Query psy14080
Match_columns 113
No_of_seqs 149 out of 1029
Neff 8.2
Searched_HMMs 29240
Date Fri Aug 16 19:04:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14080.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14080hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bp6_A Programmed cell death p 99.8 3.2E-19 1.1E-23 113.3 12.8 100 10-109 3-114 (117)
2 3bik_B Programmed cell death p 99.8 8.7E-19 3E-23 114.1 13.0 106 5-110 8-125 (134)
3 3m45_A Cell adhesion molecule 99.8 2.2E-18 7.4E-23 106.1 13.4 96 11-108 11-106 (108)
4 2e27_L Anti-ciguatoxin antibod 99.8 8.5E-19 2.9E-23 111.9 11.6 103 9-113 6-115 (119)
5 3knb_A Titin; IG-like, titin, 99.8 5.4E-19 1.8E-23 109.6 9.8 96 3-108 3-99 (100)
6 3rrq_A Protein PD-1, programme 99.8 8E-19 2.7E-23 113.4 10.7 102 8-109 3-116 (129)
7 1hkf_A NKP44, NK cell activati 99.8 8.8E-19 3E-23 112.5 10.7 85 11-95 15-106 (122)
8 1zox_A CLM-1; IG-superfamily, 99.8 2.2E-18 7.4E-23 108.2 11.6 97 12-108 7-110 (113)
9 1mqk_L Antibody 7E2 FV fragmen 99.8 3.5E-18 1.2E-22 109.1 11.5 99 10-110 5-111 (120)
10 2xt1_B Camelid VHH 9; viral pr 99.8 5.3E-18 1.8E-22 108.5 12.2 97 13-110 9-117 (121)
11 1jhl_L IGG1-kappa D11.15 FV (l 99.8 4.8E-18 1.6E-22 105.9 11.4 96 10-107 5-107 (108)
12 3rbg_A Cytotoxic and regulator 99.8 3.9E-18 1.3E-22 108.8 11.0 98 10-109 5-102 (124)
13 2oi9_C V beta, T cell receptor 99.8 1.3E-17 4.3E-22 106.8 13.1 102 10-113 5-116 (121)
14 1dlf_L Anti-dansyl immunoglobu 99.8 5.8E-18 2E-22 106.5 11.3 97 10-108 5-113 (113)
15 1i8k_A Epidermal growth factor 99.8 3.2E-18 1.1E-22 106.8 9.9 84 10-95 5-93 (107)
16 2nms_A CMRF35-like-molecule 1; 99.8 7.3E-18 2.5E-22 108.4 11.8 98 12-109 8-112 (124)
17 3cx2_A Myosin-binding protein 99.8 3E-18 1E-22 106.8 9.6 98 5-108 3-108 (108)
18 1xed_A Polymeric-immunoglobuli 99.8 3.6E-18 1.2E-22 108.9 10.0 101 13-113 7-116 (117)
19 1eeq_A Kappa-4 immunoglobulin 99.8 3.6E-18 1.2E-22 107.7 9.9 97 10-108 5-114 (114)
20 1i3g_L Antibody FV fragment; a 99.8 2.8E-18 9.6E-23 107.8 9.2 97 10-108 8-111 (111)
21 2q20_A VK1 O18/O8 germline lig 99.8 6.8E-18 2.3E-22 105.6 10.9 95 10-106 7-108 (109)
22 1qfw_M FV, antibody (anti beta 99.8 3.9E-18 1.3E-22 106.5 9.7 96 10-107 5-107 (108)
23 3knb_B Obscurin-like protein 1 99.8 4.5E-18 1.6E-22 106.7 10.0 93 4-108 12-105 (107)
24 1pew_A JTO2, A lambda-6 type i 99.8 3.5E-18 1.2E-22 106.9 9.5 96 13-108 7-109 (109)
25 2q87_A CMRF35-H antigen; all-b 99.8 1.6E-18 5.6E-23 108.4 7.9 94 13-106 3-106 (110)
26 2yc1_B Single chain antibody f 99.8 6.9E-18 2.3E-22 111.8 11.1 101 9-111 19-126 (146)
27 1fo0_A Protein (BM3.3 T cell r 99.8 3.7E-18 1.3E-22 108.0 9.3 85 10-94 4-95 (116)
28 2atp_B T-cell surface glycopro 99.8 5.8E-18 2E-22 106.7 10.1 86 10-95 2-101 (115)
29 1sq2_N Novel antigen receptor; 99.8 6.5E-18 2.2E-22 106.7 10.2 79 10-94 4-87 (113)
30 2z35_A T-cell receptor alpha-c 99.8 4.6E-18 1.6E-22 106.8 9.4 84 10-93 4-92 (112)
31 2i24_N NEW antigen receptor PB 99.8 7.7E-18 2.6E-22 108.1 10.4 78 10-93 4-86 (121)
32 4ffy_L DENV1-E111 single chain 99.8 1.2E-17 3.9E-22 107.3 11.0 99 9-109 4-113 (126)
33 1h5b_A Murine T cell receptor 99.8 1.4E-17 4.9E-22 104.6 11.2 83 10-94 5-92 (113)
34 3moq_A NEW antigen receptor va 99.8 7.4E-18 2.5E-22 109.1 10.1 79 10-94 4-87 (126)
35 4gjt_B Poliovirus receptor-rel 99.8 3E-18 1E-22 109.5 8.0 102 12-113 6-122 (123)
36 3u6r_L Antibody 1:7 (light cha 99.8 1.3E-17 4.4E-22 110.1 11.3 99 9-109 3-107 (143)
37 3r8b_B G5-8, enterotoxin type 99.8 2.6E-17 8.8E-22 105.8 12.3 101 10-111 9-119 (125)
38 3dmm_D T-cell surface glycopro 99.8 9.7E-18 3.3E-22 111.2 10.6 102 9-110 4-121 (150)
39 2coq_A NEW antigen receptor va 99.8 8.1E-18 2.8E-22 105.2 9.6 79 10-94 4-87 (108)
40 3t0v_A Immunoglobulin variable 99.8 9.7E-18 3.3E-22 107.9 10.1 99 9-110 4-113 (123)
41 1mfa_H IGG1-lambda Se155-4 FAB 99.7 1.7E-17 5.7E-22 105.5 11.0 82 13-94 7-100 (120)
42 1z9m_A GAPA225; nectin-like, I 99.7 3E-17 1E-21 107.1 12.5 98 10-109 42-139 (145)
43 1zvy_A Immunoglobulin heavy ch 99.7 7.5E-18 2.6E-22 110.1 9.5 101 13-113 7-132 (136)
44 3qp3_A Titin; I-SET IG-like, s 99.7 1.8E-17 6.2E-22 101.7 10.7 95 4-110 7-102 (103)
45 1nko_A Sialic acid binding IG- 99.7 3.3E-18 1.1E-22 110.1 7.6 101 8-108 8-127 (132)
46 1u9k_A Triggering receptor exp 99.7 3.8E-18 1.3E-22 107.7 7.7 85 12-96 5-99 (114)
47 3bj9_1 Immunoglobulin IOTA cha 99.7 2.7E-17 9.2E-22 103.6 11.6 96 13-108 5-114 (116)
48 2frg_P TREM-like transcript-1; 99.7 1.4E-17 4.7E-22 104.7 10.1 94 13-107 4-104 (106)
49 3bia_X T-cell immunoglobulin a 99.7 1.1E-17 3.9E-22 105.5 9.8 95 14-108 4-111 (116)
50 1j05_L T84.66 antibody, anti-C 99.7 8.8E-18 3E-22 105.3 9.2 85 9-95 4-97 (111)
51 3iy0_H FAB 14, heavy domain; c 99.7 1.1E-17 3.7E-22 106.8 9.7 81 14-94 8-100 (120)
52 1rjc_A 1D2L19, camelid heavy c 99.7 1E-17 3.6E-22 109.6 9.7 101 13-113 7-133 (137)
53 1yc7_A Anti-VSG immunoglobulin 99.7 1.7E-17 5.8E-22 106.7 10.4 98 13-110 7-120 (124)
54 1zvh_A Immunoglobulin heavy ch 99.7 6.9E-18 2.4E-22 109.8 8.6 101 13-113 7-130 (134)
55 1q8m_A Triggering receptor exp 99.7 2.3E-17 8E-22 107.2 11.1 86 9-94 7-102 (127)
56 1tvd_A T cell receptor, ES204 99.7 1E-17 3.5E-22 105.7 9.1 85 10-94 4-97 (116)
57 2ywz_A NEW antigen receptor va 99.7 1.8E-17 6.1E-22 104.2 10.1 79 10-94 4-87 (111)
58 1u2h_A APEG-1, aortic preferen 99.7 3.2E-17 1.1E-21 99.8 10.8 94 5-109 5-99 (99)
59 2eys_A NKT15; natural killer T 99.7 5.9E-17 2E-21 112.6 13.4 101 9-109 6-117 (210)
60 2ol3_A BM3.3 T-cell receptor a 99.7 3.1E-18 1E-22 112.7 6.5 101 10-110 4-118 (142)
61 1qfo_A Protein (sialoadhesin); 99.7 1.2E-17 4.2E-22 105.5 8.9 98 12-109 6-119 (119)
62 2bk8_A Connectin, M1, titin he 99.7 4.7E-17 1.6E-21 99.1 11.2 90 9-109 4-95 (97)
63 1g1c_A Immunoglobulin-like dom 99.7 5.4E-17 1.8E-21 98.8 11.5 94 5-109 5-99 (99)
64 2h32_A Immunoglobulin IOTA cha 99.7 9.5E-18 3.2E-22 108.1 8.4 82 13-94 7-100 (126)
65 1pko_A Myelin oligodendrocyte 99.7 5.4E-17 1.8E-21 105.0 11.8 100 10-109 10-122 (139)
66 1neu_A Myelin P0 protein; stru 99.7 2.6E-17 8.9E-22 103.9 9.9 99 11-109 4-120 (124)
67 3noi_A Natural cytotoxicity tr 99.7 4.1E-18 1.4E-22 108.3 6.2 89 4-94 5-102 (120)
68 2nw2_A ELS4 TCR alpha chain; T 99.7 2.6E-17 8.8E-22 113.6 10.7 99 10-109 4-111 (200)
69 1p4b_L Antibody variable light 99.7 1.6E-17 5.4E-22 108.5 9.0 95 13-109 12-116 (135)
70 2or8_A Hepatitis A virus cellu 99.7 9.2E-18 3.2E-22 105.2 7.6 96 14-109 5-112 (116)
71 2cqv_A MLCK, myosin light chai 99.7 5.8E-17 2E-21 101.5 11.2 94 4-109 6-100 (114)
72 1oaq_L Light chain; antibody, 99.7 1.6E-17 5.4E-22 105.6 8.7 95 14-110 8-112 (120)
73 3eak_A NBBCII10-FGLA; antibody 99.7 2.3E-17 7.8E-22 108.2 9.6 100 14-113 8-133 (137)
74 1dlf_H Anti-dansyl immunoglobu 99.7 4.9E-17 1.7E-21 104.1 11.0 96 14-109 8-122 (124)
75 2edn_A Myosin-binding protein 99.7 9.7E-18 3.3E-22 107.8 7.6 100 4-109 10-117 (118)
76 1kxv_C Camelid VHH domain CAB1 99.7 4.4E-17 1.5E-21 103.8 10.6 82 13-94 7-99 (121)
77 3k3q_A Llama AA1 VHH domain; l 99.7 9.2E-17 3.2E-21 107.0 12.6 100 10-110 8-142 (151)
78 3puc_A Titin; I-SET IG-like do 99.7 8.5E-17 2.9E-21 97.7 11.2 92 5-108 6-98 (99)
79 2q86_A Valpha14 TCR; INKT cell 99.7 5.5E-17 1.9E-21 114.3 11.8 101 9-109 4-111 (229)
80 2bnu_A TCR alpha chain, T-cell 99.7 3.9E-17 1.3E-21 112.6 10.8 100 10-109 4-114 (203)
81 1smo_A Triggering receptor exp 99.7 4.1E-17 1.4E-21 104.4 10.2 97 12-108 5-115 (119)
82 3khq_A B-cell antigen receptor 99.7 2.4E-17 8.3E-22 107.2 9.1 91 9-109 20-118 (133)
83 3dmm_C T-cell surface glycopro 99.7 4.5E-17 1.5E-21 110.2 10.7 87 9-96 12-113 (166)
84 3b9v_A Heavy chain variable do 99.7 5.8E-17 2E-21 102.9 10.5 82 13-94 7-100 (120)
85 1kgc_D T-cell receptor alpha c 99.7 6.6E-17 2.3E-21 111.9 11.7 98 10-109 4-113 (206)
86 1nez_G T-cell surface glycopro 99.7 2.8E-17 9.4E-22 106.4 9.1 85 9-95 7-107 (128)
87 2yc1_A Single chain antibody f 99.7 6.3E-17 2.2E-21 102.2 10.6 82 13-94 7-100 (117)
88 2d7t_H Anti polyhydroxybutyrat 99.7 3.8E-17 1.3E-21 107.1 9.8 97 13-109 7-117 (139)
89 1fo0_B Protein (BM3.3 T cell r 99.7 2.6E-17 8.9E-22 103.7 8.7 82 10-94 5-95 (112)
90 2jju_A Signal regulatory prote 99.7 1.6E-17 5.3E-22 106.7 7.6 102 8-111 5-119 (127)
91 3k1k_C Enhancer; nanobody, ant 99.7 9.4E-17 3.2E-21 103.2 11.3 85 9-94 6-102 (123)
92 2dav_A SLOW MYBP-C, myosin-bin 99.7 6.4E-17 2.2E-21 105.0 10.5 100 3-108 4-111 (126)
93 2otu_A FV light chain variable 99.7 5.5E-17 1.9E-21 102.4 10.0 82 10-94 6-97 (115)
94 2or7_A T-cell immunoglobulin a 99.7 1.6E-17 5.3E-22 104.6 7.4 97 13-109 4-111 (115)
95 1n4x_H Immunoglobulin heavy ch 99.7 6.9E-17 2.4E-21 102.5 10.4 83 13-95 7-101 (120)
96 3tpk_A Immunoglobulin heavy ch 99.7 8.9E-17 3E-21 105.1 11.2 101 9-110 8-127 (136)
97 3bdb_A Novel immune-type recep 99.7 1.4E-17 4.9E-22 108.7 7.2 98 11-110 4-115 (137)
98 2p45_B Antibody CAB-RN05; seMe 99.7 9.1E-17 3.1E-21 102.5 10.7 81 14-94 10-102 (123)
99 1mqk_H Antibody 7E2 FV fragmen 99.7 3.3E-17 1.1E-21 105.3 8.6 97 14-110 8-120 (127)
100 2oyp_A Hepatitis A virus cellu 99.7 3.1E-17 1.1E-21 101.3 8.1 94 14-107 2-107 (109)
101 2qhl_A Novel immune-type recep 99.7 2.2E-17 7.6E-22 103.6 7.4 82 12-95 5-98 (111)
102 2ptt_A CD48 antigen; CD244, CD 99.7 4.5E-17 1.5E-21 101.6 8.8 94 12-109 9-109 (110)
103 1j05_H T84.66 antibody, anti-C 99.7 9.7E-17 3.3E-21 102.1 10.4 82 13-94 7-100 (121)
104 1i3u_A Antibody VHH LAMA domai 99.7 7.2E-17 2.5E-21 103.7 9.6 83 13-95 7-106 (127)
105 1kxt_B Immunoglobulin VHH frag 99.7 7.7E-17 2.6E-21 103.8 9.6 82 13-94 7-99 (127)
106 1waa_A Titin; metal binding pr 99.7 2E-16 6.7E-21 96.9 11.0 84 10-108 9-92 (93)
107 2lu7_A Obscurin-like protein 1 99.7 5.5E-17 1.9E-21 98.0 8.3 80 14-108 4-83 (84)
108 2wzp_D Camelid VHH5; baseplate 99.7 7.6E-17 2.6E-21 102.8 9.4 82 13-94 7-100 (123)
109 2ak4_D SB27 T cell receptor al 99.7 8E-17 2.7E-21 111.9 10.3 101 9-109 6-118 (211)
110 2yuz_A Myosin-binding protein 99.7 8.1E-17 2.8E-21 99.7 9.1 88 8-109 9-96 (100)
111 1xiw_D Immunoglobulin heavy ch 99.7 1E-16 3.6E-21 102.2 9.8 82 13-94 7-100 (122)
112 3kg5_A B-cell antigen receptor 99.7 1.3E-16 4.5E-21 104.2 10.4 92 10-110 22-121 (134)
113 2hp4_A T-cell surface glycopro 99.7 4.3E-17 1.5E-21 103.2 7.7 84 10-95 4-99 (114)
114 4gos_A V-SET domain-containing 99.7 9.7E-17 3.3E-21 103.2 9.5 97 12-108 11-120 (125)
115 3cx5_J Heavy chain (VH) of FV- 99.7 1.1E-16 3.8E-21 102.9 9.7 82 13-94 7-100 (127)
116 3k74_B Nanobody; immunoglobuli 99.7 1.5E-16 5E-21 100.7 10.0 80 15-94 7-98 (115)
117 3irg_A Titin; IG-like, titin, 99.7 2E-16 6.8E-21 95.9 10.2 95 4-108 4-99 (100)
118 3u6r_H Antibody 1:7 (heavy cha 99.7 2.1E-16 7.3E-21 105.0 11.2 87 8-94 5-103 (149)
119 3mbe_C I-AG7; T cell receptor, 99.7 1.7E-16 5.8E-21 112.2 11.3 99 9-109 4-111 (229)
120 1u3h_A T-cell receptor alpha-c 99.5 1.2E-18 3.9E-23 109.4 0.0 84 11-94 4-92 (110)
121 3g9a_B Minimizer; antibody com 99.7 1.4E-16 4.9E-21 104.9 10.1 86 10-96 7-103 (139)
122 3k81_A Single strand antibody 99.7 5.3E-17 1.8E-21 105.3 7.7 80 15-94 9-99 (127)
123 4ei6_A Valpha1 XV19 type II na 99.7 8.7E-17 3E-21 112.3 9.4 101 9-109 5-115 (208)
124 1ypz_E T cell receptor delta, 99.7 3.1E-16 1.1E-20 107.7 12.0 98 10-108 5-118 (207)
125 2kdg_A Myotilin; immonoglobuli 99.7 2E-16 6.8E-21 96.4 9.9 94 5-109 5-99 (100)
126 1a2y_B IGG1-kappa D1.3 FV (hea 99.7 1.4E-16 4.9E-21 100.6 9.4 81 14-94 8-99 (116)
127 1dqt_A CTLA4, cytotoxic T lymp 99.7 1.1E-16 3.7E-21 101.2 8.8 81 12-94 5-96 (117)
128 3rgv_A YAE62 TCR A chain; TCR, 99.7 1.7E-16 5.7E-21 110.2 10.4 100 10-109 4-110 (200)
129 2x1q_A Gelsolin nanobody; cont 99.7 7.5E-17 2.5E-21 103.8 7.9 82 13-94 7-100 (127)
130 2vyr_E Human single domain ant 99.7 4.9E-16 1.7E-20 103.5 12.0 81 14-94 8-100 (153)
131 3q0h_A T cell immunoreceptor w 99.7 1.5E-16 5E-21 101.1 8.9 97 5-109 4-109 (117)
132 1jtp_A Single-domain antibody; 99.7 5.4E-16 1.9E-20 102.6 12.0 82 13-94 7-100 (148)
133 1lp9_E T-cell receptor alpha c 99.7 5.1E-17 1.8E-21 111.5 7.2 101 9-109 4-115 (194)
134 3udw_C Poliovirus receptor; PV 99.7 2E-16 6.9E-21 98.4 9.4 100 10-109 4-117 (118)
135 1x44_A Myosin-binding protein 99.7 2E-16 6.8E-21 97.5 9.2 92 3-109 4-97 (103)
136 1oga_D T-cell receptor alpha c 99.7 1.8E-16 6.3E-21 110.6 10.1 99 10-109 5-111 (215)
137 1xt5_A Variable region-contain 99.7 3.5E-16 1.2E-20 100.1 10.6 97 10-109 8-134 (135)
138 3irg_B Obscurin-like protein 1 99.7 3.2E-16 1.1E-20 96.5 10.0 93 4-108 12-105 (107)
139 1sjv_A R9; camelids antibody, 99.7 6.4E-17 2.2E-21 101.8 6.8 82 13-94 7-99 (114)
140 1gl4_B Basement membrane-speci 99.7 4.8E-16 1.6E-20 94.7 10.5 89 4-108 8-98 (98)
141 3r0m_A Llama VHH A12; IG domai 99.7 2.5E-16 8.5E-21 104.0 9.8 83 12-94 6-100 (143)
142 1dee_B IGM RF 2A2; FAB-IBP com 99.7 2.5E-16 8.7E-21 108.7 10.3 95 14-108 8-121 (223)
143 1eaj_A Coxsackie virus and ade 99.7 1.4E-16 4.9E-21 99.7 8.2 97 12-108 11-125 (126)
144 1pd6_A Cardiac MYBP-C;, myosin 99.7 3.9E-16 1.3E-20 97.2 10.0 91 3-108 13-104 (104)
145 2yz1_A Tyrosine-protein phosph 99.7 9.7E-17 3.3E-21 101.5 7.4 84 10-95 11-100 (120)
146 2d9c_A Signal-regulatory prote 99.7 9.6E-17 3.3E-21 103.8 7.4 99 9-109 11-122 (136)
147 2yuv_A Myosin-binding protein 99.7 4.9E-16 1.7E-20 95.2 10.3 90 5-109 7-96 (100)
148 3v0a_C Llama antibody F12; bot 99.7 1.5E-16 5.1E-21 105.7 8.4 95 15-109 18-130 (152)
149 3lh2_H FV 4E10 heavy chain; ep 99.7 1E-15 3.5E-20 100.3 12.4 85 9-94 6-102 (137)
150 3qyc_A VH domain of IGG molecu 99.7 2.9E-16 9.8E-21 104.0 9.7 84 10-94 7-102 (146)
151 2e7c_A Myosin-binding protein 99.7 5.3E-16 1.8E-20 97.7 10.6 86 12-109 30-116 (118)
152 3nn8_A Engineered SCFV, heavy 99.7 7.3E-16 2.5E-20 98.6 11.2 82 13-94 7-101 (122)
153 2k1m_A Myosin-binding protein 99.7 4E-16 1.4E-20 94.9 9.5 84 10-108 12-95 (95)
154 2lvc_A Obscurin-like protein 1 99.7 1.2E-16 4.2E-21 97.8 7.2 88 4-106 3-91 (91)
155 2edj_A Roundabout homolog 2; K 99.7 4.1E-16 1.4E-20 95.2 9.5 91 5-109 8-99 (100)
156 3m8o_H Immunoglobulin A1 heavy 99.7 4.8E-16 1.6E-20 106.6 10.7 97 11-107 5-118 (221)
157 1nct_A Titin; cell adhesion, g 99.7 1.8E-16 6.1E-21 98.7 7.7 91 5-107 14-105 (106)
158 1hxm_A Gamma-delta T-cell rece 99.7 7.3E-16 2.5E-20 108.1 11.8 100 9-108 4-119 (229)
159 2kkq_A Myotilin; unknown funct 99.7 4.9E-16 1.7E-20 98.1 9.9 89 12-109 21-110 (116)
160 3juy_B 3B3 single chain varian 99.7 4.5E-16 1.5E-20 109.0 10.7 106 4-109 4-134 (256)
161 1wit_A Twitchin 18TH IGSF modu 99.7 2.8E-16 9.6E-21 95.0 8.1 91 5-107 2-93 (93)
162 2edf_A Obscurin; beta-sandwich 99.7 4.4E-16 1.5E-20 95.7 8.9 90 5-109 7-96 (103)
163 2fbj_H IGA-kappa J539 FAB (hea 99.7 6.4E-16 2.2E-20 106.5 10.7 96 13-108 7-118 (220)
164 3qjh_A 5C.C7 alpha chain; immu 99.7 5.3E-16 1.8E-20 108.0 10.2 97 10-108 7-111 (205)
165 1ypz_F T-cell receptor gamma c 99.7 3.9E-16 1.3E-20 108.4 9.6 99 9-107 4-118 (230)
166 3n9g_H FAB fragment of MAB CR4 99.7 6.8E-16 2.3E-20 107.0 10.7 84 12-95 6-101 (230)
167 1mju_H Immunoglobulin MS6-12; 99.7 9.3E-16 3.2E-20 106.2 11.2 98 11-108 5-116 (227)
168 1ncn_A T lymphocyte activation 99.7 8.5E-16 2.9E-20 95.6 9.9 76 15-94 3-90 (110)
169 2dm2_A Palladin; beta-sandwich 99.7 3.5E-16 1.2E-20 97.2 8.1 95 5-109 8-103 (110)
170 1op3_H FAB 2G12, heavy chain; 99.7 1E-15 3.6E-20 105.6 11.4 96 13-108 7-123 (225)
171 1hxm_B Gamma-delta T-cell rece 99.7 8.3E-16 2.9E-20 107.3 10.6 99 10-108 5-123 (242)
172 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.7 1.4E-15 4.6E-20 106.8 11.7 100 9-108 6-116 (256)
173 2edk_A Myosin-binding protein 99.7 1.2E-16 4.1E-21 98.2 5.5 90 5-109 7-100 (101)
174 2eny_A Obscurin; beta-sandwich 99.7 2E-16 6.8E-21 98.4 6.5 88 8-109 10-98 (104)
175 2edh_A Obscurin; structural ge 99.7 1.7E-15 5.9E-20 94.5 10.9 89 4-109 18-106 (113)
176 2cr6_A KIAA1556 protein, obscu 99.7 2.6E-16 8.9E-21 98.9 7.1 92 5-109 12-103 (115)
177 3tjh_C 42F3 alpha; IG MHC, ant 99.7 6.6E-16 2.3E-20 109.0 9.9 107 3-109 1-123 (226)
178 4f9p_D 103.2 anti-BTN3A1 antib 99.7 1.4E-15 4.9E-20 108.3 11.5 85 8-94 139-228 (254)
179 3nfj_J T cell receptor beta ch 99.6 1.5E-15 5.2E-20 105.4 11.2 99 9-108 4-116 (245)
180 1fhg_A Telokin; immunoglobulin 99.6 3.5E-15 1.2E-19 98.2 12.4 94 5-109 41-135 (154)
181 1dn0_B IGM-kappa cold agglutin 99.6 1.1E-15 3.6E-20 106.4 10.3 96 13-108 7-120 (232)
182 1gxe_A Myosin binding protein 99.6 3.4E-16 1.2E-20 102.7 7.2 96 11-108 23-139 (139)
183 3gsn_A RA14 TCR alpha chain (T 99.6 3.4E-16 1.2E-20 108.5 7.3 100 10-109 4-110 (199)
184 3r0n_A Poliovirus receptor-rel 99.6 6.1E-16 2.1E-20 98.5 7.8 99 8-106 4-128 (128)
185 1q9r_B S25-2 FAB (IGG1K) heavy 99.6 1.4E-15 4.7E-20 104.2 10.0 96 13-108 7-122 (222)
186 3nl4_L Antigen binding fragmen 99.6 3.5E-15 1.2E-19 101.2 11.6 98 9-108 4-110 (213)
187 2dlt_A Myosin binding protein 99.6 5.3E-16 1.8E-20 96.0 6.9 90 5-108 8-97 (106)
188 3gkz_A Anti-methamphetamine si 99.6 1.6E-15 5.4E-20 106.1 10.1 106 4-109 6-127 (257)
189 3nl4_H Antigen binding fragmen 99.6 2.1E-15 7.3E-20 103.0 10.3 94 12-107 5-114 (215)
190 2xqy_G A13-D6.3 monoclonal ant 99.6 1.7E-15 5.9E-20 107.6 10.2 98 11-108 11-124 (261)
191 2e7b_A Obscurin; IG-like domai 99.6 7.8E-16 2.7E-20 94.5 7.3 90 4-109 7-96 (103)
192 2dm7_A KIAA1556 protein; beta- 99.6 1.3E-15 4.5E-20 94.3 8.4 89 3-108 6-94 (108)
193 3c6l_A TCR 2W20 alpha chain; T 99.4 2E-17 6.9E-22 113.4 0.0 100 10-109 4-109 (185)
194 3mlr_H Human monoclonal anti-H 99.6 7.9E-16 2.7E-20 106.6 8.1 82 13-94 7-100 (226)
195 3kvq_A Vascular endothelial gr 99.6 9.9E-16 3.4E-20 94.4 7.6 91 5-109 10-101 (108)
196 2dm3_A KIAA0992 protein, palla 99.6 7.3E-16 2.5E-20 95.4 7.0 95 4-109 8-103 (110)
197 4f9l_D 20.1 anti-BTN3A1 antibo 99.6 1.1E-15 3.9E-20 109.2 8.9 85 7-93 2-91 (259)
198 1c5d_H Monoclonal antibody aga 99.6 1.7E-15 5.9E-20 103.8 9.6 96 13-108 7-117 (215)
199 2yr3_A Myosin light chain kina 99.6 1.1E-15 3.7E-20 93.1 7.6 89 4-107 10-99 (99)
200 3umt_A SCFV heavy chain and li 99.6 2.5E-15 8.6E-20 105.2 10.4 96 13-108 9-121 (256)
201 1pz5_B Heavy chain of FAB (SYA 99.6 2.8E-15 9.5E-20 102.6 10.3 95 13-107 7-119 (220)
202 3bn9_D E2 FAB heavy chain; ant 99.6 2.8E-15 9.5E-20 106.6 10.6 83 13-95 7-101 (257)
203 3uzq_A Anti-dengue MAB 4E11; d 99.6 5.1E-15 1.7E-19 103.5 11.8 98 11-108 6-117 (253)
204 3osk_A Cytotoxic T-lymphocyte 99.6 1.6E-15 5.3E-20 98.0 8.4 94 15-110 10-120 (130)
205 2e6p_A Obscurin-like protein 1 99.6 1.5E-15 5.2E-20 93.4 8.0 90 4-108 6-97 (104)
206 3iu4_H CHP3 FAB heavy chain; a 99.6 1.3E-15 4.4E-20 108.4 8.6 82 14-95 8-100 (263)
207 1svz_A Immunoglobulin;, single 99.6 4.8E-15 1.7E-19 103.0 11.3 98 9-108 4-113 (247)
208 1c1e_H Catalytic antibody 1E9 99.6 3.2E-15 1.1E-19 102.0 10.1 96 13-108 7-119 (219)
209 3qhz_H Human monoclonal antibo 99.6 1.9E-15 6.5E-20 104.6 9.0 84 12-95 6-105 (232)
210 3liz_H 4C3 monoclonal antibody 99.6 1.8E-15 6E-20 106.4 8.8 96 12-107 6-118 (253)
211 3d9a_H Heavy chain of hyhel10 99.6 3.1E-15 1.1E-19 101.6 9.8 95 13-107 7-112 (210)
212 2ckn_A Basic fibroblast growth 99.6 2E-15 6.7E-20 91.8 7.9 85 5-106 9-94 (95)
213 4dzb_B Vbeta2 (MAIT T cell rec 99.6 6.4E-15 2.2E-19 102.1 11.4 98 10-108 5-117 (246)
214 3caf_A Fibroblast growth facto 99.6 1.5E-15 5E-20 92.6 7.2 85 13-107 15-100 (100)
215 2dku_A KIAA1556 protein; beta- 99.6 2.8E-15 9.6E-20 92.0 8.4 89 5-109 8-96 (103)
216 3omz_A Human vdelta1 gamma del 99.6 1.5E-15 5.2E-20 106.5 8.0 100 10-109 6-119 (259)
217 3bae_H WO2 IGG2A FAB fragment 99.6 3.7E-15 1.3E-19 103.0 9.8 82 13-94 7-101 (228)
218 2znx_A SCFV; fluorotryptohpan, 99.6 8.4E-15 2.9E-19 102.0 11.6 98 9-108 4-108 (242)
219 3sob_H Antibody heavy chain, l 99.6 3.1E-15 1.1E-19 105.2 9.5 81 14-94 31-123 (256)
220 2pnd_A V-SET and immunoglobuli 99.6 2.5E-15 8.7E-20 95.2 8.1 94 13-107 8-118 (119)
221 3s96_B 3B5H10 FAB light chain; 99.6 5.7E-15 2E-19 100.3 10.4 96 10-108 5-116 (218)
222 3fku_X Neutralizing antibody F 99.6 2.1E-15 7.1E-20 107.6 8.5 96 13-108 7-124 (280)
223 4ei6_B Vbeta16 XV19 type II na 99.6 8.8E-15 3E-19 101.4 11.4 98 9-108 5-116 (245)
224 4hwu_A Fibroblast growth facto 99.6 7.4E-15 2.5E-19 89.0 9.4 84 10-110 5-89 (95)
225 2gjj_A A21 single-chain antibo 99.6 1E-14 3.6E-19 103.2 11.6 98 9-108 8-118 (264)
226 2eo9_A Roundabout homolog 1; b 99.6 1.2E-15 4.2E-20 95.9 5.9 91 5-109 8-99 (118)
227 3tv3_H PGT128 heavy chain, IG 99.6 3.6E-15 1.2E-19 104.1 8.9 82 13-94 7-107 (239)
228 3q5y_A TCR N15 beta; IG, T cel 99.6 1E-14 3.5E-19 100.9 11.0 97 10-108 6-114 (240)
229 3sob_L Antibody light chain; b 99.6 1.5E-14 5.2E-19 99.1 11.7 98 9-108 27-131 (237)
230 3d9a_L Light chain of hyhel10 99.6 1.5E-14 5.2E-19 98.0 11.6 98 9-108 4-108 (213)
231 3u2s_H PG9 heavy chain; greek 99.6 2.7E-15 9.4E-20 105.8 8.1 82 13-94 6-99 (248)
232 1moe_A Anti-CEA MAB T84.66; an 99.6 1E-14 3.6E-19 100.6 10.8 98 10-109 5-113 (240)
233 2cpc_A KIAA0657 protein; immun 99.6 2.8E-14 9.7E-19 88.7 11.8 79 16-109 23-101 (113)
234 2wbj_D OB TCR; transmembrane, 99.6 8.7E-15 3E-19 104.0 10.7 85 9-94 27-121 (279)
235 3auv_A SC-DSFV derived from th 99.6 7.4E-15 2.5E-19 104.2 10.2 98 9-108 15-119 (276)
236 3esu_F Antibody 14B7* light ch 99.6 4.8E-15 1.7E-19 103.0 8.9 97 10-108 8-111 (250)
237 4fa8_A Secreted protein BARF1; 99.6 5.2E-15 1.8E-19 101.9 8.9 93 14-108 1-105 (203)
238 1qok_A MFE-23 recombinant anti 99.6 1.8E-14 6.3E-19 102.6 12.0 99 10-108 30-146 (282)
239 1x9q_A SCFV, 4M5.3 anti-fluore 99.6 9.8E-15 3.4E-19 103.0 10.5 98 9-108 18-127 (268)
240 3r06_A Anti-mouse CD3epsilon a 99.6 1.3E-14 4.5E-19 98.3 10.7 96 9-106 4-106 (213)
241 1bec_A 14.3.D T cell antigen r 99.6 2.1E-14 7.1E-19 99.8 11.8 97 10-108 3-113 (238)
242 1nqb_A Single-chain antibody f 99.6 1.5E-14 5E-19 101.9 11.0 98 11-108 5-120 (256)
243 2ghw_B Anti-SARS SCFV antibody 99.6 1E-14 3.5E-19 101.2 9.9 95 14-108 10-119 (247)
244 3mj8_L Stimulatory hamster ant 99.6 1.2E-14 4.1E-19 98.5 9.9 92 15-108 9-109 (213)
245 2dru_A Chimera of CD48 antigen 99.6 1.1E-14 3.7E-19 98.2 9.5 95 11-109 4-105 (180)
246 2wv3_A Neuroplastin; igcam, me 99.6 1.1E-13 3.7E-18 92.4 14.3 96 5-107 92-189 (190)
247 3ux9_B SCFV antibody; five hel 99.6 5.7E-15 1.9E-19 103.1 8.2 95 13-109 9-114 (256)
248 3umt_A SCFV heavy chain and li 99.6 8.4E-15 2.9E-19 102.5 9.1 101 8-110 140-247 (256)
249 3qib_D 2B4 beta chain; IG doma 99.6 1.5E-14 5.2E-19 101.9 10.5 97 10-108 31-141 (270)
250 3pl6_D MBP peptide / T-cell re 99.6 1.9E-14 6.5E-19 101.2 10.9 96 11-108 31-138 (268)
251 2e6q_A Obscurin-like protein 1 99.6 3.5E-14 1.2E-18 90.2 11.0 100 3-110 5-107 (112)
252 3to4_D NKT vbeta2 (mouse varia 99.6 8.9E-15 3.1E-19 102.5 9.0 97 9-108 4-116 (253)
253 1lk3_L 9D7 light chain; antige 99.6 2.6E-14 8.9E-19 96.9 11.0 94 13-108 7-107 (210)
254 1za6_B IGG heavy chain; immuno 99.6 2.7E-14 9.1E-19 103.9 11.6 97 12-108 6-115 (344)
255 3lcy_A Titin; A-BAND, IG tande 99.6 5E-14 1.7E-18 93.6 11.9 96 2-109 4-100 (197)
256 3uzq_A Anti-dengue MAB 4E11; d 99.6 2.7E-14 9.3E-19 99.7 10.9 102 8-111 135-247 (253)
257 3bkj_L WO2 IGG2A FAB fragment 99.6 3.7E-14 1.3E-18 99.0 11.4 97 10-108 38-146 (252)
258 1ymm_D T cell receptor alpha c 99.6 5.3E-17 1.8E-21 112.5 -3.1 99 10-109 5-113 (207)
259 2znx_A SCFV; fluorotryptohpan, 99.6 3E-14 1E-18 99.2 10.8 95 15-109 131-236 (242)
260 2ghw_B Anti-SARS SCFV antibody 99.6 2.8E-14 9.6E-19 98.9 10.5 97 10-108 139-242 (247)
261 2cry_A KIN of IRRE-like protei 99.6 1.1E-15 3.7E-20 96.8 2.9 99 3-110 12-115 (122)
262 2cr3_A Basic fibroblast growth 99.6 9.4E-15 3.2E-19 89.5 7.1 82 13-110 10-92 (99)
263 3s35_X Vascular endothelial gr 99.6 2.8E-14 9.5E-19 89.8 9.4 96 12-111 14-113 (122)
264 2p1y_A Bispecific alpha/beta T 99.6 2.3E-14 7.9E-19 98.7 9.8 85 10-94 131-220 (238)
265 1wwb_X Protein (brain derived 99.6 5.5E-14 1.9E-18 87.0 10.5 95 2-109 1-99 (103)
266 3gkz_A Anti-methamphetamine si 99.6 3.8E-14 1.3E-18 99.0 10.9 102 7-110 142-251 (257)
267 1f3r_B FV antibody fragment; I 99.6 2.7E-14 9.1E-19 100.2 10.1 82 14-95 8-100 (257)
268 2eo1_A OBSCN protein, cDNA FLJ 99.6 8.8E-15 3E-19 89.6 6.6 81 14-109 19-99 (102)
269 2zg1_A Sialic acid-binding IG- 99.6 6.7E-15 2.3E-19 99.7 6.4 99 10-108 4-122 (214)
270 3u1s_H FAB PGT145 heavy chain; 99.6 2E-14 6.9E-19 102.1 9.2 80 14-93 31-122 (267)
271 2j8h_A Titin, connectin; cardi 99.5 8.3E-14 2.8E-18 93.0 11.6 95 4-108 3-98 (197)
272 3ux9_B SCFV antibody; five hel 99.5 5.2E-14 1.8E-18 98.2 11.0 82 14-95 142-235 (256)
273 2p1y_A Bispecific alpha/beta T 99.5 4.1E-14 1.4E-18 97.4 10.3 83 10-94 4-94 (238)
274 2r15_A Myomesin-1; sarcomeric 99.5 1.6E-13 5.5E-18 92.4 13.0 93 6-108 117-210 (212)
275 2gki_A Nuclease; anti-DNA anti 99.5 1.7E-14 5.9E-19 103.3 8.6 97 12-108 28-142 (291)
276 2c1o_A IGK-C protein; FAB frag 99.5 6.3E-14 2.2E-18 97.5 11.2 98 9-108 41-150 (254)
277 3juy_B 3B3 single chain varian 99.5 5.8E-14 2E-18 98.2 11.0 98 8-107 151-256 (256)
278 2jll_A NCAM2, neural cell adhe 99.5 1.2E-13 4E-18 100.8 13.0 92 13-108 7-99 (389)
279 2pkd_A SLAM family member 5; s 99.5 6.1E-15 2.1E-19 93.3 5.1 91 12-108 5-110 (111)
280 1iga_A IGA1; immunoglobulin; N 99.5 5.4E-14 1.9E-18 106.3 11.2 97 12-108 7-122 (475)
281 3esu_F Antibody 14B7* light ch 99.5 3.1E-14 1.1E-18 98.8 9.2 83 12-94 137-231 (250)
282 3rbs_A Myomesin-1; immunoglobu 99.5 4.4E-14 1.5E-18 97.1 9.8 81 15-108 125-207 (207)
283 1qok_A MFE-23 recombinant anti 99.5 2E-14 6.8E-19 102.4 8.2 98 10-110 166-270 (282)
284 2gjj_A A21 single-chain antibo 99.5 9.2E-14 3.2E-18 98.3 11.6 98 15-112 147-262 (264)
285 2yd1_A Tyrosine-protein phosph 99.5 2.5E-13 8.5E-18 92.2 13.2 95 5-109 6-103 (212)
286 1q0x_L FAB 9B1, light chain; a 99.5 3.5E-14 1.2E-18 96.3 9.0 93 13-107 7-109 (212)
287 3tf7_C 42F3 MUT7 SCFV (42F3 al 99.5 8.6E-14 2.9E-18 97.6 11.2 101 9-111 140-251 (256)
288 3tv3_L PGT128 light chain, IG 99.5 3.4E-14 1.2E-18 96.2 8.9 90 15-108 9-106 (211)
289 1zvo_C Myeloma immunoglobulin 99.5 4.8E-14 1.6E-18 108.3 10.7 84 12-95 6-102 (512)
290 3b5h_A Cervical EMMPRIN, HAB18 99.5 7.7E-14 2.6E-18 92.5 10.4 88 14-108 91-183 (184)
291 1f3r_B FV antibody fragment; I 99.5 5.8E-15 2E-19 103.6 5.0 100 10-111 143-248 (257)
292 2edo_A CD48 antigen; beta-sand 99.5 2.6E-15 9E-20 95.8 2.8 92 15-110 13-112 (121)
293 3auv_A SC-DSFV derived from th 99.5 8.6E-14 3E-18 98.7 10.7 97 13-109 141-255 (276)
294 3so5_A LIG-3, leucine-rich rep 99.5 1.5E-13 5E-18 84.1 10.3 98 5-106 9-111 (112)
295 1nqb_A Single-chain antibody f 99.5 5.6E-14 1.9E-18 98.9 9.4 97 11-109 126-234 (256)
296 3omz_A Human vdelta1 gamma del 99.5 2.9E-14 9.8E-19 99.9 7.8 103 9-111 139-253 (259)
297 2v9t_A Roundabout homolog 1; s 99.5 2.6E-14 9E-19 89.5 6.8 101 4-113 8-114 (117)
298 1oga_E TRBC1, T-cell receptor 99.5 8E-14 2.7E-18 97.7 10.0 98 9-108 6-115 (252)
299 3jz7_A MCAR, CAR, coxsackievir 99.5 3.8E-14 1.3E-18 95.1 8.0 97 13-109 7-121 (214)
300 2rik_A Titin; I-SET IG fold, p 99.5 1.9E-13 6.4E-18 95.9 11.9 92 6-108 5-97 (284)
301 3oai_A Maltose-binding peripla 99.5 7.1E-14 2.4E-18 106.2 10.1 98 10-107 389-504 (507)
302 2gki_A Nuclease; anti-DNA anti 99.5 1.2E-13 4E-18 99.0 10.6 99 10-110 163-274 (291)
303 3sbw_C Programmed cell death 1 99.5 1.4E-13 4.7E-18 93.4 10.4 95 14-109 9-116 (222)
304 2yd6_A PTPRD protein; hydrolas 99.5 3.5E-13 1.2E-17 91.6 12.4 95 4-109 5-101 (212)
305 1hzh_H IGG, immunoglobulin hea 99.5 1.1E-13 3.7E-18 103.9 10.7 83 13-95 7-101 (457)
306 2qsq_A Carcinoembryonic antige 99.5 1E-13 3.5E-18 87.7 8.9 89 16-109 10-110 (111)
307 1moe_A Anti-CEA MAB T84.66; an 99.5 2E-13 7E-18 94.0 11.0 86 8-93 121-218 (240)
308 2v44_A NCAM2, neural cell adhe 99.5 3.1E-13 1.1E-17 89.8 11.2 89 10-109 6-96 (189)
309 2va4_A NCAM2, N-CAM 2, neural 99.5 7.9E-14 2.7E-18 92.4 8.2 91 5-108 2-94 (192)
310 4fmk_A Poliovirus receptor-rel 99.5 1.3E-13 4.3E-18 92.7 9.3 87 8-94 3-104 (225)
311 1epf_A NCAM, protein (neural c 99.5 3.3E-13 1.1E-17 89.7 11.1 90 11-108 7-99 (191)
312 2xzc_L FAB A.17 light chain; i 99.5 1.1E-13 3.7E-18 94.2 8.9 93 13-107 7-109 (216)
313 4f80_A Butyrophilin subfamily 99.5 3E-13 1E-17 92.7 11.2 93 14-106 12-117 (226)
314 3bp6_B Programmed cell death 1 99.5 1.6E-13 5.3E-18 92.4 9.5 89 13-109 9-104 (202)
315 2vsd_A CHIR AB1; immune system 99.5 6.1E-14 2.1E-18 87.3 6.9 93 5-113 4-101 (105)
316 1ccz_A Protein (CD58); LFA-3, 99.5 2.1E-14 7.3E-19 96.1 5.1 90 13-109 2-95 (171)
317 2y25_A Myomesin; structural pr 99.5 4.1E-13 1.4E-17 95.2 12.0 93 6-108 222-315 (317)
318 3qr2_A Basigin; CD147, EMMPRIN 99.5 5E-13 1.7E-17 85.9 11.3 89 4-94 20-111 (137)
319 2a38_A Titin; Z1Z2, structural 99.5 1.9E-13 6.5E-18 90.9 9.6 97 2-108 2-99 (194)
320 3bfo_A Mucosa-associated lymph 99.5 2.2E-13 7.7E-18 81.8 8.9 79 10-108 7-87 (91)
321 1igt_B IGG2A intact antibody - 99.5 2.2E-13 7.7E-18 101.8 10.6 96 13-108 7-118 (444)
322 1he7_A High affinity nerve gro 99.5 3.5E-13 1.2E-17 87.3 10.2 81 20-109 14-100 (126)
323 2va4_A NCAM2, N-CAM 2, neural 99.5 3.8E-13 1.3E-17 89.1 10.6 89 15-107 103-192 (192)
324 2yd9_A Receptor-type tyrosine- 99.5 5.2E-13 1.8E-17 94.9 11.8 94 5-109 6-101 (304)
325 2id5_A Lingo-1, leucine rich r 99.5 5.3E-14 1.8E-18 106.4 6.9 92 6-108 385-477 (477)
326 1yjd_C TP44, T-cell-specific s 99.5 2.7E-13 9.1E-18 89.4 9.4 98 10-109 8-122 (140)
327 1svz_A Immunoglobulin;, single 99.5 3.1E-13 1E-17 93.8 9.9 80 15-94 136-227 (247)
328 1f97_A Junction adhesion molec 99.5 6.3E-13 2.2E-17 89.1 11.2 94 10-109 5-104 (212)
329 3fku_X Neutralizing antibody F 99.5 4.4E-14 1.5E-18 100.7 5.8 91 16-108 149-250 (280)
330 3pv7_A B7-H6, IG-like domain-c 99.5 5.2E-14 1.8E-18 97.6 5.8 101 7-108 4-118 (248)
331 2a38_A Titin; Z1Z2, structural 99.5 3.4E-13 1.2E-17 89.6 9.6 85 12-107 109-194 (194)
332 3mtr_A N-CAM-1, NCAM-1, neural 99.5 4.3E-13 1.5E-17 91.3 10.1 93 5-108 19-112 (215)
333 2y23_A Myomesin; structural pr 99.5 7.6E-13 2.6E-17 93.6 11.7 80 16-108 231-312 (312)
334 3rbs_A Myomesin-1; immunoglobu 99.5 7.4E-13 2.5E-17 91.0 11.2 82 13-104 9-91 (207)
335 2if7_A SLAM family member 6; N 99.5 1.1E-13 3.6E-18 93.8 6.8 92 12-109 4-107 (193)
336 2wng_A Tyrosine-protein phosph 99.5 1.2E-13 4.2E-18 99.2 7.4 99 8-108 5-115 (327)
337 2nzi_A Titin; IG-domain, FNIII 99.5 7.2E-13 2.5E-17 93.8 11.3 95 4-108 3-98 (305)
338 2j8h_A Titin, connectin; cardi 99.5 4.6E-13 1.6E-17 89.3 9.6 84 14-108 112-197 (197)
339 3bqu_C 3H6 FAB light chain; be 99.5 1.6E-14 5.5E-19 99.2 2.4 83 10-94 27-114 (233)
340 2ens_A Advanced glycosylation 99.5 4.5E-14 1.5E-18 85.7 4.1 80 9-108 13-95 (96)
341 1nfd_E H57 FAB; complex (immun 99.5 1.1E-13 3.6E-18 93.9 6.2 79 13-93 6-89 (212)
342 4fqp_A Poliovirus receptor; im 99.5 2.9E-13 9.9E-18 96.7 8.8 101 8-108 2-116 (313)
343 1nbq_A JAM, junctional adhesio 99.4 2E-13 6.9E-18 91.4 7.3 97 7-109 5-107 (209)
344 2j6e_L IGM, FAB light chain; a 99.4 1E-13 3.5E-18 95.1 5.8 93 13-107 26-129 (234)
345 2fbo_J V1V2;, variable region- 99.4 4.1E-13 1.4E-17 92.4 8.8 95 12-109 8-132 (250)
346 1hng_A CD2; T lymphocyte adhes 99.4 2.1E-13 7.1E-18 91.3 7.0 89 15-109 5-100 (176)
347 1rhf_A Tyrosine-protein kinase 99.4 7.3E-13 2.5E-17 87.5 9.5 90 10-108 6-97 (182)
348 1wwc_A Protein (NT-3 growth fa 99.4 1.2E-12 4.2E-17 82.1 9.7 94 3-109 6-102 (118)
349 2x1w_L Vascular endothelial gr 99.4 2E-12 6.7E-17 88.2 11.5 98 8-111 107-210 (213)
350 1x9q_A SCFV, 4M5.3 anti-fluore 99.4 9.2E-13 3.1E-17 92.9 10.0 82 13-94 158-253 (268)
351 2rik_A Titin; I-SET IG fold, p 99.4 3.4E-12 1.1E-16 89.5 12.3 95 4-109 97-192 (284)
352 3lcy_A Titin; A-BAND, IG tande 99.4 1.8E-12 6.2E-17 85.9 10.4 86 13-109 110-197 (197)
353 3eow_R Poliovirus receptor; im 99.4 1.6E-13 5.6E-18 93.6 5.4 97 12-108 5-115 (221)
354 4fa8_A Secreted protein BARF1; 99.4 3.7E-13 1.3E-17 92.6 7.2 87 6-99 106-193 (203)
355 4frw_A Poliovirus receptor-rel 99.4 1.4E-12 4.6E-17 87.2 9.7 83 12-94 5-100 (218)
356 3mj6_A Junctional adhesion mol 99.4 4.3E-13 1.5E-17 93.5 7.5 96 12-107 11-121 (268)
357 2iep_A Muscle-specific kinase 99.4 1.5E-12 5.2E-17 86.3 9.7 91 5-108 7-99 (192)
358 1qz1_A Neural cell adhesion mo 99.4 2.5E-12 8.7E-17 90.2 11.3 90 11-108 7-99 (291)
359 3kld_A Contactin 4, axcam, BIG 99.4 1.3E-12 4.5E-17 96.2 9.9 81 13-108 302-383 (384)
360 1vca_A VCAM-D1,2, human vascul 99.4 2.5E-12 8.5E-17 87.7 10.5 80 16-109 11-91 (202)
361 2yd6_A PTPRD protein; hydrolas 99.4 2.2E-12 7.7E-17 87.5 10.2 93 12-112 114-208 (212)
362 3zyj_A Leucine-rich repeat-con 99.4 1.5E-12 5.1E-17 98.0 10.2 90 11-111 346-436 (440)
363 2v5t_A NCAM2, N-CAM 2, neural 99.4 7.9E-13 2.7E-17 87.3 7.6 80 15-107 107-187 (189)
364 1hnf_A CD2; T lymphocyte adhes 99.4 9.2E-13 3.1E-17 89.4 8.0 92 13-109 6-105 (182)
365 2rcj_C Light chain; immunoglob 99.4 1.7E-12 5.7E-17 98.7 10.4 94 13-108 7-109 (523)
366 3s97_C Contactin-1; carbonic a 99.4 1E-12 3.4E-17 87.5 7.9 79 15-108 122-201 (201)
367 2v44_A NCAM2, neural cell adhe 99.4 3.1E-12 1.1E-16 84.9 10.3 74 13-98 103-177 (189)
368 3mjg_X Beta-type platelet-deri 99.4 2.6E-12 9E-17 90.4 10.5 89 14-112 189-282 (289)
369 2ny1_B T-cell surface glycopro 99.4 6.6E-13 2.3E-17 88.2 6.9 91 14-107 3-99 (184)
370 3grw_A Fibroblast growth facto 99.4 4.6E-13 1.6E-17 91.9 6.2 98 7-109 115-219 (241)
371 1igy_B IGG1 intact antibody MA 99.4 1.3E-13 4.6E-18 102.8 3.3 96 13-108 6-114 (434)
372 1qgc_4 Protein (immunoglobulin 99.4 3.8E-12 1.3E-16 94.3 11.1 82 13-94 225-318 (438)
373 2yd1_A Tyrosine-protein phosph 99.4 2.7E-12 9.4E-17 86.9 9.3 85 12-110 116-202 (212)
374 1qz1_A Neural cell adhesion mo 99.4 1.2E-12 4E-17 92.0 7.6 86 15-109 205-291 (291)
375 2wv3_A Neuroplastin; igcam, me 99.4 2.4E-12 8.3E-17 85.7 8.7 86 5-108 3-91 (190)
376 1cs6_A Axonin-1; neural cell a 99.4 4.1E-12 1.4E-16 92.6 10.6 81 13-108 301-382 (382)
377 2ocw_A Polymeric-immunoglobuli 99.4 5.4E-12 1.8E-16 96.8 11.3 98 12-109 6-112 (585)
378 3u83_A Poliovirus receptor-rel 99.4 1.2E-12 4.1E-17 93.6 7.2 105 4-109 12-130 (331)
379 3b43_A Titin; I-SET IG fold, e 99.4 5.8E-12 2E-16 97.3 11.5 94 3-108 3-97 (570)
380 3zyi_A Leucine-rich repeat-con 99.4 6.5E-13 2.2E-17 100.3 6.0 89 11-111 357-446 (452)
381 4f9l_D 20.1 anti-BTN3A1 antibo 99.4 4.9E-12 1.7E-16 90.4 10.1 76 17-92 142-229 (259)
382 2pet_A Lutheran blood group gl 99.4 8.7E-13 3E-17 89.8 6.1 94 11-109 5-115 (231)
383 2y25_A Myomesin; structural pr 99.4 5.7E-12 2E-16 89.3 10.4 81 15-108 15-97 (317)
384 2wim_A N-CAM 2, NCAM2, neural 99.4 5.9E-12 2E-16 88.4 10.3 88 11-109 9-98 (291)
385 2ny1_B T-cell surface glycopro 99.4 4.1E-12 1.4E-16 84.4 9.0 77 13-110 104-181 (184)
386 2c5d_C AXL oncogene, tyrosine- 99.4 5.5E-12 1.9E-16 84.2 9.7 91 11-108 7-105 (195)
387 2xot_A Amphoterin-induced prot 99.4 1.9E-12 6.5E-17 95.5 8.1 84 13-108 253-337 (361)
388 2wim_A N-CAM 2, NCAM2, neural 99.4 1.5E-12 5.1E-17 91.4 7.1 83 15-110 203-286 (291)
389 1bih_A Hemolin; insect immunit 99.4 3.6E-12 1.2E-16 92.9 9.3 86 5-106 308-394 (395)
390 2o26_X MAST/stem cell growth f 99.4 9.6E-12 3.3E-16 87.6 11.2 89 14-109 196-289 (290)
391 1qgc_4 Protein (immunoglobulin 99.4 5.2E-12 1.8E-16 93.5 10.2 98 9-108 4-112 (438)
392 1f97_A Junction adhesion molec 99.3 1.9E-12 6.5E-17 86.8 6.7 90 16-110 114-209 (212)
393 3ojm_B Fibroblast growth facto 99.3 3.9E-12 1.3E-16 86.3 8.3 85 14-108 27-112 (231)
394 2v5t_A NCAM2, N-CAM 2, neural 99.3 6.6E-12 2.3E-16 82.8 9.1 85 11-107 7-94 (189)
395 2y23_A Myomesin; structural pr 99.3 2.7E-11 9.4E-16 85.5 12.7 81 5-94 106-187 (312)
396 3p2t_A Leukocyte immunoglobuli 99.3 9.1E-12 3.1E-16 83.7 9.7 90 5-108 4-96 (196)
397 2fbo_J V1V2;, variable region- 99.3 3.5E-12 1.2E-16 87.7 7.8 96 6-106 136-250 (250)
398 4fom_A Poliovirus receptor-rel 99.3 3.6E-12 1.2E-16 90.5 8.0 93 14-107 7-110 (308)
399 2vr9_A Roundabout 1, ROBO; imm 99.3 1.9E-12 6.6E-17 87.6 6.3 87 14-107 116-206 (217)
400 3b43_A Titin; I-SET IG fold, e 99.3 1.3E-11 4.6E-16 95.3 11.7 94 4-108 289-383 (570)
401 4i0k_A CD276 antigen; immunogl 99.3 4.2E-13 1.4E-17 91.2 2.9 95 14-108 3-107 (222)
402 4f9p_D 103.2 anti-BTN3A1 antib 99.3 4.9E-12 1.7E-16 90.1 8.4 82 11-93 6-99 (254)
403 1gsm_A Madcam-1, mucosal addre 99.3 2E-11 6.8E-16 85.1 11.4 80 13-109 14-96 (210)
404 3f8u_B Tapasin; endoplasmic re 99.3 1.4E-11 4.6E-16 93.3 10.9 95 14-108 166-290 (401)
405 3r4d_A CEA-related cell adhesi 99.3 8.6E-12 2.9E-16 83.7 8.9 90 15-109 8-109 (208)
406 3sgj_C Human FCG3A receptor; r 99.3 6.3E-12 2.2E-16 85.8 8.3 83 4-108 5-88 (204)
407 3ojm_B Fibroblast growth facto 99.3 2.2E-12 7.6E-17 87.5 5.8 94 11-109 123-222 (231)
408 3ejj_X Macrophage colony-stimu 99.3 5.3E-12 1.8E-16 88.5 7.7 87 3-109 1-88 (289)
409 2iep_A Muscle-specific kinase 99.3 6.9E-12 2.4E-16 83.1 7.8 82 13-108 107-190 (192)
410 3grw_A Fibroblast growth facto 99.3 1E-11 3.5E-16 85.1 8.9 86 13-108 22-108 (241)
411 1ugn_A LIR1, leukocyte immunog 99.3 9E-12 3.1E-16 83.8 8.5 83 16-108 110-198 (198)
412 2r15_A Myomesin-1; sarcomeric 99.3 1.8E-11 6E-16 82.3 9.9 89 8-107 3-94 (212)
413 3kld_A Contactin 4, axcam, BIG 99.3 1.1E-11 3.8E-16 91.2 9.5 88 7-108 206-294 (384)
414 4fqp_A Poliovirus receptor; im 99.3 1.4E-11 4.6E-16 88.0 9.6 88 5-109 216-305 (313)
415 3mj6_A Junctional adhesion mol 99.3 5.1E-12 1.7E-16 88.0 7.2 97 12-108 124-237 (268)
416 1dr9_A B7-1 (CD80), T lymphocy 99.3 5E-12 1.7E-16 84.9 6.8 91 15-109 3-107 (201)
417 2v9r_A Roundabout homolog 1; p 99.3 6.1E-12 2.1E-16 84.4 7.2 83 13-109 118-203 (212)
418 2gi7_A GPVI protein; IG-like d 99.3 8.7E-12 3E-16 83.3 7.9 81 5-108 7-90 (184)
419 3ejj_X Macrophage colony-stimu 99.3 6.3E-11 2.1E-15 83.0 12.6 88 14-110 194-283 (289)
420 1itb_B Type 1 interleukin-1 re 99.3 1.3E-11 4.3E-16 87.8 8.9 101 5-108 208-314 (315)
421 1fnl_A Low affinity immunoglob 99.3 7.7E-12 2.6E-16 82.8 7.2 82 4-107 5-87 (175)
422 1epf_A NCAM, protein (neural c 99.3 5.5E-12 1.9E-16 83.6 6.6 70 13-94 107-176 (191)
423 3laf_A Deleted in colorectal c 99.3 1.3E-11 4.6E-16 90.1 9.2 84 12-109 318-402 (403)
424 3jz7_A MCAR, CAR, coxsackievir 99.3 7.4E-12 2.5E-16 83.8 7.1 79 17-108 132-212 (214)
425 2d3v_A Leukocyte immunoglobuli 99.3 2.7E-11 9.3E-16 81.4 9.8 90 5-108 4-96 (196)
426 1xau_A B- and T-lymphocyte att 99.3 2.1E-11 7.3E-16 77.2 8.3 93 14-109 22-117 (122)
427 2ocw_A Polymeric-immunoglobuli 99.3 3.7E-11 1.3E-15 92.1 11.3 96 13-108 338-441 (585)
428 2ifg_A High affinity nerve gro 99.3 2.1E-11 7.1E-16 88.8 9.5 83 17-108 257-345 (347)
429 2vr9_A Roundabout 1, ROBO; imm 99.3 9.3E-12 3.2E-16 84.2 6.8 82 5-94 9-90 (217)
430 3r08_E T-cell surface glycopro 99.3 5.4E-13 1.8E-17 80.5 0.5 71 13-108 6-77 (82)
431 1ry7_B FGFR-3, fibroblast grow 99.3 4.2E-12 1.4E-16 91.0 5.3 93 12-109 228-328 (334)
432 4i0k_A CD276 antigen; immunogl 99.3 4.4E-11 1.5E-15 81.1 9.9 89 15-111 119-209 (222)
433 3uto_A Twitchin; kinase, muscl 99.3 4.3E-11 1.5E-15 93.8 11.2 84 13-107 489-573 (573)
434 2x1w_L Vascular endothelial gr 99.3 9.5E-12 3.3E-16 84.8 6.6 84 12-108 13-101 (213)
435 3p3y_A Neurofascin; IG domains 99.3 3E-11 1E-15 88.2 9.7 85 12-108 318-403 (404)
436 1wio_A CD4, T-cell surface gly 99.3 8.8E-12 3E-16 90.8 6.6 91 15-108 3-99 (363)
437 3k0w_A Mucosa-associated lymph 99.3 4.2E-11 1.5E-15 81.7 9.7 80 9-108 21-102 (218)
438 3k0w_A Mucosa-associated lymph 99.3 3.7E-11 1.3E-15 82.0 9.3 80 10-109 122-203 (218)
439 1oll_A NK receptor; immune sys 99.3 5.6E-11 1.9E-15 79.6 9.9 91 4-108 2-95 (188)
440 4dep_C Interleukin-1 receptor 99.3 1.2E-11 4E-16 89.2 6.9 88 13-108 14-115 (349)
441 3o4o_C Interleukin-1 receptor 99.2 6.2E-12 2.1E-16 90.4 5.4 93 6-109 18-118 (339)
442 2nzi_A Titin; IG-domain, FNIII 99.2 7.2E-11 2.5E-15 83.4 10.7 85 14-109 112-198 (305)
443 3u83_A Poliovirus receptor-rel 99.2 2E-11 6.7E-16 87.2 7.8 89 5-110 231-322 (331)
444 3r4d_A CEA-related cell adhesi 99.2 3.6E-11 1.2E-15 80.6 8.6 79 18-110 122-202 (208)
445 1oll_A NK receptor; immune sys 99.2 3.5E-11 1.2E-15 80.6 8.3 78 15-108 107-188 (188)
446 1nkr_A P58-CL42 KIR; inhibitor 99.2 1.1E-10 3.9E-15 78.7 10.4 92 5-108 7-104 (201)
447 3qs7_E FL cytokine receptor; i 99.2 7E-11 2.4E-15 88.9 10.1 82 14-107 56-138 (423)
448 1f2q_A High affinity immunoglo 99.2 1.6E-11 5.6E-16 81.1 5.6 81 5-107 3-84 (176)
449 2v5m_A Dscam; neurobiology SPL 99.2 1.3E-10 4.5E-15 84.6 10.7 73 13-106 314-387 (388)
450 1uct_A Immunoglobulin alpha FC 99.2 2.5E-11 8.6E-16 83.8 6.4 90 5-108 8-102 (218)
451 1wio_A CD4, T-cell surface gly 99.2 6.2E-11 2.1E-15 86.2 8.8 92 14-107 184-292 (363)
452 4frw_A Poliovirus receptor-rel 99.2 3.7E-10 1.3E-14 75.2 11.9 93 8-110 120-215 (218)
453 2v5m_A Dscam; neurobiology SPL 99.2 3.8E-11 1.3E-15 87.4 7.4 87 14-109 220-307 (388)
454 3ry4_A Low affinity immunoglob 99.2 5.7E-11 2E-15 77.6 7.5 83 4-108 2-85 (170)
455 3p3y_A Neurofascin; IG domains 99.2 2E-11 6.8E-16 89.1 5.8 95 4-109 15-115 (404)
456 3p2t_A Leukocyte immunoglobuli 99.2 3.8E-11 1.3E-15 80.6 6.6 81 17-108 110-196 (196)
457 1uct_A Immunoglobulin alpha FC 99.2 3.5E-11 1.2E-15 83.0 6.5 81 15-110 114-200 (218)
458 3laf_A Deleted in colorectal c 99.2 1.4E-10 4.7E-15 84.7 9.8 84 12-108 227-311 (403)
459 2ec8_A MAST/stem cell growth f 99.2 1.2E-10 4E-15 88.5 9.7 88 14-109 321-412 (524)
460 2c5d_C AXL oncogene, tyrosine- 99.2 2E-10 6.8E-15 76.5 9.7 77 12-106 112-191 (195)
461 1nbq_A JAM, junctional adhesio 99.2 2.9E-12 1E-16 85.6 0.7 87 15-107 116-208 (209)
462 3o3u_N Maltose-binding peripla 99.2 2.6E-11 8.9E-16 93.3 6.1 92 12-108 372-469 (581)
463 2yd9_A Receptor-type tyrosine- 99.2 7.9E-11 2.7E-15 83.5 8.2 83 13-112 212-295 (304)
464 1fnl_A Low affinity immunoglob 99.2 5.2E-11 1.8E-15 78.7 6.7 75 16-109 98-175 (175)
465 1bih_A Hemolin; insect immunit 99.2 1.6E-10 5.3E-15 84.2 9.8 87 13-108 219-307 (395)
466 3s97_C Contactin-1; carbonic a 99.2 1.6E-11 5.4E-16 81.6 4.0 75 9-94 11-87 (201)
467 4fom_A Poliovirus receptor-rel 99.2 1.3E-11 4.3E-16 87.7 3.7 90 5-110 211-302 (308)
468 3qs7_E FL cytokine receptor; i 99.2 2.6E-10 9E-15 85.8 11.2 86 14-109 235-324 (423)
469 2v9r_A Roundabout homolog 1; p 99.2 2.5E-11 8.4E-16 81.4 5.0 96 5-108 9-109 (212)
470 4hwn_A FC receptor-like A; FCR 99.2 9.8E-11 3.4E-15 73.0 7.3 87 5-111 7-102 (108)
471 2ec8_A MAST/stem cell growth f 99.2 5.2E-10 1.8E-14 84.9 12.5 91 12-109 217-310 (524)
472 4dkd_C Macrophage colony-stimu 99.2 2E-10 6.9E-15 80.5 9.4 91 12-111 192-284 (292)
473 3sgj_C Human FCG3A receptor; r 99.2 8.8E-11 3E-15 80.1 7.2 75 16-109 98-175 (204)
474 1ugn_A LIR1, leukocyte immunog 99.2 1.7E-11 6E-16 82.4 3.6 90 5-108 4-97 (198)
475 4dkd_C Macrophage colony-stimu 99.2 2.7E-11 9.3E-16 85.0 4.7 91 4-108 87-181 (292)
476 3oq3_B IFN-alpha/beta binding 99.2 5.4E-11 1.8E-15 85.8 6.3 79 17-109 139-225 (329)
477 3oq3_B IFN-alpha/beta binding 99.1 4E-10 1.4E-14 81.2 10.4 88 12-107 234-329 (329)
478 2d3v_A Leukocyte immunoglobuli 99.1 6.5E-11 2.2E-15 79.6 5.7 81 16-106 109-195 (196)
479 1ry7_B FGFR-3, fibroblast grow 99.1 2.7E-11 9.4E-16 86.7 4.1 84 15-108 132-216 (334)
480 2jll_A NCAM2, neural cell adhe 99.1 4.1E-10 1.4E-14 82.0 10.4 84 15-107 109-193 (389)
481 1rhf_A Tyrosine-protein kinase 99.1 3.7E-10 1.3E-14 74.3 9.3 75 13-107 105-182 (182)
482 3v2a_R Vascular endothelial gr 99.1 5.2E-12 1.8E-16 99.3 0.0 83 14-109 674-757 (772)
483 2aw2_A B and T lymphocyte atte 99.1 1.6E-09 5.5E-14 68.0 11.2 93 14-113 19-115 (120)
484 3qs9_E FL cytokine receptor; i 99.1 5.3E-11 1.8E-15 92.0 5.1 80 14-108 334-414 (527)
485 1cs6_A Axonin-1; neural cell a 99.1 2.2E-10 7.6E-15 83.3 8.1 87 5-108 206-293 (382)
486 1f2q_A High affinity immunoglo 99.1 1.7E-10 6E-15 76.1 6.8 77 16-111 95-174 (176)
487 2vol_A Murine IGG FC; FC, zinc 99.1 3.9E-11 1.3E-15 81.6 3.6 69 18-94 15-89 (207)
488 1p6f_A NKP46, natural cytotoxi 99.1 6.8E-10 2.3E-14 77.9 9.9 90 5-108 6-98 (242)
489 1e07_A Carcinoembryonic antige 99.1 4.9E-10 1.7E-14 87.0 10.0 73 13-107 566-639 (642)
490 3rjd_A High affinity immunoglo 99.1 4.2E-10 1.4E-14 77.5 8.5 78 9-108 4-82 (262)
491 3ry4_A Low affinity immunoglob 99.1 4.4E-10 1.5E-14 73.3 8.0 74 15-107 94-170 (170)
492 3bp6_B Programmed cell death 1 99.1 5.8E-10 2E-14 74.7 8.5 81 17-110 114-195 (202)
493 2rgs_A I, IG gamma-2B heavy ch 99.1 3.3E-11 1.1E-15 82.7 2.2 82 5-94 9-97 (218)
494 4f80_A Butyrophilin subfamily 99.1 4.8E-10 1.6E-14 76.6 8.0 86 14-109 126-214 (226)
495 1b6u_A KIR2DL3, P58 killer cel 99.1 1.5E-09 5.1E-14 77.0 10.4 93 5-109 6-104 (257)
496 2o26_X MAST/stem cell growth f 99.1 2.4E-10 8.3E-15 80.4 6.2 88 5-107 91-182 (290)
497 3mjg_X Beta-type platelet-deri 99.1 5.4E-10 1.8E-14 78.4 7.9 83 9-107 3-89 (289)
498 1jbj_A CD3 epsilon and gamma e 99.1 4E-10 1.4E-14 75.6 6.8 68 18-107 11-80 (186)
499 1e07_A Carcinoembryonic antige 99.1 4.7E-10 1.6E-14 87.1 8.2 92 12-108 5-108 (642)
500 3qs9_E FL cytokine receptor; i 99.0 5.7E-10 2E-14 86.3 8.4 85 13-108 234-323 (527)
No 1
>3bp6_A Programmed cell death protein 1; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3rnk_A 3sbw_A 3bp5_A 1npu_A 3rnq_A
Probab=99.82 E-value=3.2e-19 Score=113.27 Aligned_cols=100 Identities=18% Similarity=0.173 Sum_probs=74.0
Q ss_pred EeecceEEEecCCcEEEEEEEccCC-CCEEEEEecCCC---e-EEEec-c-eEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRDW---H-ILTSG-V-LTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~---~-~l~~~-~-~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
++.+..+++.+|++|+|+|.++... .+.|.|||+.++ . ++... . .....++||.+..+..++.++|+|+++++
T Consensus 3 ~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~ 82 (117)
T 3bp6_A 3 TFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNILDTRR 82 (117)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEESSCCG
T ss_pred eecCCcEEEeCCCCEEEEeEeecCCCCCEEEEEEeCCCCCceEEEEECCCCccccccCcEEEEEcCCCCEEEEEECcCCH
Confidence 5667778999999999999998653 578999999742 2 23222 1 12345789999866778899999999999
Q ss_pred CCCEEEEEeecCCC-C----eeEEEEeceecc
Q psy14080 83 RDNGTYECQAQPYT-T----TSHSQNAPGLGD 109 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~-~----~s~~~~L~V~g~ 109 (113)
+|+|+|+|++...+ . .+..+.|.|.+.
T Consensus 83 ~Dsg~Y~C~~~~~~~~~~~~~~~~t~L~V~~~ 114 (117)
T 3bp6_A 83 NDSGIYLCGAISLHPKLKIEESPGAELVVTER 114 (117)
T ss_dssp GGCEEEEEEEEECSSSCEEEECCCEEEEEC--
T ss_pred HHCEEEEEEEEecCCccccccCCcEEEEEEhH
Confidence 99999999996432 2 235678888764
No 2
>3bik_B Programmed cell death protein 1; CO-stimulation, receptor-ligand complex, immunoglobulin-like sandwich, T cell, B cell, programmed death; 2.65A {Mus musculus} SCOP: b.1.1.1
Probab=99.81 E-value=8.7e-19 Score=114.14 Aligned_cols=106 Identities=19% Similarity=0.187 Sum_probs=77.4
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCC-CCEEEEEecCCC---e-EEEec-c-eEEcCCCCEEEEEeCCCCcEEEEE
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRDW---H-ILTSG-V-LTYTNDARFQVIHTDGSDDWNLQI 77 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~---~-~l~~~-~-~~~~~~~R~~~~~~~~~~~~~L~I 77 (113)
|-...++....+++.+|++|+|+|.++... ...|+||||..+ . ++... . .....++||.+..+..++.++|+|
T Consensus 8 ~~~~v~Q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I 87 (134)
T 3bik_B 8 PWRSLTFYPAWLTVSEGANATFTCSLSNWSEDLMLNWNRLSPSNQTEKQAAFSNGLSQPVQDARFQIIQLPNRHDFHMNI 87 (134)
T ss_dssp --CCEEEECSEEEEETTSCEEEEEEESSCCTTCEEEEEEECTTCCEEEEEEEETTEEEESSCTTEEEEECTTSSEEEEEE
T ss_pred CCccEEECCCeEEEeCCCCEEEEEEeCCCCCCcEEEEEEcCCCCCceEEEEEcCCCCCcccCCCEEEEecCCCCEEEEEE
Confidence 444556677789999999999999998653 578999999742 2 23222 1 123347899987666778899999
Q ss_pred ccCCCCCCEEEEEeecCCCC-----eeEEEEeceeccc
Q psy14080 78 KFLQKRDNGTYECQAQPYTT-----TSHSQNAPGLGDL 110 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~~~~-----~s~~~~L~V~g~~ 110 (113)
++++++|+|+|+|++..... ....+.|.|.+..
T Consensus 88 ~~~~~~Dsg~Y~C~~~~~~~~~~~~~~~gt~L~V~~~~ 125 (134)
T 3bik_B 88 LDTRRNDSGIYLCGAISLHPKAKIEESPGAELVVTERI 125 (134)
T ss_dssp CSCCGGGCEEEEEEEEECSSSCEEEECCCEEEEEECCC
T ss_pred CCCChHHCEEEEEEEEeCCCCceEEEcCCEEEEEeCCC
Confidence 99999999999999964321 2346788887654
No 3
>3m45_A Cell adhesion molecule 2; IG fold, dimer, disulfide bond, glycoprotein, immunoglobulin membrane, transmembrane; HET: NAG; 2.21A {Mus musculus}
Probab=99.80 E-value=2.2e-18 Score=106.10 Aligned_cols=96 Identities=14% Similarity=0.150 Sum_probs=77.3
Q ss_pred eecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEE
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (113)
....++++.+|++++|.|.+.+.+.+.|.|+|.. ..++..+......++||.+... ..+.++|.|.+++.+|+|.|+|
T Consensus 11 ~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~-~~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C 88 (108)
T 3m45_A 11 PLTQNVTVVEGGTAILTCRVDQNDNTSLQWSNPA-QQTLYFDDKKALRDNRIELVRA-SWHELSISVSDVSLSDEGQYTC 88 (108)
T ss_dssp EECCCEEEETTSCEEEEEEESSCSSCCEEEECTT-CCEEEETTEECSCCTTEEEEEE-SSSEEEEEECSCCGGGCEEEEE
T ss_pred ccCCeeEEEeCCcEEEEeEEcCCCccEEEEEcCC-CceEEEcCCcccccCcEEEeec-CCCcEEEEECCCChhHCeEEEE
Confidence 3456789999999999999999888899999854 3355554444456779998653 3468899999999999999999
Q ss_pred eecCCCCeeEEEEeceec
Q psy14080 91 QAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 91 ~~~~~~~~s~~~~L~V~g 108 (113)
.+...+..+..+.|.|.+
T Consensus 89 ~~~n~~~~~~~~~L~V~~ 106 (108)
T 3m45_A 89 SLFTMPVKTSKAYLTVLG 106 (108)
T ss_dssp EECSSSCEEEEEEEEEEC
T ss_pred EEEcCCCcEEEEEEEEEc
Confidence 996677788899999876
No 4
>2e27_L Anti-ciguatoxin antibody, light chain; immunoglobulin fold, immune system; HET: AB0; 1.70A {Mus musculus} PDB: 3iy1_A
Probab=99.80 E-value=8.5e-19 Score=111.90 Aligned_cols=103 Identities=15% Similarity=0.105 Sum_probs=72.3
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeE-EEecceEE-cCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHI-LTSGVLTY-TNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~-l~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.++.+..+++.+|++|+|+|.+++.+.+.|.|||+.+ +.. +....... ..++||.+.. +++.++|+|.+++++
T Consensus 6 v~q~p~~v~v~~G~~vtL~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~ 83 (119)
T 2e27_L 6 MTQSPSSLSASLGGKVTITCKANQDIKKKIAWYQHKPGKGPRLLIYYTSTLKSGISSRFSGSG--SGRDYSFSISNLEPE 83 (119)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEECSCCGG
T ss_pred eEecCCeEEEeCCCCEEEEEEeCCCCCceEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc--cCCEEEEEECCCChH
Confidence 3455677899999999999999987778999999863 233 33222111 1257999863 456899999999999
Q ss_pred CCEEEEEeecCCC--CeeEEEEeceecccccC
Q psy14080 84 DNGTYECQAQPYT--TTSHSQNAPGLGDLLMH 113 (113)
Q Consensus 84 D~G~Y~C~~~~~~--~~s~~~~L~V~g~~~~~ 113 (113)
|+|+|+|++.... ..-....|.|++++.-|
T Consensus 84 DsG~Y~C~~~~~~~~~fg~GT~l~v~~~~~~~ 115 (119)
T 2e27_L 84 DAATYYCLQYDNFTWTFGGGTKLEIKRAAGHH 115 (119)
T ss_dssp GCEEEEEEECGGGCCEECCCEEEEEEC-----
T ss_pred HCEEEEEEEccCCceEECCCEEEEEeCCCccc
Confidence 9999999995432 23456678888766543
No 5
>3knb_A Titin; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.80 E-value=5.4e-19 Score=109.61 Aligned_cols=96 Identities=19% Similarity=0.121 Sum_probs=75.9
Q ss_pred cCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 3 ~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
++|+.|. ....++++.+|+++.|.|.+.+.+.+.|.|+|. +..+.. ..+.||.+.. ..+..+|.|.+++.
T Consensus 3 ~~PP~i~-~~p~~~~v~~G~~~~l~C~~~g~P~p~v~W~k~--g~~i~~-----~~~~~~~~~~--~~~~~~L~I~~~~~ 72 (100)
T 3knb_A 3 GIPPKIE-ALPSDISIDEGKVLTVACAFTGEPTPEVTWSCG--GRKIHS-----QEQGRFHIEN--TDDLTTLIIMDVQK 72 (100)
T ss_dssp CEEEEEC-CCCSEEEEETTSEEEEEEEEEEESCCEEEEEET--TEECCT-----TGGGTEEEEE--CSSEEEEEESSCCG
T ss_pred CCCCEEE-eCCCcEEEeCCCeEEEEEEEEEecCCEEEEEEC--ceEeee-----eccceeeeec--ccceEEEEEcCCCc
Confidence 4566664 456788999999999999999999999999983 333321 1245887763 34577999999999
Q ss_pred CCCEEEEEee-cCCCCeeEEEEeceec
Q psy14080 83 RDNGTYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 83 ~D~G~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
+|+|.|.|.+ +..+..+..++|.|++
T Consensus 73 ~D~G~Y~C~a~N~~G~~~~~~~l~V~~ 99 (100)
T 3knb_A 73 QDGGLYTLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCCEEEEEEEEECCCEEEEEEEEEEEE
Confidence 9999999999 5667888899999976
No 6
>3rrq_A Protein PD-1, programmed cell death protein 1; programmed death-1, costimulatory, immune system; 2.10A {Homo sapiens}
Probab=99.79 E-value=8e-19 Score=113.45 Aligned_cols=102 Identities=15% Similarity=0.101 Sum_probs=74.6
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCC-CCEEEEEecCC---Ce-EEEecce--EEcCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRD---WH-ILTSGVL--TYTNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~---~~-~l~~~~~--~~~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
.+++....+++.+|++|+|.|.++... ...|.|||+.. .. ++..... .....+||.+..+.+.+.++|+|+++
T Consensus 3 ~~~Q~P~~~~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 82 (129)
T 3rrq_A 3 PPTFSPALLVVTEGDNATFTCSFSNTSESFVLNWYRMSPSNQTDKLAAFPEDRSQPGQDCRFRVTQLPNGRDFHMSVVRA 82 (129)
T ss_dssp CCEEECSEEEEETTSCEEEEEECCCCC-CEEEEEEEEESTTSCEEEEEETC--------CCEEEEECTTSSEEEEEESSC
T ss_pred CcEECCCEEEEeCCCCEEEEeEecCCCCCcEEEEeEeCCCCCccEEEEEcCCccCCCcCCcEEEEEcCCCCEEEEEECCC
Confidence 346777789999999999999998754 56899999863 22 3333221 11235799998766778899999999
Q ss_pred CCCCCEEEEEeecC-CCCe----eEEEEeceecc
Q psy14080 81 QKRDNGTYECQAQP-YTTT----SHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~-~~~~----s~~~~L~V~g~ 109 (113)
+.+|+|+|+|++.. .+.. +..+.|.|.+.
T Consensus 83 ~~~Dsg~Y~C~~~~~~~~~~~~~s~~~~L~V~~~ 116 (129)
T 3rrq_A 83 RRNDSGTYLCGAISLAPKLQIKESLRAELRVTER 116 (129)
T ss_dssp CGGGCEEEEEEEEECGGGCEEEECCCEEEEEECC
T ss_pred ChhHCEEEEEEEEecCCCceeeEeceEEEEEecC
Confidence 99999999999954 3333 45688888764
No 7
>1hkf_A NKP44, NK cell activating receptor; natural cytotoxicity receptor, immunoglobulin domain; 2.2A {Homo sapiens} SCOP: b.1.1.1
Probab=99.79 E-value=8.8e-19 Score=112.52 Aligned_cols=85 Identities=14% Similarity=0.173 Sum_probs=64.6
Q ss_pred eecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC----eEEEec-ceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW----HILTSG-VLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~----~~l~~~-~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
+....+++.+|++|+|+|.++... ...+.|||+.++ .++... .......+||.+..+..++.++|+|++++++
T Consensus 15 ~~~~~v~~~~G~svtL~C~~s~~~~~~~~v~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~ 94 (122)
T 1hkf_A 15 SKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCIRLVTSSKPRTMAWTSRFTIWDDPDAGFFTVTMTDLREE 94 (122)
T ss_dssp CCCEEEEECTTCCEEEEEECCCCTTCCCEEEEEEEEETTEEEEEEEECSTTCCBCSTTEEEEEETTTTEEEEEECSCCGG
T ss_pred cCCceEEEecCCCEEEEeEccCCCCcccEEEEEcCCCCCCceEEEEeCCeEeEeecCcEEEEEcCcCCEEEEEEeCCCHH
Confidence 345568899999999999998542 368999999742 233322 2222346899987667788999999999999
Q ss_pred CCEEEEEeecCC
Q psy14080 84 DNGTYECQAQPY 95 (113)
Q Consensus 84 D~G~Y~C~~~~~ 95 (113)
|+|+|+|++...
T Consensus 95 Dsg~Y~C~v~~~ 106 (122)
T 1hkf_A 95 DSGHYWCRIYRP 106 (122)
T ss_dssp GCEEEEEEEECT
T ss_pred HCEEEEEEEEcC
Confidence 999999999754
No 8
>1zox_A CLM-1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, structural genomics, PSI, protein structure initiative; 2.10A {Mus musculus}
Probab=99.79 E-value=2.2e-18 Score=108.15 Aligned_cols=97 Identities=9% Similarity=-0.014 Sum_probs=72.2
Q ss_pred ecceEEEecCCcEEEEEEEccCC-CCEEEEEecCCC---eEEE-ec-ceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRDW---HILT-SG-VLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~---~~l~-~~-~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
.+..+++.+|++|+|+|.+.... ...|.|||+..+ ..+. .. ......++||.+..+...+.++|+|++++.+|+
T Consensus 7 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~~~~Ds 86 (113)
T 1zox_A 7 GPEEVSGQEQGSLTVQCRYTSGWKDYKKYWCQGVPQRSCKTLVETDASEQLVKKNRVSIRDNQRDFIFTVTMEDLRMSDA 86 (113)
T ss_dssp CCSEEEEETTSCEEEEEEECGGGTTSCEEEEESSSGGGCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred CCCEEEEeCCCcEEEEeECCCCcccceEEEEeCCCCCCCeEEEEecCccccccCCCEEEEECCcCCEEEEEEccCCHHHC
Confidence 34568899999999999998653 346999998742 3332 21 111123579998766677889999999999999
Q ss_pred EEEEEeecCCC-CeeEEEEeceec
Q psy14080 86 GTYECQAQPYT-TTSHSQNAPGLG 108 (113)
Q Consensus 86 G~Y~C~~~~~~-~~s~~~~L~V~g 108 (113)
|+|+|++...+ ..+..++|.|..
T Consensus 87 G~Y~C~v~~~~~~~~~~v~L~V~~ 110 (113)
T 1zox_A 87 GIYWCGITKGGLDPMFKVTVNIGP 110 (113)
T ss_dssp EEEEEEECCSSSCCEEEEEEEEEC
T ss_pred EEEEEeeEcCCCCccEEEEEEEEc
Confidence 99999996543 457788888863
No 9
>1mqk_L Antibody 7E2 FV fragment, light chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_D 3ehb_D* 3hb3_D* 1qle_L* 1f6l_L 3iy2_A 1vfa_A 1dvf_A 1kir_A 1g7i_A 1g7j_A 1a2y_A 1kip_A 1kiq_A 1vfb_A 1g7h_A 1a7o_L 1g7l_A 1g7m_A 1a7n_L ...
Probab=99.78 E-value=3.5e-18 Score=109.10 Aligned_cols=99 Identities=14% Similarity=0.100 Sum_probs=71.4
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeE-EEecceEE-cCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHI-LTSGVLTY-TNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~-l~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+++.+.+.|.|||+.. ... +....... ...+||.+.. ..+.++|+|++++.+|
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~li~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~D 82 (120)
T 1mqk_L 5 TQTPVSLSASVGETVTITCRASENIYSYLAWYQQKQGKSPQFLVYNAKTLGEGVPSRFSGSG--SGTQFSLKINSLLPED 82 (120)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGG
T ss_pred EecCCeEEEcCCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEeCCcCCCCCCceEEEec--cCCEEEEEECCCCHHH
Confidence 455677899999999999999987778899999863 233 33222111 1257999863 4568899999999999
Q ss_pred CEEEEEeecCCC---CeeEEEEeceeccc
Q psy14080 85 NGTYECQAQPYT---TTSHSQNAPGLGDL 110 (113)
Q Consensus 85 ~G~Y~C~~~~~~---~~s~~~~L~V~g~~ 110 (113)
+|+|+|++.... .......|.|++..
T Consensus 83 sG~Y~C~~~~~~~~~~fg~gt~L~V~~~~ 111 (120)
T 1mqk_L 83 FGSYYCQHHYGTPPLTFGGGTKLEIKREQ 111 (120)
T ss_dssp CEEEEEEECSSSSSCCBCCCEEEEEC---
T ss_pred CEEEEEEEEeCCCceEECCCeEEEEecCC
Confidence 999999996432 34456788887754
No 10
>2xt1_B Camelid VHH 9; viral protein-immune system complex; 1.32A {Vicugna pacos} PDB: 2xv6_B 2xxc_B 2xxm_B
Probab=99.78 E-value=5.3e-18 Score=108.48 Aligned_cols=97 Identities=13% Similarity=0.149 Sum_probs=68.4
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eecc----eEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSGV----LTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~~----~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.+ +..+ .... ... ...+||.+..+..++.++|+|+++
T Consensus 9 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 88 (121)
T 2xt1_B 9 SGGGLVQAGGSLRLSCAASGSFFMSNVMAWYRQAPGKARELIAAIRGGDMSTVYDDSVKGRFTITRDDDKNILYLQMNDL 88 (121)
T ss_dssp ECCEEEETTCCEEEEEEEESSSCCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEeCCCCEEEEEEecCeeccCceEEEEEECCCCCcEEEEEEecCCCcceeCcccCCeEEEEEeCCCCEEEEEECCC
Confidence 446899999999999999853 357899999873 2333 2211 111 125799998766678899999999
Q ss_pred CCCCCEEEEEeecCCCCeeEEEEeceeccc
Q psy14080 81 QKRDNGTYECQAQPYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~~~s~~~~L~V~g~~ 110 (113)
+++|+|+|+|++.. ...-....|.|....
T Consensus 89 ~~~DsG~Y~C~~~~-~~fg~Gt~l~v~~~~ 117 (121)
T 2xt1_B 89 KPEDTAMYYCKASG-SSWGQGTQVTVSSHH 117 (121)
T ss_dssp CGGGCEEEEEEETT-CCCCCCEEEEEEC--
T ss_pred CHHHCEEEEEEEEe-CEECCCEEEEEeccc
Confidence 99999999999972 222334466666543
No 11
>1jhl_L IGG1-kappa D11.15 FV (light chain); complex(antibody-antigen); 2.40A {Mus musculus} SCOP: b.1.1.1
Probab=99.78 E-value=4.8e-18 Score=105.91 Aligned_cols=96 Identities=17% Similarity=0.136 Sum_probs=69.9
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEE-ecceEE-cCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILT-SGVLTY-TNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~-~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+. ...... ..++||.+.. +.+.++|+|.+++++|
T Consensus 5 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D 82 (108)
T 1jhl_L 5 TQSPSYLVASPGETITINCRASKSISKSLAWYQEKPGKTNNLLIYSGSTLQSGIPSRFSGSG--SGTDFTLTISSLEPED 82 (108)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--SSSEEEEEECSCCTTC
T ss_pred eccCCeeEEcCCCCEEEEeEECCCCCceEEEEEECCCCCCEEEEEcCCCcCCCCCceEEEEe--cCCEEEEEECCCCHHH
Confidence 445667899999999999999988788999999863 23332 222111 1257998863 4578899999999999
Q ss_pred CEEEEEeecCCC--CeeEEEEecee
Q psy14080 85 NGTYECQAQPYT--TTSHSQNAPGL 107 (113)
Q Consensus 85 ~G~Y~C~~~~~~--~~s~~~~L~V~ 107 (113)
+|+|+|.+.... .......|.|+
T Consensus 83 sG~Y~C~~~n~~~~~fg~gt~L~V~ 107 (108)
T 1jhl_L 83 FAMYICQQHNEYPWTFGGGTKLEIK 107 (108)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEEC
T ss_pred CEEEEEEEccCCccEECCCEEEEEE
Confidence 999999996543 22345566665
No 12
>3rbg_A Cytotoxic and regulatory T-cell molecule; IGV, crtam, structural genomics, PSI-biology, NEW YORK struc genomics research consortium, nysgrc; 2.30A {Homo sapiens}
Probab=99.77 E-value=3.9e-18 Score=108.78 Aligned_cols=98 Identities=10% Similarity=0.147 Sum_probs=76.5
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
+....++++.+|++++|.|.+.+.+.+.|.|++.. ..++.........++||.+.. ...+.++|.|.+++.+|+|.|+
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~-~~~~~~~~~~~~~~~r~~~~~-~~~~~~~L~I~~v~~~DsG~Y~ 82 (124)
T 3rbg_A 5 TNHTETITVEEGQTLTLKCVTSLRKNSSLQWLTPS-GFTIFLNEYPVLKNSKYQLLH-HSANQLSITVPNVTLQDEGVYK 82 (124)
T ss_dssp CCSEEEEEEETTSCEEEEEECCCCTTCEEEEECTT-SCEEEETTEECSCSSCCEEEE-EETTEEEEEESSCCGGGCEEEE
T ss_pred cCCCccEEEcCCCCEEEEeEEeccCCCEEEEECCC-CeEEEEeccccccCCcEEEEe-CCCCEEEEEECCCChHHCEEEE
Confidence 44556789999999999999998888999999754 344443333334578998864 2446789999999999999999
Q ss_pred EeecCCCCeeEEEEeceecc
Q psy14080 90 CQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 90 C~~~~~~~~s~~~~L~V~g~ 109 (113)
|.+...+..+..+.|.|.+.
T Consensus 83 C~a~n~g~~~~~~~l~V~~~ 102 (124)
T 3rbg_A 83 CLHYSDSVSTKEVKVIVLAT 102 (124)
T ss_dssp EEEESSSEEEEEEEEEEECC
T ss_pred EEEEcCCCCcEEEEEEEEeC
Confidence 99965477788899998764
No 13
>2oi9_C V beta, T cell receptor beta chain; TCR, MHC, immune system; 2.35A {Mus musculus} PDB: 2e7l_C
Probab=99.77 E-value=1.3e-17 Score=106.79 Aligned_cols=102 Identities=11% Similarity=0.082 Sum_probs=70.4
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEec-ce--EE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSG-VL--TY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~-~~--~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
++.+..+++.+|++|+|+|.+. .....|.|||+.+ +.++... .. .. ...+||.+.. ...+.++|+|++++
T Consensus 5 ~q~p~~v~v~~G~~vtL~C~~~-~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~R~~~~~-~~~~~~sL~I~~v~ 82 (121)
T 2oi9_C 5 TQSPRNKVAVTGEKVTLSCNQT-NNHNNMYWYRQDTGHELRLIYYSYGAGSTEKGDIPDGYKASR-PSQENFSLTLESAT 82 (121)
T ss_dssp EEECSEEEEETTCCEEEEEEES-SCCSEEEEEEESSSSCCEEEEEESSTTCCEECSSCTTEEEEC-CSSSEEEEEESSCC
T ss_pred EeCCCeEEecCCCcEEEEEEec-CCCCeEEEEEECCCCCcEEEEEECCCceeeCCccCCCeEEEc-CCCCEEEEEECCCC
Confidence 4556778999999999999975 3567899999973 2333321 11 11 1257999875 45567999999999
Q ss_pred CCCCEEEEEeecCCCC--eeEEEEeceecccccC
Q psy14080 82 KRDNGTYECQAQPYTT--TSHSQNAPGLGDLLMH 113 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~~--~s~~~~L~V~g~~~~~ 113 (113)
++|+|+|+|++..... ......|.|++++..|
T Consensus 83 ~~DsG~Y~C~~~~~~~~~fg~GT~l~v~~~~~~~ 116 (121)
T 2oi9_C 83 PSQTSVYFCASGGGGTLYFGAGTRLSVLSSALEH 116 (121)
T ss_dssp GGGCEEEEEEEESSSCEEECCCEEEEEEC-----
T ss_pred HHHCEEEEEEEccCCccEECCCeEEEEechhhhh
Confidence 9999999999965432 2345678888776654
No 14
>1dlf_L Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 1wz1_L* 2dlf_L 1maj_A 1mak_A 1ktr_L 2cju_L* 2uud_K* 1dsf_L 3nn8_B 1n4x_L 1bfv_L* 1cfv_L* 2bfv_L* 1wt5_C
Probab=99.77 E-value=5.8e-18 Score=106.50 Aligned_cols=97 Identities=13% Similarity=0.095 Sum_probs=69.4
Q ss_pred EeecceEEEecCCcEEEEEEEccCC-----CCEEEEEecCC---CeEE-EecceEE-cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV-----KVRVSWVRRRD---WHIL-TSGVLTY-TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~-----~~~V~W~k~~~---~~~l-~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
++.+..+++.+|++|+|+|.+++.. .+.|.|||+.+ +..+ ....... ...+||.+.. .++.++|+|++
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~ 82 (113)
T 1dlf_L 5 TQTPLSLPVSLGNQASISCRSSQSLVHSNGNTYLHWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG--SGTDFTLKISR 82 (113)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEECS
T ss_pred EEeCCEEEEcCCCCEEEEEEccccccccCCCceEEEEEECCCCCCeEEEEecCccCCCCCCCEEEEc--cCCEEEEEECC
Confidence 4556678999999999999998764 47899999873 2333 3222111 1257999864 45789999999
Q ss_pred CCCCCCEEEEEeecCCCC--eeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQPYTT--TSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~~--~s~~~~L~V~g 108 (113)
++++|+|+|+|++..... ......|.|+|
T Consensus 83 v~~~DsG~Y~C~~~~~~~~~fg~gT~l~V~~ 113 (113)
T 1dlf_L 83 VEAEDLGVYFCSQSTHVPFTFGSGTKLEIKR 113 (113)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CChHHCEEEEEEEecCCCcEECCCEEEEEcC
Confidence 999999999999965322 23455666654
No 15
>1i8k_A Epidermal growth factor receptor antibody MR1SCFV light chain; antibody-peptide complex, immunoglobulin fold, type II' beta turn., immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 PDB: 1i8i_A
Probab=99.77 E-value=3.2e-18 Score=106.77 Aligned_cols=84 Identities=14% Similarity=0.103 Sum_probs=63.8
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEE-EecceEE-cCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHIL-TSGVLTY-TNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l-~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+++.+.+.|.|||+.+ ...+ ....... ..++||.+.. +++.++|+|++++++|
T Consensus 5 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D 82 (107)
T 1i8k_A 5 TQSPASLSVATGEKVTIRCMTSTDIDDDMNWYQQKPGEPPKFLISEGNTLRPGVPSRFSSSG--TGTDFVFTIENTLSED 82 (107)
T ss_dssp EEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESSCCGGG
T ss_pred EeCCCeEEecCCCCEEEEEEECCCCCCcEEEEEECCCCCCEEEEEecCccCCCCCCCEEEEc--cCCEEEEEECCCCHHH
Confidence 455677899999999999999987778899999863 2333 3222111 1257999863 4578899999999999
Q ss_pred CEEEEEeecCC
Q psy14080 85 NGTYECQAQPY 95 (113)
Q Consensus 85 ~G~Y~C~~~~~ 95 (113)
+|+|+|++...
T Consensus 83 sG~Y~C~~~~~ 93 (107)
T 1i8k_A 83 VGDYYCLQSFN 93 (107)
T ss_dssp CEEEEEEECSS
T ss_pred CEEEEEEEeeC
Confidence 99999999653
No 16
>2nms_A CMRF35-like-molecule 1; IG-superfamily, IG-V, NKP44-like, myeloid IG-like receptor, inhibitory receptor, myelo-monocytic cells; 2.60A {Homo sapiens}
Probab=99.77 E-value=7.3e-18 Score=108.42 Aligned_cols=98 Identities=14% Similarity=0.102 Sum_probs=72.2
Q ss_pred ecceEEEecCCcEEEEEEEccCC-CCEEEEEecCCC---eEE-Eec-ceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRDW---HIL-TSG-VLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~---~~l-~~~-~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
....+++.+|++|+|+|.++... ...+.|||+..+ ..+ ..+ .......+||.+..+..++.++|+|++++++|+
T Consensus 8 ~p~~v~~~~G~svtL~C~~s~~~~~~~~~W~rq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~Ds 87 (124)
T 2nms_A 8 GPTTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIWRDCKILVKTSGSEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDA 87 (124)
T ss_dssp CCSEEEEETTCCEEEEEEECTTCTTSEEEEEESSSSTTCEEEEECCSSSCCEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred cccEEEEeCCCCEEEEeEEeCCcccccEEEEeCCCCCCceEEEEcCCcccceeCCCEEEEEcCcCCEEEEEEeCCCHHHC
Confidence 34568899999999999998653 357999999742 233 222 111123579998766677899999999999999
Q ss_pred EEEEEeecCCC-CeeEEEEeceecc
Q psy14080 86 GTYECQAQPYT-TTSHSQNAPGLGD 109 (113)
Q Consensus 86 G~Y~C~~~~~~-~~s~~~~L~V~g~ 109 (113)
|+|+|++.... .....+.|.|...
T Consensus 88 g~Y~C~~~~~~~~~~~~v~L~V~~~ 112 (124)
T 2nms_A 88 DTYWCGIEKTGNDLGVTVQVTIDPA 112 (124)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEEEEEEEcCCCCccEEEEEEEeCC
Confidence 99999996543 3456688888653
No 17
>3cx2_A Myosin-binding protein C, cardiac-type; protonation states, actin-binding, cardiomyopathy, cell adhesion, disease mutation, immunoglobulin domain; 1.30A {Homo sapiens} PDB: 2v6h_A 2avg_A
Probab=99.77 E-value=3e-18 Score=106.83 Aligned_cols=98 Identities=16% Similarity=0.144 Sum_probs=72.4
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCC---CEEEEEecCCCeEEEecceEEcCCCCEEEEEe--C--CCCcEEEEE
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVK---VRVSWVRRRDWHILTSGVLTYTNDARFQVIHT--D--GSDDWNLQI 77 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~---~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~--~--~~~~~~L~I 77 (113)
|...+...++++++.+|++|+|.|.+.+.+. +.|.|||.. ...+ .. ....||.+... . ....++|+|
T Consensus 3 p~p~f~~~p~~~~v~~G~~v~L~C~~~g~p~~~~p~v~W~k~~-~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~L~I 76 (108)
T 3cx2_A 3 PIGLFVMRPQDGEVTVGGSITFSARVAGASLLKPPVVKWFKGK-WVDL--SS---KVGQHLQLHDSYDRASKVYLFELHI 76 (108)
T ss_dssp CCCSCSBCCCCEEEETTCCEEEEEEEECC-CCSCCEEEEEETT-TEEG--GG---GCBTTEEEEEEEETTTTEEEEEEEE
T ss_pred CccEEEeCCCcEEEeCCCCEEEEEEECCCccCCCcEEEEccCC-cccc--cc---cCCceEEEeeEEecccccceEEEEE
Confidence 5566667778899999999999999998877 899999943 1111 10 12356665321 1 123679999
Q ss_pred ccCCCCCCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 78 KFLQKRDNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
.+++.+|+|.|+|.+. ..+..+..++|.|.+
T Consensus 77 ~~v~~~D~G~Y~C~a~N~~G~~~~~~~L~V~~ 108 (108)
T 3cx2_A 77 TDAQPAFTGSYRCEVSTKDKFDCSNFNLTVHE 108 (108)
T ss_dssp CSCCGGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred ecCCCccCEEEEEEEecCCCceEEEEEEEEeC
Confidence 9999999999999994 567888999999863
No 18
>1xed_A Polymeric-immunoglobulin receptor; IG-like fold, immune system; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=99.77 E-value=3.6e-18 Score=108.86 Aligned_cols=101 Identities=15% Similarity=0.116 Sum_probs=73.0
Q ss_pred cceEEEecCCcEEEEEEEccCC---CCEEEEEecCC---CeEE-Eecce-EEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV---KVRVSWVRRRD---WHIL-TSGVL-TYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~---~~~V~W~k~~~---~~~l-~~~~~-~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
+..+++.+|++|+|+|.++... ...+.|||+.+ ...| ..... .....+||.+..+..++.++|+|++++++|
T Consensus 7 p~~v~~~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~~~~~~~li~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~l~~~D 86 (117)
T 1xed_A 7 PEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQDD 86 (117)
T ss_dssp CSEEEEETTCCEEEEEECCCCHHHHHSCEEEEEC-----CEEEEESSSCBCTTTTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred CCeEEEecCCCEEEEeEecCCcCCCCceEEEEEeCCCCCCEEEEEeCCeEcceEcCCEEEEecCCCCEEEEEECCCChHH
Confidence 4568899999999999997541 35799999974 2333 22211 112467999876677889999999999999
Q ss_pred CEEEEEeecCCC-CeeEEEEeceecccccC
Q psy14080 85 NGTYECQAQPYT-TTSHSQNAPGLGDLLMH 113 (113)
Q Consensus 85 ~G~Y~C~~~~~~-~~s~~~~L~V~g~~~~~ 113 (113)
+|+|+|++...+ ...-...|.|++...-|
T Consensus 87 sG~Y~C~v~~~~~~l~f~~~~~~~~~~~~~ 116 (117)
T 1xed_A 87 SGRYKCGLGINSRGLSFDVSLEVLEHHHHH 116 (117)
T ss_dssp CEEEEEEESCGGGCCEEEEEEEEECCCCCC
T ss_pred CEEEEEEEEeCCCCeeEEEEEEEeeecccC
Confidence 999999996543 34566788888765443
No 19
>1eeq_A Kappa-4 immunoglobulin (light chain); protein stability, hydrogen bonds, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 PDB: 1eeu_A 1lve_A 2lve_A 3lve_A 5lve_A 4lve_A 1efq_A 1qac_A 1ek3_A 2imm_A 1mvu_A 2ap2_A 1ap2_A 3bd3_A* 3bd4_A* 3bd5_A* 2imn_A 3dus_A* 3duu_A* 3dv4_A* ...
Probab=99.77 E-value=3.6e-18 Score=107.65 Aligned_cols=97 Identities=18% Similarity=0.101 Sum_probs=68.9
Q ss_pred EeecceEEEecCCcEEEEEEEccCC------CCEEEEEecCC---CeEE-EecceEE-cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV------KVRVSWVRRRD---WHIL-TSGVLTY-TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~------~~~V~W~k~~~---~~~l-~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
++.+..+++.+|++|+|+|.+++.+ .+.|.|||+.. ...+ ....... ..++||.+.. +++.++|+|+
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~ 82 (114)
T 1eeq_A 5 TQSPDSLAVSLGERATINCKSSQSVLDSSNSKNYLAWYQQKPGQPPKLLIYWASTRESGVPDRFSGSG--SGTDFTLTIS 82 (114)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEES
T ss_pred EecCCeEEEcCCCeEEEEEEcCCCccccccCCccEEEEEECCCCCCEEEEEecCccCCCCCCCEEEee--cCCEEEEEEC
Confidence 4456778999999999999998765 36899999873 2333 3222111 1257999863 4578999999
Q ss_pred cCCCCCCEEEEEeecCCCC--eeEEEEeceec
Q psy14080 79 FLQKRDNGTYECQAQPYTT--TSHSQNAPGLG 108 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~~--~s~~~~L~V~g 108 (113)
+++++|+|+|+|++..... ......|.|+|
T Consensus 83 ~v~~~DsG~Y~C~~~~~~~~~fg~GT~l~V~~ 114 (114)
T 1eeq_A 83 SLQAEDVAVYYCQQYYSHPYSFGQGTKLEIKR 114 (114)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CCCcccCEEEEEEEeeCCeEEECCCEEEEEeC
Confidence 9999999999999965322 23455666654
No 20
>1i3g_L Antibody FV fragment; antibiotic; 2.44A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy6_A
Probab=99.77 E-value=2.8e-18 Score=107.77 Aligned_cols=97 Identities=15% Similarity=0.088 Sum_probs=68.7
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEE-EecceEE-cCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHIL-TSGVLTY-TNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l-~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+++.+.+.|.|||+.+ ...+ ....... ...+||.+.. ..+.++|+|++++++|
T Consensus 8 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~D 85 (111)
T 1i3g_L 8 TQSHKFMSTSVGDRVSITCKASQDVGTAVAWYQQKPGQSPKLLIYWASTRHTGVPDRFTGSG--SGTDFTLTISNVQSED 85 (111)
T ss_dssp EESCSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGG
T ss_pred EEeCCEEEEcCCCCEEEEEEeCCCCCCCEEEEEECCCCCCEEEEEECCccCCCCCCcEEEEc--CCCEEEEEECCCCHHH
Confidence 455667899999999999999877677899999974 2333 3222111 1257999863 4578999999999999
Q ss_pred CEEEEEeecCCCC--eeEEEEeceec
Q psy14080 85 NGTYECQAQPYTT--TSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~~~--~s~~~~L~V~g 108 (113)
+|+|+|++..... ......|.|++
T Consensus 86 sG~Y~C~~~~~~~~~fg~GT~l~V~~ 111 (111)
T 1i3g_L 86 LADYFCQQYSSYPLTFGAGTKLELKR 111 (111)
T ss_dssp CSEEEEEECSSSSCEECCCEEEEC--
T ss_pred CEEEEEEEecCCceEECCCeEEEEeC
Confidence 9999999964322 23445666653
No 21
>2q20_A VK1 O18/O8 germline light chain variable domain; Al, light chain amyloidosis, amyloid, immunoglobulin, protein fibril; 1.30A {Homo sapiens} PDB: 2kqm_A 3cdf_A 3cdc_A 2kqn_A 3cdy_A 2q1e_A 3dvi_A 1igm_L 1bww_A 1b0w_A 1bre_A 1qp1_A 3dvf_A 1rei_A 1wtl_A 1ar2_A 1fgv_L 2bx5_A 2uzi_L* 1bvk_A ...
Probab=99.77 E-value=6.8e-18 Score=105.58 Aligned_cols=95 Identities=15% Similarity=0.108 Sum_probs=67.9
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---e-EEEecceEE-cCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---H-ILTSGVLTY-TNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~-~l~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+.+.+.+.|.|||+..+ . ++....... ..++||.+.. +.+.++|+|++++++|
T Consensus 7 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~v~~~D 84 (109)
T 2q20_A 7 TQSPSSLSASVGDRVTITCQASQDISNYLNWYQQKPGKAPKLLIYDASNLETGVPSRFSGSG--SGTDFTFTISSLQPED 84 (109)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGG
T ss_pred EeeCCEEEecCCCcEEEEEeeccCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec--cCCEEEEEECCCChhh
Confidence 4456678999999999999999877788999998732 2 232222111 1257999863 4568899999999999
Q ss_pred CEEEEEeecCCC--CeeEEEEece
Q psy14080 85 NGTYECQAQPYT--TTSHSQNAPG 106 (113)
Q Consensus 85 ~G~Y~C~~~~~~--~~s~~~~L~V 106 (113)
+|+|+|.+.... .......|.|
T Consensus 85 sG~Y~C~~~~~~~~~fg~gT~L~V 108 (109)
T 2q20_A 85 IATYYCQQYDNLPYTFGQGTKLEI 108 (109)
T ss_dssp CEEEEEEECSSSSCCBCCCEEEEE
T ss_pred CEEEEEEEeeCCcceECCCEEEEE
Confidence 999999996432 2233445554
No 22
>1qfw_M FV, antibody (anti beta subunit) (light chain); glycoprotein hormone; HET: NAG; 3.50A {Mus musculus} SCOP: b.1.1.1
Probab=99.76 E-value=3.9e-18 Score=106.51 Aligned_cols=96 Identities=18% Similarity=0.140 Sum_probs=68.6
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+++.+.+.|.|||+.. ...+....... ...+||.+. .+.+.++|+|++++++|
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~--~~~~~~~L~I~~v~~~D 82 (108)
T 1qfw_M 5 TQSPKSMSMSVGERVTLSCKASETVDSFVSWYQQKPEQSPKLLIFGASNRFSGVPDRFTGS--GSATDFTLTISSVQAED 82 (108)
T ss_dssp EEECSCEECCTTCCEEEEEEESSCCCSCEEEEEECTTSCCEEEECSSSCBCTTCCTTEECC--BCSSEEEEEESSCCTTC
T ss_pred EEeCCeEEEcCCCCEEEEeeeCCCCCcEEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEE--cCCCEEEEEECCCChhh
Confidence 455667899999999999999887777899999863 23332211111 125799875 34578999999999999
Q ss_pred CEEEEEeecCCC--CeeEEEEecee
Q psy14080 85 NGTYECQAQPYT--TTSHSQNAPGL 107 (113)
Q Consensus 85 ~G~Y~C~~~~~~--~~s~~~~L~V~ 107 (113)
+|+|+|++.... .......|.|+
T Consensus 83 sG~Y~C~~~~~~~~~fg~gT~l~V~ 107 (108)
T 1qfw_M 83 FADYHCGQTYNHPYTFGGGTKLEIK 107 (108)
T ss_dssp CSEEEEEECSSSSCEECCCEEEECC
T ss_pred CEEEEEEEccCCceEECCCEEEEEc
Confidence 999999996532 22344566664
No 23
>3knb_B Obscurin-like protein 1; IG-like, titin, OBSL1, ATP-binding, calmodulin-BIN cardiomyopathy, disease mutation, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2wp3_O* 2wwm_C 2wwk_O
Probab=99.76 E-value=4.5e-18 Score=106.74 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=74.3
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.++ ...+++++.+|+++.|.|.+.+.+.+.|.|+|. +..| ..+.|+.+.. +.+..+|.|.+++.+
T Consensus 12 ~pP~f~-~~p~~~~v~~G~~~~l~C~~~G~P~p~v~W~k~--g~~l-------~~~~~~~~~~--~~~~~~L~I~~v~~~ 79 (107)
T 3knb_B 12 SPPCFL-RFPRPVRVVSGAEAELKCVVLGEPPPVVVWEKG--GQQL-------AASERLSFPA--DGAEHGLLLTAALPT 79 (107)
T ss_dssp EEEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEET--TEEC-------CCCSSEECCE--ETTEEEEEESSCCGG
T ss_pred CCCEEE-eCCCcEEEeCCCcEEEEEEEEEecCCEEEEEEC--cccc-------cceeeEEEee--cCceEEEEEecCChh
Confidence 355444 456788999999999999999999999999983 3333 2467887753 345779999999999
Q ss_pred CCEEEEEee-cCCCCeeEEEEeceec
Q psy14080 84 DNGTYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
|+|.|.|.+ +..+..+..+.|.|+.
T Consensus 80 D~G~Y~C~a~N~~G~~~~~~~l~V~~ 105 (107)
T 3knb_B 80 DAGVYVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred hCEEEEEEEEECCCEEEEEEEEEEEc
Confidence 999999999 5667788889999875
No 24
>1pew_A JTO2, A lambda-6 type immunoglobulin light chain, domain; beta sheet, immune system; 1.60A {Homo sapiens} SCOP: b.1.1.1 PDB: 1cd0_A 1pw3_A 2cd0_A 2w0k_A 3b5g_A 3bdx_A* 2w0l_A
Probab=99.76 E-value=3.5e-18 Score=106.89 Aligned_cols=96 Identities=17% Similarity=0.093 Sum_probs=67.5
Q ss_pred cceEEEecCCcEEEEEE-EccCC-CCEEEEEecCC-CeEEEe-cceEE-cCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 13 GQISTGFLAVFSYSDKT-VRDIV-KVRVSWVRRRD-WHILTS-GVLTY-TNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~-v~~~~-~~~V~W~k~~~-~~~l~~-~~~~~-~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
+..+++.+|++|+|+|. +++.+ .+.|.|||+.. ...+.. ..... ..++||.+..+...+.++|+|++++++|+|+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~r~~~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~DsG~ 86 (109)
T 1pew_A 7 PHSVSESPGKTVTISCTRSSGNIASNYVQWYQQRSAPITVIYEDNQRPSGVPDRFAGSIDRSSNSASLTISGLKTEDEAD 86 (109)
T ss_dssp CSEEEECTTSCEEEEEEESSSCGGGSCCEEEEC-CCCEEEEBTTTBCCTTCCTTEEEEEETTTTEEEEEECSCCGGGCEE
T ss_pred CCCEEEcCCCCEEEEEEeCCCCCCCccEEEEEECCCCcEEEEecCCcCCCCCCcEEEEeccCCCEEEEEECCCChhhCEE
Confidence 67789999999999999 76554 47899999873 223322 21111 1257999886667788999999999999999
Q ss_pred EEEeecCCCC--eeEEEEeceec
Q psy14080 88 YECQAQPYTT--TSHSQNAPGLG 108 (113)
Q Consensus 88 Y~C~~~~~~~--~s~~~~L~V~g 108 (113)
|+|++..... ......|.|+|
T Consensus 87 Y~C~~~~~~~~~fg~GT~l~V~~ 109 (109)
T 1pew_A 87 YYCQSYDARNVVFGGGTRLTVLG 109 (109)
T ss_dssp EEEEEEETTEEEECCCEEEEECC
T ss_pred EEEEEEeCCceEECCCEEEEEeC
Confidence 9999964321 22344555553
No 25
>2q87_A CMRF35-H antigen; all-beta, immunoglobulin, IG-superfamily, IG-V, NKP44-like, natural killer cell IG-like receptor, inhibitory receptor; 1.70A {Homo sapiens}
Probab=99.76 E-value=1.6e-18 Score=108.36 Aligned_cols=94 Identities=12% Similarity=0.146 Sum_probs=66.5
Q ss_pred cceEEEecCCcEEEEEEEccCC-CCEEEEEecCCC---e-EEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRDW---H-ILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~---~-~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
+..+++.+|++|+|+|.+.... .+.|.|||+... . ++.........++||.+..+..++.++|+|++++++|+|+
T Consensus 3 p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~~DsG~ 82 (110)
T 2q87_A 3 ARTVAGPVGGSLSVQCPYEKEHRTLNKYWCRPPQIFLCDKIVETKGSAGKRNGRVSIRDSPANLSFTVTLENLTEEDAGT 82 (110)
T ss_dssp EEEEEECTTSCEEEEEECCGGGTTSEEEEESCCSSSSCCCSEESSSTTCSEETTEEEEEEGGGTEEEEEESSCCGGGCEE
T ss_pred CcEEEEeCCCcEEEEeEecCCcCCceEEEEecCCCCCCeEEEEeCCccccccCCEEEEEcCcCCEEEEEEccCCHHHCEE
Confidence 3467899999999999997643 468999998732 2 2222111001357999876556678999999999999999
Q ss_pred EEEeecCC--C---CeeEEEEece
Q psy14080 88 YECQAQPY--T---TTSHSQNAPG 106 (113)
Q Consensus 88 Y~C~~~~~--~---~~s~~~~L~V 106 (113)
|+|.+... + .....++|.|
T Consensus 83 Y~C~~~~~~~g~~~~~~~~v~v~V 106 (110)
T 2q87_A 83 YWCGVDTPWLQDFHDPVVEVEVSV 106 (110)
T ss_dssp EEEEEECTTSCCBCCCSEEEEEEE
T ss_pred EEEEEecCccCccCCccEEEEEEE
Confidence 99999654 2 2344555555
No 26
>2yc1_B Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_B 3lh2_L 3h3p_L 3lhp_L
Probab=99.76 E-value=6.9e-18 Score=111.82 Aligned_cols=101 Identities=18% Similarity=0.157 Sum_probs=70.9
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEecceEEc--CCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSGVLTYT--NDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~~~~~~--~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.++.+..+++.+|++|+|+|.++..+.+.|.|||+.+ ...|........ ..+||.+.. +.+.++|+|++++++
T Consensus 19 v~q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~--~~~~~sL~I~~v~~~ 96 (146)
T 2yc1_B 19 LTQSPATLSVSPGERATLSCRASQSVRSYLAWYQQKPGQAPRLLFSDASNRATGIPARFTGSG--SGTDFTLTISSLEPE 96 (146)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGG
T ss_pred EEEeCCEEEEecCCCEEEEEEECCCCCCEEEEEEECCCCCCEEEEEeCCccCCCcCCCeEEec--CCCEEEEEECCCCHH
Confidence 3455677899999999999999877677899999973 233332211111 257999864 456899999999999
Q ss_pred CCEEEEEeecCCCC--eeEEEEeceecccc
Q psy14080 84 DNGTYECQAQPYTT--TSHSQNAPGLGDLL 111 (113)
Q Consensus 84 D~G~Y~C~~~~~~~--~s~~~~L~V~g~~~ 111 (113)
|+|+|+|++..... ......|.|++...
T Consensus 97 DsG~Y~C~~~~~~~~~fg~GT~L~V~~~~~ 126 (146)
T 2yc1_B 97 DFAIYYCQQYRYSPRTFGQGTKVEIKRAAA 126 (146)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEEC----
T ss_pred HCEEEEEEEecCCCCeECCCEEEEEeCCcc
Confidence 99999999964322 23456777776543
No 27
>1fo0_A Protein (BM3.3 T cell receptor alpha-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_A*
Probab=99.76 E-value=3.7e-18 Score=107.96 Aligned_cols=85 Identities=12% Similarity=0.068 Sum_probs=64.5
Q ss_pred EeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCCC---eEE-Eec-ce-EEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDW---HIL-TSG-VL-TYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~---~~l-~~~-~~-~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
++.+..+++.+|++|+|+|.++.. ..+.|.|||+.++ ..+ ... .. ....++||.+..+...+.++|+|+++++
T Consensus 4 ~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~ 83 (116)
T 1fo0_A 4 TQTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQI 83 (116)
T ss_dssp ECCCCEEEEETTCCEEECCEECCCCSSCEEEEEEECTTCCEEEEEEEETTCCSCCEETTEEEEEEGGGTEEEEEECSCCG
T ss_pred CcCCCcEEEecCCcEEEEeEecCCCCCeEEEEEEeCCCCCeEEEEEEccCCcCcccCCcEEEEEeCCCCEEEEEECCCCh
Confidence 445667899999999999999876 5568999999742 233 222 11 1122579998755667889999999999
Q ss_pred CCCEEEEEeecC
Q psy14080 83 RDNGTYECQAQP 94 (113)
Q Consensus 83 ~D~G~Y~C~~~~ 94 (113)
+|+|+|+|++..
T Consensus 84 ~DsG~Y~C~~~~ 95 (116)
T 1fo0_A 84 EDSAVYFCAMRG 95 (116)
T ss_dssp GGCEEEEEEEEC
T ss_pred hhCEEEEEEEEc
Confidence 999999999965
No 28
>2atp_B T-cell surface glycoprotein CD8 beta chain; CD8AB, CD8AA, MHC, immune system; HET: NAG; 2.40A {Mus musculus} SCOP: b.1.1.1 PDB: 3b9k_B*
Probab=99.76 E-value=5.8e-18 Score=106.70 Aligned_cols=86 Identities=16% Similarity=0.151 Sum_probs=64.4
Q ss_pred EeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCCC------eEE-Eecc---eEEc---CCCCEEEEEeCCCCcEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDW------HIL-TSGV---LTYT---NDARFQVIHTDGSDDWNL 75 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~------~~l-~~~~---~~~~---~~~R~~~~~~~~~~~~~L 75 (113)
++.+..+++.+|++|+|+|.+++. ....|.|||+..+ ..+ .... ..+. ..+||.+..+.+++.++|
T Consensus 2 ~Q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L 81 (115)
T 2atp_B 2 IQTPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPFL 81 (115)
T ss_dssp EEECSEEEECTTSCEEEEEECCSSCCSSEEEEEEEEECSSCEEEEEEEEEETTTEEEECGGGTTTCCEEEESTTSSSCEE
T ss_pred ccCCCCEEEcCCCcEEEEEEecCCCCcccEEEEEeCCCCCCCccEEEEEEeCCCCeEecCCCccCcEEEEEeCCCCEEEE
Confidence 345667889999999999999865 4678999998732 222 2211 1111 258999986556778999
Q ss_pred EEccCCCCCCEEEEEeecCC
Q psy14080 76 QIKFLQKRDNGTYECQAQPY 95 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~~~~ 95 (113)
+|++++++|+|+|+|++...
T Consensus 82 ~I~~~~~~DsG~Y~C~~~~~ 101 (115)
T 2atp_B 82 SIMNVKPEDSDFYFCATVGS 101 (115)
T ss_dssp EECSCCGGGCEEEEEEEECS
T ss_pred EECCCCHHHCEEEEEeEccC
Confidence 99999999999999999653
No 29
>1sq2_N Novel antigen receptor; immunoglobulin fold, protein-protein complex, hydrolase/immune system complex; 1.45A {Ginglymostoma cirratum} SCOP: b.1.1.1 PDB: 1t6v_N
Probab=99.76 E-value=6.5e-18 Score=106.71 Aligned_cols=79 Identities=20% Similarity=0.248 Sum_probs=62.6
Q ss_pred EeecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+++.+ .+.|.|||+..+ ..+. ..++||.+..+...+.++|+|++++++|
T Consensus 4 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~------~~~~r~~~~~~~~~~~~~L~I~~~~~~D 77 (113)
T 1sq2_N 4 DQTPRSVTKETGESLTINCVLRDASYALGSTCWYRKKSGEGNEESI------SKGGRYVETVNSGSKSFSLRINDLTVED 77 (113)
T ss_dssp EEECSEEEECTTCCEEEEEEECSCSSCCCCEEEEEEETTSCCCEEC------CCBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EeCCccEEEecCCCEEEEEEECCCcCCCCEEEEEEeCCCCCceEeE------EeCCCEEEEEeCCCCEEEEEECCCChhh
Confidence 4556678999999999999998654 568999998632 2221 2357998876566778999999999999
Q ss_pred CEEEEEeecC
Q psy14080 85 NGTYECQAQP 94 (113)
Q Consensus 85 ~G~Y~C~~~~ 94 (113)
+|+|+|++..
T Consensus 78 sG~Y~C~~~~ 87 (113)
T 1sq2_N 78 GGTYRCGLGV 87 (113)
T ss_dssp CEEEEEEECB
T ss_pred CEEEEEEEEe
Confidence 9999999964
No 30
>2z35_A T-cell receptor alpha-chain; immune receptor, immune system; 2.20A {Mus musculus} PDB: 2pxy_A 2z31_A 1ac6_A
Probab=99.76 E-value=4.6e-18 Score=106.82 Aligned_cols=84 Identities=14% Similarity=0.088 Sum_probs=64.8
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEE-ecc-eEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILT-SGV-LTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~-~~~-~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++....+++.+|++|+|+|.+++...+.|.|||+.+ ...+. ... .....++||.+..+..++.++|+|++++++|
T Consensus 4 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~~~~~D 83 (112)
T 2z35_A 4 TQTGGQVALSEEDFLTIHCNYSASGYPALFWYVQYPGEGPQFLFRASRDKEKGSSRGFEATYNKEATSFHLQKASVQESD 83 (112)
T ss_dssp ECSCSEEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTT
T ss_pred EeCCCcEEEcCCCCEEEEEEECCCCCCeEEEEEECCCCCcEEeEEEecccCCccCCCEEEEEcCCCCEEEEEECCCChhh
Confidence 445667899999999999999877678999999874 23332 211 1112357999875566778999999999999
Q ss_pred CEEEEEeec
Q psy14080 85 NGTYECQAQ 93 (113)
Q Consensus 85 ~G~Y~C~~~ 93 (113)
+|+|+|++.
T Consensus 84 sG~Y~C~~~ 92 (112)
T 2z35_A 84 SAVYYCALS 92 (112)
T ss_dssp CSEEEEEEE
T ss_pred CEEEEEEEE
Confidence 999999997
No 31
>2i24_N NEW antigen receptor PBLA8; immunoglobulin fold, immune system; 1.35A {Ginglymostoma cirratum} PDB: 2i25_N 2i27_N 2i26_N
Probab=99.76 E-value=7.7e-18 Score=108.10 Aligned_cols=78 Identities=23% Similarity=0.266 Sum_probs=62.3
Q ss_pred EeecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+++.. .+.|.|||+.++ ..+. ..++||.+..+..++.++|+|++++++|
T Consensus 4 ~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~~~------~~~~R~~~~~~~~~~~~~L~I~~~~~~D 77 (121)
T 2i24_N 4 DQTPQRITKETGESLTINCVVRDSRCVLSTGYWYRKPPGSRNEESI------SDGGRYVETVNRGSKSFSLRINDLTVKD 77 (121)
T ss_dssp EEECSEEEEETTCCEEEEEEECSCCCCEEEEEEEEECTTCSCCEEE------CSBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EECCcEEEEecCCcEEEEeEccCCCCCCCEEEEEEeCCCCCceeeE------ecCCCeEEEecCCCCEEEEEECCCChhh
Confidence 4556778999999999999998653 468999999742 2221 2457998765566788999999999999
Q ss_pred CEEEEEeec
Q psy14080 85 NGTYECQAQ 93 (113)
Q Consensus 85 ~G~Y~C~~~ 93 (113)
+|+|+|++.
T Consensus 78 sG~Y~C~~~ 86 (121)
T 2i24_N 78 SGTYRCKPE 86 (121)
T ss_dssp CEEEEEEEE
T ss_pred CEEEEEEEe
Confidence 999999995
No 32
>4ffy_L DENV1-E111 single chain variable fragment (light; viral envelope proteins, structural genomics, antibody epito flavivirus, niaid; 2.50A {Mus musculus}
Probab=99.76 E-value=1.2e-17 Score=107.29 Aligned_cols=99 Identities=19% Similarity=0.151 Sum_probs=72.1
Q ss_pred eEeecceEEEecCCcEEEEEEEccCC----CCEEEEEecCC---CeEEEe-cceEE-cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIV----KVRVSWVRRRD---WHILTS-GVLTY-TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~----~~~V~W~k~~~---~~~l~~-~~~~~-~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
.++.+..+++.+|++|+|+|.++..+ .+.|.|||+.. ...+.. ..... ...+||.+.. ..+.++|+|++
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~sL~I~~ 81 (126)
T 4ffy_L 4 LTQSPASLAVSLGQRATISCRASESVDHYGNSFIYWYQQKPGQPPKLLIYLASNLESGVPARFSGSG--SETDFTLTIDS 81 (126)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESS
T ss_pred EEeCCCeEEEeCCCCEEEEEecCCCcccCCCceEEEEEECCCCCCEEEEEEcCccCCCCCCcEEEec--CCCEEEEEECC
Confidence 34556678999999999999998765 56899999863 333332 22111 2357998863 45789999999
Q ss_pred CCCCCCEEEEEeecCCC--CeeEEEEeceecc
Q psy14080 80 LQKRDNGTYECQAQPYT--TTSHSQNAPGLGD 109 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~--~~s~~~~L~V~g~ 109 (113)
++++|+|+|+|++.... .......|.|++.
T Consensus 82 v~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~~ 113 (126)
T 4ffy_L 82 VETDDAATYYCQQNNEDPYTFGGGTKLEIKGG 113 (126)
T ss_dssp CCGGGCEEEEEEECSSSSCEECCCEEEEEEC-
T ss_pred CCHHHCEEEEEEEecCCCcEECCCEEEEEecC
Confidence 99999999999996532 3445678888764
No 33
>1h5b_A Murine T cell receptor (TCR) valpha domain; immune response, immunoglobulin fold; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1h5b_C 1h5b_B
Probab=99.75 E-value=1.4e-17 Score=104.59 Aligned_cols=83 Identities=18% Similarity=0.145 Sum_probs=62.9
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEE-EecceEEcCCCCEEEEEeC-CCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HIL-TSGVLTYTNDARFQVIHTD-GSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l-~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+.+.. +.|.|||+.++ ..+ ..... ...++||.+..+. ..+.++|+|++++++|
T Consensus 5 ~q~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~l~~~~~~-~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D 82 (113)
T 1h5b_A 5 EQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASG-TKENGRLKSAFDSERARYSTLHIRDAQLED 82 (113)
T ss_dssp EEECSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCEEEEEEESSS-EEEETTEEEECCSSSSSEEEEEECSCCGGG
T ss_pred EECCCEEEEecCCcEEEEEEECCCC-ceEEEEEECCCCCeEEEEEECCC-CccCCceEEEEccCCCCEEEEEECCCChhh
Confidence 4556778999999999999998754 68999998732 222 22211 2236799886543 5678999999999999
Q ss_pred CEEEEEeecC
Q psy14080 85 NGTYECQAQP 94 (113)
Q Consensus 85 ~G~Y~C~~~~ 94 (113)
+|+|+|.+..
T Consensus 83 sG~Y~C~~~n 92 (113)
T 1h5b_A 83 SGTYFCAAEA 92 (113)
T ss_dssp CEEEEEEEEC
T ss_pred CEEEEEEEec
Confidence 9999999964
No 34
>3moq_A NEW antigen receptor variable domain, P3(40) PEPT amyloid beta A4 protein; AB-ignar, AB-12Y-2, glycoprotein, membran protease inhibitor; 2.05A {Orectolobus maculatus} PDB: 2z8w_C 2z8v_C 1ves_A 1ver_A
Probab=99.75 E-value=7.4e-18 Score=109.11 Aligned_cols=79 Identities=23% Similarity=0.250 Sum_probs=63.6
Q ss_pred EeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++++|+|.+++. +.+.++|||+.++ ..+. ..++||.+..+...+.++|+|++++++|
T Consensus 4 ~Q~p~~v~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li------~~~~R~~~~~~~~~~~~sL~I~~v~~~D 77 (126)
T 3moq_A 4 DQTPRTATKETGESLTINCVLRDASFELKDTGWYRTKLGSTNEQSI------SIGGRYVETVNKGSKSFSLRISDLRVED 77 (126)
T ss_dssp EEECSEEEEETTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEEC------CCBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EECCceEEEeCCCCEEEEEEeecCccCCceEEEEEeCCCCCceEEE------EeCCcEEEEEeCCCCEEEEEECcCChHh
Confidence 556677899999999999999865 4678999998642 2221 2467999876666789999999999999
Q ss_pred CEEEEEeecC
Q psy14080 85 NGTYECQAQP 94 (113)
Q Consensus 85 ~G~Y~C~~~~ 94 (113)
+|+|+|++.+
T Consensus 78 sG~Y~C~~~~ 87 (126)
T 3moq_A 78 SGTYKCQAFY 87 (126)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEEE
Confidence 9999999953
No 35
>4gjt_B Poliovirus receptor-related protein 4; six-bladed -propeller, IGV-like fold, viral entry, MV-H, NEC BETA4/BETA5 groove; HET: NAG; 3.10A {Homo sapiens}
Probab=99.75 E-value=3e-18 Score=109.54 Aligned_cols=102 Identities=16% Similarity=0.131 Sum_probs=66.8
Q ss_pred ecceEEEecCCcEEEEEEEccCCC---CEEEEEecCC---CeEEE-ec-ceEEc----CCCCEEEEE-eCCCCcEEEEEc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVK---VRVSWVRRRD---WHILT-SG-VLTYT----NDARFQVIH-TDGSDDWNLQIK 78 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~---~~V~W~k~~~---~~~l~-~~-~~~~~----~~~R~~~~~-~~~~~~~~L~I~ 78 (113)
.+..+++.+|++|+|+|.++..+. ..|.|||+.. ...+. .. ..... -.+|+.+.. ....++++|+|+
T Consensus 6 ~p~~vtv~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I~ 85 (123)
T 4gjt_B 6 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 85 (123)
T ss_dssp CCSEEECCTTSEEEECCEECCCTTCCEEEEEEEECCCSSCCCEEEEECSSSCCCBCGGGTTTEECCCSSCCTTBCCEEEE
T ss_pred cCCEEEEEcCCCEEEEEEEeCCccCceeEEEEEEcCCCCCcceeEEEEecCCcEeCccceeEEEEecCCCcCCEEEEEEC
Confidence 345688999999999999986543 3689999863 22222 11 11011 135777642 224567899999
Q ss_pred cCCCCCCEEEEEeecCC--CCeeEEEEeceecccccC
Q psy14080 79 FLQKRDNGTYECQAQPY--TTTSHSQNAPGLGDLLMH 113 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~--~~~s~~~~L~V~g~~~~~ 113 (113)
|++.+|+|.|+|++.+. +..+..++|.|++...-|
T Consensus 86 ~v~~~DsG~Y~C~v~t~~~g~~~~~~~L~VlE~~~~~ 122 (123)
T 4gjt_B 86 NAVQADEGEYECRVSTFPAGSFQARLRLRVLEHHHHH 122 (123)
T ss_dssp SCCSSSCSEEEEEEEESSSCEEEEEEEEEC-------
T ss_pred CCChHHCEEEEEEEEECCCCeEEeEEEEEEEECccCC
Confidence 99999999999999653 456788999999876543
No 36
>3u6r_L Antibody 1:7 (light chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=99.75 E-value=1.3e-17 Score=110.09 Aligned_cols=99 Identities=17% Similarity=0.105 Sum_probs=72.1
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEE-EecceEE-cCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHIL-TSGVLTY-TNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l-~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.++.+..+++.+|++|+|+|.++......|.|||+.+ ...+ +...... ...+||.+.. ..+.++|+|++++++
T Consensus 3 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~--~~~~~sL~I~~l~~~ 80 (143)
T 3u6r_L 3 LTQSPATLSLSPGERATLSCRASQSVNKYLAWYQQKPGQAPRLLIYDASNRATGIPARFSGSG--SGTDFTLTISNLEPE 80 (143)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEECSCCGG
T ss_pred EEECCCEEEEeCCCCEEEEEEECCCCceeeEEEEECCCCCCEEEEEeCCccCCCccCcEeEEc--cCCEEEEEEccCccc
Confidence 4666778899999999999999877677899999863 2333 3222211 2367999863 457899999999999
Q ss_pred CCEEEEEeecCCC-CeeEEEEeceecc
Q psy14080 84 DNGTYECQAQPYT-TTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~~~-~~s~~~~L~V~g~ 109 (113)
|+|+|+|++.... .......|.|++.
T Consensus 81 DsG~Y~C~~~~~~~~fg~gt~L~V~~~ 107 (143)
T 3u6r_L 81 DFAVYYCQQRSDWVTFGGGTKVEIKAA 107 (143)
T ss_dssp GCEEEEEEECSSBCEECCCEEEEEC--
T ss_pred CCEEEEEEEecCCCEECCCEEEEECCC
Confidence 9999999996542 3344567777664
No 37
>3r8b_B G5-8, enterotoxin type B; immunoglobulin-like, OB-fold, toxin-immune system complex; 2.95A {Rattus norvegicus}
Probab=99.75 E-value=2.6e-17 Score=105.80 Aligned_cols=101 Identities=7% Similarity=0.019 Sum_probs=72.8
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEec---ceEE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSG---VLTY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~---~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
++.+..+++.+|++|+|+|.++......|.|||+.+ ..++... .... ...+||.+..+ +.+.++|+|++++
T Consensus 9 ~Q~p~~~~v~~G~~vtL~C~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~Rf~~~~~-~~~~~sL~I~~~~ 87 (125)
T 3r8b_B 9 TQSPRNKVAVTGEKVTLSCKQTNSYFNNMYWYRQDTGHELRLIFMSHGIRNVEKGDIPDGYKASRP-SQENFSLILELAT 87 (125)
T ss_dssp EEECSEEEEETTCCEEEEEEEESCCCSEEEEEEECTTSCEEEEEEESSTTCCEECSSCTTCEEEEE-ETTEEEEEETTCC
T ss_pred EecCCeEEEcCCCcEEEEEEECCCCCCeEEEEEECCCCCcEEEEEEcCCccccCCCCCCceEEEec-CCCEEEEEECCCC
Confidence 455667899999999999999876556899999873 2333221 1111 12579998753 3578999999999
Q ss_pred CCCCEEEEEeecCCC--CeeEEEEeceecccc
Q psy14080 82 KRDNGTYECQAQPYT--TTSHSQNAPGLGDLL 111 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~--~~s~~~~L~V~g~~~ 111 (113)
++|+|+|+|++.... .......|.|++++-
T Consensus 88 ~~Dsg~Y~C~~~~~~~~~fg~GT~l~V~~~l~ 119 (125)
T 3r8b_B 88 PSQTSVYFCASGGGGTLYFGAGTRLSVLYGSS 119 (125)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEEEBCC-
T ss_pred hhhCEEEEEEEcCCCCcEECCCEEEEEeeccc
Confidence 999999999996433 233556788888763
No 38
>3dmm_D T-cell surface glycoprotein CD8 beta chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=99.75 E-value=9.7e-18 Score=111.24 Aligned_cols=102 Identities=16% Similarity=0.134 Sum_probs=74.6
Q ss_pred eEeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCC---C---eEE-Eecc---eEEc---CCCCEEEEEeCCCCcEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRD---W---HIL-TSGV---LTYT---NDARFQVIHTDGSDDWN 74 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~---~---~~l-~~~~---~~~~---~~~R~~~~~~~~~~~~~ 74 (113)
.++....+++.+|++|+|+|.+++. ....|+|||+.. + .+| .... ..+. ..+||.+..+.+.+.++
T Consensus 4 v~Q~p~~~~v~~G~svtL~C~~s~~~~~~~v~Wyrq~~g~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~s 83 (150)
T 3dmm_D 4 LIQTPSSLLVQTNHTAKMSCEVKSISKLTSIYWLRERQDPKDKYFEFLASWSSSKGVLYGESVDKKRNIILESSDSRRPF 83 (150)
T ss_dssp CEEECSEEEEETTSCEEEEEECCCSSCCCEEEEEEEECCSSCCEEEEEEEEETTTEEEECTTTTTTCCEEEESTTSSSCE
T ss_pred cEECCCeEEEeCCCcEEEEEEecCCCCCceEEEEEeCCCCCCCccEEEEEEecCCceEeCCCCccCcEEEEEcCCCCEEE
Confidence 4566677899999999999999864 567899999963 1 233 2211 1111 26899987667778899
Q ss_pred EEEccCCCCCCEEEEEeecCCCC--eeEEEEeceeccc
Q psy14080 75 LQIKFLQKRDNGTYECQAQPYTT--TSHSQNAPGLGDL 110 (113)
Q Consensus 75 L~I~~v~~~D~G~Y~C~~~~~~~--~s~~~~L~V~g~~ 110 (113)
|+|.+++++|+|+|+|++..... ......|.|++++
T Consensus 84 L~I~~l~~~Dsg~Y~C~~~~~~~~~fG~GT~L~V~~~l 121 (150)
T 3dmm_D 84 LSIMNVKPEDSDFYFCATVGSPKMVFGTGTKLTVVDVL 121 (150)
T ss_dssp EEESSCCGGGCEEEEEEEECSSCEEECCCEEEEEESCC
T ss_pred EEECCCChhhCEEEEEEEecCCcceECCCEEEEEeCCC
Confidence 99999999999999999964332 2344578888764
No 39
>2coq_A NEW antigen receptor variable domain; IG VNAR, natural TYPE2, immune system; 2.10A {Orectolobus maculatus}
Probab=99.75 E-value=8.1e-18 Score=105.18 Aligned_cols=79 Identities=23% Similarity=0.280 Sum_probs=62.1
Q ss_pred EeecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCCe---EEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDWH---ILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~~---~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+++.. .+.|.|||+..+. .+. ..++||.+..+...+.++|+|++++++|
T Consensus 4 ~q~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~------~~~~r~~~~~~~~~~~~~L~I~~~~~~D 77 (108)
T 2coq_A 4 DQTPRIATKETGESLTINCVLRDTACALDSTNWYRTKLGSTKEQTI------SIGGRYSETVDEGSNSASLTIRDLRVED 77 (108)
T ss_dssp EEECSEEEECTTCCEEEEEEECCSSEEEEEEEEEEEETTCCCEEEC------CCBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EeCCceEEEcCCCCEEEEeEeCCCcCCCCEEEEEEcCCCCCcEEEE------EeCCceEEEEcCCCCEEEEEECCCCccc
Confidence 4556778999999999999998653 5689999986322 221 2357998765556678999999999999
Q ss_pred CEEEEEeecC
Q psy14080 85 NGTYECQAQP 94 (113)
Q Consensus 85 ~G~Y~C~~~~ 94 (113)
+|+|+|++..
T Consensus 78 sG~Y~C~~~~ 87 (108)
T 2coq_A 78 SGTYKCKAYR 87 (108)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEEe
Confidence 9999999954
No 40
>3t0v_A Immunoglobulin variable lambda domain; immunoglobulin fold, fluorogen activation, dimethylindole RE binding protein; HET: 1PE PE3; 1.45A {Homo sapiens} PDB: 3t0w_A* 3t0x_A* 3lrg_A 3lrh_A 2rhe_A
Probab=99.75 E-value=9.7e-18 Score=107.91 Aligned_cols=99 Identities=15% Similarity=0.056 Sum_probs=70.4
Q ss_pred eEeecceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEEEe-cceEE-cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHILTS-GVLTY-TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l~~-~~~~~-~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
+++ +..+++.+|++|+|+|.++... ...|.|||+.+ +..|.. ..... ...+||.+.. ..+.++|+|++++
T Consensus 4 v~Q-p~~v~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~--~~~~~sL~I~~l~ 80 (123)
T 3t0v_A 4 LTQ-SPSVSGTPGQKVTIFCSGSSSNVEDNSVYWYQQFPGTTPKVLIYNDDRRSSGVPDRFSGSK--SGTSASLAISGLR 80 (123)
T ss_dssp BEE-CCCEEECTTCCEEEEEECCTTTTTTSCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEECSCC
T ss_pred cCc-cCeEEEcCCCCEEEEEecCCCccCCCeEEEEEECCCCCCEEEEEECCcCCCCCcCCEEEEc--cCCEEEEEECCCC
Confidence 344 4578999999999999998653 47899999873 233332 22211 1357999864 4578999999999
Q ss_pred CCCCEEEEEeecCCC----CeeEEEEeceeccc
Q psy14080 82 KRDNGTYECQAQPYT----TTSHSQNAPGLGDL 110 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~----~~s~~~~L~V~g~~ 110 (113)
++|+|+|+|++.... ..-....|.|++..
T Consensus 81 ~~DsG~Y~C~~~~~~~~~~~fG~GT~l~V~~~~ 113 (123)
T 3t0v_A 81 SEDEADYYCLSWDDSLNGWVFGGGTKVTVLDAA 113 (123)
T ss_dssp GGGCEEEEEEEEETTTTEEEEBCCEEEEECCCC
T ss_pred HHHCEEEEEEEEcCCCCceEECCCEEEEEccCC
Confidence 999999999996432 22344677777654
No 41
>1mfa_H IGG1-lambda Se155-4 FAB (heavy chain); immunoglobulin; HET: GLA MMA; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy2_B
Probab=99.75 E-value=1.7e-17 Score=105.52 Aligned_cols=82 Identities=10% Similarity=0.129 Sum_probs=62.0
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eec---c-eEEc--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSG---V-LTYT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~---~-~~~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.++ ..+ ... . .... ..+||.+..+..++.++|+|+++
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (120)
T 1mfa_H 7 SGTVVARPGASVKMSCKASGYTFTNYWMHWIKQRPGQGLEWIGAIYPGNSATFYNHKFRAKTKLTAVTSTTTAYMELSSL 86 (120)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEeCCCCEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEeCCCCEEEEEECCC
Confidence 556789999999999999853 2568999998742 222 221 1 1111 24799998766678899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 87 ~~~Dsg~Y~C~~~~ 100 (120)
T 1mfa_H 87 TSEDSAVYYCTRGG 100 (120)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CHHHCEEEEEEEec
Confidence 99999999999964
No 42
>1z9m_A GAPA225; nectin-like, IG-like domain, V domain, cell adhesion; 2.40A {Homo sapiens}
Probab=99.75 E-value=3e-17 Score=107.10 Aligned_cols=98 Identities=15% Similarity=0.190 Sum_probs=77.4
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
.....++++.+|++|+|+|.+.+.+.+.|.|++.....+ +........++||.+... ..++++|+|.+++.+|+|.|+
T Consensus 42 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~~~~~~~i-~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~v~~~DsG~Y~ 119 (145)
T 1z9m_A 42 QPWTSDETVVAGGTVVLKCQVKDHEDSSLQWSNPAQQTL-YFGEKRALRDNRIQLVTS-TPHELSISISNVALADEGEYT 119 (145)
T ss_dssp CCBCCCEEEETTSCEEEEEECSCCTTCCEEEECTTCCEE-EETTEECSCCTTEEEEEE-CSSEEEEEECSCCGGGCEEEE
T ss_pred ecCCceEEEEcCCCEEEEEEEcCCCCcEEEEECCCCcEE-EECCceecccCCEEEecC-CCCeEEEEECCCChhhCEEEE
Confidence 345667899999999999999988888999997654433 434444445789987643 456789999999999999999
Q ss_pred EeecCCCCeeEEEEeceecc
Q psy14080 90 CQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 90 C~~~~~~~~s~~~~L~V~g~ 109 (113)
|.+...+..+..+.|.|.+.
T Consensus 120 C~~~n~~~~~~~~~L~V~~~ 139 (145)
T 1z9m_A 120 CSIFTMPVRTAKSLVTVLGI 139 (145)
T ss_dssp EEECSSSCEEEEEEEEEECC
T ss_pred EEEEcCCCceEEEEEEEEeC
Confidence 99965477788899998763
No 43
>1zvy_A Immunoglobulin heavy chain antibody variable DOMA; beta sandwich, immunoglobulin fold, protein protein heteroco alpha-beta orthogonal bundle, hydrolase-immune system compl; 1.63A {Camelus dromedarius} SCOP: b.1.1.1
Probab=99.75 E-value=7.5e-18 Score=110.13 Aligned_cols=101 Identities=11% Similarity=0.060 Sum_probs=68.4
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eecc---e-EE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSGV---L-TY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~~---~-~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.+ +..| .... . .. ...+||.+..+..++.++|+|+++
T Consensus 7 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 86 (136)
T 1zvy_A 7 SGGGSVQAGGSLRLSCAASGSTDSIEYMTWFRQAPGKAREGVAALYTHTGNTYYTDSVKGRFTISQDKAKNMAYLRMDSV 86 (136)
T ss_dssp ECCEECCTTCCEEEEEEEESCSTTCCEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEeCCCCEEEEEEecCCCCCCcEEEEEEECCCCCCEEEEEEeCCCCceeeCcccCCcEEEEEcCCCCEEEEEECCC
Confidence 445789999999999999853 357899999974 2333 2211 1 11 125799998665678899999999
Q ss_pred CCCCCEEEEEeecCC-----------C--CeeEEEEeceecccccC
Q psy14080 81 QKRDNGTYECQAQPY-----------T--TTSHSQNAPGLGDLLMH 113 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~-----------~--~~s~~~~L~V~g~~~~~ 113 (113)
+++|+|+|+|++... . ..-....|.|++..+.|
T Consensus 87 ~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~fG~GT~l~V~~~~~~~ 132 (136)
T 1zvy_A 87 KSEDTAIYTCGATRKYVPVRFALDQSSYDYWGQGTQVTVSSRGRHH 132 (136)
T ss_dssp CGGGCEEEEEEECSSCCCGGGTTCGGGCSEECCCEEEEC-------
T ss_pred ChhHCEEEEEEEEeCCccccccccccccceECCCEEEEEccCcccc
Confidence 999999999999643 1 12356688888887765
No 44
>3qp3_A Titin; I-SET IG-like, sarcomere, M-BAND, transferase; 2.00A {Homo sapiens}
Probab=99.75 E-value=1.8e-17 Score=101.70 Aligned_cols=95 Identities=15% Similarity=0.036 Sum_probs=74.2
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.+.. ...++++.+|+++.|.|.+.+.+.+.|.|+|.. ..+ ..+.|+.+.. +.+..+|.|.+++.+
T Consensus 7 ~~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~--~~~-------~~~~~~~~~~--~~~~~~L~i~~~~~~ 74 (103)
T 3qp3_A 7 HAPRITL-RMRSHRVPCGQNTRFILNVQSKPTAEVKWYHNG--VEL-------QESSKIHYTN--TSGVLTLEILDCHTD 74 (103)
T ss_dssp EEEEEEE-CCCCEEEETTCCEEEEEEEEEESCCEEEEEETT--EEC-------CCCSSEEEEE--ETTEEEEEECSCCGG
T ss_pred CCCEEEe-CCcceEEeCCCeEEEEEEEEecCCCEEEEEECC--EEC-------CCCCCEEEEE--CCCEEEEEEcCCCcc
Confidence 3555544 346789999999999999999999999999843 222 2356787763 345679999999999
Q ss_pred CCEEEEEee-cCCCCeeEEEEeceeccc
Q psy14080 84 DNGTYECQA-QPYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 84 D~G~Y~C~~-~~~~~~s~~~~L~V~g~~ 110 (113)
|+|.|+|.+ +..+..+..+.|.|.|..
T Consensus 75 D~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 102 (103)
T 3qp3_A 75 DSGTYRAVCTNYKGEASDYATLDVTGGD 102 (103)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEECC-
T ss_pred cCEEEEEEEEeCCCcEEEEEEEEEECCC
Confidence 999999999 556778889999998863
No 45
>1nko_A Sialic acid binding IG-like lectin 7; immunoglobulin, siglec7, immune system; 1.45A {Homo sapiens} SCOP: b.1.1.1 PDB: 2g5r_A* 1o7v_A* 2df3_A* 1o7s_A* 2hrl_A*
Probab=99.75 E-value=3.3e-18 Score=110.08 Aligned_cols=101 Identities=12% Similarity=0.042 Sum_probs=69.0
Q ss_pred eeEeecceEEEecCCcEEEEEEEc-------cCCCCEEEEEecCCCe----EEEecc-eE---EcCCCCEEEEEeCCCCc
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVR-------DIVKVRVSWVRRRDWH----ILTSGV-LT---YTNDARFQVIHTDGSDD 72 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~-------~~~~~~V~W~k~~~~~----~l~~~~-~~---~~~~~R~~~~~~~~~~~ 72 (113)
...+.+..+++.+|++|+|+|.++ +.....|.|||+.... ++.... .. ....+||.+..+...++
T Consensus 8 ~~~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~R~~~~~~~~~~~ 87 (132)
T 1nko_A 8 YSLTMQSSVTVQEGMCVHVRCSFSYPVDSDTDSDPVHGYWFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKN 87 (132)
T ss_dssp CEEEECSEEEEETTCCEEECEEEECCCCTTTTTSCCEEEEEEC-----CCSCSEESCTTCCCCGGGTTTEEECSCGGGTB
T ss_pred eEEeCCCEEEEcCCCeEEEEccccCCCccccCCCccEEEEEECCCCCCcccEEEeCCCccccccccCccEEEeCCCCCCc
Confidence 344556778999999999999997 3345789999987432 222211 10 12357999875444578
Q ss_pred EEEEEccCCCCCCEEEEEeecCCCC---e-eEEEEeceec
Q psy14080 73 WNLQIKFLQKRDNGTYECQAQPYTT---T-SHSQNAPGLG 108 (113)
Q Consensus 73 ~~L~I~~v~~~D~G~Y~C~~~~~~~---~-s~~~~L~V~g 108 (113)
++|+|++++++|+|+|+|++...+. . ...+.|.|.+
T Consensus 88 ~sL~I~~v~~~DsG~Y~C~v~~~~~~~~~~~~~~~l~V~~ 127 (132)
T 1nko_A 88 CTLSIRDARMSDAGRYFFRMEKGNIKWNYKYDQLSVNVTA 127 (132)
T ss_dssp CCEEECSCCGGGCEEEEEEEEETTEEEECTTSCEEEEEEC
T ss_pred eEEEEcccCcccCeeEEEEEEcCCCcccccCCceEEEecc
Confidence 8999999999999999999965431 1 2346777765
No 46
>1u9k_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immunity, immune system receptor, immune system; 1.76A {Mus musculus} SCOP: b.1.1.1
Probab=99.75 E-value=3.8e-18 Score=107.73 Aligned_cols=85 Identities=15% Similarity=0.109 Sum_probs=63.2
Q ss_pred ecceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eecc--e--EEcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSGV--L--TYTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~~--~--~~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
.+..+++.+|++|+|+|.+++. ....+.|||+.+ ...+ .... . ....++||.+..+..++.++|+|++++
T Consensus 5 ~p~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 84 (114)
T 1u9k_A 5 EEERYDLVEGQTLTVKCPFNIMKYANSQKAWQRLPDGKEPLTLVVTQRPFTRPSEVHMGKFTLKHDPSEAMLQVQMTDLQ 84 (114)
T ss_dssp CCEEEEECTTCCEEEEEECCHHHHTTSEEEEEECCTTSCCEEEEECCSSTTSCEEEEETTEEEEEEGGGTEEEEEECSCC
T ss_pred CCccEEEeCCCcEEEEeEecCcccCCceEEEEEeCCCCCCEEEEEEcCCCCccccccCCcEEEEecCcCCEEEEEECCCC
Confidence 3456889999999999999754 246899999973 2333 3221 1 111258999886666788999999999
Q ss_pred CCCCEEEEEeecCCC
Q psy14080 82 KRDNGTYECQAQPYT 96 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~ 96 (113)
++|+|+|+|++...+
T Consensus 85 ~~Dsg~Y~C~~~~~~ 99 (114)
T 1u9k_A 85 VTDSGLYRCVIYHPP 99 (114)
T ss_dssp GGGCEEEEEEEECTT
T ss_pred hHHCEEEEEEEecCC
Confidence 999999999996543
No 47
>3bj9_1 Immunoglobulin IOTA chain, immunoglobulin lambda- like polypeptide 1; immunoglobulin domain, beta sheet, polymorphism, immune system; 2.00A {Homo sapiens} PDB: 2h3n_A
Probab=99.75 E-value=2.7e-17 Score=103.64 Aligned_cols=96 Identities=18% Similarity=0.101 Sum_probs=67.5
Q ss_pred cceEEEecCCcEEEEEEEccC---CCCEEEEEecCC---Ce-EEEec--ceE-Ec--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI---VKVRVSWVRRRD---WH-ILTSG--VLT-YT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~---~~~~V~W~k~~~---~~-~l~~~--~~~-~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
.+.+++.+|++|+|+|.++.. +...|.|||+.+ +. ++... ... .. ..+||.+..+.....++|+|+++
T Consensus 5 ~~~~~~~~G~~v~L~C~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~ 84 (116)
T 3bj9_1 5 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISEL 84 (116)
T ss_dssp CSEEEEETTCCEEEEEEECSSSCGGGCCEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSC
T ss_pred CCcEEEcCCCcEEEEEEeecCccCCCceEEEEEeCCCCCcEEEEEEecCCCceeCccCCCcEEEEecCCCceEEEEECCC
Confidence 345889999999999999854 456899999873 23 33221 111 11 25799987654445679999999
Q ss_pred CCCCCEEEEEeecCCC--CeeEEEEeceec
Q psy14080 81 QKRDNGTYECQAQPYT--TTSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~--~~s~~~~L~V~g 108 (113)
+++|+|+|+|++.... .......|.|++
T Consensus 85 ~~~DsG~Y~C~~~~~~~~~fg~gT~L~V~~ 114 (116)
T 3bj9_1 85 QPEDEAMYYCAMGARSTHVFGSGTQLTVLS 114 (116)
T ss_dssp CGGGCEEEEEEECCSSCCEECCCEEEEEES
T ss_pred ChhHCEEEEEEEeCCCCcEECCCEEEEEec
Confidence 9999999999996532 223456777765
No 48
>2frg_P TREM-like transcript-1; immunoglobulin-like, beta-sandwich, cell surface receptor, triggering receptor, platelet receptor, ITIM, immune system; 1.19A {Homo sapiens}
Probab=99.75 E-value=1.4e-17 Score=104.69 Aligned_cols=94 Identities=18% Similarity=0.118 Sum_probs=67.2
Q ss_pred cceEEEecCCcEEEEEEEccC-CCCEEEEEecCCCe--EEEe--cceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDWH--ILTS--GVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~~--~l~~--~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
+..+++.+|++|+|+|.++.. ....+.||||.++. .+.. +.......+||.+..+ .++.++|+|.+++++|+|+
T Consensus 4 p~~v~~~~G~svtl~C~~s~~~~~~~~~Wyrq~~g~~~~li~~~~~~~~~~~~R~s~~~~-~~~~~~L~I~~l~~~Dsg~ 82 (106)
T 2frg_P 4 PEVLQAPVGSSILVQCHYRLQDVKAQKVWCRFLPEGCQPLVSSAVDRRAPAGRRTFLTDL-GGGLLQVEMVTLQEEDAGE 82 (106)
T ss_dssp CEEEEECTTCCEEEEEECCGGGTTSEEEEEEEETTEEEEEEECCBTCEEEETTTEEEEEE-ETTEEEEEECSCCGGGCEE
T ss_pred CcEEEEecCCcEEEEeEecCCcccCcEEEEECCCCCCcEEEEeCCcEeeecCCCEEEEcC-CCCEEEEEEccCCHHHCEE
Confidence 445788999999999999743 34578999998643 2221 1212234689998533 4567999999999999999
Q ss_pred EEEeecCCC--CeeEEEEecee
Q psy14080 88 YECQAQPYT--TTSHSQNAPGL 107 (113)
Q Consensus 88 Y~C~~~~~~--~~s~~~~L~V~ 107 (113)
|+|++...+ .....+.|.|+
T Consensus 83 Y~C~~~~~~~~d~~~~v~L~V~ 104 (106)
T 2frg_P 83 YGCMVDGARGPQILHRVSLNIL 104 (106)
T ss_dssp EEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEeecCCCCCEeEEEEEEEe
Confidence 999996543 22466777774
No 49
>3bia_X T-cell immunoglobulin and mucin domain- containing protein 4; beta barrel, immunoglobulin fold, IGV domain, TIM, glycoprotein; HET: TLA; 2.20A {Mus musculus} PDB: 3bi9_X* 3bib_X*
Probab=99.75 E-value=1.1e-17 Score=105.51 Aligned_cols=95 Identities=12% Similarity=0.142 Sum_probs=69.4
Q ss_pred ceEEEecCCcEEEEEEEcc--CCCCEEEEEecC-CC----e-EEEecc--eEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 14 QISTGFLAVFSYSDKTVRD--IVKVRVSWVRRR-DW----H-ILTSGV--LTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~--~~~~~V~W~k~~-~~----~-~l~~~~--~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
..+++.+|++|+|+|.++. .....|.|||+. ++ . ++.... .....++||.+..+...++++|+|++++++
T Consensus 4 ~~v~~~~G~~vtL~C~~~~~~~~~~~v~W~r~~~~~~~~~~~l~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~ 83 (116)
T 3bia_X 4 DTIIGFLGQPVTLPCHYLSWSQSRNSMCWGKGSCPNSKCNAELLRTDGTRIISRKSTKYTLLGKVQFGEVSLTISNTNRG 83 (116)
T ss_dssp EEEEEETTSCEEECCBCTTCCTTTCEEEEEESSCCSSSCTTEEEEECSSSEEEESSTTEEECSCGGGTBCCEEECSCCGG
T ss_pred cEEEEeeCCcEEEEEEeeCCCCCeEEEEEeeecCCCCCCceEEEEECCcccccccCceEEEeccCCCCEEEEEEccCChh
Confidence 4578999999999999973 234579999997 43 2 333321 223346799876545667899999999999
Q ss_pred CCEEEEEeecCCC---CeeEEEEeceec
Q psy14080 84 DNGTYECQAQPYT---TTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~~~~---~~s~~~~L~V~g 108 (113)
|+|+|+|++...+ .....+.|.|..
T Consensus 84 Dsg~Y~C~v~~~~~~~~~~~~v~L~V~~ 111 (116)
T 3bia_X 84 DSGVYCCRIEVPGWFNDVKKNVRLELRR 111 (116)
T ss_dssp GCEEEEEEEECSSSSCCEEEEEEEEEEC
T ss_pred HCEEEEEEEEcCCcccceEEEEEEEEec
Confidence 9999999996533 335678888765
No 50
>1j05_L T84.66 antibody, anti-CEA MAB T84.66, light chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1qfw_L* 1qnz_L 3iy3_A 3iy4_A
Probab=99.75 E-value=8.8e-18 Score=105.27 Aligned_cols=85 Identities=18% Similarity=0.126 Sum_probs=63.2
Q ss_pred eEeecceEEEecCCcEEEEEEEccCC----CCEEEEEecCC---Ce-EEEecceEE-cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIV----KVRVSWVRRRD---WH-ILTSGVLTY-TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~----~~~V~W~k~~~---~~-~l~~~~~~~-~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
.++.+..+++.+|++|+|+|.+++.+ .+.|.|||+.+ .. ++....... ...+||.+.. +++.++|+|++
T Consensus 4 v~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~ 81 (111)
T 1j05_L 4 LTQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG--SRTDFTLIIDP 81 (111)
T ss_dssp EEEECSEEECCTTSCEEEEEEESSCCEETTEECEEEEEECTTSCEEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESS
T ss_pred EEEeCCEEEEeCCCCEEEEeecCCCcccCCCceEEEEEeCCCCCCEEEEEecCcCCCCCCCcEEEEc--cCCEEEEEECC
Confidence 34556678999999999999998765 46899999863 22 232222111 1257999863 45789999999
Q ss_pred CCCCCCEEEEEeecCC
Q psy14080 80 LQKRDNGTYECQAQPY 95 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~ 95 (113)
++++|+|+|+|++...
T Consensus 82 v~~~DsG~Y~C~~~~~ 97 (111)
T 1j05_L 82 VEADDVATYYCQQTNE 97 (111)
T ss_dssp CCGGGCEEEEEEECSS
T ss_pred CCcccCEEEEEEEecC
Confidence 9999999999999653
No 51
>3iy0_H FAB 14, heavy domain; cryoem, neutralizing antibody, parvovirus, canine, feline, FAB footprint, immune system; 12.50A {Mus musculus}
Probab=99.75 E-value=1.1e-17 Score=106.78 Aligned_cols=81 Identities=11% Similarity=0.021 Sum_probs=61.6
Q ss_pred ceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eec--c--eEE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSG--V--LTY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~--~--~~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
..+++.+|++|+|+|.++.. ....++|||+.+ +..| ... . ... ...+||.+..+..++.++|+|++++
T Consensus 8 ~~~~v~~G~~vtL~C~~s~~~~~~~~~~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~ 87 (120)
T 3iy0_H 8 GTELVAPGGGVKLSCGASGYTFTNYDMNWVRQRPGAGLEWIGWIFPGDGSARGNEKFGGAAALAAAAAGGTAYMGLGGLS 87 (120)
T ss_dssp CCEEECSSCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEecCCCCEEEEEEeECCCccCCeEEEEEECCCCCCEEEEEEeCCCCceecChhhcCcEEEEEecCCCEEEEEECCCC
Confidence 35889999999999999853 346799999874 2333 221 1 111 2358999987666789999999999
Q ss_pred CCCCEEEEEeecC
Q psy14080 82 KRDNGTYECQAQP 94 (113)
Q Consensus 82 ~~D~G~Y~C~~~~ 94 (113)
++|+|+|+|++..
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (120)
T 3iy0_H 88 SEDSGVYFCARRG 100 (120)
T ss_dssp GGGCEEEEEEEES
T ss_pred hHHCEEEEEEEEe
Confidence 9999999999965
No 52
>1rjc_A 1D2L19, camelid heavy chain antibody; beta sandwich, immunoglobulin fold, protein-protein hetero C alpha-beta orthogonal bundle, immune system-hydrolase compl; 1.40A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1ri8_A 1xfp_A 1jtt_A 2x6m_A 1zmy_A 1f2x_K
Probab=99.74 E-value=1e-17 Score=109.57 Aligned_cols=101 Identities=12% Similarity=0.082 Sum_probs=67.2
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eec---c-eEEc--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSG---V-LTYT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~---~-~~~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.+ +..| ... . .... ..+||.+..+..++.++|+|+++
T Consensus 7 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 86 (137)
T 1rjc_A 7 SGGGSVQAGQSLRLSCATSGATSSSNCMGWFRQAPGKEREGVAVIDTGRGNTAYADSVQGRLTISLDNAKNTLYLQMNSL 86 (137)
T ss_dssp BCCEEECTTCCEEEEEECC-CTTTCSEEEEEEECTTSCCEEEEEEETTTCCEEECTTTTTTEEEEEEC--CEEEEEECSC
T ss_pred cCCEEEecCCCEEEEEEecCCcCCCcEEEEEEECCCCCCEEEEEEECCCCceecCcccCCcEEEEEcCCCCEEEEEECCC
Confidence 445789999999999999753 357899999974 2333 221 1 1111 25799998766678899999999
Q ss_pred CCCCCEEEEEeecCC------------C--CeeEEEEeceecccccC
Q psy14080 81 QKRDNGTYECQAQPY------------T--TTSHSQNAPGLGDLLMH 113 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~------------~--~~s~~~~L~V~g~~~~~ 113 (113)
+++|+|+|+|++... . ..-....|.|++..+.|
T Consensus 87 ~~~Dsg~Y~C~~~~~~~~~~~~~~~~~~~~~fG~GT~l~V~~~~~~~ 133 (137)
T 1rjc_A 87 KPEDTAMYYCAADTSTWYRGYCGTNPNYFSYWGQGTQVTVSSRGRHH 133 (137)
T ss_dssp CGGGCEEEEEEECCTTSCCSSCCCCGGGCCEECCCEEEEEC------
T ss_pred CHHHCEEEEEEEEcCCccccccccccccccEECCCEEEEEccCcccc
Confidence 999999999999643 1 12355678888887765
No 53
>1yc7_A Anti-VSG immunoglobulin heavy chain variable domain caban33; antibody, camel antibody, immune system; 1.60A {Camelus dromedarius} PDB: 1yc8_A 1yzz_A
Probab=99.74 E-value=1.7e-17 Score=106.69 Aligned_cols=98 Identities=16% Similarity=0.169 Sum_probs=67.9
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eec---ceEE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSG---VLTY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~---~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.++ ..| ... .... ...+||.+..+..++.++|+|++++
T Consensus 7 p~~~~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~ 86 (124)
T 1yc7_A 7 SGGGSVQAGGSLRLSCAVSGSTYSPCTTGWYRQAPGKEREWVSSISSPGTIYYQDSVKGRFTISRDNAKNTVYLQMNSLQ 86 (124)
T ss_dssp ECCEEECTTCCEEEEEEEESCCSSCEEEEEEEECTTSCEEEEEEECSTTCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEecCCCEEEEEEEeCCCcCCCEEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 456889999999999999853 3568999999742 222 221 1111 1257999987666788999999999
Q ss_pred CCCCEEEEEeecCC---CC--eeEEEEeceeccc
Q psy14080 82 KRDNGTYECQAQPY---TT--TSHSQNAPGLGDL 110 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~---~~--~s~~~~L~V~g~~ 110 (113)
++|+|+|+|++... .. .-....|.|+...
T Consensus 87 ~~Dsg~Y~C~~~~~~~~~~~~fG~GT~l~v~~~~ 120 (124)
T 1yc7_A 87 REDTGMYYCQIQCGVRSIREYWGQGTQVTVSSHH 120 (124)
T ss_dssp GGGCEEEEEEEEECSSSCEEEECCCEEEEEC---
T ss_pred HHHCEEEEEEEEeCCCcccceECCCEEEEEeccc
Confidence 99999999999643 21 1234566666543
No 54
>1zvh_A Immunoglobulin heavy chain antibody variable domain; beta sandwich, immunoglobulin fold, protein-protein heterocomplex; 1.50A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 3dwt_A 1g6v_K 1zv5_A 1kxq_E
Probab=99.74 E-value=6.9e-18 Score=109.84 Aligned_cols=101 Identities=14% Similarity=0.075 Sum_probs=68.5
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eecc----eEEc--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSGV----LTYT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~~----~~~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.+ +..| .... .... ..+||.+..+..++.++|+|+++
T Consensus 7 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 86 (134)
T 1zvh_A 7 SGGGSVQAGGSLRLSCAASGYIASINYLGWFRQAPGKEREGVAAVSPAGGTPYYADSVKGRFTVSLDNAENTVYLQMNSL 86 (134)
T ss_dssp ECCEEECTTCCEEEEEEEEESGGGEEEEEEEEECTTSCCEEEEEECTTTCCEEECTTTBTTBEEEEETTTTEEEEEECSC
T ss_pred CCCEEEccCCCEEEEEEeCCCCcCCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCcEEEEEcCCCCEEEEEECCC
Confidence 446789999999999999853 346799999974 2333 2211 1111 24799998766678899999999
Q ss_pred CCCCCEEEEEeecCC---------C--CeeEEEEeceecccccC
Q psy14080 81 QKRDNGTYECQAQPY---------T--TTSHSQNAPGLGDLLMH 113 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~---------~--~~s~~~~L~V~g~~~~~ 113 (113)
+++|+|+|+|++... . ..-....|.|++..+.|
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~fG~GT~l~V~~~~~~~ 130 (134)
T 1zvh_A 87 KPEDTALYYCAAARQGWYIPLNSYGYNYWGQGTQVTVSSRGRHH 130 (134)
T ss_dssp CGGGCEEEEEEEEESSCCCTTCGGGEEEECCCEEEEEC------
T ss_pred CHHHCEEEEEEEecCcccccccccCccEECCCEEEEEccccccc
Confidence 999999999999643 1 12245678888777654
No 55
>1q8m_A Triggering receptor expressed on myeloid cells 1; V-type IG-like domain, immunoglobulin-like, immune system receptor; HET: GSH; 2.60A {Homo sapiens} SCOP: b.1.1.1
Probab=99.74 E-value=2.3e-17 Score=107.16 Aligned_cols=86 Identities=13% Similarity=0.016 Sum_probs=63.9
Q ss_pred eEeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEEEe-cceE----EcCCCCEEEEEeCCCCcEEEEEc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HILTS-GVLT----YTNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l~~-~~~~----~~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
.++....+++.+|++++|+|.+++. ....+.||||.++ ..|.. .... ...++||.+..++.++.++|+|.
T Consensus 7 v~Q~p~~vs~~~G~svtL~C~~s~~~~~~~~~~WyrQ~pg~~~~~li~~~~~~~~~~~~~~gRfsis~~~s~~~~~LtIs 86 (127)
T 1q8m_A 7 TKLTEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMV 86 (127)
T ss_dssp EEECEEEEEEETTCCEEEEEECCCGGGTTSCEEEEEEETTTEEEEEEECCSSCCSSCCEEETTEEEEEETTTTEEEEEEC
T ss_pred EEecCCEEEEecCCCEEEEEEECCcccCCCEEEEEEeCCCCCCEEEEEEcCCCceeccccCCcEEEEEeCCCCEEEEEEC
Confidence 3455566899999999999999743 3456899999853 22221 1100 11237999987777889999999
Q ss_pred cCCCCCCEEEEEeecC
Q psy14080 79 FLQKRDNGTYECQAQP 94 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~ 94 (113)
+++++|+|+|+|++..
T Consensus 87 ~lq~eDsa~Y~Ca~~~ 102 (127)
T 1q8m_A 87 NLQVEDSGLYQCVIYQ 102 (127)
T ss_dssp SCCGGGCEEEEEEECC
T ss_pred CCCHHHCEEEEEEEEC
Confidence 9999999999999965
No 56
>1tvd_A T cell receptor, ES204 V delta; immunoreceptor, TCR, delta chain, variable domain; 1.90A {Homo sapiens} SCOP: b.1.1.1
Probab=99.74 E-value=1e-17 Score=105.74 Aligned_cols=85 Identities=19% Similarity=0.175 Sum_probs=64.0
Q ss_pred EeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCC---CeEE-Eec-ceEEc---CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRD---WHIL-TSG-VLTYT---NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~---~~~l-~~~-~~~~~---~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
++.+..+++.+|++|+|+|.++.. +...|.|||+.. ...+ ... ..... .++||.+..+...+.++|+|+++
T Consensus 4 ~q~p~~~~~~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 83 (116)
T 1tvd_A 4 TQSSPDQTVASGSEVVLLCTYDTVYSNPDLFWYRIRPDYSFQFVFYGDDSRSEGADFTQGRFSVKHILTQKAFHLVISPV 83 (116)
T ss_dssp ECCSCCEEEETTCCEEECCEEECCSSSCCEEEEEECTTSCEEEEEEECSSCEEECGGGTTTEEEEEEGGGTEEEEEESSC
T ss_pred ecCCCcEEEecCCeEEEEeEeEcCCCCcEEEEEEeCCCCCcEEEEEECCcccccCcccCCCEEEEEecCCCEEEEEEccC
Confidence 345667899999999999999854 456899999873 2223 222 11111 26899987655667899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 84 ~~~DsG~Y~C~~~~ 97 (116)
T 1tvd_A 84 RTEDSATYYCAFTL 97 (116)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred ChHHCEEEEEEEeC
Confidence 99999999999965
No 57
>2ywz_A NEW antigen receptor variable domain; IG VNAR, immune system; 2.21A {Orectolobus maculatus} PDB: 2ywy_A
Probab=99.74 E-value=1.8e-17 Score=104.17 Aligned_cols=79 Identities=22% Similarity=0.236 Sum_probs=62.6
Q ss_pred EeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCCe---EEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDWH---ILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~~---~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+++. +.+.|.|||+..+. .+. ..++||.+..+...+.++|+|++++++|
T Consensus 4 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~------~~~~r~~~~~~~~~~~~~L~I~~v~~~D 77 (111)
T 2ywz_A 4 DQTPRTITKETGESLTIKCVLKDHSCGLSSTTWYRTQLGSTNEKTI------SIGGRYDETVDKGSKSFSLRISDLRVED 77 (111)
T ss_dssp EEECSEEEECTTCCEEEEEEEESCSSCCCEEEEEEEETTCCCCEEC------CSBTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EECCCcEEEccCCCEEEEeEECCCCCCCCEEEEEEeCCCCCceEee------EeCCCEEEEEeCCCCEEEEEECCCChhc
Confidence 455677899999999999999865 46799999986321 221 2357998765556678999999999999
Q ss_pred CEEEEEeecC
Q psy14080 85 NGTYECQAQP 94 (113)
Q Consensus 85 ~G~Y~C~~~~ 94 (113)
+|+|+|++..
T Consensus 78 sG~Y~C~~~~ 87 (111)
T 2ywz_A 78 SGTYKCQADY 87 (111)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEEc
Confidence 9999999964
No 58
>1u2h_A APEG-1, aortic preferentially expressed protein 1; structural genomics, IG-fold I-SET, RGD motif, homophilic adhesion, arterial smooth muscle cells; 0.96A {Homo sapiens}
Probab=99.74 E-value=3.2e-17 Score=99.77 Aligned_cols=94 Identities=20% Similarity=0.205 Sum_probs=70.9
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+.. ....+++.+|+++.|.|.+.+.+.+.|.|+|.. ..+. ..+.|+... .+.+.++|.|.+++.+|
T Consensus 5 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~~--~~~~------~~~~~~~~~--~~~~~~~L~i~~~~~~D 73 (99)
T 1u2h_A 5 PPTFKV-SLMDQSVREGQDVIMSIRVQGEPKPVVSWLRNR--QPVR------PDQRRFAEE--AEGGLCRLRILAAERGD 73 (99)
T ss_dssp EEEEEE-CCCCEEEETTCCEEEEEEEEEESCCEEEEEETT--EECC------CBTTEEEEE--CGGGEEEEEESSCCGGG
T ss_pred CCEEEE-cCCceEecCCCEEEEEEEEEEcCCCEEEEEECC--EECC------CCCCEEEEE--CCCCEEEEEEccCCcCC
Confidence 444443 455678999999999999999888999999843 2221 124456554 33456799999999999
Q ss_pred CEEEEEee-cCCCCeeEEEEeceecc
Q psy14080 85 NGTYECQA-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~-~~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+ +..+..+..+.|.|.|+
T Consensus 74 ~G~Y~C~a~N~~g~~~~~~~l~V~~~ 99 (99)
T 1u2h_A 74 AGFYTCKAVNEYGARQCEARLEVRGE 99 (99)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred CEEEEEEEEECCCceeEEEEEEEECC
Confidence 99999999 45677788899999874
No 59
>2eys_A NKT15; natural killer T cell receptor, immune system; 2.21A {Homo sapiens} PDB: 2eyr_A 2eyt_A 3huj_E* 3tyf_A 3tzv_A* 3sdx_E* 2po6_C* 2cde_A 3to4_C*
Probab=99.74 E-value=5.9e-17 Score=112.64 Aligned_cols=101 Identities=10% Similarity=0.025 Sum_probs=74.6
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---Ce-EEE-ecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WH-ILT-SGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~-~l~-~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.++.+..+++.+|++|+|+|.+++.....|+||||.+ .. +++ ........++||.+..+..++.++|+|++++.+
T Consensus 6 v~Q~p~~~~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~ 85 (210)
T 2eys_A 6 VEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTGRGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQLS 85 (210)
T ss_dssp EEEECSEEEEETTCCEEEEEEECCSSCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGG
T ss_pred EEEeCCEEEEecCCCEEEEEEECCCCCCeEEEEEeCCCCCCEEEEEEecCCCCccCCCEEEEEcCCCCEEEEEEccCCcc
Confidence 3455677899999999999999877667899999974 22 333 121111236899998767778899999999999
Q ss_pred CCEEEEEeecCC----CCe--eEEEEeceecc
Q psy14080 84 DNGTYECQAQPY----TTT--SHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~~----~~~--s~~~~L~V~g~ 109 (113)
|+|+|+|++... ... .....|.|++.
T Consensus 86 Dsg~Y~C~~~~~~~~~~~~~fg~gt~L~V~~~ 117 (210)
T 2eys_A 86 DSASYICVVSDRGSTLGRLYFGRGTQLTVWPD 117 (210)
T ss_dssp GCEEEEEEEESCSSTTCCEEECCCEEEEEECC
T ss_pred cCceEEEEEEccCCCcccceECCCEEEEEECC
Confidence 999999999652 211 23357777764
No 60
>2ol3_A BM3.3 T-cell receptor alpha-chain; T cell receptor, class I MHC, H-2KBM8, TCR-PMHC complex, IMM system; HET: NAG; 2.90A {Mus musculus} SCOP: b.1.1.1
Probab=99.74 E-value=3.1e-18 Score=112.74 Aligned_cols=101 Identities=10% Similarity=-0.010 Sum_probs=71.1
Q ss_pred EeecceEEEecCCcEEEEEEEccCC-CCEEEEEecCCC---eEE-Eec-ce-EEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRDW---HIL-TSG-VL-TYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~---~~l-~~~-~~-~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
++....+++.+|++|+|+|.++... .+.|+|||+..+ ..| ... .. ....++||.+..+...+.++|+|+++++
T Consensus 4 ~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~ 83 (142)
T 2ol3_A 4 TQTQTSISVMEKTTVTMDCVYETQDSSYFLFWYKQTASGEIVFLIRQDSYKKENATVGHYSLNFQKPKSSIGLIITATQI 83 (142)
T ss_dssp BCCCSEEEEETTCCEEECCBCCCCCSSCEEEEEEECTTCCEEEEEEEETTCSSCCEETTEEECCBGGGTBCCEEECSCCT
T ss_pred EecCCeEEEecCCCEEEEEEecCCcCCceEEEEEeCCCCCcEEEEEECCCCcccccCCCEEEEecCCCCEEEEEECCCCh
Confidence 4456678999999999999998654 458999999742 233 222 11 1112579998644566789999999999
Q ss_pred CCCEEEEEeecC-----CC--CeeEEEEeceeccc
Q psy14080 83 RDNGTYECQAQP-----YT--TTSHSQNAPGLGDL 110 (113)
Q Consensus 83 ~D~G~Y~C~~~~-----~~--~~s~~~~L~V~g~~ 110 (113)
+|+|+|+|++.. .. .......|.|++..
T Consensus 84 ~Dsg~Y~C~~~~~~~~~~~~~~fg~GT~L~V~~~~ 118 (142)
T 2ol3_A 84 EDSAVYFCAMRGDYGGSGNKLIFGTGTLLSVKPGS 118 (142)
T ss_dssp TTCEEEEEEEECSSSSCSSCEEECCCEEEEEECCC
T ss_pred hhCEEEEEEEEcCcCCcccccEECCCEEEEEecCC
Confidence 999999999964 11 12234577777653
No 61
>1qfo_A Protein (sialoadhesin); immunoglobulin superfamily, carbohydrate binding, immune system; HET: SIA GAL GLC; 1.85A {Mus musculus} SCOP: b.1.1.1 PDB: 1od7_A* 1oda_A* 1od9_A* 1qfp_A 2bve_A* 1url_A*
Probab=99.74 E-value=1.2e-17 Score=105.55 Aligned_cols=98 Identities=12% Similarity=0.063 Sum_probs=68.1
Q ss_pred ecceEEEecCCcEEEEEEEccC------CCCEEEEEecCCC--eEEEecc-eE---EcCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDI------VKVRVSWVRRRDW--HILTSGV-LT---YTNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~------~~~~V~W~k~~~~--~~l~~~~-~~---~~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
.+..+++.+|++|+|+|.++.. ....|.|||+..+ .++.... .. ....+||.+..+...++++|+|++
T Consensus 6 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~~v~W~~~~~g~~~~v~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (119)
T 1qfo_A 6 SPKNVQGLSGSCLLIPCIFSYPADVPVSNGITAIWYYDYSGKRQVVIHSGDPKLVDKRFRGRAELMGNMDHKVCNLLLKD 85 (119)
T ss_dssp CCSEEEEETTSCEEECCEEECCTTSCC--CCEEEEEESTTTTCEEEEESSCGGGSCTTTTTTEEECSCGGGTBCCEEECS
T ss_pred cCCEEEEecCCcEEEEEEeeCCCccCCCCCeEEEEEEcCCCCCCEEEECCCCcccCccceeeEEEeCCCCCCEEEEEEcc
Confidence 4467899999999999999743 2368999999742 2333321 11 112479988754446788999999
Q ss_pred CCCCCCEEEEEeecCCCC----eeEEEEeceecc
Q psy14080 80 LQKRDNGTYECQAQPYTT----TSHSQNAPGLGD 109 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~~----~s~~~~L~V~g~ 109 (113)
++++|+|+|+|++...+. ....+.|.|.++
T Consensus 86 v~~~Dsg~Y~C~v~~~~~~~~~~~~~~~L~V~~~ 119 (119)
T 1qfo_A 86 LKPEDSGTYNFRFEISDSNRWLDVKGTTVTVTTD 119 (119)
T ss_dssp CCGGGCEEEEEEEECC-CCEEECSSCEEEEEEC-
T ss_pred CCcccCceEEEEEEeCCCceecccCCeEEEEecC
Confidence 999999999999976432 113568888764
No 62
>2bk8_A Connectin, M1, titin heart isoform N2-B; IG domain, M-BAND, structural protein, muscle, antibo; 1.69A {Homo sapiens}
Probab=99.74 E-value=4.7e-17 Score=99.08 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=71.9
Q ss_pred eEeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
.+....++++.+|+++.|.|.+.+. +.+.|.|||.. ..+ ..+.|+.+.. .++..+|.|.+++.+|+|.
T Consensus 4 v~~~~~~~~v~~G~~v~l~C~~~g~~p~~~v~W~~~~--~~~-------~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~ 72 (97)
T 2bk8_A 4 VSGQIMHAVGEEGGHVKYVCKIENYDQSTQVTWYFGV--RQL-------ENSEKYEITY--EDGVAILYVKDITKLDDGT 72 (97)
T ss_dssp EECCCCCEEECTTCCEEEEEEEESCCTTCEEEEEETT--EEC-------CSSSSEEEEE--ETTEEEEEECSCCGGGCEE
T ss_pred eeccCcCEEEcCCCcEEEEEEEeccCCCCEEEEEECC--EEC-------cCCCCEEEEE--cCCeEEEEEecCChhhCeE
Confidence 4455667899999999999999986 88899999853 222 2467888753 2457799999999999999
Q ss_pred EEEeec-CCCCeeEEEEeceecc
Q psy14080 88 YECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 88 Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
|+|.+. ..+..+..+.|.|.+.
T Consensus 73 Y~C~a~n~~g~~~~~~~l~V~~~ 95 (97)
T 2bk8_A 73 YRCKVVNDYGEDSSYAELFVKGV 95 (97)
T ss_dssp EEEEEECSSCEEEEEEEEEETTT
T ss_pred EEEEEECCCCeEeEEEEEEEEec
Confidence 999994 5577788899998864
No 63
>1g1c_A Immunoglobulin-like domain I1 from titin; immunoglobulin domain, beta-sandwhich, I-SET, structural protein; 2.10A {Homo sapiens} SCOP: b.1.1.4
Probab=99.74 E-value=5.4e-17 Score=98.76 Aligned_cols=94 Identities=13% Similarity=-0.032 Sum_probs=71.9
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+.. ...++++.+|+++.|.|.+.+.+.+.|.|||.. ..+ ..+.|+.+.. ...+..+|.|.+++.+|
T Consensus 5 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g--~~~-------~~~~~~~~~~-~~~~~~~L~i~~v~~~D 73 (99)
T 1g1c_A 5 APKIFE-RIQSQTVGQGSDAHFRVRVVGKPDPECEWYKNG--VKI-------ERSDRIYWYW-PEDNVCELVIRDVTGED 73 (99)
T ss_dssp EEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEETT--EEC-------CCCSSEEEEE-EETTEEEEEECSCCGGG
T ss_pred CCceEe-cCcceEEcCCCcEEEEEEEEEeCCCEEEEEECC--EEC-------CCCCCEEEEE-cCCCEEEEEECCCCcCC
Confidence 444443 456688999999999999999888999999843 222 2345665542 13457799999999999
Q ss_pred CEEEEEee-cCCCCeeEEEEeceecc
Q psy14080 85 NGTYECQA-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~-~~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+ +..+..+..+.|.|.++
T Consensus 74 ~G~Y~C~a~N~~g~~~~~~~l~V~~~ 99 (99)
T 1g1c_A 74 SASIMVKAINIAGETSSHAFLLVQAK 99 (99)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CEEEEEEEEECCCcEEEEEEEEEecC
Confidence 99999999 55677788899999874
No 64
>2h32_A Immunoglobulin IOTA chain; beta sheets, V and C-type IG folds, immune system; 2.70A {Homo sapiens}
Probab=99.74 E-value=9.5e-18 Score=108.05 Aligned_cols=82 Identities=20% Similarity=0.139 Sum_probs=62.4
Q ss_pred cceEEEecCCcEEEEEEEccC---CCCEEEEEecCC---Ce-EEEe--cceE-Ec--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI---VKVRVSWVRRRD---WH-ILTS--GVLT-YT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~---~~~~V~W~k~~~---~~-~l~~--~~~~-~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.++.. ....|+|||+.. .. ++.. +... .. ..+||.+..+...+.++|+|+++
T Consensus 7 p~~v~v~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 86 (126)
T 2h32_A 7 PPAMSSALGTTIRLTCTLRNDHDIGVYSVYWYQQRPGHPPRFLLRYFSQSDKSQGPQVPPRFSGSKDVARNRGYLSISEL 86 (126)
T ss_dssp CSEEEEETTCCEEEEEEECTTSCGGGCEEEEEEECTTSCCEEEEEEEETTEEEECTTCCTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEECCCCCEEEEEEecCCCccccceEEEEEECCCCCCEEEEEEECCCCEEeCCCCCCCEEEEEeCCCCeEEEEECCC
Confidence 456899999999999999864 346899999974 22 3332 2211 21 25799998666678899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 87 ~~~DsG~Y~C~~~~ 100 (126)
T 2h32_A 87 QPEDEAMYYCAMGA 100 (126)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred ChhHCEEEEEEEEc
Confidence 99999999999954
No 65
>1pko_A Myelin oligodendrocyte glycoprotein; IGV-domain, immune system; 1.45A {Rattus norvegicus} SCOP: b.1.1.1 PDB: 1pkq_E 3csp_A 1py9_A
Probab=99.73 E-value=5.4e-17 Score=104.95 Aligned_cols=100 Identities=12% Similarity=0.073 Sum_probs=69.2
Q ss_pred EeecceEEEecCCcEEEEEEEccCC---CCEEEEEecCCCe-EEEe-cceEE------cCCCCEEEEEe-CCCCcEEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV---KVRVSWVRRRDWH-ILTS-GVLTY------TNDARFQVIHT-DGSDDWNLQI 77 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~---~~~V~W~k~~~~~-~l~~-~~~~~------~~~~R~~~~~~-~~~~~~~L~I 77 (113)
+.....+++.+|++|+|+|.+...+ .+.|.|||+.... ++.. ..... .-.+|+.+..+ ...++++|+|
T Consensus 10 ~~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~v~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~sL~I 89 (139)
T 1pko_A 10 IGPGHPIRALVGDEAELPCRISPGKNATGMEVGWYRSPFSRVVHLYRNGKDQDAEQAPEYRGRTELLKESIGEGKVALRI 89 (139)
T ss_dssp ECCSSCEEEETTSCEEEEEEEESCCCCTTSEEEEEEC--CCEEEEEETTEECGGGSCSTTTTSEEEECTTGGGTEEEEEE
T ss_pred ECCCCCEEEEeCCCEEEeeEccCCCCCCceEEEEEECCCCceEEEEeCCcccccccCcccCCceEEccccccCCeEEEEE
Confidence 3344568999999999999998543 3689999987432 2222 11111 11468887632 1235789999
Q ss_pred ccCCCCCCEEEEEeecCC-CCeeEEEEeceecc
Q psy14080 78 KFLQKRDNGTYECQAQPY-TTTSHSQNAPGLGD 109 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~~-~~~s~~~~L~V~g~ 109 (113)
.+++.+|+|.|+|.+... +..+..+.|.|.+.
T Consensus 90 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~P 122 (139)
T 1pko_A 90 QNVRFSDEGGYTCFFRDHSYQEEAAVELKVEDP 122 (139)
T ss_dssp SSCCGGGCEEEEEEEEETTEEEEEEEEEEEECT
T ss_pred ccCCHHHCEEEEEEEEcCCCceEEEEEEEEecC
Confidence 999999999999999643 45677889998753
No 66
>1neu_A Myelin P0 protein; structural protein, glycoprotein, transmembrane, phosphorylation, immunoglobulin fold, signal; 1.90A {Rattus norvegicus} SCOP: b.1.1.1
Probab=99.73 E-value=2.6e-17 Score=103.92 Aligned_cols=99 Identities=14% Similarity=0.131 Sum_probs=68.8
Q ss_pred eecceEEEecCCcEEEEEEEccC----CCCEEEEEecCCC----e-EEEec-ceEEc-----CCCCEEEEEeCCCCcEEE
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDI----VKVRVSWVRRRDW----H-ILTSG-VLTYT-----NDARFQVIHTDGSDDWNL 75 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~----~~~~V~W~k~~~~----~-~l~~~-~~~~~-----~~~R~~~~~~~~~~~~~L 75 (113)
.....+++.+|++|+|+|.+... ....|.|+|+... . ++... ..... -.+|+.+..+...++++|
T Consensus 4 ~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 83 (124)
T 1neu_A 4 YTDREVYGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPSWKDGSI 83 (124)
T ss_dssp ECCSEEEEETTSCEEECCEEECSSCCCSCCEEEEEEEETTCCCCEEEEEEETTEEEECSSSTTTTCEEECCBGGGTBCCE
T ss_pred ecCCeEEEEeCCeEEEEeEEeCCCCCCCceEEEEEEcCCCCCceEEEEEecCCeeccccCccccCcEEEecCCcCCeEEE
Confidence 34567889999999999999643 4578999998642 1 33221 11111 146888753333467899
Q ss_pred EEccCCCCCCEEEEEeecCCCC---eeEEEEeceecc
Q psy14080 76 QIKFLQKRDNGTYECQAQPYTT---TSHSQNAPGLGD 109 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~~~~~~---~s~~~~L~V~g~ 109 (113)
+|++++.+|+|.|+|.+...+. .+..++|.|...
T Consensus 84 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~v~L~V~~~ 120 (124)
T 1neu_A 84 VIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVFEK 120 (124)
T ss_dssp EECSCCGGGCEEEEEEEEC----CCEEEEEEEEEEC-
T ss_pred EEccCChhhCEEEEEEEEcCCCCcCcEeeEEEEEecC
Confidence 9999999999999999975432 467889999764
No 67
>3noi_A Natural cytotoxicity triggering receptor 3; immune system, innate immunity, immunoglobulin-like I2 type natural killer cell activation; HET: 1PG; 1.84A {Homo sapiens} PDB: 3pv6_B*
Probab=99.73 E-value=4.1e-18 Score=108.35 Aligned_cols=89 Identities=13% Similarity=0.186 Sum_probs=66.4
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCC----CCEEEEEecC--CCeEEEecceEEcCCCCEEEEEeC---CCCcEE
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIV----KVRVSWVRRR--DWHILTSGVLTYTNDARFQVIHTD---GSDDWN 74 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~----~~~V~W~k~~--~~~~l~~~~~~~~~~~R~~~~~~~---~~~~~~ 74 (113)
.++.+....+..+++.+|++|+|+|.++... ...|.|||+. ++..+... ....++||.+..+. ..+.++
T Consensus 5 ~~~~~~v~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~g~~~~~~--~~~~~~R~~~~~~~~~~~~~~~s 82 (120)
T 3noi_A 5 FQGALWVSQPPEIRTLEGSSAFLPCSFNASQGRLAIGSVTWFRDEVVPGKEVRNG--TPEFRGRLAPLASSRFLHDHQAE 82 (120)
T ss_dssp CCCBCCEECCSEEEEETTSCEEECCEECCCTTSCCCEEEEEEESSCSTTCBCCTT--CTTTTTCEECCCHHHHHTTCBCC
T ss_pred EeEEEEEcCCCEEEEEcCCCEEEEeeecCCCCCCceeEEEEEeccCCCCceeccc--ccccCCcEEeecccccccCCcEE
Confidence 3555666667789999999999999998765 4679999987 43332211 11235788875443 567889
Q ss_pred EEEccCCCCCCEEEEEeecC
Q psy14080 75 LQIKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 75 L~I~~v~~~D~G~Y~C~~~~ 94 (113)
|+|++++++|+|+|+|.+..
T Consensus 83 L~I~~v~~~DsG~Y~C~v~~ 102 (120)
T 3noi_A 83 LHIRDVRGHDASIYVCRVEV 102 (120)
T ss_dssp EEESSCCGGGCEEEEEEEEE
T ss_pred EEEecCChhhCEEEEEEEEE
Confidence 99999999999999999964
No 68
>2nw2_A ELS4 TCR alpha chain; T cell receptor, immune system; 1.40A {Homo sapiens} PDB: 2nx5_D 4dzb_A
Probab=99.73 E-value=2.6e-17 Score=113.64 Aligned_cols=99 Identities=14% Similarity=0.053 Sum_probs=72.5
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---e-EEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---H-ILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~-~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
++ ...+++.+|++|+|+|.+++.....|+|||+.++ . +++........++||.+..+..++.++|+|++++.+|+
T Consensus 4 ~Q-p~~~~v~~G~~vtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~~~Ds 82 (200)
T 2nw2_A 4 DQ-PTEMTATEGAIVQINCTYQTSGFNGLFWYQQHAGEAPTFLSYNVLDGLEEKGRFSSFLSRSKGYSYLLLKELQMKDS 82 (200)
T ss_dssp BC-CSEEEEETTCCEEEEEECCCSSCCCEEEEEECTTSCCEEEEEECSSEEEEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EC-CCeEEEccCCCEEEEEEECCCCCceEEEEEeCCCCCcEEEEEEcCCCcccCCceEEEecCCCCEEEEEECccCcccC
Confidence 44 6778999999999999998776678999999742 2 33332211112789999876777889999999999999
Q ss_pred EEEEEeecC---CC--CeeEEEEeceecc
Q psy14080 86 GTYECQAQP---YT--TTSHSQNAPGLGD 109 (113)
Q Consensus 86 G~Y~C~~~~---~~--~~s~~~~L~V~g~ 109 (113)
|+|+|++.. .. .......|.|++.
T Consensus 83 g~Y~C~~~~~~~~~~~~fg~gt~L~V~~~ 111 (200)
T 2nw2_A 83 ASYLCAVQASGGSYIPTFGRGTSLIVHPY 111 (200)
T ss_dssp EEEEEEEC---CCCCCEECCCEEEEEECC
T ss_pred CcEEEEEEcCCcceeeeeCCCEEEEEecC
Confidence 999999964 11 1123457777764
No 69
>1p4b_L Antibody variable light chain; FV antibody, antigen peptide binder, SCFV, picomolar binder, immune system; 2.35A {Mus musculus} SCOP: b.1.1.1 PDB: 1p4i_L
Probab=99.73 E-value=1.6e-17 Score=108.54 Aligned_cols=95 Identities=19% Similarity=0.086 Sum_probs=67.2
Q ss_pred cceEEEecCCcEEEEEEEccCC---CCEEEEEecCC---CeEEEecceEEc--CCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV---KVRVSWVRRRD---WHILTSGVLTYT--NDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~---~~~V~W~k~~~---~~~l~~~~~~~~--~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
.+.+++.+|++|+|+|.++... .+.|+|||+.+ +..|........ ..+||.+.. ..+.++|+|++++++|
T Consensus 12 ~~~v~v~~G~~vtL~C~~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~--~~~~~sL~I~~v~~~D 89 (135)
T 1p4b_L 12 ESALTTSPGETVTLTCRSSTGAVTTSNYASWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL--IGDKAALTITGAQTED 89 (135)
T ss_dssp CSEEEECTTCEEEEEEEETTSSCCGGGCCEEEEEEGGGEEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEEESCCGGG
T ss_pred CCcEEEcCCCCEEEEEEecCCCcCCCCEEEEEEECCCCCCEEEEEeCCccCCCCCCCEEEEc--CCCEEEEEECCCChhH
Confidence 3458999999999999998664 56899999874 233322211121 257999874 3568999999999999
Q ss_pred CEEEEEeecCCCC--eeEEEEeceecc
Q psy14080 85 NGTYECQAQPYTT--TSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~~~--~s~~~~L~V~g~ 109 (113)
+|+|+|++..... ......|.|++.
T Consensus 90 sG~Y~C~~~~~~~~~fg~GT~L~V~~~ 116 (135)
T 1p4b_L 90 EAIYFCALWYSNHWVFGGGTKLTVLGG 116 (135)
T ss_dssp CEEEEEEEECSSCEEECCCEEEEEC--
T ss_pred CEEEEEEEecCCCCEECCCEEEEEEcC
Confidence 9999999965332 234567777654
No 70
>2or8_A Hepatitis A virus cellular receptor 1 homolog; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 2.50A {Mus musculus}
Probab=99.73 E-value=9.2e-18 Score=105.17 Aligned_cols=96 Identities=15% Similarity=0.123 Sum_probs=69.0
Q ss_pred ceEEEecCCcEEEEEEEcc-CCCCEEEEEecCC-----C-eEEEec-c-eEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 14 QISTGFLAVFSYSDKTVRD-IVKVRVSWVRRRD-----W-HILTSG-V-LTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~-~~~~~V~W~k~~~-----~-~~l~~~-~-~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
..+++.+|++|+|+|.+.. .....|.|||+.. . .++..+ . .....++||.+..+...+.++|+|++++.+|
T Consensus 5 ~~v~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~~D 84 (116)
T 2or8_A 5 VEVKGVVGHPVTLPCTYSTYRGITTTCWGRGQCPSSACQNTLIWTNGHRVTYQKSSRYNLKGHISEGDVSLTIENSVESD 84 (116)
T ss_dssp EEEEEETTSCEEECCBCCCTTCCCCEEEEESCCCSSSCTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCGGG
T ss_pred ceEEEEeCCcEEEEEEeeCCCCCcEEEEEEECCCCCCceEEEEEeCCcccCcCCCCeEEEecCCCCCeEEEEECCCCccc
Confidence 4578899999999999975 3456799999862 2 233322 1 1133578998754345677899999999999
Q ss_pred CEEEEEeecCCC-C--eeEEEEeceecc
Q psy14080 85 NGTYECQAQPYT-T--TSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~~-~--~s~~~~L~V~g~ 109 (113)
+|.|+|.+...+ . .+..+.|.|...
T Consensus 85 sG~Y~C~v~~~~~~~~~~~~~~l~V~p~ 112 (116)
T 2or8_A 85 SGLYCCRVEIPGWFNDQKVTFSLQVKPE 112 (116)
T ss_dssp CEEEEEEECCSSTTCCEEEEEEEEEECS
T ss_pred CEEEEEEEEcCCcccccEEEEEEEECCc
Confidence 999999997543 2 366777777653
No 71
>2cqv_A MLCK, myosin light chain kinase, smooth muscle and non- muscle isozymes; IG fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.73 E-value=5.8e-17 Score=101.47 Aligned_cols=94 Identities=12% Similarity=0.121 Sum_probs=73.9
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.+.. ..+.+++.+|++++|.|.+.+.+.+.|.|+|.. .. + ..+.|+.+.. .....+|.|.+++.+
T Consensus 6 ~pp~i~~-~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~~-~~-~-------~~~~~~~~~~--~~~~~~L~I~~v~~~ 73 (114)
T 2cqv_A 6 SGPQIIQ-FPEDQKVRAGESVELFGKVTGTQPITCTWMKFR-KQ-I-------QESEHMKVEN--SENGSKLTILAARQE 73 (114)
T ss_dssp CCCEESC-CCCSEEEETTCCEEEEEEEESSSSCEEEEEESS-SB-C-------CCSSSEEEEE--CSSEEEEEETTCCTT
T ss_pred CCCEEEe-CCCCeEEeCCCeEEEEEEEEcCCCCEEEEEECC-EE-C-------cCCCCEEEEE--cCCEEEEEECCCChh
Confidence 4666654 556789999999999999999988999999853 21 1 2356888763 345779999999999
Q ss_pred CCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
|+|.|+|.+. ..+..+..+.|.|.+.
T Consensus 74 D~G~Y~C~a~N~~g~~~~~~~l~V~~~ 100 (114)
T 2cqv_A 74 HCGCYTLLVENKLGSRQAQVNLTVVDK 100 (114)
T ss_dssp TCEEEEEEEECSSCEEECCEEEEEECS
T ss_pred cCEEEEEEEEECCCcEEEEEEEEEECC
Confidence 9999999994 5567777888988764
No 72
>1oaq_L Light chain; antibody, allergy, IGE, conformational diversity, multispecificity; 1.50A {Rattus rattus} SCOP: b.1.1.1 PDB: 1ocw_L 2bjm_L* 1oau_L* 1oar_L* 1oaz_L 1mfa_L* 1a6v_L* 1oax_L* 1oay_L* 1a6w_L* 1a6u_L 1dl7_L*
Probab=99.73 E-value=1.6e-17 Score=105.63 Aligned_cols=95 Identities=17% Similarity=0.039 Sum_probs=67.5
Q ss_pred ceEEEecCCcEEEEEEEccCC---CCEEEEEecCCC---eEEEecceEEc--CCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIV---KVRVSWVRRRDW---HILTSGVLTYT--NDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~---~~~V~W~k~~~~---~~l~~~~~~~~--~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
..+++.+|++|+|+|.+++.. ...|.|||+..+ ..+........ ..+||.+.. .++.++|+|++++++|+
T Consensus 8 ~~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~~~~~Ds 85 (120)
T 1oaq_L 8 SALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL--IGNKAALTITGAQTEDE 85 (120)
T ss_dssp SEEEECTTCEEEEEEEETTBCCCGGGCCEEEEEETTTEEEEEEETTTEECTTSCTTEEEEE--ETTEEEEEEESCCGGGC
T ss_pred CcEEEcCCCCEEEEEEeCCCccCCCCEEEEEEeCCCCCCeEEEEEcCccCCCCCCceEEec--CCCeEEEEECCCChhhC
Confidence 348999999999999998764 578999998742 22322211111 257999874 35689999999999999
Q ss_pred EEEEEeecCCCC--eeEEEEeceeccc
Q psy14080 86 GTYECQAQPYTT--TSHSQNAPGLGDL 110 (113)
Q Consensus 86 G~Y~C~~~~~~~--~s~~~~L~V~g~~ 110 (113)
|+|+|++..... ......|.|++..
T Consensus 86 G~Y~C~~~~~~~~~fg~gt~L~V~~~~ 112 (120)
T 1oaq_L 86 AIYFCALWYSNHLVFGGGTKLTVLGQP 112 (120)
T ss_dssp EEEEEEEEETTEEEECCCEEEEECC--
T ss_pred eEEEEEEccCCCcEECCCEEEEEcCCC
Confidence 999999964332 2345578887653
No 73
>3eak_A NBBCII10-FGLA; antibody, nanobody, humanization, VHH domain, immune system; 1.95A {Camelus dromedarius} SCOP: b.1.1.1
Probab=99.73 E-value=2.3e-17 Score=108.20 Aligned_cols=100 Identities=13% Similarity=0.062 Sum_probs=67.1
Q ss_pred ceEEEecCCcEEEEEEEccC-----CCCEEEEEecCCC---eEE-Eec--c--eEE--cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 14 QISTGFLAVFSYSDKTVRDI-----VKVRVSWVRRRDW---HIL-TSG--V--LTY--TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~-----~~~~V~W~k~~~~---~~l-~~~--~--~~~--~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
..+++.+|++|+|+|.+++. ....+.||||.++ ..| ... . ... ...+||.+..+...+.++|+|.
T Consensus 8 ~~~~v~~G~~vtL~C~~s~~~~~~~~~~~v~WyrQ~pg~~~~~L~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~ 87 (137)
T 3eak_A 8 GGGLVQPGGSLRLSCAASGGSEYSYSTFSLGWFRQAPGQGLEAVAAIASMGGLTYYADSVKGRFTISRDNSKNTLYLQMN 87 (137)
T ss_dssp CCCEECTTCCEEEEEEEESCTTSCGGGSEEEEEEECTTSCEEEEEEECTTTCCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred CCEEECCCCCEEEEeEecCCccccccCcEEEEEEECCCCCCEEEEEEecCCCceecCCccCCCEEEEecCCCCEEEEEEC
Confidence 35789999999999999764 3468999999742 333 221 1 111 1357999986655678999999
Q ss_pred cCCCCCCEEEEEeecCCC---------C--eeEEEEeceecccccC
Q psy14080 79 FLQKRDNGTYECQAQPYT---------T--TSHSQNAPGLGDLLMH 113 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~---------~--~s~~~~L~V~g~~~~~ 113 (113)
+++++|+|+|+|++.... . .-....|.|.+..+.|
T Consensus 88 ~lq~~Dsg~YyCa~~~~~~~~~~~~~~~~~fG~gt~l~v~~~~~~~ 133 (137)
T 3eak_A 88 SLRAEDTAVYYCAAVRGYFMRLPSSHNFRYWGQGTLVTVSSRGRHH 133 (137)
T ss_dssp SCCGGGCEEEEEEEESSCCSSCCCGGGCSEECCCEEEEEC------
T ss_pred CCCHHHCEEEEEEEEcCCccccccccceeEECCCEEEEEccCCccc
Confidence 999999999999996531 1 1234567777666544
No 74
>1dlf_H Anti-dansyl immunoglobulin IGG2A(S); FV fragment; 1.45A {Mus musculus} SCOP: b.1.1.1 PDB: 2dlf_H 1wz1_H* 3iy5_B 2uud_H*
Probab=99.73 E-value=4.9e-17 Score=104.07 Aligned_cols=96 Identities=16% Similarity=0.140 Sum_probs=67.8
Q ss_pred ceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Ee---c--c-eEEc--CCCCEEEEEeCCCCcEEEEEcc
Q psy14080 14 QISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TS---G--V-LTYT--NDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~---~--~-~~~~--~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
..+++.+|++|+|+|.+++. ....|.|||+.++ ..| .. . . .... ..+||.+..+..++.++|+|++
T Consensus 8 ~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~y~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~ 87 (124)
T 1dlf_H 8 GGGLVQPGGSMKLSCATSGFTFSDAWMDWVRQSPEKGLEWVAEIRNKANNHATYYAESVKGRFTISRDDSKRRVYLQMNT 87 (124)
T ss_dssp CCCEECTTCCEEEEEEEESSCTTTCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEETTTTEEEEEECS
T ss_pred CCEEEcCCCCEEEEeECCCccCCCCeEEEEEECCCCCceEEEEEEeccCCCceeeCcccCCcEEEEEcCCCCEEEEEECC
Confidence 46789999999999999853 3578999999742 222 22 1 1 1222 2579999876667889999999
Q ss_pred CCCCCCEEEEEeecCC---C--CeeEEEEeceecc
Q psy14080 80 LQKRDNGTYECQAQPY---T--TTSHSQNAPGLGD 109 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~---~--~~s~~~~L~V~g~ 109 (113)
++++|+|+|+|++... . ..-....|.|++.
T Consensus 88 ~~~~Dsg~Y~C~~~~~~~~~~~~fg~GT~L~V~~~ 122 (124)
T 1dlf_H 88 LRAEDTGIYYCTGIYYHYPWFAYWGQGTLVTVSAE 122 (124)
T ss_dssp CCGGGCEEEEEEEEBTTBSSCCCCCCCEEEEEC--
T ss_pred CCHHHCEEEEEEEEeCCCcccceECCCEEEEEecC
Confidence 9999999999999642 1 2234456777653
No 75
>2edn_A Myosin-binding protein C, fast-type; beta-sandwich, IG-fold, fast MYBP-C, C-protein, skeletal muscle fast isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.73 E-value=9.7e-18 Score=107.77 Aligned_cols=100 Identities=19% Similarity=0.180 Sum_probs=74.0
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccC---CCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCC----CCcEEEE
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDI---VKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDG----SDDWNLQ 76 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~---~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~----~~~~~L~ 76 (113)
.|..++....+++++.+|++|+|.|.+.+. +.+.|.|||.. ...+.. ....|+.+..... ...++|+
T Consensus 10 ~~~~~f~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~L~ 83 (118)
T 2edn_A 10 EPTGVFLKKPDSVSVETGKDAVVVAKVNGKELPDKPTIKWFKGK-WLELGS-----KSGARFSFKESHNSASNVYTVELH 83 (118)
T ss_dssp CCSSSCSBCCCCCEEETTSCEECCEEEETTTSSSCCCCEEEETT-TCCCCC-----STTSSCEEEEEECSSSCEEEEEEE
T ss_pred CCcceEEECCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCC-EeccCC-----CCccEEEeccccccccccceEEEE
Confidence 456667777899999999999999999864 67899999942 111111 0134555532101 1268999
Q ss_pred EccCCCCCCEEEEEee-cCCCCeeEEEEeceecc
Q psy14080 77 IKFLQKRDNGTYECQA-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 77 I~~v~~~D~G~Y~C~~-~~~~~~s~~~~L~V~g~ 109 (113)
|++++.+|+|.|.|.+ +..+..+..++|.|.+.
T Consensus 84 I~~v~~~D~G~Y~Cevsn~~g~~s~~~~L~V~~~ 117 (118)
T 2edn_A 84 IGKVVLGDRGYYRLEVKAKDTCDSCGFNIDVEAP 117 (118)
T ss_dssp ESSCCTTTCSCEEEEEECSSCEEEEEECCEEECC
T ss_pred EeeCChhhCEEEEEEEEEcCCcEEEEEEEEEEcC
Confidence 9999999999999999 56678899999999863
No 76
>1kxv_C Camelid VHH domain CAB10; beta 8 alpha 8, beta barrel, hydrolase, immune system; 1.60A {Camelus dromedarius} SCOP: b.1.1.1
Probab=99.73 E-value=4.4e-17 Score=103.78 Aligned_cols=82 Identities=18% Similarity=0.182 Sum_probs=61.7
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eecc---eEEc--CCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSGV---LTYT--NDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~~---~~~~--~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.++ ..+ .... .... ..+||.+..+..++.++|+|++++
T Consensus 7 ~~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 86 (121)
T 1kxv_C 7 SGGGTVPAGGSLRLSCAASGNTLCTYDMSWYRRAPGKGRDFVSGIDNDGTTTYVDSVAGRFTISQGNAKNTAYLQMDSLK 86 (121)
T ss_dssp ECCEEECTTCCEEEEEEEESCTTCCEEEEEEEECTTSCEEEEEEECTTCCEEECGGGBTTEEEEECSSTTEEEEEECSCC
T ss_pred CCCEEEcCCCcEEEEEEecCCCcCceEEEEEEeCCCCCCEEEEEEeCCCCeeeCcccCCcEEEEEECCCCEEEEEECCCC
Confidence 346899999999999999854 3578999999742 233 2221 1121 257999987656778999999999
Q ss_pred CCCCEEEEEeecC
Q psy14080 82 KRDNGTYECQAQP 94 (113)
Q Consensus 82 ~~D~G~Y~C~~~~ 94 (113)
++|+|+|+|++..
T Consensus 87 ~~Dsg~Y~C~~~~ 99 (121)
T 1kxv_C 87 PDDTAMYYCKPSL 99 (121)
T ss_dssp GGGCEEEEEEEEE
T ss_pred HHHCEEEEEEEEe
Confidence 9999999999953
No 77
>3k3q_A Llama AA1 VHH domain; llama, VHH, antibody, BONT, cell junction, cell membrane, cytoplasm, disulfide bond, hydrolase; 2.60A {Lama glama} SCOP: b.1.1.0
Probab=99.73 E-value=9.2e-17 Score=106.98 Aligned_cols=100 Identities=14% Similarity=0.121 Sum_probs=69.7
Q ss_pred EeecceEEEecCCcEEEEEEEccCC-------------CCEEEEEecCC---CeEE-Eecc---e-EE--cCCCCEEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV-------------KVRVSWVRRRD---WHIL-TSGV---L-TY--TNDARFQVIH 66 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~-------------~~~V~W~k~~~---~~~l-~~~~---~-~~--~~~~R~~~~~ 66 (113)
++.+. +++.+|++|+|+|.++... ...+.||||.+ +..| .... . .. ...+||.+..
T Consensus 8 ~q~~~-~~v~~G~~vtL~C~~s~~~~~~~~~~~~~~~~~~~v~WyrQ~pg~~p~~L~~~~~~~~~~~~~~~~~~Rfs~s~ 86 (151)
T 3k3q_A 8 VDSGG-GTLQAGKSLRLSCAISGLAFDGGAMGSEHRLTAGAMGWFRQAPGKDREFVAAISPRTDETYYAESLEGRFSVSR 86 (151)
T ss_dssp EEECC-EEEETTCCEEEEEEEESCCCSSTTTCGGGTTSCCEEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTCEEEE
T ss_pred EecCC-EEECCCCCEEEEEEEeCccccccccccccccCCeeEEEEEECCCCCcEEEEEEeCCCCceecCCccCCCEEEEe
Confidence 34443 8999999999999998642 46899999974 2333 2211 1 11 2358999987
Q ss_pred eCCCCcEEEEEccCCCCCCEEEEEeecCCC------------CeeEEEEeceeccc
Q psy14080 67 TDGSDDWNLQIKFLQKRDNGTYECQAQPYT------------TTSHSQNAPGLGDL 110 (113)
Q Consensus 67 ~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~------------~~s~~~~L~V~g~~ 110 (113)
+...+.++|+|++++++|+|+|+|++.... ..-....|.|+++.
T Consensus 87 ~~s~~~~sL~I~~lq~~Dsg~YyCa~~~~~~~~~~~~~~~~~~fG~GT~LtV~~~~ 142 (151)
T 3k3q_A 87 DAAATMVFLQADNVRLDDTASYYCAADEDVTPRVMGVIPHADHWGQGTLVTVSSAA 142 (151)
T ss_dssp CTTSSEEEEEESSCCSTTCEEEEEEEETTSCHHHHHHTTCCSEECCCEEEEEEC--
T ss_pred cCCCCEEEEEECCCccccCEEEEEEEecCCcccccccccccccCCcCEEEEEeccc
Confidence 666688999999999999999999996421 12344567776654
No 78
>3puc_A Titin; I-SET IG-like domain, M-BAND, transferase; 0.96A {Homo sapiens}
Probab=99.73 E-value=8.5e-17 Score=97.74 Aligned_cols=92 Identities=14% Similarity=0.128 Sum_probs=72.3
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+. ....++++.+|+++.|.|.+.+.+.+.|.|+|. +..+ ..+.|+.+.. +.+.++|.|.+++.+|
T Consensus 6 ~P~i~-~~~~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~--g~~~-------~~~~~~~~~~--~~~~~~L~i~~~~~~d 73 (99)
T 3puc_A 6 KPVIV-TGLQDTTVSSDSVAKFAVKATGEPRPTAIWTKD--GKAI-------TQGGKYKLSE--DKGGFFLEIHKTDTSD 73 (99)
T ss_dssp EEEEE-ECCCCEEEESSSCEEEEEEEEEESCCEEEEEET--TEEC-------CSSSSEEEEE--ETTEEEEEECSCCGGG
T ss_pred CCEEE-ecCccEEEeCCCcEEEEEEEEecCCCEEEEEEC--CEEC-------cCCCCEEEEE--eCCEEEEEECCCCccc
Confidence 44443 345678999999999999999988899999984 2222 2457888764 3456799999999999
Q ss_pred CEEEEEee-cCCCCeeEEEEeceec
Q psy14080 85 NGTYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
+|.|+|.+ +..+..+..+.|.|.+
T Consensus 74 ~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (99)
T 3puc_A 74 SGLYTCTVKNSAGSVSSSCKLTIKA 98 (99)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CEEEEEEEEeCCCcEeEEEEEEEEe
Confidence 99999999 4557778888998876
No 79
>2q86_A Valpha14 TCR; INKT cells, TCR, glycolipid recognition, innate immunity, IM system; HET: NAG BMA MAN FUC; 1.85A {Mus musculus} PDB: 3quy_C* 3o9w_C* 3qux_C* 3o8x_C* 3quz_C* 3rtq_C* 3rzc_C* 3ta3_C* 3tvm_C* 3qi9_C* 3ard_C* 3are_C* 3arf_C* 3arg_C* 3he6_C* 3he7_C* 3arb_C* 3scm_C* 3sda_C* 3sdc_C* ...
Probab=99.73 E-value=5.5e-17 Score=114.25 Aligned_cols=101 Identities=10% Similarity=-0.015 Sum_probs=74.4
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---e-EEEecc-eEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---H-ILTSGV-LTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~-~l~~~~-~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.++.+..+++.+|++|+|+|.+++.....|+|||+.++ . +++... .....++||.+..+..++.++|+|++++.+
T Consensus 4 v~Q~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~ 83 (229)
T 2q86_A 4 VEQSPQSLVVRQGENCVLQCNYSVTPDNHLRWYKQDTGKGLVLLTVLVDQKDKTSNGRYSATLDKDAKHSTLHITATLLD 83 (229)
T ss_dssp EEEECSEEEEETTCCEEEEEEECCSCCSCEEEEEECTTCCEEEEEEECSSEEEEEETTEEEEEETTTTEEEEEECSCCGG
T ss_pred eEECCCEEEEecCCCEEEEEEECCCCCcEEEEEEECCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEcccCcc
Confidence 35566778999999999999998776678999999742 2 233221 112236899998767788999999999999
Q ss_pred CCEEEEEeecCCC--CeeEEEEeceecc
Q psy14080 84 DNGTYECQAQPYT--TTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~~~--~~s~~~~L~V~g~ 109 (113)
|+|+|+|++.... .......|.|++.
T Consensus 84 Dsg~Y~C~~~~~~~~~~g~gt~L~V~~~ 111 (229)
T 2q86_A 84 DTATYFCVVGDRGSALFGSGTQLIVIPY 111 (229)
T ss_dssp GCEEEEEEESCGGGCEECCCEEEEEECC
T ss_pred cCccEEEEEEecCcccccCCEEEEEECc
Confidence 9999999996432 1223347777654
No 80
>2bnu_A TCR alpha chain, T-cell receptor alpha chain C region; superagonist peptide T-cell vaccines, transmembrane, immunoglobulin domain; 1.40A {Homo sapiens} PDB: 2bnq_D 2bnr_D 2f54_D 2pyf_A* 2pye_D* 2f53_D 2p5e_D* 2p5w_D* 3mv7_D 3mv8_D 3mv9_D 3utt_D 2cdg_A
Probab=99.73 E-value=3.9e-17 Score=112.61 Aligned_cols=100 Identities=16% Similarity=0.080 Sum_probs=72.9
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---e-EEEecc-eEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---H-ILTSGV-LTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~-~l~~~~-~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++....+++.+|++|+|+|.+++.....|.|||+..+ . +++... .....++||.+..+..++.++|+|++++.+|
T Consensus 4 ~q~p~~v~v~~G~~v~L~C~~s~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~~D 83 (203)
T 2bnu_A 4 TQIPAALSVPEGENLVLNCSFTDSAIYNLQWFRQDPGKGLTSLLLIQSSQREQTSGRLNASLDKSSGRSTLYIAASQPGD 83 (203)
T ss_dssp EEECSEEEEETTCCEEEEEEESCCCEEEEEEEEECTTSCEEEEEEEETTCSEEEETTEEEEEETTTTEEEEEESSCCGGG
T ss_pred EEcCCEEEEeCCCCEEEEEEECCCCcceEEEEEeCCCCCcEEEEEECCCCccccCCCeEEEEcCCCCEEEEEEeeCCccc
Confidence 4556778999999999999998776668999999742 2 333221 1112368999987667788999999999999
Q ss_pred CEEEEEeecCC----C--CeeEEEEeceecc
Q psy14080 85 NGTYECQAQPY----T--TTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~----~--~~s~~~~L~V~g~ 109 (113)
+|+|+|++... . .......|.|++.
T Consensus 84 sg~Y~C~~~~~~~~~~~~~~g~gt~L~V~~~ 114 (203)
T 2bnu_A 84 SATYLCAVRPTSGGSYIPTFGRGTSLIVHPY 114 (203)
T ss_dssp CEEEEEEEEECSSSTTCCEECCCEEEEEECC
T ss_pred CeEEEEEEEcCcCcceeeeeCCCEEEEEeCC
Confidence 99999999642 1 1123457777654
No 81
>1smo_A Triggering receptor expressed on myeloid cells 1; activating receptors, TREM-1, innate immune system receptor, system; HET: TLA; 1.47A {Homo sapiens} SCOP: b.1.1.1
Probab=99.73 E-value=4.1e-17 Score=104.39 Aligned_cols=97 Identities=11% Similarity=-0.033 Sum_probs=68.1
Q ss_pred ecceEEEecCCcEEEEEEEcc--CCCCEEEEEecCC---CeEEEecc--e---EEcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRD--IVKVRVSWVRRRD---WHILTSGV--L---TYTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~--~~~~~V~W~k~~~---~~~l~~~~--~---~~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
....+++.+|++++|+|.++. .....+.||||.+ +..|.... . ....++||.+..+...+.++|+|.+++
T Consensus 5 ~~~~~~~~~G~svtl~C~~s~~~~~~~~~~Wyrq~pg~~~~~l~~~~~~s~~~~~~~~~Rfs~~~~~~~~~~~LtI~~l~ 84 (119)
T 1smo_A 5 TEEKYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIILEDYHDHGLLRVRMVNLQ 84 (119)
T ss_dssp SEEEEECCTTCCEEEEEECCHHHHTTSCEEEEEECTTSCCEEEEECCSSCCSSCCEEETTEEEEEETTTTEEEEEECSCC
T ss_pred CCCcEEEcCCCCEEEEEEEeCCcCCCcEEEEEEeCCCCCCEEEEEEeCCCccCCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 344578899999999999973 2345689999974 33332211 0 011247999987677889999999999
Q ss_pred CCCCEEEEEeecCCC--C--eeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPYT--T--TSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~--~--~s~~~~L~V~g 108 (113)
++|+|+|+|++.... . ....++|.|.-
T Consensus 85 ~~Dsg~Y~C~~~~~~~~~~~~~~~v~L~V~~ 115 (119)
T 1smo_A 85 VEDSGLYQCVIYQPPKEPHMLFDRIRLVVTK 115 (119)
T ss_dssp GGGCEEEEEEECCTTSCCEECSCEEEEEC--
T ss_pred HHHCEEEEEEEEcCCCCcceEEEEEEEEEEC
Confidence 999999999996533 1 12467887753
No 82
>3khq_A B-cell antigen receptor complex-associated protei chain; CD79B, CD79A, IG-beta, BCR, IG domain, V-SET, immunoglobulin protein binding; HET: FLC GSH; 1.70A {Mus musculus} PDB: 3kho_A*
Probab=99.72 E-value=2.4e-17 Score=107.18 Aligned_cols=91 Identities=19% Similarity=0.239 Sum_probs=68.6
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
+++....+++.+|++|+|+|.+.+. +.|.|||+..+ ..+. ..++||.+.. +++.++|+|.+++.+|+
T Consensus 20 v~q~p~~~~v~~G~~v~L~C~~~~~--~~v~W~r~~~g~~~~~l~------~~~~r~~~~~--~~~~~~L~I~~~~~~Ds 89 (133)
T 3khq_A 20 IWQHPRFAAKKRSSMVKFHCYTNHS--GALTWFRKRGSQQPQELV------SEEGRIVQTQ--NGSVYTLTIQNIQYEDN 89 (133)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSS--SCEEEEEECTTSCCEECC------CTTTTEEEEE--ETTEEEEEECSCCGGGC
T ss_pred eEEcCceEEEeCCCeEEEEEEeCCC--CEEEEEEeCCCCCCEEEE------EeCCCEEEEc--CCCEEEEEECCCChHHC
Confidence 4556778899999999999999976 78999998632 2221 1468999874 34678999999999999
Q ss_pred EEEEEeecCCC-----CeeEEEEeceecc
Q psy14080 86 GTYECQAQPYT-----TTSHSQNAPGLGD 109 (113)
Q Consensus 86 G~Y~C~~~~~~-----~~s~~~~L~V~g~ 109 (113)
|+|+|++.... .....+.|.|++.
T Consensus 90 G~Y~C~a~n~~g~~~~~~g~gt~L~V~~~ 118 (133)
T 3khq_A 90 GIYFCKQKCDSANHNVTDSCGTELLVLGF 118 (133)
T ss_dssp EEEEEEESSCC-------CCCEEEEEC--
T ss_pred EEEEEEEEeCCCCcceeECCCEEEEEEec
Confidence 99999995432 2355678888874
No 83
>3dmm_C T-cell surface glycoprotein CD8 alpha chain; T cell CO-receptor CD8AB MHC complex, immune response, membrane, MHC I, phosphoprotein, transmembrane; 2.60A {Mus musculus}
Probab=99.72 E-value=4.5e-17 Score=110.22 Aligned_cols=87 Identities=15% Similarity=0.199 Sum_probs=64.5
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC------eEE-Eecce---E-Ec----CCCCEEEEEeCCCCcE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW------HIL-TSGVL---T-YT----NDARFQVIHTDGSDDW 73 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~------~~l-~~~~~---~-~~----~~~R~~~~~~~~~~~~ 73 (113)
+++....+++.+|++|+|.|.++......|+||||..+ .+| +.... . +. ..+||.+..+ ..+.+
T Consensus 12 v~Q~P~~v~v~~G~sVtL~C~~s~~~~~~v~WyrQ~pg~~~~~p~~Li~~~~~~~~~~y~~~~~~~~Rfs~s~~-~~~~~ 90 (166)
T 3dmm_C 12 LRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRD-TNNKY 90 (166)
T ss_dssp EEEECSCBCCCTTCCEEEEEEEESSSCCEEEEEEEETTCSCCSCEEEEEEESSSCCEEECGGGSSCCSEEEECS-TTTEE
T ss_pred EEEeCCeEEEcCCCCEEEEEEEeCCCCceEEEEEECCCCCCCCcEEEEEEeCCCCceeeccccccccceEEEcC-CCCEE
Confidence 34556678899999999999998666779999999743 233 32211 1 11 3689998753 34459
Q ss_pred EEEEccCCCCCCEEEEEeecCCC
Q psy14080 74 NLQIKFLQKRDNGTYECQAQPYT 96 (113)
Q Consensus 74 ~L~I~~v~~~D~G~Y~C~~~~~~ 96 (113)
+|+|++++++|+|+|+|++...+
T Consensus 91 sL~I~~vq~eDsG~YyCa~~~~~ 113 (166)
T 3dmm_C 91 VLTLNKFSKENEGYYFCSVISNS 113 (166)
T ss_dssp EEEESSCCTTTCEEEEEEEESSS
T ss_pred EEEECCCChhhCEEEEEEECCCC
Confidence 99999999999999999997544
No 84
>3b9v_A Heavy chain variable domain; antibody engineering, phage display, immune system; 1.80A {Homo sapiens} PDB: 1fvc_B 3p9w_B 1fgv_H 2vh5_H*
Probab=99.72 E-value=5.8e-17 Score=102.86 Aligned_cols=82 Identities=16% Similarity=0.133 Sum_probs=61.4
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eE-EEec---ce-EEc--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HI-LTSG---VL-TYT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~-l~~~---~~-~~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.++ .. +... .. ... ..+||.+..+..++.++|+|+++
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (120)
T 3b9v_A 7 SGGGLVQPGGSLRLSCAASGFNIKDTYIGWVRRAPGKGEEWVASIYPTNGYTRYADSVKGRFTISADTSKNTAYLQMNSL 86 (120)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEeCCccEEEEEEeeCccccccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCeEEEEEcCCCCEEEEEECCC
Confidence 456889999999999999854 3578999999742 22 2221 11 111 24799998655567899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 87 ~~~Dsg~Y~C~~~~ 100 (120)
T 3b9v_A 87 RAEDTAVYYCARWG 100 (120)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred CHHHCEEEEEEEEc
Confidence 99999999999954
No 85
>1kgc_D T-cell receptor alpha chain; LC13 clone, immune system; 1.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1mi5_D 3kpr_D 3kps_D 3o6f_C 3t0e_C 3pqy_D 2esv_D 3dxa_D 3dx9_A
Probab=99.72 E-value=6.6e-17 Score=111.87 Aligned_cols=98 Identities=10% Similarity=-0.031 Sum_probs=71.4
Q ss_pred EeecceEEEecCCcEEEEEEEcc-CCCCEEEEEecCCC---eEE-EecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRD-IVKVRVSWVRRRDW---HIL-TSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~-~~~~~V~W~k~~~~---~~l-~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++ ...+++.+|++|+|+|.+++ .....|.|||+..+ ..+ +..... ..++||.+..+..++.++|+|++++.+|
T Consensus 4 ~Q-p~~~~v~~G~~v~L~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~-~~~~Rf~~~~~~~~~~~sL~I~~~~~~D 81 (206)
T 1kgc_D 4 TQ-PNSMESNEEEPVHLPCNHSTISGTDYIHWYRQLPSQGPEYVIHGLTSN-VNNRMASLAIAEDRKSSTLILHRATLRD 81 (206)
T ss_dssp EC-CSEEEEETTSCEEEEEEESCCCTTCCEEEEEECTTSCCEEEEEESSSS-EECSSEEEEECTTSSEEEEEESSCCGGG
T ss_pred EC-CCeEEEcCCCCEEEEEEEcCCCCCccEEEEEECCCCCcEEEEEECCCC-ccCCCEEEEEcCCCCEEEEEECCCCccc
Confidence 44 67789999999999999986 44468999999742 333 322111 1268999987677788999999999999
Q ss_pred CEEEEEeecCC-----C--CeeEEEEeceecc
Q psy14080 85 NGTYECQAQPY-----T--TTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~-----~--~~s~~~~L~V~g~ 109 (113)
+|+|+|++... . .......|.|++.
T Consensus 82 sg~Y~C~~~~~~~~~~~~~~~g~gt~L~V~~~ 113 (206)
T 1kgc_D 82 AAVYYCILPLAGGTSYGKLTFGQGTILTVHPN 113 (206)
T ss_dssp CEEEEEECCCCSTTCCCCCCCCCCEEEEEECC
T ss_pred CccEEEEEecccCCCcccceECCCEEEEEeCC
Confidence 99999999642 1 2223457777654
No 86
>1nez_G T-cell surface glycoprotein CD8 alpha chain; immune system; HET: NAG; 2.10A {Synthetic} SCOP: b.1.1.1 PDB: 1bqh_G* 3b9k_A* 2atp_A* 2arj_R
Probab=99.72 E-value=2.8e-17 Score=106.43 Aligned_cols=85 Identities=15% Similarity=0.140 Sum_probs=63.3
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC------eEEEec-c---eE--Ec---CCCCEEE-EEeCCCCc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW------HILTSG-V---LT--YT---NDARFQV-IHTDGSDD 72 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~------~~l~~~-~---~~--~~---~~~R~~~-~~~~~~~~ 72 (113)
.++....+++.+|++|+|.|.+++.....|+||||.++ ..|... . .. +. .++||.+ .. +++.
T Consensus 7 v~Q~p~~~~v~~G~~vtL~C~~s~~~~~~v~WyrQ~~g~~l~~p~~l~~~~~~~~~~~~~~~~~~~~rfs~~~~--~~~~ 84 (128)
T 1nez_G 7 LRIFPKKMDAELGQKVDLVCEVLGSVSQGCSWLFQNSSSKLPQPTFVVYMASSHNKITWDEKLNSSKLFSAMRD--TNNK 84 (128)
T ss_dssp EEEESSCEEECTTCCEEEEEEEESCCSSCEEEEEEESSCSSCCCEEEEEECSSSCCEEECTTTTGGGTEEEEEE--TTTE
T ss_pred eEECCCeEEEcCCCCEEEEEEeCccCCCcEEEEEeCCCCCCCCcEEEEEEecccCCceeeccccCCCcEEEEeC--CCCE
Confidence 45667778999999999999998765578999999742 333321 1 11 11 1479998 53 4457
Q ss_pred EEEEEccCCCCCCEEEEEeecCC
Q psy14080 73 WNLQIKFLQKRDNGTYECQAQPY 95 (113)
Q Consensus 73 ~~L~I~~v~~~D~G~Y~C~~~~~ 95 (113)
++|+|++++++|+|+|+|++...
T Consensus 85 ~~L~I~~~~~~Dsg~YyCa~~~~ 107 (128)
T 1nez_G 85 YVLTLNKFSKENEGYYFCSVISN 107 (128)
T ss_dssp EEEEESSCCGGGCEEEEEEEEET
T ss_pred EEEEECCCCHHHCEEEEEEEcCC
Confidence 99999999999999999999643
No 87
>2yc1_A Single chain antibody fragment 9004G; immune system-toxin complex, scorpion toxin; 1.90A {Homo sapiens} PDB: 2ybr_A 1dql_H 3cfi_C
Probab=99.72 E-value=6.3e-17 Score=102.17 Aligned_cols=82 Identities=16% Similarity=0.202 Sum_probs=61.8
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEE-Eecc----eEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHIL-TSGV----LTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l-~~~~----~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++.. ...|.|||+.+ +..+ .... ... ...+||.+..+..++.++|+|+++
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (117)
T 2yc1_A 7 SGGGLVQPGGSLRLSCTGSGFTFDNYAMHWLRQVPGEGLEWVSGISRSSGDIDYADSVKGRFTISRDDAKKTLSLQMNSL 86 (117)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCeEEEEEEecCcccCCCeEEEEEECCCCCcEEEEEEccCCCceeeCcccCCeEEEEEeCCCCEEEEEECCC
Confidence 4468899999999999998542 56899999974 2222 2211 111 125799998766678899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 87 ~~~Dsg~Y~C~~~~ 100 (117)
T 2yc1_A 87 RAEDTAVYYCARGG 100 (117)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CHHHCEEEEEEEEe
Confidence 99999999999964
No 88
>2d7t_H Anti polyhydroxybutyrate antibody FV, heavy chain; plastic, immune system; 1.70A {Homo sapiens}
Probab=99.72 E-value=3.8e-17 Score=107.05 Aligned_cols=97 Identities=9% Similarity=0.078 Sum_probs=68.5
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eec---ce-EE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSG---VL-TY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~---~~-~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.+ +..| ... .. .+ ...+||.+..+..++.++|+|+++
T Consensus 7 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~ 86 (139)
T 2d7t_H 7 SGAEVKKPGASVKVSCKASGYTFTGNYMHWVRQAPGQGLEYMGWINPKSGDTNYAQKFQGRVTMTRDTSISTVYMEVRRL 86 (139)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEEeCCcccCCEEEEEEECCCCCCEEEEEEEcCCCceeeCcccCCeEEEEEeCCCCEEEEEECcC
Confidence 445789999999999999853 346899999974 2333 221 11 11 125799998655567899999999
Q ss_pred CCCCCEEEEEeecCCC--CeeEEEEeceecc
Q psy14080 81 QKRDNGTYECQAQPYT--TTSHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~--~~s~~~~L~V~g~ 109 (113)
+++|+|+|+|++.... .......|.|++.
T Consensus 87 ~~~Dsg~Y~C~~~~~~~~~fg~GT~L~V~~~ 117 (139)
T 2d7t_H 87 RSDDTAVYYCATGWWGMDVWGQGTLVTVSSA 117 (139)
T ss_dssp CGGGCEEEEEEECSSSCCEECCCEEEEECC-
T ss_pred CHHHCEEEEEEEeeCCcCEECCCEEEEEecc
Confidence 9999999999996532 2234557777654
No 89
>1fo0_B Protein (BM3.3 T cell receptor beta-chain); class I MHC, H-2KB, TCR-PMHC complex, immune system; 2.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1nam_B* 2ol3_B* 1kb5_B 1kj2_B*
Probab=99.72 E-value=2.6e-17 Score=103.66 Aligned_cols=82 Identities=11% Similarity=0.035 Sum_probs=60.8
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEE-Eecc--eEE---cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HIL-TSGV--LTY---TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l-~~~~--~~~---~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
++.+..+++.+|++|+|+|.+++.+.+.|.|||+.++ ..| .... ... ..++||.+..+. +. +|+|+++
T Consensus 5 ~q~p~~~~v~~G~~vtL~C~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~--~~-~L~I~~~ 81 (112)
T 1fo0_B 5 EQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRVT--DT-ELRLQVA 81 (112)
T ss_dssp EEECSEEECCTTCCEEEEEEESCTTCCEEEEEEECTTCCEEEEEECCSTTCEEEEEETTEEEEEEEEE--TT-EEEEEEE
T ss_pred EeCCCeEEEecCCcEEEEEEeCCCCCceEEEEEECCCCCCEEEEEEeCCCceecCccccCCEEEEcCC--CC-eEEEcCC
Confidence 4556678999999999999998766789999999742 233 2211 111 113799887532 34 9999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 82 ~~~Dsg~Y~C~~~~ 95 (112)
T 1fo0_B 82 NMSQGRTLYCTCSA 95 (112)
T ss_dssp SCCSCEEEEEEEES
T ss_pred CHhHCEEEEEEEEc
Confidence 99999999999964
No 90
>2jju_A Signal regulatory protein beta-1; immunoglobulin domain, immunoglobulin superfamily, immune system, transmembrane, paired receptor; 1.19A {Homo sapiens} PDB: 2jjv_A 2uv3_A* 2jjt_A* 2jjs_A* 2jjw_A
Probab=99.72 E-value=1.6e-17 Score=106.70 Aligned_cols=102 Identities=10% Similarity=0.068 Sum_probs=67.0
Q ss_pred eeEeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCCC--eEEEecceEEcCCCCEEEEEe---CCCCcEEEEEccCC
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDW--HILTSGVLTYTNDARFQVIHT---DGSDDWNLQIKFLQ 81 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~--~~l~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~ 81 (113)
..++....+++.+|++|+|+|.+++. +.+.|.|||+.+. .++..... ...+||....+ .....++|+|.+++
T Consensus 5 ~v~q~p~~~~v~~G~~vtL~C~~~~~~~~~~v~W~r~~~~~~~li~~~~~--~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (127)
T 2jju_A 5 QVIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKE--GHFPRVTTVSELTKRNNLDFSISISNIT 82 (127)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEECSSTTCEEEEESSS--SCCTTEEEC-------CCBCCEEECSCC
T ss_pred EEEeeCCeEEEeCCCCEEEEEEEeCCCCCCEEEEEecCCCCcEEEEECCC--CccCcEEeeEeeeecCCCEEEEEECCCC
Confidence 34555677899999999999999865 4578999998632 23332111 12357775321 23457899999999
Q ss_pred CCCCEEEEEeecCCC-C------eeEEEEeceecccc
Q psy14080 82 KRDNGTYECQAQPYT-T------TSHSQNAPGLGDLL 111 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~-~------~s~~~~L~V~g~~~ 111 (113)
++|+|+|+|++.... . ......|.|++...
T Consensus 83 ~~DsG~Y~C~~~~~~~~~~~~~~fg~GT~L~V~~~~~ 119 (127)
T 2jju_A 83 PADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAKPS 119 (127)
T ss_dssp GGGCEEEEEEEEECCSSSCEEEEECCCEEEEEEC---
T ss_pred HHHCEEEEEEEEcCCCCccceEEeCCCeEEEEeecCC
Confidence 999999999995421 1 12346788887653
No 91
>3k1k_C Enhancer; nanobody, antibody-complex, chromophore, luminescence, photoprotein, luminescent protein/immune system complex; HET: GYS; 2.15A {Lama pacos} SCOP: b.1.1.1 PDB: 3miq_E* 3ogo_E*
Probab=99.72 E-value=9.4e-17 Score=103.25 Aligned_cols=85 Identities=16% Similarity=0.226 Sum_probs=63.8
Q ss_pred eEeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eec---ce-EE--cCCCCEEEEEeCCCCcEEEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSG---VL-TY--TNDARFQVIHTDGSDDWNLQ 76 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~---~~-~~--~~~~R~~~~~~~~~~~~~L~ 76 (113)
+++.+. +++.+|++|+|+|.+++. ....+.||||.+ +..| ... .. .. ...+||.+..+..++.++|+
T Consensus 6 l~q~~~-~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~ 84 (123)
T 3k1k_C 6 LVESGG-ALVQPGGSLRLSCAASGFPVNRYSMRWYRQAPGKEREWVAGMSSAGDRSSYEDSVKGRFTISRDDARNTVYLQ 84 (123)
T ss_dssp EEEECC-CEECTTCCEEEEEEEESSCTTTSCEEEEEECSSSCCEEEEEECSSSSCEEECTTTTTTEEEEEETTTTEEEEE
T ss_pred EEecCC-EEECCCCCEEEEEEeeCCcccccEEEEEEECCCCCCEEEEEEEcCCCceeeCccccccEEEEEeCCCCEEEEE
Confidence 445554 689999999999999864 356899999974 2333 321 11 11 12579999876667889999
Q ss_pred EccCCCCCCEEEEEeecC
Q psy14080 77 IKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 77 I~~v~~~D~G~Y~C~~~~ 94 (113)
|.+++++|+|+|+|++.+
T Consensus 85 I~~~~~~Dsg~Y~Ca~~~ 102 (123)
T 3k1k_C 85 MNSLKPEDTAVYYCNVNV 102 (123)
T ss_dssp ECSCCGGGCEEEEEEEES
T ss_pred ECCCChhhCEEEEEEEec
Confidence 999999999999999975
No 92
>2dav_A SLOW MYBP-C, myosin-binding protein C, SLOW-type; IG domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.72 E-value=6.4e-17 Score=105.03 Aligned_cols=100 Identities=18% Similarity=0.158 Sum_probs=74.0
Q ss_pred cCCceeeEeecceEEEecCCcEEEEEEEccC---CCCEEEEEecCCCeEEEecceEEcCCCCEEEEEe--C--CCCcEEE
Q psy14080 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDI---VKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHT--D--GSDDWNL 75 (113)
Q Consensus 3 ~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~---~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~--~--~~~~~~L 75 (113)
+.|..++....+++++.+|++|+|.|.+.+. +.+.|.|||.. ...+.. ....|+.+... . ....++|
T Consensus 4 ~~~~~~F~~~P~~v~V~eG~~v~L~C~v~g~~~~p~P~V~W~Kgk-~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~L 77 (126)
T 2dav_A 4 GSSGILFIEKPQGGTVKVGEDITFIAKVKAEDLLRKPTIKWFKGK-WMDLAS-----KAGKHLQLKETFERHSRVYTFEM 77 (126)
T ss_dssp CCSSCSCCSCCCCCEEETTCCEEEEEEEECCCSSSCCEEEEEESS-SCCHHH-----HTTSSEEEEEEEETTTTEEEEEE
T ss_pred CCcccEEEEcCCCeEEeCCCCEEEEEEEeccCCCCCCcEEEeeCc-CcccCC-----CCCceEEEccccccccccceEEE
Confidence 4566777788899999999999999999864 68899999942 111100 01345554311 0 1125899
Q ss_pred EEccCCCCCCEEEEEee-cCCCCeeEEEEeceec
Q psy14080 76 QIKFLQKRDNGTYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
+|++++.+|+|.|+|.+ +..+..+..++|.|+.
T Consensus 78 ~I~~v~~~DaG~Y~Cevsn~~g~~~~~~~L~V~~ 111 (126)
T 2dav_A 78 QIIKAKDNFAGNYRCEVTYKDKFDSCSFDLEVHE 111 (126)
T ss_dssp EECSCCTTSCEEEEEEEECSSCEEEECCEEEEEC
T ss_pred EEccCCcccCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 99999999999999999 4567788999999987
No 93
>2otu_A FV light chain variable domain; antibody FV polyglutamine complex, immune system; 1.68A {Mus musculus} PDB: 2otw_A 2gsg_A
Probab=99.72 E-value=5.5e-17 Score=102.40 Aligned_cols=82 Identities=16% Similarity=0.166 Sum_probs=62.0
Q ss_pred EeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCC---Ce-EEEecc---eEEc--CCCCEEEEEeCCCCcEEEEEcc
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRD---WH-ILTSGV---LTYT--NDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~---~~-~l~~~~---~~~~--~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
++ +..+++.+|++|+|+|.++.. +...|.|||+.+ +. ++.... .... ..+||.+.. .++.++|+|++
T Consensus 6 ~q-p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~ 82 (115)
T 2otu_A 6 TQ-SSSASFSLGASAKLTCTLSSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS--SGADRYLSISN 82 (115)
T ss_dssp EE-CCCEECCTTCCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECTTCCTTEEEEE--ETTEEEEEESS
T ss_pred Ec-CCCEEECCCCCEEEEEEecCCCCCeEEEEEEeCCCCCceEEEEEecCCceecCcccCCCEEEEc--cCCEEEEEECC
Confidence 44 677899999999999999875 567899999863 22 333221 1222 157999874 45689999999
Q ss_pred CCCCCCEEEEEeecC
Q psy14080 80 LQKRDNGTYECQAQP 94 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~ 94 (113)
++++|+|+|+|++..
T Consensus 83 ~~~~Dsg~Y~C~~~~ 97 (115)
T 2otu_A 83 IQPEDEAIYICGVGD 97 (115)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CChhHCEEEEEEEec
Confidence 999999999999954
No 94
>2or7_A T-cell immunoglobulin and mucin domain- containing protein 2; beta barrel, immunoglobulin fold, IGV domain, TIM, immune system; 1.50A {Mus musculus}
Probab=99.72 E-value=1.6e-17 Score=104.60 Aligned_cols=97 Identities=12% Similarity=0.022 Sum_probs=69.3
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC------CeEEEecc-e-EEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD------WHILTSGV-L-TYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~------~~~l~~~~-~-~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
...+++.+|++|+|+|.++.. ....|.|||+.. ..++..+. . ....++||.+..+...++++|+|++++.
T Consensus 4 p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~~~~~~~~~~~~~~i~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 83 (115)
T 2or7_A 4 HTAVQGLAGHPVTLPCIYSTHLGGIVPMCWGLGECRHSYCIRSLIWTNGYTVTHQRNSRYQLKGNISEGNVSLTIENTVV 83 (115)
T ss_dssp --CEEEETTSCEEECCBCCHHHHCSCCEEEEESCHHHHTTTTEEEEECSSSEEEESSTTEECCSCGGGTBCCEEESSCCG
T ss_pred ccEEEEEcCCCEEEEEEeecCCCCCEEEEEECCCCCcCCCceEEEEeCCeEcccccCccEEEecCccCCeEEEEEccCCH
Confidence 345788999999999999753 346899999851 33443322 1 2335689987644455788999999999
Q ss_pred CCCEEEEEeecCCC-CeeEEEEeceecc
Q psy14080 83 RDNGTYECQAQPYT-TTSHSQNAPGLGD 109 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~-~~s~~~~L~V~g~ 109 (113)
+|+|+|+|.+...+ .....+.|.|...
T Consensus 84 ~DsG~Y~C~v~~~~~~~~~~v~L~V~~~ 111 (115)
T 2or7_A 84 GDGGPYCCVVEIPGAFHFVDYMLEVKPE 111 (115)
T ss_dssp GGCEEEEEEECCTTSCEEEEEEEEEESC
T ss_pred HHCEEEEEEEECCCceeEEEEEEEEcCC
Confidence 99999999997543 3367778887654
No 95
>1n4x_H Immunoglobulin heavy chain variable region; immune system; 1.70A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy4_B
Probab=99.72 E-value=6.9e-17 Score=102.52 Aligned_cols=83 Identities=16% Similarity=0.121 Sum_probs=61.7
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---e-EEEec---ce-EEc--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---H-ILTSG---VL-TYT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~-~l~~~---~~-~~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++.. ...|.|||+.++ . ++... .. ... ..+||.+..+..++.++|+|+++
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (120)
T 1n4x_H 7 SGPELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNL 86 (120)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCeEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 4558999999999999998532 468999999742 2 22221 11 111 24799988655567899999999
Q ss_pred CCCCCEEEEEeecCC
Q psy14080 81 QKRDNGTYECQAQPY 95 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~ 95 (113)
+++|+|+|+|++...
T Consensus 87 ~~~DsG~Y~C~~~~~ 101 (120)
T 1n4x_H 87 KNEDTATYFCVRDRH 101 (120)
T ss_dssp CGGGCEEEEEEEESS
T ss_pred CHHHCEEEEEEEEcc
Confidence 999999999999653
No 96
>3tpk_A Immunoglobulin heavy chain antibody variable DOMA; immunoglobulin heavy chain domains, VHH, complementarity DET regions, CDR, oligomer-specific; 1.30A {Camelidae} PDB: 3ln9_A* 1zv5_A
Probab=99.72 E-value=8.9e-17 Score=105.07 Aligned_cols=101 Identities=19% Similarity=0.203 Sum_probs=69.5
Q ss_pred eEeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Ee--cc-eE-E--cCCCCEEEEEeCCCCcEEEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TS--GV-LT-Y--TNDARFQVIHTDGSDDWNLQ 76 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~--~~-~~-~--~~~~R~~~~~~~~~~~~~L~ 76 (113)
+++.+. +++.+|++|+|+|.++.. ....|.||||.+ +..| .. .. .. . ...+||.+..+...+.++|+
T Consensus 8 l~q~~~-~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~ 86 (136)
T 3tpk_A 8 LVESGG-GSVQPGGSLRLSCTASGYTFSQEFVIWFRQAPGKEREIVSGISLRKGWTYYADSVKGRFTISQDNAKNTVYLQ 86 (136)
T ss_dssp EEEECC-EEECTTCCEEEEEEEEESGGGCCEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEE
T ss_pred EEeeCC-EEEccCCCEEEEEEEcccccCCcEEEEEEECCCCCcEEEEEEECCCCcEEcCcccCCCEEEEEcCCCCEEEEE
Confidence 344443 789999999999999754 356899999974 2333 22 11 11 1 23589999876667789999
Q ss_pred EccCCCCCCEEEEEeecCCC-------CeeEEEEeceeccc
Q psy14080 77 IKFLQKRDNGTYECQAQPYT-------TTSHSQNAPGLGDL 110 (113)
Q Consensus 77 I~~v~~~D~G~Y~C~~~~~~-------~~s~~~~L~V~g~~ 110 (113)
|++++++|+|+|+|++.... ..-....|.|+++.
T Consensus 87 I~~~~~~Dsg~Y~C~~~~~~~~~~~~~~fG~GT~L~V~~~~ 127 (136)
T 3tpk_A 87 MNNLKPEDTAMYYCAAAPTATHALYFDYWGQGTQVTVSSAS 127 (136)
T ss_dssp ECSCCGGGCEEEEEEEESCSSCGGGCBCCCSCEEEEEC---
T ss_pred ECCCChhhCEEEEEEEEeCCCCcccccEECCCEEEEEEcCC
Confidence 99999999999999996421 22344567776654
No 97
>3bdb_A Novel immune-type receptor 11; immunoglobulin variable domain-like beta-sandwich, stalk region, immune system; 2.80A {Ictalurus punctatus}
Probab=99.72 E-value=1.4e-17 Score=108.70 Aligned_cols=98 Identities=14% Similarity=0.126 Sum_probs=72.4
Q ss_pred eecceEEEecCCcEEEEEEEc-cCCCCEEEEEecCCC---eEE-Ee---cc-eEEc--C-CCCEEEEEeCCCCcEEEEEc
Q psy14080 11 AFGQISTGFLAVFSYSDKTVR-DIVKVRVSWVRRRDW---HIL-TS---GV-LTYT--N-DARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~-~~~~~~V~W~k~~~~---~~l-~~---~~-~~~~--~-~~R~~~~~~~~~~~~~L~I~ 78 (113)
+....+++.+|++|+|+|.++ +.....|.|||+..+ ..+ .. +. ..+. . .+||.+.. +++.++|+|+
T Consensus 4 q~p~~v~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~Rf~~~~--~~~~~~L~I~ 81 (137)
T 3bdb_A 4 KELHVKTVKRGENVTMECSMSKVTNKNNLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTV--NDQKFDLNII 81 (137)
T ss_dssp CBCEECCCCTTCEECCCCBCTTCCCGGGBEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEE--SSSBEEEEEE
T ss_pred CCCCeEEEcCCCCEEEEeecCCCcCcceEEEEEECCCCCCEEEEEEEcCCCcceecCcccCCcEEEEe--cCCEEEEEEC
Confidence 344567889999999999998 666678999999742 233 22 11 1121 1 58999874 4678999999
Q ss_pred cCCCCCCEEEEEeecCCC--CeeEEEEeceeccc
Q psy14080 79 FLQKRDNGTYECQAQPYT--TTSHSQNAPGLGDL 110 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~--~~s~~~~L~V~g~~ 110 (113)
+++++|+|+|+|++.... .......|.|++..
T Consensus 82 ~~~~~Dsg~Y~C~~~~~~~~~fg~GT~L~V~~~~ 115 (137)
T 3bdb_A 82 GAREDDGGEYFCGEVEGIIIKFTSGTRLQFEGSN 115 (137)
T ss_dssp SCCSTTCEEEEEEEECSSCEEEEEEEEECCCCCC
T ss_pred CCCHHHCEEEEEEEccCCeEEECCCEEEEEECCC
Confidence 999999999999996543 34567789998765
No 98
>2p45_B Antibody CAB-RN05; seMet phasing, camelid single-domain antibody, VHH, RNAse A, yeast surface display, hydrolase/immune system complex; 1.10A {Camelus dromedarius} PDB: 2p46_B 2p47_B 2p48_B 2p44_B 2p49_B 2p42_B 2p43_B 1bzq_K 3qsk_B 2p4a_B 1op9_A 1sjx_A 3qxt_A* 3qxu_A 3eba_A
Probab=99.71 E-value=9.1e-17 Score=102.47 Aligned_cols=81 Identities=16% Similarity=0.175 Sum_probs=61.0
Q ss_pred ceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eecc----eEEc--CCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSGV----LTYT--NDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~~----~~~~--~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
..+++.+|++|+|+|.+++. ....|.|||+.+ +..+ .... .... ..+||.+..+..++.++|+|++++
T Consensus 10 ~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 89 (123)
T 2p45_B 10 GGGLVQAGGSLRLSCAASGYAYTYIYMGWFRQAPGKEREGVAAMDSGGGGTLYADSVKGRMTISRDKGKNTVYLQMDSLK 89 (123)
T ss_dssp CCEEEETTCCEEEEEEEESCSSCCSEEEEEEECTTSCCEEEEEEETTSCSCEECTTTBTTEEEECCTTSSEEEEEESSCC
T ss_pred CCEEEeCCCCEEEEEEecCccCcCcEEEEEEECCCCCcEEEEEEecCCCceEeCcccCCeEEEEEeCCCCEEEEEECCCC
Confidence 45789999999999999853 357899999973 2232 2211 1111 247999986555678999999999
Q ss_pred CCCCEEEEEeecC
Q psy14080 82 KRDNGTYECQAQP 94 (113)
Q Consensus 82 ~~D~G~Y~C~~~~ 94 (113)
++|+|+|+|++..
T Consensus 90 ~~Dsg~Y~C~~~~ 102 (123)
T 2p45_B 90 PEDTATYYCAAGG 102 (123)
T ss_dssp GGGCEEEEEEESS
T ss_pred HHHCEEEEEEEEe
Confidence 9999999999965
No 99
>1mqk_H Antibody 7E2 FV fragment, heavy chain; membrane protein, cytochrome C oxidase, high- resolution structure, immune system; 1.28A {Mus musculus} SCOP: b.1.1.1 PDB: 1ar1_C 3ehb_C* 3hb3_C* 1qle_H* 2otu_B 2gsg_B 2otw_B 1qfw_I* 3ab0_B 1i8k_B 1i8i_B 1vhp_A 1bfv_H* 1cfv_H* 2bfv_H* 1dsf_H
Probab=99.71 E-value=3.3e-17 Score=105.35 Aligned_cols=97 Identities=15% Similarity=0.163 Sum_probs=68.5
Q ss_pred ceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eecc---e-EE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSGV---L-TY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~~---~-~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
..+++.+|++|+|+|.+++. ....|.|||+.++ ..+ .... . .. ...+||.+..+..++.++|+|++++
T Consensus 8 ~~~~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 87 (127)
T 1mqk_H 8 GGDLVQPGGSLKLSCAASGFTFSSYTMSWVRQTPEKRLEWVASINNGGGRTYYPDTVKGRFTISRDNAKNTLYLQMSSLK 87 (127)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCTTTBTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCEEEcCCCCEEEEEEeCCCccCCcEEEEEEECCCCCCEEEEEEecCCCcEEcCcccCCCEEEEEeCCCCEEEEEECCCC
Confidence 46789999999999999853 2468999999742 223 2211 1 11 1247999986555678999999999
Q ss_pred CCCCEEEEEeecCC--CC--eeEEEEeceeccc
Q psy14080 82 KRDNGTYECQAQPY--TT--TSHSQNAPGLGDL 110 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~--~~--~s~~~~L~V~g~~ 110 (113)
++|+|+|+|++... .. .-....|.|++..
T Consensus 88 ~~Dsg~Y~C~~~~~~~~~~~fg~gT~L~V~~~~ 120 (127)
T 1mqk_H 88 SEDTAMYYCVRHEYYYAMDYWGQGTTVTVSSAW 120 (127)
T ss_dssp GGGCEEEEEEEEETTTEEEEECCCEEEEECSSC
T ss_pred HHHCEEEEEEEecCCcCcceECCCEEEEEeCCc
Confidence 99999999999643 11 1234577776654
No 100
>2oyp_A Hepatitis A virus cellular receptor 2; TIM-3, T-cell immunoglobulin mucin, signaling protein; 1.95A {Mus musculus} PDB: 3kaa_A*
Probab=99.71 E-value=3.1e-17 Score=101.27 Aligned_cols=94 Identities=19% Similarity=0.134 Sum_probs=65.6
Q ss_pred ceEEEecCCcEEEEEEEccCCC---CEEEEEecCCC------eEEEecce--EEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVK---VRVSWVRRRDW------HILTSGVL--TYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~---~~V~W~k~~~~------~~l~~~~~--~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
..+++.+|++|+|+|.+...+. ..|.|||+..+ .++..+.. .....+||.+..+...++++|+|++++.
T Consensus 2 ~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~g~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 81 (109)
T 2oyp_A 2 DGYKVEVGKNAYLPCSYTLPTSGTLVPMCWGKGFCPWSQCTNELLRTDERNVTYQKSSRYQLKGDLNKGDVSLIIKNVTL 81 (109)
T ss_dssp EEEEECTTSCEEECCBCCCCTTCCCCCEEEESSSCCSSSCSSEEEEECSSSEEEESCTTEEECSCGGGTBCCEEECSCCG
T ss_pred CCEEEEcCCCEEEEEEeECCCCCCeEEEEEEecCCCCCCceeEEEEcCCcCccccccceEEEccCccCCcEeEEEccCCC
Confidence 3578899999999999976532 45999998632 23322211 1234679887643345678999999999
Q ss_pred CCCEEEEEeecCC-CCeeEEEEecee
Q psy14080 83 RDNGTYECQAQPY-TTTSHSQNAPGL 107 (113)
Q Consensus 83 ~D~G~Y~C~~~~~-~~~s~~~~L~V~ 107 (113)
+|+|.|+|.+... ...+..+.|.|.
T Consensus 82 ~D~G~Y~C~v~~~~~~~~~~~~l~V~ 107 (109)
T 2oyp_A 82 DDHGTYCCRIQFPGLMNDKKLELKLD 107 (109)
T ss_dssp GGCEEEEEEECCSSTTCCEEEEEEEE
T ss_pred hhCeEEEEEEEcCCcccceEEEEEEE
Confidence 9999999999653 334455666654
No 101
>2qhl_A Novel immune-type receptor 10; immunoglobulin variable domain-like beta-sandwich, immune system; 1.56A {Ictalurus punctatus} PDB: 3b5t_A 2qjd_A 2qte_A 2qqq_A
Probab=99.71 E-value=2.2e-17 Score=103.62 Aligned_cols=82 Identities=16% Similarity=0.156 Sum_probs=61.4
Q ss_pred ecceEEEecCCcEEEEEEEc-cCCCCEEEEEecCCC---eEEE-e---cce-EEc--C-CCCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVR-DIVKVRVSWVRRRDW---HILT-S---GVL-TYT--N-DARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~-~~~~~~V~W~k~~~~---~~l~-~---~~~-~~~--~-~~R~~~~~~~~~~~~~L~I~~ 79 (113)
.+..+++.+|++|+|+|.++ +.+.+.|.|||+.++ ..+. . +.. .+. . .+||.+.. +++.++|+|++
T Consensus 5 ~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~R~~~~~--~~~~~~L~I~~ 82 (111)
T 2qhl_A 5 ELHVKTVKRGENVTMECSMSKVKDKDKLAWYRQSFGKVPQYFVRYYSSNSGYKFAEGFKDSRFSMTV--NDQKFDLNIIG 82 (111)
T ss_dssp BCEEEECCTTCCEEECCBCTTCSCGGGEEEEEECTTBCCEEEEEECSSSSCEEECTTCCCTTEEEEE--SSSBEEEEESS
T ss_pred CCceEEEeCCCCEEEEEEccCCcccceEEEEEecCCCCCEEEEEEeccCCccccccCCCCCcEEEEE--cCCeEEEEECC
Confidence 34567889999999999998 766678999998742 3332 1 111 111 1 68999874 46789999999
Q ss_pred CCCCCCEEEEEeecCC
Q psy14080 80 LQKRDNGTYECQAQPY 95 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~ 95 (113)
++++|+|+|+|++...
T Consensus 83 ~~~~DsG~Y~C~~~~~ 98 (111)
T 2qhl_A 83 TREDDGGEYFCGEVEG 98 (111)
T ss_dssp CCGGGCEEEEEEEEET
T ss_pred CChhHCEEEEEEEccC
Confidence 9999999999999643
No 102
>2ptt_A CD48 antigen; CD244, CD48, NK cell receptor, X-RAY, immune system; 1.63A {Mus musculus} PDB: 2ptv_A
Probab=99.71 E-value=4.5e-17 Score=101.61 Aligned_cols=94 Identities=14% Similarity=0.109 Sum_probs=67.3
Q ss_pred ecceEEEecCCcEEEEEEE-ccCCCCEEEEEecCCCeEEEe--cce--EEcC--CCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 12 FGQISTGFLAVFSYSDKTV-RDIVKVRVSWVRRRDWHILTS--GVL--TYTN--DARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v-~~~~~~~V~W~k~~~~~~l~~--~~~--~~~~--~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
....+++.+|++|+|+|.+ .+.+.+.|.|||..+..++.. +.. .... .+||.+. .++++|+|++++.+|
T Consensus 9 ~~~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~i~~~~~~~~~~~~~~~~~~R~~~~----~~~~sL~I~~v~~~D 84 (110)
T 2ptt_A 9 SIPDINAYTGSNVTLKIHKDPLGPYRRITWLHTKNQKILEYNYNSTKTIFESEFKGRVYLE----ENNGALHISNVRKED 84 (110)
T ss_dssp CCCSEEEETTSCEEECSCSSCCCSCSEEEEEESTTBEEEEEETTSCEEECSSTTTTTEEEC----TTTCCEEESSCCGGG
T ss_pred CCCCEEEecCCcEEEeCCccCCCCcCEEEEEecCCccEEEEECCCCceeeccccCCcEEEe----CCCccEEECCCCccc
Confidence 3455889999999999998 555667999999323323322 111 1111 2588864 267899999999999
Q ss_pred CEEEEEeecCCCCeeEEEEeceecc
Q psy14080 85 NGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+......+..++|.|...
T Consensus 85 sG~Y~C~v~~~~~~~~~~~L~V~dp 109 (110)
T 2ptt_A 85 KGTYYMRVLRETENELKITLEVFDP 109 (110)
T ss_dssp CEEEEEEEESSSBCCEEEEEEEECC
T ss_pred CeEEEEEEEcCCCcEEEEEEEEEcc
Confidence 9999999976555566889988753
No 103
>1j05_H T84.66 antibody, anti-CEA MAB T84.66, heavy chain; immunoglobulin, immune system; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1dvf_D 1mvu_B 1ap2_B 2ap2_B
Probab=99.71 E-value=9.7e-17 Score=102.07 Aligned_cols=82 Identities=15% Similarity=0.104 Sum_probs=61.0
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eE-EEec---ce-EE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HI-LTSG---VL-TY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~-l~~~---~~-~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++.. ...|.|||+.++ .. +... .. .. ...+||.+..+..++.++|+|+++
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (121)
T 1j05_H 7 SGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYLQLTSL 86 (121)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEeCCCcEEEEEEecCcccCCcEEEEEEECCCCCcEEEEEEecCCCceeeCcccCCcEEEEEcCCCCEEEEEECCC
Confidence 4567899999999999998542 568999999742 22 2221 11 11 124799988655567899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 87 ~~~Dsg~Y~C~~~~ 100 (121)
T 1j05_H 87 TSEDTAVYYCAPFG 100 (121)
T ss_dssp CGGGCEEEEEEEEB
T ss_pred CHHHCEEEEEEEEc
Confidence 99999999999954
No 104
>1i3u_A Antibody VHH LAMA domain; VHH fragment, immune system; HET: RR1; 1.95A {Lama glama} SCOP: b.1.1.1 PDB: 1i3v_A
Probab=99.71 E-value=7.2e-17 Score=103.66 Aligned_cols=83 Identities=19% Similarity=0.210 Sum_probs=61.8
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEE-Ee--------cce-EEc--CCCCEEEEEeCCCCcEEE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHIL-TS--------GVL-TYT--NDARFQVIHTDGSDDWNL 75 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l-~~--------~~~-~~~--~~~R~~~~~~~~~~~~~L 75 (113)
+..+++.+|++|+|+|.+++.. ...|.|||+.+ +..| .. +.. ... ..+||.+..+..++.++|
T Consensus 7 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L 86 (127)
T 1i3u_A 7 SGGGLVQAGDSLKLSCEASGDSIGTYVIGWFRQAPGKERIYLATIGRNLVGPSDFYTRYADSVKGRFAVSRDNAKNTVNL 86 (127)
T ss_dssp ESCEECCTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEEEEESSSSCEEEEECTTTBTTEEEEEEGGGTEEEE
T ss_pred CCCEEEeCCCcEEEEEEecCCCcCCcEEEEEEECCCCCcEEEEEEEeccccCCCcceeeCcccCCeEEEEEcCCCCEEEE
Confidence 4468899999999999998542 57899999974 2332 22 111 111 247999986555678999
Q ss_pred EEccCCCCCCEEEEEeecCC
Q psy14080 76 QIKFLQKRDNGTYECQAQPY 95 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~~~~ 95 (113)
+|++++++|+|+|+|++...
T Consensus 87 ~I~~~~~~Dsg~Y~C~~~~~ 106 (127)
T 1i3u_A 87 QMNSLKPEDTAVYYCAAKTT 106 (127)
T ss_dssp EECSCCGGGCEEEEEEEESC
T ss_pred EECCCChhhCEEEEEEEEcC
Confidence 99999999999999999653
No 105
>1kxt_B Immunoglobulin VHH fragment; alpha 8 beta 8, beta barrel, hydrolase, immune system; 2.00A {Camelus dromedarius} SCOP: b.1.1.1
Probab=99.71 E-value=7.7e-17 Score=103.81 Aligned_cols=82 Identities=16% Similarity=0.189 Sum_probs=60.9
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eecc---eEEc--CCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSGV---LTYT--NDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~~---~~~~--~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.++ ..| .... .... ..+||.+..+..++.++|+|++++
T Consensus 7 p~~~~~~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~ 86 (127)
T 1kxt_B 7 SGGGSVQAGGSLRLSCAASGYTFSSYPMGWYRQAPGKECELSARIFSDGSANYADSVKGRFTISRDNAANTAYLQMDSLK 86 (127)
T ss_dssp ECCEECCTTCCEEEEEEEC--CCSSSCEEEEEECTTSCEEEEEEECTTSCEEECTTTTTTEEEEECSSSSEEEEEECSCC
T ss_pred CCCEEEeCCCCEEEEeEecCCCccceEEEEEEECCCCCcEEEEEEecCCCeeeCcccCCeEEEEEeCCCCEEEEEECcCC
Confidence 445789999999999999853 3568999999742 223 2221 1111 257999987656788999999999
Q ss_pred CCCCEEEEEeecC
Q psy14080 82 KRDNGTYECQAQP 94 (113)
Q Consensus 82 ~~D~G~Y~C~~~~ 94 (113)
++|+|+|+|++..
T Consensus 87 ~~Dsg~Y~C~~~~ 99 (127)
T 1kxt_B 87 PEDTAVYYCAAGP 99 (127)
T ss_dssp GGGCEEEEEEECS
T ss_pred HHHCEEEEEEEEc
Confidence 9999999999965
No 106
>1waa_A Titin; metal binding protein, calmodulin-binding, cytoskeleton, immunoglobulin domain, muscle protein, phosphorylation, repeat; 1.80A {Homo sapiens} PDB: 1waa_E 1waa_F 1tit_A 1tiu_A 2rq8_A
Probab=99.71 E-value=2e-16 Score=96.91 Aligned_cols=84 Identities=14% Similarity=0.043 Sum_probs=64.7
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
....+++++.+|++|+|.|.+++. .+.|.|||. +..+ ..++||.+.. +++..+|.|.+++.+|+|.|+
T Consensus 9 ~~~~~~~~v~~G~~v~l~C~v~~~-~~~v~W~k~--g~~i-------~~~~~~~i~~--~g~~~~L~I~~v~~~D~G~Y~ 76 (93)
T 1waa_A 9 EKPLYGVEVFVGETAHFEIELSEP-DVHGQWKLK--GQPL-------AASPDCEIIE--DGKKHILILHNCQLGMTGEVS 76 (93)
T ss_dssp EECCCCEEEETTSCEEEEEEESSS-SCCCEEEET--TEEC-------CCBTTEEEEE--ETTEEEEEECSCCGGGCEEEE
T ss_pred eccCcceEEeCCCCEEEEEEECCC-CCeEEEEEC--CEEC-------cCCCCEEEEE--ECCEEEEEECCCChhhCEEEE
Confidence 444567899999999999999864 478999984 3333 2356888764 345679999999999999999
Q ss_pred EeecCCCCeeEEEEeceec
Q psy14080 90 CQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 90 C~~~~~~~~s~~~~L~V~g 108 (113)
|.+.. ....+.|.|.+
T Consensus 77 C~a~n---~~~sa~L~V~~ 92 (93)
T 1waa_A 77 FQAAN---TKSAANLKVKE 92 (93)
T ss_dssp EEETT---EEEEEEEEEEC
T ss_pred EEECC---CcEEEEEEEEc
Confidence 99854 34567888875
No 107
>2lu7_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.71 E-value=5.5e-17 Score=97.98 Aligned_cols=80 Identities=15% Similarity=0.062 Sum_probs=63.0
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeec
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQ 93 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 93 (113)
.++.+.+|+++.|.|.+++ +.+.|.|||. +..| ..++|+.+.. +++..+|.|.+++.+|+|.|.|.+.
T Consensus 4 t~v~~~~G~~v~l~C~vs~-p~p~v~W~k~--g~~l-------~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~ 71 (84)
T 2lu7_A 4 TRVRSTPGGDLELVVHLSG-PGGPVRWYKD--GERL-------ASQGRVQLEQ--AGARQVLRVQGARSGDAGEYLCDAP 71 (84)
T ss_dssp CCEEECTTSCEEEECCCSC-CSTTCEEEET--TEEC-------CCCSSEEEEE--CSSCEEEEESSCSSTTCEEEEEECT
T ss_pred eEEEEecCCCEEEEEEECC-CCcEEEEEEC--CEEc-------cccccEEEee--cCCeEEEEecCCCCcccEEEEEEEC
Confidence 4688999999999999977 7788999983 3333 2467888763 3466799999999999999999874
Q ss_pred CCCCeeEEEEeceec
Q psy14080 94 PYTTTSHSQNAPGLG 108 (113)
Q Consensus 94 ~~~~~s~~~~L~V~g 108 (113)
. .+..+.|.|+.
T Consensus 72 n---~~~~a~l~V~e 83 (84)
T 2lu7_A 72 Q---DSRIFLVSVEE 83 (84)
T ss_dssp T---TCEEEEEEECC
T ss_pred C---EEEEEEEEEEC
Confidence 3 35567888864
No 108
>2wzp_D Camelid VHH5; baseplate, viral protein; 2.60A {Lama glama} PDB: 2bse_D
Probab=99.71 E-value=7.6e-17 Score=102.83 Aligned_cols=82 Identities=18% Similarity=0.206 Sum_probs=61.4
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeE-EEec---ce-EE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHI-LTSG---VL-TY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~-l~~~---~~-~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.+ +.. +... .. .. ...+||.+..+..++.++|+|+++
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (123)
T 2wzp_D 7 SGGGLVQAGGSLRLSCTASRRTGSNWCMGWFRQLAGKEPELVVALNFDYDMTYYADSVKGRFTVSRDSGKNTVYLQMNSL 86 (123)
T ss_dssp EECEEEETTCCEEEEEEESSCCSSSEEEEEEECCSSSSCEEEEEEETTTTEEEECGGGTTTEEEEEETTEEEEEEEECSC
T ss_pred CCCEEEcCCCcEEEEEEecCCCccCcEEEEEEECCCCCCEEEEEEEcCCCceecCcccCCCEEEEEeCCCCEEEEEECCC
Confidence 446889999999999999853 357899999873 222 2221 11 11 125799998665567899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 87 ~~~Dsg~Y~C~~~~ 100 (123)
T 2wzp_D 87 KPEDTAIYYCAARS 100 (123)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CHHHCEEEEEEEec
Confidence 99999999999954
No 109
>2ak4_D SB27 T cell receptor alpha chain; bulged epitopes, PMHC/TCR complex, immune system; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kxf_D 3nfj_I 3ffc_D
Probab=99.71 E-value=8e-17 Score=111.91 Aligned_cols=101 Identities=10% Similarity=0.057 Sum_probs=72.4
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCC-EEEEEecCCC---e-EEEecc-eE-EcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKV-RVSWVRRRDW---H-ILTSGV-LT-YTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~-~V~W~k~~~~---~-~l~~~~-~~-~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
.++....+++.+|++|+|+|.+++.... .|.|||+..+ . +++... .. ...++||.+..+..++.++|+|++++
T Consensus 6 v~Q~p~~v~v~~G~~vtL~C~~s~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~Rf~~~~~~~~~~~~L~I~~~~ 85 (211)
T 2ak4_D 6 VTQAQTEISVVEKEDVTLDCVYETRDTTYYLFWYKQPPSGELVFLIRRNSFDEQNEISGRYSWNFQKSTSSFNFTITASQ 85 (211)
T ss_dssp EECCCCEEEEETTCCEEECCEEECSCSSCEEEEEEECTTCCCEEEEEEETTSCSEEEETTEEEEEETTTTEEEEEESSCC
T ss_pred eEEeCCEEEEecCCCEEEEEEecCCcCceeEEEEEECCCCccEEEEEECCCcCccCcCCCEEEEEcCCCCEEEEEECccc
Confidence 3455667899999999999999865444 8999999742 2 333221 11 12368999987677888999999999
Q ss_pred CCCCEEEEEeecCC---C--CeeEEEEeceecc
Q psy14080 82 KRDNGTYECQAQPY---T--TTSHSQNAPGLGD 109 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~---~--~~s~~~~L~V~g~ 109 (113)
.+|+|+|+|++... . .......|.|++.
T Consensus 86 ~~Dsg~Y~C~~~~~~~~~~~~~g~gt~L~V~~~ 118 (211)
T 2ak4_D 86 VVDSAVYFCALSGFYNTDKLIFGTGTRLQVFPN 118 (211)
T ss_dssp GGGCEEEEEEEECSBTTSCCEECCCEEEEEECC
T ss_pred cccCceEEEEEEcCCCcceeeECCCEEEEEeCc
Confidence 99999999999642 1 1223356777754
No 110
>2yuz_A Myosin-binding protein C, SLOW-type; immunoglobulin domain, SLOW-type myosin-binding protein C, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.70 E-value=8.1e-17 Score=99.69 Aligned_cols=88 Identities=13% Similarity=0.099 Sum_probs=69.1
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
.+....+++++.+|+++.|.|.+ .+.+.|.|||. +..+ ..++|+.+.. ++...+|.|.+++.+|+|.
T Consensus 9 ~~~~~~~~~~v~~G~~v~l~C~v--~p~p~v~W~k~--g~~l-------~~~~r~~i~~--~~~~~~L~I~~v~~~D~G~ 75 (100)
T 2yuz_A 9 KILTPLTDQTVNLGKEICLKCEI--SENIPGKWTKN--GLPV-------QESDRLKVVQ--KGRIHKLVIANALTEDEGD 75 (100)
T ss_dssp CCSBCCCCEEEETTSCCCEEEEC--SSCCCEEEEET--TEEC-------CCCSSEEEEE--CSSEEEEEESSCCGGGCSE
T ss_pred EEeccCCceEEcCCCCEEEEEEe--CCCCeEEEEEC--CEEC-------CCCCcEEEEE--eCCEEEEEECCCChhhCEE
Confidence 33445567899999999999999 67789999984 3333 2467888764 3456799999999999999
Q ss_pred EEEeecCCCCeeEEEEeceecc
Q psy14080 88 YECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 88 Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
|+|.+... ..+..+.|.|.+.
T Consensus 76 Y~C~a~N~-~~~~~a~L~V~~~ 96 (100)
T 2yuz_A 76 YVFAPDAY-NVTLPAKVHVISG 96 (100)
T ss_dssp EEEEESSS-CCCEEEEEEEECC
T ss_pred EEEEEcCC-CeeEEEEEEEeCC
Confidence 99999665 5677889988764
No 111
>1xiw_D Immunoglobulin heavy chain variable region; CD3-epsilon, CD3-delta, UCHT1-SCFV, immunoglobulin fold, antibody-antigen complex; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 3iy3_B
Probab=99.70 E-value=1e-16 Score=102.16 Aligned_cols=82 Identities=11% Similarity=0.087 Sum_probs=61.3
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---e-EEEe---cce-EEc--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---H-ILTS---GVL-TYT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~-~l~~---~~~-~~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.++ . ++.. +.. ... ..+||.+..+..++.++|+|+++
T Consensus 7 p~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (122)
T 1xiw_D 7 SGPELVKPGASMKISCKASGYSFTGYTMNWVKQSHGKNLEWMGLINPYKGVSTYNQKFKDKATLTVDKSSSTAYMELLSL 86 (122)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGEEEEEEEEETTTEEEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEeCCCcEEEEEEeeCcccCCCEEEEEEECCCCCcEEEEEEeccCCceeeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 445789999999999999853 3468999999742 2 2222 111 121 24799998665567899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 87 ~~~Dsg~Y~C~~~~ 100 (122)
T 1xiw_D 87 TSEDSAVYYCARSG 100 (122)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CHHHCEEEEEEEec
Confidence 99999999999964
No 112
>3kg5_A B-cell antigen receptor complex-associated protei chain; CD79B, IG-beta, BCR, immunoglobulin domain, protein binding; 3.20A {Homo sapiens}
Probab=99.70 E-value=1.3e-16 Score=104.22 Aligned_cols=92 Identities=15% Similarity=0.094 Sum_probs=69.4
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEec-CC---CeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRR-RD---WHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~-~~---~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
++.+..+++.+|++|+|+|.++.. .+.|+|||+ .+ ...+.. .++||.+.. +++.++|+|.+++++|+
T Consensus 22 ~Q~p~~~~v~~G~svtL~C~~s~~-~~~v~Wyrq~~~g~~~~~l~~------~~~rf~~~~--~~~~~~L~I~~~~~~Ds 92 (134)
T 3kg5_A 22 WQSPRFIARKRGFTVKMHCYMNSA-SGNVSWLWKQEMDENPQQLKL------EKGRMEESQ--NESLATLTIQGIRFEDN 92 (134)
T ss_dssp EEECSEEEEETTCCEEEEEECCCT-TCCCEEEEESSSSSCCEECCC------CTTTEEEEE--CSSEEEEEECSCCTTTC
T ss_pred EEeCCEEEEeCCCCEEEEEEECCC-CceEEEEEECCCCCCcEEEEE------ECCeEEEEc--cCCEEEEEECCCCcCcC
Confidence 455667899999999999999865 578999999 53 233321 367999873 45789999999999999
Q ss_pred EEEEEeecCC--C--CeeEEEEeceeccc
Q psy14080 86 GTYECQAQPY--T--TTSHSQNAPGLGDL 110 (113)
Q Consensus 86 G~Y~C~~~~~--~--~~s~~~~L~V~g~~ 110 (113)
|+|+|++... . .......|.|+|..
T Consensus 93 g~Y~C~~~~~~~~~~~fg~GT~L~V~~~p 121 (134)
T 3kg5_A 93 GIYFCQQKCNNTSEVYQGCGTELRVMGFS 121 (134)
T ss_dssp EEEEEEEECTTTCCEEECCCEEEEEECC-
T ss_pred EEEEEEEEcCCCCceEECCCEEEEEecCC
Confidence 9999999653 2 23455678887754
No 113
>2hp4_A T-cell surface glycoprotein CD8 alpha chain; CO-receptor, soluble protein, KD, protein engineering, immunotherapy, immune-suppressor, immune system; 2.10A {Homo sapiens} PDB: 1akj_D 1cd8_A 3qzw_G 2q3a_A
Probab=99.70 E-value=4.3e-17 Score=103.15 Aligned_cols=84 Identities=17% Similarity=0.073 Sum_probs=61.4
Q ss_pred EeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCCC-----eEE-Eecce--EEcC---CCCEEEEEeCCCCcEEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDW-----HIL-TSGVL--TYTN---DARFQVIHTDGSDDWNLQI 77 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~-----~~l-~~~~~--~~~~---~~R~~~~~~~~~~~~~L~I 77 (113)
++.+..+++.+|++|+|+|.++.. +...|.|||+.++ ..| ..... .... .+||.+.. .++.++|+|
T Consensus 4 ~q~p~~v~v~~G~~vtL~C~~~~~~~~~~v~Wyrq~~g~~~~~~~l~~~~~~~~~~~~~~~~~rf~~~~--~~~~~~L~I 81 (114)
T 2hp4_A 4 RVSPLDRTWNLGETVELKCQVLLSNPTSGASWLFQPRGAAASPTFLLYLNQNKPKAAEGLDTQRFSGKR--LGDTFVLTL 81 (114)
T ss_dssp EEECCSCCCCTTCCEEEEEEECCSSCCSCEEEEEEESSSSCCCEEEEEESSSSCEECTTCCTTTEEEEE--ETTEEEEEE
T ss_pred EeCCCEEEEcCCCCEEEEEEeecCCCCceEEEEEECCCCCCCcEEEEEEcCCCccccCCCCcccEEEEe--cCCEEEEEE
Confidence 455667889999999999999854 3578999998632 222 22211 1111 57998764 356799999
Q ss_pred ccCCCCCCEEEEEeecCC
Q psy14080 78 KFLQKRDNGTYECQAQPY 95 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~~ 95 (113)
++++++|+|+|+|++...
T Consensus 82 ~~~~~~Dsg~Y~C~~~~~ 99 (114)
T 2hp4_A 82 SDFRRENEGYYFCSALSN 99 (114)
T ss_dssp SSCCGGGCEEEEEEEEET
T ss_pred CCCCHHHCEEEEEEEecC
Confidence 999999999999999653
No 114
>4gos_A V-SET domain-containing T-cell activation inhibit; immunoglobulin domain, glycoprotein, disulfide bond, immunit adaptive immunity; HET: NAG BMA MAN; 1.59A {Homo sapiens}
Probab=99.70 E-value=9.7e-17 Score=103.16 Aligned_cols=97 Identities=15% Similarity=0.099 Sum_probs=66.2
Q ss_pred ecceEEEecCCcEEEEEEEccCC---CCEEEEEecCCC-e-EEEe-cceEEc-----CCCCEEEEEe-CCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIV---KVRVSWVRRRDW-H-ILTS-GVLTYT-----NDARFQVIHT-DGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~---~~~V~W~k~~~~-~-~l~~-~~~~~~-----~~~R~~~~~~-~~~~~~~L~I~~ 79 (113)
....+.+.+|++|+|+|.++... ...|.|||.... . .+.. +..... -.+|+.+..+ ...++++|+|++
T Consensus 11 ~~~~v~g~vG~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~R~~~~~~~~~~g~~sL~I~~ 90 (125)
T 4gos_A 11 TTVASAGNIGEDGILSCTFEPDIKLSDIVIQWLKEGVLGLVHEFKEGKDELSEQDEMFRGRTAVFADQVIVGNASLRLKN 90 (125)
T ss_dssp EEECEEEETTSCEEEEEEECCCSCGGGCEEEEEETTCSSBSEEEETTEECCTTBCGGGTTCEEECTTTGGGTBCCEEESS
T ss_pred cCceEEEeCCCCEEEEEEEcCCcccCcEEEEEEEeccCceEEEEEeecccccccCccccceEEEecCCccCCeEEEEECC
Confidence 34457888999999999997433 347999997642 2 2222 211111 1357776532 124578999999
Q ss_pred CCCCCCEEEEEeecC-CCCeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQP-YTTTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~-~~~~s~~~~L~V~g 108 (113)
|+++|+|.|+|.+.+ ....+..+.|+|=.
T Consensus 91 v~~~D~G~Y~C~v~~~~g~~~~~v~LkVG~ 120 (125)
T 4gos_A 91 VQLTDAGTYKCYIITSKGKGNANLEYKTGH 120 (125)
T ss_dssp CCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred CChHHCEEEEEEEEeCCCeEEEEEEEEECC
Confidence 999999999999954 45667888888743
No 115
>3cx5_J Heavy chain (VH) of FV-fragment; complex III, electron transfer complex, cytochrome BC1 complex, mitochondrialtransmembrane complex; HET: M3L SUC 6PH UMQ HEM SMA 8PE 9PE CN5 7PH CN3; 1.90A {Mus musculus} SCOP: b.1.1.1 PDB: 1kb9_J* 1kyo_J* 1p84_J* 2ibz_X* 1ezv_X* 3cxh_J*
Probab=99.70 E-value=1.1e-16 Score=102.88 Aligned_cols=82 Identities=12% Similarity=0.130 Sum_probs=61.3
Q ss_pred cceEEEecCCcEEEEEEEccCC--C-CEEEEEecCCC---eEE-Eec---ceEEc--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--K-VRVSWVRRRDW---HIL-TSG---VLTYT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~-~~V~W~k~~~~---~~l-~~~---~~~~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++.. . ..|.|||+.++ ..| ... ..... ..+||.+..+..++.++|+|+++
T Consensus 7 p~~~~~~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~~ 86 (127)
T 3cx5_J 7 SGAGLVQPSQSLSLTCSVTGYSITSGYYWNWIRLFPGNKLEWVGYISNVGDNNYNPSLKDRLSITRDTSKNQFFLKLNSV 86 (127)
T ss_dssp EECSEECTTSCEEEEEEEESSCTTTSSEEEEEEEETTTEEEEEEEEETTSCEEECTTTTTTBCCEEETTTTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEEeCcccCCCcEEEEEEECCCCCcEEEEEEeCCCCeeECcccCCcEEEEEeCCCCEEEEEECCC
Confidence 3456799999999999998643 2 68999999742 223 221 11221 24799988766678899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 87 ~~~Dsg~Y~C~~~~ 100 (127)
T 3cx5_J 87 TTEDTATYYCARSE 100 (127)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CHHHCEEEEEEEEe
Confidence 99999999999964
No 116
>3k74_B Nanobody; immunoglobulin, antibiotic resista methotrexate resistance, NADP, one-carbon metabolism, oxidoreductase, trimethoprim resistance; 1.95A {Lama glama}
Probab=99.70 E-value=1.5e-16 Score=100.70 Aligned_cols=80 Identities=16% Similarity=0.157 Sum_probs=60.7
Q ss_pred eEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Ee-cc---eEE--cCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 15 ISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TS-GV---LTY--TNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~-~~---~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
.+++.+|++|+|+|.++.. ....++|||+.++ ..| .. .. ... ...+||.+..+...+.++|+|+++++
T Consensus 7 ~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~ 86 (115)
T 3k74_B 7 GGLVQPGGSLRLSCAASGFTFNNYWMYWVRRAPGKGLEWVSMINPGGIITKYAESVKGRFTISRDNAKNTLYLQMNSLTS 86 (115)
T ss_dssp CCEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEECTTSCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CeEECCCCcEEEEEEEeCccccCCEEEEEEECCCCCeEEEEEEECCCCceeecccccccEEEEEcCCCCEEEEEECCCCh
Confidence 4688999999999999864 2468999999742 233 22 11 111 13579999876667789999999999
Q ss_pred CCCEEEEEeecC
Q psy14080 83 RDNGTYECQAQP 94 (113)
Q Consensus 83 ~D~G~Y~C~~~~ 94 (113)
+|+|+|+|++..
T Consensus 87 ~Dsg~Y~C~~~~ 98 (115)
T 3k74_B 87 EDTAVYYCAKDW 98 (115)
T ss_dssp GGCEEEEEEEST
T ss_pred HhCEEEEEEEEc
Confidence 999999999965
No 117
>3irg_A Titin; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_A 3q5o_A 2wp3_T* 2wwk_T 2wwm_D 2y9r_T*
Probab=99.70 E-value=2e-16 Score=95.94 Aligned_cols=95 Identities=19% Similarity=0.114 Sum_probs=73.4
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.+. .....+++.+|+++.|.|.+.+.+.+.|.|+|. +..+.. ..+.||.+.. +....+|.|.+++.+
T Consensus 4 ~pP~i~-~~~~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~--~~~~~~-----~~~~~~~~~~--~~~~~~L~i~~v~~~ 73 (100)
T 3irg_A 4 IPPKIE-ALPSDISIDEGKVLTVACAFTGEPTPEVTWSCG--GRKIHS-----QEQGRFHIEN--TDDLTTLIIMDVQKQ 73 (100)
T ss_dssp EEEEEC-CCCSEEEEETTSEEEEEEEEEEESCCEEEEEET--TEECCT-----TGGGTEEEEE--CSSEEEEEESSCCGG
T ss_pred CCCeee-cCCCcEEEcCCCcEEEEEEEEEcCCCceEEEEC--CEEeec-----CCCCEEEEEe--cCCEEEEEEeecCcc
Confidence 455554 345678999999999999999988899999983 332211 1356888763 345689999999999
Q ss_pred CCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
|+|.|+|.+. ..+..+..+.|.|.+
T Consensus 74 D~G~Y~C~a~n~~g~~~~~~~l~V~~ 99 (100)
T 3irg_A 74 DGGLYTLSLGNEFGSDSATVNIHIRS 99 (100)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cCEEEEEEEEeCCCcEEEEEEEEEEe
Confidence 9999999994 556778889998876
No 118
>3u6r_H Antibody 1:7 (heavy chain); IG-like domain, neutralizing single chain FV, immune system; 2.67A {Homo sapiens}
Probab=99.70 E-value=2.1e-16 Score=105.02 Aligned_cols=87 Identities=13% Similarity=0.128 Sum_probs=65.1
Q ss_pred eeEeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eec---c-eEE--cCCCCEEEEEeCCCCcEEE
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSG---V-LTY--TNDARFQVIHTDGSDDWNL 75 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~---~-~~~--~~~~R~~~~~~~~~~~~~L 75 (113)
.+++.+..+++.+|++|+|+|.++.. ....|+||||.+ +..| ... . ..+ ...+||.+..+...+.++|
T Consensus 5 ~l~qqp~~v~v~~G~sVtL~C~~s~~~~~~~~v~WyrQ~~g~~~~~L~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL 84 (149)
T 3u6r_H 5 QLLEQSGAEVKKPGSSVKVSCQVFGDTFSRYTIQWLRQAPGQGPEWMGNIIPVYNTPNYAQKFQGRLSITADDSTSTAYM 84 (149)
T ss_dssp EEEEECCCEEECTTCCEEEEEEEEESCCCTTTEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEE
T ss_pred EEEecCCCEEEcCCCCEEEEeEeeCCCcCCceEEEEEECCCCCCEEEEEEecCCCccccCcccCCCEEEEecCCCCEEEE
Confidence 34434567899999999999999763 356799999974 2333 221 1 112 1257999987666788999
Q ss_pred EEccCCCCCCEEEEEeecC
Q psy14080 76 QIKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~~~ 94 (113)
+|++++++|+|+|+|++..
T Consensus 85 ~I~~lq~~Dsg~Y~Ca~~~ 103 (149)
T 3u6r_H 85 ELSSLRSEDTAVYFCARVV 103 (149)
T ss_dssp EECSCCGGGCEEEEEEEEC
T ss_pred EECCCChhhCEEEEEEEec
Confidence 9999999999999999965
No 119
>3mbe_C I-AG7; T cell receptor, histocompatability antigen, MHC class II, I immune system; HET: NAG; 2.89A {Mus musculus}
Probab=99.70 E-value=1.7e-16 Score=112.24 Aligned_cols=99 Identities=15% Similarity=0.094 Sum_probs=72.9
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC----eEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW----HILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~----~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
.++.+..+++.+|++|+|+|.++.. ...|.||||.++ .+++..... ...+||.+..+..++.++|+|++++++|
T Consensus 4 V~Q~p~~v~v~~G~sVtL~C~~s~~-~~~v~Wyrq~pg~~~~~l~~~~~~~-~~~~Rfs~~~~~~~~~~sLtI~~lq~~D 81 (229)
T 3mbe_C 4 VEQNPPALSLYEGADSGLRCNFSTT-MKSVQWFQQNHRGRLITLFYLAQGT-KENGRLKSTFNSKERYSTLHIKDAQLED 81 (229)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSC-CSCEEEEEECSSSCBCCCEEESSEE-EEETTEEEEEETTTTEEEEEECSCCSTT
T ss_pred EEEcCCEEEEEcCCCEEEEEEEeCC-CcEEEEEEECCCCCcEEEEEeCCCC-ccCCCEEEEECCCCCEEEEEEECCcccC
Confidence 3555677899999999999999877 678999999732 233332222 3468999986677889999999999999
Q ss_pred CEEEEEeecCC---C--CeeEEEEeceecc
Q psy14080 85 NGTYECQAQPY---T--TTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~---~--~~s~~~~L~V~g~ 109 (113)
+|+|+|++... . .......|.|.+.
T Consensus 82 SG~Y~Ca~~~~~~~~~~~fG~GT~L~V~~~ 111 (229)
T 3mbe_C 82 SGTYFCAAEDGGSGNKLIFGTGTLLSVKPN 111 (229)
T ss_dssp CBEEEEEEECSSSTTCEEECCCCEEEEECC
T ss_pred CCCEEEEEEeCCCcccceeCCCEEEEEecc
Confidence 99999999642 1 1223346666653
No 120
>1u3h_A T-cell receptor alpha-chain; complex, immune system; 2.42A {Mus musculus} SCOP: b.1.1.1 PDB: 1b88_A 1kj2_A* 1kb5_A 1d9k_A*
Probab=99.53 E-value=1.2e-18 Score=109.40 Aligned_cols=84 Identities=17% Similarity=0.170 Sum_probs=63.5
Q ss_pred eecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---e-EEEecce-EEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---H-ILTSGVL-TYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~-~l~~~~~-~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
+.+..+++.+|++|+|+|.+++.+.+.|.|||+..+ . ++..... ....++||.+..+...+.++|+|++++++|+
T Consensus 4 Q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~Ds 83 (110)
T 1u3h_A 4 QSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGDS 83 (110)
Confidence 445678899999999999998777788999998632 2 2222211 1234679988754456789999999999999
Q ss_pred EEEEEeecC
Q psy14080 86 GTYECQAQP 94 (113)
Q Consensus 86 G~Y~C~~~~ 94 (113)
|+|+|++..
T Consensus 84 G~Y~C~~~~ 92 (110)
T 1u3h_A 84 ATYFCAASA 92 (110)
Confidence 999999964
No 121
>3g9a_B Minimizer; antibody complex, chromophore, luminescence, photoprotein, fluorescent protein/immune system complex, nanobody; HET: GYS; 1.61A {Lama pacos} SCOP: b.1.1.1
Probab=99.70 E-value=1.4e-16 Score=104.87 Aligned_cols=86 Identities=19% Similarity=0.208 Sum_probs=63.4
Q ss_pred EeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Ee--cc-eEEc--CCCCEEEEEeCCCCcEEEEEc
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TS--GV-LTYT--NDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~--~~-~~~~--~~~R~~~~~~~~~~~~~L~I~ 78 (113)
++.+ .+++.+|++|+|+|.++.. ....+.||||.++ ..| .. +. .... ..+||.+..+..++.++|+|+
T Consensus 7 ~Qs~-~v~v~~G~sVtL~C~~s~~~~~~~~v~WyrQ~~g~~p~~L~~~~~~~~~~~~~~~~~Rfs~s~~~~~~~~sLtI~ 85 (139)
T 3g9a_B 7 QESG-GGSVQAGGSLRLSCAASGDTFSSYSMAWFRQAPGKECELVSNILRDGTTTYAGSVKGRFTISRDDAKNTVYLQMV 85 (139)
T ss_dssp EEES-CEEECTTCCEEEEEEECSSCGGGSEEEEEEECTTSCEEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEEC
T ss_pred EcCC-CEEEecCCCEEEEEEEcCCccCCcEEEEEEECCCCCcEEEEEEECCCCEEcCCccCCCEEEEECCCCCEEEEEEC
Confidence 4444 4789999999999999864 3568999999742 333 22 11 1111 257999987666789999999
Q ss_pred cCCCCCCEEEEEeecCCC
Q psy14080 79 FLQKRDNGTYECQAQPYT 96 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~ 96 (113)
+++++|+|+|+|++...+
T Consensus 86 ~lq~~DSG~YyCav~~~~ 103 (139)
T 3g9a_B 86 NLKSEDTARYYCAADSGT 103 (139)
T ss_dssp SCCGGGCEEEC-CEESSC
T ss_pred CCCHHHCEEEEEEEEeCC
Confidence 999999999999997654
No 122
>3k81_A Single strand antibody VHH domain; krepa6, single domain antibody, immune system, RNA BIND protein; 3.40A {Lama glama}
Probab=99.70 E-value=5.3e-17 Score=105.29 Aligned_cols=80 Identities=20% Similarity=0.253 Sum_probs=61.2
Q ss_pred eEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Ee-cc--eEE--cCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 15 ISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TS-GV--LTY--TNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~-~~--~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.+++.+|++|+|+|.+++. ....+.||||.+ +..| .. +. ... ...+||.+..+..++.++|+|++++++
T Consensus 9 ~v~v~~G~~VtL~C~~s~~~~~~~~v~WyrQ~pg~~~~~L~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~~ 88 (127)
T 3k81_A 9 GGLAQAGGSLRLSCVVSGITFASEAWGWYRRAPGKQRELIAAINNEGRTNYVDSVKGRFTVSRDNAKNVMYLQMNSLKPE 88 (127)
T ss_dssp CCBCCBTCEEEEEEBCSCCCCSSSCEEEEEECSSSCEEEEEEECSSCCEEECTTTTTTCEEEEETTTTEEEEEEESBCTT
T ss_pred CEEEccCCCEEEEEEecCCCccCcEEEEEEECCCCCCEEEEEEECCCceEcCCcccCCEEEEEcCCCCEEEEEECCCChh
Confidence 5788999999999999764 356899999974 2333 32 11 111 135799998766678899999999999
Q ss_pred CCEEEEEeecC
Q psy14080 84 DNGTYECQAQP 94 (113)
Q Consensus 84 D~G~Y~C~~~~ 94 (113)
|+|+|+|++.+
T Consensus 89 Dsg~Y~Ca~~~ 99 (127)
T 3k81_A 89 DTAVYYCNANL 99 (127)
T ss_dssp TCEEEEEECCC
T ss_pred hCEEEEEEEee
Confidence 99999999965
No 123
>4ei6_A Valpha1 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_C 4elk_A 4elm_E* 3qeu_A 1ao7_D 3qdj_D 3qdg_D 3qfj_D 1qsf_D 1qse_D* 3d39_D* 3d3v_D* 3h9s_D 3pwp_D 2gj6_D 3utp_D* 3uts_D 1qrn_D 3hg1_D 3rdt_A ...
Probab=99.70 E-value=8.7e-17 Score=112.27 Aligned_cols=101 Identities=15% Similarity=0.040 Sum_probs=72.6
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---Ce-EEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WH-ILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~-~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
.++.+..+++.+|++|+|+|.++......++||||.+ .. ++..........+||.+..+..++.++|+|++++++|
T Consensus 5 V~Q~p~~v~v~~G~sVtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~lq~~D 84 (208)
T 4ei6_A 5 VQQSPESLSVPEGGMASLNCTSSDRNFQYFWWYRQHSGEGPKALMSIFSDGDKKEGRFTAHLNKASLHVSLHIRDSQPSD 84 (208)
T ss_dssp EEEECSEEEEETTCCEECEEEECCTTEEEEEEEEECTTSCCEEEEECCSSEEEEETTEEEEEBTTTTBC-CEECSCCGGG
T ss_pred EEEeCCEEEEECCCCEEEEEEEcCCCCceEEEEEeCCCCCcEEEEEECCCCcccCCcEEEEEcCCCCEEEEEEEeCcccC
Confidence 3455667899999999999999976656899999973 23 3332222112468999886677788999999999999
Q ss_pred CEEEEEeecCC------CCeeEEEEeceecc
Q psy14080 85 NGTYECQAQPY------TTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~------~~~s~~~~L~V~g~ 109 (113)
+|+|+|++... ...-....|.|++.
T Consensus 85 sG~Y~Ca~~~~~~~~~~~~fG~GT~L~V~~~ 115 (208)
T 4ei6_A 85 SALYFCAASEQNNYAQGLTFGLGTRVSVFPY 115 (208)
T ss_dssp CEEEEEEEEECCSSCCCCEECCCEEEEEECC
T ss_pred CCcEEEEEecCCCccccccCCCCEEEEEeCc
Confidence 99999999531 12234456777654
No 124
>1ypz_E T cell receptor delta, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.70 E-value=3.1e-16 Score=107.73 Aligned_cols=98 Identities=15% Similarity=0.099 Sum_probs=71.1
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEecceEEcCCCCEEEEEe-CCCCcEEEEEccCCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSGVLTYTNDARFQVIHT-DGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~D~ 85 (113)
++.+..+++.+|++|+|+|.+.... +.|.|||+.. ...+.........++||.+..+ ...+.++|+|++++.+|+
T Consensus 5 ~q~p~~v~v~~G~~v~L~C~~~~~~-~~v~W~r~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~~L~I~~v~~~D~ 83 (207)
T 1ypz_E 5 EQSPSALSLHEGTDSALRCNFTTTM-RSVQWFRQNSRGSLISLFYLASGTKENGRLKSAFDSKERRYSTLHIRDAQLEDS 83 (207)
T ss_dssp EESCSEEEEETTCCEEEEEEESSCC-SEEEEEEECTTSCCEEEEEESSEEEEETTEEEEECTTTCSEEEEEECSCCGGGC
T ss_pred EECCCeEEEccCCcEEEEEEEeCCC-eEEEEEEeCCCCCeEEEEEEccCCccCCCEEEEeccCCCCEEEEEECCCCHHHC
Confidence 4556778999999999999998654 4799999863 2333322111224689998764 446789999999999999
Q ss_pred EEEEEeecCCC------------CeeEEEEeceec
Q psy14080 86 GTYECQAQPYT------------TTSHSQNAPGLG 108 (113)
Q Consensus 86 G~Y~C~~~~~~------------~~s~~~~L~V~g 108 (113)
|+|+|++.... .....+.|.|.+
T Consensus 84 G~Y~C~~~~~~~~~p~~~~~~~~~~~~~t~L~V~~ 118 (207)
T 1ypz_E 84 GTYFCAADTWHISEGYELGTDKLVFGQGTQVTVEP 118 (207)
T ss_dssp EEEEEEEECBCCCTTCCCCCCCCEECCCEEEEEEC
T ss_pred EEEEEEEecCCcccccccccceeeecCccEEEEcc
Confidence 99999996431 122346788875
No 125
>2kdg_A Myotilin; immonoglobulin domain, actin-binding, structural protein, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.69 E-value=2e-16 Score=96.38 Aligned_cols=94 Identities=17% Similarity=0.203 Sum_probs=69.3
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+.. ....+++.+|++++|.|.+.+.+.+.|.|+|. +..+. .+.++.... ...+.++|.|.+++.+|
T Consensus 5 ~P~~~~-~p~~~~~~~G~~~~l~C~~~g~p~p~v~W~~~--g~~~~-------~~~~~~~~~-~~~~~~~L~i~~v~~~D 73 (100)
T 2kdg_A 5 PPRFIQ-VPENMSIDEGRFCRMDFKVSGLPAPDVSWYLN--GRTVQ-------SDDLHKMIV-SEKGLHSLIFEVVRASD 73 (100)
T ss_dssp EEECCC-CCCCEEEETTCCEEEEEECEEESCCEEEEEET--TEEEC-------CCSSSCEEE-ETTTEEEEEESSCCGGG
T ss_pred CCeEEe-CCCCEEecCCCEEEEEEEEEeeCCCEEEEEEC--CEECc-------CCCcEEEEE-cCCCeEEEEECCCCccc
Confidence 444433 45678999999999999999888899999984 33332 222222222 13355799999999999
Q ss_pred CEEEEEee-cCCCCeeEEEEeceecc
Q psy14080 85 NGTYECQA-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~-~~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+ +..+..+..+.|.|.+.
T Consensus 74 ~G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2kdg_A 74 AGAYACVAKNRAGEATFTVQLDVLAK 99 (100)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CEEEEEEEEcCCCeEEEEEEEEEEec
Confidence 99999999 45677888999999864
No 126
>1a2y_B IGG1-kappa D1.3 FV (heavy chain); complex (immunoglobulin/hydrolase), immunoglobulin V region, signal, hydrolase, glycosidase, bacteriolytic enzyme, egg white; 1.50A {Mus musculus} SCOP: b.1.1.1 PDB: 1a7r_H 1dvf_B 1g7h_B 1g7i_B 1g7j_B 1g7l_B 1g7m_B 1kir_B 1vfa_B 1vfb_B 1kiq_B 1a7o_H 1a7n_H 1a7p_H 1kip_B 1a7q_H 1dl7_H* 1bvk_B 1bvl_A 1p4i_H ...
Probab=99.69 E-value=1.4e-16 Score=100.60 Aligned_cols=81 Identities=17% Similarity=0.188 Sum_probs=60.8
Q ss_pred ceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eec---ceEEc--CCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSG---VLTYT--NDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~---~~~~~--~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
..+++.+|++|+|+|.+++. ....|.|||+.+ +..+ ... ..... ..+||.+..+...+.++|+|+++++
T Consensus 8 ~~~~~~~G~~vtL~C~~~~~~~~~~~v~Wyrq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~~ 87 (116)
T 1a2y_B 8 GPGLVAPSQSLSITCTVSGFSLTGYGVNWVRQPPGKGLEWLGMIWGDGNTDYNSALKSRLSISKDNSKSQVFLKMNSLHT 87 (116)
T ss_dssp CCSEECTTSCEEEEEEEESSCTTSSEEEEEEECTTSCCEEEEEECTTSCEEECTTTGGGEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEEeCCCcEEEEEEEcCCCcCCcEEEEEEeCCCCCcEEEEEEecCCCeeeCcccCCcEEEEEECCCCEEEEEECCCCH
Confidence 44789999999999999854 347899999973 2333 221 11121 1469998865556789999999999
Q ss_pred CCCEEEEEeecC
Q psy14080 83 RDNGTYECQAQP 94 (113)
Q Consensus 83 ~D~G~Y~C~~~~ 94 (113)
+|+|+|+|++..
T Consensus 88 ~Dsg~Y~C~~~~ 99 (116)
T 1a2y_B 88 DDTARYYCARER 99 (116)
T ss_dssp GGCEEEEEEEES
T ss_pred HHCEEEEEEEec
Confidence 999999999964
No 127
>1dqt_A CTLA4, cytotoxic T lymphocyte associated antigen 4; immunoglobulin variable domain-like beta-sandwich, homodimer, immune system; 2.00A {Mus musculus} SCOP: b.1.1.1
Probab=99.69 E-value=1.1e-16 Score=101.19 Aligned_cols=81 Identities=15% Similarity=0.090 Sum_probs=56.2
Q ss_pred ecceEEEecCCcEEEEEEEccCCC---CEEEEEecCCCe------EEE-ec-ceEEcCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVK---VRVSWVRRRDWH------ILT-SG-VLTYTNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~---~~V~W~k~~~~~------~l~-~~-~~~~~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
.+..+++.+|++|+|+|.++.... ..|.|||+..+. ... .. ...+..+-+|.... +.+.++|+|+++
T Consensus 5 ~p~~~~~~~G~~v~L~C~~~~~~~~~~~~v~Wyrq~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~~ 82 (117)
T 1dqt_A 5 QPSVVLASSHGVASFPCEYSPSHNTDEVRVTVLRQTNDQMTEVCATTFTEKNTVGFLDYPFCSGTF--NESRVNLTIQGL 82 (117)
T ss_dssp CCSEEECCTTSCEEEEEEEESCCTTCEEEEEEEEECSSCEEEEEEEEECSSSBEECTTCTTEEEEE--ETTEEEEEECSC
T ss_pred CCceEEEeCCCeEEEEEEeeCCCCCCccEEEEEecCCCCCcEEEEEEEecCccceEeccEEEeccc--CCCEEEEEEeCC
Confidence 345678899999999999984433 389999998543 111 11 11222222345443 345789999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 83 ~~~Dsg~Y~C~~~~ 96 (117)
T 1dqt_A 83 RAVDTGLYLCKVEL 96 (117)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CcccCEEEEEEEee
Confidence 99999999999953
No 128
>3rgv_A YAE62 TCR A chain; TCR, MHC, MHC class I, immune system; 2.90A {Mus musculus} PDB: 3c60_A
Probab=99.69 E-value=1.7e-16 Score=110.21 Aligned_cols=100 Identities=15% Similarity=0.129 Sum_probs=72.1
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEE-Eecc-eEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHIL-TSGV-LTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l-~~~~-~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++....+++.+|++|+|+|.++......++||||.+ ...| +... ......+||.+..+..++.++|+|++++++|
T Consensus 4 tQ~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~D 83 (200)
T 3rgv_A 4 TQMQGQVTLSENDFLFINCTYSTTGYPTLFWYVQYSGEGPQLLLQVTTANNKGSSRGFEATYDKGTTSFHLQKTSVQEID 83 (200)
T ss_dssp ECCCSEEEEETTCCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSTTCEEEETTEEEECBTTTTBCCEEESSCCSTT
T ss_pred EECCCEEEEeCCCCEEEEEEecCCCCcEEEEEEeCCCCCcEEEEEecCCCCcccCCceEEEECCCCCEEEEEEcCCcCcc
Confidence 455667899999999999999976667899999963 2333 2221 1112358999886667788999999999999
Q ss_pred CEEEEEeecCC--CCeeEEEEeceecc
Q psy14080 85 NGTYECQAQPY--TTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~--~~~s~~~~L~V~g~ 109 (113)
+|+|+|++... ...-....|.|.+.
T Consensus 84 sG~Y~Ca~~~~~~~~fG~GT~L~V~~~ 110 (200)
T 3rgv_A 84 SAVYYCAANSGTYQRFGTGTKLQVVPN 110 (200)
T ss_dssp CEEEEEEEESSSCCCCCCCEEEEEECC
T ss_pred CCCEEEEeccCcccccCcCEEEEEeCC
Confidence 99999999532 12233456666654
No 129
>2x1q_A Gelsolin nanobody; contractIle protein; 1.06A {Lama glama} PDB: 2x1p_A 2xa3_A 3k7u_A 3sn6_N* 3stb_A 2x1o_A 3k80_A 1ol0_A 1u0q_A 1qd0_A* 3ezj_B 3p0g_B* 1mvf_A 1t2j_A
Probab=99.69 E-value=7.5e-17 Score=103.78 Aligned_cols=82 Identities=16% Similarity=0.188 Sum_probs=58.9
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eecc----eEEc--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSGV----LTYT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~~----~~~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.+ +..| .... .... ..+||.+..+..++.++|+|+++
T Consensus 7 p~~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~ 86 (127)
T 2x1q_A 7 SGGGLVQPGGSLRLSCAASGRTFSNYRMGWFRQAPGKEREFVATISQSGAATAYADSVKGRFTFSRDNAKNLLYLEMLSL 86 (127)
T ss_dssp ECCEEECTTCCEEEEEC------CCSEEEEEEECTTSCCEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEcCCCCEEEEEEeCCcccCCcEEEEEEECCCCCCEEEEEEecCCCceeeCcccCCcEEEEEeCCCCEEEEEEcCC
Confidence 345789999999999999753 357899999974 2233 2211 1111 24799998655567899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 87 ~~~Dsg~Y~C~~~~ 100 (127)
T 2x1q_A 87 EPEDTAVYYCAASS 100 (127)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred CHHHCEEEEEEEEe
Confidence 99999999999964
No 130
>2vyr_E Human single domain antibody; zinc, complex, nucleus, human MDM4, immune system, zinc-finger, polymorphism, metal-binding; 2.00A {Homo sapiens} PDB: 1igm_H 2a9n_H* 2a9m_H
Probab=99.69 E-value=4.9e-16 Score=103.47 Aligned_cols=81 Identities=15% Similarity=0.151 Sum_probs=61.8
Q ss_pred ceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeE-EEecc----eEEc--CCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHI-LTSGV----LTYT--NDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~-l~~~~----~~~~--~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
..+++.+|++|+|+|.+++. ....|.||||.+ ... +.... .... ..+||.+..+..++.++|+|++++
T Consensus 8 ~~~~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~ 87 (153)
T 2vyr_E 8 GGGLVQPGGSLRLSCAASGFTFEEYAMLWVRQAPGKGLEWVSGINARGYTTYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (153)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGCCEEEEEECTTSCCEEEEEECTTSCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCCEEEEEEEeCCccCCCEEEEEEECCCCCcEEEEEEECCCCceeeCCccCCcEEEEEcCCCCEEEEEECcCC
Confidence 36899999999999999854 246799999974 233 33221 1121 257999987666789999999999
Q ss_pred CCCCEEEEEeecC
Q psy14080 82 KRDNGTYECQAQP 94 (113)
Q Consensus 82 ~~D~G~Y~C~~~~ 94 (113)
++|+|+|+|++..
T Consensus 88 ~~Dsg~Y~C~~~~ 100 (153)
T 2vyr_E 88 TEDTAVYYCAKPW 100 (153)
T ss_dssp GGGCEEEEEEECS
T ss_pred HHHCEEEEEEEEe
Confidence 9999999999964
No 131
>3q0h_A T cell immunoreceptor with IG and ITIM domains; immune receptor, adhesion, structural genomics, NEW YORK STR genomics research consortium, nysgrc; 1.70A {Homo sapiens} PDB: 3rq3_A 3udw_A* 3ucr_A
Probab=99.69 E-value=1.5e-16 Score=101.09 Aligned_cols=97 Identities=14% Similarity=0.071 Sum_probs=68.8
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCCeEEEe-cc--eEEc--CCCCEEEEEeCCCCcEEEEE
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDWHILTS-GV--LTYT--NDARFQVIHTDGSDDWNLQI 77 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~~~l~~-~~--~~~~--~~~R~~~~~~~~~~~~~L~I 77 (113)
++.|.+ ..++++.+|++|+|+|.+... ....|.|+|++. .+... .. .... -.+|+.+. .+++|+|
T Consensus 4 ~~~v~~--~~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~k~~~-~i~~~~~~~~~~~~~~~~~R~~~~-----~~~sL~I 75 (117)
T 3q0h_A 4 TGTIET--TGNISAEKGGSIILQCHLSSTTAQVTQVNWEQQDQ-LLAICNADLGWHISPSFKDRVAPG-----PGLGLTL 75 (117)
T ss_dssp SCEEEE--SCCEEEETTCCEEECEEEESCCCEEEEEEEEETTE-EEEEEETTTEEECCGGGTTTEEEC-----STTCEEE
T ss_pred eEEEEc--cCCEEEecCCCEEEEEEecCCCCCEEEEEEEeCCE-EEEEEECCCCceeCccccCcEEeC-----CceEEEE
Confidence 444444 345899999999999999873 335799999753 33222 11 1111 14688753 3679999
Q ss_pred ccCCCCCCEEEEEeecC--CCCeeEEEEeceecc
Q psy14080 78 KFLQKRDNGTYECQAQP--YTTTSHSQNAPGLGD 109 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~--~~~~s~~~~L~V~g~ 109 (113)
++++.+|+|.|+|.+.+ .+..+..+.|.|++.
T Consensus 76 ~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V~~p 109 (117)
T 3q0h_A 76 QSLTVNDTGEYFCIYHTYPDGTYTGRIFLEVLES 109 (117)
T ss_dssp CSCCGGGCEEEEEEEEEETTCCEEEEEEEEEECC
T ss_pred eeCChhhCEEEEEEEEECCCCCeEEEEEEEEEcc
Confidence 99999999999999854 456778899999874
No 132
>1jtp_A Single-domain antibody; immunoglobulin, heavy chain antibody, VHH, interface, binding, antibody, hydrolase; 1.90A {Camelus dromedarius} SCOP: b.1.1.1 PDB: 1jto_A 1mel_A 2x89_A
Probab=99.69 E-value=5.4e-16 Score=102.55 Aligned_cols=82 Identities=13% Similarity=0.166 Sum_probs=62.1
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eecc----eEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSGV----LTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~~----~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|+|||+.+ +..| .... ... ...+||.+..+..++.++|+|+++
T Consensus 7 p~~~~v~~G~svtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~ 86 (148)
T 1jtp_A 7 SGGGSVQAGGSLRLSCAASGYTIGPYCMGWFRQAPGKEREGVAAINMGGGITYYADSVKGRFTISQDNAKNTVYLLMNSL 86 (148)
T ss_dssp ECCEEEETTCCEEEEEEEESCSSCCSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEECCTTSEEEEEECSC
T ss_pred cCCEEEecCCCEEEEEEEeCccCCCCEEEEEEECCCCCcEEEEEEECCCCceeeCCccCCcEEEEEcCCCCEEEEEECcC
Confidence 446889999999999999853 357899999974 2333 2211 111 125799998766678899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+++|+|+|+|++..
T Consensus 87 ~~~Dsg~Y~C~~~~ 100 (148)
T 1jtp_A 87 EPEDTAIYYCAADS 100 (148)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred ChhHCEEEEEEEEc
Confidence 99999999999964
No 133
>1lp9_E T-cell receptor alpha chain; immunoregulatory complex, class I MHC:TCR CO-crystal, immune; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 2j8u_E 2jcc_E 2uwe_E 1nfd_A*
Probab=99.69 E-value=5.1e-17 Score=111.50 Aligned_cols=101 Identities=14% Similarity=0.089 Sum_probs=72.3
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---e-EEEecce-EEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---H-ILTSGVL-TYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~-~l~~~~~-~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.++....+++.+|++|+|+|.+++.....|.|||+.++ . +++.... ....++||.+..+..++.++|+|++++.+
T Consensus 4 v~Q~p~~v~v~~G~~v~L~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~ 83 (194)
T 1lp9_E 4 VTQTEGLVTLTEGLPVMLNCTYQSTYSPFLFWYVQHLNEAPKLLLKSFTDNKRPEHQGFHATLHKSSSSFHLQKSSAQLS 83 (194)
T ss_dssp EEECCSEEEEETTSCEEECEEEECSSSCCEEEEEECTTSCCEEEEESCSSTTCCCCSSCEECCBGGGTBCCEEESSCCGG
T ss_pred cEecCCEEEEecCCCEEEEEEeCCCCCceEEEEEeCCCCCeEEEEEEcCCCCcccCCCeEEEecCCCCEEEEEEcccCcc
Confidence 34556778999999999999998776678999999742 3 3332211 11236899987555567899999999999
Q ss_pred CCEEEEEeecC----CCC--eeEEEEeceecc
Q psy14080 84 DNGTYECQAQP----YTT--TSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~----~~~--~s~~~~L~V~g~ 109 (113)
|+|+|+|++.. ... ......|.|++.
T Consensus 84 Dsg~Y~C~~~~~~~~~~~~~~g~gt~L~V~~~ 115 (194)
T 1lp9_E 84 DSALYYCALFLASSSFSKLVFGQGTSLSVVPN 115 (194)
T ss_dssp GCEEEEEEEEECSSSSCEEEECCCEEEEEECC
T ss_pred cCeeEEEEEecccCCcceeeeccCceEEecCc
Confidence 99999999964 121 113457777654
No 134
>3udw_C Poliovirus receptor; PVR tigit IGSF signal transduction immunology, IGSF, cell SU receptor signalling, glycosylation, membrane protein; HET: NAG; 2.90A {Homo sapiens}
Probab=99.69 E-value=2e-16 Score=98.40 Aligned_cols=100 Identities=17% Similarity=0.234 Sum_probs=67.3
Q ss_pred EeecceEEEecCCcEEEEEEEc-cCCCC----EEEEEecCCC--eEEEe-cc-eEEcCCCCEEEEEeC-CC--CcEEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVR-DIVKV----RVSWVRRRDW--HILTS-GV-LTYTNDARFQVIHTD-GS--DDWNLQI 77 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~-~~~~~----~V~W~k~~~~--~~l~~-~~-~~~~~~~R~~~~~~~-~~--~~~~L~I 77 (113)
......+++.+|++|+|+|.+. ..+.+ .|.|||+... ..++. +. ..+...+|+.+..+. .. ++++|+|
T Consensus 4 v~~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I 83 (118)
T 3udw_C 4 VQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASLRM 83 (118)
T ss_dssp EECCSEEEEETTSCEEECCEEECCTTCCCEEEEEEEEETTCSBCSEEEETTTEEEETTCSSEEETTCCTTSCCCBCCEEE
T ss_pred EeCCCeEEEeeCCcEEEEEEeECCCCCCCceEEEEEEEcCCCceEEEEeCCCCCccCCcCcEEEecccccCCCCCcEEEE
Confidence 3445558899999999999995 33332 4999998532 12222 11 122336687765221 11 2789999
Q ss_pred ccCCCCCCEEEEEeecC--CCCeeEEEEeceecc
Q psy14080 78 KFLQKRDNGTYECQAQP--YTTTSHSQNAPGLGD 109 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~--~~~~s~~~~L~V~g~ 109 (113)
.+++.+|+|.|+|.+.. .+..+..+.|.|++.
T Consensus 84 ~~v~~~D~G~Y~C~v~~~~~~~~~~~~~L~V~~~ 117 (118)
T 3udw_C 84 FGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLAK 117 (118)
T ss_dssp CSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEC-
T ss_pred eecChHHCeEEEEEEEECCCCCccceEEEEEEeC
Confidence 99999999999999954 346678889988753
No 135
>1x44_A Myosin-binding protein C, SLOW-type; IG-like domain, SLOW- type/skeletal muscle SLOW-isoform, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.69 E-value=2e-16 Score=97.48 Aligned_cols=92 Identities=14% Similarity=0.111 Sum_probs=69.8
Q ss_pred cCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCC--CEEEEEeCCCCcEEEEEccC
Q psy14080 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDA--RFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 3 ~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~--R~~~~~~~~~~~~~L~I~~v 80 (113)
+.|+..+....+++++.+|++++|.|.+.+ +.+.|.|||. +..+. .+. ||.+.. +....+|.|.++
T Consensus 4 g~~p~~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~--g~~l~-------~~~~~~~~~~~--~~~~~~L~I~~~ 71 (103)
T 1x44_A 4 GSSGIMVTKQLEDTTAYCGERVELECEVSE-DDANVKWFKN--GEEII-------PGPKSRYRIRV--EGKKHILIIEGA 71 (103)
T ss_dssp CCSSCCCSBCCCCEEEETTEEEEEEEECSS-SSCCCEEEET--TEECC-------CSTTCSEEEEE--ETTEEEEEEEEE
T ss_pred CCCCceeeccCCCEEEECCCCEEEEEEecC-CCCeEEEEEC--CEECC-------CCCceEEEEEE--cCCEEEEEECCC
Confidence 345554555566789999999999999987 5689999984 33322 233 778764 235679999999
Q ss_pred CCCCCEEEEEeecCCCCeeEEEEeceecc
Q psy14080 81 QKRDNGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
+.+|+|.|+|.+.. .+..+.|.|.+.
T Consensus 72 ~~~D~G~Y~C~a~n---~~~~~~l~V~~~ 97 (103)
T 1x44_A 72 TKADAAEYSVMTTG---GQSSAKLSVDLK 97 (103)
T ss_dssp CTTTCSEEEEEETT---EEEEEEEEEECC
T ss_pred CcccCEEEEEEECC---CcEEEEEEEeCC
Confidence 99999999999965 567788888764
No 136
>1oga_D T-cell receptor alpha chain V region, beta-2-microglobulin; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2xna_A 2xn9_A 2vlm_D 2vlk_D 2vlj_D 2vlr_D 2cdf_A 2wbj_C* 3qdm_D 3qeq_D
Probab=99.69 E-value=1.8e-16 Score=110.56 Aligned_cols=99 Identities=15% Similarity=0.047 Sum_probs=70.6
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---e-EEEecc-eEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---H-ILTSGV-LTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~-~l~~~~-~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++....+++.+|++|+|+|.+. .....|.|||+..+ . +++... .....++||.+..+..++.++|+|++++.+|
T Consensus 5 ~Q~p~~v~v~~G~~vtL~C~~~-~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~v~~~D 83 (215)
T 1oga_D 5 EQSPQFLSIQEGENLTVYCNSS-SVFSSLQWYRQEPGEGPVLLVTVVTGGEVKKLKRLTFQFGDARKDSSLHITAAQPGD 83 (215)
T ss_dssp EEECSEEEEETTCCEEEEEECS-SCCSCEEEEEECTTSCCEEEEEECSTTCEEEETTEEEEECTTSSEEEEEESSCCGGG
T ss_pred EECCCEEEEecCCCEEEEEEEc-CCCceEEEEEeCCCCCcEEEEEEcCCCCcccCCCEEEEEcCCCCEEEEEEccCCccc
Confidence 4556678999999999999994 34568999999742 2 333321 1112368999987667788999999999999
Q ss_pred CEEEEEeecCC-C--CeeEEEEeceecc
Q psy14080 85 NGTYECQAQPY-T--TTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~-~--~~s~~~~L~V~g~ 109 (113)
+|+|+|++... . .......|.|+..
T Consensus 84 sg~Y~C~~~~~~~~~~fg~gt~L~V~~~ 111 (215)
T 1oga_D 84 TGLYLCAGAGSQGNLIFGKGTKLSVKPN 111 (215)
T ss_dssp CEEEEEEEECTTSSEEECCCEEEEEECC
T ss_pred CceEEEEEecccccceeCCCEEEEEecc
Confidence 99999999642 1 1122346666543
No 137
>1xt5_A Variable region-containing chitin-binding protein 3; innate immunity, VCBP, primordial antigen receptor, florida lancelet, amphioxus; 1.15A {Branchiostoma floridae}
Probab=99.69 E-value=3.5e-16 Score=100.12 Aligned_cols=97 Identities=13% Similarity=0.079 Sum_probs=69.1
Q ss_pred EeecceEEEecCCcEEEEEEEcc---CCCCEEEEEecCCC---eEEEecce-------------E---EcC--CCCEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRD---IVKVRVSWVRRRDW---HILTSGVL-------------T---YTN--DARFQVI 65 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~---~~~~~V~W~k~~~~---~~l~~~~~-------------~---~~~--~~R~~~~ 65 (113)
++....+++.+|++|+|+|.+.. .+.+.|.|||+... .++..... . ... .+|+.+.
T Consensus 8 ~~~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~ 87 (135)
T 1xt5_A 8 RTTHTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVA 87 (135)
T ss_dssp ECSCSEEEEETTSCEEECCEEEEETCCSCCEEEEEEESSSSSEEEEEEEEECCCCTTCCCCTTSEEEEECGGGTTTEEES
T ss_pred eCCCceEEEeCCCCEEEeeEeecCCCCCccEEEEEeeCCCCCceEEEEeccccccccccccccccccccChhhcCcEEEe
Confidence 44556789999999999999863 45678999998743 23332100 0 011 2788864
Q ss_pred EeCCCCcEEEEEccCCCCCCEEEEEeecCC------CCeeEEEEeceecc
Q psy14080 66 HTDGSDDWNLQIKFLQKRDNGTYECQAQPY------TTTSHSQNAPGLGD 109 (113)
Q Consensus 66 ~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~------~~~s~~~~L~V~g~ 109 (113)
. .++++|+|++++.+|+|.|+|.+... ......+.|.|.|.
T Consensus 88 ~---~~~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~g~~~~~~~L~V~g~ 134 (135)
T 1xt5_A 88 N---LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 134 (135)
T ss_dssp C---TTSCCEEECSCCGGGCEEEEEEEECSSCCSGGGEEEEEEEEEEETT
T ss_pred c---CCCCeEEECCCChhhCcEEEEEEEcCCccccccccceeEEEEEecC
Confidence 2 35689999999999999999999642 23348899999874
No 138
>3irg_B Obscurin-like protein 1; IG-like, titin, OBSL1, complex, alternative splicing, ATP-binding, calcium, calmodulin-binding, cardiomyopathy; 1.30A {Homo sapiens} PDB: 3knb_B 2wp3_O* 2wwm_C 2wwk_O
Probab=99.69 E-value=3.2e-16 Score=96.50 Aligned_cols=93 Identities=16% Similarity=0.153 Sum_probs=72.1
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.+.. ....+++.+|+++.|.|.+.+.+.+.|.|+|. +..+ ..+.|+.+.. +...++|.|.+++.+
T Consensus 12 ~~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~--~~~~-------~~~~~~~~~~--~~~~~~L~i~~~~~~ 79 (107)
T 3irg_B 12 SPPCFLR-FPRPVRVVSGAEAELKCVVLGEPPPVVVWEKG--GQQL-------AASERLSFPA--DGAEHGLLLTAALPT 79 (107)
T ss_dssp EEEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEET--TEEC-------CCCSSEECCE--ETTEEEEEESSCCGG
T ss_pred CCCeeEc-CCccEEEeCCCeEEEEEEEeecCCCEEEEEEC--CeEC-------CCCCcEEEEe--CCCEEEEEEccCCHH
Confidence 3555543 44678999999999999999988889999984 2222 2356777653 245679999999999
Q ss_pred CCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
|+|.|+|.+. ..+..+..+.|.|.+
T Consensus 80 D~G~Y~C~a~n~~g~~~~~~~l~V~~ 105 (107)
T 3irg_B 80 DAGVYVCRARNAAGEAYAAAAVTVLE 105 (107)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred hCEEEEEEEEcCCCcEEEEEEEEEEc
Confidence 9999999994 556777888998875
No 139
>1sjv_A R9; camelids antibody, domain swapping, heavy chain antibody, AN; 1.94A {Lama glama} SCOP: b.1.1.1
Probab=99.68 E-value=6.4e-17 Score=101.83 Aligned_cols=82 Identities=13% Similarity=0.153 Sum_probs=59.8
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eecc---eEEc--CCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSGV---LTYT--NDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~~---~~~~--~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.+ +..| .... .... ..+||.+..+..++.++|+|++++
T Consensus 7 ~~~~~~~~G~~vtL~C~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~~~ 86 (114)
T 1sjv_A 7 SGGGLVQAGESLKLSCAASGNTFSGGFMGWYRQAPGKQRELVATINSRGITNYADFVKGRFTISRDNAKKTVYLEMNSLE 86 (114)
T ss_dssp -CCCCCCTTCCEEEEECCCC-----CCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTCEEEEECTTTCCEEEEECSCC
T ss_pred CCCEEEcCCCCEEEEEEEcCccccCCeEEEEEECCCCCCEEEEEEcCCCcceeCcccCCcEEEEEeCCCCEEEEEECCCC
Confidence 346788999999999999753 356899999973 2333 2221 1121 257999986556778999999999
Q ss_pred CCCCEEEEEeecC
Q psy14080 82 KRDNGTYECQAQP 94 (113)
Q Consensus 82 ~~D~G~Y~C~~~~ 94 (113)
++|+|+|+|++..
T Consensus 87 ~~DsG~Y~C~~~~ 99 (114)
T 1sjv_A 87 PEDTAVYYCYTHY 99 (114)
T ss_dssp GGGCSEEEEEECC
T ss_pred HHHCEEEEEeEEc
Confidence 9999999999965
No 140
>1gl4_B Basement membrane-specific heparan sulfate proteoglycan core protein; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: b.1.1.4
Probab=99.68 E-value=4.8e-16 Score=94.70 Aligned_cols=89 Identities=15% Similarity=0.091 Sum_probs=67.2
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEc-cCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVR-DIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~-~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
.|+.+.......+++.+|++++|.|.+. +.+.+.+.|||...... ..+.... +.+|.|.+++.
T Consensus 8 ~~~~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~k~~~~~~----------~~~~~~~------~~~L~i~~v~~ 71 (98)
T 1gl4_B 8 KPIMVTVEEQRSQSVRPGADVTFICTAKSKSPAYTLVWTRLHNGKL----------PSRAMDF------NGILTIRNVQP 71 (98)
T ss_dssp -CEEEEECSCCEEEECTTCCEEEEEEEEESSSCCEEEEEEGGGBCC----------CTTEEEE------TTEEEECSCCG
T ss_pred CCcEEEEeCCCCeEEecCCCEEEEEeCCCCCCCcEEEEEeCCCCCC----------CceeecC------CCEEEEeCCCh
Confidence 3566666777888999999999999998 67888999999642211 1222211 34899999999
Q ss_pred CCCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 83 RDNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 83 ~D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
+|+|.|+|.+. ..+..+..+.|.|.+
T Consensus 72 ~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (98)
T 1gl4_B 72 SDAGTYVCTGSNMFAMDQGTATLHVQV 98 (98)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEC-
T ss_pred hhCEEEEEEecCCCCccccEEEEEEeC
Confidence 99999999994 557778888888864
No 141
>3r0m_A Llama VHH A12; IG domain, immune system; 1.50A {Lama glama} PDB: 3rjq_B* 1g9e_A 1hcv_A 1shm_A 3qxw_A 3qxv_A
Probab=99.68 E-value=2.5e-16 Score=104.04 Aligned_cols=83 Identities=17% Similarity=0.173 Sum_probs=62.4
Q ss_pred ecceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Ee--cc-eE-E--cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TS--GV-LT-Y--TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~--~~-~~-~--~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
.+..+++.+|++|+|+|.+++. ....+.||||.+ +..| .. .. .. . ...+||.+..+...+.++|+|++
T Consensus 6 q~~~~~v~~G~svtL~C~~s~~~~~~~~v~WyrQ~pg~~~~~L~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~ 85 (143)
T 3r0m_A 6 ESGGGLVQAGGSLRLSCTASGRISSSYDMGWFRQAPGKEREFVAAISWSGGTTDYADSVKGRFAISKDNAKNAVYLQMNS 85 (143)
T ss_dssp EECCEEEETTCCEEEEEEESSCCCTTEEEEEEEECTTSCCEEEEEEETTTCCEEECTTTTTSEEEEEEGGGTEEEEEECS
T ss_pred eCCcEEEccCCCEEEEEEeeCCCcCCcEEEEEEECCCCCCEEEEEEEcCCCcEecCcccCCCEEEEEcCCCCEEEEEECC
Confidence 3446789999999999999864 356899999974 2333 22 11 11 1 13589999876556789999999
Q ss_pred CCCCCCEEEEEeecC
Q psy14080 80 LQKRDNGTYECQAQP 94 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~ 94 (113)
++++|+|+|+|++.+
T Consensus 86 lq~~Dsg~Y~Ca~~~ 100 (143)
T 3r0m_A 86 LKPEDTAVYYCAAKW 100 (143)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CChhhCEEEEEEEEe
Confidence 999999999999964
No 142
>1dee_B IGM RF 2A2; FAB-IBP complex 2.7A resolution binding outside the antigen combining site superantigen FAB VH3 specificity; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1hez_B 1adq_H
Probab=99.68 E-value=2.5e-16 Score=108.69 Aligned_cols=95 Identities=13% Similarity=0.119 Sum_probs=68.2
Q ss_pred ceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eecc----eEEc--CCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSGV----LTYT--NDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~~----~~~~--~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
..+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ .... .... .++||.+..+...++++|+|++++
T Consensus 8 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 87 (223)
T 1dee_B 8 GGGVVQPGKSLRLSCAASGFTFSGYGMHWVRQAPGKGLEWVALISYDESNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 87 (223)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCCEEECTTTBTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEcCCCcEEEEEEecCcccCCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCeEEEEecCCCCEEEEEECCCC
Confidence 568899999999999998754 478999998632 222 2211 1111 247999886655678999999999
Q ss_pred CCCCEEEEEeecCCC-------CeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPYT-------TTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~-------~~s~~~~L~V~g 108 (113)
.+|+|.|+|++...+ .....+.|.|.+
T Consensus 88 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~ 121 (223)
T 1dee_B 88 AEDTAVYYCAKVKFYDPTAPNDYWGQGTLVTVSS 121 (223)
T ss_dssp GGGCEEEEEEEESSSSTTCCEEEECCCEEEEECS
T ss_pred HHHCEEEEEEEeccccCcccceeecCcEEEEEcc
Confidence 999999999996542 122345777764
No 143
>1eaj_A Coxsackie virus and adenovirus receptor; virus/viral protein receptor, immunoglobulin V domain fold, symmetric dimer; 1.35A {Homo sapiens} SCOP: b.1.1.1 PDB: 1f5w_A 2j12_B 2j1k_A 2wbw_B* 2w9l_A* 1rsf_A 1jew_R 1kac_B 1p69_B 1p6a_B
Probab=99.68 E-value=1.4e-16 Score=99.68 Aligned_cols=97 Identities=16% Similarity=0.181 Sum_probs=68.3
Q ss_pred ecceEEEecCCcEEEEEEEccCCC----CEEEEEecCCC-----eE-EE-ecceEE-----cCCCCEEEEEe-CCCCcEE
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVK----VRVSWVRRRDW-----HI-LT-SGVLTY-----TNDARFQVIHT-DGSDDWN 74 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~----~~V~W~k~~~~-----~~-l~-~~~~~~-----~~~~R~~~~~~-~~~~~~~ 74 (113)
....+++.+|++|+|+|.+...+. ..|.|+|+... .. +. .+.... ...+|+.+..+ ...++++
T Consensus 11 ~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~s 90 (126)
T 1eaj_A 11 PEEMIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPADNQKVDQVIILYSGDKIYDDYYPDLKGRVHFTSNDLKSGDAS 90 (126)
T ss_dssp SEEEEEEETTSCEEECCBEECCTTCCSCEEEEEEEEETTSSCCSEEEEEEETTEEECTTSSTTTTTEEECCSCGGGTBCC
T ss_pred CCceEEEEeCCCEEEEEEEecCCCCCCceEEEEEEeCCCcCCCceEEEEEeCCeeccccCccccCeeEEEcccccCCeEE
Confidence 345688999999999999986543 46999998632 22 22 222221 12468887532 2345689
Q ss_pred EEEccCCCCCCEEEEEeecCC-CCeeEEEEeceec
Q psy14080 75 LQIKFLQKRDNGTYECQAQPY-TTTSHSQNAPGLG 108 (113)
Q Consensus 75 L~I~~v~~~D~G~Y~C~~~~~-~~~s~~~~L~V~g 108 (113)
|+|++++.+|+|.|+|.+... ...+..++|.|..
T Consensus 91 L~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~L~V~~ 125 (126)
T 1eaj_A 91 INVTNLQLSDIGTYQCKVKKAPGVANKKIHLVVLV 125 (126)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEECcCChHHCeEEEEEEEcCCccCCcEEEEEEEc
Confidence 999999999999999999644 4557788888864
No 144
>1pd6_A Cardiac MYBP-C;, myosin-binding protein C, cardiac-type, domain C2; IG domain, structural protein; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.68 E-value=3.9e-16 Score=97.19 Aligned_cols=91 Identities=9% Similarity=0.041 Sum_probs=68.3
Q ss_pred cCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCC-CCEEEEEeCCCCcEEEEEccCC
Q psy14080 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTND-ARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 3 ~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~-~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
..|+.++......+++.+|++++|.|.+ ..+.+.|.|||.. ..+. .+ .||.+.. +++..+|.|.+++
T Consensus 13 ~~~p~f~~~~~~~~~v~~G~~v~L~C~~-~~p~~~v~W~k~g--~~l~-------~~~~~~~~~~--~~~~~~L~I~~v~ 80 (104)
T 1pd6_A 13 KKSTAFQKKLEPAYQVSKGHKIRLTVEL-ADHDAEVKWLKNG--QEIQ-------MSGSKYIFES--IGAKRTLTISQCS 80 (104)
T ss_dssp STTSSCSEECCSEEEEETTSCEEEEEEC-SSSSSCCEEEESS--SEEC-------CCSSSSEEEE--ETTEEEEEECSCS
T ss_pred cCCCEEEEcCCCcEEEecCCCEEEEEEE-cCCCCEEEEEECC--EECC-------CCCCeEEEEe--cCCEEEEEECCCC
Confidence 4566677777777899999999999999 4677789999843 2332 23 6888763 2346799999999
Q ss_pred CCCCEEEEEeecCCCCeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~~~s~~~~L~V~g 108 (113)
.+|+|.|+|.+. ..+..+.|.|.+
T Consensus 81 ~~D~G~Y~C~a~---~~~~~~~l~V~e 104 (104)
T 1pd6_A 81 LADDAAYQCVVG---GEKCSTELFVKE 104 (104)
T ss_dssp SSSCEEEEEEET---TEEECCEEEEEC
T ss_pred cccCEEEEEEEC---CCcEEEEEEEeC
Confidence 999999999993 244556777753
No 145
>2yz1_A Tyrosine-protein phosphatase non-receptor type substrate 1; beta-sandwich, structural genomics, NPPSFA; 1.40A {Mus musculus}
Probab=99.68 E-value=9.7e-17 Score=101.49 Aligned_cols=84 Identities=15% Similarity=0.133 Sum_probs=59.6
Q ss_pred EeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCCC--eEEEecceEEcCCCCEEEEEe---CCCCcEEEEEccCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDW--HILTSGVLTYTNDARFQVIHT---DGSDDWNLQIKFLQKR 83 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~--~~l~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~~~ 83 (113)
++....+++.+|++|+|+|.+.+. +.+.|.|||+.+. .++..... ...+|+....+ ..++.++|+|++++++
T Consensus 11 ~q~p~~~~~~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~--~~~~r~~~~~~~~~~~~~~~~L~I~~v~~~ 88 (120)
T 2yz1_A 11 TQPEKSVSVAAGDSTVLNCTLTSLLPVGPIKWYRGVGQSRLLIYSFTG--EHFPRVTNVSDATKRNNMDFSIRISNVTPE 88 (120)
T ss_dssp ECCSSEEEECTTCCEEECCEESCCCSCCCEEEEESSSTTCEEEEEECE--ECTTTCCSEEECCBSSTTBCCEEECSCCGG
T ss_pred ECCCceEEEeCCCCEEEEeEECCCCCCcEEEEEcCCCCCcEEEEEcCC--cccCcccceeeccccCCCeEEEEECCCCHH
Confidence 344567899999999999999865 4578999998632 23332111 12356654322 2355689999999999
Q ss_pred CCEEEEEeecCC
Q psy14080 84 DNGTYECQAQPY 95 (113)
Q Consensus 84 D~G~Y~C~~~~~ 95 (113)
|+|+|+|++...
T Consensus 89 DsG~Y~C~~~~~ 100 (120)
T 2yz1_A 89 DAGTYYCVKFQK 100 (120)
T ss_dssp GCEEEEEEEEEC
T ss_pred HCEEEEEEEEcC
Confidence 999999999643
No 146
>2d9c_A Signal-regulatory protein beta-1; beta-sandwich, SIRP-beta-1, CD172B antigen, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=9.6e-17 Score=103.77 Aligned_cols=99 Identities=10% Similarity=0.085 Sum_probs=67.3
Q ss_pred eEeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCCC--eEEEecceEEcCCCCEEEEEe---CCCCcEEEEEccCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDW--HILTSGVLTYTNDARFQVIHT---DGSDDWNLQIKFLQK 82 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~--~~l~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~~ 82 (113)
.++....+++.+|++|+|+|.+.+. +.+.|.|||+.+. .++..... ...+||....+ .+...++|+|.+++.
T Consensus 11 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~r~~~~~~~~i~~~~~--~~~~r~~~~~~~~~~~~~~~~L~I~~v~~ 88 (136)
T 2d9c_A 11 VIQPEKSVSVAAGESATLRCAMTSLIPVGPIMWFRGAGAGRELIYNQKE--GHFPRVTTVSELTKRNNLDFSISISNITP 88 (136)
T ss_dssp EECCCSEEEEETTSCEEECCEESCCCSCCCCEEEETTTSSCEEEEESSS--CCCSSBCCSSCSSSSSCCBCCEEESSCCT
T ss_pred EEecCcEEEEcCCCCEEEEEEEcCCCCCceEEEEeecCCCeEEEEEcCC--CcccceeeeeeeccCCCCEEEEEECCCCH
Confidence 3445567899999999999999865 4568999998632 23332111 11257664321 123478999999999
Q ss_pred CCCEEEEEeecCCC---Cee----EEEEeceecc
Q psy14080 83 RDNGTYECQAQPYT---TTS----HSQNAPGLGD 109 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~---~~s----~~~~L~V~g~ 109 (113)
+|+|+|+|++.... ... ..+.|.|.+.
T Consensus 89 ~DsG~Y~C~~~~~~~~~~~~~~~g~~t~L~V~~~ 122 (136)
T 2d9c_A 89 ADAGTYYCVKFRKGSPDDVEFKSGAGTELSVRAK 122 (136)
T ss_dssp TTCEEEEEEEEECCSSSCEEEEECCCEEEEEECC
T ss_pred HHCEEEEEEEEeCCCCcccceeeCCCeEEEEEeC
Confidence 99999999995422 112 4578888764
No 147
>2yuv_A Myosin-binding protein C, SLOW-type; SLOW-type myosin-binding protein C, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2yxm_A
Probab=99.68 E-value=4.9e-16 Score=95.22 Aligned_cols=90 Identities=12% Similarity=0.009 Sum_probs=69.1
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+.......+++.+|++++|.|.+. .+.+.|.|||.. .. + ..+.||.+.. +....+|.|.+++.+|
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~-~p~~~v~W~k~g-~~-i-------~~~~~~~~~~--~~~~~~L~I~~~~~~D 74 (100)
T 2yuv_A 7 GAAFAKILDPAYQVDKGGRVRFVVELA-DPKLEVKWYKNG-QE-I-------RPSTKYIFEH--KGCQRILFINNCQMTD 74 (100)
T ss_dssp SCCEEECCCSCEEECTTEEEEEEEEES-CTTSCEEEEESS-CB-C-------CCBTTEEEEE--ETTEEEEEEEEECTTT
T ss_pred CCeEEecCCCccEEcCCCcEEEEEEec-CCCceEEEEECC-EE-C-------CCCCCEEEEe--cCCEEEEEEcCCCcCc
Confidence 555655555557899999999999999 578899999853 21 1 2356888763 3456799999999999
Q ss_pred CEEEEEeecCCCCeeEEEEeceecc
Q psy14080 85 NGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+ +..+..+.|.|.+.
T Consensus 75 ~G~Y~C~a---g~~~~~~~l~V~~~ 96 (100)
T 2yuv_A 75 DSEYYVTA---GDEKCSTELFVRSG 96 (100)
T ss_dssp CCEEEEEE---TTEEEEEEEEECCS
T ss_pred CEEEEEEE---CCceEEEEEEEecC
Confidence 99999999 55677788888764
No 148
>3v0a_C Llama antibody F12; botulinum neurotoxin, toxin, neurotoxin associated protein, progenitor toxin complex, VHH bound interlocked complex; HET: MES; 2.70A {Lama glama}
Probab=99.68 E-value=1.5e-16 Score=105.69 Aligned_cols=95 Identities=16% Similarity=0.124 Sum_probs=65.9
Q ss_pred eEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Ee-cc-eE-E--cCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 15 ISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TS-GV-LT-Y--TNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~-~~-~~-~--~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.+++.+|++|+|+|.+++. ....++||||..+ ..| .. .. .. . ...+||.+..+...+.++|+|++++.+
T Consensus 18 ~~~v~~G~~vtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~~~~~ 97 (152)
T 3v0a_C 18 GGLVQPGGSLRLSCAASGFTLGSRYMSWVRQAPGEGFEWVSSIEPSGTAWDGDSAKGRFTTSRDDAKNTLYLQMSNLQPE 97 (152)
T ss_dssp CCBCSSCSEEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECSTTTTTCEEEEETTTTEEEEEEESCCGG
T ss_pred CEEEccCCCEEEEEEecCCCccCCeEEEEEECCCCCCEEEEEEeCCCcEecCCcccCcEEEEecCCCCEEEEEECCCCcc
Confidence 4679999999999999764 2468999999742 233 22 11 11 1 235899998766667899999999999
Q ss_pred CCEEEEEeecCC-------CCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQPY-------TTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~~-------~~~s~~~~L~V~g~ 109 (113)
|+|+|+|++... ...-....|.|.++
T Consensus 98 Dsg~Y~C~~~~~~~~~~~~~~fG~GT~L~V~~~ 130 (152)
T 3v0a_C 98 DTGVYYCATGYRTDTRIPGGSWGQGTQVTVSSE 130 (152)
T ss_dssp GCEEEEEESSSSCCSCCTTCCBCCCCEEBC---
T ss_pred cCEEEEEEEccCCCccccccEECCCEEEEEeCC
Confidence 999999999642 12233456666665
No 149
>3lh2_H FV 4E10 heavy chain; epitope-scaffold, immune system; 2.65A {Homo sapiens} PDB: 3h3p_H 3lhp_H 2xtj_D
Probab=99.68 E-value=1e-15 Score=100.34 Aligned_cols=85 Identities=15% Similarity=0.179 Sum_probs=63.1
Q ss_pred eEeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Ee---cc-eEEc--CCCCEEEEEeCCCCcEEEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TS---GV-LTYT--NDARFQVIHTDGSDDWNLQ 76 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~---~~-~~~~--~~~R~~~~~~~~~~~~~L~ 76 (113)
+++.+..+ +.+|++|+|+|.+++. ....|.||||.+ +..| .. +. .... ..+||.+..+..++.++|+
T Consensus 6 v~Q~p~~~-v~~G~sVtL~C~~s~~~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sLt 84 (137)
T 3lh2_H 6 LVQSGAEV-KRPGSSVTVSCKASGGSFSTYALSWVRQAPGRGLEWMGGVIPLLTITNYAPRFQGRITITADRSTSTAYLE 84 (137)
T ss_dssp EEECCCEE-ECSSCCEEEEEEEESSCSTTSCEEEEEECTTCCCEEEEEEEGGGTEEEECTTTTTTEEEEEETTTTEEEEE
T ss_pred EEECCCEE-EcCCCCEEEEEEecCCcccccEEEEEEECCCCCCEEEEEEEcCCCccccCcccCCcEEEEecCCCCEEEEE
Confidence 34555555 9999999999999853 246899999974 2333 32 11 1121 2579999876677899999
Q ss_pred EccCCCCCCEEEEEeecC
Q psy14080 77 IKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 77 I~~v~~~D~G~Y~C~~~~ 94 (113)
|++++++|+|+|+|++..
T Consensus 85 I~~lq~~Dsg~Y~C~~~~ 102 (137)
T 3lh2_H 85 LNSLRPEDTAVYYCAREG 102 (137)
T ss_dssp ECSCCGGGCEEEEEEEEE
T ss_pred ECCCChhhCEEEEEEEEE
Confidence 999999999999999964
No 150
>3qyc_A VH domain of IGG molecule; immunoglobulin V domain fold, antibody, immune system; 1.60A {Homo sapiens} PDB: 1ieh_A 1ohq_A 2uzi_H*
Probab=99.68 E-value=2.9e-16 Score=103.98 Aligned_cols=84 Identities=18% Similarity=0.224 Sum_probs=62.1
Q ss_pred EeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eec---ceE-E--cCCCCEEEEEeCCCCcEEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSG---VLT-Y--TNDARFQVIHTDGSDDWNLQI 77 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~---~~~-~--~~~~R~~~~~~~~~~~~~L~I 77 (113)
++.+ .+++.+|++|+|+|.++.. ....+.||||.++ ..| ... ... . ...+||.+..+...+.++|+|
T Consensus 7 ~Q~~-~~~v~~G~svtL~C~~s~~~~~~~~v~WyrQ~~g~~~~~L~~~~~~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I 85 (146)
T 3qyc_A 7 VESG-GGLIKPGGSLRLSCAASGVRLSAYDMAWVRQAPGKGLEWVSAISSSGGSTYYADSVKGRFTISRDNSKNTVYLQM 85 (146)
T ss_dssp EEEC-CEEECTTCCEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEE
T ss_pred EeeC-CEEECCCCCEEEEEEeeCCCcCCCEEEEEEECCCCCcEEEEEEEcCCCceecCcccCCcEEEEecCCCCEEEEEE
Confidence 3444 4689999999999999864 2467999999742 333 221 111 1 135899998665567899999
Q ss_pred ccCCCCCCEEEEEeecC
Q psy14080 78 KFLQKRDNGTYECQAQP 94 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~ 94 (113)
.+++++|+|+|+|++..
T Consensus 86 ~~lq~~Dsg~YyCa~~~ 102 (146)
T 3qyc_A 86 NSLRAEDTAVYYCVTLP 102 (146)
T ss_dssp CSCCGGGCEEEEEEECC
T ss_pred CCCCHHhCEEEEEEEec
Confidence 99999999999999964
No 151
>2e7c_A Myosin-binding protein C, fast-type; IG-like domain, fast MYBP-C, C-protein, skeletal muscle fast-isoform, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.68 E-value=5.3e-16 Score=97.67 Aligned_cols=86 Identities=13% Similarity=0.104 Sum_probs=68.4
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
....+++.+|+++.|.|.+.+.+.+.|.|+|.. ..+ ...|+.+.. .....+|.|.+++.+|+|.|.|.
T Consensus 30 ~~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~g--~~l--------~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C~ 97 (118)
T 2e7c_A 30 LRQTYIRKVGEQLNLVVPFQGKPRPQVVWTKGG--APL--------DTSRVHVRT--SDFDTVFFVRQAARSDSGEYELS 97 (118)
T ss_dssp TSSCEEEESSSCEEEEEEEEEESCCEEEEEETT--EEC--------CCSSCEEEE--CSSEEEEEESSCCTTTCEEEEEE
T ss_pred cCCCEEEECCCEEEEEEEEccCCCCEEEEEECC--EEC--------CCCcEEEEE--CCCeEEEEECCCChhcCEEEEEE
Confidence 356789999999999999999999999999842 222 135666552 34567899999999999999999
Q ss_pred e-cCCCCeeEEEEeceecc
Q psy14080 92 A-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 92 ~-~~~~~~s~~~~L~V~g~ 109 (113)
+ +..+..+..+.|.|.+.
T Consensus 98 a~N~~G~~~~~~~l~V~~~ 116 (118)
T 2e7c_A 98 VQIENMKDTATIRIRVVEK 116 (118)
T ss_dssp EECSSCEECCEEEEEEECC
T ss_pred EEeCCCeEEEEEEEEEEcC
Confidence 9 45677788889988763
No 152
>3nn8_A Engineered SCFV, heavy chain; beta barrel, antibody fragment, immunoglobulin, immune syste; 3.10A {Mus musculus}
Probab=99.68 E-value=7.3e-16 Score=98.55 Aligned_cols=82 Identities=13% Similarity=0.133 Sum_probs=61.0
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEE--EEEecCCC---eEE-Ee--cc-eEE--cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRV--SWVRRRDW---HIL-TS--GV-LTY--TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V--~W~k~~~~---~~l-~~--~~-~~~--~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
+..+++.+|++|+|+|.++.. ....+ .|||+.++ ..| .. +. ... ...+||.+..+..++.++|+|.+
T Consensus 7 ~~~~~v~~G~~vtL~C~~s~~~~~~~~~~~~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~ 86 (122)
T 3nn8_A 7 SGPEDVKPGASVKISCKASGYSLSTSGMGVNWVKQSPGKGLEWLAHIYWDDDKRYNPSLKSRATLTVDKTSSTVYLELRS 86 (122)
T ss_dssp CCCEEECTTCCEEEEEEEESSCTTSTTCEEEEEEEETTEEEEEEEEEETTCCEEECGGGTTCEEEEEETTTTEEEEEECS
T ss_pred CCCeEEeCCCcEEEEEEEECCCccCceEEeEEEEeCCCCCcEEEEEEEcCCCeecCccccCCEEEEEeCCCCEEEEEECC
Confidence 445789999999999999763 23456 99999743 222 11 11 111 12589999876667889999999
Q ss_pred CCCCCCEEEEEeecC
Q psy14080 80 LQKRDNGTYECQAQP 94 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~ 94 (113)
++++|+|+|+|++..
T Consensus 87 ~~~~Dsg~Y~C~~~~ 101 (122)
T 3nn8_A 87 LTSEDSSVYYCARRG 101 (122)
T ss_dssp CCGGGCEEEEEEEEC
T ss_pred CChhhCEEEEEEEEe
Confidence 999999999999965
No 153
>2k1m_A Myosin-binding protein C, cardiac-type; IG-I domain, cardiac muscle, hypertrophic cardiomyopathy, actin-binding, cell adhesion, disease mutation; NMR {Homo sapiens}
Probab=99.68 E-value=4e-16 Score=94.92 Aligned_cols=84 Identities=11% Similarity=0.152 Sum_probs=64.8
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
.....++++.+|++++|.|.+ +.+.+.|.|||.. ..+ ..++||.+.. +....+|.|.+++.+|+|.|+
T Consensus 12 ~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~--~~l-------~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~ 79 (95)
T 2k1m_A 12 SKKPRSVEVAAGSPAVFEAET-ERAGVKVRWQRGG--SDI-------SASNKYGLAT--EGTRHTLTVREVGPADQGSYA 79 (95)
T ss_dssp SBCCCCEEEETTSCEEEEEEC-SSSSCCCEEECSS--SEE-------CSSTTCEEEE--ETTEEEEEESSCCTTCCSEEE
T ss_pred EeCCCcEEEeCCCcEEEEEEe-CCCCCeEEEEECC--EEC-------CCCCcEEEEE--cCCEEEEEEcCCCcccCEEEE
Confidence 344567899999999999999 5677899999842 222 2456888764 234679999999999999999
Q ss_pred EeecCCCCeeEEEEeceec
Q psy14080 90 CQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 90 C~~~~~~~~s~~~~L~V~g 108 (113)
|.+ +..+..+.|.|.+
T Consensus 80 C~a---g~~~~~~~l~V~e 95 (95)
T 2k1m_A 80 VIA---GSSKVKFDLKVIE 95 (95)
T ss_dssp EEE---TTEEEEEEEEEEC
T ss_pred EEE---CCceEEEEEEEeC
Confidence 999 4456678888863
No 154
>2lvc_A Obscurin-like protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, structural prote; NMR {Homo sapiens}
Probab=99.68 E-value=1.2e-16 Score=97.77 Aligned_cols=88 Identities=13% Similarity=0.129 Sum_probs=65.0
Q ss_pred CCceeeEeecc-eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 4 APGGILTAFGQ-ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 4 ~p~~i~~~~~~-~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
+|+.|...... .+.+.+|++++|.|.+++ +.+.|.|||.+ ..+ ..++||.+.. +++..+|.|.+++.
T Consensus 3 ~P~~i~~p~~~~~v~~~~g~~v~l~C~v~~-p~~~v~W~k~g--~~i-------~~~~~~~i~~--~~~~~~L~I~~v~~ 70 (91)
T 2lvc_A 3 MPVHIVDPREHVFVHAITSECVMLACEVDR-EDAPVRWYKDG--QEV-------EESDFVVLEN--EGPHRRLVLPATQP 70 (91)
T ss_dssp CCCCCCBCCSCEEEECCTTCCEEEEEECSC-TTSCCEEEETT--SCC-------CCCSSCEEEE--ETTEEEEEESSCCG
T ss_pred CCcEEeccCCCeEEEEECCCcEEEEEEECC-CCcEEEEEECC--EEe-------eeeeeeeEEe--cCCeEEEEeCCCCh
Confidence 57777765432 356778999999999976 67889999842 222 2467888764 34567999999999
Q ss_pred CCCEEEEEeecCCCCeeEEEEece
Q psy14080 83 RDNGTYECQAQPYTTTSHSQNAPG 106 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~~~s~~~~L~V 106 (113)
+|+|.|.|.+.. .+..++|.|
T Consensus 71 ~D~G~Y~C~a~n---~~~~~~ltV 91 (91)
T 2lvc_A 71 SDGGEFQCVAGD---ECAYFTVTI 91 (91)
T ss_dssp GGCSEEEEECSS---CEEEEEEEC
T ss_pred hhcEEEEEEEcc---eEEEEEEEC
Confidence 999999999843 355566665
No 155
>2edj_A Roundabout homolog 2; KIAA1568 protein, beta sandwich, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=4.1e-16 Score=95.22 Aligned_cols=91 Identities=24% Similarity=0.193 Sum_probs=69.9
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+. .....+++.+|++++|.|.+.+.+.+.|.|+|.. ..+. ..+.|+.+. .+.+|.|.+++.+|
T Consensus 8 ~P~i~-~~p~~~~v~~G~~~~l~C~~~g~p~p~v~W~~~~--~~~~------~~~~~~~~~-----~~~~L~i~~v~~~d 73 (100)
T 2edj_A 8 PPIIL-QGPANQTLAVDGTALLKCKATGDPLPVISWLKEG--FTFP------GRDPRATIQ-----EQGTLQIKNLRISD 73 (100)
T ss_dssp SCEEE-ECCCCEEEESSSEEEECCEEECSSCCEEEEEESS--SEES------SSCSSCEEC-----TTCCEEEESCCTTT
T ss_pred CCEEE-eCcCCEEEcCCCcEEEEEEEEEcCCCEEEEEECC--EECC------CCCCCEEEc-----CCCEEEEccCCccc
Confidence 44444 4456788999999999999999888999999843 2221 135677654 24489999999999
Q ss_pred CEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 85 NGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+. ..+..+..+.|.|.+.
T Consensus 74 ~G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (100)
T 2edj_A 74 TGTYTCVATSSSGETSWSAVLDVTES 99 (100)
T ss_dssp CCEEEEEEECSSCCCBCCEEEEEESC
T ss_pred CEEEEEEEEcCCCCEEEEEEEEEecC
Confidence 999999994 5567778888988764
No 156
>3m8o_H Immunoglobulin A1 heavy chain; immunoglobulin fold, immune system; 1.55A {Homo sapiens} PDB: 3qnx_B 3qny_B
Probab=99.67 E-value=4.8e-16 Score=106.63 Aligned_cols=97 Identities=13% Similarity=0.075 Sum_probs=68.8
Q ss_pred eecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eecc-----e-EE--cCCCCEEEEEeCCCCcEEEE
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSGV-----L-TY--TNDARFQVIHTDGSDDWNLQ 76 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~~-----~-~~--~~~~R~~~~~~~~~~~~~L~ 76 (113)
.....+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ .... . .. ...+||.+..+...+.++|+
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~ 84 (221)
T 3m8o_H 5 VESGGGLVQPGGSLKLSCAASGFTLSGSNVHWVRQASGKGLEWVGRIKRNAESDATAYAASMRGRLTISRDDSKNTAFLQ 84 (221)
T ss_dssp EEESCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECCGGGTTCEEECGGGTTSEEEEEEGGGTEEEEE
T ss_pred EccCCEEEcCCCCEEEEEEcccccccccEEEEEEECCCCCcEEEEEEcccccCcccccCccccccEEEEecCCCCEEEEE
Confidence 344567899999999999998643 579999998742 222 2111 0 11 12589998865556789999
Q ss_pred EccCCCCCCEEEEEeecCCC---CeeEEEEecee
Q psy14080 77 IKFLQKRDNGTYECQAQPYT---TTSHSQNAPGL 107 (113)
Q Consensus 77 I~~v~~~D~G~Y~C~~~~~~---~~s~~~~L~V~ 107 (113)
|++++.+|+|.|+|.+.... .....+.|.|.
T Consensus 85 I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~l~V~ 118 (221)
T 3m8o_H 85 MNSLKSDDTAMYYCVIRGDVYNRQWGQGTLVTVS 118 (221)
T ss_dssp ECSCCGGGCEEEEEEEESCTTCCCBBCCEEEEEC
T ss_pred ECCCCHHHCEEEEEEEECCChhheECCCEEEEEe
Confidence 99999999999999996532 23444566665
No 157
>1nct_A Titin; cell adhesion, glycoprotein, transmembrane, repeat, brain, immunoglobulin fold, alternative splicing, signal, muscle protein; NMR {Homo sapiens} SCOP: b.1.1.4 PDB: 1ncu_A 1tnm_A 1tnn_A
Probab=99.67 E-value=1.8e-16 Score=98.70 Aligned_cols=91 Identities=18% Similarity=0.169 Sum_probs=71.0
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+. ....++++.+|+++.|.|.+.+.+.+.|.|+|... .+ ..+.|+.+.. .....+|.|.+++.+|
T Consensus 14 ~~~i~-~~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~g~--~l-------~~~~~~~~~~--~~~~~~L~I~~v~~~D 81 (106)
T 1nct_A 14 AARIL-TKPRSMTVYEGESARFSCDTDGEPVPTVTWLRKGQ--VL-------STSARHQVTT--TKYKSTFEISSVQASD 81 (106)
T ss_dssp CCEEE-ECCCCEEESSSSCEECCEEEECSSCCBCCBCSSSS--CC-------TTCSSEEEEE--CSSEEEEEECCCCSSC
T ss_pred CCEEE-ECCCCEEEeCCCcEEEEEEEEEcCCCEEEEEECCE--EC-------CCCCCEEEEE--CCCEEEEEECcCCchh
Confidence 34443 34567899999999999999998889999998431 11 2467888763 3457899999999999
Q ss_pred CEEEEEeec-CCCCeeEEEEecee
Q psy14080 85 NGTYECQAQ-PYTTTSHSQNAPGL 107 (113)
Q Consensus 85 ~G~Y~C~~~-~~~~~s~~~~L~V~ 107 (113)
+|.|+|.+. ..+..+..+.|.|.
T Consensus 82 ~G~Y~C~a~N~~G~~~~~~~l~V~ 105 (106)
T 1nct_A 82 EGNYSVVVENSEGKQEAEFTLTIQ 105 (106)
T ss_dssp CSEEEECCBCSSCBCCEEEEEEEC
T ss_pred CEEEEEEEEeCCCeEEEEEEEEEE
Confidence 999999994 55777888888875
No 158
>1hxm_A Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.67 E-value=7.3e-16 Score=108.06 Aligned_cols=100 Identities=15% Similarity=0.120 Sum_probs=72.4
Q ss_pred eEeecceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEEEecceEEc--CCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHILTSGVLTYT--NDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l~~~~~~~~--~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
.++....+++.+|++|+|+|.+++.+ ...|.|||+.. ...+........ .++||.+..+...+.++|+|++++
T Consensus 4 v~q~p~~v~v~~G~~vtL~C~~s~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 83 (229)
T 1hxm_A 4 LVPEHQTVPVSIGVPATLRCSMKGEAIGNYYINWYRKTQGNTMTFIYREKDIYGPGFKDNFQGDIDIAKNLAVLKILAPS 83 (229)
T ss_dssp EEESCSEEEEETTCCEEEEEEECSSCGGGSEEEEEEEESSSCSEEEEETTTEECTTTTTTEEEEEEGGGTEEEEEESSCC
T ss_pred cEeCCCEEEEcCCCCEEEEeEecCCccCcceEEEEEECCCCCcEEEEEcCCccCCCcCCeEEEEEcCCCCEEEEEECcCC
Confidence 34556778999999999999998543 46899999863 234433322221 258999986555678999999999
Q ss_pred CCCCEEEEEeecCCC---------CeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPYT---------TTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~---------~~s~~~~L~V~g 108 (113)
.+|+|+|+|++.... .......|.|.+
T Consensus 84 ~~Dsg~Y~C~~~~~~~~~~~~~~~~~g~gt~L~V~~ 119 (229)
T 1hxm_A 84 ERDEGSYYCACDTLGMGGEYTDKLIFGKGTRVTVEP 119 (229)
T ss_dssp GGGCEEEEEEEECCCCSSSCCCCCEEBCCEEEEEEC
T ss_pred HhHCeEEEEEEecCCCcccccchhhcCccEEEEEec
Confidence 999999999996431 122345777775
No 159
>2kkq_A Myotilin; unknown function, actin-binding, cell membrane, cytoplasm, cytoskeleton, disease mutation, immunoglobulin domain; NMR {Homo sapiens}
Probab=99.67 E-value=4.9e-16 Score=98.11 Aligned_cols=89 Identities=17% Similarity=0.163 Sum_probs=70.3
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
..+++++.+|++++|.|.+.+.+.+.|.|+|.. ..+. ..+.|+.+..+ ..+.++|.|.+++.+|+|.|+|.
T Consensus 21 ~p~~~~v~~G~~v~L~C~~~g~p~p~v~W~k~~--~~~~------~~~~~~~~~~~-~~~~~~L~I~~v~~~D~G~Y~C~ 91 (116)
T 2kkq_A 21 KPQSKKVLEGDSVKLECQISAIPPPKLFWKRNN--EMVQ------FNTDRISLYQD-NTGRVTLLIKDVNKKDAGWYTVS 91 (116)
T ss_dssp CCCCEEEETTEEEEEEEEBCCBSCCEEEEEETT--EECC------CCBTTEEEEEC-TTCEEEEEEEEECGGGCEEEEEE
T ss_pred CCCcEEEeCCCcEEEEEEEeccCCCEEEEEECC--EECc------CCCCeEEEEeC-CCCeEEEEECCCCcccCEEEEEE
Confidence 345679999999999999999888999999843 2221 12578887642 33566999999999999999999
Q ss_pred e-cCCCCeeEEEEeceecc
Q psy14080 92 A-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 92 ~-~~~~~~s~~~~L~V~g~ 109 (113)
+ +..+..+..+.|.|.+.
T Consensus 92 a~N~~G~~~~~~~l~V~~~ 110 (116)
T 2kkq_A 92 AVNEAGVTTCNTRLDVTAR 110 (116)
T ss_dssp EEETTEEEEEEEEEEEECC
T ss_pred EEcCCCeEEEEEEEEEeCC
Confidence 9 45677788899998764
No 160
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.67 E-value=4.5e-16 Score=109.03 Aligned_cols=106 Identities=8% Similarity=0.036 Sum_probs=75.0
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---e-EEEec-c--e-EE--cCCCCEEEEEeCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---H-ILTSG-V--L-TY--TNDARFQVIHTDGSD 71 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~-~l~~~-~--~-~~--~~~~R~~~~~~~~~~ 71 (113)
.|..........+++.+|++|+|+|.+.+. +.+.|.|||+.+. . ++... . . .. ...+||.+..+...+
T Consensus 4 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~ 83 (256)
T 3juy_B 4 HHHQVQLVQSGAEVKKPGASVKVSCQASGYRFSHFTVHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSAN 83 (256)
T ss_dssp ---CCEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTT
T ss_pred ccceEEEEecCCceecCCCeEEEEEEeecccccCceEEEEEECCCCCcEEEEEEEcCCCcEeecccCcceEEEEEecCCC
Confidence 355566677778999999999999999873 5678999998632 2 22222 1 0 11 124799998766677
Q ss_pred cEEEEEccCCCCCCEEEEEeecCC-------------CCeeEEEEeceecc
Q psy14080 72 DWNLQIKFLQKRDNGTYECQAQPY-------------TTTSHSQNAPGLGD 109 (113)
Q Consensus 72 ~~~L~I~~v~~~D~G~Y~C~~~~~-------------~~~s~~~~L~V~g~ 109 (113)
.++|+|++++++|+|.|+|++... ......+.|.|.+.
T Consensus 84 ~~~L~I~~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~~~~~~~~~l~V~~~ 134 (256)
T 3juy_B 84 TAYMELRSLRSADTAVYYCARVGEWGWDDSPYDNYYMDVWGKGTTVIVSSG 134 (256)
T ss_dssp EEEEEECSCCGGGCEEEEEEECCCCCTTCCTTTTCSCCEECCCEEEEECSC
T ss_pred EEEEEECCCCcccCEEEEEeEEeccccccccccccceeEECCceEEeecCC
Confidence 899999999999999999999653 22344566777653
No 161
>1wit_A Twitchin 18TH IGSF module; immunoglobulin superfamily, I SET, muscle protein; NMR {Caenorhabditis elegans} SCOP: b.1.1.4 PDB: 1wiu_A
Probab=99.67 E-value=2.8e-16 Score=95.04 Aligned_cols=91 Identities=12% Similarity=0.030 Sum_probs=67.4
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+... ..++++.+|+++.|.|.+.+.+.+.|.|+|...+..+ +.++.... .....+|.|.+++.+|
T Consensus 2 ~P~i~~~-~~~~~v~~G~~~~l~C~~~g~P~p~i~W~k~~~~~~~---------~~~~~~~~--~~~~~~L~i~~~~~~D 69 (93)
T 1wit_A 2 KPKILTA-SRKIKIKAGFTHNLEVDFIGAPDPTATWTVGDSGAAL---------APELLVDA--KSSTTSIFFPSAKRAD 69 (93)
T ss_dssp CCEECCC-CCEEEECTTBCCEEEEEEECCSSCEEEEECSTTTCBC---------STTSEEEE--ETTEEEEECTTBCGGG
T ss_pred CCeEEcC-CCceEEeCCCEEEEEEEEEEcCCCEEEEEECCCCccc---------CCcEEEEe--cCCEEEEEECCCChhc
Confidence 5556444 4578999999999999999999999999985411222 11222221 1346799999999999
Q ss_pred CEEEEEee-cCCCCeeEEEEecee
Q psy14080 85 NGTYECQA-QPYTTTSHSQNAPGL 107 (113)
Q Consensus 85 ~G~Y~C~~-~~~~~~s~~~~L~V~ 107 (113)
+|.|.|.+ +..+..+..+.|.|.
T Consensus 70 ~G~Y~C~a~N~~G~~~~~~~l~V~ 93 (93)
T 1wit_A 70 SGNYKLKVKNELGEDEAIFEVIVQ 93 (93)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEC
T ss_pred CEEEEEEEEcCCCeEEEEEEEEEC
Confidence 99999999 556777888888773
No 162
>2edf_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.67 E-value=4.4e-16 Score=95.66 Aligned_cols=90 Identities=11% Similarity=0.094 Sum_probs=68.3
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++..+.....++++.+|++++|.|.+.+ +.+.|.|||.. . .+ ..+.||.+..+ ....+|.|.+++.+|
T Consensus 7 ~pp~~~~~~~~~~v~~G~~v~l~C~~~~-~~~~v~W~k~g-~-~~-------~~~~~~~~~~~--~~~~~L~I~~v~~~D 74 (103)
T 2edf_A 7 GPAAIIKPLEDQWVAPGEDVELRCELSR-AGTPVHWLKDR-K-AI-------RKSQKYDVVCE--GTMAMLVIRGASLKD 74 (103)
T ss_dssp CCCCEEECCCCEEECTTSCEEECCEESS-SSCCCCEEESS-C-BC-------CCSSSEEEEEE--TTEEEEEESSCCTTT
T ss_pred CCcEEEecCCccEEcCCCCEEEEEEEeC-CCCcEEEEECC-E-Ec-------cCCCCEEEEEC--CCEEEEEECCCCccc
Confidence 3344444556689999999999999997 66789999843 2 11 23568887642 346799999999999
Q ss_pred CEEEEEeecCCCCeeEEEEeceecc
Q psy14080 85 NGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+.. .+..+.|.|.+.
T Consensus 75 ~G~Y~C~a~n---~~~~~~l~V~~~ 96 (103)
T 2edf_A 75 AGEYTCEVEA---SKSTASLHVEEK 96 (103)
T ss_dssp CSEEEEECSS---CEEEEEEEECCC
T ss_pred CEEEEEEEcc---CCcEEEEEEeCC
Confidence 9999999966 466788888764
No 163
>2fbj_H IGA-kappa J539 FAB (heavy chain); immunoglobulin; HET: NAG FUC; 1.95A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mcp_H 2mcp_H*
Probab=99.67 E-value=6.4e-16 Score=106.47 Aligned_cols=96 Identities=14% Similarity=0.124 Sum_probs=68.4
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eecc----eEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSGV----LTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~~----~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ .... ... ..++||.+..+...++++|+|+++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (220)
T 2fbj_H 7 SGGGLVQPGGSLKLSCAASGFDFSKYWMSWVRQAPGKGLEWIGEIHPDSGTINYTPSLKDKFIISRDNAKNSLYLQMSKV 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEECSSSCEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEecCccCCCceEEEEEECCCCCeEEEEEEccCCCceecCCccCCcEEEEeeCCCCEEEEEECCC
Confidence 3558899999999999998754 578999998632 222 2210 111 125799988654567899999999
Q ss_pred CCCCCEEEEEeecCCCC----eeEEEEeceec
Q psy14080 81 QKRDNGTYECQAQPYTT----TSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~~----~s~~~~L~V~g 108 (113)
+.+|+|.|+|++..... ....+.|.|.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 118 (220)
T 2fbj_H 87 RSEDTALYYCARLHYYGYNAYWGQGTLVTVSA 118 (220)
T ss_dssp CGGGCEEEEEEEEETTTEEEEECCCEEEEECS
T ss_pred ChhhCEEEEEEEeccccccceecCCEEEEecC
Confidence 99999999999965432 22345777764
No 164
>3qjh_A 5C.C7 alpha chain; immunoglobulin domain, T cell receptor, immune system; 1.90A {Mus musculus} PDB: 3qiu_C* 3qiw_C* 3qjf_A 3qib_C 2ial_A 2iam_C 2ian_D 4e41_D 4e42_A 3rug_E* 3axl_A
Probab=99.66 E-value=5.3e-16 Score=108.01 Aligned_cols=97 Identities=16% Similarity=0.098 Sum_probs=71.1
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eE-EEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HI-LTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~-l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
++....+++.+|++|+|+|.++.. ...|.|||+.++ .. ++..... ...+||.+..+...+.++|+|++++++|+
T Consensus 7 ~Q~p~~v~v~~G~svtL~C~~s~~-~~~v~Wyrq~~g~~~~~l~~~~~~~-~~~~Rfs~~~~~~~~~~sL~I~~l~~~Ds 84 (205)
T 3qjh_A 7 EQSPSALSLHEGTGSALRCNFTTT-MRAVQWFRKNSRGSLINLFYLASGT-KENGRLKSAFDSKERYSTLHIRDAQLEDS 84 (205)
T ss_dssp EEECSEEEEETTCCEEEEEECSSC-EEEEEEEEEC-CCCEEEEEEESSEE-EEETTEEEEEETTTTEEEEEECSCCGGGC
T ss_pred EEeCCEEEEeCCCCEEEEEEEECC-cceEEEEEECCCCCcEEEEEECCCC-ccCCCEEEEEcCCCCEEEEEEeccccccC
Confidence 455667899999999999999876 568999999732 22 3322222 34689998766778899999999999999
Q ss_pred EEEEEeecC--CC--CeeEEEEeceec
Q psy14080 86 GTYECQAQP--YT--TTSHSQNAPGLG 108 (113)
Q Consensus 86 G~Y~C~~~~--~~--~~s~~~~L~V~g 108 (113)
|+|+|++.. .. .......|.|..
T Consensus 85 G~Y~Cav~~~~~~~~~fG~GT~L~V~~ 111 (205)
T 3qjh_A 85 GTYFCAAEASNTNKVVFGTGTRLQVLP 111 (205)
T ss_dssp EEEEEEEEETTTCCEEEBCCEEEEEEC
T ss_pred eEEEEEEEcCCCCccccCCCEEEEEeC
Confidence 999999962 11 122345666664
No 165
>1ypz_F T-cell receptor gamma chain, beta-2-microglobulin; H2-T22 protein, T cell receptor delta, immune system; HET: NAG MAN FUC; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=3.9e-16 Score=108.43 Aligned_cols=99 Identities=12% Similarity=0.045 Sum_probs=71.2
Q ss_pred eEeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---Ce-EEEecce--EE--c-CCCCEEEEEeCCCCcEEEEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WH-ILTSGVL--TY--T-NDARFQVIHTDGSDDWNLQI 77 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~-~l~~~~~--~~--~-~~~R~~~~~~~~~~~~~L~I 77 (113)
.++....+++.+|++|+|+|.+.+. +.+.|.|||+.. .. +++.... .+ . .++||.+..+...++++|+|
T Consensus 4 v~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 83 (230)
T 1ypz_F 4 LEQPEISISRPRDETAQISCKVFIESFRSVTIHWYRQKPNQGLEFLLYVLATPTHIFLDKEYKKMEASKNPSASTSILTI 83 (230)
T ss_dssp EECSCSEEEEETTSCEEEEEEECCGGGGGCCEEEEEECTTTCCEEEEEECSSCCCEEEESSSSEEEEEECCTTTEEEEEE
T ss_pred ccccCCEEEEeCCCcEEEEEEeeccccCccEEEEEEECCCCCCEEEEEEecCCeeecCcccCCeEEEEEcCCCCEEEEEE
Confidence 3455677899999999999999864 457899999873 22 3332211 11 1 36899988655557899999
Q ss_pred ccCCCCCCEEEEEeecCC---C--CeeEEEEecee
Q psy14080 78 KFLQKRDNGTYECQAQPY---T--TTSHSQNAPGL 107 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~~---~--~~s~~~~L~V~ 107 (113)
++++.+|+|+|+|++... . .....+.|.|.
T Consensus 84 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~L~V~ 118 (230)
T 1ypz_F 84 YSLEEEDEAIYYCSYGEGSSGFHKVFAEGTKLIVI 118 (230)
T ss_dssp CSCCGGGCSEEEEEECCTTTCCCCEECSCEEEEEE
T ss_pred CcCChhhCEEEEEEEECCCCCcccccCCCEEEEEe
Confidence 999999999999999652 2 22334577776
No 166
>3n9g_H FAB fragment of MAB CR4354, heavy chain; human neutralizing antibody, immun anti-WEST NIle virus; 1.43A {Homo sapiens} PDB: 3iyw_H 3qeh_A 3sqo_H 4hk0_A 4hk3_J 4hkx_A* 3u0t_D 3c08_H 3lmj_H 3lqa_H* 3c09_H* 4dn3_H 3pp4_H 3pp3_H 4hkb_J 2jb5_H* 2jb6_B* 2eh7_H 2eh8_H 3jwd_H* ...
Probab=99.66 E-value=6.8e-16 Score=106.97 Aligned_cols=84 Identities=12% Similarity=0.124 Sum_probs=62.6
Q ss_pred ecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---e-EEEecc---e-EE--cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---H-ILTSGV---L-TY--TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~-~l~~~~---~-~~--~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
....+++.+|++|+|+|.+++. ....|.|||+... . ++.... . .. ...+||.+..+...+.++|+|++
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (230)
T 3n9g_H 6 QSGAEVRKPGASTKVSCKASGYTFTHYYMHWVRQAPGQGLEWMGIINPSGGSTTYAQKLQGRVTMTRDTSTSTVYMELSS 85 (230)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEECS
T ss_pred ecCCEEEcCCCCEEEEEEeecceecCcEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECC
Confidence 3446889999999999999753 3568999998742 2 222211 0 11 12579999877777889999999
Q ss_pred CCCCCCEEEEEeecCC
Q psy14080 80 LQKRDNGTYECQAQPY 95 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~ 95 (113)
++.+|+|+|+|++...
T Consensus 86 v~~~DsG~Y~C~~~~~ 101 (230)
T 3n9g_H 86 LRSEDTAVYYCARDWG 101 (230)
T ss_dssp CCGGGCEEEEEEEECC
T ss_pred CChhhCEEEEEEEccC
Confidence 9999999999999653
No 167
>1mju_H Immunoglobulin MS6-12; catalytic antibody, ester hydrolysis, esterolytic, FAB, immune system; 1.22A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1mjj_B 1mie_H 1mj7_H* 1mj8_H 1mh5_B* 4aeh_H 2y5t_A 2vwe_E 2op4_H 2ntf_H 3loh_C 1e4x_H 2vl5_A 1e4x_I 1e4w_H 3opz_H 3oz9_H 1plg_H 1hi6_B 1cfn_B ...
Probab=99.66 E-value=9.3e-16 Score=106.23 Aligned_cols=98 Identities=10% Similarity=0.023 Sum_probs=69.3
Q ss_pred eecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eec----ceEEc--CCCCEEEEEeCCCCcEEEEEc
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSG----VLTYT--NDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~----~~~~~--~~~R~~~~~~~~~~~~~L~I~ 78 (113)
.....+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ ... ...+. .++||.+..+...++++|+|+
T Consensus 5 ~qp~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 84 (227)
T 1mju_H 5 QQPGAELVKPGASVKLSCKASGYTFTNYWINWVKQRPGQGLEWIGNIYPGSSYTHYNEKFKNKATLTVDTSSSTAYMQLS 84 (227)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred cCCCCeEEcCCCCEEEEEEecCCccccceEEEEEeCCCCCcEEEEEEeccCCceeeCCccCCcEEEEEeCCCCeEEEEEC
Confidence 345678899999999999998765 578999998632 222 111 11111 257999876555678999999
Q ss_pred cCCCCCCEEEEEeecCCC--CeeEEEEeceec
Q psy14080 79 FLQKRDNGTYECQAQPYT--TTSHSQNAPGLG 108 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~--~~s~~~~L~V~g 108 (113)
+++.+|+|.|+|++.... .....+.|.|.+
T Consensus 85 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~ 116 (227)
T 1mju_H 85 SLTSDDSAVYYCANKLGWFPYWGQGTLVTVSA 116 (227)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEECS
T ss_pred CCCcccCEEEEEEECCCCceEEcCcEEEEEcC
Confidence 999999999999996432 122345677764
No 168
>1ncn_A T lymphocyte activation antigen CD86; IG V, beta strands, immune system; 2.70A {Homo sapiens} SCOP: b.1.1.1 PDB: 1i85_A
Probab=99.66 E-value=8.5e-16 Score=95.63 Aligned_cols=76 Identities=17% Similarity=0.284 Sum_probs=53.9
Q ss_pred eEEEecCCcEEEEEEEccCCCC-----EEEEEecCCCeEEE-e-cceEE-----cCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKV-----RVSWVRRRDWHILT-S-GVLTY-----TNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~-----~V~W~k~~~~~~l~-~-~~~~~-----~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
.+++.+|++|+|+|.+.+.+.. .|.|+|+....++. . +.... .-.+|+.+.. ++++|+|+++++
T Consensus 3 ~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~----~~~sL~I~~v~~ 78 (110)
T 1ncn_A 3 KIQAYFNETADLPCQFANSQNQSLSELVVFWQDQENLVLNEVYLGKEKFDSVHSKYMGRTSFDS----DSWTLRLHNLQI 78 (110)
T ss_dssp EEEEETTSCEEEECCCCCTTCCCGGGEEEEEEETTCCEEEEEETTEECCSSBCTTTTTSEEEET----TTTEEEECSCCG
T ss_pred EEEEEeCCCEEEEeEeCCCCcCCCccEEEEEEeCCCccEEEEECCcccccccCcccCCcEEEEC----CCEEEEEcCCCh
Confidence 5788999999999999754432 59999986443322 2 21111 1135776642 368999999999
Q ss_pred CCCEEEEEeecC
Q psy14080 83 RDNGTYECQAQP 94 (113)
Q Consensus 83 ~D~G~Y~C~~~~ 94 (113)
+|+|.|+|.+..
T Consensus 79 ~D~G~Y~C~v~~ 90 (110)
T 1ncn_A 79 KDKGLYQCIIHH 90 (110)
T ss_dssp GGCEEEEEEEEE
T ss_pred HHCEEEEEEEEc
Confidence 999999999964
No 169
>2dm2_A Palladin; beta-sandwich, KIAA0992, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=3.5e-16 Score=97.19 Aligned_cols=95 Identities=12% Similarity=0.043 Sum_probs=72.1
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+.. ...++++.+|++++|.|.+.+.+.+.|.|||.. ..+. ....||.+..+ ..+.++|.|.+++.+|
T Consensus 8 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g--~~~~------~~~~~~~~~~~-~~~~~~L~i~~v~~~D 77 (110)
T 2dm2_A 8 APFFEM-KLKHYKIFEGMPVTFTCRVAGNPKPKIYWFKDG--KQIS------PKSDHYTIQRD-LDGTCSLHTTASTLDD 77 (110)
T ss_dssp CCCBSS-CCCCEEEETTCCEEEEEEBCCSSCCEEEEECSS--CBCC------TTCSSEEEEEC-TTCEEEEEESSCCTTT
T ss_pred CCEEEe-cCcCeEEeCCCeEEEEEEEEecCCCEEEEEECC--EECC------CCCCeEEEEEC-CCcEEEEEECCCChhh
Confidence 444433 346788999999999999999888999999843 2221 13568887642 3455799999999999
Q ss_pred CEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 85 NGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+. ..+..+..+.|.|.+.
T Consensus 78 ~G~Y~C~a~N~~g~~~~~~~l~V~~~ 103 (110)
T 2dm2_A 78 DGNYTIMAANPQGRISCTGRLMVQAV 103 (110)
T ss_dssp CSCCEEEEECTTCCEEECCCEEEECC
T ss_pred CEEEEEEEEECCCeEEEEEEEEEECC
Confidence 999999994 5577788888888764
No 170
>1op3_H FAB 2G12, heavy chain; domain-swapped FAB 2G12, anti-carbohydrate antibody, immune system; HET: MAN; 1.75A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1om3_H* 1op5_H* 3oay_M* 1zlu_H* 1zlv_H* 1zlw_H* 2oqj_B 1zls_H* 3ob0_H* 3oau_H* 3oaz_H* 3ghe_H 3eyf_B 3eyo_B 3ghb_H 3c2a_H 1q1j_H 2fl5_H*
Probab=99.66 E-value=1e-15 Score=105.57 Aligned_cols=96 Identities=17% Similarity=0.098 Sum_probs=68.7
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eec----ceEEc--CCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSG----VLTYT--NDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~----~~~~~--~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ ... ...+. .++||.+..+...++++|+|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (225)
T 1op3_H 7 SGGGLVKAGGSLILSCGVSNFRISAHTMNWVRRVPGGGLEWVASISTSSTYRDYADAVKGRFTVSRDDLEDFVYLQMHKM 86 (225)
T ss_dssp ECCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECGGGCCEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEecCCCCEEEEEEecCcccCCceEEEEEeCCCCCcEEEEEEccCCCccccCcccCCceEEEecCCCCEEEEEECCC
Confidence 4457899999999999998765 678999998632 222 211 11111 25799988655567899999999
Q ss_pred CCCCCEEEEEeecCCC------C---eeEEEEeceec
Q psy14080 81 QKRDNGTYECQAQPYT------T---TSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~------~---~s~~~~L~V~g 108 (113)
+.+|+|.|+|.+.... . ....+.|.|.+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~~L~V~~ 123 (225)
T 1op3_H 87 RVEDTAIYYCARKGSDRLSDNDPFDAWGPGTVVTVSP 123 (225)
T ss_dssp CGGGCEEEEEEEECCSSCCSSCCEEEECCCEEEEEES
T ss_pred ChhhCEEEEEEEecCCCccccccceeecCCEEEeccc
Confidence 9999999999996542 1 22345777765
No 171
>1hxm_B Gamma-delta T-cell receptor; IG domain, TCR, GDTCR, immune system; 3.12A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.66 E-value=8.3e-16 Score=107.25 Aligned_cols=99 Identities=18% Similarity=0.166 Sum_probs=71.1
Q ss_pred EeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---Ce-EEEecc---eEEc---CCCCEEEEEeCCCCcEEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WH-ILTSGV---LTYT---NDARFQVIHTDGSDDWNLQI 77 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~-~l~~~~---~~~~---~~~R~~~~~~~~~~~~~L~I 77 (113)
++....+++.+|++|+|+|.+.+. +.+.|.|||+.. .. +++... ..+. .++||.+..+...++++|+|
T Consensus 5 ~q~p~~v~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I 84 (242)
T 1hxm_B 5 EQPQISSTKTLSKTARLECVVSGITISATSVYWYRERPGEVIQFLVSISYDGTVRKESGIPSGKFEVDRIPETSTSTLTI 84 (242)
T ss_dssp ECCCSEEEEETTCCEEEEEEEESSCTTTSCEEEEEECTTSCCEEEEEECSSSCEEECTTCCTTSEEEEEETTTTEEEEEE
T ss_pred CcCCceEEecCCCcEEEEEEeCCccccCceEEEEEeCCCCCcEEEEEEecCCceecCCcccCCeEEEEecCCCcEEEEEE
Confidence 445667899999999999999875 567899999863 22 222211 1121 36899987655557899999
Q ss_pred ccCCCCCCEEEEEeecCCC--------CeeEEEEeceec
Q psy14080 78 KFLQKRDNGTYECQAQPYT--------TTSHSQNAPGLG 108 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~~~--------~~s~~~~L~V~g 108 (113)
++++.+|+|.|+|++.... .....+.|.|.+
T Consensus 85 ~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~~L~V~~ 123 (242)
T 1hxm_B 85 HNVEKQDIATYYCALWEAQQELGKKIKVFGPGTKLIITD 123 (242)
T ss_dssp CSCCGGGCEEEEEEEEEECSSTTCEEEEECCCEEEEEES
T ss_pred CCCCcccCEEEEEeeecCCccccccceeEcCcEEEEEcc
Confidence 9999999999999996432 122346777765
No 172
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.66 E-value=1.4e-15 Score=106.84 Aligned_cols=100 Identities=10% Similarity=0.027 Sum_probs=74.3
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEE-e--cceEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILT-S--GVLTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~-~--~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
+++....+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+. . +......++||.+..+...+.++|+|.++++
T Consensus 6 v~q~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~sL~I~~v~~ 85 (256)
T 3tf7_C 6 VTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGPQMLLKYYSGDPVVQGVNGFEAEFSKSDSSFHLRKASVHR 85 (256)
T ss_dssp EECSCSEEEEETTSCEEECCEEECSSCCEEEEEEECTTSCCEEEEEECSSCSEEECSTTCEEEEETTTTEEEEEESSCCG
T ss_pred EEecCceEEecCCCeEEEEEEeCCCCCceEEEEEECCCCCeEEEEEEccCCcccccCCCeEEEEcCCCCEEEEEECCCCc
Confidence 3455677899999999999999988889999999763 22222 2 1222344789998755677889999999999
Q ss_pred CCCEEEEEeecCCC-----CeeEEEEeceec
Q psy14080 83 RDNGTYECQAQPYT-----TTSHSQNAPGLG 108 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~-----~~s~~~~L~V~g 108 (113)
+|+|.|+|.+.... .....+.|.|.+
T Consensus 86 ~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (256)
T 3tf7_C 86 SDSAVYFCAVSAKGTGSKLSFGKGAKLTVSP 116 (256)
T ss_dssp GGCSEEEEEEECTTCTTCEEECCCEEEEEEC
T ss_pred ccCEEEEEEEecCCCccceEECCCeEEEEeC
Confidence 99999999995432 123345777765
No 173
>2edk_A Myosin-binding protein C, fast-type; IG fold, fast MYBP-C, C-protein, skeletal muscle fast- isoform, MYBPCF, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.66 E-value=1.2e-16 Score=98.15 Aligned_cols=90 Identities=12% Similarity=0.088 Sum_probs=66.7
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCC----CEEEEEeCCCCcEEEEEccC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDA----RFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~----R~~~~~~~~~~~~~L~I~~v 80 (113)
|+..+.....++++.+|++++|.|.+.+.+ +.|.|||.. ..+. .+. ||.+.. ++...+|.|.++
T Consensus 7 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~-~~v~W~k~g--~~i~-------~~~~~~~~~~~~~--~~~~~~L~I~~~ 74 (101)
T 2edk_A 7 GPVLIVTPLEDQQVFVGDRVEMAVEVSEEG-AQVMWMKNG--VELT-------REDSFKARYRFKK--DGKRHILIFSDV 74 (101)
T ss_dssp CCCCEEECCCCEEEESSCCCBCCEEESCSS-CCCEEEESS--CBCC-------CSCCSSCCCEEEE--CSSEEEEECSSC
T ss_pred CCCEEEecCCceEEcCCCCEEEEEEEeCCC-CEEEEEECC--EECC-------CCCCcceeEEEEE--CCCEEEEEECCC
Confidence 344444455678999999999999999887 899999843 2221 122 777763 345679999999
Q ss_pred CCCCCEEEEEeecCCCCeeEEEEeceecc
Q psy14080 81 QKRDNGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
+.+|+|.|+|.+.. .+..+.|.|.+.
T Consensus 75 ~~~D~G~Y~C~a~n---~~~~~~l~V~~~ 100 (101)
T 2edk_A 75 VQEDRGRYQVITNG---GQCEAELIVEEK 100 (101)
T ss_dssp CGGGCSBEEEECSS---CEECCBEEEECC
T ss_pred ChhhCEEEEEEEcC---CcEEEEEEEeCC
Confidence 99999999999964 445567777653
No 174
>2eny_A Obscurin; beta-sandwich, IG-fold, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.66 E-value=2e-16 Score=98.36 Aligned_cols=88 Identities=9% Similarity=0.005 Sum_probs=66.6
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCCC-CEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCE
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIVK-VRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNG 86 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~~-~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 86 (113)
.+....+++++.+|++|+|.|.+.+.+. +.|.|||.. ..+ ..++||.+.. +++..+|.|.+++.+|+|
T Consensus 10 ~~~~~~~~~~v~~G~~v~l~C~v~~~~~~~~v~W~k~g--~~i-------~~~~r~~~~~--~~~~~~L~I~~v~~~D~G 78 (104)
T 2eny_A 10 GITKRLKTMEVLEGESCSFECVLSHESASDPAMWTVGG--KTV-------GSSSRFQATR--QGRKYILVVREAAPSDAG 78 (104)
T ss_dssp CCSBCCCCEEEESSCCEEEEEECSSCCCSSCBCCBSSS--SBC-------SBCSSCEEEE--ETTEEEEEECSCCTTTCS
T ss_pred EEEecCCCcEEcCCCcEEEEEEEcCCCCCceeEEEECC--EEC-------CCCCCEEEEE--cCCEEEEEECCCCHHHCE
Confidence 3444556789999999999999987764 479999843 222 2356888764 345679999999999999
Q ss_pred EEEEeecCCCCeeEEEEeceecc
Q psy14080 87 TYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 87 ~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
.|+|.+.. .+..+.|.|.+.
T Consensus 79 ~Y~C~a~~---~~~~a~L~V~~~ 98 (104)
T 2eny_A 79 EVVFSVRG---LTSKASLIVRER 98 (104)
T ss_dssp CEEEEETT---EEEEECEEEECC
T ss_pred EEEEEECC---eeEEEEEEEeCC
Confidence 99998843 456788888764
No 175
>2edh_A Obscurin; structural genomics, NPPSFA, national project on P structural and functional analyses, riken structural genomics/proteomics initiative; NMR {Homo sapiens}
Probab=99.65 E-value=1.7e-15 Score=94.52 Aligned_cols=89 Identities=17% Similarity=0.138 Sum_probs=67.7
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.+ ....+++++.+|++++|.|.+++. +.|.|||.. . .+ ..++||.+.. +....+|.|.+++.+
T Consensus 18 ~pp~~-~~~~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~-~-~l-------~~~~~~~~~~--~~~~~~L~I~~v~~~ 83 (113)
T 2edh_A 18 LPIKF-TEGLRNEEATEGATAVLRCELSKM--APVEWWKGH-E-TL-------RDGDRHSLRQ--DGARCELQIRGLVAE 83 (113)
T ss_dssp SCCCE-EECCCCCEECTTSCEEEEEEESSC--CCCEEEESS-S-BC-------CCSSSEEEEE--ETTEEEEEECSCCST
T ss_pred CCCcc-cccCCceEEeCCCeEEEEEEECCC--CcEEEEECC-E-EC-------CCCCcEEEEE--CCCEEEEEECCCChh
Confidence 34444 344567799999999999999765 679999843 2 22 2357888874 335679999999999
Q ss_pred CCEEEEEeecCCCCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
|+|.|+|.+ +..+..+.|.|.+.
T Consensus 84 D~G~Y~C~a---~~~~~~~~l~V~~~ 106 (113)
T 2edh_A 84 DAGEYLCMC---GKERTSAMLTVRAM 106 (113)
T ss_dssp TCEEEEEEE---TTEEEEEEEEECCC
T ss_pred hCEEEEEEe---CCCCEEEEEEEeCC
Confidence 999999999 56677788888764
No 176
>2cr6_A KIAA1556 protein, obscurin; IG-fold, immunoglobulin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.65 E-value=2.6e-16 Score=98.95 Aligned_cols=92 Identities=11% Similarity=-0.048 Sum_probs=68.2
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+..+....+++++.+|++++|.|.+.+.+.+.|.|||.. ..+ ..++|+.+.. .+.+..+|.|.+++.+|
T Consensus 12 ~p~~~~~~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~k~g--~~l-------~~~~~~~~~~-~~~~~~~L~I~~v~~~D 81 (115)
T 2cr6_A 12 RRVHIIEDLEDVDVQEGSSATFRCRISPANYEPVHWFLDK--TPL-------HANELNEIDA-QPGGYHVLTLRQLALKD 81 (115)
T ss_dssp SCCEEEECCCEEEEETTSCEECCCEEESTTCCSCEEEESS--CEE-------CCSSSCCBCC-BTTTBCCBEECSCCTTT
T ss_pred CCCeEeccCccEEEeCCCcEEEEEEEcCCCCCccEEEECC--EEC-------CCCCcEEEEE-cCCCEEEEEEcCCChhh
Confidence 4434455557889999999999999999888899999843 222 2355666542 13456799999999999
Q ss_pred CEEEEEeecCCCCeeEEEEeceecc
Q psy14080 85 NGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+ +..+..+.|.|.+.
T Consensus 82 ~G~Y~C~~---g~~~~~~~L~V~~~ 103 (115)
T 2cr6_A 82 SGTIYFEA---GDQRASAALRVTEK 103 (115)
T ss_dssp CEEEEEEE---TTEECCEEEEEECC
T ss_pred CEEEEEEE---CCeeEEEEEEEECC
Confidence 99999994 44555678888764
No 177
>3tjh_C 42F3 alpha; IG MHC, antigen recognition, TCR-PMHC, membrane receptor, IM system; 2.12A {Mus musculus} PDB: 3tpu_A 3tfk_C 1j8h_D* 1fyt_D* 4gkz_A* 3rev_A 1mwa_A* 1g6r_A* 1tcr_A* 2ckb_A 1zgl_M 3c5z_A 1i9e_A* 2oi9_B 2e7l_A 2icw_I 3e2h_B 3e3q_D 4h1l_G
Probab=99.65 E-value=6.6e-16 Score=109.04 Aligned_cols=107 Identities=11% Similarity=0.057 Sum_probs=71.0
Q ss_pred cCCceeeE-----eecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEE-Eecce-EEcCC-CCEEEEEeCCCC
Q psy14080 3 AAPGGILT-----AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHIL-TSGVL-TYTND-ARFQVIHTDGSD 71 (113)
Q Consensus 3 ~~p~~i~~-----~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l-~~~~~-~~~~~-~R~~~~~~~~~~ 71 (113)
|+|+.++. +.+..+++.+|++|+|+|.++......++||||.+ ...| ..... ..... +||.+..+..++
T Consensus 1 ~~~~~~~~~~~V~Qsp~~v~v~~G~sVtL~C~~s~~~~~~v~WyrQ~pg~~~~~Li~~~~~~~~~~~~~Rfs~s~~~~~~ 80 (226)
T 3tjh_C 1 ADPGYLLEAQSVTQPDARVTVSEGASLQLRCKYSYSATPYLFWYVQYPRQGLQMLLKYYSGDPVVQGVNGFEAEFSKSDS 80 (226)
T ss_dssp --------CEEEECSCSEEEEETTSCEEECCEEEESSCEEEEEEEECTTSCCEEEEEECSSSSEEECGGGEEEEEETTTT
T ss_pred CCCccceeeeEEEEeCCEEEEEcCCCEEEEEEEecCCCCeEEEEEECCCCCcEEEEEecCCCccccccCcEEEEEcCCCC
Confidence 34555542 33556899999999999999876667899999973 2333 22211 11124 899988667788
Q ss_pred cEEEEEccCCCCCCEEEEEeecCC---CC--eeEEEEeceecc
Q psy14080 72 DWNLQIKFLQKRDNGTYECQAQPY---TT--TSHSQNAPGLGD 109 (113)
Q Consensus 72 ~~~L~I~~v~~~D~G~Y~C~~~~~---~~--~s~~~~L~V~g~ 109 (113)
.++|+|++++++|+|+|+|++... .. .-....|.|.+.
T Consensus 81 ~~sLtI~~lq~~DSG~YyCa~~~~~~~~~~~fG~GT~LtV~~~ 123 (226)
T 3tjh_C 81 SFHLRKASVHWSDSAVYFCAVSAKGTGSKLSFGKGAKLTVSPN 123 (226)
T ss_dssp EEEEEESSCCGGGCEEEEEEEEESSCSSSEEECCCEEEEEECC
T ss_pred EEEEEEecCCcccCCCEEEEEEecCCccccccCCCeEEEEeCC
Confidence 999999999999999999999632 11 123346666654
No 178
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=99.65 E-value=1.4e-15 Score=108.28 Aligned_cols=85 Identities=16% Similarity=0.183 Sum_probs=67.3
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
++|+.+..+++.+|++++|.|+.+......++||||.+ +.+|....... ...+||... .++.+++|+|+++++
T Consensus 139 vltQsP~slsvs~G~~vtlsC~~S~~~~~~l~WyqQ~PG~~p~lLiy~~s~~~sGvp~RFSgS--~sgt~ftLtIs~lq~ 216 (254)
T 4f9p_D 139 VLTQSPVTLSVTPGDSVSLSCRASQSISNNLHWYRQKSHESPRLLIKYASQSIFGIPSRFSGS--GSGTEFTLSINSVET 216 (254)
T ss_dssp CEEEECSEEEECTTCEEEEEEEESSCCTTCCEEEEECTTSCCEEEEETTTEECTTSCTTCEEE--CCTTEEEEEEESCCT
T ss_pred ccccCCceeEEcCCCcEeeEEEccCcccCCcEEEEECCCCCCEEEEEeeeecCCCCCCCEEee--eeCCEEEEEECCCCH
Confidence 56788888899999999999999877667799999985 34444332222 235799987 466789999999999
Q ss_pred CCCEEEEEeecC
Q psy14080 83 RDNGTYECQAQP 94 (113)
Q Consensus 83 ~D~G~Y~C~~~~ 94 (113)
||+|+|+|+...
T Consensus 217 eD~A~YYC~q~~ 228 (254)
T 4f9p_D 217 EDFGIYFCQQSN 228 (254)
T ss_dssp TCCEEEEEEECS
T ss_pred HHCEEEEEeecC
Confidence 999999999843
No 179
>3nfj_J T cell receptor beta chain; immunoglobulin family, immune system; 2.68A {Homo sapiens} PDB: 3hg1_E
Probab=99.65 E-value=1.5e-15 Score=105.39 Aligned_cols=99 Identities=13% Similarity=0.046 Sum_probs=70.8
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEE-Eecc-eE--EcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HIL-TSGV-LT--YTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l-~~~~-~~--~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
.++....+++.+|++|+|+|.+.+.+.+.|.|||+... ..+ .... .. ....+||.+..+ ..++++|+|.+++
T Consensus 4 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~sL~I~~v~ 82 (245)
T 3nfj_J 4 IHQWPATLVQPVGSPLSLECTVEGTSNPNLYWYRQAAGRGLQLLFYSVGIGQISSEVPQNLSASRP-QDRQFILSSKKLL 82 (245)
T ss_dssp EEEECSEEEEETTCCEEEEEEEESCSSCEEEEEEESTTSCEEEEEEESSTTCCBCSSCCSSEEEEE-ETTEEEEEESSCC
T ss_pred eeCCCceEEecCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEECCCcccCCccCCcEEEEec-CCCEEEEEECCCC
Confidence 34556778999999999999999888899999997632 222 2111 00 112479988753 4578899999999
Q ss_pred CCCCEEEEEeecC-----C--CCeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQP-----Y--TTTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~-----~--~~~s~~~~L~V~g 108 (113)
.+|+|.|+|.+.. . ......+.|.|.+
T Consensus 83 ~~D~G~Y~C~~~~~~g~~~~~~~~~~~~~l~V~~ 116 (245)
T 3nfj_J 83 LSDSGFYLCAWSVSVGAGVPTIYFGEGSWLTVVE 116 (245)
T ss_dssp GGGCEEEEEEEECCTTTSSCCCEECCCEEEEEES
T ss_pred hhhCEEEEEEEeeccCCCceeEEECCCeEEEEEc
Confidence 9999999999965 1 1233445677765
No 180
>1fhg_A Telokin; immunoglobulin fold, beta barrel, contractIle protein; 2.00A {Meleagris gallopavo} SCOP: b.1.1.4 PDB: 1tlk_A
Probab=99.65 E-value=3.5e-15 Score=98.18 Aligned_cols=94 Identities=14% Similarity=0.093 Sum_probs=72.4
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+.. ...++++.+|++++|.|.+.+.+.+.|.|||.. ..+ ..+.|+.+.. ...+..+|.|.+++.+|
T Consensus 41 ~P~~~~-~~~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~g--~~~-------~~~~~~~~~~-~~~~~~~L~I~~v~~~D 109 (154)
T 1fhg_A 41 KPYFTK-TILDMEVVEGSAARFDCKVEGYPDPEVMWFKDD--NPV-------KESRHFQIDY-DEEGNCSLTISEVCGDD 109 (154)
T ss_dssp EEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEETT--EEC-------CCSSSEEEEE-CTTCEEEEEESSCCGGG
T ss_pred CCeEEc-cCCcEEEeCCCeEEEEEEEEEecCCEEEEEECC--EEC-------CCCCcEEEEE-CCCCeEEEEECCCChhc
Confidence 444433 445689999999999999999888999999843 222 2456887764 23456899999999999
Q ss_pred CEEEEEee-cCCCCeeEEEEeceecc
Q psy14080 85 NGTYECQA-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~-~~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+ +..+..+..+.|.|...
T Consensus 110 ~G~Y~C~a~N~~G~~~~~~~l~V~~~ 135 (154)
T 1fhg_A 110 DAKYTCKAVNSLGEATCTAELLVETM 135 (154)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred CEEEEEEEEECCCeEEEEEEEEEeCc
Confidence 99999999 45667778888888754
No 181
>1dn0_B IGM-kappa cold agglutinin (heavy chain); FAB, antibody, human, immune system; 2.28A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 1qlr_B* 2j6e_H* 2agj_H* 2h32_H
Probab=99.65 E-value=1.1e-15 Score=106.36 Aligned_cols=96 Identities=11% Similarity=0.085 Sum_probs=68.8
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEE-Eecc---eEEc--CCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHIL-TSGV---LTYT--NDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l-~~~~---~~~~--~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+.. ...+ +... .... .++||.+..+..+++++|+|++++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (232)
T 1dn0_B 7 WGAGLLKPSETLSLTCAVYGGSFSDYYWSWIRQPPGKGLEWIGEINHSGSTNYNPSLKSRVTISVDTSKNQFSLKLSSVT 86 (232)
T ss_dssp ECCCEECTTSCEEEEEEEESSCCSSCCEEEEEECTTSCCEEEEEECTTCCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCCEEEeCCCcEEEEEEEccccCCCceEEEEEeCCCCCeEEEEEEecCCceeeCCccCCeEEEEEeCCCCEEEEEECCCC
Confidence 4557899999999999998754 57899999863 2333 2211 1111 257999886656678999999999
Q ss_pred CCCCEEEEEeecC-C---C---CeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQP-Y---T---TTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~-~---~---~~s~~~~L~V~g 108 (113)
.+|+|.|+|++.. . + .....+.|.|.+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~L~V~~ 120 (232)
T 1dn0_B 87 AADTAVYYCARPPHDTSGHYWNYWGQGTLVTVSS 120 (232)
T ss_dssp GGGCEEEEEEECSSTTSCSCCSEECCCEEEEECS
T ss_pred cccCEEEEEEEecCCcCCchhhhcccceEEEEcc
Confidence 9999999999973 1 1 123446777765
No 182
>1gxe_A Myosin binding protein C, cardiac-type; cytoskeleton, muscle, IGI, thick filament, immunoglobulin domain; NMR {Homo sapiens} SCOP: b.1.1.4
Probab=99.65 E-value=3.4e-16 Score=102.72 Aligned_cols=96 Identities=11% Similarity=0.055 Sum_probs=71.2
Q ss_pred eecceEEEecCCcEEEEEEEccCCCCEEEEEecCC-C------------------eEEEecceEE-cCCCCEEEEEeCCC
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD-W------------------HILTSGVLTY-TNDARFQVIHTDGS 70 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~-~------------------~~l~~~~~~~-~~~~R~~~~~~~~~ 70 (113)
...+++++.+|++++|.|.+.+.|.+.|.|+|.+. . .....+...+ ..+.|+.+.. ..
T Consensus 23 ~~p~~~~v~~G~~v~L~C~~~G~P~P~i~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~r~~i~~--~~ 100 (139)
T 1gxe_A 23 RIPDTIVVVAGNKLRLDVPISGDPAPTVIWQKAITQGNKAPARPAPDAPEDTGDSDEWVFDKKLLCETEGRVRVET--TK 100 (139)
T ss_dssp CCCCEEEESSSSCCCCEEECCSBSCCEEEEEEECCCSCSSCCCCCCCCCCCCCCSSCCCCSCCCCCSCSSSCEEEE--ET
T ss_pred CCCCCEEEeCCCeEEEEEEEEEcCCCeEEEEECCcccccccccccccccccccccccccccceeecCCCCeEEEEe--CC
Confidence 34678899999999999999999999999999651 0 0000011111 2356887763 23
Q ss_pred CcEEEEEccCCCCCCEEEEEee-cCCCCeeEEEEeceec
Q psy14080 71 DDWNLQIKFLQKRDNGTYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 71 ~~~~L~I~~v~~~D~G~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
...+|.|.+++.+|+|.|.|.+ +..+..+..+.|.|.+
T Consensus 101 ~~s~L~I~~v~~~DsG~Y~C~A~N~~G~~~~~~~L~V~d 139 (139)
T 1gxe_A 101 DRSIFTVEGAEKEDEGVYTVTVKNPVGEDQVNLTVKVID 139 (139)
T ss_dssp TEEEEECSCCCTTTCEEEEEEEECSSCEEEEEEEEEECC
T ss_pred CEEEEEECCCCcccCEEEEEEEEeCCceEEEEEEEEEEC
Confidence 4579999999999999999999 5668888889998863
No 183
>3gsn_A RA14 TCR alpha chain (TRAV24, TRAJ49); HLA, human cytomegalovirus, PP65, T cell receptor (TCR), immune response, public response; 2.80A {Homo sapiens}
Probab=99.64 E-value=3.4e-16 Score=108.49 Aligned_cols=100 Identities=13% Similarity=-0.000 Sum_probs=71.3
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEE-Eecce-EEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHIL-TSGVL-TYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l-~~~~~-~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.++......+.||||.+ ...| ..... .....+||.+..+..++.++|+|++++++|
T Consensus 4 ~Q~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~Rfs~~~~~~~~~~sL~I~~l~~~D 83 (199)
T 3gsn_A 4 EQSPQSLHVQEGDSTNFTCSFPSSNFYALHWYRWETAKSPEALFVMTLNGDEKKKGRISATLNTKEGYSYLYIKGSQPED 83 (199)
T ss_dssp EEECSEEEEETTCCCEEEEECCCTTCCCEEEEEECTTSCCEEEEEECSTTCCCEETTEECCCBTTTTEEEEEBSSCCGGG
T ss_pred EECCCEEEEeCCCCEEEEEEEcCCCCCEEEEEEECCCCCcEEEEEECCCCCccccCceEEEECCCCCEEEEEEccCcccC
Confidence 455667899999999999999876667899999973 2333 22211 112257998875567788999999999999
Q ss_pred CEEEEEeecCCCC--eeEEEEeceecc
Q psy14080 85 NGTYECQAQPYTT--TSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~~~--~s~~~~L~V~g~ 109 (113)
+|+|+|++..... .-....|.|.+.
T Consensus 84 sG~Y~Ca~~~~~~~~fG~GT~L~V~~~ 110 (199)
T 3gsn_A 84 SATYLCARNTGNQFYFGTGTSLTVIPN 110 (199)
T ss_dssp CEEEEEEEESSSCEEECSCEEEEEECC
T ss_pred CccEEEEEcccccccCCCCEEEEEecc
Confidence 9999999954221 123346666653
No 184
>3r0n_A Poliovirus receptor-related protein 2; IG-domain, cell-adhesion molecule, virus entry receptor, STR genomics, PSI-biology; 1.30A {Homo sapiens} PDB: 4dfh_A 4dfi_A
Probab=99.64 E-value=6.1e-16 Score=98.54 Aligned_cols=99 Identities=14% Similarity=0.136 Sum_probs=67.3
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCCCC----EEEEEecCC----CeEEEe--c-ceEEcC----CCCEEEEEeC----
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIVKV----RVSWVRRRD----WHILTS--G-VLTYTN----DARFQVIHTD---- 68 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~~~----~V~W~k~~~----~~~l~~--~-~~~~~~----~~R~~~~~~~---- 68 (113)
+.......+++.+|++|+|+|.+.....+ .|.|||+.. ..+... . ...... .+|+.+..+.
T Consensus 4 ~~v~~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~g 83 (128)
T 3r0n_A 4 VRVQVLPEVRGQLGGTVELPCHLLPPVPGLYISLVTWQRPDAPANHQNVAAFHPKMGPSFPSPKPGSERLSFVSAKQSTG 83 (128)
T ss_dssp CEEECCSEEECCTTSCEEECCEEESCCTTCEEEEEEEECTTSCGGGCEEEEEETTTEEECCSSSSCGGGEEESSCBCCCS
T ss_pred eEEecCCeEEEEcCCCEEEEEEeecCCCCCcEEEEEEEEeCCCCCCeeEEEEecccCcccccccccCCcEEEeccccccc
Confidence 34445667889999999999999876544 899999742 222222 1 111111 2577765321
Q ss_pred -----CCCcEEEEEccCCCCCCEEEEEeecCC--CCeeEEEEece
Q psy14080 69 -----GSDDWNLQIKFLQKRDNGTYECQAQPY--TTTSHSQNAPG 106 (113)
Q Consensus 69 -----~~~~~~L~I~~v~~~D~G~Y~C~~~~~--~~~s~~~~L~V 106 (113)
+.++++|+|.+++.+|+|.|+|.+.+. +..+..++|.|
T Consensus 84 ~~~~~~~~~~sL~I~~v~~~D~G~Y~C~v~~~~~g~~~~~~~L~V 128 (128)
T 3r0n_A 84 QDTEAELQDATLALHGLTVEDEGNYTCEFATFPKGSVRGMTWLRV 128 (128)
T ss_dssp TTCCCBCSBCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEC
T ss_pred cccccCCCCeEEEEccCCchhCeEEEEEEEeCCCCCcccEEEEEC
Confidence 124789999999999999999998654 45667777765
No 185
>1q9r_B S25-2 FAB (IGG1K) heavy chain; antigen-binding fragment, anti-carbohydrate, anti-LPS, antibody, immunoglobulin, KDO, complex, immune system; HET: KDA KDO; 1.45A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q9l_B 1q9k_B* 1q9q_B* 1q9v_B* 2r1w_B* 2r1x_B* 2r1y_B* 2r2b_B* 2r2e_B* 2r2h_B* 3bpc_B* 3sy0_B* 3t4y_B* 3t65_B* 2r23_B* 1q9t_B* 3t77_B* 3okl_B* 3okk_B* 3okm_B ...
Probab=99.64 E-value=1.4e-15 Score=104.21 Aligned_cols=96 Identities=16% Similarity=0.110 Sum_probs=67.2
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Ee--c----ceEEc--CCCCEEEEEeCCCCcEEEEEc
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TS--G----VLTYT--NDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~--~----~~~~~--~~~R~~~~~~~~~~~~~L~I~ 78 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ .. + ..... .++||.+..+...++++|+|+
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (222)
T 1q9r_B 7 SGGGLVQSGGSLRLSCATSGFTFTDYYMSWVRQPPGKALEWLGFIRNKANGYTTEYSPSVKGRFTISRDNSQSILYLQMN 86 (222)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECCGGGTTCEEECTTTBTTEEEEEETTTTEEEEEEC
T ss_pred CCceeEcCCCEEEEEEEecCccCCCCcEEEEEECCCCCcEEEEEEccCCcccccccCcccCCceEEEEECCCCeEEEEEC
Confidence 4467899999999999998754 678999998632 222 21 1 11111 247999886555678999999
Q ss_pred cCCCCCCEEEEEeecCCC------CeeEEEEeceec
Q psy14080 79 FLQKRDNGTYECQAQPYT------TTSHSQNAPGLG 108 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~------~~s~~~~L~V~g 108 (113)
+++.+|+|.|+|.+.... .....+.|.|..
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 122 (222)
T 1q9r_B 87 TLRAEDSATYYCARDHDGYYERFSYWGQGTLVTVSA 122 (222)
T ss_dssp SCCGGGCEEEEEEECCCSSCCSCCCBCCCEEEEECS
T ss_pred cCCcccCeEEEEEEeccCCcccceEeCCceEEEecc
Confidence 999999999999996432 223345666653
No 186
>3nl4_L Antigen binding fragment, immunoglobulin IGG - LI; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_L
Probab=99.64 E-value=3.5e-15 Score=101.16 Aligned_cols=98 Identities=16% Similarity=0.158 Sum_probs=70.6
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
+++....+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+....... ..++||.+.. ..+.++|+|.+++.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~ 81 (213)
T 3nl4_L 4 MTQTPASVSEPVGGTVTIKCQASQSISSYLAWYQQKPGQRPRLLIYETSTLASGVPSRFKGSG--SGTDFTLTISDLECA 81 (213)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEECSCCGG
T ss_pred EEeCCCeEEEcCCCCEEEEEEecCCCCceEEEEEECCCCCcEEEEEeCCccCCCCCccEEEec--CCCEEEEEECCCChH
Confidence 3455677899999999999999998888999999752 23333221111 2257998873 457889999999999
Q ss_pred CCEEEEEeecCCC----CeeEEEEeceec
Q psy14080 84 DNGTYECQAQPYT----TTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~~~~----~~s~~~~L~V~g 108 (113)
|+|.|+|.+.... ..+..+.|.|..
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 110 (213)
T 3nl4_L 82 DAATYYCQSTYENPTYVSFGGGTEVGVKG 110 (213)
T ss_dssp GCEEEEEEECCSSTTTCEECCCEEEEEEC
T ss_pred HCEEEEEecCCCCceeEEeCCCeEEEEeC
Confidence 9999999996432 234445566643
No 187
>2dlt_A Myosin binding protein C, fast-type; IG-like domain, mybpc2, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.64 E-value=5.3e-16 Score=96.01 Aligned_cols=90 Identities=18% Similarity=0.047 Sum_probs=66.4
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+ .....++++.+|++++|.|.+.+.+.+ |.|||.. . .+ ..++|+.+.. +....+|.|.+++.+|
T Consensus 8 ~p~~-~~~~~~~~v~~G~~v~l~C~~~~~~~~-v~W~k~g-~-~~-------~~~~~~~~~~--~~~~~~L~I~~v~~~D 74 (106)
T 2dlt_A 8 QLEV-LQDIADLTVKAAEQAVFKCEVSDEKVT-GKWYKNG-V-EV-------RPSKRITISH--VGRFHKLVIDDVRPED 74 (106)
T ss_dssp CCCE-EECCCCEEEESSCCEECCCEESCSSCE-EEEEESS-C-BC-------CCCSSCEEEE--ETTEEEEEESSCCTTT
T ss_pred CCEE-ecCCCCeEEeCCCeEEEEEEEcCCCcc-eEEEcCC-E-EC-------cCCCCEEEEE--eCCEEEEEECCCCcCC
Confidence 4444 344567899999999999999987766 9999853 2 11 2356887763 2356799999999999
Q ss_pred CEEEEEeecCCCCeeEEEEeceec
Q psy14080 85 NGTYECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~~~~s~~~~L~V~g 108 (113)
+|.|+|.+... ..+..+.|.|+.
T Consensus 75 ~G~Y~C~a~n~-~~~~~~~l~V~~ 97 (106)
T 2dlt_A 75 EGDYTFVPDGY-ALSLSAKLNFLE 97 (106)
T ss_dssp CSCEEEEEETS-CCCCCBCEEEEC
T ss_pred CEEEEEEEccC-CceEEEEEEEEE
Confidence 99999999654 445556666664
No 188
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.64 E-value=1.6e-15 Score=106.13 Aligned_cols=106 Identities=14% Similarity=0.067 Sum_probs=71.7
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Ee--c-ceEE--cCCCCEEEEEeCCCCc
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TS--G-VLTY--TNDARFQVIHTDGSDD 72 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~--~-~~~~--~~~~R~~~~~~~~~~~ 72 (113)
.++.+.......+++.+|++|+|+|.+.+. +.+.|.|||+.+. ..+ .. + .... ...+||.+..+...+.
T Consensus 6 ~~~~v~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~ 85 (257)
T 3gkz_A 6 DDKEVQLQESGPSLVKPSQTLSLTCSVTGDSVTSGYWSWIRQFPGNKLDYMGYISYRGSTYYNPSLKSRISITRDTSKNQ 85 (257)
T ss_dssp ---CEEEEEECCSEECTTCCEEEEEEEEESCCSSCEEEEEEECTTSCEEEEEEEETTCCEEECTTTTTTEEEEEEGGGTE
T ss_pred CCccEEEECCCCeEEcCCCcEEEEEEEEcccccceEEEEEEECCCCCcEEEEEEecCCcEEecccccccEEEEEecCCce
Confidence 345555556667789999999999999984 4689999997632 222 11 1 1111 1257999886555678
Q ss_pred EEEEEccCCCCCCEEEEEeecCC-----CCeeEEEEeceecc
Q psy14080 73 WNLQIKFLQKRDNGTYECQAQPY-----TTTSHSQNAPGLGD 109 (113)
Q Consensus 73 ~~L~I~~v~~~D~G~Y~C~~~~~-----~~~s~~~~L~V~g~ 109 (113)
++|+|.+++++|+|.|+|.+... ...+..+.|.|.+.
T Consensus 86 ~~L~I~~v~~~DsG~Y~C~~~n~~~~~~~~~~~~~~l~V~~~ 127 (257)
T 3gkz_A 86 VYLQLKSVSSEDTATYYCSYFDSDDYAMEYWGQGTSVTVSGG 127 (257)
T ss_dssp EEEEECSCCGGGCEEEEEEEECTTCTTCEEECCCEEEEEC--
T ss_pred EEEEECCCChhhCEEEEEEEecCCCcceeEEcCCEEEeecCc
Confidence 89999999999999999999653 12234566777654
No 189
>3nl4_H Antigen binding fragment,immunoglobulin IGG - HEA; FAB, rabbit, conformation-specific, amyloid, immune system; 1.54A {Oryctolagus cuniculus} PDB: 4hbc_H
Probab=99.63 E-value=2.1e-15 Score=102.96 Aligned_cols=94 Identities=16% Similarity=0.072 Sum_probs=66.5
Q ss_pred ecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eec-c-e-EE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSG-V-L-TY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~-~-~-~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
....+++.+|++|+|+|.+.+. +.+.|.|||+..+ ..+ ... . . .. ..++||.+.. ..+.++|+|+++
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v 82 (215)
T 3nl4_H 5 ESGGRLVTPGTPLTLACTVSGFSLNTYSMFWVRQAPGKGLQWIGIISNFGVIYYATWAKGRFTISK--TSTTVDLKITSP 82 (215)
T ss_dssp EECCCEECTTCCEEEEEEEESSCTTTCCEEEEEECTTSCEEEEEEECTTCCEEECGGGTTTEEEEE--CSSEEEEEESSC
T ss_pred cCCCEEEcCCCcEEEEEEecCcccCCCeEEEEEECCCCCeEEEEEEecCCccccCCcccCCEEEEe--eCCEEEEEECCC
Confidence 4456789999999999999763 3678999998632 222 211 1 0 11 1357999874 567899999999
Q ss_pred CCCCCEEEEEeecCCCC-----eeEEEEecee
Q psy14080 81 QKRDNGTYECQAQPYTT-----TSHSQNAPGL 107 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~~-----~s~~~~L~V~ 107 (113)
+.+|+|.|+|.+..... ....+.|.|+
T Consensus 83 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~ 114 (215)
T 3nl4_H 83 TTEDTATYFCVRKYGSEWGGDLWGPGTLVTVS 114 (215)
T ss_dssp CGGGCEEEEEEEECSSSSCEEEECCCEEEEEC
T ss_pred CcccCEEEEEEEecCCCccceEEcCCEEEEEe
Confidence 99999999999965421 3444566665
No 190
>2xqy_G A13-D6.3 monoclonal antibody, envelope glycoprotein H; immune system-viral protein complex, envelope protein; HET: NAG; 2.05A {Mus musculus}
Probab=99.63 E-value=1.7e-15 Score=107.60 Aligned_cols=98 Identities=11% Similarity=0.085 Sum_probs=69.7
Q ss_pred eecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eec----ceEE--cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSG----VLTY--TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~----~~~~--~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
.....+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ ... ...+ ..++||.+..+...+.++|+|+
T Consensus 11 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 90 (261)
T 2xqy_G 11 QQPGAELVKPGASVKMSCKASGYSFTSYWMNWVKQRPGRGLEWIGRIDPSDNETHYNQDFKDKVTLTVDKSSSTVYIQLS 90 (261)
T ss_dssp ECCSEEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred ECCCCEEEcCCCCEEEEEEeCCcccCCceEEEEEeCCCCCcEEEEEEecCCCceeeCCccCCcEEEEecCCCCEEEEEEc
Confidence 345678999999999999998765 578999998632 222 211 1111 1257999876544568999999
Q ss_pred cCCCCCCEEEEEeecCCC----CeeEEEEeceec
Q psy14080 79 FLQKRDNGTYECQAQPYT----TTSHSQNAPGLG 108 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~----~~s~~~~L~V~g 108 (113)
+++.+|+|.|+|++...+ .....+.|.|.+
T Consensus 91 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~~~L~V~~ 124 (261)
T 2xqy_G 91 SLTSEDSAVYYCGRLGYVYGFDYWGQGTTLTVSS 124 (261)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEECS
T ss_pred CCCcccCeEEEEEEecCCCcceEECCCEEEEEcc
Confidence 999999999999997543 122345777764
No 191
>2e7b_A Obscurin; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yz8_A
Probab=99.63 E-value=7.8e-16 Score=94.55 Aligned_cols=90 Identities=12% Similarity=0.138 Sum_probs=66.6
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.+. ...+++++.+|++++|.|.+.+.+.+ |.|||.. . .+ ..+.||.+.. +...++|.|.+++.+
T Consensus 7 ~pp~~~-~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~~-~-~l-------~~~~~~~~~~--~~~~~~L~I~~v~~~ 73 (103)
T 2e7b_A 7 GPVRFQ-EALKDLEVLEGGAATLRCVLSSVAAP-VKWCYGN-N-VL-------RPGDKYSLRQ--EGAMLELVVRNLRPQ 73 (103)
T ss_dssp CCCCCT-BCCCCEEEESSSCEEEEEECSSCCCS-CEEEESS-S-BC-------CCSSSEEEEE--CSSEEEEEECSCCTT
T ss_pred CCCEEE-ecCccEEEECCCcEEEEEEEeCCCCC-eEEEECC-E-EC-------CCCCcEEEEE--cCCEEEEEEccCCcc
Confidence 355554 34566899999999999999988878 9999843 2 21 2356888763 456779999999999
Q ss_pred CCEEEEEeecCCCCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
|+|.|+|.+ +..+..+.|.|.+.
T Consensus 74 D~G~Y~C~~---g~~~~~~~l~V~~~ 96 (103)
T 2e7b_A 74 DSGRYSCSF---GDQTTSATLTVTAL 96 (103)
T ss_dssp TCCCEEEEC---SSCBCCBCEEEECC
T ss_pred cCEEEEEEE---CCcEEEEEEEEEec
Confidence 999999983 33445566766653
No 192
>2dm7_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2edl_A 2edw_A 2gqh_A 2edt_A 2edq_A 2edr_A
Probab=99.63 E-value=1.3e-15 Score=94.26 Aligned_cols=89 Identities=16% Similarity=0.255 Sum_probs=67.4
Q ss_pred cCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 3 ~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
+.|+.+... .+++++.+|++++|.|.+.+. +.|.|||... . + ..+.||.+.. +...++|.|.+++.
T Consensus 6 ~~pp~~~~~-~~~~~v~~G~~v~l~C~~~~~--p~v~W~k~~~-~-~-------~~~~~~~~~~--~~~~~~L~I~~v~~ 71 (108)
T 2dm7_A 6 SGPARFTQD-LKTKEASEGATATLQCELSKV--APVEWKKGPE-T-L-------RDGGRYSLKQ--DGTRCELQIHDLSV 71 (108)
T ss_dssp CCCCCBCSC-CBCCEEETTSCEEEEEEBSSS--CCCEEESSSS-B-C-------CSSSSCEEEE--ETTEEEEEESSCCT
T ss_pred CCCCeeeec-CCcEEEeCCCcEEEEEEeCCC--CeeEEEECCE-E-C-------CCCCCEEEEe--cCCEEEEEECCCCc
Confidence 456666544 467899999999999999865 6799998532 1 1 2457888764 34567899999999
Q ss_pred CCCEEEEEeecCCCCeeEEEEeceec
Q psy14080 83 RDNGTYECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~~~s~~~~L~V~g 108 (113)
+|+|.|+|.+.. .+..+.|.|..
T Consensus 72 ~D~G~Y~C~a~n---~~~~~~l~V~~ 94 (108)
T 2dm7_A 72 ADAGEYSCMCGQ---ERTSATLTVRA 94 (108)
T ss_dssp TTCSEEEEEETT---EEEEEECEEEC
T ss_pred ccCEEEEEEEcC---CEEEEEEEEec
Confidence 999999999933 46677888876
No 193
>3c6l_A TCR 2W20 alpha chain; TCR-PMHC complex; 3.40A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.43 E-value=2e-17 Score=113.39 Aligned_cols=100 Identities=16% Similarity=0.129 Sum_probs=71.0
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---e-EEEec-ceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---H-ILTSG-VLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~-~l~~~-~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++....+++.+|++|+|+|.+++...+.|.|||+.++ . +++.. .......+||.+..+..++.++|+|++++.+|
T Consensus 4 ~Q~p~~v~v~~G~svtL~C~~s~~~~~~v~Wyrq~~g~~~~~li~~~~~~~~~~~~R~s~~~~~~~~~~sL~I~~v~~~D 83 (185)
T 3c6l_A 4 RQSPQSLTVWEGETAILNCSYEDSTFDYFPWYHQFPGESPALLIAIRPVSNKKEDGRFTIFFNKREKKFSLHIADSQPGD 83 (185)
Confidence 3445678899999999999998766568999998742 2 22221 11112367999875455678999999999999
Q ss_pred CEEEEEeecCC-CCeeEEEEeceecc
Q psy14080 85 NGTYECQAQPY-TTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~-~~~s~~~~L~V~g~ 109 (113)
+|+|+|++... ........|.|++.
T Consensus 84 sG~Y~C~~~~~~~~fg~gT~L~V~~~ 109 (185)
T 3c6l_A 84 SATYFCAASDNRIFFGDGTQLVVKPN 109 (185)
Confidence 99999999642 12234457777654
No 194
>3mlr_H Human monoclonal anti-HIV-1 GP120 V3 antibody 255 heavy chain; human monoclonal antibody, FAB, third variable antibody-antigen interaction; 1.80A {Homo sapiens} PDB: 3mls_H 3mlt_H 3mlu_H 3mlv_H
Probab=99.63 E-value=7.9e-16 Score=106.63 Aligned_cols=82 Identities=15% Similarity=0.091 Sum_probs=60.8
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEE-Eecc---e-EE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHIL-TSGV---L-TY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l-~~~~---~-~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
+..+++.+|++|+|+|.+++. ....|.|||+.. ...+ .... . .. ...+||.+..+...++++|+|+++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~rq~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (226)
T 3mlr_H 7 SGGEVKQPGQSLKISCKSSGYNFLDSWIGWVRQIPGKGLEWIGIIYPDDSDAHYSPSFEGQVTMSVDKSISTAYLQWTTL 86 (226)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTBTTBEEEEEGGGTEEEEEESSC
T ss_pred CCCEEEecCCCEEEEEEecCccccCCEEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEecCCCCEEEEEECCC
Confidence 345889999999999999753 356899999873 2222 2211 1 11 124799998666667899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+.+|+|+|+|++..
T Consensus 87 ~~~DsG~Y~C~~~~ 100 (226)
T 3mlr_H 87 QASDTGKYFCTRLY 100 (226)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CcccCEEEEEeEcc
Confidence 99999999999954
No 195
>3kvq_A Vascular endothelial growth factor receptor 2; vegfr2, angiogenesis, ATP-binding, developmental protein, differentiation, glycoprotein; 2.70A {Homo sapiens} SCOP: b.1.1.0
Probab=99.63 E-value=9.9e-16 Score=94.43 Aligned_cols=91 Identities=18% Similarity=0.165 Sum_probs=63.3
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+.. ...++++.+|+++.|.|.+.+.+.+.+.|+|... .+ ..+.|+.... ++.+|.|.+++.+|
T Consensus 10 ~P~~~~-~~~~~~v~~G~~v~l~C~~~g~p~p~i~W~~~~~-~~--------~~~~~~~~~~----~~~~L~i~~v~~~D 75 (108)
T 3kvq_A 10 APTITG-NLENQTTSIGESIEVSCTASGNPPPQIMWFKDNE-TL--------VEDSGIVLKD----GNRNLTIRRVRKED 75 (108)
T ss_dssp -CCCBS-CCCCEEEETTCCEEEECBCC----CCEEEEESSS-BC--------CCBTTEEEET----TTTEEEECSCCGGG
T ss_pred CCceec-CCCCeEEeCCCeEEEEEECcCcCCCeEEEEECCe-Ec--------ccCCCeEEeC----CCcEEEEeecCccc
Confidence 444433 3467889999999999999988888999998542 11 1245555542 45689999999999
Q ss_pred CEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 85 NGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+. ..+..+..+.|.|.+.
T Consensus 76 ~G~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (108)
T 3kvq_A 76 EGLYTCQACSVLGCAKVEAFFIIEGA 101 (108)
T ss_dssp CEEEEEEEC----CEEEEEEEEEEC-
T ss_pred CEEEEEEEEeCCCceEEEEEEEEeCC
Confidence 999999994 5577888899999875
No 196
>2dm3_A KIAA0992 protein, palladin; beta-sandwich, myopalladin, actin-associated scaffold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.63 E-value=7.3e-16 Score=95.44 Aligned_cols=95 Identities=18% Similarity=0.122 Sum_probs=70.8
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.++. ...++++.+|++++|.|.+.+.+.+.|.|+|.. ..+ ..+.++.... ...+..+|.|.+++.+
T Consensus 8 ~~P~i~~-~~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g-~~~--------~~~~~~~~~~-~~~~~~~L~i~~v~~~ 76 (110)
T 2dm3_A 8 FRPHFLQ-APGDLTVQEGKLCRMDCKVSGLPTPDLSWQLDG-KPV--------RPDSAHKMLV-RENGVHSLIIEPVTSR 76 (110)
T ss_dssp CCCEEEE-CCCEEEEESSSCBCCEEEEECSSCCEEECBBSS-SBC--------CCCSSEEEEE-CTTSCEEEEESSCCGG
T ss_pred CCCcEEe-CCCcEEEeCCCEEEEEEEEEEcCCCEEEEEECC-EEC--------CCCCceEEEE-ecCCeEEEEEeeCCcc
Confidence 3555544 456789999999999999999888999999843 221 1233333332 3345679999999999
Q ss_pred CCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
|+|.|+|.+. ..+..+..+.|.|.+.
T Consensus 77 D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 103 (110)
T 2dm3_A 77 DAGIYTCIATNRAGQNSFSLELVVAAK 103 (110)
T ss_dssp GCSBBCEEEECSSCEEEECCEEEEECC
T ss_pred cCEEEEEEEECCCCEEEEEEEEEEeCC
Confidence 9999999994 5577788889998865
No 197
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.63 E-value=1.1e-15 Score=109.17 Aligned_cols=85 Identities=21% Similarity=0.211 Sum_probs=66.6
Q ss_pred eeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 7 GILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 7 ~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
.++|+.+..+++.+|++|+|.|+.+..-...++||+|.+ +.+|....... ...+||.... .+.+++|+|+++|
T Consensus 2 ivlTQsP~sls~s~G~~vtisC~~S~~i~~y~~WyqQ~pG~~P~lLiy~~s~~~sGvp~RFSgS~--Sgt~ftLtIs~lq 79 (259)
T 4f9l_D 2 IVLTQSPSSLSASLGDTITITCHASQNINLWLSWYQQRPGNIPKLLIYRASNLHTGVPSRFSGSG--SATGFTLTISSLQ 79 (259)
T ss_dssp CCEEEECSBCCBCTTCEEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEEESCC
T ss_pred CCEEccCCeEEECCCCCEEEEEEcCCCCCCCEEEEEECCCCCCEEEEECCCccCCCCCCCEEeec--cCCeEEEEEcccC
Confidence 367888888899999999999999866566799999985 34444332222 2357999764 4578999999999
Q ss_pred CCCCEEEEEeec
Q psy14080 82 KRDNGTYECQAQ 93 (113)
Q Consensus 82 ~~D~G~Y~C~~~ 93 (113)
+||+|+|+|+..
T Consensus 80 ~eD~A~YyC~~~ 91 (259)
T 4f9l_D 80 PEDIATYYCQQG 91 (259)
T ss_dssp GGGCEEEEEEEC
T ss_pred hhhCEEEEEeec
Confidence 999999999984
No 198
>1c5d_H Monoclonal antibody against the main immunogenic the human muscle acetylcholine receptor...; immunoglobulin, immune system; 2.40A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 2arj_H 3b9k_H* 2gk0_H 2gjz_H 1fn4_B 3mj8_H 3mj9_H*
Probab=99.63 E-value=1.7e-15 Score=103.81 Aligned_cols=96 Identities=16% Similarity=0.091 Sum_probs=68.0
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEEE-ec---ceEE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHILT-SG---VLTY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l~-~~---~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+.. ...+. .. .... ...+||.+..+...++++|+|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 86 (215)
T 1c5d_H 7 SGPGLVQPSQTLSLTCTVSGFPLTTNGVSWVRQPPGKGLEWIAAISSGGSPYYNSALKSRLSINRDTSKSQVFLKMNSLQ 86 (215)
T ss_dssp ECCCEECTTCCEEEEEEECSSCTTSCCEEEEEECTTSCCEEEEEECTTCCEECCTTTGGGEEEEEETTTTEEEEEESSCC
T ss_pred CCCeeecCCCcEEEEEEECCCcCCCCeEEEEEECCCCCcEEEEEEcCCCCcEECCcccCcEEEEeeCCCceEEEEECCCC
Confidence 4567899999999999998753 57899999863 22222 21 1111 1246999876555678999999999
Q ss_pred CCCCEEEEEeecCCC----CeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPYT----TTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~----~~s~~~~L~V~g 108 (113)
.+|+|.|+|++...+ .....+.|.|.+
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~~~~~L~V~~ 117 (215)
T 1c5d_H 87 TEDTAIYFCTREDGWNYFDYWGPGTMVTVSS 117 (215)
T ss_dssp GGGCEEEEEEECCSSSCSCCBCCCEEEEECS
T ss_pred cccCEEEEEEEecCCcccceEcCCEEEEecC
Confidence 999999999996532 233346777764
No 199
>2yr3_A Myosin light chain kinase, smooth muscle; IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.63 E-value=1.1e-15 Score=93.14 Aligned_cols=89 Identities=18% Similarity=0.102 Sum_probs=65.4
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.+... ...+++.+|++++|.|.+.+.+.+.|.|+|.. . .+. ..+.... .+..+|.|.+++.+
T Consensus 10 ~~P~~~~~-~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~g-~-~~~--------~~~~~~~----~~~~~L~i~~v~~~ 74 (99)
T 2yr3_A 10 VAPSFSSV-LKDCAVIEGQDFVLQCSVRGTPVPRITWLLNG-Q-PIQ--------YARSTCE----AGVAELHIQDALPE 74 (99)
T ss_dssp EEEEEEEC-CCCEEECTTCCEEEECEEEEESCCCCEEEESS-S-BCS--------SCCCEEE----TTEEEEEECSCCTT
T ss_pred cCCceeec-CCCCEEeCCCeEEEEEEEeeeCCCeEEEEECC-E-ECc--------ccceEee----CCeEEEEECCCChh
Confidence 35555543 56788999999999999998888899999843 1 111 1122222 24679999999999
Q ss_pred CCEEEEEeec-CCCCeeEEEEecee
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGL 107 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~ 107 (113)
|+|.|+|.+. ..+..+..+.|.|.
T Consensus 75 D~G~Y~C~a~N~~g~~~~~~~l~V~ 99 (99)
T 2yr3_A 75 DHGTYTCLAENALGQVSCSAWVTVH 99 (99)
T ss_dssp CCBCEEEEEECSSCEEEEECCEEEC
T ss_pred hCEEEEEEEEECCCeEEEEEEEEEC
Confidence 9999999994 55677777777763
No 200
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.63 E-value=2.5e-15 Score=105.19 Aligned_cols=96 Identities=9% Similarity=0.090 Sum_probs=69.0
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eec---c-eEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSG---V-LTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~---~-~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+.+. ..+ ... . ... ..++||.+..+...+.++|+|.++
T Consensus 9 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 88 (256)
T 3umt_A 9 SGLELVKPGASVKISCKTSGYTFTEYTMHWVKQSHGKSLEWIGGINPNNGGTSYNQKFKGKAILTVDKSSSTAYLELRSL 88 (256)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECGGGTTTEEEEEEGGGTEEEEEECSC
T ss_pred cCceEEcCCCCEEEEEEEecccccccEEEEEEECCCCCcEEEEEEeccCCcccccccccceEEEEEecCCCEEEEEECCC
Confidence 3457799999999999998754 678999998632 222 111 0 111 235799988655567889999999
Q ss_pred CCCCCEEEEEeecCC-----CCeeEEEEeceec
Q psy14080 81 QKRDNGTYECQAQPY-----TTTSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~-----~~~s~~~~L~V~g 108 (113)
+.+|+|.|+|.+... ......+.|.|.+
T Consensus 89 ~~~DsG~Y~C~~~~~~~~~~~~~~~~~~L~V~~ 121 (256)
T 3umt_A 89 TSEDSAVYYCARDDRYPAWFAYWGQGTTVTVSS 121 (256)
T ss_dssp CGGGCEEEEEEECCSTTCCSCEECCCEEEEECC
T ss_pred CcccCEEEEEEEccCCCccccEECCCEEEEEcC
Confidence 999999999999643 2234456777765
No 201
>1pz5_B Heavy chain of FAB (SYA/J6); antibody-antigen structure, peptide-carbohydrate mimicry, VA design, immune system; 1.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1m7d_B* 1m71_B* 1m7i_B* 1r24_B 1uz6_F 1uz8_B* 1clz_H*
Probab=99.63 E-value=2.8e-15 Score=102.56 Aligned_cols=95 Identities=15% Similarity=0.148 Sum_probs=67.1
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---e-EEEecc------eEEc--CCCCEEEEEeCCCCcEEEEEc
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---H-ILTSGV------LTYT--NDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~-~l~~~~------~~~~--~~~R~~~~~~~~~~~~~L~I~ 78 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+..+ . ++.... .... ..+||.+..+...+.++|+|.
T Consensus 7 p~~~~~~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 86 (220)
T 1pz5_B 7 SGGGLVQPGGSMKLSCVASGFTFSNYWMEWVRQSPEKGLEWVAEIRLKSNNYATHYAESVKGRFTISRDDSKSSVYLQMN 86 (220)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEEETTTEEEEEEEECCGGGTTCEEECGGGTTTEEEEEEGGGTEEEEEEC
T ss_pred cCCEEEcCCCeEEEEEEEcCCccCCccEEEEEeCCCCCcEEEEEEEcCCCccccccCcccCCcEEEEEeCCCCeEEEEEc
Confidence 4567899999999999998765 689999998632 1 222111 1111 147999876444567899999
Q ss_pred cCCCCCCEEEEEeecCCC----CeeEEEEecee
Q psy14080 79 FLQKRDNGTYECQAQPYT----TTSHSQNAPGL 107 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~----~~s~~~~L~V~ 107 (113)
+++.+|+|.|+|.+...+ .....+.|.|.
T Consensus 87 ~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~ 119 (220)
T 1pz5_B 87 NLRAEDTGIYYCTRGGAVGAMDYWGQGTSVTVS 119 (220)
T ss_dssp SCCGGGCEEEEEEEECTTSSEEEECCCEEEEEC
T ss_pred cCCHHHCEEEEEEEecCCcccceECCCEEEEEc
Confidence 999999999999996543 11234566665
No 202
>3bn9_D E2 FAB heavy chain; antibody-protease complex, protein-protein complex, enzyme- inhibitor complex, disease mutation, glycoprotein, hydrolase; 2.17A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 3kr3_H 2xtj_E
Probab=99.63 E-value=2.8e-15 Score=106.60 Aligned_cols=83 Identities=16% Similarity=0.177 Sum_probs=62.5
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eec----ceEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSG----VLTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~----~~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ ... ...+ ...+||.+..+...+.++|+|+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (257)
T 3bn9_D 7 SGGGLVKPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMSSL 86 (257)
T ss_dssp ECCEEECTTCEEEEEEEEESSCGGGCCEEEEEECTTSCEEEEEEECSSSCCEEECGGGTTTEEEEEETTTTEEEEEEESC
T ss_pred cCCEEEcCCCcEEEEEEeccccCCCceEEEEEECCCCCeEEEEEEecCCCceecCcccCCceEEEecCCCCEEEEEECCC
Confidence 4457899999999999998754 578999998732 222 221 1111 125799988665567899999999
Q ss_pred CCCCCEEEEEeecCC
Q psy14080 81 QKRDNGTYECQAQPY 95 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~ 95 (113)
+.+|+|+|+|++...
T Consensus 87 ~~~DsG~Y~C~~~~~ 101 (257)
T 3bn9_D 87 RAEDTAVYYCARPYL 101 (257)
T ss_dssp CGGGCEEEEEEEECC
T ss_pred ChhhCEEEEEEEecC
Confidence 999999999999653
No 203
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.63 E-value=5.1e-15 Score=103.46 Aligned_cols=98 Identities=12% Similarity=0.060 Sum_probs=69.9
Q ss_pred eecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eec---c-eEE--cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSG---V-LTY--TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~---~-~~~--~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
.....+++.+|++|+|+|.+.+.+ .+.|.|||+.+. ..+ ... . ... ..++||.+..+...+.++|+|.
T Consensus 6 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 85 (253)
T 3uzq_A 6 EQSGAELVKPGASVRLSCTASGFNIKDTYMSWVKQRPEQGLEWIGRIDPANGDTKYDPKFQGKATITADTSSNTAYLHLS 85 (253)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ecCCCeeecCCCcEEEEEEeeCCcccCceEEEEEeCCCCCCEEEEEEccCCCcceeCCcCCCcEEEEeecCCCeEEEEeC
Confidence 344567899999999999998743 679999997632 222 111 0 111 2357999887666778999999
Q ss_pred cCCCCCCEEEEEeecCCC-C-eeEEEEeceec
Q psy14080 79 FLQKRDNGTYECQAQPYT-T-TSHSQNAPGLG 108 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~-~-~s~~~~L~V~g 108 (113)
+++.+|+|.|+|.+.... . ....+.|.|.+
T Consensus 86 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~l~V~~ 117 (253)
T 3uzq_A 86 SLTSGDTAVYYCSRGWEGFAYWGQGTLVTVSA 117 (253)
T ss_dssp SCCGGGCEEEEEEECSSSCCEECCCEEEEECS
T ss_pred CCCcccCEEEEEEEeeCCccEECCCcEEEEec
Confidence 999999999999996532 2 23456677764
No 204
>3osk_A Cytotoxic T-lymphocyte protein 4; beta sandwich, homodimer, immunoglobulin superfamily (beta S fold, receptor, signalling, B7-1(CD80), B7-2(CD86); HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 PDB: 2x44_D 1i85_C 1ah1_A* 1i8l_C* 3bx7_C
Probab=99.62 E-value=1.6e-15 Score=97.99 Aligned_cols=94 Identities=15% Similarity=0.053 Sum_probs=65.6
Q ss_pred eEEEecCCcEEEEEEEccCC---CCEEEEEecCCCe---EEE--e-cceE-EcCCCC-EEEEEeCCCCcEEEEEccCCCC
Q psy14080 15 ISTGFLAVFSYSDKTVRDIV---KVRVSWVRRRDWH---ILT--S-GVLT-YTNDAR-FQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~---~~~V~W~k~~~~~---~l~--~-~~~~-~~~~~R-~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.+++.+|++|+|+|.++... ...|.|||+..+. ++. . .... ....+| |.... +++.++|+|++++.+
T Consensus 10 ~~~~~~G~~vtL~C~~s~~~~~~~~~v~Wyrq~~g~~~~~l~~~~~~~~~~~~~~~r~f~~~~--~~~~~sL~I~~l~~~ 87 (130)
T 3osk_A 10 VVLASSRGIASFVCEYASPGKATEVRVTVLRQADSQVTEVCAATYMMGNELTFLDDSICTGTS--SGNQVNLTIQGLRAM 87 (130)
T ss_dssp EEECCTTSCEEEEEEECCCSSCCEEEEEEEEEETTEEEEEEEEEEETTSCCCCCSCCSEEEEE--ETTEEEEEECSCCGG
T ss_pred EEEEeCCCeEEEEEEecCCCCCceEEEEEEEeCCCCCcEEEEEEEcCCCceeeecceEEeccC--CCCEEEEEEcCCChH
Confidence 68899999999999998653 3479999997532 332 2 1111 112456 76653 457899999999999
Q ss_pred CCEEEEEeecCC---CC---eeEEEEeceeccc
Q psy14080 84 DNGTYECQAQPY---TT---TSHSQNAPGLGDL 110 (113)
Q Consensus 84 D~G~Y~C~~~~~---~~---~s~~~~L~V~g~~ 110 (113)
|+|+|+|++... +. .-....|.|+++.
T Consensus 88 Dsg~Y~C~~~~~~~~~~~~~fg~GT~L~V~~~~ 120 (130)
T 3osk_A 88 DTGLYICKVELMYPPPYYLGIGNGTQIYVIDPE 120 (130)
T ss_dssp GCEEEEEEEEEEESSSCEEEECCCEEEECCCCC
T ss_pred HCEEEEEEEEeccCCchhcccCCCEEEEEeccC
Confidence 999999999531 11 2345677777654
No 205
>2e6p_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.62 E-value=1.5e-15 Score=93.37 Aligned_cols=90 Identities=10% Similarity=0.035 Sum_probs=64.4
Q ss_pred CCceeeEeecc--eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 4 APGGILTAFGQ--ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 4 ~p~~i~~~~~~--~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
+|+.++..-.. ++++.+|++++|.|.+.+.+.+ |.|||.. ..+ ..+.|+.+.. +....+|.|.+++
T Consensus 6 ~~P~~~~~p~~~~~~~v~~G~~v~l~C~~~~~p~~-v~W~k~g--~~~-------~~~~~~~~~~--~~~~~~L~I~~~~ 73 (104)
T 2e6p_A 6 SGPVHILSPQDKVSLTFTTSERVVLTCELSRVDFP-ATWYKDG--QKV-------EESELLVVKM--DGRKHRLILPEAK 73 (104)
T ss_dssp SSSCCCCBCCSCEEEEEESSSCEECCEECSSTTCC-CEEEETT--EEC-------CCBTTBEEEE--ETTEEEEEESSCC
T ss_pred CCCCEEECCCCCccEEEeCCCcEEEEEEecCCCCc-cEEeeCC--EEC-------CCCCCEEEEe--CCCEEEEEECCCC
Confidence 34444443322 2789999999999999988877 9999843 222 2356777763 3456799999999
Q ss_pred CCCCEEEEEeecCCCCeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~~~s~~~~L~V~g 108 (113)
.+|+|.|+|.+... +..+.|.|.+
T Consensus 74 ~~D~G~Y~C~a~n~---~~~~~l~V~~ 97 (104)
T 2e6p_A 74 VQDSGEFECRTEGV---SAFFGVTVQD 97 (104)
T ss_dssp TTTCEEEEEECSSC---CCCEEEEEEC
T ss_pred hhhCEEEEEEECCc---eEEEEEEEcC
Confidence 99999999999653 2245666654
No 206
>3iu4_H CHP3 FAB heavy chain; antibody, ganglioside, idiotype, immune system; 1.75A {Mus musculus} PDB: 1ibg_H* 3iy6_B
Probab=99.62 E-value=1.3e-15 Score=108.37 Aligned_cols=82 Identities=17% Similarity=0.136 Sum_probs=61.3
Q ss_pred ceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeE-EEecce---EE--cCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHI-LTSGVL---TY--TNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~-l~~~~~---~~--~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
..+++.+|++|+|+|.+++.. ...|.|||+.. ... +..... .. ..++||.+..+...++++|+|++++.
T Consensus 8 ~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~~ 87 (263)
T 3iu4_H 8 GPGLVAPSQSLSITCTVSGFSLSRYSVHWVRQPPGKGLEWLGMIWGGGSTDYNSALKSRLSISKDNSKSQVFLKMNSLQT 87 (263)
T ss_dssp CCSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEECTTSCEEECGGGTTCEEEEEEGGGTEEEEEECSCCG
T ss_pred CCEEEcCCCCEEEEEEeccccCCceEEEEEEECCCCCcEEEEEEeCCCcEeeCcccCCCEEEEecCCCCEEEEEECCCCH
Confidence 357899999999999997532 56899999863 222 222110 11 12589999866666789999999999
Q ss_pred CCCEEEEEeecCC
Q psy14080 83 RDNGTYECQAQPY 95 (113)
Q Consensus 83 ~D~G~Y~C~~~~~ 95 (113)
+|+|+|+|++...
T Consensus 88 ~DsG~Y~C~~~~~ 100 (263)
T 3iu4_H 88 DDTAMYYCARSGV 100 (263)
T ss_dssp GGCEEEEEEEEEC
T ss_pred HHCEEEEEEEEeC
Confidence 9999999999643
No 207
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.62 E-value=4.8e-15 Score=102.96 Aligned_cols=98 Identities=15% Similarity=0.122 Sum_probs=69.9
Q ss_pred eEeecceEEEecCCcEEEEEEEccCC-----CCEEEEEecCCC---eEEEecceEEc--CCCCEEEEEeCCCCcEEEEEc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIV-----KVRVSWVRRRDW---HILTSGVLTYT--NDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~-----~~~V~W~k~~~~---~~l~~~~~~~~--~~~R~~~~~~~~~~~~~L~I~ 78 (113)
+++.+..+++.+|++|+|+|.+.+.+ .+.|.|||+.++ ..+........ .++||.+.. +.+.++|+|.
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~ 81 (247)
T 1svz_A 4 MTQTPLYLPVSLGDQASISCRSSQTIVHNNGNTYLEWYLQKPGQSPQLLIYKVSNRFSGVPDRFSGSG--SGTDFTLKIS 81 (247)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEES
T ss_pred EEecCCeEEecCCCCEEEEEeCCCcccccCCCceEEEEEECCCCCceEEEEEecccCCCCCCcEEecc--CCCEEEEEEC
Confidence 35566788999999999999998876 689999997632 22322211111 257998863 4567899999
Q ss_pred cCCCCCCEEEEEeecCCCC--eeEEEEeceec
Q psy14080 79 FLQKRDNGTYECQAQPYTT--TSHSQNAPGLG 108 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~~--~s~~~~L~V~g 108 (113)
+++.+|+|.|+|.+..... .+..+.|.|.+
T Consensus 82 ~v~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~ 113 (247)
T 1svz_A 82 RVEAEDLGIYYCFQGSHFPPTFGGGTKLEIKG 113 (247)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CCCHHHCEEEEEEEccCCccEECCCEEEEEEC
Confidence 9999999999999965322 33345677765
No 208
>1c1e_H Catalytic antibody 1E9 (heavy chain); diels-alder, immunoglobulin, immune system; HET: ENH; 1.90A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1dbb_H* 1dba_H* 1dbj_H* 1dbk_H* 1dbm_H* 2dbl_H* 3ojd_B 1jgl_H* 1jhk_H 1ghf_H 1tet_H* 3e8u_H 1fj1_B 1cl7_H
Probab=99.62 E-value=3.2e-15 Score=102.03 Aligned_cols=96 Identities=14% Similarity=0.106 Sum_probs=67.2
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eec----ceEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSG----VLTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~----~~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ ... ...+ ..++||.+..+...+.++|+|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (219)
T 1c1e_H 7 SGPELKKPGETVKISCKASGYMFTNYGMNWVKQAPGKALKLMGWINPYTGESTFADDFKGRFAFFLETSATTAYLQINNL 86 (219)
T ss_dssp CCCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCEEEEEEECSSSCCEEECGGGCSSEEEEEEGGGTEEEEEECSC
T ss_pred CCCeEecCCCcEEEEEEEeCcccccceEEEEEeCCCCCcEEEEEEecCCCceEeCcccCCcEEEEEecCCCEEEEEECCC
Confidence 4567899999999999998764 678999998522 111 111 1111 125799987644456789999999
Q ss_pred CCCCCEEEEEeecCCC-----CeeEEEEeceec
Q psy14080 81 QKRDNGTYECQAQPYT-----TTSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~-----~~s~~~~L~V~g 108 (113)
+.+|+|.|+|.+.... .....+.|.|.+
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 119 (219)
T 1c1e_H 87 KNEDMATYFCARGTTIVRAMDYWGQGTSLTVSS 119 (219)
T ss_dssp CGGGCEEEEEEEEETTTTEEEEECCCEEEEECC
T ss_pred CcccCEEEEEEEeccCcccceeecCceEEEEec
Confidence 9999999999996533 222345666665
No 209
>3qhz_H Human monoclonal antibody DEL2D1, FAB heavy chain; immunoglobulin, immune recognition, influenza A hemagglutini system; 1.55A {Homo sapiens} PDB: 3lzf_H* 3qrg_H* 3mod_H 3mob_H 3moa_H 3lev_H* 3idg_B 3d0l_B 3d0v_B 3idi_B 3idj_B 3idm_B* 3idn_B* 1tjg_H* 1tjh_H* 1tji_H* 2pr4_H 3drq_B 2p8m_B 2p8p_B ...
Probab=99.62 E-value=1.9e-15 Score=104.56 Aligned_cols=84 Identities=14% Similarity=0.134 Sum_probs=60.2
Q ss_pred ecceEEEecCCcEEEEEEEccC--CCCEE--EEEecCC---CeEE-Ee---cc--e-EE--cCCCCEEEEEeCCCCcEEE
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDI--VKVRV--SWVRRRD---WHIL-TS---GV--L-TY--TNDARFQVIHTDGSDDWNL 75 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~--~~~~V--~W~k~~~---~~~l-~~---~~--~-~~--~~~~R~~~~~~~~~~~~~L 75 (113)
....+++.+|++|+|+|.+++. ....+ .|||+.. ...+ .. +. . .. ...+||.+..+...++++|
T Consensus 6 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~i~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL 85 (232)
T 3qhz_H 6 ESGPALVKPTQTLTLTCSFSGFSLSTSGMSVSWIRQPPGKALEWLALIDWDDDTYYITYSSSLKTRLTISKDTSKSQVVL 85 (232)
T ss_dssp EECCSEECTTSCEEEEEEEESCGGGCTTCEEEEEEECTTSCCEEEEEEESSSSCEEECCCTTTTTTEEEEEETTTTEEEE
T ss_pred cCCCEEECCCCcEEEEEEEeCcccccceeEeEEEEECCCCCcEEEEEEECCCCccccccCccccCceEEEeccCCCEEEE
Confidence 3445789999999999999753 22344 9999863 2222 21 11 1 11 1247999987666789999
Q ss_pred EEccCCCCCCEEEEEeecCC
Q psy14080 76 QIKFLQKRDNGTYECQAQPY 95 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~~~~ 95 (113)
+|.+++.+|+|+|+|++...
T Consensus 86 ~I~~v~~~DsG~Y~C~~~~~ 105 (232)
T 3qhz_H 86 TMTNMDPVDTATYYCARTLR 105 (232)
T ss_dssp EECSCCGGGCEEEEEEEECC
T ss_pred EECcCChhhCEEEEEEEeec
Confidence 99999999999999999643
No 210
>3liz_H 4C3 monoclonal antibody heavy chain; hydrolase-immune system complex; HET: NAG BMA MAN; 1.80A {Mus musculus} PDB: 3rvv_D* 3rvu_D 3rvt_D* 3rvw_D* 3rvx_D 1lo4_H 1ub6_H 3r06_B 3r08_H
Probab=99.62 E-value=1.8e-15 Score=106.36 Aligned_cols=96 Identities=16% Similarity=0.133 Sum_probs=67.5
Q ss_pred ecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eec---ce-EE--cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSG---VL-TY--TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~---~~-~~--~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
....+++.+|++|+|+|.+++. ....|.|||+..+ ..+ ... .. .. ...+||.+..+...++++|+|++
T Consensus 6 ~p~~v~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 85 (253)
T 3liz_H 6 ESGGGLVQPGGSLKLSCAASGFTFSSFAMSWGRQTPDKRLELVATINSNGASTYYPDTVKGRFTISRDNAKNTLFLQMSS 85 (253)
T ss_dssp EECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEECCTTTTTTCEEEEEGGGTEEEEEECS
T ss_pred cCCCEEECCCCcEEEEEEeeCccccCceEEEEEECCCCCcEEEEEEecCCCccccCcccCCcEEEEEeCCCCEEEEEECC
Confidence 3456789999999999999763 3578999998632 222 211 11 11 12479998866556789999999
Q ss_pred CCCCCCEEEEEeecCC-----CCeeEEEEecee
Q psy14080 80 LQKRDNGTYECQAQPY-----TTTSHSQNAPGL 107 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~-----~~~s~~~~L~V~ 107 (113)
++.+|+|+|+|.+... ......+.|.|.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~l~V~ 118 (253)
T 3liz_H 86 LKSEDTAMYYCTRDPAGRAWFAYWGQGTLVTVS 118 (253)
T ss_dssp CCGGGCEEEEEEECCBTTTBCCEECCCEEEEEC
T ss_pred CChhhCEEEEEEEecCCcceeeEECCCEEEEEe
Confidence 9999999999999643 123344566665
No 211
>3d9a_H Heavy chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_H 1gpo_H 3ks0_H* 1dqd_H 1ndm_B 1nak_H 1dqq_B 1dqm_H 1dqj_B 1nby_B 1nbz_B 1xgu_B 1ndg_B 1xgt_B 1xgp_B 1xgq_B 1xgr_B 1s5i_H 1f8t_H 1f90_H ...
Probab=99.62 E-value=3.1e-15 Score=101.63 Aligned_cols=95 Identities=13% Similarity=0.063 Sum_probs=66.1
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---e-EEEec---ceEE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---H-ILTSG---VLTY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~-~l~~~---~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+..+ . ++... .... ...+||.+..+...++++|+|.+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 86 (210)
T 3d9a_H 7 SGPSLVKPSQTLSLTCSVTGDSITSDYWSWIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVT 86 (210)
T ss_dssp ESCSEECTTSCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCEEECGGGTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CCCEEecCCCcEEEEEEEecccCCCCcEEEEEeCCCCCcEEEEEEcCCCCeEECcccCceEEEEecCCCCEEEEEECCCC
Confidence 4567899999999999998764 478999997532 1 12211 1111 1257999875444467899999999
Q ss_pred CCCCEEEEEeecCCCCeeEEEEecee
Q psy14080 82 KRDNGTYECQAQPYTTTSHSQNAPGL 107 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~~~s~~~~L~V~ 107 (113)
.+|+|.|+|.+.........+.|.|.
T Consensus 87 ~~D~G~Y~C~~~~~~~~~~~~~l~V~ 112 (210)
T 3d9a_H 87 TEDTATYYCANWDGDYWGQGTLVTVS 112 (210)
T ss_dssp GGGCEEEEEEETTSSCBCCCEEEEEC
T ss_pred cccCEEEEEEEecCcccccceEEEec
Confidence 99999999999654333333566665
No 212
>2ckn_A Basic fibroblast growth factor receptor 1; kinase, transferase, heparin-binding, nucleotide-binding, immunoglobulin domain, alternatice splicing; NMR {Mus musculus}
Probab=99.62 E-value=2e-15 Score=91.82 Aligned_cols=85 Identities=16% Similarity=0.189 Sum_probs=64.6
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+. .....+++.+|+++.|.|.+.+.+ +.|.|+|. +..+ ..+.|+.+. +.+|.|.+++.+|
T Consensus 9 pp~~~-~~~~~~~v~~G~~v~l~C~~~g~p-p~i~W~k~--g~~~-------~~~~~~~~~------~~~L~i~~~~~~D 71 (95)
T 2ckn_A 9 PWGVP-VEVESLLVHPGDLLQLRCRLRDDV-QSINWLRD--GVQL-------VESNRTRIT------GEEVEVRDSIPAD 71 (95)
T ss_dssp SCCBT-TBBCCEEECTTSCEEEECCEESSC-CEEEEEBT--TBCC-------CCCSSEEEC------SSEEEESSCCGGG
T ss_pred CCEEE-cCcceEEEcCCCeEEEEEECCCCC-CceEEEEC--CEec-------CCCCCEEEe------CCEEEECCCChHH
Confidence 33433 345678999999999999999887 79999983 2222 135677653 4489999999999
Q ss_pred CEEEEEeec-CCCCeeEEEEece
Q psy14080 85 NGTYECQAQ-PYTTTSHSQNAPG 106 (113)
Q Consensus 85 ~G~Y~C~~~-~~~~~s~~~~L~V 106 (113)
+|.|.|.+. ..+..+..+.|.|
T Consensus 72 ~G~Y~C~a~n~~g~~~~~~~l~V 94 (95)
T 2ckn_A 72 SGLYACVTSSPSGSDTTYFSVNV 94 (95)
T ss_dssp SEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEEEEEEeccCCCcEEEEEEEEE
Confidence 999999994 5567777788776
No 213
>4dzb_B Vbeta2 (MAIT T cell receptor); immune system; 1.70A {Homo sapiens} PDB: 1ymm_E* 3o4l_E* 3o6f_D 3t0e_D 1ktk_E 3mfg_B 2ij0_E
Probab=99.62 E-value=6.4e-15 Score=102.13 Aligned_cols=98 Identities=14% Similarity=0.145 Sum_probs=69.8
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEE-ec--c-eEEcC---CCCEEEEEeCCCCcEEEEEcc
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILT-SG--V-LTYTN---DARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~-~~--~-~~~~~---~~R~~~~~~~~~~~~~L~I~~ 79 (113)
++....+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+. .. . ..... .+||.+..+ ..+.++|+|.+
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~~L~I~~ 83 (246)
T 4dzb_B 5 SQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHA-SLTLSTLTVTS 83 (246)
T ss_dssp EEECSEEEEETTSCEEEEEEESSSCCCSEEEEEECTTSCCEEEEEECTTSCCEECTTCCGGGEEEEEE-ETTEEEEEECS
T ss_pred EECCcEEEEeCCCcEEEEeEecCCCceEEEEEEECCCCCcEEEEEEccCCCceecCcccCCcEEEEec-CCCEEEEEECC
Confidence 455667899999999999999998889999999753 22222 21 1 11111 279988753 35688999999
Q ss_pred CCCCCCEEEEEeecCC-----CCeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQPY-----TTTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~-----~~~s~~~~L~V~g 108 (113)
++.+|+|.|+|.+... ......+.|.|.+
T Consensus 84 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 117 (246)
T 4dzb_B 84 AHPEDSSFYICSARTSGDFGEQFFGPGTRLTVLE 117 (246)
T ss_dssp CCGGGCEEEEEEECCSSGGGCCEECCCEEEEEES
T ss_pred CCHHHCEEEEEEEecCCCCcceEEcCCEEEEEec
Confidence 9999999999999632 1233445666664
No 214
>3caf_A Fibroblast growth factor receptor 2; FGFR2, D2, ATP-binding, disease MU ectodermal dysplasia, glycoprotein, heparin-binding, immuno domain, kinase; 1.96A {Homo sapiens} PDB: 3cu1_A* 3euu_A 3dar_A 1wvz_A
Probab=99.61 E-value=1.5e-15 Score=92.58 Aligned_cols=85 Identities=13% Similarity=0.231 Sum_probs=63.1
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
.+.+++.+|++++|.|.+.+.+.+.|.|+|.. ..+..+. ...++... .+..+|.|.+++.+|+|.|+|.+
T Consensus 15 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~--~~~~~~~----~~~~~~~~----~~~~~L~i~~v~~~D~G~Y~C~a 84 (100)
T 3caf_A 15 KRLHAVPAANTVKFRCPAGGNPMPTMRWLKNG--KEFKQEH----RIGGYKVR----NQHWSLIMESVVPSDKGNYTCVV 84 (100)
T ss_dssp CCEEEECTTCCEEEECCEEEESCCEEEEEETT--EECCGGG----STTCCEEE----GGGTEEEECSCCGGGCEEEEEEE
T ss_pred ccEEEecCCCEEEEEEEccccCCCEEEEEECC--EEccccc----ccccEEEe----cCeEEEEEccCCcCCCEEEEEEE
Confidence 45688999999999999998888999999843 2222110 11233433 24569999999999999999999
Q ss_pred -cCCCCeeEEEEecee
Q psy14080 93 -QPYTTTSHSQNAPGL 107 (113)
Q Consensus 93 -~~~~~~s~~~~L~V~ 107 (113)
+..+..+..+.|.|+
T Consensus 85 ~N~~g~~~~~~~l~Vv 100 (100)
T 3caf_A 85 ENEYGSINHTYHLDVV 100 (100)
T ss_dssp EETTEEEEEEEEEEEC
T ss_pred EeCCCEEEEEEEEEEC
Confidence 455677788888774
No 215
>2dku_A KIAA1556 protein; beta-sandwich, IG-fold, obscurin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.61 E-value=2.8e-15 Score=92.00 Aligned_cols=89 Identities=16% Similarity=0.069 Sum_probs=65.7
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+ ....+++++.+|++++|.|.+ +.+.+.|.|+|... .+ ..+.||.+.. +....+|.|.+++.+|
T Consensus 8 pp~~-~~~~~~~~v~~G~~v~l~C~~-~~p~~~v~W~k~~~--~l-------~~~~~~~~~~--~~~~~~L~I~~v~~~D 74 (103)
T 2dku_A 8 ANCF-TEELTNLQVEEKGTAVFTCKT-EHPAATVTWRKGLL--EL-------RASGKHQPSQ--EGLTLRLTISALEKAD 74 (103)
T ss_dssp CCCC-SSCCCCEEEETTSEEEEEEEC-SSCCSCCEEEESSC--BC-------CSSSSEEEEE--ETTEEEEEEESCCTTT
T ss_pred CCEe-EecCCcEEEeCCCcEEEEEEe-CCCCCeEEEEeCCE--EC-------CCCCeEEEEe--CCCEEEEEECCCCccc
Confidence 4443 344467899999999999995 66778999998542 11 2356888763 3456799999999999
Q ss_pred CEEEEEeecCCCCeeEEEEeceecc
Q psy14080 85 NGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|. .+..+..+.|.|.+.
T Consensus 75 ~G~Y~C~---~g~~~~~~~l~V~~~ 96 (103)
T 2dku_A 75 SDTYTCD---IGQAQSRAQLLVQGR 96 (103)
T ss_dssp CSEEEEE---CSSCBCCEEEEEECS
T ss_pred CEEEEEE---eCCceEEEEEEEeCc
Confidence 9999998 344455678888764
No 216
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.61 E-value=1.5e-15 Score=106.46 Aligned_cols=100 Identities=7% Similarity=-0.006 Sum_probs=60.5
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEE-ec--c--eEEc--CCCCEEEEEeCCCCcEEEEEcc
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILT-SG--V--LTYT--NDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~-~~--~--~~~~--~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
++....+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+. .. . .... -.+|+....+...+.++|+|++
T Consensus 6 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 85 (259)
T 3omz_A 6 EGRTKSVIRQTGSSAEITCDLAEGSTGYIHWYLHQEGKAPQRLLYYDSYTSSVVLESGISPGKYDTYGSTRKNLRMILRN 85 (259)
T ss_dssp -----CEEEETTCCEEEECCC-----CEEEEEEECTTSCCEEEEEEETTTCCEEECTTCCBTTEEEECC--CCCEEEESS
T ss_pred ccCCceeEecCCCcEEEEEEEccCCCcEEEEEEECCCCCcEEEEEEecCcCccccCCCCCcceeEeecCCCCeEEEEECC
Confidence 344567899999999999999988888999999753 22222 21 0 1111 1235554444556788999999
Q ss_pred CCCCCCEEEEEeecCCC----CeeEEEEeceecc
Q psy14080 80 LQKRDNGTYECQAQPYT----TTSHSQNAPGLGD 109 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~----~~s~~~~L~V~g~ 109 (113)
++++|+|.|+|++.... .....+.|.|.+.
T Consensus 86 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 119 (259)
T 3omz_A 86 LIENDSGVYYCATWDQNYYKKLFGSGTSLVVTDK 119 (259)
T ss_dssp CCGGGCEEEEEEEECTTSSCEEECCCEEEEEEC-
T ss_pred CCcccCEEEEEEEeeCCccccEECCCCEEEEecC
Confidence 99999999999996432 2344566777653
No 217
>3bae_H WO2 IGG2A FAB fragment heavy chain; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} SCOP: b.1.1.2 PDB: 3bkc_H 3bkj_H 3bkm_H 3mck_H 2r0w_H* 2iqa_H 2iq9_H 1ggi_H 1ggb_H 1ggc_H 3eys_H* 2ipt_H 2ipu_H 3eyu_H* 2r0z_H* 3rkd_H 1r0a_H* 1n5y_H* 1n6q_H* 1t03_H* ...
Probab=99.61 E-value=3.7e-15 Score=103.01 Aligned_cols=82 Identities=17% Similarity=0.169 Sum_probs=61.4
Q ss_pred cceEEEecCCcEEEEEEEccCCC----CEEEEEecCC---CeEE-Eec---ceEEc--CCCCEEEEEeCCCCcEEEEEcc
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVK----VRVSWVRRRD---WHIL-TSG---VLTYT--NDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~----~~V~W~k~~~---~~~l-~~~---~~~~~--~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
+..+++.+|++|+|+|.+.+.+. +.|.|||+.. ...+ ... ...+. ..+||.+..+...++++|+|++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (228)
T 3bae_H 7 SGPGLLKPSQTLSLTCSFSGFSIRTSKVGVSWIRQPSGKGLEWLAHIYWDDDKRYNPSLESRLTISKDTSRDMVFMKITS 86 (228)
T ss_dssp ECCSEECTTCCEEEEEEEESSCHHHHCCEEEEEEEETTCCCEEEEEECTTSCEEECTTTGGGEEEEEETTTTEEEEEECS
T ss_pred CCceeecCCCeEEEEEEEeCcccCCCceeEEEEEECCCCCeEEEEEEecCCceeeCcccCCcEEEEEcCCCCeEEEEEcC
Confidence 45678999999999999997653 7899999863 2222 221 11111 2469998765555679999999
Q ss_pred CCCCCCEEEEEeecC
Q psy14080 80 LQKRDNGTYECQAQP 94 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~ 94 (113)
++.+|+|.|+|++..
T Consensus 87 v~~~D~G~Y~C~~~~ 101 (228)
T 3bae_H 87 VDTADTATYYCARRG 101 (228)
T ss_dssp CCGGGCEEEEEEEEE
T ss_pred CCcccCEEEEEEEec
Confidence 999999999999964
No 218
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.61 E-value=8.4e-15 Score=102.01 Aligned_cols=98 Identities=14% Similarity=0.058 Sum_probs=70.2
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
+++.+..+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+....... ..++||.+.. +.+.++|+|.+++.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~ 81 (242)
T 2znx_A 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHXYQQKSHESPRLLIKYASQSISGIPSRFSGSG--SGTDFTLSINSVETE 81 (242)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESSCCGG
T ss_pred EEEcCCeEEEcCCCcEEEEEEeCCCCCceEEEEEeCCCCCceEEEEeccccCCCCCCCEEEec--CCCEEEEEECCCChH
Confidence 3556677899999999999999988888999999763 23332211111 1257998863 346789999999999
Q ss_pred CCEEEEEeecCCCC--eeEEEEeceec
Q psy14080 84 DNGTYECQAQPYTT--TSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~~~~~--~s~~~~L~V~g 108 (113)
|+|.|+|.+..... .+..+.|.|.+
T Consensus 82 D~G~Y~C~~~n~~~~~~~~~~~L~V~~ 108 (242)
T 2znx_A 82 DFGMYFCQQSNSXPYTFGGGTKLEITG 108 (242)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred HCEEEEEeEecCCceEECCCEEEEEcC
Confidence 99999999965422 23345676665
No 219
>3sob_H Antibody heavy chain, low-density lipoprotein receptor-related protein; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_B 3uls_H 3ulu_D* 3ulv_D*
Probab=99.61 E-value=3.1e-15 Score=105.24 Aligned_cols=81 Identities=15% Similarity=0.154 Sum_probs=60.7
Q ss_pred ceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eecc---e-EE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSGV---L-TY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~~---~-~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
..+++.+|++|+|+|.+++. ....|.|||+... ..+ .... . .. ...+||.+..+...++++|+|++++
T Consensus 31 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (256)
T 3sob_H 31 GGGLVQPGGSLRLSCAASGFTFTNSYIHWVRQAPGKGLEWVGWITPYGGYTNYADSVKGRFTISADTSKNTAYLQMNSLR 110 (256)
T ss_dssp CCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCCEEEEEEETTTTEEEECTTTTTTEEEEEEGGGTEEEEEECSCC
T ss_pred CcEEEcCCCCEEEEEEeeccccCCCEEEEEEECCCCCcEEEEEEecCCCceecCCCCCCcEEEEEeCCCCEEEEEECCCC
Confidence 45789999999999999753 3468999998732 222 2211 1 11 1247999987666688999999999
Q ss_pred CCCCEEEEEeecC
Q psy14080 82 KRDNGTYECQAQP 94 (113)
Q Consensus 82 ~~D~G~Y~C~~~~ 94 (113)
.+|+|+|+|++..
T Consensus 111 ~~DsG~Y~C~~~~ 123 (256)
T 3sob_H 111 AEDTAVYYCARGS 123 (256)
T ss_dssp GGGCEEEEEEEES
T ss_pred cccCEEEEEEEec
Confidence 9999999999965
No 220
>2pnd_A V-SET and immunoglobulin domain containing 4; complement receptor, IG-like domain, immune system; 1.00A {Mus musculus} PDB: 2icc_A 2ice_S* 2icf_S*
Probab=99.61 E-value=2.5e-15 Score=95.19 Aligned_cols=94 Identities=20% Similarity=0.147 Sum_probs=62.9
Q ss_pred cceEEEecCCcEEEEEEEccCCC---CEEEEEecCCC--e-EEEe-cceEEc----CCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVK---VRVSWVRRRDW--H-ILTS-GVLTYT----NDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~---~~V~W~k~~~~--~-~l~~-~~~~~~----~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
...+++.+|++|+|+|.++.... ..|.|||+.+. . ++.. ...... -.+|+.+.. ...++++|+|++++
T Consensus 8 ~~~v~~~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~i~~~~~~~~~~~~~~~~~R~~~~~-~~~~~~sL~I~~v~ 86 (119)
T 2pnd_A 8 PESVTGTWKGDVKIQCIYDPLRGYRQVLVKWLVRHGSDSVTIFLRDSTGDHIQQAKYRGRLKVSH-KVPGDVSLQINTLQ 86 (119)
T ss_dssp CSEEEEETTSCEEECCBCCCCTTCEEEEEEEEEEETTEEEEEEEEETTEEECCSGGGTTTEEECC-SSTTBCCEEESSCC
T ss_pred CceEEEEcCCcEEEEEEEcCCCCCCceEEEEEEeCCCCceEEEEEcCCCceeecccccCcEEEcc-CCCCCEEEEEccCC
Confidence 45688999999999999875432 25799998532 2 2322 111111 136777653 24578899999999
Q ss_pred CCCCEEEEEeecC-CC-----CeeEEEEecee
Q psy14080 82 KRDNGTYECQAQP-YT-----TTSHSQNAPGL 107 (113)
Q Consensus 82 ~~D~G~Y~C~~~~-~~-----~~s~~~~L~V~ 107 (113)
.+|+|+|+|.+.. .+ ..+..+.|.|.
T Consensus 87 ~~D~G~Y~C~v~~~~~~~~~~~~~~~~~L~V~ 118 (119)
T 2pnd_A 87 MDDRNHYTCEVTWQTPDGNQVIRDKIIELRVR 118 (119)
T ss_dssp GGGCEEEEEEEEEECTTSCEEEEEEEEEEEEE
T ss_pred cccCEEEEEEEEECcCCCCeEEEEEEEEEEEc
Confidence 9999999999943 12 22456666664
No 221
>3s96_B 3B5H10 FAB light chain; huntingtin, immune system; 1.90A {Mus musculus} PDB: 2qhr_L 3ffd_B 4dcq_A
Probab=99.61 E-value=5.7e-15 Score=100.26 Aligned_cols=96 Identities=16% Similarity=0.121 Sum_probs=68.6
Q ss_pred EeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCC---CeEEE-ecce---EEc--CCCCEEEEEeCCCCcEEEEEcc
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRD---WHILT-SGVL---TYT--NDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~---~~~l~-~~~~---~~~--~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
++.. .+++.+|++|+|+|.+.+. +.+.|.|||+.. ...+. .... ... ..+||.+.. ..++++|+|.+
T Consensus 5 ~~~p-~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~ 81 (218)
T 3s96_B 5 TQSS-SASFSLGASAKLTCTLNSQHSTYTIEWYQQQPLKPPKYVMELKKDGSHSTGDGIPDRFSGSS--SGADRYLSISN 81 (218)
T ss_dssp ECCS-EEEEETTSCEEEEEEECGGGTTCCEEEEEECTTSCCEEEEEECTTSCEEECSSCCTTEEEEE--ETTEEEEEESS
T ss_pred EeCC-cEEECCCCcEEEEEECCCCCCCcEEEEEEECCCCCeEEEEEEcccCccccCCCcccceEEec--CCceEEEEEcc
Confidence 3344 7899999999999999988 888999999752 22222 2110 111 236998864 45788999999
Q ss_pred CCCCCCEEEEEeecCC-C-----CeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQPY-T-----TTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~-~-----~~s~~~~L~V~g 108 (113)
++.+|+|.|+|.+... + ..+..+.|.|.+
T Consensus 82 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 116 (218)
T 3s96_B 82 IQPEDEAIYICGVGDTIKEQFVYVFGGGTKVTVLG 116 (218)
T ss_dssp CCGGGCEEEEEEEEEEETTEEEEEECCCEEEEEES
T ss_pred CCcccCEEEEEEEecCCCCceeEEEcCcEEEEEec
Confidence 9999999999999542 2 234456777764
No 222
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.61 E-value=2.1e-15 Score=107.63 Aligned_cols=96 Identities=13% Similarity=0.169 Sum_probs=69.6
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC----eEEEec-c--e-EE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW----HILTSG-V--L-TY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~----~~l~~~-~--~-~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.+.+. +.+.|.|||+.+. .++... . . .. ..++||.+..+...+.++|+|+++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 86 (280)
T 3fku_X 7 SGAEVKKPGSSVKVSCTSSEVTFSSFAISWVRQAPGQGLEWLGGISPMFGTPNYAQKFQGRVTITADQSTRTAYMDLRSL 86 (280)
T ss_dssp CCCCEECTTCCEEEEEEECCSCCTTSCEEECCBCSSSCCCCCEEECTTTCCEEECGGGTTTCEEEEETTTTEEEEEECSC
T ss_pred CCCEEECCCCcEEEEEEeeccCCCCeEEEEEEeCCCCCCEEEEEEeccCCccccCcccCCcEEEEEeCCCCEEEEEECCC
Confidence 677899999999999999875 4578999998632 223222 1 0 11 135799998766777899999999
Q ss_pred CCCCCEEEEEeecCC----------CCeeEEEEeceec
Q psy14080 81 QKRDNGTYECQAQPY----------TTTSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~----------~~~s~~~~L~V~g 108 (113)
+++|+|.|+|++... ......+.|.|.+
T Consensus 87 ~~~DsG~Y~C~~~~~~~~~g~~~~~~~~~~~~~L~V~~ 124 (280)
T 3fku_X 87 RSEDTAVYYCARSPSYICSGGTCVFDHWGQGTLVTVSS 124 (280)
T ss_dssp CSTTCEECCEEECSSSSSSSTTCCCCEECCCCEEEECC
T ss_pred ChhhCEEEEEEEecCCccccccccccEECCCEEEEEcC
Confidence 999999999999653 1233445666655
No 223
>4ei6_B Vbeta16 XV19 type II natural killer T cell recept variable domain, human constant...; natural killer T cell receptor, immune system; 1.60A {Mus musculus} PDB: 4ei5_D 4elk_B 4elm_F* 2esv_E 3ffc_E 3utt_E 3utp_E* 3uts_E 3qjf_B 3qjh_B 3qiw_D* 3qiu_D
Probab=99.61 E-value=8.8e-15 Score=101.38 Aligned_cols=98 Identities=10% Similarity=0.024 Sum_probs=68.3
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEE-Ee-cceEE-cC---CCCEEEEEeCCCCcEEEEEcc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HIL-TS-GVLTY-TN---DARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l-~~-~~~~~-~~---~~R~~~~~~~~~~~~~L~I~~ 79 (113)
.++....+++.+|++|+|+| ..+.+.+.|.|||+..+ ..+ .. +.... .. ++||.+.. ...++++|+|.+
T Consensus 5 v~~~p~~v~v~~G~~v~L~C-~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~sL~I~~ 82 (245)
T 4ei6_B 5 VLQIPSHQIIDMGQMVTLNC-DPVSNHLYFYWYKQILGQQMEFLVNFYNGKVMEKSKLFKDQFSVER-PDGSYFTLKIQP 82 (245)
T ss_dssp CEEECSEEEEETTCCEEEEE-ECCTTCCEEEEEEEETTTEEEEEEEEETTEEEEECTTCCTTEEEEC-CTTSCEEEEECS
T ss_pred eEeCCceEEecCCCCEEEEE-EcCCCCCEEEEEEECCCCCcEEEEEECCCceeccCCCccCCEEEEe-ccCceEEEEECC
Confidence 34556678999999999999 55667789999997532 222 21 11111 12 28999875 346789999999
Q ss_pred CCCCCCEEEEEeecC-----CCCeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQP-----YTTTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~-----~~~~s~~~~L~V~g 108 (113)
++.+|+|.|+|.+.. .......+.|.|.+
T Consensus 83 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 116 (245)
T 4ei6_B 83 TALEDSAVYFCASSFWGAYAEQFFGPGTRLTVLE 116 (245)
T ss_dssp CCGGGCEEEEEEEECSSTTCCCEECCCEEEEEES
T ss_pred CCHhHCEEEEEEEccCCCcceEEEcCCcEEEEec
Confidence 999999999999963 12334455676764
No 224
>4hwu_A Fibroblast growth factor receptor 2; FGFR2, KGFR, CD332, IG-C2 type 1 domain, IG superfamily, IMM system, structural genomics, PSI-biology; 2.90A {Mus musculus}
Probab=99.60 E-value=7.4e-15 Score=89.01 Aligned_cols=84 Identities=19% Similarity=0.124 Sum_probs=64.0
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
.....++++.+|+++.|.|.+.+ .+.|.|+|. +..+ ..+.|+.+. +.+|.|.+++.+|+|.|+
T Consensus 5 ~~~p~~~~v~~G~~~~l~C~~~~--~p~v~W~k~--g~~~-------~~~~~~~~~------~~~L~i~~~~~~D~G~Y~ 67 (95)
T 4hwu_A 5 GSQPEAYVVAPGESLELQCMLKD--AAVISWTKD--GVHL-------GPNNRTVLI------GEYLQIKGATPRDSGLYA 67 (95)
T ss_dssp ---CEEEEECTTSCEEEECCCCT--TCEEEEEET--TEEE-------CCCSSEEEE------TTEEEECSCCGGGCEEEE
T ss_pred ccCCCcEEECCCCEEEEEEEeCC--CCEEEEEEC--CEEC-------CCCceEEEe------CCEEEECcCCcccCEEEE
Confidence 34556788999999999999986 479999984 3333 235677764 348999999999999999
Q ss_pred Eeec-CCCCeeEEEEeceeccc
Q psy14080 90 CQAQ-PYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 90 C~~~-~~~~~s~~~~L~V~g~~ 110 (113)
|.+. ..+..+..+.|.|.+..
T Consensus 68 C~a~n~~g~~~~~~~l~V~~~~ 89 (95)
T 4hwu_A 68 CTAARTVDSETWIFMVNVTDAA 89 (95)
T ss_dssp EEEECSSCEEEEEEEEEECCC-
T ss_pred EEEccCCCcEEEEEEEEEeCCc
Confidence 9994 55777888899887653
No 225
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.60 E-value=1e-14 Score=103.19 Aligned_cols=98 Identities=16% Similarity=0.107 Sum_probs=70.2
Q ss_pred eEeecceEEEecCCcEEEEEEEccCC------CCEEEEEecCC---CeEEEecceEEc--CCCCEEEEEeCCCCcEEEEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIV------KVRVSWVRRRD---WHILTSGVLTYT--NDARFQVIHTDGSDDWNLQI 77 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~------~~~V~W~k~~~---~~~l~~~~~~~~--~~~R~~~~~~~~~~~~~L~I 77 (113)
+++.+..+++.+|++|+|+|.+.+.+ .+.|.|||+.. ...+........ .++||.+.. +.+.++|+|
T Consensus 8 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~R~~~~~--~~~~~~L~I 85 (264)
T 2gjj_A 8 LTQTPSSLPVSVGEKVTMTCKSSQTLLYSNNQKNYLAWYQQKPGQSPKLLISWAFTRKSGVPDRFTGSG--SGTDFTLTI 85 (264)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEE
T ss_pred eEecCCeEEecCCCcEEEEeEcCCcccccccCCceEEEEEECCCCCcEEEEEecccCCCCCCccEEEec--CCCEEEEEE
Confidence 35567788999999999999998876 57899999853 233322111111 257998864 356789999
Q ss_pred ccCCCCCCEEEEEeecCCCC--eeEEEEeceec
Q psy14080 78 KFLQKRDNGTYECQAQPYTT--TSHSQNAPGLG 108 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~~~~--~s~~~~L~V~g 108 (113)
.+++++|+|.|+|++..... ....+.|.|.+
T Consensus 86 ~~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 118 (264)
T 2gjj_A 86 GSVKAEDLAVYYCQQYSNYPWTFGGGTRLEIKR 118 (264)
T ss_dssp SSCCGGGCEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred CCCCHHHCEEEEEEEecCCccEecCCEEEEEEc
Confidence 99999999999999965322 23345677765
No 226
>2eo9_A Roundabout homolog 1; beta-sandwich, IG-fold, H-ROBO-1, deleted in U twenty twenty, neurogenesis, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.60 E-value=1.2e-15 Score=95.89 Aligned_cols=91 Identities=19% Similarity=0.166 Sum_probs=70.0
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+. ....++++.+|++++|.|.+.+.+.+.+.|||.. . .+. ..+.|+.+.. +.+|.|.+++.+|
T Consensus 8 pP~i~-~~p~~~~v~~G~~v~l~C~~~g~p~p~i~W~k~g-~-~~~------~~~~~~~~~~-----~~~L~i~~v~~~D 73 (118)
T 2eo9_A 8 PPVIR-QGPVNQTVAVDGTFVLSCVATGSPVPTILWRKDG-V-LVS------TQDSRIKQLE-----NGVLQIRYAKLGD 73 (118)
T ss_dssp SCCCS-BCCCCEEEETTCEEEEECBCCCSSCCEEEEEESS-S-BCC------TTSTTEEEEE-----TTEEEEESCCGGG
T ss_pred CCEEE-cCCCCEEEcCCCeEEEEEEEEecCCCEEEEEECC-E-ECc------CCCCeEEEcc-----CCEEEEccCCcCC
Confidence 44443 4456689999999999999998888999999843 2 221 1367887753 3389999999999
Q ss_pred CEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 85 NGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+. ..+..+..+.|.|.+.
T Consensus 74 ~G~Y~C~a~n~~g~~~~~~~l~V~~~ 99 (118)
T 2eo9_A 74 TGRYTCIASTPSGEATWSAYIEVQEF 99 (118)
T ss_dssp CCCEEEEEECSSCEEEEECCEEEECC
T ss_pred CEEEEEEEEcCCCcEEEEEEEEEEeC
Confidence 999999994 5567777888888765
No 227
>3tv3_H PGT128 heavy chain, IG gamma-1 chain C region; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_H* 3twc_H* 3tje_H* 3thm_H* 4fqq_H 2xzc_H* 2xza_H* 3b2u_H* 3b2v_H* 3mly_H 3mlz_H 4fq2_H 2ykl_H* 3tnm_H 4fqc_H* 4fq1_H* 2yk1_H* 3mlx_H 2jix_D 2vxq_H ...
Probab=99.60 E-value=3.6e-15 Score=104.09 Aligned_cols=82 Identities=12% Similarity=0.033 Sum_probs=60.9
Q ss_pred cceEEEecCCcEEEEEEEccCC----CCEEEEEecCC---CeEE-Eec--------ce-EE--cCCCCEEEEEeCCCCcE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV----KVRVSWVRRRD---WHIL-TSG--------VL-TY--TNDARFQVIHTDGSDDW 73 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~----~~~V~W~k~~~---~~~l-~~~--------~~-~~--~~~~R~~~~~~~~~~~~ 73 (113)
+..+++.+|++|+|+|.+++.+ ...|.|||+.. ...+ ... .. .. ...+||.+..+...+.+
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~ 86 (239)
T 3tv3_H 7 SGPTLVEASETLSLTCAVSGDSTAACNSFWGWVRQPPGKGLEWVGSLSHCASYWNRGWTYHNPSLKSRLTLALDTPKNLV 86 (239)
T ss_dssp ESCSEECTTSCEEEEEEEESSCTTSSSCEEEEEEECTTSCCEEEEEEECCCCTTSSCEEEECTTTGGGEEEEEEGGGTEE
T ss_pred CCCEEEcCCCCEEEEEEEcCCcccccceEEEEEEECCCCCcEEEEEEecccccccCCceecCccccCCEEEEEECCCCEE
Confidence 4467899999999999998654 45899999873 2222 111 01 11 12479998865556789
Q ss_pred EEEEccCCCCCCEEEEEeecC
Q psy14080 74 NLQIKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 74 ~L~I~~v~~~D~G~Y~C~~~~ 94 (113)
+|+|.+++.+|+|+|+|++..
T Consensus 87 ~L~I~~v~~~DsG~Y~C~~~~ 107 (239)
T 3tv3_H 87 FLKLNSVTAADTATYYCARFG 107 (239)
T ss_dssp EEEECSCCGGGCEEEEEEEEE
T ss_pred EEEECCCChhhCEEEEEEEec
Confidence 999999999999999999953
No 228
>3q5y_A TCR N15 beta; IG, T cell receptor, antigen peptide/MHC, membrane, immune S; HET: EPE; 1.90A {Mus musculus} PDB: 1nfd_B* 3q5t_A
Probab=99.60 E-value=1e-14 Score=100.92 Aligned_cols=97 Identities=12% Similarity=0.010 Sum_probs=68.4
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEe-c-ceEE---cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTS-G-VLTY---TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~-~-~~~~---~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
++....+++.+|++|+|+|.+.+ +.+.|.|||+.. ...+.. . .... ...+||.+..+ ..++++|+|.+++
T Consensus 6 ~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~-~~~~~sL~I~~v~ 83 (240)
T 3q5y_A 6 VQSPRHIIKEKGGRSVLTCIPIS-GHSNVVWYQQTLGKELKFLIQHYEKVERDKGFLPSRFSVQQF-DDYHSEMNMSALE 83 (240)
T ss_dssp EEECSEEEEETTCCEEEEEECCT-TCCEEEEEEECTTSCCEEEEEEETTEEEEECSCCTTEEEEEC-TTSCEEEEECSCC
T ss_pred ccCcceeeecCCCcEEEEEEeCC-CCceEEEEEECCCCCCEEEEEEcCCccccCcccCCeEEEEeC-CCCEEEEEECcCC
Confidence 44566789999999999999876 667999999763 222222 1 1111 12479998753 5678999999999
Q ss_pred CCCCEEEEEeecC--C--CCeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQP--Y--TTTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~--~--~~~s~~~~L~V~g 108 (113)
.+|+|.|+|.+.. . ......+.|.|.+
T Consensus 84 ~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 114 (240)
T 3q5y_A 84 LEDSAMYFCASSLRWGDEQYFGPGTRLTVLE 114 (240)
T ss_dssp GGGCEEEEEEEESSTTBCCEECCCEEEEEES
T ss_pred hhHCEEEEEEEccCCCcceEEcCCEEEEEec
Confidence 9999999999962 1 2233445666664
No 229
>3sob_L Antibody light chain; beta propeller, protein binding-immune system complex; 1.90A {Homo sapiens} PDB: 1pkq_A 3u1s_L*
Probab=99.60 E-value=1.5e-14 Score=99.11 Aligned_cols=98 Identities=19% Similarity=0.158 Sum_probs=70.1
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEe-cceE-EcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTS-GVLT-YTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~-~~~~-~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.++....+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+.. .... ...++||.+.. ..++++|+|.+++.+
T Consensus 27 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~ 104 (237)
T 3sob_L 27 MTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG--SGTDFTLTISSLQPE 104 (237)
T ss_dssp EEEECSEEEEETTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGG
T ss_pred EEeCCCeEEEeCCCcEEEEEecCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCcEEEEc--CCCEEEEEECCCChh
Confidence 3445667899999999999999988888999999763 233332 2211 12367998873 456889999999999
Q ss_pred CCEEEEEeecCCC--CeeEEEEeceec
Q psy14080 84 DNGTYECQAQPYT--TTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~~~~--~~s~~~~L~V~g 108 (113)
|+|.|+|.+.... .....+.|.|..
T Consensus 105 D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 131 (237)
T 3sob_L 105 DFATYYCQQSYTTPPTFGQGTKVEIKR 131 (237)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEEEC
T ss_pred hCeEEEEeeccCCceEEcCcEEEEEec
Confidence 9999999995432 233345566543
No 230
>3d9a_L Light chain of hyhel10 antibody fragment (FAB); lysozyme, antigen, allergen, antimic bacteriolytic enzyme, glycosidase, hydrolase; 1.20A {Mus musculus} PDB: 3hfm_L 1xgp_A 1xgq_A 1xgr_A 1xgt_A 1dqq_A 1dqm_L 1dqj_A 1nby_A 1nbz_A 1ndg_A 1ndm_A 1xgu_A 1fh5_L 1bm3_L 1opg_L 1mlb_A 1mlc_A 1rih_L 1p2c_A ...
Probab=99.60 E-value=1.5e-14 Score=97.97 Aligned_cols=98 Identities=14% Similarity=0.093 Sum_probs=69.7
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEecceEEc--CCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSGVLTYT--NDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~~~~~~--~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
+++.+..+++.+|++++|.|.+.+.+.+.|.|||+.. ...+........ ..+||.+.. +.+.++|.|.+++.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~ 81 (213)
T 3d9a_L 4 LTQSPATLSVTPGNSVSLSCRASQSIGNNLHWYQQKSHESPRLLIKYASQSISGIPSRFSGSG--SGTDFTLSINSVETE 81 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEESSCCGG
T ss_pred EEeCCccEEEeCCCcEEEEEECCCCCCCCEEEEEeCCCCCcEEEEEEcccccccccccEEEEc--CCCEEEEEECCCChh
Confidence 4555678899999999999999988878899999753 223332221111 247998864 456789999999999
Q ss_pred CCEEEEEeecCC-CC-eeEEEEeceec
Q psy14080 84 DNGTYECQAQPY-TT-TSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~~~-~~-~s~~~~L~V~g 108 (113)
|+|.|+|.+... +. ....+.|.|..
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (213)
T 3d9a_L 82 DFGMYFCQQSNSWPYTFGGGTKLEIKR 108 (213)
T ss_dssp GCEEEEEEECSSSSCEECCCEEEEECC
T ss_pred hCEEEEEeeecCCcceeCCCEEEEEec
Confidence 999999999643 22 22334566653
No 231
>3u2s_H PG9 heavy chain; greek KEY, immunoglobulin, immune recognition, immune system; HET: PCA TYS BU3 NAG BMA MAN; 1.80A {Homo sapiens} PDB: 3u4e_H* 3u36_H 3mug_B* 3lrs_H* 3mme_H* 2qsc_H*
Probab=99.60 E-value=2.7e-15 Score=105.76 Aligned_cols=82 Identities=15% Similarity=0.113 Sum_probs=60.9
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eec---ce-EE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSG---VL-TY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~---~~-~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.+++. ....|.|||+..+ ..+ ... .. .. ...+||.+..+...+.++|+|+++
T Consensus 6 ~~~v~v~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v 85 (248)
T 3u2s_H 6 SGGGVVQPGSSLRLSCAASGFDFSRQGMHWVRQAPGQGLEWVAFIKYDGSEKYHADSVWGRLSISRDNSKDTLYLQMNSL 85 (248)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCCEEEeCCCCEEEEEEeccccCCccEEEEEEECCCCCcEEEEEEecCCCceecCcccCCcEEEEecCCCCEEEEEECCC
Confidence 446789999999999999753 3568999998742 222 211 11 11 125799998665567899999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+.+|+|+|+|++..
T Consensus 86 ~~~DsG~Y~C~~~~ 99 (248)
T 3u2s_H 86 RVEDTATYFCVREA 99 (248)
T ss_dssp CGGGCEEEEEEEEE
T ss_pred CHHHCEEEEEEEeC
Confidence 99999999999964
No 232
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.60 E-value=1e-14 Score=100.56 Aligned_cols=98 Identities=16% Similarity=0.097 Sum_probs=71.0
Q ss_pred EeecceEEEecCCcEEEEEEEccCC----CCEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV----KVRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~----~~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
++.+..+++.+|++|+|+|.+.+.+ .+.|.|||+.. ...+....... ..+.||.+.. ..+.++|+|.++
T Consensus 5 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v 82 (240)
T 1moe_A 5 TQSPASLAVSLGQRATMSCRAGESVDIFGVGFLHWYQQKPGQPPKLLIYRASNLESGIPVRFSGTG--SRTDFTLIIDPV 82 (240)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSC
T ss_pred EeeCCeEEecCCCCEEEEEeCCCccccCCCceEEEEEECCCCCceEEEEEecccCcCCCccEEEEe--cCCeEEEEEcCC
Confidence 4556778999999999999999887 67899999752 23332221111 1357999864 457889999999
Q ss_pred CCCCCEEEEEeecCC-CC-eeEEEEeceecc
Q psy14080 81 QKRDNGTYECQAQPY-TT-TSHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~-~~-~s~~~~L~V~g~ 109 (113)
+.+|+|.|+|.+... +. .+..+.|.|.+.
T Consensus 83 ~~~D~G~Y~C~~~n~~~~~~~~~~~l~V~~~ 113 (240)
T 1moe_A 83 EADDVATYYCQQTNEDPYTFGGGTKLEIKGG 113 (240)
T ss_dssp CGGGCEEEEEEECSSSSCCBCCCEEEEECCC
T ss_pred ChhhCEEEEEEEccCCceeecCCEEEEEecC
Confidence 999999999999643 22 344567777653
No 233
>2cpc_A KIAA0657 protein; immunoglobulin domain, IG domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.60 E-value=2.8e-14 Score=88.69 Aligned_cols=79 Identities=13% Similarity=0.088 Sum_probs=61.3
Q ss_pred EEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecCC
Q psy14080 16 STGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQPY 95 (113)
Q Consensus 16 ~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 95 (113)
+++.+|+++.|.|.+. .+.+.|.|||. +..+ ..+.|+.+.. +....+|.|.+++.+|+|.|+|.+..
T Consensus 23 ~~~~~G~~v~L~C~~~-~p~~~v~W~k~--g~~~-------~~~~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C~a~n- 89 (113)
T 2cpc_A 23 VAAVRLERVVLTCELC-RPWAEVRWTKD--GEEV-------VESPALLLQK--EDTVRRLVLPAVQLEDSGEYLCEIDD- 89 (113)
T ss_dssp EEEETTCCEEEEEEES-CTTCCCEEEET--TEEC-------CCBTTBEEEE--CSSEEEEEESSCCTTTCEEEEEESSS-
T ss_pred EEEEcCCeEEEEEEec-CCCCeEEEEEC--CEEC-------ccCCCEEEEE--CCCEEEEEECCCCcccCEEEEEEEec-
Confidence 6889999999999996 56788999984 3322 2356777763 23457999999999999999999966
Q ss_pred CCeeEEEEeceecc
Q psy14080 96 TTTSHSQNAPGLGD 109 (113)
Q Consensus 96 ~~~s~~~~L~V~g~ 109 (113)
.+..+.|.|...
T Consensus 90 --~~~~~~l~V~~~ 101 (113)
T 2cpc_A 90 --ESASFTVTVTEP 101 (113)
T ss_dssp --CEEEEEEEEECC
T ss_pred --CcEEEEEEEecC
Confidence 566778887653
No 234
>2wbj_D OB TCR; transmembrane, immune response, T cell receptor, MHC II, MEM receptor, molecular mimicry, multiple sclerosis, immune SYS autoimmunity; HET: NAG BMA MAN; 3.00A {Homo sapiens}
Probab=99.59 E-value=8.7e-15 Score=103.98 Aligned_cols=85 Identities=14% Similarity=0.195 Sum_probs=63.9
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEe-cc---eEE---cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTS-GV---LTY---TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~-~~---~~~---~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
.++....+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+.. .. ... ...+||.+..+ ..++++|+|.
T Consensus 27 v~~~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~-~~~~~sL~I~ 105 (279)
T 2wbj_D 27 VSQHPSWVISKSGTSVKIECRSLDFQATTMFWYRQFPKQSLMLMATSNEGSKATYEQGVEKDKFLINHA-SLTLSTLTVT 105 (279)
T ss_dssp EEEECSEEEEETTSCEEEEEEESSSCEEEEEEEEECSSSCCEEEEEEESSSCCCCCSSSCSSSEEEEEC-SSSEEEEEES
T ss_pred EEeCCCeEEecCCCeEEEEEEeCCCCCCeEEEEEeCCCCCeEEEEEEecCCcceecCCccCCcEEEEeC-CCCEEEEEEc
Confidence 3455678899999999999999877778999999863 222222 11 011 12579998753 4578899999
Q ss_pred cCCCCCCEEEEEeecC
Q psy14080 79 FLQKRDNGTYECQAQP 94 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~ 94 (113)
+++.+|+|.|+|.+..
T Consensus 106 ~v~~~D~G~Y~C~~~~ 121 (279)
T 2wbj_D 106 SAHPEDSSFYICSARD 121 (279)
T ss_dssp SCCGGGCEEEEEEEEE
T ss_pred cCCccCCEEEEEEEcc
Confidence 9999999999999964
No 235
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.59 E-value=7.4e-15 Score=104.20 Aligned_cols=98 Identities=19% Similarity=0.198 Sum_probs=69.9
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEEe-cceEE-cCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILTS-GVLTY-TNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~~-~~~~~-~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
+++.+..+++.+|++|+|+|.+.+.+.+.|.|||+..+ ..+.. ..... ..+.||.+.. +++.++|+|.+++.+
T Consensus 15 v~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~ 92 (276)
T 3auv_A 15 MTQSPSSLSASVGDRVTITCRASQDVSTAVAWYQQKPGKAPKLLIYSASFLYSGVPSRFSGSG--SGTDFTLTISSLQPE 92 (276)
T ss_dssp EEEECSEEECCTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGG
T ss_pred EEeCCCeEEEcCCCCEEEEeEcCCCCCCcEEEEEECCCCCCEEEEEEcCccCCCCCCCEEEec--cCCeEEEEEccCChh
Confidence 45567788999999999999999888889999998632 23322 21111 1357998863 456889999999999
Q ss_pred CCEEEEEeecCC-CC-eeEEEEeceec
Q psy14080 84 DNGTYECQAQPY-TT-TSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~~~-~~-~s~~~~L~V~g 108 (113)
|+|.|+|.+... +. .+..+.|.|..
T Consensus 93 DsG~Y~C~~~n~~~~~~~~~~~l~V~~ 119 (276)
T 3auv_A 93 DFATYYCQQHYTTPPTFGCGTKVEIKG 119 (276)
T ss_dssp GCEEEEEEECSSSSCCCCCCEEEEC--
T ss_pred hCEEEEEEEecCCcccccCCEEEEEec
Confidence 999999999543 21 33345666654
No 236
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.59 E-value=4.8e-15 Score=102.97 Aligned_cols=97 Identities=16% Similarity=0.129 Sum_probs=69.5
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEe-cceE-EcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTS-GVLT-YTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~-~~~~-~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++....+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+.. .... ...++||.+.. ..+.++|+|.+++.+|
T Consensus 8 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~i~W~k~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D 85 (250)
T 3esu_F 8 IQSTSSLSASLGDRVTISCRASQDIRNYLNWYQQKPDGTVKLLIYYTSRLQSGVPSRFSGSG--SGTDYSLTISNLEQED 85 (250)
T ss_dssp ECSCSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGG
T ss_pred EecCCEEEeeCCCcEEEEEEecccCCceEEEEEECCCCCCEEEEEEeCCCCCCCCCCEEEeC--CCCEEEEEEccCChhh
Confidence 445667889999999999999998888999999863 223322 2211 12357997753 4568899999999999
Q ss_pred CEEEEEeecCCC--CeeEEEEeceec
Q psy14080 85 NGTYECQAQPYT--TTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~~--~~s~~~~L~V~g 108 (113)
+|.|+|.+.... .......|.|..
T Consensus 86 ~G~Y~C~~~n~~~~~~~~~~~l~V~~ 111 (250)
T 3esu_F 86 IGTYFCQQGNTLPWTFGGGTKLEIRR 111 (250)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC-
T ss_pred CEEEEEEEeeCCCceECCCEEEEEEC
Confidence 999999996432 233445666665
No 237
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.59 E-value=5.2e-15 Score=101.91 Aligned_cols=93 Identities=15% Similarity=0.179 Sum_probs=66.0
Q ss_pred ceEEEecCCcEEEEEE---EccCCCCEEEEEecCCC--e-EE-EecceEE----cCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 14 QISTGFLAVFSYSDKT---VRDIVKVRVSWVRRRDW--H-IL-TSGVLTY----TNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~---v~~~~~~~V~W~k~~~~--~-~l-~~~~~~~----~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
|.+++.+|++|+|+|. +.+.+.+.|.|||...+ . ++ ....... ....||.+.. +.+.++|.|.+++.
T Consensus 1 q~Vta~~Ge~v~L~C~~~~v~~~p~~~V~W~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~I~~v~~ 78 (203)
T 4fa8_A 1 QAVTAFLGERVTLTSYWRRVSLGPEIEVSWFKLGPGEEQVLIGRMHHDVIFIEWPFRGFFDIHR--SANTFFLVVTAANI 78 (203)
T ss_dssp -CCEEETTCCEEEEEECSSTTCSTTSEEEEEEEETTTEEEEEEEEETTEEEECGGGBTTEEEEE--ETTEEEEEESSCCG
T ss_pred CCeEEEcCCCEEEEeeeeccCCCCCcEEEEEEcCCCcceEEEEecCCceEEeeccccceEEEEE--cCCEEEEEEccCCH
Confidence 4689999999999996 45667889999996532 1 11 1111111 1235666653 45789999999999
Q ss_pred CCCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 83 RDNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 83 ~D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
+|+|.|.|.+. ..+..+..+.|.|..
T Consensus 79 ~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 105 (203)
T 4fa8_A 79 SHDGNYLCRMKLGETEVTKQEHLSVVK 105 (203)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred HHCeEEEEEEEcCCCcEEEEEEEEecC
Confidence 99999999995 456667778888864
No 238
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.59 E-value=1.8e-14 Score=102.56 Aligned_cols=99 Identities=11% Similarity=0.030 Sum_probs=69.3
Q ss_pred EeecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEEEe-c---ce-EE--cCCCCEEEEEeCCCCcEEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HILTS-G---VL-TY--TNDARFQVIHTDGSDDWNLQI 77 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l~~-~---~~-~~--~~~~R~~~~~~~~~~~~~L~I 77 (113)
...+..+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+.. . .. .. ..++||.+..+...+.++|+|
T Consensus 30 ~~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I 109 (282)
T 1qok_A 30 LQQSGAELVRSGTSVKLSCTASGFNIKDSYMHWLRQGPEQGLEWIGWIDPENGDTEYAPKFQGKATFTTDTSSNTAYLQL 109 (282)
T ss_dssp EEECCCEEEETTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEEETTTTEEEECGGGBTTEEEEEETTTTEEEEEE
T ss_pred EECCCCEEEeCCCeEEEEEeccCCCCCCceEEEEEeCCCCCcEEEEEEecCCCccccCchhcCcEEEEEecCCCeEEEEE
Confidence 3455678999999999999998764 578999998632 22221 1 00 11 125799987655567799999
Q ss_pred ccCCCCCCEEEEEeecCC-C---C--eeEEEEeceec
Q psy14080 78 KFLQKRDNGTYECQAQPY-T---T--TSHSQNAPGLG 108 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~~-~---~--~s~~~~L~V~g 108 (113)
.+++.+|+|.|+|.+... + . ....+.|.|..
T Consensus 110 ~~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~ 146 (282)
T 1qok_A 110 SSLTSEDTAVYYCNEGTPTGPYYFDYWGQGTTVTVSS 146 (282)
T ss_dssp CSCCGGGCEEEEEEEECSSSSCCCEEECCCEEEEEEC
T ss_pred CcCChhhCEEEEEEeccCCCccceeeeCCCEEEEEec
Confidence 999999999999999643 2 1 22345677765
No 239
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.59 E-value=9.8e-15 Score=103.04 Aligned_cols=98 Identities=14% Similarity=0.111 Sum_probs=68.3
Q ss_pred eEeecceEEEecCCcEEEEEEEccCC-----CCEEEEEecCC---CeEEEecceEEc--CCCCEEEEEeCCCCcEEEEEc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIV-----KVRVSWVRRRD---WHILTSGVLTYT--NDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~-----~~~V~W~k~~~---~~~l~~~~~~~~--~~~R~~~~~~~~~~~~~L~I~ 78 (113)
.++.+..+++.+|++|+|+|.+.+.+ .+.|.|||+.. ...+........ .++||.+.. +++.++|+|.
T Consensus 18 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~ 95 (268)
T 1x9q_A 18 MTQTPLSLPVSLGDQASISCRSSQSLVHSNGNTYLRWYLQKPGQSPKVLIYKVSNRVSGVPDRFSGSG--SGTDFTLKIN 95 (268)
T ss_dssp EEEECSEECCCTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTSCTTEEEEE--ETTEEEEEES
T ss_pred EEeeCCeEEecCCCCEEEEeEecCCcccccCCceEEEEEECCCCCCEEEEEecCCCCCCCcccEEEEc--CCCEEEEEEC
Confidence 34556778899999999999998776 47899999863 233322211111 257999864 3567899999
Q ss_pred cCCCCCCEEEEEeecCCCC--eeEEEEeceec
Q psy14080 79 FLQKRDNGTYECQAQPYTT--TSHSQNAPGLG 108 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~~--~s~~~~L~V~g 108 (113)
+++.+|+|.|+|.+..... ....+.|.|.+
T Consensus 96 ~v~~~DsG~Y~C~~~~~~~~~~~~~~~L~V~~ 127 (268)
T 1x9q_A 96 RVEAEDLGVYFCSQSTHVPWTFGGGTKLEIKS 127 (268)
T ss_dssp SCCGGGCEEEEEEECSSSSCEECCCEEEC---
T ss_pred CCChhHCEEEEEEEecCCCceEcCCEEEEEcc
Confidence 9999999999999965421 33445777765
No 240
>3r06_A Anti-mouse CD3epsilon antibody 2C11 FAB light CHA; anti-CD3epsilon, T-cell receptor, signalling, IMMU; 2.50A {Cricetulus migratorius} PDB: 3r08_L 3ld8_B 3ldb_B*
Probab=99.59 E-value=1.3e-14 Score=98.28 Aligned_cols=96 Identities=16% Similarity=0.091 Sum_probs=69.4
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEe-cceE-EcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTS-GVLT-YTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~-~~~~-~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
+++....+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+.. .... ...++||.+.. ..++++|+|.+++.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~ 81 (213)
T 3r06_A 4 MTQSPSSLPASLGDRVTINCQASQDISNYLNWYQQKPGKAPKLLIYYTNKLADGVPSRFSGSG--SGRDSSFTISSLESE 81 (213)
T ss_dssp EEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGG
T ss_pred eEeCCCEEEecCCCcEEEEEEeCCCcCceEEEEEECCCCCcEEEEEEcCcCCCCCCCcEEEec--cCCEEEEEECCCCcc
Confidence 3455677899999999999999998888999999752 222322 2211 12367998863 457889999999999
Q ss_pred CCEEEEEeecCCC--CeeEEEEece
Q psy14080 84 DNGTYECQAQPYT--TTSHSQNAPG 106 (113)
Q Consensus 84 D~G~Y~C~~~~~~--~~s~~~~L~V 106 (113)
|+|.|+|.+.... .....+.|.|
T Consensus 82 D~G~Y~C~~~~~~~~~~~~~~~l~V 106 (213)
T 3r06_A 82 DIGSYYCQQYYNYPWTFGPGTKLEI 106 (213)
T ss_dssp GCSEEEEEECSSSSCEECCCEEEEE
T ss_pred cCEEEEEecccCCceEEcCCceEEE
Confidence 9999999996432 2334455666
No 241
>1bec_A 14.3.D T cell antigen receptor; T cell receptor; 1.70A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1jck_A 1l0x_A 1sbb_A 1l0y_A 3c6l_B 1mwa_B* 1g6r_B* 1tcr_B* 2ckb_B 2q86_B* 1lp9_F 2j8u_F 2jcc_F 2uwe_F 3mbe_D* 1d9k_B* 2aq3_A 3mc0_A 3byt_A 3bzd_A ...
Probab=99.59 E-value=2.1e-14 Score=99.76 Aligned_cols=97 Identities=9% Similarity=0.034 Sum_probs=67.6
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEE-ec--ceEE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILT-SG--VLTY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~-~~--~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
++....+++.+|++|+|+|.+. .+.+.|.|||+..+ ..+. .. .... ...+||.+..+ ..++++|+|++++
T Consensus 3 ~q~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~L~I~~v~ 80 (238)
T 1bec_A 3 TQSPRNKVAVTGGKVTLSCQQT-NNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASRP-SQEQFSLILELAT 80 (238)
T ss_dssp EEECSEEEEETTCCEEEEEEES-SCCSEEEEEEECTTSCEEEEEEEEETTEEEECSCCTTCEEECC-SSSEEEEEESSCC
T ss_pred ccCCCeeEEeCCCcEEEEEEeC-CCCceEEEEEECCCCCEEEEEEEeCCCcccCCCccceEEEEec-CCCEEEEEEecCC
Confidence 4556778999999999999995 45789999998632 2222 11 1111 12579998742 3567899999999
Q ss_pred CCCCEEEEEeecCCC------CeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPYT------TTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~------~~s~~~~L~V~g 108 (113)
.+|+|.|+|.+.... .......|.|.+
T Consensus 81 ~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~ 113 (238)
T 1bec_A 81 PSQTSVYFCASGGGRGSYAEQFFGPGTRLTVLE 113 (238)
T ss_dssp GGGCEEEEEEEESCTTCGGGCEECCCEEEEEES
T ss_pred cccCEEEEEEEecCCCCccccccCCCEEEEEec
Confidence 999999999996531 112334566665
No 242
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.59 E-value=1.5e-14 Score=101.91 Aligned_cols=98 Identities=11% Similarity=0.078 Sum_probs=68.1
Q ss_pred eecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eec---c-eEE--cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSG---V-LTY--TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~---~-~~~--~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
..+..+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ ... . ... ..++||.+..+...+.++|+|.
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 84 (256)
T 1nqb_A 5 QQSGAELVKPGASVKLSCKASGYTFTSYWMHWVKQRPGRGLEWIGRIDPNSGGTKYNEKFKSKATLTVDKPSSTAYMQLS 84 (256)
T ss_dssp EECCCEEECTTCCEEEEEEECSSCGGGSCEEEEEEETTTEEEEEEEECTTTCCEEECGGGTTTEEEEEETTTTEEEEEEC
T ss_pred ECCCCeeecCCCcEEEEEEeccccCCCceEEEEEECCCCCcEEEEEEecCCCceeeCcccCCeEEEEEecCCCEEEEEEC
Confidence 345567899999999999998764 578999997532 222 211 0 011 1257999876555678999999
Q ss_pred cCCCCCCEEEEEeecCC-C-----CeeEEEEeceec
Q psy14080 79 FLQKRDNGTYECQAQPY-T-----TTSHSQNAPGLG 108 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~-~-----~~s~~~~L~V~g 108 (113)
+++.+|+|.|+|.+... + .....+.|.|..
T Consensus 85 ~v~~~DsG~Y~C~~~n~~g~~~~~~~~~~~~L~V~~ 120 (256)
T 1nqb_A 85 SLTSEDSAVYYCARYDYYGSSYFDYWGQGTTVTVSS 120 (256)
T ss_dssp SCCGGGCEEEEEEECCTTSSSSCSEECCCEEEEECC
T ss_pred cCChhhCEEEEEEEeeccCccceeEEcCceeeeecc
Confidence 99999999999999643 2 122345666654
No 243
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.58 E-value=1e-14 Score=101.15 Aligned_cols=95 Identities=13% Similarity=0.114 Sum_probs=67.2
Q ss_pred ceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eecc----eEE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSGV----LTY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~~----~~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
..+++.+|++|+|.|.+.+.+ .+.|.|||+..+ ..+ .... ... ....||.+..+...+.++|+|.+++
T Consensus 10 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 89 (247)
T 2ghw_B 10 GGGVVQPGKSLRLSCAASGFAFSSYAMHWVRQAPGKGLEWVAVISYDGSNKYYADSVKGRFTISRDNSKNTLYLQMNSLR 89 (247)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSSCEEECTTTTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCEEEecCCcEEEEEEeccccCCCceEEEEEeCCCCceEEEEEEecCCCceeeCccccCcEEEEEeCCCCEEEEEECcCC
Confidence 458899999999999999876 578999997532 222 2110 011 1357999876555678999999999
Q ss_pred CCCCEEEEEeecCC-C--CeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPY-T--TTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~-~--~~s~~~~L~V~g 108 (113)
.+|+|.|+|.+... . .....+.|.|..
T Consensus 90 ~~D~G~Y~C~~~n~~~~~~~~~~~~l~V~~ 119 (247)
T 2ghw_B 90 AEDTAVYYCARDRSYYLDYWGQGTLVTVSS 119 (247)
T ss_dssp GGGCEEEEEEEEETTEEEEECCCEEEEECS
T ss_pred HHHCEEEEEeeeccCCccccCCceEEEEec
Confidence 99999999999643 1 122334666664
No 244
>3mj8_L Stimulatory hamster antibody HL4E10 FAB light CHA; hamster IGG, immune system; 2.94A {Cricetulus migratorius} PDB: 3mj9_L*
Probab=99.58 E-value=1.2e-14 Score=98.49 Aligned_cols=92 Identities=15% Similarity=0.117 Sum_probs=68.2
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEe-cceE-EcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTS-GVLT-YTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~-~~~~-~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
.+++.+|++|+|+|.+.+.+.+.|.|||+.+ ...+.. .... ...++||.+.. ..++++|.|.+++.+|+|.|+
T Consensus 9 ~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~ 86 (213)
T 3mj8_L 9 LVSVALGQKATITCSGDKLSDVYVHWYQQKAGQAPVLVIYEDNRRPSGIPDHFSGSN--SGNMATLTISKAQAGDEADYY 86 (213)
T ss_dssp EEEEETTSCEEEEEECSSTTTSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE--ETTEEEEEESSCCGGGCEEEE
T ss_pred cEEEeCCCCEEEEEEcCCCCCceEEEEEECCCCCcEEEEEECCccCCCccCcEEEEe--cCCEEEEEECCCChhhCEEEE
Confidence 6889999999999999988889999999653 233322 1111 12357998764 457889999999999999999
Q ss_pred EeecCC-C---CeeEEEEeceec
Q psy14080 90 CQAQPY-T---TTSHSQNAPGLG 108 (113)
Q Consensus 90 C~~~~~-~---~~s~~~~L~V~g 108 (113)
|.+... + ..+..+.|.|.+
T Consensus 87 C~~~~~~~~~~~~~~~~~l~V~~ 109 (213)
T 3mj8_L 87 CQSWDGTNSAWVFGSGTKVTVLG 109 (213)
T ss_dssp EEEEETTTTEEEEBCCEEEEEEC
T ss_pred EEeccCCcceeEEcCceEEEEeC
Confidence 999543 3 345567777763
No 245
>2dru_A Chimera of CD48 antigen and T-cell surface antige; CD2 binding domain of CD48, immune system; HET: NAG; 2.60A {Rattus norvegicus}
Probab=99.58 E-value=1.1e-14 Score=98.22 Aligned_cols=95 Identities=13% Similarity=0.038 Sum_probs=68.1
Q ss_pred eecceEEEecCCcEEEEEEEcc-CCCCEEEEEecCCCeEEEecc--e--EEcCC--CCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRD-IVKVRVSWVRRRDWHILTSGV--L--TYTND--ARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~-~~~~~V~W~k~~~~~~l~~~~--~--~~~~~--~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.....+.+.+|++|+|+|.+.. .+.+.|.|+|.++..+..... . .+... +|+.+. ..+++|+|++++.+
T Consensus 4 ~~~~~v~v~~G~~vtL~c~~~~~~~~~~i~W~k~~~~~i~~~~~~~~~~~~~~~~~~R~~l~----~~~~sL~I~~v~~~ 79 (180)
T 2dru_A 4 QSVPNVNAITGSNVTLTILKHPLASYQRLTWLHTTNQKILEYFPNGKKTVFESVFKDRVDLD----KTNGALRIYNVSKE 79 (180)
T ss_dssp SSCCEEEEETTSCEEECCCSSCCCSCSEEEEESSSSCEEEEECSSSCEEECSSTTTTTEEEC----TTTCCEEECSCCGG
T ss_pred cccceEEEEeCCCEEEeCCCCCCCceeEEEEEecCCeEEEEEECCCCeeEcchhcCCeEEEe----CCCccEEEcCCCHH
Confidence 3456788999999999999854 236799999953334433211 1 12122 688762 25779999999999
Q ss_pred CCEEEEEeecCCCCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
|+|.|.|.+......+..+.|.|.+.
T Consensus 80 D~G~Y~C~v~~~~~~~~~~~L~V~~~ 105 (180)
T 2dru_A 80 DRGDYYMRMLHETEDQWKITMEVYEM 105 (180)
T ss_dssp GCEEEEEEEESSSEEEEEEEEEEECC
T ss_pred HCeEEEEEEEcCCeEEEEEEEEEECC
Confidence 99999999965445677889998764
No 246
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.58 E-value=1.1e-13 Score=92.35 Aligned_cols=96 Identities=18% Similarity=0.137 Sum_probs=72.8
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCC-CC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQ-KR 83 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~ 83 (113)
|+.+.. ......+.+|+++.|.|.+.+.+.+.+.|+|..++..+... ..+.||.+.. +.+..+|.|.+++ .+
T Consensus 92 ~p~~~~-~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~~g~~~~~~----~~~~~~~~~~--~~~~~~L~i~~~~~~~ 164 (190)
T 2wv3_A 92 APDITG-HKRSENKNEGQDAMMYCKSVGYPHPEWMWRKKENGVFEEIS----NSSGRFFIIN--KENYTELNIVNLQITE 164 (190)
T ss_dssp CCEEEE-ECSEEEEETTSCEEEEEEEECSSCCEEEEEEEETTEEEECC----CTTSCEEEEE--CSSEEEEEECSCCTTT
T ss_pred CCcccc-cCCcceeeCCCcEEEEEEeCccCCCceEEEEcCCCceeeee----cCCCeEEEec--CCCeeEEEEEeccccC
Confidence 444433 34566799999999999999988899999996555554321 2467888763 3455799999999 79
Q ss_pred CCEEEEEee-cCCCCeeEEEEecee
Q psy14080 84 DNGTYECQA-QPYTTTSHSQNAPGL 107 (113)
Q Consensus 84 D~G~Y~C~~-~~~~~~s~~~~L~V~ 107 (113)
|+|.|+|.+ +..+..+..+.|.|.
T Consensus 165 d~G~Y~C~a~N~~g~~~~~~~l~V~ 189 (190)
T 2wv3_A 165 DPGEYECNATNSIGSASVSTVLRVR 189 (190)
T ss_dssp SCEEEEEEEECSSCEEEEEEEEEEE
T ss_pred CCEEEEEEEEecCCcceeEEEEEEE
Confidence 999999999 456777888888775
No 247
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.58 E-value=5.7e-15 Score=103.09 Aligned_cols=95 Identities=18% Similarity=0.113 Sum_probs=66.5
Q ss_pred cceEEEecCCcEEEEEEEccC--CCCEEEEEecCC---CeEEEe-cceE-EcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRD---WHILTS-GVLT-YTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~---~~~l~~-~~~~-~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
...+++.+|++|+|+|.+.+. +.+.|.|||+.. ...+.. .... ...++||.+.. +.+.++|+|++++.+|+
T Consensus 9 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~Ds 86 (256)
T 3ux9_B 9 PPSVSGAPGQRVTISCSGSSSNIGSNYVSWYQQLPGTAPKLLIYDNNQRPSGVPDRFSGSK--SGTSASLAITGLQSEDE 86 (256)
T ss_dssp CSEEEECTTCCEEEEEECCTTTTTTSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE--ETTEEEEEECSCCGGGC
T ss_pred CCcEEEcCCCcEEEEEecCCCCCCCceEEEEEECCCCCCEEEEEecCCCCCCcCCcEEEEc--cCCEEEEEECCCChhhC
Confidence 345789999999999999876 678999999753 233322 1111 12357998863 34678999999999999
Q ss_pred EEEEEeecCC-C---CeeEEEEeceecc
Q psy14080 86 GTYECQAQPY-T---TTSHSQNAPGLGD 109 (113)
Q Consensus 86 G~Y~C~~~~~-~---~~s~~~~L~V~g~ 109 (113)
|.|+|.+... . .....+.|.|.+.
T Consensus 87 G~Y~C~~~~~~~~~~~~~~~~~l~V~~~ 114 (256)
T 3ux9_B 87 ADYYCQVRDNNENEWVFGGGTKLTVLGS 114 (256)
T ss_dssp EEEEEEEEETTTTEEEECCCEEEEEC--
T ss_pred EEEEEEEEECCCCceEECCCEEEEEECC
Confidence 9999999542 1 2334456777653
No 248
>3umt_A SCFV heavy chain and light chain; stability engineering, anthrax, anti-BCLA antibody, immunoglobulin fold (VH and VL domains), antibody, immune S; HET: NHE; 1.80A {Mus musculus} PDB: 1xiw_D
Probab=99.58 E-value=8.4e-15 Score=102.50 Aligned_cols=101 Identities=15% Similarity=0.102 Sum_probs=71.1
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
........+++.+|++++|.|.+.+.+.+.|.|||+..+ ..+....... ...+||.+.. ....++|+|.+++.
T Consensus 140 ~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~ 217 (256)
T 3umt_A 140 QLTQSPSSLSASLGERVSITCRASQDIGSNLNWLQQKPDGTIKRLIYATSSLDSGVPKRFSGSR--SGSDYSLTISSLES 217 (256)
T ss_dssp CEEEECSEEEECTTCCEEEEEEESSCCTTCEEEEEECTTCCEEEEEETTTEECTTSCTTEEEEE--ETTEEEEEECSCCG
T ss_pred EEEcCCCeEEEECCCCEEEEEEEecCCCcEEEEEEECCCCCcEEEEEeccccCCccCCCEEEec--CCCEEEEEECCCCh
Confidence 344555668899999999999999887789999997532 2222221111 1257998763 35678999999999
Q ss_pred CCCEEEEEeecCCC--CeeEEEEeceeccc
Q psy14080 83 RDNGTYECQAQPYT--TTSHSQNAPGLGDL 110 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~--~~s~~~~L~V~g~~ 110 (113)
+|+|.|+|.+.... .......|.|++..
T Consensus 218 ~D~G~Y~C~~~~~~~~~fg~gt~L~V~~~~ 247 (256)
T 3umt_A 218 EDFVDYYCLQYASSPPTFGGGTKLEIKRAA 247 (256)
T ss_dssp GGCSEEEEEECSSSSCEECCCEEEEEC---
T ss_pred hHCEEEEEEEeeCCCcEECCCEEEEEECCC
Confidence 99999999996432 34566788887653
No 249
>3qib_D 2B4 beta chain; IG domain, immune system; HET: NAG FUC BMA; 2.70A {Mus musculus}
Probab=99.58 E-value=1.5e-14 Score=101.89 Aligned_cols=97 Identities=11% Similarity=0.041 Sum_probs=66.7
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEEe-cc-eEEcC----CCCEEEEEeCCCCcEEEEEccC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILTS-GV-LTYTN----DARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~~-~~-~~~~~----~~R~~~~~~~~~~~~~L~I~~v 80 (113)
++....+++.+|++|+|+|.+.. +.+.|.|||+..+ ..+.. .. ..... ++||.+.. ...++++|+|.++
T Consensus 31 ~~~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~sL~I~~v 108 (270)
T 3qib_D 31 IQTPRYLVKGQGQKAKMRCIPEK-GHPVVFWYQQNKNNEFKFLINFQNQEVLQQIDMTEKRFSAEC-PSNSPCSLEIQSS 108 (270)
T ss_dssp EEECSEEEEETTSCEEEEEECCT-TCCEEEEEEECTTCCEEEEEEEETTEEEEECHHHHHHEEEEC-CTTSCEEEEESSC
T ss_pred EeCCCeEEEcCCCCEEEEEEecC-CCceEEEEEECCCCCcEEEEEECCCCceecCCccCCcEEEEe-CCCcEEEEEECCC
Confidence 34456789999999999999875 6689999997632 22222 11 11111 12998874 3467899999999
Q ss_pred CCCCCEEEEEeecCC-----CCeeEEEEeceec
Q psy14080 81 QKRDNGTYECQAQPY-----TTTSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~-----~~~s~~~~L~V~g 108 (113)
+.+|+|.|+|.+... ......+.|.|.+
T Consensus 109 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 141 (270)
T 3qib_D 109 EAGDSALYLCASSLNWSQDTQYFGPGTRLLVLE 141 (270)
T ss_dssp CGGGCEEEEEEEESCTTCCCCEECCCEEEEEES
T ss_pred CHhHCeEEEEEEecCCCccceEECCcEEEEEcc
Confidence 999999999999642 1223445666665
No 250
>3pl6_D MBP peptide / T-cell receptor beta chain chimera; TCR-MHC complex, immunoglobulin fold, immune receptor, membr immune system; HET: NAG; 2.55A {Homo sapiens}
Probab=99.58 E-value=1.9e-14 Score=101.15 Aligned_cols=96 Identities=11% Similarity=0.058 Sum_probs=67.5
Q ss_pred eecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEE-ec-ceEEcC----CCCEEEEEeCCCCcEEEEEccCC
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILT-SG-VLTYTN----DARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~-~~-~~~~~~----~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
+....+++.+|++|+|+|.+. .+.+.|.|||+.. ...+. .. ...... ++||.+.. ...++++|+|.+++
T Consensus 31 ~~p~~v~v~~G~~v~L~C~~~-~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~-~~~~~~sL~I~~v~ 108 (268)
T 3pl6_D 31 QTPSNKVTEKGKYVELRCDPI-SGHTALYWYRQSLGQGPEFLIYFQGTGAADDSGLPNDRFFAVR-PEGSVSTLKIQRTE 108 (268)
T ss_dssp CCCSEEEEETTCCEEEEEBCB-TTCCEEEEEEECTTSCCEEEEEEETTEEEECTTCCSTTEEEEC-TTSSSEEEEECSCC
T ss_pred eCCCEEEecCCCCEEEEEEeC-CCCceEEEEEECCCCCcEEEEEECCCCccccCCCccCcEEEEe-cCCCEEEEEECCCC
Confidence 445668999999999999987 4668999999753 22222 11 111111 27999875 24668999999999
Q ss_pred CCCCEEEEEeecCC---CCeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPY---TTTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~---~~~s~~~~L~V~g 108 (113)
.+|+|.|+|.+... ........|.|.+
T Consensus 109 ~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~~ 138 (268)
T 3pl6_D 109 RGDSAVYLCATSALGDTQYFGPGTRLTVLE 138 (268)
T ss_dssp GGGCEEEEEEEESSSSSCEECCCEEEEEES
T ss_pred cccCEEEEEEEecCCCceeeCCcEEEEEec
Confidence 99999999999642 2334455666665
No 251
>2e6q_A Obscurin-like protein 1; IG-like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.58 E-value=3.5e-14 Score=90.20 Aligned_cols=100 Identities=11% Similarity=0.036 Sum_probs=68.9
Q ss_pred cCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecce---EEcCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVL---TYTNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 3 ~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~---~~~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
..|+.-+....+++++.+|++|+|.|.+++ .+.+.|||.. ..|..+.. ......||.+. .+....+|.|++
T Consensus 5 ~~p~~~~~~~l~d~~v~eG~~a~f~C~vs~--~p~v~W~knG--~~l~~~~~~~~~~~~~~r~~i~--~~g~~~~L~I~~ 78 (112)
T 2e6q_A 5 SSGTARLVAGLEDVQVYDGEDAVFSLDLST--IIQGTWFLNG--EELKSNEPEGQVEPGALRYRIE--QKGLQHRLILHA 78 (112)
T ss_dssp CCSCCCEEECCCCEEEETTCEEEEEEEESS--CCCCEEEESS--CBCCSSCCCTTSCTTSCEEEEC--CBTTEEEEEEES
T ss_pred ccCCcEEecCCCCeEEcCCCcEEEEEEECC--CCeEEEEECC--EECccCcccccccccccEEEEE--eCCcEEEEEECC
Confidence 346666667778899999999999999997 6789999843 33321100 00001188875 234567999999
Q ss_pred CCCCCCEEEEEeecCCCCeeEEEEeceeccc
Q psy14080 80 LQKRDNGTYECQAQPYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~~~s~~~~L~V~g~~ 110 (113)
++++|+|.|.|..-. .....+.|.|++.-
T Consensus 79 v~~~D~G~Y~~~~~~--~~~ssA~L~V~~~p 107 (112)
T 2e6q_A 79 VKHQDSGALVGFSCP--GVQDSAALTIQESS 107 (112)
T ss_dssp CCSTTCSEEEEEEET--TEEEEEEEEEECSS
T ss_pred CCHHHCccEEEEEEC--CeeEEEEEEEeCCC
Confidence 999999999774422 23457899998753
No 252
>3to4_D NKT vbeta2 (mouse variable domain, human constant; mouse CD1D, mouse NKT, immune system; HET: AGH NAG; 3.10A {Homo sapiens}
Probab=99.57 E-value=8.9e-15 Score=102.47 Aligned_cols=97 Identities=10% Similarity=0.013 Sum_probs=65.8
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEE-Eecce--E--EcCCC-CEEEEEeCCCCcEEEEEcc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HIL-TSGVL--T--YTNDA-RFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l-~~~~~--~--~~~~~-R~~~~~~~~~~~~~L~I~~ 79 (113)
.++....+++.+|++|+|+|.+.+.+.+.|.|||+..+ ..+ ..... . ....+ ||.+..+ .... |+|.+
T Consensus 4 v~q~p~~v~v~~G~~v~L~C~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~--~~~~-L~I~~ 80 (253)
T 3to4_D 4 LEQNPRWRLVPRGQAVNLRCILKNSQYPWMSWYQQDLQKQLQWLFTLRSPGDKEVKSLPGADYLATRV--TDTE-LRLQV 80 (253)
T ss_dssp CEEECSEEEEESSCCEEEEEECSCTTCCCEEEEEEETTCCEEEEEEECSTTCEEEEEETTEEEEEECC--SSSC-CEEEE
T ss_pred EEeCCCeEEEeCCCcEEEEEEeCCCCcceEEEEEECCCCCcEEEEEECCCcceecCCccCCcEEEEeC--CCCe-EEEcc
Confidence 35556678999999999999998888889999997632 222 22110 0 01123 9988743 2233 99999
Q ss_pred CCCCCCEEEEEeecCCC-------CeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQPYT-------TTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~-------~~s~~~~L~V~g 108 (113)
++.+|+|.|+|.+.... .......|.|.+
T Consensus 81 v~~~DsG~Y~C~~~~~~~~~~~~~~~~~~t~l~V~~ 116 (253)
T 3to4_D 81 ANMSQGRTLYCTSSADHWTNTGQLYFGEGSKLTVLE 116 (253)
T ss_dssp ESCSSCEEEEEEEECSCCSTTCCEEECCCEEEEEES
T ss_pred CChhhCeEEEEEEecCCCCcccceEECCCEEEEEec
Confidence 99999999999996321 222334666654
No 253
>1lk3_L 9D7 light chain; antigen-antibody complex, immune system; 1.91A {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.2 PDB: 1fn4_A 1c5d_L 1bfo_A 3b9k_L*
Probab=99.57 E-value=2.6e-14 Score=96.92 Aligned_cols=94 Identities=16% Similarity=0.095 Sum_probs=67.5
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
...+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+....... ....||.+.. ..+.++|.|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~ 84 (210)
T 1lk3_L 7 PPALTVSPGEKLTISCKASESVTSRMHWYQQKPGQQPKLLIYKASNLASGVPARFSGSG--SGTDFTLTIDPVEADDTAI 84 (210)
T ss_dssp CSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGGCEE
T ss_pred CCcEEEcCCCCEEEEeeCCCccCCCEEEEEECCCCCeEEEEEccccccCCccccEEEEe--cCCEEEEEECCCCHHHCeE
Confidence 778899999999999999988778899999753 22333221111 1247998764 4567899999999999999
Q ss_pred EEEeecCCC-C-eeEEEEeceec
Q psy14080 88 YECQAQPYT-T-TSHSQNAPGLG 108 (113)
Q Consensus 88 Y~C~~~~~~-~-~s~~~~L~V~g 108 (113)
|+|.+.... . ....+.|.|.+
T Consensus 85 Y~C~~~~~~~~~~~~~~~l~V~~ 107 (210)
T 1lk3_L 85 YFCQQSWNGPLTFGAGTKLELKR 107 (210)
T ss_dssp EEEEECSSSSCEECCCEEEEECC
T ss_pred EEEEEEcCCCceeCCCEEEEEcC
Confidence 999996432 2 22334566654
No 254
>1za6_B IGG heavy chain; immunoglobulin fold, CH2-domain-deletion, immune system; 2.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2
Probab=99.57 E-value=2.7e-14 Score=103.88 Aligned_cols=97 Identities=7% Similarity=0.036 Sum_probs=68.5
Q ss_pred ecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCC---eEE-Eec---c-eEE--cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDW---HIL-TSG---V-LTY--TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~---~~l-~~~---~-~~~--~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
....+++.+|++|+|+|.+.+. +.+.|.|||+..+ ..+ +.. . ... ..++||.+..+...+.++|+|.+
T Consensus 6 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 85 (344)
T 1za6_B 6 QSGAEVVKPGASVKISCKASGYTFTDHAIHWVKQNPGQRLEWIGYFSPGNDDFKYNERFKGKATLTADTSASTAYVELSS 85 (344)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCTTSSCEEEEEECSSSCEEEEEEEETTTTEEEECTTTBTTEEEEEETTTTEEEEEECS
T ss_pred CCCCeEEeCCCcEEEEEEcCCccccccEEEEEEECCCCCcEEEEEEecCCCceEECcccCCcEEEEEecCCCEEEEEECC
Confidence 3456789999999999999876 3578999998532 222 111 0 111 12579998765556789999999
Q ss_pred CCCCCCEEEEEeecCCC-CeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQPYT-TTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~-~~s~~~~L~V~g 108 (113)
++.+|+|.|+|.+.... .....+.|.|.+
T Consensus 86 v~~~D~G~Y~C~~~n~~~~~~~~~~l~V~~ 115 (344)
T 1za6_B 86 LRSEDTAVYFCTRSLNMAYWGQGTLVTVSS 115 (344)
T ss_dssp CCGGGCEEEEEEETTTTCEECCCEEEEECS
T ss_pred CCcccCEEEEEEEecCcceecCcEEEEEec
Confidence 99999999999996532 334456676663
No 255
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.57 E-value=5e-14 Score=93.56 Aligned_cols=96 Identities=15% Similarity=0.145 Sum_probs=72.1
Q ss_pred ccCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 2 VAAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 2 ~~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
+..|+.+... ..++++.+|+++.|.|.+.+.+.+.+.|+|.. ..+ ....|+.+.. +....+|.|.+++
T Consensus 4 ~~~~P~~~~~-~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~--~~~-------~~~~~~~~~~--~~~~~~L~i~~~~ 71 (197)
T 3lcy_A 4 SGEAPGIRKE-MKDVTTKLGEAAQLSCQIVGRPLPDIKWYRFG--KEL-------IQSRKYKMSS--DGRTHTLTVMTEE 71 (197)
T ss_dssp CCEEEEEEEC-CCCEEEETTSEEEEEEEEEEESCCEEEEEETT--EEE-------CCCSSEEEEE--SSSEEEEEEECCS
T ss_pred cCCCCccccc-CCceEEeCCCcEEEEEEEecCCCCEEEEEECC--EEC-------CCCccEEEEe--CCCEEEEEEecCC
Confidence 3445555544 45789999999999999988888899999843 222 2456777763 3456799999999
Q ss_pred CCCCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 82 KRDNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 82 ~~D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
.+|+|.|+|.+. ..+..+..+.|.|...
T Consensus 72 ~~d~G~Y~C~~~n~~~~~~~~~~l~v~~~ 100 (197)
T 3lcy_A 72 QEDEGVYTCIATNEVGEVETSSKLLLQAT 100 (197)
T ss_dssp GGGCEEEEEEEECSSCEEEEEEEEEEEEE
T ss_pred ccCCEEEEEEEECCCCceeEEEEEEEEcC
Confidence 999999999995 4455666777777643
No 256
>3uzq_A Anti-dengue MAB 4E11; dengue antibody neutralization, immune system; HET: MES; 1.60A {Mus musculus} PDB: 3uze_A* 3uyp_A* 3uzv_B 1dzb_A
Probab=99.57 E-value=2.7e-14 Score=99.73 Aligned_cols=102 Identities=18% Similarity=0.110 Sum_probs=72.3
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCCCC----EEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIVKV----RVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~~~----~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
........+++.+|++|+|.|.+.+.+.+ .|.|||+.. ...+....... ...+||.+.. ....++|.|.
T Consensus 135 ~v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~ 212 (253)
T 3uzq_A 135 VMTQTPASLAVSLGQRATISCRASENVDRYGNSFMHWYQQKAGQPPKLLIYRASNLESGIPARFSGSG--SRTDFTLTIN 212 (253)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEES
T ss_pred eEECcCCeEEEeCCCCEEEEEEecCccccCCCcEEEEEEECCCCCCEEEEEEccccCCccCCceEEeC--CCCEEEEEEC
Confidence 44555667899999999999999987665 899999753 23333222222 1247888753 3567899999
Q ss_pred cCCCCCCEEEEEeecCC--CCeeEEEEeceecccc
Q psy14080 79 FLQKRDNGTYECQAQPY--TTTSHSQNAPGLGDLL 111 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~--~~~s~~~~L~V~g~~~ 111 (113)
+++.+|+|.|+|++... ........|.|++...
T Consensus 213 ~v~~~DsG~Y~C~~~n~~~~~fg~gt~l~v~~~~~ 247 (253)
T 3uzq_A 213 PVEADDVATYFCQRSNEVPWTFGGGTKLEIKRPLE 247 (253)
T ss_dssp SCCGGGCEEEEEEECSSSSCCBCCCEEEEECCC--
T ss_pred CCCHHHCEEEEEEEccCCCcEECCCEEEEEcCCCC
Confidence 99999999999999543 2445667788877543
No 257
>3bkj_L WO2 IGG2A FAB fragment light chain kappa; abeta, FAB, WO2, alzheimer'S disease, immunotherapies, APP, immune system; 1.59A {Mus musculus} PDB: 3bkc_L 3bkm_L 2zuq_B* 1h3p_L
Probab=99.57 E-value=3.7e-14 Score=98.99 Aligned_cols=97 Identities=16% Similarity=0.116 Sum_probs=68.5
Q ss_pred EeecceEEEecCCcEEEEEEEccCC-----CCEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIV-----KVRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~-----~~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
++....+++.+|++|+|+|.+.+.+ .+.|.|||+.. ...+....... ...+||.+.. ..++++|+|.+
T Consensus 38 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~ 115 (252)
T 3bkj_L 38 TQTPLSLPVNLGEQASISCRSSQSIVHSNGHTYLEWYLQRPGQSPKLLIYQVSTRFSGVPDRFSGSG--SGTDFTLRISR 115 (252)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCBCTTSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESS
T ss_pred EeCCceEEEeCCCcEEEEEEcCCCccccCCCCcEEEEEECCCCCcEEEEEcCCcccCCcCCceEEEc--cCCEEEEEECC
Confidence 4456778999999999999998876 58899999763 22333221111 1257998864 45688999999
Q ss_pred CCCCCCEEEEEeecCCCC--eeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQPYTT--TSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~~--~s~~~~L~V~g 108 (113)
++.+|+|.|+|.+..... ....+.|.|.+
T Consensus 116 v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 146 (252)
T 3bkj_L 116 VEAEDLGVYYCFQASLVPLTFGAGTKLELKR 146 (252)
T ss_dssp CCGGGCEEEEEEECSBSSCEECCCEEEEECC
T ss_pred CCcccCEEEEEEEEcCCccEECCCEEEEEeC
Confidence 999999999999964322 22334566654
No 258
>1ymm_D T cell receptor alpha chain; protein-protein complex, T cell repertoire, auto-immunity, I system; HET: NAG; 3.50A {Homo sapiens} SCOP: b.1.1.1
Probab=99.56 E-value=5.3e-17 Score=112.53 Aligned_cols=99 Identities=12% Similarity=0.114 Sum_probs=62.5
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC----eEEEe-cceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW----HILTS-GVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~----~~l~~-~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++....+++.+|++|+|+|.+++.. ..|.|||+..+ .+++. +......++||.+..+..++.++|+|++++.+|
T Consensus 5 ~Q~p~~v~v~~G~~v~L~C~~s~~~-~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~Rf~~~~~~~~~~~sL~I~~~~~~D 83 (207)
T 1ymm_D 5 EEDPQALSIQEGENATMNCSYKTSI-NNLQWYRQNSGRGLVHLILIRSNEREKHSGRLRVTLDTSKKSSSLLITASRAAD 83 (207)
T ss_dssp ----CCCCCSSCCCCCBCCBCSSCE-EEEEEECCCSSCCCCCCCEEESSSCCCCSSSCCBCCBGGGTBCCBCCSSCCSTT
T ss_pred EECCCEEEEeCCCCEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEcCCCccccCCCEEEEEcCCCCEEEEEECcCCccc
Confidence 3445567889999999999998766 78999998742 22222 211123468998865555678999999999999
Q ss_pred CEEEEEeecCC---CC--eeEEEEeceecc
Q psy14080 85 NGTYECQAQPY---TT--TSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~---~~--~s~~~~L~V~g~ 109 (113)
+|+|+|++... .. ......|.|++.
T Consensus 84 sg~Y~C~~~~~~~~~~~~~g~gt~L~V~~~ 113 (207)
T 1ymm_D 84 TASYFCATDTTSGTYKYIFGTGTRLKVLAN 113 (207)
T ss_dssp CSCCEEEEEETTSCSCEEECC---------
T ss_pred CceEEEEEEcCCCcceeeECCCEEEEEECC
Confidence 99999999642 11 123356777654
No 259
>2znx_A SCFV; fluorotryptohpan, 5-fluorotryptophan, 19F, single chain FV, allergen, antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase; HET: FTR 1PG; 2.30A {Homo sapiens} PDB: 2znw_A*
Probab=99.56 E-value=3e-14 Score=99.21 Aligned_cols=95 Identities=13% Similarity=0.049 Sum_probs=65.0
Q ss_pred eEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---e-EEEe---cceEE--cCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 15 ISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---H-ILTS---GVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~-~l~~---~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
..++.+|++++|.|.+.+.+ .+.|.|||+.++ . ++.. +...+ ..+.||.+..+.....++|.|.+++.+
T Consensus 131 ~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~~~~~~~l~~~~~~g~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~ 210 (242)
T 2znx_A 131 PSLVKPSQTLSLTCSVTGDSITSDYXSXIRKFPGNRLEYMGYVSYSGSTYYNPSLKSRISITRDTSKNQYYLDLNSVTTE 210 (242)
T ss_dssp CSEECTTSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTSCEEECGGGTTCEEEEEETTTTEEEEEECSCCGG
T ss_pred cceecCCCeEEEEEEEEccccCCcceeeEeeCCCCCcEEEEEEecCCccccCccccCcEEEEecCCCCEEEEEECCCCcC
Confidence 35689999999999998764 478999997532 1 1221 11111 126799987655567789999999999
Q ss_pred CCEEEEEeecCCCCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
|+|.|+|.+......-....|.|...
T Consensus 211 D~G~Y~C~a~~~~~fG~gt~l~v~~~ 236 (242)
T 2znx_A 211 DTATYYCANXDGDYXGQGTLVTVSAA 236 (242)
T ss_dssp GCEEEEEEETTSSCBCCCEEEEECCC
T ss_pred cCEEEEEeccCCcccCCCeEEEEEec
Confidence 99999999965322223344555443
No 260
>2ghw_B Anti-SARS SCFV antibody, 80R; S protein, neutralizing antibody, virus/viral protein/antibiotic complex; 2.30A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1
Probab=99.56 E-value=2.8e-14 Score=98.92 Aligned_cols=97 Identities=15% Similarity=0.112 Sum_probs=70.1
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEEe-cceE-EcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILTS-GVLT-YTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~~-~~~~-~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
......+++.+|++++|.|.+.+.+.+.|.|||+.++ ..+.. .... ...+.||.+. .....++|.|.+++.+|
T Consensus 139 ~~~~~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~--~~~~~~~L~I~~v~~~D 216 (247)
T 2ghw_B 139 TQSPATLSLSPGERATLSCRASQSVRSNLAWYQQKPGQAPRPLIYDASTRATGIPDRFSGS--GSGTDFTLTISRLEPED 216 (247)
T ss_dssp EEECSEEEECTTSCEEEEEEESSCCTTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEE--CSSSEEEEEECSCCGGG
T ss_pred EccCCEEEecCCCcEEEEEEeCCCccceEEEEEECCCCCcEEEEEEeccCCCccCCCEEEe--cCCCeEEEEECcCCHHH
Confidence 4445677899999999999999888789999997532 22221 1111 1235799875 34567899999999999
Q ss_pred CEEEEEeecCCC--CeeEEEEeceec
Q psy14080 85 NGTYECQAQPYT--TTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~~--~~s~~~~L~V~g 108 (113)
+|.|+|.+.... .......|.|+.
T Consensus 217 ~G~Y~C~a~~~~~~~~g~~t~l~V~~ 242 (247)
T 2ghw_B 217 FAVYYCQQRSNWPPTFGQGTKVEVKS 242 (247)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEECC
T ss_pred CEEEEEEEccCCCceEcCCEEEEECC
Confidence 999999996532 344566787773
No 261
>2cry_A KIN of IRRE-like protein 3; IG fold, KIN of irregular chiasm-like protein 3, nephrin- like 2, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.1.1
Probab=99.56 E-value=1.1e-15 Score=96.78 Aligned_cols=99 Identities=17% Similarity=0.259 Sum_probs=74.2
Q ss_pred cCCceeeEeecceEEEecCCcEEEEEEEccCCCCE-EEEEecCCCeEEEecceEEcCCCCEEEEEeCCCC--cEEEEEcc
Q psy14080 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVR-VSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSD--DWNLQIKF 79 (113)
Q Consensus 3 ~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~-V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~--~~~L~I~~ 79 (113)
..|+.|.. ...+.+.+|+++.|.|.+.+.+.+. |.|+|.. ..+..+ .+.||.+......+ ..+|.|.+
T Consensus 12 ~~~P~i~~--~~~~~~~~G~~v~l~C~~~g~P~p~~i~W~~~~--~~l~~~-----~~~~~~~~~~~~~~~~~~~L~I~~ 82 (122)
T 2cry_A 12 NGPPIISS--TQTQHALHGEKGQIKCFIRSTPPPDRIAWSWKE--NVLESG-----TSGRYTVETISTEEGVISTLTISN 82 (122)
T ss_dssp CSSCCEEE--ECCCCCCTTSCCCCCEEECCSSCCSEEEEESSS--CEECSE-----EETTEEEEEEEETTEEEEEEECTT
T ss_pred ecCCCccC--CCeEEEecCCCEEEEEEEeecCCCcEeEEEECC--EEccCC-----CCCCEEEEEecCCCceEEEEEEcC
Confidence 34666655 5677899999999999999998876 9999853 223211 24688774211122 55999999
Q ss_pred CCCCCC-EEEEEee-cCCCCeeEEEEeceeccc
Q psy14080 80 LQKRDN-GTYECQA-QPYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 80 v~~~D~-G~Y~C~~-~~~~~~s~~~~L~V~g~~ 110 (113)
++.+|+ |.|.|.+ +..+..+..+.|.|.+..
T Consensus 83 v~~~D~~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 115 (122)
T 2cry_A 83 IVRADFQTIYNCTAWNSFGSDTEIIRLKEQGSE 115 (122)
T ss_dssp CCHHHHHSCEEEEEECSSCEEEEEECCCCSCSS
T ss_pred CChhhCCceEEEEEECCCCeEEEEEEEEECCCC
Confidence 999999 9999999 566888889999998753
No 262
>2cr3_A Basic fibroblast growth factor receptor 1; IG fold, FGFR1, BFGF-R, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.56 E-value=9.4e-15 Score=89.47 Aligned_cols=82 Identities=16% Similarity=0.178 Sum_probs=63.8
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
...+++.+|++++|.|.+.+.+ +.|.|+|... .+ ..+.|+.+. ..+|.|.+++.+|+|.|+|.+
T Consensus 10 p~~~~v~~G~~v~L~C~~~g~p-p~i~W~k~g~--~~-------~~~~~~~~~------~~~L~i~~v~~~D~G~Y~C~a 73 (99)
T 2cr3_A 10 VESFLVHPGDLLQLRCRLRDDV-QSINWLRDGV--QL-------AESNRTRIT------GEEVEVQDSVPADSGLYACVT 73 (99)
T ss_dssp EEECCBCTTSCEEEECCCCSSC-CEEEEEESSS--BC-------CCCSSEEEC------SSEEEETTCCTTTCEEEEEEE
T ss_pred CcCeEEeCCCcEEEEEEecCCC-CeEEEEECCE--EC-------CCCCcEEEE------CCEEEEccCCHHHCEEEEEEE
Confidence 4556788999999999999876 7999998541 11 134577653 349999999999999999999
Q ss_pred c-CCCCeeEEEEeceeccc
Q psy14080 93 Q-PYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 93 ~-~~~~~s~~~~L~V~g~~ 110 (113)
. ..+..+..+.|.|.+..
T Consensus 74 ~n~~g~~~~~~~l~V~~~~ 92 (99)
T 2cr3_A 74 SSPSGSDTTYFSVNVSDAL 92 (99)
T ss_dssp EETTEEEEEEEEECBCSCC
T ss_pred EeCCceEEEEEEEEEecCC
Confidence 4 55677888899987653
No 263
>3s35_X Vascular endothelial growth factor receptor 2; antibody, KDR, VEGF receptor, cancer, immune system-transfer complex; HET: NAG; 2.20A {Homo sapiens} PDB: 3s36_X 3s37_X
Probab=99.56 E-value=2.8e-14 Score=89.84 Aligned_cols=96 Identities=15% Similarity=0.031 Sum_probs=63.0
Q ss_pred ecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeC-CCCcEEEEEccCCCCCCEEE
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTD-GSDDWNLQIKFLQKRDNGTY 88 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~-~~~~~~L~I~~v~~~D~G~Y 88 (113)
....+.+.+|++++|.|.+.+. +.+.+.|+|.... + ... ......+....... .....+|.|.+++.+|+|.|
T Consensus 14 p~~~v~v~~G~~v~L~C~~~g~p~~~~~i~W~~~~~~-~-~~~--~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~DsG~Y 89 (122)
T 3s35_X 14 PSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSK-H-QHK--KLVNRDLKTQSGSEMKKFLSTLTIDGVTRSDQGLY 89 (122)
T ss_dssp SCSCEEEEETCCEEEEEEEEECTTCCCEEEEECSCTT-C-CHH--HHBCCSCCEEEETTEEEEEEEEEESSCCGGGCEEE
T ss_pred CCCCEEEecCCeEEEEEEEEcCCCCcEEEEEECCCcc-c-CCc--eeeeeccccccCCceeeEEEEEEECCCCcccCEEE
Confidence 3445689999999999999984 4568999985431 1 000 00001111111000 01356899999999999999
Q ss_pred EEeec-CCCCeeEEEEeceecccc
Q psy14080 89 ECQAQ-PYTTTSHSQNAPGLGDLL 111 (113)
Q Consensus 89 ~C~~~-~~~~~s~~~~L~V~g~~~ 111 (113)
+|.+. ..+..+..+.|.|.+.-.
T Consensus 90 ~C~a~n~~g~~~~~~~l~V~~~p~ 113 (122)
T 3s35_X 90 TCAASSGLMTKKNSTFVRVHEKPF 113 (122)
T ss_dssp EEEEECSSCEEEEEEEEEEEEEEC
T ss_pred EEEEccCCCceEEEEEEEEeccCe
Confidence 99995 556778889999987643
No 264
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.56 E-value=2.3e-14 Score=98.72 Aligned_cols=85 Identities=18% Similarity=0.153 Sum_probs=64.2
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---Ce-EEEec-ceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WH-ILTSG-VLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~-~l~~~-~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
......+++.+|++++|.|.+.+.+.+.|.|||+.. .. ++... ......++||.+..+...+.++|.|.+++.+|
T Consensus 131 ~~~p~~~~v~~G~~v~L~C~~~~~p~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~~D 210 (238)
T 2p1y_A 131 RQSPQSLTVWEGETAILNCSYENSAFDYFPWYQQFPGEGPALLISILSVSDKKEDGRFTIFFNKREKKLSLHIADSQPGD 210 (238)
T ss_dssp EEECSEEEEETTSCEEEEEECCCTTCCEEEEEEECTTSCCEEEEEEETTCSEEEETTEEEEEETTTTEEEEEETTCCGGG
T ss_pred EccCceEEEeCCCeEEEEEEEecCCCCcEEEEEECCCCCCEEEEEEccCCCcccCCceEEEecCCCCeEEEEEcCCCHHH
Confidence 344567789999999999999988888999999763 22 22221 11122357998875556678899999999999
Q ss_pred CEEEEEeecC
Q psy14080 85 NGTYECQAQP 94 (113)
Q Consensus 85 ~G~Y~C~~~~ 94 (113)
+|.|+|.+..
T Consensus 211 ~G~Y~C~a~n 220 (238)
T 2p1y_A 211 SATYFCAAID 220 (238)
T ss_dssp CEEEEEEEEE
T ss_pred CEEEEEEEee
Confidence 9999999954
No 265
>1wwb_X Protein (brain derived neurotrophic factor receptor TRKB); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 2.10A {Homo sapiens} SCOP: b.1.1.4 PDB: 1hcf_X
Probab=99.56 E-value=5.5e-14 Score=86.97 Aligned_cols=95 Identities=19% Similarity=0.061 Sum_probs=67.4
Q ss_pred ccCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEE--EEe-CCCCcEEEEEc
Q psy14080 2 VAAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQV--IHT-DGSDDWNLQIK 78 (113)
Q Consensus 2 ~~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~--~~~-~~~~~~~L~I~ 78 (113)
|..|+.|..... ...|+.+.|.|.+.+.+.+.|.|+|. +..+. .+.|+.. ... ......+|.|.
T Consensus 1 V~~pP~i~~~~~----~~~~~~~~~~c~v~G~P~P~i~W~k~--g~~l~-------~~~~~~~~~~~~~~~~~~~~L~I~ 67 (103)
T 1wwb_X 1 VHFAPTITFLES----PTSDHHWCIPFTVKGNPKPALQWFYN--GAILN-------ESKYICTKIHVTNHTEYHGCLQLD 67 (103)
T ss_dssp CCCCCCCCCCCC----CCCCCEEEEEEEEECSSCCEEEEEET--TEEEC-------CCSSEEEEEEEECSSEEEEEEEEE
T ss_pred CCCCCEEEeccC----ceECcEEEEEEEEEEeCCCEEEEEEC--CEECC-------CCCcEeEEEEecCCcEEEEEEEEC
Confidence 345777653322 24688999999999999999999983 33432 2334322 111 11124569999
Q ss_pred cCCCCCCEEEEEee-cCCCCeeEEEEeceecc
Q psy14080 79 FLQKRDNGTYECQA-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~-~~~~~~s~~~~L~V~g~ 109 (113)
+++.+|+|.|.|.+ +..+..+..+.|.|.+.
T Consensus 68 ~v~~~D~G~Y~C~A~N~~G~~~~~~~l~V~~~ 99 (103)
T 1wwb_X 68 NPTHMNNGDYTLIAKNEYGKDEKQISAHFMGW 99 (103)
T ss_dssp SCCGGGCEEEEEEEECSSCEEEEEEEECCSCC
T ss_pred CCCcccCEEEEEEEEeCCCcEeEEEEEEECCC
Confidence 99999999999999 56688899999999864
No 266
>3gkz_A Anti-methamphetamine single chain FV; therapeutic antibody, MDMA, IGG, immune system; HET: B40; 1.90A {Mus musculus} PDB: 3gm0_A* 1rvf_L 3ab0_C 2a0l_C 3iy5_A
Probab=99.56 E-value=3.8e-14 Score=99.04 Aligned_cols=102 Identities=14% Similarity=0.096 Sum_probs=71.3
Q ss_pred eeeEeecceEEEecCCcEEEEEEEccCCCC-EEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 7 GILTAFGQISTGFLAVFSYSDKTVRDIVKV-RVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 7 ~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~-~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
.........+++.+|++++|.|.+.+.+.+ .|.|||+.. ...+....... ...+||.+.. ....++|.|.++
T Consensus 142 ~~~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v 219 (257)
T 3gkz_A 142 IVLTQSPAIMSASPGEKVTLTCSASSSVSSSHLYWYQQKPGSSPKLWIYSTSNLASGVPARFSGSG--SGTSYSLTISSM 219 (257)
T ss_dssp CCEECSCSEEEECTTCCEEEEEEESSCCCGGGEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSC
T ss_pred eEEEcCCceEEEeCCCcEEEEEEEccCccceEEEEEEECCCCCcEEEEEEccccCCCcCCCEEEec--CCCEEEEEECCC
Confidence 344455566889999999999999987766 899999753 22232222111 1247888753 346789999999
Q ss_pred CCCCCEEEEEeecCCC--CeeEEEEeceeccc
Q psy14080 81 QKRDNGTYECQAQPYT--TTSHSQNAPGLGDL 110 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~--~~s~~~~L~V~g~~ 110 (113)
+.+|+|.|+|++.... .......|.|+...
T Consensus 220 ~~~D~G~Y~C~~~~~~~~~fg~gt~l~v~~~~ 251 (257)
T 3gkz_A 220 EAEDAASYFCHQWSSFPFTFGSGTKLEIKRAP 251 (257)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEECCC-
T ss_pred ChHHCEEEEEEEccCCceEEcCCEEEEEEeCC
Confidence 9999999999996532 33455677776544
No 267
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.56 E-value=2.7e-14 Score=100.24 Aligned_cols=82 Identities=22% Similarity=0.248 Sum_probs=61.0
Q ss_pred ceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEE-Eec---ceEEc--CCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHIL-TSG---VLTYT--NDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l-~~~---~~~~~--~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
..+++.+|++|+|.|.+.+.+ .+.|.|||+.. ...+ ... ...+. .++||.+..+...+.++|+|.++++
T Consensus 8 ~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 87 (257)
T 1f3r_B 8 GPGLVRPSETLSLTCTVSGFSLTSFSVSWVRHPSGKGPEWMGRMWYDGYTAYNSALKSRLSISRDTSKNQVFLKMNSLQT 87 (257)
T ss_dssp CCSEECTTSEEEEEEEEESSCTTTSCCEEEEEETTSCCEEEEEECSSSCEEECSSSSTTEEEEEETTTTEEEEEEESCCT
T ss_pred CCccccCCceEEEEEEEecccCCCccEEEEEeCCCCCcEEEEEEecCCceeeCcccCCcEEEEEECCCCEEEEEECCCCc
Confidence 346899999999999998764 68899999752 2222 211 11111 2579998765556789999999999
Q ss_pred CCCEEEEEeecCC
Q psy14080 83 RDNGTYECQAQPY 95 (113)
Q Consensus 83 ~D~G~Y~C~~~~~ 95 (113)
+|+|.|+|.+...
T Consensus 88 ~DsG~Y~C~a~n~ 100 (257)
T 1f3r_B 88 DDTGTYYCTRDLY 100 (257)
T ss_dssp TCCEEEEEEEESS
T ss_pred ccCEEEEEEEccc
Confidence 9999999999653
No 268
>2eo1_A OBSCN protein, cDNA FLJ14124 FIS, clone mamma1002498; beta-sandwich, IG-fold, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.55 E-value=8.8e-15 Score=89.62 Aligned_cols=81 Identities=15% Similarity=0.184 Sum_probs=61.3
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeec
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQ 93 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 93 (113)
.++++.+|++++|.|.+. .+.+.|.|||.. ..+ ..+.|+.+.. +....+|.|.+++.+|+|.|+|.+.
T Consensus 19 ~~~~v~~G~~v~L~C~~~-~p~~~v~W~k~g--~~~-------~~~~~~~~~~--~~~~~~L~I~~~~~~D~G~Y~C~a~ 86 (102)
T 2eo1_A 19 REVQAEAGASATLSCEVA-QAQTEVTWYKDG--KKL-------SSSSKVRVEA--VGCTRRLVVQQAGQAEAGEYSCEAG 86 (102)
T ss_dssp EEEEEETTCCEEECCBCS-CSSSCCEEEETT--EEC-------CCCSSEEEEE--ETTEEEEEETTCCTTTCSCEEEEET
T ss_pred ccEEEeCCCcEEEEEEec-CCCCceEEEECC--EEC-------CCCCCEEEEE--cCCEEEEEECCCCcccCEEEEEEcC
Confidence 467899999999999998 677899999843 222 2356887763 2345799999999999999999994
Q ss_pred CCCCeeEEEEeceecc
Q psy14080 94 PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 94 ~~~~~s~~~~L~V~g~ 109 (113)
. .+..+.|.|.+.
T Consensus 87 ~---~~~~~~l~V~~p 99 (102)
T 2eo1_A 87 G---QQLSFRLQVAGQ 99 (102)
T ss_dssp T---EECCEEEEEESC
T ss_pred C---CcEEEEEEEeCC
Confidence 3 334467777653
No 269
>2zg1_A Sialic acid-binding IG-like lectin 5; siglec-5 inhibitory receptor, two-domain structure, V-SET, C2-SET, IG-like domain, 6'-sialyllactose complex; HET: SIA; 2.70A {Homo sapiens} PDB: 2zg3_A* 2zg2_A
Probab=99.55 E-value=6.7e-15 Score=99.65 Aligned_cols=99 Identities=12% Similarity=0.109 Sum_probs=68.4
Q ss_pred EeecceEEEecCCcEEEEEEEccC-------CCCEEEEEecCCC----eEEEecce----EEcCCCCEEEEEeCCCCcEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI-------VKVRVSWVRRRDW----HILTSGVL----TYTNDARFQVIHTDGSDDWN 74 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~-------~~~~V~W~k~~~~----~~l~~~~~----~~~~~~R~~~~~~~~~~~~~ 74 (113)
.+..+.+++.+|++|+|+|.+... +.+.|.|||.... .++..... .....+||.+..+...++++
T Consensus 4 ~~~p~~v~v~~G~~v~L~C~~~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~s 83 (214)
T 2zg1_A 4 LQVQKSVTVQEGLCVLVPCSFSYPWRSWYSSPPLYVYWFRDGEIPYYAEVVATNNPDRRVKPETQGRFRLLGDVQKKNCS 83 (214)
T ss_dssp EECCSEEEEETTCCEEECCEEECCCCCCSCCCCEEEEEEETTCCGGGCCBSEESCTTSCBCTTTTTTEEECSCGGGTBCC
T ss_pred eeCCcEEEEecCccEEEeeeeecCCcccCCCCceEEEEEecCCCCcccceEecCCcccccCccccCceEEeccCCCCeEE
Confidence 345667899999999999999854 4678999997642 12221110 01234799876433346789
Q ss_pred EEEccCCCCCCEEEEEeecCCC-Ce----eEEEEeceec
Q psy14080 75 LQIKFLQKRDNGTYECQAQPYT-TT----SHSQNAPGLG 108 (113)
Q Consensus 75 L~I~~v~~~D~G~Y~C~~~~~~-~~----s~~~~L~V~g 108 (113)
|+|.+++.+|+|.|+|.+.... .. +..+.|.|.+
T Consensus 84 L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~l~V~~ 122 (214)
T 2zg1_A 84 LSIGDARMEDTGSYFFRVERGRDVKYSYQQNKLNLEVTA 122 (214)
T ss_dssp EEECSCCGGGCEEEEEEEEETTTEEEECCSSCEEEEEEC
T ss_pred EEEccCCHhhCceEEEEEEcCCCceeeecCCceEEEEec
Confidence 9999999999999999996543 11 2357777765
No 270
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=99.55 E-value=2e-14 Score=102.08 Aligned_cols=80 Identities=13% Similarity=0.159 Sum_probs=60.4
Q ss_pred ceEEEecCCcEEEEEEEcc--CCCCEEEEEecCC---CeEE-Eecc----eEE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 14 QISTGFLAVFSYSDKTVRD--IVKVRVSWVRRRD---WHIL-TSGV----LTY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~--~~~~~V~W~k~~~---~~~l-~~~~----~~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
..+++.+|++|+|+|.+++ .....|.|||+.. ...+ .... ... ...+||.+..+...++++|+|++++
T Consensus 31 ~~~~~~~G~~v~L~C~~s~~~~~~~~v~W~rq~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~v~ 110 (267)
T 3u1s_H 31 GAEVKKPGSSVKVSCKASGNSFSNHDVHWVRQATGQGLEWMGWMSHEGDKTGLAQKFQGRVTITRDSGASTVYMELRGLT 110 (267)
T ss_dssp CCEEECTTCCEEEEEEEGGGGGGTSEEEEEEECTTSCCEEEEEECTTSSCEEECGGGTTTEEEEECGGGCCEEEEECSCC
T ss_pred CCEEEeCCCcEEEEEEeeCCccCCCEEEEEEECCCCCcEEEEEEeCCCCceecCcccCCcEEEEEcCCCCEEEEEECCCC
Confidence 4578999999999999975 3457899999873 2222 2211 111 1257999886555678999999999
Q ss_pred CCCCEEEEEeec
Q psy14080 82 KRDNGTYECQAQ 93 (113)
Q Consensus 82 ~~D~G~Y~C~~~ 93 (113)
.+|+|+|+|++.
T Consensus 111 ~~DsG~Y~C~~~ 122 (267)
T 3u1s_H 111 ADDTAIYYCLTG 122 (267)
T ss_dssp GGGCEEEEEEEE
T ss_pred hhhCEEEEEEEC
Confidence 999999999996
No 271
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.55 E-value=8.3e-14 Score=92.98 Aligned_cols=95 Identities=12% Similarity=0.009 Sum_probs=71.2
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.+. ....++++.+|+++.|.|.+.+.+.+.+.|+|.. ..+. ..+.|+.+... .++.++|.|.+++.+
T Consensus 3 ~~P~~~-~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~--~~~~------~~~~~~~~~~~-~~~~~~L~i~~~~~~ 72 (197)
T 2j8h_A 3 MAPHFK-EELRNLNVRYQSNATLVCKVTGHPKPIVKWYRQG--KEII------ADGLKYRIQEF-KGGYHQLIIASVTDD 72 (197)
T ss_dssp CCCEEE-ECCCCEEEETTSCEEEEEEEECSSCCEEEEEETT--EECC------CCSSSEEEEEE-TTTEEEEEECSCCGG
T ss_pred CCCEEE-EcCCccEEcCCCEEEEEEEEeecCCCEEEEEECC--EECc------cCCCcEEEEEc-CCCEEEEEECcCCHH
Confidence 355554 3446789999999999999998888999999843 2221 13467776542 345679999999999
Q ss_pred CCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
|+|.|.|.+. ..+..+..+.|.|..
T Consensus 73 d~G~Y~C~~~n~~g~~~~~~~l~V~~ 98 (197)
T 2j8h_A 73 DATVYQVRATNQGGSVSGTASLEVEV 98 (197)
T ss_dssp GCSEEEEEEEETTEEEEEEEEEEEEE
T ss_pred hCEEEEEEEEECCCceeEEEEEEEcC
Confidence 9999999995 445667778888765
No 272
>3ux9_B SCFV antibody; five helices, long loop connecting helix, hydrophobic intera cytokine-immune system complex; 2.80A {Homo sapiens}
Probab=99.55 E-value=5.2e-14 Score=98.18 Aligned_cols=82 Identities=16% Similarity=0.130 Sum_probs=60.8
Q ss_pred ceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Ee--cc-eE---EcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TS--GV-LT---YTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~--~~-~~---~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
....+.+|++|+|.|.+.+.+ .+.|.|||+..+ ..+ .. +. .. ....+||.+..+.....++|+|.+++
T Consensus 142 ~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~ 221 (256)
T 3ux9_B 142 GGGLVQPGGSLRLSCAASGFTFSSYAMSWVRQAPGKGLEWVSAISGSGGSTYYADSVKGRFTISRDNSKNTLYLQMNSLR 221 (256)
T ss_dssp CCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECSSSSCEEECGGGTTTEEEEEETTTTEEEEEECSCC
T ss_pred CCeEEcCCCeEEEEEEEeCCcccccEEEEEEECCCCCcEEEEEEccCCCceecCccccceEEEEecCCCCEEEEEECCCC
Confidence 345689999999999998765 689999998532 112 11 10 00 02356999886666678899999999
Q ss_pred CCCCEEEEEeecCC
Q psy14080 82 KRDNGTYECQAQPY 95 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~ 95 (113)
.+|+|.|+|++...
T Consensus 222 ~~DsG~Y~C~~~~~ 235 (256)
T 3ux9_B 222 AEDTAVYYCARYID 235 (256)
T ss_dssp GGGCEEEEEEEEET
T ss_pred hhhCEEEEEEEEcC
Confidence 99999999999653
No 273
>2p1y_A Bispecific alpha/beta TCR; autoimmunity, immunoglobulin fold, diabody, immune system; 2.42A {Mus musculus} PDB: 1bwm_A
Probab=99.55 E-value=4.1e-14 Score=97.43 Aligned_cols=83 Identities=10% Similarity=0.097 Sum_probs=61.0
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEE-ecce--E--EcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILT-SGVL--T--YTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~-~~~~--~--~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
++....+++.+|++|+|+|. .+.+.+.|.|||+..+ ..+. .... . .....||.+.. ...+.++|+|.+++
T Consensus 4 ~q~p~~~~v~~G~~v~L~C~-~~~~~~~i~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~L~I~~v~ 81 (238)
T 2p1y_A 4 TQSPRNKVAVTGGKVTLSCN-QTNNHNNMYWYRQDTGHGLRLIHYSYGAGSTEKGDIPDGYKASR-PSQENFSLILELAT 81 (238)
T ss_dssp EEECSEEEEETTCCEEEEEE-ECSCCSEEEEEEEETTTEEEEEEEESSTTCCEECSSCTTCEEEC-CSSSBCEEEESSCC
T ss_pred eECccceEEeCCCEEEEEee-cCCCCccEEEEEECCCCCcEEEEEEecCcceeCCCccceEEEEc-cCCceEEEEEecCC
Confidence 34567789999999999999 6677889999997532 2222 1110 0 11256998864 34567899999999
Q ss_pred CCCCEEEEEeecC
Q psy14080 82 KRDNGTYECQAQP 94 (113)
Q Consensus 82 ~~D~G~Y~C~~~~ 94 (113)
.+|+|.|+|.+..
T Consensus 82 ~~DsG~Y~C~~~~ 94 (238)
T 2p1y_A 82 PSQTSVYFCASGD 94 (238)
T ss_dssp GGGCEEEEEEEEC
T ss_pred cccCeeEEEEEEe
Confidence 9999999999964
No 274
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.55 E-value=1.6e-13 Score=92.37 Aligned_cols=93 Identities=13% Similarity=0.102 Sum_probs=72.5
Q ss_pred ceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 6 GGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 6 ~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
+.+.........+.+|+++.|.|.+.+.+.+.+.|+|. +..+ ..+.|+.+... +....+|.|.+++.+|+
T Consensus 117 p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~--~~~~-------~~~~~~~~~~~-~~~~~~L~i~~~~~~d~ 186 (212)
T 2r15_A 117 ARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKN--EKAL-------AQTDHCNLKFE-AGRTAYFTINGVSTADS 186 (212)
T ss_dssp CEEEEBCCSEEEEETTCCEEEEEEEECSSCCEEEEEET--TEEE-------CCCSSEEEEEE-TTTEEEEEESSCCGGGC
T ss_pred CcccccCCCcEEEccCCeEEEEEEEcCCCCceEEEEEC--CeEC-------ccCCCEEEEEc-CCCEEEEEEcCcchHHC
Confidence 34444556678899999999999999999999999984 3333 24567877642 34568999999999999
Q ss_pred EEEEEee-cCCCCeeEEEEeceec
Q psy14080 86 GTYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 86 G~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
|.|.|.+ +..+..+..+.|.|..
T Consensus 187 G~Y~C~a~N~~g~~~~~~~l~V~~ 210 (212)
T 2r15_A 187 GKYGLVVKNKYGSETSDFTVSVFI 210 (212)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred eEEEEEEEcCCCcEEEEEEEEEEc
Confidence 9999999 4567778888888864
No 275
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.55 E-value=1.7e-14 Score=103.35 Aligned_cols=97 Identities=9% Similarity=0.091 Sum_probs=67.4
Q ss_pred ecceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEEEe-c---ce-EE--cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHILTS-G---VL-TY--TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l~~-~---~~-~~--~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
....+++.+|++|+|+|.+++.+ .+.|.|||+.. ...+.. . .. .. ..++||.+..+...+.++|+|.+
T Consensus 28 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~~ 107 (291)
T 2gki_A 28 QSGPELVKPGASVKMSCKASGYTFTSYVMHWVKQKPGQGLEWIGYINPYNDGTKYNEKFKGKATLTSDKSSSTAYMELSS 107 (291)
T ss_dssp ECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGBTTBCEEEEGGGTEEEEEECS
T ss_pred cCCcEEecCCCCEEEEEeccCCcccccEEEEEEECCCCCcEEEEEEecCCCccccCcccCCCEEEEEeCCCCEEEEEECc
Confidence 34578999999999999998765 57899999863 222221 1 00 11 12479988754445689999999
Q ss_pred CCCCCCEEEEEeecCCC----C--eeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQPYT----T--TSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~----~--~s~~~~L~V~g 108 (113)
++.+|+|.|+|.+.... . ....+.|.|..
T Consensus 108 v~~~DsG~Y~C~~~~~~~g~~~~~~~~~~~L~V~~ 142 (291)
T 2gki_A 108 LTSEDSAVYYCARGAYKRGYAMDYWGQGTSVTVSS 142 (291)
T ss_dssp CCGGGCEEEEEEEECGGGTTCEEEECCCEEEEECC
T ss_pred CCHHHCEEEEEEEeccccccccceeCCCcEEEEec
Confidence 99999999999996532 1 12234676665
No 276
>2c1o_A IGK-C protein; FAB fragment, enantioselective, finrozole, immune system, antibody, ENA11His antibody, immunoglobulin domain; 2.75A {Mus musculus}
Probab=99.55 E-value=6.3e-14 Score=97.49 Aligned_cols=98 Identities=15% Similarity=0.115 Sum_probs=68.4
Q ss_pred eEeecceEEEecCCcEEEEEEEccCC-----CCEEEEEecCCC---eEEEecceEE--cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIV-----KVRVSWVRRRDW---HILTSGVLTY--TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~-----~~~V~W~k~~~~---~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
.+.....+++.+|++|+|+|.+.+.+ .+.|.|||+.++ ..+....... ..+.||.+.. +.+.++|+|.
T Consensus 41 ~~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~ 118 (254)
T 2c1o_A 41 MTQSPLTLSVTIGQPASISCKSSQSLLYSNGKTYLNWLLQRPGQSPKRLIYLVSKLDSGDPDRFTGSG--SGTDFTLKIS 118 (254)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCBCSSSCBCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEES
T ss_pred EEeCCceEEecCCCcEEEEeeccCcccccCCCCceEEEEeCCCCCceEEEEeccccCCCccceEEEec--CCCEEEEEEC
Confidence 44556778999999999999999876 488999997632 2332221111 1247998864 4567899999
Q ss_pred cCCCCCCEEEEEeecCCCC--eeEEEEeceec
Q psy14080 79 FLQKRDNGTYECQAQPYTT--TSHSQNAPGLG 108 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~~--~s~~~~L~V~g 108 (113)
+++.+|+|.|+|.+..... ....+.|.|.+
T Consensus 119 ~v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~ 150 (254)
T 2c1o_A 119 RVEAEDLGIYYCVQGSHFPPTFGAGTKLELKR 150 (254)
T ss_dssp SCCGGGCSEEEEEECSSSSCEEBCCEEEEECC
T ss_pred cCCcccCEEEEEEEEcCcceEecCCEEEEECC
Confidence 9999999999999964321 22234555543
No 277
>3juy_B 3B3 single chain variant HIV-1 antibody; envelope protein GP120, broadly neutralizing antibody, 3B3 single chain variable fragment, immune system; 2.50A {Homo sapiens}
Probab=99.55 E-value=5.8e-14 Score=98.19 Aligned_cols=98 Identities=17% Similarity=0.174 Sum_probs=69.5
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCCC-CEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIVK-VRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~~-~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
........+++.+|++|+|.|.+.+.+. +.|.|||+.+ ...+....... ..++||.+.. +...++|.|.+++
T Consensus 151 ~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~ 228 (256)
T 3juy_B 151 VLTQAPGTLSLSPGERATFSCRSSHSIRSRRVAWYQHKPGQAPRLVIHGVSNRASGISDRFSGSG--SGTDFTLTITRVE 228 (256)
T ss_dssp CEEEECSEEEECTTSCEEEEEEESSCCTTCCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCC
T ss_pred EEEecCCeEEEeCCCCEEEEEEECCCcCCeeEEEEEECCCCCcEEEEEecCccCCccCCcEEEEc--cCCEEEEEECCCC
Confidence 3455567789999999999999998765 8999999752 23333222111 1357998764 3467899999999
Q ss_pred CCCCEEEEEeecCCC--CeeEEEEecee
Q psy14080 82 KRDNGTYECQAQPYT--TTSHSQNAPGL 107 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~--~~s~~~~L~V~ 107 (113)
.+|+|.|+|.+.... .......|.|+
T Consensus 229 ~~DsG~Y~C~~~~~~~~~~g~gt~l~V~ 256 (256)
T 3juy_B 229 PEDFALYYCQVYGASSYTFGQGTKLERK 256 (256)
T ss_dssp GGGCSEEEEEECCSSCCEECCCEEEEEC
T ss_pred HhHCEEEEEEEeeCCCceEcCCEEEEEC
Confidence 999999999996432 33445566553
No 278
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.54 E-value=1.2e-13 Score=100.83 Aligned_cols=92 Identities=20% Similarity=0.138 Sum_probs=71.8
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
..+.++.+|++++|.|.+.+.+.+.|.|+|..++..+..+. ...+.|+.+.. +....+|.|.+++.+|+|.|.|.+
T Consensus 7 ~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~g~~~~~~~--~~~~~~~~~~~--~~~~~~L~i~~v~~~D~G~Y~C~a 82 (389)
T 2jll_A 7 LKNETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGD--KSLDGRIEVKG--QHGSSSLHIKDVKLSDSGRYDCEA 82 (389)
T ss_dssp CCCEEEETTSEEEEEEEEECSSCCEEEEEETTTTEEECC----CCSSSSEEEEE--CSSEEEEEEESCCGGGCEEEEEEE
T ss_pred cCceEEeCCCeEEEEEEeecccCCeEEEEeCCCCceeccCc--CCCCCeEEEec--cCCcceEEEcccChhhCEEEEEEE
Confidence 55678999999999999999988999999964455553221 12367888763 346789999999999999999999
Q ss_pred c-CCCCeeEEEEeceec
Q psy14080 93 Q-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 93 ~-~~~~~s~~~~L~V~g 108 (113)
. ..+..+..+.|.|..
T Consensus 83 ~n~~g~~~~~~~l~V~~ 99 (389)
T 2jll_A 83 ASRIGGHQKSMYLDIEY 99 (389)
T ss_dssp ECSSCEEEEEEEEEEEE
T ss_pred EeCCCCcceEEEEEEEe
Confidence 4 556778888888864
No 279
>2pkd_A SLAM family member 5; signaling lymphocyte activation molecule, IGV, immunoglobulin variable, IGC, immunoglobulin constant, signaling protein; 2.04A {Homo sapiens}
Probab=99.54 E-value=6.1e-15 Score=93.27 Aligned_cols=91 Identities=16% Similarity=0.187 Sum_probs=61.6
Q ss_pred ecceEEEecCCcEEEEEEEccC-CCCEEEEEecCCCeEEEe--cce-----EEcCC----CCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDWHILTS--GVL-----TYTND----ARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~~~l~~--~~~-----~~~~~----~R~~~~~~~~~~~~~L~I~~ 79 (113)
.++.+.+.+|++|+|+|.+... ....|.|++. ..+... +.. ....+ +|..+. +.+++|+|.|
T Consensus 5 ~p~~V~~~~G~sVtL~c~~~~~~~~~~i~W~~~--~~ia~~~~~~~~~~~~~~~~~~~f~~Rl~l~----~~~~SL~I~n 78 (111)
T 2pkd_A 5 EIFTVNGILGESVTFPVNIQEPRQVKIIAWTSK--TSVAYVTPGDSETAPVVTVTHRNYYERIHAL----GPNYNLVISD 78 (111)
T ss_dssp CCEEEEEETTSCEEECCCCCTTCCEEEEEEESS--SEEEEEECCCSSSCCEEEECSGGGTTCEEEC----TTTCCEEECS
T ss_pred CceEEEEEeCCCEEEeCccCCCCeeeEEEEecC--CEEEEEECCCCCCcceeEEeCCCcCCcEEEe----CCCEEEEECC
Confidence 3456788899999999998752 3358999852 222221 211 11123 455443 3588999999
Q ss_pred CCCCCCEEEEEeecCCC---CeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQPYT---TTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~---~~s~~~~L~V~g 108 (113)
++.+|+|.|.|.+.... .....+.|.|.+
T Consensus 79 l~~~DsG~Y~c~i~~~~~~~~~~~~~~L~V~~ 110 (111)
T 2pkd_A 79 LRMEDAGDYKADINTQADPYTTTKRYNLQIYR 110 (111)
T ss_dssp CCGGGCEEEEEEEEESSTTSEEEEEEEEEEEC
T ss_pred CCHHHCEEEEEEEEeCCCCceEEEEEEEEEEc
Confidence 99999999999995432 356789998864
No 280
>1iga_A IGA1; immunoglobulin; NMR {Homo sapiens} PDB: 2esg_A 2qtj_A 3chn_A 1r70_B 3cm9_A
Probab=99.54 E-value=5.4e-14 Score=106.30 Aligned_cols=97 Identities=11% Similarity=0.100 Sum_probs=68.7
Q ss_pred ecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eec---c-eEE--cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSG---V-LTY--TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~---~-~~~--~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
....+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ ... . ... ...+||.+..+..++.++|+|.+
T Consensus 7 ~p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 86 (475)
T 1iga_A 7 QSGAEVKKPGASVKVSCKASGYSFTSYGLHWVRQAPGQRLEWMGWISAGTGNTKYSQKFRGRVTFTRDTSATTAYMGLSS 86 (475)
T ss_pred cCCcEEEeCCCCEEEEEEecCCCCCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEcCCCCeEEEEECC
Confidence 45668899999999999998653 578999998632 222 211 0 001 12579998765456789999999
Q ss_pred CCCCCCEEEEEeecCCC-------CeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQPYT-------TTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~~-------~~s~~~~L~V~g 108 (113)
++.+|+|.|+|++.... .....+.|.|.+
T Consensus 87 v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~~l~V~~ 122 (475)
T 1iga_A 87 LRPEDTAVYYCARDPYGGGKSEFDYWGQGTLVTVSS 122 (475)
T ss_pred CChhhCEEEEEEEeccCCCccceeeecCceEEEecc
Confidence 99999999999996432 233456777764
No 281
>3esu_F Antibody 14B7* light chain and antibody 14B7* heavy chain linked with A synthetic...; single-chain FV, monoclonal antibody, immunoglobulin; 1.30A {Mus musculus} PDB: 3et9_F 3esv_F 3etb_F 1h8n_A 1h8s_A* 1h8o_A*
Probab=99.54 E-value=3.1e-14 Score=98.84 Aligned_cols=83 Identities=13% Similarity=0.083 Sum_probs=61.2
Q ss_pred ecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Ee---cceE-E--cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TS---GVLT-Y--TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~---~~~~-~--~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
.....++.+|++++|.|.+.+.+ .+.|.|||+..+ ..+ .. +... . ...+||.+..+.....++|.|.+
T Consensus 137 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 216 (250)
T 3esu_F 137 QSGPELVKPGASVKISCKDSGYAFSSSWMNWVKQRPGQGPEWIGRIYPGDGDTNYNGKFKGKATLTADKSSSTAYMQLSS 216 (250)
T ss_dssp ECCCEEECTTCCEEEEEECCSTTGGGSEEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEEGGGTEEEEEECS
T ss_pred cCCceEEcCCceEEEEEEecCCcccCCEEEEEEECCCCCcEEEEEEeccCCccccCccccceEEEEecCCCCeEEEEECC
Confidence 34557899999999999998765 689999998421 222 11 1111 1 12579998765446678999999
Q ss_pred CCCCCCEEEEEeecC
Q psy14080 80 LQKRDNGTYECQAQP 94 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~ 94 (113)
++.+|+|.|+|++..
T Consensus 217 v~~~DsG~Y~C~~~~ 231 (250)
T 3esu_F 217 LTSVDSAVYFCARSG 231 (250)
T ss_dssp CCGGGCEEEEEEEEC
T ss_pred CCcccCEEEEEEEec
Confidence 999999999999974
No 282
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.54 E-value=4.4e-14 Score=97.12 Aligned_cols=81 Identities=14% Similarity=0.097 Sum_probs=63.4
Q ss_pred eEEEecCCcEEEEEEEccC-CCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-
Q psy14080 15 ISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA- 92 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~- 92 (113)
+..+.+|+++.|.|.+.+. +.+.|.|||. +..+. .+.|+.. ..+..+|.|.+++.+|+|.|.|.+
T Consensus 125 ~~~v~~g~~v~l~C~v~g~~P~p~i~W~k~--g~~l~-------~~~~~~~----~~~~~~L~I~~v~~~D~G~Y~C~a~ 191 (207)
T 3rbs_A 125 SWEVTGECNVLLKCKVANIKKETHIVWYKD--EREIS-------VDEKHDF----KDGICTLLITEFSKKDAGIYEVILK 191 (207)
T ss_dssp EEEEETTTEEEEEEEEESCCTTCEEEEEET--TEEEC-------CCCCCCC----SSEEEEEEETTCCGGGCEEEEEEEE
T ss_pred CcEEcCCCcEEEEEEEeCCCCCCEEEEEEC--CEECC-------CCCceEc----CCCEEEEEECCCCcccCEEEEEEEE
Confidence 3788999999999999998 8899999983 33332 2345432 234568999999999999999999
Q ss_pred cCCCCeeEEEEeceec
Q psy14080 93 QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 93 ~~~~~~s~~~~L~V~g 108 (113)
+..+..+..+.|.+.+
T Consensus 192 N~~G~~~~~~~L~~~~ 207 (207)
T 3rbs_A 192 DDRGKDKSRLKLVDEA 207 (207)
T ss_dssp ETTEEEEEEEEECCC-
T ss_pred cCCCEEEEEEEEecCC
Confidence 5667888888888754
No 283
>1qok_A MFE-23 recombinant antibody fragment; immunoglobulin, single-chain FV, anti-carcinoembryonic antigen; 2.4A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.54 E-value=2e-14 Score=102.37 Aligned_cols=98 Identities=15% Similarity=0.097 Sum_probs=68.9
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEe-cceE-EcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTS-GVLT-YTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~-~~~~-~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
.+....+++.+|++++|.|.+.+.+ +.|.|||+.+ ...+.. .... ...++||.+.. +...++|+|.+++.+|
T Consensus 166 ~~~p~~~~v~~G~~v~L~C~~~~~~-~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D 242 (282)
T 1qok_A 166 TQSPAIMSASPGEKVTITCSASSSV-SYMHWFQQKPGTSPKLWIYSTSNLASGVPARFSGSG--SGTSYSLTISRMEAED 242 (282)
T ss_dssp EEECSEEEECTTCCEEEEEEESSCC-SCCEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGG
T ss_pred ecCCCEEEEcCCCcEEEEEEecCCC-ceEEEEEECCCCCcEEEEEEecCCCCcccCCeEEec--CCCEEEEEEccCChhH
Confidence 3445677899999999999999888 8999999753 222222 1111 11357998763 3467899999999999
Q ss_pred CEEEEEeecCCC--CeeEEEEeceeccc
Q psy14080 85 NGTYECQAQPYT--TTSHSQNAPGLGDL 110 (113)
Q Consensus 85 ~G~Y~C~~~~~~--~~s~~~~L~V~g~~ 110 (113)
+|.|+|.+.... .......|.|.+..
T Consensus 243 sG~Y~C~a~~~~~~~fg~gt~l~V~~~~ 270 (282)
T 1qok_A 243 AATYYCQQRSSYPLTFGAGTKLELKRAA 270 (282)
T ss_dssp CEEEEEEECSSSSCEECCCEEEEEC---
T ss_pred CEEEEEEEeeCCCceEeCCEEEEEeccc
Confidence 999999996432 34556788887754
No 284
>2gjj_A A21 single-chain antibody fragment against ERBB2; IG family, SCFV, immune system; 2.10A {Mus musculus} PDB: 3h3b_C
Probab=99.54 E-value=9.2e-14 Score=98.29 Aligned_cols=98 Identities=10% Similarity=0.039 Sum_probs=66.6
Q ss_pred eEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEEE-ec--c--eEE--cCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 15 ISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHILT-SG--V--LTY--TNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l~-~~--~--~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
..++.+|++|+|.|.+.+.+ .+.|.|||+.. ...+. .. . ..+ ..++||.+..+.....++|.|.+++.
T Consensus 147 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 226 (264)
T 2gjj_A 147 PEVVKTGASVKISCKASGYSFTGYFINWVKKNSGKSPEWIGHISSSYATSTYNQKFKNKAAFTVDTSSSTAFMQLNSLTS 226 (264)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTSCCEEEEEEETTTCCEEECGGGTTTEEEEEETTTTEEEEEECSCCG
T ss_pred CEEEcCCCcEEEEEEEeCCccCCeEEEEEEECCCCCcEEEEEEeccCcccccCcccCCceEEEEcCCCCEEEEEECcCCc
Confidence 35799999999999998765 37899999863 23332 11 0 011 12578888655556789999999999
Q ss_pred CCCEEEEEeecCC----C--CeeEEEEeceeccccc
Q psy14080 83 RDNGTYECQAQPY----T--TTSHSQNAPGLGDLLM 112 (113)
Q Consensus 83 ~D~G~Y~C~~~~~----~--~~s~~~~L~V~g~~~~ 112 (113)
+|+|+|+|.+... . .......|.|......
T Consensus 227 ~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~v~~~~~~ 262 (264)
T 2gjj_A 227 EDSADYYCVRSGNYEEYAMDYWGQGTSVTVSSHHHH 262 (264)
T ss_dssp GGCEEEEEEEECSGGGCSCCCBCCCEEEEEC-----
T ss_pred ccCEEEEEEEecCCCCcceEEECCCEEEEEeccccc
Confidence 9999999999652 2 1345667888766543
No 285
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.54 E-value=2.5e-13 Score=92.16 Aligned_cols=95 Identities=17% Similarity=0.173 Sum_probs=72.3
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC-C
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK-R 83 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~-~ 83 (113)
|+.+.. ...++++.+|++++|.|.+.+.+.+.|.|+|. +..+. ..+.|+.+... .++..+|.|.+++. +
T Consensus 6 pP~~~~-~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~--~~~~~------~~~~~~~~~~~-~~~~~~L~i~~v~~~~ 75 (212)
T 2yd1_A 6 PPEIIR-KPQNQGVRVGGVASFYCAARGDPPPSIVWRKN--GKKVS------GTQSRYTVLEQ-PGGISILRIEPVRAGR 75 (212)
T ss_dssp CCEEEE-CCCCEEEETTSCEEEEEEEECSSCCEEEEEET--TEECC------TTSTTEEEEEE-TTTEEEEEESSCCTTT
T ss_pred CCEEEc-CCCceEEecCCEEEEEEEEccCCCCeEEEEEC--CEECC------CCcceeEEEEc-CCCeEEEEEEecCCCC
Confidence 444444 45678999999999999999888889999984 22221 24678887642 34458999999999 9
Q ss_pred CCEEEEEeecC-CCC-eeEEEEeceecc
Q psy14080 84 DNGTYECQAQP-YTT-TSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~-~~~-~s~~~~L~V~g~ 109 (113)
|+|.|+|.+.. .+. .+..+.|.|...
T Consensus 76 d~G~Y~C~~~n~~g~~~~~~~~l~V~~~ 103 (212)
T 2yd1_A 76 DDAPYECVAENGVGDAVSADATLTIYEG 103 (212)
T ss_dssp TCSEEEEEEECSSSCEEEEEEEEEEECT
T ss_pred cCceEEEEEEeCCCCeEEeeEEEEEecc
Confidence 99999999954 455 677888888754
No 286
>1q0x_L FAB 9B1, light chain; anti-morphine antibody, FAB fragment, immune system; HET: PG4; 1.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 PDB: 1q0y_L* 1ngp_L* 1ngq_L 3ks0_L* 1gig_L 2vir_A 2vis_A* 2vit_A 1sm3_L 4a6y_L 1ind_L* 1ine_L* 1yuh_L* 2zpk_L 3rhw_K* 3ri5_K* 3ria_K* 3rif_K* 1mfe_L* 1mfb_L* ...
Probab=99.54 E-value=3.5e-14 Score=96.25 Aligned_cols=93 Identities=17% Similarity=0.053 Sum_probs=65.4
Q ss_pred cceEEEecCCcEEEEEEEccCC---CCEEEEEecCC-C--eEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV---KVRVSWVRRRD-W--HILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~---~~~V~W~k~~~-~--~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+.. . ..+....... ...+||.+.. ..+.++|+|.+++.+|
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D 84 (212)
T 1q0x_L 7 ESALTTSPGETVTLTCRSSTGAVTTSNYANWVQEKPDHLFTGLIGGTNNRAPGVPARFSGSL--IGDKAALTITGAQTED 84 (212)
T ss_dssp CSEEEECTTCCEEEEEEESSSCCCGGGCCEEEEEETTTEEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSCCGGG
T ss_pred CCeEeecCCCCEEEEEEecccccCCCCeEEEEEeCCCCCceEEEEcCcccCCcccccEEEEe--eCCEEEEEECCCCccC
Confidence 7788999999999999999876 47899999753 2 2222211111 1257998764 3467899999999999
Q ss_pred CEEEEEeecCCCC--eeEEEEecee
Q psy14080 85 NGTYECQAQPYTT--TSHSQNAPGL 107 (113)
Q Consensus 85 ~G~Y~C~~~~~~~--~s~~~~L~V~ 107 (113)
+|.|+|.+..... ....+.|.|.
T Consensus 85 ~G~Y~C~~~~~~~~~~~~~~~l~V~ 109 (212)
T 1q0x_L 85 EAIYFCALWSNNKLVFGGGTKLTVL 109 (212)
T ss_dssp CEEEEEEEECSSCEEECCCEEEEEC
T ss_pred CEEEEEEEecCchhhcCCCeEEEEe
Confidence 9999999965332 2233456553
No 287
>3tf7_C 42F3 MUT7 SCFV (42F3 alpha chain, linker, 42F3 BE; IG and MHC, antigen recognition, TCR-PMHC, membrane receptor system; 2.75A {Mus musculus}
Probab=99.54 E-value=8.6e-14 Score=97.59 Aligned_cols=101 Identities=9% Similarity=0.043 Sum_probs=68.0
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEEe--c-ce-EE-cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILTS--G-VL-TY-TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~~--~-~~-~~-~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
.++....+++.+|++|+|.|.+.+. .+.|.|||+... ..+.. + .. .. ...+||.+.. .....++|+|.++
T Consensus 140 v~~~p~~~~v~~G~~v~L~C~~~~~-~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~-~~~~~~~L~I~~v 217 (256)
T 3tf7_C 140 VTQSPRNKVTVTGENVTLSCRQTNS-HNYMYWYRQDTGHELRLIYYSYGAGNLQIGDVPDGYKATR-TTQEDFFLTLESA 217 (256)
T ss_dssp EEESCSEEEEETTCCEEECEEECSC-CSEEEEEEECTTSCEEEEEEEESTTCCEECSCCTTCEEEC-CSSSBCEEEESSC
T ss_pred EEecCCEEEEeCCCcEEEEEEcCCC-ceEEEEEEECCCCCeEEEEEEcCCCceecCccCCceEEEe-CCCCeEEEEECCC
Confidence 3445566788899999999999876 679999997632 22221 1 11 11 1257888764 2456789999999
Q ss_pred CCCCCEEEEEeec-CCCC--eeEEEEeceecccc
Q psy14080 81 QKRDNGTYECQAQ-PYTT--TSHSQNAPGLGDLL 111 (113)
Q Consensus 81 ~~~D~G~Y~C~~~-~~~~--~s~~~~L~V~g~~~ 111 (113)
+.+|+|.|+|++. ..+. .-....|.|+.+..
T Consensus 218 ~~~DsG~Y~C~a~n~~g~~~fG~gt~l~v~~~~~ 251 (256)
T 3tf7_C 218 SPSQTSLYFCASSDAPGQLYFGEGSKLTVLELEH 251 (256)
T ss_dssp CGGGCEEEEEEEEEETTEEEECCCEEEEEECGGG
T ss_pred CHHHCEEEEEEecCCCCccEECCCeEEEEEcccc
Confidence 9999999999994 3221 22344566665443
No 288
>3tv3_L PGT128 light chain, IG lambda-2 chain C regions; FAB, HIV-1 neutralizing antibody, GP120, immune system; HET: PCA MAN GOL EPE; 1.29A {Homo sapiens} PDB: 3tyg_L* 3twc_L* 3tnm_L 2mcg_1 1mcw_M 1a8j_L 3mcg_1 1dcl_A 1mcb_A* 1mcc_A* 1mcd_A* 1mce_A* 1mcf_A* 1mch_A 1mci_A* 1mcj_A* 1mck_A 1mcl_A* 1mcn_A* 1mcq_A ...
Probab=99.54 E-value=3.4e-14 Score=96.24 Aligned_cols=90 Identities=17% Similarity=0.082 Sum_probs=65.5
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEe-cceE-EcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTS-GVLT-YTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~-~~~~-~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
.+++.+|++|+|+|.+. +.+.|.|||+.. ...+.. .... ....+||.+.. ..++++|.|.+++.+|+|.|+
T Consensus 9 ~~~v~~G~~v~L~C~~~--~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~Y~ 84 (211)
T 3tv3_L 9 SASGSPGQSITISCTGT--SNNFVSWYQQHAGKAPKLVIYDVNKRPSGVPDRFSGSK--SGNTASLTVSGLQTDDEAVYY 84 (211)
T ss_dssp EEEECTTCEEEEEEECC--CSSCEEEEEECTTSCCEEEEBTTTBCCTTSCTTEEEEE--ETTEEEEEEESCCGGGCEEEE
T ss_pred eEEEcCCCCEEEEEEEC--CCCeEEEEEECCCCCCEEEEEEecccCCCCcCcEEEEc--cCCEEEEEECCCChhHCEEEE
Confidence 78899999999999999 778999999742 233322 1111 11357998764 456889999999999999999
Q ss_pred EeecCC-C--CeeEEEEeceec
Q psy14080 90 CQAQPY-T--TTSHSQNAPGLG 108 (113)
Q Consensus 90 C~~~~~-~--~~s~~~~L~V~g 108 (113)
|.+... + ..+..+.|.|.+
T Consensus 85 C~~~~~~~~~~~~~~~~l~V~~ 106 (211)
T 3tv3_L 85 CGSLVGNWDVIFGGGTKLTVLG 106 (211)
T ss_dssp EEEEETTTEEEECCCEEEEECC
T ss_pred EEEecCCCceeECCCceEEEeC
Confidence 999543 3 344556777763
No 289
>1zvo_C Myeloma immunoglobulin D delta; immunoglobulin fold, antibody, immune system; NMR {Homo sapiens}
Probab=99.53 E-value=4.8e-14 Score=108.26 Aligned_cols=84 Identities=11% Similarity=0.061 Sum_probs=61.9
Q ss_pred ecceEEEecCCcEEEEEEEccCC--C--CEEEEEecCCC---eE-EEecc---eEE--cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIV--K--VRVSWVRRRDW---HI-LTSGV---LTY--TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~--~--~~V~W~k~~~~---~~-l~~~~---~~~--~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
....+++.+|++|+|+|.+.+.+ . ..|.|||+..+ .. ++... ... ..++||.+..+..+++++|+|+
T Consensus 6 qp~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~rq~~g~~~~~l~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~sL~I~ 85 (512)
T 1zvo_C 6 ESGPGLVKPSETLSLTCIVSGGPIRRTGYYWGWIRQPPGKGLEWIGGVYYTGSIYYNPSLRGRVTISVDTSRNQFSLNLR 85 (512)
T ss_pred CCCCEEEcCCCCEEEEEEEcccccCCCCeeEEEEEeCCCCCcEEEEEEecCCCEEECCccCCceEEEecCCCCEEEEEEC
Confidence 35678999999999999998643 2 68999998632 22 22211 111 1257999886555668999999
Q ss_pred cCCCCCCEEEEEeecCC
Q psy14080 79 FLQKRDNGTYECQAQPY 95 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~ 95 (113)
+++.+|+|+|+|++...
T Consensus 86 ~v~~~Dsg~Y~C~~~~~ 102 (512)
T 1zvo_C 86 SMSAADTAMYYCARGNP 102 (512)
T ss_pred cCCHHHCEEEEEEEECC
Confidence 99999999999999653
No 290
>3b5h_A Cervical EMMPRIN, HAB18G/CD147; IG-like domain, cell invasion; 2.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.53 E-value=7.7e-14 Score=92.51 Aligned_cols=88 Identities=15% Similarity=0.138 Sum_probs=68.2
Q ss_pred ceEEEecCCcEEEEEEEccCC-CCEEEEEecCC--CeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCC-CCCCEEEE
Q psy14080 14 QISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRD--WHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQ-KRDNGTYE 89 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~--~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~ 89 (113)
....+.+|+++.|.|.+.+.+ .+.+.|+|..+ ..++.. ..++||.+.. +.+..+|.|.+++ .+|+|.|.
T Consensus 91 ~~~~~~~g~~~~l~C~~~g~p~~~~i~W~~~~~~~~~~~~~-----~~~~~~~~~~--~~~~~~L~i~~v~~~~d~G~Y~ 163 (184)
T 3b5h_A 91 SSEHINEGETAMLVCKSESVPPVTDWAWYKITDSEDKALMN-----GSESRFFVSS--SQGRSELHIENLNMEADPGQYR 163 (184)
T ss_dssp SEEEECTTSCEEEEEECCCSSCCCEEEEEECCSSSCEECCT-----TGGGTEEEEE--ETTEEEEEECSCCTTTSSEEEE
T ss_pred CCcEEcCCCcEEEEEEECCCCCCCeEEEEEcCCCCCEEeec-----CCCCEEEEEe--cCCeeEEEEeeccccccCceEE
Confidence 566889999999999999888 78999999532 222211 1247888864 3456799999999 99999999
Q ss_pred Eee-cCCCCeeEEEEeceec
Q psy14080 90 CQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 90 C~~-~~~~~~s~~~~L~V~g 108 (113)
|.+ +..+..+..+.|.|++
T Consensus 164 C~a~N~~g~~~~~~~l~V~~ 183 (184)
T 3b5h_A 164 CNGTSSKGSDQAIITLRVRS 183 (184)
T ss_dssp EEEEETTEEEEEEEEEEEC-
T ss_pred EEEEeCCCcceEEEEEEEec
Confidence 999 5667777889999876
No 291
>1f3r_B FV antibody fragment; IG-fold, immuno complex, antibody-antigen, beta-turn, immune system; HET: NLE; NMR {Rattus norvegicus} SCOP: b.1.1.1 b.1.1.1
Probab=99.53 E-value=5.8e-15 Score=103.64 Aligned_cols=100 Identities=15% Similarity=0.062 Sum_probs=70.5
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEEe-cceE-EcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILTS-GVLT-YTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~~-~~~~-~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
.+....+++.+|++++|.|.+.+.+.+.|.|||+.++ ..+.. .... .....||.+.. +...++|+|.+++.+|
T Consensus 143 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D 220 (257)
T 1f3r_B 143 TQSPSLLSASVGDRVTLSCKGSQNINNYLAWYQQKLGEAPKLLIYNTNSLQTGIPSRFSGSG--SGTDYTLTISSLQPED 220 (257)
T ss_dssp CEETSEECCCTTCCEEEEEECSSCCBTCEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--EBTEEEEEECSCCGGG
T ss_pred EccCCEEEEcCCCCEEEEEEECCcCCCcEEEEEECCCCCcEEEEEEccCCCCCcCCCEEEec--CCCEEEEEECCCChhh
Confidence 3445567899999999999999887789999997532 22222 1111 11257998753 3457899999999999
Q ss_pred CEEEEEeecCCC-CeeEEEEeceecccc
Q psy14080 85 NGTYECQAQPYT-TTSHSQNAPGLGDLL 111 (113)
Q Consensus 85 ~G~Y~C~~~~~~-~~s~~~~L~V~g~~~ 111 (113)
+|.|+|.+.... .......|.|++...
T Consensus 221 ~G~Y~C~a~n~~~~~g~gt~l~V~~~~~ 248 (257)
T 1f3r_B 221 VATYFCYQYNNGYTFGAGTKLELKAAEQ 248 (257)
T ss_dssp CSEEEEEEESSSEEECCCCEECCSSSCC
T ss_pred CEEEEEEEeCCCCeECCCEEEEEeCCCc
Confidence 999999996533 233456788877543
No 292
>2edo_A CD48 antigen; beta-sandwich, IG-fold, B-lymphocyte activation marker blast-1, BCM1 surface antigen, leukocyte antigen MEM-102, TCT.1; NMR {Homo sapiens}
Probab=99.53 E-value=2.6e-15 Score=95.82 Aligned_cols=92 Identities=17% Similarity=0.079 Sum_probs=63.0
Q ss_pred eEEEecCCcEEEEEEEc-cCCCCEEEEEecCCCeEEEec--ceEEc---CCCCEEEEEeCCCCcEEEEEccCCCCCCEEE
Q psy14080 15 ISTGFLAVFSYSDKTVR-DIVKVRVSWVRRRDWHILTSG--VLTYT---NDARFQVIHTDGSDDWNLQIKFLQKRDNGTY 88 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~-~~~~~~V~W~k~~~~~~l~~~--~~~~~---~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (113)
.+.+.+|++|+|+|..+ ......|.|||+....+.... ..... -.+|+.+. ..+.+|+|+|++.+|+|.|
T Consensus 13 pv~~~~G~~VtL~c~~~~~~~~~~i~W~~~~~~~i~~~~~~~~~~~~~~f~~R~~l~----~~~~sL~I~nv~~~DsG~Y 88 (121)
T 2edo_A 13 HMTVVSGSNVTLNISESLPENYKQLTWFYTFDQKIVEWDSRKSKYFESKFKGRVRLD----PQSGALYISKVQKEDNSTY 88 (121)
T ss_dssp CCEEETTSCEEECCSSCCCSSEEEEEEEEETTEEEEEECSSCEEECSCTTTTTCEEC----TTTCCEEESSCCGGGCSEE
T ss_pred EEEEEeCCCEEEeCCCCCCCceeEEEEEcCCCCeEEEEECcCCeEeChhcCCcEEEe----CCCceEEEeCCCHHHCeEE
Confidence 37899999999999874 333468999998652333221 11111 12466553 2466999999999999999
Q ss_pred EEeecCCC--CeeEEEEeceeccc
Q psy14080 89 ECQAQPYT--TTSHSQNAPGLGDL 110 (113)
Q Consensus 89 ~C~~~~~~--~~s~~~~L~V~g~~ 110 (113)
+|.+.... ..+..++|.|.+.+
T Consensus 89 ~c~v~~~~~~~~~~~~~L~V~~~~ 112 (121)
T 2edo_A 89 IMRVLKKTGNEQEWKIKLQVLDPV 112 (121)
T ss_dssp EEEEEETTTEEEECCEECEEECCS
T ss_pred EEEEEcCCCcEEEEEEEEEEECCC
Confidence 99996332 35667888887654
No 293
>3auv_A SC-DSFV derived from the G6-FAB; SC-DSFV (disulfide-stabilized SCFV), SCFV, monovalent antibo antibody engineering, immune system; 2.40A {Homo sapiens} PDB: 2kh2_B 3iy0_L
Probab=99.53 E-value=8.6e-14 Score=98.66 Aligned_cols=97 Identities=12% Similarity=0.109 Sum_probs=67.4
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEEE-ecc----eEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHILT-SGV----LTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l~-~~~----~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++++|.|.+.+.+ .+.|.|||+.. ...+. ... ... ..++||.+..+...+.++|.|.++
T Consensus 141 p~~~~v~~G~~v~L~C~~~g~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 220 (276)
T 3auv_A 141 SGGGLVQPGGSLRLSCAASGFTISDYWIHWVRQAPGKCLEWVAGITPAGGYTYYADSVKGRFTISADTSKNTAYLQMNSL 220 (276)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSEEEEEEECTTCCEEEEEEECGGGCCEEECTTTTTTEEEEEEGGGTEEEEEECSC
T ss_pred CCceEecCCCeEEEEEEecCccCCCCEEEEEEcCCCCCcEEEEEEeccCCccccccccCCcEEEEecCCCcEEEEEECCC
Confidence 4567899999999999998765 58999999852 12221 111 011 135799987544456789999999
Q ss_pred CCCCCEEEEEeecCC----C--CeeEEEEeceecc
Q psy14080 81 QKRDNGTYECQAQPY----T--TTSHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~----~--~~s~~~~L~V~g~ 109 (113)
+.+|+|.|+|.+... . .......|.|++.
T Consensus 221 ~~~DsG~Y~C~a~n~~~~~~~~~fg~gt~l~V~~~ 255 (276)
T 3auv_A 221 RAEDTAVYYCARFVFFLPYAMDYWGQGTLVTVSSA 255 (276)
T ss_dssp CGGGCEEEEEEEECSSTTCSCCCBCCCEEEEEC--
T ss_pred ChhHCEEEEEEEEcCcCCcCceEECCCEEEEEccc
Confidence 999999999999543 2 2334567777654
No 294
>3so5_A LIG-3, leucine-rich repeats and immunoglobulin-like DOMA protein 3; structural genomics, joint center for struct genomics, JCSG; HET: MLY MSE; 1.70A {Mus musculus}
Probab=99.52 E-value=1.5e-13 Score=84.13 Aligned_cols=98 Identities=11% Similarity=0.109 Sum_probs=60.8
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccC--CCCEEEEEecCCCeEEEecceEEcCCCCEEEEE-eCCCCcEEEEEccCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDI--VKVRVSWVRRRDWHILTSGVLTYTNDARFQVIH-TDGSDDWNLQIKFLQ 81 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~--~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~-~~~~~~~~L~I~~v~ 81 (113)
|+..+.....+.++.+|++++|.|.+.+. +.+.+.|+|.. ..+..... ....|+.... .......+|.|.+++
T Consensus 9 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~i~W~k~~--~~~~~~~~--~~~~~~~~~~~~~~~~~~~L~I~~v~ 84 (112)
T 3so5_A 9 PXPQITVQPETQSAIXGSDVSFTCSAASSSDSPMTFAWXXDN--EALQDAEM--ENYAHLRAQGGELMEYTTILRLRNVE 84 (112)
T ss_dssp CSCEEEECCCCEEECTTCCEEEEEEEEESCCCCCEEEEEETT--EECTTCEE--EEEEETTGGGSSCEEEEEEEEECSCC
T ss_pred CCCeEEeCCCCcEEECCCCEEEEEEEecCCCCCEEEEEccCC--cccccccc--cceeeeeccCCCccccceEEEEeccc
Confidence 33444445667799999999999999854 35799999853 22211000 0000111000 000024699999999
Q ss_pred CCCCEEEEEeec-CCCC-eeEEEEece
Q psy14080 82 KRDNGTYECQAQ-PYTT-TSHSQNAPG 106 (113)
Q Consensus 82 ~~D~G~Y~C~~~-~~~~-~s~~~~L~V 106 (113)
.+|+|.|+|.+. ..+. .+..+.|.|
T Consensus 85 ~~D~G~Y~C~a~n~~g~~~s~~~~l~V 111 (112)
T 3so5_A 85 FTSEGXYQCVISNHFGSSYSVXAXLTI 111 (112)
T ss_dssp GGGCEEEEEEEEETTEEEECCCEEEEE
T ss_pred cccCCeEEEEEEeCCCcEEEeEEEEEe
Confidence 999999999995 4444 456677766
No 295
>1nqb_A Single-chain antibody fragment; multivalent antibody, diabody, domain SWA immunoglobulin; 2.00A {Mus musculus} SCOP: b.1.1.1 b.1.1.1 PDB: 1lmk_A 1qnz_H
Probab=99.52 E-value=5.6e-14 Score=98.90 Aligned_cols=97 Identities=13% Similarity=0.046 Sum_probs=66.9
Q ss_pred eecceEEEecCCcEEEEEEEccCCCC-----EEEEEecCCC---eEEEe-cceE-EcCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVKV-----RVSWVRRRDW---HILTS-GVLT-YTNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~~-----~V~W~k~~~~---~~l~~-~~~~-~~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
.....+++.+|++++|.|.+.+.+.+ .|.|||+.++ ..+.. .... ....+||.+.. ....++|.|.++
T Consensus 126 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v 203 (256)
T 1nqb_A 126 QTPLSLPVSLGDQASISCRSSQSIVHSNGNTYLEWYLQKPGQSPKLLIYKVSNRFSGVPDRFSGSG--SGTDFTLKISRV 203 (256)
T ss_dssp EECSEEEECTTCCEEEEEEESSCCBCTTSCBCEEEEEECTTSCEEEEEETTTEECTTCCTTEEEEE--ETTEEEEEESSC
T ss_pred ecCcEEEEecCCcEEEEeEecCcccccccceEEEEEEECCCCCcEEEEEEeCCCCCccCCcEEEEc--cCCEEEEEECCC
Confidence 44566789999999999999987654 8999997532 22221 1111 11257998753 346789999999
Q ss_pred CCCCCEEEEEeecCCC--CeeEEEEeceecc
Q psy14080 81 QKRDNGTYECQAQPYT--TTSHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~--~~s~~~~L~V~g~ 109 (113)
+.+|+|.|+|.+.... .......|.|.+.
T Consensus 204 ~~~DsG~Y~C~a~~~~~~~fg~gt~l~V~~~ 234 (256)
T 1nqb_A 204 EAEDLGVYYCFQGSHVPYTFGGGTKLEIKRA 234 (256)
T ss_dssp CGGGCEEEEEEECSSSSCEECCCEEEEECC-
T ss_pred ChHHCEEEEEEEccCCceEECCCEEEEEECC
Confidence 9999999999996532 2344556777643
No 296
>3omz_A Human vdelta1 gamma delta T cell receptor delta1A; immunoglobulin fold, immune surveillance of cell stress PROT A/B, MIC-A/B binding, epithelium; 3.04A {Homo sapiens}
Probab=99.52 E-value=2.9e-14 Score=99.92 Aligned_cols=103 Identities=13% Similarity=0.041 Sum_probs=69.0
Q ss_pred eEeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCCC---eEEEecce--EEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDW---HILTSGVL--TYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~---~~l~~~~~--~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
..+....+++.+|++|+|.|.+.+. +.+.|.|||+... ..+..... ....++||.+..+...+.++|+|.+++.
T Consensus 139 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 218 (259)
T 3omz_A 139 VTQAQSSVSMPVRKAVTLNCLYETSWWSYYIFWYKRLPSKEMIFLIRQGSDEQNAKSGRYSVNFKKAAKSVALTISALQL 218 (259)
T ss_dssp EECCCCCEEEETTCCEEECCEEECCCSSCEEEEEEECTTCCEEEEEEEETTSCCCEETTEEECCBGGGTBCCEEESSCCG
T ss_pred eEEeCCEEEEcCCCCEEEEEECCCccCCceEEEeeeCCCCCcEEEEEECCcCCcccCCeEEEEEcCcCCEEEEEECCCCh
Confidence 3445566889999999999998864 6789999998632 22211110 0112479987644445678999999999
Q ss_pred CCCEEEEEeecCC----C--CeeEEEEeceecccc
Q psy14080 83 RDNGTYECQAQPY----T--TTSHSQNAPGLGDLL 111 (113)
Q Consensus 83 ~D~G~Y~C~~~~~----~--~~s~~~~L~V~g~~~ 111 (113)
+|+|.|+|+++.. . ..-....|.|++...
T Consensus 219 ~DsG~Y~C~~~~~~~~~~~~~fg~GT~l~v~~~~~ 253 (259)
T 3omz_A 219 EDSAKYFCALGESLTRADKLIFGKGTRVTVEPRSQ 253 (259)
T ss_dssp GGCSEEEEEEESCSSTTCCCEECCCEEEEEEC---
T ss_pred hHCEEEEEEEeCccCCCCceEECCCCEEEEeeCcc
Confidence 9999999999631 1 223455777776543
No 297
>2v9t_A Roundabout homolog 1; structural protein-receptor complex, developmental protein, domain, roundabout, chemotaxis, LRR domain; 1.70A {Homo sapiens}
Probab=99.52 E-value=2.6e-14 Score=89.47 Aligned_cols=101 Identities=14% Similarity=0.127 Sum_probs=62.4
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCC--CEEEEEeCCCCcEEEEE--cc
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDA--RFQVIHTDGSDDWNLQI--KF 79 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~--R~~~~~~~~~~~~~L~I--~~ 79 (113)
.|+.+.. ...++++.+|++++|.|.+.+.+.+.|.|||.. ..+..+. .+. ++... .++....|.| .+
T Consensus 8 ~pP~i~~-~p~~~~v~~G~~v~L~C~~~g~P~p~v~W~k~~--~~~~~~~----~~~~~~~~~~--~~~~~~~~~i~~~~ 78 (117)
T 2v9t_A 8 FPPRIVE-HPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGG--ERVETDK----DDPRSHRMLL--PSGSLFFLRIVHGR 78 (117)
T ss_dssp EEEEEEE-CCCCEEECTTCCEEECCEEEEESCCEEEEEETT--EECCCTT----TCSSCSEEEC--TTSCEEESSCCCBT
T ss_pred CCCeeEc-CCCCEEEcCCCcEEEEEECCccCCCeEEEEECC--EeccccC----CCCcceeEEe--cCCcEEEEEEEeCC
Confidence 3555554 356788999999999999999999999999953 2222110 111 22222 2223333333 37
Q ss_pred CCCCCCEEEEEeec-CCCC-eeEEEEeceecccccC
Q psy14080 80 LQKRDNGTYECQAQ-PYTT-TSHSQNAPGLGDLLMH 113 (113)
Q Consensus 80 v~~~D~G~Y~C~~~-~~~~-~s~~~~L~V~g~~~~~ 113 (113)
++.+|+|.|+|.+. ..+. .+..+.|.|...-.||
T Consensus 79 v~~~D~G~Y~C~a~N~~G~~~s~~~~l~~~~~~~~~ 114 (117)
T 2v9t_A 79 KSRPDEGVYVCVARNYLGEAVSHDASLEVAAAAHHH 114 (117)
T ss_dssp TBCSSCEEEEEEEEETTEEEECCCEEEEEC------
T ss_pred CCcCcCEEEEEEEEeCccceEeeeEEEEhhhhhhhh
Confidence 78999999999994 4443 4577888887776665
No 298
>1oga_E TRBC1, T-cell receptor beta chain C region; immune system/receptor, immune system/receptor/complex, TCR, MHC, immunodominance, FLU, complex; 1.40A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 PDB: 2vlm_E 2vlk_E 2vlj_E 2vlr_E 2xna_B 2xn9_B 2axh_A 2axj_A 3scm_D* 3sda_D* 3sdc_D* 3sdd_D* 3qi9_D* 3mff_B* 2ak4_E 3he7_D* 2eyr_B 3pqy_E 3kxf_E 2cde_B ...
Probab=99.52 E-value=8e-14 Score=97.67 Aligned_cols=98 Identities=9% Similarity=-0.008 Sum_probs=67.1
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEEecc---eEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILTSGV---LTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~~~~---~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
.++....+++.+|++|+|+|.+.. +.+.|.|||+... ..+.... ... ...+||.+..+ +.++++|+|+++
T Consensus 6 v~q~p~~v~v~~G~~v~L~C~~~~-~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~~~~R~~~~~~-~~~~~~L~I~~v 83 (252)
T 1oga_E 6 ITQSPKYLFRKEGQNVTLSCEQNL-NHDAMYWYRQDPGQGLRLIYYSQIVNDFQKGDIAEGYSVSRE-KKESFPLTVTSA 83 (252)
T ss_dssp EECSCSEEEEETTCCEEECCEECS-CCSEEEEEEECTTCCEEEEEEESSTTCCEECSSCTTEEECCS-STTBCCEEECSC
T ss_pred ceEcCCeEEEcCCCcEEEEEEeCC-CCCEEEEEEECCCCCeEEEEEEccCccccCCccCCcEEEEec-CCCEEEEEECcC
Confidence 345567789999999999999963 5689999998632 2232211 011 12579988642 356789999999
Q ss_pred CCCCCEEEEEeecCC----CCeeEEEEeceec
Q psy14080 81 QKRDNGTYECQAQPY----TTTSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~----~~~s~~~~L~V~g 108 (113)
+.+|+|.|+|.+... ........|.|.+
T Consensus 84 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 115 (252)
T 1oga_E 84 QKNPTAFYLCASSSRSSYEQYFGPGTRLTVTE 115 (252)
T ss_dssp CSCCCEEEEEEEESSTTSCCEECCCEEEEEES
T ss_pred ChhhCEEEEEEEecCCccceeECCCEEEEEec
Confidence 999999999999653 1112334566654
No 299
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.52 E-value=3.8e-14 Score=95.13 Aligned_cols=97 Identities=20% Similarity=0.184 Sum_probs=69.4
Q ss_pred cceEEEecCCcEEEEEEEccCC----CCEEEEEecCCC------eEE-EecceEEcC-----CCCEEEEE-eCCCCcEEE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV----KVRVSWVRRRDW------HIL-TSGVLTYTN-----DARFQVIH-TDGSDDWNL 75 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~----~~~V~W~k~~~~------~~l-~~~~~~~~~-----~~R~~~~~-~~~~~~~~L 75 (113)
.+.+.+.+|++++|+|.+.+.+ .+.|.|+|.... .++ +.+...... .+|+.+.. +...++++|
T Consensus 7 ~~~v~v~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L 86 (214)
T 3jz7_A 7 EQRIEKAKGETAYLPCKFTLSPEDQGPLDIEWLISPSDNQIVDQVIILYSGDKIYDNYYPDLKGRVHFTSNDVKSGDASI 86 (214)
T ss_dssp EEEEEEETTSCEEECCBCCCCTTCCSCCEEEEEEEESSSSCCSEEEEEEETTEEECCCCGGGTTTEEESCSCGGGTBCCE
T ss_pred CceEEEecCCCEEEEEEEecCCCCCCcEEEEEEecCCCCCCCceEEEEEeCCeEccccCCccccceEEeccCccCCcccE
Confidence 3567899999999999998765 469999996521 222 223333321 56777642 123457899
Q ss_pred EEccCCCCCCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 76 QIKFLQKRDNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
.|.+++.+|+|.|+|.+. ..+..+..+.|.|...
T Consensus 87 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~~ 121 (214)
T 3jz7_A 87 NVTNLQLSDIGTYQCKVKKAPGVANKKFLLTVLVK 121 (214)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEECC
T ss_pred EEccCChhhCeEEEEEEEeCCCccccEEEEEEEcC
Confidence 999999999999999995 4455677888888754
No 300
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.52 E-value=1.9e-13 Score=95.93 Aligned_cols=92 Identities=13% Similarity=0.126 Sum_probs=70.1
Q ss_pred ceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 6 GGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 6 ~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
+..+.....++.+.+|++++|.|.+.+.+.+.|.|+|.. ..+ ....|+.+.. ..+..+|.|.+++.+|+
T Consensus 5 pP~~~~~p~~~~~~~G~~v~l~C~~~g~p~~~v~W~~~~--~~~-------~~~~~~~~~~--~~~~~~L~i~~v~~~d~ 73 (284)
T 2rik_A 5 PPFFDLKPVSVDLALGESGTFKCHVTGTAPIKITWAKDN--REI-------RPGGNYKMTL--VENTATLTVLKVTKGDA 73 (284)
T ss_dssp CCEEEECCCCEEEETTCCEEEEEEEESSSCCEEEEEETT--EEC-------CSSSSEEEEE--ETTEEEEEESSCCGGGC
T ss_pred CCEEEccccceEecCCCcEEEEEEEEcCCCCEEEEEECC--EEC-------cCCCcEEEEE--cCCEEEEEEecCCcccC
Confidence 334455567789999999999999998888899999843 222 2355666543 23568999999999999
Q ss_pred EEEEEeec-CCCCeeEEEEeceec
Q psy14080 86 GTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 86 G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
|.|.|.+. ..+..+..+.|.|..
T Consensus 74 G~Y~C~~~n~~g~~~~~~~l~V~~ 97 (284)
T 2rik_A 74 GQYTCYASNVAGKDSCSAQLGVQE 97 (284)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEECCceEEEEEEEEccC
Confidence 99999995 445667778888765
No 301
>3oai_A Maltose-binding periplasmic protein, myelin prote; schwann cell membrane protein, immunoglobulin-folding, inter adhesion, tetramer; HET: MAL; 2.10A {Escherichia coli}
Probab=99.52 E-value=7.1e-14 Score=106.17 Aligned_cols=98 Identities=14% Similarity=0.132 Sum_probs=66.9
Q ss_pred EeecceEEEecCCcEEEEEEEccC----CCCEEEEEecCCC-----eEEEe-cceEEc-----CCCCEEEEEeCCCCcEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDI----VKVRVSWVRRRDW-----HILTS-GVLTYT-----NDARFQVIHTDGSDDWN 74 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~----~~~~V~W~k~~~~-----~~l~~-~~~~~~-----~~~R~~~~~~~~~~~~~ 74 (113)
......+++.+|++|+|+|.++.. ....|.|||+.++ .++.. +..... -.+|+.+..+...++++
T Consensus 389 v~~~~~v~~~~G~~v~L~C~~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~s 468 (507)
T 3oai_A 389 VYTDREVHGAVGSQVTLHCSFWSSEWVSDDISFTWRYQPEGGRDAISIFHYAKGQPYIDEVGTFKERIQWVGDPRWKDGS 468 (507)
T ss_dssp EECCSEEEEETTCCEEECCEECCSSCCCSSCEEEEEEEETTCSCCEEEEEEETTEEEECTTCTTTTTEEECCBGGGTBCC
T ss_pred EecCceEEEecCCcEEEeeEecCCCCCCCceEEEEEEcCCCCCceEEEEEecCCcccCCCCccccceEEEecCCCCCcee
Confidence 344567899999999999999532 2357999998632 12222 222221 14688877554567889
Q ss_pred EEEccCCCCCCEEEEEeecCCCC-ee--EEEEecee
Q psy14080 75 LQIKFLQKRDNGTYECQAQPYTT-TS--HSQNAPGL 107 (113)
Q Consensus 75 L~I~~v~~~D~G~Y~C~~~~~~~-~s--~~~~L~V~ 107 (113)
|+|++++.+|+|+|+|.+...+. .. ..+.|.|.
T Consensus 469 L~I~~v~~~D~g~Y~C~v~~~~~~~~~~~~l~l~V~ 504 (507)
T 3oai_A 469 IVIHNLDYSDNGTFTCDVKNPPDIVGKTSQVTLYVF 504 (507)
T ss_dssp EEECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEEE
T ss_pred EEECCCCcccCeEEEEEEEcCCCcCCceeEEEEEEe
Confidence 99999999999999999976543 23 33455544
No 302
>2gki_A Nuclease; anti-DNA antibody, catalytic antibody, immune system; 2.88A {Mus musculus}
Probab=99.51 E-value=1.2e-13 Score=99.00 Aligned_cols=99 Identities=13% Similarity=0.068 Sum_probs=68.6
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCC------EEEEEecCC---CeEEEe-cceEE-cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKV------RVSWVRRRD---WHILTS-GVLTY-TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~------~V~W~k~~~---~~~l~~-~~~~~-~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
.+....+++.+|++++|.|.+.+.+.+ .|.|||+.. ...+.. ..... ..++||.+.. +...++|+|.
T Consensus 163 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~~~v~W~k~~~g~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~ 240 (291)
T 2gki_A 163 SQSPSSLAVSAGEKVTMSCKSSQSLFNSRTRKNYLAWYQQKPGQSPKLLIYWASTRESGVPDRFTGSG--SGTDFTLTIS 240 (291)
T ss_dssp ECSCSEEEEETTSCEEEEEEESSCCEETTTTEECEEEEEECTTSCCEEEEETTTEECTTCCTTEEEEE--ETTEEEEEES
T ss_pred EcCCCEEEEcCCCcEEEEEEcCCccccccccceeEEEEEECCCCCcEEEEEEcccCCCCcCCCEEEEe--cCCEEEEEEC
Confidence 344557889999999999999877654 899999853 223322 11111 1267998753 3467899999
Q ss_pred cCCCCCCEEEEEeecCCC--CeeEEEEeceeccc
Q psy14080 79 FLQKRDNGTYECQAQPYT--TTSHSQNAPGLGDL 110 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~~~--~~s~~~~L~V~g~~ 110 (113)
+++.+|+|.|+|.+.... .......|.|++..
T Consensus 241 ~v~~~DsG~Y~C~a~~~~~~~fg~gt~l~v~~~~ 274 (291)
T 2gki_A 241 SVQAEDLAVYYCKQSYYHMYTFGSGTKLEIKHHH 274 (291)
T ss_dssp SCCGGGCEEEEEEEEETTEEEECCCEEEEEECC-
T ss_pred CCCHHHCEEEEEEEccCCceEEcCCEEEEEEeeE
Confidence 999999999999996432 22345567777653
No 303
>3sbw_C Programmed cell death 1 ligand 1; PD-1, PD-L1, B7-H1, programmed death-1 ligand 1, complex, costimulatory, immune system; 2.28A {Homo sapiens} PDB: 3fn3_A 3bis_A 3bik_A
Probab=99.51 E-value=1.4e-13 Score=93.44 Aligned_cols=95 Identities=12% Similarity=0.011 Sum_probs=66.7
Q ss_pred ceEEEecCCcEEEEEEEccCC-----CCEEEEEecCCCeEEEe-cceEE------cCCCCEEEEEe-CCCCcEEEEEccC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIV-----KVRVSWVRRRDWHILTS-GVLTY------TNDARFQVIHT-DGSDDWNLQIKFL 80 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~-----~~~V~W~k~~~~~~l~~-~~~~~------~~~~R~~~~~~-~~~~~~~L~I~~v 80 (113)
..+.+.+|++++|+|.+.+.+ ...|.|+|.. ..+... +.... ...+|+.+..+ ...++++|.|.++
T Consensus 9 ~~v~~~~G~~v~L~C~~~~~p~~~~~~~~v~W~~~~-~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v 87 (222)
T 3sbw_C 9 DLYVVEYGSNMTIECKFPVEKQLDLAALIVYWEMED-KNIIQFVHGEEDLKVQHSSYRQRARLLKDQLSLGNAALQITDV 87 (222)
T ss_dssp SEEEEETTSCEEEEEECCCCSSCCTTTCEEEEEETT-EEEEEEETTEECSSSSCGGGSSSEEECHHHHTTTEEEEEESSC
T ss_pred ccEEEEcCCcEEEEeEecCCCCCCCccEEEEEEECC-cEEEEEeCCccccccccccccCceEEccccccCCEEEEEEcCc
Confidence 457889999999999987554 3489999965 222221 11111 11367776422 1345789999999
Q ss_pred CCCCCEEEEEeecCCCCeeEEEEeceecc
Q psy14080 81 QKRDNGTYECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~~~s~~~~L~V~g~ 109 (113)
+.+|+|.|+|.+...+..+..+.|.|...
T Consensus 88 ~~~D~G~Y~C~~~~~~~~~~~~~l~V~~~ 116 (222)
T 3sbw_C 88 KLQDAGVYRCMISYGGADYKRITVKVNAP 116 (222)
T ss_dssp CGGGCEEEEEEEESSSEEEEEEEEEEEBC
T ss_pred ccccCeEEEEEEEeCCCceeEEEEEEECC
Confidence 99999999999976666677888888753
No 304
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.51 E-value=3.5e-13 Score=91.56 Aligned_cols=95 Identities=22% Similarity=0.267 Sum_probs=69.8
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCC-C
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQ-K 82 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~ 82 (113)
.|+.+. ....++++.+|+++.|.|.+.+.+.+.|.|+|.. ..+ .+.|+......+....+|.|.+++ .
T Consensus 5 ~~P~~~-~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~~--~~~--------~~~~~~~~~~~~~~~~~L~i~~v~~~ 73 (212)
T 2yd6_A 5 TPPRFT-RTPVDQTGVSGGVASFICQATGDPRPKIVWNKKG--KKV--------SNQRFEVIEFDDGSGSVLRIQPLRTP 73 (212)
T ss_dssp EEEEEE-ECCCCEEEETTSCEEEEEEEEEESCCEEEEEETT--EEC--------CCTTEEEEEEGGGTEEEEEECSCCTT
T ss_pred CCCeEE-eCcceeEEecCCeEEEEEEEeeCCCCEEEEEECC--cCC--------CCCceeEEEEcCCCceEEEEeccCCC
Confidence 345554 3456689999999999999998888899999843 222 234555433233456789999995 9
Q ss_pred CCCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 83 RDNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 83 ~D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
+|+|.|+|.+. ..+..+..+.|.|...
T Consensus 74 ~d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (212)
T 2yd6_A 74 RDEAIYECVASNNVGEISVSTRLTVLRE 101 (212)
T ss_dssp TTCEEEEEEEEETTEEEEEEEEEEEECG
T ss_pred CCCeEEEEEEEcCCCcEEEEEEEEEecc
Confidence 99999999995 4456677888888764
No 305
>1hzh_H IGG, immunoglobulin heavy chain; antibody, immune system; HET: NAG BMA MAN GAL FUC; 2.70A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2 PDB: 2ig2_H 1mco_H*
Probab=99.51 E-value=1.1e-13 Score=103.95 Aligned_cols=83 Identities=10% Similarity=0.101 Sum_probs=61.7
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Ee---cc-eEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TS---GV-LTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~---~~-~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ .. +. ... ..++||.+..+...+.++|+|.++
T Consensus 7 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (457)
T 1hzh_H 7 SGAEVKKPGASVKVSCQASGYRFSNFVIHWVRQAPGQRFEWMGWINPYNGNKEFSAKFQDRVTFTADTSANTAYMELRSL 86 (457)
T ss_dssp CCCEEECTTCCEEECEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECTTTTTTEEEEEETTTTEEEEEECSC
T ss_pred CCceEEcCCCCEEEEEEecCccccCcEEEEEEeCCCCCcEEEEEEecCCCceecCccccCceEEEEeCCCCEEEEEECCC
Confidence 4457899999999999998765 678999998632 222 22 11 111 125799987655567899999999
Q ss_pred CCCCCEEEEEeecCC
Q psy14080 81 QKRDNGTYECQAQPY 95 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~ 95 (113)
+.+|+|.|+|.+...
T Consensus 87 ~~~D~G~Y~C~~~~~ 101 (457)
T 1hzh_H 87 RSADTAVYYCARVGP 101 (457)
T ss_dssp CGGGCEEEEEEECCC
T ss_pred CcccCEEEEEEEecC
Confidence 999999999999643
No 306
>2qsq_A Carcinoembryonic antigen-related cell adhesion MO; glycoprotein, GPI-anchor, immunoglobulin DOMA lipoprotein, membrane; 1.95A {Homo sapiens} PDB: 2qst_A 2ver_N* 2gk2_A
Probab=99.51 E-value=1e-13 Score=87.69 Aligned_cols=89 Identities=11% Similarity=-0.002 Sum_probs=62.1
Q ss_pred EEEecCCcEEEEEEEccCCCCEEEEEecCC----CeEEEe--cce-EEc---CCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 16 STGFLAVFSYSDKTVRDIVKVRVSWVRRRD----WHILTS--GVL-TYT---NDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 16 ~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~----~~~l~~--~~~-~~~---~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
..+.+|++|.|.|.........+.|||... ..+... +.. ... -.+|..+. .+.+|.|+||+.+|+
T Consensus 10 ~~~~~G~~v~L~~~~~p~~~~~i~W~kg~~~~~~~~I~~y~~~~~~~~~~~~~~gR~~~~-----~ngSL~I~nvt~~D~ 84 (111)
T 2qsq_A 10 FNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIY-----PNASLLIQNIIQNDA 84 (111)
T ss_dssp SEEETTSCEEEEEESCCSSEEEEEEEESSSCCGGGEEEEEETTTTEEEECTTCCSCEEEC-----TTSCEEECSCCGGGC
T ss_pred ceeccCCCEEEEEeCCCCCceEEEEEeCCCCCCCcEEEEEECCCcceecCcccCCcEEEe-----cCCcEEEccCcccCC
Confidence 478999999999985333345799999652 123222 111 111 24688876 366999999999999
Q ss_pred EEEEEeecC-CC-CeeEEEEeceecc
Q psy14080 86 GTYECQAQP-YT-TTSHSQNAPGLGD 109 (113)
Q Consensus 86 G~Y~C~~~~-~~-~~s~~~~L~V~g~ 109 (113)
|.|+|++.. .. ..+..+.|.|...
T Consensus 85 G~Ytc~v~~~~~~~~~~~~~L~V~~~ 110 (111)
T 2qsq_A 85 GFYTLHVIKSDLVNEEATGQFRVYPE 110 (111)
T ss_dssp EEEEEEEEETTSCCEEEEEEEEEECC
T ss_pred eEEEEEEEeCCCcEEEEEEEEEEecC
Confidence 999999954 33 4677889988753
No 307
>1moe_A Anti-CEA MAB T84.66; anti carcinoembryonic antigen, diabody, dimer, SCFV, variable domain, immune system; 2.60A {Mus musculus} SCOP: b.1.1.1 b.1.1.1
Probab=99.51 E-value=2e-13 Score=94.04 Aligned_cols=86 Identities=14% Similarity=0.137 Sum_probs=62.5
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCC--CCEEEEEecCC---CeEE-Eec---ce-EE--cCCCCEEEEEeCCCCcEEE
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRD---WHIL-TSG---VL-TY--TNDARFQVIHTDGSDDWNL 75 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~---~~~l-~~~---~~-~~--~~~~R~~~~~~~~~~~~~L 75 (113)
+........++.+|++++|.|.+.+.+ .+.|.|||+.. ...+ ... .. .. ...+||.+..+.....++|
T Consensus 121 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 200 (240)
T 1moe_A 121 VQLQQSGAELVEPGASVKLSCTASGFNIKDTYMHWVKQRPEQGLEWIGRIDPANGNSKYVPKFQGKATITADTSSNTAYL 200 (240)
T ss_dssp CEEEECCCEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTSCCEEEEEEETTTTEEEECGGGTTTEEEEEETTTTEEEE
T ss_pred EEEeCCCceEEeCCCcEEEEEEEcCccCCCCEEEEEEECCCCCcEEEEEEcccCCccccCccccccEEEEEcccCCEEEE
Confidence 333445567899999999999999775 46899999742 2222 111 11 11 1357999876555677999
Q ss_pred EEccCCCCCCEEEEEeec
Q psy14080 76 QIKFLQKRDNGTYECQAQ 93 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~~ 93 (113)
.|.+++.+|+|.|+|.+.
T Consensus 201 ~I~~v~~~D~G~Y~C~a~ 218 (240)
T 1moe_A 201 QLTSLTSEDTAVYYCAPF 218 (240)
T ss_dssp EECSCCGGGCEEEEEEEC
T ss_pred EECcCCHHHCEEEEEEEE
Confidence 999999999999999997
No 308
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.50 E-value=3.1e-13 Score=89.78 Aligned_cols=89 Identities=17% Similarity=0.077 Sum_probs=67.3
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
+....++++.+|++++|.|.+.+.+. .+.|||.++..+ ..+.|+.+.. +....+|.|.+++.+|+|.|.
T Consensus 6 ~~~~~~~~v~~G~~v~L~C~~~~~p~-~v~W~~~~~~~~--------~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~ 74 (189)
T 2v44_A 6 TISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKI--------ISTQRVVVQK--EGVRSRLTIYNANIEDAGIYR 74 (189)
T ss_dssp EESCSEEEEETTCCEEEEEEEEECCS-EEEEECTTSCBC--------CCCSSEEEEE--ETTEEEEEECSCCGGGCEEEE
T ss_pred EecCCceEEecCCcEEEEEEeecCCe-eEEEEeCCCCcc--------CCCceEEEEC--CCCeEEEEEccCCcccCeEEE
Confidence 34456788999999999999998776 899998443222 2467887764 235679999999999999999
Q ss_pred EeecCC-CCe-eEEEEeceecc
Q psy14080 90 CQAQPY-TTT-SHSQNAPGLGD 109 (113)
Q Consensus 90 C~~~~~-~~~-s~~~~L~V~g~ 109 (113)
|.+... +.. +..+.|.|...
T Consensus 75 C~~~~~~g~~~~~~~~l~v~~~ 96 (189)
T 2v44_A 75 CQATDAKGQTQEATVVLEIYQK 96 (189)
T ss_dssp EEEECTTSCEEEEEEEEEEECC
T ss_pred EEEEeCCCCcEEEEEEEEEecC
Confidence 999643 433 67778877653
No 309
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.50 E-value=7.9e-14 Score=92.43 Aligned_cols=91 Identities=12% Similarity=0.129 Sum_probs=67.7
Q ss_pred CceeeE-eecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 5 PGGILT-AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 5 p~~i~~-~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
|+.+.. ....++++.+|++++|.|.+.+.+.+.+.|||.. ..+ ....|+.+.. +..+|.|.+++.+
T Consensus 2 pP~i~~~~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~--~~~-------~~~~~~~~~~----~~~~L~i~~~~~~ 68 (192)
T 2va4_A 2 MPAISMPQKSFNATAERGEEMTFSCRASGSPEPAISWFRNG--KLI-------EENEKYILKG----SNTELTVRNIINS 68 (192)
T ss_dssp CCEEECSCCEEEEETTSCCCEEEECEEECSSCCEEEEEETT--EEC-------CCSSSEEEET----TTTEEEECSCCGG
T ss_pred CCcccCCCCCcEEEEecCCCEEEEEeeccCCCCeEEEEECC--eEc-------CCCccEEEeC----CeeEEEEecCChh
Confidence 444443 3455788999999999999998888899999843 222 2356777652 4568999999999
Q ss_pred CCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
|+|.|.|.+. ..+..+..+.|.|..
T Consensus 69 d~G~Y~C~~~~~~~~~~~~~~l~V~~ 94 (192)
T 2va4_A 69 DGGPYVCRATNKAGEDEKQAFLQVFV 94 (192)
T ss_dssp GCEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred cCcEEEEEEEccccccceEEEEEEEc
Confidence 9999999995 445555667777754
No 310
>4fmk_A Poliovirus receptor-related protein 2; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA MAN FUC; 2.56A {Mus musculus} PDB: 4fn0_A* 4fs0_A*
Probab=99.50 E-value=1.3e-13 Score=92.68 Aligned_cols=87 Identities=15% Similarity=0.133 Sum_probs=58.7
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCCCC---EEEEEecCCCeEEEec--ceE-----EcCCCCEEEEE-----eCCCCc
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIVKV---RVSWVRRRDWHILTSG--VLT-----YTNDARFQVIH-----TDGSDD 72 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~~~---~V~W~k~~~~~~l~~~--~~~-----~~~~~R~~~~~-----~~~~~~ 72 (113)
+.......+++.+|++|+|+|.+.+.+.+ .|.|+|.++..+.... ... .....|+.... ....++
T Consensus 3 v~V~vp~~V~~~~G~~v~L~C~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (225)
T 4fmk_A 3 VRVRVLPEVRGRLGGTVELPCHLLPPTTERVSQVTWQRLDGTVVAAFHPSFGVDFPNSQFSKDRLSFVRARPETNADLRD 82 (225)
T ss_dssp CSEECCSEEEEETTSCEEECCEECSSCCCEEEEEEEECTTSCEEEEEETTTEEECCCTTSCTTTEEECCCSCSCCSSCCB
T ss_pred EEEEeCCEEEEecCCCEEEEEEEECCCCCceeEEEEEECCCcceEEEecccceeeccccccccceeeeccccccccccCc
Confidence 33455667889999999999999887655 4899997644332211 000 01234544321 123457
Q ss_pred EEEEEccCCCCCCEEEEEeecC
Q psy14080 73 WNLQIKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 73 ~~L~I~~v~~~D~G~Y~C~~~~ 94 (113)
++|+|.+++.+|+|.|+|.+..
T Consensus 83 ~sL~I~~v~~~D~G~Y~C~~~~ 104 (225)
T 4fmk_A 83 ATLAFRGLRVEDEGNYTCEFAT 104 (225)
T ss_dssp CCEEECSCCGGGCEEEEEEEEE
T ss_pred EEEEEccCCHHHCcceEEEEEe
Confidence 8999999999999999999954
No 311
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.50 E-value=3.3e-13 Score=89.65 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=68.0
Q ss_pred eecceEEEecCCcEEEEEEEccCC-CCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
..+.++.+.+|+++.|.|.+.+.+ .+.+.|+|.++..+. ..+.|+.+... +....+|.|.+++.+|+|.|.
T Consensus 7 ~~p~~~~v~~G~~v~l~C~~~~~~~~~~v~W~~~~g~~~~-------~~~~~~~~~~~-~~~~~~L~i~~~~~~d~G~Y~ 78 (191)
T 1epf_A 7 IVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLS-------PNQQRISVVWN-DDDSSTLTIYNANIDDAGIYK 78 (191)
T ss_dssp EESSSEEEETTCCEEEEEEECCCSCCCEEEEECTTSCEEC-------CBSSSEEEEEE-ETTEEEEEECSCCGGGCEEEE
T ss_pred ecCCCcEEcCCCCEEEEEECCCCCCCceEEEEeCCCcccc-------CCCCeEEEEEC-CCCceEEEEccCCcccCEEEE
Confidence 345667899999999999999876 789999984433222 13568877542 346789999999999999999
Q ss_pred EeecCC--CCeeEEEEeceec
Q psy14080 90 CQAQPY--TTTSHSQNAPGLG 108 (113)
Q Consensus 90 C~~~~~--~~~s~~~~L~V~g 108 (113)
|.+... ...+..+.|.|..
T Consensus 79 C~~~~~~~~~~~~~~~l~v~~ 99 (191)
T 1epf_A 79 CVVTAEDGTQSEATVNVKIFQ 99 (191)
T ss_dssp EEEEETTTEEEEEEEEEEEEC
T ss_pred EEEEcCCCcceEEEEEEEeec
Confidence 999543 3556777777754
No 312
>2xzc_L FAB A.17 light chain; immune system; HET: XOP; 1.36A {Homo sapiens} PDB: 2xza_L* 3kdm_L* 3nps_C 1dn0_A 1qlr_A* 2v7n_A 3eo0_A 3eo1_A 2agj_L* 2fx7_L 1tzg_L 2fx8_L 2fx9_L* 1u6a_L 3hi1_L* 3kym_A 3kyk_L 3qwo_L* 3ixt_L* 3qeg_L ...
Probab=99.50 E-value=1.1e-13 Score=94.22 Aligned_cols=93 Identities=14% Similarity=0.018 Sum_probs=64.0
Q ss_pred cceEEEecCCcEEEEEEE-ccCC-CCEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 13 GQISTGFLAVFSYSDKTV-RDIV-KVRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v-~~~~-~~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
+..+++.+|++|+|+|.+ .+.+ .+.|.|||+.. ...+....... ...+||.+.. ..+.++|+|.+++.+|+
T Consensus 7 p~~~~v~~G~~v~L~C~v~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~ 84 (216)
T 2xzc_L 7 PPSVSAAPGQKVTISCSGSSSNIGNNYVSWYQQLPGTAPKLLIYDNNKRPSGIPDRFSGSK--SGTSATLGITGLQTGDE 84 (216)
T ss_dssp CSEEEECTTCCEEEEEECCTTTGGGSCCEEEEECTTSCCEEEEBTTTBCCTTCCTTEEEEE--ETTEEEEEECSCCGGGC
T ss_pred CCcEEecCCCeEEEEEEeecCCCCCCeEEEEEeCCCCCcEEEEEecCccCCCCCCceEEec--cCCEEEEEECCCCcccC
Confidence 567889999999999995 4432 57899999763 22232211111 1256998764 45688999999999999
Q ss_pred EEEEEeecCCCC---eeEEEEecee
Q psy14080 86 GTYECQAQPYTT---TSHSQNAPGL 107 (113)
Q Consensus 86 G~Y~C~~~~~~~---~s~~~~L~V~ 107 (113)
|.|+|.+..... ......|.|.
T Consensus 85 G~Y~C~~~~~~~~~~~~~~~~l~V~ 109 (216)
T 2xzc_L 85 ADYYCGTWDSSLNPVFGGGTKLEIK 109 (216)
T ss_dssp EEEEEEEECTTSCEEEBCCEEEEEC
T ss_pred EEEEEEEEeCCCcceECCCEEEEEc
Confidence 999999965432 2334456664
No 313
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.50 E-value=3e-13 Score=92.67 Aligned_cols=93 Identities=11% Similarity=0.047 Sum_probs=60.9
Q ss_pred ceEEEecCCcEEEEEEEccCCC---CEEEEEecCCCeE-E-EecceEEc------CCCCEEEEEe-CCCCcEEEEEccCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVK---VRVSWVRRRDWHI-L-TSGVLTYT------NDARFQVIHT-DGSDDWNLQIKFLQ 81 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~---~~V~W~k~~~~~~-l-~~~~~~~~------~~~R~~~~~~-~~~~~~~L~I~~v~ 81 (113)
..+++.+|++|+|+|.+.+.+. ..|.|+|.+.... . +.+..... -..|+..... ...++++|+|.+++
T Consensus 12 ~pV~v~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~v~~~~~g~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~ 91 (226)
T 4f80_A 12 GPILAMVGEDADLPCHLFPTMSAETMELKWVSSSLRQVVNVYADGKEVEDRQSAPYRGRTSILRDGITAGKAALRIHNVT 91 (226)
T ss_dssp SCEEEETTSCEEEEEEEESCCCCTTSEEEEEETTTCCEEEEEETTEECGGGSCTTTTTTEEEECTTGGGTEEEEEESSCC
T ss_pred CCEEEEcCCcEEEEEEEECCCCCCceEEEEEECCCCceEEEEeCCeEcccccCccccceEEEecccccCCeEEEEEeeCc
Confidence 3478999999999999976543 3799999764332 2 22211111 1246665421 13467899999999
Q ss_pred CCCCEEEEEeecC-CCCeeEEEEece
Q psy14080 82 KRDNGTYECQAQP-YTTTSHSQNAPG 106 (113)
Q Consensus 82 ~~D~G~Y~C~~~~-~~~~s~~~~L~V 106 (113)
.+|+|.|+|.+.. .+..+..+.+.+
T Consensus 92 ~~D~G~Y~C~a~n~~~~~~~~v~~~~ 117 (226)
T 4f80_A 92 ASDSGKYLCYFQDGDFYEKALVELKV 117 (226)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEE
T ss_pred hHHCeeEEEEEECCCcEEEEEEEEee
Confidence 9999999999954 334444444443
No 314
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.49 E-value=1.6e-13 Score=92.39 Aligned_cols=89 Identities=12% Similarity=0.008 Sum_probs=64.3
Q ss_pred cceEEEecCCcEEEEEEEccCCC-----CEEEEEecCCCeEEEecceEEcCCCCEEEEEe-CCCCcEEEEEccCCCCCCE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVK-----VRVSWVRRRDWHILTSGVLTYTNDARFQVIHT-DGSDDWNLQIKFLQKRDNG 86 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~-----~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~-~~~~~~~L~I~~v~~~D~G 86 (113)
...+++.+|+++.|+|.+.+.+. +.|.|+|.+.. .. ...+|+.+..+ ...++++|.|.+++.+|+|
T Consensus 9 ~~~v~v~~G~~v~L~C~~~~~p~~~~~~~~v~W~k~~~~-~~-------~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G 80 (202)
T 3bp6_B 9 KEVYTVDVGSSVSLECDFDRRECTELEGIRASLQKVEND-TS-------LQSERATLLEEQLPLGKALFHIPSVQVRDSG 80 (202)
T ss_dssp CSEEEEETTSCEEEEEEECTTC---CTTEEEEEEECC---CC-------CBCSSCEECGGGGGGTEEEEEECSCCGGGCE
T ss_pred CcCEEEeCCCcEEEEEEecCCCCCCccceEEEEEcCCCc-cc-------ccCCceEEeeccccCCeeEEEECCCCHHHCc
Confidence 34678999999999999988765 78999993321 11 12457766421 1125689999999999999
Q ss_pred EEEEeecC-CCCeeEEEEeceecc
Q psy14080 87 TYECQAQP-YTTTSHSQNAPGLGD 109 (113)
Q Consensus 87 ~Y~C~~~~-~~~~s~~~~L~V~g~ 109 (113)
.|.|.+.. ....+..+.|.|.+.
T Consensus 81 ~Y~C~~~~~~~~~~~~~~l~V~~~ 104 (202)
T 3bp6_B 81 QYRCLVICGAAWDYKYLTVKVKAS 104 (202)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEBC
T ss_pred EEEEEEEeCCCcceEEEEEEecCC
Confidence 99999954 344577888888764
No 315
>2vsd_A CHIR AB1; immune system receptor, FC receptor; HET: NAG NDG MAN; 1.82A {Gallus gallus}
Probab=99.49 E-value=6.1e-14 Score=87.30 Aligned_cols=93 Identities=14% Similarity=0.036 Sum_probs=61.8
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+..+...+.. .+.+|++|+|.|.....+ ..+.|||.. ..+.. .|+. ......+|.|.+++.+|
T Consensus 4 ~kP~i~~~p~~-~v~~G~~VtL~C~~~~~~-~~~~w~k~g--~~~~~--------~~~~----~~~~~~~l~I~~v~~~d 67 (105)
T 2vsd_A 4 PQPSLSLHPSQ-GVSLGDTVTLRCHLPRMA-AWVQLWLNG--TLRFD--------KEKD----KEQDAAEFSFAVTNLED 67 (105)
T ss_dssp CCCEEEEESCS-SCCTTCEEEEEEECCSSC-EEEEEEETT--EEEEE--------EEEC----TTCSEEEEEEECCSGGG
T ss_pred CCCEEEeCCCC-CcCcCCCEEEEEEcCCCC-cEEEEEECC--cccee--------eecc----CCCCEEEEEECCCCHHH
Confidence 55555555544 789999999999998653 567899843 22211 1211 23356799999999999
Q ss_pred CEEEEEeecC-C----CCeeEEEEeceecccccC
Q psy14080 85 NGTYECQAQP-Y----TTTSHSQNAPGLGDLLMH 113 (113)
Q Consensus 85 ~G~Y~C~~~~-~----~~~s~~~~L~V~g~~~~~ 113 (113)
+|.|+|.+.. . ...|..+.|.|.|..+.|
T Consensus 68 sG~Y~C~~~n~~~~~~s~~Sdpl~L~V~~~~~~~ 101 (105)
T 2vsd_A 68 AGTYQCRYQVSEPLWTSNQSDPVELVLTIEGRHH 101 (105)
T ss_dssp CEEEEEEEEEETTEEECCCCCCEEECCC------
T ss_pred CeEEEEEEEcCCCCcccCCCCCEEEEEEEecccc
Confidence 9999999953 2 345788999999988765
No 316
>1ccz_A Protein (CD58); LFA-3, glycoprotein; HET: NAG; 1.80A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1ci5_A 1qa9_B
Probab=99.49 E-value=2.1e-14 Score=96.06 Aligned_cols=90 Identities=16% Similarity=0.057 Sum_probs=63.9
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEc----CCCCEEEEEeCCCCcEEEEEccCCCCCCEEE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYT----NDARFQVIHTDGSDDWNLQIKFLQKRDNGTY 88 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~----~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (113)
.+.+.+.+|++|+|+|.+.. +.+.|.|+|... .+......... -.+|+.+. ..+.+|.|.+++.+|+|.|
T Consensus 2 ~~~v~~~~G~~VtL~c~~~~-~~~~i~W~~~~~-~i~~~~~~~~~~~~~~~~R~~~~----~~~~sL~I~~v~~~DsG~Y 75 (171)
T 1ccz_A 2 SQQIYGVVYGNVTFHVPSNV-PLKEVLWKKQKD-KVAELENSEFRAFSSFKNRVYLD----TVSGSLTIYNLTSSDEDEY 75 (171)
T ss_dssp EEEEEEETTCCEEECCCCSS-CCSCEEEEETTE-EEEEEETTEEEECGGGTTSEEEC----TTTCCEEECSCCGGGCEEE
T ss_pred ccEEEEEcCCCEEEcCCCCC-CcceEEEEeCCc-EEEEEcCCCcccccccCCcEEEe----CCCCeEEECCCChhhCceE
Confidence 35678999999999999864 778999998643 33322111111 13466653 2456999999999999999
Q ss_pred EEeecCCCCeeEEEEeceecc
Q psy14080 89 ECQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 89 ~C~~~~~~~~s~~~~L~V~g~ 109 (113)
.|.+..... +..++|.|.+.
T Consensus 76 ~C~~~n~~~-~~~~~L~V~~~ 95 (171)
T 1ccz_A 76 EMESPNITD-TMKFFLYVLEM 95 (171)
T ss_dssp EEECTTCCS-CEEEEEEEECC
T ss_pred EEEEeCCCC-cEEEEEEEECc
Confidence 999964333 77788988764
No 317
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.49 E-value=4.1e-13 Score=95.21 Aligned_cols=93 Identities=14% Similarity=0.146 Sum_probs=72.8
Q ss_pred ceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 6 GGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 6 ~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
+.+.......+++.+|+++.|.|.+.+.+.+.+.|+|.. ..+ ..+.|+.+.. .+.+..+|.|.+++.+|+
T Consensus 222 p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~g--~~~-------~~~~~~~~~~-~~~~~~~L~i~~v~~~d~ 291 (317)
T 2y25_A 222 ARVLGGLPDVVTIQEGKALNLTCNVWGDPPPEVSWLKNE--KAL-------ASDDHCNLKF-EAGRTAYFTINGVSTADS 291 (317)
T ss_dssp CEEEEBCCSEEEEETTSBBCEEEEEECSSCCEEEEEESS--SEE-------CCCSSEEECC-BTTTEEEEEEBSCCSTTC
T ss_pred CcccccCCccEEEEcCCEEEEEEEEecCCCCEEEEEECC--EeC-------CCCCcEEEEE-cCCCEEEEEECCCCHHHC
Confidence 444555566789999999999999999898999999843 222 2456777653 224557999999999999
Q ss_pred EEEEEee-cCCCCeeEEEEeceec
Q psy14080 86 GTYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 86 G~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
|.|.|.+ +..+..+..+.|.|..
T Consensus 292 G~Y~C~a~N~~g~~~~~~~l~V~~ 315 (317)
T 2y25_A 292 GKYGLVVKNKYGSETSDFTVSVFI 315 (317)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEeCCCeEEEEEEEEEEc
Confidence 9999999 5667788889998874
No 318
>3qr2_A Basigin; CD147, EMMPRIN, immunoglobulin-like domain, beta sheet, STRU genomics, berkeley structural genomics center, BSGC, cell A; 2.30A {Homo sapiens} PDB: 3qqn_A
Probab=99.49 E-value=5e-13 Score=85.91 Aligned_cols=89 Identities=13% Similarity=0.112 Sum_probs=59.5
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEE--cCCCCEEEEE-eCCCCcEEEEEccC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTY--TNDARFQVIH-TDGSDDWNLQIKFL 80 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~--~~~~R~~~~~-~~~~~~~~L~I~~v 80 (113)
.|+.++. ...++++.+|++++|.|.+.+.+.+.|.|+|.......... ... ....|+.+.. .......+|.|.++
T Consensus 20 ~pP~~~~-~p~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~L~I~~v 97 (137)
T 3qr2_A 20 HMAGFVQ-APLSQQRWVGGSVELHCEAVGSPVPEIQWWFEGQGPNDICS-QLWDGARLDRVHIHATYHQHAASTISIDTL 97 (137)
T ss_dssp -CCEEEE-CCCCEEEETTSCEEEEEEEECSSCCEEEEEEEESSTTCCCE-ECCTTHHHHTEEEEEEESSSEEEEEEECSC
T ss_pred CCCeEEc-CCCCEEEeCCCCEEEEEEEeeecCCeEEEEECCCCccccce-eecccCcccceEEecccccccceEEEECCC
Confidence 4555544 45778999999999999999999999999995421100000 000 0123555432 12234679999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+.+|+|.|+|.+..
T Consensus 98 ~~~D~G~Y~C~a~N 111 (137)
T 3qr2_A 98 VEEDTGTYECRASN 111 (137)
T ss_dssp CGGGCEEEEEEEEC
T ss_pred CcccCEEEEEEEEe
Confidence 99999999999953
No 319
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.49 E-value=1.9e-13 Score=90.86 Aligned_cols=97 Identities=12% Similarity=0.103 Sum_probs=69.4
Q ss_pred ccCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 2 VAAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 2 ~~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
.+.|+.+.. ....+.+.+|++++|.|.+.+.+.+.+.|+|.. . .+.. ....|+.+.. ..+..+|.|.+++
T Consensus 2 ~~~~P~~~~-~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~-~-~~~~-----~~~~~~~~~~--~~~~~~L~i~~~~ 71 (194)
T 2a38_A 2 TTQAPTFTQ-PLQSVVVLEGSTATFEAHISGFPVPEVSWFRDG-Q-VIST-----STLPGVQISF--SDGRAKLTIPAVT 71 (194)
T ss_dssp CCEEEEEEE-CCCCEEEETTSCEEEEEEEEEESCCEEEEEESS-S-BCCT-----TTSTTCEEEE--ETTEEEEEESSCC
T ss_pred CCCCCeEEc-cCCceEEECCCEEEEEEEEEecCCCEEEEEECC-E-Eccc-----ccCCceEEEe--CCCEEEEEECCCC
Confidence 344555554 446689999999999999998888899999843 2 2211 1124666543 2457899999999
Q ss_pred CCCCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
.+|+|.|.|.+. ..+..+..+.|.|.+
T Consensus 72 ~~d~G~Y~C~~~n~~~~~~~~~~l~v~~ 99 (194)
T 2a38_A 72 KANSGRYSLKATNGSGQATSTAELLVKA 99 (194)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred cccCEEEEEEEEcCCceEeEEEEEEEcc
Confidence 999999999995 445556667777763
No 320
>3bfo_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1 (isoform 2); hydrolase, immunoglobulin domain, nucleus, protease; 1.15A {Homo sapiens}
Probab=99.49 E-value=2.2e-13 Score=81.85 Aligned_cols=79 Identities=10% Similarity=0.008 Sum_probs=58.6
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
...+...++.+|+++.|.|.+.+.+.+.+.|||.. ..+. .....+|.|.+++.+|+|.|+
T Consensus 7 ~~~p~~~~v~~G~~~~l~C~~~g~p~p~i~W~~~~--~~~~------------------~~~~~~L~i~~v~~~d~G~Y~ 66 (91)
T 3bfo_A 7 CVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNE--LPLT------------------HETKKLYMVPYVDLEHQGTYW 66 (91)
T ss_dssp EECCCCEEECTTSCEEEECEEECSSCCEEEEEETT--EECT------------------TCCSSEEEESSCCGGGCEEEE
T ss_pred EECCCccEecCCCcEEEEEEeccCCCCEEEEEcCC--eeCC------------------cCCCCeEEECCCCHHhCEEEE
Confidence 33455678999999999999999888999999842 2211 112348999999999999999
Q ss_pred EeecC-CCC-eeEEEEeceec
Q psy14080 90 CQAQP-YTT-TSHSQNAPGLG 108 (113)
Q Consensus 90 C~~~~-~~~-~s~~~~L~V~g 108 (113)
|.+.. .+. .+..+.|.|.+
T Consensus 67 C~a~n~~g~~~s~~~~l~V~~ 87 (91)
T 3bfo_A 67 CHVYNDRDSQDSKKVEIIIDE 87 (91)
T ss_dssp EEEECSSCEEECCCEEEEEC-
T ss_pred EEEEcCCCCEEeeeEEEEEeh
Confidence 99954 343 34567777764
No 321
>1igt_B IGG2A intact antibody - MAB231; intact immunoglobulin V region C region, immunoglobulin; HET: NAG FUL BMA MAN GAL FUC; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.48 E-value=2.2e-13 Score=101.75 Aligned_cols=96 Identities=14% Similarity=0.099 Sum_probs=67.4
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---e-EEEec---ce-EE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---H-ILTSG---VL-TY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~-~l~~~---~~-~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+..+ . ++... .. .. ...+||.+..+...+.++|+|.++
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 86 (444)
T 1igt_B 7 SGGGLVQPGGSLKLSCATSGFTFSDYYMYWVRQTPEKRLEWVAYISNGGGSTYYPDTVKGRFTISRDNAKNTLYLQMSRL 86 (444)
T ss_dssp ECCCEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTSSCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCCeEEcCCCCEEEEEEcCCCccCCceEEEEEeCCCCCcEEEEEEecCCCceecCcccCCceEEEEeCCCCeEEEEECCC
Confidence 4557899999999999998753 578999998632 1 22211 00 01 124799987655567899999999
Q ss_pred CCCCCEEEEEeecCCC-C---eeEEEEeceec
Q psy14080 81 QKRDNGTYECQAQPYT-T---TSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~~-~---~s~~~~L~V~g 108 (113)
+.+|+|.|+|.+.... . ....+.|.|..
T Consensus 87 ~~~D~G~Y~C~~~~~~~~~~~~~~~~~l~V~~ 118 (444)
T 1igt_B 87 KSEDTAMYYCARHGGYYAMDYWGQGTTVTVSS 118 (444)
T ss_dssp CGGGCEEEEEEEECSSSCEEEEBCCEEEEECS
T ss_pred CHHHCEEEEEEEecCCcccccccCcEEEEecC
Confidence 9999999999996542 2 23345676663
No 322
>1he7_A High affinity nerve growth factor receptor; transferase, TRK-receptor, strand-swapping; 2.0A {Homo sapiens} SCOP: b.1.1.4 PDB: 1wwa_X 1www_X
Probab=99.48 E-value=3.5e-13 Score=87.35 Aligned_cols=81 Identities=15% Similarity=0.115 Sum_probs=62.5
Q ss_pred cCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeC-----CCCcEEEEEccCCCCCCEEEEEee-c
Q psy14080 20 LAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTD-----GSDDWNLQIKFLQKRDNGTYECQA-Q 93 (113)
Q Consensus 20 ~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~~-~ 93 (113)
.+..+.|.|.+.+.+.+.|.|+|. +..|. .++|+.+.... ....++|+|.+++.+|+|.|+|.+ +
T Consensus 14 ~~~~~~l~c~v~G~P~P~I~W~kn--G~~l~-------~~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~D~G~YtC~A~N 84 (126)
T 1he7_A 14 EMHHWCIPFSVDGQPAPSLRWLFN--GSVLN-------ETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLLAAN 84 (126)
T ss_dssp CCCEEEEEEEECCSSCCEEEEEET--TEECC-------CCSSEEEEEECCCSSCCCEEEEEEEESCCGGGCEEEEEEEEE
T ss_pred cCccEEEEEEEeeeCCCeEEEEEC--CEECC-------CCCceeEEEeeccccccccceEEEECcCCCCCCEEEEEEEEE
Confidence 578999999999999999999983 44432 34555443211 113579999999999999999999 6
Q ss_pred CCCCeeEEEEeceecc
Q psy14080 94 PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 94 ~~~~~s~~~~L~V~g~ 109 (113)
..+..+..+.|.|+..
T Consensus 85 ~~G~~~~t~~l~v~~~ 100 (126)
T 1he7_A 85 PFGQASASIMAAFMDN 100 (126)
T ss_dssp TTEEEEEEEEECCCSC
T ss_pred CCCeEEEEEEEEEEcC
Confidence 7788888999988753
No 323
>2va4_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; transmembrane, phosphorylation, immunoglobulin domain, membrane, glycoprotein; HET: NAG; 1.9A {Homo sapiens} PDB: 2xy1_A*
Probab=99.48 E-value=3.8e-13 Score=89.09 Aligned_cols=89 Identities=20% Similarity=0.170 Sum_probs=68.5
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-c
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA-Q 93 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-~ 93 (113)
...+.+|+++.|.|.+.+.+.+.+.|+|..++..+..+. ...+.|+.+.. .....+|.|.+++.+|+|.|.|.+ +
T Consensus 103 ~~~~~~g~~v~l~C~~~~~p~~~v~W~~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~n 178 (192)
T 2va4_A 103 NETTYENGQVTLVCDAEGEPIPEITWKRAVDGFTFTEGD--KSLDGRIEVKG--QHGSSSLHIKDVKLSDSGRYDCEAAS 178 (192)
T ss_dssp CEEECTTSEEEEEEEEEEESCCEEEEEETTTTEEECTTC--BCTTSCEEEEE--ETTEEEEEEESCCGGGCEEEEEEEEC
T ss_pred cceEEeCCeEEEEEEecCCCCCcEEEEeCCCCceeeccc--cccCCcEEEee--ccCceEEEEecCCcccCEEEEEEEEe
Confidence 346788999999999998888899999975555443221 12356787753 235679999999999999999999 4
Q ss_pred CCCCeeEEEEecee
Q psy14080 94 PYTTTSHSQNAPGL 107 (113)
Q Consensus 94 ~~~~~s~~~~L~V~ 107 (113)
..+..+..+.|.|+
T Consensus 179 ~~g~~~~~~~l~V~ 192 (192)
T 2va4_A 179 RIGGHQKSMYLDIE 192 (192)
T ss_dssp SSCEEEEEEEEEEC
T ss_pred cCCceEEEEEEEeC
Confidence 56777888888874
No 324
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.48 E-value=5.2e-13 Score=94.91 Aligned_cols=94 Identities=24% Similarity=0.297 Sum_probs=68.2
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC-C
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK-R 83 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~-~ 83 (113)
|+.+. ....++++.+|++++|.|.+.+.+.+.|.|+|.. ..+ ...|+......+....+|.|.+++. +
T Consensus 6 ~P~~~-~~p~~~~v~~G~~v~l~C~~~g~p~~~i~W~k~g--~~i--------~~~~~~~~~~~~~~~~~L~i~~~~~~~ 74 (304)
T 2yd9_A 6 PPRFI-KEPKDQIGVSGGVASFVCQATGDPKPRVTWNKKG--KKV--------NSQRFETIEFDESAGAVLRIQPLRTPR 74 (304)
T ss_dssp CCEEE-ECCCCEEEETTSCEEEEEEEECSSCCEEEEC-----------------CTTEEEEEETTTTEEEEEECSCCTTT
T ss_pred CCeee-ecCCceEecCCCeEEEEEEEEEeCCCeEEEEECC--EEC--------CCCceEEEEecCCCceEEEEecccccC
Confidence 44444 4456789999999999999998888899999843 222 2457776543444458999999998 9
Q ss_pred CCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
|+|.|+|.+. ..+..+..+.|.|...
T Consensus 75 D~G~Y~C~a~n~~g~~~~~~~l~V~~~ 101 (304)
T 2yd9_A 75 DENVYECVAQNSVGEITVHAKLTVLRE 101 (304)
T ss_dssp TCSEEEEEEECSSCEECCEEEEEEECG
T ss_pred CCeEEEEEEECCCCeEEEEEEEEEecc
Confidence 9999999995 4455667788888654
No 325
>2id5_A Lingo-1, leucine rich repeat neuronal 6A; CNS-specific LRR-IG containing, ligand binding protein,membr protein; HET: NAG MAN; 2.70A {Homo sapiens}
Probab=99.48 E-value=5.3e-14 Score=106.39 Aligned_cols=92 Identities=18% Similarity=0.175 Sum_probs=68.1
Q ss_pred ceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 6 GGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 6 ~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
+.+.+.....+++.+|++|+|.|.+.+.|.+.|.|+|.... +... ....|+.+. .+.+|.|.+++.+|+
T Consensus 385 P~i~~~~~~~~~v~~G~~v~l~C~~~g~P~p~i~W~~~~~~-~~~~-----~~~~~~~~~-----~~~~L~i~~v~~~d~ 453 (477)
T 2id5_A 385 ARIRDRKAQQVFVDEGHTVQFVCRADGDPPPAILWLSPRKH-LVSA-----KSNGRLTVF-----PDGTLEVRYAQVQDN 453 (477)
T ss_dssp EEESCCSCEEEEEETTCCEEECCCEEEESCCEEEEECTTSC-BC------------CEEC-----TTSCEEESSCCSTTC
T ss_pred ccccccccccEEEeCCCeEEEEEeccccCCCEEEEEECCcc-cccc-----CCCceEEeC-----CCCEEEEeeCChHHC
Confidence 34444455778999999999999999999999999985432 2110 134577654 234799999999999
Q ss_pred EEEEEee-cCCCCeeEEEEeceec
Q psy14080 86 GTYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 86 G~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
|.|+|.+ +..+..+..+.|.|.|
T Consensus 454 G~Y~C~a~N~~g~~~~~~~l~V~~ 477 (477)
T 2id5_A 454 GTYLCIAANAGGNDSMPAHLHVRS 477 (477)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EEEEEEEEeCCCcEEEEEEEEEeC
Confidence 9999999 5667788889999875
No 326
>1yjd_C TP44, T-cell-specific surface glycoprotein CD28; IGSF, CD28 homodimer, immune system-signaling protein comple; HET: NAG; 2.70A {Homo sapiens} SCOP: b.1.1.1
Probab=99.48 E-value=2.7e-13 Score=89.38 Aligned_cols=98 Identities=12% Similarity=0.088 Sum_probs=63.1
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCC---EEEEEecCCC--eEE-Eecc--e--EEcCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKV---RVSWVRRRDW--HIL-TSGV--L--TYTNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~---~V~W~k~~~~--~~l-~~~~--~--~~~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
++ ...+.+.+|+ |+|.|.+...... .++||||.++ .++ ..++ . ......++.......++.++|+|.+
T Consensus 8 tQ-p~~l~~~~G~-VtL~C~y~~~~~~~e~~~~WYrq~pg~~~~l~~~~~~~~~~~~~~~~~~~~~~s~s~~s~sLtIs~ 85 (140)
T 1yjd_C 8 KQ-SPMLVAYDNA-VNLSCKYSYNLFSREFRASLHKGLDSAVEVCVVYGNYSQQLQVYSKTGFNCDGKLGNESVTFYLQN 85 (140)
T ss_dssp EC-CSEEECBTTB-EEEEEEESCCSSCSEEEEEEEESTTCCCEEEEEEEESSSCCEEECSSSCEEEEEECSSEEEEEEES
T ss_pred EC-CCeEEEeCCE-EEEEEECCCCCccceeEEEEEecCCCCceEEEEecCccccccccCCCCceEEeeccCCEEEEEECC
Confidence 44 5667889999 9999999654443 5999999743 222 2111 1 1122224444433567899999999
Q ss_pred CCCCCCEEEEEeecC-C-C-C----eeEEEEeceecc
Q psy14080 80 LQKRDNGTYECQAQP-Y-T-T----TSHSQNAPGLGD 109 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~-~-~-~----~s~~~~L~V~g~ 109 (113)
++.+|+|+|+|++.. . | . ......|.|++.
T Consensus 86 l~~~Dta~YfCa~~~~~ppp~~~~~~g~GT~l~V~e~ 122 (140)
T 1yjd_C 86 LYVNQTDIYFCKIEVMYPPPYLDNEKSNGTIIHVKGK 122 (140)
T ss_dssp CCGGGCEEEEEEEEEEESSSCEEBCCCCCEEEECC--
T ss_pred CChhhCEEEEEEEEecCCCceeeeecCCCEEEEEEec
Confidence 999999999999953 1 2 1 224556666654
No 327
>1svz_A Immunoglobulin;, single-chain FV fragment 1696; antibody-antigen complex, HIV inhibiting antibody; 1.89A {Mus musculus} PDB: 1jp5_A
Probab=99.47 E-value=3.1e-13 Score=93.78 Aligned_cols=80 Identities=16% Similarity=0.149 Sum_probs=58.3
Q ss_pred eEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---e-EEEecc----eEE--cCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 15 ISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---H-ILTSGV----LTY--TNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~-~l~~~~----~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
...+.+|++|+|.|.+.+.+ .+.|.|||+..+ . ++.... ..+ ..++||.+..+...+.++|.|.+++.
T Consensus 136 ~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v~~ 215 (247)
T 1svz_A 136 PELKKPGETVKISCKATNYAFTDYSMHWVKQAPGGDLKYVGWINTETDEPTFADDFKGRFAFSLDTSTSTAFLQINNLKN 215 (247)
T ss_dssp CEEECTTCCEEEEEEEESSCGGGSCEEEEEECTTCCEEEEEEECTTTCCEEECGGGSSSEEEEEEGGGTEEEEEECSCCG
T ss_pred ceeecCCCcEEEEEEEcCcccCCcEEEEEEeCCCCCcEEEEEEEcCCCccccCccccCcEEEEEecCCCEEEEEECCCCh
Confidence 34699999999999998764 568999998632 1 221110 011 12579988754455678999999999
Q ss_pred CCCEEEEEeecC
Q psy14080 83 RDNGTYECQAQP 94 (113)
Q Consensus 83 ~D~G~Y~C~~~~ 94 (113)
+|+|.|+|.+..
T Consensus 216 ~DsG~Y~C~a~n 227 (247)
T 1svz_A 216 EDTATYFCVRDR 227 (247)
T ss_dssp GGCEEEEEEEEE
T ss_pred hHCEEEEEEEec
Confidence 999999999964
No 328
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.47 E-value=6.3e-13 Score=89.12 Aligned_cols=94 Identities=14% Similarity=0.018 Sum_probs=68.9
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeE--EEecce-EEcCCCCEEEEEeCCCCcEEEEEccCCCCCCE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHI--LTSGVL-TYTNDARFQVIHTDGSDDWNLQIKFLQKRDNG 86 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~--l~~~~~-~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 86 (113)
......+++.+|+++.|.|.+.+.+.+.|.|+|...... ...+.. ......|+.+. ..+|.|.+++.+|+|
T Consensus 5 ~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~------~~~L~i~~v~~~D~G 78 (212)
T 1f97_A 5 YTAQSDVQVPENESIKLTCTYSGFSSPRVEWKFVQGSTTALVCYNSQITAPYADRVTFS------SSGITFSSVTRKDNG 78 (212)
T ss_dssp ECSCSEEEEETTCCEEEECEEESCSSEEEEEEEEETTEEEEEEETTEECGGGTTTEEEE------TTEEEESCCCGGGCE
T ss_pred EecCCCeEEEcCCCEEEEeEeCCCCCcEEEEEECCCceeeEEecCCcccccccCcEEee------ceeEEEcccCcccCe
Confidence 345567899999999999999988888999999764421 111111 11235788775 379999999999999
Q ss_pred EEEEeecC-CC--CeeEEEEeceecc
Q psy14080 87 TYECQAQP-YT--TTSHSQNAPGLGD 109 (113)
Q Consensus 87 ~Y~C~~~~-~~--~~s~~~~L~V~g~ 109 (113)
.|.|.+.. .+ ..+..+.|.|...
T Consensus 79 ~Y~C~~~~~~g~~~~~~~~~l~V~~~ 104 (212)
T 1f97_A 79 EYTCMVSEEGGQNYGEVSIHLTVLVP 104 (212)
T ss_dssp EEEEEEEETTSSSEEEEEEEEEEEBC
T ss_pred EEEEEEEccCCCcccEEEEEEEEEcC
Confidence 99999954 22 4567788888654
No 329
>3fku_X Neutralizing antibody F10; influenza, hemagglutinin, SCFV, F membrane, envelope protein, fusion protein, membrane, trans virion; HET: NAG BMA; 3.20A {Homo sapiens}
Probab=99.47 E-value=4.4e-14 Score=100.70 Aligned_cols=91 Identities=18% Similarity=0.166 Sum_probs=63.4
Q ss_pred EEEecCCcEEEEEEEcc-CC-CCEEEEEecCCC---eEEEecceE--EcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEE
Q psy14080 16 STGFLAVFSYSDKTVRD-IV-KVRVSWVRRRDW---HILTSGVLT--YTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTY 88 (113)
Q Consensus 16 ~tv~~G~~a~L~C~v~~-~~-~~~V~W~k~~~~---~~l~~~~~~--~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (113)
+++.+|++|+|.|.+.+ .. .+.+.|||+.++ ..+...... ....+||.+.. +...++|+|.+++.+|+|+|
T Consensus 149 ~~v~~G~~v~L~C~~~~~~~~~~~v~W~r~~~~~~~~~l~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~DsG~Y 226 (280)
T 3fku_X 149 VSKGLRQTATLTCTGNSNNVGNQGAAWLQQHQGHPPKLLSYRNNDRPSGISERFSASR--SGNTASLTITGLQPEDEADY 226 (280)
T ss_dssp EEECTTCCEEEEEECCCCCCCTTCCEEEEECSSSCCEESCCTTCCCCSSSCTTEEEEE--ETTEEEEEECSCCGGGCSEE
T ss_pred EEEecCCCEEEEEEecCCCCCCceEEEEEECCCCCCEEEEEeccccCCCCCCCEEEEc--cCCEEEEEECCCCHHHCEEE
Confidence 88999999999999987 33 478999998642 222211111 12357998864 35678999999999999999
Q ss_pred EEeecCCC----CeeEEEEeceec
Q psy14080 89 ECQAQPYT----TTSHSQNAPGLG 108 (113)
Q Consensus 89 ~C~~~~~~----~~s~~~~L~V~g 108 (113)
+|.+.... .....+.|.|.+
T Consensus 227 ~C~~~~~~~~~~~~g~~t~l~V~~ 250 (280)
T 3fku_X 227 YCSTWDSSLSAVVFGGGTKLTVLG 250 (280)
T ss_dssp EEEEEETTTTEEEEBCCCEEEEC-
T ss_pred EEEEecCCCCceEECCCEEEEECC
Confidence 99995432 233445666654
No 330
>3pv7_A B7-H6, IG-like domain-containing protein DKFZP686O24166/DKFZP686I21167; NK cell receptor, receptor-ligand complex, immune system; HET: NAG; 2.00A {Homo sapiens} PDB: 3pv6_A*
Probab=99.47 E-value=5.2e-14 Score=97.60 Aligned_cols=101 Identities=12% Similarity=0.054 Sum_probs=65.9
Q ss_pred eeeEeecceEEEecCCcEEEEEEEccCCCC-----EEEEEecCCC---eEEEe---cceE--EcCCCCEEEEEeCCCCcE
Q psy14080 7 GILTAFGQISTGFLAVFSYSDKTVRDIVKV-----RVSWVRRRDW---HILTS---GVLT--YTNDARFQVIHTDGSDDW 73 (113)
Q Consensus 7 ~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~-----~V~W~k~~~~---~~l~~---~~~~--~~~~~R~~~~~~~~~~~~ 73 (113)
.+.......+++.+|++|+|+|.+.+.+.+ .|.|+|.... .++.+ +... +....|+... ....+++
T Consensus 4 ~v~v~~p~~~~v~~G~~v~L~C~~~g~p~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 82 (248)
T 3pv7_A 4 KVEMMAGGTQITPLNDNVTIFCNIFYSQPLNITSMGITWFWKSLTFDKEVKVFEFFGDHQEAFRPGAIVSPW-RLKSGDA 82 (248)
T ss_dssp EEECSTTSEEEEETTSCEEECCEEEESSCCCTTSCEEEEEEECSSCCCEEEEEEEESSCEEESSTTCBCCHH-HHTTTBC
T ss_pred EEEEeCCCCeEEeCCCCEEEeeEEecCCCcCCCceEEEEEEEcCCCCcceEEEEecCCcccccCCceEEEec-cCCCCcE
Confidence 344455667889999999999999876544 4999997532 12111 1110 1111222111 1234677
Q ss_pred EEEEccCCCCCCEEEEEeecCC-CCeeEEEEeceec
Q psy14080 74 NLQIKFLQKRDNGTYECQAQPY-TTTSHSQNAPGLG 108 (113)
Q Consensus 74 ~L~I~~v~~~D~G~Y~C~~~~~-~~~s~~~~L~V~g 108 (113)
+|.|.+++.+|+|.|+|.+... ...+..+.|.|.+
T Consensus 83 sL~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~ 118 (248)
T 3pv7_A 83 SLRLPGIQLEEAGEYRCEVVVTPLKAQGTVQLEVVA 118 (248)
T ss_dssp CEEESSCCGGGCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred EEEeCCCCHHHCeEEEEEEEeCCccceeEEEEEEec
Confidence 8999999999999999999543 4556778888875
No 331
>2a38_A Titin; Z1Z2, structural protein; 2.00A {Homo sapiens} PDB: 1ya5_A 2f8v_A
Probab=99.47 E-value=3.4e-13 Score=89.61 Aligned_cols=85 Identities=19% Similarity=0.098 Sum_probs=66.6
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
......+.+|+++.|.|.+.+.+.+.+.|+|.. ..+ ..+.|+.+.. +...++|.|.+++.+|+|.|+|.
T Consensus 109 ~~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~--~~~-------~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~ 177 (194)
T 2a38_A 109 RLQSMTVRQGSQVRLQVRVTGIPTPVVKFYRDG--AEI-------QSSLDFQISQ--EGDLYSLLIAEAYPEDSGTYSVN 177 (194)
T ss_dssp CCCCEEECTTEEEEEEEEEEEESCCEEEEEETT--EEC-------CCSSSEEEEE--ETTEEEEEEEEECGGGCEEEEEE
T ss_pred CCccEEEcCCCEEEEEEEEEEecCCeEEEEECC--EEC-------CCCCcEEEEE--cCCEEEEEECCCChhcCeEEEEE
Confidence 344678899999999999998888899999843 222 2356777653 23567999999999999999999
Q ss_pred e-cCCCCeeEEEEecee
Q psy14080 92 A-QPYTTTSHSQNAPGL 107 (113)
Q Consensus 92 ~-~~~~~~s~~~~L~V~ 107 (113)
+ +..+..+..+.|.|+
T Consensus 178 a~n~~g~~~~~~~l~V~ 194 (194)
T 2a38_A 178 ATNSVGRATSTAELLVQ 194 (194)
T ss_dssp EEETTEEEEEEEEEEEC
T ss_pred EEeCCCceEEEEEEEEC
Confidence 9 456777788888774
No 332
>3mtr_A N-CAM-1, NCAM-1, neural cell adhesion molecule 1; immunoglobulin domain, fibronectin type III repeat, CE adhesion; 1.80A {Homo sapiens}
Probab=99.47 E-value=4.3e-13 Score=91.30 Aligned_cols=93 Identities=15% Similarity=0.100 Sum_probs=70.3
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+. ...++.+.+|++++|.|.+.+.+.+.|.|+|. +..+.. ....|+.+.. .....+|.|.+++.+|
T Consensus 19 ~P~~~--~p~~~~~~~G~~v~l~C~~~g~p~p~i~W~~~--g~~l~~-----~~~~~~~~~~--~~~~~~L~i~~~~~~d 87 (215)
T 3mtr_A 19 APKLQ--GPVAVYTWEGNQVNITCEVFAYPSATISWFRD--GQLLPS-----SNYSNIKIYN--TPSASYLEVTPDSEND 87 (215)
T ss_dssp EEEEE--CCSEEEECTTCCEEEEEEEEEESCCEEEEEET--TEESSC-----SSSCSEEEEE--ETTEEEEEECCCSGGG
T ss_pred CCccc--CCceEEEECCCCEEEEEEEeecCCCEEEEEEC--CeECCC-----CCCccEEEec--CCCeeEEEEecCChhh
Confidence 44553 44568899999999999999999899999984 333321 1236777763 2357799999999999
Q ss_pred CEEEEEeec-CCCCeeEEEEeceec
Q psy14080 85 NGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
+|.|.|.+. ..+..+..+.|.|.+
T Consensus 88 ~G~Y~C~a~n~~g~~~~~~~l~v~~ 112 (215)
T 3mtr_A 88 FGNYNCTAVNRIGQESLEFILVQAD 112 (215)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEECC
T ss_pred CeEEEEEEEECCCceEEEEEEEECC
Confidence 999999994 556777778888764
No 333
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.47 E-value=7.6e-13 Score=93.61 Aligned_cols=80 Identities=15% Similarity=0.101 Sum_probs=63.3
Q ss_pred EEEecCCcEEEEEEEccCCCC-EEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-c
Q psy14080 16 STGFLAVFSYSDKTVRDIVKV-RVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA-Q 93 (113)
Q Consensus 16 ~tv~~G~~a~L~C~v~~~~~~-~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-~ 93 (113)
..+.+|+++.|.|.+.+.+.+ .+.|+|. +..+. .++|+.+. .+..+|.|.+++.+|+|.|.|.+ +
T Consensus 231 ~~v~~G~~~~l~C~~~~~p~~~~v~W~~~--g~~~~-------~~~~~~~~----~~~~~L~I~~v~~~d~G~Y~C~a~N 297 (312)
T 2y23_A 231 WEVTGECNVLLKCKVANIKKETHIVWYKD--EREIS-------VDEKHDFK----DGICTLLITEFSKKDAGIYEVILKD 297 (312)
T ss_dssp EEEETTTEEEEEEEEESCCSSCEEEEEET--TEEEE-------EECCC--------CEEEEEECSCSGGGCEEEEEEEES
T ss_pred EEEeCCCEEEEEEEEcCCCCCCEEEEeeC--CEECC-------CCCcEEEE----CCEEEEEECcCCHHHCEEEEEEEEc
Confidence 688999999999999998877 9999983 33332 24566654 24679999999999999999999 5
Q ss_pred CCCCeeEEEEeceec
Q psy14080 94 PYTTTSHSQNAPGLG 108 (113)
Q Consensus 94 ~~~~~s~~~~L~V~g 108 (113)
..+..+..+.|.|+|
T Consensus 298 ~~G~~~~~~~l~i~~ 312 (312)
T 2y23_A 298 DRGKDKSRLKLVDEA 312 (312)
T ss_dssp TTCCEEEEEEECSCC
T ss_pred CCCceeeeeEEEecC
Confidence 668888899998875
No 334
>3rbs_A Myomesin-1; immunoglobulin C-SET domain, contractIle protein; 1.85A {Homo sapiens}
Probab=99.46 E-value=7.4e-13 Score=90.95 Aligned_cols=82 Identities=11% Similarity=0.064 Sum_probs=61.5
Q ss_pred cceEEEecCCcEEEEEEEcc-CCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 13 GQISTGFLAVFSYSDKTVRD-IVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~-~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
+.++.+.+|+++.|.|.+.. .+.+.|.|||. +..+. .++|+.+..+...+..+|.|.+++.+|+|.|+|.
T Consensus 9 ~~~~~v~eg~~v~l~c~~~~~~P~p~i~W~kn--g~~l~-------~~~~~~~~~~~~~g~~~L~I~~v~~~D~G~Y~C~ 79 (207)
T 3rbs_A 9 ELAVEILEKGQVRFWMQAEKLSGNAKVNYIFN--EKEIF-------EGPKYKMHIDRNTGIIEMFMEKLQDEDEGTYTFQ 79 (207)
T ss_dssp EEEEEECGGGCEEEEEECSCCCSCCEEEEEET--TEEEC-------SSSSCEEEECTTTCEEEEEESCCCGGGCEEEEEE
T ss_pred CCceEEEeCCeEEEEEEEecCCCCCEEEEEEC--CEECc-------cCCCEEEEEeCCCCEEEEEECCCChhhCEEEEEE
Confidence 34688999999999999974 58899999983 44432 4567777654445677999999999999999999
Q ss_pred ecCCCCeeEEEEe
Q psy14080 92 AQPYTTTSHSQNA 104 (113)
Q Consensus 92 ~~~~~~~s~~~~L 104 (113)
+.. +..+....+
T Consensus 80 a~N-g~a~~~~~~ 91 (207)
T 3rbs_A 80 LQD-GKATNHSTV 91 (207)
T ss_dssp EEE-TTEEEEEEE
T ss_pred EEC-CCeEEEEEE
Confidence 865 444433443
No 335
>2if7_A SLAM family member 6; NTB-A, homophilic receptor, immune system; 3.00A {Homo sapiens}
Probab=99.46 E-value=1.1e-13 Score=93.78 Aligned_cols=92 Identities=14% Similarity=0.137 Sum_probs=63.0
Q ss_pred ecceEEEecCCcEEEEEEEcc-CCCCEEEEEecCCCeEEE--ecce----EEcCC----CCEEEEEeCCCCcEEEEEccC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRD-IVKVRVSWVRRRDWHILT--SGVL----TYTND----ARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~-~~~~~V~W~k~~~~~~l~--~~~~----~~~~~----~R~~~~~~~~~~~~~L~I~~v 80 (113)
....+++.+|++|+|+|.+.. .+.+.|.|+|.. ..+.. .+.. ....+ +|+.+. .+++|+|+++
T Consensus 4 ~p~~v~~~~G~~v~L~C~~~~~~~~~~v~W~~~~-~~i~~~~~~~~~~~~~~~~~~~~~~R~~~~-----~~~sL~I~~v 77 (193)
T 2if7_A 4 TPLMVNGILGESVTLPLEFPAGEKVNFITWLFNE-TSLAFIVPHETKSPEIHVTNPKQGKRLNFT-----QSYSLQLSNL 77 (193)
T ss_dssp CCEEEEEETTSCEEECCCCCCCSCCCEEEEEETT-EEEEEEECCSSSCCEEEECCHHHHTTEEEC-----TTCCEEECSC
T ss_pred CCeEEEEEecCeEEEeccCCCcccccEEEEEECC-EEEEEEecccCCCCceeecCccccccEEEC-----CCeEEEECCC
Confidence 345678889999999999975 345689999863 22211 1110 00112 477664 3689999999
Q ss_pred CCCCCEEEEEeecCC-CCeeEEEEeceecc
Q psy14080 81 QKRDNGTYECQAQPY-TTTSHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~-~~~s~~~~L~V~g~ 109 (113)
+.+|+|.|.|.+... ......+.|.|.+.
T Consensus 78 ~~~D~G~Y~C~~~~~~~~~~~~~~L~V~~~ 107 (193)
T 2if7_A 78 KMEDTGSYRAQISTKTSAKLSSYTLRILRQ 107 (193)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred CcccCceEEEEEEecCCCeEEEEEEEEEcc
Confidence 999999999999654 34456788888653
No 336
>2wng_A Tyrosine-protein phosphatase non-receptor type substrate 1; signal regulatory protein alpha, immunoglobulin superfamily, phosphoprotein; HET: NAG; 2.49A {Homo sapiens}
Probab=99.46 E-value=1.2e-13 Score=99.19 Aligned_cols=99 Identities=12% Similarity=0.116 Sum_probs=67.7
Q ss_pred eeEeecceEEEecCCcEEEEEEEccC-CCCEEEEEecCCC--eEEEecceEEcCCCCEEEEEeC---CCCcEEEEEccCC
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDW--HILTSGVLTYTNDARFQVIHTD---GSDDWNLQIKFLQ 81 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~--~~l~~~~~~~~~~~R~~~~~~~---~~~~~~L~I~~v~ 81 (113)
.++....++++.+|++++|.|.+.+. +.+.|.|||.... ..+.... ....+|+....+. ....++|.|.+++
T Consensus 5 ~v~~~p~~~~v~~G~~v~L~C~~~~~~p~~~v~W~k~~~~~~~~i~~~~--~~~~~r~~~~~~~~~~~~~~~~L~I~~v~ 82 (327)
T 2wng_A 5 QVIQPDKSVSVAAGESAILHCTVTSLIPVGPIQWFRGAGPARELIYNQK--EGHFPRVTTVSESTKRENMDFSISISNIT 82 (327)
T ss_dssp CEECCCSEEEEETTSCEEECCEESCCCSCCCEEEEESCSTTCEEEEETT--SSCCTTEEECC---CTTCCBCCEEECSCC
T ss_pred EEEcCCCceEEecCCcEEEEEEccCcCCCceEEEEECCCCCceEEEEcC--CCCcceeeeecccccccCceeEEEEccCc
Confidence 34556778999999999999999987 7789999996532 2222111 0124577764221 2467799999999
Q ss_pred CCCCEEEEEeecCC-CC-----eeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPY-TT-----TSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~-~~-----~s~~~~L~V~g 108 (113)
.+|+|.|+|.+... +. .+..+.|.|..
T Consensus 83 ~~D~G~Y~C~a~n~~~~~~~~~~~~~~~l~V~~ 115 (327)
T 2wng_A 83 PADAGTYYCVKFRKGSPDTEFKSGAGTELSVRA 115 (327)
T ss_dssp GGGCEEEEEEEEESSTTCEEEEECCCEEEEEEB
T ss_pred cccCeEEEEEeecCCCcceeEeecCcEEEEEEe
Confidence 99999999999543 22 12345677754
No 337
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.46 E-value=7.2e-13 Score=93.76 Aligned_cols=95 Identities=12% Similarity=0.022 Sum_probs=71.1
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.++.. ..++++.+|++++|.|.+.+.+.+.|.|+|.. ..+. ..+.|+.+... .++..+|.|.+++.+
T Consensus 3 ~~P~~~~~-p~~~~v~~G~~v~l~C~~~g~p~~~v~W~~~~--~~~~------~~~~~~~~~~~-~~~~~~L~i~~v~~~ 72 (305)
T 2nzi_A 3 MAPHFKEE-LRNLNVRYQSNATLVCKVTGHPKPIVKWYRQG--KEII------ADGLKYRIQEF-KGGYHQLIIASVTDD 72 (305)
T ss_dssp CCCEEEEC-CCCEEECTTCCEEEEEEEECSSCCEEEEEETT--EECC------CCSSSEEEEEE-TTTEEEEEESSCCGG
T ss_pred CCCeeeec-ccceEEeCCCcEEEEEEEeCCCCCeEEEEECC--EEcc------cCCCeEEEEEC-CCCEEEEEEccCChh
Confidence 35555443 45789999999999999998888999999843 2221 13457776532 345679999999999
Q ss_pred CCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
|+|.|.|.+. ..+..+..+.|.|..
T Consensus 73 d~G~Y~C~a~n~~g~~~~~~~l~V~~ 98 (305)
T 2nzi_A 73 DATVYQVRATNQGGSVSGTASLEVEV 98 (305)
T ss_dssp GCSEEEEEEEETTEEEEEEEEEEECE
T ss_pred hCeEEEEEEEcCCCCccceEEEEEec
Confidence 9999999994 455667778888764
No 338
>2j8h_A Titin, connectin; cardiomyopathy, nuclear protein, serine/threonine-protein KI LIMB-girdle muscular dystrophy, phosphorylation; 1.99A {Homo sapiens} PDB: 2j8o_A 2ill_A
Probab=99.46 E-value=4.6e-13 Score=89.33 Aligned_cols=84 Identities=12% Similarity=0.174 Sum_probs=67.4
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEcc-CCCCCCEEEEEee
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKF-LQKRDNGTYECQA 92 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~~ 92 (113)
..+.+.+|+++.|.|.+.+.+.+.+.|+|.. ..+ ..+.|+.+.. .....+|.|.+ ++.+|+|.|+|.+
T Consensus 112 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~-------~~~~~~~~~~--~~~~~~L~i~~~~~~~d~G~Y~C~a 180 (197)
T 2j8h_A 112 GAVHALRGEVVSIKIPFSGKPDPVITWQKGQ--DLI-------DNNGHYQVIV--TRSFTSLVFPNGVERKDAGFYVVCA 180 (197)
T ss_dssp EEEEEETTCCCEEEEEEEEESCCEEEEEESS--CEE-------CSSSSCEEEE--CSSEEEEECTTCCCGGGCEEEEEEE
T ss_pred CeEEEeCCCEEEEEEEEEecCCCcEEEEECC--EEe-------ecCCCEEEEE--cCCceEEEEeCCCCcccCEeEEEEE
Confidence 4567889999999999999888999999843 222 2466887753 34577999999 9999999999999
Q ss_pred -cCCCCeeEEEEeceec
Q psy14080 93 -QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 93 -~~~~~~s~~~~L~V~g 108 (113)
+..+..+..+.|.|+.
T Consensus 181 ~N~~g~~~~~~~l~V~d 197 (197)
T 2j8h_A 181 KNRFGIDQKTVELDVAD 197 (197)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EeCCCcEeEEEEEEEeC
Confidence 4567778889998863
No 339
>3bqu_C 3H6 FAB light chain; beta sheet, immune system; 3.00A {Mus musculus}
Probab=99.46 E-value=1.6e-14 Score=99.23 Aligned_cols=83 Identities=14% Similarity=0.108 Sum_probs=48.3
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
++.+..+++.+|++|+|+|.+.+.+.+.|.|||+.. ...+....... ...+||.+.. .+++++|+|.+++.+|
T Consensus 27 ~~~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D 104 (233)
T 3bqu_C 27 TQSPASLSMSIGEKVTIRCITSTDIDDDMNWYQQKPGEPPRLLISDGNTLRPGVPSRFSSSG--YGTDFVFTIENMLSED 104 (233)
T ss_dssp EEECSBC-------CCEEEEEEEEESSCEEEEEECTTSCCEEEECTTSCBCTTSCTTCCCCE--EEEEEEEC-----CCC
T ss_pred EEcCCeEEEecCCCEEEEEecCCcCCCeEEEEEECCCCCcEEEEEcCCccCCCCCccEEeec--cCCEEEEEECCCCHHH
Confidence 444667889999999999999887667899999763 22332211111 1246776542 2356799999999999
Q ss_pred CEEEEEeecC
Q psy14080 85 NGTYECQAQP 94 (113)
Q Consensus 85 ~G~Y~C~~~~ 94 (113)
+|.|+|.+..
T Consensus 105 ~G~Y~C~~~~ 114 (233)
T 3bqu_C 105 VADYYCLQSD 114 (233)
T ss_dssp CSEEEEEECS
T ss_pred CEEEEEEEec
Confidence 9999999954
No 340
>2ens_A Advanced glycosylation END product-specific receptor; beta-sandwich, C2-SET, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=4.5e-14 Score=85.74 Aligned_cols=80 Identities=15% Similarity=0.073 Sum_probs=59.9
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTY 88 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (113)
++......++.+|++++|.|.+.+.+.+.+.|||.. . .+. ...+.+|.|.+++.+|+|.|
T Consensus 13 i~~~p~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~~-~-~~~------------------~~~~~~L~i~~v~~~d~G~Y 72 (96)
T 2ens_A 13 LVVEPEGGAVAPGGTVTLTCEVPAQPSPQIHWMKDG-V-PLP------------------LPPSPVLILPEIGPQDQGTY 72 (96)
T ss_dssp CEEESTTSEECTTCEEEEECCCSSCSSCCCCCEESS-S-BCS------------------SCCCSEEEEESCCTTTCEEE
T ss_pred EEECCCCCEEcCCCeEEEEEEEccCCCCEEEEEECC-E-ECc------------------CCCCCEEEECCCCcccCEEE
Confidence 344555678999999999999998888899999832 1 110 01245899999999999999
Q ss_pred EEeecC-CC--CeeEEEEeceec
Q psy14080 89 ECQAQP-YT--TTSHSQNAPGLG 108 (113)
Q Consensus 89 ~C~~~~-~~--~~s~~~~L~V~g 108 (113)
+|.+.. .. ..+..+.|.|.+
T Consensus 73 ~C~a~n~~~~~~~s~~~~v~V~~ 95 (96)
T 2ens_A 73 SCVATHSSHGPQESRAVSISIIE 95 (96)
T ss_dssp ECEECCSSCCCEECCCEEEEECC
T ss_pred EEEEEeCCCCcEEEEEEEEEEeC
Confidence 999965 33 356677887765
No 341
>1nfd_E H57 FAB; complex (immunoreceptor-immunoglobulin), complex (immunorece immunoglobulin) complex; HET: NAG NDG; 2.80A {Mus musculus} SCOP: b.1.1.1 b.1.1.2
Probab=99.45 E-value=1.1e-13 Score=93.87 Aligned_cols=79 Identities=14% Similarity=0.060 Sum_probs=59.7
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
...+++.+|++|+|.|.+.+.+.+.|.|||+..+ ..+....... ..++||.+.. ..+.++|+|.+++.+|+|.
T Consensus 6 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~G~ 83 (212)
T 1nfd_E 6 PSSASVTVGETVKITCSGDQLPKNFAYWFQQKSDKNILLLIYMDNKRPSGIPERFSGST--SGTTATLTISGAQPEDEAA 83 (212)
T ss_dssp CSEEEEETTSCCCEEEEETTGGGSCCEEEEECTTCCEEEEEBTTTBCCTTSCTTEEEEE--ETTEEEEEETTCCGGGCSE
T ss_pred CCeEEEeCCCcEEEEEecCCCCCCeEEEEEECCCCCcEEEEEeccccCCCccccEEEEe--eCCEEEEEECcCCcccCEE
Confidence 6778999999999999998776678999997632 2222211111 1257998864 3567899999999999999
Q ss_pred EEEeec
Q psy14080 88 YECQAQ 93 (113)
Q Consensus 88 Y~C~~~ 93 (113)
|+|.+.
T Consensus 84 Y~C~~~ 89 (212)
T 1nfd_E 84 YYCLSS 89 (212)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 999996
No 342
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.45 E-value=2.9e-13 Score=96.71 Aligned_cols=101 Identities=15% Similarity=0.207 Sum_probs=69.6
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCCCC-----EEEEEecCCC-e--EEEec-ceEEcCCCCEEEEEe---CCCCcEEE
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIVKV-----RVSWVRRRDW-H--ILTSG-VLTYTNDARFQVIHT---DGSDDWNL 75 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~~~-----~V~W~k~~~~-~--~l~~~-~~~~~~~~R~~~~~~---~~~~~~~L 75 (113)
|..+.+.++++.+|++|+|+|.+.+.+.+ .|.|+|.... . ++... ...+....|+..... ...++++|
T Consensus 2 Vvv~~P~~v~~~~G~~v~L~C~v~~~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL 81 (313)
T 4fqp_A 2 VVVQAPTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRNASL 81 (313)
T ss_dssp CEEECCSEECCBTTSCEEECCEEECCTTSCCCCCEEEEEETTSSSCSEEEETTTEEEESSTTTEEESSCCTTSCCCBCCE
T ss_pred eEEcCCCEEEEecCCCEEEEEEEECCCCCccceEEEEEEECCCCcceEEEecCCCceeccCcceEEEeeccCCcccceEE
Confidence 45566778889999999999999876543 4999997532 1 22111 123445677776421 12356799
Q ss_pred EEccCCCCCCEEEEEeecCC--CCeeEEEEeceec
Q psy14080 76 QIKFLQKRDNGTYECQAQPY--TTTSHSQNAPGLG 108 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~~~~--~~~s~~~~L~V~g 108 (113)
+|.+++.+|+|.|+|.+... ...+..+.|.|..
T Consensus 82 ~I~~v~~~D~G~Y~C~v~~~~~~~~~~~~~l~v~~ 116 (313)
T 4fqp_A 82 RMFGLRVEDEGNYTCLFVTFPQGSRSVDIWLRVLA 116 (313)
T ss_dssp EECSCCGGGCEEEEEEEECSSSCEEEEEEEECCBB
T ss_pred EECcCChhhCEEEEEEEeeccCcceeeeeeeeecc
Confidence 99999999999999998543 4556677777654
No 343
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.45 E-value=2e-13 Score=91.37 Aligned_cols=97 Identities=11% Similarity=-0.006 Sum_probs=69.1
Q ss_pred eeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEE-ecceEE--cCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 7 GILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILT-SGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 7 ~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~-~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
..+......+++.+|+++.|.|.+.+.+.+.|.|+|........ ...... ....|+.+. ..+|.|.+++.+
T Consensus 5 ~~i~~~~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~r~~~~------~~~L~i~~~~~~ 78 (209)
T 1nbq_A 5 VTVHSSEPEVRIPENNPVKLSCAYSGFSSPRVEWKFDQGDTTRLVCYNNKITASYEDRVTFL------PTGITFKSVTRE 78 (209)
T ss_dssp CEEECSCSBCCEETTCCCEEECEEESCSSEEEEEEEEETTEEEESEETTEECTTTTTTCEEE------TTEEECSCCCTT
T ss_pred EEEEcCCCceEEEcCCCEEEEEEEeCCCCcEEEEEEcCCceeEEEEecCccCccccCceEee------ccEEEEeeCCHH
Confidence 34455667789999999999999998888899999976442111 111111 234677765 379999999999
Q ss_pred CCEEEEEeecCC---CCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQPY---TTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~~~---~~~s~~~~L~V~g~ 109 (113)
|+|.|.|.+... ...+..+.|.|...
T Consensus 79 d~G~Y~C~~~~~~g~~~~~~~~~l~V~~~ 107 (209)
T 1nbq_A 79 DTGTYTCMVSEEGGNSYGEVKVKLIVLVP 107 (209)
T ss_dssp SCSEEEEEEEETTSSCEECCEEECCEEBC
T ss_pred HCcEEEEEEecCCCCccceEEEEEEEecC
Confidence 999999999542 23456777877653
No 344
>2j6e_L IGM, FAB light chain; autoimmune complex human IGM rheumatoid factor IGG1-FC, immunoglobulin C region, membrane, glycoprotein, transmembrane; HET: NAG FUL BMA MAN NDG GAL; 3.0A {Homo sapiens} SCOP: b.1.1.1 b.1.1.2
Probab=99.44 E-value=1e-13 Score=95.07 Aligned_cols=93 Identities=14% Similarity=0.046 Sum_probs=64.7
Q ss_pred cceEEEecCCcEEEEEEEccCC-CC-EEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV-KV-RVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~-~~-~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
+..+++.+|++|+|+|.+.+.+ .+ .|.|||+.. ...+....... ...+||.+.. ..+.++|+|.+++.+|+
T Consensus 26 p~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~v~~~D~ 103 (234)
T 2j6e_L 26 PPSASGTPGQRVTISCSGSSSNIGSNYVYWYQQLPGTAPKLLIYRNNQRPSGVPDRFSGSK--SGTSASLAISGLRSEDE 103 (234)
T ss_dssp CSCCCBCTTCEEEEEEECCTTTTTTSCCEEEEECSSSCCEEEEBTTTBCCSSSCTTEEEEE--ETTEEEEEEESCCSTTC
T ss_pred CCcEEeeCCCcEEEEEEecCCCCCCCeEEEEEecCCCCcEEEEECccccCCCccccEEEEe--cCCeEEEEECCCCHHHC
Confidence 5677899999999999998753 33 699999753 22333221111 1247998764 34678999999999999
Q ss_pred EEEEEeecCCCC----eeEEEEecee
Q psy14080 86 GTYECQAQPYTT----TSHSQNAPGL 107 (113)
Q Consensus 86 G~Y~C~~~~~~~----~s~~~~L~V~ 107 (113)
|.|+|.+..... ....+.|.|.
T Consensus 104 G~Y~C~~~~~~~~~~~~~~~~~l~V~ 129 (234)
T 2j6e_L 104 ADYYCATWDDSLSAVIFGGGTKLTVL 129 (234)
T ss_dssp SEEEEEEEETTTTEEEECCCBCCCBC
T ss_pred EEEEEEEEcCCcceeEecCCEEEEEe
Confidence 999999964332 2234566664
No 345
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.44 E-value=4.1e-13 Score=92.45 Aligned_cols=95 Identities=14% Similarity=0.079 Sum_probs=66.5
Q ss_pred ecceEEEecCCcEEEEEEEcc---CCCCEEEEEecCCC--e-EEEecce-----------------E-EcCCCCEEEEEe
Q psy14080 12 FGQISTGFLAVFSYSDKTVRD---IVKVRVSWVRRRDW--H-ILTSGVL-----------------T-YTNDARFQVIHT 67 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~---~~~~~V~W~k~~~~--~-~l~~~~~-----------------~-~~~~~R~~~~~~ 67 (113)
....+++.+|++|+|+|.+.+ .+.+.|.|+|.... . ++..+.. . ....+|+.+..
T Consensus 8 ~~~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~- 86 (250)
T 2fbo_J 8 THTEVEVHAGGTVELPCSYQLANDTQPPVISWLKGASPDRSTKVFKGNYNWQGEGLGFVESDSYKESFGDFLGRASVAN- 86 (250)
T ss_dssp SCSEEEECTTSCEEECCEEEECSCCSCCEEEEEEEEETTEEEEEEEEEECCCBTTBCCCTTSEEEEECGGGTTTEECSC-
T ss_pred CCCceEEecCCeEEEEEEeEcCCCCCceEEEEEeCCCCCccEEEEeeccccccccccccccccccccCCCcCceEEecc-
Confidence 345789999999999999987 67789999997632 1 2222110 0 11246776542
Q ss_pred CCCCcEEEEEccCCCCCCEEEEEeecCCCC------eeEEEEeceecc
Q psy14080 68 DGSDDWNLQIKFLQKRDNGTYECQAQPYTT------TSHSQNAPGLGD 109 (113)
Q Consensus 68 ~~~~~~~L~I~~v~~~D~G~Y~C~~~~~~~------~s~~~~L~V~g~ 109 (113)
.++++|.|.+++.+|+|.|.|.+..... .+..+.|.|.+.
T Consensus 87 --~~~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~~~~~l~V~~~ 132 (250)
T 2fbo_J 87 --LAAPTLRLTHVHPQDGGRYWCQVAQWSIRTEFGLDAKSVVLKVTGH 132 (250)
T ss_dssp --TTSCCEEECSCCGGGCEEEEEEEECTTCCSGGGEEEEEEEEEETTT
T ss_pred --CCcceEEEeeCChhhCeEEEEEeccCccCCcccccceeEEEEEecc
Confidence 3567999999999999999999964322 255788888764
No 346
>1hng_A CD2; T lymphocyte adhesion glycoprotein; 2.80A {Rattus rattus} SCOP: b.1.1.1 b.1.1.3
Probab=99.44 E-value=2.1e-13 Score=91.30 Aligned_cols=89 Identities=18% Similarity=0.167 Sum_probs=62.1
Q ss_pred eEEEecCCcEEEEEE-Ecc-CCCCEEEEEecCCCeEEEe--cceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEE
Q psy14080 15 ISTGFLAVFSYSDKT-VRD-IVKVRVSWVRRRDWHILTS--GVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~-v~~-~~~~~V~W~k~~~~~~l~~--~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (113)
.+.+.+|++++|+|. +.. .+.+.|.|+|.. ..+... +...+..++|+.+. .+.+|.|.+++.+|+|.|.|
T Consensus 5 ~v~~~~G~~v~L~c~~~~~~~~~~~i~W~k~~-~~i~~~~~~~~~~~~~~r~~~~-----~~gsL~I~~v~~~D~G~Y~C 78 (176)
T 1hng_A 5 TVWGALGHGINLNIPNFQMTDDIDEVRWERGS-TLVAEFKRKMKPFLKSGAFEIL-----ANGDLKIKNLTRDDSGTYNV 78 (176)
T ss_dssp EEEEETTSCEEECCTTCCCCTTEEEEEEEETT-EEEEEEETTSCCEESSTTEEEC-----TTSCEEESSCCGGGCEEEEE
T ss_pred EEEEEcCCcEEEcCCCCCcccccccEEEEeCC-ceeEEEcCCCeecCCCCeEEEC-----CCCcEEEcccccccCEEEEE
Confidence 477899999999994 331 345689999853 333221 11223346898874 23469999999999999999
Q ss_pred eec-CCCCe--eEEEEeceecc
Q psy14080 91 QAQ-PYTTT--SHSQNAPGLGD 109 (113)
Q Consensus 91 ~~~-~~~~~--s~~~~L~V~g~ 109 (113)
.+. ..+.. +..+.|.|...
T Consensus 79 ~~~n~~g~~~~~~~~~l~V~~~ 100 (176)
T 1hng_A 79 TVYSTNGTRILNKALDLRILEM 100 (176)
T ss_dssp EEEETTCCEEEEEEEEEEEECC
T ss_pred EEEeCCCCEEEEEEEEEEEeCC
Confidence 995 44554 67788888653
No 347
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.44 E-value=7.3e-13 Score=87.45 Aligned_cols=90 Identities=16% Similarity=0.099 Sum_probs=64.0
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
.....++++.+|++++|.|.+.+.+.+.+.|+|. +..+. ...|+.+.........+|.|.+++.+|+|.|.
T Consensus 6 ~~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~k~--~~~~~-------~~~~~~~~~~~~~~~~~L~i~~~~~~d~G~Y~ 76 (182)
T 1rhf_A 6 MGAPVKLTVSQGQPVKLNCSVEGMEEPDIQWVKD--GAVVQ-------NLDQLYIPVSEQHWIGFLSLKSVERSDAGRYW 76 (182)
T ss_dssp -CCCEEEEEETTCCEEEEEEEESCSSCCEEEEET--TEECC-------SSEEEEEEEETTEEEEEEEESSCCGGGCEEEE
T ss_pred EeCCcceEEeCCCcEEEEEEEeCCCCCeEEEEEC--CeecC-------CCCceEEEecCCCceEEEEEeecCcccCeEEE
Confidence 3445668899999999999999888889999984 32221 22344443322223579999999999999999
Q ss_pred EeecCC-C-CeeEEEEeceec
Q psy14080 90 CQAQPY-T-TTSHSQNAPGLG 108 (113)
Q Consensus 90 C~~~~~-~-~~s~~~~L~V~g 108 (113)
|.+... + ..+..+.|.|.+
T Consensus 77 C~~~~~~~~~~~~~~~l~V~~ 97 (182)
T 1rhf_A 77 CQVEDGGETEISQPVWLTVEG 97 (182)
T ss_dssp EEESSCTTCEECCCEEEEEEC
T ss_pred EEEEcCCCcEEEEEEEEEEec
Confidence 999653 3 345667777764
No 348
>1wwc_A Protein (NT-3 growth factor receptor TRKC); TRK receptor, receptor tyrosine kinase, 3D-domain swapping, transferase; 1.90A {Homo sapiens} SCOP: b.1.1.4
Probab=99.43 E-value=1.2e-12 Score=82.08 Aligned_cols=94 Identities=17% Similarity=0.145 Sum_probs=64.1
Q ss_pred cCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeC--CCCcEEEEEccC
Q psy14080 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTD--GSDDWNLQIKFL 80 (113)
Q Consensus 3 ~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~--~~~~~~L~I~~v 80 (113)
..|+.+....... ..+.+.|.|.+.+.+.+.+.|+|. +..+. .+.|+.+.... .....+|.|.++
T Consensus 6 ~~pP~i~~~~~~~----~~~~~~l~C~~~g~P~p~i~W~k~--g~~l~-------~~~~~~~~~~~~~~~~~~~L~i~~~ 72 (118)
T 1wwc_A 6 YYPPRVVSLEEPE----LRLEHCIEFVVRGNPPPTLHWLHN--GQPLR-------ESKIIHVEYYQEGEISEGCLLFNKP 72 (118)
T ss_dssp CCCCCCCCCCCCC----CCCEEEEEEEEECSSCCEEEEEET--TEECC-------CSSSEEEEEEECSSEEEEEEEEESC
T ss_pred ecCCceeccCCCe----eccceEEEEEeeeeCCCeEEEEEC--CEECC-------CCCceeEEEeccCccccEEEEECCC
Confidence 3466555442221 236788999999999999999984 33322 23344433211 113568999999
Q ss_pred CCCCCEEEEEee-cCCCCeeEEEEeceecc
Q psy14080 81 QKRDNGTYECQA-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~-~~~~~~s~~~~L~V~g~ 109 (113)
+.+|+|.|.|.+ +..+..+..+.|.|.+.
T Consensus 73 ~~~d~G~Y~C~a~N~~G~~~~~~~l~v~~~ 102 (118)
T 1wwc_A 73 THYNNGNYTLIAKNPLGTANQTINGHFLKE 102 (118)
T ss_dssp CGGGCEEEEEEEEETTEEEEEEEEECCSCC
T ss_pred ChhcCEEEEEEEECCCCeEeeEEEEEEccC
Confidence 999999999999 55677888889877654
No 349
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.43 E-value=2e-12 Score=88.24 Aligned_cols=98 Identities=14% Similarity=0.070 Sum_probs=62.5
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCCe-EEEecceEEcCCC--CEEEEEeCCCCcEEEEEccCCC
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDWH-ILTSGVLTYTNDA--RFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~~-~l~~~~~~~~~~~--R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
+.......+++.+|++++|.|.+.+.+ ...+.|+|..... ............. .... ...+|.|.+++.
T Consensus 107 ~~~~~~~~~~v~~G~~v~L~C~~~g~p~~~~~i~W~~~g~~~~~~~~~~~~~~~~~~~~~~~------~~~~L~I~~v~~ 180 (213)
T 2x1w_L 107 VVLSPSHGIELSVGEKLVLNCTARTELNVGIDFNWEYPSSKHQHKKLVNRDLKTQSGSEMKK------FLSTLTIDGVTR 180 (213)
T ss_dssp EEEESCSCEEEETTCCEEEEEEEEECTTBCCEEEEECSCSSCCSEEEEEEEECCCSSCSCEE------EEEEEEESSCCG
T ss_pred eEEcCCCCeEEcCCCCEEEEEEEECCCCCceEEEEEecCCccceEEEeccccccccCcccee------eeEEEEECCCCc
Confidence 333444456899999999999999754 3479998854321 1100000000000 0011 245899999999
Q ss_pred CCCEEEEEeec-CCCCeeEEEEeceecccc
Q psy14080 83 RDNGTYECQAQ-PYTTTSHSQNAPGLGDLL 111 (113)
Q Consensus 83 ~D~G~Y~C~~~-~~~~~s~~~~L~V~g~~~ 111 (113)
+|+|.|+|.+. ..+..+..+.|.|.+.-.
T Consensus 181 ~D~G~Y~C~a~N~~g~~~~~~~l~V~~~p~ 210 (213)
T 2x1w_L 181 SDQGLYTCAASSGLMTKKNSTFVRVHEDPI 210 (213)
T ss_dssp GGCEEEEEEEECSSCEEEEEEEEEEEC---
T ss_pred ccCEEEEEEEecCCCcEEEEEEEEEecccc
Confidence 99999999994 557778999999987643
No 350
>1x9q_A SCFV, 4M5.3 anti-fluorescein single chain antibody fragment; VERY high affinity, antibody binding, electrostatics, directed evolution; HET: FLU; 1.50A {Homo sapiens}
Probab=99.43 E-value=9.2e-13 Score=92.86 Aligned_cols=82 Identities=17% Similarity=0.189 Sum_probs=59.2
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eecc------eEE--cCCCCEEEEEeCCCCcEEEEEc
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSGV------LTY--TNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~~------~~~--~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
....++.+|++++|.|.+.+.+ .+.|.|||+..+ ..+ .... ... ..++||.+..+...+.++|.|.
T Consensus 158 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~ 237 (268)
T 1x9q_A 158 TGGGLVQPGGAMKLSCVTSGFTFGHYWMNWVRQSPEKGLEWVAQFRNKPYNYETYYSDSVKGRFTISRDDSKSSVYLQMN 237 (268)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGCEEEEEEEETTTEEEEEEEECCGGGTTCEEECTTTTTTEEEEEEGGGTEEEEEEC
T ss_pred CCceEecCCCcEEEEEEecCccccccEEEEEEeCCCCCcEEEEEEcccccccccccCCccCCeEEEEEeCCCCEEEEEEC
Confidence 3457899999999999998764 378999998532 222 1110 001 1357999875433456899999
Q ss_pred cCCCCCCEEEEEeecC
Q psy14080 79 FLQKRDNGTYECQAQP 94 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~ 94 (113)
+++.+|+|+|+|.+..
T Consensus 238 ~v~~~DsG~Y~C~a~~ 253 (268)
T 1x9q_A 238 NLRVEDTGIYYCTGAS 253 (268)
T ss_dssp SCCGGGCEEEEEEEEE
T ss_pred CCCHHHCEEEEEEEcc
Confidence 9999999999999964
No 351
>2rik_A Titin; I-SET IG fold, poly-IG linear array, structural protein; 1.60A {Oryctolagus cuniculus} PDB: 2rjm_A
Probab=99.42 E-value=3.4e-12 Score=89.47 Aligned_cols=95 Identities=14% Similarity=0.202 Sum_probs=71.4
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.+.........+.+|+++.|.|.+.+.+.+.+.|+|.. ..+ ....++.... .....+|.|.+++.+
T Consensus 97 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~p~~~v~W~~~~--~~~-------~~~~~~~~~~--~~~~~~L~i~~~~~~ 165 (284)
T 2rik_A 97 EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDE--TEI-------QESSKFRMSF--VESVAVLEMYNLSVE 165 (284)
T ss_dssp CCCEEEECCCSEEEEETTCCEEEEEEEESSSCCEEEEEETT--EEC-------CCSSSEEEEE--ETTEEEEEECSCCGG
T ss_pred CCCcccccCCCceEecCCceEEEEEEEeeeCCCEEEEEECC--EEC-------cCCCcEEEEE--cCCEEEEEECCCCcc
Confidence 35555555556677899999999999998888999999843 222 2345665543 235679999999999
Q ss_pred CCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
|+|.|.|.+. ..+..+..+.|.|...
T Consensus 166 d~G~Y~C~a~n~~g~~~~~~~l~V~~~ 192 (284)
T 2rik_A 166 DSGDYTCEAHNAAGSASSSTSLKVKEP 192 (284)
T ss_dssp GCEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred cCEEEEEEEEcCCCceeEEEEEEEecC
Confidence 9999999994 4566777888888753
No 352
>3lcy_A Titin; A-BAND, IG tandem domains, ATP-binding, calmodulin-BI cardiomyopathy, disease mutation, disulfide bond, immunoglo domain, isopeptide bond; 2.50A {Homo sapiens}
Probab=99.42 E-value=1.8e-12 Score=85.95 Aligned_cols=86 Identities=14% Similarity=0.115 Sum_probs=67.8
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCC-CCCCEEEEEe
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQ-KRDNGTYECQ 91 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~-~~D~G~Y~C~ 91 (113)
.....+.+|+++.|.|.+.+.+.+.+.|+|. +..+ ..+.|+.+.. .....+|.|.+++ .+|+|.|+|.
T Consensus 110 ~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~--~~~~-------~~~~~~~~~~--~~~~~~L~i~~~~~~~d~G~Y~C~ 178 (197)
T 3lcy_A 110 KEKYYGAVGSTLRLHVMYIGRPVPAMTWFHG--QKLL-------QNSENITIEN--TEHYTHLVMKNVQRKTHAGKYKVQ 178 (197)
T ss_dssp CSEEEEETTSCEEEEEEEEEESCCEEEEEET--TEEC-------CCCSSEEEEE--CSSEEEEEESSCCHHHHCEEEEEE
T ss_pred CcceeecCCCeEEEEEEEeeeeCCeeEEeEC--CEEC-------CCCCceEEEE--cCCEEEEEEccccchhhCceEEEE
Confidence 3556788999999999999988899999984 3332 2456777653 3345799999999 5999999999
Q ss_pred ec-CCCCeeEEEEeceecc
Q psy14080 92 AQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 92 ~~-~~~~~s~~~~L~V~g~ 109 (113)
+. ..+..+..+.|.|.++
T Consensus 179 a~n~~g~~~~~~~l~V~~k 197 (197)
T 3lcy_A 179 LSNVFGTVDAILDVEIQDK 197 (197)
T ss_dssp EECSSCEEEEEEEEEEECC
T ss_pred EEcCcCceEEEEEEEEecC
Confidence 94 5677888999999864
No 353
>3eow_R Poliovirus receptor; immunoglobulin super family, alternative splicing, cell adhesion, cell membrane, glycoprotein, HOST-virus interaction; 3.50A {Homo sapiens} PDB: 3uro_R 3epc_R* 3epd_R* 3epf_R*
Probab=99.42 E-value=1.6e-13 Score=93.59 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=66.2
Q ss_pred ecceEEEecCCcEEEEEEEcc-CCCC----EEEEEecCCC-eE--EEe-cceEEcCCCCEEEEEe---CCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRD-IVKV----RVSWVRRRDW-HI--LTS-GVLTYTNDARFQVIHT---DGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~-~~~~----~V~W~k~~~~-~~--l~~-~~~~~~~~~R~~~~~~---~~~~~~~L~I~~ 79 (113)
....+++.+|++|+|+|.+.. .+.+ .|.|+|.... .+ ... ....+...+|+.+..+ ...++++|.|.+
T Consensus 5 ~p~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~sL~I~~ 84 (221)
T 3eow_R 5 APTQVPGFLGDSVTLPCYLQVPNMEVTHVSQLTWARHGESGSMAVFHQTQGPSYSESKRLEFVAARLGAELRDASLRMFG 84 (221)
T ss_dssp CCCCCCCCCSSCCEEECCCCCCSSSCCCEEEEEECBSSSCSSCCCEEESSSEEECSCSSCEEESSCSSCCCCCCEEECCC
T ss_pred CCCcEEEEeCCCEEEEeeeccCCCCCccceEEEEEeCCCCceEEEEECCCCCCcCCCCcEEEecccCCCCCCCceEEEcc
Confidence 345567888999999999954 3333 4999997532 11 111 1122333678887631 133578999999
Q ss_pred CCCCCCEEEEEeecC-C-CCeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQP-Y-TTTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~-~-~~~s~~~~L~V~g 108 (113)
++.+|+|.|+|.+.. . +..+..+.|.|.+
T Consensus 85 v~~~D~G~Y~C~~~~~~~~~~~~~~~L~V~~ 115 (221)
T 3eow_R 85 LRVEDEGSYTCLFVTFPQGSRSVDIWLRVLA 115 (221)
T ss_dssp SSCCCCSCBEEEEEESSSCSCEEECCCCCCC
T ss_pred CChHHCeEEEEEEEeCCCCceEEEEEEEEEE
Confidence 999999999999964 2 5567778888875
No 354
>4fa8_A Secreted protein BARF1; immunoglobulin-like domains, 4-helix bundle fold, viral PROT cytokine complex; HET: NAG BMA; 2.20A {Human herpesvirus 4} PDB: 2ch8_A* 3uez_A* 4adf_A* 4adq_A*
Probab=99.42 E-value=3.7e-13 Score=92.56 Aligned_cols=87 Identities=10% Similarity=-0.096 Sum_probs=57.9
Q ss_pred ceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 6 GGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 6 ~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
+.+......+.++.+|++++|.|.+.+.|.+.|.|+|.++..... ...+.|+.+. .++.-..|.|.+++.+|+
T Consensus 106 p~~~~~~~~~~~v~~g~~~~l~C~~~G~P~P~v~W~~~~~~~~~~-----~~~~~r~~~~--~~g~l~il~i~~v~~~D~ 178 (203)
T 4fa8_A 106 PLTLSVHSERSQFPDFSVLTVTCTVNAFPHPHVQWLMPEGVEPAP-----TAANGGVMKE--KDGSLSVAVDLSLPKPWH 178 (203)
T ss_dssp EEEEEEEEEECCSSCSCCEEEEEEEEEESCCEEEECCC-----------------CCEEC--TTSCEEEEEEEEECSSCC
T ss_pred CceeeecceeEEEcCCCEEEEEEEcCCCCCCEEEEEECCeeecCc-----ccccceEEEe--CCCCEEEEEECCCCHHHC
Confidence 344455566678889999999999999999999998854322211 1235677765 233334567789999999
Q ss_pred EEEEEeec-CCCCee
Q psy14080 86 GTYECQAQ-PYTTTS 99 (113)
Q Consensus 86 G~Y~C~~~-~~~~~s 99 (113)
|.|+|.+. ..+...
T Consensus 179 G~YtC~A~N~~G~a~ 193 (203)
T 4fa8_A 179 LPVTCVGKNDKEEAH 193 (203)
T ss_dssp CCEEEEEESSSCEEE
T ss_pred EEEEEEEEcCCCEEE
Confidence 99999995 445544
No 355
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.42 E-value=1.4e-12 Score=87.19 Aligned_cols=83 Identities=17% Similarity=0.182 Sum_probs=57.2
Q ss_pred ecceEEEecCCcEEEEEEEccCCCC---EEEEEecCCC---e-EEEe-cc--eEE--cCCCCEEEEEe-CCCCcEEEEEc
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKV---RVSWVRRRDW---H-ILTS-GV--LTY--TNDARFQVIHT-DGSDDWNLQIK 78 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~---~V~W~k~~~~---~-~l~~-~~--~~~--~~~~R~~~~~~-~~~~~~~L~I~ 78 (113)
.+..+++.+|++|+|+|.+.+.+.+ .|.|+|.+.. . +... .. ... ....|+..... ....+++|.|.
T Consensus 5 ~p~~vtv~~G~~v~L~C~v~~~~~~~~~~V~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~ 84 (218)
T 4frw_A 5 TSDVVTVVLGQDAKLPCFYRGDSGEQVGQVAWARVDAGEGAQELALLHSKYGLHVSPAYEGRVEQPPPPRNPLDGSVLLR 84 (218)
T ss_dssp CCSEEEEETTSCEEECCEECCCTTCEEEEEEEEEECSSSCEEEEEEEETTTEEEECGGGTTTEECCSSCCCTTBCCEEES
T ss_pred CCCeEEEEcCCCEEEEEEEEcCCCCCccEEEEEECCCCCCceeEEEecCCCCeEeCccccceEEEecccccCCeEEEEEe
Confidence 4567899999999999999987654 4899997632 1 1111 11 111 12456665421 23457899999
Q ss_pred cCCCCCCEEEEEeecC
Q psy14080 79 FLQKRDNGTYECQAQP 94 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~~ 94 (113)
+++.+|+|.|+|.+..
T Consensus 85 ~v~~~D~G~Y~C~~~~ 100 (218)
T 4frw_A 85 NAVQADEGEYECRVST 100 (218)
T ss_dssp SCCGGGCEEEEEEEEE
T ss_pred eccHHHCCceeEEEEe
Confidence 9999999999999854
No 356
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.42 E-value=4.3e-13 Score=93.48 Aligned_cols=96 Identities=18% Similarity=0.150 Sum_probs=65.3
Q ss_pred ecceEEEecCCcEEEEEEEc---cCCCCEEEEEecCCC----e-EEEec-ceEE---cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 12 FGQISTGFLAVFSYSDKTVR---DIVKVRVSWVRRRDW----H-ILTSG-VLTY---TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~---~~~~~~V~W~k~~~~----~-~l~~~-~~~~---~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
....+++.+|++++|+|.+. +.+.+.|.|+|.... . ++... .... .-.+|+.+..+...++++|.|.+
T Consensus 11 ~~~~~~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~ 90 (268)
T 3mj6_A 11 SSPQLRVHVGESVLMGCVVQRTEEKHVDRVDWLFSKDKDDASEYVLFYYSNLSVPTGRFQNRSHLVGDTFHNDGSLLLQD 90 (268)
T ss_dssp -CCEEEEETTCCEEECCBCCCSSCCCEEEEEEEEESSSTTCCEEEEEEETTEEEECGGGTTTEEECSCTTTTBCCEEECS
T ss_pred CCCceEEecCCcEEEEEEeecCCCCceEEEEEEEeCCCCCceEEEEEEcCCCcccCccccCceEEeecCCCCEEEEEECC
Confidence 34568899999999999998 555678999997531 1 22211 1111 01367776544455678999999
Q ss_pred CCCCCCEEEEEeecCC-C--CeeEEEEecee
Q psy14080 80 LQKRDNGTYECQAQPY-T--TTSHSQNAPGL 107 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~-~--~~s~~~~L~V~ 107 (113)
++.+|+|.|+|.+... . ..+..+.|.|.
T Consensus 91 v~~~D~G~Y~C~~~~~~~~~~~~~~~~l~V~ 121 (268)
T 3mj6_A 91 VQKADEGIYTCEIRLKNESMVMKKPVELWVL 121 (268)
T ss_dssp CCGGGCEEEEEEEEETTCCCEEEEEEEEEEE
T ss_pred CCHhHCEEEEEEEEecCCcceEEEEEEEEEe
Confidence 9999999999999532 2 34566777664
No 357
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.42 E-value=1.5e-12 Score=86.31 Aligned_cols=91 Identities=16% Similarity=0.185 Sum_probs=66.7
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+ +.....+++.+|++++|.|.+.+.+.+.+.|+|.. ..+. ..+.|+.+.. +..+|.|.+++.+|
T Consensus 7 ~P~i-~~~~~~~~~~~G~~v~l~C~~~~~p~~~i~W~~~~--~~~~------~~~~~~~~~~----~~~~L~i~~~~~~d 73 (192)
T 2iep_A 7 APVI-TTPLETVDALVEEVATFMCAVESYPQPEISWTRNK--ILIK------LFDTRYSIRE----NGQLLTILSVEDSD 73 (192)
T ss_dssp EEEE-SSCCCEEEEETTSCEEEECCEEEESCCEEEEEETT--EECC------TTCTTEEEEG----GGTEEEESSCCGGG
T ss_pred Ccee-ecCccceeeeCCCcEEEEeeCCCCCCCeEEEEECC--EEcc------ccCccEEEcC----CccEEEEcCCCccc
Confidence 4443 34456788999999999999998888899999842 2221 2367888763 34489999999999
Q ss_pred CEEEEEeecCC-CC-eeEEEEeceec
Q psy14080 85 NGTYECQAQPY-TT-TSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~-~~-~s~~~~L~V~g 108 (113)
+|.|.|.+... +. .+..+.|.|..
T Consensus 74 ~G~Y~C~~~~~~~~~~~~~~~l~v~~ 99 (192)
T 2iep_A 74 DGIYCCTANNGVGGAVESCGALQVKM 99 (192)
T ss_dssp CEEEEEEEECSSSCCEEEEEEEEEEE
T ss_pred CeEEEEEEEcCCCceeEeEEEEEEEe
Confidence 99999999543 33 45566776654
No 358
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.41 E-value=2.5e-12 Score=90.23 Aligned_cols=90 Identities=17% Similarity=0.171 Sum_probs=66.9
Q ss_pred eecceEEEecCCcEEEEEEEccCC-CCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
..+++..+.+|++++|.|.+.+.+ .+.|.|+|.++..+. ....|+.+... +....+|.|.+++.+|+|.|+
T Consensus 7 ~~p~~~~v~~G~~v~l~C~~~~~~~~~~i~W~~~~g~~~~-------~~~~~~~~~~~-~~~~~~L~i~~~~~~D~G~Y~ 78 (291)
T 1qz1_A 7 IVPSQGEISVGESKFFLCQVAGDAKDKDISWFSPNGEKLS-------PNQQRISVVWN-DDDSSTLTIYNANIDDAGIYK 78 (291)
T ss_dssp EESSSEEEETTCCEEEEEEESSCCSCCEEEEECTTSCBCC-------SSCSSEEEEEE-ETTEEEEEECSCCGGGCEEEE
T ss_pred ecCCCceEeCCCeEEEEEEeCCCCCCcEeEEECCCCeECc-------cCCceEEEEEc-CCCeEEEEEecCCCCCCEEEE
Confidence 345567899999999999999876 689999985432221 13567776532 345789999999999999999
Q ss_pred EeecCC--CCeeEEEEeceec
Q psy14080 90 CQAQPY--TTTSHSQNAPGLG 108 (113)
Q Consensus 90 C~~~~~--~~~s~~~~L~V~g 108 (113)
|.+... ...+..+.|.|..
T Consensus 79 C~~~n~~g~~~~~~~~l~v~~ 99 (291)
T 1qz1_A 79 CVVTAEDGTQSEATVNVKIFQ 99 (291)
T ss_dssp EEEECTTSCEEEEEEEEEEEC
T ss_pred EEEEcCCCCeeEEEEEEEeec
Confidence 999643 2446777777764
No 359
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.41 E-value=1.3e-12 Score=96.17 Aligned_cols=81 Identities=16% Similarity=0.162 Sum_probs=66.1
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
..+.++.+|+++.|.|.+.+.+.+.|.|+|. +..+ ..++|+.+. +.+|.|.+++.+|+|.|+|.+
T Consensus 302 ~~~~~v~~g~~v~l~C~~~g~P~p~i~W~k~--g~~l-------~~~~~~~~~------~~~L~i~~v~~~D~G~Y~C~A 366 (384)
T 3kld_A 302 INDIHVAMEESVFWECKANGRPKPTYRWLKN--GDPL-------LTRDRIQIE------QGTLNITIVNLSDAGMYQCVA 366 (384)
T ss_dssp CCCEEECTTCCEEEECEEEEESCCEEEEEET--TEEC-------CCBTTEEEE------TTEEEESSCCGGGCEEEEEEE
T ss_pred CCceEecCCCCEEEEeECCccCCCeEEEEEC--CEEC-------CCCccEEEe------CCEEEEeecChhhCEEEEEEE
Confidence 4567889999999999999999999999984 3333 235677764 338999999999999999999
Q ss_pred -cCCCCeeEEEEeceec
Q psy14080 93 -QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 93 -~~~~~~s~~~~L~V~g 108 (113)
+..+..+..+.|.|++
T Consensus 367 ~N~~G~~~~~a~L~V~~ 383 (384)
T 3kld_A 367 ENKHGVIFSSAELSVIA 383 (384)
T ss_dssp EETTEEEEEEEEEEEC-
T ss_pred EeCCceEEeceEEEEec
Confidence 5668888889999975
No 360
>1vca_A VCAM-D1,2, human vascular cell adhesion molecule-1; immunoglobulin superfamily, integrin-binding, cell adhesion protein; 1.80A {Homo sapiens} SCOP: b.1.1.3 b.1.1.4 PDB: 1ij9_A 1vsc_A
Probab=99.41 E-value=2.5e-12 Score=87.74 Aligned_cols=80 Identities=10% Similarity=0.015 Sum_probs=59.2
Q ss_pred EEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeec-C
Q psy14080 16 STGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQ-P 94 (113)
Q Consensus 16 ~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~-~ 94 (113)
+.+.+|++++|.|.+.+.+.+.|.|+|..+. .+ ..+.... ...++|.|.+++.+|+|.|+|.+. .
T Consensus 11 ~~~~~G~~v~L~C~~~g~P~p~i~W~~~~~~-~~---------~~~~~~~----~~~~~L~I~~v~~~D~G~Y~C~a~n~ 76 (202)
T 1vca_A 11 YLAQIGDSVSLTCSTTGCESPFFSWRTQIDS-PL---------NGKVTNE----GTTSTLTMNPVSFGNEHSYLCTATCE 76 (202)
T ss_dssp EEEETTSCEEEEEEEESCSSCEEEEEETTCC-CC---------SSEEEEE----TTEEEEEESSCCGGGCSEEEEEEEET
T ss_pred EEEcCCCcEEEEEeecCCCCCeEEEECCCCC-Cc---------cceEEEc----CCccEEEECcCCHHHCEEEEEEEEEC
Confidence 4455999999999999888889999884321 11 1222211 246789999999999999999995 4
Q ss_pred CCCeeEEEEeceecc
Q psy14080 95 YTTTSHSQNAPGLGD 109 (113)
Q Consensus 95 ~~~~s~~~~L~V~g~ 109 (113)
.+..+..+.|.|...
T Consensus 77 ~~~~~~~~~l~V~~~ 91 (202)
T 1vca_A 77 SRKLEKGIQVEIYSF 91 (202)
T ss_dssp TEEEEEEEEEEEEBC
T ss_pred CceEeeEEEEEEEeC
Confidence 455677888888753
No 361
>2yd6_A PTPRD protein; hydrolase; HET: FLC; 1.35A {Homo sapiens} PDB: 2yd7_A 2yd2_A 2yd3_A 2yd4_A* 2yd8_A* 2yd5_A* 3pxh_A
Probab=99.40 E-value=2.2e-12 Score=87.52 Aligned_cols=93 Identities=18% Similarity=0.141 Sum_probs=64.9
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
......+.+|+++.|.|.+.+.+.+.+.|+|.. ..+... ....|+.... +....+|.|.+++.+|+|.|+|.
T Consensus 114 ~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g--~~l~~~----~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~ 185 (212)
T 2yd6_A 114 GPQLKVVERTRTATMLCAASGNPDPEITWFKDF--LPVDTS----NNNGRIKQLR--SESIGALQIEQSEESDQGKYECV 185 (212)
T ss_dssp CCCCEEEETTSCEEEEEEEECSSCCEEEEEETT--EEC----------CCEEEEE--ETTEEEEEECSCCGGGCEEEEEE
T ss_pred CCcceeEecCCCEEEEEEecCCCCCeEEEEECC--ccccCc----CCCceEEEEe--cCCeEEEEEcCCCcccCEEEEEE
Confidence 345567889999999999999888999999843 222211 1246777653 23468999999999999999999
Q ss_pred ec-CCCC-eeEEEEeceeccccc
Q psy14080 92 AQ-PYTT-TSHSQNAPGLGDLLM 112 (113)
Q Consensus 92 ~~-~~~~-~s~~~~L~V~g~~~~ 112 (113)
+. ..+. .+..++|.|......
T Consensus 186 a~N~~G~~~s~~a~l~~~~~~~~ 208 (212)
T 2yd6_A 186 ATNSAGTRYSAPANLYVRGTKHH 208 (212)
T ss_dssp EEETTEEEECCCEEEEEEC----
T ss_pred EECCCCccccccccEEEEecccc
Confidence 94 4444 356788888766543
No 362
>3zyj_A Leucine-rich repeat-containing protein 4C; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}
Probab=99.40 E-value=1.5e-12 Score=97.96 Aligned_cols=90 Identities=18% Similarity=0.191 Sum_probs=67.2
Q ss_pred eecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEE
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (113)
.....+++.+|++++|.|.+. .+.+.|.|++.+ +.++..+ ..+.|+.+. .+.+|+|.+++.+|+|.|+|
T Consensus 346 ~~~~~~~v~~G~~v~L~C~~~-~p~p~i~W~~~~-~~~~~~~----~~~~~~~~~-----~~~~L~I~~v~~~D~G~Y~C 414 (440)
T 3zyj_A 346 EPPADLNVTEGMAAELKCRAS-TSLTSVSWITPN-GTVMTHG----AYKVRIAVL-----SDGTLNFTNVTVQDTGMYTC 414 (440)
T ss_dssp ECCCCEEECTTSCCEECCEES-STTSEEEEECTT-SCEEESS----SCCSSEEEC-----TTCCEEESSCCSTTCEEEEE
T ss_pred ccccceeeccCceEEEEeecC-CCCCceEEEeCC-Cceeecc----CCCceEEEc-----cCCeEEEccCChhhCEEEEE
Confidence 446678999999999999995 577899999854 3333221 124577765 24579999999999999999
Q ss_pred ee-cCCCCeeEEEEeceecccc
Q psy14080 91 QA-QPYTTTSHSQNAPGLGDLL 111 (113)
Q Consensus 91 ~~-~~~~~~s~~~~L~V~g~~~ 111 (113)
.+ +..+..+..+.+.|.+...
T Consensus 415 ~a~N~~G~~~~~~~~~v~~~~~ 436 (440)
T 3zyj_A 415 MVSNSVGNTTASATLNVTGTHH 436 (440)
T ss_dssp EEECSSCEEEEEEEEEEC----
T ss_pred EEEcCCCcEEEEEEEEEecccc
Confidence 99 4568888899999987643
No 363
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.40 E-value=7.9e-13 Score=87.35 Aligned_cols=80 Identities=13% Similarity=0.184 Sum_probs=62.2
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-c
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA-Q 93 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-~ 93 (113)
...+.+|+++.|.|.+.+.+.+.+.|+|. +..+ ..+.++.+.. ...+|.|.+++.+|+|.|+|.+ +
T Consensus 107 ~~~~~~g~~v~l~C~~~g~p~~~v~W~~~--g~~~-------~~~~~~~~~~----~~~~L~i~~~~~~d~G~Y~C~a~n 173 (189)
T 2v5t_A 107 NATAERGEEMTFSCRASGSPEPAISWFRN--GKLI-------EENEKYILKG----SNTELTVRNIINSDGGPYVCRATN 173 (189)
T ss_dssp EEETTSCCCEEEECEEEEESCCEEEEEET--TEEC-------CCSSSEEEET----TTTEEEECSCCGGGCEEEEEEEEE
T ss_pred cccccCCCcEEEEEEEccCCCCeEEEEEC--CEEC-------cCCCcEEEec----CCCEEEEcCCChhhCeeEEEEEEe
Confidence 45667899999999999888889999984 3332 2355666542 3558999999999999999999 4
Q ss_pred CCCCeeEEEEecee
Q psy14080 94 PYTTTSHSQNAPGL 107 (113)
Q Consensus 94 ~~~~~s~~~~L~V~ 107 (113)
..+..+..+.|.|.
T Consensus 174 ~~g~~~~~~~l~V~ 187 (189)
T 2v5t_A 174 KAGEDEKQAFLQVF 187 (189)
T ss_dssp TTEEEEEEEEEEEE
T ss_pred CCCceeEEEEEEEE
Confidence 55677777888775
No 364
>1hnf_A CD2; T lymphocyte adhesion glycoprotein; HET: NAG; 2.50A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1cdb_A 1gya_A* 1qa9_A
Probab=99.40 E-value=9.2e-13 Score=89.36 Aligned_cols=92 Identities=13% Similarity=0.093 Sum_probs=63.7
Q ss_pred cceEEEecCCcEEEEEEEcc--CCCCEEEEEecCCCeEE-Ee--cceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 13 GQISTGFLAVFSYSDKTVRD--IVKVRVSWVRRRDWHIL-TS--GVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~--~~~~~V~W~k~~~~~~l-~~--~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
+..+.+.+|++|+|+|.... .+.+.|.|+|..+...+ .. +...+..++|+.+. .+++|.|++++.+|+|.
T Consensus 6 ~~~v~g~~G~sv~L~~~~~~~~~~~~~i~W~k~~~~~~i~~~~~~~~~~~~~~R~~~~-----~ngsL~I~~v~~~DsG~ 80 (182)
T 1hnf_A 6 ALETWGALGQDINLDIPSFQMSDDIDDIKWEKTSDKKKIAQFRKEKETFKEKDTYKLF-----KNGTLKIKHLKTDDQDI 80 (182)
T ss_dssp CEEEEEETTSCEEECCTTCCCCSSEEEEEEEEGGGCCEEEEECGGGCEEESCTTEEEC-----TTSCEEECSCCGGGCEE
T ss_pred ccEEEEecCCCEEEeCCcccccCcCCEEEEEECCCCcEEEEEeCccCCCCCCCeEEEC-----CCCCEEECCCChhhCEE
Confidence 46688999999999995432 34568999984323222 21 11122357898876 24599999999999999
Q ss_pred EEEeec-CCCCe--eEEEEeceecc
Q psy14080 88 YECQAQ-PYTTT--SHSQNAPGLGD 109 (113)
Q Consensus 88 Y~C~~~-~~~~~--s~~~~L~V~g~ 109 (113)
|.|.+. ..+.. +..+.|.|...
T Consensus 81 Y~c~~~n~~g~~~~~~~~~L~V~~~ 105 (182)
T 1hnf_A 81 YKVSIYDTKGKNVLEKIFDLKIQER 105 (182)
T ss_dssp EEEEEEETTSCEEEEEEEEEEEECC
T ss_pred EEEEEEeCCCceeEEEEEEEEEcCc
Confidence 999995 44433 46778888753
No 365
>2rcj_C Light chain; immunoglobulin M, polymeric antibodies, immunology, X-RAY solution scattering, constrained modelling, immune system; NMR {Homo sapiens}
Probab=99.40 E-value=1.7e-12 Score=98.69 Aligned_cols=94 Identities=16% Similarity=0.158 Sum_probs=66.5
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCC---eEEEe-cce-EEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW---HILTS-GVL-TYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~---~~l~~-~~~-~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
+..+++.+|++++|+|.+.+.+.+.|.|||...+ ..+.. ... ....++||... .+.+.++|+|.+++.+|+|.
T Consensus 7 p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~--~~~~~~~L~I~~v~~~D~G~ 84 (523)
T 2rcj_C 7 PPSASGTPGQRVTISCTGTSSGSITVNWYQQLPGMAPKLLIYRDAMRPSGVPTRFSGS--KSGTSASLAISGLEAEDESD 84 (523)
T ss_pred CCceEEecCCcEEEEEEEeccCCceEEEEEeCCCCCcEEEEEeccccCcccCCcEEEe--cCCCEEEEEECCCChhhCEE
Confidence 5567899999999999999888889999997522 22221 110 01124788854 44567899999999999999
Q ss_pred EEEeecCCC----CeeEEEEeceec
Q psy14080 88 YECQAQPYT----TTSHSQNAPGLG 108 (113)
Q Consensus 88 Y~C~~~~~~----~~s~~~~L~V~g 108 (113)
|+|.+.... ..+..+.|.|.+
T Consensus 85 Y~C~a~n~~g~~~~~~~~~~l~V~~ 109 (523)
T 2rcj_C 85 YYCASWNSSDNSYVFGTGTKVTVLG 109 (523)
T ss_pred EEEEEccCCCccccccCceEEEecc
Confidence 999996432 233456777743
No 366
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.40 E-value=1e-12 Score=87.46 Aligned_cols=79 Identities=14% Similarity=0.119 Sum_probs=61.5
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-c
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA-Q 93 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-~ 93 (113)
...+.+|+++.|.|.+.+.+.+.|.|+|... .+ ..+..... ...+|.|.+++.+|+|.|+|.+ +
T Consensus 122 ~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~--~~---------~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~n 186 (201)
T 3s97_C 122 DVYALMGQNVTLECFALGNPVPDIRWRKVLE--PM---------PSTAEIST----SGAVLKIFNIQLEDEGIYECEAEN 186 (201)
T ss_dssp CEEEETTCCEEEEEEEEEESCCEEEEEETTB--CC---------CTTCEEET----TTTEEEECSCCGGGCEEEEEEEEE
T ss_pred ceEEecCCcEEEEEEccCCCCCceEEEeCCC--cC---------CCceeecC----CCCEEEEccCChhhCEEEEEEEEe
Confidence 7789999999999999988889999998542 11 11222221 2459999999999999999999 4
Q ss_pred CCCCeeEEEEeceec
Q psy14080 94 PYTTTSHSQNAPGLG 108 (113)
Q Consensus 94 ~~~~~s~~~~L~V~g 108 (113)
..+..+..+.|.|++
T Consensus 187 ~~g~~~~~~~l~V~a 201 (201)
T 3s97_C 187 IRGKDKHQARIYVQA 201 (201)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred cCCceeeeEEEEEeC
Confidence 567778888888863
No 367
>2v44_A NCAM2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, IG, membrane, homphilic, glycoprotein, transmembrane; 1.77A {Homo sapiens} PDB: 2xy2_A* 2vaj_A
Probab=99.40 E-value=3.1e-12 Score=84.87 Aligned_cols=74 Identities=23% Similarity=0.255 Sum_probs=55.9
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
.....+.+|+++.|.|.+.+.+.+.+.|+|.... +.. ..+.|+... .+.+|.|.+++.+|+|.|+|.+
T Consensus 103 ~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~~~~-~~~------~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~a 170 (189)
T 2v44_A 103 VSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNEE-VTT------ISDNRFAML-----ANNNLQILNINKSDEGIYRCEG 170 (189)
T ss_dssp CCSEEEETTSCEEECCEEECSSCCEEEEEEEC---CEE------CCCTTEEEC-----TTSCEEETTCCGGGCEEEEEEE
T ss_pred CCcEEEeCCCCEEEEEEECcCCCCcEEEEECCcE-Eec------cCCCCEEEe-----cCCcEEEEEcCcccCeEEEEEE
Confidence 3446789999999999999988889999986432 111 235688765 2348999999999999999999
Q ss_pred c-CCCCe
Q psy14080 93 Q-PYTTT 98 (113)
Q Consensus 93 ~-~~~~~ 98 (113)
. ..+..
T Consensus 171 ~n~~~~~ 177 (189)
T 2v44_A 171 RVEARGE 177 (189)
T ss_dssp EETTTTE
T ss_pred EccccCc
Confidence 4 44333
No 368
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.40 E-value=2.6e-12 Score=90.36 Aligned_cols=89 Identities=12% Similarity=-0.037 Sum_probs=63.9
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCC--CeEEEecceEEcCCCCEEEEEe--CCCCcEEEEEccCCCCCCEEEE
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD--WHILTSGVLTYTNDARFQVIHT--DGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~--~~~l~~~~~~~~~~~R~~~~~~--~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
....+.+|+++.|.|.+.+.+.+.|.|+|... ...+ .+...... ......+|.|.+++.+|+|.|.
T Consensus 189 ~~~~v~~G~~v~L~C~~~g~p~p~v~W~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 258 (289)
T 3mjg_X 189 VQTVVRQGENITLMCIVIGNEVVNFEWTYPRKESGRLV----------EPVTDFLLDMPYHIRSILHIPSAELEDSGTYT 258 (289)
T ss_dssp SCSEEETTSCEEEEEEEESCSSBEEEEECTTSSSSCCC----------CCEEEESCTTTTEEEEEEEESSCCSSCCEEEE
T ss_pred CcceeEcCCCEEEEEEECCCCCcceEEEcCCccCCCcc----------cccccccCCcceEEEEEEEEcccChhhCcEEE
Confidence 33678999999999999998889999996431 1100 00000000 0123579999999999999999
Q ss_pred Eee-cCCCCeeEEEEeceeccccc
Q psy14080 90 CQA-QPYTTTSHSQNAPGLGDLLM 112 (113)
Q Consensus 90 C~~-~~~~~~s~~~~L~V~g~~~~ 112 (113)
|.+ +..+..+..+.|.|.+.-.|
T Consensus 259 C~a~N~~G~~~~~~~l~v~~~~~~ 282 (289)
T 3mjg_X 259 CNVTESVNDHQDEKAINITVVESG 282 (289)
T ss_dssp EEEEETTTTEEEEEEEEEEEEC--
T ss_pred EEeecCCCCceeEEEEEEEEEecC
Confidence 999 56788888999999887655
No 369
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.40 E-value=6.6e-13 Score=88.22 Aligned_cols=91 Identities=15% Similarity=0.135 Sum_probs=61.8
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceE-Ec----CCCCEEEEEe-CCCCcEEEEEccCCCCCCEE
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLT-YT----NDARFQVIHT-DGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~-~~----~~~R~~~~~~-~~~~~~~L~I~~v~~~D~G~ 87 (113)
..+++.+|++++|+|.+.+.+.+.|.|+|.+...++...... .. ...|+..... ..++.++|.|.+++.+|+|.
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~i~W~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~i~~v~~~D~G~ 82 (184)
T 2ny1_B 3 KVVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDT 82 (184)
T ss_dssp CEEEEETTSCEEECCBCSSSSCCCEEEEETTCCEEEEEETTEEEECSCTTGGGEECCGGGGGGTBCCEEECSCCGGGCEE
T ss_pred CcEEEeCCCCEEEEEEEcCCCceEEEEEeCCccceEEecCceEecCChhhCCccccccccccCCeEEEEEecCCHHHCEE
Confidence 457899999999999999888889999997543333221111 11 1346655311 02346789999999999999
Q ss_pred EEEeecCCCCeeEEEEecee
Q psy14080 88 YECQAQPYTTTSHSQNAPGL 107 (113)
Q Consensus 88 Y~C~~~~~~~~s~~~~L~V~ 107 (113)
|.|.+... ...+.|.|.
T Consensus 83 Y~C~~~~~---~~~~~l~V~ 99 (184)
T 2ny1_B 83 YICEVEDQ---KEEVQLLVF 99 (184)
T ss_dssp EEEEETTE---EEEEEEEEE
T ss_pred EEEEEEcC---CCcEEEEEE
Confidence 99999653 224556654
No 370
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.39 E-value=4.6e-13 Score=91.87 Aligned_cols=98 Identities=14% Similarity=0.157 Sum_probs=65.2
Q ss_pred eeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecC--CCeEEEecceEEcCCCCEEEEE----eCCCCcEEEEEccC
Q psy14080 7 GILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRR--DWHILTSGVLTYTNDARFQVIH----TDGSDDWNLQIKFL 80 (113)
Q Consensus 7 ~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~--~~~~l~~~~~~~~~~~R~~~~~----~~~~~~~~L~I~~v 80 (113)
.+.........+.+|+++.|.|.+.+.+.+.+.|+|.. ++..+..+ ...++.... .......+|.|.++
T Consensus 115 ~~~~~~~~~~~~~~g~~v~L~C~~~~~p~p~v~W~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~L~i~~~ 189 (241)
T 3grw_A 115 ILQAGLPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPD-----GTPYVTVLKSWISESVEADVRLRLANV 189 (241)
T ss_dssp EEEECTTCSEECCTTCCEEEEEEEECSSCCEEEEEEECCSSSCSSCTT-----TCCCEEEEEEEECSBSEEEEEEEECSC
T ss_pred eeecCCCccceecCCCEEEEEEEEecCCCCEEEEEEcccCCCcccCCC-----CceeeeeeeEeeeeecCCceEEEECcC
Confidence 33444456677889999999999999888899999942 11111100 011111110 01224678999999
Q ss_pred CCCCCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 81 QKRDNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 81 ~~~D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
+.+|+|.|+|.+. ..+..+..+.|.|.+.
T Consensus 190 ~~~d~G~Y~C~a~N~~g~~~~~~~l~V~~~ 219 (241)
T 3grw_A 190 SERDGGEYLCRATNFIGVAEKAFWLSVHGP 219 (241)
T ss_dssp CGGGCEEEEEEEECSSCEEEEEEEEEC---
T ss_pred CcccCcEEEEEEecCcceEEEEEEEEecCC
Confidence 9999999999994 5677788899998764
No 371
>1igy_B IGG1 intact antibody MAB61.1.3; intact immunoglobulin, V region, C region, hinge region, immunoglobulin; HET: NAG FUL NDG BMA MAN GAL FUC; 3.20A {Mus musculus} SCOP: b.1.1.1 b.1.1.2 b.1.1.2 b.1.1.2
Probab=99.38 E-value=1.3e-13 Score=102.84 Aligned_cols=96 Identities=8% Similarity=0.083 Sum_probs=65.7
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCC---eEE-Eecc---e-E--EcCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDW---HIL-TSGV---L-T--YTNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~---~~l-~~~~---~-~--~~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
...+++.+|++|+|+|.+.+.+ .+.|.|||+..+ ..+ .... . . ...++||.+..+..++.++|+|.++
T Consensus 6 ~~~~~v~~G~~v~L~C~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v 85 (434)
T 1igy_B 6 SGAELARPGASVKMSCKASGYTFTTYTIHWIKQRPGQGLEWIGYINPSSVYTNYNQRFKDKATLTRDRSSNTANIHLSSL 85 (434)
T ss_dssp CCCCEECTBCCEEECCEECSSCGGGCCCEEEEECTTCCEEEEEECCSSSCCCCCCGGGTTTEECCBCGGGCBBCEEECSB
T ss_pred CCCeEecCCCCEEEEEEccCCcccCceEEEEEECCCCCCEEEEEEccCCCceecCccccccEEEEEECCCCEEEEEECCC
Confidence 4557899999999999998753 578999998632 122 2110 0 0 0125799876433345789999999
Q ss_pred CCCCCEEEEEeecCC-CCeeEEEEeceec
Q psy14080 81 QKRDNGTYECQAQPY-TTTSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~~-~~~s~~~~L~V~g 108 (113)
+.+|+|.|+|.+... ......+.|.|.+
T Consensus 86 ~~~D~G~Y~C~~~~~~~~~~~~~~l~V~~ 114 (434)
T 1igy_B 86 TSDDSAVYYCVREGEVPYWGQGTTVTVSS 114 (434)
T ss_dssp CGGGCSEECCCCSSSSCCCCCCEECEECC
T ss_pred ChHHCEEEEEEEEccccccCCceEEEEcc
Confidence 999999999999543 2334456777753
No 372
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.38 E-value=3.8e-12 Score=94.26 Aligned_cols=82 Identities=17% Similarity=0.216 Sum_probs=60.9
Q ss_pred cceEEEecCCcEEEEEEEccCC--CCEEEEEecCCCe---EEE-e----cceEE--cCCCCEEEEEeCCCCcEEEEEccC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDWH---ILT-S----GVLTY--TNDARFQVIHTDGSDDWNLQIKFL 80 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~~---~l~-~----~~~~~--~~~~R~~~~~~~~~~~~~L~I~~v 80 (113)
.....+.+|++++|.|.+.+.+ .+.|.|||...+. .+. . +.... ...+||.+..+...+.++|.|.++
T Consensus 225 ~~~~~v~~G~~v~L~C~~~g~p~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L~I~~v 304 (438)
T 1qgc_4 225 SGGGLVKPGGSLKLSCTASGFIFNRCAMSWVRQTPEKRLEWVATISSGGTYTYYPDSVKGRFTISRDNAKNTLYLQMSSL 304 (438)
T ss_dssp ECCEEECTTCCEEEEEEEESSCGGGSCEEEEEEETTTEEEEEEEECTTSCCEECCGGGTTTEEEEEETTTTEEEEEECSC
T ss_pred CCceEEecCCcEEEEEEEcccccCCcEEEEEECCCCCCcEEEEEEeecCCceecCcccCCcEEEEeecCCCeEEEEECCC
Confidence 4567899999999999999877 5789999975222 111 1 00111 135799987655567889999999
Q ss_pred CCCCCEEEEEeecC
Q psy14080 81 QKRDNGTYECQAQP 94 (113)
Q Consensus 81 ~~~D~G~Y~C~~~~ 94 (113)
+.+|+|.|+|.+..
T Consensus 305 ~~~D~G~Y~C~a~n 318 (438)
T 1qgc_4 305 RSADTAMYYCVRRE 318 (438)
T ss_dssp CGGGCCEEEEEECC
T ss_pred ChhhCEEEEEEEEc
Confidence 99999999999964
No 373
>2yd1_A Tyrosine-protein phosphatase LAR; hydrolase; 1.80A {Drosophila melanogaster} PDB: 3pxj_A
Probab=99.38 E-value=2.7e-12 Score=86.95 Aligned_cols=85 Identities=16% Similarity=0.155 Sum_probs=63.0
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
......+.+|+++.|.|.+.+.+.+.|.|+|.. ..+. ..+.|+.+. +.+|.|.+++.+|+|.|+|.
T Consensus 116 ~~~~~~~~~g~~v~l~C~~~g~p~p~i~W~~~~--~~~~------~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~ 181 (212)
T 2yd1_A 116 GPGTRVIEVGHTVLMTCKAIGNPTPNIYWIKNQ--TKVD------MSNPRYSLK------DGFLQIENSREEDQGKYECV 181 (212)
T ss_dssp CCCCEEEETTCCEEECCEEECSSCCEEEEEETT--EECC------TTSTTEEEE------TTEEEECSCCGGGCEEEEEE
T ss_pred CCCceEeecCCeEEEEEEeccCCCCeEEEEECC--eEcc------cCCCeEEcc------CCeEEEccCChhhCEEEEEE
Confidence 345577889999999999999888899999843 2221 135677554 23999999999999999999
Q ss_pred ec-CCCCee-EEEEeceeccc
Q psy14080 92 AQ-PYTTTS-HSQNAPGLGDL 110 (113)
Q Consensus 92 ~~-~~~~~s-~~~~L~V~g~~ 110 (113)
+. ..+..+ ..+.|.|.+..
T Consensus 182 a~N~~G~~~s~~~~l~V~~~~ 202 (212)
T 2yd1_A 182 AENSMGTEHSKATNLYVKVRR 202 (212)
T ss_dssp EEETTEEEECCCEEEEEEC--
T ss_pred eecCCCceeEEEEEEEEEecc
Confidence 95 445543 34788888754
No 374
>1qz1_A Neural cell adhesion molecule 1, 140 kDa isoform; IG modules, NCAM; 2.00A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ie5_A
Probab=99.38 E-value=1.2e-12 Score=91.99 Aligned_cols=86 Identities=16% Similarity=0.171 Sum_probs=64.8
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-c
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA-Q 93 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-~ 93 (113)
..++.+|+++.|.|.+.+.+.+.+.|+|. +..+..+. ....|+... ....+|.|.+++.+|+|.|+|.+ +
T Consensus 205 ~~~~~~g~~v~l~C~~~g~p~p~i~W~~~--g~~~~~~~---~~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~a~N 275 (291)
T 1qz1_A 205 NATANLGQSVTLVCDADGFPEPTMSWTKD--GEPIENEE---EDDEKHIFS----DDSSELTIRNVDKNDEAEYVCIAEN 275 (291)
T ss_dssp EEETTSCCCEEEEEEEEEESCCEEEEEET--TEECCCC-----CCSSEEEC----TTSCEEEECSCCGGGCEEEEEEEEE
T ss_pred ccccccCceEEEEEEEEEeCCCcEEEEEC--CEECcCCC---CCCcceEEc----CCCcEEEEEecChhcCEEEEEEEEe
Confidence 45678899999999999988899999984 33322110 012466553 23568999999999999999999 5
Q ss_pred CCCCeeEEEEeceecc
Q psy14080 94 PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 94 ~~~~~s~~~~L~V~g~ 109 (113)
..+..+..+.|.|.++
T Consensus 276 ~~G~~~~~~~l~V~~k 291 (291)
T 1qz1_A 276 KAGEQDASIHLKVFAK 291 (291)
T ss_dssp TTEEEEEEEEEEEECC
T ss_pred CCCceEEEEEEEEEcC
Confidence 6677888999998753
No 375
>2wv3_A Neuroplastin; igcam, membrane, glycoprotein, cell membrane, cell adhesion, transmembrane, disulfide bond, alternative splicing; HET: NAG; 1.95A {Rattus norvegicus}
Probab=99.37 E-value=2.4e-12 Score=85.73 Aligned_cols=86 Identities=12% Similarity=0.090 Sum_probs=63.1
Q ss_pred CceeeEeecceEEEec-CCcEEEEEEEccCCC--CEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 5 PGGILTAFGQISTGFL-AVFSYSDKTVRDIVK--VRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~-G~~a~L~C~v~~~~~--~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
|+.|.. ...+++.+ |+++.|.|.+.+.+. +.+.|+|.. ..+ ...++.. .+.+|.|.+++
T Consensus 3 ~P~i~~--~~~~~v~~~G~~v~l~C~~~~~~~~~~~v~W~~~~--~~~--------~~~~~~~------~~~~L~i~~~~ 64 (190)
T 2wv3_A 3 EPRIVT--SEEVIIRDSLLPVTLQCNLTSSSHTLMYSYWTKNG--VEL--------TATRKNA------SNMEYRINKPR 64 (190)
T ss_dssp CCEEEE--CCCEECCCSSSCEEEEEEEEECSSCEEEEEEEETT--EEC--------TTCCBCC------SEEEEEESSCC
T ss_pred CCcccc--cceEEEccCCceEEEEEEeccCCCCceEEEEEECC--EEC--------cccceEe------ccEEEEEecCC
Confidence 555655 34456667 999999999998776 789999842 222 1222211 46799999999
Q ss_pred CCCCEEEEEeecCCCCeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~~~~s~~~~L~V~g 108 (113)
.+|+|.|.|.+......+..+.|.|..
T Consensus 65 ~~d~G~Y~C~~~n~~~~~~~~~l~V~~ 91 (190)
T 2wv3_A 65 AEDSGEYHCVYHFVSAPKANATIEVKA 91 (190)
T ss_dssp GGGCEEEEEEEEETTEEEEEEEEEEEC
T ss_pred cccCEEEEEEEEeCCcccccEEEEEec
Confidence 999999999995446667788888865
No 376
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.37 E-value=4.1e-12 Score=92.57 Aligned_cols=81 Identities=19% Similarity=0.149 Sum_probs=65.6
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
.....+.+|+++.|.|.+.+.+.+.|.|+|. +..+ ..+.|+.+. +.+|.|.+++.+|+|.|+|.+
T Consensus 301 ~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~--g~~~-------~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~a 365 (382)
T 1cs6_A 301 ITDTEADIGSDLRWSCVASGKPRPAVRWLRD--GQPL-------ASQNRIEVS------GGELRFSKLVLEDSGMYQCVA 365 (382)
T ss_dssp CCCEEEETTCCEEEECEEEEESCCEEEEEET--TEEC-------CCCSSEEEE------TTEEEESSCCGGGCEEEEEEE
T ss_pred CCccEEcCCCeEEEEEEeeeecCCEEEEEEC--CEEC-------CCCceEEEE------CCEEEECcCCcccCEEEEEEE
Confidence 3456789999999999999988899999984 3332 235677764 338999999999999999999
Q ss_pred -cCCCCeeEEEEeceec
Q psy14080 93 -QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 93 -~~~~~~s~~~~L~V~g 108 (113)
+..+..+..+.|.|++
T Consensus 366 ~N~~G~~~~~~~l~V~a 382 (382)
T 1cs6_A 366 ENKHGTVYASAELTVQA 382 (382)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred EeCCCeEEEEEEEEEeC
Confidence 5667888889999874
No 377
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.37 E-value=5.4e-12 Score=96.80 Aligned_cols=98 Identities=13% Similarity=0.040 Sum_probs=69.8
Q ss_pred ecceEEEecCCcEEEEEEEccCCC---CEEEEEecCCC---eEEEecceE--EcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVK---VRVSWVRRRDW---HILTSGVLT--YTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~---~~V~W~k~~~~---~~l~~~~~~--~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.++++++.+|++++|.|.+.+.+. ..|.|||.... ..+...... ....+|+.+.....++.++|+|.+++.+
T Consensus 6 ~P~~v~v~~G~~v~L~C~~~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~ 85 (585)
T 2ocw_A 6 GPEEVNSVEGNSVSITCYYPPTSVNRHTRKYWCRQGARGGCITLISSEGYVSSKYAGRANLTNFPENGTFVVNIAQLSQD 85 (585)
T ss_pred CcceeEEecCCcEEEEEeCCCCcCCCcccEEEEeCCCCCCceEEEECCCcccceeeceEEEEecCCCCEEEEEECCCCcc
Confidence 345688999999999999987653 37999997532 122211111 1124688876433566789999999999
Q ss_pred CCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 84 DNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
|+|.|.|.+. .....+..+.|.|...
T Consensus 86 D~G~Y~C~~~n~~~~~~~~~~l~V~~~ 112 (585)
T 2ocw_A 86 DSGRYKCGLGINSRGLSFDVSLEVSQG 112 (585)
T ss_pred cCEEEEEEcccCCCCceEEEEEEEecC
Confidence 9999999994 4456677788888654
No 378
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.37 E-value=1.2e-12 Score=93.56 Aligned_cols=105 Identities=12% Similarity=0.210 Sum_probs=68.2
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccC----CCCEEEEEecCCC---eEEEecc---eEE--cCCCCEEEEEeCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDI----VKVRVSWVRRRDW---HILTSGV---LTY--TNDARFQVIHTDGSD 71 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~----~~~~V~W~k~~~~---~~l~~~~---~~~--~~~~R~~~~~~~~~~ 71 (113)
.|+........++++.+|++++|+|.+.+. +...|.|+|.... .+..... ... ...+|+.+. ....+
T Consensus 12 ~~~~~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~~~~~~i~~~~~~~~~~~~~~~~~r~~~~-~~~~~ 90 (331)
T 3u83_A 12 RDPSQVVQVNDSMYGFIGTDVVLHCSFANPLPSVKITQVTWQKSTNGSKQNVAIYNPSMGVSVLAPYRERVEFL-RPSFT 90 (331)
T ss_dssp ---------CEEEEEETTCCEEECCBCSSCCSSCEEEEEEEEEEETTEEEEEEEEETTTEEEECTTCTTTEEES-SCSSS
T ss_pred CCCcceEEcCCcEEEEecCCEEEeeecCCCCCCCceEEEEEEEcCCCCCceEEEEeccCCCCcCcccCCceEec-ccCCC
Confidence 355556677778999999999999999876 4457999995432 1222110 011 135788775 23456
Q ss_pred cEEEEEccCCCCCCEEEEEeec--CCCCeeEEEEeceecc
Q psy14080 72 DWNLQIKFLQKRDNGTYECQAQ--PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 72 ~~~L~I~~v~~~D~G~Y~C~~~--~~~~~s~~~~L~V~g~ 109 (113)
+.+|.|.+++.+|+|.|.|.+. ..+..+..+.|.|...
T Consensus 91 ~~~L~I~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 130 (331)
T 3u83_A 91 DGTIRLSRLELEDEGVYICEFATFPTGNRESQLNLTVMAK 130 (331)
T ss_dssp BCCEEECSCCGGGCEEEEEEEEEETTEEEEEEEEEEEEBC
T ss_pred CceEEEcccCcccCcEEEEEEEecCCCccEEEEEEEEecC
Confidence 7799999999999999999863 2355677788888763
No 379
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.36 E-value=5.8e-12 Score=97.29 Aligned_cols=94 Identities=14% Similarity=0.163 Sum_probs=70.0
Q ss_pred cCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 3 ~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
..|+.++. ..+++.+.+|++++|.|.+.+.+.+.|.|||.. . .+ ...+|+.+.. .++..+|.|.+++.
T Consensus 3 ~~pP~f~~-~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~k~g-~-~l-------~~~~~~~~~~--~~~~~~L~I~~v~~ 70 (570)
T 3b43_A 3 MEPPYFIE-PLEHVEAAIGEPITLQCKVDGTPEIRIAWYKEH-T-KL-------RSAPAYKMQF--KNNVASLVINKVDH 70 (570)
T ss_dssp CCCCEEEE-CCCCEEECTTSCEEEEEEEESSSSCEEEEECSS-S-BC-------CCCSSEEEEC--CTTEEEEEESSCCG
T ss_pred CCCCcceE-ECCceEEcCCCEEEEEEEEccCCCCEEEEEECC-E-Ec-------cCCCCEEEEE--ECCEEEEEEccCCh
Confidence 34666554 455788999999999999999999999999843 2 12 2356777652 34568999999999
Q ss_pred CCCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 83 RDNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 83 ~D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
+|+|.|.|.+. ..+.....+.|.|..
T Consensus 71 ~D~G~Y~C~a~N~~g~~~~~~~l~v~~ 97 (570)
T 3b43_A 71 SDVGEYTCKAENSVGAVASSAVLVIKE 97 (570)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEEEECC
T ss_pred hhCEEEEEEEEeCCceEEEEEEEEECC
Confidence 99999999995 445555556666543
No 380
>3zyi_A Leucine-rich repeat-containing protein 4; cell adhesion, LRRC4 complex, synapse; HET: NAG; 2.60A {Homo sapiens} PDB: 3zyo_A* 3zyn_A* 2dl9_A
Probab=99.36 E-value=6.5e-13 Score=100.26 Aligned_cols=89 Identities=13% Similarity=0.104 Sum_probs=65.9
Q ss_pred eecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEE
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (113)
.....+++.+|++++|.|.+. +.+.|.|+|.+ +.++... ..+.|+.+. .+.+|.|.+++.+|+|.|+|
T Consensus 357 ~~~~~~~v~~G~~~~l~C~~~--p~p~i~W~~~~-~~~~~~~----~~~~~~~~~-----~~g~L~i~~v~~~D~G~Y~C 424 (452)
T 3zyi_A 357 DAPRDLNISEGRMAELKCRTP--PMSSVKWLLPN-GTVLSHA----SRHPRISVL-----NDGTLNFSHVLLSDTGVYTC 424 (452)
T ss_dssp BCCCCEECCTTSCCEECCBCC--TTSEEEEECTT-SCEECSS----CCCSSCEEC-----TTSCEECSSCCTTCCEEEEE
T ss_pred cccccccccCCCEEEEEEeCC--CCCcEEEEeCC-CcEeccC----CCCCCEEEC-----CCCeEEEeecCHHHCEEEEE
Confidence 345668899999999999998 88899999854 3333211 124577764 34579999999999999999
Q ss_pred ee-cCCCCeeEEEEeceecccc
Q psy14080 91 QA-QPYTTTSHSQNAPGLGDLL 111 (113)
Q Consensus 91 ~~-~~~~~~s~~~~L~V~g~~~ 111 (113)
.+ +..+..+..+.|.|.+...
T Consensus 425 ~a~N~~G~~~~~~~l~v~~~~~ 446 (452)
T 3zyi_A 425 MVTNVAGNSNASAYLNVSTAGT 446 (452)
T ss_dssp EEECSSCEEEEEEEEEC-----
T ss_pred EEEcCCCcEEEEEEEEEEcccc
Confidence 99 4668889999999987643
No 381
>4f9l_D 20.1 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; HET: NAG; 3.14A {Mus musculus}
Probab=99.36 E-value=4.9e-12 Score=90.42 Aligned_cols=76 Identities=13% Similarity=0.179 Sum_probs=60.2
Q ss_pred EEecCCcEEEEEEEccCC--CCEEEEEecCCCe----E--EE-ec-ceEEc--CCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 17 TGFLAVFSYSDKTVRDIV--KVRVSWVRRRDWH----I--LT-SG-VLTYT--NDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 17 tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~~----~--l~-~~-~~~~~--~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
.+.+|+++.|.|.+++.. ++.++|+||.+++ + +. .+ ...+. -..||.+..+..++...|++.+++.||
T Consensus 142 lvkPG~Sl~LSC~aSG~tfs~y~~~WvRQaPGkgLEwvg~I~~~~g~t~Ya~svkGRfTISrD~s~nt~yLqm~sL~~eD 221 (259)
T 4f9l_D 142 LVKPGASVKLSCKASGYTFTRYYLYWVKQRPGQGLEWIGEINPNNGGTKFNEKFKSKATLTVDKSSRTTYIQLSSLTSED 221 (259)
T ss_dssp EEESSSCEEEEEEEESSCGGGSCEEEEEECTTSCEEEEEEECTTTCCEEECTTSTTTEEEEEETTTTEEEEEECSCCGGG
T ss_pred EECCCCcEEEEEeeeCCCcccCcEEEEEECCCCceEEEeEEeCCCCceEecHhhcCCEEEEEEccccEEEEEECCCChHH
Confidence 478999999999999764 5789999998642 2 11 11 22222 257999998888999999999999999
Q ss_pred CEEEEEee
Q psy14080 85 NGTYECQA 92 (113)
Q Consensus 85 ~G~Y~C~~ 92 (113)
+|+|+|+-
T Consensus 222 TAvYYCAr 229 (259)
T 4f9l_D 222 SAVYYCSR 229 (259)
T ss_dssp CEEEEEEE
T ss_pred CEEEEEEE
Confidence 99999986
No 382
>2pet_A Lutheran blood group glycoprotein; immunoglobulin superfamily., cell adhesion; 1.70A {Homo sapiens} PDB: 2pf6_A
Probab=99.36 E-value=8.7e-13 Score=89.80 Aligned_cols=94 Identities=14% Similarity=0.096 Sum_probs=64.1
Q ss_pred eecceEEEecCCcEEEEEEEccCCC-CEEEEEecCCC-e--EEEecce-------EEc----CCCCEEEEEeCCCCcEEE
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVK-VRVSWVRRRDW-H--ILTSGVL-------TYT----NDARFQVIHTDGSDDWNL 75 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~-~~V~W~k~~~~-~--~l~~~~~-------~~~----~~~R~~~~~~~~~~~~~L 75 (113)
..+.++++.+|+++.|+|.+.+.+. +.|.|+|.+.. . .+..+.. +.. ..++|.+. .+..|
T Consensus 5 ~~p~~~~v~~G~~v~L~C~~~~~~~~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~-----~~~~L 79 (231)
T 2pet_A 5 SVPPLVEVMRGKSVILDCTPTGTHDHYMLEWFLTDRSGARPRLASAEMQGSELQVTMHDTRGRSPPYQLD-----SQGRL 79 (231)
T ss_dssp CCCSEEEEETTCCEEECCCCBSCCSEEEEEEEEECTTCCCCEEEEEEEETTEEEEEECCCSCCSSCCEEC-----TTCCE
T ss_pred cCCCcEEEEcCCCEEEecccCCCCCceEEEEEEeCCCceeEEEEeccccCCccccccccccccccccccC-----CCceE
Confidence 4456788999999999999998874 89999987532 1 2221100 000 11222243 23349
Q ss_pred EEccCCCCCCEEEEEeecCC--CCeeEEEEeceecc
Q psy14080 76 QIKFLQKRDNGTYECQAQPY--TTTSHSQNAPGLGD 109 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~~~~--~~~s~~~~L~V~g~ 109 (113)
.|.+++.+|+|.|.|.+... +..+..+.|.|...
T Consensus 80 ~i~~v~~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 115 (231)
T 2pet_A 80 VLAEAQVGDERDYVCVVRAGAAGTAEATARLNVFAK 115 (231)
T ss_dssp EESSCCGGGCEEEEEEEECGGGCEEEEEEEEEEEBC
T ss_pred EEcccCcccCceEEEEEEecCCCceEEEEEEEEEec
Confidence 99999999999999999543 56677888888754
No 383
>2y25_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin-like D; 3.50A {Homo sapiens}
Probab=99.36 E-value=5.7e-12 Score=89.25 Aligned_cols=81 Identities=14% Similarity=0.095 Sum_probs=59.8
Q ss_pred eEEEecCCcEEEEEEEccC-CCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeec
Q psy14080 15 ISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQ 93 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 93 (113)
.+++.+|++++|.|.+.+. +.+.|.|+|. +..+ ..+.|+.+. .+..+|.|.+++.+|+|.|.|.+.
T Consensus 15 ~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~--~~~~-------~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~~~ 81 (317)
T 2y25_A 15 SWEVTGECNVLLKCKVANIKKETHIVWYKD--EREI-------SVDEKHDFK----DGICTLLITEFSKKDAGIYEVILK 81 (317)
T ss_dssp EEEEETTTEEEEEEEEESCCTTCEEEEEET--TEEE-------CCSCC---------CCEEEEETTCCSTTCSCEEEEEE
T ss_pred eEEECCCCeEEEEEEEcCCCCCCEEEEEEC--CeEc-------CCCCcEEEE----CCeEEEEEccCCcccCeEEEEEEE
Confidence 5899999999999999887 6789999984 3333 235566554 256899999999999999999995
Q ss_pred -CCCCeeEEEEeceec
Q psy14080 94 -PYTTTSHSQNAPGLG 108 (113)
Q Consensus 94 -~~~~~s~~~~L~V~g 108 (113)
..+..+..+.|.|..
T Consensus 82 n~~g~~~~~~~l~v~~ 97 (317)
T 2y25_A 82 DDRGKDKSRLKLVDEA 97 (317)
T ss_dssp SSSCEEEEEECCSTHH
T ss_pred CCCCcEEEEEEEEEec
Confidence 445556666776653
No 384
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.36 E-value=5.9e-12 Score=88.36 Aligned_cols=88 Identities=16% Similarity=0.069 Sum_probs=65.0
Q ss_pred eecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEE
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (113)
....++.+.+|++++|.|.+.+.+. .+.|+|.++..+ ..+.|+.+.. +....+|.|.+++.+|+|.|+|
T Consensus 9 ~~~~~~~v~~G~~v~l~C~~~~~p~-~v~W~~~~g~~~--------~~~~~~~~~~--~~~~~~L~i~~~~~~D~G~Y~C 77 (291)
T 2wim_A 9 ISLSKVELSVGESKFFTCTAIGEPE-SIDWYNPQGEKI--------ISTQRVVVQK--EGVRSRLTIYNANIEDAGIYRC 77 (291)
T ss_dssp ESCSEEEEETTCCEEEEEEEESCCS-EEECBCTTCCBC--------CCBTTEEEEE--ETTEEEEEECSCCGGGCEEEEE
T ss_pred EeccceEecCCCcEEEEEEEeCCCC-ceEEECCCCcCc--------cCCCcEEEec--CCCEEEEEEccCCcccCEEEEE
Confidence 3445689999999999999998764 899998543222 2356887763 2346799999999999999999
Q ss_pred eecC-CCCe-eEEEEeceecc
Q psy14080 91 QAQP-YTTT-SHSQNAPGLGD 109 (113)
Q Consensus 91 ~~~~-~~~~-s~~~~L~V~g~ 109 (113)
.+.. .+.. +..+.|.|...
T Consensus 78 ~~~n~~g~~~~~~~~l~v~~~ 98 (291)
T 2wim_A 78 QATDAKGQTQEATVVLEIYQK 98 (291)
T ss_dssp EEECSSSCEEEEEEEEEEECC
T ss_pred EEecccCceEEEEEEEEecCC
Confidence 9954 3333 56677777543
No 385
>2ny1_B T-cell surface glycoprotein CD4; HIV, GP120, CD4, viral protein-immune system compl; HET: NAG SUC; 1.99A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 2nxz_B* 2ny0_B* 2nxy_B* 2ny2_B* 2ny3_B* 2ny4_B* 2ny5_C* 2ny6_B* 3jwd_C* 3jwo_C* 1g9m_C* 1g9n_C* 1gc1_C* 1rzj_C* 1rzk_C* 3o2d_A 3cd4_A 3lqa_C* 2b4c_C* 2qad_B* ...
Probab=99.36 E-value=4.1e-12 Score=84.36 Aligned_cols=77 Identities=12% Similarity=-0.003 Sum_probs=61.4
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
.....+.+|++++|.|.+.+.+.+.+.|+|... +... ...+|.|.+++.+|+|.|+|.+
T Consensus 104 ~~~~~v~~g~~~~l~C~~~~~p~~~v~W~~~~~---------------~~~~------~~~~L~i~~v~~~d~G~Y~C~a 162 (184)
T 2ny1_B 104 NSDTHLLQGQSLTLTLESPPGSSPSVQCRSPRG---------------KNIQ------GGKTLSVSQLELQDSGTWTCTV 162 (184)
T ss_dssp SSCSEEETTCCEEEEEECCTTCCCEEEEECTTS---------------CEEE------ESSEEEESSCCGGGCEEEEEEE
T ss_pred CCCceeecCCCEEEEEEcCCCCCCEEEEEeCCC---------------cccc------CceEEEEecCCcCCCeEEEEEE
Confidence 344578999999999999888889999997431 1111 2569999999999999999999
Q ss_pred c-CCCCeeEEEEeceeccc
Q psy14080 93 Q-PYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 93 ~-~~~~~s~~~~L~V~g~~ 110 (113)
. .....+..+.|.|.|..
T Consensus 163 ~n~~~~~~~~~~l~V~~~p 181 (184)
T 2ny1_B 163 LQNQKKVEFKIDIVVLAFQ 181 (184)
T ss_dssp EETTEEEEEEEEEEEECCC
T ss_pred EECCceEEEEEEEEEEecC
Confidence 5 45677888999998864
No 386
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.36 E-value=5.5e-12 Score=84.18 Aligned_cols=91 Identities=22% Similarity=0.156 Sum_probs=61.8
Q ss_pred eecceEEEecCCcEEEEEEEc-cCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCC-C----cEEEEEccCCCCC
Q psy14080 11 AFGQISTGFLAVFSYSDKTVR-DIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGS-D----DWNLQIKFLQKRD 84 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~-~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~-~----~~~L~I~~v~~~D 84 (113)
...+++++.+|++++|.|.+. +.+.+.|.|+|. +..+..+. ..|+.+....+. . ..+|.|.+++.+|
T Consensus 7 ~~p~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~--g~~l~~~~-----~~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d 79 (195)
T 2c5d_C 7 GNPGNITGARGLTGTLRCQLQVQGEPPEVHWLRD--GQILELAD-----STQTQVPLGEDEQDDWIVVSQLRITSLQLSD 79 (195)
T ss_dssp ECCCCEEECTTCCEEEEEEEEEESSCCCCEEEET--TEECCSCE-----EEEEEEECSSSTTSEEEEEEEEEESSCCSTT
T ss_pred cChhheEEecCCcEEEecccccCCCCcEEEEEEC--CEEcccCC-----CCceEEEEccccccceeeccEEEEEeccccC
Confidence 345678999999999999999 888889999983 33332110 124444321111 1 4699999999999
Q ss_pred CEEEEEeecCC-C-CeeEEEEeceec
Q psy14080 85 NGTYECQAQPY-T-TTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~-~-~~s~~~~L~V~g 108 (113)
+|.|.|.+... + ..+..+.|.|..
T Consensus 80 ~G~Y~C~~~~~~~~~~~~~~~l~V~~ 105 (195)
T 2c5d_C 80 TGQYQCLVFLGHQTFVSQPGYVGLEG 105 (195)
T ss_dssp CEEEEEEEEETTEEEECCCEEEEECC
T ss_pred CcEEEEEEEeCCCceecccEEEEEec
Confidence 99999999543 2 223446676654
No 387
>2xot_A Amphoterin-induced protein 1; cell adhesion, neuronal protein, neurite growth regulation; HET: NAG BMA; 2.00A {Mus musculus}
Probab=99.36 E-value=1.9e-12 Score=95.46 Aligned_cols=84 Identities=17% Similarity=0.142 Sum_probs=65.1
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
...+++.+|++++|.|.+.+ +.+.|.|+|.++. ++... ..+.|+.+ . +.+|.|.+++.+|+|.|+|.+
T Consensus 253 ~~~v~v~~G~~~~l~C~~~g-p~p~i~W~~~~~~-~~~~~----~~~~r~~~-~-----~~~L~I~~v~~~D~G~Y~C~a 320 (361)
T 2xot_A 253 ESAWEAHLGDTLTIRCDTKQ-QGMTKVWVSPSNE-QVLSQ----GSNGSVSV-R-----NGDLFFKKVQVEDGGVYTCYA 320 (361)
T ss_dssp CCCCEEETTCCEEECCCCSS-TTCEEEEECTTSC-BCCSC----CSSSSEEE-E-----TTEEEESSCCTTSCEEEEEEE
T ss_pred ccCceecCCCeEEEEeEeeC-CCCeEEEEeCCCe-eEeec----ccCCceEe-e-----cCeEEEeecCcccCEEEEEEE
Confidence 35678999999999999998 8889999985432 22111 13458877 2 447999999999999999999
Q ss_pred c-CCCCeeEEEEeceec
Q psy14080 93 Q-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 93 ~-~~~~~s~~~~L~V~g 108 (113)
. ..+..+..+.|.|.+
T Consensus 321 ~N~~g~~~~~~~l~V~~ 337 (361)
T 2xot_A 321 MGETFNETLSVELKVYN 337 (361)
T ss_dssp ECSSCEEEEEEEEEEES
T ss_pred ecCCCccEEEEEEEEEe
Confidence 5 556778888998865
No 388
>2wim_A N-CAM 2, NCAM2, neural cell adhesion molecule 2; cell membrane, transmembrane, immunoglobulin; HET: NDG NAG; 3.00A {Homo sapiens}
Probab=99.36 E-value=1.5e-12 Score=91.41 Aligned_cols=83 Identities=12% Similarity=0.167 Sum_probs=63.5
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-c
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA-Q 93 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-~ 93 (113)
...+.+|+++.|.|.+.+.+.+.+.|+|. +..+ ..+.|+.+. ....+|.|.+++.+|+|.|.|.+ +
T Consensus 203 ~~~~~~g~~~~l~C~~~g~p~p~v~W~~~--g~~~-------~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a~N 269 (291)
T 2wim_A 203 NATAERGEEMTFSCRASGSPEPAISWFRN--GKLI-------EENEKYILK----GSNTELTVRNIINSDGGPYVCRATN 269 (291)
T ss_dssp ECCSSSCCEEEEECBCCCBSCCEEEEEET--TEEC-------CCTTTEEEC----STTCEEEEESCCSTTCEEEEEEEEE
T ss_pred cceecCCCeEEEEEEeecCCCCeEEEEEC--CEEC-------cCCccEEEc----CCccEEEEeeCCcccCEEEEEEEEE
Confidence 45677899999999999888899999984 3332 235677653 23568999999999999999999 5
Q ss_pred CCCCeeEEEEeceeccc
Q psy14080 94 PYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 94 ~~~~~s~~~~L~V~g~~ 110 (113)
..+..+..+.|.|.+-.
T Consensus 270 ~~G~~~~~~~l~v~~~~ 286 (291)
T 2wim_A 270 KAGEDEKQAFLQVFVQH 286 (291)
T ss_dssp TTEEEEEEEEEEC----
T ss_pred CCCceeeeEEEEEEEec
Confidence 66888888999887643
No 389
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.36 E-value=3.6e-12 Score=92.91 Aligned_cols=86 Identities=17% Similarity=0.113 Sum_probs=65.5
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+.......+.+.+|+++.|.|.+.+.+.+.|.|+|. +..+ .++|+.+. +. +|.|.+++.+|
T Consensus 308 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~v~W~~~--g~~~--------~~~~~~~~-----~~-~L~i~~~~~~d 371 (395)
T 1bih_A 308 APKYEQKPEKVIVVKQGQDVTIPCKVTGLPAPNVVWSHN--AKPL--------SGGRATVT-----DS-GLVIKGVKNGD 371 (395)
T ss_dssp EEEEEECCCSEEEECTTSCEEEECEEEEESCCCCEEEET--TEEC--------CSSSEEEE-----TT-EEEESSCCSTT
T ss_pred CCccccCCCcceEecCCCeEEEEEEECcccCCeeEEEEC--CEEC--------CCCceEEE-----CC-EEEEeeCCccc
Confidence 333333333337889999999999999988889999984 3332 24488765 12 99999999999
Q ss_pred CEEEEEee-cCCCCeeEEEEece
Q psy14080 85 NGTYECQA-QPYTTTSHSQNAPG 106 (113)
Q Consensus 85 ~G~Y~C~~-~~~~~~s~~~~L~V 106 (113)
+|.|+|.+ +..+..+..+.|.|
T Consensus 372 ~G~Y~C~a~N~~G~~~~~~~l~V 394 (395)
T 1bih_A 372 KGYYGCRATNEHGDKYFETLVQV 394 (395)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEE
T ss_pred CEEEEEEEEccCCCceEEEEEEE
Confidence 99999999 56677788888877
No 390
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.35 E-value=9.6e-12 Score=87.63 Aligned_cols=89 Identities=11% Similarity=0.056 Sum_probs=61.3
Q ss_pred ceEEEecCCcEEEEEEEccCCCCE-EEEEecCCCeE--EEec-ceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVR-VSWVRRRDWHI--LTSG-VLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~-V~W~k~~~~~~--l~~~-~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
....+.+|+++.|.|.+.+.+.+. +.|+|...... +... ...+. .++... ...+|.|.+++.+|+|.|.
T Consensus 196 ~~~~v~~G~~v~l~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~~~~L~I~~v~~~d~G~Y~ 268 (290)
T 2o26_X 196 TSHLLKKGDTFTVVCTIKDVSTSVNSMWLKMNPQPQHIAQVKHNSWHR--GDFNYE-----RQETLTISSARVDDSGVFM 268 (290)
T ss_dssp SBCCCCTTCCEEEEEEEEESSTTCEEEEEEESSSEEECCCEECCEEEE--ETTEEE-----EEEEEEESSCCSSSCEEEE
T ss_pred CcceEecCCcEEEEEEEecCCcceeEEEecCCCCCccceeeccccccc--CceeeE-----EEEEEEEcCCCcccCeEEE
Confidence 345789999999999999888876 99999653310 1110 00011 111111 3569999999999999999
Q ss_pred Eee-cCCCCeeEEEEeceecc
Q psy14080 90 CQA-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 90 C~~-~~~~~~s~~~~L~V~g~ 109 (113)
|.+ +..+..+..+.|.|.+.
T Consensus 269 C~a~N~~g~~~~~~~l~V~~~ 289 (290)
T 2o26_X 269 CYANNTFGSANVTTTLKVVEK 289 (290)
T ss_dssp EEEECSSCEEEEEEEECC---
T ss_pred EEEeCCCCcEEEEEEEEEEeC
Confidence 999 45677888999999763
No 391
>1qgc_4 Protein (immunoglobulin); virus-antibody complex, icosahedral virus, virus-immune SYST complex; 30.00A {Mus musculus} SCOP: i.6.1.1
Probab=99.35 E-value=5.2e-12 Score=93.52 Aligned_cols=98 Identities=17% Similarity=0.119 Sum_probs=68.1
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCC----CEEEEEecCC---CeEEEecceEE--cCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVK----VRVSWVRRRD---WHILTSGVLTY--TNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~----~~V~W~k~~~---~~~l~~~~~~~--~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
+++.+..+++.+|++++|+|.+.+.+. +.|.|||... ...+....... ...+||.+.. +.+.++|+|.+
T Consensus 4 v~~~p~~~~v~~G~~v~L~C~~~~~~~~~~~~~v~W~k~~~g~~~~~~~~~~~~~~~~~~~r~~~~~--~~~~~~L~I~~ 81 (438)
T 1qgc_4 4 LTQSPASLAVSLGQRATISCRASESVDSSGHSFMHWYQQKPGQPPKLLIYRASNLESGIPDRFSGSG--SRTDFTLTIDP 81 (438)
T ss_dssp EEEECSEEEECTTSCEEEEEEESSCCEETTEECEEEEEECTTSCCEEEESSSSCBCSSCCTTEEEEE--ETTEEEEEESS
T ss_pred eEecCCeEEeeCCCCEEEEEecCCCcccCCcceEEEEEECCCCCcEEEEEECcccCCCccCcEEEEc--cCCcEEEEeCC
Confidence 455677889999999999999987765 4899999752 22222211111 1257998764 34678999999
Q ss_pred CCCCCCEEEEEeecCC-C-CeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQPY-T-TTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~-~-~~s~~~~L~V~g 108 (113)
++.+|+|.|+|.+... + ..+..+.|.|.+
T Consensus 82 v~~~D~G~Y~C~a~n~~~~~~~~~~~l~V~~ 112 (438)
T 1qgc_4 82 VEADDVATYYCQQSNEVPLTFGAGTKLDLKR 112 (438)
T ss_dssp CCGGGCEEEEEEECSSTTCCBCCCEEEEECC
T ss_pred CcCcCCeeEEEEEecCCCccccCceeEEecC
Confidence 9999999999999543 2 223445666643
No 392
>1f97_A Junction adhesion molecule; immunoglobulin superfamily, beta-sandwich fold, cell adhesion; 2.50A {Mus musculus} SCOP: b.1.1.1 b.1.1.4
Probab=99.34 E-value=1.9e-12 Score=86.76 Aligned_cols=90 Identities=19% Similarity=0.185 Sum_probs=62.5
Q ss_pred EEEecCCcEEEEEE-EccCCCCEEEEEecCCCeEEEecce--EEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 16 STGFLAVFSYSDKT-VRDIVKVRVSWVRRRDWHILTSGVL--TYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 16 ~tv~~G~~a~L~C~-v~~~~~~~V~W~k~~~~~~l~~~~~--~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
..+.+|+++.|.|. +.+.+.+.+.|+|... ..+..+.. ....+.++... ....+|.|.+++.+|+|.|+|.+
T Consensus 114 ~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~~-~~l~~~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~a 188 (212)
T 1f97_A 114 SSVTIGNRAVLTCSEHDGSPPSEYSWFKDGI-SMLTADAKKTRAFMNSSFTID----PKSGDLIFDPVTAFDSGEYYCQA 188 (212)
T ss_dssp SEEETTSCEEEEEECSCCBSCCEEEEEETTE-ESBC-----CBSCSSSCEEEC----TTTCCEEESSCCGGGCEEEEEEE
T ss_pred cccCCCCeEEEEEEcccCcCCCEEEEEeCCc-ccccccccccccccCceeEec----CCCceEEEEecChhhCcEEEEEE
Confidence 56889999999999 6788888999998542 02221111 01123455543 24568999999999999999999
Q ss_pred c-CCCCe--eEEEEeceeccc
Q psy14080 93 Q-PYTTT--SHSQNAPGLGDL 110 (113)
Q Consensus 93 ~-~~~~~--s~~~~L~V~g~~ 110 (113)
. ..+.. +..+.|.|.+..
T Consensus 189 ~n~~g~~~~s~~~~l~V~~~~ 209 (212)
T 1f97_A 189 QNGYGTAMRSEAAHMDAVELN 209 (212)
T ss_dssp ECSSSCCEECCCEEEEEESSC
T ss_pred ccccCCccccceEEEEEEEee
Confidence 5 44544 678888887643
No 393
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.34 E-value=3.9e-12 Score=86.26 Aligned_cols=85 Identities=13% Similarity=0.225 Sum_probs=62.6
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeec
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQ 93 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 93 (113)
..+++.+|++++|.|.+.+.+.+.|.|+|. +..+..+. ...++... .+.++|.|.+++.+|+|.|+|.+.
T Consensus 27 ~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~--~~~~~~~~----~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~~~ 96 (231)
T 3ojm_B 27 RLHAVPAANTVKFRCPAGGNPMPTMRWLKN--GKEFKQEH----RIGGYKVR----NQHWSLIMESVVPSDKGNYTCVVE 96 (231)
T ss_dssp SCEEEETTSCEEEECCEEEESCCEEEEEET--TEECCGGG----STTCCEEE----GGGTEEEECSCCGGGCEEEEEEEE
T ss_pred eeEEEccCCCEEEEEecccCCCCeEEEEEC--Cccccccc----cccceeee----cCcceEEEecCCcccCEEEEEEEe
Confidence 567899999999999999888889999984 33322110 11222332 246799999999999999999995
Q ss_pred -CCCCeeEEEEeceec
Q psy14080 94 -PYTTTSHSQNAPGLG 108 (113)
Q Consensus 94 -~~~~~s~~~~L~V~g 108 (113)
..+..+..+.|.|..
T Consensus 97 n~~~~~~~~~~l~V~~ 112 (231)
T 3ojm_B 97 NEYGSINHTYHLDVVE 112 (231)
T ss_dssp ETTEEEEEEEEEEEEC
T ss_pred cccCcccccEEEEEEc
Confidence 445667778888765
No 394
>2v5t_A NCAM2, N-CAM 2, neural cell adhesion molecule 2; phosphorylation, immunoglobulin domain, membrane, glycoprote adhesion, transmembrane; HET: NAG; 2.00A {Homo sapiens}
Probab=99.34 E-value=6.6e-12 Score=82.83 Aligned_cols=85 Identities=20% Similarity=0.175 Sum_probs=59.3
Q ss_pred eecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEE
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (113)
....+.++.+|+++.|.|.+.+.+.+.+.|+|... .+.. ..+.|+... .+.+|.|.+++.+|+|.|.|
T Consensus 7 ~~~~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~~-~~~~------~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C 74 (189)
T 2v5t_A 7 EVVSPQEFKQGEDAEVVCRVSSSPAPAVSWLYHNE-EVTT------ISDNRFAML-----ANNNLQILNINKSDEGIYRC 74 (189)
T ss_dssp ECCSSEEEETTSCEEECCEEECSSCCEEEEEC------CB------CCCTTEEEC-----TTSCEEETTCCGGGCEEEEE
T ss_pred ccCCCEEEeCCCcEEEEEEEcCCCCCEEEEEECCc-ccee------ccCCeEEEe-----cCCCEEEeeCCHhHCcEEEE
Confidence 34456789999999999999988888999998532 2211 136788765 24579999999999999999
Q ss_pred eecCC-CC--eeEEEEecee
Q psy14080 91 QAQPY-TT--TSHSQNAPGL 107 (113)
Q Consensus 91 ~~~~~-~~--~s~~~~L~V~ 107 (113)
.+... .. .+..+.|.|.
T Consensus 75 ~~~~~~~~~~~~~~~~l~v~ 94 (189)
T 2v5t_A 75 EGRVEARGEIDFRDIIVIVN 94 (189)
T ss_dssp EEEETTTTEEEEEEEEEEEE
T ss_pred EEEEcCCCceEEEEEEEEec
Confidence 99533 22 2344555544
No 395
>2y23_A Myomesin; structural protein, sarcomere, M-BAND, immunoglobulin- like; 2.50A {Homo sapiens}
Probab=99.34 E-value=2.7e-11 Score=85.53 Aligned_cols=81 Identities=11% Similarity=-0.002 Sum_probs=62.1
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEc-cCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVR-DIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~-~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
++.+.........+.+|+++.|.|.+. +.+.+.+.|+|. +..+ ....||.+..+...+..+|.|.+++.+
T Consensus 106 ~p~~~~~~~~~~~v~~G~~v~l~C~~~~~~p~~~v~W~~~--~~~i-------~~~~~~~~~~~~~~~~~~L~i~~~~~~ 176 (312)
T 2y23_A 106 FPTVPVKSELAVEILEKGQVRFWMQAEKLSGNAKVNYIFN--EKEI-------FEGPKYKMHIDRNTGIIEMFMEKLQDE 176 (312)
T ss_dssp SCBCCEEEEEEEEECSSSCEEEEEEESCCCSSCEEEEEET--TEEE-------CSSSSCEEEEETTTTEEEEEESCCCGG
T ss_pred CCccccccCCceEEeeCCCEEEEEEEEeCCCCCEEEEEEC--CEEC-------eeCCcEEEEEccCCCEEEEEEccCCcc
Confidence 333333333478899999999999999 778899999984 3333 245788777555567788999999999
Q ss_pred CCEEEEEeecC
Q psy14080 84 DNGTYECQAQP 94 (113)
Q Consensus 84 D~G~Y~C~~~~ 94 (113)
|+|.|.|.+..
T Consensus 177 d~G~Y~C~~~~ 187 (312)
T 2y23_A 177 DEGTYTFQLQD 187 (312)
T ss_dssp GCEEEEEEEES
T ss_pred cCEeEEEEEEe
Confidence 99999999964
No 396
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.34 E-value=9.1e-12 Score=83.65 Aligned_cols=90 Identities=12% Similarity=-0.055 Sum_probs=61.5
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+..++..... .+.+|++++|.|.+.+ +.+.+.|+|....... + +.. ........+|.|.+++.+|
T Consensus 4 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~~~~---------~-~~~--~~~~~~~~~L~i~~v~~~D 69 (196)
T 3p2t_A 4 PKPTLWAEPGS-VISWGNSVTIWCQGTL-EAREYRLDKEESPAPW---------D-RQN--PLEPKNKARFSIPSMTEDY 69 (196)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETTSCSCS---------E-EEC--CCSSSSEEEEEESSCCGGG
T ss_pred CCCEEEccCCC-cCCCCCcEEEEeeCCC-CCCEEEEEECCCCCcc---------c-ccc--cccCCceEEEEeccCCccc
Confidence 45555555555 8899999999999988 5679999985421100 0 000 0012346799999999999
Q ss_pred CEEEEEeecC-CC--CeeEEEEeceec
Q psy14080 85 NGTYECQAQP-YT--TTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~-~~--~~s~~~~L~V~g 108 (113)
+|.|.|.+.. .+ ..+..+.|.|.+
T Consensus 70 ~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 96 (196)
T 3p2t_A 70 AGRYRCYYRSPVGWSQPSDPLELVMTG 96 (196)
T ss_dssp CEEEEEEEEETTEEBCCCCCEEEEEEC
T ss_pred CceEEEEEeCCCcccCCCccEEEEecC
Confidence 9999999953 32 345667777765
No 397
>2fbo_J V1V2;, variable region-containing chitin-binding protein 3; immunoglobulin, VCBP, V-type, V SET, immune system; 1.85A {Branchiostoma floridae}
Probab=99.33 E-value=3.5e-12 Score=87.74 Aligned_cols=96 Identities=14% Similarity=0.134 Sum_probs=61.0
Q ss_pred ceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCe---------EEEe----cceEEcC--CCCEEEEEeCCC
Q psy14080 6 GGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWH---------ILTS----GVLTYTN--DARFQVIHTDGS 70 (113)
Q Consensus 6 ~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~---------~l~~----~~~~~~~--~~R~~~~~~~~~ 70 (113)
+.+.......+.+.+|+++.|.|.+.+.+.+.|.|||..... .+.. +...... ..|....
T Consensus 136 ~~~~~~~~~~~~v~~g~~v~L~C~~~g~p~p~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 210 (250)
T 2fbo_J 136 NNVHVSTAEVVQVDEGNDITMTCPCTDCANANVTWYTGPTFFENYETGTYQPLANKNQFGITWFSSEIAGRASFS----- 210 (250)
T ss_dssp SCCEECCCSEEECCTTCCEEECCCEESCTTCEEEEEEEEECSSCSSSCEEEEEEEECTTSCEEECTTTTTSEEEE-----
T ss_pred CeEEEecCceEEecCCCcEEEEEEecCCCCCeeEEEeCCCcccccccCcceeEeccCCCCccccCceEecccccC-----
Confidence 344444555677888999999999999888899999964210 0000 0000000 1122211
Q ss_pred CcEEEEEccCCCCCCEEEEEeecC-C---CCeeEEEEece
Q psy14080 71 DDWNLQIKFLQKRDNGTYECQAQP-Y---TTTSHSQNAPG 106 (113)
Q Consensus 71 ~~~~L~I~~v~~~D~G~Y~C~~~~-~---~~~s~~~~L~V 106 (113)
+..+|.|.+++.+|+|.|+|.+.. . +..+..+.|.|
T Consensus 211 ~~~~L~i~~v~~~D~G~Y~C~a~N~~g~~g~~~~~~~l~V 250 (250)
T 2fbo_J 211 GARNLVIRAAKITDAGRVWCELATGQGELDADRSSTILKV 250 (250)
T ss_dssp TTTEEEECSCCGGGCEEEEEEEESSSSGGGEEEEEEEEEC
T ss_pred CccEEEEecCCcccCEEEEEEecCCccccCccceeEEEeC
Confidence 346999999999999999999954 2 34455666554
No 398
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.33 E-value=3.6e-12 Score=90.51 Aligned_cols=93 Identities=13% Similarity=0.148 Sum_probs=61.3
Q ss_pred ceEEEecCCcEEEEEEEccCC-CCEEEEEecCCC--eEE-Eec-c--eEE--cCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRDW--HIL-TSG-V--LTY--TNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~--~~l-~~~-~--~~~--~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
.++++.+|++|+|.|.+.... .+.|.|+|.++. ..+ ... . ... ....|+.+. +...++++|+|.+++.+|
T Consensus 7 p~vtv~~G~~v~L~C~v~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~-~~~~~~~sL~I~~v~~~D 85 (308)
T 4fom_A 7 PHVTAVWGKNVSLKCLIEVNETITQISWEKIHGKSSQTVAVHHPQYGFSVQGEYQGRVLFK-NYSLNDATITLHNIGFSD 85 (308)
T ss_dssp CSCEEETTSCEEECCBCCCSSCEEEEEEEEESSSCEEEEEEECSSSCEEECTTTTTTEEES-CCSSSBCCEEECSCCGGG
T ss_pred CEeEEEcCCcEEEEEEecCCCCCcEEEEEECCCCCCceEEEecCCCCceecCcccceEEee-ccCCCceEEEEccCCHHH
Confidence 457899999999999997543 356999997642 111 111 0 111 124576653 234467899999999999
Q ss_pred CEEEEEeecCC--CCeeEEEEecee
Q psy14080 85 NGTYECQAQPY--TTTSHSQNAPGL 107 (113)
Q Consensus 85 ~G~Y~C~~~~~--~~~s~~~~L~V~ 107 (113)
+|.|+|.+... +..+..+.+.+.
T Consensus 86 ~G~Y~C~a~n~~~~~~~~~~~~~v~ 110 (308)
T 4fom_A 86 SGKYICKAVTFPLGNAQSSTTVTVL 110 (308)
T ss_dssp CEEEEEEEEETTTEEEEEEEEEEEE
T ss_pred CEEEEEEEeeCCCcceeeeeEEEee
Confidence 99999999543 344455555544
No 399
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.33 E-value=1.9e-12 Score=87.59 Aligned_cols=87 Identities=18% Similarity=0.224 Sum_probs=59.7
Q ss_pred ceEEEecCCcEEEEEEE-ccCCCCEEEEEecCCCeEEEec-ceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 14 QISTGFLAVFSYSDKTV-RDIVKVRVSWVRRRDWHILTSG-VLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v-~~~~~~~V~W~k~~~~~~l~~~-~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
....+.+|+++.|.|.+ .+.+.+.+.|+|. +..+... ...+..+.|+... .+.+|.|.+++.+|+|.|+|.
T Consensus 116 ~~~~~~~g~~v~l~C~~~~g~p~~~v~W~~~--g~~~~~~~~~~~~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~ 188 (217)
T 2vr9_A 116 KDTRVAKGETALLECGPPKGIPEPTLIWIKD--GVPLDDLKAMSFGASSRVRIV-----DGGNLLISNVEPIDEGNYKCI 188 (217)
T ss_dssp CCEEECTTSCEEECCBCCCEESCCEEEEEET--TEEECCCCCC---CCCSEEEE-----TTTEEEESSCCSTTCEEEEEE
T ss_pred CccEEcCCCeEEEEEECCCCCCCCeEEEEEC--CcCCCcccccccccCCcEEec-----CCCcEEEeeCCHHHCeEEEEE
Confidence 45678999999999999 7888889999984 3333211 1112245677665 244899999999999999999
Q ss_pred ec-CCCCeeEE-EEecee
Q psy14080 92 AQ-PYTTTSHS-QNAPGL 107 (113)
Q Consensus 92 ~~-~~~~~s~~-~~L~V~ 107 (113)
+. ..+..+.. +.|.+.
T Consensus 189 a~N~~G~~~~~~~~lv~~ 206 (217)
T 2vr9_A 189 AQNLVGTRESSYAKLIVQ 206 (217)
T ss_dssp EEETTEEEECCCEEEEEC
T ss_pred EEcccceeccccEEEEEE
Confidence 94 44544333 344443
No 400
>3b43_A Titin; I-SET IG fold, extended poly-IG filament, elastic FIL structural protein; 3.30A {Oryctolagus cuniculus}
Probab=99.33 E-value=1.3e-11 Score=95.26 Aligned_cols=94 Identities=14% Similarity=0.216 Sum_probs=71.4
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+.+.........+.+|+++.|.|.+.+.+.+.|.|+|.. ..+ ....|+.+... .....|.|.+++.+
T Consensus 289 ~~p~~~~~~~~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~~--~~l-------~~~~~~~~~~~--~~~~~L~i~~v~~~ 357 (570)
T 3b43_A 289 EPPRFIKKLEPSRIVKQDEHTRYECKIGGSPEIKVLWYKDE--TEI-------QESSKFRMSFV--ESVAVLEMYNLSVE 357 (570)
T ss_dssp CCCEEEECCCSBCCEESSCEEEEEEEEESSSSCEEEEEETT--EEC-------CCSSSEEEEEE--TTEEEEEEESCCGG
T ss_pred cCCcccccCCCccEEcCCCcEEEEEEEeeCCCCEEEEeECC--EEC-------CCCCcEEEEEE--CCEEEEEECCCCcc
Confidence 45555555555556889999999999999999999999843 222 23456665432 34678999999999
Q ss_pred CCEEEEEee-cCCCCeeEEEEeceec
Q psy14080 84 DNGTYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
|+|.|.|.+ +..+..+..+.|.|..
T Consensus 358 D~G~Y~C~a~N~~g~~~~~~~l~V~~ 383 (570)
T 3b43_A 358 DSGDYTCEAHNAAGSASSSTSLKVKE 383 (570)
T ss_dssp GCEEEEEEEEBTTBCCEEEEEECEEC
T ss_pred cCEEEEEEEEeCCCEEEEEEEEEecC
Confidence 999999999 5567777888898875
No 401
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.33 E-value=4.2e-13 Score=91.17 Aligned_cols=95 Identities=8% Similarity=0.043 Sum_probs=64.3
Q ss_pred ceEEEecCCcEEEEEEEccCCC-----CEEEEEecCCCe-EEEec-ceE--EcCCCCEEEEEe-CCCCcEEEEEccCCCC
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVK-----VRVSWVRRRDWH-ILTSG-VLT--YTNDARFQVIHT-DGSDDWNLQIKFLQKR 83 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~-----~~V~W~k~~~~~-~l~~~-~~~--~~~~~R~~~~~~-~~~~~~~L~I~~v~~~ 83 (113)
+.+++.+|++++|+|.+.+.+. +.|.|+|.+... ++... ... ....+|+.+..+ ...++++|.|.+++.+
T Consensus 3 ~~v~~~~G~~v~L~C~~~~~~~~~~~~~~v~W~~~~~~~~i~~~~~~~~~~~~~~~r~~~~~~~~~~~~~sL~I~~v~~~ 82 (222)
T 4i0k_A 3 DPVVALVDTDATLRCSFSPEPGFSLAQLNLIWQLTDTKQLVHSFTEGRDQGSAYSNRTALFPDLLVQGNASLRLQRVRVT 82 (222)
T ss_dssp CCCCCCTTSCEEECCBCCCCTTCCTTTEEEEEEETTTCCEEEEEETTEEEEESSCSCEECCTTTGGGTBCCEEECSCCGG
T ss_pred CCEEEECCCCeEEEEEecCCCCCCCCceEEEEEECCCccEEEEEcCCcccccceeCcEEEecccccCCeEEEEECCcccc
Confidence 3467889999999999987643 689999976433 32221 111 122467765421 1224789999999999
Q ss_pred CCEEEEEeecCCCCeeEEEEeceec
Q psy14080 84 DNGTYECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~~~~~~s~~~~L~V~g 108 (113)
|+|.|+|.+......+..+.|.|.+
T Consensus 83 D~G~Y~C~~~~~~~~~~~~~l~V~~ 107 (222)
T 4i0k_A 83 DEGSYTCFVSIQDFDSAAVSLQVAA 107 (222)
T ss_dssp GCSCEEEEEEECCCCCCCCCCCCCB
T ss_pred cCEEEEEEEEeCCCceEEEEEEEEc
Confidence 9999999996544445556666654
No 402
>4f9p_D 103.2 anti-BTN3A1 antibody fragment; B7 superfamily, butyrophilin, CD277, immune system; 3.52A {Mus musculus}
Probab=99.33 E-value=4.9e-12 Score=90.11 Aligned_cols=82 Identities=13% Similarity=0.148 Sum_probs=62.4
Q ss_pred eecceEEEecCCcEEEEEEEccCC--CCEEEEEecCCCeE------EE-ecceE-Ec--CCCCEEEEEeCCCCcEEEEEc
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIV--KVRVSWVRRRDWHI------LT-SGVLT-YT--NDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~--~~~V~W~k~~~~~~------l~-~~~~~-~~--~~~R~~~~~~~~~~~~~L~I~ 78 (113)
+.|.. .+.+|+++.|.|++++.. ++.++|+||.+++- +. .+..+ +. -.+||.+..+..++...|++.
T Consensus 6 eSG~~-lvkPG~Sl~lSC~~SG~tf~~y~~~WvRQaPGkgLEWvg~I~~~~g~t~Y~~s~kgR~TiSrD~s~nt~yLqm~ 84 (254)
T 4f9p_D 6 QSGAE-VVRPGTSVKVSCKASGYAFTSYLIHWIKQRPGQGLEWIGVINPRSGDSHYNEKFKDRTTLTADQSSSTAYMQLS 84 (254)
T ss_dssp ECCCE-EECTTCCEEEEEEEESSCGGGCCEEEEEEETTTEEEEEEEEETTTTEEECCTTTTTTEEEEEETTTTEEEEEEC
T ss_pred eECCc-eECCCCCeEEEEEEeCCChhhCcEEEEEeCCCCCeEEEEEEcCCCCCEEECHHhCCCEEEeeccCCCcCeeEEc
Confidence 34433 478999999999999764 56899999986431 11 12222 22 247999998888999999999
Q ss_pred cCCCCCCEEEEEeec
Q psy14080 79 FLQKRDNGTYECQAQ 93 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~ 93 (113)
+++.||+|+|+|+-.
T Consensus 85 sL~~eDTAvYYCAr~ 99 (254)
T 4f9p_D 85 SLTSDDSAVYFCARS 99 (254)
T ss_dssp SCCGGGCEEEECEES
T ss_pred cCCCCCCEEEEEEec
Confidence 999999999999863
No 403
>1gsm_A Madcam-1, mucosal addressin cell adhesion molecule-1; cell adhesion protein, immunoglobulin fold, I-SET fold, cell adhesion glycoprotein; 1.9A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1bqs_A*
Probab=99.33 E-value=2e-11 Score=85.12 Aligned_cols=80 Identities=13% Similarity=-0.004 Sum_probs=60.6
Q ss_pred cceEEEecCCcEEEEEEEccCCCC--EEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEE
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKV--RVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~--~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (113)
..++++..|++++|.|.+ +.+.+ .|.|+|.+... +|.... .....|.|.+++.+|+|.|.|
T Consensus 14 ~~~v~v~~G~sv~L~C~a-~~p~P~~~i~W~~~~~~l------------~~~~~~----~~~~~L~I~~v~~~d~G~Y~C 76 (210)
T 1gsm_A 14 EPVVAVALGASRQLTCRL-ACADRGASVQWRGLDTSL------------GAVQSD----TGRSVLTVRNASLSAAGTRVC 76 (210)
T ss_dssp CSEEEEETTCCEEEEEEE-CCSSTTCEEEEESSTTTT------------CCEEEE----SSEEEEEECSCCGGGCEEEEE
T ss_pred CCceEEeCCCCEEEEEEC-CCCCCCcceEEeeccccc------------CcEEec----CCccEEEECccCcccCceEEE
Confidence 345799999999999999 77777 99999854210 222222 246789999999999999999
Q ss_pred eecCC-CCeeEEEEeceecc
Q psy14080 91 QAQPY-TTTSHSQNAPGLGD 109 (113)
Q Consensus 91 ~~~~~-~~~s~~~~L~V~g~ 109 (113)
.+... ...+..++|.|.+.
T Consensus 77 ~a~n~~~~~~~~~~ltV~~~ 96 (210)
T 1gsm_A 77 VGSCGGRTFQHTVQLLVYAF 96 (210)
T ss_dssp EEEETTEEEEEEEEEEEEBC
T ss_pred EEEeCCCceEEEEEEEEEec
Confidence 99644 45567889988763
No 404
>3f8u_B Tapasin; endoplasmic reticulum, glycoprotein, immunoglobulin domain, microsome, protein disulfide isomerase, thioredoxin-like FO like domain; HET: NAG; 2.60A {Homo sapiens}
Probab=99.32 E-value=1.4e-11 Score=93.29 Aligned_cols=95 Identities=12% Similarity=0.052 Sum_probs=62.4
Q ss_pred ceEEEecCCcEEEEEEEccCC--------------CCEEEEEecCCC---eEEEe-cceE--E-c-CCCCEEEE-EeC--
Q psy14080 14 QISTGFLAVFSYSDKTVRDIV--------------KVRVSWVRRRDW---HILTS-GVLT--Y-T-NDARFQVI-HTD-- 68 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~--------------~~~V~W~k~~~~---~~l~~-~~~~--~-~-~~~R~~~~-~~~-- 68 (113)
..+.+.+|++|+|+|.++..+ ...|.|||+..+ .++.+ +... . . ...|.... .++
T Consensus 166 ~sv~a~~Ge~vtL~C~~S~~~~~~~a~~~~~~~~~~~~V~Wyrq~pg~~~~vliY~~g~~~q~~~~~~g~~~f~~~~~~~ 245 (401)
T 3f8u_B 166 PAPRVRLGQDALLDLSFAYMPPTSEAASSLAPGPPPFGLEWRRQHLGKGHLLLAATPGLNGQMPAAQEGAVAFAAWDDDE 245 (401)
T ss_dssp SSCEEETTSCEEECCEEEECCCTTC------CCSCCCEEEEEEEETTEEEEEEEECTTSCCCCCCCCTTCEEEEEESCCC
T ss_pred CcEEEeCCCCEEEEEeCCCCcccccccccccccCCceEEEEEEecCCCCcEEEEEeCCCccccccccCCeEEEEeecccc
Confidence 347899999999999997432 468999999743 33333 2111 0 0 11222111 111
Q ss_pred ----CCCcEEEEEccCCCCCCEEEEEeecCC-CCeeEEEEeceec
Q psy14080 69 ----GSDDWNLQIKFLQKRDNGTYECQAQPY-TTTSHSQNAPGLG 108 (113)
Q Consensus 69 ----~~~~~~L~I~~v~~~D~G~Y~C~~~~~-~~~s~~~~L~V~g 108 (113)
..++.+|+|.+++.+|+|.|+|.+... ...+..+.|.|.+
T Consensus 246 ~~g~~~g~~sL~I~~v~~~D~G~Y~C~v~~~~~~~~~~v~L~V~~ 290 (401)
T 3f8u_B 246 PWGPWTGNGTFWLPRVQPFQEGTYLATIHLPYLQGQVTLELAVYK 290 (401)
T ss_dssp SSCCEEEEEEEEETTCCGGGCEEEEEEEEETTEEEEEEEEEEEEB
T ss_pred cccccCCcEEEEECcCCHhhCceEEEEEEecccceeEEEEEeecc
Confidence 136789999999999999999999643 3455667787765
No 405
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.32 E-value=8.6e-12 Score=83.71 Aligned_cols=90 Identities=9% Similarity=-0.059 Sum_probs=63.5
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCC----CeEEEec--ceE--Ec--CCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRD----WHILTSG--VLT--YT--NDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~----~~~l~~~--~~~--~~--~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
.+.+.+|++++|+|...+.+...|.|||... ..++... ... .. ...|+.+. .+.+|.|.+++.+|
T Consensus 8 ~~~v~~G~~v~L~C~~~~~~~~~v~W~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~r~~~~-----~~~~L~i~~v~~~D 82 (208)
T 3r4d_A 8 PPQVAEDNNVLLLVHNLPLALGAFAWYKGNTTAIDKEIARFVPNSNMNFTGQAYSGREIIY-----SNGSLLFQMITMKD 82 (208)
T ss_dssp SSEEETTCCEEEEEECCCSSCSEEEEEESSCCCGGGEEEEEEGGGTEEEECTTCCSSEEEC-----TTSCEEECSCCGGG
T ss_pred cceeecCCcEEEEEeCCCCCceEEEeccCCCCCccceEEEEecCCCccccCccccceeEEe-----cCCeEEEccccccC
Confidence 3578999999999997777778999998642 2232221 111 11 24577664 34589999999999
Q ss_pred CEEEEEeecCC--CCeeEEEEeceecc
Q psy14080 85 NGTYECQAQPY--TTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~~--~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+... ...+..+.|.|...
T Consensus 83 ~G~Y~C~~~~~~~~~~~~~~~l~V~~~ 109 (208)
T 3r4d_A 83 MGVYTLDMTDENYRRTQATVRFHVHQP 109 (208)
T ss_dssp CEEEEEEEECSSCEEEEEEEEEEEECC
T ss_pred CeEEEEEEEcccCceeEEEEEEEeccC
Confidence 99999999654 35567778888653
No 406
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.32 E-value=6.3e-12 Score=85.82 Aligned_cols=83 Identities=14% Similarity=0.061 Sum_probs=61.7
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCE-EEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVR-VSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~-V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
.|..++...+.+.++.+|++++|.|.+.+.+.+. +.|||. +..+. . ...+|.|.+++.
T Consensus 5 ~p~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~v~W~k~--g~~l~--------~-----------~~~~L~i~~v~~ 63 (204)
T 3sgj_C 5 LPKAVVFLEPQWYRVLEKDSVTLKCQGAYSPEDQSTQWFHN--ESLIS--------S-----------QASSYFIDAATV 63 (204)
T ss_dssp -CBCEEEEESCCSEEETTCCEEEEEECCSSSSCCCEEEEET--TEEES--------C-----------CSSEEEESSCCG
T ss_pred CCCCeEEEcCCCeEEECCCCEEEEEcCCCCCCCcEEEEEEC--CEEcc--------c-----------CccEEEEecccc
Confidence 3666677777778999999999999999876654 999984 22221 0 126999999999
Q ss_pred CCCEEEEEeecCCCCeeEEEEeceec
Q psy14080 83 RDNGTYECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~~~s~~~~L~V~g 108 (113)
+|+|.|.|.+.. ...+..+.|.|..
T Consensus 64 ~D~G~Y~C~a~n-~~~s~~~~l~V~~ 88 (204)
T 3sgj_C 64 DDSGEYRCQTQL-STLSDPVQLEVHI 88 (204)
T ss_dssp GGCEEEEEEETT-SBCCCCEEEEEEC
T ss_pred cCCEEEEEEeCC-CcccccEEEEEec
Confidence 999999999964 3445556776654
No 407
>3ojm_B Fibroblast growth factor receptor 2; beta trefoil motif, immunoglobulin-like domain, growth facto factor receptor, extracellular; 2.10A {Homo sapiens} PDB: 1nun_B* 3oj2_C 2fdb_P 1iil_E 1ev2_E 1e0o_B* 1ii4_E 1djs_A 3ojv_C* 1cvs_C 1fq9_C* 1evt_C
Probab=99.31 E-value=2.2e-12 Score=87.46 Aligned_cols=94 Identities=12% Similarity=0.107 Sum_probs=65.5
Q ss_pred eecceEEEecCCcEEEEEEEccCCCCEEEEEecC--CCeEEEecceEEcCCCCEEEEEe---CCCCcEEEEEccCCCCCC
Q psy14080 11 AFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRR--DWHILTSGVLTYTNDARFQVIHT---DGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 11 ~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~--~~~~l~~~~~~~~~~~R~~~~~~---~~~~~~~L~I~~v~~~D~ 85 (113)
.......+.+|+++.|.|.+.+.+.+.+.|+|.. ++..+..+ ...+...... ......+|.|.+++.+|+
T Consensus 123 ~~~~~~~~~~g~~~~l~C~~~~~p~p~v~W~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~L~i~~~~~~d~ 197 (231)
T 3ojm_B 123 GLPANASTVVGGDVEFVCKVYSDAQPHIQWIKHVEKNGSKYGPD-----GLPYLKVLKHSGINSSNAEVLALFNVTEADA 197 (231)
T ss_dssp TCSCCEEEETTCCEEEECCEECSSCCEEEEEEECCBTTBSBCTT-----SCBCEEEEEECSTTCSCTTEEEECSCCGGGC
T ss_pred ccCCceEEEeCCcEEEEEEEecCCCCEEEEEECCCCCCccccCC-----CcceEeEecccccccCCccEEEEecCCHHHC
Confidence 3456678999999999999999888899999942 12211110 0111111111 123446899999999999
Q ss_pred EEEEEeec-CCCCeeEEEEeceecc
Q psy14080 86 GTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 86 G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
|.|+|.+. ..+..+..+.|.|.+.
T Consensus 198 G~Y~C~a~n~~g~~~~~~~l~V~~~ 222 (231)
T 3ojm_B 198 GEYICKVSNYIGQANQSAWLTVLPK 222 (231)
T ss_dssp EEEEEEEEETTEEEEEEEEEEEECC
T ss_pred eEEEEEEEeccceEeeEEEEEEecC
Confidence 99999994 5567788899998764
No 408
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.31 E-value=5.3e-12 Score=88.50 Aligned_cols=87 Identities=14% Similarity=0.074 Sum_probs=61.8
Q ss_pred cCCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 3 AAPGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 3 ~~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
|.|+.+++..+..+++.+|++++|.|.+.+ .|.|++... .++... ......+|.|.+++.
T Consensus 1 a~p~p~i~~~~~~~~v~~G~~v~L~C~~~~----~v~W~~~~~--------------~~~~~~--~~~~~~~L~i~~~~~ 60 (289)
T 3ejj_X 1 ADPAPVIEPSGPELVVEPGETVTLRCVSNG----SVEWDGPIS--------------PYWTLD--PESPGSTLTTRNATF 60 (289)
T ss_dssp ---CCEEESCSSEEEECTTCCEEEEEECSS----CCEEECSCS--------------SSSEEC--CCSSCCEEEESSCCG
T ss_pred CCCCcEecCCCceEEECCCCCEEEEEEeCC----cEEEccCCC--------------ceEEEe--ccCCccEEEEeeecc
Confidence 468888888889999999999999999987 399996431 111111 223567999999999
Q ss_pred CCCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 83 RDNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 83 ~D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
+|+|.|.|.+. .....+..+.|.|...
T Consensus 61 ~d~G~Y~C~~~~~~~~~~~~~~l~V~~~ 88 (289)
T 3ejj_X 61 KNTGTYRCTELEDPMAGSTTIHLYVKDP 88 (289)
T ss_dssp GGCEEEEEECCC-----CEEEEEEECCS
T ss_pred ccCEEEEEEEeccCCcceeEEEEEEeCC
Confidence 99999999984 4455677788887653
No 409
>2iep_A Muscle-specific kinase receptor; beta-sandwich, signaling protein,transferase; 2.21A {Rattus norvegicus}
Probab=99.31 E-value=6.9e-12 Score=83.09 Aligned_cols=82 Identities=23% Similarity=0.246 Sum_probs=61.4
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
.....+.+|+++.|.|.+.+.+.+.+.|+|.. ..+ ..+.|+... .+.+|.|.+++.+|+|.|+|.+
T Consensus 107 ~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~--~~~-------~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a 172 (192)
T 2iep_A 107 PINVKIIEGLKAVLPCTTMGNPKPSVSWIKGD--SAL-------RENSRIAVL-----ESGSLRIHNVQKEDAGQYRCVA 172 (192)
T ss_dssp CCCEEEETTSCEEECCEEEEESCCEEEEEETT--EEC-------CCCSSEEEC-----TTSCEEESSCCGGGCEEEEEEE
T ss_pred CcceEEeCCCcEEEEEEEeccCCceEEEEeCC--EEc-------cCCCcEEEe-----cCCcEEEecCChhhCEEEEEEE
Confidence 34578899999999999998888899999843 222 235566654 2347999999999999999999
Q ss_pred c-CCCCe-eEEEEeceec
Q psy14080 93 Q-PYTTT-SHSQNAPGLG 108 (113)
Q Consensus 93 ~-~~~~~-s~~~~L~V~g 108 (113)
. ..+.. +..+.|.|..
T Consensus 173 ~n~~g~~~s~~~~l~V~~ 190 (192)
T 2iep_A 173 KNSLGTAYSKLVKLEVEV 190 (192)
T ss_dssp EETTEEEECCCEEEEEEC
T ss_pred EcCCCcEEEEEEEEEEEe
Confidence 5 44433 4567777753
No 410
>3grw_A Fibroblast growth factor receptor 3; FGFR3, protein-protein complex, receptor tyrosine kinas binding, immunoglobulin domain, kinase, membrane, nucleotid binding; HET: NAG; 2.10A {Homo sapiens}
Probab=99.31 E-value=1e-11 Score=85.11 Aligned_cols=86 Identities=12% Similarity=0.193 Sum_probs=62.5
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
...+++.+|+++.|.|.+.+.+.+.|.|+|.. ..+.... ...+.... ....+|.|.+++.+|+|.|+|.+
T Consensus 22 ~~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~--~~~~~~~----~~~~~~~~----~~~~~L~i~~v~~~d~G~Y~C~~ 91 (241)
T 3grw_A 22 KKLLAVPAANTVRFRCPAAGNPTPSISWLKNG--REFRGEH----RIGGIKLR----HQQWSLVMESVVPSDRGNYTCVV 91 (241)
T ss_dssp CCEEEEETTSEEEEECCEECSSCCEEEEEETT--EECCGGG----STTCCEEE----GGGTEEEECSCCGGGCEEEEEEE
T ss_pred CcceEEcCCCeEEEEEEecCCCCceeEEEECC--cccCCCC----cccceeee----ccceEEEEEeCCcccCEEEEEEE
Confidence 35688999999999999998888899999843 2222110 11122332 24669999999999999999999
Q ss_pred c-CCCCeeEEEEeceec
Q psy14080 93 Q-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 93 ~-~~~~~s~~~~L~V~g 108 (113)
. ..+..+..+.|.|..
T Consensus 92 ~~~~~~~~~~~~l~V~~ 108 (241)
T 3grw_A 92 ENKFGSIRQTYTLDVLE 108 (241)
T ss_dssp EETTEEEEEEEEEEEEC
T ss_pred eecCCceEEEEEEEEec
Confidence 5 445667778888765
No 411
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.31 E-value=9e-12 Score=83.81 Aligned_cols=83 Identities=11% Similarity=-0.107 Sum_probs=55.6
Q ss_pred EEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecCC
Q psy14080 16 STGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQPY 95 (113)
Q Consensus 16 ~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 95 (113)
..+.+|++++|.|.+.+. .+.+.|+|... .+... ..++.... ......+|.|.+++.+|+|.|+|.+...
T Consensus 110 ~~v~~G~~v~L~C~~~~~-~~~v~W~k~g~-~~~~~-------~~~~~~~~-~~~~~~~L~i~~v~~~D~G~Y~C~a~n~ 179 (198)
T 1ugn_A 110 PVVNSGGNVTLQCDSQVA-FDGFILCKEGE-DEHPQ-------CLNSQPHA-RGSSRAIFSVGPVSPSRRWWYRCYAYDS 179 (198)
T ss_dssp SEEETTCCEEEEEECSSC-CSEEEEEEC-------C-------EEEC-------CCEEEEEECCCCTTSCEEEEEEEECT
T ss_pred cccCCCCcEEEEEecCCC-CcEEEEEECCC-ccCCc-------cccccccC-CCcceeEEEecccCcccCeEEEEEEEeC
Confidence 578899999999999887 67999998532 22110 11111111 1223579999999999999999999532
Q ss_pred --CC----eeEEEEeceec
Q psy14080 96 --TT----TSHSQNAPGLG 108 (113)
Q Consensus 96 --~~----~s~~~~L~V~g 108 (113)
+. .|..+.|.|.|
T Consensus 180 ~~~~~~s~~S~~~~l~V~g 198 (198)
T 1ugn_A 180 NSPYEWSLPSDLLELLVLG 198 (198)
T ss_dssp TSTTEECCCCCCEEEEEEC
T ss_pred CCCccccCcCceEEEEecC
Confidence 22 27788888876
No 412
>2r15_A Myomesin-1; sarcomeric protein, IG-like domains, homodimer, immunoglobul domain, muscle protein, thick filament, contractIle protein; 2.24A {Homo sapiens}
Probab=99.31 E-value=1.8e-11 Score=82.25 Aligned_cols=89 Identities=15% Similarity=0.047 Sum_probs=61.0
Q ss_pred eeEeecceEEE-ecCCcEEEEEEEccC-CCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCC
Q psy14080 8 ILTAFGQISTG-FLAVFSYSDKTVRDI-VKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 8 i~~~~~~~~tv-~~G~~a~L~C~v~~~-~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~ 85 (113)
|....|..+++ -.|+.+.|.|.+.+. +.+.|.|||.. ..+ ..++|+.+.. .++..+|.|.+++.+|+
T Consensus 3 v~~~~g~~v~l~c~~~~~~l~C~~~~~~p~~~i~W~~~g--~~i-------~~~~~~~~~~--~~~~~~L~i~~v~~~D~ 71 (212)
T 2r15_A 3 SIALSATDLKIQSTAEGIQLYSFVTYYVEDLKVNWSHNG--SAI-------RYSDRVKTGV--TGEQIWLQINEPTPNDK 71 (212)
T ss_dssp ---CCBCCCEEEECSSEEEEEEEBSSCCSSCEEEEEETT--EEC-------CCCSSEEEEE--ETTEEEEEEESCCGGGC
T ss_pred ccceecCcEEEEEcCceEEEEEEEeccCCCceEEEEECC--EEc-------cCCCeEEEEE--eCCEEEEEECCCCcccC
Confidence 34445555443 357888999998875 47899999843 222 2357887653 23567899999999999
Q ss_pred EEEEEeecC-CCCeeEEEEecee
Q psy14080 86 GTYECQAQP-YTTTSHSQNAPGL 107 (113)
Q Consensus 86 G~Y~C~~~~-~~~~s~~~~L~V~ 107 (113)
|.|+|.+.. .+..+..+.|.|.
T Consensus 72 G~Y~C~~~n~~~~~~~~~~l~v~ 94 (212)
T 2r15_A 72 GKYVMELFDGKTGHQKTVDLSGQ 94 (212)
T ss_dssp EEEEEEEECSSCEEEEEEEECHH
T ss_pred EEEEEEEecCCcceEEEEEEEEe
Confidence 999999954 4455666676654
No 413
>3kld_A Contactin 4, axcam, BIG-2; cell adhesion, protein complex, receptor protein tyrosine phosphatase; HET: NAG; 2.00A {Mus musculus} PDB: 3jxa_A*
Probab=99.31 E-value=1.1e-11 Score=91.22 Aligned_cols=88 Identities=15% Similarity=0.108 Sum_probs=64.3
Q ss_pred eeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCE
Q psy14080 7 GILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNG 86 (113)
Q Consensus 7 ~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 86 (113)
.+.......+.+.+|+++.|.|.+.+.+.+.+.|+|.++. .+. .+.... ..+.+|.|.+++.+|+|
T Consensus 206 ~~~~~~~~~~~~~~G~~v~l~C~~~g~P~p~i~W~k~~~~-~~~---------~~~~~~----~~~~~L~I~~v~~~D~G 271 (384)
T 3kld_A 206 KIEVQFPETVPAEKGTTVKLECFALGNPVPTILWRRADGK-PIA---------RKARRH----KSNGILEIPNFQQEDAG 271 (384)
T ss_dssp EEEEECCSEEEEETTSCEEEEEEEEEESCCEEEEEETTCC-CCC---------TTCEEC----TTSCEEEECSCCGGGCE
T ss_pred ceeecCCCceEecCCCcEEEEEEEeecCCCcEEEEeCCCc-ccc---------ccceec----CCCcEEEECCCChhhCE
Confidence 3444456677899999999999999999999999985432 111 111111 13558999999999999
Q ss_pred EEEEee-cCCCCeeEEEEeceec
Q psy14080 87 TYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 87 ~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
.|+|.+ +..+.....+.|.|..
T Consensus 272 ~Y~C~a~N~~G~~~~~~~l~v~~ 294 (384)
T 3kld_A 272 SYECVAENSRGKNVAKGQLTFYA 294 (384)
T ss_dssp EEEEEEEETTEEEEEEEEEEEEE
T ss_pred EEEEEEEcCCCeEEEEEEEEEec
Confidence 999999 4556666677777754
No 414
>4fqp_A Poliovirus receptor; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; HET: NAG BMA FUC MAN; 3.60A {Homo sapiens} PDB: 1nn8_R 1dgi_R
Probab=99.30 E-value=1.4e-11 Score=87.98 Aligned_cols=88 Identities=11% Similarity=-0.052 Sum_probs=63.7
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCC-EEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKV-RVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~-~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
|+.+.........+.+|++++|.|.+.+.|.+ .|.|+|.+.. + ....... +.+|.|.+++.+
T Consensus 216 ~P~v~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~~~~~~--l---------~~~~~~~------~~~L~i~~v~~~ 278 (313)
T 4fqp_A 216 PPEVSISGYDNNWYLGQNEATLTCDARSNPEPTGYNWSTTMGP--L---------PPFAVAQ------GAQLLIRPVDKP 278 (313)
T ss_dssp EEEEEEECCCSCEETTCCCEEEEEEEEEESCCCEEEEEETTBS--C---------CTTEEEE------TTEEEECCCSSC
T ss_pred CCccccccccceeecCCCeEEEEEEecCCCCCcEEEEEECCEE--C---------CCceEEe------CCEEEECcCChh
Confidence 44444444444566779999999999988877 6999985421 1 1111111 338999999999
Q ss_pred CCEEEEEee-cCCCCeeEEEEeceecc
Q psy14080 84 DNGTYECQA-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 84 D~G~Y~C~~-~~~~~~s~~~~L~V~g~ 109 (113)
|+|.|.|.+ +..+..+..+.|.|...
T Consensus 279 d~G~Y~C~a~N~~G~~~~~~~l~V~~~ 305 (313)
T 4fqp_A 279 INTTLICNVTNALGARQAELTVQVKEG 305 (313)
T ss_dssp CEEEEEEEEECSSCEEEEEEEEEEECC
T ss_pred hCEEEEEEEEeCCCcEEEEEEEEEEeC
Confidence 999999999 56688888899998753
No 415
>3mj6_A Junctional adhesion molecule-like; immunoglobulin tandem domain, cell adhesion, cell junction, glycoprotein, immunoglobulin domain, membrane; HET: NAG FUC; 2.19A {Mus musculus} PDB: 3mj7_A* 3mj9_A*
Probab=99.30 E-value=5.1e-12 Score=88.00 Aligned_cols=97 Identities=9% Similarity=0.109 Sum_probs=65.4
Q ss_pred ecceEEEecCCcEEEEEEE---ccCCCCEEEEEecCC-----CeEEEecce----EEcCC----CCEEEEEeCCCCcEEE
Q psy14080 12 FGQISTGFLAVFSYSDKTV---RDIVKVRVSWVRRRD-----WHILTSGVL----TYTND----ARFQVIHTDGSDDWNL 75 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v---~~~~~~~V~W~k~~~-----~~~l~~~~~----~~~~~----~R~~~~~~~~~~~~~L 75 (113)
....+.+.+|++++|.|.+ .+.+.+.|.|+|.++ ..++..... ....+ .|+.+..+......+|
T Consensus 124 ~p~~~~v~~G~~v~L~C~~~~~~~~p~~~v~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~L 203 (268)
T 3mj6_A 124 EPRDLRVRVGDTTQMRCSIQSTEEKRVTKVNWMFSSGSHTEEETVLSYDSNMRSGKFQSLGRFRNRVDLTGDISRNDGSI 203 (268)
T ss_dssp CCSEEEEETTCCEEECCBCEESSSSCCCEEEEEEECTTCSSCEEEEEEETTSSSCEEECSSTTTTTEEECSCGGGTBCCE
T ss_pred CCCccccccCCcEEEEEEecCCCCCCccceEEEecCCCCCcceeEEEecCCCCccccccccccccceEeeccCCCCeEEE
Confidence 3456789999999999999 555778999999643 122221100 01112 2444432222356799
Q ss_pred EEccCCCCCCEEEEEeec-CCCCeeEEEEeceec
Q psy14080 76 QIKFLQKRDNGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 76 ~I~~v~~~D~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
.|.+++.+|+|.|+|.+. ..+..+..+.|.|..
T Consensus 204 ~i~~v~~~D~G~Y~C~a~n~~g~~~~~~~l~V~~ 237 (268)
T 3mj6_A 204 KLQTVKESDQGIYTCSIYVGKLESRKTIVLHVVQ 237 (268)
T ss_dssp EECSCCGGGCEEEEEEEEETTEEEEEEEEEEEEC
T ss_pred EECcCChhhCeEEEEEEEcCCceEEEEEEEEEEc
Confidence 999999999999999994 445667888888843
No 416
>1dr9_A B7-1 (CD80), T lymphocyte activation antigen; IG superfamily, immune system; HET: NAG; 3.00A {Homo sapiens} SCOP: b.1.1.1 b.1.1.3 PDB: 1i8l_A*
Probab=99.30 E-value=5e-12 Score=84.86 Aligned_cols=91 Identities=16% Similarity=0.144 Sum_probs=60.0
Q ss_pred eEEEecCCcEEEEEEEccC----CCCEEEEEecCCCeEE-EecceEEc---CCCCEEEEEeCCCCcEEEEEccCCCCCCE
Q psy14080 15 ISTGFLAVFSYSDKTVRDI----VKVRVSWVRRRDWHIL-TSGVLTYT---NDARFQVIHTDGSDDWNLQIKFLQKRDNG 86 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~----~~~~V~W~k~~~~~~l-~~~~~~~~---~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 86 (113)
.+++.+|++|+|+|.+... +.+.+.|+|.. ..+. ........ -..|..+. ..++++|.|.+++.+|+|
T Consensus 3 ~v~v~~G~~v~L~C~~~~~~~~~~~~~~~W~~~~-~~i~~~~~~~~~~~~~~~~r~~~~---~~~~~~L~I~~v~~~D~G 78 (201)
T 1dr9_A 3 HVTKEVKEVATLSCGHNVSVEELAQTRIYWQKEK-KMVLTMMSGDMNIWPEYKNRTIFD---ITNNLSIVILALRPSDEG 78 (201)
T ss_dssp EEEEETTSCEEECCSCCCCTTHHHHCEEEEEETT-EEEEEEETTEEEECHHHHTTEEEE---STTTTEEEECSCCGGGCE
T ss_pred eEEEEeCCCEEEecccCCCcccccccEEEEEeCC-cEEEEEeCCceeecCcccceeEEc---cCCCcEEEEecccchhCe
Confidence 4688999999999999642 44688998843 2222 11111100 12455542 124679999999999999
Q ss_pred EEEEeecCC-CCe-----eEEEEeceecc
Q psy14080 87 TYECQAQPY-TTT-----SHSQNAPGLGD 109 (113)
Q Consensus 87 ~Y~C~~~~~-~~~-----s~~~~L~V~g~ 109 (113)
.|.|.+... +.. +..+.|.|.+.
T Consensus 79 ~Y~C~~~~~~g~~~~~~~~~~~~l~V~~~ 107 (201)
T 1dr9_A 79 TYECVVLKYEKDAFKREHLAEVTLSVKAD 107 (201)
T ss_dssp EEEEEEEECCTTSCEEEEEEEEEEEEECC
T ss_pred EEEEEEEcCCCCccccccccEEEEEEcCC
Confidence 999999542 222 45778888764
No 417
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.30 E-value=6.1e-12 Score=84.40 Aligned_cols=83 Identities=18% Similarity=0.186 Sum_probs=61.1
Q ss_pred cceEEEecCCcEEEEEEE-ccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 13 GQISTGFLAVFSYSDKTV-RDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v-~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
.....+.+|+++.|.|.+ .+.+.+.+.|+|. +..+. ..+.|+... +.+|.|.+++.+|+|.|+|.
T Consensus 118 ~~~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~--~~~l~------~~~~~~~~~------~~~L~i~~~~~~d~G~Y~C~ 183 (212)
T 2v9r_A 118 PSDVMVAVGEPAVMECQPPRGHPEPTISWKKD--GSPLD------DKDERITIR------GGKLMITYTRKSDAGKYVCV 183 (212)
T ss_dssp CCCEEEETTSCEEEECBCCCEESCCEEEEEET--TEEEC------TTSTTEEEE------TTEEEESSCCGGGCEEEEEE
T ss_pred CCceEecCCCcEEEEEecCCCCCCCEEEEEEC--CccCC------CCcceEEcc------CCeEEEeeCCHhhCeeEEEE
Confidence 345688999999999998 7888889999984 33332 124566543 34899999999999999999
Q ss_pred ec-CCCCe-eEEEEeceecc
Q psy14080 92 AQ-PYTTT-SHSQNAPGLGD 109 (113)
Q Consensus 92 ~~-~~~~~-s~~~~L~V~g~ 109 (113)
+. ..+.. +..+.|.|.+.
T Consensus 184 a~N~~g~~~s~~~~l~V~~~ 203 (212)
T 2v9r_A 184 GTNMVGERESEVAELTVLER 203 (212)
T ss_dssp EEETTEEEECCCEEEEEEC-
T ss_pred EecccCceecceEEEEEEeC
Confidence 95 44443 33478888754
No 418
>2gi7_A GPVI protein; IG-like domains, blood clotting, cell adhesion; 2.40A {Homo sapiens}
Probab=99.30 E-value=8.7e-12 Score=83.34 Aligned_cols=81 Identities=16% Similarity=-0.000 Sum_probs=58.2
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+..++..... .+.+|++++|.|.+.+ +.+.+.|||.... ... ...+|.|.+++.+|
T Consensus 7 ~~P~i~~~p~~-~v~~G~~v~L~C~~~~-~~~~~~W~k~g~~----------------~~~-----~~~~L~i~~v~~~D 63 (184)
T 2gi7_A 7 PKPSLQALPSS-LVPLEKPVTLRCQGPP-GVDLYRLEKLSSS----------------RYQ-----DQAVLFIPAMKRSL 63 (184)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECST-TCSEEEEEETTTC----------------CEE-----SSSEEEESSCCGGG
T ss_pred CCCeEEeCCCc-cccCCCcEEEEEeCCC-CCCEEEEEECCcc----------------ccC-----cccEEEECcCChhh
Confidence 44444444443 8999999999999987 6679999985421 111 35689999999999
Q ss_pred CEEEEEeecCCC---CeeEEEEeceec
Q psy14080 85 NGTYECQAQPYT---TTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~~---~~s~~~~L~V~g 108 (113)
+|.|.|.+.... ..+..+.|.|.+
T Consensus 64 ~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 90 (184)
T 2gi7_A 64 AGRYRCSYQNGSLWSLPSDQLELVATG 90 (184)
T ss_dssp CEEEEEEEEETTEEBCCCCCEEEEEES
T ss_pred CceEEEEEEcCCCccCCCCCEEEEecC
Confidence 999999995432 334556777754
No 419
>3ejj_X Macrophage colony-stimulating factor 1 receptor; growth factor-receptor complex, receptor tyrosine kinase, CY 4-helix bundle, ATP-binding; HET: NAG; 2.40A {Mus musculus} PDB: 4exp_X*
Probab=99.30 E-value=6.3e-11 Score=82.99 Aligned_cols=88 Identities=15% Similarity=0.091 Sum_probs=60.9
Q ss_pred ceEEEecCCcEEEEEEEcc-CCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 14 QISTGFLAVFSYSDKTVRD-IVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~-~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
....+.+|+++.|.|.+.+ .+.+.+.|+|.. ..+............+. ...+|.|.+++.+|+|.|.|.+
T Consensus 194 ~~~~~~~g~~~~l~C~~~~~~p~~~i~W~~~~--~~~~~~~~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C~a 264 (289)
T 3ejj_X 194 SKLVRIRGEAAQIVCSATNAEVGFNVILKRGD--TKLEIPLNSDFQDNYYK-------KVRALSLNAVDFQDAGIYSCVA 264 (289)
T ss_dssp SSEECCSSSCEEEEEEEEESSSCCEEEEEETT--EECCCCEEEEECSSSEE-------EEEEEEESSCCSSSCEEEEEEE
T ss_pred CceEEEeCCcEEEEEEeCCCCCceEEEEEECC--EEeeccCCcccccceEE-------eeEEEEEEeecccCCEEEEEEE
Confidence 3456678999999999998 678899999853 22211110000111211 2569999999999999999999
Q ss_pred -cCCCCeeEEEEeceeccc
Q psy14080 93 -QPYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 93 -~~~~~~s~~~~L~V~g~~ 110 (113)
+..+..+..+.|.+...-
T Consensus 265 ~N~~G~~~~s~~L~~~~~~ 283 (289)
T 3ejj_X 265 SNDVGTRTATMNFQVVESH 283 (289)
T ss_dssp ECSSCEEEEEEEEECC---
T ss_pred EcCCCCccccEEEEEEecc
Confidence 556888889999887643
No 420
>1itb_B Type 1 interleukin-1 receptor; immunoglobulin fold, transmembrane, glycoprotein, signal, complex (immunoglobulin/receptor); 2.50A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 PDB: 1ira_Y* 4dep_B* 1g0y_R
Probab=99.29 E-value=1.3e-11 Score=87.84 Aligned_cols=101 Identities=10% Similarity=-0.042 Sum_probs=67.1
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCC----CCcEEEEEccC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDG----SDDWNLQIKFL 80 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~----~~~~~L~I~~v 80 (113)
|+.+.......+.+.+|+++.|.|.+.+.+.+.+.|+|. +..+..+... ....++.+....+ ....+|.|.++
T Consensus 208 ~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~i~W~~~--g~~i~~~~~~-~~~~~~~~~~~~~~~~~~~~~~L~i~~v 284 (315)
T 1itb_B 208 RPVIVSPANETMEVDLGSQIQLICNVTGQLSDIAYWKWN--GSVIDEDDPV-LGEDYYSVENPANKRRSTLITVLNISEI 284 (315)
T ss_dssp CCEECSCCSEEEECCSSSCEEEEEEEEECTTSEEEEEET--TEECCTTCSS-EEEEEEEECCSSCGGGEEEEEEEEESSC
T ss_pred CCEEecCCCCcEEEeCCCcEEEEEEEecCCCCeeEEEEC--CEECCccccc-ccccceeeeccCCCceeEEEEEEEEeec
Confidence 444544444446789999999999999998899999983 3332211100 0011122110000 12459999999
Q ss_pred CCCC-CEEEEEee-cCCCCeeEEEEeceec
Q psy14080 81 QKRD-NGTYECQA-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 81 ~~~D-~G~Y~C~~-~~~~~~s~~~~L~V~g 108 (113)
+.+| +|.|+|.+ +..+..+..+.|.|+.
T Consensus 285 ~~~d~~G~Y~C~a~N~~G~~~~~~~l~v~~ 314 (315)
T 1itb_B 285 ESRFYKHPFTCFAKNTHGIDAAYIQLIYPV 314 (315)
T ss_dssp CGGGGTSCEEEEEECTTCCEEEEEEEECCC
T ss_pred CHHHcCCceEEEEecCCCceeEEEEEEecC
Confidence 9999 99999999 5668888899998864
No 421
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.29 E-value=7.7e-12 Score=82.76 Aligned_cols=82 Identities=15% Similarity=0.103 Sum_probs=60.7
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCE-EEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVR-VSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~-V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
.|+..++.....+++.+|++++|.|.+.+.+.+. +.|+|.. ..+. ....+|.|.+++.
T Consensus 5 ~~~p~i~~~p~~~~v~~G~~v~L~C~~~~~p~~~~~~W~~~~--~~~~-------------------~~~~~L~i~~~~~ 63 (175)
T 1fnl_A 5 LPKAVVFLEPQWYSVLEKDSVTLKCQGAYSPEDNSTQWFHNE--SLIS-------------------SQASSYFIDAATV 63 (175)
T ss_dssp CCCCEEEEESCCSEEETTCCEEEEEECCCBTTBCCCEEEETT--EEEE-------------------SSCSEEEESSCCG
T ss_pred CCCCEEEEcCCceeeeCCCcEEEEeeCCCCCCCcceEEEECC--EEcc-------------------CCceEEEEeCCCc
Confidence 4666667777778999999999999998876555 7899842 2221 1355999999999
Q ss_pred CCCEEEEEeecCCCCeeEEEEecee
Q psy14080 83 RDNGTYECQAQPYTTTSHSQNAPGL 107 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~~~s~~~~L~V~ 107 (113)
+|+|.|.|.+.. ...+..++|.|.
T Consensus 64 ~d~G~Y~C~~~n-~~~s~~~~l~V~ 87 (175)
T 1fnl_A 64 NDSGEYRCQTNL-STLSDPVQLEVH 87 (175)
T ss_dssp GGCEEEEEECSS-SCCCCCEEEEEE
T ss_pred ccCEEEEEEeeC-CcccccEEEEEe
Confidence 999999999964 223445666665
No 422
>1epf_A NCAM, protein (neural cell adhesion molecule); immunoglobulin fold, glycoprotein; 1.85A {Rattus norvegicus} SCOP: b.1.1.4 b.1.1.4 PDB: 2ncm_A 3ncm_A
Probab=99.29 E-value=5.5e-12 Score=83.65 Aligned_cols=70 Identities=21% Similarity=0.254 Sum_probs=54.0
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
.....+.+|+++.|.|.+.+.+.+.+.|+|.. ..+.. ..+.|+... .+.+|.|.+++.+|+|.|+|.+
T Consensus 107 ~~~~~~~~g~~~~l~C~~~g~p~~~v~W~~~~--~~~~~-----~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~a 174 (191)
T 1epf_A 107 PTPQEFKEGEDAVIVCDVVSSLPPTIIWKHKG--RDVIL-----KKDVRFIVL-----SNNYLQIRGIKKTDEGTYRCEG 174 (191)
T ss_dssp CSSEECCTTSCEEECCEEECSSCCEEEEEETT--EEGGG-----GCCTTEEEC-----TTSCEEETTCCGGGCEEEEEEE
T ss_pred CCcEeecCCCeEEEEEEECCCCCCEEEEEECC--EEeec-----cCCceEEEe-----cCCeEEECCCChhhCEEEEEEE
Confidence 34567889999999999998888999999843 22211 235677764 2347999999999999999999
Q ss_pred cC
Q psy14080 93 QP 94 (113)
Q Consensus 93 ~~ 94 (113)
..
T Consensus 175 ~n 176 (191)
T 1epf_A 175 RI 176 (191)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 423
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.29 E-value=1.3e-11 Score=90.12 Aligned_cols=84 Identities=18% Similarity=0.198 Sum_probs=66.5
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
...+..+.+|++++|.|.+.+.+.+.+.|+|.. ..+ ....++.+. ...+|.|.+++.+|+|.|.|.
T Consensus 318 ~~~~~~~~~g~~v~l~C~~~g~p~p~v~W~~~g--~~~-------~~~~~~~~~-----~~~~L~i~~v~~~d~G~Y~C~ 383 (403)
T 3laf_A 318 HPSNLYAYESMDIEFECAVSGKPVPTVNWMKNG--DVV-------IPSDYFQIV-----GGSNLRILGVVKSDEGFYQCV 383 (403)
T ss_dssp CCCCEECCTTCCEEECCEEEEESCCEEEEEETT--EEC-------CCSSSEEEE-----TTTEEEESSCCGGGCEEEEEE
T ss_pred cCcceEEecCCeEEEEEEEeeccCCEEEEEECC--EEC-------CCCCcEEEe-----cCccEEEeccccccCEEEEEE
Confidence 345567889999999999999888999999843 222 235566654 245899999999999999999
Q ss_pred e-cCCCCeeEEEEeceecc
Q psy14080 92 A-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 92 ~-~~~~~~s~~~~L~V~g~ 109 (113)
+ +..+..+..+.|.|.+.
T Consensus 384 a~N~~G~~~~~~~l~V~~P 402 (403)
T 3laf_A 384 AENEAGNAQSSAQLIVPKP 402 (403)
T ss_dssp EEETTEEEEEEEEEECCCC
T ss_pred EEcCCceEEEEEEEEEeCC
Confidence 9 56678888899998763
No 424
>3jz7_A MCAR, CAR, coxsackievirus and adenovirus receptor homolog; cell adhesion molecule, immunoglobuline superfamily, alternative splicing, cell adhesion; 2.19A {Mus musculus} PDB: 3mj7_B* 2npl_X
Probab=99.29 E-value=7.4e-12 Score=83.79 Aligned_cols=79 Identities=9% Similarity=0.078 Sum_probs=59.4
Q ss_pred EEecCCcEEEEEEE-ccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-cC
Q psy14080 17 TGFLAVFSYSDKTV-RDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA-QP 94 (113)
Q Consensus 17 tv~~G~~a~L~C~v-~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-~~ 94 (113)
.+.+|+++.|.|.+ .+.+.+.+.|+|..+...+. ..+.. ...+.+|.|.+++.+|+|.|+|.+ +.
T Consensus 132 ~~~~g~~v~l~C~~~~g~p~~~v~W~~~~~~~~~~--------~~~~~-----~~~~~~L~i~~~~~~d~G~Y~C~a~N~ 198 (214)
T 3jz7_A 132 SEEIGNDFKLKCEPKEGSLPLQFEWQKLSDSQTMP--------TPWLA-----EMTSPVISVKNASSEYSGTYSCTVQNR 198 (214)
T ss_dssp CCBTTCCEEEEEECSBCCSSCEEEEEECSTTCCCC--------GGGGG-----GTTSSEEEECSCCGGGCEEEEEEEECS
T ss_pred ceecCCcEEEEecCCCCCCCCEEEEEECCCCCccC--------cccee-----ccCCCEEEEecCCHHHCEEEEEEEEcC
Confidence 46789999999999 78888899999964332221 11110 112349999999999999999999 45
Q ss_pred CCCeeEEEEeceec
Q psy14080 95 YTTTSHSQNAPGLG 108 (113)
Q Consensus 95 ~~~~s~~~~L~V~g 108 (113)
.+..+..+.|.|..
T Consensus 199 ~g~~~~~~~l~V~~ 212 (214)
T 3jz7_A 199 VGSDQCMLRLDVVP 212 (214)
T ss_dssp SCEEEEEEEECCBC
T ss_pred CCcEEEEEEEEEeC
Confidence 67788899999874
No 425
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.29 E-value=2.7e-11 Score=81.43 Aligned_cols=90 Identities=11% Similarity=-0.037 Sum_probs=59.6
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+..++.... ..+.+|++++|.|.+.+.+. .+.|||...... .+. ... .......+|.|.+++.+|
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~~~~--~~~----~~~------~~~~~~~~L~i~~v~~~D 69 (196)
T 2d3v_A 4 SKATLWAEPG-SVISRGNSVTIRCQGTLEAQ-EYRLVKEGSPEP--WDT----QNP------LEPKNKARFSIPSMTEHH 69 (196)
T ss_dssp CBCEEEEESC-SEEETTCCEEEEEECCTTCC-EEEEEETTCSSC--SEE----ECC------CSSTTEEEEEESSCCGGG
T ss_pred CCCEEEeCCC-CcccCCCeEEEEEeCCCCCc-EEEEEECCCCCC--ccc----ccc------cCCccccEEEeccCChhH
Confidence 3334444444 37899999999999987665 899998542110 000 000 012356799999999999
Q ss_pred CEEEEEeecCC-C--CeeEEEEeceec
Q psy14080 85 NGTYECQAQPY-T--TTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~-~--~~s~~~~L~V~g 108 (113)
+|.|+|.+... + ..+..+.|.|.+
T Consensus 70 ~G~Y~C~a~n~~g~~~~s~~~~l~V~~ 96 (196)
T 2d3v_A 70 AGRYRCYYYSPAGWSEPSDPLELVVTG 96 (196)
T ss_dssp CEEEEEEEEETTEECBCCCCEEEEEEC
T ss_pred CeEEEEEEeCCCCcCCcCccEEEEecC
Confidence 99999999532 2 234567777765
No 426
>1xau_A B- and T-lymphocyte attenuator; IG domain, beta sandwich, structural genomics, PSI, protein structure initiative; 1.80A {Mus musculus} SCOP: b.1.1.4
Probab=99.28 E-value=2.1e-11 Score=77.20 Aligned_cols=93 Identities=15% Similarity=0.141 Sum_probs=61.6
Q ss_pred ceEEEecCCcEEEEEEEccC-CCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 14 QISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
...++..|+++.|.|.+.+- +.|.|.|.|............ ...|-......+-..+.|+|.+|.++|+|.|.|.+
T Consensus 22 S~~tv~~G~~~~LeCpv~yc~~rPnVtWcK~~~~~c~~L~~~---~q~~~~w~e~~n~s~fiL~f~~V~~sDsG~YrCsA 98 (122)
T 1xau_A 22 SKHSAWTGELFKIECPVKYCVHRPNVTWCKHNGTIWVPLEVG---PQLYTSWEENRSVPVFVLHFKPIHLSDNGSYSCST 98 (122)
T ss_dssp EEEEECTTSCEEEEEEEECSSSCCCEEEEEECSSSEEECCCB---TTEEEEEECSSSSCEEEEEETTCCGGGCEEEEEEE
T ss_pred ccEEEecCCeEEEEeEecCCCCCCcEEEEecCCeeccccccc---eeeecceeccCCceeEEEEEeeEEEcCCccEEEEe
Confidence 34789999999999999764 688999999864333221100 00011111112335789999999999999999999
Q ss_pred cCC-C-CeeEEEEeceecc
Q psy14080 93 QPY-T-TTSHSQNAPGLGD 109 (113)
Q Consensus 93 ~~~-~-~~s~~~~L~V~g~ 109 (113)
+.. + ..+..+.|.|.|.
T Consensus 99 n~~~g~ieSHs~ti~V~~~ 117 (122)
T 1xau_A 99 NFNSQVINSHSVTIHVRER 117 (122)
T ss_dssp EETTEEEECCCEEEEEC--
T ss_pred eCCCCceeeeEEEEEEEee
Confidence 653 2 4466677888764
No 427
>2ocw_A Polymeric-immunoglobulin receptor; SC, secretory, antibody, immunity, immune system; NMR {Homo sapiens} PDB: 3chn_S 3cm9_S 3chn_J 3cm9_J
Probab=99.28 E-value=3.7e-11 Score=92.11 Aligned_cols=96 Identities=13% Similarity=0.156 Sum_probs=69.8
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEE----EEEec-CCC--eEEEec-ceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRV----SWVRR-RDW--HILTSG-VLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V----~W~k~-~~~--~~l~~~-~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
...+.+.+|+++.|.|.+.+.+.+.+ .|+|. ++. .+...+ ......++|+.+..+..++.++|.|.+++.+|
T Consensus 338 ~~~~~~~~G~~v~l~C~~~~~p~p~i~~w~~W~~~~~g~~~~l~~~~~~~~~~~~~r~~~~~~~~~g~~~L~I~~v~~~D 417 (585)
T 2ocw_A 338 PTVVKGVAGSSVAVLCPYNRKESKSIKYWCLWEGAQNGRCPLLVDSEGWVKAQYEGRLSLLEEPGNGTFTVILNQLTSRD 417 (585)
T ss_pred CcceEEEeCCcEEEEEecCCCCCccEEEEEEEEccCCCCCceeeeecceeecccCCCEEEeccCCCcEEEEEECCCChhh
Confidence 45678899999999999998887776 79873 222 232211 11123467888864334566789999999999
Q ss_pred CEEEEEeecCCCCeeEEEEeceec
Q psy14080 85 NGTYECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~~~~s~~~~L~V~g 108 (113)
+|.|.|.++..+..+..+.|.|..
T Consensus 418 ~G~Y~C~an~~g~~~~~~~l~V~~ 441 (585)
T 2ocw_A 418 AGFYWCLTNGDTLWRTTVEIKIIE 441 (585)
T ss_pred CEEEEEcccCCCccceeEEEEEec
Confidence 999999996667777788888864
No 428
>2ifg_A High affinity nerve growth factor receptor; TRK, TRKA, receptor-ligand complex transferase; HET: NAG NDG MAN BMA; 3.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 c.10.2.7
Probab=99.28 E-value=2.1e-11 Score=88.85 Aligned_cols=83 Identities=16% Similarity=0.116 Sum_probs=61.3
Q ss_pred EEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeC-----CCCcEEEEEccCCCCCCEEEEEe
Q psy14080 17 TGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTD-----GSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 17 tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~-----~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
.+.+|++++|.|.+.+.+.+.|.|+|. +..+. ...+....... .....+|.|.+++.+|+|.|+|.
T Consensus 257 ~~~~g~~v~l~C~~~g~P~p~i~W~~~--g~~l~-------~~~~~~~~~~~~~~~~~~~~~~L~I~~v~~~d~G~Y~C~ 327 (347)
T 2ifg_A 257 TAVEMHHWCIPFSVDGQPAPSLRWLFN--GSVLN-------ETSFIFTEFLEPAANETVRHGCLRLNQPTHVNNGNYTLL 327 (347)
T ss_dssp CCEESSSEEEEEEEEEESCCEEEEEET--TEECC-------CCSSEEEEECCCCTTCCCEEEEEEESSCCGGGCEEEEEE
T ss_pred cCccCceEEEEEEeeecCCCcEEEEeC--CEECC-------CCcceeeEEEeecCCCcccceEEEECCCCcccCceEEEE
Confidence 356799999999999999999999974 33332 12222221101 12366899999999999999999
Q ss_pred e-cCCCCeeEEEEeceec
Q psy14080 92 A-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 92 ~-~~~~~~s~~~~L~V~g 108 (113)
+ +..+..+..+.|.|.+
T Consensus 328 a~N~~G~~~~~~~l~V~~ 345 (347)
T 2ifg_A 328 AANPFGQASASIMAAFMD 345 (347)
T ss_dssp EEETTEEEEEEEEECSCC
T ss_pred EecCCCceeeEEEEEecC
Confidence 9 5667888999999875
No 429
>2vr9_A Roundabout 1, ROBO; immunoglobulin-like domain, AXON guidance, cell adhesion, immunoglobulin domain; 3.2A {Drosophila melanogaster} PDB: 2vra_A*
Probab=99.27 E-value=9.3e-12 Score=84.19 Aligned_cols=82 Identities=15% Similarity=0.150 Sum_probs=54.6
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+. .....+++.+|+++.|.|.+.+.+.+.|.|+|. +..+.... ....|+.. ..+...+.|.|.+++.+|
T Consensus 9 ~P~i~-~~p~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~--g~~~~~~~---~~~~~~~~--~~~~~~~~l~i~~v~~~d 80 (217)
T 2vr9_A 9 SPRII-EHPTDLVVKKNEPATLNCKVEGKPEPTIEWFKD--GEPVSTNE---KKSHRVQF--KDGALFFYRTMQGKKEQD 80 (217)
T ss_dssp CCEEE-ECCCCEEECTTSCEEECCEEECSSCCEEEEEET--TEECCCSS---SSSSEEEC--TTSCEEESSCCBSSSCBC
T ss_pred CCEEe-cCCCceEEeCCCcEEEEEEcCCCCCCeEEEEEC--CcCccCCC---ccceeEEe--cCCceEEEEEeccCCccc
Confidence 44444 445678999999999999999888889999984 22222110 01122221 112222345899999999
Q ss_pred CEEEEEeecC
Q psy14080 85 NGTYECQAQP 94 (113)
Q Consensus 85 ~G~Y~C~~~~ 94 (113)
+|.|+|.+..
T Consensus 81 ~G~Y~C~~~n 90 (217)
T 2vr9_A 81 GGEYWCVAKN 90 (217)
T ss_dssp CEEEEEEEEE
T ss_pred CceEEEEEec
Confidence 9999999954
No 430
>3r08_E T-cell surface glycoprotein CD3 epsilon chain; antibody, T-cell receptor, signalling, immune SY; 4.10A {Cricetulus migratorius}
Probab=99.27 E-value=5.4e-13 Score=80.50 Aligned_cols=71 Identities=11% Similarity=0.113 Sum_probs=49.8
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccC-CCCCCEEEEEe
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFL-QKRDNGTYECQ 91 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v-~~~D~G~Y~C~ 91 (113)
++...+..|++|+|.|.+.+.| .|.|+|. +..|. .. .+.+|.|.++ +.+|+|.|.|.
T Consensus 6 p~~~v~~~G~~v~L~C~~~g~P--~i~W~kd--g~~l~--------~~----------~~~~L~I~~v~~~~DsG~Y~C~ 63 (82)
T 3r08_E 6 IEYKVSISGTSVELTCPLDSDE--NLKWEKN--GQELP--------QK----------HDKHLVLQDFSEVEDSGYYVCY 63 (82)
T ss_dssp CCCEEEEETTEEEEECSSCCCS--SCEEEET--TEECT--------TC----------CSSCCBCCSCCTTTTCSCEEEE
T ss_pred CceeEEEcCCeEEEEEECCCCC--cEEEEEC--CEECc--------CC----------CCCEEEECccCccCcCEEEEEE
Confidence 3445677899999999999876 3999983 33221 11 2348999996 88999999999
Q ss_pred ecCCCCeeEEEEeceec
Q psy14080 92 AQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 92 ~~~~~~~s~~~~L~V~g 108 (113)
+.+ ...+ ++|-|++
T Consensus 64 A~t-~~~~--~~lylka 77 (82)
T 3r08_E 64 TPA-SNKN--TYLYLKA 77 (82)
T ss_dssp CSS-CTTC--CCCCCTT
T ss_pred Ecc-CCcc--EEEEEEE
Confidence 976 2223 3454544
No 431
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.27 E-value=4.2e-12 Score=90.97 Aligned_cols=93 Identities=16% Similarity=0.149 Sum_probs=65.1
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCEEEEEecC--CCeEEEecceEEcCCCCEEEEEe-----CCCCcEEEEEccCCCCC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRR--DWHILTSGVLTYTNDARFQVIHT-----DGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~--~~~~l~~~~~~~~~~~R~~~~~~-----~~~~~~~L~I~~v~~~D 84 (113)
...+.++.+|+++.|.|.+.+.+.+.+.|+|.. ++..+..+ ...++.+... .+....+|.|.+++.+|
T Consensus 228 ~~~~~~~~~G~~v~l~C~~~g~p~p~v~W~~~~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~L~i~~v~~~d 302 (334)
T 1ry7_B 228 LPANQTAVLGSDVEFHCKVYSDAQPHIQWLKHVEVNGSKVGPD-----GTPYVTVLKTAGANTTDKELEVLSLHNVTFED 302 (334)
T ss_dssp CSCCEEEESSCCEEECCCCBCSSCEEEEEEECCCGGGCSBCTT-----SSBCCCCCCCSSCSCSCTTCCCEEECSCCTTS
T ss_pred CCCceEEeCCCCEEEEEEEecCCCCeEEEEECCcCCCccccCC-----CCeeEEEeecCccccccccccEEEEccCCHHH
Confidence 346678999999999999998888899999952 11111111 0111222110 01223489999999999
Q ss_pred CEEEEEee-cCCCCeeEEEEeceecc
Q psy14080 85 NGTYECQA-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~-~~~~~~s~~~~L~V~g~ 109 (113)
+|.|+|.+ +..+..+..+.|.|...
T Consensus 303 ~G~Y~C~a~N~~G~~~~~~~l~V~~~ 328 (334)
T 1ry7_B 303 AGEYTCLAGNSIGFSHHSAWLVVLPA 328 (334)
T ss_dssp CSEEEEEEEESSCCEEEEEEEEEECS
T ss_pred CEEEEEEEeCCCCeEEEEEEEEEEEC
Confidence 99999999 56688888999999764
No 432
>4i0k_A CD276 antigen; immunoglobulin domain, glycoprotein, immunity, adaptive IMMU structural genomics, protein structure initiative; HET: NAG BMA MAN; 2.97A {Mus musculus}
Probab=99.26 E-value=4.4e-11 Score=81.09 Aligned_cols=89 Identities=13% Similarity=0.065 Sum_probs=57.3
Q ss_pred eEEEecCCcEEEEEEE-ccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-
Q psy14080 15 ISTGFLAVFSYSDKTV-RDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA- 92 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v-~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~- 92 (113)
...+.+|++++|.|.+ .+.+.+.|.|+|.++ ..+. .+.+.......+.....|.|.+++.+|+|.|+|.+
T Consensus 119 ~~~v~~G~~~~l~C~~~~g~P~~~v~W~~~~~-~~~~-------~~~~~~~~~~~~~~~~~l~i~~v~~~d~G~Y~C~a~ 190 (222)
T 4i0k_A 119 NKDLRPGNMVTITCSSYQGYPEAEVFWKDGQG-VPLT-------GNVTTSQMANERGLFDVHSVLRVVLGANGTYSCLVR 190 (222)
T ss_dssp -----CCSEEEEEEEEEEEBSCCEEEEECTTS-CBCC-------SEEEEEEEECTTSCEEEEEEEEEECCTTCEEEEEEE
T ss_pred CceecCCceEEEEEecccccCCCeEEEEcCCC-ccCC-------CCcceeEEcCCCCeEEEEEEEEEEeCCCCEEEEEEE
Confidence 3467889999999999 777888999987432 2211 01111111112222235899999999999999999
Q ss_pred cCCCCeeEEEEeceecccc
Q psy14080 93 QPYTTTSHSQNAPGLGDLL 111 (113)
Q Consensus 93 ~~~~~~s~~~~L~V~g~~~ 111 (113)
+..+..+..+.|.|.+.-.
T Consensus 191 n~~g~~~~~~~l~V~~~p~ 209 (222)
T 4i0k_A 191 NPVLQQDAHGSVTITGQPL 209 (222)
T ss_dssp ETTTTEEEEEEEECCC---
T ss_pred CCCCCCceEEEEEEeCCcc
Confidence 4667888889999987643
No 433
>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A
Probab=99.26 E-value=4.3e-11 Score=93.77 Aligned_cols=84 Identities=15% Similarity=0.111 Sum_probs=70.3
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
..+..+.+|+++.|.|.+.+.+.+.|.|||.. ..| ....||.+.. +++..+|.|.++..+|+|.|+|.+
T Consensus 489 ~~~~~v~~G~~~~~~~~v~g~P~P~v~W~k~~--~el-------~~s~~~~i~~--~~~~~~L~I~~~~~~D~G~Yt~~A 557 (573)
T 3uto_A 489 PYGTEVGEGQSANFYCRVIASSPPVVTWHKDD--REL-------KQSVKYMKRY--NGNDYGLTINRVKGDDKGEYTVRA 557 (573)
T ss_dssp CCCEEECTTSCEEEEEEEECSSCCEEEEEETT--EEC-------CSSSSEEEEE--ETTEEEEEECSCCGGGCEEEEEEE
T ss_pred CCCcEEeCCCcEEEEEEEEccCCCeEEEEECC--EEc-------ccCCcEEEEE--cCCEEEEEEcCCCcccCcEEEEEE
Confidence 35578899999999999999999999999842 222 3467888864 356789999999999999999999
Q ss_pred -cCCCCeeEEEEecee
Q psy14080 93 -QPYTTTSHSQNAPGL 107 (113)
Q Consensus 93 -~~~~~~s~~~~L~V~ 107 (113)
|..+..+..+.|+|.
T Consensus 558 ~N~~G~~~~~v~l~Vt 573 (573)
T 3uto_A 558 KNSYGTKEEIVFLNVT 573 (573)
T ss_dssp EETTEEEEEEEEEEEC
T ss_pred EeCCCcEEEEEEEEEC
Confidence 677899999999883
No 434
>2x1w_L Vascular endothelial growth factor receptor 2; hormone-signaling protein complex, angiogenesis, glycoprotein, HOST-virus interaction, membrane; HET: NAG BMA; 2.70A {Homo sapiens} PDB: 2x1x_R*
Probab=99.26 E-value=9.5e-12 Score=84.80 Aligned_cols=84 Identities=12% Similarity=-0.066 Sum_probs=58.0
Q ss_pred ecceEEEecC--CcEEEEEEEccCCCCEEEEEecC-CCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEE
Q psy14080 12 FGQISTGFLA--VFSYSDKTVRDIVKVRVSWVRRR-DWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTY 88 (113)
Q Consensus 12 ~~~~~tv~~G--~~a~L~C~v~~~~~~~V~W~k~~-~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (113)
....+++.+| ++|+|+|.+.+ +.+.|.|+|.. ++.++. .+.++... ....|.|.+++.+|+|.|
T Consensus 13 ~p~~v~v~eG~~~~v~L~C~~~~-p~~~v~w~~~~~~g~~~~-------~~~~~~~~-----~~~~l~I~~v~~~D~G~Y 79 (213)
T 2x1w_L 13 QHGVVYITENKNKTVVIPCLGSI-SNLNVSLCARYPEKRFVP-------DGNRISWD-----SKKGFTIPSYMISYAGMV 79 (213)
T ss_dssp -CEEEEECCSTTCEEEECCCBSS-TTCCEEEEEETTTEEECC-------CSSSCEEE-----TTTEEEEEGGGTTTCSEE
T ss_pred CceEEEEecCCCccEEEeeccCC-CCcEEEEEhhcCCCcccc-------CCCccccc-----CCccEEEccCChhcCceE
Confidence 3467899999 99999999986 56899999862 233332 23345443 234799999999999999
Q ss_pred EEeecCCC--CeeEEEEeceec
Q psy14080 89 ECQAQPYT--TTSHSQNAPGLG 108 (113)
Q Consensus 89 ~C~~~~~~--~~s~~~~L~V~g 108 (113)
+|.+.... ..+..+.|.|.+
T Consensus 80 ~C~a~n~~~~~~s~~~~l~v~~ 101 (213)
T 2x1w_L 80 FCEAKINDESYQSIMYIVVVVG 101 (213)
T ss_dssp EEEEC----CEECCCEEEEECB
T ss_pred EEEEEECCeeEEEEEEEEEEeC
Confidence 99995432 233346676654
No 435
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.26 E-value=3e-11 Score=88.16 Aligned_cols=85 Identities=12% Similarity=-0.027 Sum_probs=63.7
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
...+..+.+|+++.|.|.+.+.+.+.+.|+|. +..+..+ ....++... +.+|.|.+++.+|+|.|+|.
T Consensus 318 ~~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~--g~~~~~~----~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~ 385 (404)
T 3p3y_A 318 EPKNLILAPGEDGRLVCRANGNPKPTVQWMVN--GEPLQSA----PPNPNREVA------GDTIIFRDTQISSRAVYQCN 385 (404)
T ss_dssp CCCCEEECTTCCEEEECEEEEESCCEEEEEET--TEEGGGS----CCCTTEEEE------TTEEEESSCCSSCCCEEEEE
T ss_pred cCCcceeecCCcEEEEEEccccCCCceEEEEC--CEecCCC----CCCceEEec------CCEEEEeecCHHHCEEEEEE
Confidence 44567889999999999999988899999984 3332211 012344332 33899999999999999999
Q ss_pred e-cCCCCeeEEEEeceec
Q psy14080 92 A-QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 92 ~-~~~~~~s~~~~L~V~g 108 (113)
+ +..+..+..+.|.|++
T Consensus 386 a~N~~G~~~~~~~l~V~d 403 (404)
T 3p3y_A 386 TSNEHGYLLANAFVSVLD 403 (404)
T ss_dssp EEETTEEEEEEEEEEEC-
T ss_pred EEeCCCcEEEEEEEEEEe
Confidence 9 5667888889998875
No 436
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.26 E-value=8.8e-12 Score=90.76 Aligned_cols=91 Identities=16% Similarity=0.158 Sum_probs=62.6
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceE-----EcCCCCEEEEEeC-CCCcEEEEEccCCCCCCEEE
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLT-----YTNDARFQVIHTD-GSDDWNLQIKFLQKRDNGTY 88 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~-----~~~~~R~~~~~~~-~~~~~~L~I~~v~~~D~G~Y 88 (113)
.+++.+|++++|+|.+.+.+.+.|.|||.+...++...... ....+|+.+..+. ..+.++|.|.+++.+|+|.|
T Consensus 3 ~v~~~~G~~v~L~C~~~~~p~~~v~W~k~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~~L~I~~v~~~D~G~Y 82 (363)
T 1wio_A 3 VVLGKKGDTVELTCTASQKKSIQFHWKNSNQIKILGNQGSFLTKGPSKLNDRADSRRSLWDQGNFPLIIKNLKIEDSDTY 82 (363)
T ss_dssp EEEEETTSCEEECCCCTTCSSCCEEEEETTCCEEEEEETTEEEECSSTTGGGEECCHHHHHTTCCCEEECSCCGGGCEEE
T ss_pred eEEEeCCCeEEEEEEecCCCceEEEEEeCCccceeccCccEEecCCcccccceeeeeccccCCeEEEEECCCCHHHCEEE
Confidence 47889999999999999888889999996532222111000 0124577654100 23567899999999999999
Q ss_pred EEeecCCCCeeEEEEeceec
Q psy14080 89 ECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 89 ~C~~~~~~~~s~~~~L~V~g 108 (113)
+|.+... +..+.|.|.+
T Consensus 83 ~C~~~n~---~~~~~l~V~~ 99 (363)
T 1wio_A 83 ICEVEDQ---KEEVQLLVFG 99 (363)
T ss_dssp EEEETTE---EEEEEEEEEE
T ss_pred EEEEEEC---CCcEEEEEEe
Confidence 9999653 2356777764
No 437
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.26 E-value=4.2e-11 Score=81.69 Aligned_cols=80 Identities=14% Similarity=0.138 Sum_probs=60.0
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTY 88 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (113)
++..+.++++.+|+++.|.|.+.+.+.+.+.|||.+ ..+ ...+..+|.|.+++.+|+|.|
T Consensus 21 i~~~p~~~~v~~G~~v~L~C~~~~~p~~~v~W~~~~--~~~------------------~~~~~~~L~i~~v~~~d~G~Y 80 (218)
T 3k0w_A 21 ITVNPESKAVLAGQFVKLCCRATGHPFVQYQWFKMN--KEI------------------PNGNTSELIFNAVHVKDAGFY 80 (218)
T ss_dssp EEECCCCEEEETTSBEEEECEETTTTSSEEEEEETT--EEC------------------TTCCSSEEEETTCCGGGCEEE
T ss_pred EEECCCCeEEeCCCcEEEEeeecCCCCCEEEEEECC--EEC------------------CCCCCCEEEEccCChhhCeEe
Confidence 344566789999999999999998888899999843 111 112356899999999999999
Q ss_pred EEeecCC-C-CeeEEEEeceec
Q psy14080 89 ECQAQPY-T-TTSHSQNAPGLG 108 (113)
Q Consensus 89 ~C~~~~~-~-~~s~~~~L~V~g 108 (113)
+|.+... + ..+..+.|.|..
T Consensus 81 ~C~~~n~~~~~~s~~~~l~V~~ 102 (218)
T 3k0w_A 81 VCRVNNNFTFEFSQWSQLDVCD 102 (218)
T ss_dssp EEEEECTTCCEECCCEEEEEEC
T ss_pred EEEEEcCCCCceeeEEEEEEEc
Confidence 9999643 3 225556776654
No 438
>3k0w_A Mucosa-associated lymphoid tissue lymphoma translocation protein 1, isoform 2; hydrolase, immunoglobulin domain, nucleus, protease; 2.80A {Homo sapiens}
Probab=99.26 E-value=3.7e-11 Score=81.98 Aligned_cols=80 Identities=10% Similarity=-0.009 Sum_probs=60.5
Q ss_pred EeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 10 TAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 10 ~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
........+.+|+++.|.|.+.+.+.+.+.|+|.. ..+. .....+|.|.+++.+|+|.|+
T Consensus 122 ~~~~~~~~v~~G~~v~L~C~~~g~p~~~v~W~~~~--~~~~------------------~~~~~~L~i~~v~~~d~G~Y~ 181 (218)
T 3k0w_A 122 CVEPTSQKLMPGSTLVLQCVAVGSPIPHYQWFKNE--LPLT------------------HETKKLYMVPYVDLEHQGTYW 181 (218)
T ss_dssp EECCCCEEECTTCCEEEECEEEBSSCCEEEEEETT--EECT------------------TCCSSEEEESSCCGGGCEEEE
T ss_pred EECCCceeecCCCcEEEEEEecccCCCeEEEEECC--EECC------------------CCCCCEEEEeecChhcCEEEE
Confidence 34455678999999999999998888999999842 2211 112458999999999999999
Q ss_pred EeecC-CCC-eeEEEEeceecc
Q psy14080 90 CQAQP-YTT-TSHSQNAPGLGD 109 (113)
Q Consensus 90 C~~~~-~~~-~s~~~~L~V~g~ 109 (113)
|.+.. .+. .+..+.|.|.+.
T Consensus 182 C~a~n~~g~~~s~~~~l~V~~~ 203 (218)
T 3k0w_A 182 CHVYNDRDSQDSKKVEIIIDEL 203 (218)
T ss_dssp EEEECSSCEEECCCEEEEECC-
T ss_pred EEEEcCCCCceeeeEEEEEeCC
Confidence 99954 443 567788888763
No 439
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.25 E-value=5.6e-11 Score=79.60 Aligned_cols=91 Identities=10% Similarity=-0.053 Sum_probs=61.2
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
.|+..++..+.. .+.+|++++|.|.+.+. ...+.|||.. ..+... ..+.. ....+.+|.|.+++.+
T Consensus 2 l~~P~i~~~p~~-~v~~G~~v~L~C~~~~~-~~~~~w~k~g--~~~~~~------~~~~~----~~~~~~~L~I~~v~~~ 67 (188)
T 1oll_A 2 LPKPFIWAEPHF-MVPKEKQVTICCQGNYG-AVEYQLHFEG--SLFAVD------RPKPP----ERINKVKFYIPDMNSR 67 (188)
T ss_dssp CCCCEEEEESCS-EEETTCCEEEEEECCTT-CCEEEEEETT--EEEEEE------CCSSC----TTCCEEEEEESSCCGG
T ss_pred CCCCEEEeecCC-cCCCCCCEEEEEecCCC-CCEEEEEECC--Cccccc------ccccC----CCcceeEEEeCcCCcc
Confidence 455566655555 89999999999998753 4688999843 222110 11110 1235679999999999
Q ss_pred CCEEEEEeecCC---CCeeEEEEeceec
Q psy14080 84 DNGTYECQAQPY---TTTSHSQNAPGLG 108 (113)
Q Consensus 84 D~G~Y~C~~~~~---~~~s~~~~L~V~g 108 (113)
|+|.|.|.+... ...+..+.|.|.+
T Consensus 68 D~G~Y~C~~~~~~~~~~~s~~~~l~V~~ 95 (188)
T 1oll_A 68 MAGQYSCIYRVGELWSEPSNLLDLVVTE 95 (188)
T ss_dssp GCEEEEEEEEETTEECCCCCCEEEEEES
T ss_pred cCeEEEEEecCCCCCCCCCCceEEEecc
Confidence 999999999542 1335567777765
No 440
>4dep_C Interleukin-1 receptor accessory protein; B-trefoil, immunoglobulin, immune system, extracellular; HET: NAG; 3.10A {Homo sapiens} PDB: 3o4o_B*
Probab=99.25 E-value=1.2e-11 Score=89.25 Aligned_cols=88 Identities=10% Similarity=-0.014 Sum_probs=61.9
Q ss_pred cceEEEecCCcEEEEEEEccCC-----------CCEEEEEecCCCe--EEEecceEEcCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIV-----------KVRVSWVRRRDWH--ILTSGVLTYTNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~-----------~~~V~W~k~~~~~--~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
.+++++.+|++++|.|.+.+.+ .+.|.|||..... ..... ....+.|+... ..+|.|.+
T Consensus 14 ~~~v~v~~G~~v~L~C~~~~~p~~~~ys~~~~~~~~i~W~k~~~~~~~~~~~~--~~~~~~~~~~~------~~~L~i~~ 85 (349)
T 4dep_C 14 MRQIQVFEDEPARIKCPLFEHFLKFNYSTAHSAGLTLIWYWTRQDRDLEEPIN--FRLPENRISKE------KDVLWFRP 85 (349)
T ss_dssp CCCCEEETTSCEEEECTCCCCCSSSCHHHHHHTTCEEEEEEEESSCCCEEECC--CCCGGGCEEEE------TTEEEESS
T ss_pred eeeEEEecCCeEEEEccccccccccccccccCCCceEEEEECCCCCccccccc--ccccCceEeec------CCEEEEcc
Confidence 4568899999999999998654 4899999965211 11100 00123455443 34899999
Q ss_pred CCCCCCEEEEEeecC-CCCeeEEEEeceec
Q psy14080 80 LQKRDNGTYECQAQP-YTTTSHSQNAPGLG 108 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~-~~~~s~~~~L~V~g 108 (113)
++.+|+|.|.|.+.. ....+..+.|.|..
T Consensus 86 ~~~~D~G~Y~C~a~n~~~~~~~~~~l~V~~ 115 (349)
T 4dep_C 86 TLLNDTGNYTCMLRNTTYCSKVAFPLEVVQ 115 (349)
T ss_dssp CCGGGCEEEEEEEECSSCEEEEEEEEEEEC
T ss_pred CChhhCEEEEEEEecCCceEEEEEEEEEec
Confidence 999999999999954 45566678888875
No 441
>3o4o_C Interleukin-1 receptor type 2; cytokine-receptor complex, beta-trefoil, IG-like fold, immun; HET: NAG; 3.30A {Homo sapiens}
Probab=99.25 E-value=6.2e-12 Score=90.41 Aligned_cols=93 Identities=11% Similarity=0.064 Sum_probs=67.8
Q ss_pred ceeeEeecceEEEecCCcEEEEEEEc-------cCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEc
Q psy14080 6 GGILTAFGQISTGFLAVFSYSDKTVR-------DIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIK 78 (113)
Q Consensus 6 ~~i~~~~~~~~tv~~G~~a~L~C~v~-------~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~ 78 (113)
....+...+++.+.+|+++.|.|.+. +.+.+.|.|+|......+.. ..+.|+... +.+|.|.
T Consensus 18 ~p~~~~~~~~~~v~~G~~v~L~C~~~~~~~~~~~~p~~~v~W~k~~~~~~~~~-----~~~~~~~~~------~~~L~i~ 86 (339)
T 3o4o_C 18 CRFRGRHYKREFRLEGEPVALRCPQVPYWLWASVSPRINLTWHKNDSARTVPG-----EEETRMWAQ------DGALWLL 86 (339)
T ss_dssp CEEEEECSCCEEEETTBCCEEECTTSCSSCCSTTSSCCBCCCEESSCCSCCSC-----CSSSCEEEE------TTEEEES
T ss_pred hHhhCcCceEEEEECCccEEEEeccccccccccCCCCceEEEEECCCCcccCc-----cccccEEee------CCeEEEC
Confidence 33445566788999999999999998 77788999998542211210 114466543 4489999
Q ss_pred cCCCCCCEEEEEeec-CCCCeeEEEEeceecc
Q psy14080 79 FLQKRDNGTYECQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 79 ~v~~~D~G~Y~C~~~-~~~~~s~~~~L~V~g~ 109 (113)
+++.+|+|.|.|.+. ..+..+..+.|.|...
T Consensus 87 ~v~~~D~G~Y~C~~~n~~g~~~~~~~l~V~~~ 118 (339)
T 3o4o_C 87 PALQEDSGTYVCTTRNASYCDKMSIELRVFEN 118 (339)
T ss_dssp SBCTTCCEEEECCEEETTEEEEEEEEEEEECS
T ss_pred CCCcccCEEEEEEEECCcceEEEEEEEEEEcC
Confidence 999999999999995 4456677788888754
No 442
>2nzi_A Titin; IG-domain, FNIII-domain, transferase; 2.90A {Homo sapiens}
Probab=99.25 E-value=7.2e-11 Score=83.39 Aligned_cols=85 Identities=12% Similarity=0.161 Sum_probs=66.5
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEcc-CCCCCCEEEEEee
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKF-LQKRDNGTYECQA 92 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~~ 92 (113)
..+.+.+|+++.|.|.+.+.+.+.|.|+|.. ..+ ..+.|+.+.. .....+|.|.+ ++.+|+|.|.|.+
T Consensus 112 ~~~~~~~g~~~~l~C~~~g~p~p~i~W~~~~--~~~-------~~~~~~~~~~--~~~~~~l~i~~~~~~~d~G~Y~C~a 180 (305)
T 2nzi_A 112 GAVHALRGEVVSIKIPFSGKPDPVITWQKGQ--DLI-------DNNGHYQVIV--TRSFTSLVFPNGVERKDAGFYVVCA 180 (305)
T ss_dssp CCEEEETTCCEEEEEEEEEESCCEEEEEESS--SBC-------CSSSSCEEEE--CSSEEEEEETTCCCSTTCEEEEEEE
T ss_pred ccEEecCCCEEEEEEEECCCCCCEEEEEECC--EEC-------CCCCcEEEEE--cCCceEEEEecCCccCccEEEEEEE
Confidence 3567889999999999999988999999843 222 2456777653 33567999999 9999999999999
Q ss_pred -cCCCCeeEEEEeceecc
Q psy14080 93 -QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 93 -~~~~~~s~~~~L~V~g~ 109 (113)
+..+..+..+.|.|.+.
T Consensus 181 ~N~~G~~~~~~~l~v~~~ 198 (305)
T 2nzi_A 181 KNRFGIDQKTVELDVADV 198 (305)
T ss_dssp EETTEEEEEEEEEEEEBC
T ss_pred EeCCCceeeEEEEEEecC
Confidence 45567777888888753
No 443
>3u83_A Poliovirus receptor-related protein 1; nectin-1, hinge region plasiticity, cell adhesion; HET: PG6; 2.50A {Homo sapiens} PDB: 3alp_A* 3u82_B 4fmf_A* 3sku_E* 2l7j_A
Probab=99.24 E-value=2e-11 Score=87.23 Aligned_cols=89 Identities=12% Similarity=-0.001 Sum_probs=64.5
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCE-EEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEc-cCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVR-VSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIK-FLQK 82 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~-V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~-~v~~ 82 (113)
|+.+.........+.+|+++.|.|.+.+.+.+. +.|+|.+.. + ....... +.+|.|. +++.
T Consensus 231 ~P~~~~~~~~~~~~~~g~~~~l~C~~~g~p~p~~i~W~~~~~~-~----------~~~~~~~------~~~L~i~~~v~~ 293 (331)
T 3u83_A 231 EPEVTIEGFDGNWYLQRMDVKLTCKADANPPATEYHWTTLNGS-L----------PKGVEAQ------NRTLFFKGPINY 293 (331)
T ss_dssp EEEEEEECCCSCCBTTCCCEEEEEEEEEESCCCEEEEEETTBS-C----------CTTEEEE------TTEEEECSCCCG
T ss_pred CCeEEEecCCCceEeCCCeEEEEEeCcCCCCCCEEEEEECCCc-c----------cccceec------CcEEEEeCCCcc
Confidence 344443334445678899999999999888887 999985421 1 1122222 3489999 9999
Q ss_pred CCCEEEEEee-cCCCCeeEEEEeceeccc
Q psy14080 83 RDNGTYECQA-QPYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 83 ~D~G~Y~C~~-~~~~~~s~~~~L~V~g~~ 110 (113)
+|+|.|.|.+ +..+..+..+.|.|++..
T Consensus 294 ~d~G~Y~C~a~N~~G~~~~~~~l~V~~~~ 322 (331)
T 3u83_A 294 SLAGTYICEATNPIGTRSGQVEVNITEAA 322 (331)
T ss_dssp GGCEEEEEEEEETTEEEEEEEEECCBC--
T ss_pred ccCeEEEEEEEeccccceEEEEEEEeccc
Confidence 9999999999 566778899999998753
No 444
>3r4d_A CEA-related cell adhesion molecule 1, isoform 1/2; immunoglobulin, beta-sandwich, mceacam1A - immunoglobulin FO spike NTD - galectin-like beta-sandwich fold; HET: NAG; 3.10A {Mus musculus} PDB: 1l6z_A*
Probab=99.24 E-value=3.6e-11 Score=80.61 Aligned_cols=79 Identities=18% Similarity=0.182 Sum_probs=59.4
Q ss_pred EecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecC-CC
Q psy14080 18 GFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQP-YT 96 (113)
Q Consensus 18 v~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~-~~ 96 (113)
+.+|+++.|.|.+.+.+ +.+.|+|. +..+ ..+.|+.+.. .+.+|.|.+++.+|+|.|+|.+.. .+
T Consensus 122 ~~~g~~v~l~C~~~~~p-p~i~W~~~--g~~l-------~~~~~~~~~~----~~~~L~i~~v~~~d~G~Y~C~a~N~~g 187 (208)
T 3r4d_A 122 VKELDSVTLTCLSNDIG-ANIQWLFN--SQSL-------QLTERMTLSQ----NNSILRIDPIKREDAGEYQCEISNPVS 187 (208)
T ss_dssp CCTTCCEEEEEECSCTT-CEEEEEET--TEEC-------CCCSSEEEET----TTTEEEESSCCGGGCEEEEEEEECTTC
T ss_pred EeeCCCEEEEEECCCCC-CceEEEEC--CEeC-------CCCCCeEEcC----CCCEEEEeccCHHhCeEEEEEEecCCC
Confidence 78899999999999865 79999983 3332 2456777652 346899999999999999999953 34
Q ss_pred -CeeEEEEeceeccc
Q psy14080 97 -TTSHSQNAPGLGDL 110 (113)
Q Consensus 97 -~~s~~~~L~V~g~~ 110 (113)
..+..++|.|...-
T Consensus 188 ~~~s~~~~l~v~~~~ 202 (208)
T 3r4d_A 188 VRRSNSIKLDIIFDP 202 (208)
T ss_dssp CEECCCEEECCC---
T ss_pred cccCCceeeeEEeCC
Confidence 45788888887643
No 445
>1oll_A NK receptor; immune system/receptor, NK cell triggering receptor, immune system, IG domain, cytotoxicity, C2-type IG-like domains; 1.93A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.24 E-value=3.5e-11 Score=80.60 Aligned_cols=78 Identities=9% Similarity=-0.035 Sum_probs=56.3
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecC
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 94 (113)
...+.+|++++|.|...+. .+.+.|+|....... +.. ......+|.|.+++.+|+|.|+|.+..
T Consensus 107 ~~~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~~~~-----------~~~----~~~~~~~L~I~~v~~~d~G~Y~C~a~n 170 (188)
T 1oll_A 107 GPEVISGEKVTFYCRLDTA-TSMFLLLKEGRSSHV-----------QRG----YGKVQAEFPLGPVTTAHRGTYRCFGSY 170 (188)
T ss_dssp CSEEETTCEEEEEEECSSS-CSEEEEEEESSSCEE-----------EEE----ECSSEEEEEEEECCGGGCEEEEEECEE
T ss_pred CCccccCCEEEEEEEcCCC-CCEEEEEECCccccc-----------ccc----CCCceeEEEECCCCcCCCcEEEEEEEc
Confidence 3468899999999998754 468999985422111 001 112467999999999999999999953
Q ss_pred C----CCeeEEEEeceec
Q psy14080 95 Y----TTTSHSQNAPGLG 108 (113)
Q Consensus 95 ~----~~~s~~~~L~V~g 108 (113)
. ...|..+.|.|.|
T Consensus 171 ~~~~~s~~S~~~~l~V~g 188 (188)
T 1oll_A 171 NNHAWSFPSEPVKLLVTG 188 (188)
T ss_dssp ETTEECCCCCCEEEEEEC
T ss_pred CCCcCCCCCCcEEEEecC
Confidence 2 3457788888876
No 446
>1nkr_A P58-CL42 KIR; inhibitory receptor, natural killer cells, immunological receptors, immunoglobulin fold; 1.70A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1m4k_A 1efx_D 2dli_A 2dl2_A 3h8n_A
Probab=99.23 E-value=1.1e-10 Score=78.73 Aligned_cols=92 Identities=15% Similarity=0.007 Sum_probs=59.9
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+..+...+. ..+.+|++++|.|.+.. +.+.+.|||.... +.... ...++. .......|.|.+++.+|
T Consensus 7 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~-~~~~~~w~k~g~~-~~~~~-----~~~~~~----~~~~~~~l~I~~v~~~D 74 (201)
T 1nkr_A 7 RKPSLLAHPG-PLVKSEETVILQCWSDV-MFEHFLLHREGMF-NDTLR-----LIGEHH----DGVSKANFSISRMTQDL 74 (201)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEEESS-CCSEEEEEEESSS-CEEEE-----EECEEE----TTEEEEEEEESSCCGGG
T ss_pred CCCeEEEEcC-CccCCCCcEEEEEeccC-CCCEEEEEECCCc-CCcce-----eeeecC----CCCceEEEEeccCCccc
Confidence 3444444443 67899999999999974 5678999996432 11100 011111 12246799999999999
Q ss_pred CEEEEEeecCC------CCeeEEEEeceec
Q psy14080 85 NGTYECQAQPY------TTTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~------~~~s~~~~L~V~g 108 (113)
+|.|+|.+... ...+..+.|.|.+
T Consensus 75 ~G~Y~C~a~~~~~~~~~~~~s~~~~l~V~~ 104 (201)
T 1nkr_A 75 AGTYRCYGSVTHSPYQVSAPSDPLDIVIIG 104 (201)
T ss_dssp CEEEEEEEEBTTBTTCCCCCCCCEEEEEEC
T ss_pred CeEEEEeEecCCCCccccCCCCCEEEEeec
Confidence 99999999421 1335566777765
No 447
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.22 E-value=7e-11 Score=88.93 Aligned_cols=82 Identities=12% Similarity=0.030 Sum_probs=58.7
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeec
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQ 93 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 93 (113)
..+.|.+|+++.|.|.+.+.+.+.+.|++.+ .. +. ...++.. ......+|.|.+++.+|+|.|+|.+.
T Consensus 56 ~~v~V~~G~~v~L~C~v~g~P~p~i~W~~~~-~~-l~-------~~~~~~~---~~~~~~sL~I~~v~~~D~G~Y~C~a~ 123 (423)
T 3qs7_E 56 AAVEVDVSASITLQVLVDAPGNISCLWVFKH-SS-LN-------CQPHFDL---QNRGVVSMVILKMTETQAGEYLLFIQ 123 (423)
T ss_dssp CEEEECSSCCEEEEEECSCCSSCEEEEEETT-EE-EC-------CCCBC--------CEEEEEESSCCSSSCSEEEEEEE
T ss_pred ccEEEecCCcEEEEEEEEcCCCCeEEEEECC-Cc-cC-------ccceecc---ccceEEEEEEeecCcccCEEEEEEEE
Confidence 3788999999999999999888999999853 11 11 1112211 11234589999999999999999995
Q ss_pred -CCCCeeEEEEecee
Q psy14080 94 -PYTTTSHSQNAPGL 107 (113)
Q Consensus 94 -~~~~~s~~~~L~V~ 107 (113)
..+..+..+.|.|.
T Consensus 124 N~~g~~~~~~~l~V~ 138 (423)
T 3qs7_E 124 SEATNYTILFTVSIR 138 (423)
T ss_dssp C--CEEEEEEEEEEC
T ss_pred cCCCcEEEEEEEEEe
Confidence 44666777888776
No 448
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.21 E-value=1.6e-11 Score=81.12 Aligned_cols=81 Identities=15% Similarity=0.143 Sum_probs=56.7
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCC-EEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKV-RVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~-~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
|+..++.....+.+.+|++++|.|.+.+.+.+ .+.|||.. ..+ ..+..+|.|.+++.+
T Consensus 3 ~~P~i~~~p~~~~v~~G~~v~L~C~~~~~~~~~~i~W~~~~--~~~-------------------~~~~~~L~i~~v~~~ 61 (176)
T 1f2q_A 3 QKPKVSLNPPWNRIFKGENVTLTCNGNNFFEVSSTKWFHNG--SLS-------------------EETNSSLNIVNAKFE 61 (176)
T ss_dssp -CCCCEEESSCSEEETTCCEEEECCTTCC----CCEEEETT--EEC-------------------SCCSSEEEECSCCGG
T ss_pred CCCEEEcCCCCcceecCCcEEEEEeCCCCCCcceEEEEECC--eEC-------------------CCCceEEEEecccee
Confidence 44555566666889999999999999887654 68999843 111 013569999999999
Q ss_pred CCEEEEEeecCCCCeeEEEEecee
Q psy14080 84 DNGTYECQAQPYTTTSHSQNAPGL 107 (113)
Q Consensus 84 D~G~Y~C~~~~~~~~s~~~~L~V~ 107 (113)
|+|.|.|.+.. ...+..+.|.|.
T Consensus 62 d~G~Y~C~~~~-~~~s~~~~l~V~ 84 (176)
T 1f2q_A 62 DSGEYKCQHQQ-VNESEPVYLEVF 84 (176)
T ss_dssp GCEEEEEECTT-SSCCCCEEEEEE
T ss_pred cCEEEEEEcCC-ccccccEEEEEe
Confidence 99999999954 223444566664
No 449
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.21 E-value=1.3e-10 Score=84.58 Aligned_cols=73 Identities=16% Similarity=0.156 Sum_probs=58.8
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
....++.+|+++.|.|.+.+.+.+.|.|+|. +..+. ..+.+|.|.+++.+|+|.|+|.+
T Consensus 314 ~~~~~v~~g~~~~l~C~~~g~p~p~i~W~~~--g~~i~-------------------~~~~~L~i~~v~~~d~G~Y~C~a 372 (388)
T 2v5m_A 314 PPTQTVDFGRPAVFTCQYTGNPIKTVSWMKD--GKAIG-------------------HSESVLRIESVKKEDKGMYQCFV 372 (388)
T ss_dssp SSEEEECTTSCEEEEEEEEEECCCEEEEEET--TEECS-------------------CCSSEEEESSCCGGGCEEEEEEE
T ss_pred CCcEEecCCCCEEEEEEeccccCCeEEEEEC--CEECc-------------------cCCCEEEEecCChhhCEEEEEEE
Confidence 4567889999999999999988899999983 22221 12348999999999999999999
Q ss_pred -cCCCCeeEEEEece
Q psy14080 93 -QPYTTTSHSQNAPG 106 (113)
Q Consensus 93 -~~~~~~s~~~~L~V 106 (113)
+..+..+..+.|.|
T Consensus 373 ~N~~G~~~~~~~l~V 387 (388)
T 2v5m_A 373 RNDRESAEASAELKL 387 (388)
T ss_dssp ECSSCEEEEEEEEEE
T ss_pred EcCCCcEEEEEEEEe
Confidence 45677888888876
No 450
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.20 E-value=2.5e-11 Score=83.78 Aligned_cols=90 Identities=12% Similarity=-0.000 Sum_probs=58.7
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcE--EEEEccCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDW--NLQIKFLQK 82 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~--~L~I~~v~~ 82 (113)
|+..+...+. ..+.+|++++|.|.+.+ +.+.+.|||........ ..++. ...+.. +|.|.+++.
T Consensus 8 ~~P~i~~~p~-~~v~~G~~vtL~C~~~~-~~~~~~W~k~g~~~~~~--------~~~~~----~~~~~~~~~L~I~~v~~ 73 (218)
T 1uct_A 8 PMPFISAKSS-PVIPLDGSVKIQCQAIR-EAYLTQLMIIKNSTYRE--------IGRRL----KFWNETDPEFVIDHMDA 73 (218)
T ss_dssp CCCCEEESSC-SEEETTCCEEEEECCCT-TCSEEEEEEEETTEEEE--------CSEEC----C----CCCEEEECSCCG
T ss_pred CCCEEEecCC-CccCCCCCEEEEEEcCC-CCCEEEEEECCCccccc--------ccccC----CCCcceeeEEEEccccc
Confidence 4444444444 47899999999999986 56789999964322110 11111 111244 899999999
Q ss_pred CCCEEEEEeecCCC---CeeEEEEeceec
Q psy14080 83 RDNGTYECQAQPYT---TTSHSQNAPGLG 108 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~---~~s~~~~L~V~g 108 (113)
+|+|.|.|.+.... ..+..+.|.|.+
T Consensus 74 ~D~G~Y~C~a~n~~~~~~~s~~~~l~V~~ 102 (218)
T 1uct_A 74 NKAGRYQCQYRIGHYRFRYSDTLELVVTG 102 (218)
T ss_dssp GGCEEEEEEEEETTTEEEECCCEEEEEEC
T ss_pred ccCEEEEEEEEcCCCceeecCCEEEEEcC
Confidence 99999999996432 234557777765
No 451
>1wio_A CD4, T-cell surface glycoprotein CD4; immunoglobulin fold, transmembrane, MHC lipoprotein, polymorphism; 3.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.1 b.1.1.3 b.1.1.3 PDB: 1wip_A 1wiq_A 3t0e_E
Probab=99.20 E-value=6.2e-11 Score=86.22 Aligned_cols=92 Identities=9% Similarity=-0.050 Sum_probs=63.9
Q ss_pred ceEEEecCCcEEEEEEEcc-----CCCCEEEEEecCCCeEEEecceEE-cCCCCEEEEEe--------CCCCcEEEEEcc
Q psy14080 14 QISTGFLAVFSYSDKTVRD-----IVKVRVSWVRRRDWHILTSGVLTY-TNDARFQVIHT--------DGSDDWNLQIKF 79 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~-----~~~~~V~W~k~~~~~~l~~~~~~~-~~~~R~~~~~~--------~~~~~~~L~I~~ 79 (113)
..+.+.+|+++.|.|.+.+ .+.+.|.|+|.... +......+ ..+.++.+... ...+..+|.|.+
T Consensus 184 ~~~~~~~G~~v~l~C~~~~~~~~~~P~p~i~W~~~g~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~i~~ 261 (363)
T 1wio_A 184 SIVYKKEGEQVEFSFPLAFTVEKLTGSGELWWQAERAS--SSKSWITFDLKNKEVSVKRVTQDPKLQMGKKLPLHLTLPQ 261 (363)
T ss_dssp EEEEEETBCCEEEECCCCCCCCSSCEEEEEEEEESSCC--CCCCEEEEEECSSCEEEEEEECSSCCBCCSSSSCEEEESS
T ss_pred CceEEecCCEEEEEEEEecccccCCCceeEEEecCCCC--ccceEEEEEecCCeeeccccccchhhhcccCCceEEEEcc
Confidence 5567889999999999877 55678999985421 10000001 12456655321 123466999999
Q ss_pred CCCCCCEEEEEeec-C--CCCeeEEEEecee
Q psy14080 80 LQKRDNGTYECQAQ-P--YTTTSHSQNAPGL 107 (113)
Q Consensus 80 v~~~D~G~Y~C~~~-~--~~~~s~~~~L~V~ 107 (113)
++.+|+|.|.|.+. . .+..+..+.|.|.
T Consensus 262 v~~~d~G~Y~C~a~n~~~~g~~~~~~~l~V~ 292 (363)
T 1wio_A 262 ALPQYAGSGNLTLALEAKTGKLHQEVNLVVM 292 (363)
T ss_dssp BCGGGCEEEEEEECBTTTTCCEEEEEEEEEE
T ss_pred CCcCcCcEEEEEEEEhhhcCeEEEEEeEEEE
Confidence 99999999999994 5 5778888888886
No 452
>4frw_A Poliovirus receptor-related protein 4; immunoglobulin-like domain, IG domain, viral entry receptor, adhesion; 3.50A {Homo sapiens}
Probab=99.20 E-value=3.7e-10 Score=75.18 Aligned_cols=93 Identities=6% Similarity=-0.062 Sum_probs=61.4
Q ss_pred eeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 8 ILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 8 i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
..........+..|+++.|.|.+.+.+.+.|.|+|.... +.. .. ....+..+.. ..+|.|.+++.+|+|.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~c~~~g~p~p~i~W~~~~~~-~~~-~~-~~~~~~~~~~-------~s~L~i~~~~~~d~g~ 189 (218)
T 4frw_A 120 PSLNPGPALEEGQGLTLAASCTAEGSPAPSVTWDTEVKG-TTS-SR-SFKHSRSAAV-------TSEFHLVPSRSMNGQP 189 (218)
T ss_dssp CEEEECSCEETTCCSEEEEEEEEEEBSCCEEEEEESSCC-EEE-EE-EEECSSSEEE-------EEEEEECCCGGGTTCE
T ss_pred ceeeeeeeeeeeeccccceeeeccCCcCceEEEEECCcc-ccc-Cc-eEecCCcEEE-------EEEEEEeeCCHHhCeE
Confidence 333444556677899999999999999999999986432 211 11 1111222221 3489999999999999
Q ss_pred EEEeecC-CCC--eeEEEEeceeccc
Q psy14080 88 YECQAQP-YTT--TSHSQNAPGLGDL 110 (113)
Q Consensus 88 Y~C~~~~-~~~--~s~~~~L~V~g~~ 110 (113)
|+|.+.. .+. .+.++.|.|-...
T Consensus 190 YtC~a~N~~g~~~~~~t~~v~V~~~~ 215 (218)
T 4frw_A 190 LTCVVSHPGLLQDQRITHILHVSHHH 215 (218)
T ss_dssp EEEEEECTTCSSCEEEEEECCEECCC
T ss_pred EEEEEEeCCCCeEEEEEEEEEECcCc
Confidence 9999953 343 3455566665443
No 453
>2v5m_A Dscam; neurobiology SPL immunoglobulin domain, cell adhesion, membrane, development protein; HET: NAG; 1.95A {Drosophila melanogaster} PDB: 2v5s_A* 2v5r_A*
Probab=99.20 E-value=3.8e-11 Score=87.44 Aligned_cols=87 Identities=13% Similarity=0.024 Sum_probs=63.9
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeec
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQ 93 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 93 (113)
....+.+|+++.|.|.+.+.+.+.|.|+|........ .....+.|+... ..+|.|.+++.+|+|.|.|.+.
T Consensus 220 ~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~~~~~~~~---~~~~~~~~~~~~------~~~L~i~~v~~~d~G~Y~C~a~ 290 (388)
T 2v5m_A 220 KPLELMVAHTISLLCPAQGFPAPSFRWYKFIEGTTRK---QAVVLNDRVKQV------SGTLIIKDAVVEDSGKYLCVVN 290 (388)
T ss_dssp CCEEEETTSCEEECCCCEEESCCEEEEEEECTTSSCE---EECCCSSSEEEE------TTEEEESSCCGGGCEEEEEEEE
T ss_pred CceEEeeCCcEEEEEECCCCCCCEEEEEecCCCCccc---ccccccCceecc------cCEEEECcCCHHHCeEEEEEEe
Confidence 4457889999999999998888899999964221100 011234566543 3489999999999999999994
Q ss_pred -CCCCeeEEEEeceecc
Q psy14080 94 -PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 94 -~~~~~s~~~~L~V~g~ 109 (113)
..+..+..+.|.|...
T Consensus 291 n~~g~~~~~~~l~V~~~ 307 (388)
T 2v5m_A 291 NSVGGESVETVLTVTAP 307 (388)
T ss_dssp CSSCEEEEEEEEEEEEE
T ss_pred cCCCceeEEEEEEEeCC
Confidence 5566777888888653
No 454
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.20 E-value=5.7e-11 Score=77.57 Aligned_cols=83 Identities=13% Similarity=0.083 Sum_probs=60.6
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCC-CCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIV-KVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQK 82 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~ 82 (113)
.|..++...+..+.+.+|+++.|.|.+.+.+ ...+.|||.. ..+. . +...|.|.+++.
T Consensus 2 ~p~p~i~~~p~~~~v~~G~~v~l~C~~~~~p~~~~~~W~~~g--~~~~-------~------------~~~~~~~~~~~~ 60 (170)
T 3ry4_A 2 PPKAVLKLEPPWINVLQEDSVTLTCQGARSPESDSIQWFHNG--NLIP-------T------------HTQPSYRFKANN 60 (170)
T ss_dssp CCBCEEEEESCCSEEETTCEEEEEEESCCCSSSSCEEEEETT--EECT-------T------------CCSSEEEEECCG
T ss_pred CCCCEEEeCCCCeEEECCCcEEEEEEecCCCCcceEEEEECC--eEcc-------c------------CccceEEEeccc
Confidence 5777777777778899999999999998875 5689999832 2211 0 122466789999
Q ss_pred CCCEEEEEeecCCCCeeEEEEeceec
Q psy14080 83 RDNGTYECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 83 ~D~G~Y~C~~~~~~~~s~~~~L~V~g 108 (113)
+|+|.|.|.+.. ...+..+.|.|..
T Consensus 61 ~d~G~Y~C~~~~-~~~s~~~~l~v~~ 85 (170)
T 3ry4_A 61 NDSGEYTCQTGQ-TSLSDPVHLTVLF 85 (170)
T ss_dssp GGCEEEEEEETT-SBCCCCEEEEEEC
T ss_pred ccCeEEEEEEeC-CCceEeEEEEEEC
Confidence 999999999964 3334456666654
No 455
>3p3y_A Neurofascin; IG domains, cell adhesion; HET: NAG; 2.60A {Homo sapiens} PDB: 3p40_A*
Probab=99.19 E-value=2e-11 Score=89.08 Aligned_cols=95 Identities=15% Similarity=0.113 Sum_probs=67.3
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEc----c
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIK----F 79 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~----~ 79 (113)
.|+.+.......+.+.+|++++|.|.+.+.+.+.|.|+|. +..+.. ..+.|+.... .+.+|.|. +
T Consensus 15 ~~P~i~~~~~~~~~v~~G~~v~l~C~~~g~p~~~v~W~k~--g~~l~~-----~~~~~~~~~~----~~~~l~i~~~~~~ 83 (404)
T 3p3y_A 15 QPPTITKQSAKDHIVDPRDNILIECEAKGNPAPSFHWTRN--SRFFNI-----AKDPRVSMRR----RSGTLVIDFRSGG 83 (404)
T ss_dssp CCCCEEEECCTTCEECSSSCCCCCEEECCSSCCEEEEEET--TEECCG-----GGCSSCBCCS----SSCCCBCCCTTTC
T ss_pred CCCcccccCCccEEEcCCCCEEEEEEecCCCCCeEEEEEC--CEEeee-----ecCCcceEec----CCceEEEEeccCC
Confidence 4666666667778999999999999999888899999984 333221 1245555432 23455554 8
Q ss_pred CCCCCCEEEEEeecC-CCCe-eEEEEeceecc
Q psy14080 80 LQKRDNGTYECQAQP-YTTT-SHSQNAPGLGD 109 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~-~~~~-s~~~~L~V~g~ 109 (113)
++.+|+|.|.|.+.. .+.. +..+.|.|...
T Consensus 84 ~~~~D~G~Y~C~a~n~~g~~~s~~~~l~V~~~ 115 (404)
T 3p3y_A 84 RPEEYEGEYQCFARNKFGTALSNRIRLQVSKS 115 (404)
T ss_dssp CTTSSCEEEEEEEECSSCEEEEEEEEEEECCC
T ss_pred CCccCCEEEEEEEEcCCCeEeeeeEEEEEecc
Confidence 999999999999954 3433 56778887653
No 456
>3p2t_A Leukocyte immunoglobulin-like receptor subfamily 4; LILR, IG, inhibitory receptor, disulfide, immune system; 1.70A {Homo sapiens}
Probab=99.19 E-value=3.8e-11 Score=80.60 Aligned_cols=81 Identities=11% Similarity=-0.041 Sum_probs=54.4
Q ss_pred EEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecC-C
Q psy14080 17 TGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQP-Y 95 (113)
Q Consensus 17 tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~-~ 95 (113)
.+.+|++++|.|.+.+. ...+.|+|.... +... ..+.... ......+|.|.+++.+|+|.|+|.+.. .
T Consensus 110 ~v~~G~~v~L~C~~~~~-~~~~~w~k~g~~--~~~~------~~~~~~~--~~~~~~~L~i~~v~~~d~G~Y~C~a~n~~ 178 (196)
T 3p2t_A 110 LVTSGKSVTLLCQSRSP-MDTFLLCKERAA--HPLL------CLRSEHG--AQQHQAEFPMSPVTSVHGGTYRCFSSHGF 178 (196)
T ss_dssp EECTTCCEEEEEEEEEE-EEEEEEEETTCC--CGGG------SEEEEEE--EEEEEEEEEECSCCGGGCEEEEEEEECGG
T ss_pred eecCCCeEEEEEecCCC-CCEEEEEeCCCc--ccce------eeccccc--ccCcceEEEeCCCcccCCCeEEEEEEcCC
Confidence 67899999999999874 458999985421 1100 0011111 011356899999999999999999953 2
Q ss_pred -----CCeeEEEEeceec
Q psy14080 96 -----TTTSHSQNAPGLG 108 (113)
Q Consensus 96 -----~~~s~~~~L~V~g 108 (113)
...+..+.|.|.|
T Consensus 179 ~~~~~s~~S~~~~l~V~G 196 (196)
T 3p2t_A 179 SHYLLSHPSDPLELIVSG 196 (196)
T ss_dssp GTTEECCCCCCEEEEEC-
T ss_pred CCcccCCCCCCEEEEeCC
Confidence 2456778888876
No 457
>1uct_A Immunoglobulin alpha FC receptor; beta stands, immune system; 2.10A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1ovz_A* 1ow0_C*
Probab=99.19 E-value=3.5e-11 Score=83.05 Aligned_cols=81 Identities=12% Similarity=0.009 Sum_probs=57.0
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecC
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 94 (113)
...+.+|++++|.|...+.+.+.+.|+|.... + . ..+ . . .....+|.|.+++.+|+|.|+|.+..
T Consensus 114 ~~~v~~G~~v~L~C~~~~~~~~~~~W~k~g~~-~-~--------~~~-~-~---~~~~~~L~I~~v~~~D~G~Y~C~a~n 178 (218)
T 1uct_A 114 GLVLMPGENISLTCSSAHIPFDRFSLAKEGEL-S-L--------PQH-Q-S---GEHPANFSLGPVDLNVSGIYRCYGWY 178 (218)
T ss_dssp CSEECTTCCCEEEEECSSSCCSEEEEEETTCS-S-C--------CSE-E-E---CSSSEEEECCSCCGGGCEEEEEEEEC
T ss_pred CCccCCCCCEEEEEeCCCCCCCEEEEEECCCc-c-c--------ccc-c-C---CCccCEEEEccCCcccCEEEEEEEEc
Confidence 34788999999999777667788999985321 1 0 111 1 1 12467999999999999999999953
Q ss_pred C------CCeeEEEEeceeccc
Q psy14080 95 Y------TTTSHSQNAPGLGDL 110 (113)
Q Consensus 95 ~------~~~s~~~~L~V~g~~ 110 (113)
. ...|..+.|.|.|..
T Consensus 179 ~~~~~~~s~~S~~~~l~V~g~~ 200 (218)
T 1uct_A 179 NRSPYLWSFPSNALELVVTDSI 200 (218)
T ss_dssp TTSTTEECCCCCCEEEEEC---
T ss_pred CCCCCcCCCCCCcEEEEEecCC
Confidence 2 245678899998854
No 458
>3laf_A Deleted in colorectal cancer; netrin-1 receptor, immunoglobulin superfamily, horseshoe, AP; HET: NAG BMA; 2.40A {Rattus norvegicus}
Probab=99.18 E-value=1.4e-10 Score=84.73 Aligned_cols=84 Identities=17% Similarity=0.225 Sum_probs=64.4
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
....+.+.+|+++.|.|.+.+.+.+.+.|+|.. ..+. ....++... ++.+|.|.+++.+|+|.|+|.
T Consensus 227 ~~~~~~~~~g~~~~l~C~~~~~p~~~~~W~~~~--~~~~------~~~~~~~~~-----~~~~L~i~~~~~~d~G~Y~C~ 293 (403)
T 3laf_A 227 RPSNVIAIEGKDAVLECCVSGYPPPSFTWLRGE--EVIQ------LRSKKYSLL-----GGSNLLISNVTDDDSGTYTCV 293 (403)
T ss_dssp CCCCEEEETTSCEEECCEEEEESCCEEEEEETT--EECC------CSSSSEEEE-----TTTEEEECSCCGGGCEEEEEE
T ss_pred CCCceEecCCCcEEEEEEcCCCCCCeEEEEECC--eecc------CCCceEEEC-----CccEEEEeCCCHHHCEEEEEE
Confidence 445678889999999999999888899999843 2221 124566554 345899999999999999999
Q ss_pred ec-CCCCeeEEEEeceec
Q psy14080 92 AQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 92 ~~-~~~~~s~~~~L~V~g 108 (113)
+. ..+..+..+.|.|..
T Consensus 294 a~n~~g~~~~~~~l~V~~ 311 (403)
T 3laf_A 294 VTYKNENISASAELTVLV 311 (403)
T ss_dssp EEETTEEEEEEEEEEEEE
T ss_pred EEcCCCceEEEEEEEEEC
Confidence 94 556677778888764
No 459
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.18 E-value=1.2e-10 Score=88.51 Aligned_cols=88 Identities=10% Similarity=-0.031 Sum_probs=64.3
Q ss_pred ceEEEecCCcEEEEEEEccCCCCE-EEEEecCCCeEEEecceEEcCCCCEEEEEeC--CCCcEEEEEccCCCCCCEEEEE
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVR-VSWVRRRDWHILTSGVLTYTNDARFQVIHTD--GSDDWNLQIKFLQKRDNGTYEC 90 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~-V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~--~~~~~~L~I~~v~~~D~G~Y~C 90 (113)
..+.+.+|+++.|.|.+.+.+.+. |.|+|... .+.. ...||....+. .....+|.|.+++.+|+|.|+|
T Consensus 321 ~~~~v~~G~~v~l~C~~~g~P~p~~v~W~k~g~--~~~~------~~~~~~~~~~~~~~~~~~~L~i~~v~~~d~G~Y~C 392 (524)
T 2ec8_A 321 TTVFVNDGENVDLIVEYEAFPKPEHQQWIYMNR--TFTD------KWEDYPKSENESNIRYVSELHLTRLKGTEGGTYTF 392 (524)
T ss_dssp SEEEECTTCCEEEEEEEEEESCCCEEEEESSSC--BCSS------SBCCEESCCSSSCCEEEEEEEECSCCGGGCEEEEE
T ss_pred ceEEEcCCCcEEEEEEEeecCCCcEEEEEECCe--eccC------CccceeEEccCCCceeEEEEEEeecCcccCeEEEE
Confidence 468899999999999999988888 99998532 2211 12244432110 0135699999999999999999
Q ss_pred eec-CCCCeeEEEEeceecc
Q psy14080 91 QAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 91 ~~~-~~~~~s~~~~L~V~g~ 109 (113)
.+. ..+..+..+.|.|...
T Consensus 393 ~a~N~~g~~~~~~~l~V~~~ 412 (524)
T 2ec8_A 393 LVSNSDVNAAIAFNVYVNTK 412 (524)
T ss_dssp EEECSSCEEEEEEEEEECEE
T ss_pred EEEecCceEEEEEEEEEecC
Confidence 994 5577788888888653
No 460
>2c5d_C AXL oncogene, tyrosine-protein kinase receptor UFO; signaling protein/receptor, growth regulation/complex, vitamin K-dependent protein; HET: NAG; 3.3A {Homo sapiens}
Probab=99.18 E-value=2e-10 Score=76.49 Aligned_cols=77 Identities=12% Similarity=0.083 Sum_probs=57.2
Q ss_pred ecceEEEecCCcEEEEEEEccCCCC-EEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEE
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKV-RVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~-~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (113)
......+.+|+++.|.|.+.+.+.+ .|.|+|... .+. ...+. ....+|.|.+++ |+|.|.|
T Consensus 112 ~~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~~--~~~-------~~~~~-------~~~~~L~i~~~~--d~G~Y~C 173 (195)
T 2c5d_C 112 EPEDRTVAANTPFNLSCQAQGPPEPVDLLWLQDAV--PLA-------TAPGH-------GPQRSLHVPGLN--KTSSFSC 173 (195)
T ss_dssp CCCCEEECTTCCEEEEEEEECSSCCCEEEEEESSC--BSS-------SSTTS-------SCCEEEEECCCS--SCEEEEE
T ss_pred CCCcEEEcCCCEEEEEeECCCCCCCCEEEEEECCE--ecc-------CCCCc-------CCCCeEEEcccc--cCceEEE
Confidence 4445788999999999999998888 999998542 111 11121 246799999998 8999999
Q ss_pred eec-CCCCe-eEEEEece
Q psy14080 91 QAQ-PYTTT-SHSQNAPG 106 (113)
Q Consensus 91 ~~~-~~~~~-s~~~~L~V 106 (113)
.+. ..+.. +..+.|.|
T Consensus 174 ~a~N~~g~~~s~~~~l~V 191 (195)
T 2c5d_C 174 EAHNAKGVTTSRTATITV 191 (195)
T ss_dssp EEEETTEEEECCCEEEEE
T ss_pred EEEcCCCceEEEEEEEEE
Confidence 994 44555 36788887
No 461
>1nbq_A JAM, junctional adhesion molecule 1, PAM-1; reovirus receptor, tight junction formation, immunoglobulin superfamily, immune system; 2.90A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4 PDB: 3eoy_G
Probab=99.18 E-value=2.9e-12 Score=85.65 Aligned_cols=87 Identities=14% Similarity=0.214 Sum_probs=58.6
Q ss_pred eEEEecCCcEEEEEEE-ccCCCCEEEEEecCCCeEEEecce--EEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 15 ISTGFLAVFSYSDKTV-RDIVKVRVSWVRRRDWHILTSGVL--TYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v-~~~~~~~V~W~k~~~~~~l~~~~~--~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
...+.+|+++.|.|.+ .+.+.+.+.|+|... .+..+.. ....+.+|.+. ....+|.|.+++.+|+|.|+|.
T Consensus 116 ~~~~~~g~~~~l~C~~~~~~p~~~v~W~~~~~--~~~~~~~~~~~~~~~~~~~~----~~~~~L~i~~~~~~d~G~Y~C~ 189 (209)
T 1nbq_A 116 PSSATIGNRAVLTCSEQDGSPPSEYTWFKDGI--VMPTNPKSTRAFSNSSYVLN----PTTGELVFDPLSASDTGEYSCE 189 (209)
T ss_dssp BSEEETTSCEEECCCCCSCBSCCEEEEEETTC--CCCSCSSSSSSCTTCCCCCC----TTTCCEEESSCCGGGCCCEEEE
T ss_pred ccceecCCEEEEEEeCCCCCCCceeEEEECCe--eCCCccccceeeeccceEEc----CCcceEEEEeccccCCeEEEEE
Confidence 3468899999999997 778888999998542 2211110 00112344432 2456999999999999999999
Q ss_pred ec-CCCCe--eEEEEecee
Q psy14080 92 AQ-PYTTT--SHSQNAPGL 107 (113)
Q Consensus 92 ~~-~~~~~--s~~~~L~V~ 107 (113)
+. ..+.. +..+.|.|.
T Consensus 190 a~n~~g~~~~s~~v~l~V~ 208 (209)
T 1nbq_A 190 ARNGYGTPMTSNAVRMEAV 208 (209)
T ss_dssp EECSSSCCEECCCBCCEEE
T ss_pred EeCCcCcccccccEEEEEe
Confidence 95 44544 555666654
No 462
>3o3u_N Maltose-binding periplasmic protein, advanced Gly END product-specific receptor; RAGE, AGER, scavenger receptor; HET: MLR; 1.50A {Escherichia coli} PDB: 3s59_A 3s58_A 3cjj_A 2l7u_A* 2e5e_A
Probab=99.18 E-value=2.6e-11 Score=93.27 Aligned_cols=92 Identities=13% Similarity=0.023 Sum_probs=64.2
Q ss_pred ecceEEEecCCcEEEEEEE-ccCCCCEEEEEecCCCeEEEecceE---EcCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 12 FGQISTGFLAVFSYSDKTV-RDIVKVRVSWVRRRDWHILTSGVLT---YTNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v-~~~~~~~V~W~k~~~~~~l~~~~~~---~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
...++++.+|++++|+|.+ .+.+.+.|.|||......+...... ..-..|+.+. .+.+|.|.+++.+|+|.
T Consensus 372 l~~~~~~~~G~~v~L~C~~~~~~~~~~v~W~k~~~~~~~~~~~~~~~~~~~~~r~~~~-----~~~~L~i~~v~~~D~G~ 446 (581)
T 3o3u_N 372 SAQNITARIGEPLVLKCKGAPKKPPQRLEWKLNTGRTEAWKVLSPQGGGPWDSVARVL-----PNGSLFLPAVGIQDEGI 446 (581)
T ss_dssp CCEEEEEETTSCEEECCTTCCSSSSCEEEEEEEETTSSSCEECCSCCSSGGGGTSEEC-----TTSCEEESSCCGGGCEE
T ss_pred HhcccceecCCcEEEeeeecCCCCCceEEEEEcCCeeEEEEecccCCCCCcCCcEEEc-----CCceEEEeccccccCeE
Confidence 4566889999999999999 6677789999997532111100000 0013466654 24489999999999999
Q ss_pred EEEeecC-CCCe-eEEEEeceec
Q psy14080 88 YECQAQP-YTTT-SHSQNAPGLG 108 (113)
Q Consensus 88 Y~C~~~~-~~~~-s~~~~L~V~g 108 (113)
|+|.+.. .... +..++|.|..
T Consensus 447 Y~C~~~n~~~~~~~~~~~l~V~~ 469 (581)
T 3o3u_N 447 FRCQAMNRNGKETKSNYRVRVYQ 469 (581)
T ss_dssp EEEEEECTTSCEEEEEEEEEEEB
T ss_pred EEEEEEcCCCceeEEEEEEEEEc
Confidence 9999954 3444 6778888865
No 463
>2yd9_A Receptor-type tyrosine-protein phosphatase S; hydrolase; HET: NAG B3P; 2.60A {Homo sapiens}
Probab=99.18 E-value=7.9e-11 Score=83.53 Aligned_cols=83 Identities=11% Similarity=0.003 Sum_probs=57.6
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
.....+.+|+++.|.|.+.+.+.+.|.|+|. +..+. .+.++. .+...|.|.++ +|+|.|+|.+
T Consensus 212 ~~~~~v~~G~~v~l~C~~~g~p~p~v~W~~~--~~~l~-------~~~~~~------~~~~~L~i~~~--~d~G~Y~C~a 274 (304)
T 2yd9_A 212 PMSHEIMPGGNVNITCVAVGSPMPYVKWMQG--AEDLT-------PEDDMP------VGRNVLELTDV--KDSANYTCVA 274 (304)
T ss_dssp CCCBCCCTTCCEEEEEEEEEESCCEEEEEET--TEECS-------CSSSCC------BSEEEEEECSC--CSCEEEEEEE
T ss_pred CCceEEcCCCeEEEEEEEeeeCCCEEEEEEC--CEECC-------Cccccc------CCcEEEEEccc--ccCEEEEEEE
Confidence 3446788999999999999988899999984 33321 122221 24567888877 6999999999
Q ss_pred -cCCCCeeEEEEeceeccccc
Q psy14080 93 -QPYTTTSHSQNAPGLGDLLM 112 (113)
Q Consensus 93 -~~~~~~s~~~~L~V~g~~~~ 112 (113)
+..+..+..+.|.|.+...+
T Consensus 275 ~N~~G~~~~~~~l~V~~~~~~ 295 (304)
T 2yd9_A 275 MSSLGVIEAVAQITVKSLPKA 295 (304)
T ss_dssp EETTEEEEEEEEEC-------
T ss_pred EeCCCcEEEEEEEEEecCccc
Confidence 56678888999999887653
No 464
>1fnl_A Low affinity immunoglobulin gamma FC region receptor III-B; beta sandwich, immunoglobulin-like, immune system receptor; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1e4j_A 1e4k_C* 1t83_C* 1t89_C* 3ay4_C*
Probab=99.18 E-value=5.2e-11 Score=78.70 Aligned_cols=75 Identities=12% Similarity=0.022 Sum_probs=56.5
Q ss_pred EEEecCCcEEEEEEEccCCC-CEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecC
Q psy14080 16 STGFLAVFSYSDKTVRDIVK-VRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 16 ~tv~~G~~a~L~C~v~~~~~-~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 94 (113)
..+.+|+++.|.|.+.+.+. +.+.|+|. +..+. ... ....|.|.+++.+|+|.|.|.+..
T Consensus 98 ~~~~~g~~~~l~C~~~~~~~~~~~~W~k~--g~~~~-------------~~~----~~~~L~i~~v~~~d~G~Y~C~a~n 158 (175)
T 1fnl_A 98 WVFKEEDPIHLRCHSWKNTALHKVTYLQN--GKDRK-------------YFH----HNSDFHIPKATLKDSGSYFCRGLV 158 (175)
T ss_dssp SEEETTCCEEEEEEECTTCCCEEEEEEET--TEEEE-------------EEE----ECCCEEESSCCGGGCEEEEEEEEE
T ss_pred ceecCCCCEEEEEEcCCCCCceEEEEEEC--CeEcc-------------CCC----CCCEEEEcccChhhCeEEEEEEEc
Confidence 56889999999999987654 49999984 22221 011 245899999999999999999954
Q ss_pred -C-CCeeEEEEeceecc
Q psy14080 95 -Y-TTTSHSQNAPGLGD 109 (113)
Q Consensus 95 -~-~~~s~~~~L~V~g~ 109 (113)
. ...+..+.|.|.|.
T Consensus 159 ~~~~~~s~~~~l~V~~~ 175 (175)
T 1fnl_A 159 GSKNVSSETVNITITQA 175 (175)
T ss_dssp TTEEEECCCEEEEEECC
T ss_pred CCCCccCccEEEEEeCC
Confidence 3 35677888988874
No 465
>1bih_A Hemolin; insect immunity, LPS-binding, homophilic adhesion; 3.10A {Hyalophora cecropia} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4
Probab=99.18 E-value=1.6e-10 Score=84.23 Aligned_cols=87 Identities=10% Similarity=0.066 Sum_probs=62.4
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
.....+.+|+++.|.|.+.+.+.+.+.|+|.. ..+.. ....|+... ......+|.|.+++.+|+|.|.|.+
T Consensus 219 ~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~g--~~~~~-----~~~~~~~~~--~~~~~~~L~i~~~~~~d~G~Y~C~a 289 (395)
T 1bih_A 219 SKDMMAKAGDVTMIYCMYGSNPMGYPNYFKNG--KDVNG-----NPEDRITRH--NRTSGKRLLFKTTLPEDEGVYTCEV 289 (395)
T ss_dssp CCSEEEETTSCEEEEEEEECSSCCCCEEEETT--EECCC-----CTTSSEESC--SSSTTSEEEESSCCGGGCEEEEEEE
T ss_pred CCceEEECCCcEEEEEEeccCCCCeEEEEECC--EEcCC-----CCceeEEEE--ecCCCceEEEccCChhhCEEEEEEE
Confidence 45678999999999999998888899999843 22211 123454432 1223458999999999999999999
Q ss_pred cC-CCC-eeEEEEeceec
Q psy14080 93 QP-YTT-TSHSQNAPGLG 108 (113)
Q Consensus 93 ~~-~~~-~s~~~~L~V~g 108 (113)
.. .+. .+..+.|.|..
T Consensus 290 ~n~~g~~~~~~~~l~V~~ 307 (395)
T 1bih_A 290 DNGVGKPQKHSLKLTVVS 307 (395)
T ss_dssp CCSSSSCEEEEEEEEEEE
T ss_pred EeCCCCceEEEEEEEEEc
Confidence 54 344 34478888864
No 466
>3s97_C Contactin-1; carbonic anhdyrase like immunoglobulin, cell adhesion comple adhesion; HET: NAG; 2.30A {Homo sapiens}
Probab=99.17 E-value=1.6e-11 Score=81.57 Aligned_cols=75 Identities=16% Similarity=0.040 Sum_probs=54.9
Q ss_pred eEeecceEEEecCCcEEEEEE-EccCCC-CEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKT-VRDIVK-VRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNG 86 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~-v~~~~~-~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G 86 (113)
.......+++.+|+++.|.|. +.+.+. +.+.|+|.+..... ..+.|.... ..+.+|.|.+++.+|+|
T Consensus 11 ~~~~~~~~~v~~G~~v~L~C~~~~~~p~~~~v~W~~~~~~~~~-------~~~~~~~~~----~~~~~L~i~~v~~~d~G 79 (201)
T 3s97_C 11 PPEERPEVRVKEGKGMVLLCDPPYHFPDDLSYRWLLNEFPVFI-------TMDKRRFVS----QTNGNLYIANVEASDKG 79 (201)
T ss_dssp CSSCCCCEEEETTCCEEECCCCCSEESSCCEEEEEESSTTCBC-------CCSSSEEEC----TTTCCEEESSCCGGGCE
T ss_pred CcCCCceEEEECCCCEEEeccccccCCCceEEEEEECCceeee-------eeCCCeEEE----cCCCeEEECcCCcccCe
Confidence 344456789999999999999 777777 89999985432211 123344332 13568999999999999
Q ss_pred EEEEeecC
Q psy14080 87 TYECQAQP 94 (113)
Q Consensus 87 ~Y~C~~~~ 94 (113)
.|.|.+..
T Consensus 80 ~Y~C~~~~ 87 (201)
T 3s97_C 80 NYSCFVSS 87 (201)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEe
Confidence 99999954
No 467
>4fom_A Poliovirus receptor-related protein 3; immunoglobulin-like domain, IG domain, cell adhesion; HET: NAG BMA MAN FUC; 3.93A {Homo sapiens}
Probab=99.17 E-value=1.3e-11 Score=87.71 Aligned_cols=90 Identities=11% Similarity=-0.065 Sum_probs=64.4
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCC-EEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKV-RVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~-~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
|+.+.........+.+|++++|.|.+.+.+.+ .+.|+|.+.. + . +. .. ..++..|.|.+++.+
T Consensus 211 ~P~~~~~~~~~~~~~~g~~v~l~C~~~g~P~p~~v~W~k~~~~-~-~--------~~-~~-----~~~~~~l~i~~v~~~ 274 (308)
T 4fom_A 211 APEVSVTGYDGNWFVGRKGVNLKCNADANPPPFKSVWSRLDGQ-W-P--------DG-LL-----ASDNTLHFVHPLTFN 274 (308)
T ss_dssp EEEECCBCCCSCEETTCCSCEEECCEEEESCEEEEECCBSSSC-C-C--------SS-CB-----CSTTEEECCSCCCSC
T ss_pred CCeeEEcccceeeeeccccEEEEEEEecCCCCcEEEEEECCeE-C-C--------Cc-EE-----EcCCeEEEECCCChh
Confidence 34444333444567789999999999988877 6999985421 1 0 11 11 124567889999999
Q ss_pred CCEEEEEee-cCCCCeeEEEEeceeccc
Q psy14080 84 DNGTYECQA-QPYTTTSHSQNAPGLGDL 110 (113)
Q Consensus 84 D~G~Y~C~~-~~~~~~s~~~~L~V~g~~ 110 (113)
|+|.|.|.+ +..+..+..+.|.|...=
T Consensus 275 d~G~Y~C~A~N~~G~~~~~~~l~V~~~P 302 (308)
T 4fom_A 275 YSGVYICKVTNSLGQRSDQKVIYISDPP 302 (308)
T ss_dssp CCSEEEEEEEETTEEEEEEEECCEECCC
T ss_pred hCEEEEEEEEeCCCcEEEEEEEEEEcCC
Confidence 999999999 566888889999997643
No 468
>3qs7_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, CY receptor complex, extracellular complex; HET: NAG; 4.30A {Homo sapiens}
Probab=99.17 E-value=2.6e-10 Score=85.79 Aligned_cols=86 Identities=12% Similarity=0.070 Sum_probs=60.4
Q ss_pred ceEEEecCCcEEEEEEEcc-CCCCEEEEEecCCCeEEEecce---EEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 14 QISTGFLAVFSYSDKTVRD-IVKVRVSWVRRRDWHILTSGVL---TYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~-~~~~~V~W~k~~~~~~l~~~~~---~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
.+..+.+|+++.|.|.+.+ .+.+.|.|+|... . +..+.. ......|... ...+|.|.+++.+|+|.|.
T Consensus 235 ~~~~v~~G~~v~L~C~~~g~~p~p~i~W~k~g~-~-l~~~~~~~~~~~~~~~~~~------~~~~L~I~~v~~~D~G~Y~ 306 (423)
T 3qs7_E 235 PQLFLKVGEPLWIRCKAVHVNHGFGLTWELENK-A-LEEGNYFEMSTYSTNRTMI------RILFAFVSSVARNDTGYYT 306 (423)
T ss_dssp TEEEEETTSCEEEEEEEEESSSCCCEEEEESSS-B-CCGGGEEEEEEEETTTEEE------EEEEEEESSCCTTTCEEEE
T ss_pred CceEEeCCCeEEEEEEEEcCCCCcEEEEEECCE-E-ccccceeecccccCCceeE------EEEEEEEeecCHHHCEEEE
Confidence 3578899999999999998 5668999998542 1 111100 0001223222 2458999999999999999
Q ss_pred EeecCCCCeeEEEEeceecc
Q psy14080 90 CQAQPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 90 C~~~~~~~~s~~~~L~V~g~ 109 (113)
|.+... .+..+.|.|...
T Consensus 307 C~A~N~--~~~~~~L~V~~~ 324 (423)
T 3qs7_E 307 CSSSKH--PSQSALVTIVEK 324 (423)
T ss_dssp EEETTE--EEEEEEEEEESS
T ss_pred EEEecC--CCceEEEEEEeC
Confidence 999665 777888888653
No 469
>2v9r_A Roundabout homolog 1; proto-oncogene, differentiation, phosphorylation, disease MU neuronal development, immunoglobulin domain, chemotaxis; 2.00A {Homo sapiens} PDB: 2v9q_A
Probab=99.17 E-value=2.5e-11 Score=81.40 Aligned_cols=96 Identities=14% Similarity=0.137 Sum_probs=59.3
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCE-EEEEeCCCCc--EEEEEccCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARF-QVIHTDGSDD--WNLQIKFLQ 81 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~-~~~~~~~~~~--~~L~I~~v~ 81 (113)
|+.+. .....+++.+|+++.|.|.+.+.+.+.+.|||.. ..+.... .+.+. ... ..++.. ..|.|.+++
T Consensus 9 pp~i~-~~p~~~~v~~G~~v~l~C~~~~~p~~~v~W~~~~--~~~~~~~----~~~~~~~~~-~~~~~~~~~~l~i~~~~ 80 (212)
T 2v9r_A 9 PPRIV-EHPSDLIVSKGEPATLNCKAEGRPTPTIEWYKGG--ERVETDK----DDPRSHRML-LPSGSLFFLRIVHGRKS 80 (212)
T ss_dssp EEEEE-ECCCCEEECTTCCEEECCEEEEESCCEEEEEETT--EECCCTT----TCTTCSEEE-CTTSCEEESSCCCCSSC
T ss_pred Cccee-cCCCceEEeCCCcEEEEEEcCCCCCCEEEEEECC--EEeeccc----cccccceEE-ecCCcEEEEEEEecCCC
Confidence 44444 4556789999999999999998888899999843 2222110 11111 111 111222 245667889
Q ss_pred CCCCEEEEEeecCC-CCe-eEEEEeceec
Q psy14080 82 KRDNGTYECQAQPY-TTT-SHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~-~~~-s~~~~L~V~g 108 (113)
.+|+|.|.|.+... +.. +..+.|.|..
T Consensus 81 ~~d~G~Y~C~~~n~~g~~~~~~~~l~V~~ 109 (212)
T 2v9r_A 81 RPDEGVYVCVARNYLGEAVSHDASLEVAI 109 (212)
T ss_dssp CCSCEEEEEEEEETTEEEECCCEEEEECE
T ss_pred cccCeEEEEEEECCCCceeecceEEEEEe
Confidence 99999999999543 322 3455665543
No 470
>4hwn_A FC receptor-like A; FCRLA, FCRL, IG-C2 domain, IG superfamily, immune system, ST genomics, PSI-biology; 2.01A {Homo sapiens}
Probab=99.17 E-value=9.8e-11 Score=72.97 Aligned_cols=87 Identities=16% Similarity=0.080 Sum_probs=56.2
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCC-----EEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEcc
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKV-----RVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKF 79 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~-----~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~ 79 (113)
|+..+...+.. .+.+|++++|.|.....+.. .+.|||. +..+. ... ....|.|.+
T Consensus 7 ~kP~l~~~p~~-~v~~G~~VtL~C~~~~~~~~~~~~~~~~w~k~--g~~l~-------------~~~----~~~~l~i~~ 66 (108)
T 4hwn_A 7 PAPILRAVPSA-EPQAGSPMTLSCQTKLPLQRSAARLLFSFYKD--GRIVQ-------------SRG----LSSEFQIPT 66 (108)
T ss_dssp CCCEEEEESCS-SCBTTCCEEEEEEC---------CCEEEEEET--TEEEE-------------EEE----SCCEEEESS
T ss_pred CCCEEEecCCC-cCCCCCcEEEEEcccCCCCCcCcceEEEEEEC--CcCcc-------------CCC----cccEEEeCc
Confidence 45555554432 47889999999998754433 3899983 22221 011 245899999
Q ss_pred CCCCCCEEEEEeecCC-C---CeeEEEEeceecccc
Q psy14080 80 LQKRDNGTYECQAQPY-T---TTSHSQNAPGLGDLL 111 (113)
Q Consensus 80 v~~~D~G~Y~C~~~~~-~---~~s~~~~L~V~g~~~ 111 (113)
++.+|+|.|.|.+... + ..|..+.|.|.|..+
T Consensus 67 v~~~dsG~Y~C~~~~~~~~~~~~S~~l~L~V~g~~~ 102 (108)
T 4hwn_A 67 ASEDHSGSYWCEAATEDNQVWKQSPQLEIRVQGASA 102 (108)
T ss_dssp CCGGGCEEEEEEEECTTSSSEEECCCEEECCBC---
T ss_pred cCcccCeEEEEEEEeCCCceeccCCCEEEEEEecch
Confidence 9999999999999643 2 457789999998653
No 471
>2ec8_A MAST/stem cell growth factor receptor; glycoprotein, receptor tyrosine kinase, growth factor cytoki dimerization, transferase; HET: NAG; 3.00A {Homo sapiens} PDB: 2e9w_A*
Probab=99.16 E-value=5.2e-10 Score=84.90 Aligned_cols=91 Identities=12% Similarity=0.097 Sum_probs=62.9
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCE-EEEEecCCCe-EEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEE
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVR-VSWVRRRDWH-ILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYE 89 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~-V~W~k~~~~~-~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~ 89 (113)
......+.+|++++|.|.+.+.+.+. +.|+|..... +.......+..+.++. ...+|.|.+++.+|+|.|.
T Consensus 217 ~~~~~~v~~G~~v~L~C~~~g~p~p~~i~W~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~L~I~~~~~~D~G~Y~ 289 (524)
T 2ec8_A 217 SKASYLLREGEEFTVTCTIKDVSSSVYSTWKRENSQTKLQEKYNSWHHGDFNYE-------RQATLTISSARVNDSGVFM 289 (524)
T ss_dssp SCSEEEEETTSCEEEEEEEEESSTTCEEEEEETTCSCCCCEEEEEEECSSSCEE-------EEEEEEESSCCTTTCEEEE
T ss_pred cCCcceEEcCCcEEEEEEEecCCCcEEEEEEeCCCCCccccccccccccCCccc-------eEEEEEECCCCHHHCEEEE
Confidence 34456899999999999999887776 9999965331 1111111111111221 3579999999999999999
Q ss_pred Eeec-CCCCeeEEEEeceecc
Q psy14080 90 CQAQ-PYTTTSHSQNAPGLGD 109 (113)
Q Consensus 90 C~~~-~~~~~s~~~~L~V~g~ 109 (113)
|.+. ..+..+..+.|.|...
T Consensus 290 C~a~n~~g~~~~~~~l~V~~~ 310 (524)
T 2ec8_A 290 CYANNTFGSANVTTTLEVVDK 310 (524)
T ss_dssp EEEECSSCEEEEEEEEEEESS
T ss_pred EEEEecCCceEEEEEEEEecc
Confidence 9995 4566667888888653
No 472
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.16 E-value=2e-10 Score=80.48 Aligned_cols=91 Identities=12% Similarity=0.017 Sum_probs=58.6
Q ss_pred ecceEEEecCCcEEEEEEEccCCC-CEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEE
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVK-VRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYEC 90 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~-~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C 90 (113)
......+.+|+++.|.|.+.+.+. ..+.|++... .+...........++. ...+|.|.+++.+|+|.|+|
T Consensus 192 ~~~~~~~~~g~~v~l~C~~~~~~~~~~~~w~~~~~--~~~~~~~~~~~~~~~~-------~~~~L~i~~v~~~d~G~Y~C 262 (292)
T 4dkd_C 192 VPAELVRIRGEAAQIVCSASSVDVNFDVFLQHNNT--KLAIPQQSDFHNNRYQ-------KVLTLNLDQVDFQHAGNYSC 262 (292)
T ss_dssp ESSCBCCCSSSCEEEEEEEEESSSCCEEECCBSSC--CCCCCBEEEEETTEEE-------EEEEEEESSCCTTSCEEEEE
T ss_pred cCCceeEecCCCEEEEEEecCCCCceEEEEeCCCc--ccccCccceeccceee-------eEEEEEECccChhcCeEEEE
Confidence 333455679999999999987653 4677766432 1111111111123332 24699999999999999999
Q ss_pred ee-cCCCCeeEEEEeceecccc
Q psy14080 91 QA-QPYTTTSHSQNAPGLGDLL 111 (113)
Q Consensus 91 ~~-~~~~~~s~~~~L~V~g~~~ 111 (113)
.+ +..+..+..+.|.|++...
T Consensus 263 ~a~N~~g~~~~~~~l~V~~~~~ 284 (292)
T 4dkd_C 263 VASNVQGKHSTSMFFRVVESAG 284 (292)
T ss_dssp EEECSSCEEEEEEEECC-----
T ss_pred EEecCCCCceeEEEEEEeeCCC
Confidence 99 4567888999999988653
No 473
>3sgj_C Human FCG3A receptor; receptor complex, FC receptor, antibody, immune system; HET: NAG BMA MAN FUC; 2.20A {Homo sapiens} PDB: 3sgk_C*
Probab=99.16 E-value=8.8e-11 Score=80.08 Aligned_cols=75 Identities=11% Similarity=0.000 Sum_probs=55.1
Q ss_pred EEEecCCcEEEEEEEccC-CCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecC
Q psy14080 16 STGFLAVFSYSDKTVRDI-VKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 16 ~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 94 (113)
..+.+|++++|.|.+.+. +.+.+.|+|.. ..+. ... ...+|.|.+++.+|+|.|+|.+..
T Consensus 98 ~~v~~G~~v~L~C~~~~~~p~~~v~W~k~g--~~~~-------------~~~----~~~~L~i~~v~~~D~G~Y~C~a~n 158 (204)
T 3sgj_C 98 WVFKEEDPIHLRCHSWKNTALHKVTYLQNG--KGRK-------------YFH----HNSDFYIPKATLKDSGSYFCRGLV 158 (204)
T ss_dssp SEEETTCCEEEEEEEGGGCCCEEEEEEETT--EEEE-------------EEE----ECCCEEESSCCGGGCEEEEEEEEE
T ss_pred eeEeCCCcEEEEEEecCCCCCceEEEEECC--cEee-------------ccc----CCceEEECcCCcccCEEEEEEEEe
Confidence 578899999999999654 56789999842 2221 011 244899999999999999999954
Q ss_pred -C-CCeeEEEEeceecc
Q psy14080 95 -Y-TTTSHSQNAPGLGD 109 (113)
Q Consensus 95 -~-~~~s~~~~L~V~g~ 109 (113)
. ...+..+.|.|.+.
T Consensus 159 ~~~~~~s~~~~l~V~~~ 175 (204)
T 3sgj_C 159 GSKNVSSETVQITITQG 175 (204)
T ss_dssp TTEEEECCCEEEEEEC-
T ss_pred CCCceecCcEEEEEeCc
Confidence 2 35567788888764
No 474
>1ugn_A LIR1, leukocyte immunoglobulin-like receptor 1; immunoglobulin-like folds, immune system; 1.80A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 3d2u_D* 1g0x_A 1p7q_D 1ufu_A 1vdg_A 2gw5_A 2dyp_D 2otp_A 3q2c_A
Probab=99.16 E-value=1.7e-11 Score=82.38 Aligned_cols=90 Identities=13% Similarity=-0.032 Sum_probs=59.4
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+..++.... .++.+|++++|.|.+.+.+. .+.|+|... .+... ...+.. .....+|.|.+++.+|
T Consensus 4 ~~P~i~~~p~-~~v~~G~~v~L~C~~~~~~~-~~~W~k~g~--~~~~~-----~~~~~~-----~~~~~~L~i~~v~~~D 69 (198)
T 1ugn_A 4 PKPTLWAEPG-SVITQGSPVTLRCQGGQETQ-EYRLYREKK--TAPWI-----TRIPQE-----LVKKGQFPIPSITWEH 69 (198)
T ss_dssp CCCEEEEESC-SEEETTCCEEEEEECCTTCC-CEEEEESSS--CCHHH-----HTSCHH-----HHTTTEEEESSCCGGG
T ss_pred CCCeEeccCC-CcccCCCcEEEEEEecCCCc-EEEEEECCc--ccccc-----cccccc-----CCcccEEEECCCCHHH
Confidence 3444444444 48999999999999987765 699998532 11100 011100 1135689999999999
Q ss_pred CEEEEEeecCCC----CeeEEEEeceec
Q psy14080 85 NGTYECQAQPYT----TTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~~----~~s~~~~L~V~g 108 (113)
+|.|.|.+.... ..+..+.|.|.+
T Consensus 70 ~G~Y~C~a~n~~~g~~~~s~~~~l~V~~ 97 (198)
T 1ugn_A 70 TGRYRCYYGSDTAGRSESSDPLELVVTG 97 (198)
T ss_dssp CEEEEEEEEETTTEECCCCCCEEEEEEC
T ss_pred CeEEEEEEECCCCCcccCCccEEEEEcc
Confidence 999999995432 335667787776
No 475
>4dkd_C Macrophage colony-stimulating factor 1 receptor; dimeric four-helix bundle cytokine, receptor tyrosine kinase glycosylation; HET: NAG BMA; 3.00A {Homo sapiens}
Probab=99.15 E-value=2.7e-11 Score=84.96 Aligned_cols=91 Identities=18% Similarity=0.063 Sum_probs=64.4
Q ss_pred CCceeeEeecceEEEecCCcEEEEEEEccCCC--CEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCC
Q psy14080 4 APGGILTAFGQISTGFLAVFSYSDKTVRDIVK--VRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 4 ~p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~--~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
.|+.........+.+.+|+++.|.|.+.+ +. +.|.|+|.++. .+ ..+.|+... .+..|.|.+++
T Consensus 87 ~~~~~~~~~~~~~~v~~g~~v~l~C~~~~-~~~~~~v~W~~~~~~-~~-------~~~~~~~~~-----~~~~L~i~~~~ 152 (292)
T 4dkd_C 87 DPARPWNVLAQEVVVFEDQDALLPCLLTD-PVLEAGVSLVRVRGR-PL-------MRHTNYSFS-----PWHGFTIHRAK 152 (292)
T ss_dssp CSSCCEEESCSEEEEETTSCEECCEEESS-GGGGSSEEEEEGGGC-CC-------CSSCCEECC-----SSSCCEETTCC
T ss_pred CccccccccCCeEEEcCCCcEEEeeeCCC-CCcceeEEEEecCCC-cc-------ccCCccccc-----CCceEEECCCC
Confidence 34554455566788999999999999997 43 67999986422 21 234566543 23349999999
Q ss_pred CCCCEEEEEeecCC-C-CeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPY-T-TTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~-~-~~s~~~~L~V~g 108 (113)
.+|+|.|+|.+... . ..+..+.|.|.+
T Consensus 153 ~~d~G~Y~C~a~n~~~~~~s~~~~l~V~~ 181 (292)
T 4dkd_C 153 FIQSQDYQCSALMGGRKVMSISIRLKVQK 181 (292)
T ss_dssp GGGCSEEEEEECSTTSCEECCCEEEEEEC
T ss_pred HHHCeEEEEEEEeCCCceeEEEEEEEEeC
Confidence 99999999999643 3 334567888775
No 476
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.15 E-value=5.4e-11 Score=85.76 Aligned_cols=79 Identities=13% Similarity=0.106 Sum_probs=58.6
Q ss_pred EEecCCcEEEEEEEccCC-CCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecC-
Q psy14080 17 TGFLAVFSYSDKTVRDIV-KVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQP- 94 (113)
Q Consensus 17 tv~~G~~a~L~C~v~~~~-~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~- 94 (113)
.+.+|+++.|.|.+.+.+ .+.|.|||.. ..+. ..+.||... +.+|.|.+++.+|+|.|+|.+..
T Consensus 139 ~~~~G~~v~L~C~~~g~p~~~~i~W~k~~--~~l~------~~~~~~~~~------~~~L~I~~v~~~D~G~Y~C~a~n~ 204 (329)
T 3oq3_B 139 GTHDKYGIDLYCGILYAKHYNNITWYKNN--QELI------IDGTKYSQS------GQNLIIHNPELEDSGRYDCYVHYD 204 (329)
T ss_dssp TSSTTTCEEEECCCCSCCCCCEEEEEETT--EECC------CSSSSEEEE------TTEEEECSCCGGGCEEEEEEEEEC
T ss_pred EEeCCCcEEEEeccCCCCCCceEEEEECC--ccCC------CCCceEecC------CCEEEEeecChhhCEEEEEEEEec
Confidence 457799999999999988 8999999843 2221 135677654 35899999999999999999953
Q ss_pred --CCC----eeEEEEeceecc
Q psy14080 95 --YTT----TSHSQNAPGLGD 109 (113)
Q Consensus 95 --~~~----~s~~~~L~V~g~ 109 (113)
.+. .+..+.|.|.+.
T Consensus 205 ~~~g~~~~~~s~~~~l~V~~~ 225 (329)
T 3oq3_B 205 DVRIKNDIVVSRCKILTVIPS 225 (329)
T ss_dssp CTTSSSCEEEEEEEEEEEECC
T ss_pred ccCCCceeEEEeeEEEEEECC
Confidence 222 234477888654
No 477
>3oq3_B IFN-alpha/beta binding protein C12R; mousepox virus, moscow strain, cytokine decoy RE virus/viral protein, type-1 interferon, soluble A/B-IFNR; HET: EPE; 2.10A {Ectromelia virus}
Probab=99.14 E-value=4e-10 Score=81.15 Aligned_cols=88 Identities=14% Similarity=0.109 Sum_probs=62.3
Q ss_pred ecceEEEecCCcEEEEEEEccCC---CC-EEEEEecCCCeEEEecceEEcCCCCEEEE--EeCCCCcEEEEEccCCCCCC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIV---KV-RVSWVRRRDWHILTSGVLTYTNDARFQVI--HTDGSDDWNLQIKFLQKRDN 85 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~---~~-~V~W~k~~~~~~l~~~~~~~~~~~R~~~~--~~~~~~~~~L~I~~v~~~D~ 85 (113)
.+..+.+.+|++++|.|.+.+.+ .+ .|.|+|.. ..++. .+.+.... .+......+|.|.+++.+|+
T Consensus 234 ~~~~~~v~~G~~~~l~C~~~g~p~~~~~i~v~W~~~g-~~i~~-------~~~~~~~~~~~~~~~~~~~L~I~~v~~~D~ 305 (329)
T 3oq3_B 234 LDPKINVTIGEPANITCTAVSTSLLVDDVLIDWENPS-GWIIG-------LDFGVYSILTSSGGITEATLYFENVTEEYI 305 (329)
T ss_dssp CCSEEEECTTSCEEEEEEEEETTCCTTCCEEEEECTT-SCBCC-------BCSSEEEEEEEETTEEEEEEEESSCCGGGT
T ss_pred cCCeeEEecCCCEEEEEEEEECCCCCCCcEEEEEECC-eeeec-------cCCceeeeecccCceeEeEEEEEeccHHHC
Confidence 45568899999999999999887 66 88999853 22221 12222111 01111367999999999999
Q ss_pred E-EEEEeec-CCCCeeEEEEecee
Q psy14080 86 G-TYECQAQ-PYTTTSHSQNAPGL 107 (113)
Q Consensus 86 G-~Y~C~~~-~~~~~s~~~~L~V~ 107 (113)
| .|+|.+. ..+..+..+.|.|+
T Consensus 306 G~~Y~C~a~N~~G~~~~~~~l~v~ 329 (329)
T 3oq3_B 306 GNTYTCRGHNYYFDKTLTTTVVLE 329 (329)
T ss_dssp TCEEEEEEECSSCEEEEEEEEEEC
T ss_pred CCcEEEEEEecCCceEEEEEEEeC
Confidence 9 9999994 56777788888774
No 478
>2d3v_A Leukocyte immunoglobulin-like receptor subfamily A member 5 isoform 1; immunoglobulin-like fold, immune system; 1.85A {Homo sapiens}
Probab=99.14 E-value=6.5e-11 Score=79.56 Aligned_cols=81 Identities=14% Similarity=0.025 Sum_probs=46.4
Q ss_pred EEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecCC
Q psy14080 16 STGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQPY 95 (113)
Q Consensus 16 ~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~~ 95 (113)
..+.+|++++|.|.+.+.+ +.+.|+|... .+..... .. ... .......+|.|.+++.+|+|.|.|.+...
T Consensus 109 ~~v~~G~~v~L~C~~~~~p-~~~~W~k~g~-~~~~~~~-----~~--~~~-~~~~~~~~L~I~~v~~~D~G~Y~C~a~n~ 178 (196)
T 2d3v_A 109 PVVTSGENVTLQCGSRLRF-DRFILTEEGD-HKLSWTL-----DS--QLT-PSGQFQALFPVGPVTPSHRWMLRCYGSRR 178 (196)
T ss_dssp --------CEEEEEESSCC-SEEEEEEC----CCEEEE-----EC--EEC-TTSCEEEEEECCCCBTTBCEEEEEEEEET
T ss_pred ccccCCCcEEEEEEcCCCC-CEEEEEccCC-ccccccc-----cc--ccc-cCCCceeEEEeeecCcccCeeEEEEEEcc
Confidence 4788999999999999887 8999998542 1110000 00 011 01123579999999999999999999532
Q ss_pred ------CCeeEEEEece
Q psy14080 96 ------TTTSHSQNAPG 106 (113)
Q Consensus 96 ------~~~s~~~~L~V 106 (113)
...|..+.|.|
T Consensus 179 ~~~~~~s~~S~~~~l~V 195 (196)
T 2d3v_A 179 HILQVWSEPSDLLEIPV 195 (196)
T ss_dssp TEEEEECCCCCCEEECC
T ss_pred CCCCccCCCCccEEEEe
Confidence 13455666665
No 479
>1ry7_B FGFR-3, fibroblast growth factor receptor 3; FGF-FGFR complex, beta trefoil, IG domain, growth factor/growth factor receptor complex; 3.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.13 E-value=2.7e-11 Score=86.70 Aligned_cols=84 Identities=14% Similarity=0.226 Sum_probs=61.7
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeec-
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQ- 93 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~- 93 (113)
...+.+|+++.|.|.+.+.+.+.|.|+|.. ..+. .+.|+.... .....++|.|.+++.+|+|.|.|.+.
T Consensus 132 ~~~v~~g~~v~l~C~~~g~p~~~v~W~~~~--~~~~-------~~~~~~~~~-~~~~~~~L~i~~v~~~d~G~Y~C~a~n 201 (334)
T 1ry7_B 132 LLAVPAANTVRFRCPAAGNPTPSISWLKNG--REFR-------GEHRIGGIK-LRHQQWSLVMESVVPSDRGNYTCVVEN 201 (334)
T ss_dssp EEEEETTCCEEEECCCCCSSCCEEECCBTT--BCCC-------TTSSTTCCC-CCTTTTEEEECSCCGGGCCCEEEEEEE
T ss_pred eEEecCCCcEEEEEEccCCCCCeEEEEECC--EECc-------cccccccee-cccceEEEEECCCCcccCEEEEEEEEe
Confidence 467889999999999998888899999843 2221 122221111 12356799999999999999999994
Q ss_pred CCCCeeEEEEeceec
Q psy14080 94 PYTTTSHSQNAPGLG 108 (113)
Q Consensus 94 ~~~~~s~~~~L~V~g 108 (113)
..+..+..+.|.|..
T Consensus 202 ~~g~~~~~~~l~V~~ 216 (334)
T 1ry7_B 202 KFGSIRQTYTLDVLE 216 (334)
T ss_dssp TTEEEEEEEEEEEEC
T ss_pred CCCCEEEEEEEEEec
Confidence 446667778888875
No 480
>2jll_A NCAM2, neural cell adhesion molecule 2; immunoglobulin domain, immunoglobulin superfamily, transmembrane, phosphoprotein, membrane, glycoprotein; HET: NAG; 2.30A {Homo sapiens} PDB: 2xyc_A* 2jlk_A* 2doc_A
Probab=99.13 E-value=4.1e-10 Score=81.98 Aligned_cols=84 Identities=17% Similarity=0.154 Sum_probs=62.6
Q ss_pred eEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeec-
Q psy14080 15 ISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQ- 93 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~- 93 (113)
.+.+.+|+++.|.|.+.+.+.+.|.|+|. +..+.. ....|+.+.. +....+|.|.+++.+|+|.|.|.+.
T Consensus 109 ~~~~~~g~~~~l~C~~~g~p~~~i~W~~~--g~~l~~-----~~~~~~~~~~--~~~~~~L~i~~~~~~d~G~Y~C~a~N 179 (389)
T 2jll_A 109 IYYSWEGNPINISCDVKSNPPASIHWRRD--KLVLPA-----KNTTNLKTYS--TGRKMILEIAPTSDNDFGRYNCTATN 179 (389)
T ss_dssp EEEECTTCCEEEEECEEEESCCEEEEEET--TEESSC-----TTCTTEEEEE--CSSCEEEEECCCSTTSSEEEEEEEEE
T ss_pred eEEeccCCEEEEEEEEEecCCCeEEEEEC--CccCCc-----ccCceEEEec--cCCEEEEEECCCChhhCEEEEEEEEc
Confidence 34678999999999999988899999984 333221 1234777653 3456799999999999999999994
Q ss_pred CCCCeeEEEEecee
Q psy14080 94 PYTTTSHSQNAPGL 107 (113)
Q Consensus 94 ~~~~~s~~~~L~V~ 107 (113)
..+..+..+.|.|.
T Consensus 180 ~~G~~~~~~~l~v~ 193 (389)
T 2jll_A 180 HIGTRFQEYILALA 193 (389)
T ss_dssp TTEEEEEEEEEEEC
T ss_pred CCCcEEEEEEEEec
Confidence 55566666666654
No 481
>1rhf_A Tyrosine-protein kinase receptor TYRO3; AXL/TYRO3 family, cellular adhesion, ligand-independent DIME mutational analysis, transferase; HET: EPE; 1.96A {Homo sapiens} SCOP: b.1.1.1 b.1.1.4
Probab=99.13 E-value=3.7e-10 Score=74.29 Aligned_cols=75 Identities=8% Similarity=-0.024 Sum_probs=55.3
Q ss_pred cceEEEecCCcEEEEEEEccCCCC-EEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKV-RVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~-~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
.....+.+|+++.|.|.+.+.+.+ .+.|+|.. ..+. ... ....+|.|.++ +|+|.|+|.
T Consensus 105 ~~~~~~~~g~~~~l~C~~~g~p~p~~v~W~~~~--~~~~--------~~~--------~~~~~L~i~~~--~d~G~Y~C~ 164 (182)
T 1rhf_A 105 PKDLAVPPNAPFQLSCEAVGPPEPVTIVWWRGT--TKIG--------GPA--------PSPSVLNVTGV--TQSTMFSCE 164 (182)
T ss_dssp CCCEEECTTCCEEEEEEEECSSSCCEEEEEETT--EECS--------CSE--------ESSEEEEECCC--SSCEEEEEE
T ss_pred CcceEecCCCEEEEEeEecCCCCCCEEEEEcCC--eECC--------CCC--------CCceEEEEecc--ccCeEEEEE
Confidence 445788999999999999998888 99999843 2221 110 04679999998 599999999
Q ss_pred ec-CCCCe-eEEEEecee
Q psy14080 92 AQ-PYTTT-SHSQNAPGL 107 (113)
Q Consensus 92 ~~-~~~~~-s~~~~L~V~ 107 (113)
+. ..+.. +..+.|.|+
T Consensus 165 a~N~~g~~~s~~~~l~Vk 182 (182)
T 1rhf_A 165 AHNLKGLASSRTATVHLQ 182 (182)
T ss_dssp EEETTEEEECCCEEEEEC
T ss_pred EECCCCCcccceEEEEeC
Confidence 95 44444 357777764
No 482
>3v2a_R Vascular endothelial growth factor receptor 2; IG-homology domain, vegfr-2, growth factor receptor, VEGF LI hormone-signaling protein complex, angiogenesis; 3.20A {Homo sapiens} PDB: 3v6b_R
Probab=99.13 E-value=5.2e-12 Score=99.28 Aligned_cols=83 Identities=19% Similarity=0.218 Sum_probs=0.0
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA- 92 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~- 92 (113)
.+.++.+|++++|.|.+.+.+.+.|.|+|.. ..+. .+.|+.+.. +..+|.|.+++.+|+|.|.|.+
T Consensus 674 ~~~~v~~g~~~~l~C~~~g~P~p~v~W~k~g--~~l~-------~~~~~~~~~----~~~~L~I~~v~~~D~G~Y~C~a~ 740 (772)
T 3v2a_R 674 ENQTTSIGESIEVSCTASGNPPPQIMWFKDN--ETLV-------EDSGIVLKD----GNRNLTIRRVRKEDEGLYTCQAC 740 (772)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CceEEeCCCCEEEEEEeCccCCCeEEEEECC--eECc-------CCCCeEEcC----CCcEEEECcCCHHHCEEEEEEEE
Confidence 4577899999999999999888999999843 2221 234555432 3569999999999999999999
Q ss_pred cCCCCeeEEEEeceecc
Q psy14080 93 QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 93 ~~~~~~s~~~~L~V~g~ 109 (113)
+..+..+..+.|.|.|.
T Consensus 741 N~~G~~~~~~~l~V~~~ 757 (772)
T 3v2a_R 741 SVLGCAKVEAFFIIEGA 757 (772)
T ss_dssp -----------------
T ss_pred eCCcceeEEEEEEEECC
Confidence 55678888899999874
No 483
>2aw2_A B and T lymphocyte attenuator; IGI domain, IGG domain, TNFRSF, protein-protein complex, IMM system; HET: NAG FUL; 2.80A {Homo sapiens} SCOP: b.1.1.1
Probab=99.12 E-value=1.6e-09 Score=68.02 Aligned_cols=93 Identities=16% Similarity=0.123 Sum_probs=66.5
Q ss_pred ceEEEecCCcEEEEEEEccC-CCCEEEEEecCCCeEEEecceEEcCCCCEEE-EEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 14 QISTGFLAVFSYSDKTVRDI-VKVRVSWVRRRDWHILTSGVLTYTNDARFQV-IHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~-~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~-~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
...++..|++..|.|.+.+. ..|.|.|-|.++..-+.. ..|.+. ....+-..|.|++.+|-++|+|.|.|.
T Consensus 19 S~hsv~~G~~f~leCpv~yc~~rP~VtWcKln~~~c~~L-------~~~~q~w~E~~N~s~fvLhf~~V~~sDsGsYRCs 91 (120)
T 2aw2_A 19 SEHSILAGDPFELECPVKYCANRPHVTWCKLNGTTCVKL-------EDRQTSWKEEKNISFFILHFEPVLPNDNGSYRCS 91 (120)
T ss_dssp EEEEEETTSCEEEEEEEECSSSCCEEEEEEECSSCEEEC-------CSSCEEEEECSSCEEEEEEESSCCGGGCEEEEEE
T ss_pred ccceEecCCeEEEEccEEeccCCCceEEEecCCceEEEC-------ccccccceecCCeeEEEEEEeeeeEcCCcceEEE
Confidence 34688999999999999984 789999998765333221 223331 111222368999999999999999999
Q ss_pred ecCCC--CeeEEEEeceecccccC
Q psy14080 92 AQPYT--TTSHSQNAPGLGDLLMH 113 (113)
Q Consensus 92 ~~~~~--~~s~~~~L~V~g~~~~~ 113 (113)
++... ..|..+.+.|.|..--|
T Consensus 92 An~~sg~ieSHsvtI~Vt~~~~~~ 115 (120)
T 2aw2_A 92 ANFQSNLIESHSTTLYVTDVKHHH 115 (120)
T ss_dssp EEETTEEEECCCEEEEEECGGGCC
T ss_pred eeCCCCcEEeeEEEEEEEeccccc
Confidence 97543 44777888888876543
No 484
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.11 E-value=5.3e-11 Score=92.03 Aligned_cols=80 Identities=8% Similarity=-0.028 Sum_probs=60.9
Q ss_pred ceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-
Q psy14080 14 QISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA- 92 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~- 92 (113)
..+.+.+|+++.|.|.+.+.+.+.|.|+|. +..+. .+.|+. .+.++|.|.+++.+|+|.|+|.+
T Consensus 334 ~~~~v~~G~~v~L~C~~~g~P~p~i~W~k~--g~~l~-------~~~~~~------~~~~~L~I~~v~~~D~G~YtC~A~ 398 (527)
T 3qs9_E 334 EDYEIDQYEEFCFSVRFKAYPQIRCTWTFS--RKSFP-------CEQKGL------DNGYSISKFCNHKHQPGEYIFHAE 398 (527)
T ss_dssp CEECCCTTCCCCEEEEEEEESCCEEEEEET--TEEEE-------CBCCBC------SSSSEEEEECCCTTCCSCEEEEEE
T ss_pred ccEEEcCCCeEEEEEEEEecCCCEEEEEEC--CEECc-------CCcccc------cCCcEEEEecCCcccCEEEEEEEE
Confidence 456788999999999999999999999983 44442 122321 14668999999999999999999
Q ss_pred cCCCCeeEEEEeceec
Q psy14080 93 QPYTTTSHSQNAPGLG 108 (113)
Q Consensus 93 ~~~~~~s~~~~L~V~g 108 (113)
+..+..+..+.|.|..
T Consensus 399 N~~g~~~~~~~L~V~~ 414 (527)
T 3qs9_E 399 NDDAQFTKMFTLNIRR 414 (527)
T ss_dssp ETTEEEEEEEEEC--C
T ss_pred eCCCcEEEEEEEEEec
Confidence 4556777788998874
No 485
>1cs6_A Axonin-1; neural cell adhesion, cell adhesion; 1.80A {Gallus gallus} SCOP: b.1.1.4 b.1.1.4 b.1.1.4 b.1.1.4 PDB: 2om5_A
Probab=99.11 E-value=2.2e-10 Score=83.31 Aligned_cols=87 Identities=15% Similarity=0.127 Sum_probs=64.6
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+.+.........+.+|+++.|.|.+.+.+.+.+.|+|.+.. + ..++ .....+|.|.+++.+|
T Consensus 206 ~P~~~~~~~~~~~~~~G~~v~l~C~~~g~p~~~i~W~~~~~~--~---------~~~~------~~~~~~L~i~~~~~~d 268 (382)
T 1cs6_A 206 APSIKAKFPADTYALTGQMVTLECFAFGNPVPQIKWRKLDGS--Q---------TSKW------LSSEPLLHIQNVDFED 268 (382)
T ss_dssp EEEEEECCCSEEEEETTCCEEEECEEEEESCCEEEEEECCSC--C---------SCCC------SBSSSEEEECSCCGGG
T ss_pred CCceeccCCCceEEeCCCeEEEEEEEccCCCCEEEEEECCcc--c---------ccEE------ecCCcEEEEccCChhh
Confidence 344444445678899999999999999888889999985422 1 0111 1235689999999999
Q ss_pred CEEEEEeec-CCCCeeEEEEeceec
Q psy14080 85 NGTYECQAQ-PYTTTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~-~~~~~s~~~~L~V~g 108 (113)
+|.|.|.+. ..+..+..+.|.|..
T Consensus 269 ~G~Y~C~a~n~~g~~~~~~~l~V~~ 293 (382)
T 1cs6_A 269 EGTYECEAENIKGRDTYQGRIIIHA 293 (382)
T ss_dssp CEEEEEEEEETTEEEEEEEEEEEEE
T ss_pred CEEEEEEEEcCCCeEEEEEEEEEec
Confidence 999999994 556667778887764
No 486
>1f2q_A High affinity immunoglobulin epsilon receptor ALP subunit; immunoglobulin fold, glycoprotein, IGE-binding Pro immune system; HET: NAG MAN; 2.40A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4 PDB: 1j86_A* 1rpq_A* 2y7q_A* 1f6a_A* 1j88_A* 1j89_A* 1j87_A*
Probab=99.11 E-value=1.7e-10 Score=76.10 Aligned_cols=77 Identities=14% Similarity=0.071 Sum_probs=57.1
Q ss_pred EEEecCCcEEEEEEEc-cCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeecC
Q psy14080 16 STGFLAVFSYSDKTVR-DIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQP 94 (113)
Q Consensus 16 ~tv~~G~~a~L~C~v~-~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~~ 94 (113)
..+.+|+++.|.|.+. +.+.+.+.|+|. +..+. ......+|.|.+++.+|+|.|+|.+..
T Consensus 95 ~~~~~g~~~~l~C~~~~~~p~~~~~W~~~--g~~~~-----------------~~~~~~~L~i~~v~~~d~G~Y~C~a~n 155 (176)
T 1f2q_A 95 EVVMEGQPLFLRCHGWRNWDVYKVIYYKD--GEALK-----------------YWYENHNISITNATVEDSGTYYCTGKV 155 (176)
T ss_dssp SEEETTSCEEEEEEEGGGCCEEEEEEEET--TEECC-----------------SCCCSSEEEESSCCGGGCEEEEEEEEE
T ss_pred ceeeCCCCEEEEEEecCCCCceEEEEEEC--CEEEe-----------------eecCCCeEEECCCCcccCEEEEEEEEe
Confidence 4678999999999994 556679999983 22221 011345999999999999999999954
Q ss_pred --CCCeeEEEEeceecccc
Q psy14080 95 --YTTTSHSQNAPGLGDLL 111 (113)
Q Consensus 95 --~~~~s~~~~L~V~g~~~ 111 (113)
....+..+.|.|.+.-.
T Consensus 156 ~~~~~~s~~~~l~V~~~p~ 174 (176)
T 1f2q_A 156 WQLDYESEPLNITVIKAPR 174 (176)
T ss_dssp TTEEEECCCEEEEEECSCC
T ss_pred CCcceEecCEEEEEecCCC
Confidence 23456678888887543
No 487
>2vol_A Murine IGG FC; FC, zinc, B30.2, nucleus, pryspry, cytoplasm, mouse IGG, zinc-finger, DNA-binding, RNA-binding, tripartite motif (TRIM) protein; HET: NAG MAN GAL FUC; 1.95A {Mus musculus} PDB: 3hkf_A 1i1a_C* 1cqk_A
Probab=99.10 E-value=3.9e-11 Score=81.59 Aligned_cols=69 Identities=16% Similarity=0.199 Sum_probs=47.9
Q ss_pred EecCCcEEEEEEEccCC----CCEEEEEecCCCeEEEecc--eEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEe
Q psy14080 18 GFLAVFSYSDKTVRDIV----KVRVSWVRRRDWHILTSGV--LTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 18 v~~G~~a~L~C~v~~~~----~~~V~W~k~~~~~~l~~~~--~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~ 91 (113)
+.+|++++|.|.+.+.+ ...|.|||.+ ..+..... .....+.+|.. ..+|.|.+++.+|+|.|+|.
T Consensus 15 v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~-------~~~L~I~~~~~~D~G~Y~C~ 86 (207)
T 2vol_A 15 LTITLTPKVTCVVVDISKDDPEVQFSWFVDD-VEVHTAQTKPREEQFNSTFRS-------VSELPIMHQDWLNGKEFKCR 86 (207)
T ss_dssp HSTTSCCEEEEEEEEECTTCCCCEEEEEETT-EEECCCEEECCCEETTTEEEE-------EEEEECCHHHHHTTCCEEEE
T ss_pred hccCCceEEEEEEeCcccCCCceEEEEEECC-ccccccccCCCcCcCCCcEEE-------EEEEEEehhHcCCCCEEEEE
Confidence 78999999999998773 3489999965 22211100 00112344432 34899999999999999999
Q ss_pred ecC
Q psy14080 92 AQP 94 (113)
Q Consensus 92 ~~~ 94 (113)
+..
T Consensus 87 a~~ 89 (207)
T 2vol_A 87 VNS 89 (207)
T ss_dssp EEC
T ss_pred EEc
Confidence 964
No 488
>1p6f_A NKP46, natural cytotoxicity triggering receptor 1; natural cytotoxicity receptor, NK cell receptor, immunoglobulin fold, immune system; 2.20A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.10 E-value=6.8e-10 Score=77.94 Aligned_cols=90 Identities=10% Similarity=-0.045 Sum_probs=60.6
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+..++..... .+.+|++|+|.|.... ....+.|||.. ..+... ..+.. ......+|.|.+++.+|
T Consensus 6 ~kP~i~~~P~~-~v~~G~~VtL~C~~~~-~~~~~~w~k~g--~~~~~~------~~~~~----~~~~~~~L~I~~v~~~D 71 (242)
T 1p6f_A 6 PKPFIWAEPHF-MVPKEKQVTICCQGNY-GAVEYQLHFEG--SLFAVD------RPKPP----ERINKVKFYIPDMNSRM 71 (242)
T ss_dssp CCCEEEEESCS-EEETTCCEEEEEECCT-TCCEEEEEETT--EEEEEE------CCSSC----TTCCEEEEEECSCCGGG
T ss_pred CCCEEEeeCCC-ccCCCCcEEEEEeeCC-CCcEEEEEECC--Cccccc------ccccc----CCcceeEEEecCCCccc
Confidence 55555555555 8999999999999875 34678999843 222110 01110 12346799999999999
Q ss_pred CEEEEEeecCC---CCeeEEEEeceec
Q psy14080 85 NGTYECQAQPY---TTTSHSQNAPGLG 108 (113)
Q Consensus 85 ~G~Y~C~~~~~---~~~s~~~~L~V~g 108 (113)
+|.|.|.+... ...+..+.|.|.|
T Consensus 72 sG~Y~C~~~~~~~~s~~S~~~~L~V~~ 98 (242)
T 1p6f_A 72 AGQYSCIYRVGELWSEPSNLLDLVVTE 98 (242)
T ss_dssp CEEEEEEEEETTEECCCCCCEEEEEEC
T ss_pred CeEEEEEEecCCccccCCcceEEEeec
Confidence 99999999532 1335667777775
No 489
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.10 E-value=4.9e-10 Score=86.96 Aligned_cols=73 Identities=16% Similarity=0.008 Sum_probs=57.2
Q ss_pred cceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee
Q psy14080 13 GQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA 92 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~ 92 (113)
..+.++.+|++++|.|.+.+.+.+.|.|+|. +..+. ...+|.|.+++.+|+|.|.|.+
T Consensus 566 ~~~~~v~~g~~~~l~C~~~g~p~p~v~W~~~--g~~i~--------------------~~~~L~i~~~~~~d~G~Y~C~a 623 (642)
T 1e07_A 566 PPDSSYLSGANLNLSCHSASNPSPQYSWRIN--GIPQQ--------------------HTQVLFIAKITPNNNGTYACFV 623 (642)
T ss_pred CCceeEEcCCcEEEEEEeccCCCCeEEEEEC--CEECc--------------------cCceEEECcccccCCeEEEEEE
Confidence 4567899999999999999999899999983 22221 1238999999999999999999
Q ss_pred c-CCCCeeEEEEecee
Q psy14080 93 Q-PYTTTSHSQNAPGL 107 (113)
Q Consensus 93 ~-~~~~~s~~~~L~V~ 107 (113)
. ..+..+..+.|.|.
T Consensus 624 ~N~~G~~~~s~~l~V~ 639 (642)
T 1e07_A 624 SNLATGRNNSIVKSIT 639 (642)
T ss_pred EecccCcceeEEEEEE
Confidence 4 55666666666664
No 490
>3rjd_A High affinity immunoglobulin gamma FC receptor I; immune system; HET: NAG MAN FUC P33; 2.65A {Homo sapiens}
Probab=99.09 E-value=4.2e-10 Score=77.55 Aligned_cols=78 Identities=14% Similarity=0.061 Sum_probs=56.7
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCC-EEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKV-RVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~-~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
++..+..+++.+|+++.|.|.+.+.+.+ .+.|+|. +..+. ....+|.|.+++.+|+|.
T Consensus 4 i~~~p~~~~v~~G~~v~l~C~~~~~~~~~~~~W~~~--g~~~~-------------------~~~~~l~i~~~~~~d~G~ 62 (262)
T 3rjd_A 4 ITLQPPWVSVFQEETVTLHCEVLHLPGSSSTQWFLN--GTATQ-------------------TSTPSYRITSASVNDSGE 62 (262)
T ss_dssp EEESSCCSEEETTCCEEEEEECSSCCCTTCEEEEET--TEECS-------------------CCSSEEEESSCCGGGCEE
T ss_pred EecCCCcEEeeCCCeEEEEEECCCCCCCceEEEEEC--CEEee-------------------ccCCeEEEecCCcccCeE
Confidence 4445566789999999999999888766 8999983 22211 124479999999999999
Q ss_pred EEEeecCCCCeeEEEEeceec
Q psy14080 88 YECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 88 Y~C~~~~~~~~s~~~~L~V~g 108 (113)
|.|.+... ..+..+.|.|..
T Consensus 63 Y~C~~~~~-~~s~~~~l~v~~ 82 (262)
T 3rjd_A 63 YRCQRGLS-GRSDPIQLEIHR 82 (262)
T ss_dssp EEEEESSS-CCCCCEEEEEEC
T ss_pred EEEEEecC-CccccEEEEEec
Confidence 99999542 233345666653
No 491
>3ry4_A Low affinity immunoglobulin gamma FC region recep; FC receptor, CD32, immunoglobulin superfamily, low responder polymorphism, cell membrane; HET: NAG; 1.50A {Homo sapiens} PDB: 1fcg_A 3ry5_A 1h9v_A 3d5o_F* 3ry6_C* 2fcb_A
Probab=99.09 E-value=4.4e-10 Score=73.29 Aligned_cols=74 Identities=15% Similarity=0.053 Sum_probs=53.3
Q ss_pred eEEEecCCcEEEEEEEc-cCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEeec
Q psy14080 15 ISTGFLAVFSYSDKTVR-DIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQAQ 93 (113)
Q Consensus 15 ~~tv~~G~~a~L~C~v~-~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~~ 93 (113)
...+.+|+++.|.|.+. +.+.+.+.|+|. +..+. .. .....|.|.+++.+|+|.|+|.+.
T Consensus 94 ~~~~~~g~~~~l~C~~~~~~p~~~~~W~~~--g~~~~-------------~~----~~~~~L~i~~v~~~d~G~Y~C~a~ 154 (170)
T 3ry4_A 94 HLEFQEGETIMLRCHSWKDKPLVKVTFFQN--GKSQK-------------FS----HLDPTFSIPQANHSHSGDYHCTGN 154 (170)
T ss_dssp CSEECTTCCEEEEEEEGGGCCEEEEEEEET--TEEEE-------------EE----SSCCEEEESSCCGGGCEEEEEEEE
T ss_pred CceeecCCeEEEEEECCCCCCCceEEEEEC--CeEcc-------------cc----CCCCeEEEEeccccCCEEEEEEEE
Confidence 45678999999999994 556688999983 22221 11 124479999999999999999995
Q ss_pred -CCCC-eeEEEEecee
Q psy14080 94 -PYTT-TSHSQNAPGL 107 (113)
Q Consensus 94 -~~~~-~s~~~~L~V~ 107 (113)
..+. .+..+.|.|.
T Consensus 155 n~~g~~~s~~~~l~V~ 170 (170)
T 3ry4_A 155 IGYTLFSSKPVTITVQ 170 (170)
T ss_dssp ETTEEEECCCEEEEEC
T ss_pred eCcCccccccEEEEEC
Confidence 3343 4666777663
No 492
>3bp6_B Programmed cell death 1 ligand 2; PD-1, PD-L2, complex, costimulation, glycoprotein, immunoglo domain, membrane, transmembrane, receptor; 1.60A {Mus musculus} PDB: 3bp5_B 3rnq_B 3bov_A 3rnk_B
Probab=99.08 E-value=5.8e-10 Score=74.70 Aligned_cols=81 Identities=12% Similarity=-0.041 Sum_probs=56.0
Q ss_pred EEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEEEEee-cCC
Q psy14080 17 TGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTYECQA-QPY 95 (113)
Q Consensus 17 tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y~C~~-~~~ 95 (113)
.+.+|+++.|.|.+.+.+.+.|.|+|.... +. .++ ....++....|.|.+++.+|+|.|+|.+ +..
T Consensus 114 ~~~~g~~v~l~C~~~g~P~p~v~W~~~~~~-~~----------~~~--~~~~~~~~~~~~i~~v~~~d~G~Y~C~a~N~~ 180 (202)
T 3bp6_B 114 EVPGTGEVQLTCQARGYPLAEVSWQNVSVP-AN----------TSH--IRTPEGLYQVTSVLRLKPQPSRNFSCMFWNAH 180 (202)
T ss_dssp ECTTTCCEEEEEEEEEBSCCEEEETTCCSC-CE----------EEE--EECTTSCEEEEEEEEECCCTTCCEEEEEEETT
T ss_pred ecCCCCeEEEEEEccccCCceEEEEeCCCC-cc----------Cce--eeCCCCCEEEEEEEEEEcCCCCEEEEEEEcCC
Confidence 446799999999999988999999874321 11 001 1111222346678899999999999999 566
Q ss_pred CCeeEEEEeceeccc
Q psy14080 96 TTTSHSQNAPGLGDL 110 (113)
Q Consensus 96 ~~~s~~~~L~V~g~~ 110 (113)
+..+..+.|.|.+..
T Consensus 181 g~~~~~~~l~v~~~~ 195 (202)
T 3bp6_B 181 MKELTSAIIDPLSRM 195 (202)
T ss_dssp TTEEEEEEECC----
T ss_pred cccccEEEEEecCcC
Confidence 788888899887653
No 493
>2rgs_A I, IG gamma-2B heavy chain; FC-fragment, immunoglobulin, glycosylation, immune system; HET: NAG FUC MAN GAL; 2.13A {Mus musculus}
Probab=99.08 E-value=3.3e-11 Score=82.70 Aligned_cols=82 Identities=13% Similarity=0.192 Sum_probs=53.5
Q ss_pred CceeeEeecceEE-EecCCcEEEEEEEccCC----CCEEEEEecCCCeEEEec--ceEEcCCCCEEEEEeCCCCcEEEEE
Q psy14080 5 PGGILTAFGQIST-GFLAVFSYSDKTVRDIV----KVRVSWVRRRDWHILTSG--VLTYTNDARFQVIHTDGSDDWNLQI 77 (113)
Q Consensus 5 p~~i~~~~~~~~t-v~~G~~a~L~C~v~~~~----~~~V~W~k~~~~~~l~~~--~~~~~~~~R~~~~~~~~~~~~~L~I 77 (113)
|+.|...-..... +.+|++|+|.|.+.+.+ .+.|.|||.+ ..+.... ......+.+|.. ..+|+|
T Consensus 9 ~p~v~~~pp~~~~~v~~G~~v~L~C~~~g~~~~p~~~~v~W~k~~-~~~~~~~~~~~~~~~~~~~~~-------~~~L~I 80 (218)
T 2rgs_A 9 GPSVFIFPPNIKDVLMISLTPKVTCVVVDVSEDDPDVQISWFVNN-VEVHTAQTQTHREDYNSTIRV-------VSTLPI 80 (218)
T ss_dssp CCEEEEECCCHHHHHCTTSCCEEEEEEEEECTTSCCEEEEEEETT-EEECCCEEEEEEETTTTEEEE-------EEEEEC
T ss_pred CCEEEEECcCHHHhhccCCCeeEEEEEcCCccCCCceEEEEEECC-ccccCcccccccccCCCeEEE-------EEEEEE
Confidence 4455544333222 78999999999998763 3789999965 2221100 001112445543 348999
Q ss_pred ccCCCCCCEEEEEeecC
Q psy14080 78 KFLQKRDNGTYECQAQP 94 (113)
Q Consensus 78 ~~v~~~D~G~Y~C~~~~ 94 (113)
.+++.+|+|.|+|.+..
T Consensus 81 ~~~~~~D~g~Y~C~~~~ 97 (218)
T 2rgs_A 81 QHQDWMSGKEFKCKVNN 97 (218)
T ss_dssp CHHHHHTTCCEEEEEEE
T ss_pred cHHHcCCCCeEEEEEEC
Confidence 99999999999999954
No 494
>4f80_A Butyrophilin subfamily 3 member A1; B7 superfamily, CD277, immune system; 1.94A {Homo sapiens} PDB: 4f9l_A* 4f9p_A 4f8t_A 4f8q_A
Probab=99.07 E-value=4.8e-10 Score=76.57 Aligned_cols=86 Identities=8% Similarity=0.078 Sum_probs=54.3
Q ss_pred ceEEEecCCcEEEEEEEcc-CCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcE-EEEEccCCCCCCEEEEEe
Q psy14080 14 QISTGFLAVFSYSDKTVRD-IVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDW-NLQIKFLQKRDNGTYECQ 91 (113)
Q Consensus 14 ~~~tv~~G~~a~L~C~v~~-~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~-~L~I~~v~~~D~G~Y~C~ 91 (113)
....+.+|+.+.|.|.+.+ .+.+.|.|+|.+ +.++... ..+ ... ...+.+ .+.|.+++.+|+|.|+|.
T Consensus 126 ~~~~~~~g~~v~l~c~~~g~~P~p~i~W~k~~-~~~~~~~------~~~--~~~-~~~g~~~v~s~l~v~~~d~G~YtC~ 195 (226)
T 4f80_A 126 VDVKGYKDGGIHLECRSTGWYPQPQIQWSNNK-GENIPTV------EAP--VVA-DGVGLYAVAASVIMRGSSGEGVSCT 195 (226)
T ss_dssp EEEEEEETTEEEEEEEEEEEBSCCEEEEECTT-SCBCCCE------ECC--CEE-CTTSCEEEEEEEEECC----CEEEE
T ss_pred ceeeeccCCceeeEEEeccCCCCCEEEEEECC-ceEcCCC------ceE--EEE-CCCCcEEEEEEEEechhcCcEEEEE
Confidence 3456788999999999987 488999999854 2222211 011 111 112222 344667889999999999
Q ss_pred e-cCCCCeeEEEEeceecc
Q psy14080 92 A-QPYTTTSHSQNAPGLGD 109 (113)
Q Consensus 92 ~-~~~~~~s~~~~L~V~g~ 109 (113)
+ +..+..+..+.|.|.+.
T Consensus 196 a~N~~g~~~~~~~v~v~ep 214 (226)
T 4f80_A 196 IRSSLLGLEKTASISIADP 214 (226)
T ss_dssp EEETTTTEEEEEEECCCTT
T ss_pred EEeCCCCeEEEEEEEECCC
Confidence 9 45677888889988754
No 495
>1b6u_A KIR2DL3, P58 killer cell inhibitory receptor; natural killer cell, HLA, major histocompatibility complex class I (MHC class I); 3.00A {Homo sapiens} SCOP: b.1.1.4 b.1.1.4
Probab=99.06 E-value=1.5e-09 Score=77.01 Aligned_cols=93 Identities=14% Similarity=-0.031 Sum_probs=60.5
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRD 84 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D 84 (113)
|+..+..... ..+.+|++++|.|.... +...+.|||........ . ...++. ....+.+|.|.+++.+|
T Consensus 6 ~kP~i~~~P~-~~V~~G~~VtL~C~~~~-~~~~~~W~k~g~~~~~~-~-----~~~~~~----~~~~~~~L~I~~v~~~D 73 (257)
T 1b6u_A 6 RKPSLLAHPG-PLVKSEETVILQCWSDV-RFQHFLLHREGKFKDTL-H-----LIGEHH----DGVSKANFSIGPMMQDL 73 (257)
T ss_dssp CCCEECCBSC-SEEESSCCEEEEEEESS-CCSEEEEEEESTTCEEE-E-----EECBCC----TTCEEEEEEECSCCTTT
T ss_pred CCCEEEEcCC-CEecCCCCEEEEEecCC-CCcEEEEEECCCCCCcc-e-----eeeecc----CCCceEEEEeecCCccc
Confidence 4444444443 57899999999999974 45789999965321110 0 001110 12246799999999999
Q ss_pred CEEEEEeecC-C-----CCeeEEEEeceecc
Q psy14080 85 NGTYECQAQP-Y-----TTTSHSQNAPGLGD 109 (113)
Q Consensus 85 ~G~Y~C~~~~-~-----~~~s~~~~L~V~g~ 109 (113)
+|.|.|.+.. . ...+..+.|.|.+.
T Consensus 74 sG~Y~C~a~~~~~~~~~s~~S~~~~L~V~~~ 104 (257)
T 1b6u_A 74 AGTYRCYGSVTHSPYQLSAPSDPLDIVITGL 104 (257)
T ss_dssp CEEEEEEEECSSCTTSCCCCCCCEEEEEECS
T ss_pred CEEEEEeEeccCCCccccccCCCEEEecccC
Confidence 9999999842 1 13356678888763
No 496
>2o26_X MAST/stem cell growth factor receptor; stem cell factor, receptor tyrosine kinase, class III, recep ligand complex, cytokine, 4-helix bundle; HET: NAG FUL MAN NDG; 2.50A {Mus musculus}
Probab=99.06 E-value=2.4e-10 Score=80.38 Aligned_cols=88 Identities=17% Similarity=0.094 Sum_probs=62.2
Q ss_pred CceeeEeecceEEEecCCcEEEEEEEccCCC-CEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCC
Q psy14080 5 PGGILTAFGQISTGFLAVFSYSDKTVRDIVK-VRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKR 83 (113)
Q Consensus 5 p~~i~~~~~~~~tv~~G~~a~L~C~v~~~~~-~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~ 83 (113)
|+.+. .....+.+.+|+++.|.|.+.+ +. +.|.|++.++. .+ ..+.|+... ....|.|.+++.+
T Consensus 91 ~~~~~-~~~~~~~~~~g~~v~l~C~~~~-p~~~~v~W~~~~g~-~l-------~~~~~~~~~-----~~~~L~i~~v~~~ 155 (290)
T 2o26_X 91 PAKLF-LVGLPLFGKEDSDALVRCPLTD-PQVSQYSLIECDGK-SL-------PTDLTFVPN-----PKAGITIKNVKRA 155 (290)
T ss_dssp SSCCB-CCCCCEEEETTSCEEECCCBSC-CSCEEEEEEETTSC-CC-------CTTCEEEEE-----TTTEEEEESCCGG
T ss_pred CCccc-ccccceEEecCCeEEEeCcCCC-CCCceEEEEeCCCc-CC-------CCCCceeeC-----CCCCEEEecccHH
Confidence 33333 3455678899999999999996 66 89999876532 22 234566654 2348999999999
Q ss_pred CCE-EEEEeecCCCC--eeEEEEecee
Q psy14080 84 DNG-TYECQAQPYTT--TSHSQNAPGL 107 (113)
Q Consensus 84 D~G-~Y~C~~~~~~~--~s~~~~L~V~ 107 (113)
|+| .|.|.+..... .+..+.|.|.
T Consensus 156 d~G~~Y~C~a~n~~~~~~s~~~~l~V~ 182 (290)
T 2o26_X 156 YHRLCVRCAAQRDGTWLHSDKFTLKVR 182 (290)
T ss_dssp GTTCEEEEEEEETTEEEECCCEEEEEE
T ss_pred HCCCEEEEEEEECCceEEeEEEEEEEE
Confidence 999 99999964332 2345677765
No 497
>3mjg_X Beta-type platelet-derived growth factor receptor; protein-protein complex, growth factor-receptor complex, TRA hormone complex; HET: NDG NAG; 2.30A {Homo sapiens}
Probab=99.06 E-value=5.4e-10 Score=78.44 Aligned_cols=83 Identities=16% Similarity=0.038 Sum_probs=55.3
Q ss_pred eEeecceEEEecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEEE
Q psy14080 9 LTAFGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGTY 88 (113)
Q Consensus 9 ~~~~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~Y 88 (113)
++.....+++.+|++++|.|.+.+. |.|+|.... + +.|+.... .+....+|.|.+++.+|+|.|
T Consensus 3 i~~~~~~~~v~~G~~v~L~C~~~~~----v~W~~~~~~-~----------~~~~~~~~-~~~~~~~L~i~~~~~~D~G~Y 66 (289)
T 3mjg_X 3 VTPPGPELVLNVSSTFVLTCSGSAP----VVWERMSQE-P----------PQEMAKAQ-DGTFSSVLTLTNLTGLDTGEY 66 (289)
T ss_dssp BCSSCSEEECCTTCCEEEEEEESSC----CEEEBTTBC-C----------SEEEEECT-TSCEEEEEEECSCCGGGCEEE
T ss_pred ecCCCCeEEEeCCCcEEEEEeccce----EEEECCCCC-c----------ccceeccC-CCceeEEEEEccCChhhCEEE
Confidence 3445567889999999999999864 999985421 1 12222211 111246999999999999999
Q ss_pred EEeecC-CCC---eeEEEEecee
Q psy14080 89 ECQAQP-YTT---TSHSQNAPGL 107 (113)
Q Consensus 89 ~C~~~~-~~~---~s~~~~L~V~ 107 (113)
.|.+.. .+. .+..++|.|.
T Consensus 67 ~C~a~n~~g~~~~~~~~~~v~v~ 89 (289)
T 3mjg_X 67 FCTHNDSRGLETDERKRLYIFVP 89 (289)
T ss_dssp EEECCC------CCCEEEEEECC
T ss_pred EEEEcccCCCCcCcEEeEEEEEE
Confidence 999954 222 3455666655
No 498
>1jbj_A CD3 epsilon and gamma ectodomain fragment complex; beta-sheet, C2-SET immunoglobulin superfamily, H-bonded G strand PAIR, single-chain; NMR {Mus musculus} SCOP: b.1.1.4 b.1.1.4 PDB: 1xmw_A
Probab=99.06 E-value=4e-10 Score=75.60 Aligned_cols=68 Identities=15% Similarity=0.109 Sum_probs=48.2
Q ss_pred EecCCcEEEEEEEccCCCCEEEEEecCCCeEEEecceEEcCCCCEEEEEeCCCCcEEEEEcc-CCCCCCEEEEEeec-CC
Q psy14080 18 GFLAVFSYSDKTVRDIVKVRVSWVRRRDWHILTSGVLTYTNDARFQVIHTDGSDDWNLQIKF-LQKRDNGTYECQAQ-PY 95 (113)
Q Consensus 18 v~~G~~a~L~C~v~~~~~~~V~W~k~~~~~~l~~~~~~~~~~~R~~~~~~~~~~~~~L~I~~-v~~~D~G~Y~C~~~-~~ 95 (113)
+.+|++++|.|.+.+ + +.|.|+|. +..+.. + .+.+|.|.+ ++.+|+|.|.|.+. ..
T Consensus 11 ~~~G~~v~L~C~~~~-~-~~i~W~k~--g~~l~~-------~-----------~~~~L~I~~~~~~~D~G~Y~C~a~n~~ 68 (186)
T 1jbj_A 11 SISGTSVELTCPLDS-D-ENLKWEKN--GQELPQ-------K-----------HDKHLVLQDFSEVEDSGYYVCYTPASN 68 (186)
T ss_dssp EEETTEEEEECSSCC-C-TTCEEEET--TEEECS-------C-----------CCSEEEEESCCTTTSCEEEEEECSSCC
T ss_pred EeCCcEEEEEEeCCC-C-CceEEEEC--CEECCC-------C-----------CCCEEEECCCCccccCEEEEEEEEeCC
Confidence 467999999999987 3 34999983 333211 1 233899999 99999999999995 44
Q ss_pred CCeeEEEEecee
Q psy14080 96 TTTSHSQNAPGL 107 (113)
Q Consensus 96 ~~~s~~~~L~V~ 107 (113)
+..+..+.+.|.
T Consensus 69 g~~~~~~~~~v~ 80 (186)
T 1jbj_A 69 KNTYLYLKARVG 80 (186)
T ss_dssp CCCCEEECCCCC
T ss_pred CcEEEEEEEEEe
Confidence 555555555543
No 499
>1e07_A Carcinoembryonic antigen; glycoprotein, CEA, tumour marker, immunoglobulin-fold; NMR {Homo sapiens} PDB: 2dks_A
Probab=99.05 E-value=4.7e-10 Score=87.10 Aligned_cols=92 Identities=12% Similarity=-0.019 Sum_probs=61.7
Q ss_pred ecceEEEecCCcEEEEEEEccCCCCEEEEEecCCC----eEEEe--cceEEcC----CCCEEEEEeCCCCcEEEEEccCC
Q psy14080 12 FGQISTGFLAVFSYSDKTVRDIVKVRVSWVRRRDW----HILTS--GVLTYTN----DARFQVIHTDGSDDWNLQIKFLQ 81 (113)
Q Consensus 12 ~~~~~tv~~G~~a~L~C~v~~~~~~~V~W~k~~~~----~~l~~--~~~~~~~----~~R~~~~~~~~~~~~~L~I~~v~ 81 (113)
.+..+.+.+|++|+|+|.....+...|.|||.... .+... +...... .+|+.+. .+.+|.|.+++
T Consensus 5 ~p~~~~v~~G~~v~L~C~~~~~~~~~v~W~k~~~~~~~~~i~~~~~~~~~~~~~~~~~gr~~~~-----~~~sL~I~~v~ 79 (642)
T 1e07_A 5 ESTPFNVAEGKEVLLLVHNLPQHLFGYSWYKGERVDGNRQIIGYVIGTQQATPGPAYSGREIIY-----PNASLLIQNII 79 (642)
T ss_pred eccCCcccccccEEEEEccCCCCceEEEEECCcccCCcceEEEEEccccccccCccccCceeec-----cCCcEEECCCC
Confidence 35567889999999999977666678999995421 12211 1100011 2466554 35699999999
Q ss_pred CCCCEEEEEeecCC--CCeeEEEEeceec
Q psy14080 82 KRDNGTYECQAQPY--TTTSHSQNAPGLG 108 (113)
Q Consensus 82 ~~D~G~Y~C~~~~~--~~~s~~~~L~V~g 108 (113)
.+|+|.|.|.+... ...+..+.|.|..
T Consensus 80 ~~D~G~Y~C~~~~~~~~~~~~~~~l~V~~ 108 (642)
T 1e07_A 80 QNDTGFYTLHVIKSDLVNEEATGQFRVYP 108 (642)
T ss_pred cccCcEEEEEEEcCCCeEEEEEEEEEecc
Confidence 99999999999643 3335667777765
No 500
>3qs9_E FL cytokine receptor; immunoglobulin-like domain, four-helical bundle cytokine, hematopoietic cytokine-receptor complex, cell surface, EXTR complex; 7.80A {Homo sapiens}
Probab=99.05 E-value=5.7e-10 Score=86.26 Aligned_cols=85 Identities=14% Similarity=0.069 Sum_probs=59.4
Q ss_pred cceEEEecCCcEEEEEEEc-cCCCCEEEEEecCCCeEEEecc----eEEcCCCCEEEEEeCCCCcEEEEEccCCCCCCEE
Q psy14080 13 GQISTGFLAVFSYSDKTVR-DIVKVRVSWVRRRDWHILTSGV----LTYTNDARFQVIHTDGSDDWNLQIKFLQKRDNGT 87 (113)
Q Consensus 13 ~~~~tv~~G~~a~L~C~v~-~~~~~~V~W~k~~~~~~l~~~~----~~~~~~~R~~~~~~~~~~~~~L~I~~v~~~D~G~ 87 (113)
..++.+.+|+++.|.|.+. +.+.+.|.|+|.... +..+. ..+ ...|... ...+|.|.+++.+|+|.
T Consensus 234 p~~~~v~~G~~v~L~C~~~~g~p~p~i~W~k~g~~--l~~~~~~~~~~~-~~~~~~~------~~~~L~I~~v~~~DsG~ 304 (527)
T 3qs9_E 234 LPQLFLKVGEPLWIRCKAVHVNHGFGLTWELENKA--LEEGNYFEMSTY-STNRTMI------RILFAFVSSVARNDTGY 304 (527)
T ss_dssp CCEEEECTTSCEEEEEEEEESSSCCCEEEECSSSC--CCGGGEEEEEEE-ETTTEEE------EEEEEEESSCCGGGCEE
T ss_pred CCceEEeCCCeEEEEEEEccCCCCeEEEEEECCEE--CCCCceeeeeee-ccCccee------eEEEEEEccCCcccCeE
Confidence 3467889999999999997 788889999985421 11110 000 1112211 24589999999999999
Q ss_pred EEEeecCCCCeeEEEEeceec
Q psy14080 88 YECQAQPYTTTSHSQNAPGLG 108 (113)
Q Consensus 88 Y~C~~~~~~~~s~~~~L~V~g 108 (113)
|.|.+... .+..+.|.|..
T Consensus 305 Y~C~a~N~--~~~~~~L~V~~ 323 (527)
T 3qs9_E 305 YTCSSSKH--PSQSALVTIVE 323 (527)
T ss_dssp EEEEETTE--EEEEEEEEEC-
T ss_pred EEEEEEeC--CCceEEEEEEc
Confidence 99999664 67778888764
Done!