Query psy14077
Match_columns 296
No_of_seqs 175 out of 1289
Neff 5.8
Searched_HMMs 29240
Date Fri Aug 16 18:59:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14077.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14077hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3ocr_A Class II aldolase/adduc 100.0 3.3E-29 1.1E-33 232.4 12.8 167 1-179 60-239 (273)
2 1e4c_P L-fuculose 1-phosphate 99.9 7.2E-28 2.5E-32 215.4 13.3 161 1-180 32-204 (215)
3 2z7b_A MLR6791 protein; class 99.9 2E-26 7E-31 213.2 16.4 160 1-178 66-245 (270)
4 1k0w_A L-ribulose 5 phosphate 99.9 4.6E-26 1.6E-30 205.5 10.9 162 1-179 31-219 (231)
5 2opi_A L-fuculose-1-phosphate 99.9 6.5E-26 2.2E-30 202.3 11.6 159 1-179 32-203 (212)
6 2irp_A Putative aldolase class 99.9 5.2E-25 1.8E-29 195.6 10.6 151 1-164 38-207 (208)
7 2v9l_A Rhamnulose-1-phosphate 99.9 4.9E-25 1.7E-29 204.1 9.6 164 8-180 68-261 (274)
8 2fk5_A Fuculose-1-phosphate al 99.9 5.3E-25 1.8E-29 195.3 9.4 141 7-166 34-192 (200)
9 1pvt_A Sugar-phosphate aldolas 99.9 3.8E-25 1.3E-29 200.5 7.5 157 9-172 59-235 (238)
10 3m4r_A Uncharacterized protein 99.9 3.2E-23 1.1E-27 186.7 1.8 134 8-164 56-221 (222)
11 1o5k_A DHDPS, dihydrodipicolin 54.8 71 0.0024 28.9 9.8 32 114-145 29-61 (306)
12 3e96_A Dihydrodipicolinate syn 44.7 89 0.003 28.4 8.8 105 114-247 29-136 (316)
13 2ehh_A DHDPS, dihydrodipicolin 41.0 1.6E+02 0.0054 26.3 9.8 31 115-145 18-49 (294)
14 3na8_A Putative dihydrodipicol 40.9 1.4E+02 0.0047 27.2 9.4 105 114-247 41-149 (315)
15 3daq_A DHDPS, dihydrodipicolin 40.8 1.6E+02 0.0056 26.2 9.8 105 114-247 19-127 (292)
16 1xky_A Dihydrodipicolinate syn 40.6 1.5E+02 0.0051 26.6 9.6 32 114-145 29-61 (301)
17 3flu_A DHDPS, dihydrodipicolin 40.0 1.7E+02 0.0057 26.3 9.8 104 114-247 24-132 (297)
18 3si9_A DHDPS, dihydrodipicolin 37.3 1.8E+02 0.0061 26.4 9.6 104 114-247 39-147 (315)
19 2wkj_A N-acetylneuraminate lya 37.2 1.6E+02 0.0055 26.5 9.2 32 114-145 28-60 (303)
20 3cpr_A Dihydrodipicolinate syn 36.6 1.6E+02 0.0054 26.5 9.0 31 114-144 33-64 (304)
21 2rfg_A Dihydrodipicolinate syn 36.4 1.8E+02 0.0062 26.0 9.4 32 114-145 17-49 (297)
22 2yxg_A DHDPS, dihydrodipicolin 35.3 1.9E+02 0.0064 25.8 9.3 31 115-145 18-49 (289)
23 3d0c_A Dihydrodipicolinate syn 35.3 1.4E+02 0.0047 27.1 8.4 105 114-247 29-136 (314)
24 3dz1_A Dihydrodipicolinate syn 35.1 1.1E+02 0.0039 27.6 7.9 103 114-247 25-131 (313)
25 2ojp_A DHDPS, dihydrodipicolin 35.0 1.6E+02 0.0056 26.2 8.8 32 114-145 18-50 (292)
26 3m5v_A DHDPS, dihydrodipicolin 35.0 1.8E+02 0.0061 26.1 9.1 104 114-247 24-133 (301)
27 2vc6_A MOSA, dihydrodipicolina 34.2 2.1E+02 0.0072 25.4 9.4 31 114-144 17-48 (292)
28 3l21_A DHDPS, dihydrodipicolin 34.1 1.9E+02 0.0066 25.9 9.2 104 114-247 32-140 (304)
29 1f6k_A N-acetylneuraminate lya 34.1 2.1E+02 0.0073 25.4 9.5 32 114-145 20-53 (293)
30 3eb2_A Putative dihydrodipicol 33.9 1.5E+02 0.0051 26.7 8.4 105 114-247 21-129 (300)
31 3tak_A DHDPS, dihydrodipicolin 33.3 1.9E+02 0.0064 25.7 8.9 104 114-247 18-126 (291)
32 2v9d_A YAGE; dihydrodipicolini 33.2 2.3E+02 0.0077 26.1 9.7 32 114-145 48-80 (343)
33 3qze_A DHDPS, dihydrodipicolin 33.1 2E+02 0.0068 26.0 9.2 104 114-247 40-148 (314)
34 3a5f_A Dihydrodipicolinate syn 31.4 1.6E+02 0.0055 26.2 8.1 31 115-145 19-50 (291)
35 3fkr_A L-2-keto-3-deoxyarabona 30.0 2.6E+02 0.009 25.1 9.4 32 114-145 25-57 (309)
36 2r8w_A AGR_C_1641P; APC7498, d 29.7 1.8E+02 0.0062 26.6 8.3 31 114-144 51-82 (332)
37 3b4u_A Dihydrodipicolinate syn 28.4 1.6E+02 0.0055 26.3 7.6 32 114-145 20-52 (294)
38 3h5d_A DHDPS, dihydrodipicolin 26.7 1.1E+02 0.0037 27.8 6.1 104 115-247 25-133 (311)
39 4dpp_A DHDPS 2, dihydrodipicol 26.5 2.4E+02 0.0084 26.3 8.7 104 114-246 76-183 (360)
40 3s5o_A 4-hydroxy-2-oxoglutarat 26.5 2.6E+02 0.0089 25.1 8.7 33 114-146 31-64 (307)
41 2r91_A 2-keto-3-deoxy-(6-phosp 22.8 2.5E+02 0.0087 24.8 7.8 31 115-145 16-47 (286)
42 3qfe_A Putative dihydrodipicol 22.7 3.4E+02 0.012 24.5 8.7 32 114-145 28-60 (318)
43 1w3i_A EDA, 2-keto-3-deoxy glu 22.1 3E+02 0.01 24.4 8.2 32 114-145 16-48 (293)
44 1lts_C Heat-labIle enterotoxin 21.1 33 0.0011 22.5 1.0 18 230-247 10-27 (41)
45 2hmc_A AGR_L_411P, dihydrodipi 20.4 3.7E+02 0.013 24.6 8.6 32 114-145 43-75 (344)
46 2ln3_A De novo designed protei 20.4 49 0.0017 23.9 1.9 19 227-245 32-50 (83)
47 3h4p_a Proteasome subunit beta 20.0 48 0.0016 28.3 2.2 25 225-249 184-208 (219)
No 1
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=99.96 E-value=3.3e-29 Score=232.40 Aligned_cols=167 Identities=23% Similarity=0.253 Sum_probs=129.1
Q ss_pred CcccCCCCeEEEecCCCCCCCCCCCcEEEEcCCCCeecCccccccccCchhhHHHHHHHHHhCCCCceeEEec-cCC-cc
Q psy14077 1 ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICE-ETS-SN 78 (296)
Q Consensus 1 ~Rvp~~~~~flItPsG~~~~elt~~dlV~VDldG~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rpdv~aIvH-H~p-s~ 78 (296)
+|+|++++.|||||||+.|++|+++|||+||+||++++|..+ ..+||+|+.||++||++| ||++||+| |+| ++
T Consensus 60 ~R~~~~~~~flItPsG~~~~~lt~~dlv~vdldG~~v~g~~~---~~~psse~~iH~~Iy~~r--pdv~aVvHtHs~~a~ 134 (273)
T 3ocr_A 60 ARVPGPDEHFLINAFGLLFDEITASNLVKVDIDGTIVDDPTG---LGINYAGYVIHSAIHAAR--HDLQAVLHTHTRDGI 134 (273)
T ss_dssp EECSSSSCEEEECCTTCCGGGCCGGGCEEEETTCCEEECTTS---CCCCTTTTHHHHHHHHHC--TTCCEEEEECCHHHH
T ss_pred EEecCCCCEEEEeCCCCChhhCCccCEEEEeCCCCCccCCCC---CCCCChHHHHHHHHHHhC--CCCcEEEEcCChHHH
Confidence 488876789999999999999999999999999999998411 147899999999999995 99999999 888 55
Q ss_pred ccccccCCcceEecCCCCCCCCccccccccccccC---CCCHHHHHHHHHHhhCCCC-----cceeeechh--HHHHHHH
Q psy14077 79 LWVEANSDAEWVADGSPTHSSTPVKIDSALQFVPK---NTNPKEFKKLQQQIKENRR-----ADKITSGPQ--SQLLEGV 148 (296)
Q Consensus 79 ~~~sa~~dv~~ViH~~ptHs~taiaI~~~~~FvP~---~t~p~E~~~v~~aLge~na-----HGvltaG~s--eA~l~av 148 (296)
++......+..+ ...++.+.....+.|+ ..+.++...++++|+++++ ||++++|++ +||..++
T Consensus 135 a~s~~~~~l~p~-------~~~~~~~~g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~~~~G~tl~eA~~~~~ 207 (273)
T 3ocr_A 135 AVSAQKDGLLPI-------SQHSIAFSGRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGLLTGGVSVEHAIQQLH 207 (273)
T ss_dssp HHHTSTTCSCSC-------SHHHHTTTTTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred HHHHccCCCCCc-------cHHHHHhCCCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCceEEecCCHHHHHHHHH
Confidence 542221111111 1111222122333333 3466777889999998887 999999999 9999999
Q ss_pred HHHHHHHHHHHHHhcC-CCceeechhhHHHHH
Q psy14077 149 SWEEAKKLQDANQSAT-GDQVILVGAASKELK 179 (296)
Q Consensus 149 ~LEeaAki~l~A~s~G-~~~~~l~~~~~~~l~ 179 (296)
.||++|++++.++++| .+...|+.++++++.
T Consensus 208 ~lE~~a~i~l~a~~~G~~~~~~l~~~~~~~~~ 239 (273)
T 3ocr_A 208 ALEYACNIQIAAQSAGNAELVFPPREVIAKVE 239 (273)
T ss_dssp HHHHHHHHHHHHGGGCGGGCCCCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence 9999999999999998 466678888887774
No 2
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=99.95 E-value=7.2e-28 Score=215.37 Aligned_cols=161 Identities=13% Similarity=0.106 Sum_probs=123.0
Q ss_pred CcccCCCCeEEEecCCCCCCCCCCCcEEEEcCCCCeecCccccccccCchhhHHHHHHHHHhCCCCceeEEec-cCC-cc
Q psy14077 1 ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICE-ETS-SN 78 (296)
Q Consensus 1 ~Rvp~~~~~flItPsG~~~~elt~~dlV~VDldG~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rpdv~aIvH-H~p-s~ 78 (296)
+|++ +.|||||||+.|++|+++||++||+||++++|. .||+|+.||++|||+| ||++||+| |+| ++
T Consensus 32 ~R~~---~~~lItpsG~~~~~l~~~dlv~vd~~G~~~~g~-------~pSse~~lH~~iy~~r--pdv~aVvHtHs~~~~ 99 (215)
T 1e4c_P 32 VRYQ---DGMLITPTGIPYEKLTESHIVFIDGNGKHEEGK-------LPQSEWRFHMAAYQSR--PDANAVVHNHAVHCT 99 (215)
T ss_dssp EEET---TEEEECCTTCCGGGCCGGGCEEECTTCCBCTTC-------CCCTTHHHHHHHHHHC--TTCCEEEEECCHHHH
T ss_pred EEeC---CcEEEeCCCCCcccCCHHHEEEEcCCCCCCCCC-------CCChHHHHHHHHHHhC--CCCCEEEEcCcHHHH
Confidence 3664 469999999999999999999999999999986 3899999999999995 99999999 888 66
Q ss_pred ccccccCCcceEecCCCCCCCCccccc-cccccccC--CCCHHHHHHHHHHhhCCCC-----cceeeechh--HHHHHHH
Q psy14077 79 LWVEANSDAEWVADGSPTHSSTPVKID-SALQFVPK--NTNPKEFKKLQQQIKENRR-----ADKITSGPQ--SQLLEGV 148 (296)
Q Consensus 79 ~~~sa~~dv~~ViH~~ptHs~taiaI~-~~~~FvP~--~t~p~E~~~v~~aLge~na-----HGvltaG~s--eA~l~av 148 (296)
+|......+..+ + . ....+. ....++|+ ..+.+....++++|+++++ ||++++|++ +|+..++
T Consensus 100 a~s~~~~~l~~~-~-----~-~~~~~~~~~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~ 172 (215)
T 1e4c_P 100 AVSILNRSIPAI-H-----Y-MIAAAGGNSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGLIACEVNLEKALWLAH 172 (215)
T ss_dssp HHHHHTCCBCSS-S-----G-GGGGGTSSCBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHHH
T ss_pred HHHHhCCCCCcc-c-----H-HHHHhCCCCcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCcEEEeCCHHHHHHHHH
Confidence 553222222111 1 0 111111 12223333 1233445578999998877 999999999 9999999
Q ss_pred HHHHHHHHHHHHHhcCCCceeechhhHHHHHH
Q psy14077 149 SWEEAKKLQDANQSATGDQVILVGAASKELKS 180 (296)
Q Consensus 149 ~LEeaAki~l~A~s~G~~~~~l~~~~~~~l~~ 180 (296)
.+|++|++++.++++|++...|+.+++.++.+
T Consensus 173 ~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~~~ 204 (215)
T 1e4c_P 173 EVEVLAQLYLTTLAITDPVPVLSDEEIAVVLE 204 (215)
T ss_dssp HHHHHHHHHHHHHTTCSSCCCCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCHHHHHHHHH
Confidence 99999999999999998756789988888854
No 3
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=99.94 E-value=2e-26 Score=213.22 Aligned_cols=160 Identities=13% Similarity=0.099 Sum_probs=121.3
Q ss_pred CcccCCCCeEEEecCCCCCCCCCCCcEEEEcCCCCeecCccccccccCchhhHHHHHHHHHhCCCCceeEEec-cCC-cc
Q psy14077 1 ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICE-ETS-SN 78 (296)
Q Consensus 1 ~Rvp~~~~~flItPsG~~~~elt~~dlV~VDldG~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rpdv~aIvH-H~p-s~ 78 (296)
+|++++++.|||||+| .|++|+++|||+||+||+ ++|. ..||+|+.||++|||+| ||++|||| |+| ++
T Consensus 66 vR~~~~~~~~lItpsg-~~~~l~~~dlv~vd~dG~-~~g~------~~pSsE~~lH~~Iy~~r--pdv~aVvHtHs~~a~ 135 (270)
T 2z7b_A 66 ARDPEDPASFFLAQKL-APSLITVDDIQRFNLDGE-TSDN------RPSYLERYIHSEIYKTR--PDVQCVLHTHSPAVL 135 (270)
T ss_dssp EECTTCTTEEEEECSS-CGGGCCGGGEEEEETTSC-CSCC------SCCCTTHHHHHHHHHHC--TTCCEEEEECCTTTG
T ss_pred EEecCCCCEEEEeCCC-ChhhCCcccEEEECCCCC-cCCC------CCCChhHHHHHHHHHhC--CCCeEEEeeCCHHHH
Confidence 4788766899999998 689999999999999999 6654 36899999999999995 99999999 888 55
Q ss_pred ccccccCCcceEecCCCCCCCCccccccccccccC-----------CCCHHHHHHHHHHhhCCCC-----cceeeechh-
Q psy14077 79 LWVEANSDAEWVADGSPTHSSTPVKIDSALQFVPK-----------NTNPKEFKKLQQQIKENRR-----ADKITSGPQ- 141 (296)
Q Consensus 79 ~~~sa~~dv~~ViH~~ptHs~taiaI~~~~~FvP~-----------~t~p~E~~~v~~aLge~na-----HGvltaG~s- 141 (296)
+|......+..+.+ ....+.....++|+ ..++++...++++|++.++ ||++++|++
T Consensus 136 a~s~~~~~l~~~~~-------~~~~~g~~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~~~~G~tl 208 (270)
T 2z7b_A 136 PYCFVDTPLRPVTH-------MGAFIGESVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGVVNVGKSV 208 (270)
T ss_dssp GGGSSSSCCCCCSG-------GGGGGCSCCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEEEEEESSH
T ss_pred HHHhcCCCCCCccH-------HHHHhCCCCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCceEEEeCCH
Confidence 54322111111111 11111112222331 1245667789999998877 999999999
Q ss_pred -HHHHHHHHHHHHHHHHHHHHhcCCCceeechhhHHHH
Q psy14077 142 -SQLLEGVSWEEAKKLQDANQSATGDQVILVGAASKEL 178 (296)
Q Consensus 142 -eA~l~av~LEeaAki~l~A~s~G~~~~~l~~~~~~~l 178 (296)
+|+..++.+|++|++++.++++|++ ..|+.+++..+
T Consensus 209 ~eA~~~~~~lE~~a~i~l~a~~~G~~-~~l~~e~~~~~ 245 (270)
T 2z7b_A 209 REVVFRAFYLEQEAAALTAGLKIGNV-KYLSPGEIKTA 245 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCC-CCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCC-cCCCHHHHHHH
Confidence 9999999999999999999999876 56787777666
No 4
>1k0w_A L-ribulose 5 phosphate 4-epimerase; aldolase, isomerase; 2.10A {Escherichia coli} SCOP: c.74.1.1 PDB: 1jdi_A
Probab=99.93 E-value=4.6e-26 Score=205.55 Aligned_cols=162 Identities=12% Similarity=0.146 Sum_probs=115.0
Q ss_pred CcccCCCCeEEEecCCCCCCCCCCCcEEEEcCC-CCeecCccccccccCchhhHHHHHHHHHhCCCCceeEEec-cCC-c
Q psy14077 1 ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMR-GDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICE-ETS-S 77 (296)
Q Consensus 1 ~Rvp~~~~~flItPsG~~~~elt~~dlV~VDld-G~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rpdv~aIvH-H~p-s 77 (296)
+|+++ ++.|||||||+.|++|+++|||+||+| |++++|. ..||+|+.||++|||+| ||++||+| |+| +
T Consensus 31 ~R~~~-~~~~~ItpsG~~~~~l~~~dlv~vd~~~G~~v~g~------~~pSse~~lH~~iy~~r--pdv~aVvHtHs~~a 101 (231)
T 1k0w_A 31 AVDRE-RGVFVIKPSGVDYSIMTADDMVVVSIETGEVVEGA------KKPSSDTPTHRLLYQAF--PSIGGIVHTHSRHA 101 (231)
T ss_dssp EEETT-TTEEEECBSSCCTTTCCGGGCEEEETTTCCEEECS------SCBCTTHHHHHHHHHHC--TTCCEEEECCCHHH
T ss_pred EEeCC-CCEEEEeCCCCChhhCCHhHEEEEECCCCCCCCCC------CCCChhHHHHHHHHHhC--CCCCEEEEeCcHHH
Confidence 47764 589999999999999999999999999 9999986 25899999999999995 99999999 888 6
Q ss_pred cccccccCCcceEecCCCCCCCCcccccccccc----------ccCCCCHHHHHHHHHHhh-------CCCC-----cce
Q psy14077 78 NLWVEANSDAEWVADGSPTHSSTPVKIDSALQF----------VPKNTNPKEFKKLQQQIK-------ENRR-----ADK 135 (296)
Q Consensus 78 ~~~~sa~~dv~~ViH~~ptHs~taiaI~~~~~F----------vP~~t~p~E~~~v~~aLg-------e~na-----HGv 135 (296)
++|......+..+.+ .+ ...+.....+ +|+.. ....++++.++ +.++ ||+
T Consensus 102 ~a~s~~~~~l~~~~~---~~---~~~~~g~vp~~~~~~~~~i~~~y~~--~g~~~La~~~~~~~~~~l~~~avll~nHG~ 173 (231)
T 1k0w_A 102 TIWAQAGQSIPATGT---TH---ANYFYGTIPCTRKMTDAEINGEYEW--ETGNVIVETFEKQGIDAAQMPGVLVHSHGP 173 (231)
T ss_dssp HHHHHHTCCBCCCSH---HH---HTTCSSCBCBCCCCCHHHHHSSHHH--HHHHHHHHHHHHTTCCTTTCCEEEETTTEE
T ss_pred HHHHHhCCCCCCccH---HH---HHHhCCCceeeccccccccccCcCC--CChHHHHHHHHHhhhccccCCEEEEcCCCC
Confidence 665322212211101 00 0000011111 11111 11122333332 4554 999
Q ss_pred eeechh--HHHHHHHHHHHHHHHHHHHHhcCCCceeechhhHHHHH
Q psy14077 136 ITSGPQ--SQLLEGVSWEEAKKLQDANQSATGDQVILVGAASKELK 179 (296)
Q Consensus 136 ltaG~s--eA~l~av~LEeaAki~l~A~s~G~~~~~l~~~~~~~l~ 179 (296)
+++|++ +|+..++.+|++|++++.++++|+....|+.+.++++.
T Consensus 174 ~~~G~~~~eA~~~~~~lE~~a~~~~~a~~~g~~~~~l~~~~~~~~~ 219 (231)
T 1k0w_A 174 FAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQTLLNKHY 219 (231)
T ss_dssp EEEESSHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCCCHHHHHHHH
T ss_pred eEecCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCCHHHHHHHH
Confidence 999999 99999999999999999999998766677887777764
No 5
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=99.93 E-value=6.5e-26 Score=202.26 Aligned_cols=159 Identities=11% Similarity=0.165 Sum_probs=117.3
Q ss_pred CcccCCCCeEEEecCCCCCCCCCCCcEEEEcC-CCCeecCccccccccCchhhHHHHHHHHHhCCCCceeEEec-cCC-c
Q psy14077 1 ARLNVDEEIFLVNPHGLLYNEITASSLVKVDM-RGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICE-ETS-S 77 (296)
Q Consensus 1 ~Rvp~~~~~flItPsG~~~~elt~~dlV~VDl-dG~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rpdv~aIvH-H~p-s 77 (296)
+|+++ .|||||||+.|++|+++|||+||+ ||++++|. .||+|+.||++|||+ |||++||+| |+| +
T Consensus 32 ~R~~~---~~lItpsG~~~~~l~~~dlv~vd~~~G~~~~g~-------~pSse~~lH~~iy~~--rpdv~aVvHtHs~~~ 99 (212)
T 2opi_A 32 WRIGE---EALISGTGSWVPTLAKEKVSICNIASGTPTNGV-------KPSMESTFHLGVLRE--RPDVNVVLHFQSEYA 99 (212)
T ss_dssp EEETT---EEEEEBTTCCGGGCCGGGEEEEETTTCCBSSSC-------CBCTTHHHHHHHHHH--CTTCCEEEEECCHHH
T ss_pred EEeCC---eEEEeCCCCChhHCCCCcEEEEECCCCCCCCCC-------CCChhHHHHHHHHHh--CCCCCEEEEeCcHHH
Confidence 46653 599999999999999999999999 99999986 379999999999999 499999999 888 5
Q ss_pred cccccccCCcceEe-cCCCCCCCCccccccccccccC--CCCHHHHHHHHHHhhCCCC-----cceeeechh--HHHHHH
Q psy14077 78 NLWVEANSDAEWVA-DGSPTHSSTPVKIDSALQFVPK--NTNPKEFKKLQQQIKENRR-----ADKITSGPQ--SQLLEG 147 (296)
Q Consensus 78 ~~~~sa~~dv~~Vi-H~~ptHs~taiaI~~~~~FvP~--~t~p~E~~~v~~aLge~na-----HGvltaG~s--eA~l~a 147 (296)
++|....... .. ..+|. ....+.....++|+ ..+.++...++++|+++++ ||++++|++ +|+..+
T Consensus 100 ~a~s~~~~~~--~~~~~lp~---~~~~~g~~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~~~~G~t~~eA~~~~ 174 (212)
T 2opi_A 100 TAISCMKNKP--TNFNVTAE---IPCHVGSEIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQVVCGKDFDQVYERA 174 (212)
T ss_dssp HHHHHBSSCC--SCCCCSTH---HHHHTCSCCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEEEEEESSHHHHHHHH
T ss_pred HHHHhcCccc--cccccCch---HHHHhCCCeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCcEEEcCCHHHHHHHH
Confidence 5553221100 00 00110 01111112333343 2344556679999998877 999999999 999999
Q ss_pred HHHHHHHHHHHHHHhcCCCceeechhhHHHHH
Q psy14077 148 VSWEEAKKLQDANQSATGDQVILVGAASKELK 179 (296)
Q Consensus 148 v~LEeaAki~l~A~s~G~~~~~l~~~~~~~l~ 179 (296)
+.+|++|++++.+ .|.+ ..|+.+++..+.
T Consensus 175 ~~lE~~a~~~~~a--~g~~-~~l~~~~~~~~~ 203 (212)
T 2opi_A 175 TFFEMACRIIVQS--GGDY-SVLTPEEIEDLE 203 (212)
T ss_dssp HHHHHHHHHHHHT--TTCC-CCCCHHHHHHCC
T ss_pred HHHHHHHHHHHHh--cCCC-CCCCHHHHHHHH
Confidence 9999999999988 4544 468888877774
No 6
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=99.92 E-value=5.2e-25 Score=195.60 Aligned_cols=151 Identities=12% Similarity=0.122 Sum_probs=106.5
Q ss_pred CcccCCCCeEEEecCCCCCCCCCCCcEEEEcCCCCeecCccccccccCchhhHHHHHHHHHhCCCCceeEEec-cCC-cc
Q psy14077 1 ARLNVDEEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICE-ETS-SN 78 (296)
Q Consensus 1 ~Rvp~~~~~flItPsG~~~~elt~~dlV~VDldG~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rpdv~aIvH-H~p-s~ 78 (296)
+|+++ +.|||||||+.|++|+++|||+||+||+++ |+ ..||+|+.||++|||+| ||++||+| |+| ++
T Consensus 38 ~R~~~--~~~~ItpsG~~~~~l~~~dlv~vd~~g~~v-~~------~~pSse~~lH~~iy~~r--pdv~aVvHtHs~~a~ 106 (208)
T 2irp_A 38 AKVSE--EYIAITASGKHKGKLTPEDILLIDYEGRPV-GG------GKPSAETLLHTTVYKLF--PEVNAVVHTHSPNAT 106 (208)
T ss_dssp EECSS--SEEEEECTTSCGGGCCGGGEEEEETTSCBT-TS------CCCCHHHHHHHHHHHHC--TTCCEEEEECCHHHH
T ss_pred EEeCC--CEEEEecCCCCcccCCcccEEEEcCCCCCC-CC------CCCCccHHHHHHHHHhC--CCCCEEEecCCHHHH
Confidence 47663 689999999999999999999999999999 54 25899999999999995 99999999 888 66
Q ss_pred ccccccCC--cceEecCC-CCCCCCccccc---cccccccCCCCHHHH-HHHHHHhhCCC---C-----cceeeechh--
Q psy14077 79 LWVEANSD--AEWVADGS-PTHSSTPVKID---SALQFVPKNTNPKEF-KKLQQQIKENR---R-----ADKITSGPQ-- 141 (296)
Q Consensus 79 ~~~sa~~d--v~~ViH~~-ptHs~taiaI~---~~~~FvP~~t~p~E~-~~v~~aLge~n---a-----HGvltaG~s-- 141 (296)
+|...... +.+..... ....+ +... ....++|+.....++ ..++++|++.+ + ||++++|++
T Consensus 107 a~s~~~~~~~lp~~~~~~~~~~~g--~~~~~~~~~vp~~~~~~g~~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~ 184 (208)
T 2irp_A 107 VISIVEKKDFVELEDYELLKAFPD--IHTHEVKIKIPIFPNEQNIPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSME 184 (208)
T ss_dssp HHHHHCCSSEEECCCHHHHTTCTT--CCCSCSSCEEEEECCCSCHHHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHH
T ss_pred HHHhhcCCCCCCccHHHHHHHhCC--ccccccccceeeecCCCCHHHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHH
Confidence 55322211 11100000 00000 0000 012233332333444 46788887653 4 999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcC
Q psy14077 142 SQLLEGVSWEEAKKLQDANQSAT 164 (296)
Q Consensus 142 eA~l~av~LEeaAki~l~A~s~G 164 (296)
+|+..++.+|++|++++.+++.|
T Consensus 185 eA~~~~~~lE~~a~~~~~~~~~g 207 (208)
T 2irp_A 185 EALIHTEALEFIFECELKLLSFH 207 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 99999999999999999998765
No 7
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=99.91 E-value=4.9e-25 Score=204.10 Aligned_cols=164 Identities=13% Similarity=0.078 Sum_probs=119.7
Q ss_pred CeEEEecCCCCCCCC--CCCc---EEEEcCCCC---ee---cCccccccccCchhhHHHHHHHHHhCC---CCceeEEec
Q psy14077 8 EIFLVNPHGLLYNEI--TASS---LVKVDMRGD---II---EPVLGLWLSRVEALALAMVSCITRLQP---RPWSKWICE 73 (296)
Q Consensus 8 ~~flItPsG~~~~el--t~~d---lV~VDldG~---vv---eG~~~~~~~~~~ssE~~~H~aIYr~r~---rpdv~aIvH 73 (296)
+.|||||||+.|++| +|+| ||+||+||+ ++ +|+ ..||+|+.||++||++|. |||++||+|
T Consensus 68 ~~~lItpSG~~~~~l~~~p~d~~~iv~vd~dG~~~~~v~~~~~~------~~PSsE~~~H~~iy~~r~~~~rpd~~aVvH 141 (274)
T 2v9l_A 68 TPFIVTGSGKFFRNVQLDPAANLGIVKVDSDGAGYHILWGLTNE------AVPTSELPAHFLSHCERIKATNGKDRVIMH 141 (274)
T ss_dssp CEEEEEBTTCCGGGTTTCHHHHEEEEEECTTSSEEEEEEECTTT------CCBCTTHHHHHHHHHHHHHHTTTCCCEEEE
T ss_pred cEEEEeCCCCCHHHhcCCHhhCCcEEEEeCCCCeeeeeeccCCC------CCCCHHHHHHHHHHHhcccccCCCCeEEEE
Confidence 589999999999999 9999 999999999 66 554 258999999999999843 699999999
Q ss_pred -cCC-ccccccccCCcc--eE---ecCCCCCCCCccccccccccccC--CCCHHHHHHHHHHhhCCCC-----cceeeec
Q psy14077 74 -ETS-SNLWVEANSDAE--WV---ADGSPTHSSTPVKIDSALQFVPK--NTNPKEFKKLQQQIKENRR-----ADKITSG 139 (296)
Q Consensus 74 -H~p-s~~~~sa~~dv~--~V---iH~~ptHs~taiaI~~~~~FvP~--~t~p~E~~~v~~aLge~na-----HGvltaG 139 (296)
|+| ++++..... +. .+ .+.. . ......+.....++|+ ..+.+....++++|+++++ ||++++|
T Consensus 142 tHs~~~~a~s~~~~-l~~~~~~~~~~~~-~-~e~~~~~g~~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G 218 (274)
T 2v9l_A 142 CHATNLIALTYVLE-NDTAVFTRQLWEG-S-TECLVVFPDGVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGVFGSG 218 (274)
T ss_dssp ECCHHHHHHTTTSC-CCHHHHHHHHHHT-S-TTHHHHCTTCEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEEEEEE
T ss_pred CCcHHHHHHHccCc-cccccccchhhhc-c-hHHHHHcCCceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCceEec
Confidence 887 555422211 10 00 0000 0 0001111212334443 2334556679999998887 9999999
Q ss_pred hh--HHHHHHHHHHHHHHHHHHHHhcCCCceeechhhHHHHHH
Q psy14077 140 PQ--SQLLEGVSWEEAKKLQDANQSATGDQVILVGAASKELKS 180 (296)
Q Consensus 140 ~s--eA~l~av~LEeaAki~l~A~s~G~~~~~l~~~~~~~l~~ 180 (296)
++ +||..++.+|++|++++.+++.|++...|+.+++..+.+
T Consensus 219 ~~~~eA~~~~e~lE~~a~i~~~a~~~g~~~~~l~~e~~~~~~~ 261 (274)
T 2v9l_A 219 PTLDETFGLIDTAEKSAQVLVKVYSMGGMKQTISREELIALGK 261 (274)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTTSCSSCCCCC-HHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHH
Confidence 99 999999999999999999999987656788888888754
No 8
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=99.91 E-value=5.3e-25 Score=195.28 Aligned_cols=141 Identities=13% Similarity=0.127 Sum_probs=107.0
Q ss_pred CCeEEEecCCCCCCCCCCCcEEEEcCCCCeecCccccccccCchhhHHHHHHHHHhCCCCceeEEec-cCC-cccccccc
Q psy14077 7 EEIFLVNPHGLLYNEITASSLVKVDMRGDIIEPVLGLWLSRVEALALAMVSCITRLQPRPWSKWICE-ETS-SNLWVEAN 84 (296)
Q Consensus 7 ~~~flItPsG~~~~elt~~dlV~VDldG~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rpdv~aIvH-H~p-s~~~~sa~ 84 (296)
++.|||||||+.|++|+++||++||+||+++ + .||+|+.||++|||+ ||++||+| |+| +++|....
T Consensus 34 ~~~~lItpsG~~~~~l~~~dlv~vd~~G~~~-~--------~pSsE~~~H~~iy~~---pdv~aVvHtHs~~a~a~s~~~ 101 (200)
T 2fk5_A 34 KGGFLITKSGVQKARLTPEDLLEVPLEGPIP-E--------GASVESVVHREVYRR---TGARALVHAHPRVAVALSFHL 101 (200)
T ss_dssp SSEEEEEBTTCCGGGCCGGGEEEEESSSCCC-T--------TBCTTHHHHHHHHHH---SCCSEEEEECCHHHHHHHTTC
T ss_pred CCEEEEeCCCCCcccCCcccEEEEeCCCCCc-c--------CCChhHHHHHHHHhC---CCCCEEEecCCHHHHHHHhcC
Confidence 4789999999999999999999999999999 3 279999999999996 89999999 888 66553222
Q ss_pred CCcceEecCCCCCCCCccccccccccc-cC--CCCHHHHHHHHHHhhCCCC-----cceeeec------hh--HHHHHHH
Q psy14077 85 SDAEWVADGSPTHSSTPVKIDSALQFV-PK--NTNPKEFKKLQQQIKENRR-----ADKITSG------PQ--SQLLEGV 148 (296)
Q Consensus 85 ~dv~~ViH~~ptHs~taiaI~~~~~Fv-P~--~t~p~E~~~v~~aLge~na-----HGvltaG------~s--eA~l~av 148 (296)
..+..+ + .....+.....++ |+ ..+.++...++++|++.++ ||++++| ++ +|+..++
T Consensus 102 ~~l~~~-~------~~~~~~~~~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~ 174 (200)
T 2fk5_A 102 SRLRPL-D------LEGQHYLKEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMT 174 (200)
T ss_dssp SEECCS-S------HHHHHHTSCEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHH
T ss_pred CCCCCc-c------HHHHHhCCCceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHH
Confidence 111111 1 0111111122333 33 2344556679999998877 9999999 88 9999999
Q ss_pred HHHHHHHHHHHHHhcCCC
Q psy14077 149 SWEEAKKLQDANQSATGD 166 (296)
Q Consensus 149 ~LEeaAki~l~A~s~G~~ 166 (296)
.+|++|++++.+++.|++
T Consensus 175 ~lE~~a~~~~~a~~~g~~ 192 (200)
T 2fk5_A 175 TLEESAQILLYHRLWQGA 192 (200)
T ss_dssp HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCC
Confidence 999999999999987754
No 9
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=99.91 E-value=3.8e-25 Score=200.49 Aligned_cols=157 Identities=10% Similarity=-0.015 Sum_probs=110.4
Q ss_pred eEEEecCCCCCCCCC--CCcEEEEcCC----CCeecCccccccccCchhhHHHHHHHHHhC--CCCceeEEec-cCC-cc
Q psy14077 9 IFLVNPHGLLYNEIT--ASSLVKVDMR----GDIIEPVLGLWLSRVEALALAMVSCITRLQ--PRPWSKWICE-ETS-SN 78 (296)
Q Consensus 9 ~flItPsG~~~~elt--~~dlV~VDld----G~vveG~~~~~~~~~~ssE~~~H~aIYr~r--~rpdv~aIvH-H~p-s~ 78 (296)
.|||||||+.|++|+ ++||++|++| |++++|. + .||+|+.||++|||+| .|||++||+| |+| ++
T Consensus 59 ~~lItpsG~~~~~l~~p~~dl~~v~~d~~~~g~~v~g~-~-----~PSsE~~~H~~iy~~~~~~rpd~~aVvHtHs~~~~ 132 (238)
T 1pvt_A 59 YLLITATGSRMREVYEDDSKICLLHVLPGKHYEILHGN-G-----KPTSEFPTHLMIHAKFKEMNPEKKAIVHTHPLNLL 132 (238)
T ss_dssp EEEEEBTTCCHHHHTTCGGGEEEEEECSEEEEEEEECS-S-----CBCTTHHHHHHHHHHHHHSCTTCCEEEEECCHHHH
T ss_pred EEEEcCCCCCHHhccCCcccEEEEEecCCCCcceeCCC-C-----CCChHHHHHHHHHHhhhccCCCceEEEecCcHHHH
Confidence 899999999999999 8998888777 6788876 2 5899999999999963 4799999999 887 55
Q ss_pred ccccccCCcceEecCCCCCCC-CccccccccccccC--CCCHHHHHHHHHHhhCCCC-----cceeeechh--HHHHHHH
Q psy14077 79 LWVEANSDAEWVADGSPTHSS-TPVKIDSALQFVPK--NTNPKEFKKLQQQIKENRR-----ADKITSGPQ--SQLLEGV 148 (296)
Q Consensus 79 ~~~sa~~dv~~ViH~~ptHs~-taiaI~~~~~FvP~--~t~p~E~~~v~~aLge~na-----HGvltaG~s--eA~l~av 148 (296)
++... .++..+...++.... ..+.+.....++|+ ..+.++...++++|+++++ ||++++|++ +|+..++
T Consensus 133 a~s~~-~~l~~~~~~l~~~~~~~~~~~~~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~eA~~~~~ 211 (238)
T 1pvt_A 133 TLMNL-EEFQELLPKMMKIHPEVLIFFPQGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGVVAFGKDVAEAYDRVE 211 (238)
T ss_dssp HHTTS-GGGTTTHHHHTTSSHHHHHHCSSCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCEEEEESSHHHHHHHHH
T ss_pred HHHhc-ccchhhhccccccchHHHHHhCCCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCceEecCCHHHHHHHHH
Confidence 54211 111101000010000 11111122333443 2344556679999998887 999999999 9999999
Q ss_pred HHHHHHHHHHHHHhcCCCceeech
Q psy14077 149 SWEEAKKLQDANQSATGDQVILVG 172 (296)
Q Consensus 149 ~LEeaAki~l~A~s~G~~~~~l~~ 172 (296)
.+|++|++++.+++.|++...|+.
T Consensus 212 ~lE~~a~~~~~a~~~g~~~~~l~~ 235 (238)
T 1pvt_A 212 ILEKAAEILLRVLSLGRNPTGVPE 235 (238)
T ss_dssp HHHHHHHHHHHHHTTTCSCCC---
T ss_pred HHHHHHHHHHHHHHcCCCCCCCCc
Confidence 999999999999999876555554
No 10
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=99.86 E-value=3.2e-23 Score=186.75 Aligned_cols=134 Identities=8% Similarity=0.087 Sum_probs=96.9
Q ss_pred CeEEEecCCCCCCCCCCCcEEEEcCC---------------------CCeecCccccccccCchhhHHHHHHHHHhCCCC
Q psy14077 8 EIFLVNPHGLLYNEITASSLVKVDMR---------------------GDIIEPVLGLWLSRVEALALAMVSCITRLQPRP 66 (296)
Q Consensus 8 ~~flItPsG~~~~elt~~dlV~VDld---------------------G~vveG~~~~~~~~~~ssE~~~H~aIYr~r~rp 66 (296)
+.|||||||+.|++|+++|||+||+| |++++|. + ..||+|+.||++||+
T Consensus 56 ~~~~ItpSG~~~~~l~~~dlv~vdl~~l~~~~~~~~~~~~~~~~~~~g~~v~~~-~----~~pSsE~~lH~~iy~----- 125 (222)
T 3m4r_A 56 SVLRVKNSGSNLGTIDSRGFTGIRMDDALAAAKIDKMTDEAMVDYLKKSMVNPS-E----PSPSVETFLHAFLPY----- 125 (222)
T ss_dssp EEEEEEBTTSCGGGCCGGGEEEEEHHHHHHGGGCSCCCHHHHHHHHHHTBSSTT-S----CCBCTTHHHHHTSCS-----
T ss_pred CEEEEeCCCCChhhCCHHHeEEEchhhhccccccccccchhhccccCCccccCC-C----CCcchhHHHHHHHHh-----
Confidence 78999999999999999999999999 8999876 2 368999999999998
Q ss_pred ceeEEec-cCC-ccccccccCCcceEecCCCCCCCCccccccccccccCCC-CHHHHHHHHHHhhCC-CC-----cceee
Q psy14077 67 WSKWICE-ETS-SNLWVEANSDAEWVADGSPTHSSTPVKIDSALQFVPKNT-NPKEFKKLQQQIKEN-RR-----ADKIT 137 (296)
Q Consensus 67 dv~aIvH-H~p-s~~~~sa~~dv~~ViH~~ptHs~taiaI~~~~~FvP~~t-~p~E~~~v~~aLge~-na-----HGvlt 137 (296)
+|||| |+| ++++......+.. ....+.. ..++|+.. ..++...+++.|++. ++ ||+++
T Consensus 126 --~aVvHtHs~~a~a~s~~~~~l~~----------~~~~~g~-v~~~~y~~~g~ela~~i~~~l~~~~~avlL~nHG~~~ 192 (222)
T 3m4r_A 126 --KFVMHSHADAILSITNTDLPSDQ----------IAKILGN-VVVLPYIPPGFTLAKEVMNCFKKGIDGIVLRKHGLLT 192 (222)
T ss_dssp --SEEEEECCHHHHHHHTSSCCHHH----------HHHHHCS-EEEECCCCSSHHHHHHHHHHCCTTCSEEEETTTEEEE
T ss_pred --CEEEEeCCHHHHHHHhCCCcHHH----------HHHHhCC-ceecCCcCCcHHHHHHHHHHHhcCCCEEEECCCCCEE
Confidence 39999 887 5554222111110 0001111 33344321 124556788999875 55 99999
Q ss_pred echh--HHHHHHHHHHHHHHHHHHHHhcC
Q psy14077 138 SGPQ--SQLLEGVSWEEAKKLQDANQSAT 164 (296)
Q Consensus 138 aG~s--eA~l~av~LEeaAki~l~A~s~G 164 (296)
+|++ +||..++.+|++|++++.++++|
T Consensus 193 ~G~t~~eA~~~~~~lE~~a~~~l~a~~~G 221 (222)
T 3m4r_A 193 FGDTGKEAYDRHINIVSRAENFIREKTDG 221 (222)
T ss_dssp EESSHHHHHHHHHHHHHHHHHHHC-----
T ss_pred ECCCHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 9999 99999999999999999998766
No 11
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=54.79 E-value=71 Score=28.89 Aligned_cols=32 Identities=16% Similarity=0.161 Sum_probs=24.4
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-++..||++++|.+ |...
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~ 61 (306)
T 1o5k_A 29 ELDLESYERLVRYQLENGVNALIVLGTTGESPT 61 (306)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchhh
Confidence 3555667788888778888999999999 5443
No 12
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=44.71 E-value=89 Score=28.40 Aligned_cols=105 Identities=14% Similarity=0.104 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHH-HHHHHHHHHHHHHHhcCCCce-eechhhHHHHHHHHHHhhhccc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEG-VSWEEAKKLQDANQSATGDQV-ILVGAASKELKSLAKKLQDANQ 190 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~a-v~LEeaAki~l~A~s~G~~~~-~l~~~~~~~l~~~~~~~~~~~~ 190 (296)
..|.+.+.++.+.+-++..+|++++|.+ |..... ..-.+..+....+. .|..++ .=.+......+++-|...+++-
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~-~grvpViaGvg~~t~~ai~la~~A~~~Ga 107 (316)
T 3e96_A 29 SIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYV-HGRALVVAGIGYATSTAIELGNAAKAAGA 107 (316)
T ss_dssp CBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHH-TTSSEEEEEECSSHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHh-CCCCcEEEEeCcCHHHHHHHHHHHHhcCC
Confidence 4566777788888888888999999998 544432 22222222222222 233222 2233355555555554444322
Q ss_pred CCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 191 SATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 191 ~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
|-++ +. +| .|++.|+++|-+|-+.|-..-
T Consensus 108 ----davl-------------------v~-~P----~y~~~s~~~l~~~f~~va~a~ 136 (316)
T 3e96_A 108 ----DAVM-------------------IH-MP----IHPYVTAGGVYAYFRDIIEAL 136 (316)
T ss_dssp ----SEEE-------------------EC-CC----CCSCCCHHHHHHHHHHHHHHH
T ss_pred ----CEEE-------------------Ec-CC----CCCCCCHHHHHHHHHHHHHhC
Confidence 2221 11 22 245569999999999887653
No 13
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=41.01 E-value=1.6e+02 Score=26.28 Aligned_cols=31 Identities=10% Similarity=0.092 Sum_probs=24.1
Q ss_pred CCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 115 TNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 115 t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
.|.+.+.++.+.+-++..||++.+|.+ |...
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~ 49 (294)
T 2ehh_A 18 VDYEALGNLIEFHVDNGTDAILVCGTTGESPT 49 (294)
T ss_dssp ECHHHHHHHHHHHHTTTCCEEEESSTTTTGGG
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhh
Confidence 555667788888878888999999998 5443
No 14
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=40.94 E-value=1.4e+02 Score=27.16 Aligned_cols=105 Identities=8% Similarity=0.087 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHH-HHHHHHHHHHHHHHhcCCCce-ee-chhhHHHHHHHHHHhhhcc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEG-VSWEEAKKLQDANQSATGDQV-IL-VGAASKELKSLAKKLQDAN 189 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~a-v~LEeaAki~l~A~s~G~~~~-~l-~~~~~~~l~~~~~~~~~~~ 189 (296)
..|.+.+.++.+.+-++..+|++++|.+ |..... ..-.+..+....+. .|..++ .= .+......+++-|...+++
T Consensus 41 ~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~-~grvpViaGvg~~~t~~ai~la~~A~~~G 119 (315)
T 3na8_A 41 GLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTV-AHRVPTIVSVSDLTTAKTVRRAQFAESLG 119 (315)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHH-TTSSCBEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHh-CCCCcEEEecCCCCHHHHHHHHHHHHhcC
Confidence 4666677788888878888999999998 544332 11222222222221 233222 11 2234455555544444432
Q ss_pred cCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 190 QSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 190 ~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
- |-++++ |-.|++.|+++|-+|-+.|-..-
T Consensus 120 a----davlv~------------------------~P~y~~~s~~~l~~~f~~va~a~ 149 (315)
T 3na8_A 120 A----EAVMVL------------------------PISYWKLNEAEVFQHYRAVGEAI 149 (315)
T ss_dssp C----SEEEEC------------------------CCCSSCCCHHHHHHHHHHHHHHC
T ss_pred C----CEEEEC------------------------CCCCCCCCHHHHHHHHHHHHHhC
Confidence 1 222211 22345679999999999887653
No 15
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=40.81 E-value=1.6e+02 Score=26.21 Aligned_cols=105 Identities=11% Similarity=0.050 Sum_probs=57.5
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHH-HHHHHHHHHHHHHHHhcCCCcee--echhhHHHHHHHHHHhhhcc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLE-GVSWEEAKKLQDANQSATGDQVI--LVGAASKELKSLAKKLQDAN 189 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~-av~LEeaAki~l~A~s~G~~~~~--l~~~~~~~l~~~~~~~~~~~ 189 (296)
..|.+.+.++.+.+-++..||++..|.+ |.... ...-.+..+....+. .|..++. ..+......+++-+...+.+
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~-~grvpviaGvg~~~t~~ai~la~~a~~~G 97 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLV-DKRVPVIAGTGTNDTEKSIQASIQAKALG 97 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHH-TTSSCEEEECCCSCHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHh-CCCCcEEEeCCcccHHHHHHHHHHHHHcC
Confidence 3555667788888778888999999999 54432 111122222222222 2332221 12334555555555444432
Q ss_pred cCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 190 QSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 190 ~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
.|-++++ |-.|++.|+++|-+|-+.|-..-
T Consensus 98 ----adavlv~------------------------~P~y~~~~~~~l~~~f~~ia~a~ 127 (292)
T 3daq_A 98 ----ADAIMLI------------------------TPYYNKTNQRGLVKHFEAIADAV 127 (292)
T ss_dssp ----CSEEEEE------------------------CCCSSCCCHHHHHHHHHHHHHHH
T ss_pred ----CCEEEEC------------------------CCCCCCCCHHHHHHHHHHHHHhC
Confidence 1222211 22355679999999999887653
No 16
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=40.64 E-value=1.5e+02 Score=26.62 Aligned_cols=32 Identities=16% Similarity=0.171 Sum_probs=24.8
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-++..||++++|.+ |...
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~ 61 (301)
T 1xky_A 29 NIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPT 61 (301)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhh
Confidence 4566667788888878888999999998 5443
No 17
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=40.05 E-value=1.7e+02 Score=26.25 Aligned_cols=104 Identities=15% Similarity=0.126 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHHHHHHHHHHHHHHHH-h-cCCCce-e-echhhHHHHHHHHHHhhhc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEGVSWEEAKKLQDANQ-S-ATGDQV-I-LVGAASKELKSLAKKLQDA 188 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~av~LEeaAki~l~A~-s-~G~~~~-~-l~~~~~~~l~~~~~~~~~~ 188 (296)
..|.+.+.+..+.+-++..||++.+|.+ |..... .||-.++...+. . .|..++ . ..+......+++-|...++
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls--~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~ 101 (297)
T 3flu_A 24 SIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLS--VEEHTAVIEAVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKA 101 (297)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSC--HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCC--HHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHc
Confidence 4566677788888878888999999999 544332 223233322221 1 233222 1 1223455555554444443
Q ss_pred ccCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 189 NQSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 189 ~~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
+- |-++++ |-.|++.|+++|-+|-+.|-..-
T Consensus 102 Ga----davlv~------------------------~P~y~~~~~~~l~~~f~~va~a~ 132 (297)
T 3flu_A 102 GA----DYTLSV------------------------VPYYNKPSQEGIYQHFKTIAEAT 132 (297)
T ss_dssp TC----SEEEEE------------------------CCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CC----CEEEEC------------------------CCCCCCCCHHHHHHHHHHHHHhC
Confidence 21 222211 22355679999999999887654
No 18
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=37.26 E-value=1.8e+02 Score=26.39 Aligned_cols=104 Identities=16% Similarity=0.135 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHHHHHHHHHHHHHHHH-h-cCCCce-ee-chhhHHHHHHHHHHhhhc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEGVSWEEAKKLQDANQ-S-ATGDQV-IL-VGAASKELKSLAKKLQDA 188 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~av~LEeaAki~l~A~-s-~G~~~~-~l-~~~~~~~l~~~~~~~~~~ 188 (296)
..|.+.+.++.+.+-++..||++++|.+ |..... .||-.++...+. . .|..++ .= .+......+++-|...++
T Consensus 39 ~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls--~~Er~~v~~~~v~~~~grvpViaGvg~~st~~ai~la~~A~~~ 116 (315)
T 3si9_A 39 AIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLT--HEEHKRIIELCVEQVAKRVPVVAGAGSNSTSEAVELAKHAEKA 116 (315)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSC--HHHHHHHHHHHHHHHTTSSCBEEECCCSSHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccCccccC--HHHHHHHHHHHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhc
Confidence 4666777788888878888999999998 444332 222222222221 1 232222 11 223455555554544443
Q ss_pred ccCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 189 NQSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 189 ~~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
+- |-++++ |-.|++.|+++|-+|-+.|-..-
T Consensus 117 Ga----davlv~------------------------~P~y~~~~~~~l~~~f~~va~a~ 147 (315)
T 3si9_A 117 GA----DAVLVV------------------------TPYYNRPNQRGLYTHFSSIAKAI 147 (315)
T ss_dssp TC----SEEEEE------------------------CCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CC----CEEEEC------------------------CCCCCCCCHHHHHHHHHHHHHcC
Confidence 21 222211 22345679999999999887654
No 19
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=37.19 E-value=1.6e+02 Score=26.45 Aligned_cols=32 Identities=9% Similarity=0.128 Sum_probs=24.7
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-++..+|++++|.+ |...
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~ 60 (303)
T 2wkj_A 28 ALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFV 60 (303)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECeeccChhh
Confidence 4566667788888878888999999998 5443
No 20
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=36.58 E-value=1.6e+02 Score=26.54 Aligned_cols=31 Identities=3% Similarity=0.071 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQL 144 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~ 144 (296)
..|.+.+.++.+.+-++..||++++|.+ |..
T Consensus 33 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~ 64 (304)
T 3cpr_A 33 DIDIAAGREVAAYLVDKGLDSLVLAGTTGESP 64 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCCEEEESSTTTTTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChh
Confidence 4566667788888878888999999998 444
No 21
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=36.39 E-value=1.8e+02 Score=26.02 Aligned_cols=32 Identities=9% Similarity=0.070 Sum_probs=24.4
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-++..||++++|.+ |...
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~ 49 (297)
T 2rfg_A 17 QVDEKALAGLVDWQIKHGAHGLVPVGTTGESPT 49 (297)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEECSSGGGTGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhh
Confidence 3555667788888777888999999998 5443
No 22
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=35.34 E-value=1.9e+02 Score=25.75 Aligned_cols=31 Identities=10% Similarity=0.068 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 115 TNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 115 t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
.|.+.+.++.+.+-++..||++.+|.+ |...
T Consensus 18 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~ 49 (289)
T 2yxg_A 18 VDFDGLEENINFLIENGVSGIVAVGTTGESPT 49 (289)
T ss_dssp ECHHHHHHHHHHHHHTTCSEEEESSTTTTGGG
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhh
Confidence 555667788888777888999999998 4443
No 23
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=35.33 E-value=1.4e+02 Score=27.12 Aligned_cols=105 Identities=13% Similarity=0.053 Sum_probs=56.5
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHH-HHHHHHHHHHHHHHHhcCCCce-eechhhHHHHHHHHHHhhhccc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLE-GVSWEEAKKLQDANQSATGDQV-ILVGAASKELKSLAKKLQDANQ 190 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~-av~LEeaAki~l~A~s~G~~~~-~l~~~~~~~l~~~~~~~~~~~~ 190 (296)
..|.+.+.++.+.+-++..||++++|.+ |.... ...-.+..+....+. .|..++ .=.+......+++-+...+++
T Consensus 29 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~-~grvpViaGvg~st~~ai~la~~A~~~G- 106 (314)
T 3d0c_A 29 EIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELV-NGRATVVAGIGYSVDTAIELGKSAIDSG- 106 (314)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHH-TTSSEEEEEECSSHHHHHHHHHHHHHTT-
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHh-CCCCeEEecCCcCHHHHHHHHHHHHHcC-
Confidence 4566667788888878888999999998 44432 222222222222221 233222 112224455555544444332
Q ss_pred CCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 191 SATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 191 ~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
.|-++++ |--|++.|+++|-+|-+.|-..-
T Consensus 107 ---adavlv~------------------------~P~y~~~s~~~l~~~f~~va~a~ 136 (314)
T 3d0c_A 107 ---ADCVMIH------------------------QPVHPYITDAGAVEYYRNIIEAL 136 (314)
T ss_dssp ---CSEEEEC------------------------CCCCSCCCHHHHHHHHHHHHHHS
T ss_pred ---CCEEEEC------------------------CCCCCCCCHHHHHHHHHHHHHhC
Confidence 1222111 22355668999999999887653
No 24
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=35.15 E-value=1.1e+02 Score=27.60 Aligned_cols=103 Identities=18% Similarity=0.151 Sum_probs=56.3
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHHHHHHHHHHHHHHHH-hcCCCceee--chhhHHHHHHHHHHhhhcc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEGVSWEEAKKLQDANQ-SATGDQVIL--VGAASKELKSLAKKLQDAN 189 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~av~LEeaAki~l~A~-s~G~~~~~l--~~~~~~~l~~~~~~~~~~~ 189 (296)
..|.+.+.++.+.+-++..+|++++|.+ |...... ||-.++...+. ..|..++.. .+......+++-+...+++
T Consensus 25 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~--~Er~~v~~~~v~~~grvpViaGvg~~~t~~ai~la~~A~~~G 102 (313)
T 3dz1_A 25 KIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDA--AEAEAVATRFIKRAKSMQVIVGVSAPGFAAMRRLARLSMDAG 102 (313)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCH--HHHHHHHHHHHHHCTTSEEEEECCCSSHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCH--HHHHHHHHHHHHHcCCCcEEEecCCCCHHHHHHHHHHHHHcC
Confidence 4566777788888878888999999999 5444322 22222222221 223322211 2234444455444443332
Q ss_pred cCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 190 QSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 190 ~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
- |-++ -.+ ||...|+++|-+|-+.|-..-
T Consensus 103 a----davl--------------------v~~-----P~~~~s~~~l~~~f~~va~a~ 131 (313)
T 3dz1_A 103 A----AGVM--------------------IAP-----PPSLRTDEQITTYFRQATEAI 131 (313)
T ss_dssp C----SEEE--------------------ECC-----CTTCCSHHHHHHHHHHHHHHH
T ss_pred C----CEEE--------------------ECC-----CCCCCCHHHHHHHHHHHHHhC
Confidence 1 1111 112 334469999999999997665
No 25
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=34.96 E-value=1.6e+02 Score=26.18 Aligned_cols=32 Identities=16% Similarity=0.141 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-++..||++.+|.+ |...
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~ 50 (292)
T 2ojp_A 18 NVCRASLKKLIDYHVASGTSAIVSVGTTGESAT 50 (292)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhh
Confidence 4566667788887777788999999998 4443
No 26
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=34.96 E-value=1.8e+02 Score=26.06 Aligned_cols=104 Identities=16% Similarity=0.168 Sum_probs=57.3
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHHHHHHHHHHHHHHHH-h-cC-CCce-ee-chhhHHHHHHHHHHhhh
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEGVSWEEAKKLQDANQ-S-AT-GDQV-IL-VGAASKELKSLAKKLQD 187 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~av~LEeaAki~l~A~-s-~G-~~~~-~l-~~~~~~~l~~~~~~~~~ 187 (296)
..|.+.+.++.+.+-++..||++.+|.+ |..... .||-.++...+. . .| ..++ .= .+......+++-|...+
T Consensus 24 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls--~~Er~~v~~~~~~~~~g~rvpviaGvg~~~t~~ai~la~~a~~ 101 (301)
T 3m5v_A 24 KVDEQSYARLIKRQIENGIDAVVPVGTTGESATLT--HEEHRTCIEIAVETCKGTKVKVLAGAGSNATHEAVGLAKFAKE 101 (301)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSC--HHHHHHHHHHHHHHHTTSSCEEEEECCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECccccChhhCC--HHHHHHHHHHHHHHhCCCCCeEEEeCCCCCHHHHHHHHHHHHH
Confidence 4566667788888878888999999998 544332 222222222221 1 23 2222 11 22345555555444444
Q ss_pred cccCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 188 ANQSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 188 ~~~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
.+- |-++++ |-.|++.|+++|-+|-+.|-..-
T Consensus 102 ~Ga----davlv~------------------------~P~y~~~s~~~l~~~f~~va~a~ 133 (301)
T 3m5v_A 102 HGA----DGILSV------------------------APYYNKPTQQGLYEHYKAIAQSV 133 (301)
T ss_dssp TTC----SEEEEE------------------------CCCSSCCCHHHHHHHHHHHHHHC
T ss_pred cCC----CEEEEc------------------------CCCCCCCCHHHHHHHHHHHHHhC
Confidence 321 222211 22345669999999999887653
No 27
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=34.23 E-value=2.1e+02 Score=25.43 Aligned_cols=31 Identities=10% Similarity=0.082 Sum_probs=24.0
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQL 144 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~ 144 (296)
..|.+.+.++.+.+-++..||++.+|.+ |..
T Consensus 17 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~ 48 (292)
T 2vc6_A 17 RIDEVALHDLVEWQIEEGSFGLVPCGTTGESP 48 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCSEEETTSGGGTGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChh
Confidence 3555667788888878888999999998 444
No 28
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=34.12 E-value=1.9e+02 Score=25.95 Aligned_cols=104 Identities=13% Similarity=0.108 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHHHHHHHHHHHHHHHH-h-cCCCcee--echhhHHHHHHHHHHhhhc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEGVSWEEAKKLQDANQ-S-ATGDQVI--LVGAASKELKSLAKKLQDA 188 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~av~LEeaAki~l~A~-s-~G~~~~~--l~~~~~~~l~~~~~~~~~~ 188 (296)
..|.+.+.++.+.+-++..||++.+|.+ |..... .||-.++...+. . .|..++. ..+......+++-+...++
T Consensus 32 ~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt--~~Er~~v~~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~ 109 (304)
T 3l21_A 32 SLDTATAARLANHLVDQGCDGLVVSGTTGESPTTT--DGEKIELLRAVLEAVGDRARVIAGAGTYDTAHSIRLAKACAAE 109 (304)
T ss_dssp CBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSC--HHHHHHHHHHHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCC--HHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHHc
Confidence 4666777788888878888999999999 544332 222222222221 1 2322221 1233445555554444443
Q ss_pred ccCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 189 NQSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 189 ~~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
+- |-++++ |-.|++.|+++|-+|-+.|-..-
T Consensus 110 Ga----davlv~------------------------~P~y~~~s~~~l~~~f~~va~a~ 140 (304)
T 3l21_A 110 GA----HGLLVV------------------------TPYYSKPPQRGLQAHFTAVADAT 140 (304)
T ss_dssp TC----SEEEEE------------------------CCCSSCCCHHHHHHHHHHHHTSC
T ss_pred CC----CEEEEC------------------------CCCCCCCCHHHHHHHHHHHHHhc
Confidence 21 222211 22345669999999999887654
No 29
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=34.06 E-value=2.1e+02 Score=25.40 Aligned_cols=32 Identities=9% Similarity=0.229 Sum_probs=24.3
Q ss_pred CCCHHHHHHHHHHhhC-CCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKE-NRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge-~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-+ +..||++++|.+ |...
T Consensus 20 ~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~ 53 (293)
T 1f6k_A 20 TINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFM 53 (293)
T ss_dssp CBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGG
T ss_pred CcCHHHHHHHHHHHHhhCCCcEEEeCccccchhh
Confidence 4566667788887777 788999999998 5443
No 30
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=33.88 E-value=1.5e+02 Score=26.66 Aligned_cols=105 Identities=11% Similarity=0.143 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHH-HHHHHHHHHHHHHHhcCCCce-e-echhhHHHHHHHHHHhhhcc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEG-VSWEEAKKLQDANQSATGDQV-I-LVGAASKELKSLAKKLQDAN 189 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~a-v~LEeaAki~l~A~s~G~~~~-~-l~~~~~~~l~~~~~~~~~~~ 189 (296)
..|.+.+.++.+.+-++..+|++++|.+ |..... ..-.+..+....+. .|..++ . ..+......+++-+...+++
T Consensus 21 ~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~-~grvpviaGvg~~~t~~ai~la~~a~~~G 99 (300)
T 3eb2_A 21 RVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAA-QRRVPVVAGVASTSVADAVAQAKLYEKLG 99 (300)
T ss_dssp CBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHH-TTSSCBEEEEEESSHHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHh-CCCCcEEEeCCCCCHHHHHHHHHHHHHcC
Confidence 4566677788888878888999999998 544332 11122222222221 233222 1 12334555565555444432
Q ss_pred cCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 190 QSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 190 ~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
- |-++++ |-.|++.|+++|-+|-+.|-..-
T Consensus 100 a----davlv~------------------------~P~y~~~~~~~l~~~f~~va~a~ 129 (300)
T 3eb2_A 100 A----DGILAI------------------------LEAYFPLKDAQIESYFRAIADAV 129 (300)
T ss_dssp C----SEEEEE------------------------ECCSSCCCHHHHHHHHHHHHHHC
T ss_pred C----CEEEEc------------------------CCCCCCCCHHHHHHHHHHHHHHC
Confidence 1 222222 22345679999999999887653
No 31
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=33.31 E-value=1.9e+02 Score=25.75 Aligned_cols=104 Identities=15% Similarity=0.140 Sum_probs=57.8
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHHHHHHHHHHHHHHHHh--cCCCce-ee-chhhHHHHHHHHHHhhhc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEGVSWEEAKKLQDANQS--ATGDQV-IL-VGAASKELKSLAKKLQDA 188 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~av~LEeaAki~l~A~s--~G~~~~-~l-~~~~~~~l~~~~~~~~~~ 188 (296)
..|.+.+.+..+.+-++..||++.+|.+ |.... ..||-.++...+.. .|..++ .= .+......+++-|...++
T Consensus 18 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~L--s~~Er~~v~~~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~ 95 (291)
T 3tak_A 18 GVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTL--SMEEHTQVIKEIIRVANKRIPIIAGTGANSTREAIELTKAAKDL 95 (291)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGS--CHHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHCCCCEEEECccccccccC--CHHHHHHHHHHHHHHhCCCCeEEEeCCCCCHHHHHHHHHHHHhc
Confidence 4566667788888777888999999999 54332 22333333322221 233222 11 223455555554444443
Q ss_pred ccCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 189 NQSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 189 ~~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
+- |-++++ |-.|++.|+++|-+|-+.|-..-
T Consensus 96 Ga----davlv~------------------------~P~y~~~~~~~l~~~f~~ia~a~ 126 (291)
T 3tak_A 96 GA----DAALLV------------------------TPYYNKPTQEGLYQHYKAIAEAV 126 (291)
T ss_dssp TC----SEEEEE------------------------CCCSSCCCHHHHHHHHHHHHHHC
T ss_pred CC----CEEEEc------------------------CCCCCCCCHHHHHHHHHHHHHhc
Confidence 21 222211 22355679999999999887654
No 32
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=33.18 E-value=2.3e+02 Score=26.08 Aligned_cols=32 Identities=6% Similarity=-0.066 Sum_probs=24.7
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-++..||++++|.+ |...
T Consensus 48 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~ 80 (343)
T 2v9d_A 48 QLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQ 80 (343)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccccChhh
Confidence 4566667788888878888999999998 5443
No 33
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=33.11 E-value=2e+02 Score=26.04 Aligned_cols=104 Identities=12% Similarity=0.074 Sum_probs=56.9
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHHHHHHHHHHHHHHHH-h-cCCCce-ee-chhhHHHHHHHHHHhhhc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEGVSWEEAKKLQDANQ-S-ATGDQV-IL-VGAASKELKSLAKKLQDA 188 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~av~LEeaAki~l~A~-s-~G~~~~-~l-~~~~~~~l~~~~~~~~~~ 188 (296)
..|.+.+.++.+.+-++..+|++.+|.+ |..... .||-.++...+. . .|..++ .= .+......+++-|...++
T Consensus 40 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls--~~Er~~v~~~~v~~~~grvpViaGvg~~st~eai~la~~A~~~ 117 (314)
T 3qze_A 40 RLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLD--VEEHIQVIRRVVDQVKGRIPVIAGTGANSTREAVALTEAAKSG 117 (314)
T ss_dssp CBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCC--HHHHHHHHHHHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhhCC--HHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHc
Confidence 4566677788888778888999999999 544332 222222222221 1 233222 11 223445555554444443
Q ss_pred ccCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 189 NQSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 189 ~~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
+- |-++++ |-.|++.|+++|-+|-+.|-..-
T Consensus 118 Ga----davlv~------------------------~P~y~~~s~~~l~~~f~~va~a~ 148 (314)
T 3qze_A 118 GA----DACLLV------------------------TPYYNKPTQEGMYQHFRHIAEAV 148 (314)
T ss_dssp TC----SEEEEE------------------------CCCSSCCCHHHHHHHHHHHHHHS
T ss_pred CC----CEEEEc------------------------CCCCCCCCHHHHHHHHHHHHHhc
Confidence 21 222211 22355679999999999887654
No 34
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=31.38 E-value=1.6e+02 Score=26.21 Aligned_cols=31 Identities=10% Similarity=0.113 Sum_probs=24.3
Q ss_pred CCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 115 TNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 115 t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
.|.+.+.++.+.+-++..||++.+|.+ |...
T Consensus 19 iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~ 50 (291)
T 3a5f_A 19 VDFDKLSELIEWHIKSKTDAIIVCGTTGEATT 50 (291)
T ss_dssp BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGG
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhh
Confidence 566667788888778888999999999 4443
No 35
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=30.00 E-value=2.6e+02 Score=25.11 Aligned_cols=32 Identities=6% Similarity=-0.042 Sum_probs=24.9
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-++..||++.+|.+ |...
T Consensus 25 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~ 57 (309)
T 3fkr_A 25 DLDLASQKRAVDFMIDAGSDGLCILANFSEQFA 57 (309)
T ss_dssp SBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccCccc
Confidence 4566677788888878889999999999 5443
No 36
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=29.70 E-value=1.8e+02 Score=26.58 Aligned_cols=31 Identities=10% Similarity=0.112 Sum_probs=23.8
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQL 144 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~ 144 (296)
..|.+.+.++.+.+-++..||++++|.+ |..
T Consensus 51 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~ 82 (332)
T 2r8w_A 51 RVDIEAFSALIARLDAAEVDSVGILGSTGIYM 82 (332)
T ss_dssp CBCHHHHHHHHHHHHHHTCSEEEESSTTTTGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChh
Confidence 4555667778887777888999999998 444
No 37
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=28.36 E-value=1.6e+02 Score=26.28 Aligned_cols=32 Identities=6% Similarity=-0.057 Sum_probs=24.7
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-++..||++++|.+ |...
T Consensus 20 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~ 52 (294)
T 3b4u_A 20 TVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCS 52 (294)
T ss_dssp SBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhh
Confidence 4566667788888878888999999998 5443
No 38
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=26.70 E-value=1.1e+02 Score=27.82 Aligned_cols=104 Identities=9% Similarity=0.075 Sum_probs=55.1
Q ss_pred CCHHHHHHHHHHhhCCCCcceeeechh-HHHHHHHHHHHHHHHHHHHH-h-cCCCcee--echhhHHHHHHHHHHhhhcc
Q psy14077 115 TNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEGVSWEEAKKLQDANQ-S-ATGDQVI--LVGAASKELKSLAKKLQDAN 189 (296)
Q Consensus 115 t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~av~LEeaAki~l~A~-s-~G~~~~~--l~~~~~~~l~~~~~~~~~~~ 189 (296)
.|.+.+.++.+.+-++..||++.+|.+ |..... .||-.++...+. . .|..++. ..+......+++-+...+++
T Consensus 25 iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls--~~Er~~v~~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~G 102 (311)
T 3h5d_A 25 INFDAIPALIEHLLAHHTDGILLAGTTAESPTLT--HDEELELFAAVQKVVNGRVPLIAGVGTNDTRDSIEFVKEVAEFG 102 (311)
T ss_dssp BCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSC--HHHHHHHHHHHHHHSCSSSCEEEECCCSSHHHHHHHHHHHHHSC
T ss_pred cCHHHHHHHHHHHHHcCCCEEEECccccChhhCC--HHHHHHHHHHHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHhcC
Confidence 444566778888778888999999998 444332 223233322222 2 2322221 12223444455444333321
Q ss_pred cCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhhc
Q psy14077 190 QSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 190 ~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k~ 247 (296)
. -|-++++ |-.|++.|+++|-+|-+.|-..-
T Consensus 103 a---~davlv~------------------------~P~y~~~s~~~l~~~f~~va~a~ 133 (311)
T 3h5d_A 103 G---FAAGLAI------------------------VPYYNKPSQEGMYQHFKAIADAS 133 (311)
T ss_dssp C---CSEEEEE------------------------CCCSSCCCHHHHHHHHHHHHHSC
T ss_pred C---CcEEEEc------------------------CCCCCCCCHHHHHHHHHHHHHhC
Confidence 1 0222211 22355679999999999887643
No 39
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=26.53 E-value=2.4e+02 Score=26.32 Aligned_cols=104 Identities=9% Similarity=-0.018 Sum_probs=55.9
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHHH-HHHHHHHHHHHHHHhcCCCceee--chhhHHHHHHHHHHhhhcc
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLEG-VSWEEAKKLQDANQSATGDQVIL--VGAASKELKSLAKKLQDAN 189 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~a-v~LEeaAki~l~A~s~G~~~~~l--~~~~~~~l~~~~~~~~~~~ 189 (296)
..|.+.+.++.+.+-++..||++.+|.+ |..... ..-.+..+....+. .|..++.. .+......+++-|...+++
T Consensus 76 ~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~-~grvpViaGvg~~st~eai~la~~A~~~G 154 (360)
T 4dpp_A 76 RFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCF-GGSIKVIGNTGSNSTREAIHATEQGFAVG 154 (360)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHH-TTTSEEEEECCCSSHHHHHHHHHHHHHTT
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHh-CCCCeEEEecCCCCHHHHHHHHHHHHHcC
Confidence 3555667778888878888999999998 544332 11112222222221 23322211 2234444555544443332
Q ss_pred cCCCCCceEEeecccccccccccccCccccCCCCCCCCCcccCHHHHHHHHHHHhhh
Q psy14077 190 QSATGDQVILVGAASKGIIQRGFQHNATVYKTPYAKNPFDQMTDQEIEEYKSTVSRK 246 (296)
Q Consensus 190 ~~~~~~~~~~~~~ask~ii~~~~~~~~~~~~~~~~pnpf~~~td~el~~y~~~ve~k 246 (296)
- |-++++ + | .|++.|+++|.+|-+.|-..
T Consensus 155 a----davlvv--------------------~---P-yY~k~sq~gl~~hf~~IA~a 183 (360)
T 4dpp_A 155 M----HAALHI--------------------N---P-YYGKTSIEGLIAHFQSVLHM 183 (360)
T ss_dssp C----SEEEEE--------------------C---C-CSSCCCHHHHHHHHHTTGGG
T ss_pred C----CEEEEc--------------------C---C-CCCCCCHHHHHHHHHHHHHh
Confidence 1 222211 1 2 46667999999999988764
No 40
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=26.52 E-value=2.6e+02 Score=25.06 Aligned_cols=33 Identities=3% Similarity=-0.011 Sum_probs=25.4
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLLE 146 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l~ 146 (296)
..|.+.+.+..+.+-++..||++++|.+ |....
T Consensus 31 ~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~L 64 (307)
T 3s5o_A 31 EVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFL 64 (307)
T ss_dssp CBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGS
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccchhhC
Confidence 4566667788888888889999999999 54443
No 41
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=22.77 E-value=2.5e+02 Score=24.80 Aligned_cols=31 Identities=13% Similarity=0.137 Sum_probs=23.6
Q ss_pred CCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 115 TNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 115 t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
.|.+.+.++.+.+-++..||++++|.+ |...
T Consensus 16 iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~ 47 (286)
T 2r91_A 16 LDPELFANHVKNITSKGVDVVFVAGTTGLGPA 47 (286)
T ss_dssp ECHHHHHHHHHHHHHTTCCEEEETSTTTTGGG
T ss_pred cCHHHHHHHHHHHHHCCCCEEEECccccChhh
Confidence 555667778887777888999999998 5443
No 42
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=22.73 E-value=3.4e+02 Score=24.50 Aligned_cols=32 Identities=6% Similarity=0.101 Sum_probs=25.1
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-++..||++++|.+ |...
T Consensus 28 ~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~ 60 (318)
T 3qfe_A 28 TLDLASQERYYAYLARSGLTGLVILGTNAEAFL 60 (318)
T ss_dssp EECHHHHHHHHHHHHTTTCSEEEESSGGGTGGG
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEeCccccChhh
Confidence 3566677788888888889999999999 5443
No 43
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=22.15 E-value=3e+02 Score=24.41 Aligned_cols=32 Identities=6% Similarity=0.052 Sum_probs=24.6
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-++..||++.+|.+ |...
T Consensus 16 ~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~ 48 (293)
T 1w3i_A 16 RIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPS 48 (293)
T ss_dssp SBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECccccChhh
Confidence 4566667788888778888999999998 5443
No 44
>1lts_C Heat-labIle enterotoxin, subunit A; 1.95A {Escherichia coli} SCOP: d.166.1.1 PDB: 1ltt_C* 1ltb_C
Probab=21.13 E-value=33 Score=22.49 Aligned_cols=18 Identities=28% Similarity=0.493 Sum_probs=15.5
Q ss_pred ccCHHHHHHHHHHHhhhc
Q psy14077 230 QMTDQEIEEYKSTVSRKQ 247 (296)
Q Consensus 230 ~~td~el~~y~~~ve~k~ 247 (296)
.|.-.+|.+|++-|.||-
T Consensus 10 ~Ls~~~L~~fkk~vKRq~ 27 (41)
T 1lts_C 10 NLSTIYLREYQSKVKRQI 27 (41)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHhHHHHHHHHHHHHHHH
Confidence 566789999999999986
No 45
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=20.42 E-value=3.7e+02 Score=24.64 Aligned_cols=32 Identities=6% Similarity=0.093 Sum_probs=24.6
Q ss_pred CCCHHHHHHHHHHhhCCCCcceeeechh-HHHH
Q psy14077 114 NTNPKEFKKLQQQIKENRRADKITSGPQ-SQLL 145 (296)
Q Consensus 114 ~t~p~E~~~v~~aLge~naHGvltaG~s-eA~l 145 (296)
..|.+.+.++.+.+-+...+|++++|.+ |...
T Consensus 43 ~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~ 75 (344)
T 2hmc_A 43 TPDFDALVRKGKELIADGMSAVVYCGSMGDWPL 75 (344)
T ss_dssp SBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGG
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEeCccCcChhh
Confidence 4566667788888778888999999998 5443
No 46
>2ln3_A De novo designed protein OR135; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=20.39 E-value=49 Score=23.91 Aligned_cols=19 Identities=37% Similarity=0.691 Sum_probs=16.4
Q ss_pred CCcccCHHHHHHHHHHHhh
Q psy14077 227 PFDQMTDQEIEEYKSTVSR 245 (296)
Q Consensus 227 pf~~~td~el~~y~~~ve~ 245 (296)
-|+.-.|.|||||.+.+|.
T Consensus 32 efdstddkeieeferdmed 50 (83)
T 2ln3_A 32 EFDSTDDKEIEEFERDMED 50 (83)
T ss_dssp EECCCCHHHHHHHHHHHHH
T ss_pred EecCCChHHHHHHHhHHHH
Confidence 3778899999999998885
No 47
>3h4p_a Proteasome subunit beta; core particle, cytoplasm, hydrolase, protease, threonine protease; 4.10A {Methanocaldococcus jannaschii}
Probab=20.04 E-value=48 Score=28.32 Aligned_cols=25 Identities=24% Similarity=0.371 Sum_probs=18.2
Q ss_pred CCCCcccCHHHHHHHHHHHhhhccC
Q psy14077 225 KNPFDQMTDQEIEEYKSTVSRKQRG 249 (296)
Q Consensus 225 pnpf~~~td~el~~y~~~ve~k~~~ 249 (296)
+|.|..|+++|+++|...++.++..
T Consensus 184 ~~g~~~l~~~ei~~~l~~~~~~~~~ 208 (219)
T 3h4p_a 184 KDGVKIFEDEEIEKILDSMKAKPKK 208 (219)
T ss_dssp TTEEEECCHHHHHHHHHHCC-----
T ss_pred CCCeEEcCHHHHHHHHHHhhccccc
Confidence 4579999999999999998877643
Done!