~~p~iA--~~~e~s~sl~i~vy~~~~ilagIavcffPiEtkG 524 (528)
T KOG0253|consen 470 TGVGTCSSMARIGGIFSPVIA--MRAELSTSLPIFVYGALFILAGIAVCFFPIETKG 524 (528)
T ss_pred cchhhhhhHHhhhhhhhhHHH--HHhccceeehHHHHHHHHHHHHHHheeeeeccCC
Confidence 999999999999999999998 3322345567778888888888888777665543
No 252
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=98.69 E-value=6e-07 Score=88.91 Aligned_cols=165 Identities=10% Similarity=0.092 Sum_probs=122.6
Q ss_pred HHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHHHHHHHHHHHHHhhhhhh------
Q psy14075 208 IAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALLGLLIIGICLMMIPLARN------ 280 (414)
Q Consensus 208 ~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~i~~~~~~~~~~------ 280 (414)
++++...+..|+.+.+|++...+..++..+....-+..+++|+++|+ +|+++.+.++.++..++..++.+...
T Consensus 3 yYGm~aiLvlYl~~~lg~~~~~A~~i~~~f~~l~yl~pilGg~iAD~~lG~~~tIl~~~ii~~lG~~llai~a~~~~~~~ 82 (654)
T TIGR00926 3 YYGMRTILVLYFLNFLGFSESTSTVLFHTFTYLCYLTPLIGAIIADGWLGKFKTILYLSIVYVVGHALLSFGAIPSSGHP 82 (654)
T ss_pred eeecHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 45566677888888889998888887777777777788899999996 79999999999998888877765321
Q ss_pred --hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh-------chHH
Q psy14075 281 --INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI-------GFEW 351 (414)
Q Consensus 281 --~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~-------g~~~ 351 (414)
....++.+.+..+|.|..-+...+.....-+..+++.+-+.+.+.....++|+.+++.+.+++.+.. +|..
T Consensus 83 ~~~~~~l~gLaLia~G~GgiKp~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~l~~~~~~fg~~~~~~~ 162 (654)
T TIGR00926 83 LHDLLDLLGLALIALGTGGIKPCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPILRGDVGCFGCQDCYPL 162 (654)
T ss_pred hHHHHHHHHHHHHHhhccccccCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccCcchHH
Confidence 1224456666777777776666655443332222334678888899999999999999999988543 5888
Q ss_pred HHHHHHHHHHHHHHHHHHhcC
Q psy14075 352 MLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 352 ~~~~~~~~~~~~~~~~~~~~~ 372 (414)
+|.+.+++.+++.++....++
T Consensus 163 aF~i~~i~m~ia~lvf~~g~k 183 (654)
T TIGR00926 163 AFGVPAILMILALIVFMAGSK 183 (654)
T ss_pred HHHHHHHHHHHHHHHHHHhcc
Confidence 999988888888777665444
No 253
>KOG3810|consensus
Probab=98.62 E-value=1.4e-06 Score=76.79 Aligned_cols=341 Identities=12% Similarity=0.097 Sum_probs=216.5
Q ss_pred hhcCCcchHH-HHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhh
Q psy14075 24 YLMGETKAVG-VMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSV 102 (414)
Q Consensus 24 ~~g~s~~~~g-~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~ 102 (414)
+.+++..|+. -+.-.-.-.+.+.-.+.=.+.|-.--|++++.-.+.......+.-+.++.+.+=+.-+..|...+.. .
T Consensus 35 ~~NlT~~~l~~evyPvwTYSYLv~LvpvFlLTD~lrYKPvivlq~ls~v~~w~~lv~g~sV~~mQvlE~FyG~~tAaE-I 113 (433)
T KOG3810|consen 35 DKNLTEDQLTNEVYPVWTYSYLVGLVPVFLLTDYLRYKPVVVLQALSGVPVWIMLVFGPSVKAMQVLEFFYGPATAAE-I 113 (433)
T ss_pred CCCccHHHHhcccccchhHHHHHHHHHHHHHhhhhhcceeeeeeccchhHHHHHHHhcCCchheeeehhhcChHHHHH-H
Confidence 4455554432 1233334456666777788999999999999888888888888889999999999999999977655 4
Q ss_pred hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCC--hhHHHHHHHHHHHHHHHHHHhccCCCC----
Q psy14075 103 SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK--TAPFLILSALALGDGLLQLLLLQPGVV---- 176 (414)
Q Consensus 103 ~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw--~~~f~~~~~~~~~~~~~~~~~~~~~~~---- 176 (414)
+.++++-...++ +++.++.+......-.|-.+|..++..+.+...+ ...-.+.-....+..+..++.+++++.
T Consensus 114 AYysYIYs~Vd~-~~Yqrvt~y~RaA~L~g~~~g~vlaQlLvs~~~~sy~~LN~ISL~~~~ia~~~A~fLP~v~rSl~f~ 192 (433)
T KOG3810|consen 114 AYYSYIYSKVDP-EMYKRVTGYCRAAFLVGKFVGSVLAQLLVSLETLSYTTLNYISLAEVTIAVLLALFLPRVKRSLYFH 192 (433)
T ss_pred hhhheeeeecCH-HHHHHHHHHhHHHHHHHhHHHhHHHHHHhhhcccchhhhchhhHHHHHHHHHHHhhCCCCchhhhhh
Confidence 567888888885 9999999999999999999999999888865333 333333333333444444444433311
Q ss_pred --CCCC---------CC---------------chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCC-Cccc
Q psy14075 177 --KQEV---------EP---------------PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGA-DKWQ 229 (414)
Q Consensus 177 --~~~~---------~~---------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~~~~ 229 (414)
+++. ++ .++.+..+||++..-.+-..+...++.....+....-++.-.- ...-
T Consensus 193 ~~~~~~~v~~~e~~~~~~~~~~~l~~~~~~l~~~l~~~y~np~ll~WSlWwAl~scg~~QV~nY~Q~LW~~~~~~~~~vy 272 (433)
T KOG3810|consen 193 RLEDKISVGDLEEMNPQASYMSYLRGAFVLLWRDLQECYSNPRLLKWSLWWALASCGYYQVTNYTQILWKEVAPNPANVY 272 (433)
T ss_pred cccccceeccchhcCccchhhHHHHHHHHHHHHHHHHHhcCchhhhhHHHHHHhhchhHHHHHHHHHHHHhhCCCchhhh
Confidence 0000 00 0223455778777666777777777777776666655553111 1112
Q ss_pred hhhHhHHHHHHHHhhhhhhhhhhhhhhhH--HHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy14075 230 QGVSFLPASISYLIGTNLFGPLGHRMGRY--LAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELG 307 (414)
Q Consensus 230 ~g~~~~~~~~~~~~~~~~~g~l~d~~~~~--~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~ 307 (414)
.|..=+...+.++++.+..|.+.-++.|. .++.++.+..+-.++.+...++.|.....-+++...+....+....
T Consensus 273 NG~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~--- 349 (433)
T KOG3810|consen 273 NGAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATF--- 349 (433)
T ss_pred cCHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHH---
Confidence 34445555667777788888876555543 3445566666666677777788888888777777777665433322
Q ss_pred hhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc-----------hHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 308 YLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG-----------FEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 308 ~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g-----------~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
.+++....+..|..+|+.+++.-+-..+-.. .+.|..| |..-|.+.+.+.++...+.....+
T Consensus 350 ~iA~nL~~e~~gLvFGiNTFvAl~lQsilT~---iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~ 422 (433)
T KOG3810|consen 350 QIARNLSSELFGLVFGINTFVALILQSILTL---IVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCR 422 (433)
T ss_pred HHHHhhhhhhheeeeehHHHHHHHHHHhheE---EEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhh
Confidence 3445556677789999877644443333332 2344222 334566777777776655444433
No 254
>KOG2325|consensus
Probab=98.58 E-value=1.6e-06 Score=81.33 Aligned_cols=179 Identities=16% Similarity=0.201 Sum_probs=120.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhchHHHHHH-HhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhh-HHHHHHHHHHHHHH
Q psy14075 194 ILIAAGAITFANTGIAMLEPSLPIWMMD-TMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR-YLAALLGLLIIGIC 271 (414)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~-~~~~~~~~~~~~i~ 271 (414)
.++..+..++....+..+..-.-.|+++ ..+.+....|+..+...++.+++++..|+...|.+. |+.++.+.+++.++
T Consensus 36 i~l~~~~sfl~~v~~sI~~~s~wpYl~~lD~~A~~~ffG~viaa~slg~~i~~liF~~Ws~k~~~~k~Pli~s~ii~~~g 115 (488)
T KOG2325|consen 36 IYLALLNSFLVAVQFSIYLTSMWPYLQKLDPTATATFFGLVIAASSLGHAIFSLIFGIWSNKTGSVKKPLIVSFLIAIIG 115 (488)
T ss_pred HHHHHHHHHHHhhhheEEEeecchhhhhcCCCCCcchhhHHHHHHHHHHHhcchhhcccccccCCcccCHHHHHHHHHHH
Confidence 4444555555555555554444455655 246667778999999999999999999999999885 77788899999888
Q ss_pred HHHhhhh----h-hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075 272 LMMIPLA----R-NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT 346 (414)
Q Consensus 272 ~~~~~~~----~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~ 346 (414)
.+++... + ..+.+.++-++.|++.+.. ...=.++++..-.++|.++.+..+....+|..+||.+...+...
T Consensus 116 ~llY~~l~~~~~~~~y~mL~~R~l~Gvg~~n~----a~lR~Y~a~~s~~~dR~rA~a~~~~~~vlg~ilGp~~q~~f~~L 191 (488)
T KOG2325|consen 116 NLLYLALAYVPNGVKYLMLVARILTGVGVGNF----AVLRAYIADASTVEDRPRAFAATSGGFVLGIILGPTIQLAFTPL 191 (488)
T ss_pred HHHHHHHHhcccchHHHHHHHHHHcCcCcccH----HHHHHHHHhccCccchHHHHHHhhhHHHHHHHHhHHHHHHHhhh
Confidence 8777332 2 3445566667777766544 33334566666667788888888877778888888766444321
Q ss_pred ------------hc-hHHHHHHHHHHHHHHHHHHHHhcCCCch
Q psy14075 347 ------------IG-FEWMLFIIAILDFMYAPLLYLLRNPPTK 376 (414)
Q Consensus 347 ------------~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 376 (414)
++ |..+-+++++..++.+++..+..++..+
T Consensus 192 g~~G~~i~~~~~~n~YTap~w~m~i~~i~~~v~i~~~f~E~~~ 234 (488)
T KOG2325|consen 192 GEKGFMILPGLIFNMYTAPAWLMAILWIIYIVIILFFFKEVYR 234 (488)
T ss_pred cCCceEEcCcceEEecchHHHHHHHHHHHHHHHHHhheeeccc
Confidence 11 4556677777777777766655544433
No 255
>PF01770 Folate_carrier: Reduced folate carrier; InterPro: IPR002666 The reduced folate carrier (a transmembrane glycoprotein) transports reduced folate into mammalian cells via the carrier mediated mechanism (as opposed to the receptor mediated mechanism) it also transports cytotoxic folate analogues used in chemotherapy [], such as methotrexate (MTX). Mammalian cells have an absolute requirement for exogenous folates which are needed for growth, and biosynthesis of macromolecules [].; GO: 0005542 folic acid binding, 0008518 reduced folate carrier activity, 0006810 transport, 0016020 membrane
Probab=98.57 E-value=1.2e-05 Score=74.21 Aligned_cols=164 Identities=15% Similarity=0.093 Sum_probs=121.0
Q ss_pred HhhhhchHHHHHHH-hCCCccchhhH-hHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHH
Q psy14075 209 AMLEPSLPIWMMDT-MGADKWQQGVS-FLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIV 286 (414)
Q Consensus 209 ~~~~~~~~~~~~~~-~g~~~~~~g~~-~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 286 (414)
--...++..|+.+. .|++..+..-- +-...=..++..+....+.|..+.|++++++.+...+...++.+.++...+-+
T Consensus 20 rPsEPfl~~yL~~~~kn~T~~qv~~~i~Pv~tYSyl~~l~~vflltd~l~Ykpviil~~~~~i~t~~lll~~~sv~~mq~ 99 (412)
T PF01770_consen 20 RPSEPFLTPYLTGPDKNFTEEQVNNEIYPVWTYSYLAFLLPVFLLTDYLRYKPVIILQALSYIITWLLLLFGTSVLAMQL 99 (412)
T ss_pred CCCCccchHHHcCCccCCCHHHHHHhhhhHHHHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHCcHHHHHH
Confidence 34667888888876 78887776542 22233345555666778999999999999999998888888888888888888
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh--hchHHHHHHHHHHHHHHH
Q psy14075 287 PNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT--IGFEWMLFIIAILDFMYA 364 (414)
Q Consensus 287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~--~g~~~~~~~~~~~~~~~~ 364 (414)
..++.|+....- ....+++-...|++..-++.+......-+|..++..++-.+... ..+.....+......++.
T Consensus 100 ~q~~yg~~~a~e----vay~sYiys~v~~~~yq~vts~~raa~l~g~~~s~~lgQllvs~~~~sy~~L~~isl~~~~~a~ 175 (412)
T PF01770_consen 100 MQFFYGLATAAE----VAYYSYIYSVVDKEHYQKVTSYTRAATLVGRFISSLLGQLLVSFGGVSYFQLNYISLASVSLAL 175 (412)
T ss_pred HHHHHHHHHHHH----HHHHHHheeecCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHH
Confidence 888887776654 33334555666677777888888888888888888887776653 347777777777777888
Q ss_pred HHHHHhcCCCch
Q psy14075 365 PLLYLLRNPPTK 376 (414)
Q Consensus 365 ~~~~~~~~~~~~ 376 (414)
++.+++++.++.
T Consensus 176 ~~~~fLP~~~~S 187 (412)
T PF01770_consen 176 LIALFLPMPKRS 187 (412)
T ss_pred HHHHHcCCCCcc
Confidence 888888776543
No 256
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=98.56 E-value=3.1e-06 Score=79.24 Aligned_cols=173 Identities=16% Similarity=0.158 Sum_probs=125.2
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhh----hh-HHHHHHHHHHHHH
Q psy14075 196 IAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRM----GR-YLAALLGLLIIGI 270 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~----~~-~~~~~~~~~~~~i 270 (414)
...+.-+..+..+.....|+..|+.++.|.++..+|.++.+.=+.-++.-++.|.++||. || |+.++.+.+..++
T Consensus 16 ~Yg~gd~~~~~~~~~~~~yLl~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~~r~GrfRP~lL~g~ip~~i 95 (467)
T COG2211 16 GYGLGDFASNFAFGIVVLYLLFFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTRSRWGRFRPWLLWGAIPFAI 95 (467)
T ss_pred hhcchhhHHHHHHHHHHHHHHHHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccccccccccHHHHHHhHHHHH
Confidence 344455556677777888999999999999999999999999999999999999999974 44 5566677777777
Q ss_pred HHHHhhhhhh------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075 271 CLMMIPLARN------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV 344 (414)
Q Consensus 271 ~~~~~~~~~~------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 344 (414)
...+....++ .....+.-+++++++......+.++...+.+ ++++|.+..+.-.....+|..+...+.+.+.
T Consensus 96 ~~~l~F~~p~~~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~--d~~ER~~l~s~R~~~~~~g~~l~~~~~~plv 173 (467)
T COG2211 96 VAVLLFITPDFSMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQ--DPQERASLTSWRMVFASLGGLLVAVLFPPLV 173 (467)
T ss_pred HHHHHHcCCCcccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcC--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6666655542 2233455667788888876666666554444 3667899999999999999888888887777
Q ss_pred hhh-------chHHHHHHHHHHHHHHHHHHHHh
Q psy14075 345 NTI-------GFEWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 345 ~~~-------g~~~~~~~~~~~~~~~~~~~~~~ 370 (414)
... ||+....+.+++..+....+++-
T Consensus 174 ~~~g~~~~~~g~~~~~~~~~vi~~i~~l~~~~~ 206 (467)
T COG2211 174 KLFGGGDKALGYQGTALVLGVIGVILLLFCFFN 206 (467)
T ss_pred HHhCCCcchhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 543 45555555555555555554443
No 257
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=98.52 E-value=1.3e-07 Score=66.19 Aligned_cols=72 Identities=13% Similarity=0.017 Sum_probs=66.2
Q ss_pred ccchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHH
Q psy14075 16 VARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLF 87 (414)
Q Consensus 16 ~~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~ 87 (414)
+.+|.+.+|.++|.++.|++.+.+++||.++++...++.++..+++.+..+.+...+..+.+++.++++.+.
T Consensus 13 plLP~M~~~~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w~ 84 (85)
T PF06779_consen 13 PLLPLMQADGGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLWS 84 (85)
T ss_pred hHhHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHHh
Confidence 356677799999999999999999999999999999999999899999999999999999999999887653
No 258
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=98.41 E-value=4.7e-06 Score=79.27 Aligned_cols=157 Identities=18% Similarity=0.206 Sum_probs=114.2
Q ss_pred hHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh-----hHHHHHHHHHHHHHHHHHhhhhh----hhHHHH
Q psy14075 215 LPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMG-----RYLAALLGLLIIGICLMMIPLAR----NINHLI 285 (414)
Q Consensus 215 ~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~----~~~~~~ 285 (414)
...|+++.+|+++.+...+.....+...+ .++.|.++|-+. ||..++++.++..++.+.+...+ +.....
T Consensus 12 ~~~~l~~~l~ls~~~~~~~~~~~~lPw~~-Kp~~g~lsD~~pi~G~rr~~Y~~i~~~~~~~~~~~~~~~~~~~~s~~~~~ 90 (433)
T PF03092_consen 12 IYPFLKDDLGLSPAQLQRLSSLASLPWSI-KPLYGLLSDSFPIFGYRRKPYMIIGWLLGAVSALVLALLPASESSAAIAV 90 (433)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHhCchHH-hhhHHhhcccccccCCcchHHHHHHHHHHHHHHHHHHhcccccchhhhHH
Confidence 44567888999999988877776665554 678899999863 66666777777755555444422 344444
Q ss_pred HHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy14075 286 VPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP 365 (414)
Q Consensus 286 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 365 (414)
+..++..++........-..........|.+ +|...+.......+|+.++..+.|.+.+..+++..|.+.+.+..+..+
T Consensus 91 ~~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~G~l~~~~~~~~~f~i~~~~~~l~~~ 169 (433)
T PF03092_consen 91 VLLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLSGPLLDSFGPQGVFLISAALPLLMLI 169 (433)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhhhhhhhcCCCeEEehHHHHHHHHHHH
Confidence 5556666666666555555555555556655 788899999999999999999999999999999999888888777766
Q ss_pred HHHHhcCC
Q psy14075 366 LLYLLRNP 373 (414)
Q Consensus 366 ~~~~~~~~ 373 (414)
..+...++
T Consensus 170 ~~~~~~~e 177 (433)
T PF03092_consen 170 VALFLLEE 177 (433)
T ss_pred HHHHhhhh
Confidence 66666554
No 259
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=98.39 E-value=0.00024 Score=66.43 Aligned_cols=326 Identities=10% Similarity=-0.014 Sum_probs=177.6
Q ss_pred cchhhhhh--hcCCcchHHHHHHHHHHHHHHhhhHHHHhhc-----ccCCchhHHH-HHHHHHHHHHHHHhhh-------
Q psy14075 17 ARENRHKY--LMGETKAVGVMFGSKAFVQLLANPLVGILTH-----RVGYSLPMFT-GFVIMFLSTLIFAFGR------- 81 (414)
Q Consensus 17 ~~~~~~~~--~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-----r~Grr~~l~~-~~~~~~~~~~~~~~~~------- 81 (414)
..|.+.++ -+.|.+|.|...- ....+.+ -++|.++.| |+||||..++ -..+.++..+..+..-
T Consensus 22 siPflL~~~~~~~sy~q~~~fSl-a~~PfSl-KlLWaPiVDs~y~~~~GRRKSWiiP~Q~l~g~~m~~l~~~i~~~~~~~ 99 (544)
T PF13000_consen 22 SIPFLLQSMAKKVSYSQQAIFSL-ASYPFSL-KLLWAPIVDSVYSKRIGRRKSWIIPIQYLSGILMLYLSYNISQWLLFD 99 (544)
T ss_pred cchhhhccccCCCChhHheeeee-eechhHH-HHhhhhhhhhhcccccCCcchhhhHHHHHHHHHHHHHHhccchhhccc
Confidence 35667677 6888888876532 2222222 445555555 7999998554 3333333333332211
Q ss_pred -----------------hHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh
Q psy14075 82 -----------------TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY 144 (414)
Q Consensus 82 -----------------~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~ 144 (414)
+...+...-++.=+-.+.-..+.-.+.-.... +++++.+......+.+.|..++..+--.+-
T Consensus 100 ~~~d~~~~~~~~~~~~~~i~~Lt~~F~~L~fl~ATQDIAVDGWALT~Ls-~~n~~~ASTcqtvG~~~Gyfls~tvFlaln 178 (544)
T PF13000_consen 100 GVDDALLGQGESTVNNITIKFLTWFFFILVFLCATQDIAVDGWALTMLS-PENVGYASTCQTVGQTAGYFLSFTVFLALN 178 (544)
T ss_pred ccchhhhcCCCCcccccchhHHHHHHHHHHHHHccCCceeehhhhhhcC-hhhcchHHHHHHhHhhhhHHHHHHHHHhhC
Confidence 11122233333334445555555566666667 488888888888887877777665443332
Q ss_pred h-----hc--------C---ChhHHHHHHHHHHHHHHHHHHhccCCCCCC---------------C-------CCC----
Q psy14075 145 Q-----FV--------G---KTAPFLILSALALGDGLLQLLLLQPGVVKQ---------------E-------VEP---- 182 (414)
Q Consensus 145 ~-----~~--------g---w~~~f~~~~~~~~~~~~~~~~~~~~~~~~~---------------~-------~~~---- 182 (414)
+ .+ | -..-..+.+...++..+...++.+|++..+ + +++
T Consensus 179 s~~f~Nky~r~~p~~~glvtl~~yl~fwg~~~l~~T~~v~~~k~E~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (544)
T PF13000_consen 179 SPDFCNKYLRSTPSDEGLVTLSGYLKFWGWVFLIVTILVAFFKKEKPHSESLPKIEPINKSDGKSKEISIEYDESDVIST 258 (544)
T ss_pred CHHHHHHhcccCCCCCCeeeHHHHHHHHHHHHHHHHHHHheEeecccccccCccccccccccccccccceecccccccch
Confidence 1 11 1 112234555555666666666655432100 0 000
Q ss_pred ---c-------hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhh
Q psy14075 183 ---P-------TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG 252 (414)
Q Consensus 183 ---~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 252 (414)
. ...+++|-|.+..+.+.....-.++.+-......-+.| .|++.++.+.+..+..-.+++.....++++
T Consensus 259 ~~~~~i~~~Y~~l~~ilkLp~V~~li~ilL~~KigF~a~da~T~LKLlE-kG~~KE~LAl~~li~~P~qii~~~~~~Kws 337 (544)
T PF13000_consen 259 EEILSIKDVYKSLWKILKLPNVQTLIIILLTAKIGFQANDAVTSLKLLE-KGLSKEDLALLVLIDFPFQIILPYYIGKWS 337 (544)
T ss_pred hhhhhHHHHHHHHHHHHcCchHHHHHHHHHHHHhccccchhhhHHHHHH-cCCCHHHhHHHHHHhhhHHHHHHHHhhhhh
Confidence 0 12245667777777777777778777777777777777 599998887776655555555555555554
Q ss_pred hhhhh---------------------------HHHHHHHHHHHHHH----HHHhhhhh-----hhHHHHHHHHHHHHHHH
Q psy14075 253 HRMGR---------------------------YLAALLGLLIIGIC----LMMIPLAR-----NINHLIVPNAGLGFAIG 296 (414)
Q Consensus 253 d~~~~---------------------------~~~~~~~~~~~~i~----~~~~~~~~-----~~~~~~~~~~~~g~~~~ 296 (414)
.--.+ -+..+.++..-.+. .......+ +.+.+.+..+...+...
T Consensus 338 ~g~~P~~~~~~~l~~~~~~~~~~~~l~g~~g~L~~Wl~af~gRL~~a~l~~~iV~~fP~~g~v~~~Yf~lvI~~~~l~sf 417 (544)
T PF13000_consen 338 AGSPPLDVDNKALPNFSRANKIIRLLVGDAGALRPWLWAFWGRLVAALLAQLIVYFFPSDGPVPTYYFLLVIIQHVLSSF 417 (544)
T ss_pred cCCCccccccccccccccccchhhhhhccchhhHHHHHHHHHHHHHHHHHHheEEeCCCCCCcchHHHHHHHHHHHHHHH
Confidence 31110 01122222211111 11111111 11222222222333333
Q ss_pred hhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh
Q psy14075 297 MVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT 346 (414)
Q Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~ 346 (414)
+....+.+..++-+...+|..=|+.+.+.|+..++|+.--..+.=++.|.
T Consensus 418 ~stvmFVai~AFharISDP~IGGTYMTLLNTvSNLGGtWP~~~vL~lVD~ 467 (544)
T PF13000_consen 418 MSTVMFVAIMAFHARISDPAIGGTYMTLLNTVSNLGGTWPRTFVLWLVDY 467 (544)
T ss_pred HHHHHHHHHHHHHhhccCcccchHHHHHHHHHHhcCCCchHHHHHHHhhh
Confidence 33334555555666777788889999999999999998877777777774
No 260
>KOG0252|consensus
Probab=98.39 E-value=2.6e-06 Score=78.16 Aligned_cols=113 Identities=19% Similarity=0.167 Sum_probs=83.9
Q ss_pred CCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh--h-----hHHHHHHHHHHHHHHHh
Q psy14075 225 ADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR--N-----INHLIVPNAGLGFAIGM 297 (414)
Q Consensus 225 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~-----~~~~~~~~~~~g~~~~~ 297 (414)
+++...+.......++.++|+++.|++.||+|||++....++++.++.++..... + .+.+...-+++|+|.|.
T Consensus 81 ~ps~i~~~Vn~~A~vGti~GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~~~s~~~~~~~~~m~~L~~~R~~LGiGIGG 160 (538)
T KOG0252|consen 81 YPSGVLALVNAAALVGTIFGQLFFGWLGDKFGRKKVYGKELIIMIICSALSGLSVGTTSPLGVMMTLCFFRFLLGIGIGG 160 (538)
T ss_pred CCchHHHHHHHHHHHHHHHHHHHHHHHHhhhcchhhhhHHHHHHHHHHHHhccCCCCCCCcchhhHHHHHHHHhhccccC
Confidence 4556677888889999999999999999999999999999998888877555431 1 23345566788999998
Q ss_pred hhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHH
Q psy14075 298 VDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMS 340 (414)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~ 340 (414)
-+|...+. ..|....+.||.-.+..-..+..|...|..+.
T Consensus 161 DYPlSAtI---~SE~an~~~RGa~iaavFa~Qg~GilaG~ivt 200 (538)
T KOG0252|consen 161 DYPLSATI---MSESANKKTRGAFIAAVFAMQGFGILAGGIVA 200 (538)
T ss_pred CCcchHHH---hhhhhhhccccceeEEEEEecchhHhhccHHH
Confidence 87655444 55766777888887776666666655555444
No 261
>KOG2816|consensus
Probab=98.37 E-value=2e-05 Score=74.84 Aligned_cols=134 Identities=24% Similarity=0.345 Sum_probs=100.6
Q ss_pred HHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccc
Q psy14075 238 SISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAV 317 (414)
Q Consensus 238 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (414)
++..++...+.|.++||+|||..+........+..+.+.+.. +|. .+ +.++.-+ .........++.++....+.
T Consensus 72 ~~~~~i~s~~iG~lSD~~grk~~L~~~~~~~~l~~~~~~~~~-~~~-~~---~~~l~g~-~~~~~s~~~a~vadis~~~~ 145 (463)
T KOG2816|consen 72 GLLTLISSPLIGALSDRYGRKVVLLLPLFGTILPALCLLFQG-YWF-FL---LLGLSGG-FSAIFSVGFAYVADISSEEE 145 (463)
T ss_pred HHHHHHHHhhhHHhhhhhhhhhhHHHHHHHHHHhHHHHHHHH-HHH-hh---hcccccc-hhhhhhhhhhheeeccchhH
Confidence 677788889999999999999999888887777766665544 222 22 2222211 11223444556778888889
Q ss_pred hhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075 318 YGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPPTKE 377 (414)
Q Consensus 318 ~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (414)
|....|+.+.....+..++|.+.+.+.+..|+...|.+..+..++..+......++...+
T Consensus 146 R~~~~gll~~~~~~~~~~~p~~~~~~~~~~~~a~~f~ia~~~~~~~~~y~~~~l~Esl~~ 205 (463)
T KOG2816|consen 146 RSSSIGLLSGTFGAGLVIGPALGGYLVKFLGIALVFLIAAASGILSLLYMLLFLPESLQE 205 (463)
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhccccccCc
Confidence 999999999999999999999999999999999999999888888877766655544433
No 262
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=98.34 E-value=1e-05 Score=64.55 Aligned_cols=107 Identities=15% Similarity=0.119 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCC
Q psy14075 35 MFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD 114 (414)
Q Consensus 35 ~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~ 114 (414)
-.++......+++++.+.+.+++|.|+.++++.+.+.+-.+.. +.++.+.++.+-++.|++.+..+++...++.+..+
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~- 119 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGTYLTSYST- 119 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhHHHHHcCC-
Confidence 3556666678888889999999999999999999998665554 56778899999999999999999999999999988
Q ss_pred cchhhHHHHHHHHHHhhhhhhchhhhhHh
Q psy14075 115 DRERGNAMGIALGGLALGVLIGPPFGGIM 143 (414)
Q Consensus 115 ~~~r~~~~~~~~~~~~~g~~ig~~l~~~l 143 (414)
+++|++-.+++......+.++|.++.-.+
T Consensus 120 ~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 120 EETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred HHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 59999999999999888888887765544
No 263
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=98.32 E-value=0.0018 Score=62.01 Aligned_cols=235 Identities=16% Similarity=0.061 Sum_probs=145.7
Q ss_pred CcchHHHHHHHHHH-HHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh---------h----------------
Q psy14075 28 ETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG---------R---------------- 81 (414)
Q Consensus 28 s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~---------------- 81 (414)
.+..+..+=....+ ...+......+++||++|.+++-+....+.....++++. +
T Consensus 56 gae~I~flK~~~vlP~a~~f~~~y~kl~n~~s~~~lFy~~~~~F~~fF~~f~~vlyP~~~~lhp~~~~~~~~~~~~~~~~ 135 (491)
T PF03219_consen 56 GAEVIPFLKVWGVLPVAILFTILYSKLSNRLSREKLFYIIIIPFLGFFALFAFVLYPNRDILHPDAFADKLLAILPPGFK 135 (491)
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHhhchhhcCCCHHHHHhhhhccchHH
Confidence 34445555444444 345567789999999999999888777777776666652 1
Q ss_pred ------hHHHHHHHHHHHhhhhhhhhh-hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhh---------
Q psy14075 82 ------TYGVLFLARSLQGIGSSCSSV-SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQ--------- 145 (414)
Q Consensus 82 ------~~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~--------- 145 (414)
+.|...+..++.-+-...... .-..+.+|.++ .+|-.|..+++..+.++|.+++..+...+.+
T Consensus 136 ~~i~~~~~Wt~slfYv~aElwgsvvlSlLFW~fAN~itt-~~eAKRfYpl~g~ganigli~sG~~~~~~~~~~~~~~~~~ 214 (491)
T PF03219_consen 136 GFIAMFRNWTFSLFYVMAELWGSVVLSLLFWGFANEITT-VEEAKRFYPLFGLGANIGLIFSGQLTSYFSSFLRKSLPAG 214 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccc
Confidence 123344444444443333333 45678899998 5999999999999999999999998888877
Q ss_pred hcCChhHHH----HHHHHHHHHHHHHHHhc----cCCC-------CCCCCCC----chhhhhccChHHHHHHHHHHHHHH
Q psy14075 146 FVGKTAPFL----ILSALALGDGLLQLLLL----QPGV-------VKQEVEP----PTLKSLVMDPYILIAAGAITFANT 206 (414)
Q Consensus 146 ~~gw~~~f~----~~~~~~~~~~~~~~~~~----~~~~-------~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~ 206 (414)
.-.|...+. +..+.+++...+...+. +++. +++++++ ++.+.++|+|.+..+++...+++.
T Consensus 215 ~~~~~~~l~~l~~~v~~~g~~i~~~~~~~~~~vl~~~~~~~~~~~~kk~k~k~s~~es~k~l~kS~yL~~Ia~lvi~Ygi 294 (491)
T PF03219_consen 215 VDAWELSLNSLMGIVLILGIVIILLYRYMNKNVLTDPRFYPSAKKKKKKKPKMSLKESFKLLLKSKYLLCIALLVIAYGI 294 (491)
T ss_pred cccHhHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccchhhhcccccCCCccHHHHHHHHHhCHHHHHHHHHHHHHHH
Confidence 123553332 12222222222222221 1111 1111111 245667889998888888888888
Q ss_pred HHHhhhhchHHHHHHHhCCCccc----hhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHH
Q psy14075 207 GIAMLEPSLPIWMMDTMGADKWQ----QGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLG 264 (414)
Q Consensus 207 ~~~~~~~~~~~~~~~~~g~~~~~----~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~ 264 (414)
..+.+....-..+++.+. ++.+ .|-.....++..++..++.+.+.+|+|-+....+.
T Consensus 295 ~inLvE~~wK~~lk~~~~-~~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~Alit 355 (491)
T PF03219_consen 295 SINLVEVVWKSQLKQLYP-DPNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALIT 355 (491)
T ss_pred HHHHHHHHHHHHHHHHCC-CchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHh
Confidence 777777766666666543 3333 23445556666666677788888998876655553
No 264
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=98.22 E-value=7.7e-05 Score=68.23 Aligned_cols=148 Identities=18% Similarity=0.117 Sum_probs=123.1
Q ss_pred hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhc-ccCCchhHHHHHHHHHHHHHHHH---hhhhHHHHHHHHHHHhhhh
Q psy14075 22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTH-RVGYSLPMFTGFVIMFLSTLIFA---FGRTYGVLFLARSLQGIGS 97 (414)
Q Consensus 22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~d-r~Grr~~l~~~~~~~~~~~~~~~---~~~~~~~l~~~r~l~G~~~ 97 (414)
.+-||+|..|...+++....+..++-...|++.. |.++|+.-.+++...+++..+.. ...+.+.+...-++.|++.
T Consensus 236 g~Vfgmsv~eTT~Lta~~~~G~L~G~~~~g~~l~~~~~~~~~a~~G~~~~~~~f~lii~a~~~~~~~~~~~~~~l~G~g~ 315 (403)
T PF03209_consen 236 GEVFGMSVGETTRLTAFWGGGTLLGMLLAGFLLSRRLGKKRTAALGCLLGALAFALIILAGPLGSPWLFRPGVFLLGLGN 315 (403)
T ss_pred hHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHhcccchHHHHHHHHHHHhh
Confidence 4668999999999999999999999999999888 67888888888888887776644 4567889999999999999
Q ss_pred hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc----------CChhHHHHHHHHHHHHHHHH
Q psy14075 98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV----------GKTAPFLILSALALGDGLLQ 167 (414)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~----------gw~~~f~~~~~~~~~~~~~~ 167 (414)
|.......+..-|..++ ++.|..+|.+.....++..++..+++.+.|.. ++..+|.+.++..+++.++.
T Consensus 316 G~f~vgals~mM~lt~~-~~aG~~mG~WGaaQA~A~Glg~~~GG~~~D~~~~~~~~~~~~aY~~VF~lEa~ll~~a~~ll 394 (403)
T PF03209_consen 316 GLFTVGALSLMMDLTSA-GRAGLFMGAWGAAQAIARGLGTFLGGALRDLVRALFGNSPALAYGVVFALEAVLLLAALVLL 394 (403)
T ss_pred hHHHHHHHHHHHhCCCC-cchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999984 89999999999999999999999999887642 35566777776666655554
Q ss_pred HHh
Q psy14075 168 LLL 170 (414)
Q Consensus 168 ~~~ 170 (414)
...
T Consensus 395 ~~l 397 (403)
T PF03209_consen 395 GRL 397 (403)
T ss_pred HHh
Confidence 443
No 265
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.20 E-value=6.6e-06 Score=57.15 Aligned_cols=70 Identities=23% Similarity=0.371 Sum_probs=60.4
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHH
Q psy14075 197 AAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLI 267 (414)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~ 267 (414)
+-...++...+...+..++|.|+++ .|+++.+.|.+.++..+..+++.++.|.++||.++++........
T Consensus 5 lk~~yf~~f~~~g~~~Pfl~~~~~~-~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~ 74 (77)
T PF12832_consen 5 LKAFYFFYFAALGCLYPFLPLYLKQ-LGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLF 74 (77)
T ss_pred HHHHHHHHHHHHHHHHhhhhHhhhh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHH
Confidence 3455677778888899999999997 799999999999999999999999999999999988776655443
No 266
>KOG1237|consensus
Probab=98.14 E-value=0.0007 Score=66.25 Aligned_cols=150 Identities=16% Similarity=0.075 Sum_probs=116.0
Q ss_pred hhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHHHHHHHHhhhh---------------
Q psy14075 19 ENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFLSTLIFAFGRT--------------- 82 (414)
Q Consensus 19 ~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~~~~~~~~~~~--------------- 82 (414)
..+.++++.+...+.-..+.+.-......+.++.++|- +||-+++.++.++..++..+..++..
T Consensus 62 ~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~~a~~~~l~p~~~~~~~~~ 141 (571)
T KOG1237|consen 62 TYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTLSAMIPALLPFMCKFKPGG 141 (571)
T ss_pred HHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCccccCCCCC
Confidence 34456777777777777777777778888999999997 67889999999988888655544221
Q ss_pred ----------HHHHHHHHHHHhhhhhhhhhhHHHHHhhcCC---Ccchh--hHHHHHHHHHHhhhhhhchhhhhHhhhhc
Q psy14075 83 ----------YGVLFLARSLQGIGSSCSSVSGMGMLAERYP---DDRER--GNAMGIALGGLALGVLIGPPFGGIMYQFV 147 (414)
Q Consensus 83 ----------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~---~~~~r--~~~~~~~~~~~~~g~~ig~~l~~~l~~~~ 147 (414)
...++.+.-+..+|.|..-|...+.-+|.++ +++++ ..-+.++....+.|..++..+..+.-+..
T Consensus 142 ~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~~~g~l~a~t~~vyiq~~~ 221 (571)
T KOG1237|consen 142 NVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQNGGALLAQTVLVYIQDNV 221 (571)
T ss_pred CcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHHHHHHHHHHHHHHhhhhcc
Confidence 1255666677888999999999999999997 21222 36788889999999999998888888889
Q ss_pred CChhHHHHHHHHHHHHHHHHH
Q psy14075 148 GKTAPFLILSALALGDGLLQL 168 (414)
Q Consensus 148 gw~~~f~~~~~~~~~~~~~~~ 168 (414)
+|.+-|.+..+...++.++.+
T Consensus 222 ~w~lgf~i~~~~~~lai~iF~ 242 (571)
T KOG1237|consen 222 GWKLGFGIPTVLNALAILIFL 242 (571)
T ss_pred cceeeccHHHHHHHHHHHHHH
Confidence 999999988887776655543
No 267
>PF12832 MFS_1_like: MFS_1 like family
Probab=98.02 E-value=1.3e-05 Score=55.72 Aligned_cols=54 Identities=22% Similarity=0.332 Sum_probs=47.5
Q ss_pred cchhhhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHH
Q psy14075 17 ARENRHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIM 70 (414)
Q Consensus 17 ~~~~~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~ 70 (414)
-.|.+.++.|.|+.|+|.+.++..+...++.+++|.++||+++++..+.....+
T Consensus 22 fl~~~~~~~Gl~~~~iGil~~i~~~~~~~~~pl~g~laDk~~~~~~~l~~~~~~ 75 (77)
T PF12832_consen 22 FLPLYLKQLGLSPSQIGILSAIRPLIRFLAPPLWGFLADKFGKRKVILLGSLFM 75 (77)
T ss_pred hhhHhhhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCccHHHHHHHHHH
Confidence 346667889999999999999999999999999999999999998877765543
No 268
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=98.00 E-value=0.015 Score=54.70 Aligned_cols=249 Identities=12% Similarity=0.020 Sum_probs=150.7
Q ss_pred hhhhhcC---CcchHHHHHHHHHH-HHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh---------hh-----
Q psy14075 21 RHKYLMG---ETKAVGVMFGSKAF-VQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG---------RT----- 82 (414)
Q Consensus 21 ~~~~~g~---s~~~~g~~~s~~~~-~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---------~~----- 82 (414)
+++.+.+ .+..+.++-+..-+ +..+..++.+++.+++.|.+++-.-...+....+++++. ++
T Consensus 49 lKDslvv~~~gae~I~FlK~~~vlP~avif~~iy~kl~~~lt~~~vF~~~~~~F~~fF~LFa~Vi~P~~~~~hp~~~~~~ 128 (509)
T COG3202 49 LKDSLVVTRQGAESISFLKTWGVLPSAVIFTIIYQKLLNILTREKVFYIILGFFLGFFALFAFVIYPYKDILHPDPEFSR 128 (509)
T ss_pred hhhheEeecCcchhhHHHHHHHhchHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHHhccccccCCCHHHHH
Confidence 3444443 35566777777777 677888999999999999999988888888888887752 11
Q ss_pred ------------------HHHHHHHHHHHhhhhhhhhh-hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHh
Q psy14075 83 ------------------YGVLFLARSLQGIGSSCSSV-SGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIM 143 (414)
Q Consensus 83 ------------------~~~l~~~r~l~G~~~~~~~~-~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l 143 (414)
.|...+..++.-+-.+.... .-.....|.+. .+|-.|..+.++...+++..++..+..++
T Consensus 129 ~~~~~~p~~l~~~ili~~~Ws~s~~Yi~aELWgslV~S~lFw~faNeitt-~~eakRFy~lf~l~~ni~lllsg~~~~~~ 207 (509)
T COG3202 129 DLFADLPMFLKWFILIVGEWSYSLFYIMAELWGSLVLSLLFWQFANEITT-IEEAKRFYPLFGLGANISLLLSGEVTSWL 207 (509)
T ss_pred HHHhhCCccceeeeEeecchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhh-HHHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 13333444444433333322 44567788888 58899999999999999999999888888
Q ss_pred hhhc-C---------ChhHHHHHHHHHHHHHHHHHHhcc----CCC---C---CCC--CCC----chhhhhccChHHHHH
Q psy14075 144 YQFV-G---------KTAPFLILSALALGDGLLQLLLLQ----PGV---V---KQE--VEP----PTLKSLVMDPYILIA 197 (414)
Q Consensus 144 ~~~~-g---------w~~~f~~~~~~~~~~~~~~~~~~~----~~~---~---~~~--~~~----~~~~~~~~~~~~~~~ 197 (414)
.++- . -+..+.+.+..++++..+..+.-+ ++. + +++ +.+ ++.+.+.|+|.++.+
T Consensus 208 ~k~~~~~~~~~~~~~~~~~~~vi~~~~~i~~~l~~~~~r~il~~~~f~~~~~~kk~~~k~k~~~~~s~k~i~~SkyL~~i 287 (509)
T COG3202 208 SKHRDALASEFKDLLLQILFIVIVILGIIAILLYRYINRNVLTDPLFYLRAKKKKKKKKLKLGLIESFKMILRSKYLGAI 287 (509)
T ss_pred hhchhhHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhHHHhcccccccccCcHHHHHHHHHhhhHHHHH
Confidence 7631 1 233444555544444444443321 111 0 011 111 235567788988888
Q ss_pred HHHHHHHHHHHHhhhhchHHHHHHHhCCCccc---hhhHhHHHHHH-HHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075 198 AGAITFANTGIAMLEPSLPIWMMDTMGADKWQ---QGVSFLPASIS-YLIGTNLFGPLGHRMGRYLAALLGLLIIGI 270 (414)
Q Consensus 198 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~---~g~~~~~~~~~-~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i 270 (414)
.+...+++.+.+.+....-.-.++.+.....- .|-+....++. .++.....+.+.+|.|-....++.-+.+.+
T Consensus 288 al~vl~Y~v~inLvE~~wKs~ik~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~li 364 (509)
T COG3202 288 ALLVLAYGVSINLVEGVWKSGIKELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLI 364 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHH
Confidence 88888888777766554433333322222221 22233444444 444556677888888765554444443333
No 269
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.98 E-value=4.5e-05 Score=71.39 Aligned_cols=109 Identities=17% Similarity=0.263 Sum_probs=89.5
Q ss_pred hhHHHHHHHHHHHHHHHHhh---hh------HHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCc--chhhHHHHHHHHHH
Q psy14075 61 LPMFTGFVIMFLSTLIFAFG---RT------YGVLFLARSLQGIGSSCSSVSGMGMLAERYPDD--RERGNAMGIALGGL 129 (414)
Q Consensus 61 ~~l~~~~~~~~~~~~~~~~~---~~------~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~--~~r~~~~~~~~~~~ 129 (414)
|++.++.+++.+|.++..++ .+ .+.++++-.+.++|.|..-|...++.+|.++++ ++|.+.+.++..+.
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 67788999999998885443 22 367888889999999999999999999999852 35788899999999
Q ss_pred hhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHH
Q psy14075 130 ALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLL 169 (414)
Q Consensus 130 ~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 169 (414)
++|..++..+.+++.++.||.+.|.+.++..++..+..+.
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~ 121 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLS 121 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHC
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999888776554443
No 270
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=97.92 E-value=0.00077 Score=57.78 Aligned_cols=144 Identities=13% Similarity=0.004 Sum_probs=79.8
Q ss_pred chhhHHHHHHHHHHhhhhhhchhhhhHh---hh--hcCChhHHHHHHHHHHHHHHHHHHhccCC---CCC-CC-------
Q psy14075 116 RERGNAMGIALGGLALGVLIGPPFGGIM---YQ--FVGKTAPFLILSALALGDGLLQLLLLQPG---VVK-QE------- 179 (414)
Q Consensus 116 ~~r~~~~~~~~~~~~~g~~ig~~l~~~l---~~--~~gw~~~f~~~~~~~~~~~~~~~~~~~~~---~~~-~~------- 179 (414)
|+|+........+.++|.++....--.- .+ .-.|++.+.+.+++.++.+++..++-++- .++ ++
T Consensus 2 k~K~~~s~~n~~gf~iG~ii~~ipF~~~~~~~~~~~~~W~~I~si~~lL~~IpLIly~ifGk~fd~~~~~~k~~k~~~~~ 81 (267)
T PF07672_consen 2 KKKSILSQFNPWGFNIGTIIVNIPFLISSSVVIALTNNWQWILSIFILLIFIPLILYIIFGKNFDIYSPKEKQEKENSTL 81 (267)
T ss_pred CccceeeeeccccchhhHHHHHhhHHhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccCcccccccccccc
Confidence 5677777777888888887765432111 11 13599999999988888777766664331 111 11
Q ss_pred CCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCcc-------------chhhHhHHHHHHHHhhhh
Q psy14075 180 VEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKW-------------QQGVSFLPASISYLIGTN 246 (414)
Q Consensus 180 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-------------~~g~~~~~~~~~~~~~~~ 246 (414)
+++.+..+.+|++..|...+.+...... .+..+.+.+.......++. .......+.-.+..+|..
T Consensus 82 ~~~~s~~~~LK~K~tw~w~~~Yg~wLv~--~V~p~t~~~~~~~~~~s~~ni~~~~~~~~~~~~~~~~~I~fv~g~~~G~~ 159 (267)
T PF07672_consen 82 SKKPSYKSILKEKETWKWILIYGIWLVV--VVFPFTPSWFNILIWISPANIKSVVSGGGFNWIIPIFQILFVAGYFLGPF 159 (267)
T ss_pred cccchHHHHHccchHHHHHHHHHHHhee--EEEeccchhHhHhhhcCcccccccccccccchhhHHHHHHHHHHHhhhce
Confidence 1235677899999888765554443321 2223233333322222222 112333444455556767
Q ss_pred hhhhhhhh-hhhHHHH
Q psy14075 247 LFGPLGHR-MGRYLAA 261 (414)
Q Consensus 247 ~~g~l~d~-~~~~~~~ 261 (414)
..|...+. ++||+.+
T Consensus 160 ~ig~~nkt~~kRk~fi 175 (267)
T PF07672_consen 160 TIGLWNKTNYKRKPFI 175 (267)
T ss_pred eeccchhhhhhhhhHH
Confidence 77777764 4555544
No 271
>PF06963 FPN1: Ferroportin1 (FPN1); InterPro: IPR009716 This entry represents the solute carrier family 40 member 1 family of proteins, also known as Ferroportin 1. It is thought to be involved in iron export from duodenal epithelial cells and also in transfer of iron between maternal and fetal circulation. This family of proteins is known to be localised in the basolateral membrane of polarized epithelial cells [].; GO: 0005381 iron ion transmembrane transporter activity, 0034755 iron ion transmembrane transport, 0016021 integral to membrane
Probab=97.87 E-value=0.0018 Score=60.92 Aligned_cols=178 Identities=13% Similarity=0.085 Sum_probs=108.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q psy14075 193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICL 272 (414)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~ 272 (414)
..+.++...++.....-+...-.|.++.+.+..+-.-.+.+-....+..++.....|.+.||.+|.+....+.+..-++.
T Consensus 3 ~~~~Ly~sh~ls~w~dR~w~Fa~~L~L~~i~p~sLl~~siygl~~~~~~~~f~~~vG~~iD~~~Rl~~~~~~l~~Qn~sv 82 (432)
T PF06963_consen 3 ALWRLYLSHFLSTWGDRMWEFAVPLFLISIFPGSLLPVSIYGLVRSLSAILFGPWVGRWIDRSPRLKVIRTSLVVQNLSV 82 (432)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHHHhhHHHHHHHhCCcchhhHHHHHHHHHHHH
Confidence 44566777778778778888888999988765554444555555566777777888999999999887666544432221
Q ss_pred ----HHhh--hh-hhh----HHHHHHHHHHHHHHHhhhhhhhhhhhhhhh--------cccccchhhHHhHHHHHHHHHH
Q psy14075 273 ----MMIP--LA-RNI----NHLIVPNAGLGFAIGMVDSSMMPELGYLVD--------IRHTAVYGSVYAIGDVAFCLGF 333 (414)
Q Consensus 273 ----~~~~--~~-~~~----~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~--------~~~~~~~g~~~g~~~~~~~~g~ 333 (414)
.++. +. +.. ......++......+...-..........| ..+++...+.++.+.-+-.+..
T Consensus 83 ~~s~~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~i~~Las~~~~iavERDWVvvi~~~~~~~La~~NA~mRRIDL~ck 162 (432)
T PF06963_consen 83 AASCALFLLLLSYPSSSSQSSWLFIALFALLILLGAIERLASIANTIAVERDWVVVIAGGDPGALARMNATMRRIDLFCK 162 (432)
T ss_pred HHHHHHHHHHHhCCccccccchHHHHHHHHHHHHHHHHHHHHhhhhheeccchhhhhcCCChhhHHHHHHHHHHHHHHHH
Confidence 1111 11 110 111111111111112111111111111111 1245556788888888888899
Q ss_pred hHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy14075 334 AIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 334 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 370 (414)
.++|.+.|.+.+..++.....+.++..+++..+-+++
T Consensus 163 llaPl~vG~l~t~~s~~~~~~~i~~~N~~S~~vEy~~ 199 (432)
T PF06963_consen 163 LLAPLFVGLLMTFASPVIAAIFIAGWNLASVFVEYFL 199 (432)
T ss_pred HHHHHHHHHHhhccCHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999998998888888888888877665443
No 272
>PF03137 OATP: Organic Anion Transporter Polypeptide (OATP) family; InterPro: IPR004156 This family consists of several eukaryotic Organic-Anion-Transporting Polypeptides (OATPs). Several have been identified mostly in human and rat. Different OATPs vary in tissue distribution and substrate specificity. Since the numbering of different OATPs in particular species was based originally on the order of discovery, similarly numbered OATPs in humans and rats did not necessarily correspond in function, tissue distribution and substrate specificity (in spite of the name, some OATPs also transport organic cations and neutral molecules) so a scheme of using digits for rat OATPs and letters for human ones was introduced []. Prostaglandin transporter (PGT) proteins are also considered to be OATP family members. In addition, the methotrexate transporter OATK is closely related to OATPs. This family also includes several predicted proteins from Caenorhabditis elegans and Drosophila melanogaster. This similarity was not previously noted. Note: Members of this family are described (in the UniProtKB/Swiss-Prot database) as belonging to the SLC21 family of transporters.; GO: 0005215 transporter activity, 0006810 transport, 0016020 membrane; PDB: 3MRR_P.
Probab=97.83 E-value=2.3e-06 Score=83.26 Aligned_cols=157 Identities=18% Similarity=0.168 Sum_probs=1.5
Q ss_pred HHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-----------h------
Q psy14075 218 WMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-----------N------ 280 (414)
Q Consensus 218 ~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----------~------ 280 (414)
-++++++++..+.|++.+.+-++.++..++..++.+|.+|-|.+..+.++++++.+++.+-+ +
T Consensus 28 tiErRF~l~S~~~G~i~s~~di~~~~~~~~vsy~g~~~hrprwig~g~~~~~~g~~l~~lPhf~~~~y~~~~~~~~~~~~ 107 (539)
T PF03137_consen 28 TIERRFGLSSSQSGLISSSYDIGSLVVVLFVSYFGGRGHRPRWIGIGALLMGLGSLLFALPHFLSGPYSYEEASNSNGNS 107 (539)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCCcceeeecHHHHHHHHHHHhccHhhcCCCcccccccccccc
Confidence 46788999999999999999999999999999999999998899999999999887765310 0
Q ss_pred ---------------------------------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHH
Q psy14075 281 ---------------------------------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDV 327 (414)
Q Consensus 281 ---------------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~ 327 (414)
...+++..++.|+|..-.+ .--.+++-|..+++..+...|+...
T Consensus 108 ~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~gq~l~GiG~~pl~---tLG~tYiDDnv~~~~splYiGi~~~ 184 (539)
T PF03137_consen 108 SISSNLCDSSSSSQASSDCQDCCSSSSSSLSGYFYVFILGQLLIGIGATPLY---TLGITYIDDNVSKKNSPLYIGILYA 184 (539)
T ss_dssp --------------------------------------------SSS---------------------------------
T ss_pred ccccccccccccccccCccccccccccccchHHHHHHHHHHHHHhccccCCc---cceeeeeccccccccCccchhhhhH
Confidence 0112334444455444333 2334556678888888889999988
Q ss_pred HHHHHHhHHHHHHHHHHhh---------------------hc-hHHHHHHHHHHHHHHHHHHHHhcCCCchh
Q psy14075 328 AFCLGFAIGPAMSGTLVNT---------------------IG-FEWMLFIIAILDFMYAPLLYLLRNPPTKE 377 (414)
Q Consensus 328 ~~~~g~~ig~~~~g~l~~~---------------------~g-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 377 (414)
...+|-++|-.+++...+. .| |-..|.+.+.+.++..+..+.++|+..+.
T Consensus 185 ~~~lGPa~Gf~lg~~~L~~yvD~~~~~~~~~~i~p~dp~WvGAWWLGfli~g~~~~l~aipl~~FPk~lp~~ 256 (539)
T PF03137_consen 185 MSILGPALGFLLGSFCLRIYVDFPKVPPDGVGITPSDPRWVGAWWLGFLICGILLFLSAIPLFFFPKKLPGT 256 (539)
T ss_dssp ------------------------------------------------------------------------
T ss_pred HhhccHHHHHHHHHHHHhceeCCccccccCCCCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCCc
Confidence 8888888877777766532 12 33345556666666666666666654443
No 273
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=97.78 E-value=0.011 Score=56.24 Aligned_cols=106 Identities=13% Similarity=0.068 Sum_probs=58.3
Q ss_pred hhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHH--h-h---------hhhhhHHHHHHHHHHHHHHHhh
Q psy14075 231 GVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMM--I-P---------LARNINHLIVPNAGLGFAIGMV 298 (414)
Q Consensus 231 g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~--~-~---------~~~~~~~~~~~~~~~g~~~~~~ 298 (414)
-..+..++++-.+|+.+..+..-.-.+.+.+.+..++-.+..-+ + . ..++.+...+.++++|+..|..
T Consensus 310 ~i~~~~fNvgD~vGR~~~~~~~~p~~~~~~l~i~s~~R~iFIPlf~lcn~~~~~~~p~~~~~d~~~~~~~~l~gltnGy~ 389 (437)
T TIGR00939 310 IICFLLFNLFDWLGRSLTSKFMWPDEDSRWLPILSFLRVLFIPLFLLCNYPQRSRLPVFFPGDAYFIILMLLFGFSNGYL 389 (437)
T ss_pred HHHHHHHHHHHHHHhhhhheeEeeCCCccchHHHHHHHHHHHHHHHHhcCCccccCCeeecccHHHHHHHHHHHHhhhHH
Confidence 45667788899999986654321111111222222222211111 1 1 2235556667788889888877
Q ss_pred hhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075 299 DSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM 339 (414)
Q Consensus 299 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~ 339 (414)
.+.... +..+..++++|..+-.++...-.+|-.+|..+
T Consensus 390 ~s~~m~---~~p~~v~~~e~e~aG~~~~~~l~~Gl~~Gs~l 427 (437)
T TIGR00939 390 GSLSMC---LAPRQVDPHEREVAGALMVIFLLVGLALGAVL 427 (437)
T ss_pred HHHHHH---hcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 544332 33444556677777777777777777776655
No 274
>PRK03612 spermidine synthase; Provisional
Probab=97.72 E-value=0.0075 Score=58.74 Aligned_cols=161 Identities=17% Similarity=0.053 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHH-HHHHH-HHHHHHhh
Q psy14075 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALL-GLLII-GICLMMIP 276 (414)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~-~~~~~-~i~~~~~~ 276 (414)
+..++..++...........+...+|.+..+.+.+.+.+..+..+|+.+.+++.++..++....- ...+. .++..++.
T Consensus 21 ~~~f~sg~~~L~yEv~~~r~l~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~~~~~e~~i~l~~~~~~~ll~ 100 (521)
T PRK03612 21 AAVFVCAACGLVYELLLGTLASYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAGFVAVELLLALLGGLSALILY 100 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455555555556666666788888888888888888999999888887644333322111 11111 11111111
Q ss_pred hhhh-----hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh-hhchH
Q psy14075 277 LARN-----INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN-TIGFE 350 (414)
Q Consensus 277 ~~~~-----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~-~~g~~ 350 (414)
.... ........++.++..|+..| ...........+..|...|-......+|+.+|+.+.+++.- ..|..
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~l~G~~~P----l~~~~~~~~~~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~ 176 (521)
T PRK03612 101 AAFAFQGLSRLLLYVLVLLIGLLIGMEIP----LLMRILQRIRDQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLI 176 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHHHHhccccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchH
Confidence 1111 11122233344555555533 33333332222234667777788888999999999988764 67765
Q ss_pred HHHHHHHHHHHHH
Q psy14075 351 WMLFIIAILDFMY 363 (414)
Q Consensus 351 ~~~~~~~~~~~~~ 363 (414)
....+.+.+.++.
T Consensus 177 ~t~~~~a~l~~~~ 189 (521)
T PRK03612 177 RTAALTGSLNLLA 189 (521)
T ss_pred HHHHHHHHHHHHH
Confidence 5544444444333
No 275
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=97.70 E-value=0.0047 Score=49.41 Aligned_cols=107 Identities=19% Similarity=0.156 Sum_probs=79.6
Q ss_pred HhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q psy14075 233 SFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDI 312 (414)
Q Consensus 233 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 312 (414)
-.++......++.++.+.+.+++|.|+.+.++.+...+-.... +-++.+.++....+.|++.+..+..... ++.+.
T Consensus 42 slai~Y~~~~~s~l~~P~iv~~lg~K~sm~lg~~~y~~y~~~~-~~~~~~~l~~~s~l~G~~~a~lW~aqg~---ylt~~ 117 (156)
T PF05978_consen 42 SLAILYGSFAISCLFAPSIVNKLGPKWSMILGSLGYAIYIASF-FYPNSYTLYPASALLGFGAALLWTAQGT---YLTSY 117 (156)
T ss_pred HHHHHHHHHHHHHHhHHHHHHHHhhHHHHHHHHHHHHHHHHHH-HhhhHHHHHHHHHHHhhhhHHhhHhhhH---HHHHc
Confidence 4455566677778888999999999999999988887654443 3345677788888999999988766554 45566
Q ss_pred ccccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075 313 RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTL 343 (414)
Q Consensus 313 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l 343 (414)
..++.+++..++.-...+.+..+|..+.-.+
T Consensus 118 s~~~~~~~~~~ifw~i~~~s~i~G~~~~~~~ 148 (156)
T PF05978_consen 118 STEETIGRNTGIFWAIFQSSLIFGNLFLFFI 148 (156)
T ss_pred CCHHHHhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6677888888888777777777777665444
No 276
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=97.66 E-value=0.0042 Score=55.68 Aligned_cols=151 Identities=25% Similarity=0.430 Sum_probs=96.8
Q ss_pred HHHHhhhhchHHHHHHHhCCCc--cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhh--h
Q psy14075 206 TGIAMLEPSLPIWMMDTMGADK--WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARN--I 281 (414)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~g~~~--~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~--~ 281 (414)
..........+.+..+ .+.+. ...++......+...++.++.|.+.||.|||+.+..+.....++.+...+..+ .
T Consensus 16 ~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~d~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (338)
T COG0477 16 LDLGLLSPALPLLLST-LSLSSGRLLYGLLLSAFFLGYAIGSLLAGPLGDRYGRRKVLIIGLLLFLLGTLLLALAPNVGL 94 (338)
T ss_pred HhcchHHHHHHHHHHH-cCCCchhHHHHHHHHHHHHHHHHHhhhhhhccccccchHHHHHHHHHHHHHHHHHHhCccchH
Confidence 3333344455555555 34444 36788888888899998899999999999987777776554444444444443 4
Q ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccc-cchhhHHhHHHH-HHHHHHhHHHHHHHHHHhh--hchHHHHHHHH
Q psy14075 282 NHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHT-AVYGSVYAIGDV-AFCLGFAIGPAMSGTLVNT--IGFEWMLFIIA 357 (414)
Q Consensus 282 ~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~-~~~~g~~ig~~~~g~l~~~--~g~~~~~~~~~ 357 (414)
+.........|++.+...+..... ..+..|+ +.++...+.... ...++..++|.+.+.+.+. .+|+..|....
T Consensus 95 ~~~~~~~~~~g~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (338)
T COG0477 95 ALLLILRLLQGLGGGGLLPVASAL---LSEWFPEATERGLAVGLVTLGAGALGLALGPLLAGLLLGALLWGWRAAFLLAA 171 (338)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHH---HHHhcCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHH
Confidence 445555555667766554444433 4455554 567888888777 5777888888777777654 45666555444
Q ss_pred HHH
Q psy14075 358 ILD 360 (414)
Q Consensus 358 ~~~ 360 (414)
...
T Consensus 172 ~~~ 174 (338)
T COG0477 172 LLG 174 (338)
T ss_pred HHH
Confidence 433
No 277
>KOG2563|consensus
Probab=97.66 E-value=0.00098 Score=61.60 Aligned_cols=127 Identities=13% Similarity=-0.004 Sum_probs=87.8
Q ss_pred HHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh-----h-hH--HHHHH
Q psy14075 216 PIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR-----N-IN--HLIVP 287 (414)
Q Consensus 216 ~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~-----~-~~--~~~~~ 287 (414)
..|..+.+| +...+-++..++.+..+...+.+-|+.||+|-|....++..+..++..+=..+. + .+ .....
T Consensus 68 ~n~~~~~Yg-s~~~~~wlsmIym~v~vp~gf~~mw~ldk~GLR~a~llgt~ln~iGa~Ir~iss~p~v~~~f~~~l~~~G 146 (480)
T KOG2563|consen 68 NNYVNSFYG-SSSAADWLSMIYMVVSVPFGFAAMWILDKFGLRTALLLGTVLNGIGAWIRLISSLPFVPPLFRRPLTHTG 146 (480)
T ss_pred HHHHHHHhc-chHHHHHHHHHHHHHHHHHhhHHHHhhcccchHHHHHHHHHHHHHHHHHhhhccCccccccchhhhhHHh
Confidence 345566677 556677888889999999999999999999999999999999999876544432 1 12 22233
Q ss_pred HHHHHHHHHhhhhhhhhhhhhhh-hcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhh
Q psy14075 288 NAGLGFAIGMVDSSMMPELGYLV-DIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTI 347 (414)
Q Consensus 288 ~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~ 347 (414)
..+.+...-+. ..+-+.+. --+++++|+.+..+..+...+|.+++..+-..+..+.
T Consensus 147 q~iaa~Aq~Fi----m~lPskiA~~WF~~~qra~A~~~~v~~n~LGvavg~llppilV~~~ 203 (480)
T KOG2563|consen 147 QSIAAAAQPFI----LGLPSKIAAVWFPPDQRAIATVLGVMGNPLGVAVGFLLPPILVPSS 203 (480)
T ss_pred HHHHHHhhhHh----hccccHHHHhhCCcchhhhhhhHHHhcchHHHHHHhhccceecCCC
Confidence 33333333222 11112222 3478999999999988888899888888777766543
No 278
>PF00854 PTR2: POT family; InterPro: IPR000109 This entry represents the POT (proton-dependent oligopeptide transport) family, which all appear to be proton dependent transporters. The transport of peptides into cells is a well-documented biological phenomenon which is accomplished by specific, energy-dependent transporters found in a number of organisms as diverse as bacteria and humans. The POT family of proteins is distinct from the ABC-type peptide transporters and was uncovered by sequence analyses of a number of recently discovered peptide transport proteins []. These proteins that seem to be mainly involved in the intake of small peptides with the concomitant uptake of a proton []. These integral membrane proteins are predicted to comprise twelve transmembrane regions.; GO: 0005215 transporter activity, 0006857 oligopeptide transport, 0016020 membrane; PDB: 4APS_A 2XUT_C.
Probab=97.60 E-value=0.00051 Score=64.31 Aligned_cols=116 Identities=14% Similarity=0.100 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHHHHHHhhhhh---------hhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHH
Q psy14075 259 LAALLGLLIIGICLMMIPLAR---------NINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAF 329 (414)
Q Consensus 259 ~~~~~~~~~~~i~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~ 329 (414)
|+++++.++..+|.+++..+. +...+.+.+.+.++|.|..-+...+..++-.+..+++++.+.+..+....
T Consensus 2 ktI~~g~~~~~~G~~ll~l~~~~~~~~~~~~~~~~~~gL~lia~G~G~~K~ni~~~~~dq~~~~~~~~~~~~F~~fY~~i 81 (372)
T PF00854_consen 2 KTILLGSIVYLLGHVLLTLSAIPPSLPSGIQLGLFYIGLALIAVGTGGIKPNISPFGADQYDEDDDSRRDSFFNWFYWGI 81 (372)
T ss_dssp HHHHHHHHHHHHHHHH--HHHTSSSC------CHHHHHHHHHHHHHHCCHHHHHHHHHHCSSTTTTTHHHHHHHHHHHHH
T ss_pred HhhhHHHHHHHHHHHHhHHHHhcchhhhhHHHHHHHHHHHHHHhccccccccHHHHHHHHhcccchhhhhhhHHHHHHHH
Confidence 467788888888887755432 12467788888999999998888877665555444556788888999999
Q ss_pred HHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy14075 330 CLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLLRNPP 374 (414)
Q Consensus 330 ~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 374 (414)
++|..+++...+++.++.||...|.+.++..+++.+..+.-++..
T Consensus 82 n~G~~~~~~~~~~i~~~~~~~~~f~i~~~~~~~~~~~f~~~~~~y 126 (372)
T PF00854_consen 82 NIGSLFSPTLVPYIQQNYGWFLGFGIPAIGMLLALIVFLSGRKRY 126 (372)
T ss_dssp HHHHHHHHHCCCHHHHCS-HHHHHHHHHHHHHHHHHHHHCCCCTT
T ss_pred hhhhHhhcccchhhccccchhhhhhHHHHHHHHHHHHHHhCCcCC
Confidence 999999999999999999999999999999888887766655443
No 279
>KOG3626|consensus
Probab=97.59 E-value=0.00076 Score=66.64 Aligned_cols=175 Identities=17% Similarity=0.108 Sum_probs=121.4
Q ss_pred HHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhh
Q psy14075 200 AITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLAR 279 (414)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~ 279 (414)
..+...+.. .+....-.-+++.++++..+.|++...+-++..+...+..+...|.+|-+++-++.++++++.++..+.+
T Consensus 105 ~~~~q~l~~-~y~~s~IttiErRF~i~Ss~sG~I~s~~dig~~l~i~fVsYfG~r~HrPr~Ig~G~~~m~lgsll~alPH 183 (735)
T KOG3626|consen 105 AAFAQGLYV-GYFNSVITTIERRFKISSSQSGLIASSYDIGNLLLIIFVSYFGSRGHRPRWIGIGLVLMGLGSLLFALPH 183 (735)
T ss_pred HHHHHHhhh-hhhhhhhhhhhhhcCCCCCcceeEeeecccchhhhhHhHHHhccccCccceeeechhHHHHHHHHHhChH
Confidence 333333333 3333333447888999999999999999999999999999999999999999999999998877664310
Q ss_pred -------------------h--------------------------------hH-HHHHHHHHHHHHHHhhhhhhhhhhh
Q psy14075 280 -------------------N--------------------------------IN-HLIVPNAGLGFAIGMVDSSMMPELG 307 (414)
Q Consensus 280 -------------------~--------------------------------~~-~~~~~~~~~g~~~~~~~~~~~~~~~ 307 (414)
+ .+ .+.+..++.|+|....++. -++
T Consensus 184 f~~~~y~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~llff~~q~l~GIG~Tpi~tl---Gis 260 (735)
T KOG3626|consen 184 FFSGPYEYELEVIKQSVENPSSSLSFCCCNKSTNLCRPSPENSKREKESTSYPFLLFFLGQLLLGIGATPIFTL---GIS 260 (735)
T ss_pred HhcCcchhhhhhhhccccCCccccchhhccCCccccCCCCCcccccccCCchhHHHHHHHHHHhhcCCCCCccC---CCc
Confidence 0 01 1233444444444333332 234
Q ss_pred hhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhh------------------hc-hHHHHHHHHHHHHHHHHHHH
Q psy14075 308 YLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNT------------------IG-FEWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 308 ~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~------------------~g-~~~~~~~~~~~~~~~~~~~~ 368 (414)
++-|...++......|+..++.-+|-++|=.+++++... .| |-..|++.+.+.++..+..+
T Consensus 261 YiDDnvk~~~SplYlgi~~~~~~lGPaiGfllgS~~l~lYvD~~~~~~~it~~DPrWIGAWWlGFLi~g~~~~~~a~p~f 340 (735)
T KOG3626|consen 261 YIDDNVKKKNSPLYLGILYSMAILGPAIGFLLGSFCLKLYVDFGLSPIGITPTDPRWIGAWWLGFLICGALLLFSAVPLF 340 (735)
T ss_pred cccccccccCCcHHHHHHHHHHHhhhHHHHHHHHHHHHeeeccccCCCCCCCCCcchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 455666777778899999988888888888888776542 12 45567778888888888888
Q ss_pred HhcCCCchhh
Q psy14075 369 LLRNPPTKEE 378 (414)
Q Consensus 369 ~~~~~~~~~~ 378 (414)
++++..++..
T Consensus 341 ~fPk~lp~~~ 350 (735)
T KOG3626|consen 341 FFPKELPKSQ 350 (735)
T ss_pred hCcccCcccc
Confidence 8887665543
No 280
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=97.56 E-value=0.0013 Score=61.00 Aligned_cols=129 Identities=10% Similarity=0.130 Sum_probs=83.1
Q ss_pred HhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhc
Q psy14075 233 SFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDI 312 (414)
Q Consensus 233 ~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 312 (414)
......+-.++..++..+..+|++-+.-+..+..++.+++++..++++.+.-++..++.+++.|.....+.... ..
T Consensus 64 Vlladi~P~l~~Kl~aP~fi~~v~y~~Ri~~~~~l~~~g~l~va~~~~v~~~l~Gv~las~ssg~GE~tfL~lt----~~ 139 (402)
T PF02487_consen 64 VLLADILPSLLVKLIAPFFIHRVPYWIRILICVALSAAGMLLVAFSPSVWVRLLGVVLASLSSGLGEVTFLSLT----HF 139 (402)
T ss_pred HHHHHHHHHHHHHHHhHhhhhhccchHHHHHHHHHHHHHHhheeeccchhHHHHHHHHHhhhhhhhHHHHHHHH----Hh
Confidence 44445556666777788888988755555667778888888888888888778888888888888866555443 23
Q ss_pred ccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHHHHHHHHh
Q psy14075 313 RHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG--FEWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 313 ~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g--~~~~~~~~~~~~~~~~~~~~~~ 370 (414)
+++. ..+-..+....++.+|+...-.+.+ .| .+..+.....+.++-.+..++.
T Consensus 140 y~~~----~l~~wssGTG~aGl~Ga~~y~~lT~-~g~s~~~tll~~~~lp~~~~~~~f~~ 194 (402)
T PF02487_consen 140 YGKS----SLSAWSSGTGGAGLVGALYYLGLTT-LGLSPRTTLLIMLVLPAIFLLSYFFL 194 (402)
T ss_pred cCcc----ccccccCCcChhhHHHHHHHHHHHH-hCcCHHHHHHHHHHHHHHHHHHHHHh
Confidence 3332 2222333344566666666655555 45 5667777666665554444433
No 281
>PF06779 DUF1228: Protein of unknown function (DUF1228); InterPro: IPR010645 This entry represents the N terminus of several putative bacterial membrane proteins, which may be sugar transporters. Note that many members are hypothetical proteins.
Probab=97.48 E-value=0.0008 Score=47.22 Aligned_cols=77 Identities=22% Similarity=0.216 Sum_probs=65.3
Q ss_pred HHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHH
Q psy14075 207 GIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHL 284 (414)
Q Consensus 207 ~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 284 (414)
+-+.+...+|...++ .++|..+.+++-+.+.++..+|.+...++.++.++++.+..+.+...+..+.+.+.++.+.+
T Consensus 7 gRFayTplLP~M~~~-~~ls~~~ag~lasaNy~GYL~GAl~~~~~~~~~~~~~~~~~~l~~~~~~~~~ma~~~~~~~w 83 (85)
T PF06779_consen 7 GRFAYTPLLPLMQAD-GGLSLSQAGWLASANYLGYLVGALLASRLPRHSRPRRLLRAGLLLTVLSTAAMALTHSFWLW 83 (85)
T ss_pred HHHHHHhHhHHHHHh-cCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHHHHHhchHHH
Confidence 344556678886655 79999999999999999999999999999998888888999999999998888888776543
No 282
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=97.27 E-value=0.034 Score=53.20 Aligned_cols=147 Identities=8% Similarity=-0.096 Sum_probs=86.1
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCC-----ccchhhHhHHHHHHHHhh-hhhhhhhhhhhhhHHHHHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGAD-----KWQQGVSFLPASISYLIG-TNLFGPLGHRMGRYLAALLGL 265 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----~~~~g~~~~~~~~~~~~~-~~~~g~l~d~~~~~~~~~~~~ 265 (414)
|++....+..++..+.++.. .-++|....+ .+...++.....+...+. .++.+++++|++|+++.....
T Consensus 7 ~k~~~~~l~fF~il~~Y~iL-----R~lKD~lvv~~~~~gae~i~fLk~~~~lp~~~~~~~ly~~l~~~~~~~~lf~~~~ 81 (472)
T TIGR00769 7 KKFLPLFLMFFCILFNYTIL-----RDTKDTLVVTAKGSGAEIIPFLKTWVVVPMAVIFMLIYTKLSNILSKEALFYTVI 81 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHH-----HhhhhheeecccCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHhHHHHH
Confidence 45555555555555554433 2245665552 245566665555554444 778899999999998877655
Q ss_pred HHHHHHHHHhhhh-----hh--------------------------hHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhccc
Q psy14075 266 LIIGICLMMIPLA-----RN--------------------------INHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRH 314 (414)
Q Consensus 266 ~~~~i~~~~~~~~-----~~--------------------------~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 314 (414)
......++++.+. +. .|...+.-+..-+-.....+ ....+...|...
T Consensus 82 ~~F~~~f~lF~~vl~p~~~~~~p~~~~~~~~~~~~~~~~~~i~~~~~W~~~~FYv~~elw~~~vvS--~lFW~fandi~t 159 (472)
T TIGR00769 82 SPFLGFFALFAFVIYPLSDLLHPTALADKLLSLLPPGFMGFIAILRIWSFALFYVMAELWGSVVLS--LLFWGFANQITT 159 (472)
T ss_pred HHHHHHHHHHHHHHhcchhhcCCcHHHHHHHhhcchhhHHHHHHHhhhhHHHHHHHHHHHHHHHHH--HHHHHHHHhcCC
Confidence 5555544443332 00 11111111111111111111 122345678888
Q ss_pred ccchhhHHhHHHHHHHHHHhHHHHHHHHHHh
Q psy14075 315 TAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN 345 (414)
Q Consensus 315 ~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~ 345 (414)
.++..+-+++.....++|..+++.+..++.+
T Consensus 160 ~~qakRfy~l~~~ganlg~i~sg~~~~~~~~ 190 (472)
T TIGR00769 160 IDEAKRFYALFGLGANVALIFSGRTIKYFSK 190 (472)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8888999999999999999999999888763
No 283
>KOG0637|consensus
Probab=96.98 E-value=0.0045 Score=57.43 Aligned_cols=149 Identities=20% Similarity=0.222 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh----hhhHHHH-HHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR----MGRYLAA-LLGLL 266 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~----~~~~~~~-~~~~~ 266 (414)
++........+...+++..-..+.|.|+++ .|.+....+......-+.+.+-+++.|..+|| +||||.. ..+..
T Consensus 32 ~~li~v~~ia~Gvqf~wA~elsy~tPyl~~-lGvphk~~S~iw~~gPi~G~~vQP~vG~~SDrc~sr~GRRRPfI~~~s~ 110 (498)
T KOG0637|consen 32 RKLISVASIAAGVQFGWALELSYLTPYLQS-LGVPHKWSSIIWLCGPLSGLLVQPLVGSASDRCTSRYGRRRPFILAGSL 110 (498)
T ss_pred HHHHHHHHHHHHHHHHHHHHhccccHHHHH-cCCCcccccccccccccccceecccccccccccccccccccchHHHhhH
Confidence 344444555555667777788899999988 69999999998888888999999999999996 6776554 45666
Q ss_pred HHHHHHHHhhhhhhhH------------HHHHHHHHHHHH--HHhhhhhhhhhhhhhhhcccccchhh-HHhHHHHHHHH
Q psy14075 267 IIGICLMMIPLARNIN------------HLIVPNAGLGFA--IGMVDSSMMPELGYLVDIRHTAVYGS-VYAIGDVAFCL 331 (414)
Q Consensus 267 ~~~i~~~~~~~~~~~~------------~~~~~~~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~g~-~~g~~~~~~~~ 331 (414)
..++++.+++++.+.. ...+...+.|+- --.......+.=++..|....+++-+ +++.+.....+
T Consensus 111 ~i~~~l~Lig~aaDig~~lgd~~~~~~~~rai~~~~lg~~LLD~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~av 190 (498)
T KOG0637|consen 111 LIAVSLFLIGYAADIGLLLGDNERKPVKPRAIVLFILGFWLLDVANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAV 190 (498)
T ss_pred HHHHHHhhhhhHhhhhHHhcCCcccccchHHHHHHHHHhHHHHhhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHh
Confidence 6677777777654321 122223333321 11122223333344555544444444 88888888888
Q ss_pred HHhHHHHHHH
Q psy14075 332 GFAIGPAMSG 341 (414)
Q Consensus 332 g~~ig~~~~g 341 (414)
|+.+|-.+.+
T Consensus 191 GnvLGY~~g~ 200 (498)
T KOG0637|consen 191 GNVLGYALGS 200 (498)
T ss_pred cceeeeeccc
Confidence 8888766655
No 284
>PRK03612 spermidine synthase; Provisional
Probab=96.82 E-value=0.029 Score=54.70 Aligned_cols=143 Identities=19% Similarity=0.158 Sum_probs=89.5
Q ss_pred hhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHH--HH-HHHHHH----HhhhhH-HHHHHHHHHH
Q psy14075 22 HKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVI--MF-LSTLIF----AFGRTY-GVLFLARSLQ 93 (414)
Q Consensus 22 ~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~--~~-~~~~~~----~~~~~~-~~l~~~r~l~ 93 (414)
..-+|.+..+.+.+.+++..+.++++.+.+++.++--++ ...+-..+ .+ ++..+. ++.... ..++..-++.
T Consensus 42 ~~~~G~s~~~~~~ii~~fl~glalGs~l~~~~~~~~~~~-~~~~e~~i~l~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~ 120 (521)
T PRK03612 42 SYLLGDSVTQFSTVIGLMLFAMGVGALLSKYLLRDAAAG-FVAVELLLALLGGLSALILYAAFAFQGLSRLLLYVLVLLI 120 (521)
T ss_pred HHHhCchHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345677888899999999999999999999887432222 22221111 11 111111 111111 1223344567
Q ss_pred hhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh-hhcCChhHHHHHHHHHHHHHHHH
Q psy14075 94 GIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY-QFVGKTAPFLILSALALGDGLLQ 167 (414)
Q Consensus 94 G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~-~~~gw~~~f~~~~~~~~~~~~~~ 167 (414)
++..|+..|....+..+.. +++-++..|.......+|.++|.++.+++. ..+|-....++.+.+.++..++.
T Consensus 121 ~~l~G~~~Pl~~~~~~~~~--~~~~g~~~g~ly~~ntlGa~~G~l~~~~vLlp~lG~~~t~~~~a~l~~~~a~~~ 193 (521)
T PRK03612 121 GLLIGMEIPLLMRILQRIR--DQHLGHNVATVLAADYLGALVGGLAFPFLLLPRLGLIRTAALTGSLNLLAALVF 193 (521)
T ss_pred HHHHHHHHHHHHHHHHhcc--ccchhhhhhhhHhHHhHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHH
Confidence 8888888888777665542 235678889999999999999999887765 46776555555555555544433
No 285
>KOG3880|consensus
Probab=96.76 E-value=0.015 Score=51.17 Aligned_cols=137 Identities=16% Similarity=0.222 Sum_probs=96.8
Q ss_pred HHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhc
Q psy14075 32 VGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAER 111 (414)
Q Consensus 32 ~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~ 111 (414)
.|.+.-+-.+...+..+......||+---.=..+..++.+.+..+.+++++.++=+.+-.+..++.|..-..-.++-+.
T Consensus 64 tg~VLLaDilPsL~iKl~~Pff~~rfpf~~Ri~~~v~~sa~s~~lVafs~s~~~sL~GV~~aSissGlGEiTFL~lss~- 142 (409)
T KOG3880|consen 64 TGAVLLADILPSLAIKLTAPFFIHRFPFGFRIALVVLLSALSFFLVAFSNSVPMSLLGVVFASISSGLGEITFLALSSR- 142 (409)
T ss_pred cchhhhhhhhHHHHHHHhchhhhhhcccchHHHHHHHHHhcceEEEEeccchhHHHhhhhhhhhcCCcceeehhhhhcc-
Confidence 4666667777888888888889999765444455667778888888999999999999888888888776665544433
Q ss_pred CCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh--cCChhHHHHHHHHHHHHHHHHHHhccCC
Q psy14075 112 YPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF--VGKTAPFLILSALALGDGLLQLLLLQPG 174 (414)
Q Consensus 112 ~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~~~~~~ 174 (414)
++ ....+.++.+.+.++++|..--..+.+. ++.|.+.++...+.++.+...++.++++
T Consensus 143 Y~-----~~~i~~WSSGTGgAGliGa~SYa~lT~~~~~spk~Tlli~l~lP~lfa~~yf~lL~~p 202 (409)
T KOG3880|consen 143 YP-----SIVIAGWSSGTGGAGLIGASSYAFLTSWANLSPKSTLLIMLFLPALFAFAYFFLLKSP 202 (409)
T ss_pred CC-----CceeccccCCCCcchhhhhhHHHHHhhhcCCChhhHHHHHHHHHHHHHHHHHheeCCC
Confidence 33 2334555666666666666554555542 4578888888888888777777776543
No 286
>KOG1237|consensus
Probab=96.36 E-value=0.084 Score=51.96 Aligned_cols=172 Identities=14% Similarity=0.084 Sum_probs=112.7
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhh-hhhHHHHHHHHHHHHHHHHHhhh
Q psy14075 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHR-MGRYLAALLGLLIIGICLMMIPL 277 (414)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~-~~~~~~~~~~~~~~~i~~~~~~~ 277 (414)
..-.+...++.++...+-.|+.+.++.+...+.-......-......++.++++|- .||-+++.++..+..++..++..
T Consensus 44 ~~e~~e~~a~~g~~~nlv~ylt~~~~~~~~~aa~~v~~f~G~~~~~~l~g~~laD~f~gry~tI~~~s~i~~~G~~~lt~ 123 (571)
T KOG1237|consen 44 GNEVLERLAFFGLVSNLVTYLTLELHASGGGAANNVNAFGGTQFLLPLLGAFLADSFLGRYFTINIGSLISLLGLFGLTL 123 (571)
T ss_pred HHHHHHHHhHhcchhHHHHHHHHHhccchHHHHHHHHHHhhHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444556666666778888888889888666666666666677777889999996 47878888887777777655543
Q ss_pred hhhh-------------------------HHHHHHHHHHHHHHHhhhhhhhhhhhhhhh-cccccc--hhhHHhHHHHHH
Q psy14075 278 ARNI-------------------------NHLIVPNAGLGFAIGMVDSSMMPELGYLVD-IRHTAV--YGSVYAIGDVAF 329 (414)
Q Consensus 278 ~~~~-------------------------~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~-~~~~~~--~g~~~g~~~~~~ 329 (414)
.... ..+.....+..+|.|..-+...+.-+.-.| ..|.+. ...-+.......
T Consensus 124 ~a~~~~l~p~~~~~~~~~~~c~~~s~~q~~~~~~~l~lia~G~gg~r~~~~~fGadQfd~~~~~~~~~~~~fFnW~yf~~ 203 (571)
T KOG1237|consen 124 SAMIPALLPFMCKFKPGGNVCESPSKLQLAVLYGALYLIALGAGGIRPCLLAFGADQFDELDPVEVKGIPSFFNWFYFSQ 203 (571)
T ss_pred HHHhhhcCCccccCCCCCCcccCcchHHHHHHHHHHHHheeccCCCCCcchhhcccccCccCcchhhCcccchhHHHHHH
Confidence 2111 122233333344555544433333222222 112222 236677778888
Q ss_pred HHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHHHHHHh
Q psy14075 330 CLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 330 ~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~~ 370 (414)
+.|..+...+.-++.|+.||...|.+..++.+++.++.+..
T Consensus 204 ~~g~l~a~t~~vyiq~~~~w~lgf~i~~~~~~lai~iF~~g 244 (571)
T KOG1237|consen 204 NGGALLAQTVLVYIQDNVGWKLGFGIPTVLNALAILIFLPG 244 (571)
T ss_pred HHHHHHHHHHHHhhhhcccceeeccHHHHHHHHHHHHHHcC
Confidence 99999999999898899999999988888888877766543
No 287
>KOG1479|consensus
Probab=96.21 E-value=1 Score=41.85 Aligned_cols=134 Identities=16% Similarity=0.087 Sum_probs=63.1
Q ss_pred HHHHhhhhchHHHHHHHhCCC---ccchhhHhHH-HHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh------
Q psy14075 206 TGIAMLEPSLPIWMMDTMGAD---KWQQGVSFLP-ASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI------ 275 (414)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~g~~---~~~~g~~~~~-~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~------ 275 (414)
..+.......|-+..+..+-. ....-+.... +++...+|.+...+..++-+|+.......=...+-++.+
T Consensus 257 lvy~VTLsiFPg~~~~~~~~~~~~~~y~~~~~~l~fN~~d~vG~~~a~~~~~~~~r~l~i~v~lR~lfiPlF~~cn~~~~ 336 (406)
T KOG1479|consen 257 LVYFVTLSIFPGFCSEVKSSGLLGDWYALLLVFLSFNVFDLIGSILAALLTWPDPRKLTIPVLLRLLFIPLFLLCNYPPL 336 (406)
T ss_pred eeeeeeeEecchhhcccccCcccchhhHHHHHHHHhHHHHHhhhhhhhcccCCCCceehHHHHHHHHHHHHHHHhccCCC
Confidence 344455556777776643222 2223334444 677788887666665554333222222111222222221
Q ss_pred -hhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHH
Q psy14075 276 -PLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTL 343 (414)
Q Consensus 276 -~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l 343 (414)
....+.+.......++|+..|-....... +..+..|++++ .+.|....+...++.....+.+++
T Consensus 337 ~v~~~~~~~~~~l~~~lglsnGYltsl~m~---~aPk~v~~~e~-e~aG~~m~~fl~~Gl~~G~~~s~l 401 (406)
T KOG1479|consen 337 PVVFESDGWFIFLMSLLGLSNGYLTSLIMM---YAPKQVKPSEK-EAAGNLMVFFLVGGLALGSLLSWV 401 (406)
T ss_pred CceecCchHHHHHHHHHHhccchHhhheeh---hcCCCCChHHH-HHHHHHHHHHHHHHHHHhhHHHHH
Confidence 12345566677777888877765433222 23344455543 344444444434333333333444
No 288
>KOG3097|consensus
Probab=95.74 E-value=0.16 Score=45.41 Aligned_cols=227 Identities=16% Similarity=0.102 Sum_probs=124.5
Q ss_pred HHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCC-cch
Q psy14075 39 KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPD-DRE 117 (414)
Q Consensus 39 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~-~~~ 117 (414)
..+....+..+.+.+..++|.|+++.++...+...... =+-+.+..++-.-...|++.+..+..--+++++.-.. .++
T Consensus 67 ~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~lyiA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g~~ya~~ 145 (390)
T KOG3097|consen 67 LYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALYIAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMGQNYANQ 145 (390)
T ss_pred hhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHh-hcchhHHhhccHHHhhccccccccccCcceecHHHHHHHHh
Confidence 34555667777779999999999999988877755333 2456788888899999999999988777776655321 123
Q ss_pred h---------hHHHHHHHHHHhhhhhhchhhhhHhhh----h--------c----C------------------------
Q psy14075 118 R---------GNAMGIALGGLALGVLIGPPFGGIMYQ----F--------V----G------------------------ 148 (414)
Q Consensus 118 r---------~~~~~~~~~~~~~g~~ig~~l~~~l~~----~--------~----g------------------------ 148 (414)
| .+-.+.+.+.+..+..+|..++..+.. . + |
T Consensus 146 ~~~q~~~~~~~~ffg~Ffii~~~~qv~gn~issli~~~~~~~~~~~sn~t~~~~CG~~f~~~g~~a~~nlt~p~~~~~lv 225 (390)
T KOG3097|consen 146 RGEQAGDGMKVRFFGEFFIIFQCAQVWGNLISSLIMTLFLHGALSGSNLTFSVECGANFCGSGDKAEGNLTLPPSYVILV 225 (390)
T ss_pred hhhhccCceeeeehhHHHHHHHHHHHHHHHHHHHHHHHHhhccccCccceeeeecccccCCccccccCCccCCCCCceEE
Confidence 4 344556655555555555444433221 1 0 0
Q ss_pred ChhHHHHHHHHHHHHHHHHHH-hccCC-CCCCCCCCch----hhhhccChHHHHHHHHHHHHHHHHHhh-hhchHHHHHH
Q psy14075 149 KTAPFLILSALALGDGLLQLL-LLQPG-VVKQEVEPPT----LKSLVMDPYILIAAGAITFANTGIAML-EPSLPIWMMD 221 (414)
Q Consensus 149 w~~~f~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 221 (414)
-..+|+-..++.........- ..++. ++-.+..... .-+.++++++...+-...+...-.... ..+.-.|..-
T Consensus 226 ls~i~L~c~via~~~~~~~~~~l~r~~~~r~~~~~~l~i~~l~~~~l~~~r~~llvP~tif~GleqaF~~~~fTk~~V~c 305 (390)
T KOG3097|consen 226 LSLIFLPCMVIAVLIMLFFLGALKRYGEKRLASVSGLNIFQLTFKHLRDIRLRLLVPLTIFSGLEQAFLCADFTKAYVAC 305 (390)
T ss_pred eeHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcccccchHHHHHHHhcCcceeeeehhhhhhHHHHHHHHhhhhhhhhhh
Confidence 011233332222211111110 11111 1111111110 112345666544333222222221111 1122222222
Q ss_pred HhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHH
Q psy14075 222 TMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLII 268 (414)
Q Consensus 222 ~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~ 268 (414)
+..-...+..+..+++...+.+.+.|.+.++++|......+.+.-
T Consensus 306 --~~Gv~~igf~m~cfgv~~Av~S~~~g~L~~~~gr~~~~v~gavv~ 350 (390)
T KOG3097|consen 306 --ALGVSRIGFAMACFGVGDAVASSLFGLLGKWIGRPPLLVLGAVVH 350 (390)
T ss_pred --hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHH
Confidence 233447889999999999999999999999999988776665443
No 289
>KOG4332|consensus
Probab=95.69 E-value=0.073 Score=46.11 Aligned_cols=144 Identities=16% Similarity=0.095 Sum_probs=83.7
Q ss_pred HHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q psy14075 217 IWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIG 296 (414)
Q Consensus 217 ~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~ 296 (414)
+|+.+++|+...++|.++.......++...+.|-++||.|||+..+.-.+...++++. -.++++..+.+.-.+-|+...
T Consensus 61 YyLYstYgFgkG~IgqLfiaGfgSsmLFGtivgSLaDkqGRKracvtycitYiLsCiT-KhSpqYkVLmVGR~LGGiaTs 139 (454)
T KOG4332|consen 61 YYLYSTYGFGKGDIGQLFIAGFGSSMLFGTIVGSLADKQGRKRACVTYCITYILSCIT-KHSPQYKVLMVGRVLGGIATS 139 (454)
T ss_pred eeeehhcCccCCccceeeecccchHHHHHHHHHHHHhhhccccceeeehHHHHHHHHh-hcCCceEEEeehhhhhhHHHH
Confidence 3455668888889998887766666777778889999999998765544444443321 233445555666777777777
Q ss_pred hhhhhhhhhhhhhhhcc-----cccchhhHHhHHH-HHHHHHHhHHHHHHHHHHhhhc--hHHHHHHHHHHHHHH
Q psy14075 297 MVDSSMMPELGYLVDIR-----HTAVYGSVYAIGD-VAFCLGFAIGPAMSGTLVNTIG--FEWMLFIIAILDFMY 363 (414)
Q Consensus 297 ~~~~~~~~~~~~~~~~~-----~~~~~g~~~g~~~-~~~~~g~~ig~~~~g~l~~~~g--~~~~~~~~~~~~~~~ 363 (414)
..++.+-+.. +.|.. +++-....++-.. ....+-.++....+..+.|.++ .-..|-..+.+..++
T Consensus 140 LLFSaFEsWl--iaEHnekr~FeqqWls~TFskA~ffgNglvAiiaGlfgn~lvd~~slGPVAPFdAAacfLaig 212 (454)
T KOG4332|consen 140 LLFSAFESWL--IAEHNEKRGFEQQWLSVTFSKAVFFGNGLVAIIAGLFGNLLVDTFSLGPVAPFDAAACFLAIG 212 (454)
T ss_pred HHHHHHHHHH--HHHhhhccCChHhhhhHHHHHHHHhhccHHHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHH
Confidence 7766666553 34432 2222222222222 2233445555555566677655 444454444444443
No 290
>KOG2601|consensus
Probab=95.23 E-value=0.2 Score=45.63 Aligned_cols=125 Identities=17% Similarity=0.128 Sum_probs=74.1
Q ss_pred HHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHH------hh-h-----hHHHHHHHHHHHhhhhhhhhhh-
Q psy14075 37 GSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFA------FG-R-----TYGVLFLARSLQGIGSSCSSVS- 103 (414)
Q Consensus 37 s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~------~~-~-----~~~~l~~~r~l~G~~~~~~~~~- 103 (414)
..-.....+..++.|...|+..|+|++...+++--++.++++ +. + ++..+..+.++.-...+.....
T Consensus 70 lvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~vagglvi~~l~~~~~~~~t~pv~t~~lvLa~~i~aI~~Las 149 (503)
T KOG2601|consen 70 LVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIVAGGLVITLLVHKDLKSATSPVFTVCLVLANLIAAIAVLAS 149 (503)
T ss_pred HHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHHHHHHHhhheeecchhcccccHHHHHHHHHHHHHHHHHHHH
Confidence 334455677888899999999999998887766554444433 21 2 4445544444433322221111
Q ss_pred ---HHHHHhhcC----CCcchhhHH---HHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHH
Q psy14075 104 ---GMGMLAERY----PDDRERGNA---MGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALG 162 (414)
Q Consensus 104 ---~~~~i~~~~----~~~~~r~~~---~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~ 162 (414)
...+-.||. . .+.+... ++.....-...-.+.|.+.|.+.+..+-|..-.+.++-.++
T Consensus 150 ~A~~i~i~RDWvvV~s~-g~s~s~lt~mnatir~iDq~tn~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 150 LAGTILIERDWVVVMSE-GESPSVLTNMNATIRGIDQSTNLLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred hhheEEecccEEEEecC-CCCHHHHhhcchhhhhhhhhhhchhhhhhcccceeechhhhhhhhHHHHHH
Confidence 111223333 2 1334443 46666667777889999999999888888765555555555
No 291
>KOG3098|consensus
Probab=94.99 E-value=0.55 Score=44.71 Aligned_cols=101 Identities=17% Similarity=0.295 Sum_probs=77.1
Q ss_pred HHHHHHHhhhHHHHhhc---ccCCchhHHHHHHHHHHHHHHHHhh------------------hhHHHHHHHHHHHhhhh
Q psy14075 39 KAFVQLLANPLVGILTH---RVGYSLPMFTGFVIMFLSTLIFAFG------------------RTYGVLFLARSLQGIGS 97 (414)
Q Consensus 39 ~~~~~~~~~~~~G~l~d---r~Grr~~l~~~~~~~~~~~~~~~~~------------------~~~~~l~~~r~l~G~~~ 97 (414)
..++..++..+.+.+.+ |+||++.+.++.++..++.++.-.. +++...++.-++.|++-
T Consensus 288 ~g~g~v~~g~~~~~l~~rir~fg~~~~~~~~~~~~~~~~~li~l~~p~dap~~~t~~~~~~~~~~~~~~~ii~~l~G~~D 367 (461)
T KOG3098|consen 288 IGLGEVIGGLDFSILSKRIRGFGRKPTVLIGIIIHLIGFLLIHLSFPNDAPLRPTDSPPLLFTPSYYLALIIGFLLGFGD 367 (461)
T ss_pred HhHHHHHHHHHHHHHhhhhhhcccCcchhHHHHHHHHHHHHHhccccccCCCCCCcccccccccchhHHHHHHHHHhhHH
Confidence 33445555555666664 5899999999998888888776542 14557777889999999
Q ss_pred hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhh
Q psy14075 98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGG 141 (414)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~ 141 (414)
+......+.++++.+| ++|..+.++.-.-..++..++-....
T Consensus 368 ~~~~t~~~~ii~~~~~--~~~~~~fsi~kfyq~~~s~v~~f~~~ 409 (461)
T KOG3098|consen 368 ACFNTQRYVIIALLYP--DDRAQAFSLFKFYQSVASCVAFFFSP 409 (461)
T ss_pred HHHHHHHHHHHHHHhc--CchHHHHHHHHHHHHHHHHHHhhhhh
Confidence 9999999999999995 68999999988888888776655443
No 292
>TIGR00939 2a57 Equilibrative Nucleoside Transporter (ENT).
Probab=94.77 E-value=1.5 Score=41.99 Aligned_cols=29 Identities=7% Similarity=0.174 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHhhhhhhhhhhhhhhhccccc
Q psy14075 284 LIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTA 316 (414)
Q Consensus 284 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 316 (414)
.....++.|++.+..+..... ....+|++
T Consensus 109 ~~~~v~~~g~~~~~~q~s~~g----la~~fp~~ 137 (437)
T TIGR00939 109 TMASVVIINSGMALLQGSLFG----LAGVFPST 137 (437)
T ss_pred HHHHHHHHHhhhhhhcccchh----hcccCCHH
Confidence 344455556666655544443 33455643
No 293
>KOG1479|consensus
Probab=94.73 E-value=3.4 Score=38.58 Aligned_cols=58 Identities=14% Similarity=-0.076 Sum_probs=29.5
Q ss_pred HHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhh
Q psy14075 193 YILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLG 252 (414)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~ 252 (414)
.++..++...-....++.+.+--+.|.++..+.++ .-.+...+.+...+...+...+-
T Consensus 19 v~~i~~llGiG~LlpWN~fiTa~~y~~~~~~~~~~--~~~F~~~~~~~a~i~~ll~~~~n 76 (406)
T KOG1479|consen 19 VYLIFLLLGIGTLLPWNMFITASDYYYYRFPGYHN--SKNFTSSYTLAAQIPLLLFNLLN 76 (406)
T ss_pred HHHHHHHHhcccccchHhhhccHHHHHhhcCCCch--HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444444456667777777766665444443 33444444444444444444433
No 294
>KOG2601|consensus
Probab=94.23 E-value=1.1 Score=41.05 Aligned_cols=167 Identities=16% Similarity=0.049 Sum_probs=80.5
Q ss_pred HHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH----
Q psy14075 195 LIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI---- 270 (414)
Q Consensus 195 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i---- 270 (414)
+.+...++....+-=+...-...|+.+..|-|-......-..-+....+-..+.|...|+..|+|++...+.+.=+
T Consensus 30 i~Ly~gy~lt~wgdR~W~F~VsL~M~~L~gnsl~lvAvyglvesgs~lvlg~ivGq~vDg~sr~Kvi~~~L~lqNlSv~v 109 (503)
T KOG2601|consen 30 IFLYLGYFLTTWGDRMWEFSVSLFMILLGGNSLLLVAVYGLVESGSQLVLGPIVGQWVDGMSRVKVIQTWLLLQNLSVIV 109 (503)
T ss_pred ehhhHHHHHhHhhHhHHHHHHHHHHHHHcCceehhHHHHHHHHHhHHHhhHHHHHHHhcchhHHHHHHHHHhhccHHHHH
Confidence 3344444444444444444455666664443333333333334445555556677888999998876654433222
Q ss_pred --HHHHhhhhh------hhHHHHHHHHHHHHHHHhhhhhhhhhhhhh---------hhcccccchhhHHhHHHHHHHHHH
Q psy14075 271 --CLMMIPLAR------NINHLIVPNAGLGFAIGMVDSSMMPELGYL---------VDIRHTAVYGSVYAIGDVAFCLGF 333 (414)
Q Consensus 271 --~~~~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~---------~~~~~~~~~g~~~g~~~~~~~~g~ 333 (414)
+++...+.+ +.+ +...+.++....+...-.....-... .+..+++.....++.....-..-.
T Consensus 110 agglvi~~l~~~~~~~~t~p-v~t~~lvLa~~i~aI~~Las~A~~i~i~RDWvvV~s~g~s~s~lt~mnatir~iDq~tn 188 (503)
T KOG2601|consen 110 AGGLVITLLVHKDLKSATSP-VFTVCLVLANLIAAIAVLASLAGTILIERDWVVVMSEGESPSVLTNMNATIRGIDQSTN 188 (503)
T ss_pred HHHHHhhheeecchhccccc-HHHHHHHHHHHHHHHHHHHHhhheEEecccEEEEecCCCCHHHHhhcchhhhhhhhhhh
Confidence 222222221 222 22222222222222211111100011 122333333444466666667778
Q ss_pred hHHHHHHHHHHhhhchHHHHHHHHHHHHH
Q psy14075 334 AIGPAMSGTLVNTIGFEWMLFIIAILDFM 362 (414)
Q Consensus 334 ~ig~~~~g~l~~~~g~~~~~~~~~~~~~~ 362 (414)
.+.|.+.|.+....+.+..-...++-..+
T Consensus 189 ~Lapv~tg~Iitfvsl~~~~g~f~~w~~v 217 (503)
T KOG2601|consen 189 LLAPVITGLIITFVSLRASAGTFAAWALV 217 (503)
T ss_pred chhhhhhcccceeechhhhhhhhHHHHHH
Confidence 89999999998877766544444444433
No 295
>KOG3574|consensus
Probab=93.37 E-value=1.5 Score=40.35 Aligned_cols=81 Identities=14% Similarity=0.239 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhh-----hhhhHHHHHH-HH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGH-----RMGRYLAALL-GL 265 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d-----~~~~~~~~~~-~~ 265 (414)
+.+..+.+.+..+........ .+|..++. .|.|-.+.+.+...+.=-. -.++...++| |+||||..++ +.
T Consensus 31 ~~illLl~LYllQGiP~GL~~-~iP~lL~a-k~vSyt~~a~fS~ay~P~s--LKllWaPiVDs~y~k~~GrrksWvvp~q 106 (510)
T KOG3574|consen 31 SSILLLLFLYLLQGIPLGLIG-AIPLLLQA-KGVSYTSQAIFSFAYWPFS--LKLLWAPIVDSVYSKRFGRRKSWVVPCQ 106 (510)
T ss_pred hhHHHHHHHHHHcCCchhHhh-hhHHHhcC-CCcchhhhhhhhhhhhHHH--HHHHHHhhhHHHHHHhhccccceeeehH
Confidence 355566666677766665555 88988875 4777666554433322111 2456667777 9998876443 44
Q ss_pred HHHHHHHHHhh
Q psy14075 266 LIIGICLMMIP 276 (414)
Q Consensus 266 ~~~~i~~~~~~ 276 (414)
.+.+..+..+.
T Consensus 107 ~llG~~mllLs 117 (510)
T KOG3574|consen 107 YLLGLFMLLLS 117 (510)
T ss_pred HHHHHHHHHHh
Confidence 44444444443
No 296
>PF13000 Acatn: Acetyl-coenzyme A transporter 1; InterPro: IPR024371 Acetyl-coenzyme A transporter 1 (also known as acatn) is a multipass transmembrane protein that appears to promote 9-O-acetylation in gangliosides [, ]. This entry represents acatn and its homologues.; GO: 0008521 acetyl-CoA transporter activity, 0016021 integral to membrane
Probab=92.01 E-value=1.1 Score=42.65 Aligned_cols=68 Identities=16% Similarity=0.166 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHhhhhchHHHHHH-HhCCCccchhhHhH---HHHHHHHhhhhhhhhhhhhhhhHHHHHH
Q psy14075 196 IAAGAITFANTGIAMLEPSLPIWMMD-TMGADKWQQGVSFL---PASISYLIGTNLFGPLGHRMGRYLAALL 263 (414)
Q Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~g~~~~---~~~~~~~~~~~~~g~l~d~~~~~~~~~~ 263 (414)
++.+.++++.........-.|..+++ ..+.|-.+.+.+.. ++++=-.=+.++=....+|+||||..++
T Consensus 4 lL~~LY~lQGiP~GL~~gsiPflL~~~~~~~sy~q~~~fSla~~PfSlKlLWaPiVDs~y~~~~GRRKSWii 75 (544)
T PF13000_consen 4 LLVLLYFLQGIPLGLAFGSIPFLLQSMAKKVSYSQQAIFSLASYPFSLKLLWAPIVDSVYSKRIGRRKSWII 75 (544)
T ss_pred HHHHHHHHcCcccccccccchhhhccccCCCChhHheeeeeeechhHHHHhhhhhhhhhcccccCCcchhhh
Confidence 45556666666665555678888877 12455555554332 2333223333344445568898876554
No 297
>TIGR03644 marine_trans_1 probable ammonium transporter, marine subtype. Members of this protein family are well conserved subclass of putative ammonimum transporters, belonging to the much broader set of ammonium/methylammonium transporter described by TIGR00836. Species with this transporter tend to be marine bacteria. Partial phylogenetic profiling (PPP) picks a member of this protein family as the single best-scoring protein vs. a reference profile for the marine environment Genome Property for a large number of different query genomes. This finding by PPP suggests that this transporter family represents an important adaptation to the marine environment.
Probab=91.94 E-value=11 Score=35.46 Aligned_cols=24 Identities=29% Similarity=0.170 Sum_probs=12.1
Q ss_pred hhhHHHHHHHHHHhhhhhhchhhh
Q psy14075 117 ERGNAMGIALGGLALGVLIGPPFG 140 (414)
Q Consensus 117 ~r~~~~~~~~~~~~~g~~ig~~l~ 140 (414)
+|.+.....-...-...++-|+++
T Consensus 123 eR~~~~~~~v~~~~~~~~vY~~~a 146 (404)
T TIGR03644 123 ERMKLWPFLLFAVVLTGFIYPIEG 146 (404)
T ss_pred hcccHHHHHHHHHHHHHHHHhhhh
Confidence 344444444444444555555554
No 298
>PF03547 Mem_trans: Membrane transport protein; InterPro: IPR004776 This entry represents a mostly uncharacterised family of membrane transport proteins found in eukaryotes, bacteria and archaea. Most characterised members of this family are the PIN components of auxin efflux systems from plants. These carriers are saturable, auxin-specific, and localized to the basal ends of auxin transport-competent cells [, ]. Plants typically posses several of these proteins, each displaying a unique tissue-specific expression pattern. They are expressed in almost all plant tissues including vascular tissues and roots, and influence many processes including the establishment of embryonic polarity, plant growth, apical hook formation in seedlings and the photo- and gravitrophic responses. These plant proteins are typically 600-700 amino acyl residues long and exhibit 8-12 transmembrane segments.; GO: 0055085 transmembrane transport, 0016021 integral to membrane
Probab=89.55 E-value=4.9 Score=37.74 Aligned_cols=14 Identities=29% Similarity=0.240 Sum_probs=6.3
Q ss_pred Hhhhhhhhhhhhhh
Q psy14075 242 LIGTNLFGPLGHRM 255 (414)
Q Consensus 242 ~~~~~~~g~l~d~~ 255 (414)
++..+..|++..|.
T Consensus 9 i~~ii~~G~~~~~~ 22 (385)
T PF03547_consen 9 IFLIILLGYLLGRF 22 (385)
T ss_pred HHHHHHHHHHHHHh
Confidence 33344445555443
No 299
>KOG3810|consensus
Probab=89.48 E-value=2.3 Score=38.68 Aligned_cols=136 Identities=14% Similarity=0.046 Sum_probs=94.4
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhcccCCch--hHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhh
Q psy14075 33 GVMFGSKAFVQLLANPLVGILTHRVGYSL--PMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAE 110 (414)
Q Consensus 33 g~~~s~~~~~~~~~~~~~G~l~dr~Grr~--~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~ 110 (414)
|..-+...+..+++.+..|.+--++.|.. .+.++.+..+...+.++-++++|..+++.++.+.-.....+.+..-+++
T Consensus 274 G~veAv~tlLGa~~~~~~g~l~i~w~r~g~~ll~~~s~~~agllf~m~~t~~Iw~~Ya~yvlfr~~y~l~itiA~~~iA~ 353 (433)
T KOG3810|consen 274 GAVEAVSTLLGAIAALAAGYLNINWNRWGDLLLAVGSAVQAGLLFIMAQTQHIWVCYAGYVLFRVIYQLTITIATFQIAR 353 (433)
T ss_pred CHHHHHHHHHHHHHHHHHHheeeccchhhHHHHHHHHHHhhhhhhhhhcccceehhhhhHHHHHhhHhhhhhHHHHHHHH
Confidence 66667778888899999999998888763 3445666666666777788999999999998888888888888888888
Q ss_pred cCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcC-----------ChhHHHHHHHHHHHHHHHHHHhcc
Q psy14075 111 RYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVG-----------KTAPFLILSALALGDGLLQLLLLQ 172 (414)
Q Consensus 111 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~g-----------w~~~f~~~~~~~~~~~~~~~~~~~ 172 (414)
... ++.-|..+|+...... ++=.++.-.+.|.-| +..-|.+.+.+.++.........+
T Consensus 354 nL~-~e~~gLvFGiNTFvAl---~lQsilT~iVvd~~g~~L~ir~Q~~~Y~~Yf~v~~~i~~~~~~~~~~~~~ 422 (433)
T KOG3810|consen 354 NLS-SELFGLVFGINTFVAL---ILQSILTLIVVDDRGLGLDIRTQFVVYSSYFIVLGVIFLIGFGIEYLMCR 422 (433)
T ss_pred hhh-hhhheeeeehHHHHHH---HHHHhheEEEEcccccCCCcceeEEEEeehHHHHHHHHHHHHHHHHHHhh
Confidence 887 4788888888765432 233333333334211 233467777777776555554443
No 300
>KOG4830|consensus
Probab=87.59 E-value=0.14 Score=44.00 Aligned_cols=155 Identities=15% Similarity=0.091 Sum_probs=73.8
Q ss_pred hhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHH-HH
Q psy14075 184 TLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLA-AL 262 (414)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~-~~ 262 (414)
+|..-+++-.+....+...+.-...+....++|.|..+.++++.....++-.+..+....-+.+..-..-.-.|++. ..
T Consensus 193 ~W~~WF~~v~~YQiAllYmLsRL~iNiSQaYlaFfviddlqm~qsakAllP~v~Yl~SF~VS~v~~eipwngkrlKayYs 272 (412)
T KOG4830|consen 193 HWTSWFGHVQFYQIALLYMLSRLYINISQAYLAFFVIDDLQMEQSAKALLPMVAYLSSFSVSMVNSEIPWNGKRLKAYYS 272 (412)
T ss_pred cchhhhhhhHHHHHHHHHHHHHHHhhhhhhheeeEEeehhhHHHHHhhhhHHHHHHhhhhHHhhcccCCcCcceeeeeee
Confidence 44455666667777777777777777778888888877777766555554444444444333332211101112222 22
Q ss_pred HHHHHHHHHHHHhhh-hhhhHH-HHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075 263 LGLLIIGICLMMIPL-ARNINH-LIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM 339 (414)
Q Consensus 263 ~~~~~~~i~~~~~~~-~~~~~~-~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~ 339 (414)
.|.+....+...+.+ .++... .+....+.|+..........+...... ....+..+...|.....-.+...+.-.+
T Consensus 273 aGgiiwifcga~ilLlpr~i~symyAisvfIGIAnAimlvtslsitavli-~~~~~~~aFv~GamSF~DKlS~GiA~~l 350 (412)
T KOG4830|consen 273 AGGIIWIFCGAVILLLPRGIKSYMYAISVFIGIANAIMLVTSLSITAVLI-NKNTESGAFVYGAMSFFDKLSNGIAYQL 350 (412)
T ss_pred cccHHHHHhhhheeecccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh-hcccCCceEEEehHHHHHhhcccHHHHH
Confidence 233333322222222 222211 233344455555544322222222122 1223344556666666666655554443
No 301
>KOG3880|consensus
Probab=85.58 E-value=3.5 Score=36.87 Aligned_cols=75 Identities=15% Similarity=0.182 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhhhhHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHh
Q psy14075 68 VIMFLSTLIFAFGRTYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIM 143 (414)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l 143 (414)
+++.+......+.+++|..++.-+.-|+-.|..++-..--+.+-.+| ++|..+++....+.++|..++..++-.+
T Consensus 327 l~ff~~~a~~~ftpsi~ivf~lI~~EGLlGGasYVNTf~~i~~e~~p-d~rEfamsavs~sDS~Gi~lA~~lalpl 401 (409)
T KOG3880|consen 327 LLFFLLQAWYWFTPSIWIVFALILFEGLLGGASYVNTFHNIHKETEP-DVREFAMSAVSISDSIGIFLAGLLALPL 401 (409)
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHhhcCchHHHHHHHHHhhcCCc-hHHHHhHhhheecchhhHHHHHHHhccc
Confidence 34455555667789999999999999988888777777667776775 8999999999999999988877765433
No 302
>TIGR00836 amt ammonium transporter. The mechanism of energy coupling, if any, to methyl-NH2 or NH3 uptake by the AmtB protein of E. coli is not entirely clear. NH4+ uniport driven by the pmf, energy independent NH3 facilitation, and NH4+/K+ antiport have been proposed as possible transport mechanisms. In Corynebacterium glutamicum and Arabidopsis thaliana, uptake via the Amt1 homologues of AmtB has been reported to be driven by the pmf.
Probab=85.12 E-value=35 Score=32.28 Aligned_cols=24 Identities=25% Similarity=0.243 Sum_probs=12.3
Q ss_pred hhhHHHHHHHHHHhhhhhhchhhh
Q psy14075 117 ERGNAMGIALGGLALGVLIGPPFG 140 (414)
Q Consensus 117 ~r~~~~~~~~~~~~~g~~ig~~l~ 140 (414)
+|.+...+.....-....+-|+++
T Consensus 116 eR~~~~~~~v~~~~~~~~vY~~~a 139 (403)
T TIGR00836 116 ERMKFSAYLLFSVLWTTLVYPPVA 139 (403)
T ss_pred hcccHHHHHHHHHHHHHHHHHhcc
Confidence 445555555555455555555553
No 303
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=82.35 E-value=34 Score=31.35 Aligned_cols=32 Identities=9% Similarity=0.136 Sum_probs=17.0
Q ss_pred HHHHHHHHHhhhchHHHHHHHHHHHHHHHHHH
Q psy14075 336 GPAMSGTLVNTIGFEWMLFIIAILDFMYAPLL 367 (414)
Q Consensus 336 g~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~ 367 (414)
-..+.+....+...++.+.+..++.+++.++.
T Consensus 272 ~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy 303 (334)
T PF06027_consen 272 YALIIDIFFFGYKFSWLYILAFALIIIGFVVY 303 (334)
T ss_pred HHHHHHHHhcCccccHHHHHHHHHHHHHhheE
Confidence 34455555555556666666555555544443
No 304
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=82.21 E-value=0.48 Score=43.01 Aligned_cols=104 Identities=17% Similarity=0.126 Sum_probs=1.6
Q ss_pred hHhHHHHHHHHhhhhhhhhhhhhh-hhHHHHHHHHHHHHHH--HHHhh-----------hhhhhHHHHHHHHHHHHHHHh
Q psy14075 232 VSFLPASISYLIGTNLFGPLGHRM-GRYLAALLGLLIIGIC--LMMIP-----------LARNINHLIVPNAGLGFAIGM 297 (414)
Q Consensus 232 ~~~~~~~~~~~~~~~~~g~l~d~~-~~~~~~~~~~~~~~i~--~~~~~-----------~~~~~~~~~~~~~~~g~~~~~ 297 (414)
..+..++++-.+|+.+..+..-+. ++|++. +..+.-.+. ++++. ..++.+...+.++++|+..|.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~-~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGy 264 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLW-ILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGY 264 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHH-HHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccch
Confidence 356678899999999877643221 233333 222221111 11111 123445556677888888887
Q ss_pred hhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHH
Q psy14075 298 VDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAM 339 (414)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~ 339 (414)
..+.... +..+..++++|..+-.++...-.+|-.+|..+
T Consensus 265 l~tl~m~---~~p~~v~~~e~e~aG~~~~~~L~~Gl~~Gs~l 303 (309)
T PF01733_consen 265 LSTLAMM---YAPKSVSPEERELAGSVMSFFLSFGLFIGSVL 303 (309)
T ss_dssp --HHHH------------------------------------
T ss_pred hhhceee---eCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7544333 33444555566666666666566666666654
No 305
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=80.61 E-value=14 Score=32.27 Aligned_cols=21 Identities=10% Similarity=0.238 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCC
Q psy14075 354 FIIAILDFMYAPLLYLLRNPP 374 (414)
Q Consensus 354 ~~~~~~~~~~~~~~~~~~~~~ 374 (414)
++..++.+++..+..+.+.+.
T Consensus 119 ~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 119 YIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred HHHHHHHHHHHHheeeecCCC
Confidence 344444455555544444433
No 306
>PRK13629 threonine/serine transporter TdcC; Provisional
Probab=78.20 E-value=65 Score=30.81 Aligned_cols=44 Identities=25% Similarity=0.350 Sum_probs=30.2
Q ss_pred cchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHH
Q psy14075 115 DRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGD 163 (414)
Q Consensus 115 ~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~ 163 (414)
+++.+...++..++.+-|.+.-|...+. +|-++..+..+++...
T Consensus 19 ~~d~~W~l~l~GTAIGAGmLfLPI~~g~-----~Gf~p~lillll~~p~ 62 (443)
T PRK13629 19 KSDTTWTLGLFGTAIGAGVLFFPIRAGF-----GGLIPILLMLVLAYPI 62 (443)
T ss_pred cccchHHHHHHHHHHhHHHHHHHHHHhc-----chHHHHHHHHHHHHHH
Confidence 4677888899999988888888877653 4555555555544443
No 307
>PF05255 UPF0220: Uncharacterised protein family (UPF0220); InterPro: IPR007919 This family of proteins is functionally uncharacterised.
Probab=75.61 E-value=16 Score=29.50 Aligned_cols=135 Identities=10% Similarity=0.002 Sum_probs=63.7
Q ss_pred cCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhc------CChhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCch
Q psy14075 111 RYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFV------GKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPT 184 (414)
Q Consensus 111 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~------gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (414)
.++ .+++.+..+.+.++.-.+...--.+=+.+.... .+...+++.++++.+..++.-...++.-........+
T Consensus 14 ~~~-~~~~~~~~~~~~AGaLF~~gwWi~iDa~v~s~~~~~~~~~~~f~~~ipgI~stlgm~mvN~V~~~~l~~~~~~~~~ 92 (166)
T PF05255_consen 14 WFD-WSEKRNAIGSYVAGALFALGWWIFIDAAVYSKHANGSDVHVTFVDWIPGIFSTLGMFMVNSVSKSRLRGDSYSESG 92 (166)
T ss_pred CCC-chHhHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCCccccceeeehHHHHHHHHHHhccccHHHhcCCCCCCCC
Confidence 344 255666666666655555444444444444332 4778889999988887777665544332222221112
Q ss_pred hhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhh
Q psy14075 185 LKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNL 247 (414)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~ 247 (414)
-....|.|..+.+.+...+.... .......-.|.....+.+....|....+..+..+++.++
T Consensus 93 ~~~~~~aR~~LFigf~l~fggl~-~s~~vli~~yv~~~~~~~~~~~Gva~vlqN~lI~~Sslv 154 (166)
T PF05255_consen 93 CGGAWRARLWLFIGFALSFGGLA-GSVWVLILKYVVPQYTKPTLWPGVANVLQNALIFLSSLV 154 (166)
T ss_pred CchhHHHHHHHHHHHHHHHHHHH-HHHHHhhcccccCCCCCCCcccccHHHHHHHHHHHHHHH
Confidence 22233333333222222222222 222222333333322334445565555555555555443
No 308
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=75.07 E-value=50 Score=27.87 Aligned_cols=42 Identities=19% Similarity=0.359 Sum_probs=25.4
Q ss_pred chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHH
Q psy14075 116 RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSA 158 (414)
Q Consensus 116 ~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~ 158 (414)
|++.+.-.......-++..+|..+++.+.+..+.+ ..++.++
T Consensus 158 ~~~~~~~~~~~~~~i~~f~~Ga~~ga~l~~~~~~~-al~~~~~ 199 (209)
T PF06912_consen 158 KDRALRRALRYLLIILSFFIGAILGALLYRRLGFW-ALLLPAL 199 (209)
T ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhH-HHHHHHH
Confidence 33334445556666667777777888888877754 3343333
No 309
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=74.79 E-value=71 Score=29.50 Aligned_cols=141 Identities=16% Similarity=0.035 Sum_probs=69.4
Q ss_pred HHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHH----HHHHHH---HHHH
Q psy14075 199 GAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAA----LLGLLI---IGIC 271 (414)
Q Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~----~~~~~~---~~i~ 271 (414)
++.+++..+.......+......-.|-+..+.+.+.+.+-.+.-+|+.+.-++.|.--.-+.+ ..+++. ..+.
T Consensus 14 laVf~~aa~GlvyElal~tLatyLlG~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~l 93 (508)
T COG4262 14 LAVFVCAACGLVYELALGTLATYLLGGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAAL 93 (508)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHHhcCCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHH
Confidence 333333333333333333444444677777777777777777777777766666543222111 112211 1111
Q ss_pred HHHhhh--hhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHH
Q psy14075 272 LMMIPL--ARNINHLIVPNAGLGFAIGMVDSSMMPELGYLVDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLV 344 (414)
Q Consensus 272 ~~~~~~--~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~ 344 (414)
++.+.. .++.+.++......|.-.|+-.|..+.+.+. ..... ....+.....-++|...+.....++.
T Consensus 94 y~~FA~~~~~~~~Vly~lt~vIG~LVG~EiPL~mrml~~--r~a~~---k~~~s~vl~~DYLGal~~gLl~p~ll 163 (508)
T COG4262 94 YLLFALESAPSRLVLYALTAVIGVLVGAEIPLLMRMLQR--RQAKA---KDLGSRVLTLDYLGALAGGLLWPFLL 163 (508)
T ss_pred HHHHHhccchHHHHHHHHHHHHHHHHhcchHHHHHHHHH--HHHHH---HhhhhhhhhhHhhhhhhHHHHHHHHH
Confidence 212221 2345556667777777777776665555433 11111 11222222336777777777666554
No 310
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=70.48 E-value=52 Score=32.45 Aligned_cols=30 Identities=20% Similarity=0.236 Sum_probs=14.5
Q ss_pred CCccchhhHhHHHHHHHHhhhhhhhhhhhh
Q psy14075 225 ADKWQQGVSFLPASISYLIGTNLFGPLGHR 254 (414)
Q Consensus 225 ~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~ 254 (414)
.++..-|.+....-+..++++.++|+.+-|
T Consensus 290 ~~~~~rg~l~t~~i~~y~~~~~iaGy~S~~ 319 (521)
T PF02990_consen 290 LSPNNRGSLLTAAIILYALTSFIAGYVSAR 319 (521)
T ss_pred ccccCcchHHHHHHHHHHHHhhHHHHHHHH
Confidence 344444544444444444555555555444
No 311
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=70.02 E-value=16 Score=26.81 Aligned_cols=33 Identities=15% Similarity=0.041 Sum_probs=25.5
Q ss_pred cchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhc
Q psy14075 316 AVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIG 348 (414)
Q Consensus 316 ~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g 348 (414)
..++.+.++--..-.+++.+.....||+.|++-
T Consensus 38 s~k~~~~a~klssefIsGilVGa~iG~llD~~a 70 (116)
T COG5336 38 SIKGYAQAFKLSSEFISGILVGAGIGWLLDKFA 70 (116)
T ss_pred hhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 345677777767778888888888999999764
No 312
>COG0004 AmtB Ammonia permease [Inorganic ion transport and metabolism]
Probab=69.52 E-value=1e+02 Score=29.03 Aligned_cols=24 Identities=25% Similarity=0.264 Sum_probs=13.3
Q ss_pred hhhHHHHHHHHHHhhhhhhchhhh
Q psy14075 117 ERGNAMGIALGGLALGVLIGPPFG 140 (414)
Q Consensus 117 ~r~~~~~~~~~~~~~g~~ig~~l~ 140 (414)
||.|.....-...-...++-++++
T Consensus 119 ER~kf~a~lvf~~lw~~~vY~p~a 142 (409)
T COG0004 119 ERMKFSAYLLFSVLWSTLVYPPVA 142 (409)
T ss_pred hhhhhHHHHHHHHHHHHHHhhhhh
Confidence 455555555555555555555554
No 313
>PF14851 FAM176: FAM176 family
Probab=68.72 E-value=17 Score=28.90 Aligned_cols=17 Identities=12% Similarity=0.235 Sum_probs=7.4
Q ss_pred HHHHHHHHHHHHHHHHH
Q psy14075 352 MLFIIAILDFMYAPLLY 368 (414)
Q Consensus 352 ~~~~~~~~~~~~~~~~~ 368 (414)
.|.++++++.+.+.+++
T Consensus 24 LYFv~gVC~GLlLtLcl 40 (153)
T PF14851_consen 24 LYFVSGVCAGLLLTLCL 40 (153)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34444444444443333
No 314
>PF03596 Cad: Cadmium resistance transporter; InterPro: IPR004676 These proteins are members of the Cadmium Resistance (CadD) Family. To date, this family of proteins has only been found in Gram-positive bacteria. The CadD family includes two close orthologues in two Staphylococcus species that have been reported to function in cadmium resistance, and another staphylococcal protein that has been reported to possibly function in quaternary ammonium ion export.
Probab=68.58 E-value=40 Score=28.01 Aligned_cols=33 Identities=15% Similarity=0.197 Sum_probs=16.8
Q ss_pred hhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHH
Q psy14075 137 PPFGGIMYQFVGKTAPFLILSALALGDGLLQLL 169 (414)
Q Consensus 137 ~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~ 169 (414)
+.+++.......-.|.....+.+.+...+-.++
T Consensus 43 Sl~~~~~l~~ip~~wiLGlLGliPI~lGi~~l~ 75 (191)
T PF03596_consen 43 SLLGAFGLLFIPPEWILGLLGLIPIYLGIKALF 75 (191)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 333444444444455555666666665554343
No 315
>COG1457 CodB Purine-cytosine permease and related proteins [Nucleotide transport and metabolism]
Probab=67.41 E-value=1.2e+02 Score=29.07 Aligned_cols=148 Identities=11% Similarity=-0.037 Sum_probs=69.6
Q ss_pred hcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhh-cCChhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCchhhhh
Q psy14075 110 ERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQF-VGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSL 188 (414)
Q Consensus 110 ~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~-~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 188 (414)
|..| +++|-..........+.-..++....|.+... .+++...+...+-.++..+.....-..-++..-++-...|..
T Consensus 12 ~~vp-~~~r~~~~~~~~vWfga~~~ias~~~G~ll~~~L~~~~si~aillG~llG~i~~A~~s~~Ga~~Glpqmi~sR~~ 90 (442)
T COG1457 12 EPVP-EESRKGWLNLFLVWFGANFTIASMVTGGLLVPGLSFGQSLLAILLGNLLGGIFMAYFSYQGARTGLPQMILSRYP 90 (442)
T ss_pred CCCC-hhhhhcchhHHHHHHHhHhHHHHHHHhccccccccHHHHHHHHHHHHHHHHHHHHHHHHhccccCCChheeeccc
Confidence 5556 46664443555555444444444444443332 566665554444444443433333221111111111222334
Q ss_pred ccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHH
Q psy14075 189 VMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLA 260 (414)
Q Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~ 260 (414)
+-.+.-++..+...+...++..++.++.-... ...+.........+.++...+-.+++-+...++.|--.
T Consensus 91 fG~~Gs~l~sll~~~~~iGW~~v~~~l~~~a~--~~~~~~~~~~~ili~g~l~~l~~ifG~r~l~~l~~~a~ 160 (442)
T COG1457 91 FGVKGSILPSLLNGITLIGWFGVNVILSGIAI--GSGTGLPVWAGILIIGVLMTLVTIFGYRALHKLERIAV 160 (442)
T ss_pred ccchhHHHHHHHHHHHHhhHHHHHHHHhcccc--ccCCCCcHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 44444455555555555666666555544321 11122234445555566666666666666666665443
No 316
>KOG3097|consensus
Probab=66.75 E-value=1.1e+02 Score=28.20 Aligned_cols=111 Identities=15% Similarity=0.070 Sum_probs=57.3
Q ss_pred hHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075 192 PYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC 271 (414)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~ 271 (414)
|+++.+...+.+.+.++.+....... .. +++..... ......-+.+.++.+.+.+++|-|+.+.++.......
T Consensus 29 knv~i~s~~fl~~f~a~~gl~nlq~~-vn--~~lg~~sl----~~~y~~l~~s~m~~~~~Ir~~g~K~tm~lav~~Y~ly 101 (390)
T KOG3097|consen 29 KNVLILSIAFLLTFTAYLGLQNLQTS-VN--YDLGTVSL----GALYLSLIDSSMFMPLLIRFLGTKWTMVLAVFPYALY 101 (390)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHH-Hh--cCcccchh----hhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 34555555555555555554333222 11 12222122 2233445556666678899999999887766655432
Q ss_pred HHHhhhhhhhHHHHHHHHHHHHHHHhhhhhhhhhhhhhh
Q psy14075 272 LMMIPLARNINHLIVPNAGLGFAIGMVDSSMMPELGYLV 310 (414)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~ 310 (414)
... -.-+.+..++......|++.+..+..-.+.++...
T Consensus 102 iA~-Nl~pr~~tlVPa~~~~G~aa~p~W~SkgtYlT~~g 139 (390)
T KOG3097|consen 102 IAA-NLEPRYETLVPAGLVLGMAAGPIWASKGTYLTPMG 139 (390)
T ss_pred HHh-hcchhHHhhccHHHhhccccccccccCcceecHHH
Confidence 211 11123344455666677777666655444443333
No 317
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=64.33 E-value=98 Score=27.54 Aligned_cols=82 Identities=16% Similarity=0.143 Sum_probs=42.7
Q ss_pred chhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhHhHHHHHHHH-hhhhhhhhhhhhhhhHHHH
Q psy14075 183 PTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVSFLPASISYL-IGTNLFGPLGHRMGRYLAA 261 (414)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~-~~~~~~g~l~d~~~~~~~~ 261 (414)
+..+++.|+|+.+..................|-|. +....++++=+-+.-+.++ +|.+ ++-||+.|-..+
T Consensus 60 ~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn------~g~~leaSLGY~InPL~~VllG~l---flkErls~~Q~i 130 (293)
T COG2962 60 RELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVN------NGHVLEASLGYFINPLVNVLLGRL---FLKERLSRLQWI 130 (293)
T ss_pred HHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecC------CCchhHHHhHHHHHHHHHHHHHHH---HHHhhccHHHHH
Confidence 45666888988776655555544444444444432 1122233332333333333 2333 356888887766
Q ss_pred HHHHHHHHHHHH
Q psy14075 262 LLGLLIIGICLM 273 (414)
Q Consensus 262 ~~~~~~~~i~~~ 273 (414)
.++....++...
T Consensus 131 AV~lA~~GV~~~ 142 (293)
T COG2962 131 AVGLAAAGVLIQ 142 (293)
T ss_pred HHHHHHHHHHHH
Confidence 666666555443
No 318
>PRK10666 ammonium transporter; Provisional
Probab=63.64 E-value=1.4e+02 Score=28.54 Aligned_cols=27 Identities=15% Similarity=-0.009 Sum_probs=16.3
Q ss_pred chhhHHHHHHHHHHhhhhhhchhhhhH
Q psy14075 116 RERGNAMGIALGGLALGVLIGPPFGGI 142 (414)
Q Consensus 116 ~~r~~~~~~~~~~~~~g~~ig~~l~~~ 142 (414)
.||.+..++.-...-...++-|+++-+
T Consensus 142 aER~~~~~~lif~~~~~~~vY~~vahW 168 (428)
T PRK10666 142 AERIRFSAVLIFVVVWLTLSYIPIAHM 168 (428)
T ss_pred hccccHHHHHHHHHHHHHHHHHHhhhh
Confidence 356666666666666666677766543
No 319
>PF01914 MarC: MarC family integral membrane protein; InterPro: IPR002771 Members of this family are integral membrane proteins that includes the antibiotic resistance protein MarC. These proteins may be transporters. ; GO: 0016021 integral to membrane
Probab=62.26 E-value=95 Score=26.14 Aligned_cols=61 Identities=10% Similarity=-0.019 Sum_probs=30.0
Q ss_pred hhcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHHHHh
Q psy14075 310 VDIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGF-EWMLFIIAILDFMYAPLLYLL 370 (414)
Q Consensus 310 ~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~~~~ 370 (414)
.+..++++|-+..--......+...+....+..+.+.+|. -.+|-+.+.+.+....+-...
T Consensus 28 t~~~~~~~r~~ia~~a~~~a~~ill~f~~~G~~iL~~fgIsl~af~IaGGiiL~~ia~~ml~ 89 (203)
T PF01914_consen 28 TKGMSPKERRRIARRASIIAFIILLIFAFFGQLILNFFGISLPAFRIAGGIILFLIALEMLF 89 (203)
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhC
Confidence 3444444433333333333334444455555666777773 356666666655544444433
No 320
>PF01733 Nucleoside_tran: Nucleoside transporter; InterPro: IPR002259 Delayed-early response (DER) gene products include growth progression factors and several unknown products of novel cDNAs. Murine and human cDNAs from one novel DER gene (DER12) have been characterised to identify its product and to examine its role in the growth response []. Both sequences encode a hydrophobic 36kDa protein that is predicted to contain 8 transmembrane (TM) domains. The protein has been localised to the nucleolus, where its concentration increases following mitogen stimulation []. Although the function of the protein is unknown, its identification as a nucleolar gene transcriptionally activated by growth factors implicates it as participating in the proliferative response []. Sequence analysis reveals the protein to share a high degree of similarity with the C-terminal portion of equilibrative nucleoside transporters. These proteins are integral membrane proteins which enable the movement of hydrophilic nucleosides and nucleoside analogs down their concentration gradients across cell membranes. ENT family members have been identified in humans, mice, fish, tunicates, slime molds, and bacteria []. ; GO: 0005337 nucleoside transmembrane transporter activity, 0006810 transport, 0016020 membrane; PDB: 1HXI_A.
Probab=61.42 E-value=3.2 Score=37.70 Aligned_cols=107 Identities=14% Similarity=0.034 Sum_probs=3.6
Q ss_pred HHHHHHHHHHHHhhhHHHHhhcc-cCCchhHHH--HHHHHHHHHHHHH----------hhhhHHHHHHHHHHHhhhhhhh
Q psy14075 34 VMFGSKAFVQLLANPLVGILTHR-VGYSLPMFT--GFVIMFLSTLIFA----------FGRTYGVLFLARSLQGIGSSCS 100 (414)
Q Consensus 34 ~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~~--~~~~~~~~~~~~~----------~~~~~~~l~~~r~l~G~~~~~~ 100 (414)
.....+.++..+|....++.-=+ -.+|++... .=+++.-..++|. +.+|-+..++.-++.|+..|-.
T Consensus 186 ~~fl~Fn~gD~iGR~l~~~~~~~~~~~~~l~~~s~~R~~fiPlf~~cn~~p~~~~~~~~~~~d~~~~i~~~l~g~TNGyl 265 (309)
T PF01733_consen 186 VLFLLFNLGDFIGRFLASWPRWPGPSPRWLWILSLLRFLFIPLFLLCNVQPRPRYLPVLFNSDAWFIILMLLFGFTNGYL 265 (309)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHhcchhcceeEecccccccHHHHHHHHHHHHHHHHHHHhhcccccCCCcccchHHHHHHHHHHHHccchh
Confidence 34667888888888877763211 124444332 1222222223331 2234466677788999999999
Q ss_pred hhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhh
Q psy14075 101 SVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGG 141 (414)
Q Consensus 101 ~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~ 141 (414)
....+.+..+..++ ++|..+-.+...+..+|..+|..++-
T Consensus 266 ~tl~m~~~p~~v~~-~e~e~aG~~~~~~L~~Gl~~Gs~ls~ 305 (309)
T PF01733_consen 266 STLAMMYAPKSVSP-EERELAGSVMSFFLSFGLFIGSVLSF 305 (309)
T ss_dssp -HHHH------------------------------------
T ss_pred hhceeeeCCCcCCH-HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999985 89999988888888888888877653
No 321
>PRK10263 DNA translocase FtsK; Provisional
Probab=61.32 E-value=2.6e+02 Score=30.92 Aligned_cols=33 Identities=18% Similarity=-0.036 Sum_probs=18.9
Q ss_pred HHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy14075 331 LGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMY 363 (414)
Q Consensus 331 ~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~ 363 (414)
.|+++|..+...+...+|.....+++.++.+++
T Consensus 142 gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIG 174 (1355)
T PRK10263 142 SGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAG 174 (1355)
T ss_pred ccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 467777777777776666544444443333333
No 322
>PF03741 TerC: Integral membrane protein TerC family; InterPro: IPR005496 A family containining a number of integral membrane proteins is named after TerC protein. TerC has been implicated in resistance to tellurium, and may be involved in efflux of tellurium ions. The tellurite-resistant Escherichia coli strain KL53 was found during testing of a group of clinical isolates for antibiotic and heavy metal ion resistance []. The determinant of the strain's tellurite resistance was located on a large conjugative plasmid, and analyses showed the genes terB, terC, terD and terE were essential for conservation of this resistance. Members of this family contain a number of conserved aspartates which may be involved in metal ion binding.; GO: 0016021 integral to membrane
Probab=59.92 E-value=99 Score=25.56 Aligned_cols=59 Identities=15% Similarity=0.090 Sum_probs=31.4
Q ss_pred hhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHH
Q psy14075 98 SCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSAL 159 (414)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~ 159 (414)
+.-+....+++.+..|+ ++|.++.-+=..+.-+--.+.-..+.++.+. |++...+.++.
T Consensus 11 s~DN~~vi~~~~~~lp~-~~r~kal~~Gi~~A~~lR~~~i~~~~~ll~~--~~~i~~igG~~ 69 (183)
T PF03741_consen 11 SIDNAFVIAMIFRKLPP-EQRRKALFWGIIGAIVLRIIFIFLASWLLSI--FPWILLIGGLF 69 (183)
T ss_pred HhhHHHHHHHHHhCCCH-HHhhhhHHHhHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHH
Confidence 34455566777888884 7777665443333223333444455666654 34444444443
No 323
>COG2119 Predicted membrane protein [Function unknown]
Probab=59.89 E-value=97 Score=25.48 Aligned_cols=34 Identities=12% Similarity=0.150 Sum_probs=24.5
Q ss_pred HHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHH
Q psy14075 237 ASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGI 270 (414)
Q Consensus 237 ~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i 270 (414)
..+++.++...+.++++|++.|.+...+.++..+
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~ 176 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLI 176 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHH
Confidence 4456667777788889999988877766555443
No 324
>COG4262 Predicted spermidine synthase with an N-terminal membrane domain [General function prediction only]
Probab=58.99 E-value=1.5e+02 Score=27.45 Aligned_cols=112 Identities=17% Similarity=0.086 Sum_probs=68.4
Q ss_pred cCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHH----HHHH---HHHHHHHHHh--hhhHHHHHHHHHHHhhh
Q psy14075 26 MGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFT----GFVI---MFLSTLIFAF--GRTYGVLFLARSLQGIG 96 (414)
Q Consensus 26 g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~----~~~~---~~~~~~~~~~--~~~~~~l~~~r~l~G~~ 96 (414)
|-+.-|.+.+.+.|..+..+++...-++.|---.-+.+.. |++. ..+..+.+++ .++-+.+++.-++.|.-
T Consensus 39 G~~Ilq~S~Iia~yl~amGlGs~~sry~~dd~~~~~Fv~vElllgligg~Sa~~ly~~FA~~~~~~~~Vly~lt~vIG~L 118 (508)
T COG4262 39 GGGILQTSLIIAGYLAAMGLGSLLSRYVLDDAALARFVDVELLLGLIGGVSAAALYLLFALESAPSRLVLYALTAVIGVL 118 (508)
T ss_pred CCceeehHHHHHHHHHHhchhhhhhccccCchHHHHHHHHHHHHHHhccchHHHHHHHHHhccchHHHHHHHHHHHHHHH
Confidence 5566788999999999999999888887775433322222 2221 1112222222 34677888888999999
Q ss_pred hhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhh
Q psy14075 97 SSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG 140 (414)
Q Consensus 97 ~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~ 140 (414)
.|...|..+.++..... +-....+.....-.+|.+.+.++-
T Consensus 119 VG~EiPL~mrml~~r~a---~~k~~~s~vl~~DYLGal~~gLl~ 159 (508)
T COG4262 119 VGAEIPLLMRMLQRRQA---KAKDLGSRVLTLDYLGALAGGLLW 159 (508)
T ss_pred HhcchHHHHHHHHHHHH---HHHhhhhhhhhhHhhhhhhHHHHH
Confidence 99999999988877332 222222222333555555555443
No 325
>PF07760 DUF1616: Protein of unknown function (DUF1616); InterPro: IPR011674 This is a group of sequences from hypothetical archaeal proteins. The region in question is approximately 330 amino acid residues long.
Probab=58.42 E-value=1.4e+02 Score=26.78 Aligned_cols=61 Identities=15% Similarity=0.259 Sum_probs=36.0
Q ss_pred HHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCC
Q psy14075 86 LFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 149 (414)
Q Consensus 86 l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw 149 (414)
--..|.+.|+-.-.. ...+++++-.||. +++-...--...+.+++.++-|++| .+.+...|
T Consensus 22 ~~~lr~~~g~~~vlf-~PGy~l~~~lfp~-~~~l~~~er~~ls~glSi~~~~~~g-~~l~~~~~ 82 (287)
T PF07760_consen 22 IPPLRVILGFPFVLF-LPGYALVAALFPR-KHDLDGIERLALSVGLSIAIVPLIG-LLLNYTPW 82 (287)
T ss_pred hhHHHHHHHHHHHHH-hccHHHHHHHccC-cCCCcHHHHHHHHHHHHHHHHHHHH-HHHHhccC
Confidence 557888888866555 4458999999983 5444333333444555555555554 44444333
No 326
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=55.79 E-value=33 Score=25.22 Aligned_cols=54 Identities=22% Similarity=0.224 Sum_probs=44.9
Q ss_pred CCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh
Q psy14075 27 GETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG 80 (414)
Q Consensus 27 ~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 80 (414)
+.++..|-+.++|.=.+.+.++.+++..|+.-+.+.=.+|..++.++.....+.
T Consensus 51 l~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 51 LQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred cCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 344677889999999999999999999999999888888888887777665443
No 327
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=54.73 E-value=2e+02 Score=29.65 Aligned_cols=61 Identities=7% Similarity=0.030 Sum_probs=28.3
Q ss_pred hcccccchhhHHhHHHHHHHHHHhHHHHHHHHHHh------------hhchHHHHHHHHHHHHHHHHHHHHhc
Q psy14075 311 DIRHTAVYGSVYAIGDVAFCLGFAIGPAMSGTLVN------------TIGFEWMLFIIAILDFMYAPLLYLLR 371 (414)
Q Consensus 311 ~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~------------~~g~~~~~~~~~~~~~~~~~~~~~~~ 371 (414)
..++.+..|...+-.+-...+=.++...+...+.| .++|..++...+.+.+..++..++.+
T Consensus 243 ~~f~~r~~Ge~~sR~~el~~Ir~flt~~~l~~iiD~~~~~i~l~vm~~ys~~L~li~l~~~~l~~l~~~~~~~ 315 (709)
T COG2274 243 SYFEKRSVGEIISRVRELEQIREFLTGSILTLIIDLLFALIFLAVMFLYSWKLTLIVLAAIPLNVLITLIFQP 315 (709)
T ss_pred HHccCCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444444555555444444444444444444443 34555555555544444444444333
No 328
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=54.40 E-value=57 Score=24.02 Aligned_cols=30 Identities=20% Similarity=0.205 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhccc-CCchh
Q psy14075 33 GVMFGSKAFVQLLANPLVGILTHRV-GYSLP 62 (414)
Q Consensus 33 g~~~s~~~~~~~~~~~~~G~l~dr~-Grr~~ 62 (414)
+.=.+.-+++..+-....||+.||| |-++.
T Consensus 45 a~klssefIsGilVGa~iG~llD~~agTsPw 75 (116)
T COG5336 45 AFKLSSEFISGILVGAGIGWLLDKFAGTSPW 75 (116)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 3344555666666677788899985 33443
No 329
>COG2836 Uncharacterized conserved protein [Function unknown]
Probab=53.76 E-value=1.4e+02 Score=25.47 Aligned_cols=45 Identities=11% Similarity=0.135 Sum_probs=32.0
Q ss_pred CCCccchhhHhHHHHHHHHhhhhhhhhhhhhhh---hHHHHHHHHHHH
Q psy14075 224 GADKWQQGVSFLPASISYLIGTNLFGPLGHRMG---RYLAALLGLLII 268 (414)
Q Consensus 224 g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~---~~~~~~~~~~~~ 268 (414)
.-|+.+-+..+..++++....-+..|..++++. ||+....+..+.
T Consensus 160 tgS~~~Gal~mlaFGlGTlP~ll~~G~~s~~~s~~~r~~~~rl~~gl~ 207 (232)
T COG2836 160 TGSAFEGALVMLAFGLGTLPNLLAMGIFSSKLSKSSRKRLNRLSGGLM 207 (232)
T ss_pred cCCHHHHHHHHHHHhhcccHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 446777888888899998888888888888754 555554444433
No 330
>TIGR00910 2A0307_GadC glutamate:gamma-aminobutyrate antiporter. Lowered cutoffs from 1000/500 to 800/300, promoted from subfamily to equivalog, and put into a Genome Property DHH 9/1/2009
Probab=53.74 E-value=1.7e+02 Score=28.73 Aligned_cols=8 Identities=13% Similarity=0.218 Sum_probs=3.8
Q ss_pred cCCchhHH
Q psy14075 57 VGYSLPMF 64 (414)
Q Consensus 57 ~Grr~~l~ 64 (414)
+|+|.-.+
T Consensus 76 ~G~~~Gf~ 83 (507)
T TIGR00910 76 LGERFGFA 83 (507)
T ss_pred cCccHHHH
Confidence 45554443
No 331
>PF03606 DcuC: C4-dicarboxylate anaerobic carrier; InterPro: IPR018385 Escherichia coli contains four different secondary carriers (DcuA, DcuB, DcuC, and DctA) for C4-dicarboxylates [, , , ] DcuA is used for aerobic growth on C4-dicarboxylates [, ], whereas the Dcu carriers (encoded by the dcuA, dcuB, and dcuC genes) are used under anaerobic conditions and form a distinct family of carriers [, , , , , ]. Each of the Dcu carriers is able to catalyze the uptake, antiport, and possibly also efflux of C4-dicarboxylates. DcuB is the major C4-dicarboxylate carrier for fumarate respiration with high fumarate-succinate exchange activity. It is synthesized only in the absence of oxygen and nitrate and in the presence of C4-dicarboxylates [, , , ]. DcuA is expressed constitutively in aerobic and anaerobic growth and can substitute for DcuB [, ]. These proteins are members of the C4-dicarboxylate Uptake C (DcuC) family. DcuC has 12 GES predicted transmembrane regions, is induced only under anaerobic conditions, and is not repressed by glucose. DcuC may therefore function as a succinate efflux system during anaerobic glucose fermentation. However, when overexpressed, it can replace either DcuA or DcuB in catalyzing fumarate-succinate exchange and fumarate uptake [, ]. DcuC shows the same transport modes as DcuA and DcuB (exchange, uptake, and presumably efflux of C4-dicarboxylates) [].; GO: 0016021 integral to membrane
Probab=53.74 E-value=59 Score=31.51 Aligned_cols=9 Identities=11% Similarity=-0.164 Sum_probs=4.5
Q ss_pred hhhhhhhhH
Q psy14075 250 PLGHRMGRY 258 (414)
Q Consensus 250 ~l~d~~~~~ 258 (414)
.+.+|+++|
T Consensus 106 ~l~k~l~~~ 114 (465)
T PF03606_consen 106 LLIKPLKGK 114 (465)
T ss_pred HHHHHhcCC
Confidence 445555543
No 332
>PRK02237 hypothetical protein; Provisional
Probab=50.90 E-value=57 Score=24.07 Aligned_cols=51 Identities=14% Similarity=0.116 Sum_probs=43.0
Q ss_pred chHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh
Q psy14075 30 KAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG 80 (414)
Q Consensus 30 ~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~ 80 (414)
+..|-+.++|.=.+.+.++.+++..|+.-+-+.=.+|..++.++..+..+.
T Consensus 56 ~~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~ 106 (109)
T PRK02237 56 AAFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYA 106 (109)
T ss_pred hhhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheec
Confidence 558889999999999999999999999999888888888877777665443
No 333
>PRK11017 codB cytosine permease; Provisional
Probab=49.22 E-value=2.4e+02 Score=26.75 Aligned_cols=143 Identities=10% Similarity=-0.004 Sum_probs=59.4
Q ss_pred cCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh-hhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCCCCCCchhhhhc
Q psy14075 111 RYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY-QFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLV 189 (414)
Q Consensus 111 ~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~-~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (414)
-.|+ +||...........+.+........+... ...+++.......+-.++..++..+.-..-++..-+.....|..+
T Consensus 3 pvp~-~~r~~~~~~~~~~~g~~~~~~~~~~g~~l~~GLs~~~ai~aiilG~~i~~~~~~l~~~~G~k~G~~~~v~sR~~F 81 (404)
T PRK11017 3 PVPQ-SARKGVLSLTMVMLGFTFFSASMWAGGTLGTGLSFVDFLLAVLIGNLLLGIYTAALGYIGAKTGLSTHLLARFSF 81 (404)
T ss_pred CCCH-HHhcchHhHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcCHHHHHHHHh
Confidence 3564 66665555544444555444444443333 335666666555554444444333322211111111111222333
Q ss_pred cChHHHHHHHHHHHHHHHHHhhhhchHHH-HHHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhh
Q psy14075 190 MDPYILIAAGAITFANTGIAMLEPSLPIW-MMDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGR 257 (414)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~ 257 (414)
-.+.-....+...+...+..+++.+.-.. +.+..|.+... ...+..+...+..+..-+..+|+.+
T Consensus 82 G~~Gs~l~~~~~~i~~igW~av~~~~~~~~l~~~~~~~~~~---~~~i~~~l~~~~~~~G~~~i~~~~~ 147 (404)
T PRK11017 82 GEKGSWLPSLLLGFTQVGWFGVGVAMFAIPVVKATGLDINL---LIVLSGLLMTVTAYFGISALTILSR 147 (404)
T ss_pred chhHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCHHH---HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33332333333334444444444443222 23334554322 2333444444444444444555543
No 334
>PF02632 BioY: BioY family; InterPro: IPR003784 BioMNY proteins are considered to constitute tripartite biotin transporters in prokaryotes. One-third of the widespread bioY genes are linked to bioMN. Many bioY genes are located at loci encoding biotin biosynthesis, while others are unlinked to biotin metabolic or transport genes. BioY is a high-capacity transporter that is converted to a high-affinity system in the presence of BioMN. BioMNY-mediated biotin uptake is severely impaired by the replacement of the Walker A lysine residue in BioM, demonstrating the dependency of high-affinity transport on a functional ATPase [].
Probab=48.91 E-value=1.1e+02 Score=24.36 Aligned_cols=42 Identities=24% Similarity=0.324 Sum_probs=27.6
Q ss_pred HHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHH
Q psy14075 36 FGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIF 77 (414)
Q Consensus 36 ~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~ 77 (414)
+.-|.+++.+.+.+.|++.+|..+++..........++...+
T Consensus 59 TgGyl~gf~~~a~i~g~~~~~~~~~~~~~~~~~~~~~g~~ii 100 (148)
T PF02632_consen 59 TGGYLLGFPLAALIIGLLAERLKRSRSFLRLILAMLVGLLII 100 (148)
T ss_pred CChHHHHHHHHHHHHHHHHHhccccchHHHHHHHHHHHHHHH
Confidence 456778888999999999999988743333333333333333
No 335
>PRK00293 dipZ thiol:disulfide interchange protein precursor; Provisional
Probab=48.45 E-value=3e+02 Score=27.62 Aligned_cols=51 Identities=12% Similarity=0.354 Sum_probs=24.5
Q ss_pred CccchhhHhHHHHHHHHhhhhhhhhhhh----hhhhH--HH-HHHHHHHHHHHHHHhh
Q psy14075 226 DKWQQGVSFLPASISYLIGTNLFGPLGH----RMGRY--LA-ALLGLLIIGICLMMIP 276 (414)
Q Consensus 226 ~~~~~g~~~~~~~~~~~~~~~~~g~l~d----~~~~~--~~-~~~~~~~~~i~~~~~~ 276 (414)
++...+..+..++++..+--++.+.... |.|+. ++ ...+.++.+.+..++.
T Consensus 323 ~~~~g~~~l~~~gLG~~~Plll~~~~~~~~lpk~g~wm~~~k~~~G~~ll~~~~~ll~ 380 (571)
T PRK00293 323 DLLLGGLTLYLLALGMGLPLILITTFGNKLLPKSGPWMNQVKTAFGFVLLALPVFLLE 380 (571)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 4445556666777776554444443333 33321 11 2445555555544443
No 336
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=47.67 E-value=2.1e+02 Score=25.57 Aligned_cols=19 Identities=37% Similarity=0.214 Sum_probs=9.0
Q ss_pred hhhHHHHHHHHHHHHHHHh
Q psy14075 279 RNINHLIVPNAGLGFAIGM 297 (414)
Q Consensus 279 ~~~~~~~~~~~~~g~~~~~ 297 (414)
++.+...+.+.+.+++.++
T Consensus 21 ~~~~l~~~~~~~~~F~~~m 39 (284)
T PF12805_consen 21 PYPWLLILVLALLTFFFGM 39 (284)
T ss_pred hccHHHHHHHHHHHHHHHH
Confidence 3444445544555544443
No 337
>PF03219 TLC: TLC ATP/ADP transporter; InterPro: IPR004667 These proteins are members of the ATP:ADP Antiporter (AAA) family, which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.; GO: 0005471 ATP:ADP antiporter activity, 0005524 ATP binding, 0006810 transport, 0016021 integral to membrane
Probab=46.79 E-value=2.9e+02 Score=27.05 Aligned_cols=49 Identities=12% Similarity=0.082 Sum_probs=34.3
Q ss_pred ccchhhHHhHHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHHHHHH
Q psy14075 315 TAVYGSVYAIGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAILDFMY 363 (414)
Q Consensus 315 ~~~~g~~~g~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~ 363 (414)
++.+...+|-.+...++...+-..+.+.+.+..||..+..+.-++.++.
T Consensus 314 ~~~ysafmG~~~~~tGivtii~~~l~~~iir~~GW~~~AlitPiv~lit 362 (491)
T PF03219_consen 314 PNDYSAFMGKFSSWTGIVTIIMMFLSSNIIRRFGWRTAALITPIVILIT 362 (491)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHhHHHHHHH
Confidence 3455667777777777777777788889999999987766654444443
No 338
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=46.26 E-value=14 Score=28.06 Aligned_cols=12 Identities=25% Similarity=0.351 Sum_probs=4.4
Q ss_pred HHHHHhcCCCch
Q psy14075 365 PLLYLLRNPPTK 376 (414)
Q Consensus 365 ~~~~~~~~~~~~ 376 (414)
++.++++|.+|+
T Consensus 83 li~y~irR~~Kk 94 (122)
T PF01102_consen 83 LISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHS--
T ss_pred HHHHHHHHHhcc
Confidence 344444444333
No 339
>KOG4255|consensus
Probab=45.15 E-value=2.5e+02 Score=25.82 Aligned_cols=25 Identities=20% Similarity=0.058 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHhhhhchHHHHHH
Q psy14075 197 AAGAITFANTGIAMLEPSLPIWMMD 221 (414)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (414)
..+..+..+.+.+....-+|...++
T Consensus 16 valfG~gswa~vn~~wv~lp~lv~e 40 (439)
T KOG4255|consen 16 VALFGMGSWAGVNGLWVELPLLVKE 40 (439)
T ss_pred HHHHccchHhhhcceeeehhHHHhh
Confidence 3344444555556666667777666
No 340
>PF00909 Ammonium_transp: Ammonium Transporter Family; InterPro: IPR024041 This ammonium transporter domain consists of a duplication of 2 structural repeats of five helices each plus one extra C-terminal helix. It has been described as a channel that spans the membrane 11 times [].; PDB: 3B9Z_A 3B9Y_A 3B9W_A 3BHS_A 2B2H_A 2B2J_A 2B2F_A 2B2I_A 2NPG_A 2NUU_E ....
Probab=44.32 E-value=2.8e+02 Score=26.22 Aligned_cols=29 Identities=24% Similarity=0.348 Sum_probs=20.9
Q ss_pred chhhHHHHHHHHHHhhhhhhchhhhhHhh
Q psy14075 116 RERGNAMGIALGGLALGVLIGPPFGGIMY 144 (414)
Q Consensus 116 ~~r~~~~~~~~~~~~~g~~ig~~l~~~l~ 144 (414)
.+|.+...+.....-++.++-|+++-+.-
T Consensus 107 aeR~~~~~~ii~~~l~~~~vy~~~~~w~w 135 (399)
T PF00909_consen 107 AERIKFSAYIIFGFLWGGLVYPPLAHWVW 135 (399)
T ss_dssp CCCCHHHHHHHHHHHCCCCTHHHHHHHHH
T ss_pred eceeeehHHHHHHHHHhhhhccccceEEE
Confidence 45778888888777788888887654443
No 341
>COG1268 BioY Uncharacterized conserved protein [General function prediction only]
Probab=44.23 E-value=94 Score=25.69 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=20.5
Q ss_pred HHHHHHHHHHhhhHHHHhhcccCC
Q psy14075 36 FGSKAFVQLLANPLVGILTHRVGY 59 (414)
Q Consensus 36 ~s~~~~~~~~~~~~~G~l~dr~Gr 59 (414)
+.-|.+++.+++.+.|++.||..+
T Consensus 88 TgGyL~gfi~aa~l~G~l~~k~~~ 111 (184)
T COG1268 88 TGGYLIGFIIAAFLIGLLAEKIRK 111 (184)
T ss_pred chhHHHHHHHHHHHHHHHHHhhhc
Confidence 356778889999999999999886
No 342
>KOG0682|consensus
Probab=43.05 E-value=3.2e+02 Score=26.48 Aligned_cols=34 Identities=21% Similarity=0.165 Sum_probs=22.8
Q ss_pred chhhHHHHHHHHHHhhhhhhchhhhhHhhhhcCC
Q psy14075 116 RERGNAMGIALGGLALGVLIGPPFGGIMYQFVGK 149 (414)
Q Consensus 116 ~~r~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw 149 (414)
.+|++.........-+-.++-++++-+.-+.-||
T Consensus 145 AER~~l~~~~v~~~~~~tlVY~~~a~W~W~~~Gw 178 (500)
T KOG0682|consen 145 AERGRLKPYMVFSFFLTTLVYCPVAHWVWSPNGW 178 (500)
T ss_pred HhhhcchhHHHHHHHHHHhcccccceeeecCCce
Confidence 4677777777777777777777777665443344
No 343
>PF07672 MFS_Mycoplasma: Mycoplasma MFS transporter; InterPro: IPR011699 These proteins share some similarity with members of the Major Facilitator Superfamily (MFS).
Probab=42.84 E-value=1.7e+02 Score=25.81 Aligned_cols=101 Identities=13% Similarity=0.029 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHhhhHHHHhhcc-cCCchhHH----HHHHHHHHHHHHHHh-h----hhHHHHHHHHHHHhhhhhhhhh
Q psy14075 33 GVMFGSKAFVQLLANPLVGILTHR-VGYSLPMF----TGFVIMFLSTLIFAF-G----RTYGVLFLARSLQGIGSSCSSV 102 (414)
Q Consensus 33 g~~~s~~~~~~~~~~~~~G~l~dr-~Grr~~l~----~~~~~~~~~~~~~~~-~----~~~~~l~~~r~l~G~~~~~~~~ 102 (414)
....-++..+..++....|.+... +.||+.+. .+++.+.++.+.... . .+...+++.-++.|++.=+..+
T Consensus 144 ~~~~I~fv~g~~~G~~~ig~~nkt~~kRk~fi~~~~~~gi~~~~l~~~~~~~~g~~~~~~~~~f~I~~Fl~G~f~WgiQ~ 223 (267)
T PF07672_consen 144 PIFQILFVAGYFLGPFTIGLWNKTNYKRKPFIHFIISLGIVFFVLSIVVVYFVGPGNAAGFAFFYIFGFLAGFFLWGIQG 223 (267)
T ss_pred HHHHHHHHHHHhhhceeeccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHhCcchHHHHHHHHHHHHHHHHHHHhhhH
Confidence 444455555666666667777664 44555544 334455555444212 1 1356677777777765433443
Q ss_pred hHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhh
Q psy14075 103 SGMGMLAERYPDDRERGNAMGIALGGLALGVLI 135 (414)
Q Consensus 103 ~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~i 135 (414)
.. -.+.+-+++ .++.+.--.++..+++|.+.
T Consensus 224 Vi-L~lPhEyK~-~~pk~ig~~Fg~iWGfGY~~ 254 (267)
T PF07672_consen 224 VI-LNLPHEYKG-YNPKKIGIQFGLIWGFGYIF 254 (267)
T ss_pred HH-hcChhhhcC-CCcceehhHHHHHHHHHHHH
Confidence 32 233444442 33334333444455555443
No 344
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=41.92 E-value=43 Score=24.62 Aligned_cols=49 Identities=14% Similarity=0.107 Sum_probs=37.3
Q ss_pred cchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhh
Q psy14075 228 WQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIP 276 (414)
Q Consensus 228 ~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~ 276 (414)
...|=.+..++-..++.+++.++..|+..+-+.=.++..++.++..++.
T Consensus 54 ~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 54 AAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred ccchhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 4567778888888999999999999998776666666666666655443
No 345
>PF04277 OAD_gamma: Oxaloacetate decarboxylase, gamma chain ; InterPro: IPR005899 This family comprises distantly related, low complexity, hydrophobic small subunits of several related sodium ion-pumping decarboxylases. These include oxaloacetate decarboxylase gamma subunit and methylmalonyl-CoA decarboxylase delta subunit [].; GO: 0008948 oxaloacetate decarboxylase activity, 0015081 sodium ion transmembrane transporter activity, 0071436 sodium ion export, 0016020 membrane
Probab=41.68 E-value=70 Score=21.94 Aligned_cols=24 Identities=17% Similarity=0.376 Sum_probs=12.1
Q ss_pred hhchHHHHHHHHHHHHHHHHHHHH
Q psy14075 346 TIGFEWMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 346 ~~g~~~~~~~~~~~~~~~~~~~~~ 369 (414)
..|...+|.++.++.++..++..+
T Consensus 9 i~Gm~iVF~~L~lL~~~i~l~~~~ 32 (79)
T PF04277_consen 9 IIGMGIVFLVLILLILVISLMSKL 32 (79)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555565555555544444444
No 346
>COG4769 Predicted membrane protein [Function unknown]
Probab=41.63 E-value=76 Score=25.48 Aligned_cols=51 Identities=20% Similarity=0.208 Sum_probs=32.9
Q ss_pred HHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHHhh
Q psy14075 39 KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQGI 95 (414)
Q Consensus 39 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~G~ 95 (414)
++...++.+...-++..++|+|.+=.+|.-. .-++.+|..++.+.+++.+-
T Consensus 82 ~sfaG~i~S~L~m~~l~~f~~k~~S~lgiS~------mGaF~hNl~QLivas~Lv~~ 132 (181)
T COG4769 82 YSFAGAILSTLFMYFLYQFGPKYLSLLGISV------MGAFTHNLGQLIVASFLVFT 132 (181)
T ss_pred HHHHHHHHHHHHHHHHHHcCCceEeeeehhh------HHHHHHhHHHHHHHHHHHhc
Confidence 4445555666667788889988874443322 23567777777777777654
No 347
>PRK10621 hypothetical protein; Provisional
Probab=41.46 E-value=2.5e+02 Score=24.74 Aligned_cols=30 Identities=23% Similarity=0.296 Sum_probs=17.6
Q ss_pred hhhhhhchhhhhHhhhhcCChhHHHHHHHH
Q psy14075 130 ALGVLIGPPFGGIMYQFVGKTAPFLILSAL 159 (414)
Q Consensus 130 ~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~ 159 (414)
.++.++|.+++.++.++.+-+..-.+.+++
T Consensus 84 ~~~~l~Ga~~G~~l~~~l~~~~l~~~~~~~ 113 (266)
T PRK10621 84 IAMTFVGSMSGALLVQYVQADILRQILPIL 113 (266)
T ss_pred HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 446667777777777666544444444443
No 348
>PRK11111 hypothetical protein; Provisional
Probab=40.99 E-value=2.3e+02 Score=24.15 Aligned_cols=37 Identities=11% Similarity=0.070 Sum_probs=21.1
Q ss_pred HhHHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHHHH
Q psy14075 333 FAIGPAMSGTLVNTIGF-EWMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 333 ~~ig~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~~~ 369 (414)
-.+..+.+.++.+.+|. -.+|-+.+.+.++...+-..
T Consensus 57 ll~f~~~G~~iL~~fGIsl~afrIaGGiiL~~ial~Ml 94 (214)
T PRK11111 57 LLISLFLGDFILNLFGISIDSFRIAGGILVVTIAMSMI 94 (214)
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHh
Confidence 33445556667777773 35666666665554444443
No 349
>PF06912 DUF1275: Protein of unknown function (DUF1275); InterPro: IPR010699 This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown although a few members are thought to be membrane proteins.
Probab=40.28 E-value=2.2e+02 Score=23.86 Aligned_cols=22 Identities=32% Similarity=0.602 Sum_probs=12.8
Q ss_pred HHHHHHhHHHHHHHHHHhhhch
Q psy14075 328 AFCLGFAIGPAMSGTLVNTIGF 349 (414)
Q Consensus 328 ~~~~g~~ig~~~~g~l~~~~g~ 349 (414)
...++-.+|..+++.+.+..+.
T Consensus 170 ~~i~~f~~Ga~~ga~l~~~~~~ 191 (209)
T PF06912_consen 170 LIILSFFIGAILGALLYRRLGF 191 (209)
T ss_pred HHHHHHHHHHHHHHHHHHHHhh
Confidence 3344555566666666666664
No 350
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=39.94 E-value=69 Score=25.48 Aligned_cols=49 Identities=18% Similarity=0.321 Sum_probs=31.2
Q ss_pred hHHHHHHHHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhh
Q psy14075 82 TYGVLFLARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVL 134 (414)
Q Consensus 82 ~~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ 134 (414)
.+..++..-++.|+|.- ...+.+++.-+++ ++.|..+|+-..-.+++-+
T Consensus 96 ~~~~~~~S~~~Fg~gll---GisYGilSaSWD~-~r~GSllG~~e~~~N~~r~ 144 (153)
T PF11947_consen 96 PWAVLLVSLVFFGLGLL---GISYGILSASWDP-EREGSLLGWEEFKRNWGRM 144 (153)
T ss_pred chHHHHHHHHHHHHHHH---hhhhhhcccccCC-CCCCCcccHHHHHHhHHHH
Confidence 44445544445454432 3345666777774 7789999998888887654
No 351
>PRK10995 inner membrane protein; Provisional
Probab=39.89 E-value=2.4e+02 Score=24.11 Aligned_cols=39 Identities=15% Similarity=-0.027 Sum_probs=23.1
Q ss_pred HHHhHHHHHHHHHHhhhc-hHHHHHHHHHHHHHHHHHHHH
Q psy14075 331 LGFAIGPAMSGTLVNTIG-FEWMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 331 ~g~~ig~~~~g~l~~~~g-~~~~~~~~~~~~~~~~~~~~~ 369 (414)
.-..+....+..+.+.+| ....|-+.+.+.++...+-..
T Consensus 53 ~ill~f~~~G~~il~~fgIs~~a~rIaGGilL~~igi~ml 92 (221)
T PRK10995 53 AIMMVAFYAGQLVMSTFGISIPGLRIAGGLIVAFIGFRML 92 (221)
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHh
Confidence 334455555666777777 445777777666655544443
No 352
>PF06679 DUF1180: Protein of unknown function (DUF1180); InterPro: IPR009565 This entry consists of several hypothetical eukaryotic proteins thought to be membrane proteins. Their function is unknown.
Probab=39.81 E-value=47 Score=26.73 Aligned_cols=13 Identities=15% Similarity=0.373 Sum_probs=5.5
Q ss_pred HHHHHHHHHHHHH
Q psy14075 350 EWMLFIIAILDFM 362 (414)
Q Consensus 350 ~~~~~~~~~~~~~ 362 (414)
+.+++++.++..+
T Consensus 95 ~R~~~Vl~g~s~l 107 (163)
T PF06679_consen 95 KRALYVLVGLSAL 107 (163)
T ss_pred hhhHHHHHHHHHH
Confidence 3444444444333
No 353
>COG4736 CcoQ Cbb3-type cytochrome oxidase, subunit 3 [Posttranslational modification, protein turnover, chaperones]
Probab=39.17 E-value=1.1e+02 Score=19.96 Aligned_cols=12 Identities=8% Similarity=0.155 Sum_probs=5.0
Q ss_pred HHHHHhcCCCch
Q psy14075 365 PLLYLLRNPPTK 376 (414)
Q Consensus 365 ~~~~~~~~~~~~ 376 (414)
++.+.+++.+|.
T Consensus 25 vi~~ayr~~~K~ 36 (60)
T COG4736 25 VIYFAYRPGKKG 36 (60)
T ss_pred HHHHHhcccchh
Confidence 344444444333
No 354
>COG0730 Predicted permeases [General function prediction only]
Probab=38.79 E-value=2.7e+02 Score=24.32 Aligned_cols=21 Identities=19% Similarity=0.373 Sum_probs=10.5
Q ss_pred HHHHHHhhhhhhhhhhhhhhh
Q psy14075 237 ASISYLIGTNLFGPLGHRMGR 257 (414)
Q Consensus 237 ~~~~~~~~~~~~g~l~d~~~~ 257 (414)
...+.++|..+..++..|.++
T Consensus 212 l~~g~~~G~~lG~~l~~~~~~ 232 (258)
T COG0730 212 LAVGSILGAYLGARLARRLSP 232 (258)
T ss_pred HHHHHHHHHHHHHHHHHhcCH
Confidence 344455555555555555543
No 355
>PF11299 DUF3100: Protein of unknown function (DUF3100); InterPro: IPR021450 Some members in this family of proteins are annotated as membrane proteins however this cannot be confirmed. Currently no function is known.
Probab=37.39 E-value=46 Score=28.44 Aligned_cols=50 Identities=22% Similarity=0.306 Sum_probs=36.5
Q ss_pred HHHHHhhhhhhhhhhHHHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhh
Q psy14075 89 ARSLQGIGSSCSSVSGMGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFG 140 (414)
Q Consensus 89 ~r~l~G~~~~~~~~~~~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~ 140 (414)
.-.-.|+|.|....++.+-+.+.+| +......++-...+.+..+.|-...
T Consensus 177 LAMasGvGSgSMMaAa~~aL~~~~P--~~a~~i~A~AaaSNllt~~~G~Y~~ 226 (241)
T PF11299_consen 177 LAMASGVGSGSMMAAASGALAAAYP--EMADQILAFAAASNLLTSVTGLYMS 226 (241)
T ss_pred HHHHcCCcHHHHHHHHHHHHHHHCc--chHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456799999999998888999997 4566677777776666666655443
No 356
>PF04226 Transgly_assoc: Transglycosylase associated protein; InterPro: IPR007341 This bacterial protein is predicted to be an integral membrane protein. Some family members have been annotated as transglycosylase-associated proteins, but no experimental evidence is provided. This family was annotated based on the information in P76011 from SWISSPROT.; GO: 0016021 integral to membrane
Probab=37.02 E-value=91 Score=19.16 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=17.3
Q ss_pred hhchhhhhHhhhhcC----ChhHHHHHHHHHHHHHHHHH
Q psy14075 134 LIGPPFGGIMYQFVG----KTAPFLILSALALGDGLLQL 168 (414)
Q Consensus 134 ~ig~~l~~~l~~~~g----w~~~f~~~~~~~~~~~~~~~ 168 (414)
++|..+++++.+.++ +.+.-++.+++..+..+..+
T Consensus 5 iiGa~vGg~l~~~lg~~~~~~~~~~i~aviGAiill~i~ 43 (48)
T PF04226_consen 5 IIGAFVGGWLFGLLGINGGGSWGSFIVAVIGAIILLFIY 43 (48)
T ss_pred hHHHHHHHHHHHHhcccCCchHHHHHHHHHHHHHHHHHH
Confidence 344455555554443 35555555555555444443
No 357
>PRK02237 hypothetical protein; Provisional
Probab=34.25 E-value=78 Score=23.38 Aligned_cols=47 Identities=15% Similarity=0.088 Sum_probs=36.1
Q ss_pred chhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075 229 QQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI 275 (414)
Q Consensus 229 ~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~ 275 (414)
..|=.+..++-..++.+++.++..|+..+-+.=.++..++.++..++
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI 103 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVI 103 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHh
Confidence 46778888888899999999999999877666566666666665444
No 358
>PF12794 MscS_TM: Mechanosensitive ion channel inner membrane domain 1
Probab=32.76 E-value=4e+02 Score=24.58 Aligned_cols=11 Identities=36% Similarity=0.513 Sum_probs=4.5
Q ss_pred ChhHHHHHHHH
Q psy14075 149 KTAPFLILSAL 159 (414)
Q Consensus 149 w~~~f~~~~~~ 159 (414)
|+.+.+....+
T Consensus 1 ~~~~~~~~~ll 11 (340)
T PF12794_consen 1 WQSPLLFLLLL 11 (340)
T ss_pred CCchHHHHHHH
Confidence 44444444333
No 359
>PF15061 DUF4538: Domain of unknown function (DUF4538)
Probab=32.61 E-value=42 Score=21.56 Aligned_cols=25 Identities=20% Similarity=0.414 Sum_probs=16.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHHhcC
Q psy14075 348 GFEWMLFIIAILDFMYAPLLYLLRN 372 (414)
Q Consensus 348 g~~~~~~~~~~~~~~~~~~~~~~~~ 372 (414)
||+.+.++.+.+.++++.+.-...+
T Consensus 4 g~r~~~~~ggfVg~iG~a~Ypi~~~ 28 (58)
T PF15061_consen 4 GWRYALFVGGFVGLIGAALYPIYFR 28 (58)
T ss_pred cccchhhHHHHHHHHHHHHhhhhcc
Confidence 5677777777777777666554433
No 360
>PF12805 FUSC-like: FUSC-like inner membrane protein yccS
Probab=31.75 E-value=3.7e+02 Score=23.92 Aligned_cols=35 Identities=14% Similarity=0.085 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHHHhh-hhHHHHHHHHHHHhhhhh
Q psy14075 64 FTGFVIMFLSTLIFAFG-RTYGVLFLARSLQGIGSS 98 (414)
Q Consensus 64 ~~~~~~~~~~~~~~~~~-~~~~~l~~~r~l~G~~~~ 98 (414)
+.+.+.+++++++..+. ++.|.+.+.-++.+++.+
T Consensus 3 ~~~~~~~~~~s~~~~l~~~~~~l~~~~~~~~~F~~~ 38 (284)
T PF12805_consen 3 IATLLCFALASLLVGLLFPYPWLLILVLALLTFFFG 38 (284)
T ss_pred HHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHH
Confidence 34555554555555543 445555555555555444
No 361
>TIGR02840 spore_YtaF putative sporulation protein YtaF. This protein family was identified, at the time of the publication of the Carboxydothermus hydrogenoformans genome, as having a phylogenetic profile that exactly matches the subset of the Firmicutes capable of forming endospores. The species include Bacillus anthracis, Clostridium tetani, Thermoanaerobacter tengcongensis, Geobacillus kaustophilus, etc. This protein, previously named YtaF, is therefore a putative sporulation protein.
Probab=31.59 E-value=3.2e+02 Score=23.07 Aligned_cols=15 Identities=33% Similarity=0.634 Sum_probs=7.5
Q ss_pred hhHHHHHHHHHHHHHH
Q psy14075 256 GRYLAALLGLLIIGIC 271 (414)
Q Consensus 256 ~~~~~~~~~~~~~~i~ 271 (414)
+++. ++-+.++..++
T Consensus 188 g~~a-~igGliLI~iG 202 (206)
T TIGR02840 188 GKFS-FLSGILLILLG 202 (206)
T ss_pred cchH-HHHHHHHHHHH
Confidence 4443 55555555544
No 362
>PF02990 EMP70: Endomembrane protein 70; InterPro: IPR004240 The transmembrane 9 superfamily protein (TM9SF) may function as a channel or small molecule transporter. Proteins in this group are endosomal integral membrane proteins.; GO: 0016021 integral to membrane
Probab=30.45 E-value=2.2e+02 Score=28.08 Aligned_cols=9 Identities=33% Similarity=0.501 Sum_probs=3.2
Q ss_pred HHHHHHHHH
Q psy14075 355 IIAILDFMY 363 (414)
Q Consensus 355 ~~~~~~~~~ 363 (414)
+.....+++
T Consensus 372 l~~lw~~v~ 380 (521)
T PF02990_consen 372 LIALWFFVS 380 (521)
T ss_pred HHHHHHHHh
Confidence 333333333
No 363
>COG3202 ATP/ADP translocase [Energy production and conversion]
Probab=30.33 E-value=5.3e+02 Score=25.25 Aligned_cols=78 Identities=12% Similarity=0.126 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhhhhhhhhhhhhhhhcccc-cchhhHHhHHHHHHHHH-HhHHHHHHHHHHhhhchHHHHHHHHHHHHHHH
Q psy14075 287 PNAGLGFAIGMVDSSMMPELGYLVDIRHT-AVYGSVYAIGDVAFCLG-FAIGPAMSGTLVNTIGFEWMLFIIAILDFMYA 364 (414)
Q Consensus 287 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g-~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~ 364 (414)
..+.+|++........-.-+ .+.+|. +.+...+|-.+...++. ..+.-..++-+....||-..-.+.-++.+++.
T Consensus 290 ~vl~Y~v~inLvE~~wKs~i---k~~~~~~~~~~~f~~~~~~~tgvv~~v~~~~~~s~~ir~~GW~~~AlitPiv~litg 366 (509)
T COG3202 290 LVLAYGVSINLVEGVWKSGI---KELYPTTNEYTAFMGRFQIWTGVVSLVVFLFPGSNLIRRVGWFTGALITPLVMLITG 366 (509)
T ss_pred HHHHHHHHHHHHHHHHHHhH---HHhcCChhHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHhhHHHHHHHHHHHHHHHH
Confidence 34444555555444333332 233332 23566667666666555 55666777888888898777666666666554
Q ss_pred HHH
Q psy14075 365 PLL 367 (414)
Q Consensus 365 ~~~ 367 (414)
++.
T Consensus 367 ~lF 369 (509)
T COG3202 367 VLF 369 (509)
T ss_pred HHH
Confidence 433
No 364
>TIGR00800 ncs1 NCS1 nucleoside transporter family. The NCS1 family consists of bacterial and yeast transporters for nucleobases including purines and pyrimidines. Members of this family possess twelve putative transmembrane a-helical spanners (TMSs). At least some of them have been shown to function in uptake by substrate:H+ symport mechanism.
Probab=30.24 E-value=5e+02 Score=24.91 Aligned_cols=59 Identities=14% Similarity=-0.022 Sum_probs=30.2
Q ss_pred hcCCCcchhh-HHHHHHHHHHhhhhhhchhhhhHhhhh--cCChhHHHHHHHHHHHHHHHHHH
Q psy14075 110 ERYPDDRERG-NAMGIALGGLALGVLIGPPFGGIMYQF--VGKTAPFLILSALALGDGLLQLL 169 (414)
Q Consensus 110 ~~~~~~~~r~-~~~~~~~~~~~~g~~ig~~l~~~l~~~--~gw~~~f~~~~~~~~~~~~~~~~ 169 (414)
|-.|+ +||. +...+.....+....+.....|...-. .+++...+...+-.++..++...
T Consensus 5 ~pvp~-~~R~~~~~~~~~~W~~~~~~v~~~~~Ga~l~~~GLs~~~ailai~lG~~i~~~~~~l 66 (442)
T TIGR00800 5 QPVKE-EERTWSFLNYFSLWLGAAFNIATWAIGALGLPLGLSWWQSVIAIILGNLLGGIFVAL 66 (442)
T ss_pred CCCCc-ccCCccHHHHHHHHHHHhhhHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 34564 5665 666665555555544444444433222 56666666555555554444443
No 365
>KOG4112|consensus
Probab=30.13 E-value=1.2e+02 Score=21.65 Aligned_cols=34 Identities=9% Similarity=0.161 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhHHHHHHHHHHhhhchHHHHHHHHHH
Q psy14075 324 IGDVAFCLGFAIGPAMSGTLVNTIGFEWMLFIIAIL 359 (414)
Q Consensus 324 ~~~~~~~~g~~ig~~~~g~l~~~~g~~~~~~~~~~~ 359 (414)
..+..-.+++++ ..+.|+..+.+++. ++.+.+.+
T Consensus 27 ~~q~ilti~aiV-g~i~Gf~~Qqls~t-vy~vg~~~ 60 (101)
T KOG4112|consen 27 FQQLILTIGAIV-GFIYGFAQQQLSVT-VYIVGAGF 60 (101)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHH-HHHHHHHH
Confidence 344444455544 45667777777753 34343333
No 366
>PF09527 ATPase_gene1: Putative F0F1-ATPase subunit (ATPase_gene1)
Probab=30.02 E-value=1.5e+02 Score=18.67 Aligned_cols=35 Identities=11% Similarity=0.018 Sum_probs=20.3
Q ss_pred HHHHHHHHhhhHHHHhhcc-cCCchhHHHHHHHHHH
Q psy14075 38 SKAFVQLLANPLVGILTHR-VGYSLPMFTGFVIMFL 72 (414)
Q Consensus 38 ~~~~~~~~~~~~~G~l~dr-~Grr~~l~~~~~~~~~ 72 (414)
.......+.....|+..|+ ++.++...+..++.++
T Consensus 8 ~~~~~~i~~g~~~G~~lD~~~~t~p~~~~~g~llG~ 43 (55)
T PF09527_consen 8 FTMAAPILVGFFLGYWLDKWFGTSPWFTLIGLLLGI 43 (55)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCChHHHHHHHHHHH
Confidence 3344455566677777776 6765665554444443
No 367
>TIGR03802 Asp_Ala_antiprt aspartate-alanine antiporter. All members of the seed alignment for this model are asparate-alanine anti-transporters (AspT) encoded next to the gene for aspartate 4-decarboxylase (AspD), which converts asparate to alanine, releasing CO2. The exchange of Asp for Ala is electrogenic, so the AspD/AspT system confers a proton-motive force. This transporter contains two copies of the AspT/YidE/YbjL antiporter duplication domain (TIGR01625).
Probab=29.26 E-value=4.1e+02 Score=26.59 Aligned_cols=6 Identities=0% Similarity=0.135 Sum_probs=2.5
Q ss_pred chHHHH
Q psy14075 348 GFEWML 353 (414)
Q Consensus 348 g~~~~~ 353 (414)
||..+|
T Consensus 160 gYav~Y 165 (562)
T TIGR03802 160 AYAVTY 165 (562)
T ss_pred eeehhh
Confidence 444443
No 368
>PF06645 SPC12: Microsomal signal peptidase 12 kDa subunit (SPC12); InterPro: IPR009542 This family consists of several microsomal signal peptidase 12 kDa subunit proteins. Translocation of polypeptide chains across the endoplasmic reticulum (ER) membrane is triggered by signal sequences. Subsequently, signal recognition particle interacts with its membrane receptor and the ribosome-bound nascent chain is targeted to the ER where it is transferred into a protein-conducting channel. At some point, a second signal sequence recognition event takes place in the membrane and translocation of the nascent chain through the membrane occurs. The signal sequence of most secretory and membrane proteins is cleaved off at this stage. Cleavage occurs by the signal peptidase complex (SPC) as soon as the lumenal domain of the translocating polypeptide is large enough to expose its cleavage site to the enzyme. The signal peptidase complex is possibly also involved in proteolytic events in the ER membrane other than the processing of the signal sequence, for example the further digestion of the cleaved signal peptide or the degradation of membrane proteins. Mammalian signal peptidase is as a complex of five different polypeptide chains. This family represents the 12 kDa subunit (SPC12).; GO: 0008233 peptidase activity, 0006465 signal peptide processing, 0005787 signal peptidase complex, 0016021 integral to membrane
Probab=29.10 E-value=1.5e+02 Score=20.38 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=16.4
Q ss_pred HhHHHHHHHHHHhhhchHHHHHHHHHHHHHHHH
Q psy14075 333 FAIGPAMSGTLVNTIGFEWMLFIIAILDFMYAP 365 (414)
Q Consensus 333 ~~ig~~~~g~l~~~~g~~~~~~~~~~~~~~~~~ 365 (414)
.++.+.+.|++.+.+ +..++..++..+++++
T Consensus 20 ~~iisfi~Gy~~q~~--~~~~~~~~~g~~~~~l 50 (76)
T PF06645_consen 20 SAIISFIVGYITQSF--SYTFYIYGAGVVLTLL 50 (76)
T ss_pred HHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHh
Confidence 344566778877754 3444444444444433
No 369
>PF01925 TauE: Sulfite exporter TauE/SafE; InterPro: IPR002781 This family is found in integral membrane proteins of prokaryotes which are uncharacterised.; GO: 0016021 integral to membrane
Probab=28.93 E-value=3.7e+02 Score=22.95 Aligned_cols=32 Identities=25% Similarity=0.410 Sum_probs=16.8
Q ss_pred HhhhhhhchhhhhHhhhhcCChhHHHHHHHHH
Q psy14075 129 LALGVLIGPPFGGIMYQFVGKTAPFLILSALA 160 (414)
Q Consensus 129 ~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~ 160 (414)
...+.++|.+++.++..+.+-+..-...++..
T Consensus 69 ~~~~~~~g~~iG~~l~~~l~~~~l~~~~~~~l 100 (240)
T PF01925_consen 69 LIIGALIGVVIGAWLLSLLPDDILKLIFGLFL 100 (240)
T ss_pred hhhHhHHHHHHHHhhhcchhHHHHHHHHHHHH
Confidence 34566666666777666544333334444433
No 370
>PF10785 NADH-u_ox-rdase: NADH-ubiquinone oxidoreductase complex I, 21 kDa subunit; InterPro: IPR019721 This domain is found in the N-terminal region of NADH-ubiquinone oxidoreductase 21kDa subunits from plants and fungi [].
Probab=28.92 E-value=2.1e+02 Score=20.21 Aligned_cols=40 Identities=23% Similarity=0.291 Sum_probs=27.9
Q ss_pred HHhhhHHHHhhcccCC-------chhHHHHHHHHHHHHHHHHhhhhH
Q psy14075 44 LLANPLVGILTHRVGY-------SLPMFTGFVIMFLSTLIFAFGRTY 83 (414)
Q Consensus 44 ~~~~~~~G~l~dr~Gr-------r~~l~~~~~~~~~~~~~~~~~~~~ 83 (414)
....+..+++.+|..+ ++.+.++.++...+..+++..+|.
T Consensus 32 ta~~p~~~~~~~~~~~~~~~~~~~~~~~~a~~ig~~gGfl~ayqrS~ 78 (86)
T PF10785_consen 32 TAASPPLGYYMERSAPSRVGRGGGPAMRLAGAIGFFGGFLLAYQRSS 78 (86)
T ss_pred HHHHHHHHHHHhcccccccccccchHHHHHHHHHHHHHHHHHHHHhh
Confidence 4455666677776554 678888888888888887776653
No 371
>PRK15049 L-asparagine permease; Provisional
Probab=28.89 E-value=5.6e+02 Score=25.08 Aligned_cols=46 Identities=13% Similarity=-0.019 Sum_probs=22.0
Q ss_pred CcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHH
Q psy14075 28 ETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLI 76 (414)
Q Consensus 28 s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~ 76 (414)
+..++..+.....+|..+...... ....-|+- .+++.++.++..++
T Consensus 31 ~~~~~~~i~~G~~IGsGiF~~~g~-~~~~aGp~--~il~~li~~i~~~~ 76 (499)
T PRK15049 31 GNRQVQMIAIGGAIGTGLFLGAGA-RLQMAGPA--LALVYLICGLFSFF 76 (499)
T ss_pred CHhHhHHHhhhccccchHHHhhHH-HHHhcCCH--HHHHHHHHHHHHHH
Confidence 334444455555556555554443 34555652 23455554444433
No 372
>PRK10263 DNA translocase FtsK; Provisional
Probab=28.67 E-value=3.7e+02 Score=29.87 Aligned_cols=34 Identities=15% Similarity=0.014 Sum_probs=20.3
Q ss_pred HHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHH
Q psy14075 238 SISYLIGTNLFGPLGHRMGRYLAALLGLLIIGIC 271 (414)
Q Consensus 238 ~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~ 271 (414)
..++++|..+...+...+|..-..++.++++.++
T Consensus 141 ~gGGIIG~lLs~lL~~LfG~vGa~LILLlllLIG 174 (1355)
T PRK10263 141 ASGGVIGSLLSTTLQPLLHSSGGTIALLCVWAAG 174 (1355)
T ss_pred cccchHHHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4577888888777777776644443333333333
No 373
>PHA03231 glycoprotein BALF4; Provisional
Probab=28.23 E-value=1.1e+02 Score=31.88 Aligned_cols=19 Identities=26% Similarity=0.385 Sum_probs=10.8
Q ss_pred HHHHHHHHhHHHHHHHHHH
Q psy14075 326 DVAFCLGFAIGPAMSGTLV 344 (414)
Q Consensus 326 ~~~~~~g~~ig~~~~g~l~ 344 (414)
+.+..++++++..+.|.+-
T Consensus 680 ~vv~~v~ga~~SiVsG~~s 698 (829)
T PHA03231 680 NVVSGVAGAVGSIVSGVIS 698 (829)
T ss_pred hhhhhHHHHHHHHHHHHHH
Confidence 4445566666666666543
No 374
>COG1811 Uncharacterized membrane protein, possible Na+ channel or pump [General function prediction only]
Probab=28.21 E-value=2.3e+02 Score=24.07 Aligned_cols=57 Identities=32% Similarity=0.358 Sum_probs=33.2
Q ss_pred HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHH
Q psy14075 239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIG 296 (414)
Q Consensus 239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~ 296 (414)
+++++|..+..++.||+++.-+-..++....++.-.....++.... +...+.|...|
T Consensus 14 ~G~iiG~l~~~klper~k~~l~~~~Gl~~l~iGI~m~~~~~n~~~~-ilslv~G~vIG 70 (228)
T COG1811 14 IGGIIGLLIGKKLPERIKDILMQCLGLAILGIGIKMALQAKNDIMI-LLALVIGAVIG 70 (228)
T ss_pred HHHHHHHHHcccCcHHHHHHHHHHHHHHHHHHHHHHHHhcCccHHH-HHHHHHHHHHH
Confidence 3555566666667777766666666777777766666555554433 33344444444
No 375
>PF09930 DUF2162: Predicted transporter (DUF2162); InterPro: IPR017199 This group represents a predicted membrane transporter, MTH672 type.
Probab=27.78 E-value=3.9e+02 Score=22.93 Aligned_cols=50 Identities=18% Similarity=0.265 Sum_probs=32.1
Q ss_pred HHHhCCCccchhhHhHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q psy14075 220 MDTMGADKWQQGVSFLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICL 272 (414)
Q Consensus 220 ~~~~g~~~~~~g~~~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~ 272 (414)
.+..+.+..+.|..........+ +....+.+|.+.++....+.....+++
T Consensus 123 a~~~~~s~~~ig~~~g~if~i~i---l~ss~i~r~~~~~~p~~LG~~Mi~~Gl 172 (224)
T PF09930_consen 123 APSIGLSGWEIGLVLGLIFFILI---LLSSFIFRRLKKPYPIILGNFMIFLGL 172 (224)
T ss_pred HHhcCchHHHHHHHHHHHHHHHH---HHHHHHHHHhcCCCchHHHHHHHHHHH
Confidence 34478888888877654444443 566667777776666666766665554
No 376
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=27.74 E-value=5.1e+02 Score=24.23 Aligned_cols=38 Identities=16% Similarity=0.318 Sum_probs=23.8
Q ss_pred hcCCCcchhhHHHHHHHHH-HhhhhhhchhhhhHhhhhcCChhHH
Q psy14075 110 ERYPDDRERGNAMGIALGG-LALGVLIGPPFGGIMYQFVGKTAPF 153 (414)
Q Consensus 110 ~~~~~~~~r~~~~~~~~~~-~~~g~~ig~~l~~~l~~~~gw~~~f 153 (414)
|+.| .+|-..++..... .+.|.++||.++ ..+||-..+
T Consensus 48 DYvP--~~~~vlfghhf~sIAGaGPI~GPi~a----a~~GwlPa~ 86 (376)
T PF02554_consen 48 DYVP--TNKWVLFGHHFASIAGAGPIVGPILA----AQFGWLPAL 86 (376)
T ss_pred CCCC--CchHHhhHHHHHHHhccccchHHHHH----HHhcchHHH
Confidence 5555 4566777776544 466677777665 357887444
No 377
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=27.18 E-value=2.6e+02 Score=20.62 Aligned_cols=18 Identities=22% Similarity=0.355 Sum_probs=10.1
Q ss_pred hhhhhHHHHHHHHHHHHH
Q psy14075 253 HRMGRYLAALLGLLIIGI 270 (414)
Q Consensus 253 d~~~~~~~~~~~~~~~~i 270 (414)
+|..+++.........++
T Consensus 84 er~~~~~~~a~~l~~~Gv 101 (113)
T PF13536_consen 84 ERLSPRRWLAILLILIGV 101 (113)
T ss_pred CCCCHHHHHHHHHHHHHH
Confidence 677777765444444433
No 378
>COG1983 PspC Putative stress-responsive transcriptional regulator [Transcription / Signal transduction mechanisms]
Probab=26.78 E-value=2e+02 Score=19.49 Aligned_cols=35 Identities=11% Similarity=0.236 Sum_probs=17.9
Q ss_pred HhhhhcCC-----hhHHHHHHHHH------HHHHHHHHHhccCCCC
Q psy14075 142 IMYQFVGK-----TAPFLILSALA------LGDGLLQLLLLQPGVV 176 (414)
Q Consensus 142 ~l~~~~gw-----~~~f~~~~~~~------~~~~~~~~~~~~~~~~ 176 (414)
-+.++++| |..|.+..... ++.-++.++..|+++.
T Consensus 20 Gla~yf~id~tlVRll~vl~~~~~~~~~~~ii~Yiia~~imP~~~~ 65 (70)
T COG1983 20 GLAEYFGIDPTLVRLLFVLLTLFGGLTGFGIIAYIIAALIMPSEED 65 (70)
T ss_pred hHHHHhCCChHHHHHHHHHHHHHhcchhHHHHHHHHHHHHCCCCcc
Confidence 35677776 34444444443 3334455556665543
No 379
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=26.53 E-value=1.6e+02 Score=18.02 Aligned_cols=7 Identities=14% Similarity=0.539 Sum_probs=2.7
Q ss_pred HHHHhcC
Q psy14075 366 LLYLLRN 372 (414)
Q Consensus 366 ~~~~~~~ 372 (414)
+.+.+++
T Consensus 26 ~~w~~~~ 32 (49)
T PF05545_consen 26 VIWAYRP 32 (49)
T ss_pred HHHHHcc
Confidence 3333433
No 380
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family. TMHMM on members of this model shows a consensus of 11 transmembrane helices separated into two clusters, an N-terminal cluster of 6 and a central cluster of 5. This would indicate two non-membrane domains one on each side of the membrane
Probab=26.12 E-value=4.4e+02 Score=27.26 Aligned_cols=120 Identities=13% Similarity=-0.000 Sum_probs=0.0
Q ss_pred HHhhhHHHHhhcc----cCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHH-HHHhhhhhhhhhhHHHHHhhcCCCcchh
Q psy14075 44 LLANPLVGILTHR----VGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLAR-SLQGIGSSCSSVSGMGMLAERYPDDRER 118 (414)
Q Consensus 44 ~~~~~~~G~l~dr----~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r-~l~G~~~~~~~~~~~~~i~~~~~~~~~r 118 (414)
.....+.+.+.|. -||.+-++++.++++++++...+...+..+++.- ++.+++.++.... .+|
T Consensus 37 l~lG~ia~~l~D~~~~~~~R~~~l~it~~~f~i~sl~v~ll~~~p~~~~~~l~~~tf~~~mlga~------------G~r 104 (701)
T TIGR01667 37 LCLGIIAAGLDDLDDRLTGRLKNLIITLSCFSIASFLVQLLFPKPWLFPFLLTLLTFGFILLGAL------------GQR 104 (701)
T ss_pred HHHhhHhhccCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHHHHHHHHHHHHHHHHh------------hhh
Q ss_pred hHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy14075 119 GNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQ 178 (414)
Q Consensus 119 ~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (414)
...++.-.....+-.++++-..+ ..+.-...+...++...+..++.+.+.|..+.++
T Consensus 105 ~~~I~f~~L~~aiytml~~~~~~---~w~~~pllll~GalwY~l~sll~~~l~p~rp~q~ 161 (701)
T TIGR01667 105 YATIAFASLLAAIYTMLGAGEVP---VWFIEPLLILAGTLWYGLLTLIWFLLFPNQPLQE 161 (701)
T ss_pred HHhHHHHHHHHHHHHHcCccccc---HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHH
No 381
>TIGR00427 membrane protein, MarC family. MarC is a protein that spans the plasma membrane multiple times and once was thought to be a multiple antibiotic resistance protein. The function for this family is unknown.
Probab=25.70 E-value=4e+02 Score=22.36 Aligned_cols=35 Identities=11% Similarity=0.009 Sum_probs=19.4
Q ss_pred hHHHHHHHHHHhhhch-HHHHHHHHHHHHHHHHHHH
Q psy14075 334 AIGPAMSGTLVNTIGF-EWMLFIIAILDFMYAPLLY 368 (414)
Q Consensus 334 ~ig~~~~g~l~~~~g~-~~~~~~~~~~~~~~~~~~~ 368 (414)
.+..+.+..+.+.+|. -..|-+.+.+.+....+-.
T Consensus 55 l~f~~~G~~iL~~fgIsl~afrIaGGiiL~~ia~~m 90 (201)
T TIGR00427 55 LIFLVFGDTILKLFGISIDAFRIAGGILLFTIAMDM 90 (201)
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHH
Confidence 3444555566777773 3456666665555444433
No 382
>COG2233 UraA Xanthine/uracil permeases [Nucleotide transport and metabolism]
Probab=25.04 E-value=6.3e+02 Score=24.40 Aligned_cols=98 Identities=17% Similarity=0.084 Sum_probs=65.2
Q ss_pred hhhhhcCCcchHHHHHHHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhh---hhHHHHHHHHHHHhhhh
Q psy14075 21 RHKYLMGETKAVGVMFGSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFG---RTYGVLFLARSLQGIGS 97 (414)
Q Consensus 21 ~~~~~g~s~~~~g~~~s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~---~~~~~l~~~r~l~G~~~ 97 (414)
+..++|++..|...+.+.-.+...++.++--....+.|-|-....+.-...++-+..... +.....+.+-+..|+..
T Consensus 40 vg~a~~l~~~~~~~Lis~~l~~~GiaTllq~~~~~~~g~~lP~~lG~sFafi~p~i~~~~~~g~~~~~~~G~ii~ag~~~ 119 (451)
T COG2233 40 VGLALGLSAEDTAYLISADLLASGIGTLLQLLGTGPGGSGLPSYLGSSFAFVAPMIAIGGTTGDGIAALLGGIIAAGLVY 119 (451)
T ss_pred hccCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccCcccCCCeeEechHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 356789999999999999999999998887765555665555554444444444444332 23666666667777766
Q ss_pred hhhhhhHHHHHhhcCCCcchhh
Q psy14075 98 SCSSVSGMGMLAERYPDDRERG 119 (414)
Q Consensus 98 ~~~~~~~~~~i~~~~~~~~~r~ 119 (414)
-...+.....+.+.+|| ---|
T Consensus 120 ~li~~~~~~~l~rlfPP-vVtG 140 (451)
T COG2233 120 FLISPIVKIRLARLFPP-VVTG 140 (451)
T ss_pred HHHHHHHHHHHHHhCCC-ceEE
Confidence 55555433278888887 4444
No 383
>TIGR01666 YCCS hypothetical membrane protein, TIGR01666. This model represents a clade of sequences from gamma and beta proteobacteria. These proteins are 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from E. coli has the name yccS.
Probab=24.59 E-value=4.5e+02 Score=27.17 Aligned_cols=120 Identities=12% Similarity=0.037 Sum_probs=0.0
Q ss_pred HHhhhHHHHhhcc----cCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHH-HHHhhhhhhhhhhHHHHHhhcCCCcchh
Q psy14075 44 LLANPLVGILTHR----VGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLAR-SLQGIGSSCSSVSGMGMLAERYPDDRER 118 (414)
Q Consensus 44 ~~~~~~~G~l~dr----~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r-~l~G~~~~~~~~~~~~~i~~~~~~~~~r 118 (414)
...+.+.+.++|. -||.+-+.++.++++++++...+...++++++.- ++.+++.++.... .+|
T Consensus 37 l~LG~ia~al~D~d~~~~~R~~~l~~t~~~f~i~sl~v~ll~~~p~lf~~~l~~~tf~~~mlga~------------G~R 104 (704)
T TIGR01666 37 LILGIIAAALVDLDDRLTGRLKNVIFTLICFSIASFSVELLFGKPWLFAVGLTVSTFGFIMLGAV------------GQR 104 (704)
T ss_pred HHHHHHhhccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHh------------hhh
Q ss_pred hHHHHHHHHHHhhhhhhchhhhhHhhhhcCChhHHHHHHHHHHHHHHHHHHhccCCCCCC
Q psy14075 119 GNAMGIALGGLALGVLIGPPFGGIMYQFVGKTAPFLILSALALGDGLLQLLLLQPGVVKQ 178 (414)
Q Consensus 119 ~~~~~~~~~~~~~g~~ig~~l~~~l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (414)
....+.-+....+-.++|+-..+ ..+.-...+...++...+..++.+.+.|..+.++
T Consensus 105 ya~Iaf~tLliaiytmlg~~~~~---~w~~~pllll~GalwY~llsl~~~~l~p~rp~q~ 161 (704)
T TIGR01666 105 YATIAFGSLLVALYTMLGYIEVN---VWFIQPVMLLCGTLWYSVVTLIVHLFFPNRPVQE 161 (704)
T ss_pred HHHHHHHHHHHHHHHHhcccccc---hHHHHHHHHHHHHHHHHHHHHHHHHHcCCChHHH
No 384
>PRK01862 putative voltage-gated ClC-type chloride channel ClcB; Provisional
Probab=24.18 E-value=7.3e+02 Score=24.83 Aligned_cols=39 Identities=10% Similarity=0.120 Sum_probs=25.3
Q ss_pred HHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh
Q psy14075 106 GMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY 144 (414)
Q Consensus 106 ~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~ 144 (414)
..++++++-.+++-+..-....+.+++.....+++|.+.
T Consensus 150 ~~~~~~~~~~~~~~r~l~~~G~aAglaa~F~aPl~g~lF 188 (574)
T PRK01862 150 SLVGRFAHFDPPRLRLLVACGAAAGITSAYNAPIAGAFF 188 (574)
T ss_pred HHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCchHHHHH
Confidence 345666531122334455567888899999999998775
No 385
>PF13937 DUF4212: Domain of unknown function (DUF4212)
Probab=24.06 E-value=2.6e+02 Score=19.56 Aligned_cols=53 Identities=9% Similarity=-0.008 Sum_probs=30.3
Q ss_pred chhhHHHHHHHHHHhhhhhhchhhhhHhh--hhcCChhHHHHHHHHHHHHHHHHH
Q psy14075 116 RERGNAMGIALGGLALGVLIGPPFGGIMY--QFVGKTAPFLILSALALGDGLLQL 168 (414)
Q Consensus 116 ~~r~~~~~~~~~~~~~g~~ig~~l~~~l~--~~~gw~~~f~~~~~~~~~~~~~~~ 168 (414)
+++.....++.....+...+++.++..+. +..||...|++.+=-+++..++..
T Consensus 9 ~n~rl~~~lL~iW~vvsfg~~~lfa~~Ln~~~~~GfPlgfw~aaQGsi~~fviLi 63 (81)
T PF13937_consen 9 KNLRLIAILLAIWFVVSFGVGILFADELNQITFGGFPLGFWFAAQGSIIVFVILI 63 (81)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCeeCCCChHHHHHHHhHHHHHHHHH
Confidence 34444444444444455555555655553 236899999987776666554433
No 386
>PRK12847 ubiA 4-hydroxybenzoate polyprenyltransferase; Reviewed
Probab=24.03 E-value=5.2e+02 Score=23.03 Aligned_cols=15 Identities=13% Similarity=0.583 Sum_probs=7.2
Q ss_pred HHHHHHHHHHHHHHH
Q psy14075 63 MFTGFVIMFLSTLIF 77 (414)
Q Consensus 63 l~~~~~~~~~~~~~~ 77 (414)
+..+.+...++..+.
T Consensus 95 ~~~~~~l~~~~~~l~ 109 (285)
T PRK12847 95 LILLFILLLIALVIL 109 (285)
T ss_pred HHHHHHHHHHHHHHH
Confidence 444455555554443
No 387
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=23.70 E-value=85 Score=23.83 Aligned_cols=19 Identities=0% Similarity=0.326 Sum_probs=9.9
Q ss_pred hhhchHHHHHHHHHHHHHH
Q psy14075 345 NTIGFEWMLFIIAILDFMY 363 (414)
Q Consensus 345 ~~~g~~~~~~~~~~~~~~~ 363 (414)
|...|+......++++++.
T Consensus 31 D~tpWNysiL~Ls~vvlvi 49 (125)
T PF15048_consen 31 DATPWNYSILALSFVVLVI 49 (125)
T ss_pred CCCCcchHHHHHHHHHHHH
Confidence 3455766665554444433
No 388
>PF10183 ESSS: ESSS subunit of NADH:ubiquinone oxidoreductase (complex I) ; InterPro: IPR019329 NADH:ubiquinone oxidoreductase (complex I) (1.6.5.3 from EC) is a respiratory-chain enzyme that catalyses the transfer of two electrons from NADH to ubiquinone in a reaction that is associated with proton translocation across the membrane (NADH + ubiquinone = NAD+ + ubiquinol) []. Complex I is a major source of reactive oxygen species (ROS) that are predominantly formed by electron transfer from FMNH(2). Complex I is found in bacteria, cyanobacteria (as a NADH-plastoquinone oxidoreductase), archaea [], mitochondira, and in the hydrogenosome, a mitochondria-derived organelle. In general, the bacterial complex consists of 14 different subunits, while the mitochondrial complex contains homologues to these subunits in addition to approximately 31 additional proteins []. Mitochondrial complex I, which is located in the inner mitochondrial membrane, is the largest multimeric respiratory enzyme in the mitochondria, consisting of more than 40 subunits, one FMN co-factor and eight FeS clusters []. The assembly of mitochondrial complex I is an intricate process that requires the cooperation of the nuclear and mitochondrial genomes [, ]. Mitochondrial complex I can cycle between active and deactive forms that can be distinguished by the reactivity towards divalent cations and thiol-reactive agents. All redox prosthetic groups reside in the peripheral arm of the L-shaped structure. The NADH oxidation domain harbouring the FMN cofactor is connected via a chain of iron-sulphur clusters to the ubiquinone reduction site that is located in a large pocket formed by the PSST and 49kDa subunits of complex I []. This entry represents the ESSS subunit from mitochondrial NADH:ubiquinone oxidoreductase (complex I). It carries mitochondrial import sequences [].
Probab=23.52 E-value=1.3e+02 Score=22.28 Aligned_cols=33 Identities=18% Similarity=0.050 Sum_probs=23.9
Q ss_pred hhhhcCChhHHHHHHHHHHHHHHHHHHhccCCC
Q psy14075 143 MYQFVGKTAPFLILSALALGDGLLQLLLLQPGV 175 (414)
Q Consensus 143 l~~~~gw~~~f~~~~~~~~~~~~~~~~~~~~~~ 175 (414)
-.+..+|+.+|++...++++.+.+.+...|+..
T Consensus 53 ~~d~e~we~~~f~~~~~~~v~~~~~~~y~PD~~ 85 (105)
T PF10183_consen 53 KRDWEGWELPFFFGFSGSLVFGGVFLAYKPDTS 85 (105)
T ss_pred cchHhhhHHHHHHHHHHHHHHHHHHHHcCCCCC
Confidence 345578999999887777777777776666543
No 389
>TIGR00814 stp serine transporter. The HAAAP family includes well characterized aromatic amino acid:H+ symport permeases and hydroxy amino acid permeases. This subfamily is specific for hydroxy amino acid transporters and includes the serine permease, SdaC, of E. coli, and the threonine permease, TdcC, of E. coli.
Probab=22.86 E-value=6.6e+02 Score=23.80 Aligned_cols=26 Identities=23% Similarity=0.331 Sum_probs=20.7
Q ss_pred cchhhHHHHHHHHHHhhhhhhchhhh
Q psy14075 115 DRERGNAMGIALGGLALGVLIGPPFG 140 (414)
Q Consensus 115 ~~~r~~~~~~~~~~~~~g~~ig~~l~ 140 (414)
+++.+....+..+..+.|.+.-|..+
T Consensus 3 ~~d~~w~~~l~gt~IGaGiL~LP~~a 28 (397)
T TIGR00814 3 KTDTGWMLGLYGTAIGAGVLFLPIQA 28 (397)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHH
Confidence 46778888888888888888888753
No 390
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=22.78 E-value=5.3e+02 Score=23.31 Aligned_cols=108 Identities=11% Similarity=-0.050 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCCCCchhhhhccChHHHHHHHHHHHHHHHHHhhhhchHHHHHHHhCCCccchhhH
Q psy14075 154 LILSALALGDGLLQLLLLQPGVVKQEVEPPTLKSLVMDPYILIAAGAITFANTGIAMLEPSLPIWMMDTMGADKWQQGVS 233 (414)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~ 233 (414)
.+.++...+...+--.-..+.++...+++...++.+|+|..|...............-..+.|.-+.+.+|
T Consensus 13 v~ss~~~~~g~~lqk~~~~r~~~~~~~~~~~~~~~l~~~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg--------- 83 (300)
T PF05653_consen 13 VVSSIFIAVGFNLQKKSHLRLPRGSLRAGSGGRSYLRRPLWWIGLLLMVLGEILNFVALGFAPASLVAPLG--------- 83 (300)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcccccccchhhHHHhhHHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHH---------
Q ss_pred hHHHHHHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHh
Q psy14075 234 FLPASISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMI 275 (414)
Q Consensus 234 ~~~~~~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~ 275 (414)
...++.+.+.+....|-+-++.-..|..+..++..++
T Consensus 84 -----~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~li 120 (300)
T PF05653_consen 84 -----ALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLI 120 (300)
T ss_pred -----hhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheee
No 391
>PF02447 GntP_permease: GntP family permease; InterPro: IPR003474 This is a family of integral membrane permeases that are involved in gluconate uptake. Escherichia coli contains several members of this family including GntU, a low affinity transporter [] and GntT, a high affinity transporter [].; GO: 0015128 gluconate transmembrane transporter activity, 0035429 gluconate transmembrane transport, 0016020 membrane
Probab=22.77 E-value=7e+02 Score=24.08 Aligned_cols=28 Identities=21% Similarity=0.211 Sum_probs=15.0
Q ss_pred HhHHHHHHHHhhhhh---------hhhhhhhhhhHHH
Q psy14075 233 SFLPASISYLIGTNL---------FGPLGHRMGRYLA 260 (414)
Q Consensus 233 ~~~~~~~~~~~~~~~---------~g~l~d~~~~~~~ 260 (414)
+-.+..++.++|.++ .-.+.+++|+|+.
T Consensus 61 igivI~lG~~iG~~l~~SGaa~~IA~~l~~~~G~k~~ 97 (441)
T PF02447_consen 61 IGIVIALGAMIGKLLEESGAAERIANTLLKKFGEKRA 97 (441)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHcCCCcc
Confidence 334445666666654 2334456676654
No 392
>PF07456 Hpre_diP_synt_I: Heptaprenyl diphosphate synthase component I; InterPro: IPR010898 This family contains component I of bacterial heptaprenyl diphosphate synthase (2.5.1.30 from EC) (approximately 170 residues long). This is one of the two dissociable subunits that form the enzyme, both of which are required for the catalysis of the biosynthesis of the side chain of menaquinone-7 [].
Probab=22.49 E-value=3e+02 Score=21.84 Aligned_cols=51 Identities=18% Similarity=0.048 Sum_probs=32.4
Q ss_pred HHHHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHHHHHhhhhHHHHHHHHHHH
Q psy14075 37 GSKAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLARSLQ 93 (414)
Q Consensus 37 s~~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~r~l~ 93 (414)
-.++++..+.+...-.+..|..||+.=.++.- ++-+.++|..|+.++.++.
T Consensus 68 f~~Sl~Ggl~S~~vM~ll~~~~~~~~S~~giS------i~Gai~HN~gQl~va~~i~ 118 (148)
T PF07456_consen 68 FLFSLAGGLLSLLVMALLKKLFKKKFSLIGIS------IAGAIAHNIGQLIVASLII 118 (148)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCCccHHHHH------HHHHHHHHHHHHHHHHHHH
Confidence 45566677777777778888877766444332 3335667777777776543
No 393
>PF06783 UPF0239: Uncharacterised protein family (UPF0239); InterPro: IPR009621 This is a group of transmembrane proteins of unknown function.; GO: 0016021 integral to membrane
Probab=22.39 E-value=1.3e+02 Score=21.07 Aligned_cols=20 Identities=25% Similarity=0.429 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy14075 350 EWMLFIIAILDFMYAPLLYL 369 (414)
Q Consensus 350 ~~~~~~~~~~~~~~~~~~~~ 369 (414)
++..++.+++-+++++...+
T Consensus 23 RYGLf~GAIFQliCilAiI~ 42 (85)
T PF06783_consen 23 RYGLFVGAIFQLICILAIIL 42 (85)
T ss_pred HHHHHHHHHHHHHHHHheee
Confidence 44455666666665544444
No 394
>PLN02332 membrane bound O-acyl transferase (MBOAT) family protein
Probab=22.29 E-value=7.3e+02 Score=24.12 Aligned_cols=32 Identities=16% Similarity=0.209 Sum_probs=20.9
Q ss_pred CCchhHHHHHHHHHHHHHHHHhhhhHHHHHHH
Q psy14075 58 GYSLPMFTGFVIMFLSTLIFAFGRTYGVLFLA 89 (414)
Q Consensus 58 Grr~~l~~~~~~~~~~~~~~~~~~~~~~l~~~ 89 (414)
|.|+...-..+.+.++.+.-++.+++....+.
T Consensus 339 ~~~~~~~~~~~t~~~sa~WHG~~~gYyl~fl~ 370 (465)
T PLN02332 339 GKKPGFFQLLATQTVSAVWHGLYPGYILFFVQ 370 (465)
T ss_pred CcchhHHHHHHHHHHHHHHhcCCcHHHHHHHH
Confidence 34555555566777777888887777665533
No 395
>PF12273 RCR: Chitin synthesis regulation, resistance to Congo red; InterPro: IPR020999 RCR proteins are ER membrane proteins that regulate chitin deposition in fungal cell walls. Although chitin, a linear polymer of beta-1,4-linked N-acetylglucosamine, constitutes only 2% of the cell wall it plays a vital role in the overall protection of the cell wall against stress, noxious chemicals and osmotic pressure changes. Congo red is a cell wall-disrupting benzidine-type dye extensively used in many cell wall mutant studies that specifically targets chitin in yeast cells and inhibits growth. RCR proteins render the yeasts resistant to Congo red by diminishing the content of chitin in the cell wall []. RCR proteins are probably regulating chitin synthase III interact directly with ubiquitin ligase Rsp5, and the VPEY motif is necessary for this, via interaction with the WW domains of Rsp5 [].
Probab=21.85 E-value=47 Score=25.61 Aligned_cols=16 Identities=13% Similarity=-0.097 Sum_probs=7.4
Q ss_pred hhHHHHHHHHHHHHHH
Q psy14075 150 TAPFLILSALALGDGL 165 (414)
Q Consensus 150 ~~~f~~~~~~~~~~~~ 165 (414)
||++++..++.+++++
T Consensus 1 RW~l~~iii~~i~l~~ 16 (130)
T PF12273_consen 1 RWVLFAIIIVAILLFL 16 (130)
T ss_pred CeeeHHHHHHHHHHHH
Confidence 4555544444444333
No 396
>COG2119 Predicted membrane protein [Function unknown]
Probab=21.79 E-value=3.3e+02 Score=22.55 Aligned_cols=37 Identities=16% Similarity=0.232 Sum_probs=28.5
Q ss_pred HHHHHHHhhhHHHHhhcccCCchhHHHHHHHHHHHHH
Q psy14075 39 KAFVQLLANPLVGILTHRVGYSLPMFTGFVIMFLSTL 75 (414)
Q Consensus 39 ~~~~~~~~~~~~G~l~dr~Grr~~l~~~~~~~~~~~~ 75 (414)
..++..++...+.++++|+..|++-.++.+++.+..+
T Consensus 143 ~~l~s~laVl~G~~ia~ki~~r~l~~~aallFl~fal 179 (190)
T COG2119 143 MILASVLAVLLGKLIAGKLPERLLRFIAALLFLIFAL 179 (190)
T ss_pred HHHHHHHHHHHHHHHHccCCHHHHHHHHHHHHHHHHH
Confidence 3456677777889999999999998887777665543
No 397
>COG0038 EriC Chloride channel protein EriC [Inorganic ion transport and metabolism]
Probab=21.53 E-value=7.4e+02 Score=23.89 Aligned_cols=40 Identities=18% Similarity=0.248 Sum_probs=29.0
Q ss_pred HHHHhhcCCCcchhhHHHHHHHHHHhhhhhhchhhhhHhh
Q psy14075 105 MGMLAERYPDDRERGNAMGIALGGLALGVLIGPPFGGIMY 144 (414)
Q Consensus 105 ~~~i~~~~~~~~~r~~~~~~~~~~~~~g~~ig~~l~~~l~ 144 (414)
...++++++.+++..|..-....+.+++.....++++.+.
T Consensus 144 g~~~~~~l~~~~~~~r~Ll~~GaAaGlaaaF~aPlagvlF 183 (443)
T COG0038 144 GSLLGRLLKLSREDRRILLAAGAAAGLAAAFNAPLAGALF 183 (443)
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCcHHHHHH
Confidence 3577888863234455555667888999999999998875
No 398
>COG5547 Small integral membrane protein [Function unknown]
Probab=21.15 E-value=2.4e+02 Score=18.10 Aligned_cols=18 Identities=17% Similarity=0.403 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHHHHhhh
Q psy14075 260 AALLGLLIIGICLMMIPL 277 (414)
Q Consensus 260 ~~~~~~~~~~i~~~~~~~ 277 (414)
.++.+++...++++.+.+
T Consensus 10 pIIgglvglliAili~t~ 27 (62)
T COG5547 10 PIIGGLVGLLIAILILTF 27 (62)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 344455555555554444
No 399
>PF13440 Polysacc_synt_3: Polysaccharide biosynthesis protein
Probab=21.08 E-value=5.1e+02 Score=21.86 Aligned_cols=32 Identities=6% Similarity=0.019 Sum_probs=18.4
Q ss_pred hhchHHHHHHHhCCCccchhhHhHHHHHHHHhh
Q psy14075 212 EPSLPIWMMDTMGADKWQQGVSFLPASISYLIG 244 (414)
Q Consensus 212 ~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~ 244 (414)
....+.++...+- ++.+.|.+.....+...+.
T Consensus 202 ~~~~~~~li~~~l-~~~~~g~y~~a~~l~~~~~ 233 (251)
T PF13440_consen 202 LSQIDRLLIGYFL-GPEAVGIYSVAQRLASLPA 233 (251)
T ss_pred HHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHH
Confidence 3455666665422 6677777766655555443
No 400
>PHA03049 IMV membrane protein; Provisional
Probab=21.06 E-value=1.6e+02 Score=19.50 Aligned_cols=14 Identities=14% Similarity=0.232 Sum_probs=5.4
Q ss_pred HHHHHHHHHHHHHh
Q psy14075 357 AILDFMYAPLLYLL 370 (414)
Q Consensus 357 ~~~~~~~~~~~~~~ 370 (414)
.+|.++..++.+-+
T Consensus 9 iICVaIi~lIvYgi 22 (68)
T PHA03049 9 IICVVIIGLIVYGI 22 (68)
T ss_pred HHHHHHHHHHHHHH
Confidence 33333333333333
No 401
>COG1971 Predicted membrane protein [Function unknown]
Probab=20.43 E-value=5.1e+02 Score=21.58 Aligned_cols=29 Identities=34% Similarity=0.636 Sum_probs=13.9
Q ss_pred hhhhhhhhhhhhhhHHHHHHHHHHHHHHH
Q psy14075 244 GTNLFGPLGHRMGRYLAALLGLLIIGICL 272 (414)
Q Consensus 244 ~~~~~g~l~d~~~~~~~~~~~~~~~~i~~ 272 (414)
|..++.++...+|.+--+..+.++..++.
T Consensus 153 G~~IG~~~g~~~g~~ae~lgGiiLI~~G~ 181 (190)
T COG1971 153 GAIIGRKLGKFLGKYAEILGGIILIGIGV 181 (190)
T ss_pred HHHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 33333334444455555555555555553
No 402
>PF04024 PspC: PspC domain; InterPro: IPR007168 This domain is found in Phage shock protein C (PspC) that is thought to be a transcriptional regulator. The presumed domain is 60 amino acid residues in length.
Probab=20.26 E-value=2.5e+02 Score=18.31 Aligned_cols=34 Identities=21% Similarity=0.244 Sum_probs=16.5
Q ss_pred HhhhhcCC-----hhHHHHHHHHH---HHHHHHHHHhccCCC
Q psy14075 142 IMYQFVGK-----TAPFLILSALA---LGDGLLQLLLLQPGV 175 (414)
Q Consensus 142 ~l~~~~gw-----~~~f~~~~~~~---~~~~~~~~~~~~~~~ 175 (414)
-+.+++|| |..|.+...+. ++.-++.+++.|+++
T Consensus 19 GlA~~~gid~~~vRl~~v~l~~~~~~~~l~Y~~~w~~lP~~~ 60 (61)
T PF04024_consen 19 GLAEYFGIDPTLVRLIFVVLTFFTGGGILLYLILWLLLPKEP 60 (61)
T ss_pred HHHHHHCcCHHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCC
Confidence 35556664 55565555543 233334445555543
No 403
>PF04474 DUF554: Protein of unknown function (DUF554); InterPro: IPR007563 This is a family of uncharacterised prokaryotic proteins. Multiple predicted transmembrane regions suggest that the protein is membrane associated.
Probab=20.03 E-value=4.1e+02 Score=22.88 Aligned_cols=59 Identities=29% Similarity=0.347 Sum_probs=34.4
Q ss_pred HHHHhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHHHhh
Q psy14075 239 ISYLIGTNLFGPLGHRMGRYLAALLGLLIIGICLMMIPLARNINHLIVPNAGLGFAIGMV 298 (414)
Q Consensus 239 ~~~~~~~~~~g~l~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 298 (414)
+++.+|..+..++.||+.+......+.....++.-...-.++ ....+..+..|...|-.
T Consensus 13 ~G~~iG~~~~~~i~~~~~~~l~~~~Gl~~l~iGi~~~~~~~~-~~~vi~slvlG~iiGe~ 71 (226)
T PF04474_consen 13 LGGLIGLLLGRRIPERIKDTLMQALGLCVLAIGISMALKGQN-PLLVILSLVLGTIIGEL 71 (226)
T ss_pred HHHHHHHHHcCCCCHHHHHHHHHHhhHHHHHHHHHHHHccCc-cHHHHHHHHHHHHHHHH
Confidence 456666666667777777666666666666666544444434 33445555556555544
Done!