BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14080
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q24372|LACH_DROME Lachesin OS=Drosophila melanogaster GN=Lac PE=2 SV=2
Length = 359
Score = 37.4 bits (85), Expect = 0.025, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 49 LTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91
L++G D+RF + + S + LQIK +Q+ D GTY CQ
Sbjct: 72 LSTGSTLVIKDSRFSLRYDPNSSTYKLQIKDIQETDAGTYTCQ 114
>sp|P15364|AMAL_DROME Protein amalgam OS=Drosophila melanogaster GN=Ama PE=2 SV=2
Length = 333
Score = 36.2 bits (82), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 43/92 (46%), Gaps = 12/92 (13%)
Query: 12 FGQISTGFLAVFSYS---DKTVRDIVKVRVSWVRRRDWHILTSGVLTYTN-----DARFQ 63
QIS +A S + TV ++ ++ VSW +R S VL+ N D R+
Sbjct: 27 ISQISKDVVASVGDSVEFNCTVEEVGQLSVSWAKRPSESDTNSVVLSMRNILSLPDQRYN 86
Query: 64 VIHTDG----SDDWNLQIKFLQKRDNGTYECQ 91
V T+G S + +I+ ++ D G YECQ
Sbjct: 87 VTVTEGPKTGSAIYTFRIQNIEVSDMGPYECQ 118
>sp|Q26474|LACH_SCHAM Lachesin OS=Schistocerca americana GN=LAC PE=1 SV=1
Length = 349
Score = 35.4 bits (80), Expect = 0.094, Method: Composition-based stats.
Identities = 18/59 (30%), Positives = 33/59 (55%)
Query: 33 IVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91
++ ++V R+ D +++G D+RF + + S + LQIK +Q+ D G Y+CQ
Sbjct: 53 VLWMKVDRNRQVDPLPISTGSSLIIRDSRFALRYDTASSTYTLQIKDIQETDAGFYQCQ 111
>sp|Q02242|PDCD1_MOUSE Programmed cell death protein 1 OS=Mus musculus GN=Pdcd1 PE=1 SV=1
Length = 288
Score = 33.1 bits (74), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 28/58 (48%)
Query: 49 LTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQPYTTTSHSQNAPG 106
+G+ DARFQ+I D+++ I ++ D+G Y C A + + +PG
Sbjct: 82 FCNGLSQPVQDARFQIIQLPNRHDFHMNILDTRRNDSGIYLCGAISLHPKAKIEESPG 139
>sp|Q6WRH9|IGS10_RAT Immunoglobulin superfamily member 10 OS=Rattus norvegicus GN=Igsf10
PE=2 SV=1
Length = 2597
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 32/61 (52%), Gaps = 7/61 (11%)
Query: 33 IVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92
I K +V+W R H L S T R +++H G+ L I+ LQ D+G Y+C+A
Sbjct: 2529 IPKPKVTWETPR--HSLLSKA-TARKPHRSEMLHPQGT----LVIQNLQTSDSGVYKCRA 2581
Query: 93 Q 93
Q
Sbjct: 2582 Q 2582
>sp|Q8BH34|SEM3D_MOUSE Semaphorin-3D OS=Mus musculus GN=Sema3d PE=1 SV=1
Length = 777
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 13/25 (52%), Positives = 19/25 (76%)
Query: 72 DWNLQIKFLQKRDNGTYECQAQPYT 96
D+ L I+ LQK+D+G Y C+AQ +T
Sbjct: 647 DYGLLIRSLQKKDSGMYYCKAQEHT 671
>sp|A1DWM3|MFSD6_PIG Major facilitator superfamily domain-containing protein 6 OS=Sus
scrofa GN=MFSD6 PE=2 SV=1
Length = 798
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 48 ILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQPYTTTSHSQ 102
+L + L RF+ H ++ +++ Q N + EC + TTTSHSQ
Sbjct: 386 VLMTMALIVATQFRFRYNHFKNGENKGKEVEIPQVERNSSTECSEETPTTTSHSQ 440
>sp|Q17QJ5|TSN5_BOVIN Tetraspanin-5 OS=Bos taurus GN=TSPAN5 PE=2 SV=1
Length = 268
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 19 FLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTND-----------ARFQVIHT 67
FL + + + T + V W++ + + + + + Y +D +Q
Sbjct: 97 FLGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDDIDLQNLIDFTQEYWQCCGA 156
Query: 68 DGSDDWNLQIKFLQKRDNGTYECQAQPYTTTSH 100
G+DDWNL I F N + E P++ +
Sbjct: 157 FGADDWNLNIYFNCTDSNASRERCGVPFSCCTK 189
>sp|Q68VK5|TSN5_RAT Tetraspanin-5 OS=Rattus norvegicus GN=Tspan5 PE=2 SV=2
Length = 268
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 19 FLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTND-----------ARFQVIHT 67
FL + + + T + V W++ + + + + + Y +D +Q
Sbjct: 97 FLGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDDIDLQNLIDFTQEYWQCCGA 156
Query: 68 DGSDDWNLQIKFLQKRDNGTYECQAQPYTTTSH 100
G+DDWNL I F N + E P++ +
Sbjct: 157 FGADDWNLNIYFNCTDSNASRERCGVPFSCCTK 189
>sp|P62080|TSN5_MOUSE Tetraspanin-5 OS=Mus musculus GN=Tspan5 PE=2 SV=1
Length = 268
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 19 FLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTND-----------ARFQVIHT 67
FL + + + T + V W++ + + + + + Y +D +Q
Sbjct: 97 FLGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDDIDLQNLIDFTQEYWQCCGA 156
Query: 68 DGSDDWNLQIKFLQKRDNGTYECQAQPYTTTSH 100
G+DDWNL I F N + E P++ +
Sbjct: 157 FGADDWNLNIYFNCTDSNASRERCGVPFSCCTK 189
>sp|P62079|TSN5_HUMAN Tetraspanin-5 OS=Homo sapiens GN=TSPAN5 PE=2 SV=1
Length = 268
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/93 (20%), Positives = 37/93 (39%), Gaps = 11/93 (11%)
Query: 19 FLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTND-----------ARFQVIHT 67
FL + + + T + V W++ + + + + + Y +D +Q
Sbjct: 97 FLGIIFFLELTAGVLAFVFKDWIKDQLYFFINNNIRAYRDDIDLQNLIDFTQEYWQCCGA 156
Query: 68 DGSDDWNLQIKFLQKRDNGTYECQAQPYTTTSH 100
G+DDWNL I F N + E P++ +
Sbjct: 157 FGADDWNLNIYFNCTDSNASRERCGVPFSCCTK 189
>sp|O95025|SEM3D_HUMAN Semaphorin-3D OS=Homo sapiens GN=SEMA3D PE=2 SV=2
Length = 777
Score = 31.2 bits (69), Expect = 1.7, Method: Composition-based stats.
Identities = 12/25 (48%), Positives = 19/25 (76%)
Query: 72 DWNLQIKFLQKRDNGTYECQAQPYT 96
++ L I+ LQK+D+G Y C+AQ +T
Sbjct: 647 EYGLLIRSLQKKDSGMYYCKAQEHT 671
>sp|Q8R5M8|CADM1_MOUSE Cell adhesion molecule 1 OS=Mus musculus GN=Cadm1 PE=1 SV=2
Length = 456
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 74 NLQIKFLQKRDNGTYECQAQPYTTTSHS 101
NL I L K DNGTY C+A +HS
Sbjct: 300 NLFINNLNKTDNGTYRCEASNIVGKAHS 327
>sp|Q9BY67|CADM1_HUMAN Cell adhesion molecule 1 OS=Homo sapiens GN=CADM1 PE=1 SV=2
Length = 442
Score = 31.2 bits (69), Expect = 2.0, Method: Composition-based stats.
Identities = 14/28 (50%), Positives = 16/28 (57%)
Query: 74 NLQIKFLQKRDNGTYECQAQPYTTTSHS 101
NL I L K DNGTY C+A +HS
Sbjct: 297 NLFINNLNKTDNGTYRCEASNIVGKAHS 324
>sp|P18528|HVM57_MOUSE Ig heavy chain V region 6.96 OS=Mus musculus PE=4 SV=1
Length = 98
Score = 30.8 bits (68), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Query: 1 MVAAPGGILTAFGQISTGFLAV-FSYSDKT---VRDIVKVRVSWVRRRDWHILTSGVLTY 56
+V + GG++ G + A F++SD VR + R+ WV I G TY
Sbjct: 4 LVESGGGLVKPGGSLKLSCAASGFTFSDYYMYWVRQTPEKRLEWVA----TISDGGSYTY 59
Query: 57 TNDA---RFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90
D+ RF + + ++ LQ+ L+ D Y C
Sbjct: 60 YPDSVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC 96
>sp|Q5VST9|OBSCN_HUMAN Obscurin OS=Homo sapiens GN=OBSCN PE=1 SV=3
Length = 7968
Score = 30.8 bits (68), Expect = 2.4, Method: Composition-based stats.
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 8/61 (13%)
Query: 41 VRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQPYTTTSH 100
V ++D ++T G R V++ D +++ L+I F ++ D G Y C A ++
Sbjct: 270 VWKKDGQLVTEG--------RRHVVYEDAQENFVLKILFCKQSDRGLYTCTASNLVGQTY 321
Query: 101 S 101
S
Sbjct: 322 S 322
>sp|P18525|HVM54_MOUSE Ig heavy chain V region 5-84 OS=Mus musculus PE=1 SV=1
Length = 117
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/97 (26%), Positives = 42/97 (43%), Gaps = 11/97 (11%)
Query: 1 MVAAPGGILTAFGQISTGFLAV-FSYSDKT---VRDIVKVRVSWVRRRDWHILTSGVLTY 56
+V + GG++ G + A F++S T VR + R+ WV +I G TY
Sbjct: 23 LVESGGGLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVA----YISNGGGSTY 78
Query: 57 TND---ARFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90
D RF + + ++ LQ+ L+ D Y C
Sbjct: 79 YPDTVKGRFTISRDNAKNNLYLQMSSLKSEDTAMYYC 115
>sp|P09324|YES_CHICK Tyrosine-protein kinase Yes OS=Gallus gallus GN=YES1 PE=1 SV=3
Length = 541
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 33/71 (46%), Gaps = 4/71 (5%)
Query: 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARF 62
P G +T FG S+ F AV S T+ V V +V D+ T+ L++ RF
Sbjct: 61 GGPSG-MTPFGGASSSFSAVPSPYPSTLTGGVTV---FVALYDYEARTTDDLSFKKGERF 116
Query: 63 QVIHTDGSDDW 73
Q+I+ D W
Sbjct: 117 QIINNTEGDWW 127
>sp|Q9BZZ2|SN_HUMAN Sialoadhesin OS=Homo sapiens GN=SIGLEC1 PE=1 SV=2
Length = 1709
Score = 30.4 bits (67), Expect = 3.1, Method: Composition-based stats.
Identities = 23/85 (27%), Positives = 38/85 (44%), Gaps = 7/85 (8%)
Query: 8 ILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHT 67
+LTAF + G + + S + + + V HIL S + RF T
Sbjct: 416 VLTAFLETQAGLVGILHCSV-----VSEPLATLVLSHGGHILASTSGDSDHSPRFS--GT 468
Query: 68 DGSDDWNLQIKFLQKRDNGTYECQA 92
G + L+I+ L++ D+G Y+C A
Sbjct: 469 SGPNSLRLEIRDLEETDSGEYKCSA 493
>sp|Q6DJ83|CADM2_XENTR Cell adhesion molecule 2 OS=Xenopus tropicalis GN=cadm2 PE=2 SV=1
Length = 433
Score = 30.4 bits (67), Expect = 3.4, Method: Composition-based stats.
Identities = 12/18 (66%), Positives = 13/18 (72%)
Query: 75 LQIKFLQKRDNGTYECQA 92
L I FL K DNGTY C+A
Sbjct: 281 LTISFLNKTDNGTYRCEA 298
>sp|Q1WIM2|CADM2_RAT Cell adhesion molecule 2 OS=Rattus norvegicus GN=Cadm2 PE=1 SV=2
Length = 435
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 74 NLQIKFLQKRDNGTYECQA 92
L I FL K DNGTY C+A
Sbjct: 280 ELNILFLNKTDNGTYRCEA 298
>sp|Q8BLQ9|CADM2_MOUSE Cell adhesion molecule 2 OS=Mus musculus GN=Cadm2 PE=1 SV=2
Length = 435
Score = 30.4 bits (67), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 74 NLQIKFLQKRDNGTYECQA 92
L I FL K DNGTY C+A
Sbjct: 280 ELNILFLNKTDNGTYRCEA 298
>sp|Q8N3J6|CADM2_HUMAN Cell adhesion molecule 2 OS=Homo sapiens GN=CADM2 PE=2 SV=1
Length = 435
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 12/19 (63%), Positives = 13/19 (68%)
Query: 74 NLQIKFLQKRDNGTYECQA 92
L I FL K DNGTY C+A
Sbjct: 280 ELNILFLNKTDNGTYRCEA 298
>sp|Q80W68|KIRR1_MOUSE Kin of IRRE-like protein 1 OS=Mus musculus GN=Kirrel PE=1 SV=1
Length = 789
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 61 RFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92
R++V+ + + +NL+I + D+ +YECQA
Sbjct: 103 RYRVVGSADAGQYNLEITDAELSDDASYECQA 134
>sp|Q6X936|KIRR1_RAT Kin of IRRE-like protein 1 OS=Rattus norvegicus GN=Kirrel PE=1 SV=1
Length = 789
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 61 RFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92
R++V+ + + +NL+I + D+ +YECQA
Sbjct: 103 RYRVVGSADAGQYNLEITDAELSDDASYECQA 134
>sp|Q96J84|KIRR1_HUMAN Kin of IRRE-like protein 1 OS=Homo sapiens GN=KIRREL PE=1 SV=2
Length = 757
Score = 30.0 bits (66), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 21/32 (65%)
Query: 61 RFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92
R++V+ + + +NL+I + D+ +YECQA
Sbjct: 71 RYRVVGSADAGQYNLEITDAELSDDASYECQA 102
>sp|Q9NYZ4|SIGL8_HUMAN Sialic acid-binding Ig-like lectin 8 OS=Homo sapiens GN=SIGLEC8
PE=1 SV=2
Length = 499
Score = 29.6 bits (65), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 31/74 (41%), Gaps = 8/74 (10%)
Query: 23 FSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTND--------ARFQVIHTDGSDDWN 74
FSY D V W R D + V T D RFQ++ S+D +
Sbjct: 49 FSYPQDGWTDSDPVHGYWFRAGDRPYQDAPVATNNPDREVQAETQGRFQLLGDIWSNDCS 108
Query: 75 LQIKFLQKRDNGTY 88
L I+ +KRD G+Y
Sbjct: 109 LSIRDARKRDKGSY 122
>sp|Q6ZSS7|MFSD6_HUMAN Major facilitator superfamily domain-containing protein 6 OS=Homo
sapiens GN=MFSD6 PE=1 SV=2
Length = 791
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 48 ILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQPYTTTSHSQ 102
+L + L RF+ H D +++ Q N + E + TTTSHSQ
Sbjct: 377 VLMTMALIVATQFRFRYNHFKNDDSKGKEVEIPQVERNNSTESSEETPTTTSHSQ 431
>sp|Q8NDA2|HMCN2_HUMAN Hemicentin-2 OS=Homo sapiens GN=HMCN2 PE=2 SV=2
Length = 5065
Score = 28.9 bits (63), Expect = 8.5, Method: Composition-based stats.
Identities = 12/29 (41%), Positives = 18/29 (62%)
Query: 64 VIHTDGSDDWNLQIKFLQKRDNGTYECQA 92
++ +GS L+I Q+RD GTY C+A
Sbjct: 739 ILAPEGSSSGKLRIPAAQERDAGTYTCRA 767
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.135 0.421
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 44,576,513
Number of Sequences: 539616
Number of extensions: 1629126
Number of successful extensions: 3499
Number of sequences better than 100.0: 34
Number of HSP's better than 100.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 16
Number of HSP's that attempted gapping in prelim test: 3446
Number of HSP's gapped (non-prelim): 69
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)