Your job contains 1 sequence.
>psy14082
MLPPSESGCQNFSKITNYLLSPPQYMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQI
QTVAKEFSSALRNICIFGGTPKGPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVE
DITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARGLDVEDVNTVNI
GSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQESSSTLSEMVL
The BLAST search returned 6 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14082
(233 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2035741 - symbol:RH20 "RNA helicase 20" specie... 218 6.2e-35 2
WB|WBGene00010260 - symbol:F58E10.3 species:6239 "Caenorh... 238 6.5e-35 2
ASPGD|ASPL0000006660 - symbol:AN5931 species:162425 "Emer... 217 1.7e-34 2
GENEDB_PFALCIPARUM|PF14_0437 - symbol:PF14_0437 "helicase... 225 2.1e-33 2
UNIPROTKB|Q8IL13 - symbol:PF14_0437 "Helicase, putative" ... 225 2.1e-33 2
UNIPROTKB|E9PT29 - symbol:Ddx17 "Protein Ddx17" species:1... 258 1.2e-28 2
TAIR|locus:2084178 - symbol:DRH1 "DEAD box RNA helicase 1... 215 7.9e-28 2
TAIR|locus:2222617 - symbol:AT5G14610 species:3702 "Arabi... 205 1.2e-26 2
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 200 2.6e-26 2
UNIPROTKB|A5A6J2 - symbol:DDX5 "Probable ATP-dependent RN... 304 2.7e-26 1
FB|FBgn0003261 - symbol:Rm62 "Rm62" species:7227 "Drosoph... 297 2.4e-25 1
UNIPROTKB|F1MBQ8 - symbol:DDX5 "Uncharacterized protein" ... 295 2.6e-25 1
UNIPROTKB|J3KTA4 - symbol:DDX5 "Probable ATP-dependent RN... 295 2.6e-25 1
UNIPROTKB|P17844 - symbol:DDX5 "Probable ATP-dependent RN... 295 2.6e-25 1
UNIPROTKB|Q5R4I9 - symbol:DDX5 "Probable ATP-dependent RN... 295 2.6e-25 1
MGI|MGI:105037 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box ... 295 2.6e-25 1
UNIPROTKB|Q4R6M5 - symbol:DDX5 "Probable ATP-dependent RN... 295 2.6e-25 1
RGD|619906 - symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box heli... 295 2.6e-25 1
UNIPROTKB|F1PEA6 - symbol:DDX5 "Uncharacterized protein" ... 295 3.3e-25 1
UNIPROTKB|F1NM08 - symbol:DDX5 "Uncharacterized protein" ... 293 3.9e-25 1
UNIPROTKB|F1NXI3 - symbol:DDX5 "Uncharacterized protein" ... 293 4.1e-25 1
ZFIN|ZDB-GENE-030131-925 - symbol:ddx5 "DEAD (Asp-Glu-Ala... 292 5.6e-25 1
UNIPROTKB|E1C2R8 - symbol:DDX17 "Uncharacterized protein"... 288 7.0e-25 1
UNIPROTKB|A7E307 - symbol:DDX17 "Uncharacterized protein"... 290 1.1e-24 1
UNIPROTKB|E2RJ60 - symbol:DDX17 "Uncharacterized protein"... 290 1.1e-24 1
MGI|MGI:1914290 - symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) bo... 290 1.1e-24 1
UNIPROTKB|C9JMU5 - symbol:DDX17 "Probable ATP-dependent R... 290 1.1e-24 1
UNIPROTKB|Q92841 - symbol:DDX17 "Probable ATP-dependent R... 290 1.4e-24 1
UNIPROTKB|H3BLZ8 - symbol:DDX17 "Probable ATP-dependent R... 290 1.4e-24 1
UNIPROTKB|F1PID8 - symbol:DDX17 "Uncharacterized protein"... 290 1.4e-24 1
UNIPROTKB|F1SKQ0 - symbol:DDX17 "Uncharacterized protein"... 290 1.4e-24 1
ZFIN|ZDB-GENE-030131-18 - symbol:si:dkey-156n14.5 "si:dke... 289 1.5e-24 1
UNIPROTKB|G3MYF0 - symbol:LOC100300937 "Uncharacterized p... 179 5.7e-24 2
FB|FBgn0035720 - symbol:CG10077 species:7227 "Drosophila ... 276 5.5e-23 1
FB|FBgn0029979 - symbol:CG10777 species:7227 "Drosophila ... 273 1.5e-22 1
UNIPROTKB|I3LHW0 - symbol:I3LHW0 "Uncharacterized protein... 171 1.9e-22 2
UNIPROTKB|F1SQ03 - symbol:LOC100524536 "Uncharacterized p... 171 2.0e-22 2
UNIPROTKB|A4RN46 - symbol:PRP5 "Pre-mRNA-processing ATP-d... 167 5.4e-22 2
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN... 193 6.3e-22 2
UNIPROTKB|Q6GWX0 - symbol:DDX4 "Probable ATP-dependent RN... 193 6.8e-22 2
UNIPROTKB|Q9NQI0 - symbol:DDX4 "Probable ATP-dependent RN... 193 6.9e-22 2
UNIPROTKB|A4QSS5 - symbol:DBP2 "ATP-dependent RNA helicas... 262 7.3e-22 1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN... 193 8.8e-22 2
UNIPROTKB|E2RMU5 - symbol:DDX4 "Uncharacterized protein" ... 193 8.9e-22 2
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 168 1.3e-21 2
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 168 1.3e-21 2
UNIPROTKB|F1RSJ7 - symbol:DDX42 "Uncharacterized protein"... 168 1.3e-21 2
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 168 1.3e-21 2
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 168 1.3e-21 2
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 167 2.3e-21 2
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 164 4.9e-21 2
UNIPROTKB|D4ADV9 - symbol:Ddx4 "Probable ATP-dependent RN... 193 6.0e-21 2
UNIPROTKB|F1MYC6 - symbol:DDX4 "Probable ATP-dependent RN... 193 6.1e-21 2
UNIPROTKB|Q5W5U4 - symbol:DDX4 "Probable ATP-dependent RN... 193 6.1e-21 2
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ... 193 6.9e-21 2
UNIPROTKB|B2C6E9 - symbol:B2C6E9 "VASA" species:9337 "Tri... 193 8.8e-21 2
RGD|1309586 - symbol:RGD1309586 "similar to probable ATP-... 183 9.7e-21 2
MGI|MGI:91842 - symbol:D1Pas1 "DNA segment, Chr 1, Pasteu... 183 9.7e-21 2
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 164 1.1e-20 2
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 164 1.1e-20 2
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 251 1.2e-20 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 220 1.3e-20 2
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 164 1.3e-20 2
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 179 1.4e-20 2
UNIPROTKB|B4DXX7 - symbol:DDX3Y "Uncharacterized protein"... 180 2.0e-20 2
UNIPROTKB|O15523 - symbol:DDX3Y "ATP-dependent RNA helica... 180 2.0e-20 2
UNIPROTKB|G5E631 - symbol:DDX3X "Uncharacterized protein"... 180 2.1e-20 2
UNIPROTKB|F1RX16 - symbol:DDX3X "Uncharacterized protein"... 180 2.1e-20 2
UNIPROTKB|J9P0V9 - symbol:DDX3X "Uncharacterized protein"... 180 2.1e-20 2
UNIPROTKB|O00571 - symbol:DDX3X "ATP-dependent RNA helica... 180 2.1e-20 2
MGI|MGI:103064 - symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/Hi... 180 2.1e-20 2
RGD|1564771 - symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box po... 180 2.1e-20 2
UNIPROTKB|I3LDV0 - symbol:DDX3Y "Uncharacterized protein"... 180 2.1e-20 2
SGD|S000005056 - symbol:DBP2 "ATP-dependent RNA helicase ... 248 2.4e-20 1
UNIPROTKB|E2RRQ7 - symbol:DDX3X "Uncharacterized protein"... 180 2.5e-20 2
RGD|2314437 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box po... 184 3.1e-20 2
MGI|MGI:1349406 - symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) bo... 184 3.2e-20 2
UNIPROTKB|B4DLW8 - symbol:DDX5 "Probable ATP-dependent RN... 246 3.8e-20 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 246 4.1e-20 1
UNIPROTKB|D3IVZ2 - symbol:DDX3Y "Uncharacterized protein"... 180 5.4e-20 2
UNIPROTKB|F1NIX2 - symbol:DDX3X "Uncharacterized protein"... 178 6.1e-20 2
UNIPROTKB|F1NIX1 - symbol:DDX3X "Uncharacterized protein"... 178 6.2e-20 2
ZFIN|ZDB-GENE-030131-1565 - symbol:ddx3 "DEAD (Asp-Glu-Al... 177 6.8e-20 2
ZFIN|ZDB-GENE-080204-77 - symbol:ddx43 "DEAD (Asp-Glu-Ala... 167 6.9e-20 2
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 181 1.1e-19 2
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz... 177 2.4e-19 2
UNIPROTKB|J3KRZ1 - symbol:DDX5 "Probable ATP-dependent RN... 231 2.5e-19 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 172 3.8e-19 2
FB|FBgn0037549 - symbol:CG7878 species:7227 "Drosophila m... 167 5.6e-19 2
ASPGD|ASPL0000055571 - symbol:AN1266 species:162425 "Emer... 159 6.0e-19 2
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 151 9.4e-19 2
WB|WBGene00008119 - symbol:C46F11.4 species:6239 "Caenorh... 153 1.1e-18 2
DICTYBASE|DDB_G0293168 - symbol:ddx17 "DEAD/DEAH box heli... 235 1.3e-18 1
UNIPROTKB|F1NL04 - symbol:DDX4 "Uncharacterized protein" ... 175 1.3e-18 2
UNIPROTKB|F1N991 - symbol:DDX4 "Uncharacterized protein" ... 175 1.6e-18 2
ZFIN|ZDB-GENE-990415-272 - symbol:vasa "vasa homolog" spe... 179 2.0e-18 2
UNIPROTKB|F1NVJ6 - symbol:DDX43 "Uncharacterized protein"... 162 2.0e-18 2
GENEDB_PFALCIPARUM|PFL1310c - symbol:PFL1310c "ATP-depend... 184 2.1e-18 2
ZFIN|ZDB-GENE-030131-667 - symbol:ddx46 "DEAD (Asp-Glu-Al... 145 3.2e-18 2
UNIPROTKB|E1BII7 - symbol:DDX43 "Uncharacterized protein"... 156 4.3e-18 2
WARNING: Descriptions of 573 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 218 (81.8 bits), Expect = 6.2e-35, Sum P(2) = 6.2e-35
Identities = 41/71 (57%), Positives = 57/71 (80%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+++VF++TKK + ITR LR + A+ IHGDK+Q +RD+VL++FR GK+PI+ ATDVAA
Sbjct: 346 RILVFLDTKKGCDQITRQLRMDGWPALSIHGDKSQAERDWVLSEFRSGKSPIMTATDVAA 405
Query: 168 RGLDVEDVNTV 178
RGLDV+DV V
Sbjct: 406 RGLDVKDVKYV 416
Score = 191 (72.3 bits), Expect = 6.2e-35, Sum P(2) = 6.2e-35
Identities = 38/63 (60%), Positives = 46/63 (73%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y+LPA VH++ Q + GDGPI LVLAPTRELA QIQ A +F SS ++ CI+GG PK
Sbjct: 153 YLLPAIVHVNAQPMLAHGDGPIVLVLAPTRELAVQIQQEASKFGSSSKIKTTCIYGGVPK 212
Query: 83 GPQ 85
GPQ
Sbjct: 213 GPQ 215
Score = 68 (29.0 bits), Expect = 4.2e-19, Sum P(2) = 4.2e-19
Identities = 13/37 (35%), Positives = 23/37 (62%)
Query: 178 VNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIREL 214
V IGS L AN I Q+++V+ + +K +L L+ ++
Sbjct: 305 VIIGSSDLKANRAIRQIVDVISESQKYNKLVKLLEDI 341
>WB|WBGene00010260 [details] [associations]
symbol:F58E10.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:Z81555 PIR:T22917
RefSeq:NP_001041134.1 ProteinModelPortal:Q9XUW5 SMR:Q9XUW5
STRING:Q9XUW5 PaxDb:Q9XUW5 PRIDE:Q9XUW5 EnsemblMetazoa:F58E10.3a.1
EnsemblMetazoa:F58E10.3a.2 EnsemblMetazoa:F58E10.3a.3
EnsemblMetazoa:F58E10.3a.4 EnsemblMetazoa:F58E10.3a.5 GeneID:179897
KEGG:cel:CELE_F58E10.3 UCSC:F58E10.3a.1 CTD:179897
WormBase:F58E10.3a InParanoid:Q9XUW5 OMA:YVLQEIT NextBio:907314
ArrayExpress:Q9XUW5 Uniprot:Q9XUW5
Length = 561
Score = 238 (88.8 bits), Expect = 6.5e-35, Sum P(2) = 6.5e-35
Identities = 42/71 (59%), Positives = 58/71 (81%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K I+FVETK+K +++TRA+RR+ +CIHGDK Q +RD+VL +F+ GK PI++ATDVAA
Sbjct: 378 KTIIFVETKRKADELTRAMRRDGWPTLCIHGDKNQGERDWVLQEFKAGKTPIMLATDVAA 437
Query: 168 RGLDVEDVNTV 178
RGLDV+D+ V
Sbjct: 438 RGLDVDDIKFV 448
Score = 172 (65.6 bits), Expect = 6.5e-35, Sum P(2) = 6.5e-35
Identities = 35/63 (55%), Positives = 45/63 (71%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
+MLPA VHI+ Q ++G+GP LVL PTRELAQQ+Q V+ +F S L+ C+FGG K
Sbjct: 183 FMLPALVHITKQAHRQRGEGPAVLVLLPTRELAQQVQEVSIDFCHSLGLKMTCLFGGASK 242
Query: 83 GPQ 85
GPQ
Sbjct: 243 GPQ 245
Score = 108 (43.1 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 19/52 (36%), Positives = 37/52 (71%)
Query: 164 DVAARGLDVE-DVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIREL 214
+V A D + D +N+GSL+L+ANHNI+QV+++++++ K+ +L L+ +
Sbjct: 320 EVRALASDFQKDAAFLNVGSLELAANHNITQVVDILEEHAKQAKLMELLNHI 371
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 217 (81.4 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 41/79 (51%), Positives = 60/79 (75%)
Query: 100 EMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPI 159
++ +N K +VF TK+ ++ITR LR++ A+ IHGDK QQ+RD+VLN+F+ GK+PI
Sbjct: 381 KIMENRGNKCLVFTGTKRIADEITRFLRQDGWPALSIHGDKQQQERDWVLNEFKTGKSPI 440
Query: 160 LVATDVAARGLDVEDVNTV 178
+VATDVA+RG+DV D+ V
Sbjct: 441 MVATDVASRGIDVRDITHV 459
Score = 190 (71.9 bits), Expect = 1.7e-34, Sum P(2) = 1.7e-34
Identities = 38/63 (60%), Positives = 45/63 (71%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y LPA VHI+ Q + GDGPI L+LAPTRELA QIQ +F SS +RN C++GG PK
Sbjct: 194 YCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPK 253
Query: 83 GPQ 85
GPQ
Sbjct: 254 GPQ 256
Score = 103 (41.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 17/37 (45%), Positives = 28/37 (75%)
Query: 178 VNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIREL 214
VNIGS+ LSANH I+Q++EV+ ++EK R+ + ++
Sbjct: 346 VNIGSMDLSANHRITQIVEVISEFEKRDRMIKHLEKI 382
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 225 (84.3 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 41/71 (57%), Positives = 59/71 (83%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
++IVFVETKK + IT+ALR + A+CIHGDK Q++R +VLN+F+ GK+PI++ATDVA+
Sbjct: 362 RIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVAS 421
Query: 168 RGLDVEDVNTV 178
RGLD+++V V
Sbjct: 422 RGLDIKNVKYV 432
Score = 170 (64.9 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 36/63 (57%), Positives = 44/63 (69%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
++LPA VHI Q +K GDGPI LVLAPTRELA+QI+ +FS S +RN C +GG PK
Sbjct: 167 FILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPK 226
Query: 83 GPQ 85
Q
Sbjct: 227 SGQ 229
Score = 74 (31.1 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 167 ARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGK 216
A+ L E VN+GSL L+A +I Q I +++++EK L SL++ + K
Sbjct: 309 AKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFK 358
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 225 (84.3 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 41/71 (57%), Positives = 59/71 (83%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
++IVFVETKK + IT+ALR + A+CIHGDK Q++R +VLN+F+ GK+PI++ATDVA+
Sbjct: 362 RIIVFVETKKNADFITKALRLDGMPALCIHGDKKQEERRWVLNEFKTGKSPIMIATDVAS 421
Query: 168 RGLDVEDVNTV 178
RGLD+++V V
Sbjct: 422 RGLDIKNVKYV 432
Score = 170 (64.9 bits), Expect = 2.1e-33, Sum P(2) = 2.1e-33
Identities = 36/63 (57%), Positives = 44/63 (69%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
++LPA VHI Q +K GDGPI LVLAPTRELA+QI+ +FS S +RN C +GG PK
Sbjct: 167 FILPAFVHILAQPNLKYGDGPIVLVLAPTRELAEQIRQECIKFSTESKIRNTCAYGGVPK 226
Query: 83 GPQ 85
Q
Sbjct: 227 SGQ 229
Score = 74 (31.1 bits), Expect = 8.8e-17, Sum P(2) = 8.8e-17
Identities = 19/50 (38%), Positives = 31/50 (62%)
Query: 167 ARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGK 216
A+ L E VN+GSL L+A +I Q I +++++EK L SL++ + K
Sbjct: 309 AKDLCKEQPIQVNVGSLTLTACRSIKQEIYLLEEHEKIGNLKSLLQRIFK 358
>UNIPROTKB|E9PT29 [details] [associations]
symbol:Ddx17 "Protein Ddx17" species:10116 "Rattus
norvegicus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 IPI:IPI00858352
PRIDE:E9PT29 Ensembl:ENSRNOT00000018185 Uniprot:E9PT29
Length = 651
Score = 258 (95.9 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 91 HRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLN 150
H+ + + MA+ K I+FVETK++ +D+TR +RR+ A+CIHGDK+Q +RD+VLN
Sbjct: 324 HKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 382
Query: 151 DFRQGKAPILVATDVAARGLDVEDVNTV 178
+FR GKAPIL+ATDVA+RGLDVEDV V
Sbjct: 383 EFRSGKAPILIATDVASRGLDVEDVKFV 410
Score = 109 (43.4 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 18/43 (41%), Positives = 31/43 (72%)
Query: 172 VEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIREL 214
+ D +N+G+L+LSANHNI Q+++V + EK+ +L L+ E+
Sbjct: 291 LRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEI 333
Score = 94 (38.1 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS---SALRNICIFGGTP 81
Y+LPA VHI+HQ +++GDGPI VL P + +F S+L +C G +
Sbjct: 146 YLLPAIVHINHQPYLERGDGPIVSVL-PFFSTLFSVYRGGTDFKFKCSSLFWVCFLGQSL 204
Query: 82 KG 83
KG
Sbjct: 205 KG 206
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 215 (80.7 bits), Expect = 7.9e-28, Sum P(2) = 7.9e-28
Identities = 42/77 (54%), Positives = 55/77 (71%)
Query: 102 AKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILV 161
++ P KVI+F TK+ + +TR L R+ A IHGDK+Q +RD VLN FR G+ P+LV
Sbjct: 399 SQEPGSKVIIFCSTKRMCDQLTRNLTRQ-FGAAAIHGDKSQPERDNVLNQFRSGRTPVLV 457
Query: 162 ATDVAARGLDVEDVNTV 178
ATDVAARGLDV+D+ V
Sbjct: 458 ATDVAARGLDVKDIRAV 474
Score = 130 (50.8 bits), Expect = 7.9e-28, Sum P(2) = 7.9e-28
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y++P +H+ + GP LVL+PTRELA QIQ A +F SS + C++GG PK
Sbjct: 212 YLIPGFLHLQRIRNDSRM-GPTILVLSPTRELATQIQEEAVKFGRSSRISCTCLYGGAPK 270
Query: 83 GPQ 85
GPQ
Sbjct: 271 GPQ 273
Score = 78 (32.5 bits), Expect = 7.1e-10, Sum P(2) = 7.1e-10
Identities = 21/46 (45%), Positives = 31/46 (67%)
Query: 178 VNIGSL-QLSANHNISQVIEVVQDYEKEKRLFSLIR--ELGKYTLI 220
VNIG++ +L AN +I+Q IEVV EK++RL ++R E G +I
Sbjct: 363 VNIGNVDELVANKSITQHIEVVAPMEKQRRLEQILRSQEPGSKVII 408
>TAIR|locus:2222617 [details] [associations]
symbol:AT5G14610 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009664
"plant-type cell wall organization" evidence=RCA] [GO:0042545 "cell
wall modification" evidence=RCA] InterPro:IPR000629
InterPro:IPR001202 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 Pfam:PF00397 PROSITE:PS00039
PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194 SMART:SM00456
SMART:SM00490 GO:GO:0005524 EMBL:CP002688 GO:GO:0003676
Gene3D:2.20.70.10 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
KO:K12823 IPI:IPI00992350 RefSeq:NP_196965.2 UniGene:At.43560
ProteinModelPortal:F4K6V1 SMR:F4K6V1 PRIDE:F4K6V1
EnsemblPlants:AT5G14610.1 GeneID:831313 KEGG:ath:AT5G14610
OMA:YLIPGFM Uniprot:F4K6V1
Length = 712
Score = 205 (77.2 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 40/77 (51%), Positives = 53/77 (68%)
Query: 102 AKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILV 161
++ P K+I+F TK+ + + R L R A IHGDK+Q +RD VLN FR G+ P+LV
Sbjct: 470 SQEPGSKIIIFCSTKRMCDQLARNLTRT-FGAAAIHGDKSQAERDDVLNQFRSGRTPVLV 528
Query: 162 ATDVAARGLDVEDVNTV 178
ATDVAARGLDV+D+ V
Sbjct: 529 ATDVAARGLDVKDIRVV 545
Score = 131 (51.2 bits), Expect = 1.2e-26, Sum P(2) = 1.2e-26
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y++P +H+ + GP LVL+PTRELA QIQ A +F SS + C++GG PK
Sbjct: 283 YLIPGFMHLQRIHNDSRM-GPTILVLSPTRELATQIQVEALKFGKSSKISCACLYGGAPK 341
Query: 83 GPQ 85
GPQ
Sbjct: 342 GPQ 344
Score = 73 (30.8 bits), Expect = 2.5e-09, Sum P(2) = 2.5e-09
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 178 VNIGSL-QLSANHNISQVIEVVQDYEKEKRLFSLIR 212
VNIG++ +L AN +I+Q IEV+ EK RL ++R
Sbjct: 434 VNIGNVDELVANKSITQTIEVLAPMEKHSRLEQILR 469
Score = 38 (18.4 bits), Expect = 6.1e-17, Sum P(2) = 6.1e-17
Identities = 10/45 (22%), Positives = 19/45 (42%)
Query: 4 PSESGCQNFSKITNYLLSPPQYMLPAAVHISHQEPVKQGDGPIAL 48
P+ C + +YL+ P + + S P++ PIA+
Sbjct: 220 PNFLRCPPAAGFNSYLVLPANGRMVYSAGFSAPSPIQAQSWPIAM 264
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 200 (75.5 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 38/71 (53%), Positives = 53/71 (74%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
KVI+F TK+ + + R++ R A+ IHGDKTQ +RD+VLN FR GK+ +L+ATDVAA
Sbjct: 682 KVIIFCSTKRLCDHLARSVGRH-FGAVVIHGDKTQGERDWVLNQFRSGKSCVLIATDVAA 740
Query: 168 RGLDVEDVNTV 178
RGLD++D+ V
Sbjct: 741 RGLDIKDIRVV 751
Score = 138 (53.6 bits), Expect = 2.6e-26, Sum P(2) = 2.6e-26
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y++PA + + H + +GP L+LAPTRELA QIQ A F SS + C++GG PK
Sbjct: 489 YLIPAFILLRHCRNDSR-NGPTVLILAPTRELATQIQDEALRFGRSSRISCTCLYGGAPK 547
Query: 83 GPQ 85
GPQ
Sbjct: 548 GPQ 550
Score = 82 (33.9 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 178 VNIGSL-QLSANHNISQVIEVVQDYEKEKRLFSLIR--ELGKYTLI 220
VNIG + +L+AN I+Q +EVV EKE+RL ++R E G +I
Sbjct: 640 VNIGRVDELAANKAITQYVEVVPQMEKERRLEQILRSQERGSKVII 685
>UNIPROTKB|A5A6J2 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9598 "Pan troglodytes" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 HOVERGEN:HBG015893 GO:GO:2001014
CTD:1655 OrthoDB:EOG4BVRTM EMBL:AB222120 RefSeq:NP_001138306.1
UniGene:Ptr.274 ProteinModelPortal:A5A6J2 PRIDE:A5A6J2
GeneID:455267 KEGG:ptr:455267 InParanoid:A5A6J2 NextBio:20836697
Uniprot:A5A6J2
Length = 614
Score = 304 (112.1 bits), Expect = 2.7e-26, P = 2.7e-26
Identities = 81/197 (41%), Positives = 119/197 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PK
Sbjct: 148 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPK 207
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
GPQ L R V NC +A P ++I F+E K T L + + G + Q
Sbjct: 208 GPQ-IRDLERGVENC---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQ 261
Query: 143 QDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V D ++D +NIG+L+LSANHNI Q+++V
Sbjct: 262 IRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDV 319
Query: 198 VQDYEKEKRLFSLIREL 214
D EK+++L L+ E+
Sbjct: 320 CHDVEKDEKLIRLMEEI 336
Score = 245 (91.3 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 46/71 (64%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +++TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 403 RGLDVEDVKFV 413
>FB|FBgn0003261 [details] [associations]
symbol:Rm62 "Rm62" species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS;NAS]
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0016246 "RNA interference" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0019730 "antimicrobial humoral response"
evidence=IMP] [GO:0005703 "polytene chromosome puff" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE014297 GO:GO:0005524 GO:GO:0005875
GO:GO:0006417 GO:GO:0016246 GO:GO:0022008 GO:GO:0003729
GO:GO:0019730 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0005703 GO:GO:0000381 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 GeneTree:ENSGT00660000095174 EMBL:X52846
EMBL:BT001716 EMBL:BT011476 EMBL:BT015209 PIR:S11485
RefSeq:NP_001163528.1 RefSeq:NP_001189182.1 RefSeq:NP_524243.2
RefSeq:NP_731031.1 RefSeq:NP_731032.1 RefSeq:NP_731033.1
RefSeq:NP_731034.1 RefSeq:NP_731035.2 UniGene:Dm.1520
ProteinModelPortal:P19109 SMR:P19109 DIP:DIP-17867N IntAct:P19109
MINT:MINT-301207 STRING:P19109 PaxDb:P19109 PRIDE:P19109
EnsemblMetazoa:FBtr0078652 GeneID:40739 KEGG:dme:Dmel_CG10279
CTD:40739 FlyBase:FBgn0003261 InParanoid:P19109 OMA:HISNQPR
OrthoDB:EOG4QBZMP PhylomeDB:P19109 GenomeRNAi:40739 NextBio:820339
Bgee:P19109 GermOnline:CG10279 Uniprot:P19109
Length = 719
Score = 297 (109.6 bits), Expect = 2.4e-25, P = 2.4e-25
Identities = 80/198 (40%), Positives = 122/198 (61%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y+LPA VHI++Q+P+++GDGPIALVLAPTRELAQQIQ VA EF SS +RN C+FGG PK
Sbjct: 335 YILPAIVHINNQQPLQRGDGPIALVLAPTRELAQQIQQVATEFGSSSYVRNTCVFGGAPK 394
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
G Q L R C+ +A P ++I F+ ++ T + E + + G +
Sbjct: 395 GGQ-MRDLQR---GCEIVIA-TPG-RLIDFLSAGSTNLKRCTYLVLDEADRMLDM-GFEP 447
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + + +NIGSL+LSANHNI QV++
Sbjct: 448 QIRK--IVSQIRPDRQTLMWSATWPKEVKQLAEDFLGNYIQINIGSLELSANHNIRQVVD 505
Query: 197 VVQDYEKEKRLFSLIREL 214
V ++ KE++L +L+ ++
Sbjct: 506 VCDEFSKEEKLKTLLSDI 523
Score = 210 (79.0 bits), Expect = 5.4e-16, P = 5.4e-16
Identities = 41/80 (51%), Positives = 60/80 (75%)
Query: 99 YEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAP 158
Y+ +++P K+I+FVETK++V+++ R +R IHGDK+Q +RD+VL +FR GK+
Sbjct: 524 YDTSESPG-KIIIFVETKRRVDNLVRFIRSFGVRCGAIHGDKSQSERDFVLREFRSGKSN 582
Query: 159 ILVATDVAARGLDVEDVNTV 178
ILVATDVAARGLDV+ + V
Sbjct: 583 ILVATDVAARGLDVDGIKYV 602
>UNIPROTKB|F1MBQ8 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072332 "intrinsic apoptotic signaling pathway by p53
class mediator" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0060765 "regulation of androgen
receptor signaling pathway" evidence=IEA] [GO:0050681 "androgen
receptor binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IEA] [GO:0036002
"pre-mRNA binding" evidence=IEA] [GO:0033148 "positive regulation
of intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0030331 "estrogen receptor binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003713 "transcription coactivator activity"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0000122 GO:GO:0003713 GO:GO:0033148 GO:GO:0043517
GO:GO:0060765 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
KO:K12823 OMA:IDAMSGY GeneTree:ENSGT00660000095174 CTD:1655
EMBL:DAAA02049347 IPI:IPI01002739 RefSeq:NP_001178324.1
UniGene:Bt.64934 ProteinModelPortal:F1MBQ8 SMR:F1MBQ8 PRIDE:F1MBQ8
Ensembl:ENSBTAT00000024514 GeneID:533700 KEGG:bta:533700
NextBio:20876124 ArrayExpress:F1MBQ8 Uniprot:F1MBQ8
Length = 614
Score = 295 (108.9 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 80/197 (40%), Positives = 118/197 (59%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PK
Sbjct: 148 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPK 207
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
GPQ L R V C +A P ++I F+E K T L + + G + Q
Sbjct: 208 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQ 261
Query: 143 QDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V D ++D +NIG+L+LSANHNI Q+++V
Sbjct: 262 IRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDV 319
Query: 198 VQDYEKEKRLFSLIREL 214
D EK+++L L+ E+
Sbjct: 320 CHDVEKDEKLIRLMEEI 336
Score = 245 (91.3 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 46/71 (64%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +++TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 403 RGLDVEDVKFV 413
>UNIPROTKB|J3KTA4 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:2746 ChiTaRS:DDX5 ProteinModelPortal:J3KTA4
Ensembl:ENST00000578804 Uniprot:J3KTA4
Length = 614
Score = 295 (108.9 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 80/197 (40%), Positives = 118/197 (59%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PK
Sbjct: 148 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPK 207
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
GPQ L R V C +A P ++I F+E K T L + + G + Q
Sbjct: 208 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQ 261
Query: 143 QDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V D ++D +NIG+L+LSANHNI Q+++V
Sbjct: 262 IRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDV 319
Query: 198 VQDYEKEKRLFSLIREL 214
D EK+++L L+ E+
Sbjct: 320 CHDVEKDEKLIRLMEEI 336
Score = 245 (91.3 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 46/71 (64%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +++TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 403 RGLDVEDVKFV 413
>UNIPROTKB|P17844 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0001701 "in utero embryonic development" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IEA] [GO:0007623
"circadian rhythm" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0045069 "regulation of viral genome replication"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IMP;NAS]
[GO:0016049 "cell growth" evidence=NAS] [GO:0005634 "nucleus"
evidence=IDA;NAS] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0005515 "protein binding" evidence=IPI]
[GO:0043517 "positive regulation of DNA damage response, signal
transduction by p53 class mediator" evidence=IMP] [GO:0072332
"intrinsic apoptotic signaling pathway by p53 class mediator"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IDA] [GO:2001014
"regulation of skeletal muscle cell differentiation" evidence=ISS]
[GO:0045667 "regulation of osteoblast differentiation"
evidence=ISS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0050681
"androgen receptor binding" evidence=IDA] [GO:0060765 "regulation
of androgen receptor signaling pathway" evidence=IMP] [GO:0033148
"positive regulation of intracellular estrogen receptor signaling
pathway" evidence=IDA] [GO:0003713 "transcription coactivator
activity" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0030331 "estrogen receptor binding" evidence=IDA] [GO:0036002
"pre-mRNA binding" evidence=IDA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IDA]
[GO:0030529 "ribonucleoprotein complex" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0016049 GO:GO:0001701 GO:GO:0045944
GO:GO:0006351 GO:GO:0000122 GO:GO:0003713 EMBL:CH471109
GO:GO:0033148 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0045069 GO:GO:0004004 GO:GO:0000381 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY HOVERGEN:HBG015893
GO:GO:2001014 EMBL:X52104 EMBL:AF015812 EMBL:BT006943 EMBL:AB451257
EMBL:BC016027 EMBL:X15729 EMBL:AJ010931 IPI:IPI00017617 PIR:JC1087
RefSeq:NP_004387.1 UniGene:Hs.279806 PDB:3FE2 PDB:4A4D PDBsum:3FE2
PDBsum:4A4D ProteinModelPortal:P17844 SMR:P17844 DIP:DIP-29844N
IntAct:P17844 MINT:MINT-5000516 STRING:P17844 PhosphoSite:P17844
DMDM:129383 SWISS-2DPAGE:P17844 PaxDb:P17844 PeptideAtlas:P17844
PRIDE:P17844 DNASU:1655 Ensembl:ENST00000225792
Ensembl:ENST00000574715 GeneID:1655 KEGG:hsa:1655 UCSC:uc002jej.2
CTD:1655 GeneCards:GC17M062494 HGNC:HGNC:2746 HPA:CAB005868
HPA:HPA020043 MIM:180630 neXtProt:NX_P17844 PharmGKB:PA27228
InParanoid:P17844 OrthoDB:EOG4BVRTM PhylomeDB:P17844 ChiTaRS:DDX5
EvolutionaryTrace:P17844 GenomeRNAi:1655 NextBio:6816
ArrayExpress:P17844 Bgee:P17844 CleanEx:HS_DDX5
Genevestigator:P17844 GermOnline:ENSG00000108654 Uniprot:P17844
Length = 614
Score = 295 (108.9 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 80/197 (40%), Positives = 118/197 (59%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PK
Sbjct: 148 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPK 207
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
GPQ L R V C +A P ++I F+E K T L + + G + Q
Sbjct: 208 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQ 261
Query: 143 QDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V D ++D +NIG+L+LSANHNI Q+++V
Sbjct: 262 IRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDV 319
Query: 198 VQDYEKEKRLFSLIREL 214
D EK+++L L+ E+
Sbjct: 320 CHDVEKDEKLIRLMEEI 336
Score = 245 (91.3 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 46/71 (64%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +++TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 403 RGLDVEDVKFV 413
>UNIPROTKB|Q5R4I9 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9601 "Pongo abelii" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 KO:K12823 HOVERGEN:HBG015893
GO:GO:2001014 HSSP:P10081 CTD:1655 EMBL:CR861259
RefSeq:NP_001126958.1 UniGene:Pab.18500 ProteinModelPortal:Q5R4I9
PRIDE:Q5R4I9 GeneID:100173977 KEGG:pon:100173977 InParanoid:Q5R4I9
Uniprot:Q5R4I9
Length = 614
Score = 295 (108.9 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 80/197 (40%), Positives = 118/197 (59%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PK
Sbjct: 148 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPK 207
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
GPQ L R V C +A P ++I F+E K T L + + G + Q
Sbjct: 208 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQ 261
Query: 143 QDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V D ++D +NIG+L+LSANHNI Q+++V
Sbjct: 262 IRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDV 319
Query: 198 VQDYEKEKRLFSLIREL 214
D EK+++L L+ E+
Sbjct: 320 CHDVEKDEKLIRLMEEI 336
Score = 245 (91.3 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 46/71 (64%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +++TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 403 RGLDVEDVKFV 413
>MGI|MGI:105037 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 5"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=ISO] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=ISO] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IC]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0007623 "circadian rhythm" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=ISO] [GO:0030331 "estrogen
receptor binding" evidence=ISO] [GO:0030529 "ribonucleoprotein
complex" evidence=ISO] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=ISO]
[GO:0036002 "pre-mRNA binding" evidence=ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISO] [GO:0045069 "regulation of viral genome
replication" evidence=ISO] [GO:0045667 "regulation of osteoblast
differentiation" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0060765 "regulation of androgen receptor signaling pathway"
evidence=ISO] [GO:0071013 "catalytic step 2 spliceosome"
evidence=ISO] [GO:0072332 "intrinsic apoptotic signaling pathway by
p53 class mediator" evidence=ISO] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:105037
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0007623
GO:GO:0001701 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0030529 GO:GO:0050681 GO:GO:0043517 GO:GO:0030331
GO:GO:0060765 GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381
EMBL:AL603664 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014 OrthoDB:EOG4BVRTM
ChiTaRS:DDX5 EMBL:X65627 IPI:IPI00420363 PIR:I48385
UniGene:Mm.220038 ProteinModelPortal:Q61656 SMR:Q61656
DIP:DIP-32293N IntAct:Q61656 STRING:Q61656 PhosphoSite:Q61656
PaxDb:Q61656 PRIDE:Q61656 InParanoid:Q61656 CleanEx:MM_DDX5
Genevestigator:Q61656 GermOnline:ENSMUSG00000020719 Uniprot:Q61656
Length = 614
Score = 295 (108.9 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 80/197 (40%), Positives = 118/197 (59%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PK
Sbjct: 148 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPK 207
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
GPQ L R V C +A P ++I F+E K T L + + G + Q
Sbjct: 208 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQ 261
Query: 143 QDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V D ++D +NIG+L+LSANHNI Q+++V
Sbjct: 262 IRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDV 319
Query: 198 VQDYEKEKRLFSLIREL 214
D EK+++L L+ E+
Sbjct: 320 CHDVEKDEKLIRLMEEI 336
Score = 245 (91.3 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 46/71 (64%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +++TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 403 RGLDVEDVKFV 413
>UNIPROTKB|Q4R6M5 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9541 "Macaca fascicularis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=ISS] [GO:0003713 "transcription coactivator
activity" evidence=ISS] [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0005730 "nucleolus" evidence=ISS] [GO:0030331
"estrogen receptor binding" evidence=ISS] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=ISS] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISS] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0050681 "androgen receptor binding" evidence=ISS] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=ISS]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=ISS] [GO:2001014 "regulation of skeletal muscle
cell differentiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012587
Pfam:PF00270 Pfam:PF00271 Pfam:PF08061 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0006397 GO:GO:0045944 GO:GO:0006351
GO:GO:0005681 GO:GO:0003723 GO:GO:0000122 GO:GO:0003713
GO:GO:0050681 GO:GO:0043517 GO:GO:0030331 GO:GO:0060765
GO:GO:0045667 GO:GO:0072332 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:2001014
HSSP:P10081 EMBL:AB169157 ProteinModelPortal:Q4R6M5 PRIDE:Q4R6M5
Uniprot:Q4R6M5
Length = 614
Score = 295 (108.9 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 80/197 (40%), Positives = 118/197 (59%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PK
Sbjct: 148 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPK 207
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
GPQ L R V C +A P ++I F+E K T L + + G + Q
Sbjct: 208 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQ 261
Query: 143 QDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V D ++D +NIG+L+LSANHNI Q+++V
Sbjct: 262 IRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDV 319
Query: 198 VQDYEKEKRLFSLIREL 214
D EK+++L L+ E+
Sbjct: 320 CHDVEKDEKLIRLMEEI 336
Score = 238 (88.8 bits), Expect = 3.9e-19, P = 3.9e-19
Identities = 45/71 (63%), Positives = 60/71 (84%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +++TR +RR+ A+ IHGDK+QQ+R +VLN+F+ GKAPIL+ATDVA+
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERGWVLNEFKHGKAPILIATDVAS 402
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 403 RGLDVEDVKFV 413
>RGD|619906 [details] [associations]
symbol:Ddx5 "DEAD (Asp-Glu-Ala-Asp) box helicase 5" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0000381 "regulation of alternative mRNA splicing, via
spliceosome" evidence=IEA;ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003712 "transcription cofactor
activity" evidence=ISO] [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0003724 "RNA helicase activity"
evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005516 "calmodulin binding" evidence=IDA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005730 "nucleolus" evidence=IEA;ISO] [GO:0007623 "circadian
rhythm" evidence=IEA;ISO] [GO:0019899 "enzyme binding"
evidence=IDA] [GO:0030331 "estrogen receptor binding"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=IEA;ISO] [GO:0036002
"pre-mRNA binding" evidence=IEA;ISO] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA;ISO] [GO:0045069 "regulation of viral genome
replication" evidence=IMP] [GO:0045667 "regulation of osteoblast
differentiation" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] [GO:0048306 "calcium-dependent protein binding"
evidence=IDA] [GO:0050681 "androgen receptor binding"
evidence=IEA;ISO] [GO:0060765 "regulation of androgen receptor
signaling pathway" evidence=IEA;ISO] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA;ISO] [GO:0072332 "intrinsic apoptotic
signaling pathway by p53 class mediator" evidence=IEA;ISO]
[GO:2001014 "regulation of skeletal muscle cell differentiation"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:619906 GO:GO:0005524 GO:GO:0005730 GO:GO:0001701 GO:GO:0045944
GO:GO:0019899 GO:GO:0000122 GO:GO:0003713 GO:GO:0005516
GO:GO:0048306 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
EMBL:CH473948 GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0045069 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 CTD:1655
EMBL:BC079036 IPI:IPI00464718 RefSeq:NP_001007614.1
UniGene:Rn.162208 IntAct:Q6AYI1 STRING:Q6AYI1
Ensembl:ENSRNOT00000048490 GeneID:287765 KEGG:rno:287765
UCSC:RGD:619906 InParanoid:Q6AYI1 NextBio:626970
Genevestigator:Q6AYI1 Uniprot:Q6AYI1
Length = 615
Score = 295 (108.9 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 80/197 (40%), Positives = 118/197 (59%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PK
Sbjct: 148 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPK 207
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
GPQ L R V C +A P ++I F+E K T L + + G + Q
Sbjct: 208 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQ 261
Query: 143 QDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V D ++D +NIG+L+LSANHNI Q+++V
Sbjct: 262 IRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDV 319
Query: 198 VQDYEKEKRLFSLIREL 214
D EK+++L L+ E+
Sbjct: 320 CHDVEKDEKLIRLMEEI 336
Score = 245 (91.3 bits), Expect = 6.8e-20, P = 6.8e-20
Identities = 46/71 (64%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +++TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 343 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 402
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 403 RGLDVEDVKFV 413
>UNIPROTKB|F1PEA6 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003724 "RNA helicase
activity" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AAEX03006361
Ensembl:ENSCAFT00000018595 Uniprot:F1PEA6
Length = 671
Score = 295 (108.9 bits), Expect = 3.3e-25, P = 3.3e-25
Identities = 80/197 (40%), Positives = 118/197 (59%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PK
Sbjct: 205 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPK 264
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
GPQ L R V C +A P ++I F+E K T L + + G + Q
Sbjct: 265 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQ 318
Query: 143 QDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V D ++D +NIG+L+LSANHNI Q+++V
Sbjct: 319 IRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDV 376
Query: 198 VQDYEKEKRLFSLIREL 214
D EK+++L L+ E+
Sbjct: 377 CHDVEKDEKLIRLMEEI 393
Score = 245 (91.3 bits), Expect = 8.2e-20, P = 8.2e-20
Identities = 46/71 (64%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +++TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 400 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 459
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 460 RGLDVEDVKFV 470
>UNIPROTKB|F1NM08 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003712 "transcription cofactor activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271 Pfam:PF08061
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0003676 GO:GO:0003712 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:AADN02030017 IPI:IPI00680367 Ensembl:ENSGALT00000005586
ArrayExpress:F1NM08 Uniprot:F1NM08
Length = 595
Score = 293 (108.2 bits), Expect = 3.9e-25, P = 3.9e-25
Identities = 80/198 (40%), Positives = 120/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+S A L++ CI+GG PK
Sbjct: 136 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPK 195
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E K + T + E + + G +
Sbjct: 196 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLEAGKTNLRRCTYLVLDEADRMLDM-GFEP 248
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D +++ +NIG+L+LSANHNI Q+++
Sbjct: 249 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVD 306
Query: 197 VVQDYEKEKRLFSLIREL 214
V D EK+ +L L+ E+
Sbjct: 307 VCHDVEKDDKLIRLMEEI 324
Score = 249 (92.7 bits), Expect = 2.3e-20, P = 2.3e-20
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +D+TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 331 KTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 390
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 391 RGLDVEDVKFV 401
>UNIPROTKB|F1NXI3 [details] [associations]
symbol:DDX5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000381 "regulation of alternative mRNA splicing,
via spliceosome" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0007623 "circadian rhythm" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] [GO:0033148 "positive regulation of
intracellular estrogen receptor signaling pathway" evidence=IEA]
[GO:0036002 "pre-mRNA binding" evidence=IEA] [GO:0043517 "positive
regulation of DNA damage response, signal transduction by p53 class
mediator" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050681 "androgen receptor binding" evidence=IEA] [GO:0060765
"regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0072332 "intrinsic apoptotic signaling pathway by p53 class
mediator" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0045944 GO:GO:0000122
GO:GO:0003713 GO:GO:0033148 GO:GO:0043517 GO:GO:0060765
GO:GO:0072332 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000381 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0036002 OMA:IDAMSGY
GeneTree:ENSGT00660000095174 EMBL:AADN02030017 IPI:IPI00598253
ProteinModelPortal:F1NXI3 Ensembl:ENSGALT00000034644
ArrayExpress:F1NXI3 Uniprot:F1NXI3
Length = 603
Score = 293 (108.2 bits), Expect = 4.1e-25, P = 4.1e-25
Identities = 80/198 (40%), Positives = 120/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+S A L++ CI+GG PK
Sbjct: 144 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYSRACRLKSTCIYGGAPK 203
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E K + T + E + + G +
Sbjct: 204 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLEAGKTNLRRCTYLVLDEADRMLDM-GFEP 256
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D +++ +NIG+L+LSANHNI Q+++
Sbjct: 257 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYVHINIGALELSANHNILQIVD 314
Query: 197 VVQDYEKEKRLFSLIREL 214
V D EK+ +L L+ E+
Sbjct: 315 VCHDVEKDDKLIRLMEEI 332
Score = 249 (92.7 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 47/71 (66%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +D+TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 339 KTIVFVETKRRCDDLTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 398
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 399 RGLDVEDVKFV 409
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 292 (107.8 bits), Expect = 5.6e-25, P = 5.6e-25
Identities = 79/198 (39%), Positives = 118/198 (59%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ ++ GDGPI LVLAPTRELAQQ+Q VA E+ A +++ CI+GG PK
Sbjct: 150 YLLPAIVHINHQPFLEHGDGPICLVLAPTRELAQQVQQVAAEYGKASRIKSTCIYGGAPK 209
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E K + T + E + + G +
Sbjct: 210 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLEAGKTNLRRCTYLVLDEADRMLDM-GFEP 262
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D +++ +N+G+LQLSANHNI Q+++
Sbjct: 263 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLKEYIQINVGALQLSANHNILQIVD 320
Query: 197 VVQDYEKEKRLFSLIREL 214
V D EKE +L L+ E+
Sbjct: 321 VCNDGEKEDKLIRLLEEI 338
Score = 246 (91.7 bits), Expect = 5.4e-20, P = 5.4e-20
Identities = 46/71 (64%), Positives = 60/71 (84%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K I+FVETK++ +D+TR +RR+ A+ IHGDK QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 345 KTIIFVETKRRCDDLTRRMRRDGWPAMGIHGDKNQQERDWVLNEFKYGKAPILIATDVAS 404
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 405 RGLDVEDVKFV 415
>UNIPROTKB|E1C2R8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009791 "post-embryonic
development" evidence=IEA] [GO:0072358 "cardiovascular system
development" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
OMA:QQFPQPP EMBL:AADN02006148 EMBL:AADN02006147 IPI:IPI00594176
Ensembl:ENSGALT00000020002 Uniprot:E1C2R8
Length = 496
Score = 288 (106.4 bits), Expect = 7.0e-25, P = 7.0e-25
Identities = 77/198 (38%), Positives = 119/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA ++ S L++ CI+GG PK
Sbjct: 144 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 203
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E K + T + E + + G +
Sbjct: 204 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLEAGKTNLRRCTYLVLDEADRMLDM-GFEP 256
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D ++D +N+G+L+LSANHNI Q+++
Sbjct: 257 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINVGNLELSANHNILQIVD 314
Query: 197 VVQDYEKEKRLFSLIREL 214
V + EK+ +L L+ E+
Sbjct: 315 VCMESEKDHKLIQLMEEI 332
Score = 258 (95.9 bits), Expect = 1.5e-21, P = 1.5e-21
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 91 HRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLN 150
H+ + + MA+ K I+FVETK++ +D+TR +RR+ A+CIHGDK+Q +RD+VLN
Sbjct: 323 HKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 381
Query: 151 DFRQGKAPILVATDVAARGLDVEDVNTV 178
+FR GKAPIL+ATDVA+RGLDVEDV V
Sbjct: 382 EFRSGKAPILIATDVASRGLDVEDVKFV 409
>UNIPROTKB|A7E307 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
CTD:10521 HOVERGEN:HBG015893 KO:K13178 OrthoDB:EOG4QRH3N
GO:GO:0072358 EMBL:DAAA02014661 EMBL:DAAA02014662 EMBL:BC151648
IPI:IPI00914517 RefSeq:NP_001095463.1 UniGene:Bt.91623
Ensembl:ENSBTAT00000037682 GeneID:514323 KEGG:bta:514323
InParanoid:A7E307 OMA:QQFPQPP NextBio:20871275 Uniprot:A7E307
Length = 650
Score = 290 (107.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 77/198 (38%), Positives = 119/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA ++ S L++ CI+GG PK
Sbjct: 146 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 205
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E+ K + T + E + + G +
Sbjct: 206 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLESGKTNLRRCTYLVLDEADRMLDM-GFEP 258
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + D +N+G+L+LSANHNI Q+++
Sbjct: 259 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 316
Query: 197 VVQDYEKEKRLFSLIREL 214
V + EK+ +L L+ E+
Sbjct: 317 VCMESEKDHKLIQLMEEI 334
Score = 258 (95.9 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 91 HRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLN 150
H+ + + MA+ K I+FVETK++ +D+TR +RR+ A+CIHGDK+Q +RD+VLN
Sbjct: 325 HKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 383
Query: 151 DFRQGKAPILVATDVAARGLDVEDVNTV 178
+FR GKAPIL+ATDVA+RGLDVEDV V
Sbjct: 384 EFRSGKAPILIATDVASRGLDVEDVKFV 411
>UNIPROTKB|E2RJ60 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AAEX03007314
Ensembl:ENSCAFT00000037931 Uniprot:E2RJ60
Length = 650
Score = 290 (107.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 77/198 (38%), Positives = 119/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA ++ S L++ CI+GG PK
Sbjct: 146 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 205
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E+ K + T + E + + G +
Sbjct: 206 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLESGKTNLRRCTYLVLDEADRMLDM-GFEP 258
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + D +N+G+L+LSANHNI Q+++
Sbjct: 259 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 316
Query: 197 VVQDYEKEKRLFSLIREL 214
V + EK+ +L L+ E+
Sbjct: 317 VCMESEKDHKLIQLMEEI 334
Score = 258 (95.9 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 91 HRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLN 150
H+ + + MA+ K I+FVETK++ +D+TR +RR+ A+CIHGDK+Q +RD+VLN
Sbjct: 325 HKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 383
Query: 151 DFRQGKAPILVATDVAARGLDVEDVNTV 178
+FR GKAPIL+ATDVA+RGLDVEDV V
Sbjct: 384 EFRSGKAPILIATDVASRGLDVEDVKFV 411
>MGI|MGI:1914290 [details] [associations]
symbol:Ddx17 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 17"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0030331 "estrogen receptor binding"
evidence=ISO] [GO:0033148 "positive regulation of intracellular
estrogen receptor signaling pathway" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0072358 "cardiovascular system
development" evidence=IMP] [GO:2001014 "regulation of skeletal
muscle cell differentiation" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1914290
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0045944
GO:GO:0006351 GO:GO:0003723 GO:GO:0003713 GO:GO:0009791
GO:GO:0033148 GO:GO:0030331 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:10521 HOVERGEN:HBG015893 KO:K13178
ChiTaRS:DDX17 GO:GO:2001014 EMBL:AK039888 EMBL:BC062910
EMBL:BC096036 IPI:IPI00396797 IPI:IPI00405364 RefSeq:NP_001035277.1
RefSeq:NP_951061.1 RefSeq:NP_951062.1 UniGene:Mm.29644
UniGene:Mm.298199 ProteinModelPortal:Q501J6 SMR:Q501J6
IntAct:Q501J6 STRING:Q501J6 PhosphoSite:Q501J6
REPRODUCTION-2DPAGE:IPI00405364 PaxDb:Q501J6 PRIDE:Q501J6
GeneID:67040 KEGG:mmu:67040 UCSC:uc007wtq.1 UCSC:uc007wtt.1
InParanoid:Q501J6 OrthoDB:EOG4QRH3N NextBio:323386 Bgee:Q501J6
CleanEx:MM_DDX17 Genevestigator:Q501J6
GermOnline:ENSMUSG00000055065 GO:GO:0072358 Uniprot:Q501J6
Length = 650
Score = 290 (107.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 77/198 (38%), Positives = 119/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA ++ S L++ CI+GG PK
Sbjct: 146 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 205
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E+ K + T + E + + G +
Sbjct: 206 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLESGKTNLRRCTYLVLDEADRMLDM-GFEP 258
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + D +N+G+L+LSANHNI Q+++
Sbjct: 259 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 316
Query: 197 VVQDYEKEKRLFSLIREL 214
V + EK+ +L L+ E+
Sbjct: 317 VCMESEKDHKLIQLMEEI 334
Score = 258 (95.9 bits), Expect = 3.0e-21, P = 3.0e-21
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 91 HRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLN 150
H+ + + MA+ K I+FVETK++ +D+TR +RR+ A+CIHGDK+Q +RD+VLN
Sbjct: 325 HKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 383
Query: 151 DFRQGKAPILVATDVAARGLDVEDVNTV 178
+FR GKAPIL+ATDVA+RGLDVEDV V
Sbjct: 384 EFRSGKAPILIATDVASRGLDVEDVKFV 411
>UNIPROTKB|C9JMU5 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 EMBL:Z97056 IPI:IPI01022339
HGNC:HGNC:2740 ChiTaRS:DDX17 ProteinModelPortal:C9JMU5 SMR:C9JMU5
STRING:C9JMU5 PRIDE:C9JMU5 Ensembl:ENST00000381633
ArrayExpress:C9JMU5 Bgee:C9JMU5 Uniprot:C9JMU5
Length = 652
Score = 290 (107.1 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 77/198 (38%), Positives = 119/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA ++ S L++ CI+GG PK
Sbjct: 146 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 205
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E+ K + T + E + + G +
Sbjct: 206 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLESGKTNLRRCTYLVLDEADRMLDM-GFEP 258
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + D +N+G+L+LSANHNI Q+++
Sbjct: 259 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 316
Query: 197 VVQDYEKEKRLFSLIREL 214
V + EK+ +L L+ E+
Sbjct: 317 VCMESEKDHKLIQLMEEI 334
Score = 247 (92.0 bits), Expect = 4.7e-20, P = 4.7e-20
Identities = 50/90 (55%), Positives = 68/90 (75%)
Query: 91 HRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLN 150
H+ + + MA+ K I+FVETK++ +D+TR +RR+ A+CIHGDK+Q +RD+VLN
Sbjct: 325 HKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 383
Query: 151 DFRQGKAPILVATDVAARGL--DVEDVNTV 178
+FR GKAPIL+ATDVA+RGL DVEDV V
Sbjct: 384 EFRSGKAPILIATDVASRGLGFDVEDVKFV 413
>UNIPROTKB|Q92841 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0033148 "positive
regulation of intracellular estrogen receptor signaling pathway"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:2001014 "regulation of
skeletal muscle cell differentiation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0003724 "RNA helicase activity"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0008186 "RNA-dependent ATPase activity" evidence=TAS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005730
EMBL:CH471095 GO:GO:0045944 GO:GO:0006351 GO:GO:0003723
GO:GO:0006396 GO:GO:0003713 GO:GO:0033148 GO:GO:0030331
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 GO:GO:0008186 EMBL:U59321 EMBL:CR456432
EMBL:AL713763 EMBL:Z97056 EMBL:BC000595 IPI:IPI00651653
IPI:IPI00651677 IPI:IPI00889541 IPI:IPI01022339 PIR:S72367
RefSeq:NP_006377.2 UniGene:Hs.706116 UniGene:Hs.725500
ProteinModelPortal:Q92841 SMR:Q92841 DIP:DIP-29843N IntAct:Q92841
MINT:MINT-4545892 STRING:Q92841 PhosphoSite:Q92841 DMDM:3122595
REPRODUCTION-2DPAGE:IPI00023785 PaxDb:Q92841 PRIDE:Q92841
DNASU:10521 Ensembl:ENST00000403230 GeneID:10521 KEGG:hsa:10521
UCSC:uc003avx.4 CTD:10521 GeneCards:GC22M038879 HGNC:HGNC:2740
HPA:CAB024908 MIM:608469 neXtProt:NX_Q92841 PharmGKB:PA27206
HOVERGEN:HBG015893 InParanoid:Q92841 KO:K13178 ChiTaRS:DDX17
GenomeRNAi:10521 NextBio:39902 ArrayExpress:Q92841 Bgee:Q92841
CleanEx:HS_DDX17 Genevestigator:Q92841 GermOnline:ENSG00000100201
GO:GO:2001014 Uniprot:Q92841
Length = 729
Score = 290 (107.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 77/198 (38%), Positives = 119/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA ++ S L++ CI+GG PK
Sbjct: 225 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 284
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E+ K + T + E + + G +
Sbjct: 285 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLESGKTNLRRCTYLVLDEADRMLDM-GFEP 337
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + D +N+G+L+LSANHNI Q+++
Sbjct: 338 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 395
Query: 197 VVQDYEKEKRLFSLIREL 214
V + EK+ +L L+ E+
Sbjct: 396 VCMESEKDHKLIQLMEEI 413
Score = 258 (95.9 bits), Expect = 3.8e-21, P = 3.8e-21
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 91 HRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLN 150
H+ + + MA+ K I+FVETK++ +D+TR +RR+ A+CIHGDK+Q +RD+VLN
Sbjct: 404 HKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 462
Query: 151 DFRQGKAPILVATDVAARGLDVEDVNTV 178
+FR GKAPIL+ATDVA+RGLDVEDV V
Sbjct: 463 EFRSGKAPILIATDVASRGLDVEDVKFV 490
>UNIPROTKB|H3BLZ8 [details] [associations]
symbol:DDX17 "Probable ATP-dependent RNA helicase DDX17"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0009791
"post-embryonic development" evidence=IEA] [GO:0072358
"cardiovascular system development" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 GO:GO:0009791
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:Z97056 HGNC:HGNC:2740
ChiTaRS:DDX17 GO:GO:0072358 ProteinModelPortal:H3BLZ8 SMR:H3BLZ8
Ensembl:ENST00000396821 Bgee:H3BLZ8 Uniprot:H3BLZ8
Length = 731
Score = 290 (107.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 77/198 (38%), Positives = 119/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA ++ S L++ CI+GG PK
Sbjct: 225 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 284
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E+ K + T + E + + G +
Sbjct: 285 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLESGKTNLRRCTYLVLDEADRMLDM-GFEP 337
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + D +N+G+L+LSANHNI Q+++
Sbjct: 338 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 395
Query: 197 VVQDYEKEKRLFSLIREL 214
V + EK+ +L L+ E+
Sbjct: 396 VCMESEKDHKLIQLMEEI 413
Score = 258 (95.9 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 91 HRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLN 150
H+ + + MA+ K I+FVETK++ +D+TR +RR+ A+CIHGDK+Q +RD+VLN
Sbjct: 404 HKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 462
Query: 151 DFRQGKAPILVATDVAARGLDVEDVNTV 178
+FR GKAPIL+ATDVA+RGLDVEDV V
Sbjct: 463 EFRSGKAPILIATDVASRGLDVEDVKFV 490
>UNIPROTKB|F1PID8 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:QQFPQPP EMBL:AAEX03007314
Ensembl:ENSCAFT00000002162 Uniprot:F1PID8
Length = 736
Score = 290 (107.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 77/198 (38%), Positives = 119/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA ++ S L++ CI+GG PK
Sbjct: 227 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 286
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E+ K + T + E + + G +
Sbjct: 287 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLESGKTNLRRCTYLVLDEADRMLDM-GFEP 339
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + D +N+G+L+LSANHNI Q+++
Sbjct: 340 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 397
Query: 197 VVQDYEKEKRLFSLIREL 214
V + EK+ +L L+ E+
Sbjct: 398 VCMESEKDHKLIQLMEEI 415
Score = 258 (95.9 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 91 HRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLN 150
H+ + + MA+ K I+FVETK++ +D+TR +RR+ A+CIHGDK+Q +RD+VLN
Sbjct: 406 HKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 464
Query: 151 DFRQGKAPILVATDVAARGLDVEDVNTV 178
+FR GKAPIL+ATDVA+RGLDVEDV V
Sbjct: 465 EFRSGKAPILIATDVASRGLDVEDVKFV 492
>UNIPROTKB|F1SKQ0 [details] [associations]
symbol:DDX17 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072358 "cardiovascular system development"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0009791 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 GO:GO:0072358 OMA:QQFPQPP
EMBL:FP102457 Ensembl:ENSSSCT00000000110 Uniprot:F1SKQ0
Length = 736
Score = 290 (107.1 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 77/198 (38%), Positives = 119/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA ++ S L++ CI+GG PK
Sbjct: 227 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVADDYGKCSRLKSTCIYGGAPK 286
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E+ K + T + E + + G +
Sbjct: 287 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLESGKTNLRRCTYLVLDEADRMLDM-GFEP 339
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + D +N+G+L+LSANHNI Q+++
Sbjct: 340 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLRDYTQINVGNLELSANHNILQIVD 397
Query: 197 VVQDYEKEKRLFSLIREL 214
V + EK+ +L L+ E+
Sbjct: 398 VCMESEKDHKLIQLMEEI 415
Score = 258 (95.9 bits), Expect = 3.9e-21, P = 3.9e-21
Identities = 50/88 (56%), Positives = 68/88 (77%)
Query: 91 HRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLN 150
H+ + + MA+ K I+FVETK++ +D+TR +RR+ A+CIHGDK+Q +RD+VLN
Sbjct: 406 HKLIQLMEEIMAEKEN-KTIIFVETKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLN 464
Query: 151 DFRQGKAPILVATDVAARGLDVEDVNTV 178
+FR GKAPIL+ATDVA+RGLDVEDV V
Sbjct: 465 EFRSGKAPILIATDVASRGLDVEDVKFV 492
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 289 (106.8 bits), Expect = 1.5e-24, P = 1.5e-24
Identities = 77/198 (38%), Positives = 120/198 (60%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA ++ SS +++ C++GG PK
Sbjct: 149 YLLPAIVHINHQPYLERGDGPICLVLAPTRELAQQVQQVAFDYGKSSRIKSTCVYGGAPK 208
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I F+E K + T + E + + G +
Sbjct: 209 GPQ-IRDLERGVEIC---IA-TPG-RLIDFLEVGKTNLRRCTYLVLDEADRMLDM-GFEP 261
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D ++D +NIG+L+LSANHNI Q+++
Sbjct: 262 QIRK--IVDQIRPDRQTLMWSATWPKEVRQLAEDFLQDYVQINIGALELSANHNILQIVD 319
Query: 197 VVQDYEKEKRLFSLIREL 214
V + EK+ +L L+ E+
Sbjct: 320 VCMENEKDNKLIQLMEEI 337
Score = 250 (93.1 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 46/71 (64%), Positives = 60/71 (84%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K I+FVETKK+ +++TR +RR+ A+CIHGDK+Q +RD+VL +FR GKAPIL+ATDVA+
Sbjct: 344 KTIIFVETKKRCDELTRRMRRDGWPAMCIHGDKSQPERDWVLTEFRSGKAPILIATDVAS 403
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 404 RGLDVEDVKFV 414
>UNIPROTKB|G3MYF0 [details] [associations]
symbol:LOC100300937 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:GLKSICI EMBL:DAAA02074437
Ensembl:ENSBTAT00000065115 Uniprot:G3MYF0
Length = 608
Score = 179 (68.1 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 48/136 (35%), Positives = 71/136 (52%)
Query: 98 QYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKA 157
++ + +P KVIVFV K +D++ L + +HGD+ Q DRD L DFR G+
Sbjct: 438 EFLQSLSPKDKVIVFVSRKLVADDLSSDLSIQGIPVQSLHGDREQSDRDQALEDFRTGRV 497
Query: 158 PILVATDVAARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGK- 216
IL+ATD+AARGLDV DV V N+N + IE +Y ++G+
Sbjct: 498 KILIATDLAARGLDVSDVTHVY--------NYNFPRNIE---EYVHRVGRTGRAGKIGES 546
Query: 217 YTLITQESSSTLSEMV 232
TL+TQ+ E++
Sbjct: 547 ITLVTQDDWKIADELI 562
Score = 130 (50.8 bits), Expect = 5.7e-24, Sum P(2) = 5.7e-24
Identities = 31/67 (46%), Positives = 43/67 (64%)
Query: 25 YMLPAAVHISHQEPV--KQGDGPIALVLAPTRELAQQIQT-VAKEFSSALRNICIFGG-T 80
Y++P +HI H +PV KQ +GP LVL PTRELA Q++ +K L+++CI+GG
Sbjct: 255 YLMPGFIHI-HSQPVSRKQRNGPGMLVLTPTRELALQVEAECSKYLYKGLKSVCIYGGGN 313
Query: 81 PKGP-QD 86
KG QD
Sbjct: 314 RKGQIQD 320
Score = 42 (19.8 bits), Expect = 3.4e-06, Sum P(2) = 3.4e-06
Identities = 14/36 (38%), Positives = 21/36 (58%)
Query: 178 VNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRE 213
V +G+L L + + Q I V E+EKR SL++E
Sbjct: 407 VYVGTLDLVTVNTVKQNIIVTT--EEEKR--SLVKE 438
>FB|FBgn0035720 [details] [associations]
symbol:CG10077 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005875
EMBL:AE014296 GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779 KO:K12823
GeneTree:ENSGT00660000095174 HSSP:P10081 UniGene:Dm.7301
GeneID:38756 KEGG:dme:Dmel_CG10077 FlyBase:FBgn0035720
ChiTaRS:CG10077 GenomeRNAi:38756 NextBio:810234 EMBL:AY102660
RefSeq:NP_648062.2 SMR:Q8MZI3 IntAct:Q8MZI3 MINT:MINT-863686
STRING:Q8MZI3 EnsemblMetazoa:FBtr0076940 EnsemblMetazoa:FBtr0333083
UCSC:CG10077-RA InParanoid:Q8MZI3 OMA:WRACAIH Uniprot:Q8MZI3
Length = 818
Score = 276 (102.2 bits), Expect = 5.5e-23, P = 5.5e-23
Identities = 86/219 (39%), Positives = 123/219 (56%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI++Q +++GDGPIALVLAPTRELAQQIQ VA EF S +RN CIFGG PK
Sbjct: 211 YVLPAVVHINNQPRLERGDGPIALVLAPTRELAQQIQQVAIEFGSNTHVRNTCIFGGAPK 270
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
G Q L R V + +A P ++I F+E ++ T + E + + G +
Sbjct: 271 G-QQARDLERGV---EIVIA-TPG-RLIDFLERGTTSLKRCTYLVLDEADRMLDM-GFEP 323
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT-DVAARGLDVEDVNT---VNIGSLQLSANHNISQVIE 196
Q + ++ R + ++ AT R L E +N VNIGSL LSANHNI Q+++
Sbjct: 324 QIRK--IMQQIRPDRQVLMWSATWPKEVRQLAEEFLNNYIQVNIGSLSLSANHNILQIVD 381
Query: 197 VVQDYEKEKRLFSLIRELGKY----TLITQESSSTLSEM 231
V + EK +L L+ ++ T+I E+ + E+
Sbjct: 382 VCDENEKLMKLIKLLTDISAENETKTIIFVETKKRVDEI 420
Score = 230 (86.0 bits), Expect = 4.7e-18, P = 4.7e-18
Identities = 47/77 (61%), Positives = 60/77 (77%)
Query: 102 AKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILV 161
A+N K I+FVETKK+V++ITR + R+ A IHGDK+QQ+RD+VL+ FR G+ ILV
Sbjct: 401 AENET-KTIIFVETKKRVDEITRNISRQGWRACAIHGDKSQQERDFVLSSFRNGRHSILV 459
Query: 162 ATDVAARGLDVEDVNTV 178
ATDVAARGLDV+DV V
Sbjct: 460 ATDVAARGLDVDDVKFV 476
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 273 (101.2 bits), Expect = 1.5e-22, P = 1.5e-22
Identities = 77/200 (38%), Positives = 117/200 (58%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA----LRNICIFGGT 80
YMLPA VHI +Q P+ +G+GPIALVLAPTRELAQQIQ+V +++ +R+ CIFGG+
Sbjct: 291 YMLPAIVHIGNQPPIIRGEGPIALVLAPTRELAQQIQSVVRDYGHLCKPEIRHTCIFGGS 350
Query: 81 PKGPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKK-KVEDITRALRRERHSAICIHGD 139
K PQ L R V + +A P ++I F+E + ++ T + E + + G
Sbjct: 351 SKVPQ-ARDLDRGV---EVIIA-TPG-RLIDFLENRNTNLQRCTYLVLDEADRMLDM-GF 403
Query: 140 KTQQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQV 194
+ Q + ++ R + ++ AT +V A D + D +NIGS+ LSANHNI Q+
Sbjct: 404 EPQIRK--IIEQIRPDRQVVMWSATWPKEVQALAGDFLNDYIQINIGSMNLSANHNIRQI 461
Query: 195 IEVVQDYEKEKRLFSLIREL 214
+E+ + EK +RL L+ E+
Sbjct: 462 VEICTEIEKPQRLVCLLNEI 481
Score = 235 (87.8 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 48/75 (64%), Positives = 58/75 (77%)
Query: 104 NPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVAT 163
N K+IVFVETK KVEDI + +R E ++A IHGDKTQ +RD VL DFR GK+ IL+AT
Sbjct: 489 NNGNKIIVFVETKIKVEDILQIIRAEGYNATSIHGDKTQNERDSVLKDFRNGKSNILIAT 548
Query: 164 DVAARGLDVEDVNTV 178
DVA+RGLDVED+ V
Sbjct: 549 DVASRGLDVEDLQYV 563
>UNIPROTKB|I3LHW0 [details] [associations]
symbol:I3LHW0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 Ensembl:ENSSSCT00000032137 OMA:FESQIMK
Uniprot:I3LHW0
Length = 621
Score = 171 (65.3 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 48/142 (33%), Positives = 75/142 (52%)
Query: 92 RFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLND 151
R +F ++ + +P KVIVFV K +D++ L + +HGD+ Q DR+ L+D
Sbjct: 447 RSLFQ-EFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDD 505
Query: 152 FRQGKAPILVATDVAARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLI 211
F+ GK IL+ATD+A+RGLDV DV V N+N + IE +Y
Sbjct: 506 FKTGKVKILIATDLASRGLDVSDVTHV--------FNYNFPRNIE---EYVHRVGRTGRA 554
Query: 212 RELGK-YTLITQESSSTLSEMV 232
++G+ TL+TQ+ E++
Sbjct: 555 GKMGESVTLMTQDDWKVAGELI 576
Score = 124 (48.7 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 25 YMLPAAVHISHQEPVKQG--DGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIFGG-T 80
Y++P +H++ Q PV +G +GP LVL PTRELA Q+ ++S L+++CI+GG
Sbjct: 269 YLMPGFIHLNSQ-PVSRGKRNGPGMLVLTPTRELALQVGAECSKYSYKGLKSVCIYGGGN 327
Query: 81 PKGP-QDCL 88
KG QD +
Sbjct: 328 RKGQIQDIM 336
Score = 39 (18.8 bits), Expect = 4.0e-05, Sum P(2) = 4.0e-05
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 178 VNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRE 213
V +G+L L A + Q I + E+EKR SL +E
Sbjct: 421 VYVGTLDLVAVDTVKQNIIITT--EEEKR--SLFQE 452
>UNIPROTKB|F1SQ03 [details] [associations]
symbol:LOC100524536 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GLKSICI EMBL:CU927956 RefSeq:XP_003135023.1
ProteinModelPortal:F1SQ03 Ensembl:ENSSSCT00000013311
GeneID:100524536 Uniprot:F1SQ03
Length = 630
Score = 171 (65.3 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 48/142 (33%), Positives = 75/142 (52%)
Query: 92 RFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLND 151
R +F ++ + +P KVIVFV K +D++ L + +HGD+ Q DR+ L+D
Sbjct: 456 RSLFQ-EFLQSLSPKDKVIVFVSRKLIADDLSSDLSIQGIPVQSLHGDREQSDRERALDD 514
Query: 152 FRQGKAPILVATDVAARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLI 211
F+ GK IL+ATD+A+RGLDV DV V N+N + IE +Y
Sbjct: 515 FKTGKVKILIATDLASRGLDVSDVTHV--------FNYNFPRNIE---EYVHRVGRTGRA 563
Query: 212 RELGK-YTLITQESSSTLSEMV 232
++G+ TL+TQ+ E++
Sbjct: 564 GKMGESVTLMTQDDWKVAGELI 585
Score = 124 (48.7 bits), Expect = 2.0e-22, Sum P(2) = 2.0e-22
Identities = 29/69 (42%), Positives = 44/69 (63%)
Query: 25 YMLPAAVHISHQEPVKQG--DGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIFGG-T 80
Y++P +H++ Q PV +G +GP LVL PTRELA Q+ ++S L+++CI+GG
Sbjct: 278 YLMPGFIHLNSQ-PVSRGKRNGPGMLVLTPTRELALQVGAECSKYSYKGLKSVCIYGGGN 336
Query: 81 PKGP-QDCL 88
KG QD +
Sbjct: 337 RKGQIQDIM 345
Score = 39 (18.8 bits), Expect = 4.1e-05, Sum P(2) = 4.1e-05
Identities = 14/36 (38%), Positives = 20/36 (55%)
Query: 178 VNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRE 213
V +G+L L A + Q I + E+EKR SL +E
Sbjct: 430 VYVGTLDLVAVDTVKQNIIITT--EEEKR--SLFQE 461
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 167 (63.8 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 29/69 (42%), Positives = 48/69 (69%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++FVE ++K +++ R L R+ + + +HG K Q DRD ++DF+ G P+++AT VAARG
Sbjct: 632 LIFVERQEKADELLRELLRKGYGCMSLHGGKDQVDRDSTISDFKSGVCPVMIATSVAARG 691
Query: 170 LDVEDVNTV 178
LDV+ + V
Sbjct: 692 LDVKQLKLV 700
Score = 144 (55.7 bits), Expect = 5.4e-22, Sum P(2) = 5.4e-22
Identities = 30/59 (50%), Positives = 37/59 (62%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTP 81
++LP HI QEPVK +GPI L+L PTRELA QI K F + LR +C +GG P
Sbjct: 432 FLLPMFRHIKDQEPVKDNEGPIGLILTPTRELAVQIFRDCKPFLKTLGLRAVCAYGGPP 490
Score = 52 (23.4 bits), Expect = 1.8e-08, Sum P(2) = 1.8e-08
Identities = 12/39 (30%), Positives = 22/39 (56%)
Query: 178 VNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGK 216
+ +G + A+ I+Q++E+ + K RL L+ EL K
Sbjct: 587 IEVGGKSVVASE-ITQIVEIRDEKSKFNRLLELLGELYK 624
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 193 (73.0 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 522 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAA 581
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 582 RGLDIENVQHV 592
Score = 98 (39.6 bits), Expect = 6.3e-22, Sum P(2) = 6.3e-22
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 25 YMLPAAVHISHQ----EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFG 78
++LP H+ H K+ P +++APTREL QI A++FS + +R + I+G
Sbjct: 322 FLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYG 381
Query: 79 GTPKG 83
GT G
Sbjct: 382 GTQLG 386
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 193 (73.0 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 540 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAA 599
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 600 RGLDIENVQHV 610
Score = 98 (39.6 bits), Expect = 6.8e-22, Sum P(2) = 6.8e-22
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 25 YMLPAAVHISHQ----EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFG 78
++LP H+ H K+ P +++APTREL QI A++FS + +R + I+G
Sbjct: 340 FLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYG 399
Query: 79 GTPKG 83
GT G
Sbjct: 400 GTQLG 404
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 193 (73.0 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 542 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRFGKCPVLVATSVAA 601
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 602 RGLDIENVQHV 612
Score = 98 (39.6 bits), Expect = 6.9e-22, Sum P(2) = 6.9e-22
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 25 YMLPAAVHISHQ----EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFG 78
++LP H+ H K+ P +++APTREL QI A++FS + +R + I+G
Sbjct: 342 FLLPILAHMMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYG 401
Query: 79 GTPKG 83
GT G
Sbjct: 402 GTQLG 406
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 262 (97.3 bits), Expect = 7.3e-22, P = 7.3e-22
Identities = 79/200 (39%), Positives = 112/200 (56%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y LPA VHI+ Q + GDGPI L+LAPTRELA QIQ +F SS +RN C++GG PK
Sbjct: 179 YCLPAIVHINAQPLLAPGDGPIVLILAPTRELAVQIQAEISKFGKSSRIRNTCVYGGVPK 238
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I +E+ K + +T + E + + G +
Sbjct: 239 GPQ-IRDLSRGVEVC---IA-TPG-RLIDMLESGKTNLRRVTYLVLDEADRMLDM-GFEP 291
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + ++ R + ++ AT +V D ++D VNIGSL LSANH I+Q++E
Sbjct: 292 QIRK--IIGQIRPDRQTLMWSATWPKEVRNMAADFLQDFIQVNIGSLDLSANHRITQIVE 349
Query: 197 VVQDYEKEKRLFSLIRELGK 216
VV + EK R+ IR + K
Sbjct: 350 VVSESEKRDRM---IRHMEK 366
Score = 206 (77.6 bits), Expect = 8.8e-16, P = 8.8e-16
Identities = 38/76 (50%), Positives = 58/76 (76%)
Query: 103 KNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVA 162
K+ K+++FV TK+ ++ITR LR++ A+ IHGDK Q +RD+VL+ F+ GK+PI+VA
Sbjct: 371 KDSKNKILIFVGTKRVADEITRFLRQDGWPALSIHGDKQQNERDWVLDQFKTGKSPIMVA 430
Query: 163 TDVAARGLDVEDVNTV 178
TDVA+RG+DV ++ V
Sbjct: 431 TDVASRGIDVRNITHV 446
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 193 (73.0 bits), Expect = 8.8e-22, Sum P(2) = 8.8e-22
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 543 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAA 602
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 603 RGLDIENVQHV 613
Score = 97 (39.2 bits), Expect = 8.8e-22, Sum P(2) = 8.8e-22
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 25 YMLPAAVHISHQ----EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFG 78
++LP H+ H K+ P +++APTREL QI A++FS + +R + I+G
Sbjct: 343 FLLPILAHMMHDGITASCFKELQEPECIIVAPTRELVNQIYLEARKFSFGTCVRAVVIYG 402
Query: 79 GTPKG 83
GT G
Sbjct: 403 GTQLG 407
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 193 (73.0 bits), Expect = 8.9e-22, Sum P(2) = 8.9e-22
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 543 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAA 602
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 603 RGLDIENVQHV 613
Score = 97 (39.2 bits), Expect = 8.9e-22, Sum P(2) = 8.9e-22
Identities = 23/65 (35%), Positives = 36/65 (55%)
Query: 25 YMLPAAVHISHQ----EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFG 78
++LP H+ H K+ P +++APTREL QI A++FS + +R + I+G
Sbjct: 343 FLLPILAHMMHDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYG 402
Query: 79 GTPKG 83
GT G
Sbjct: 403 GTQLG 407
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 168 (64.2 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E++ L++E H+ +HGD Q +R+ V++DF++ P+LVATDVAAR
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAAR 560
Query: 169 GLDVEDVNTV 178
GLD+ + TV
Sbjct: 561 GLDIPSIKTV 570
Score = 137 (53.3 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGG 79
++ P +HI Q+ ++ GDGPIA+++ PTREL QQI K F A LR++ ++GG
Sbjct: 307 FIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGG 363
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 168 (64.2 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E++ L++E H+ +HGD Q +R+ V++DF++ P+LVATDVAAR
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAAR 560
Query: 169 GLDVEDVNTV 178
GLD+ + TV
Sbjct: 561 GLDIPSIKTV 570
Score = 137 (53.3 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGG 79
++ P +HI Q+ ++ GDGPIA+++ PTREL QQI K F A LR++ ++GG
Sbjct: 307 FIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGG 363
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 168 (64.2 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E++ L++E H+ +HGD Q +R+ V++DF++ P+LVATDVAAR
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAAR 560
Query: 169 GLDVEDVNTV 178
GLD+ + TV
Sbjct: 561 GLDIPSIKTV 570
Score = 137 (53.3 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGG 79
++ P +HI Q+ ++ GDGPIA+++ PTREL QQI K F A LR++ ++GG
Sbjct: 307 FIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGG 363
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 168 (64.2 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E++ L++E H+ +HGD Q +R+ V++DF++ P+LVATDVAAR
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAAR 560
Query: 169 GLDVEDVNTV 178
GLD+ + TV
Sbjct: 561 GLDIPSIKTV 570
Score = 137 (53.3 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGG 79
++ P +HI Q+ ++ GDGPIA+++ PTREL QQI K F A LR++ ++GG
Sbjct: 307 FIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAEGKRFGKAYNLRSVAVYGG 363
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 168 (64.2 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E++ L++E H+ +HGD Q +R+ V++DF++ P+LVATDVAAR
Sbjct: 500 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAAR 559
Query: 169 GLDVEDVNTV 178
GLD+ + TV
Sbjct: 560 GLDIPSIKTV 569
Score = 137 (53.3 bits), Expect = 1.3e-21, Sum P(2) = 1.3e-21
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGG 79
++ P +HI Q+ ++ GDGPIA+++ PTREL QQI K F A LR++ ++GG
Sbjct: 307 FIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGG 363
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 167 (63.8 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E++ L++E H+ +HGD Q +R+ V++DF++ P+LVATDVAAR
Sbjct: 501 VLLFVTKKANAEELASNLKQEGHNLGLLHGDMDQSERNKVISDFKKKDIPVLVATDVAAR 560
Query: 169 GLDVEDVNTV 178
GLD+ + TV
Sbjct: 561 GLDIPSIKTV 570
Score = 137 (53.3 bits), Expect = 2.3e-21, Sum P(2) = 2.3e-21
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGG 79
++ P +HI Q+ ++ GDGPIA+++ PTREL QQI K F A LR++ ++GG
Sbjct: 307 FIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGG 363
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 164 (62.8 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E++ L++E H+ +HGD Q +R+ V+++F++ PILVATDVAAR
Sbjct: 496 VLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAAR 555
Query: 169 GLDVEDVNTV 178
GLD+ + TV
Sbjct: 556 GLDIPSIKTV 565
Score = 138 (53.6 bits), Expect = 4.9e-21, Sum P(2) = 4.9e-21
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGG 79
++ P +HI Q+ ++ GDGPIA+++ PTREL QQI + K F A LR++ ++GG
Sbjct: 302 FIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGG 358
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 193 (73.0 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 516 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAA 575
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 576 RGLDIENVQHV 586
Score = 88 (36.0 bits), Expect = 6.0e-21, Sum P(2) = 6.0e-21
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 25 YMLPAAVHISHQ----EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFG 78
++LP H+ K+ P +++APTREL QI A++FS + +R + I+G
Sbjct: 316 FLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYG 375
Query: 79 GTPKG 83
GT G
Sbjct: 376 GTQFG 380
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 193 (73.0 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 544 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAA 603
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 604 RGLDIENVQHV 614
Score = 89 (36.4 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 25 YMLPAAVHISHQ----EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFG 78
++LP H+ K+ P +++APTREL QI A++FS + +R + I+G
Sbjct: 344 FLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYG 403
Query: 79 GTPKG 83
GT G
Sbjct: 404 GTQLG 408
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 193 (73.0 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 544 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAA 603
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 604 RGLDIENVQHV 614
Score = 89 (36.4 bits), Expect = 6.1e-21, Sum P(2) = 6.1e-21
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 25 YMLPAAVHISHQ----EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFG 78
++LP H+ K+ P +++APTREL QI A++FS + +R + I+G
Sbjct: 344 FLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYG 403
Query: 79 GTPKG 83
GT G
Sbjct: 404 GTQLG 408
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 193 (73.0 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 515 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAA 574
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 575 RGLDIENVQHV 585
Score = 88 (36.0 bits), Expect = 6.9e-21, Sum P(2) = 6.9e-21
Identities = 22/65 (33%), Positives = 35/65 (53%)
Query: 25 YMLPAAVHISHQ----EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFG 78
++LP H+ K+ P +++APTREL QI A++FS + +R + I+G
Sbjct: 315 FLLPILAHMMRDGITASRFKELQEPECIIVAPTRELINQIYLEARKFSFGTCVRAVVIYG 374
Query: 79 GTPKG 83
GT G
Sbjct: 375 GTQFG 379
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 193 (73.0 bits), Expect = 8.8e-21, Sum P(2) = 8.8e-21
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 522 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAA 581
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 582 RGLDIENVQHV 592
Score = 87 (35.7 bits), Expect = 8.8e-21, Sum P(2) = 8.8e-21
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 25 YMLPAAVHISHQ----EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFG 78
++LP H+ K P +++APTREL QI A++FS + +R + I+G
Sbjct: 320 FLLPILAHMMRDGVTASRFKDQQEPECIIVAPTRELINQIFLEARKFSFGTCVRPVVIYG 379
Query: 79 GTPKG 83
GT G
Sbjct: 380 GTQLG 384
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 183 (69.5 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 36/70 (51%), Positives = 50/70 (71%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
++VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAAR
Sbjct: 442 ILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAAR 501
Query: 169 GLDVEDVNTV 178
GLD+ +V V
Sbjct: 502 GLDISNVKHV 511
Score = 96 (38.9 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 265 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 307
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 183 (69.5 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 36/70 (51%), Positives = 50/70 (71%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
++VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAAR
Sbjct: 443 ILVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAAR 502
Query: 169 GLDVEDVNTV 178
GLD+ +V V
Sbjct: 503 GLDISNVKHV 512
Score = 96 (38.9 bits), Expect = 9.7e-21, Sum P(2) = 9.7e-21
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 308
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 164 (62.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E++ L++E H+ +HGD Q +R+ V+++F++ PILVATDVAAR
Sbjct: 501 VLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAAR 560
Query: 169 GLDVEDVNTV 178
GLD+ + TV
Sbjct: 561 GLDIPSIKTV 570
Score = 138 (53.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGG 79
++ P +HI Q+ ++ GDGPIA+++ PTREL QQI + K F A LR++ ++GG
Sbjct: 307 FIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGG 363
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 164 (62.8 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 31/70 (44%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E++ L++E H+ +HGD Q +R+ V+++F++ PILVATDVAAR
Sbjct: 503 VLLFVTKKANAEELANNLKQEDHNLGLLHGDMDQSERNKVISEFKKKGIPILVATDVAAR 562
Query: 169 GLDVEDVNTV 178
GLD+ + TV
Sbjct: 563 GLDIPSIKTV 572
Score = 138 (53.6 bits), Expect = 1.1e-20, Sum P(2) = 1.1e-20
Identities = 25/57 (43%), Positives = 39/57 (68%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGG 79
++ P +HI Q+ ++ GDGPIA+++ PTREL QQI + K F A LR++ ++GG
Sbjct: 309 FIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHSECKRFGKAYNLRSVAVYGG 365
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 251 (93.4 bits), Expect = 1.2e-20, P = 1.2e-20
Identities = 78/219 (35%), Positives = 119/219 (54%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y LP+ VHI+ Q ++ GDGPI LVLAPTRELA QIQT +F SS +RN C++GG PK
Sbjct: 181 YCLPSIVHINAQPQLQYGDGPIVLVLAPTRELAVQIQTECSKFGKSSRIRNTCVYGGAPK 240
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
GPQ L R V C +A P ++I +E K ++ +T + E + + G +
Sbjct: 241 GPQ-IRDLARGVEIC---IA-TPG-RLIDMLEAGKTNLKRVTYLVLDEADRMLDM-GFEP 293
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + D V IGSL+L+A+H I+Q++E
Sbjct: 294 QIRK--IVDQIRPDRQTLMWSATWPKEVQQLTRDYLNDPIQVTIGSLELAASHTITQLVE 351
Query: 197 VVQDYEKEKRLF----SLIRELGKYTLITQESSSTLSEM 231
V+ ++ K RL S + E L+ + T E+
Sbjct: 352 VIDEFSKRDRLVKHLESALNEKDNKILVFASTKRTCDEI 390
Score = 197 (74.4 bits), Expect = 8.7e-15, P = 8.7e-15
Identities = 37/71 (52%), Positives = 53/71 (74%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K++VF TK+ ++IT LR + A+ IHGDK Q +RD+VL++FR+GK I+VATDVAA
Sbjct: 376 KILVFASTKRTCDEITTYLRSDGWPALAIHGDKEQNERDWVLDEFRKGKTSIMVATDVAA 435
Query: 168 RGLDVEDVNTV 178
RG+DV+ + V
Sbjct: 436 RGIDVKGITHV 446
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 220 (82.5 bits), Expect = 3.1e-17, P = 3.1e-17
Identities = 63/182 (34%), Positives = 96/182 (52%)
Query: 9 CQ--NFSKITNYLLSPPQYMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKE 66
CQ N ++T +L ML ++ V Q P L + ++++T+A++
Sbjct: 305 CQHTNLKRVTYLVLDEADRMLDMGFEPQIRKIVSQ-IRPDRQTLLWSATWPREVETLARQ 363
Query: 67 FSSALRNI--CIFGGTP-KGPQDCLPLHRFV-----FNCQYEMAKN--PAFKVIVFVETK 116
F LR+ I G T K Q + V +N + K K+++FVETK
Sbjct: 364 F---LRDPYKAIIGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVETK 420
Query: 117 KKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARGLDVEDVN 176
+ + +TR LR + A+ IHGDKTQ +RD VL +F+ G++PI+ ATDVAARGLDV+D+
Sbjct: 421 RGCDQVTRQLRMDGWPALAIHGDKTQSERDRVLAEFKSGRSPIMTATDVAARGLDVKDIK 480
Query: 177 TV 178
V
Sbjct: 481 CV 482
Score = 189 (71.6 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 37/63 (58%), Positives = 47/63 (74%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPK 82
Y+LPA VH+S Q + Q DGPI L+LAPTRELA QIQ +++F S +R+ CI+GG PK
Sbjct: 219 YLLPALVHVSAQPRLGQDDGPIVLILAPTRELAVQIQEESRKFGLRSGVRSTCIYGGAPK 278
Query: 83 GPQ 85
GPQ
Sbjct: 279 GPQ 281
Score = 87 (35.7 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 180 IGSLQLSANHNISQVIEVVQDYEKEKRLFSLIREL--GKYTLITQES 224
IGS L AN +I+QVIE+V EK RL +L+++L G LI E+
Sbjct: 373 IGSTDLKANQSINQVIEIVPTPEKYNRLLTLLKQLMDGSKILIFVET 419
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 164 (62.8 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 31/70 (44%), Positives = 47/70 (67%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E++ L++E H+ +HGD Q +R+ V+ DF++ P+LVATDVAAR
Sbjct: 501 VLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERNKVILDFKKKDIPVLVATDVAAR 560
Query: 169 GLDVEDVNTV 178
GLD+ + TV
Sbjct: 561 GLDIPSIKTV 570
Score = 137 (53.3 bits), Expect = 1.3e-20, Sum P(2) = 1.3e-20
Identities = 25/57 (43%), Positives = 38/57 (66%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGG 79
++ P +HI Q+ ++ GDGPIA+++ PTREL QQI K F A LR++ ++GG
Sbjct: 307 FIWPMLIHIMDQKELEPGDGPIAVIVCPTRELCQQIHAECKRFGKAYNLRSVAVYGG 363
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 179 (68.1 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L RE ++ IHGD++Q+DR+ L+ FR G+ PILVAT VAARG
Sbjct: 477 LVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPILVATAVAARG 536
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 537 LDISNVKHV 545
Score = 99 (39.9 bits), Expect = 1.4e-20, Sum P(2) = 1.4e-20
Identities = 32/68 (47%), Positives = 39/68 (57%)
Query: 23 PQYMLPAAVHISHQEPVKQG---DGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIF 77
P L AA + S QE K G PI+LVLAPTRELA QI A++FS S +R ++
Sbjct: 275 PGEALQAAKN-SAQENGKYGRRKQYPISLVLAPTRELALQIYDEARKFSYRSHVRPCVVY 333
Query: 78 GGTPKGPQ 85
GG G Q
Sbjct: 334 GGADIGQQ 341
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 180 (68.4 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 440 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 499
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 500 LDISNVRHV 508
Score = 96 (38.9 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 262 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 304
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 180 (68.4 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 443 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 502
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 503 LDISNVRHV 511
Score = 96 (38.9 bits), Expect = 2.0e-20, Sum P(2) = 2.0e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 265 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 307
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 180 (68.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 444 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 503
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 504 LDISNVKHV 512
Score = 96 (38.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 308
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 180 (68.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 445 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 504
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 505 LDISNVKHV 513
Score = 96 (38.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 309
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 180 (68.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 445 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 504
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 505 LDISNVKHV 513
Score = 96 (38.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 309
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 180 (68.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 445 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 504
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 505 LDISNVKHV 513
Score = 96 (38.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 309
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 180 (68.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 445 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 504
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 505 LDISNVKHV 513
Score = 96 (38.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQ 309
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 180 (68.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 445 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 504
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 505 LDISNVKHV 513
Score = 96 (38.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGAEIGQQ 309
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 180 (68.4 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 446 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 505
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 506 LDISNVKHV 514
Score = 96 (38.9 bits), Expect = 2.1e-20, Sum P(2) = 2.1e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 268 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 310
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 248 (92.4 bits), Expect = 2.4e-20, P = 2.4e-20
Identities = 73/191 (38%), Positives = 107/191 (56%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y LP VHI+ Q + GDGPI LVLAPTRELA QIQT +F SS +RN C++GG PK
Sbjct: 167 YCLPGIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPK 226
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVET-KKKVEDITRALRRERHSAICIHGDKT 141
Q L R + +A P ++I +E K ++ +T + E + + G +
Sbjct: 227 S-QQIRDLSR---GSEIVIA-TPG-RLIDMLEIGKTNLKRVTYLVLDEADRMLDM-GFEP 279
Query: 142 QQDRDYVLNDFRQGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIE 196
Q + +++ R + ++ AT +V D + D V +GSL+LSA+HNI+Q++E
Sbjct: 280 QIRK--IVDQIRPDRQTLMWSATWPKEVKQLAADYLNDPIQVQVGSLELSASHNITQIVE 337
Query: 197 VVQDYEKEKRL 207
VV D+EK RL
Sbjct: 338 VVSDFEKRDRL 348
Score = 215 (80.7 bits), Expect = 9.3e-17, P = 9.3e-17
Identities = 38/72 (52%), Positives = 56/72 (77%)
Query: 107 FKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVA 166
+K ++F TK+ +DIT+ LR + A+ IHGDK Q++RD+VL +FR G++PI+VATDVA
Sbjct: 361 YKTLIFASTKRMCDDITKYLREDGWPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVA 420
Query: 167 ARGLDVEDVNTV 178
ARG+DV+ +N V
Sbjct: 421 ARGIDVKGINYV 432
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 180 (68.4 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 489 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 548
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 549 LDISNVKHV 557
Score = 96 (38.9 bits), Expect = 2.5e-20, Sum P(2) = 2.5e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS S +R ++GG G Q
Sbjct: 309 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGGADIGQQ 351
>RGD|2314437 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 Y-linked"
species:10116 "Rattus norvegicus" [GO:0005737 "cytoplasm"
evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:2314437 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K11594 CTD:8653
EMBL:FJ775727 IPI:IPI00196210 RefSeq:NP_001161137.1
UniGene:Rn.95841 ProteinModelPortal:C9WPN2 PRIDE:C9WPN2
GeneID:100312982 KEGG:rno:100312982 UCSC:RGD:2314437 Uniprot:C9WPN2
Length = 652
Score = 184 (69.8 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L +ER++ IHGD++Q+DR+ L+ FR G+ PILVAT VAARG
Sbjct: 438 LVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARG 497
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 498 LDISNVKHV 506
Score = 90 (36.7 bits), Expect = 3.1e-20, Sum P(2) = 3.1e-20
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGG 79
PI+LVLAPTRELA QI A++FS S +R ++GG
Sbjct: 260 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGG 296
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 184 (69.8 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 36/69 (52%), Positives = 50/69 (72%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L +ER++ IHGD++Q+DR+ L+ FR G+ PILVAT VAARG
Sbjct: 444 LVFVETKKGADSLENFLFQERYACTSIHGDRSQKDREEALHQFRSGRKPILVATAVAARG 503
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 504 LDISNVKHV 512
Score = 90 (36.7 bits), Expect = 3.2e-20, Sum P(2) = 3.2e-20
Identities = 21/37 (56%), Positives = 27/37 (72%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGG 79
PI+LVLAPTRELA QI A++FS S +R ++GG
Sbjct: 266 PISLVLAPTRELAVQIYEEARKFSYRSRVRPCVVYGG 302
>UNIPROTKB|B4DLW8 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012587 Pfam:PF00270 Pfam:PF00271
Pfam:PF08061 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003676 GO:GO:0003712
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 GO:GO:0003724 HOVERGEN:HBG015893 UniGene:Hs.279806
HGNC:HGNC:2746 ChiTaRS:DDX5 EMBL:AK297192 IPI:IPI00798375
STRING:B4DLW8 Ensembl:ENST00000450599 UCSC:uc010wqa.1
Uniprot:B4DLW8
Length = 535
Score = 246 (91.7 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 72/186 (38%), Positives = 107/186 (57%)
Query: 36 QEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPKGPQDCLPLHRF 93
+E +GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PKGPQ L R
Sbjct: 80 KEITVRGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ-IRDLERG 138
Query: 94 VFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFR 153
V C +A P ++I F+E K T L + + G + Q + +++ R
Sbjct: 139 VEIC---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRK--IVDQIR 191
Query: 154 QGKAPIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLF 208
+ ++ AT +V D ++D +NIG+L+LSANHNI Q+++V D EK+++L
Sbjct: 192 PDRQTLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEKLI 251
Query: 209 SLIREL 214
L+ E+
Sbjct: 252 RLMEEI 257
Score = 245 (91.3 bits), Expect = 4.9e-20, P = 4.9e-20
Identities = 46/71 (64%), Positives = 61/71 (85%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVFVETK++ +++TR +RR+ A+ IHGDK+QQ+RD+VLN+F+ GKAPIL+ATDVA+
Sbjct: 264 KTIVFVETKRRCDELTRKMRRDGWPAMGIHGDKSQQERDWVLNEFKHGKAPILIATDVAS 323
Query: 168 RGLDVEDVNTV 178
RGLDVEDV V
Sbjct: 324 RGLDVEDVKFV 334
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 246 (91.7 bits), Expect = 4.1e-20, P = 4.1e-20
Identities = 74/199 (37%), Positives = 107/199 (53%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
Y LPA VHI+ Q + GDGPI LVLAPTRELA QIQ +F SS +RN C++GG P+
Sbjct: 176 YCLPAIVHINAQPLLSPGDGPIVLVLAPTRELAVQIQQECTKFGKSSRIRNTCVYGGVPR 235
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
GPQ L R V C +A P + + K + +T + E + + G + Q
Sbjct: 236 GPQ-IRDLIRGVEIC---IA-TPGRLLDMLDSNKTNLRRVTYLVLDEADRMLDM-GFEPQ 289
Query: 143 QDRDYVLNDFRQGKAPILV-AT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V D + D V +GSL L+A+HNI Q++EV
Sbjct: 290 IRK--IVDQIRPDRQTVMFSATWPKEVQRLARDYLNDYIQVTVGSLDLAASHNIKQIVEV 347
Query: 198 VQDYEKEKRLFSLIRELGK 216
V + +K RL I E+ K
Sbjct: 348 VDNADKRARLGKDIEEVLK 366
Score = 221 (82.9 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 42/79 (53%), Positives = 60/79 (75%)
Query: 100 EMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPI 159
E+ K+ KV++F TK+ +DITR LR++ A+ IHGDK Q +RD+VLN+FR GK+PI
Sbjct: 363 EVLKDRDNKVLIFTGTKRVADDITRFLRQDGWPALAIHGDKAQDERDWVLNEFRTGKSPI 422
Query: 160 LVATDVAARGLDVEDVNTV 178
+VATDVA+RG+DV+ + V
Sbjct: 423 MVATDVASRGIDVKGITHV 441
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 180 (68.4 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 445 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 504
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 505 LDISNVKHV 513
Score = 92 (37.4 bits), Expect = 5.4e-20, Sum P(2) = 5.4e-20
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFSSALRNI-CI-FGGTPKGPQ 85
PI+LVLAPTRELA QI A++FS R + C+ +GG G Q
Sbjct: 267 PISLVLAPTRELAVQIYEEARKFSYRSRVLPCVVYGGADIGQQ 309
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 178 (67.7 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 422 LVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 481
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 482 LDISNVKHV 490
Score = 93 (37.8 bits), Expect = 6.1e-20, Sum P(2) = 6.1e-20
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++F+ S +R ++GG G Q
Sbjct: 244 PISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQ 286
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 178 (67.7 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 423 LVFVETKKGADALEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 482
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 483 LDISNVKHV 491
Score = 93 (37.8 bits), Expect = 6.2e-20, Sum P(2) = 6.2e-20
Identities = 22/43 (51%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
PI+LVLAPTRELA QI A++F+ S +R ++GG G Q
Sbjct: 245 PISLVLAPTRELAVQIYEEARKFAYRSRVRPCVVYGGADIGQQ 287
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 177 (67.4 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 35/69 (50%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L RE ++ IHGD++Q+DR+ L+ FR G+ PI+VAT VAARG
Sbjct: 493 LVFVETKKGADALEDFLYREGYACTSIHGDRSQRDREEALHQFRSGRCPIMVATAVAARG 552
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 553 LDISNVKHV 561
Score = 95 (38.5 bits), Expect = 6.8e-20, Sum P(2) = 6.8e-20
Identities = 23/49 (46%), Positives = 32/49 (65%)
Query: 39 VKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
V++ PI+LVLAPTRELA QI A++F+ S +R ++GG G Q
Sbjct: 309 VRRKQYPISLVLAPTRELALQIYDEARKFAYRSRVRPCVVYGGADIGQQ 357
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 167 (63.8 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 36/86 (41%), Positives = 54/86 (62%)
Query: 93 FVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDF 152
+VF+ + M P KV++FV K K +D++ L + + +HGD+ Q DR+ L DF
Sbjct: 512 YVFDFIHRM--EPLDKVLIFVGKKLKADDLSSDLCLQGIAVQSLHGDREQCDREEALQDF 569
Query: 153 RQGKAPILVATDVAARGLDVEDVNTV 178
+ G+ ILVATD+A+RGLDV D+ V
Sbjct: 570 KDGRVRILVATDLASRGLDVHDITHV 595
Score = 120 (47.3 bits), Expect = 6.9e-20, Sum P(2) = 6.9e-20
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 25 YMLPAAVHISHQE-PVKQGDGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIFGGTPK 82
Y+LP +H+ Q P + +GP LVL PTRELA QI+ ++S ++ICI+GG +
Sbjct: 332 YLLPGFIHMDGQPMPRDKRNGPGMLVLTPTRELALQIEAECNKYSYKGFKSICIYGGGDR 391
Query: 83 GPQ 85
Q
Sbjct: 392 NAQ 394
Score = 62 (26.9 bits), Expect = 8.1e-07, Sum P(2) = 8.1e-07
Identities = 13/43 (30%), Positives = 25/43 (58%)
Query: 172 VEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIREL 214
++D V +G+L L+A + + Q + VQ+ EK+ +F I +
Sbjct: 478 LKDPMMVYVGTLDLAAVNTVQQTVLFVQEDEKKDYVFDFIHRM 520
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 181 (68.8 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 35/71 (49%), Positives = 52/71 (73%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFV+TKKK + I L +E+ + IHGD+ Q++R+ L DFR G+ P++VAT VAA
Sbjct: 540 RTMVFVKTKKKADFIATFLCQEKVPSTSIHGDREQKERETALRDFRTGQCPVIVATSVAA 599
Query: 168 RGLDVEDVNTV 178
RGLD+E+V+ V
Sbjct: 600 RGLDIENVSYV 610
Score = 89 (36.4 bits), Expect = 1.1e-19, Sum P(2) = 1.1e-19
Identities = 24/69 (34%), Positives = 40/69 (57%)
Query: 14 KITNYLLSPPQYMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SAL 71
K +LL +++ V S + +K+ P A+++APTREL QI A++FS + +
Sbjct: 336 KTAAFLLPILAHLMVKGVESSAFQTLKE---PEAIIVAPTRELINQIYLDARKFSYGTCV 392
Query: 72 RNICIFGGT 80
R + I+GGT
Sbjct: 393 RPVVIYGGT 401
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 177 (67.4 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 35/71 (49%), Positives = 49/71 (69%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETK++ + I L +E+ IHGD+ Q++R+ L DFR GK P+LVAT VA+
Sbjct: 435 RTMVFVETKRQADFIAAFLCQEKVPTTSIHGDREQREREKALADFRSGKCPVLVATSVAS 494
Query: 168 RGLDVEDVNTV 178
RGLD+ DV V
Sbjct: 495 RGLDIPDVQHV 505
Score = 88 (36.0 bits), Expect = 2.4e-19, Sum P(2) = 2.4e-19
Identities = 24/74 (32%), Positives = 40/74 (54%)
Query: 14 KITNYLLSPPQYMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SAL 71
K +LL Q ++ V S +++ P A+++APTREL QI A++FS + +
Sbjct: 231 KTAAFLLPILQQLMADGVAASRFSEIQE---PEAVIVAPTRELINQIYQEARKFSFGTCV 287
Query: 72 RNICIFGGTPKGPQ 85
R + ++GG G Q
Sbjct: 288 RPVVVYGGVNTGYQ 301
>UNIPROTKB|J3KRZ1 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270
PROSITE:PS00039 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AC009994
HGNC:HGNC:2746 ChiTaRS:DDX5 Ensembl:ENST00000577787 Uniprot:J3KRZ1
Length = 166
Score = 231 (86.4 bits), Expect = 2.5e-19, P = 2.5e-19
Identities = 68/174 (39%), Positives = 101/174 (58%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPKGPQDCLPLHRFVFNC 97
++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PKGPQ L R V C
Sbjct: 1 ERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPKGPQ-IRDLERGVEIC 59
Query: 98 QYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKA 157
+A P ++I F+E K T L + + G + Q + +++ R +
Sbjct: 60 ---IA-TPG-RLIDFLECGKTNLRRTTYLVLDEADRMLDMGFEPQIRK--IVDQIRPDRQ 112
Query: 158 PIL-VAT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKR 206
++ AT +V D ++D +NIG+L+LSANHNI Q+++V D EK+++
Sbjct: 113 TLMWSATWPKEVRQLAEDFLKDYIHINIGALELSANHNILQIVDVCHDVEKDEK 166
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 172 (65.6 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETK+ + + L A IHGD+TQQ+R+ L F+ G+ PILVATDVAARG
Sbjct: 412 LVFVETKRGADTLENWLCMNEFPATSIHGDRTQQEREVALRSFKTGRTPILVATDVAARG 471
Query: 170 LDVEDV-NTVN 179
LD+ V + VN
Sbjct: 472 LDIPHVAHVVN 482
Score = 91 (37.1 bits), Expect = 3.8e-19, Sum P(2) = 3.8e-19
Identities = 19/39 (48%), Positives = 28/39 (71%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTP 81
P A++L+PTRELA QI AK+FS + ++ + +GGTP
Sbjct: 230 PFAVILSPTRELACQIHDEAKKFSYQTGVKVVVAYGGTP 268
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 167 (63.8 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 38/106 (35%), Positives = 57/106 (53%)
Query: 95 FNCQYEMAKNPAF--KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDF 152
FN KN + K+I+F K + +D++ L + CIHG++ Q DR+ + D
Sbjct: 516 FNTITSFVKNMSSTDKIIIFCGRKVRADDLSSELTLDGFMTQCIHGNRDQMDREQAIADI 575
Query: 153 RQGKAPILVATDVAARGLDVEDVNTVNIGSLQLSANHNISQVIEVV 198
+ G ILVATDVA+RGLD+ED+ V + HNI + + V
Sbjct: 576 KSGVVRILVATDVASRGLDIEDITHV----INYDFPHNIEEYVHRV 617
Score = 111 (44.1 bits), Expect = 5.6e-19, Sum P(2) = 5.6e-19
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 25 YMLPAAVHISHQE-PVKQGDGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIFGGTPK 82
++LP +H +Q P G LVLAPTRELA QI+ K++S ++ +C++GG +
Sbjct: 337 FLLPGMIHTEYQSTPRGTRGGANVLVLAPTRELALQIEMEVKKYSFRGMKAVCVYGGGNR 396
Query: 83 GPQ 85
Q
Sbjct: 397 NMQ 399
Score = 66 (28.3 bits), Expect = 3.5e-06, Sum P(2) = 3.5e-06
Identities = 12/38 (31%), Positives = 26/38 (68%)
Query: 178 VNIGSLQLSANHNISQVIEVVQD-YEKEKRLFSLIREL 214
V +GSL L+A H++ Q+I++++D +K + S ++ +
Sbjct: 489 VCVGSLDLAATHSVKQIIKLMEDDMDKFNTITSFVKNM 526
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 159 (61.0 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 31/80 (38%), Positives = 49/80 (61%)
Query: 99 YEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAP 158
Y +N + ++FV+ ++ + + R L R+ + + IHG K Q DRD + DF+ G P
Sbjct: 786 YSTDENEDARSLIFVDRQEAADTLLRELMRKGYPCMSIHGGKDQIDRDSTIEDFKAGIFP 845
Query: 159 ILVATDVAARGLDVEDVNTV 178
+L+AT VAARGLDV+ + V
Sbjct: 846 VLIATSVAARGLDVKQLKLV 865
Score = 133 (51.9 bits), Expect = 6.0e-19, Sum P(2) = 6.0e-19
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGGTP 81
+++P HI Q P++ +GPI L++ PTRELA QI K F AL R +C +GG P
Sbjct: 595 FLIPMFRHIKDQRPLENMEGPIGLIMTPTRELATQIHKDCKPFLKALNLRAVCAYGGAP 653
Score = 44 (20.5 bits), Expect = 4.5e-06, Sum P(2) = 4.5e-06
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 191 ISQVIEVVQDYEKEKRLFSLIRELGKYTLITQESSSTL 228
I+Q++EV + +K RL L+ L Y+ E + +L
Sbjct: 762 ITQIVEVCNEEKKFVRLLELLGNL--YSTDENEDARSL 797
Score = 37 (18.1 bits), Expect = 2.3e-05, Sum P(2) = 2.3e-05
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 103 KNPAFKVIVFVETKKKVEDITRALRR 128
+NP ++V ET+ V + R L R
Sbjct: 1123 ENPKLYILVEGETELSVTNAMRELMR 1148
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 151 (58.2 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
VI+FV+ ++ + + + L R + + +HG Q DRD ++NDF+ G +LVAT VAAR
Sbjct: 621 VIIFVDKQEHADGLLKDLMRASYPCLSLHGGIDQYDRDSIINDFKNGTCKLLVATSVAAR 680
Query: 169 GLDVEDVNTV 178
GLDV+ + V
Sbjct: 681 GLDVKQLMLV 690
Score = 142 (55.0 bits), Expect = 9.4e-19, Sum P(2) = 9.4e-19
Identities = 27/58 (46%), Positives = 40/58 (68%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGGT 80
++LP HI Q +++G+GPIA+++ PTRELA QI K+FS L R +C++GGT
Sbjct: 425 FLLPMFRHIMDQRALEEGEGPIAVIMTPTRELALQITKECKKFSKTLGLRVVCVYGGT 482
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 153 (58.9 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
KV++FV K ED+ + L+ + + +HGD Q +R+ L FR+ K+ ILVATDVAA
Sbjct: 513 KVLIFVTKKLDSEDVAKKLKMKDFDIVLLHGDMLQAERNENLLKFRK-KSQILVATDVAA 571
Query: 168 RGLDVEDVNTV 178
RGLD+ ++ TV
Sbjct: 572 RGLDISEIRTV 582
Score = 136 (52.9 bits), Expect = 1.1e-18, Sum P(2) = 1.1e-18
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+ PA VHI Q +K G+GP+A+++ PTRELA Q+ AK+F + IC +GG K
Sbjct: 319 YLWPAIVHIMDQPDLKAGEGPVAVIVVPTRELAIQVFQEAKKFCKVYNINPICAYGGGSK 378
Query: 83 GPQ 85
Q
Sbjct: 379 WEQ 381
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 235 (87.8 bits), Expect = 1.3e-18, P = 1.3e-18
Identities = 65/199 (32%), Positives = 111/199 (55%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPK 82
++LP+ VHI+ Q +++ DGPI LVLAPTRELA QIQ +F +S + N C++GG K
Sbjct: 438 FLLPSIVHINAQPVLREDDGPIVLVLAPTRELALQIQEETNKFGGTSQISNTCVYGGASK 497
Query: 83 GPQDCLPLHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQ 142
Q L + V + +A P + + K + +T + E + + G + Q
Sbjct: 498 HTQ-VAALKKGV---EIVIA-TPGRLIDILESGKTNLRRVTYLVLDEADRMLDM-GFEPQ 551
Query: 143 QDRDYVLNDFRQGKAPILV-AT---DVAARGLD-VEDVNTVNIGSLQLSANHNISQVIEV 197
+ +++ R + ++ AT +V A D + D V+IGS +++ANHN+ Q++EV
Sbjct: 552 IRK--IISQIRPDRQTLMFSATWPKEVQALAHDFLTDHIQVHIGSTEITANHNVRQIVEV 609
Query: 198 VQDYEKEKRLFSLIRELGK 216
QD+EK++R+ S + +G+
Sbjct: 610 CQDFEKKERMLSFLGSVGR 628
Score = 200 (75.5 bits), Expect = 7.3e-15, P = 7.3e-15
Identities = 37/71 (52%), Positives = 54/71 (76%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
KVIVF ET+K V+D+ R L+ +I IHG+K+Q +RD+VL+ F+ G PI++ATDVA+
Sbjct: 631 KVIVFAETRKGVDDLQRVLQFSGFKSIGIHGNKSQPERDFVLSQFKNGMVPIMIATDVAS 690
Query: 168 RGLDVEDVNTV 178
RGLD++D+ V
Sbjct: 691 RGLDIKDIKYV 701
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 175 (66.7 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 35/71 (49%), Positives = 49/71 (69%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFV+TKKK + + L +E + IHGD+ Q++R+ L DFR GK ILVAT VA+
Sbjct: 421 RTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVAS 480
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 481 RGLDIENVQHV 491
Score = 81 (33.6 bits), Expect = 1.3e-18, Sum P(2) = 1.3e-18
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPKG 83
KQ + P +++APTREL QI A++F + +R + I+GGT G
Sbjct: 241 KQQE-PQCIIVAPTRELINQIFLEARKFVYGTCIRPVVIYGGTQTG 285
Score = 38 (18.4 bits), Expect = 4.0e-14, Sum P(2) = 4.0e-14
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 28 PAAVHISHQEPVKQGDGP-IALVLAPTRELAQQI 60
PA V E + G GP + V P E Q I
Sbjct: 104 PAGVLKGRSEEIDSGRGPKVTYVPPPPPEDEQSI 137
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 175 (66.7 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 35/71 (49%), Positives = 49/71 (69%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFV+TKKK + + L +E + IHGD+ Q++R+ L DFR GK ILVAT VA+
Sbjct: 421 RTMVFVDTKKKADYLAAFLCQENLPSTSIHGDREQREREIALRDFRSGKCQILVATSVAS 480
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 481 RGLDIENVQHV 491
Score = 81 (33.6 bits), Expect = 1.6e-18, Sum P(2) = 1.6e-18
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPKG 83
KQ + P +++APTREL QI A++F + +R + I+GGT G
Sbjct: 241 KQQE-PQCIIVAPTRELINQIFLEARKFVYGTCIRPVVIYGGTQTG 285
Score = 38 (18.4 bits), Expect = 4.7e-14, Sum P(2) = 4.7e-14
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 28 PAAVHISHQEPVKQGDGP-IALVLAPTRELAQQI 60
PA V E + G GP + V P E Q I
Sbjct: 104 PAGVLKGRSEEIDSGRGPKVTYVPPPPPEDEQSI 137
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 179 (68.1 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 36/71 (50%), Positives = 49/71 (69%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETK+ + I L +E+ S IHGD+ Q++R+ L+DFR G P+LVAT VAA
Sbjct: 531 RTMVFVETKRSADFIATFLCQEKISTTSIHGDREQREREKALSDFRLGHCPVLVATSVAA 590
Query: 168 RGLDVEDVNTV 178
RGLD+E V V
Sbjct: 591 RGLDIEQVQHV 601
Score = 79 (32.9 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 22/72 (30%), Positives = 38/72 (52%)
Query: 14 KITNYLLSPPQYMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SAL 71
K +LL Q + V S +++ P A+++APTREL QI A++F+ + +
Sbjct: 327 KTAAFLLPILQRFMTDGVAASKFSEIQE---PEAIIVAPTRELINQIYLEARKFAYGTCV 383
Query: 72 RNICIFGGTPKG 83
R + ++GG G
Sbjct: 384 RPVVVYGGINTG 395
>UNIPROTKB|F1NVJ6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322
SMART:SM00490 GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00660000095174 OMA:VLDITHV
EMBL:AADN02002507 EMBL:AADN02002508 IPI:IPI00594090
Ensembl:ENSGALT00000025673 Uniprot:F1NVJ6
Length = 642
Score = 162 (62.1 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 44/128 (34%), Positives = 64/128 (50%)
Query: 105 PAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATD 164
P K I+FV K +DI L + +HGD+ Q DR+ L+DF++GK ILVATD
Sbjct: 483 PKDKAIIFVGKKSTADDIASDLGVQGVPVQSLHGDREQCDREQALDDFKKGKVRILVATD 542
Query: 165 VAARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES 224
+A+RGLDV D+ V NI + + V + R + TLIT++
Sbjct: 543 LASRGLDVHDITHV----FNFDFPRNIEEYVHRVGRTGRAGRTGKAV------TLITKKD 592
Query: 225 SSTLSEMV 232
SE++
Sbjct: 593 WKAASELI 600
Score = 116 (45.9 bits), Expect = 2.0e-18, Sum P(2) = 2.0e-18
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 25 YMLPAAVHISHQE-PVKQGDGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIFGGTPK 82
Y++P +H++ Q P + GP LVLAPTRELA Q++ +++ ++ICI+GG +
Sbjct: 294 YLMPGFIHLASQPIPKDKRGGPGMLVLAPTRELALQVEAECLKYTYKGFKSICIYGGGDR 353
Query: 83 GPQ 85
Q
Sbjct: 354 KAQ 356
Score = 48 (22.0 bits), Expect = 4.9e-05, Sum P(2) = 4.9e-05
Identities = 11/31 (35%), Positives = 20/31 (64%)
Query: 178 VNIGSLQLSANHNISQVIEVVQDYEKEKRLF 208
V +G+L L+A + + Q + V+ E+EK+ F
Sbjct: 445 VYVGTLDLAAVNTVEQKVIVIN--EEEKKAF 473
>GENEDB_PFALCIPARUM|PFL1310c [details] [associations]
symbol:PFL1310c "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0016070 "RNA
metabolic process" evidence=ISS] [GO:0003723 "RNA binding"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014188 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_001350668.1
ProteinModelPortal:Q8I5E7 PRIDE:Q8I5E7
EnsemblProtists:PFL1310c:mRNA GeneID:811314 KEGG:pfa:PFL1310c
EuPathDB:PlasmoDB:PF3D7_1227100 ProtClustDB:CLSZ2500975
Uniprot:Q8I5E7
Length = 742
Score = 184 (69.8 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 30/71 (42%), Positives = 56/71 (78%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K+++F +TK+ +++ + LR +++A+ IHGDK Q++RD +LN+++ + ILVATDVA+
Sbjct: 602 KILIFCDTKRNCDNLCKELRYHQYNALSIHGDKQQRERDRILNNYKTDRCNILVATDVAS 661
Query: 168 RGLDVEDVNTV 178
RGLD+++++ V
Sbjct: 662 RGLDIKNISVV 672
Score = 74 (31.1 bits), Expect = 2.1e-18, Sum P(2) = 2.1e-18
Identities = 15/37 (40%), Positives = 22/37 (59%)
Query: 48 LVLAPTRELAQQIQTVAKEFSSAL--RNICIFGGTPK 82
L+L PTREL Q+ K F L +++ ++GG PK
Sbjct: 431 LILLPTRELCLQVLDEIKSFEKNLPIKSVAVYGGVPK 467
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 145 (56.1 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 28/58 (48%), Positives = 40/58 (68%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSS--ALRNICIFGGT 80
++LP HI Q PV + +GP+A+++ PTRELA QI K+FS ALR +C++GGT
Sbjct: 411 FLLPMFRHILDQRPVGEAEGPLAVIMTPTRELALQITKECKKFSKSLALRVVCVYGGT 468
Score = 145 (56.1 bits), Expect = 3.2e-18, Sum P(2) = 3.2e-18
Identities = 27/67 (40%), Positives = 44/67 (65%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
VI+FV+ ++ + + + L + + + +HG Q DRD ++NDF+ G +LVAT VAAR
Sbjct: 607 VIIFVDKQEHADGLLKDLMKASYPCMSLHGGIDQYDRDSIINDFKNGACRLLVATSVAAR 666
Query: 169 GLDVEDV 175
GLDV+ +
Sbjct: 667 GLDVKQL 673
Score = 42 (19.8 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 12/52 (23%), Positives = 24/52 (46%)
Query: 110 IVFVETKKKVEDITRALRR-ERHSAICIHGDKTQQDRDYVLNDFRQGKAPIL 160
++ +E +KK + L + ++ I DK Q+ D +L D + P +
Sbjct: 582 VIVIEEEKKFLKLLEILGHYQEKGSVIIFVDK-QEHADGLLKDLMKASYPCM 632
>UNIPROTKB|E1BII7 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:DAAA02025231 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:DAAA02025227 EMBL:DAAA02025228
EMBL:DAAA02025229 EMBL:DAAA02025230 IPI:IPI00712097
Ensembl:ENSBTAT00000029077 OMA:ANQNIPE Uniprot:E1BII7
Length = 647
Score = 156 (60.0 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 33/75 (44%), Positives = 46/75 (61%)
Query: 104 NPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVAT 163
+P KVI+FV K + ++ L R S +HG++ Q DR+ L F+ GK IL+AT
Sbjct: 484 SPKDKVIIFVSRKAVADHLSSDLGIRRISVESLHGNREQSDRERALKSFKTGKVRILIAT 543
Query: 164 DVAARGLDVEDVNTV 178
D+A+RGLDV DV V
Sbjct: 544 DLASRGLDVHDVTHV 558
Score = 123 (48.4 bits), Expect = 4.3e-18, Sum P(2) = 4.3e-18
Identities = 28/64 (43%), Positives = 39/64 (60%)
Query: 25 YMLPAAVHISHQEPVKQG--DGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIFGGTP 81
Y++P +HI Q PV Q +GP LVL PTRELA Q+ E+S L+++CI+GG
Sbjct: 295 YLMPGFIHIDSQ-PVLQRARNGPGMLVLTPTRELALQVDAECSEYSYRGLKSVCIYGGGD 353
Query: 82 KGPQ 85
+ Q
Sbjct: 354 RDGQ 357
Score = 42 (19.8 bits), Expect = 3.0e-05, Sum P(2) = 3.0e-05
Identities = 19/69 (27%), Positives = 33/69 (47%)
Query: 148 VLNDFRQGKAPILV-AT-DVAARGLD---VEDVNTVNIGSLQLSANHNISQVIEVVQDYE 202
+L D R + ++ AT A R L +++ V +G+L L A ++Q I V + E
Sbjct: 412 ILLDVRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVTQNIIVTTEDE 471
Query: 203 KEKRLFSLI 211
K + + I
Sbjct: 472 KRSHIQAFI 480
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 147 (56.8 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 30/72 (41%), Positives = 46/72 (63%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV K E ++ L + ++ + +HGD Q DR+ V+ F++ + ILVATDVAAR
Sbjct: 517 VLIFVTKKVDAETVSNNLLIKEYNCLLLHGDMDQADRNKVITQFKRKECDILVATDVAAR 576
Query: 169 GLDVEDV-NTVN 179
GLD+ + N VN
Sbjct: 577 GLDIPHIRNVVN 588
Score = 138 (53.6 bits), Expect = 4.6e-18, Sum P(2) = 4.6e-18
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
++ P +H+ Q+ +K GDGPI L+LAPTREL+ QI AK+F L +C +GG K
Sbjct: 323 FIWPMLMHVMDQKQLKPGDGPIGLILAPTRELSLQIYNEAKKFGKVYNLNVVCCYGGGSK 382
Query: 83 GPQ 85
Q
Sbjct: 383 WEQ 385
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 168 (64.2 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L A IHGD++QQ+R+ L F+ G+ PILVATDVAARG
Sbjct: 409 LVFVETKKGADSLENWLCINGFPATTIHGDRSQQEREVALRSFKTGRTPILVATDVAARG 468
Query: 170 LDVEDV-NTVN 179
LD+ V + VN
Sbjct: 469 LDIPHVAHVVN 479
Score = 98 (39.6 bits), Expect = 5.4e-18, Sum P(2) = 5.4e-18
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 32 HISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
HI V+ G P+A++L+PTRELA QI A++FS + ++ + +GGTP Q
Sbjct: 213 HIERPRGVR-GVYPLAVILSPTRELACQIHDEARKFSYQTGVKVVVAYGGTPVNQQ 267
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 168 (64.2 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 36/71 (50%), Positives = 47/71 (66%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETK+ + + L A IHGD+TQQ+R+ L F+ G+ PILVATDVAARG
Sbjct: 422 LVFVETKRGADSLENWLCINGFPATSIHGDRTQQEREVALKAFKSGRTPILVATDVAARG 481
Query: 170 LDVEDV-NTVN 179
LD+ V + VN
Sbjct: 482 LDIPHVAHVVN 492
Score = 97 (39.2 bits), Expect = 6.4e-18, Sum P(2) = 6.4e-18
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
P+A++L+PTRELA QI AK+FS + ++ + +GGTP Q
Sbjct: 238 PLAVILSPTRELASQIHDEAKKFSYQTGVKVVVAYGGTPINQQ 280
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 171 (65.3 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 34/69 (49%), Positives = 48/69 (69%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++FVETK+ + ++ L +R A IHGD+TQ++R+ L FR G+ PILVAT VAARG
Sbjct: 450 LIFVETKRMADALSEFLINQRFPATAIHGDRTQRERERALEMFRSGRYPILVATAVAARG 509
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 510 LDIPNVTHV 518
Score = 81 (33.6 bits), Expect = 7.1e-18, Sum P(2) = 7.1e-18
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
P +L+LAPTREL QI A++F+ S +R ++GG G Q
Sbjct: 272 PTSLILAPTRELVSQIFDEARKFAYRSWVRPCVVYGGADIGSQ 314
>UNIPROTKB|F1NQ09 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 EMBL:AADN02002507 EMBL:AADN02002508
IPI:IPI00819782 ProteinModelPortal:F1NQ09
Ensembl:ENSGALT00000037063 Uniprot:F1NQ09
Length = 451
Score = 156 (60.0 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 46/148 (31%), Positives = 71/148 (47%)
Query: 88 LPLHRFVFNCQYEMAKNPAF---KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQD 144
L + +F +Y +F V+VFV+ +DI L + +HGD+ Q D
Sbjct: 276 LQFDKDIFTWKYMQVNAQSFCTDVVVVFVQLHVVADDIASDLGVQGVPVQSLHGDREQCD 335
Query: 145 RDYVLNDFRQGKAPILVATDVAARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKE 204
R+ L+DF++GK ILVATD+A+RGLDV D+ V NI + + V +
Sbjct: 336 REQALDDFKKGKVRILVATDLASRGLDVHDITHV----FNFDFPRNIEEYVHRVGRTGRA 391
Query: 205 KRLFSLIRELGKYTLITQESSSTLSEMV 232
R + TLIT++ SE++
Sbjct: 392 GRTGKAV------TLITKKDWKAASELI 413
Score = 116 (45.9 bits), Expect = 7.2e-18, Sum P(2) = 7.2e-18
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 25 YMLPAAVHISHQE-PVKQGDGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIFGGTPK 82
Y++P +H++ Q P + GP LVLAPTRELA Q++ +++ ++ICI+GG +
Sbjct: 107 YLMPGFIHLASQPIPKDKRGGPGMLVLAPTRELALQVEAECLKYTYKGFKSICIYGGGDR 166
Query: 83 GPQ 85
Q
Sbjct: 167 KAQ 169
Score = 39 (18.8 bits), Expect = 0.00015, Sum P(2) = 0.00015
Identities = 10/44 (22%), Positives = 22/44 (50%)
Query: 164 DVAARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRL 207
+V +G+D+ + LQ++ N+ + +V D E ++ L
Sbjct: 171 NVVTKGVDIVIATPGRLNDLQMNNFINLKSITYLVLD-EADRML 213
>UNIPROTKB|J3QRQ7 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2746
ChiTaRS:DDX5 Ensembl:ENST00000577922 Uniprot:J3QRQ7
Length = 212
Score = 213 (80.0 bits), Expect = 2.0e-17, P = 2.0e-17
Identities = 41/63 (65%), Positives = 51/63 (80%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
Y+LPA VHI+HQ +++GDGPI LVLAPTRELAQQ+Q VA E+ A L++ CI+GG PK
Sbjct: 148 YLLPAIVHINHQPFLERGDGPICLVLAPTRELAQQVQQVAAEYCRACRLKSTCIYGGAPK 207
Query: 83 GPQ 85
GPQ
Sbjct: 208 GPQ 210
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 146 (56.5 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 41/125 (32%), Positives = 63/125 (50%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V+VF K V++I L +HGDK Q R L F+ G +L+ATDVAAR
Sbjct: 476 VLVFASKKATVDEIEAQLTLNSFKVAALHGDKDQASRMETLQKFKSGVHHVLIATDVAAR 535
Query: 169 GLDVEDVNTVNIGSLQLSANHNISQVIEV-VQDYEKEKRLFSLIRELGKYTLITQESSST 227
GLD++ + TV N++I++ +++ V + R R+ YTL+TQ +
Sbjct: 536 GLDIKSLKTV--------VNYDIAKDMDMHVHRIGRTGRAGD--RDGVAYTLVTQREARF 585
Query: 228 LSEMV 232
E+V
Sbjct: 586 AGELV 590
Score = 131 (51.2 bits), Expect = 3.2e-17, Sum P(2) = 3.2e-17
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPK 82
++LP VHI Q +++ +GPI ++ APTRELA QI AK+FS A LR ++GG K
Sbjct: 282 FVLPMIVHIMDQPELQRDEGPIGVICAPTRELAHQIFLEAKKFSKAYGLRVSAVYGGMSK 341
Query: 83 GPQ 85
Q
Sbjct: 342 HEQ 344
Score = 46 (21.3 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 172 VEDVNTVNIGSLQLSANHNISQVIEVV-QDYEK 203
+ D V +G + + AN +I+QV+ V+ D EK
Sbjct: 428 LSDPIRVTVGEVGM-ANEDITQVVNVIPSDAEK 459
>SGD|S000003046 [details] [associations]
symbol:DBP3 "RNA-Dependent ATPase, member of DExD/H-box
family" species:4932 "Saccharomyces cerevisiae" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0030687 "preribosome, large
subunit precursor" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0000464
"endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000003046 GO:GO:0005524
GO:GO:0005730 EMBL:BK006941 GO:GO:0003723 GO:GO:0030687
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S EMBL:M80437
EMBL:Z72600 PIR:S30805 RefSeq:NP_011437.3 RefSeq:NP_011442.3
ProteinModelPortal:P20447 SMR:P20447 DIP:DIP-2668N IntAct:P20447
MINT:MINT-1164200 STRING:P20447 PaxDb:P20447 PeptideAtlas:P20447
EnsemblFungi:YGL078C GeneID:852802 GeneID:852806 KEGG:sce:YGL073W
KEGG:sce:YGL078C CYGD:YGL078c GeneTree:ENSGT00680000100003
KO:K09419 OMA:EEEWPEK NextBio:972321 Genevestigator:P20447
GermOnline:YGL078C GO:GO:0000464 Uniprot:P20447
Length = 523
Score = 169 (64.5 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
KV++F KK+ + R L+ ++ IHGD +QQ R LN+F+ GK+ +L+ATDVAA
Sbjct: 361 KVLIFALYKKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAA 420
Query: 168 RGLDVEDVNTV 178
RGLD+ +V TV
Sbjct: 421 RGLDIPNVKTV 431
Score = 81 (33.6 bits), Expect = 4.6e-17, Sum P(2) = 4.6e-17
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 27 LPAAVHISHQEPVKQGDGPIALVLAPTRELAQQI--QTVAKEFSSALRNICIFGGTPKGP 84
+PA H+ + + + G LV++PTRELA QI + ++ C++GG PK
Sbjct: 168 VPAISHLMNDQKKR---GIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDE 224
Query: 85 Q 85
Q
Sbjct: 225 Q 225
Score = 76 (31.8 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 178 VNIGSL-QLSANHNISQVIEVVQDYEKEKRLFSLIRE 213
V+IG+ QL+AN I+Q++EVV KE++L L+++
Sbjct: 315 VSIGNTDQLTANKRITQIVEVVDPRGKERKLLELLKK 351
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 147 (56.8 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 42/128 (32%), Positives = 66/128 (51%)
Query: 106 AFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDV 165
A +IVFV+ ++ + + R L + + + +HG Q DRD + DF+ GK +L+AT V
Sbjct: 757 AGSIIVFVDKQENADILLRDLMKASYPCMSLHGGIDQFDRDSTIIDFKSGKVRLLIATSV 816
Query: 166 AARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDY-EKEKRLFSLIRELGKYTLITQES 224
AARGLDV+D L L N+++ E DY + R ++ YT IT E
Sbjct: 817 AARGLDVKD--------LILVVNYDVPNHYE---DYVHRCGRTGRAGKKGSAYTFITPEQ 865
Query: 225 SSTLSEMV 232
S +++
Sbjct: 866 SRYAGDII 873
Score = 132 (51.5 bits), Expect = 5.7e-17, Sum P(2) = 5.7e-17
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGGT 80
++LP HI Q ++ GDG IA+++APTREL QI ++FS +L R +C++GGT
Sbjct: 564 FILPMFRHILDQPSMEDGDGAIAIIMAPTRELCMQIGKDIRKFSKSLGLRPVCVYGGT 621
>WB|WBGene00002083 [details] [associations]
symbol:inf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0040011
GO:GO:0000003 GO:GO:0019915 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:FO081266 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ
EMBL:Z12116 PIR:S26281 RefSeq:NP_001022623.1 RefSeq:NP_001022624.1
UniGene:Cel.6803 ProteinModelPortal:P27639 SMR:P27639
DIP:DIP-27102N IntAct:P27639 MINT:MINT-1112147 STRING:P27639
PaxDb:P27639 PRIDE:P27639 EnsemblMetazoa:F57B9.6a.1
EnsemblMetazoa:F57B9.6a.2 GeneID:175966 KEGG:cel:CELE_F57B9.6
UCSC:F57B9.6a.1 CTD:175966 WormBase:F57B9.6a WormBase:F57B9.6b
InParanoid:P27639 NextBio:890522 Uniprot:P27639
Length = 402
Score = 164 (62.8 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 25/71 (35%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F T++KV+ +T + + + C+HGD Q +RD ++ +FR G + +L+ TD+ A
Sbjct: 270 QAVIFCNTRRKVDTLTEKMTENQFTVSCLHGDMDQAERDTIMREFRSGSSRVLITTDILA 329
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 330 RGIDVQQVSLV 340
Score = 87 (35.7 bits), Expect = 1.4e-16, Sum P(2) = 1.4e-16
Identities = 27/51 (52%), Positives = 30/51 (58%)
Query: 33 ISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALR-NI--CIFGGT 80
I H++P Q ALV+APTRELAQQIQ V L NI CI GGT
Sbjct: 91 IDHEDPHVQ-----ALVMAPTRELAQQIQKVMSALGEYLNVNILPCI-GGT 135
>TAIR|locus:2087852 [details] [associations]
symbol:PMH2 "putative mitochondrial RNA helicase 2"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0000373 "Group II intron splicing"
evidence=IMP] [GO:0009409 "response to cold" evidence=IEP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005524
GO:GO:0005618 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0043234
GO:GO:0005730 GO:GO:0009409 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0000373 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AY062502 EMBL:AY093256 IPI:IPI00524382 RefSeq:NP_188872.2
UniGene:At.27322 ProteinModelPortal:Q9LUW5 SMR:Q9LUW5 STRING:Q9LUW5
PaxDb:Q9LUW5 PRIDE:Q9LUW5 EnsemblPlants:AT3G22330.1 GeneID:821802
KEGG:ath:AT3G22330 GeneFarm:1033 TAIR:At3g22330
HOGENOM:HOG000268800 InParanoid:Q9LUW5 OMA:HGRGRNP PhylomeDB:Q9LUW5
ProtClustDB:CLSN2684125 Genevestigator:Q9LUW5 GermOnline:AT3G22330
Uniprot:Q9LUW5
Length = 616
Score = 145 (56.1 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 33/71 (46%), Positives = 44/71 (61%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVF +TK+ + ++ AL R +HGD +Q R+ L FR G ILVATDVAA
Sbjct: 351 KCIVFTQTKRDADRLSYALARS-FKCEALHGDISQSQRERTLAGFRDGHFNILVATDVAA 409
Query: 168 RGLDVEDVNTV 178
RGLDV +V+ +
Sbjct: 410 RGLDVPNVDLI 420
Score = 123 (48.4 bits), Expect = 1.6e-16, Sum P(2) = 1.6e-16
Identities = 23/45 (51%), Positives = 33/45 (73%)
Query: 41 QGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGTPKGPQ 85
+G P+ LVLAPTRELA+Q++ +E + +L IC++GGTP G Q
Sbjct: 175 RGRNPLCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQ 219
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 158 (60.7 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 34/88 (38%), Positives = 52/88 (59%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
+IVFV K+ + I R +++ S++ +HG KTQ+ R+ L R G +LVATD+A R
Sbjct: 624 IIVFVNIKRNCDAIAREIKQWGFSSVTLHGSKTQEQREAALASVRNGSTDVLVATDLAGR 683
Query: 169 GLDVEDVNTV---NIGSLQLSANHNISQ 193
G+DV DV+ V N+ + S H I +
Sbjct: 684 GIDVPDVSLVINFNMATSIESYTHRIGR 711
Score = 106 (42.4 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 25 YMLPAAVHISHQEPV-----KQGDGPIALVLAPTRELAQQIQTVAKEFSSALR-NIC-IF 77
++LP +I+ + ++ DGP A+VLAPTRELAQQI+ AK+F+ L N+ I
Sbjct: 400 FLLPLLCYIAELPRIDEFEWRKNDGPYAIVLAPTRELAQQIEIEAKKFTEPLGFNVVSIV 459
Query: 78 GG 79
GG
Sbjct: 460 GG 461
>UNIPROTKB|Q9NXZ2 [details] [associations]
symbol:DDX43 "Probable ATP-dependent RNA helicase DDX43"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 EMBL:AJ278110 EMBL:AL136751 EMBL:BC066938
IPI:IPI00032899 RefSeq:NP_061135.2 UniGene:Hs.125507
ProteinModelPortal:Q9NXZ2 SMR:Q9NXZ2 STRING:Q9NXZ2
PhosphoSite:Q9NXZ2 DMDM:145559466 PRIDE:Q9NXZ2 DNASU:55510
Ensembl:ENST00000370336 GeneID:55510 KEGG:hsa:55510 UCSC:uc003pgw.3
CTD:55510 GeneCards:GC06P074161 HGNC:HGNC:18677 HPA:HPA031380
HPA:HPA031381 MIM:606286 neXtProt:NX_Q9NXZ2 PharmGKB:PA134988734
InParanoid:Q9NXZ2 OMA:VLDITHV OrthoDB:EOG43BMNQ PhylomeDB:Q9NXZ2
ChiTaRS:DDX43 GenomeRNAi:55510 NextBio:59918 ArrayExpress:Q9NXZ2
Bgee:Q9NXZ2 CleanEx:HS_DDX43 Genevestigator:Q9NXZ2
GermOnline:ENSG00000080007 Uniprot:Q9NXZ2
Length = 648
Score = 153 (58.9 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 33/71 (46%), Positives = 45/71 (63%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
KVIVFV K + ++ L S +HGD+ Q+DR+ L +F+ GK IL+ATD+A+
Sbjct: 489 KVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRILIATDLAS 548
Query: 168 RGLDVEDVNTV 178
RGLDV DV V
Sbjct: 549 RGLDVHDVTHV 559
Score = 111 (44.1 bits), Expect = 2.3e-16, Sum P(2) = 2.3e-16
Identities = 24/63 (38%), Positives = 39/63 (61%)
Query: 25 YMLPAAVHISHQEPVK-QGDGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIFGGTPK 82
Y++P +H+ Q +K Q + P LVL PTRELA Q++ ++S LR++C++GG +
Sbjct: 296 YLMPGFIHLVLQPSLKGQRNRPGMLVLTPTRELALQVEGECCKYSYKGLRSVCVYGGGNR 355
Query: 83 GPQ 85
Q
Sbjct: 356 DEQ 358
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 166 (63.5 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++FV TKKK + I L +E+ S+ IHGD+ Q R+ L DFR GK ++V T VAA
Sbjct: 528 RTMIFVNTKKKADFIAGYLCQEKFSSTSIHGDREQYQRESALWDFRTGKCTVIVCTAVAA 587
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 588 RGLDIENVQHV 598
Score = 86 (35.3 bits), Expect = 3.8e-16, Sum P(2) = 3.8e-16
Identities = 22/68 (32%), Positives = 38/68 (55%)
Query: 14 KITNYLLSPPQYMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SAL 71
K +LL YM+ + S +++ P A+++APTREL QI A++FS + +
Sbjct: 324 KTAAFLLPILSYMMNEGITASQYLQLQE---PEAIIIAPTRELINQIYLDARKFSYGTCV 380
Query: 72 RNICIFGG 79
R + ++GG
Sbjct: 381 RPVVVYGG 388
>UNIPROTKB|F1S0I6 [details] [associations]
symbol:DDX43 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 GO:GO:0005524 GO:GO:0003723
GO:GO:0005622 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00660000095174 OMA:VLDITHV EMBL:CU468562
EMBL:AEMK01095428 EMBL:AEMK01188208 EMBL:FP312832
Ensembl:ENSSSCT00000004740 Uniprot:F1S0I6
Length = 650
Score = 150 (57.9 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 32/75 (42%), Positives = 46/75 (61%)
Query: 104 NPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVAT 163
+P KVI+FV K + ++ L S +HG++ Q DR+ L +F+ GK IL+AT
Sbjct: 487 SPKDKVIIFVSRKAVADHLSSDLGIRHISVESLHGNREQGDRERALKNFKTGKVRILIAT 546
Query: 164 DVAARGLDVEDVNTV 178
D+A+RGLDV DV V
Sbjct: 547 DLASRGLDVHDVTHV 561
Score = 113 (44.8 bits), Expect = 4.0e-16, Sum P(2) = 4.0e-16
Identities = 23/66 (34%), Positives = 39/66 (59%)
Query: 25 YMLPAAVHISHQEPV----KQGDGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIFGG 79
Y++P +H+ Q V + +GP LVL PTRELA Q++ ++S L+++C++GG
Sbjct: 295 YLMPGFIHVDSQPVVFSLQRARNGPGMLVLTPTRELALQVEAECSKYSYKGLKSVCVYGG 354
Query: 80 TPKGPQ 85
+ Q
Sbjct: 355 GDRDGQ 360
Score = 44 (20.5 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 19/72 (26%), Positives = 33/72 (45%)
Query: 148 VLNDFRQGKAPILV-AT-DVAARGLD---VEDVNTVNIGSLQLSANHNISQVIEVVQDYE 202
+L D R + ++ AT A R L +++ V +G+L L A + Q I V + E
Sbjct: 415 ILLDIRPDRQTVMTSATWPYAVRRLAQSYLKEPMIVYVGTLDLVAVSTVKQNIIVTTEDE 474
Query: 203 KEKRLFSLIREL 214
K + + I +
Sbjct: 475 KRSHIQTFIESM 486
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 137 (53.3 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGGTP 81
++LP HI Q P+K G+GPIA+++ PTRELA QI K F L R C +GG P
Sbjct: 472 FLLPMFRHIKDQRPLKTGEGPIAIIMTPTRELAVQIFRECKPFLKLLNIRACCAYGGAP 530
Score = 134 (52.2 bits), Expect = 5.1e-16, Sum P(2) = 5.1e-16
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFV+ ++ + + L + +++ IHG K Q DRD ++D++ G +L+AT V A
Sbjct: 670 RTLVFVDRQESADALLSDLMKRGYTSNSIHGGKDQHDRDSTISDYKAGVFDVLIATSVVA 729
Query: 168 RGLDVEDVNTV 178
RGLDV+ + V
Sbjct: 730 RGLDVKSLQLV 740
Score = 51 (23.0 bits), Expect = 2.0e-07, Sum P(2) = 2.0e-07
Identities = 18/73 (24%), Positives = 35/73 (47%)
Query: 148 VLNDFRQGKAPILV------ATDVAARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDY 201
++N+ R + +L A + AR + + V + +G + A+ + Q++EV +
Sbjct: 592 IINNIRPDRQTVLFSATFPRAMEALARKVLKKPVE-ITVGGRSVVASE-VEQIVEVRPEE 649
Query: 202 EKEKRLFSLIREL 214
K RL L+ EL
Sbjct: 650 SKFSRLLELLGEL 662
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 142 (55.0 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 110 IVFVETKKKVEDITRALRRERHSAIC-IHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
IVFV+ ++K +DI L R ++++ +HG Q DRD + DF+ G +LVAT VAAR
Sbjct: 555 IVFVDKQEKADDIVDQLMRTGYNSVAPLHGGIDQHDRDSSIADFKTGVIKVLVATSVAAR 614
Query: 169 GLDVEDV 175
GLDV+++
Sbjct: 615 GLDVKNL 621
Score = 127 (49.8 bits), Expect = 5.3e-16, Sum P(2) = 5.3e-16
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSS--ALRNICIFGG 79
++LP HI Q +++GDGPIA++LAPTRELA Q A +F+ L+ C +GG
Sbjct: 358 FLLPMFRHILDQPELEEGDGPIAVILAPTRELAMQTYKEANKFAKPLGLKVACTYGG 414
>GENEDB_PFALCIPARUM|PF14_0655 [details] [associations]
symbol:PF14_0655 "RNA helicase-1, putative"
species:5833 "Plasmodium falciparum" [GO:0003729 "mRNA binding"
evidence=ISS] [GO:0003743 "translation initiation factor activity"
evidence=ISS] [GO:0000339 "RNA cap binding" evidence=ISS]
[GO:0006446 "regulation of translational initiation" evidence=ISS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 165 (63.1 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 28/69 (40%), Positives = 46/69 (66%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
I++ T+KKV+ +T+ + + C+HGD Q+DRD ++ +FR G +LV TD+ ARG
Sbjct: 266 IIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARG 325
Query: 170 LDVEDVNTV 178
+DV+ V+ V
Sbjct: 326 IDVQQVSLV 334
Score = 79 (32.9 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 20/36 (55%), Positives = 22/36 (61%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALRNIC--IFGGT 80
AL+LAPTRELAQQIQ V L+ C GGT
Sbjct: 94 ALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGT 129
>UNIPROTKB|Q8IKF0 [details] [associations]
symbol:H45 "Helicase 45" species:36329 "Plasmodium
falciparum 3D7" [GO:0006446 "regulation of translational
initiation" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006446
GO:GO:0003676 EMBL:AE014187 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GenomeReviews:AE014187_GR KO:K03257 OMA:TENDARQ
RefSeq:XP_001348829.1 ProteinModelPortal:Q8IKF0 SMR:Q8IKF0
IntAct:Q8IKF0 MINT:MINT-1575859 EnsemblProtists:PF14_0655:mRNA
GeneID:812237 KEGG:pfa:PF14_0655 EuPathDB:PlasmoDB:PF3D7_1468700
ProtClustDB:PTZ00424 Uniprot:Q8IKF0
Length = 398
Score = 165 (63.1 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 28/69 (40%), Positives = 46/69 (66%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
I++ T+KKV+ +T+ + + C+HGD Q+DRD ++ +FR G +LV TD+ ARG
Sbjct: 266 IIYCNTRKKVDILTQEMHNRLFTVSCMHGDMDQKDRDLIMREFRSGSTRVLVTTDLLARG 325
Query: 170 LDVEDVNTV 178
+DV+ V+ V
Sbjct: 326 IDVQQVSLV 334
Score = 79 (32.9 bits), Expect = 6.0e-16, Sum P(2) = 6.0e-16
Identities = 20/36 (55%), Positives = 22/36 (61%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALRNIC--IFGGT 80
AL+LAPTRELAQQIQ V L+ C GGT
Sbjct: 94 ALILAPTRELAQQIQKVVLALGDYLKVKCHACVGGT 129
>CGD|CAL0005725 [details] [associations]
symbol:PRP5 species:5476 "Candida albicans" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 149 (57.5 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 34/91 (37%), Positives = 51/91 (56%)
Query: 90 LHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVL 149
LH + N Q E +P K++VF E + +++ L ++ AI IHG K Q DR Y +
Sbjct: 541 LHDILTNYQIE---HPDSKILVFTEKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAI 597
Query: 150 NDFRQGKAPI--LVATDVAARGLDVEDVNTV 178
+F + I L+AT +AARGLDV ++ V
Sbjct: 598 KEFASMDSGINILIATSIAARGLDVRNLGLV 628
Score = 115 (45.5 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNI---CIFGGT 80
Y+LP HI Q+ K GPI L+L+PTRELA QI+ F+ N+ C +GG+
Sbjct: 348 YVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGS 406
>UNIPROTKB|Q5ADL0 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:237561 "Candida albicans SC5314" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0005725 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000029
EMBL:AACQ01000028 KO:K12811 RefSeq:XP_719806.1 RefSeq:XP_719923.1
ProteinModelPortal:Q5ADL0 GeneID:3638447 GeneID:3638635
KEGG:cal:CaO19.14123 KEGG:cal:CaO19.6831 Uniprot:Q5ADL0
Length = 884
Score = 149 (57.5 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 34/91 (37%), Positives = 51/91 (56%)
Query: 90 LHRFVFNCQYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVL 149
LH + N Q E +P K++VF E + +++ L ++ AI IHG K Q DR Y +
Sbjct: 541 LHDILTNYQIE---HPDSKILVFTEKQNDADELVANLLSNKYPAIAIHGGKDQMDRKYAI 597
Query: 150 NDFRQGKAPI--LVATDVAARGLDVEDVNTV 178
+F + I L+AT +AARGLDV ++ V
Sbjct: 598 KEFASMDSGINILIATSIAARGLDVRNLGLV 628
Score = 115 (45.5 bits), Expect = 8.2e-16, Sum P(2) = 8.2e-16
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNI---CIFGGT 80
Y+LP HI Q+ K GPI L+L+PTRELA QI+ F+ N+ C +GG+
Sbjct: 348 YVLPMLRHIQDQQFSKDNQGPIGLILSPTRELALQIEKEILNFTKRNNNLRVCCCYGGS 406
>UNIPROTKB|Q86TM3 [details] [associations]
symbol:DDX53 "Probable ATP-dependent RNA helicase DDX53"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ EMBL:AY039237 EMBL:BC051703
EMBL:BC067878 IPI:IPI00328813 PIR:JC7831 RefSeq:NP_874358.2
UniGene:Hs.434416 PDB:3IUY PDBsum:3IUY ProteinModelPortal:Q86TM3
SMR:Q86TM3 STRING:Q86TM3 PhosphoSite:Q86TM3 DMDM:143811384
PaxDb:Q86TM3 PRIDE:Q86TM3 Ensembl:ENST00000327968 GeneID:168400
KEGG:hsa:168400 UCSC:uc004daj.3 CTD:168400 GeneCards:GC0XP023018
HGNC:HGNC:20083 HPA:HPA003186 neXtProt:NX_Q86TM3
PharmGKB:PA134863598 InParanoid:Q86TM3 OMA:GLKSICI
EvolutionaryTrace:Q86TM3 GenomeRNAi:168400 NextBio:88718
Bgee:Q86TM3 CleanEx:HS_DDX53 Genevestigator:Q86TM3
GermOnline:ENSG00000184735 Uniprot:Q86TM3
Length = 631
Score = 143 (55.4 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 40/130 (30%), Positives = 63/130 (48%)
Query: 104 NPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVAT 163
+P KVI+FV K +D++ + SA +HG+ Q D++ + DF+ G IL+ T
Sbjct: 465 SPNDKVIMFVSQKHIADDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITT 524
Query: 164 DVAARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELG-KYTLITQ 222
D+ +RGLD+ DV V N++ + I+V Y + G TLITQ
Sbjct: 525 DIVSRGLDLNDVTHVY--------NYDFPRNIDV---YVHRVGYIGRTGKTGTSVTLITQ 573
Query: 223 ESSSTLSEMV 232
S E++
Sbjct: 574 RDSKMAGELI 583
Score = 119 (46.9 bits), Expect = 8.7e-16, Sum P(2) = 8.7e-16
Identities = 25/64 (39%), Positives = 40/64 (62%)
Query: 25 YMLPAAVHISHQEPV--KQGDGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIFGGTP 81
Y++P +H+ Q P+ +Q +GP LVL PTRELA ++ ++S L++ICI+GG
Sbjct: 276 YLMPGFIHLDSQ-PISREQRNGPGMLVLTPTRELALHVEAECSKYSYKGLKSICIYGGRN 334
Query: 82 KGPQ 85
+ Q
Sbjct: 335 RNGQ 338
Score = 46 (21.3 bits), Expect = 3.3e-05, Sum P(2) = 3.3e-05
Identities = 14/35 (40%), Positives = 20/35 (57%)
Query: 172 VEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKR 206
++D V +G+L L A + + Q I V EKEKR
Sbjct: 422 LKDPMIVYVGNLNLVAVNTVKQNIIVTT--EKEKR 454
Score = 39 (18.8 bits), Expect = 0.00017, Sum P(2) = 0.00017
Identities = 10/41 (24%), Positives = 22/41 (53%)
Query: 167 ARGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRL 207
++G+D+ + LQ++ + N+ + +V D E +K L
Sbjct: 343 SKGVDIIIATPGRLNDLQMNNSVNLRSITYLVID-EADKML 382
>SGD|S000001767 [details] [associations]
symbol:TIF1 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;IMP;IDA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA;IMP;IDA] [GO:0006412 "translation"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP;IDA] [GO:0005840 "ribosome" evidence=TAS] [GO:0016281
"eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000001767
SGD:S000003674 GO:GO:0005524 GO:GO:0005737 EMBL:BK006943
EMBL:BK006944 GO:GO:0003743 EMBL:X87371 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 KO:K03854
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 166 (63.5 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 28/71 (39%), Positives = 50/71 (70%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F T++KVE++T LR ++ + I+ D QQ+RD ++ +FR G + IL++TD+ A
Sbjct: 262 QAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLA 321
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 322 RGIDVQQVSLV 332
Score = 74 (31.1 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 45 PIALVLAPTRELAQQIQTV--AKEFSSALR-NICIFGGT 80
P AL+LAPTRELA QIQ V A F ++ + CI GGT
Sbjct: 91 PQALMLAPTRELALQIQKVVMALAFHMDIKVHACI-GGT 128
>SGD|S000003674 [details] [associations]
symbol:TIF2 "Translation initiation factor eIF4A"
species:4932 "Saccharomyces cerevisiae" [GO:0003743 "translation
initiation factor activity" evidence=IEA;ISS;IDA;TAS] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA;ISS;IDA] [GO:0006446 "regulation of translational
initiation" evidence=ISS] [GO:0005840 "ribosome" evidence=TAS]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IGI;ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IMP] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0006413 "translational initiation"
evidence=IEA;TAS] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000001767 SGD:S000003674 GO:GO:0005524
GO:GO:0005737 EMBL:BK006943 EMBL:BK006944 GO:GO:0003743 EMBL:X87371
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
KO:K03854 eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 EMBL:U25436 KO:K03257
OMA:IKMFILD OrthoDB:EOG4PG98F EMBL:X12813 EMBL:X12814 EMBL:X58099
EMBL:Z49413 EMBL:Z28284 PIR:S05835 RefSeq:NP_012397.1
RefSeq:NP_012985.3 RefSeq:NP_012987.3 PDB:1FUK PDB:1FUU PDB:1QDE
PDB:1QVA PDB:2VSO PDB:2VSX PDBsum:1FUK PDBsum:1FUU PDBsum:1QDE
PDBsum:1QVA PDBsum:2VSO PDBsum:2VSX ProteinModelPortal:P10081
SMR:P10081 DIP:DIP-4571N IntAct:P10081 MINT:MINT-546056
STRING:P10081 SWISS-2DPAGE:P10081 PaxDb:P10081 EnsemblFungi:YJL138C
EnsemblFungi:YKR059W GeneID:853303 GeneID:853933 GeneID:853935
KEGG:sce:YJL138C KEGG:sce:YKR059W KEGG:sce:YKR061W SABIO-RK:P10081
EvolutionaryTrace:P10081 NextBio:973627 Genevestigator:P10081
GermOnline:YJL138C GermOnline:YKR059W Uniprot:P10081
Length = 395
Score = 166 (63.5 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 28/71 (39%), Positives = 50/71 (70%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F T++KVE++T LR ++ + I+ D QQ+RD ++ +FR G + IL++TD+ A
Sbjct: 262 QAVIFCNTRRKVEELTTKLRNDKFTVSAIYSDLPQQERDTIMKEFRSGSSRILISTDLLA 321
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 322 RGIDVQQVSLV 332
Score = 74 (31.1 bits), Expect = 8.9e-16, Sum P(2) = 8.9e-16
Identities = 22/39 (56%), Positives = 26/39 (66%)
Query: 45 PIALVLAPTRELAQQIQTV--AKEFSSALR-NICIFGGT 80
P AL+LAPTRELA QIQ V A F ++ + CI GGT
Sbjct: 91 PQALMLAPTRELALQIQKVVMALAFHMDIKVHACI-GGT 128
>SGD|S000002428 [details] [associations]
symbol:FAL1 "Nucleolar protein required for maturation of 18S
rRNA" species:4932 "Saccharomyces cerevisiae" [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0097078 "FAl1-SGD1 complex" evidence=IPI] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002428 GO:GO:0005524
GO:GO:0005730 EMBL:BK006938 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 EMBL:X95966
EMBL:Z49770 GeneTree:ENSGT00680000100003 GO:GO:0000462 KO:K13025
OrthoDB:EOG4HTD1W EMBL:Z74317 EMBL:AY723767 PIR:S54644
RefSeq:NP_010304.3 RefSeq:NP_010309.3 ProteinModelPortal:Q12099
SMR:Q12099 DIP:DIP-4516N IntAct:Q12099 MINT:MINT-503789
STRING:Q12099 PaxDb:Q12099 PeptideAtlas:Q12099 EnsemblFungi:YDR021W
GeneID:851584 GeneID:851590 KEGG:sce:YDR021W KEGG:sce:YDR026C
CYGD:YDR021w KO:K09424 OMA:IFGKQPF NextBio:969055
Genevestigator:Q12099 GermOnline:YDR021W GO:GO:0097078
Uniprot:Q12099
Length = 399
Score = 169 (64.5 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 30/69 (43%), Positives = 50/69 (72%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++F TKKKV+ +++ L + + + +HGD Q++RD V+NDFR G + +L++TDV ARG
Sbjct: 269 VIFCNTKKKVDWLSQRLIQSNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARG 328
Query: 170 LDVEDVNTV 178
+DV+ V+ V
Sbjct: 329 IDVQQVSLV 337
Score = 64 (27.6 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALRNICIFGGT 80
AL+L+PTRELA QI V K + N+ F T
Sbjct: 94 ALILSPTRELASQIGQVVKNLGDYM-NVNAFAIT 126
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 165 (63.1 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 34/69 (49%), Positives = 44/69 (63%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++FVETKK + + L + H IHGD+TQ++R+ L FR G PILVAT VAARG
Sbjct: 563 LIFVETKKGADSLEEFLYQCNHPVTSIHGDRTQKEREEALRCFRSGDCPILVATAVAARG 622
Query: 170 LDVEDVNTV 178
LD+ V V
Sbjct: 623 LDIPHVKHV 631
Score = 87 (35.7 bits), Expect = 9.1e-16, Sum P(2) = 9.1e-16
Identities = 21/43 (48%), Positives = 27/43 (62%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
P+ LVLAPTRELA QI AK+F+ S +R ++GG Q
Sbjct: 379 PLGLVLAPTRELATQIFEEAKKFAYRSRMRPAVLYGGNNTSEQ 421
>TAIR|locus:504955106 [details] [associations]
symbol:emb1138 "embryo defective 1138" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;IDA] [GO:0009793 "embryo development ending in seed
dormancy" evidence=NAS] [GO:0009570 "chloroplast stroma"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0009941
"chloroplast envelope" evidence=IDA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0009570 GO:GO:0016020 GO:GO:0046872 GO:GO:0008270
GO:GO:0009941 GO:GO:0003723 EMBL:AF058914 Gene3D:4.10.60.10
SUPFAM:SSF57756 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268805 UniGene:At.23875 EMBL:AJ010457 EMBL:AC137518
EMBL:AY080625 EMBL:AY091068 EMBL:AY094485 EMBL:AY123000
EMBL:AY128278 EMBL:BT000713 EMBL:BT002289 EMBL:BT002456
EMBL:AY102126 EMBL:BT004533 EMBL:AK229821 IPI:IPI00523172
IPI:IPI00656967 PIR:T01202 PIR:T51738 RefSeq:NP_001031943.1
RefSeq:NP_680225.2 UniGene:At.66764 ProteinModelPortal:Q8L7S8
SMR:Q8L7S8 STRING:Q8L7S8 PaxDb:Q8L7S8 PRIDE:Q8L7S8
EnsemblPlants:AT5G26742.2 GeneID:832713 KEGG:ath:AT5G26742
GeneFarm:1570 TAIR:At5g26742 InParanoid:Q8L7S8 OMA:ISHEQGW
PhylomeDB:Q8L7S8 ProtClustDB:CLSN2680279 Genevestigator:Q8L7S8
Uniprot:Q8L7S8
Length = 748
Score = 160 (61.4 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVF +TK+ ++++ AL + +HGD +Q R+ LN FRQGK +LVATDVA+
Sbjct: 353 KTIVFTQTKRDADEVSLALSNSIATE-ALHGDISQHQRERTLNAFRQGKFTVLVATDVAS 411
Query: 168 RGLDVEDVNTV 178
RGLD+ +V+ V
Sbjct: 412 RGLDIPNVDLV 422
Score = 96 (38.9 bits), Expect = 9.3e-16, Sum P(2) = 9.3e-16
Identities = 19/40 (47%), Positives = 27/40 (67%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGG 79
+ G P LVLAPTRELA+Q++ KE + L +C++GG
Sbjct: 176 RSGRLPKFLVLAPTRELAKQVEKEIKESAPYLSTVCVYGG 215
>DICTYBASE|DDB_G0275443 [details] [associations]
symbol:helB1 "putative RNA splicing factor"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA;ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0000375 "RNA splicing, via transesterification
reactions" evidence=ISS] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0275443 GO:GO:0005524
GO:GO:0006397 GenomeReviews:CM000151_GR GO:GO:0005681 GO:GO:0003676
EMBL:AAFI02000013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0000375 HSSP:P09052 EMBL:X81823 RefSeq:XP_643509.1
ProteinModelPortal:Q553B1 PRIDE:Q553B1 EnsemblProtists:DDB0191329
GeneID:8620090 KEGG:ddi:DDB_G0275443 KO:K12811 OMA:SVVAPEI
ProtClustDB:CLSZ2500419 Uniprot:Q553B1
Length = 1151
Score = 145 (56.1 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 24/71 (33%), Positives = 46/71 (64%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
++++F ++ +++ R L ++ + +HG K Q DRD ++DF+ IL+AT +A+
Sbjct: 758 QILIFTNRQETTDNLYRQLSNSQYQCLSLHGSKDQTDRDETISDFKNKVKTILIATPLAS 817
Query: 168 RGLDVEDVNTV 178
RGLD++D+N V
Sbjct: 818 RGLDIKDLNLV 828
Score = 122 (48.0 bits), Expect = 1.0e-15, Sum P(2) = 1.0e-15
Identities = 26/57 (45%), Positives = 35/57 (61%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGG 79
++LP HI Q G+G IAL+++PTRELA QI K+FS L R C++GG
Sbjct: 563 FLLPMFRHILAQPKSAPGEGMIALIMSPTRELALQIHVECKKFSKVLGLRTACVYGG 619
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 162 (62.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 31/69 (44%), Positives = 43/69 (62%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++FVETK+ + +T L + CIHGD TQ +R+ L FR P LVATD+A+RG
Sbjct: 508 LIFVETKRSCDTLTYFLNQRNFPTTCIHGDLTQPERENALQSFRSFATPFLVATDIASRG 567
Query: 170 LDVEDVNTV 178
L + +VN V
Sbjct: 568 LHIGNVNLV 576
Score = 91 (37.1 bits), Expect = 1.1e-15, Sum P(2) = 1.1e-15
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGG 79
P ALVLAPTRELAQQI A +FS S + ++ I+GG
Sbjct: 331 PRALVLAPTRELAQQIFDEANKFSYGSPVSSVVIYGG 367
>TAIR|locus:2087832 [details] [associations]
symbol:PMH1 "putative mitochondrial RNA helicase 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003723 "RNA binding" evidence=IDA] [GO:0009409 "response to
cold" evidence=IEP] [GO:0009414 "response to water deprivation"
evidence=IMP] [GO:0009651 "response to salt stress" evidence=IMP]
[GO:0043234 "protein complex" evidence=IDA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0043234 GO:GO:0003677 GO:GO:0009651
GO:GO:0009409 GO:GO:0009414 GO:GO:0003723 EMBL:AB022215
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268800 ProtClustDB:CLSN2684125 EMBL:AY091091
EMBL:AJ010461 IPI:IPI00517476 PIR:T51341 RefSeq:NP_188870.1
UniGene:At.25190 ProteinModelPortal:Q9LUW6 SMR:Q9LUW6 IntAct:Q9LUW6
STRING:Q9LUW6 PaxDb:Q9LUW6 PRIDE:Q9LUW6 EnsemblPlants:AT3G22310.1
GeneID:821800 KEGG:ath:AT3G22310 GeneFarm:922 TAIR:At3g22310
InParanoid:Q9LUW6 OMA:VSQGRQV PhylomeDB:Q9LUW6
Genevestigator:Q9LUW6 GermOnline:AT3G22310 Uniprot:Q9LUW6
Length = 610
Score = 141 (54.7 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K IVF +TK+ + + L + + +HGD +Q R+ L FR G ILVATDVAA
Sbjct: 363 KCIVFTQTKRDADRLAFGLAKS-YKCEALHGDISQAQRERTLAGFRDGNFSILVATDVAA 421
Query: 168 RGLDVEDVNTV 178
RGLDV +V+ V
Sbjct: 422 RGLDVPNVDLV 432
Score = 119 (46.9 bits), Expect = 1.4e-15, Sum P(2) = 1.4e-15
Identities = 23/45 (51%), Positives = 32/45 (71%)
Query: 41 QGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGTPKGPQ 85
+G P LVLAPTRELA+Q++ +E + +L IC++GGTP G Q
Sbjct: 187 RGKNPQCLVLAPTRELARQVEKEFRESAPSLDTICLYGGTPIGQQ 231
>UNIPROTKB|Q8EGU0 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 161 (61.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 101 MAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPIL 160
+ +N +V+VF TK+ E + + L + SA HGDKTQ R+ VL+DF+ GK +L
Sbjct: 236 VGRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVL 295
Query: 161 VATDVAARGLDVE 173
VATDVAARGLD++
Sbjct: 296 VATDVAARGLDIQ 308
Score = 85 (35.0 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 30 AVHISHQEPVKQGDGPI--ALVLAPTRELAQQIQTVAKEFSS--ALRNICIFGGTPKGPQ 85
A+ + Q K D P+ ALV+ PTRELA Q+ +++S L+ + ++GG PQ
Sbjct: 56 ALPVLEQLAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQ 115
>TIGR_CMR|SO_1501 [details] [associations]
symbol:SO_1501 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 HOGENOM:HOG000268807
OMA:GGANMNP RefSeq:NP_717118.1 ProteinModelPortal:Q8EGU0
GeneID:1169311 KEGG:son:SO_1501 PATRIC:23522644
ProtClustDB:CLSK906294 Uniprot:Q8EGU0
Length = 456
Score = 161 (61.7 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 101 MAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPIL 160
+ +N +V+VF TK+ E + + L + SA HGDKTQ R+ VL+DF+ GK +L
Sbjct: 236 VGRNNWRQVLVFASTKECAEHLLQELTLDGISAGVFHGDKTQGARNRVLDDFKAGKLRVL 295
Query: 161 VATDVAARGLDVE 173
VATDVAARGLD++
Sbjct: 296 VATDVAARGLDIQ 308
Score = 85 (35.0 bits), Expect = 1.6e-15, Sum P(2) = 1.6e-15
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 30 AVHISHQEPVKQGDGPI--ALVLAPTRELAQQIQTVAKEFSS--ALRNICIFGGTPKGPQ 85
A+ + Q K D P+ ALV+ PTRELA Q+ +++S L+ + ++GG PQ
Sbjct: 56 ALPVLEQLAAKPADKPLLRALVMTPTRELAIQVCANIQKYSQFLPLKTLAVYGGANMNPQ 115
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 160 (61.4 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 33/69 (47%), Positives = 45/69 (65%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++FVETK+ + +T L + A IHGD+TQ +R+ L FR G A +LVAT VAARG
Sbjct: 403 LIFVETKRMADQLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARG 462
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 463 LDIPNVTHV 471
Score = 90 (36.7 bits), Expect = 2.1e-15, Sum P(2) = 2.1e-15
Identities = 20/43 (46%), Positives = 30/43 (69%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
P A+++APTRELA QI AK+F+ S ++ ++GG+P G Q
Sbjct: 226 PTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQ 268
>TIGR_CMR|VC_2564 [details] [associations]
symbol:VC_2564 "ATP-dependent RNA helicase DbpA"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE003852 GenomeReviews:AE003852_GR
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
KO:K05591 ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
OMA:THEKSTI PIR:B82060 RefSeq:NP_232192.1 ProteinModelPortal:Q9KP15
DNASU:2615581 GeneID:2615581 KEGG:vch:VC2564 PATRIC:20084152
Uniprot:Q9KP15
Length = 460
Score = 156 (60.0 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 32/69 (46%), Positives = 46/69 (66%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VF TK++V+++ AL + S I +HGD Q++RD L F ILVATDVAARG
Sbjct: 247 VVFCNTKREVQNVADALHQSGFSVIELHGDMEQRERDQALVQFANKSISILVATDVAARG 306
Query: 170 LDVEDVNTV 178
LDV++++ V
Sbjct: 307 LDVDNLDAV 315
Score = 92 (37.4 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALRNICIF---GGTPKGPQ 85
ALVL PTRELA Q+ T + A+ NI + GG P GPQ
Sbjct: 75 ALVLCPTRELADQVATDIRTLGRAIHNIKVLTLCGGMPMGPQ 116
>TIGR_CMR|GSU_0491 [details] [associations]
symbol:GSU_0491 "ATP-dependent RNA helicase RhlE"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE017180 GenomeReviews:AE017180_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807
RefSeq:NP_951550.1 ProteinModelPortal:Q74FW1 GeneID:2686040
KEGG:gsu:GSU0491 PATRIC:22023733 OMA:TTHEHIE ProtClustDB:CLSK827872
BioCyc:GSUL243231:GH27-490-MONOMER Uniprot:Q74FW1
Length = 450
Score = 151 (58.2 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ I+F TK+ E++ L+ + HSA +HGD Q R+ + +QG+ +LVATDVAA
Sbjct: 246 RAIIFSATKRDAENLALELKAQGHSAAALHGDMPQNARNRTIAAMKQGRIRLLVATDVAA 305
Query: 168 RGLDVEDVNTV 178
RGLDV ++ V
Sbjct: 306 RGLDVTGISHV 316
Score = 99 (39.9 bits), Expect = 2.6e-15, Sum P(2) = 2.6e-15
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALR--NICIFGGTP 81
++LPA +S P G GP LVL PTRELAQQ+ + + + +R + I GG P
Sbjct: 55 FVLPALQRLS-SPPQGPGRGPRVLVLTPTRELAQQVTDAVRTYGAFMRVRSGAILGGMP 112
>UNIPROTKB|I3LRT7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
GeneTree:ENSGT00620000087942 EMBL:CU929824
Ensembl:ENSSSCT00000031627 OMA:VGDERTM Uniprot:I3LRT7
Length = 290
Score = 193 (73.0 bits), Expect = 2.6e-15, P = 2.6e-15
Identities = 39/71 (54%), Positives = 51/71 (71%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ +VFVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAA
Sbjct: 109 RTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAA 168
Query: 168 RGLDVEDVNTV 178
RGLD+E+V V
Sbjct: 169 RGLDIENVQHV 179
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 143 (55.4 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+V+VF TK + L ++ + IHG+K+Q R L DF+ G +LVATD+AA
Sbjct: 247 QVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLVATDIAA 306
Query: 168 RGLDVEDV-NTVN 179
RGLD+E++ + VN
Sbjct: 307 RGLDIEELPHVVN 319
Score = 110 (43.8 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 25/64 (39%), Positives = 38/64 (59%)
Query: 25 YMLPAAVHISHQEPVKQGDGPI-ALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGGTP 81
+ LP H+ ++P +G P+ AL+L PTRELA QI +++S L R++ +FGG
Sbjct: 55 FTLPLLQHLITRQPHAKGRRPVRALILTPTRELAAQIGENVRDYSKYLNIRSLVVFGGVS 114
Query: 82 KGPQ 85
PQ
Sbjct: 115 INPQ 118
>ZFIN|ZDB-GENE-040120-6 [details] [associations]
symbol:eif4a1b "eukaryotic translation initiation
factor 4A, isoform 1B" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040120-6 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 OrthoDB:EOG4640C1 EMBL:BC153507
IPI:IPI00509685 UniGene:Dr.104803 ProteinModelPortal:A8E590
SMR:A8E590 STRING:A8E590 ArrayExpress:A8E590 Uniprot:A8E590
Length = 429
Score = 160 (61.4 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 35/126 (27%), Positives = 72/126 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q+DRD ++ +FR G + +L+ TD+ A
Sbjct: 297 QAVIFINTRRKVDWLTEKMHARDFTVSALHGDMDQKDRDLIMREFRSGSSRVLITTDLLA 356
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ +++ E K TL E+ +
Sbjct: 357 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMVTEDDKRTLRDIETFYN 415
Query: 226 STLSEM 231
+T+ EM
Sbjct: 416 TTVEEM 421
Score = 84 (34.6 bits), Expect = 2.7e-15, Sum P(2) = 2.7e-15
Identities = 26/54 (48%), Positives = 32/54 (59%)
Query: 30 AVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
A+ I Q ++ G ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 110 AISILQQIDIEL-KGTQALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGT 161
>UNIPROTKB|F1SUG8 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00680000100003 OMA:GDTEEGC
EMBL:CU468175 Ensembl:ENSSSCT00000011216 Uniprot:F1SUG8
Length = 737
Score = 152 (58.6 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 108 KVIVFVETKKKVEDITRALRRE-RHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVA 166
+ I+F ETKK V ++ A+ + +A C+HGD Q R+ L FR+G +LVAT+VA
Sbjct: 391 RAIIFCETKKNVTEM--AMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVA 448
Query: 167 ARGLDVEDVNTV 178
ARGLD+ +V+ V
Sbjct: 449 ARGLDIPEVDLV 460
Score = 103 (41.3 bits), Expect = 3.0e-15, Sum P(2) = 3.0e-15
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 35 HQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGT 80
+QE +K+ P LVLAPTRELA Q+ K+ + L C +GGT
Sbjct: 202 NQETIKKSRSPKVLVLAPTRELANQVAKDFKDITKKLSVACFYGGT 247
>UNIPROTKB|E2RPT4 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
EMBL:AAEX03002786 Ensembl:ENSCAFT00000038045 Uniprot:E2RPT4
Length = 687
Score = 152 (58.6 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 108 KVIVFVETKKKVEDITRALRRE-RHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVA 166
+ I+F ETKK V ++ A+ + +A C+HGD Q R+ L FR+G +LVAT+VA
Sbjct: 393 RAIIFCETKKNVTEM--AMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVA 450
Query: 167 ARGLDVEDVNTV 178
ARGLD+ +V+ V
Sbjct: 451 ARGLDIPEVDLV 462
Score = 102 (41.0 bits), Expect = 3.2e-15, Sum P(2) = 3.2e-15
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 35 HQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGT 80
+QE +K+ P LVLAPTRELA Q+ K+ + L C +GGT
Sbjct: 204 NQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 249
>MGI|MGI:2182303 [details] [associations]
symbol:Ddx50 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 50"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 MGI:MGI:2182303 GO:GO:0005886 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00680000100003 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OrthoDB:EOG46143T CTD:79009 KO:K13183
OMA:GDTEEGC EMBL:AF334104 IPI:IPI00117771 RefSeq:NP_444413.1
UniGene:Mm.114116 ProteinModelPortal:Q99MJ9 SMR:Q99MJ9
PhosphoSite:Q99MJ9 PaxDb:Q99MJ9 PRIDE:Q99MJ9
Ensembl:ENSMUST00000020270 GeneID:94213 KEGG:mmu:94213
UCSC:uc007fhp.1 InParanoid:Q99MJ9 NextBio:352175 Bgee:Q99MJ9
CleanEx:MM_DDX50 Genevestigator:Q99MJ9
GermOnline:ENSMUSG00000020076 Uniprot:Q99MJ9
Length = 734
Score = 152 (58.6 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 108 KVIVFVETKKKVEDITRALRRE-RHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVA 166
+ I+F ETKK V ++ A+ + +A C+HGD Q R+ L FR+G +LVAT+VA
Sbjct: 388 RAIIFCETKKNVTEM--AMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVA 445
Query: 167 ARGLDVEDVNTV 178
ARGLD+ +V+ V
Sbjct: 446 ARGLDIPEVDLV 457
Score = 102 (41.0 bits), Expect = 3.8e-15, Sum P(2) = 3.8e-15
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 35 HQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGT 80
+QE +K+ P LVLAPTRELA Q+ K+ + L C +GGT
Sbjct: 199 NQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 244
>UNIPROTKB|F1MMK3 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005886 "plasma membrane" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00680000100003 CTD:79009 KO:K13183
OMA:GDTEEGC EMBL:DAAA02061828 IPI:IPI00689334 RefSeq:NP_001192982.1
UniGene:Bt.55841 PRIDE:F1MMK3 Ensembl:ENSBTAT00000022002
GeneID:534331 KEGG:bta:534331 NextBio:20876363 ArrayExpress:F1MMK3
Uniprot:F1MMK3
Length = 737
Score = 152 (58.6 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 108 KVIVFVETKKKVEDITRALRRE-RHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVA 166
+ I+F ETKK V ++ A+ + +A C+HGD Q R+ L FR+G +LVAT+VA
Sbjct: 391 RAIIFCETKKNVTEM--AMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVA 448
Query: 167 ARGLDVEDVNTV 178
ARGLD+ +V+ V
Sbjct: 449 ARGLDIPEVDLV 460
Score = 102 (41.0 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 24/49 (48%), Positives = 30/49 (61%)
Query: 35 HQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNI---CIFGGT 80
+QE +K+ P LVLAPTRELA Q VAK+F R + C +GGT
Sbjct: 202 NQETIKKSRSPKVLVLAPTRELANQ---VAKDFKDVTRKLSVACFYGGT 247
>UNIPROTKB|Q9BQ39 [details] [associations]
symbol:DDX50 "ATP-dependent RNA helicase DDX50"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
EMBL:CH471083 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:AL359844 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:AF334103 EMBL:BC000210
EMBL:BC000272 EMBL:BC018637 IPI:IPI00031554 RefSeq:NP_076950.1
UniGene:Hs.522984 PDB:2E29 PDBsum:2E29 ProteinModelPortal:Q9BQ39
SMR:Q9BQ39 IntAct:Q9BQ39 STRING:Q9BQ39 PhosphoSite:Q9BQ39
DMDM:55976580 SWISS-2DPAGE:Q9BQ39 PaxDb:Q9BQ39 PeptideAtlas:Q9BQ39
PRIDE:Q9BQ39 DNASU:79009 Ensembl:ENST00000373585 GeneID:79009
KEGG:hsa:79009 UCSC:uc001jou.3 CTD:79009 GeneCards:GC10P070661
HGNC:HGNC:17906 HPA:HPA037388 MIM:610373 neXtProt:NX_Q9BQ39
PharmGKB:PA134948525 InParanoid:Q9BQ39 KO:K13183 OMA:GDTEEGC
PhylomeDB:Q9BQ39 ChiTaRS:DDX50 EvolutionaryTrace:Q9BQ39
GenomeRNAi:79009 NextBio:67657 ArrayExpress:Q9BQ39 Bgee:Q9BQ39
CleanEx:HS_DDX50 Genevestigator:Q9BQ39 Uniprot:Q9BQ39
Length = 737
Score = 152 (58.6 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 108 KVIVFVETKKKVEDITRALRRE-RHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVA 166
+ I+F ETKK V ++ A+ + +A C+HGD Q R+ L FR+G +LVAT+VA
Sbjct: 391 RAIIFCETKKNVTEM--AMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVA 448
Query: 167 ARGLDVEDVNTV 178
ARGLD+ +V+ V
Sbjct: 449 ARGLDIPEVDLV 460
Score = 102 (41.0 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 35 HQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGT 80
+QE +K+ P LVLAPTRELA Q+ K+ + L C +GGT
Sbjct: 202 NQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 247
>UNIPROTKB|E2QTT0 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 OMA:GDTEEGC EMBL:AAEX03002786
Ensembl:ENSCAFT00000021867 NextBio:20898308 Uniprot:E2QTT0
Length = 738
Score = 152 (58.6 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 32/72 (44%), Positives = 47/72 (65%)
Query: 108 KVIVFVETKKKVEDITRALRRE-RHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVA 166
+ I+F ETKK V ++ A+ + +A C+HGD Q R+ L FR+G +LVAT+VA
Sbjct: 392 RAIIFCETKKNVTEM--AMNPHIKQNAQCLHGDIAQSQREITLKGFREGSFKVLVATNVA 449
Query: 167 ARGLDVEDVNTV 178
ARGLD+ +V+ V
Sbjct: 450 ARGLDIPEVDLV 461
Score = 102 (41.0 bits), Expect = 3.9e-15, Sum P(2) = 3.9e-15
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 35 HQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGT 80
+QE +K+ P LVLAPTRELA Q+ K+ + L C +GGT
Sbjct: 203 NQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGT 248
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 155 (59.6 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 28/70 (40%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
+I+FV KK + + ++L + ++A +HG K Q+ R++ L++ + G ILVATDVA R
Sbjct: 666 IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGR 725
Query: 169 GLDVEDVNTV 178
G+D++DV+ V
Sbjct: 726 GIDIQDVSMV 735
Score = 98 (39.6 bits), Expect = 4.6e-15, Sum P(2) = 4.6e-15
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 25 YMLPAAVHISHQ---EPVKQGD-GPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFG 78
+++P V I+ + +++ D GP A++LAPTRELAQQI+ +F L R + + G
Sbjct: 444 FLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIG 503
Query: 79 GTPKGPQ 85
G + Q
Sbjct: 504 GISREDQ 510
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 155 (59.6 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 28/70 (40%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
+I+FV KK + + ++L + ++A +HG K Q+ R++ L++ + G ILVATDVA R
Sbjct: 667 IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGR 726
Query: 169 GLDVEDVNTV 178
G+D++DV+ V
Sbjct: 727 GIDIQDVSMV 736
Score = 98 (39.6 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 25 YMLPAAVHISHQ---EPVKQGD-GPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFG 78
+++P V I+ + +++ D GP A++LAPTRELAQQI+ +F L R + + G
Sbjct: 445 FLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIG 504
Query: 79 GTPKGPQ 85
G + Q
Sbjct: 505 GISREDQ 511
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 155 (59.6 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 28/70 (40%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
+I+FV KK + + ++L + ++A +HG K Q+ R++ L++ + G ILVATDVA R
Sbjct: 667 IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGR 726
Query: 169 GLDVEDVNTV 178
G+D++DV+ V
Sbjct: 727 GIDIQDVSMV 736
Score = 98 (39.6 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 25 YMLPAAVHISHQ---EPVKQGD-GPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFG 78
+++P V I+ + +++ D GP A++LAPTRELAQQI+ +F L R + + G
Sbjct: 445 FLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIG 504
Query: 79 GTPKGPQ 85
G + Q
Sbjct: 505 GISREDQ 511
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 155 (59.6 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 28/70 (40%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
+I+FV KK + + ++L + ++A +HG K Q+ R++ L++ + G ILVATDVA R
Sbjct: 667 IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGR 726
Query: 169 GLDVEDVNTV 178
G+D++DV+ V
Sbjct: 727 GIDIQDVSMV 736
Score = 98 (39.6 bits), Expect = 4.7e-15, Sum P(2) = 4.7e-15
Identities = 24/67 (35%), Positives = 39/67 (58%)
Query: 25 YMLPAAVHISHQ---EPVKQGD-GPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFG 78
+++P V I+ + +++ D GP A++LAPTRELAQQI+ +F L R + + G
Sbjct: 445 FLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIG 504
Query: 79 GTPKGPQ 85
G + Q
Sbjct: 505 GISREDQ 511
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 155 (59.6 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 28/70 (40%), Positives = 48/70 (68%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
+I+FV KK + + ++L + ++A +HG K Q+ R++ L++ + G ILVATDVA R
Sbjct: 654 IIIFVNQKKGCDVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGR 713
Query: 169 GLDVEDVNTV 178
G+D++DV+ V
Sbjct: 714 GIDIQDVSMV 723
Score = 96 (38.9 bits), Expect = 7.2e-15, Sum P(2) = 7.2e-15
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 25 YMLPAAVHISHQ---EPVKQGD-GPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFG 78
+++P V I+ + ++ D GP A++LAPTRELAQQI+ +F L R + + G
Sbjct: 432 FLIPLLVWITTLPKIDRIEDSDQGPYAIILAPTRELAQQIEEETIKFGKPLGIRTVAVIG 491
Query: 79 GTPKGPQ 85
G + Q
Sbjct: 492 GISREDQ 498
>CGD|CAL0001638 [details] [associations]
symbol:FAL1 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0097078 "FAl1-SGD1 complex"
evidence=IEA] [GO:0000462 "maturation of SSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0001638 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:AACQ01000041 EMBL:AACQ01000040 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AJ250879
RefSeq:XP_718509.1 RefSeq:XP_718592.1 ProteinModelPortal:Q5A9Z6
SMR:Q5A9Z6 GeneID:3639739 GeneID:3639839 KEGG:cal:CaO19.10024
KEGG:cal:CaO19.2488 KO:K13025 Uniprot:Q5A9Z6
Length = 399
Score = 164 (62.8 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 27/71 (38%), Positives = 49/71 (69%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK KV + ++++ + + +HGD Q +RD ++NDFR+G + +L++TDV A
Sbjct: 267 QAVIFCNTKLKVNWLADQMKKQNFTVVAMHGDMKQDERDSIMNDFRRGNSRVLISTDVWA 326
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 327 RGIDVQQVSLV 337
Score = 70 (29.7 bits), Expect = 8.2e-15, Sum P(2) = 8.2e-15
Identities = 19/40 (47%), Positives = 23/40 (57%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALR---NICIFGGTPKG 83
AL+L+PTRELA QIQ V K + + CI GG G
Sbjct: 97 ALILSPTRELAIQIQNVVKHLGDYMNIHTHACI-GGKNVG 135
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 154 (59.3 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 32/69 (46%), Positives = 45/69 (65%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++FVETK+ + +T L + A IHGD+TQ +R+ L+ F+ A ILVAT VAARG
Sbjct: 415 LIFVETKRMADQLTDFLIMQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARG 474
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 475 LDIPNVTHV 483
Score = 94 (38.1 bits), Expect = 8.3e-15, Sum P(2) = 8.3e-15
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
P ALVLAPTRELA QI A++F+ S +R ++GG P G Q
Sbjct: 238 PSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQ 280
>UNIPROTKB|E2QTL6 [details] [associations]
symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003725 "double-stranded
RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0009615
GO:GO:0003725 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0043330 InterPro:IPR014014 PROSITE:PS51195
CTD:9188 RefSeq:XP_851746.2 ProteinModelPortal:E2QTL6
Ensembl:ENSCAFT00000021901 GeneID:476891 KEGG:cfa:476891
NextBio:20852481 Uniprot:E2QTL6
Length = 785
Score = 145 (56.1 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ I+F ETKK+ +++++ + R A +HGD Q+ R+ L FR G +LVAT+VAA
Sbjct: 442 RTIIFCETKKEAQELSQNVSI-RQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAA 500
Query: 168 RGLDVEDVNTV 178
RGLD+ +V+ V
Sbjct: 501 RGLDIPEVDLV 511
Score = 109 (43.4 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 25 YMLPAAVHISHQ-EPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNI---CIFGGT 80
+ +P V + + + K+G P LVLAPTRELA Q V+++FS R + C +GGT
Sbjct: 242 FAIPLIVKLQGELQDRKRGRAPQVLVLAPTRELANQ---VSRDFSDITRKLAVACFYGGT 298
Query: 81 PKGPQ 85
P G Q
Sbjct: 299 PYGGQ 303
>UNIPROTKB|F6V8G4 [details] [associations]
symbol:DDX21 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 OMA:QCEPPRE EMBL:AAEX03002786
Ensembl:ENSCAFT00000021901 Uniprot:F6V8G4
Length = 786
Score = 145 (56.1 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ I+F ETKK+ +++++ + R A +HGD Q+ R+ L FR G +LVAT+VAA
Sbjct: 442 RTIIFCETKKEAQELSQNVSI-RQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAA 500
Query: 168 RGLDVEDVNTV 178
RGLD+ +V+ V
Sbjct: 501 RGLDIPEVDLV 511
Score = 109 (43.4 bits), Expect = 9.0e-15, Sum P(2) = 9.0e-15
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 25 YMLPAAVHISHQ-EPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNI---CIFGGT 80
+ +P V + + + K+G P LVLAPTRELA Q V+++FS R + C +GGT
Sbjct: 242 FAIPLIVKLQGELQDRKRGRAPQVLVLAPTRELANQ---VSRDFSDITRKLAVACFYGGT 298
Query: 81 PKGPQ 85
P G Q
Sbjct: 299 PYGGQ 303
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 136 (52.9 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 27/72 (37%), Positives = 47/72 (65%)
Query: 107 FKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVA 166
+K+I+FV++K + ++ + ++ +HG ++Q DR+ LN R G+ ILVATD+A
Sbjct: 339 YKMIIFVKSKVMADHLSSDFCMKGINSQGLHGGRSQSDREMSLNMLRSGEVQILVATDLA 398
Query: 167 ARGLDVEDVNTV 178
+RG+DV D+ V
Sbjct: 399 SRGIDVPDITHV 410
Score = 115 (45.5 bits), Expect = 9.8e-15, Sum P(2) = 9.8e-15
Identities = 26/68 (38%), Positives = 41/68 (60%)
Query: 25 YMLPAAVHISHQ------EPVKQGDGPIALVLAPTRELAQQIQTVAKEFS-SALRNICIF 77
++LPA +HI Q +Q P LVL+PTRELAQQI+ K++S + +++C++
Sbjct: 138 FLLPALLHIDAQLAQYEKNDEEQKPSPFVLVLSPTRELAQQIEGEVKKYSYNGYKSVCLY 197
Query: 78 GGTPKGPQ 85
GG + Q
Sbjct: 198 GGGSRPEQ 205
Score = 41 (19.5 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 173 EDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIREL 214
E V VN GSL L++ +++Q E V + R+ ++ L
Sbjct: 291 EAVMAVN-GSLDLTSCKSVTQFFEFVPHDSRFLRVCEIVNFL 331
>DICTYBASE|DDB_G0269192 [details] [associations]
symbol:tifA "eukaryotic translation initiation factor
4A" species:44689 "Dictyostelium discoideum" [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] [GO:0006412 "translation"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0269192 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
KO:K13025 OMA:LALGDFM RefSeq:XP_646270.1 ProteinModelPortal:Q55D61
SMR:Q55D61 PRIDE:Q55D61 EnsemblProtists:DDB0191511 GeneID:8617226
KEGG:ddi:DDB_G0269192 Uniprot:Q55D61
Length = 405
Score = 159 (61.0 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 28/87 (32%), Positives = 52/87 (59%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TKKKV+ +T +R + +HGD Q++R+ ++ FR G+ +L+ TD+ A
Sbjct: 273 QAVIFCNTKKKVDQLTEQMRDANFTVASMHGDMVQKEREEIIKSFRSGENRVLITTDILA 332
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQV 194
RG+DV+ V+ V L + + I ++
Sbjct: 333 RGIDVQQVSLVINYDLPIDRENYIHRI 359
Score = 79 (32.9 bits), Expect = 1.0e-14, Sum P(2) = 1.0e-14
Identities = 19/37 (51%), Positives = 24/37 (64%)
Query: 45 PIALVLAPTRELAQQIQTVA---KEFSSALRNICIFG 78
P L+L+PTRELAQQIQ VA EF + + C+ G
Sbjct: 101 PQVLILSPTRELAQQIQKVALALSEFMNIQVHACVGG 137
>UNIPROTKB|A4FV23 [details] [associations]
symbol:DDX21 "DDX21 protein" species:9913 "Bos taurus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:DAAA02061828
EMBL:BC123648 IPI:IPI00694353 RefSeq:NP_001076996.1
UniGene:Bt.92068 Ensembl:ENSBTAT00000019351 GeneID:781917
KEGG:bta:781917 InParanoid:A4FV23 NextBio:20925123 Uniprot:A4FV23
Length = 784
Score = 146 (56.5 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 30/71 (42%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ I+F ETKK+ +++++ + R A +HGD Q+ R+ L FR G +LVAT+VAA
Sbjct: 441 RTIIFCETKKEAQELSQNVA-VRQDAQSLHGDIPQKQREITLKGFRNGDFGVLVATNVAA 499
Query: 168 RGLDVEDVNTV 178
RGLD+ +V+ V
Sbjct: 500 RGLDIPEVDLV 510
Score = 106 (42.4 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGTPKGPQ 85
K+G P LVLAPTRELA Q+ + + L C +GGTP G Q
Sbjct: 257 KRGRAPQVLVLAPTRELASQVSRDFSDITKKLAVACFYGGTPYGGQ 302
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 165 (63.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 35/69 (50%), Positives = 46/69 (66%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETK+ D+ L R+ + + IHGD Q +R+ L+ FR G APILVAT VAARG
Sbjct: 496 LVFVETKRGASDLAYYLNRQNYEVVTIHGDLKQFEREKHLDLFRTGTAPILVATAVAARG 555
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 556 LDIPNVKHV 564
Score = 74 (31.1 bits), Expect = 1.5e-14, Sum P(2) = 1.5e-14
Identities = 24/78 (30%), Positives = 42/78 (53%)
Query: 28 PAAVHIS-HQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGP 84
P AVH S ++ P ALVL+PTREL+ QI +++F+ + + + ++GG +
Sbjct: 298 PDAVHRSVTSSGGRKKQYPSALVLSPTRELSLQIFNESRKFAYRTPITSALLYGGR-ENY 356
Query: 85 QDCLPLHRFVFNCQYEMA 102
+D +H+ C +A
Sbjct: 357 KD--QIHKLRLGCHILIA 372
>UNIPROTKB|F1SUG7 [details] [associations]
symbol:DDX21 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043330 "response to exogenous dsRNA" evidence=IEA]
[GO:0009615 "response to virus" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00680000100003
OMA:EILCVAY EMBL:CT737244 EMBL:CU468175 Ensembl:ENSSSCT00000011217
Uniprot:F1SUG7
Length = 855
Score = 146 (56.5 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 31/73 (42%), Positives = 50/73 (68%)
Query: 108 KVIVFVETKKKVEDITR--ALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDV 165
+ I+F ETKK+ +++++ A+R++ S +HGD Q+ R+ L FR G +LVAT+V
Sbjct: 512 RTIIFCETKKEAQELSQNAAVRQDAQS---LHGDIPQKQREITLKGFRNGDFGVLVATNV 568
Query: 166 AARGLDVEDVNTV 178
AARGLD+ +V+ V
Sbjct: 569 AARGLDIPEVDLV 581
Score = 106 (42.4 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGTPKGPQ 85
K+G P LVLAPTRELA Q+ + + L C +GGTP G Q
Sbjct: 328 KRGRAPQVLVLAPTRELASQVSRDFSDITKKLAVACFYGGTPYGGQ 373
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 143 (55.4 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
+I+FV K+ +E I + L A+ +HG K+Q+ R+ + R A ILVATD+A R
Sbjct: 519 IIIFVNLKRNIEAIAKQLNAIGWHAVTLHGSKSQEQRERAIEQLRNKTADILVATDIAGR 578
Query: 169 GLDVEDVNTV 178
G+D+ +V+ V
Sbjct: 579 GIDIPNVSLV 588
Score = 107 (42.7 bits), Expect = 1.7e-14, Sum P(2) = 1.7e-14
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 25 YMLPAAVHISHQEPVKQGD---GPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGG 79
+++P + IS P+ + + GP A+VLAPTRELAQQIQ +F+ L R + + GG
Sbjct: 303 FIIPLIIAISKLPPLTESNMHLGPYAVVLAPTRELAQQIQVEGNKFAEPLGFRCVSVVGG 362
>TAIR|locus:2020078 [details] [associations]
symbol:EIF4A-2 "eif4a-2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=RCA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006096 "glycolysis" evidence=RCA] [GO:0009651 "response to
salt stress" evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005774 GO:GO:0046686 EMBL:AC005287
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 EMBL:X65053
EMBL:AF386923 EMBL:AF428462 EMBL:BT008504 EMBL:AK226344
EMBL:AY087965 IPI:IPI00522023 PIR:JC1453 RefSeq:NP_175829.1
UniGene:At.195 ProteinModelPortal:P41377 SMR:P41377 STRING:P41377
PaxDb:P41377 PRIDE:P41377 ProMEX:P41377 EnsemblPlants:AT1G54270.1
GeneID:841868 KEGG:ath:AT1G54270 GeneFarm:936 TAIR:At1g54270
InParanoid:P41377 OMA:QVVWEEN PhylomeDB:P41377
ProtClustDB:CLSN2679594 Genevestigator:P41377 GermOnline:AT1G54270
Uniprot:P41377
Length = 412
Score = 159 (61.0 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 27/69 (39%), Positives = 45/69 (65%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++FV T++KV+ +T +R H+ HGD Q RD ++ +FR G + +L+ TD+ ARG
Sbjct: 282 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 341
Query: 170 LDVEDVNTV 178
+DV+ V+ V
Sbjct: 342 IDVQQVSLV 350
Score = 77 (32.2 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQI+ V + ++ + C+ GGT
Sbjct: 110 ALVLAPTRELAQQIEKVMRALGDYQGVKVHACV-GGT 145
>UNIPROTKB|Q9NR30 [details] [associations]
symbol:DDX21 "Nucleolar RNA helicase 2" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0009615 "response
to virus" evidence=IEA] [GO:0043330 "response to exogenous dsRNA"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:CH471083 GO:GO:0009615 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0043330 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:U41387 EMBL:AF261903 EMBL:AF261917 EMBL:AF261904 EMBL:AF261905
EMBL:AF261906 EMBL:AF261907 EMBL:AF261908 EMBL:AF261909
EMBL:AF261910 EMBL:AF261911 EMBL:AF261912 EMBL:AF261913
EMBL:AF261914 EMBL:AF261915 EMBL:AF261916 EMBL:AK315585
EMBL:CR749598 EMBL:AL359844 EMBL:BC008071 IPI:IPI00015953
IPI:IPI00477179 PIR:PC6010 RefSeq:NP_001243839.1 RefSeq:NP_004719.2
UniGene:Hs.223141 ProteinModelPortal:Q9NR30 SMR:Q9NR30
IntAct:Q9NR30 MINT:MINT-231639 STRING:Q9NR30 PhosphoSite:Q9NR30
DMDM:76803555 SWISS-2DPAGE:Q9NR30 PaxDb:Q9NR30 PeptideAtlas:Q9NR30
PRIDE:Q9NR30 DNASU:9188 Ensembl:ENST00000354185 GeneID:9188
KEGG:hsa:9188 UCSC:uc001jov.1 CTD:9188 GeneCards:GC10P070715
H-InvDB:HIX0008880 HGNC:HGNC:2744 HPA:HPA036592 MIM:606357
neXtProt:NX_Q9NR30 PharmGKB:PA27210 HOGENOM:HOG000268805
HOVERGEN:HBG051331 InParanoid:Q9NR30 OMA:EILCVAY OrthoDB:EOG46143T
PhylomeDB:Q9NR30 ChiTaRS:DDX21 GenomeRNAi:9188 NextBio:34453
ArrayExpress:Q9NR30 Bgee:Q9NR30 CleanEx:HS_DDX21
Genevestigator:Q9NR30 GermOnline:ENSG00000165732 Uniprot:Q9NR30
Length = 783
Score = 145 (56.1 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 30/73 (41%), Positives = 50/73 (68%)
Query: 108 KVIVFVETKKKVEDITR--ALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDV 165
+ I+F ETKK+ +++++ A++++ S +HGD Q+ R+ L FR G +LVAT+V
Sbjct: 440 RTIIFCETKKEAQELSQNSAIKQDAQS---LHGDIPQKQREITLKGFRNGSFGVLVATNV 496
Query: 166 AARGLDVEDVNTV 178
AARGLD+ +V+ V
Sbjct: 497 AARGLDIPEVDLV 509
Score = 106 (42.4 bits), Expect = 1.8e-14, Sum P(2) = 1.8e-14
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGTPKGPQ 85
K+G P LVLAPTRELA Q+ + + L C +GGTP G Q
Sbjct: 256 KRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQ 301
>ZFIN|ZDB-GENE-031030-2 [details] [associations]
symbol:eif4a1a "eukaryotic translation initiation
factor 4A, isoform 1A" species:7955 "Danio rerio" [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-2 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 HSSP:P10081 GeneTree:ENSGT00530000062880
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:CR848032 EMBL:BC048899
IPI:IPI00502344 RefSeq:NP_938180.1 UniGene:Dr.75120 SMR:Q802C9
STRING:Q802C9 Ensembl:ENSDART00000058913 GeneID:386634
KEGG:dre:386634 CTD:386634 InParanoid:Q802C9 NextBio:20813962
Uniprot:Q802C9
Length = 406
Score = 157 (60.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 35/126 (27%), Positives = 72/126 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 274 QAVIFINTRRKVDWLTEKMHARDFTVSALHGDMEQKERDVIMKEFRSGSSRVLITTDLLA 333
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ ++I E K TL E+ +
Sbjct: 334 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMITEDDKRTLRDIETFYN 392
Query: 226 STLSEM 231
+T+ EM
Sbjct: 393 TTVEEM 398
Score = 80 (33.2 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
A+VLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 103 AMVLAPTRELAQQIQKVVLALGDYMGATCHACI-GGT 138
>UNIPROTKB|I3LLD5 [details] [associations]
symbol:I3LLD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 Ensembl:ENSSSCT00000032168 OMA:SKRERIM
Uniprot:I3LLD5
Length = 401
Score = 155 (59.6 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 34/128 (26%), Positives = 73/128 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 269 QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLA 328
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ +++ E K TL E+ +
Sbjct: 329 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMVTEEDKRTLRDIETFYN 387
Query: 226 STLSEMVL 233
+++ EM L
Sbjct: 388 TSIEEMPL 395
Score = 82 (33.9 bits), Expect = 2.2e-14, Sum P(2) = 2.2e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 103 ALVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGT 138
>UNIPROTKB|Q3SZ54 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 EMBL:BC103130
IPI:IPI00698793 RefSeq:NP_001029400.1 UniGene:Bt.14169
ProteinModelPortal:Q3SZ54 SMR:Q3SZ54 STRING:Q3SZ54 PRIDE:Q3SZ54
Ensembl:ENSBTAT00000000144 GeneID:504958 KEGG:bta:504958 CTD:1973
InParanoid:Q3SZ54 KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1
NextBio:20866906 Uniprot:Q3SZ54
Length = 406
Score = 155 (59.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 34/128 (26%), Positives = 73/128 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 274 QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLA 333
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ +++ E K TL E+ +
Sbjct: 334 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMVTEEDKRTLRDIETFYN 392
Query: 226 STLSEMVL 233
+++ EM L
Sbjct: 393 TSIEEMPL 400
Score = 82 (33.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 103 ALVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGT 138
>UNIPROTKB|F1P895 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 OMA:PILEMED EMBL:AAEX03003619
EMBL:AAEX03003621 EMBL:AAEX03003620 Ensembl:ENSCAFT00000026357
Uniprot:F1P895
Length = 406
Score = 155 (59.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 34/128 (26%), Positives = 73/128 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 274 QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLA 333
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ +++ E K TL E+ +
Sbjct: 334 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMVTEEDKRTLRDIETFYN 392
Query: 226 STLSEMVL 233
+++ EM L
Sbjct: 393 TSIEEMPL 400
Score = 82 (33.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 103 ALVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGT 138
>UNIPROTKB|J9NY67 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
EMBL:AAEX03006506 EMBL:AAEX03006505 RefSeq:NP_001238871.1
ProteinModelPortal:J9NY67 Ensembl:ENSCAFT00000014379
GeneID:100688577 KEGG:cfa:100688577 Uniprot:J9NY67
Length = 406
Score = 155 (59.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 34/128 (26%), Positives = 73/128 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 274 QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLA 333
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ +++ E K TL E+ +
Sbjct: 334 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMVTEEDKRTLRDIETFYN 392
Query: 226 STLSEMVL 233
+++ EM L
Sbjct: 393 TSIEEMPL 400
Score = 82 (33.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 103 ALVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGT 138
>UNIPROTKB|P60842 [details] [associations]
symbol:EIF4A1 "Eukaryotic initiation factor 4A-I"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0003729
"mRNA binding" evidence=TAS] [GO:0004386 "helicase activity"
evidence=TAS] [GO:0000339 "RNA cap binding" evidence=TAS]
[GO:0008135 "translation factor activity, nucleic acid binding"
evidence=TAS] [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=TAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0000288 "nuclear-transcribed mRNA catabolic
process, deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_17015 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005829 GO:GO:0005524
Reactome:REACT_6900 EMBL:CH471108 GO:GO:0019048
Pathway_Interaction_DB:mtor_4pathway GO:GO:0006413 GO:GO:0016281
GO:GO:0031100 GO:GO:0003729 GO:GO:0019221 GO:GO:0008135
GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 Reactome:REACT_1762 CTD:1973 KO:K03257
OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:D13748 EMBL:BT019880
EMBL:BT019881 EMBL:AK312630 EMBL:AC016876 EMBL:BC006210
EMBL:BC009585 EMBL:BC073752 IPI:IPI00025491 PIR:S33681
RefSeq:NP_001191439.1 RefSeq:NP_001407.1 UniGene:Hs.129673 PDB:2G9N
PDB:2ZU6 PDB:3EIQ PDBsum:2G9N PDBsum:2ZU6 PDBsum:3EIQ
ProteinModelPortal:P60842 SMR:P60842 DIP:DIP-29755N IntAct:P60842
MINT:MINT-5001111 STRING:P60842 PhosphoSite:P60842 DMDM:46397463
PaxDb:P60842 PRIDE:P60842 DNASU:1973 Ensembl:ENST00000293831
Ensembl:ENST00000577269 GeneID:1973 KEGG:hsa:1973 UCSC:uc002gho.2
GeneCards:GC17P007476 HGNC:HGNC:3282 HPA:CAB011689 MIM:602641
neXtProt:NX_P60842 PharmGKB:PA27710 PhylomeDB:P60842 ChiTaRS:EIF4A1
EvolutionaryTrace:P60842 GenomeRNAi:1973 NextBio:7987
ArrayExpress:P60842 Bgee:P60842 CleanEx:HS_EIF4A1
Genevestigator:P60842 GermOnline:ENSG00000161960 GO:GO:0000339
Uniprot:P60842
Length = 406
Score = 155 (59.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 34/128 (26%), Positives = 73/128 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 274 QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLA 333
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ +++ E K TL E+ +
Sbjct: 334 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMVTEEDKRTLRDIETFYN 392
Query: 226 STLSEMVL 233
+++ EM L
Sbjct: 393 TSIEEMPL 400
Score = 82 (33.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 103 ALVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGT 138
>UNIPROTKB|A6M928 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:CU914279 EMBL:DQ351283 RefSeq:NP_001093666.1
UniGene:Ssc.22034 ProteinModelPortal:A6M928 SMR:A6M928 PRIDE:A6M928
Ensembl:ENSSSCT00000019541 GeneID:100101929 KEGG:ssc:100101929
Uniprot:A6M928
Length = 406
Score = 155 (59.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 34/128 (26%), Positives = 73/128 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 274 QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLA 333
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ +++ E K TL E+ +
Sbjct: 334 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMVTEEDKRTLRDIETFYN 392
Query: 226 STLSEMVL 233
+++ EM L
Sbjct: 393 TSIEEMPL 400
Score = 82 (33.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 103 ALVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGT 138
>MGI|MGI:95303 [details] [associations]
symbol:Eif4a1 "eukaryotic translation initiation factor 4A1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95303 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 CTD:1973
KO:K03257 OMA:IKMFILD OrthoDB:EOG4640C1 EMBL:X03039 EMBL:X03040
EMBL:L36611 EMBL:M22873 EMBL:L36608 EMBL:L36609 EMBL:L36610
EMBL:AB011595 EMBL:AK077429 EMBL:BC049915 IPI:IPI00118676
PIR:JS0039 RefSeq:NP_659207.1 UniGene:Mm.279821 UniGene:Mm.371557
UniGene:Mm.473799 ProteinModelPortal:P60843 SMR:P60843
MINT:MINT-202155 STRING:P60843 PhosphoSite:P60843
REPRODUCTION-2DPAGE:P60843 PaxDb:P60843 PRIDE:P60843
Ensembl:ENSMUST00000163666 GeneID:13681 KEGG:mmu:13681
InParanoid:P60843 NextBio:284438 Bgee:P60843 CleanEx:MM_EIF4A1
Genevestigator:P60843 GermOnline:ENSMUSG00000064241 Uniprot:P60843
Length = 406
Score = 155 (59.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 34/128 (26%), Positives = 73/128 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 274 QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLA 333
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ +++ E K TL E+ +
Sbjct: 334 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMVTEEDKRTLRDIETFYN 392
Query: 226 STLSEMVL 233
+++ EM L
Sbjct: 393 TSIEEMPL 400
Score = 82 (33.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 103 ALVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGT 138
>UNIPROTKB|Q6P3V8 [details] [associations]
symbol:Eif4a1 "Protein Eif4a1" species:10116 "Rattus
norvegicus" [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:735141
GO:GO:0005524 GO:GO:0003743 EMBL:CH473948 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 CTD:1973 KO:K03257 OMA:IKMFILD
OrthoDB:EOG4640C1 EMBL:BC063812 IPI:IPI00369618 RefSeq:NP_955404.1
UniGene:Rn.91523 SMR:Q6P3V8 STRING:Q6P3V8
Ensembl:ENSRNOT00000049048 GeneID:287436 KEGG:rno:287436
InParanoid:Q6P3V8 NextBio:626135 Genevestigator:Q6P3V8
Uniprot:Q6P3V8
Length = 406
Score = 155 (59.6 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 34/128 (26%), Positives = 73/128 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 274 QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLA 333
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ +++ E K TL E+ +
Sbjct: 334 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMVTEEDKRTLRDIETFYN 392
Query: 226 STLSEMVL 233
+++ EM L
Sbjct: 393 TSIEEMPL 400
Score = 82 (33.9 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 103 ALVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGT 138
>TAIR|locus:2030285 [details] [associations]
symbol:AT1G72730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009505
"plant-type cell wall" evidence=IDA] [GO:0005774 "vacuolar
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0009744 "response
to sucrose stimulus" evidence=RCA] [GO:0009749 "response to glucose
stimulus" evidence=RCA] [GO:0009750 "response to fructose stimulus"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005774
GO:GO:0009505 GO:GO:0003743 EMBL:AC010926 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
ProtClustDB:CLSN2679594 EMBL:AJ010472 EMBL:AY060592 EMBL:AY142066
EMBL:AY088176 IPI:IPI00526542 PIR:B96752 PIR:T51347
RefSeq:NP_177417.1 UniGene:At.22983 ProteinModelPortal:Q9CAI7
SMR:Q9CAI7 IntAct:Q9CAI7 STRING:Q9CAI7 PaxDb:Q9CAI7 PRIDE:Q9CAI7
EnsemblPlants:AT1G72730.1 GeneID:843605 KEGG:ath:AT1G72730
GeneFarm:940 TAIR:At1g72730 InParanoid:Q9CAI7 OMA:AVINYHI
PhylomeDB:Q9CAI7 Genevestigator:Q9CAI7 GermOnline:AT1G72730
Uniprot:Q9CAI7
Length = 414
Score = 159 (61.0 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 27/69 (39%), Positives = 45/69 (65%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++FV T++KV+ +T +R H+ HGD Q RD ++ +FR G + +L+ TD+ ARG
Sbjct: 284 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 343
Query: 170 LDVEDVNTV 178
+DV+ V+ V
Sbjct: 344 IDVQQVSLV 352
Score = 76 (31.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSAL---RNICIFGGT 80
ALVLAPTRELAQQI+ V + L C+ GGT
Sbjct: 112 ALVLAPTRELAQQIEKVMRALGDYLGVKAQACV-GGT 147
>TAIR|locus:2088237 [details] [associations]
symbol:EIF4A1 "eukaryotic translation initiation factor
4A1" species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0006413 "translational initiation" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005618 "cell wall" evidence=IDA] [GO:0046686
"response to cadmium ion" evidence=IEP;RCA] [GO:0016020 "membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=RCA] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0009651 "response to salt stress" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005618 GO:GO:0046686 EMBL:CP002686 GO:GO:0005730
GO:GO:0016020 GO:GO:0048046 GO:GO:0006413 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OMA:SKRERIM
IPI:IPI00657454 RefSeq:NP_001030693.1 UniGene:At.23558
UniGene:At.28184 ProteinModelPortal:F4JEL4 SMR:F4JEL4 PRIDE:F4JEL4
EnsemblPlants:AT3G13920.2 GeneID:820605 KEGG:ath:AT3G13920
Uniprot:F4JEL4
Length = 415
Score = 159 (61.0 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 27/69 (39%), Positives = 45/69 (65%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++FV T++KV+ +T +R H+ HGD Q RD ++ +FR G + +L+ TD+ ARG
Sbjct: 282 VIFVNTRRKVDWLTDKMRSRDHTVSATHGDMDQNTRDIIMREFRSGSSRVLITTDLLARG 341
Query: 170 LDVEDVNTV 178
+DV+ V+ V
Sbjct: 342 IDVQQVSLV 350
Score = 76 (31.8 bits), Expect = 2.3e-14, Sum P(2) = 2.3e-14
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALR---NICIFGGT 80
ALVLAPTRELAQQI+ V + L + C+ GGT
Sbjct: 110 ALVLAPTRELAQQIEKVMRALGDYLGVKVHACV-GGT 145
>UNIPROTKB|J9NU36 [details] [associations]
symbol:EIF4A1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GeneTree:ENSGT00530000062880 EMBL:AAEX03006506
EMBL:AAEX03006505 Ensembl:ENSCAFT00000049437 Uniprot:J9NU36
Length = 423
Score = 155 (59.6 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 34/128 (26%), Positives = 73/128 (57%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 291 QAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTDLLA 350
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQES--S 225
RG+DV+ V+ V L + + I ++ + + ++ +++ E K TL E+ +
Sbjct: 351 RGIDVQQVSLVINYDLPTNRENYIHRIGRGGR-FGRKGVAINMVTEEDKRTLRDIETFYN 409
Query: 226 STLSEMVL 233
+++ EM L
Sbjct: 410 TSIEEMPL 417
Score = 82 (33.9 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 120 ALVLAPTRELAQQIQKVVMALGDYMGASCHACI-GGT 155
>ZFIN|ZDB-GENE-040426-2802 [details] [associations]
symbol:eif4a2 "eukaryotic translation initiation
factor 4A, isoform 2" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0006413
"translational initiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-040426-2802 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
EMBL:CT027646 EMBL:CU929049 IPI:IPI00507769
ProteinModelPortal:F1R166 Ensembl:ENSDART00000130781
ArrayExpress:F1R166 Bgee:F1R166 Uniprot:F1R166
Length = 411
Score = 152 (58.6 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 24/71 (33%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 279 QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDIIMREFRSGSSRVLITTDLLA 338
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 339 RGIDVQQVSLV 349
Score = 86 (35.3 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 26/54 (48%), Positives = 33/54 (61%)
Query: 30 AVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
A+ I Q ++Q + ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 92 AISILQQLEIEQKETQ-ALVLAPTRELAQQIQKVILALGDYMGASCHACI-GGT 143
>UNIPROTKB|Q485I3 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 154 (59.3 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 104 NPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVAT 163
N +F TKK+ + + AL + S + +HGD Q+DRD L F A ILVAT
Sbjct: 247 NQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVAT 306
Query: 164 DVAARGLDVEDVNTV 178
DVAARGLD++ ++ V
Sbjct: 307 DVAARGLDIDSLDLV 321
Score = 84 (34.6 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALRNICIF---GGTPKGPQ 85
++V+ PTRELA Q+ ++ + + NI I GGTP GPQ
Sbjct: 81 SMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQ 122
>TIGR_CMR|CPS_1540 [details] [associations]
symbol:CPS_1540 "ATP-dependent RNA helicase DbpA"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008150
"biological_process" evidence=ND] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0019843 "rRNA binding" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:YP_268282.1
ProteinModelPortal:Q485I3 STRING:Q485I3 GeneID:3521612
KEGG:cps:CPS_1540 PATRIC:21466289 OMA:THEKSTI
BioCyc:CPSY167879:GI48-1621-MONOMER Uniprot:Q485I3
Length = 468
Score = 154 (59.3 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 32/75 (42%), Positives = 44/75 (58%)
Query: 104 NPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVAT 163
N +F TKK+ + + AL + S + +HGD Q+DRD L F A ILVAT
Sbjct: 247 NQVESTAIFCNTKKETQQVADALHFDGFSVLALHGDLEQRDRDQTLLRFANKSASILVAT 306
Query: 164 DVAARGLDVEDVNTV 178
DVAARGLD++ ++ V
Sbjct: 307 DVAARGLDIDSLDLV 321
Score = 84 (34.6 bits), Expect = 3.7e-14, Sum P(2) = 3.7e-14
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALRNICIF---GGTPKGPQ 85
++V+ PTRELA Q+ ++ + + NI I GGTP GPQ
Sbjct: 81 SMVICPTRELADQVAKELRKLARGIHNIKILTLCGGTPFGPQ 122
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 192 (72.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 52/127 (40%), Positives = 74/127 (58%)
Query: 58 QQIQTVAKEF-SSALRNICI--FGGTPKGPQDCLPLHRFVFNCQ--YEMAKNPAF-KVIV 111
++IQ +A EF S + + GG + Q + VF + E+ +N + +V
Sbjct: 471 EEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILRNIGDERPMV 530
Query: 112 FVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARGLD 171
FVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAARGLD
Sbjct: 531 FVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLD 590
Query: 172 VEDVNTV 178
+E+V V
Sbjct: 591 IENVQHV 597
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 192 (72.6 bits), Expect = 4.5e-14, P = 4.5e-14
Identities = 52/127 (40%), Positives = 74/127 (58%)
Query: 58 QQIQTVAKEF-SSALRNICI--FGGTPKGPQDCLPLHRFVFNCQ--YEMAKNPAF-KVIV 111
++IQ +A EF S + + GG + Q + VF + E+ +N + +V
Sbjct: 471 EEIQRLAGEFLKSNYLFVAVGQVGGACRDVQQSILQVGPVFKKRKLVEILRNIGDERPMV 530
Query: 112 FVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARGLD 171
FVETKKK + I L +E+ S IHGD+ Q++R+ L DFR GK P+LVAT VAARGLD
Sbjct: 531 FVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFRCGKCPVLVATSVAARGLD 590
Query: 172 VEDVNTV 178
+E+V V
Sbjct: 591 IENVQHV 597
>ASPGD|ASPL0000014018 [details] [associations]
symbol:fal1 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:BN001302 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
EMBL:AACD01000139 KO:K13025 RefSeq:XP_681285.1
ProteinModelPortal:Q5AUL4 SMR:Q5AUL4 PRIDE:Q5AUL4
EnsemblFungi:CADANIAT00004036 GeneID:2869287 KEGG:ani:AN8016.2
OMA:EDWKFDT OrthoDB:EOG4HTD1W Uniprot:Q5AUL4
Length = 399
Score = 159 (61.0 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 27/71 (38%), Positives = 49/71 (69%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F T++KV+ +T +R + +HG+ Q++RD ++ DFRQG + +L++TDV A
Sbjct: 266 QAVIFCNTRRKVDWLTDKMREANFTVSSMHGEMPQKERDSIMQDFRQGNSRVLISTDVWA 325
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 326 RGIDVQQVSLV 336
Score = 72 (30.4 bits), Expect = 5.1e-14, Sum P(2) = 5.1e-14
Identities = 20/40 (50%), Positives = 26/40 (65%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGTPKG 83
ALVL+PTRELA QIQ+V ++ + + CI GGT G
Sbjct: 96 ALVLSPTRELATQIQSVIMALGDYMNVQCHACI-GGTNIG 134
>UNIPROTKB|E7EQG2 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 EMBL:AC112907 HGNC:HGNC:3284 ChiTaRS:EIF4A2
IPI:IPI00924536 ProteinModelPortal:E7EQG2 SMR:E7EQG2 PRIDE:E7EQG2
Ensembl:ENST00000425053 ArrayExpress:E7EQG2 Bgee:E7EQG2
Uniprot:E7EQG2
Length = 362
Score = 152 (58.6 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 24/71 (33%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 275 QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLA 334
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 335 RGIDVQQVSLV 345
Score = 81 (33.6 bits), Expect = 5.3e-14, Sum P(2) = 5.3e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 104 ALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGT 139
>GENEDB_PFALCIPARUM|PF08_0096 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative"
species:5833 "Plasmodium falciparum" [GO:0003724 "RNA helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 193 (73.0 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 48/126 (38%), Positives = 73/126 (57%)
Query: 58 QQIQTVAKEFSSALRNICI--FGGTPKGPQDCLPLHRFVFNCQYEM---AKNPAFKVIVF 112
++IQ +AKE+ + + G T + + L C Y + A+N I+F
Sbjct: 592 KEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNLLAENNNGLTILF 651
Query: 113 VETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARGLDV 172
VETK+K + I R L ++ +A+CIHGDK+Q +R+ L F++G ILVATDVAARGLD+
Sbjct: 652 VETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKRGIKNILVATDVAARGLDI 711
Query: 173 EDVNTV 178
++ V
Sbjct: 712 SNIKHV 717
>UNIPROTKB|Q8IAU1 [details] [associations]
symbol:PF08_0096 "RNA helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0003724 "RNA helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195 KO:K11594
HSSP:P10081 EMBL:AL844507 RefSeq:XP_001349420.1
ProteinModelPortal:Q8IAU1 IntAct:Q8IAU1 MINT:MINT-1660402
EnsemblProtists:PF08_0096:mRNA GeneID:2655295 KEGG:pfa:PF08_0096
EuPathDB:PlasmoDB:PF3D7_0810600 HOGENOM:HOG000280970 OMA:NNPFNNN
ProtClustDB:CLSZ2432713 Uniprot:Q8IAU1
Length = 941
Score = 193 (73.0 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 48/126 (38%), Positives = 73/126 (57%)
Query: 58 QQIQTVAKEFSSALRNICI--FGGTPKGPQDCLPLHRFVFNCQYEM---AKNPAFKVIVF 112
++IQ +AKE+ + + G T + + L C Y + A+N I+F
Sbjct: 592 KEIQVLAKEYLCKYTFLLVGKVGSTNEYIKQNLVFVEEENKCNYLLNLLAENNNGLTILF 651
Query: 113 VETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARGLDV 172
VETK+K + I R L ++ +A+CIHGDK+Q +R+ L F++G ILVATDVAARGLD+
Sbjct: 652 VETKRKADIIERFLSNQKLNAVCIHGDKSQDERERALKLFKRGIKNILVATDVAARGLDI 711
Query: 173 EDVNTV 178
++ V
Sbjct: 712 SNIKHV 717
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 159 (61.0 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V+VFVETK+ ++ L R++ ++ IHGD Q +R+ L FR G+ PILVAT VAAR
Sbjct: 401 VLVFVETKRGANELAYFLNRQQIRSVSIHGDLKQIERERNLELFRSGQCPILVATAVAAR 460
Query: 169 GLDVEDVNTV 178
GLD+ +V V
Sbjct: 461 GLDIPNVRHV 470
Score = 79 (32.9 bits), Expect = 5.5e-14, Sum P(2) = 5.5e-14
Identities = 19/37 (51%), Positives = 25/37 (67%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGG 79
P ALVL+PTRELA QI A +FS S ++ ++GG
Sbjct: 223 PCALVLSPTRELAIQIHKEATKFSYKSNIQTAILYGG 259
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 166 (63.5 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ IVF TKK+V+++ L ++A +HGD +Q++R + F+ GK +LVATDVAA
Sbjct: 241 QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA 300
Query: 168 RGLDVEDVNTV 178
RGLD+ DV+ V
Sbjct: 301 RGLDIPDVSHV 311
Score = 58 (25.5 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 39 VKQGDGPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGG 79
+++G L++ PTRELA Q+ + L R + ++GG
Sbjct: 64 IQRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGG 106
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 166 (63.5 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ IVF TKK+V+++ L ++A +HGD +Q++R + F+ GK +LVATDVAA
Sbjct: 241 QAIVFCRTKKRVDEVVEQLNFRGYAAKGLHGDMSQRERTQTIKSFKAGKTELLVATDVAA 300
Query: 168 RGLDVEDVNTV 178
RGLD+ DV+ V
Sbjct: 301 RGLDIPDVSHV 311
Score = 58 (25.5 bits), Expect = 5.9e-14, Sum P(2) = 5.9e-14
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 39 VKQGDGPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGG 79
+++G L++ PTRELA Q+ + L R + ++GG
Sbjct: 64 IQRGKKAQVLIVTPTRELALQVADEVAKLGKYLKVRALAVYGG 106
>POMBASE|SPBC17D1.06 [details] [associations]
symbol:dbp3 "ATP-dependent RNA helicase Dbp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000027
"ribosomal large subunit assembly" evidence=ISO] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=ISM]
[GO:0005730 "nucleolus" evidence=ISO;IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPBC17D1.06 GO:GO:0005524
GO:GO:0005730 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K14811 OrthoDB:EOG42JS0S
PIR:T39709 RefSeq:NP_596388.1 ProteinModelPortal:Q10202
STRING:Q10202 PRIDE:Q10202 EnsemblFungi:SPBC17D1.06.1
GeneID:2540213 KEGG:spo:SPBC17D1.06 OMA:DRILVFC NextBio:20801345
Uniprot:Q10202
Length = 578
Score = 164 (62.8 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 34/71 (47%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
K+++FV KK+ + L R +++ + IHGD +Q R LNDF+ GK P+LVATDVAA
Sbjct: 419 KILIFVLYKKEAARVEGTLAR-KYNVVGIHGDMSQGARLQALNDFKSGKCPVLVATDVAA 477
Query: 168 RGLDVEDVNTV 178
RGLD+ V V
Sbjct: 478 RGLDIPKVQLV 488
Score = 67 (28.6 bits), Expect = 6.6e-14, Sum P(2) = 6.6e-14
Identities = 16/43 (37%), Positives = 23/43 (53%)
Query: 45 PIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTPKGPQ 85
P LV++PTRELA Q + L+ + ++GG PK Q
Sbjct: 237 PRVLVVSPTRELAIQTYENLNSLIQGTNLKAVVVYGGAPKSEQ 279
>CGD|CAL0004832 [details] [associations]
symbol:orf19.7392 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] [GO:0006413 "translational initiation" evidence=IEA]
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:2000765 "regulation of cytoplasmic translation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0004832 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:AACQ01000066 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K11594 RefSeq:XP_716633.1
ProteinModelPortal:Q5A4E2 SMR:Q5A4E2 PRIDE:Q5A4E2 GeneID:3641752
KEGG:cal:CaO19.7392 Uniprot:Q5A4E2
Length = 672
Score = 156 (60.0 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 33/69 (47%), Positives = 46/69 (66%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
IVF ETK+ +++ L + A IHGD++Q +R+ L F+ G APILVAT VAARG
Sbjct: 447 IVFTETKRMADNLADYLYDQGFPATAIHGDRSQYEREKALAAFKNGAAPILVATAVAARG 506
Query: 170 LDVEDVNTV 178
LD+ +V+ V
Sbjct: 507 LDIPNVSHV 515
Score = 83 (34.3 bits), Expect = 7.0e-14, Sum P(2) = 7.0e-14
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
P LV+APTREL QI +K+FS S +R ++GG G Q
Sbjct: 270 PTILVMAPTRELVSQIYEESKKFSYRSWVRACVVYGGADIGQQ 312
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 150 (57.9 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 29/70 (41%), Positives = 45/70 (64%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
VI+FV KK + + + L + +++ +HG K Q+ R+Y L + G ILVATDVA R
Sbjct: 669 VIIFVNQKKGADVLAKGLEKLGYNSCTLHGGKGQEQREYALAALKSGAKDILVATDVAGR 728
Query: 169 GLDVEDVNTV 178
G+D++DV+ V
Sbjct: 729 GIDIKDVSLV 738
Score = 94 (38.1 bits), Expect = 7.1e-14, Sum P(2) = 7.1e-14
Identities = 23/55 (41%), Positives = 31/55 (56%)
Query: 33 ISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGGTPKGPQ 85
I E V QG P A+++APTRELAQQI+ +F L R + + GG + Q
Sbjct: 462 IERLEDVDQG--PYAIIMAPTRELAQQIEEETTKFGQPLGIRTVVVVGGLSREEQ 514
>UNIPROTKB|Q4K8U0 [details] [associations]
symbol:deaD "Cold-shock DEAD box protein A" species:220664
"Pseudomonas protegens Pf-5" [GO:0003723 "RNA binding"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0006950 "response to stress"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0006950
GO:GO:0006355 GO:GO:0003723 EMBL:CP000076 GenomeReviews:CP000076_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580 Pfam:PF03880
OMA:LPQGMPK RefSeq:YP_261343.1 ProteinModelPortal:Q4K8U0
GeneID:3477377 KEGG:pfl:PFL_4251 PATRIC:19877913
ProtClustDB:CLSK867560 BioCyc:PFLU220664:GIX8-4286-MONOMER
Uniprot:Q4K8U0
Length = 557
Score = 141 (54.7 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
+I+FV TK+ D+ AL + + A ++GD Q R+ V++ + G+ I+VATDVAAR
Sbjct: 248 LIMFVRTKQATLDLASALEAKGYKAAALNGDIAQNQRERVIDSLKDGRLDIVVATDVAAR 307
Query: 169 GLDVEDVNTV 178
GLDV + V
Sbjct: 308 GLDVPRITHV 317
Score = 101 (40.6 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 30 AVHISHQ-EPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNI---CIFGGTPKGPQ 85
A+ I H+ +P K+ P AL+LAPTRELA Q+ T + ++ + + ++GG P GPQ
Sbjct: 61 ALPILHRIDPSKRE--PQALILAPTRELALQVATAFETYAKQMPGVTVVAVYGGAPMGPQ 118
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 148 (57.2 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 29/70 (41%), Positives = 44/70 (62%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
+I+FV KK + +++ L + +HG K Q R+Y L ++G + ILVATDVA R
Sbjct: 576 IIIFVNQKKGADMLSKGLTKLGFKPTVLHGGKGQDQREYALQALKEGTSDILVATDVAGR 635
Query: 169 GLDVEDVNTV 178
G+DV+DV+ V
Sbjct: 636 GIDVKDVSLV 645
Score = 95 (38.5 bits), Expect = 8.0e-14, Sum P(2) = 8.0e-14
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 25 YMLPAAVHISHQEPVKQGD----GPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFG 78
++LP V I+ +++ + GP A+++APTRELAQQI+ +F L + + + G
Sbjct: 355 FLLPLLVWITSLPKMERQEHRDLGPYAIIMAPTRELAQQIEEETNKFGKLLGIKTVSVIG 414
Query: 79 GTPKGPQ 85
G + Q
Sbjct: 415 GASREDQ 421
>UNIPROTKB|Q8JFP1 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 OMA:TENDARQ EMBL:AF515726
EMBL:AJ720280 IPI:IPI00588868 RefSeq:NP_989880.1 UniGene:Gga.4580
ProteinModelPortal:Q8JFP1 SMR:Q8JFP1 STRING:Q8JFP1 PRIDE:Q8JFP1
Ensembl:ENSGALT00000014135 Ensembl:ENSGALT00000039726 GeneID:395232
KEGG:gga:395232 InParanoid:Q8JFP1 NextBio:20815321
ArrayExpress:Q8JFP1 Uniprot:Q8JFP1
Length = 407
Score = 152 (58.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 24/71 (33%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 275 QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLA 334
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 335 RGIDVQQVSLV 345
Score = 81 (33.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 104 ALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGT 139
>UNIPROTKB|Q3SZ65 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9913 "Bos taurus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG107989 GeneTree:ENSGT00530000062880 KO:K03257
OrthoDB:EOG4640C1 EMBL:BC103106 IPI:IPI00711238
RefSeq:NP_001029216.1 UniGene:Bt.13925 ProteinModelPortal:Q3SZ65
SMR:Q3SZ65 STRING:Q3SZ65 PRIDE:Q3SZ65 Ensembl:ENSBTAT00000019596
GeneID:286819 KEGG:bta:286819 CTD:1974 InParanoid:Q3SZ65
OMA:TENDARQ NextBio:20806473 ArrayExpress:Q3SZ65 Uniprot:Q3SZ65
Length = 407
Score = 152 (58.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 24/71 (33%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 275 QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLA 334
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 335 RGIDVQQVSLV 345
Score = 81 (33.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 104 ALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGT 139
>UNIPROTKB|E2R3J1 [details] [associations]
symbol:EIF4A2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:AAEX03017297 RefSeq:XP_860499.2 ProteinModelPortal:E2R3J1
SMR:E2R3J1 PRIDE:E2R3J1 Ensembl:ENSCAFT00000021683 GeneID:488118
KEGG:cfa:488118 NextBio:20861546 Uniprot:E2R3J1
Length = 407
Score = 152 (58.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 24/71 (33%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 275 QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLA 334
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 335 RGIDVQQVSLV 345
Score = 81 (33.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 104 ALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGT 139
>UNIPROTKB|Q14240 [details] [associations]
symbol:EIF4A2 "Eukaryotic initiation factor 4A-II"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003743 "translation initiation factor
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0004386
"helicase activity" evidence=TAS] [GO:0006446 "regulation of
translational initiation" evidence=TAS] [GO:0016281 "eukaryotic
translation initiation factor 4F complex" evidence=TAS] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0006412 "translation"
evidence=TAS] [GO:0006413 "translational initiation" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016070 "RNA
metabolic process" evidence=TAS] [GO:0016071 "mRNA metabolic
process" evidence=TAS] [GO:0019221 "cytokine-mediated signaling
pathway" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_71 Reactome:REACT_21257 Reactome:REACT_17015
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_6900
GO:GO:0019048 GO:GO:0006446 GO:GO:0016281 EMBL:CH471052
GO:GO:0019221 GO:GO:0004386 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 GO:GO:0000289
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG107989 Reactome:REACT_1762 KO:K03257
CTD:1974 OMA:TENDARQ EMBL:D30655 EMBL:BT009860 EMBL:AC112907
EMBL:BC012547 EMBL:BC013708 EMBL:BC015842 EMBL:BC048105
IPI:IPI00328328 IPI:IPI00409717 RefSeq:NP_001958.2
UniGene:Hs.518475 UniGene:Hs.599481 PDB:3BOR PDBsum:3BOR
ProteinModelPortal:Q14240 SMR:Q14240 IntAct:Q14240 MINT:MINT-202114
STRING:Q14240 PhosphoSite:Q14240 DMDM:45645183 PaxDb:Q14240
PRIDE:Q14240 DNASU:1974 Ensembl:ENST00000323963
Ensembl:ENST00000440191 GeneID:1974 KEGG:hsa:1974 UCSC:uc003fqs.3
UCSC:uc003fqu.3 GeneCards:GC03P186539 H-InvDB:HIX0003899
HGNC:HGNC:3284 HPA:CAB011690 MIM:601102 neXtProt:NX_Q14240
PharmGKB:PA27712 InParanoid:Q14240 PhylomeDB:Q14240 ChiTaRS:EIF4A2
EvolutionaryTrace:Q14240 GenomeRNAi:1974 NextBio:7991
PMAP-CutDB:Q14240 ArrayExpress:Q14240 Bgee:Q14240 CleanEx:HS_EIF4A2
Genevestigator:Q14240 GermOnline:ENSG00000156976 Uniprot:Q14240
Length = 407
Score = 152 (58.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 24/71 (33%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 275 QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLA 334
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 335 RGIDVQQVSLV 345
Score = 81 (33.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 104 ALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGT 139
>UNIPROTKB|A6M930 [details] [associations]
symbol:EIF4A2 "Eukaryotic translation initiation factor 4A
isoform 2" species:9823 "Sus scrofa" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003743 "translation initiation factor activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 CTD:1974 OMA:TENDARQ
EMBL:CU633961 EMBL:DQ351285 RefSeq:NP_001093665.1 UniGene:Ssc.10843
ProteinModelPortal:A6M930 SMR:A6M930 PRIDE:A6M930
Ensembl:ENSSSCT00000012915 GeneID:100101928 KEGG:ssc:100101928
Uniprot:A6M930
Length = 407
Score = 152 (58.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 24/71 (33%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 275 QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLA 334
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 335 RGIDVQQVSLV 345
Score = 81 (33.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 104 ALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGT 139
>MGI|MGI:106906 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006412 "translation" evidence=IEA] [GO:0006413 "translational
initiation" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106906 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K03257 OrthoDB:EOG4640C1 CTD:1974
OMA:TENDARQ EMBL:X12507 EMBL:X14422 EMBL:X56953 EMBL:AK076509
EMBL:U64706 IPI:IPI00400432 IPI:IPI00409918 PIR:S00985
RefSeq:NP_038534.2 UniGene:Mm.260084 ProteinModelPortal:P10630
SMR:P10630 IntAct:P10630 STRING:P10630 PhosphoSite:P10630
PaxDb:P10630 PRIDE:P10630 Ensembl:ENSMUST00000023599
Ensembl:ENSMUST00000115341 GeneID:13682 KEGG:mmu:13682
NextBio:284442 Bgee:P10630 CleanEx:MM_EIF4A2 Genevestigator:P10630
GermOnline:ENSMUSG00000022884 Uniprot:P10630
Length = 407
Score = 152 (58.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 24/71 (33%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 275 QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLA 334
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 335 RGIDVQQVSLV 345
Score = 81 (33.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 104 ALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGT 139
>RGD|1309225 [details] [associations]
symbol:Eif4a2 "eukaryotic translation initiation factor 4A2"
species:10116 "Rattus norvegicus" [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309225 GO:GO:0005524
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG107989 HSSP:P60842
KO:K03257 OrthoDB:EOG4640C1 CTD:1974 EMBL:BC085859 IPI:IPI00193595
RefSeq:NP_001008336.1 UniGene:Rn.143972 ProteinModelPortal:Q5RKI1
SMR:Q5RKI1 STRING:Q5RKI1 PhosphoSite:Q5RKI1
World-2DPAGE:0004:Q5RKI1 PRIDE:Q5RKI1 GeneID:303831 KEGG:rno:303831
UCSC:RGD:1309225 InParanoid:Q5RKI1 NextBio:652169
ArrayExpress:Q5RKI1 Genevestigator:Q5RKI1
GermOnline:ENSRNOG00000001815 Uniprot:Q5RKI1
Length = 407
Score = 152 (58.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 24/71 (33%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 275 QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLA 334
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 335 RGIDVQQVSLV 345
Score = 81 (33.6 bits), Expect = 8.7e-14, Sum P(2) = 8.7e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 104 ALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGT 139
>UNIPROTKB|F8WFX2 [details] [associations]
symbol:Eif4a2 "Eukaryotic initiation factor 4A-II"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1309225 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00530000062880
OMA:TENDARQ IPI:IPI00193595 ProteinModelPortal:F8WFX2 PRIDE:F8WFX2
Ensembl:ENSRNOT00000002484 Uniprot:F8WFX2
Length = 408
Score = 152 (58.6 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 24/71 (33%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F+ T++KV+ +T + + +HGD Q++RD ++ +FR G + +L+ TD+ A
Sbjct: 276 QAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTDLLA 335
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 336 RGIDVQQVSLV 346
Score = 81 (33.6 bits), Expect = 8.8e-14, Sum P(2) = 8.8e-14
Identities = 22/37 (59%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
ALVLAPTRELAQQIQ V ++ A + CI GGT
Sbjct: 105 ALVLAPTRELAQQIQKVILALGDYMGATCHACI-GGT 140
>TIGR_CMR|GSU_0189 [details] [associations]
symbol:GSU_0189 "ATP-dependent RNA helicase DbpA"
species:243231 "Geobacter sulfurreducens PCA" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE017180 GenomeReviews:AE017180_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591 ProtClustDB:PRK11776
InterPro:IPR005580 Pfam:PF03880 RefSeq:NP_951250.1
ProteinModelPortal:Q74GQ7 GeneID:2687824 KEGG:gsu:GSU0189
PATRIC:22023124 OMA:VAIASHC BioCyc:GSUL243231:GH27-128-MONOMER
Uniprot:Q74GQ7
Length = 460
Score = 154 (59.3 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 30/69 (43%), Positives = 47/69 (68%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++F TK + +++ AL ++A+ IHGD Q++RD VL F A +LVATDVAARG
Sbjct: 246 LIFCNTKLECQEVANALAVRGYAALAIHGDLDQRERDRVLVRFANRSASVLVATDVAARG 305
Query: 170 LDVEDVNTV 178
LD+++++ V
Sbjct: 306 LDIKELSAV 314
Score = 80 (33.2 bits), Expect = 9.1e-14, Sum P(2) = 9.1e-14
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 47 ALVLAPTRELAQQIQTVAKE---FSSALRNICIFGGTPKGPQ 85
ALVL PTRELA Q+ + F+ ++ + I GG P GPQ
Sbjct: 75 ALVLCPTRELADQVGKELRRLARFTDNIKILTICGGVPFGPQ 116
>RGD|1307306 [details] [associations]
symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box helicase 21"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003725 "double-stranded RNA binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0009615 "response to virus" evidence=ISO] [GO:0043330 "response
to exogenous dsRNA" evidence=ISO] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:1307306 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OrthoDB:EOG46143T EMBL:BC105878 IPI:IPI00198801
RefSeq:NP_001032278.1 UniGene:Rn.162310 ProteinModelPortal:Q3B8Q1
STRING:Q3B8Q1 PhosphoSite:Q3B8Q1 PRIDE:Q3B8Q1
Ensembl:ENSRNOT00000068184 GeneID:317399 KEGG:rno:317399
UCSC:RGD:1307306 NextBio:671745 Genevestigator:Q3B8Q1
Uniprot:Q3B8Q1
Length = 782
Score = 139 (54.0 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 108 KVIVFVETKKKVEDITR--ALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDV 165
+ I+F ETKK +++++ ++++ S +HGD Q+ R+ L FR G +LVAT+V
Sbjct: 436 RTIIFCETKKDAQELSQNTCIKQDAQS---LHGDIPQKQREITLKGFRNGNFGVLVATNV 492
Query: 166 AARGLDVEDVNTV 178
AARGLD+ +V+ V
Sbjct: 493 AARGLDIPEVDLV 505
Score = 106 (42.4 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGTPKGPQ 85
K+G P LVLAPTRELA Q+ + + L C +GGTP G Q
Sbjct: 252 KRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQ 297
>CGD|CAL0004095 [details] [associations]
symbol:TIF species:5476 "Candida albicans" [GO:0003743
"translation initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0016281 "eukaryotic translation initiation factor 4F complex"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095 GO:GO:0005524
GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045 EMBL:AACQ01000042
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K03257
EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 163 (62.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 31/90 (34%), Positives = 55/90 (61%)
Query: 90 LHRFVFNCQYEMAKNPAF-KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYV 148
L + F+C ++ + + + ++F T+ KVE +T LR + + IH D Q +RD +
Sbjct: 245 LEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTI 304
Query: 149 LNDFRQGKAPILVATDVAARGLDVEDVNTV 178
+ +FR G + IL++TD+ ARG+DV+ V+ V
Sbjct: 305 MKEFRSGSSRILISTDLLARGIDVQQVSLV 334
Score = 61 (26.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Query: 47 ALVLAPTRELAQQIQTV 63
AL+LAPTRELA QI+ V
Sbjct: 94 ALILAPTRELALQIKNV 110
>UNIPROTKB|P87206 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:237561 "Candida albicans SC5314" [GO:0003743 "translation
initiation factor activity" evidence=ISS] [GO:0006413
"translational initiation" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0004095
GO:GO:0005524 GO:GO:0005737 GO:GO:0003743 EMBL:AACQ01000045
EMBL:AACQ01000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K03257 EMBL:D84472 RefSeq:XP_718147.1 RefSeq:XP_718416.1
ProteinModelPortal:P87206 STRING:P87206 PRIDE:P87206 GeneID:3639917
GeneID:3640190 KEGG:cal:CaO19.10834 KEGG:cal:CaO19.3324
Uniprot:P87206
Length = 397
Score = 163 (62.4 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 31/90 (34%), Positives = 55/90 (61%)
Query: 90 LHRFVFNCQYEMAKNPAF-KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYV 148
L + F+C ++ + + + ++F T+ KVE +T LR + + IH D Q +RD +
Sbjct: 245 LEDYKFDCLCDLYDSISVTQAVIFCNTRSKVEFLTNKLREQHFTVSAIHADLPQAERDTI 304
Query: 149 LNDFRQGKAPILVATDVAARGLDVEDVNTV 178
+ +FR G + IL++TD+ ARG+DV+ V+ V
Sbjct: 305 MKEFRSGSSRILISTDLLARGIDVQQVSLV 334
Score = 61 (26.5 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 13/17 (76%), Positives = 15/17 (88%)
Query: 47 ALVLAPTRELAQQIQTV 63
AL+LAPTRELA QI+ V
Sbjct: 94 ALILAPTRELALQIKNV 110
>MGI|MGI:1860494 [details] [associations]
symbol:Ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 21"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003725 "double-stranded RNA binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005730 "nucleolus" evidence=ISS] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0008152 "metabolic process"
evidence=ISS] [GO:0009615 "response to virus" evidence=IMP]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043330
"response to exogenous dsRNA" evidence=IMP] InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1860494 GO:GO:0005524 GO:GO:0005730 EMBL:CH466553
GO:GO:0009615 GO:GO:0003725 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0043330 eggNOG:COG0513
GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00680000100003 CTD:9188 HOGENOM:HOG000268805
HOVERGEN:HBG051331 OMA:EILCVAY OrthoDB:EOG46143T EMBL:AF220365
EMBL:AF159131 EMBL:AK160095 EMBL:BC043655 IPI:IPI00120691
RefSeq:NP_062426.2 UniGene:Mm.413275 ProteinModelPortal:Q9JIK5
SMR:Q9JIK5 DIP:DIP-48574N IntAct:Q9JIK5 STRING:Q9JIK5
PhosphoSite:Q9JIK5 PaxDb:Q9JIK5 PRIDE:Q9JIK5
Ensembl:ENSMUST00000045866 GeneID:56200 KEGG:mmu:56200
InParanoid:Q3TVJ3 NextBio:312026 Bgee:Q9JIK5 CleanEx:MM_DDX21
Genevestigator:Q9JIK5 GermOnline:ENSMUSG00000020075 Uniprot:Q9JIK5
Length = 851
Score = 139 (54.0 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 29/73 (39%), Positives = 48/73 (65%)
Query: 108 KVIVFVETKKKVEDITR--ALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDV 165
+ I+F ETKK +++++ ++++ S +HGD Q+ R+ L FR G +LVAT+V
Sbjct: 512 RTIIFCETKKDAQELSQNTCIKQDAQS---LHGDIPQKQREITLKGFRNGNFGVLVATNV 568
Query: 166 AARGLDVEDVNTV 178
AARGLD+ +V+ V
Sbjct: 569 AARGLDIPEVDLV 581
Score = 106 (42.4 bits), Expect = 1.4e-13, Sum P(2) = 1.4e-13
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGTPKGPQ 85
K+G P LVLAPTRELA Q+ + + L C +GGTP G Q
Sbjct: 328 KRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQ 373
>ASPGD|ASPL0000069536 [details] [associations]
symbol:AN7424 species:162425 "Emericella nidulans"
[GO:0000464 "endonucleolytic cleavage in ITS1 upstream of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003723 EMBL:AACD01000129 EMBL:BN001304 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268804 KO:K14811 RefSeq:XP_680693.1
GeneID:2869574 KEGG:ani:AN7424.2 OrthoDB:EOG42JS0S Uniprot:Q5AWA6
Length = 488
Score = 145 (56.1 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 34/74 (45%), Positives = 44/74 (59%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
KV+ F KK+ + R LR + IHGD +QQ+R L F+ G A +LVATDVAA
Sbjct: 325 KVLAFCLYKKEAMRVERLLRTKGFKVAGIHGDLSQQERFRSLEAFKSGAATVLVATDVAA 384
Query: 168 RGLDVEDVN-TVNI 180
RGLD+ V VN+
Sbjct: 385 RGLDIPHVKLVVNV 398
Score = 86 (35.3 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGTPKGPQ 85
P+A+V++PTRELA QI +F+ ++ CIFGG K Q
Sbjct: 147 PLAVVISPTRELAMQIYDQLVKFAEKVDIQVACIFGGVKKDEQ 189
Score = 73 (30.8 bits), Expect = 0.00015, Sum P(3) = 0.00015
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 177 TVNIG---SLQLSANHNISQVIEVVQDYEKEKRLFSLI 211
TV IG S AN I QV+EVV+ +EKE+RL ++
Sbjct: 278 TVTIGGDPSADPRANSRIKQVVEVVKPHEKEQRLVQIL 315
Score = 36 (17.7 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 11/36 (30%), Positives = 18/36 (50%)
Query: 3 PPSES-GCQNFSKITNYLLSPPQYMLPAAVHISHQE 37
P +S G ++ K T +SPP + PA ++ E
Sbjct: 15 PSKKSKGTKDTKKNTE--VSPPYFQSPALDNVPQTE 48
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 151 (58.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 100 EMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPI 159
EM + P +IVFV KK + I++++ + ++ A+ +HG K Q+ R+ L+ F+ + I
Sbjct: 964 EMYEPP---IIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDI 1020
Query: 160 LVATDVAARGLDVEDVNTV 178
LVATDVA RG+DV V V
Sbjct: 1021 LVATDVAGRGIDVHGVKLV 1039
Score = 92 (37.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 25 YMLPAAVHISHQEPVK---QGDGPIALVLAPTRELAQQIQTVAKEFSS--ALRNICIFGG 79
++LP ++ P+ DGP ALV+AP+RELA QI +F+S + R + + GG
Sbjct: 752 FVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGG 811
Score = 46 (21.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 72 RNICIFGGTPKGPQDCLPLHRFVFN-CQY 99
R + I GTP QDCL V N C Y
Sbjct: 823 RGVEIVIGTPGRLQDCLEKAYTVLNQCNY 851
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 151 (58.2 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 32/79 (40%), Positives = 50/79 (63%)
Query: 100 EMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPI 159
EM + P +IVFV KK + I++++ + ++ A+ +HG K Q+ R+ L+ F+ + I
Sbjct: 964 EMYEPP---IIVFVNQKKVADIISKSITKMKYKAVALHGGKAQEIREQTLSAFKNAEFDI 1020
Query: 160 LVATDVAARGLDVEDVNTV 178
LVATDVA RG+DV V V
Sbjct: 1021 LVATDVAGRGIDVHGVKLV 1039
Score = 92 (37.4 bits), Expect = 1.8e-13, Sum P(2) = 1.8e-13
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 25 YMLPAAVHISHQEPVK---QGDGPIALVLAPTRELAQQIQTVAKEFSS--ALRNICIFGG 79
++LP ++ P+ DGP ALV+AP+RELA QI +F+S + R + + GG
Sbjct: 752 FVLPMLSYVKQLPPLTYETSQDGPYALVIAPSRELAIQIYEETNKFASYCSCRTVAVVGG 811
Score = 46 (21.3 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 72 RNICIFGGTPKGPQDCLPLHRFVFN-CQY 99
R + I GTP QDCL V N C Y
Sbjct: 823 RGVEIVIGTPGRLQDCLEKAYTVLNQCNY 851
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 130 (50.8 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 31/79 (39%), Positives = 44/79 (55%)
Query: 101 MAKNPAFKVIVFVETKKKVEDITRALRRERH-SAICIHGDKTQQDRDYVLNDFRQGKAPI 159
+ +P VIVF K K +D L +++ +I +H K Q+ R+ L FR + I
Sbjct: 355 LTADPTNTVIVFCNEKYKCDDFQHYLSTQKNVKSIVLHSGKDQRMRESGLKLFRDHRIRI 414
Query: 160 LVATDVAARGLDVEDVNTV 178
L+ATDVAARGLD+ V V
Sbjct: 415 LIATDVAARGLDIPSVKAV 433
Score = 111 (44.1 bits), Expect = 2.3e-13, Sum P(2) = 2.3e-13
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 25 YMLPAAVHI-SHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEF--SSALRNICIFGGTP 81
++LPA + I S + G P+ LV+APTRELAQQI+ V K +++R +C +GG
Sbjct: 164 FLLPALLKIISLPKRPSYGATPLVLVMAPTRELAQQIEEVCKTSIRGTSIRQLCAYGGLG 223
Query: 82 K 82
K
Sbjct: 224 K 224
Score = 44 (20.5 bits), Expect = 0.00039, Sum P(2) = 0.00039
Identities = 12/57 (21%), Positives = 31/57 (54%)
Query: 172 VEDVNTVNIGSLQLSANHNISQVIEVVQDYEKEKRLFSLIRELGKYTLITQESSSTL 228
++D + +GS +L+ + N++Q I + D + + E+ K ++T + ++T+
Sbjct: 309 LKDPIKITVGSQELTGSINVTQHIVNIDDLSDLQSDDLIYDEINK--ILTADPTNTV 363
>POMBASE|SPAC1F5.10 [details] [associations]
symbol:SPAC1F5.10 "ATP-dependent RNA helicase
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC1F5.10 GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 OMA:EDWKFDT
OrthoDB:EOG4HTD1W PIR:T38085 RefSeq:NP_592863.1
ProteinModelPortal:Q10055 SMR:Q10055 PRIDE:Q10055
EnsemblFungi:SPAC1F5.10.1 GeneID:2541602 KEGG:spo:SPAC1F5.10
NextBio:20802696 Uniprot:Q10055
Length = 394
Score = 156 (60.0 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 25/71 (35%), Positives = 48/71 (67%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F +++KV+ +T +R + +HG+ Q++RD ++ DFRQG + +L+ TD+ A
Sbjct: 262 QAVIFCNSRRKVDWLTEKMREANFTVTSMHGEMPQKERDAIMQDFRQGNSRVLICTDIWA 321
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 322 RGIDVQQVSLV 332
Score = 70 (29.7 bits), Expect = 2.5e-13, Sum P(2) = 2.5e-13
Identities = 18/39 (46%), Positives = 21/39 (53%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALRNIC--IFGGTPKG 83
AL+L+PTRELA QIQ V + C GGT G
Sbjct: 92 ALILSPTRELAVQIQNVVLALGDHMNVQCHACIGGTSVG 130
>UNIPROTKB|B4E132 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
HOGENOM:HOG000268804 HOVERGEN:HBG015893 UniGene:Hs.99120
HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK303638 IPI:IPI00908506
ProteinModelPortal:B4E132 SMR:B4E132 STRING:B4E132
Ensembl:ENST00000420730 Uniprot:B4E132
Length = 407
Score = 180 (68.4 bits), Expect = 3.0e-13, P = 3.0e-13
Identities = 36/69 (52%), Positives = 49/69 (71%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VFVETKK + + L E ++ IHGD++Q+DR+ L+ FR GK+PILVAT VAARG
Sbjct: 190 LVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRSGKSPILVATAVAARG 249
Query: 170 LDVEDVNTV 178
LD+ +V V
Sbjct: 250 LDISNVRHV 258
>TIGR_CMR|CPS_1590 [details] [associations]
symbol:CPS_1590 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_268332.1 ProteinModelPortal:Q485D3
STRING:Q485D3 GeneID:3522084 KEGG:cps:CPS_1590 PATRIC:21466379
OMA:AISECGY ProtClustDB:CLSK768209
BioCyc:CPSY167879:GI48-1671-MONOMER Uniprot:Q485D3
Length = 455
Score = 153 (58.9 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+V+VF TK+ + + L+ + A HGDKTQ R+ L F +GK +LVATDVAA
Sbjct: 263 QVLVFAGTKESANTLAKELKLDGIKAALCHGDKTQGARNKALEQFSEGKVRVLVATDVAA 322
Query: 168 RGLDVEDV 175
RGLD+ D+
Sbjct: 323 RGLDIPDL 330
Score = 76 (31.8 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 19/48 (39%), Positives = 27/48 (56%)
Query: 34 SHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGG 79
S +E G AL+L PTRELA Q+ K+FS L ++ ++GG
Sbjct: 81 SAEEKSASGQAIRALILTPTRELANQVADNIKQFSQYLPIKSGVVYGG 128
>UNIPROTKB|Q4K4H4 [details] [associations]
symbol:rhlE_2 "Putative ATP-dependent RNA helicase"
species:220664 "Pseudomonas protegens Pf-5" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006139 GO:GO:0003676
EMBL:CP000076 GenomeReviews:CP000076_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:DGDLMGF ProtClustDB:CLSK865855 RefSeq:YP_262859.1
ProteinModelPortal:Q4K4H4 GeneID:3480173 KEGG:pfl:PFL_5801
PATRIC:19881109 BioCyc:PFLU220664:GIX8-5841-MONOMER Uniprot:Q4K4H4
Length = 622
Score = 149 (57.5 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 32/73 (43%), Positives = 46/73 (63%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+V+VF TK + L + SA+ IHG+K+Q R L DF+ G+ ILVATD+AA
Sbjct: 251 QVLVFTRTKHGANRLAEYLDKHGLSAVAIHGNKSQNARTKALADFKAGEVRILVATDIAA 310
Query: 168 RGLDVEDV-NTVN 179
RGLD++ + + VN
Sbjct: 311 RGLDIDQLPHVVN 323
Score = 86 (35.3 bits), Expect = 3.2e-13, Sum P(2) = 3.2e-13
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFSSALRNI--CIFGGTPKGPQ 85
P LVL PTRELA Q+ K ++ L+ + CIFGG PQ
Sbjct: 80 PRVLVLTPTRELAAQVHDSFKLYARDLKFVSACIFGGVGMNPQ 122
>UNIPROTKB|P21693 [details] [associations]
symbol:dbpA species:83333 "Escherichia coli K-12"
[GO:0003724 "RNA helicase activity" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0033677 "DNA/RNA helicase
activity" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0000027 "ribosomal large subunit assembly" evidence=IMP]
[GO:0034459 "ATP-dependent 3'-5' RNA helicase activity"
evidence=IDA] [GO:0019843 "rRNA binding" evidence=IDA] [GO:0043531
"ADP binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0043531
GO:GO:0019843 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:X52647 PIR:B64884 RefSeq:NP_415859.1 RefSeq:YP_489613.1
ProteinModelPortal:P21693 SMR:P21693 IntAct:P21693 PRIDE:P21693
EnsemblBacteria:EBESCT00000004879 EnsemblBacteria:EBESCT00000014318
GeneID:12933991 GeneID:947153 KEGG:ecj:Y75_p1320 KEGG:eco:b1343
PATRIC:32117966 EchoBASE:EB0206 EcoGene:EG10210
HOGENOM:HOG000268809 KO:K05591 OMA:HIDPARF ProtClustDB:PRK11776
BioCyc:EcoCyc:EG10210-MONOMER BioCyc:ECOL316407:JW1337-MONOMER
BioCyc:MetaCyc:EG10210-MONOMER Genevestigator:P21693 GO:GO:0034459
GO:GO:0033677 InterPro:IPR005580 Pfam:PF03880 Uniprot:P21693
Length = 457
Score = 158 (60.7 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 33/69 (47%), Positives = 43/69 (62%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VF TKK + + AL SA+ +HGD Q+DRD L F G A +LVATDVAARG
Sbjct: 245 VVFCNTKKDCQAVCDALNEVGQSALSLHGDLEQRDRDQTLVRFANGSARVLVATDVAARG 304
Query: 170 LDVEDVNTV 178
LD++ + V
Sbjct: 305 LDIKSLELV 313
Score = 68 (29.0 bits), Expect = 3.3e-13, Sum P(2) = 3.3e-13
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALRN---ICIFGGTPKGPQ 85
ALVL PTRELA Q+ + + L N + + GG P G Q
Sbjct: 74 ALVLCPTRELADQVAGELRRLARFLPNTKILTLCGGQPFGMQ 115
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 141 (54.7 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 29/71 (40%), Positives = 43/71 (60%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
IVFV TKK + I + L + + +HG K+Q+ R+ L FR + +LVATDV RG
Sbjct: 580 IVFVNTKKNCDSIAKNLDKAGYRVTTLHGGKSQEQREISLEGFRAKRYNVLVATDVVGRG 639
Query: 170 LDVEDV-NTVN 179
+D+ DV + +N
Sbjct: 640 IDIPDVAHVIN 650
Score = 98 (39.6 bits), Expect = 3.5e-13, Sum P(2) = 3.5e-13
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 25 YMLPAAVHISHQEPVKQG---DGPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGG 79
++LP +IS P+ + +GP A+V+APTRELAQQI+ +F+ L R I GG
Sbjct: 367 FVLPMLAYISRLPPMSEENETEGPYAVVMAPTRELAQQIEEETVKFAHYLGFRVTSIVGG 426
>FB|FBgn0037573 [details] [associations]
symbol:eIF4AIII "eIF4AIII" species:7227 "Drosophila
melanogaster" [GO:0016281 "eukaryotic translation initiation factor
4F complex" evidence=ISS] [GO:0003743 "translation initiation
factor activity" evidence=ISS] [GO:0006413 "translational
initiation" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0045451 "pole plasm
oskar mRNA localization" evidence=IGI] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0071011 "precatalytic spliceosome" evidence=IDA] [GO:0071013
"catalytic step 2 spliceosome" evidence=IDA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IC] [GO:0006974 "response to
DNA damage stimulus" evidence=IMP] [GO:0008380 "RNA splicing"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0016281
GO:GO:0006974 GO:GO:0003743 GO:GO:0071011 GO:GO:0000398
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045451 GO:GO:0045495 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 ChiTaRS:EIF4A3
EMBL:AY089635 ProteinModelPortal:Q8SXH3 SMR:Q8SXH3 IntAct:Q8SXH3
STRING:Q8SXH3 PaxDb:Q8SXH3 PRIDE:Q8SXH3 FlyBase:FBgn0037573
InParanoid:Q8SXH3 OrthoDB:EOG4XWDD6 Bgee:Q8SXH3 Uniprot:Q8SXH3
Length = 399
Score = 158 (60.7 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 27/71 (38%), Positives = 48/71 (67%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ +T +R + +HGD Q++RD ++ +FR G++ +L+ TDV A
Sbjct: 267 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERDEIMKEFRAGQSRVLITTDVWA 326
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 327 RGIDVQQVSLV 337
Score = 64 (27.6 bits), Expect = 5.0e-13, Sum P(2) = 5.0e-13
Identities = 18/39 (46%), Positives = 22/39 (56%)
Query: 48 LVLAPTRELAQQIQTVAKEFSSALR---NICIFGGTPKG 83
L L+PTRELA QIQ V + ++CI GGT G
Sbjct: 98 LCLSPTRELAVQIQKVILALGDMMNVQCHVCI-GGTNLG 135
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 161 (61.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 30/87 (34%), Positives = 57/87 (65%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+V+VF TK+ +D+ + + ++ ++ IHGDK+Q R+ L++F++GK L+ATDVAA
Sbjct: 248 QVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAA 307
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQV 194
RG+D++ ++ V L +A + ++
Sbjct: 308 RGIDIKGLSHVINYELPYNAEDYVHRI 334
Score = 59 (25.8 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 47 ALVLAPTRELAQQI 60
ALVL PTRELAQQ+
Sbjct: 79 ALVLTPTRELAQQV 92
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 161 (61.7 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 30/87 (34%), Positives = 57/87 (65%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+V+VF TK+ +D+ + + ++ ++ IHGDK+Q R+ L++F++GK L+ATDVAA
Sbjct: 248 QVLVFTRTKQCADDLAKEMTKDGVKSLAIHGDKSQGAREKALHEFKEGKVRALIATDVAA 307
Query: 168 RGLDVEDVNTVNIGSLQLSANHNISQV 194
RG+D++ ++ V L +A + ++
Sbjct: 308 RGIDIKGLSHVINYELPYNAEDYVHRI 334
Score = 59 (25.8 bits), Expect = 5.8e-13, Sum P(2) = 5.8e-13
Identities = 12/14 (85%), Positives = 13/14 (92%)
Query: 47 ALVLAPTRELAQQI 60
ALVL PTRELAQQ+
Sbjct: 79 ALVLTPTRELAQQV 92
>UNIPROTKB|F1LX16 [details] [associations]
symbol:F1LX16 "Uncharacterized protein" species:10116
"Rattus norvegicus" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 Pfam:PF00270 Pfam:PF00271 Pfam:PF08152
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00949361
Ensembl:ENSRNOT00000004240 Uniprot:F1LX16
Length = 659
Score = 132 (51.5 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 28/73 (38%), Positives = 47/73 (64%)
Query: 108 KVIVFVETKKKVEDITR--ALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDV 165
+ I+F ETKK +++++ ++++ S +HGD Q+ R+ L FR +LVAT+V
Sbjct: 320 RTIIFCETKKDAQELSQNTCIKQDAQS---LHGDIPQKQREITLKGFRNDNFGVLVATNV 376
Query: 166 AARGLDVEDVNTV 178
AARGLD+ +V+ V
Sbjct: 377 AARGLDIPEVDLV 389
Score = 106 (42.4 bits), Expect = 6.1e-13, Sum P(2) = 6.1e-13
Identities = 22/46 (47%), Positives = 27/46 (58%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGTPKGPQ 85
K+G P LVLAPTRELA Q+ + + L C +GGTP G Q
Sbjct: 136 KRGRAPQVLVLAPTRELANQVSKDFSDITKKLSVACFYGGTPYGGQ 181
>UNIPROTKB|A4QVP2 [details] [associations]
symbol:TIF1 "ATP-dependent RNA helicase eIF4A"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:CM001231 GO:GO:0043581 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K03257 OrthoDB:EOG4PG98F
RefSeq:XP_003711015.1 ProteinModelPortal:A4QVP2 SMR:A4QVP2
EnsemblFungi:MGG_04400T0 GeneID:2677872 KEGG:mgr:MGG_04400
Uniprot:A4QVP2
Length = 396
Score = 148 (57.2 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F T++KV+ +T L + +HGD Q RD ++ +FR G + +L+ATD+ A
Sbjct: 264 QAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMDQAQRDLIMKEFRSGSSRVLIATDLLA 323
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 324 RGIDVQQVSLV 334
Score = 78 (32.5 bits), Expect = 6.6e-13, Sum P(2) = 6.6e-13
Identities = 21/37 (56%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
AL+LAPTRELAQQIQ V +F + + CI GGT
Sbjct: 94 ALILAPTRELAQQIQKVVVAIGDFMNIECHACI-GGT 129
>ZFIN|ZDB-GENE-040426-915 [details] [associations]
symbol:eif4a3 "eukaryotic translation initiation
factor 4A, isoform 3" species:7955 "Danio rerio" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006417 "regulation of
translation" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-040426-915
GO:GO:0005524 GO:GO:0005737 GO:GO:0006417 GO:GO:0000184
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:BC045939 IPI:IPI00481285 RefSeq:NP_957372.1
UniGene:Dr.78203 ProteinModelPortal:Q7ZVA6 SMR:Q7ZVA6 STRING:Q7ZVA6
PRIDE:Q7ZVA6 GeneID:394053 KEGG:dre:394053 InParanoid:Q7ZVA6
NextBio:20815014 ArrayExpress:Q7ZVA6 Uniprot:Q7ZVA6
Length = 406
Score = 153 (58.9 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ +T +R + +HGD Q++R+ ++ +FR G + +L++TDV A
Sbjct: 274 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 333
Query: 168 RGLDVEDVNTV 178
RGLDV V+ +
Sbjct: 334 RGLDVSQVSLI 344
Score = 71 (30.1 bits), Expect = 6.8e-13, Sum P(2) = 6.8e-13
Identities = 20/40 (50%), Positives = 25/40 (62%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGTPKG 83
AL+LAPTRELA QIQ V ++ + + CI GGT G
Sbjct: 104 ALILAPTRELAGQIQKVLLALGDYMNVQCHACI-GGTNVG 142
>FB|FBgn0001942 [details] [associations]
symbol:eIF-4a "Eukaryotic initiation factor 4a" species:7227
"Drosophila melanogaster" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0006413 "translational initiation"
evidence=ISS;NAS] [GO:0016281 "eukaryotic translation initiation
factor 4F complex" evidence=ISS] [GO:0003743 "translation
initiation factor activity" evidence=ISS;NAS] [GO:0005829 "cytosol"
evidence=ISS;NAS] [GO:0017116 "single-stranded DNA-dependent
ATP-dependent DNA helicase activity" evidence=NAS] [GO:0006268 "DNA
unwinding involved in replication" evidence=NAS] [GO:0000339 "RNA
cap binding" evidence=NAS] [GO:0003729 "mRNA binding" evidence=NAS]
[GO:0007446 "imaginal disc growth" evidence=TAS] [GO:0002168
"instar larval development" evidence=TAS] [GO:0009950
"dorsal/ventral axis specification" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000381 "regulation of alternative mRNA
splicing, via spliceosome" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC] [GO:0000022 "mitotic spindle elongation" evidence=IMP]
[GO:0007052 "mitotic spindle organization" evidence=IMP]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0007067 "mitosis" evidence=IMP] [GO:0006974 "response to DNA
damage stimulus" evidence=IMP] [GO:0048132 "female germ-line stem
cell division" evidence=IGI;IMP] [GO:0030718 "germ-line stem cell
maintenance" evidence=IMP] [GO:0048477 "oogenesis" evidence=IGI]
[GO:0072686 "mitotic spindle" evidence=IDA] [GO:0051297 "centrosome
organization" evidence=IMP] [GO:0005813 "centrosome" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005813 GO:GO:0005875 GO:GO:0007067 EMBL:AE014134
GO:GO:0051297 GO:GO:0016281 GO:GO:0006974 GO:GO:0003743
GO:GO:0030718 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0000022 GO:GO:0072686 GO:GO:0048132 GO:GO:0002168
GO:GO:0008026 GO:GO:0000381 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0007446
GeneTree:ENSGT00530000062880 KO:K03257 OMA:TENDARQ EMBL:X69045
EMBL:AF145621 EMBL:AY069283 EMBL:AY121623 PIR:S30278
RefSeq:NP_001245907.1 RefSeq:NP_476595.1 RefSeq:NP_723137.1
RefSeq:NP_723138.1 RefSeq:NP_723139.1 UniGene:Dm.7226
ProteinModelPortal:Q02748 SMR:Q02748 DIP:DIP-18113N IntAct:Q02748
MINT:MINT-892982 STRING:Q02748 PaxDb:Q02748 PRIDE:Q02748
EnsemblMetazoa:FBtr0079175 EnsemblMetazoa:FBtr0079176
EnsemblMetazoa:FBtr0079177 EnsemblMetazoa:FBtr0079178
EnsemblMetazoa:FBtr0307068 EnsemblMetazoa:FBtr0331201 GeneID:33835
KEGG:dme:Dmel_CG9075 CTD:33835 FlyBase:FBgn0001942
InParanoid:Q02748 OrthoDB:EOG4B8GVF PhylomeDB:Q02748 ChiTaRS:eIF-4a
GenomeRNAi:33835 NextBio:785508 Bgee:Q02748 GermOnline:CG9075
Uniprot:Q02748
Length = 403
Score = 150 (57.9 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 24/69 (34%), Positives = 45/69 (65%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
++F T++KV+ +T+ + + +HGD Q+DR+ ++ FR G + +L+ TD+ ARG
Sbjct: 273 VIFCNTRRKVDQLTQEMSIHNFTVSAMHGDMEQRDREVIMKQFRSGSSRVLITTDLLARG 332
Query: 170 LDVEDVNTV 178
+DV+ V+ V
Sbjct: 333 IDVQQVSLV 341
Score = 75 (31.5 bits), Expect = 7.2e-13, Sum P(2) = 7.2e-13
Identities = 20/37 (54%), Positives = 23/37 (62%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGT 80
AL+LAPTRELA QIQ V E+ + CI GGT
Sbjct: 101 ALILAPTRELATQIQRVVMALGEYMKVHSHACI-GGT 136
>TIGR_CMR|SO_3783 [details] [associations]
symbol:SO_3783 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014299
GenomeReviews:AE014299_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q58083 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_719320.1 ProteinModelPortal:Q8EAV8 GeneID:1171430
KEGG:son:SO_3783 PATRIC:23527244 ProtClustDB:CLSK2393932
Uniprot:Q8EAV8
Length = 535
Score = 144 (55.7 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+V+VF TK + ++L + SA IHG+K+Q R L DF+ G+ +LVATD+AA
Sbjct: 245 QVLVFSRTKHGANRLAKSLIQAEISAAAIHGNKSQGARTKALADFKSGEVRVLVATDIAA 304
Query: 168 RGLDVEDVNTV 178
RGLD++ + V
Sbjct: 305 RGLDIDQLPQV 315
Score = 87 (35.7 bits), Expect = 7.8e-13, Sum P(2) = 7.8e-13
Identities = 23/63 (36%), Positives = 31/63 (49%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSS--ALRNICIFGGTPK 82
+ LP ++ K G ALVL PTRELA Q+ + + LR+ +FGG P
Sbjct: 55 FTLPLLELLAKGHKAKSGQTR-ALVLTPTRELAAQVGESVETYGKYLPLRSAVVFGGVPI 113
Query: 83 GPQ 85
PQ
Sbjct: 114 NPQ 116
>ASPGD|ASPL0000037981 [details] [associations]
symbol:AN2932 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005829 "cytosol"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 EMBL:AACD01000051 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 KO:K03257 OMA:TENDARQ RefSeq:XP_660536.1
PRIDE:Q5B948 GeneID:2874390 KEGG:ani:AN2932.2 OrthoDB:EOG4PG98F
Uniprot:Q5B948
Length = 398
Score = 148 (57.2 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F T++KV+ +T L + +HGD Q RD ++ +FR G + +L+ATD+ A
Sbjct: 266 QAVIFCNTRRKVDWLTDKLTARDFTVSAMHGDMEQAQRDVIMKEFRSGSSRVLIATDLLA 325
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 326 RGIDVQQVSLV 336
Score = 76 (31.8 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 20/37 (54%), Positives = 25/37 (67%)
Query: 47 ALVLAPTRELAQQIQTVA---KEFSSALRNICIFGGT 80
AL++APTRELAQQIQ V +F + + CI GGT
Sbjct: 96 ALIVAPTRELAQQIQKVVIAIGDFMNIQCHACI-GGT 131
>UNIPROTKB|Q65N62 [details] [associations]
symbol:cshA "DEAD-box ATP-dependent RNA helicase CshA"
species:279010 "Bacillus licheniformis DSM 13 = ATCC 14580"
[GO:0003723 "RNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=ISS] [GO:0043590 "bacterial nucleoid" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043590
HOGENOM:HOG000268810 OMA:IIDHINR HSSP:Q58083 EMBL:AE017333
EMBL:CP000002 RefSeq:YP_006711973.1 RefSeq:YP_077785.1
ProteinModelPortal:Q65N62 STRING:Q65N62 DNASU:3098967
EnsemblBacteria:EBBACT00000055567 EnsemblBacteria:EBBACT00000059427
GeneID:3030407 GeneID:3098967 GenomeReviews:AE017333_GR
GenomeReviews:CP000002_GR KEGG:bld:BLi00546 KEGG:bli:BL02197
PATRIC:18946609 ProtClustDB:CLSK886742
BioCyc:BLIC279010:GJ2P-538-MONOMER Uniprot:Q65N62
Length = 487
Score = 162 (62.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 35/69 (50%), Positives = 45/69 (65%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
IVF TK++V+++T AL ++A IHGD TQ R L F+QG +LVATDVAARG
Sbjct: 245 IVFGRTKRRVDELTEALNLRGYTAEGIHGDLTQAKRMVALRKFKQGAIEVLVATDVAARG 304
Query: 170 LDVEDVNTV 178
LD+ V V
Sbjct: 305 LDISGVTHV 313
Score = 57 (25.1 bits), Expect = 1.1e-12, Sum P(2) = 1.1e-12
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSS--ALRNICIFGGTPKGPQ 85
A+V+APTRELA Q+ + R + I+GG G Q
Sbjct: 74 AIVIAPTRELAIQVSEELYKIGQDKRARVLPIYGGQDIGRQ 114
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 134 (52.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGT 80
Y+ P H+ HQEP++ DGPI+++L PTREL+ Q++ AK + A + + ++GG+
Sbjct: 777 YLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGS 834
Score = 109 (43.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 19/67 (28%), Positives = 42/67 (62%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV + + + + L + ++ + +HG + Q DR + L F++ + +L+AT V AR
Sbjct: 973 VLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMAR 1032
Query: 169 GLDVEDV 175
G+D++++
Sbjct: 1033 GIDIKNI 1039
Score = 65 (27.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 188 NHNISQVIEVVQDYEKEKRLFSLIRELGKYTLI 220
N+NI Q +E++++ +K RL L+ E KY L+
Sbjct: 941 NNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLV 973
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 134 (52.2 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 23/58 (39%), Positives = 39/58 (67%)
Query: 25 YMLPAAVHISHQEPVKQGDGPIALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGT 80
Y+ P H+ HQEP++ DGPI+++L PTREL+ Q++ AK + A + + ++GG+
Sbjct: 777 YLFPVIRHVLHQEPLRNNDGPISIILTPTRELSIQVKNEAKIYCKAVNIEILAVYGGS 834
Score = 109 (43.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 19/67 (28%), Positives = 42/67 (62%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
V++FV + + + + L + ++ + +HG + Q DR + L F++ + +L+AT V AR
Sbjct: 973 VLIFVNKQIEADLLYLELYKYDYNLLVLHGGQDQTDRQFTLEKFKKEENKVLIATSVMAR 1032
Query: 169 GLDVEDV 175
G+D++++
Sbjct: 1033 GIDIKNI 1039
Score = 65 (27.9 bits), Expect = 4.1e-08, Sum P(2) = 4.1e-08
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 188 NHNISQVIEVVQDYEKEKRLFSLIRELGKYTLI 220
N+NI Q +E++++ +K RL L+ E KY L+
Sbjct: 941 NNNIYQFVEIIEESKKVFRLLKLLGEWIKYGLV 973
>UNIPROTKB|E1BW15 [details] [associations]
symbol:DDX50 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003725
"double-stranded RNA binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0009615 "response to virus" evidence=IEA]
[GO:0043330 "response to exogenous dsRNA" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012562
Pfam:PF00270 Pfam:PF00271 Pfam:PF08152 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003725
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0043330 GeneTree:ENSGT00680000100003 OMA:EILCVAY
EMBL:AADN02028009 IPI:IPI00582179 Ensembl:ENSGALT00000006591
Uniprot:E1BW15
Length = 693
Score = 135 (52.6 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 31/72 (43%), Positives = 43/72 (59%)
Query: 108 KVIVFVETKKKVEDITRALRRE-RHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVA 166
+ IVF ETKK ++ AL + +HGD Q+ R+ L FR G +LVAT+VA
Sbjct: 367 RTIVFCETKKDANEL--ALNASIKQDCQSLHGDIPQKQREITLKGFRNGAFKVLVATNVA 424
Query: 167 ARGLDVEDVNTV 178
ARGLD+ +V+ V
Sbjct: 425 ARGLDIPEVDLV 436
Score = 100 (40.3 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGTPKGPQ 85
++G P LVLAPTRELA Q+ K+ + L C +GGTP Q
Sbjct: 183 RRGRSPKVLVLAPTRELANQVAKDFKDITRKLTVACFYGGTPYNGQ 228
>ZFIN|ZDB-GENE-031113-10 [details] [associations]
symbol:ddx21 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
21" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012562 InterPro:IPR017956 Pfam:PF00270 Pfam:PF00271
Pfam:PF08152 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
ZFIN:ZDB-GENE-031113-10 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 CTD:9188 HOVERGEN:HBG051331
OrthoDB:EOG46143T EMBL:BC160629 IPI:IPI00611974
RefSeq:NP_001120807.1 UniGene:Dr.104447 ProteinModelPortal:B1H1J4
STRING:B1H1J4 GeneID:799650 KEGG:dre:799650 NextBio:20933916
Uniprot:B1H1J4
Length = 759
Score = 142 (55.0 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 32/72 (44%), Positives = 46/72 (63%)
Query: 108 KVIVFVETKKKVEDITRALRRE-RHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVA 166
+ IVF ETKK+ +++ L + SA +HGD Q+ R+ L FR G +LVAT+VA
Sbjct: 420 RTIVFCETKKEATELS--LNTSIKQSAQSLHGDIPQKQREVTLKGFRNGSFEVLVATNVA 477
Query: 167 ARGLDVEDVNTV 178
ARGLD+ +V+ V
Sbjct: 478 ARGLDIPEVDLV 489
Score = 92 (37.4 bits), Expect = 1.2e-12, Sum P(2) = 1.2e-12
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 40 KQGDGPIALVLAPTRELAQQIQTVAKEFSSALRNICIFGGTPKGPQ 85
++G P LVLAPTRELA Q+ K+ + L C +GG+ PQ
Sbjct: 236 RRGRPPKVLVLAPTRELAIQVTKDFKDITRKLSVTCFYGGSSYNPQ 281
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 156 (60.0 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 32/74 (43%), Positives = 46/74 (62%)
Query: 105 PAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATD 164
P ++FVETK+ + +T L A IHGD+TQ++R+ L FR G+ I+VAT
Sbjct: 429 PEGLTLIFVETKRMADTLTDYLLNSNFPATSIHGDRTQRERERALELFRSGRTSIMVATA 488
Query: 165 VAARGLDVEDVNTV 178
VA+RGLD+ +V V
Sbjct: 489 VASRGLDIPNVTHV 502
Score = 70 (29.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 16/37 (43%), Positives = 23/37 (62%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFS--SALRNICIFGG 79
P L+LAPTREL QI +++F S +R ++GG
Sbjct: 256 PTTLILAPTRELVCQIHEESRKFCYRSWVRPCAVYGG 292
>CGD|CAL0005460 [details] [associations]
symbol:DBP3 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000464 "endonucleolytic cleavage in
ITS1 upstream of 5.8S rRNA from tricistronic rRNA transcript
(SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA] [GO:0008186
"RNA-dependent ATPase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0005460
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 EMBL:AACQ01000001
EMBL:AACQ01000002 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_723365.1 RefSeq:XP_723554.1
ProteinModelPortal:Q5APT8 STRING:Q5APT8 GeneID:3634868
GeneID:3635070 KEGG:cal:CaO19.12334 KEGG:cal:CaO19.4870 KO:K14811
Uniprot:Q5APT8
Length = 564
Score = 161 (61.7 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 33/81 (40%), Positives = 50/81 (61%)
Query: 98 QYEMAKNPAFKVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKA 157
+Y ++ K+++F KK+ I L+R R S IHGD +QQ R L+ F+ G++
Sbjct: 392 KYNANESSDNKILIFALYKKEASRIENFLKRNRFSVAAIHGDLSQQQRTAALSAFKSGQS 451
Query: 158 PILVATDVAARGLDVEDVNTV 178
+L+ATDVAARGLD+ +V V
Sbjct: 452 NLLLATDVAARGLDIPNVKVV 472
Score = 59 (25.8 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 48 LVLAPTRELAQQIQTVAKEFS--SALRNICIFGGTPKGPQ 85
L ++PTRELA QI E + S + + ++GG K Q
Sbjct: 227 LCISPTRELALQIYDNLIELTADSGVNCVAVYGGVSKDDQ 266
>UNIPROTKB|Q2NL22 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9913 "Bos taurus" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005737 GO:GO:0000184
GO:GO:0008380 GO:GO:0017148 GO:GO:0016607 GO:GO:0006397
GO:GO:0045727 GO:GO:0051028 GO:GO:0071013 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004
GO:GO:0035145 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989
GeneTree:ENSGT00530000062880 KO:K13025 EMBL:BC111184
IPI:IPI00708766 RefSeq:NP_001039653.1 UniGene:Bt.3377
ProteinModelPortal:Q2NL22 SMR:Q2NL22 PRIDE:Q2NL22
Ensembl:ENSBTAT00000021327 GeneID:515145 KEGG:bta:515145 CTD:9775
InParanoid:Q2NL22 OMA:LALGDFM OrthoDB:EOG4229JV NextBio:20871682
Uniprot:Q2NL22
Length = 411
Score = 152 (58.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ +T +R + +HGD Q++R+ ++ +FR G + +L++TDV A
Sbjct: 279 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 338
Query: 168 RGLDVEDVNTV 178
RGLDV V+ +
Sbjct: 339 RGLDVPQVSLI 349
Score = 67 (28.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 47 ALVLAPTRELAQQIQT---VAKEFSSALRNICIFGGTPKG 83
AL+LAPTRELA QIQ ++ + + CI GGT G
Sbjct: 109 ALILAPTRELAVQIQKGLLALGDYMNVQCHACI-GGTNVG 147
>UNIPROTKB|E2RDZ4 [details] [associations]
symbol:EIF4A3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0048026 "positive regulation of mRNA splicing,
via spliceosome" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045727 "positive regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0017148
"negative regulation of translation" evidence=IEA] [GO:0008143
"poly(A) RNA binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT CTD:9775
EMBL:AAEX03006203 RefSeq:XP_533130.2 Ensembl:ENSCAFT00000009055
GeneID:475922 KEGG:cfa:475922 NextBio:20851666 Uniprot:E2RDZ4
Length = 411
Score = 152 (58.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ +T +R + +HGD Q++R+ ++ +FR G + +L++TDV A
Sbjct: 279 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 338
Query: 168 RGLDVEDVNTV 178
RGLDV V+ +
Sbjct: 339 RGLDVPQVSLI 349
Score = 67 (28.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 47 ALVLAPTRELAQQIQT---VAKEFSSALRNICIFGGTPKG 83
AL+LAPTRELA QIQ ++ + + CI GGT G
Sbjct: 109 ALILAPTRELAVQIQKGLLALGDYMNVQCHACI-GGTNVG 147
>UNIPROTKB|P38919 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9606 "Homo sapiens" [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048026 "positive
regulation of mRNA splicing, via spliceosome" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0045727 "positive regulation
of translation" evidence=IMP] [GO:0000398 "mRNA splicing, via
spliceosome" evidence=IC] [GO:0035145 "exon-exon junction complex"
evidence=IDA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IMP;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IDA] [GO:0000288
"nuclear-transcribed mRNA catabolic process,
deadenylation-dependent decay" evidence=TAS] [GO:0000289
"nuclear-transcribed mRNA poly(A) tail shortening" evidence=TAS]
[GO:0005829 "cytosol" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0019221
"cytokine-mediated signaling pathway" evidence=TAS]
Reactome:REACT_71 Reactome:REACT_21257 InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_6900 GO:GO:0000184 GO:GO:0017148
GO:GO:0016607 GO:GO:0019221 TCDB:3.A.18.1.1 EMBL:CH471099
GO:GO:0045727 GO:GO:0051028 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 GO:GO:0000289 EMBL:AC087741 GO:GO:0035145 PDB:2HYI
PDB:2J0Q PDB:2J0S PDB:2J0U PDB:2XB2 PDB:3EX7 PDBsum:2HYI
PDBsum:2J0Q PDBsum:2J0S PDBsum:2J0U PDBsum:2XB2 PDBsum:3EX7
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0008143 HOVERGEN:HBG107989 KO:K13025
OMA:EDWKFDT CTD:9775 OrthoDB:EOG4229JV EMBL:X79538 EMBL:D21853
EMBL:AK290608 EMBL:CR456750 EMBL:BC003662 EMBL:BC004386
EMBL:BC011151 IPI:IPI00009328 PIR:S45142 RefSeq:NP_055555.1
UniGene:Hs.389649 PDB:2HXY PDBsum:2HXY ProteinModelPortal:P38919
SMR:P38919 DIP:DIP-33218N IntAct:P38919 MINT:MINT-1460615
STRING:P38919 PhosphoSite:P38919 DMDM:20532400
REPRODUCTION-2DPAGE:IPI00009328 PaxDb:P38919 PeptideAtlas:P38919
PRIDE:P38919 DNASU:9775 Ensembl:ENST00000269349 GeneID:9775
KEGG:hsa:9775 UCSC:uc002jxs.3 GeneCards:GC17M078109 HGNC:HGNC:18683
HPA:HPA021878 MIM:608546 neXtProt:NX_P38919 PharmGKB:PA162384945
InParanoid:P38919 PhylomeDB:P38919 ChiTaRS:EIF4A3
EvolutionaryTrace:P38919 GenomeRNAi:9775 NextBio:36802 Bgee:P38919
CleanEx:HS_EIF4A3 Genevestigator:P38919 GermOnline:ENSG00000141543
Uniprot:P38919
Length = 411
Score = 152 (58.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ +T +R + +HGD Q++R+ ++ +FR G + +L++TDV A
Sbjct: 279 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 338
Query: 168 RGLDVEDVNTV 178
RGLDV V+ +
Sbjct: 339 RGLDVPQVSLI 349
Score = 67 (28.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 47 ALVLAPTRELAQQIQT---VAKEFSSALRNICIFGGTPKG 83
AL+LAPTRELA QIQ ++ + + CI GGT G
Sbjct: 109 ALILAPTRELAVQIQKGLLALGDYMNVQCHACI-GGTNVG 147
>UNIPROTKB|A6M931 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0006417
"regulation of translation" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
GO:GO:0051028 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:DQ351286 RefSeq:NP_001093663.1
UniGene:Ssc.869 ProteinModelPortal:A6M931 SMR:A6M931 PRIDE:A6M931
GeneID:100101926 KEGG:ssc:100101926 Uniprot:A6M931
Length = 411
Score = 152 (58.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ +T +R + +HGD Q++R+ ++ +FR G + +L++TDV A
Sbjct: 279 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 338
Query: 168 RGLDVEDVNTV 178
RGLDV V+ +
Sbjct: 339 RGLDVPQVSLI 349
Score = 67 (28.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 47 ALVLAPTRELAQQIQT---VAKEFSSALRNICIFGGTPKG 83
AL+LAPTRELA QIQ ++ + + CI GGT G
Sbjct: 109 ALILAPTRELAVQIQKGLLALGDYMNVQCHACI-GGTNVG 147
>UNIPROTKB|F1RZ83 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9823 "Sus scrofa" [GO:0071013 "catalytic step 2
spliceosome" evidence=IEA] [GO:0045727 "positive regulation of
translation" evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0008143 "poly(A) RNA binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00530000062880 OMA:EDWKFDT
EMBL:CU655945 Ensembl:ENSSSCT00000018679 ArrayExpress:F1RZ83
Uniprot:F1RZ83
Length = 411
Score = 152 (58.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ +T +R + +HGD Q++R+ ++ +FR G + +L++TDV A
Sbjct: 279 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 338
Query: 168 RGLDVEDVNTV 178
RGLDV V+ +
Sbjct: 339 RGLDVPQVSLI 349
Score = 67 (28.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 47 ALVLAPTRELAQQIQT---VAKEFSSALRNICIFGGTPKG 83
AL+LAPTRELA QIQ ++ + + CI GGT G
Sbjct: 109 ALILAPTRELAVQIQKGLLALGDYMNVQCHACI-GGTNVG 147
>RGD|1591139 [details] [associations]
symbol:Eif4a3 "eukaryotic translation initiation factor 4A,
isoform 3" species:10116 "Rattus norvegicus" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0035145 "exon-exon junction complex" evidence=IEA] [GO:0045727
"positive regulation of translation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048026 "positive regulation of mRNA
splicing, via spliceosome" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1591139 GO:GO:0005524
GO:GO:0005737 GO:GO:0006417 GO:GO:0000184 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0005681 GO:GO:0003723
EMBL:CH473948 GO:GO:0051028 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P60842 KO:K13025 CTD:9775 EMBL:BC105875
IPI:IPI00656385 RefSeq:NP_001093628.1 UniGene:Rn.202617
ProteinModelPortal:Q3B8Q2 SMR:Q3B8Q2 PRIDE:Q3B8Q2 GeneID:688288
KEGG:rno:688288 NextBio:736113 Genevestigator:Q3B8Q2 Uniprot:Q3B8Q2
Length = 411
Score = 152 (58.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ +T +R + +HGD Q++R+ ++ +FR G + +L++TDV A
Sbjct: 279 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 338
Query: 168 RGLDVEDVNTV 178
RGLDV V+ +
Sbjct: 339 RGLDVPQVSLI 349
Score = 67 (28.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 47 ALVLAPTRELAQQIQT---VAKEFSSALRNICIFGGTPKG 83
AL+LAPTRELA QIQ ++ + + CI GGT G
Sbjct: 109 ALILAPTRELAVQIQKGLLALGDYMNVQCHACI-GGTNVG 147
>UNIPROTKB|Q5ZM36 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA
catabolic process, nonsense-mediated decay" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0006417 "regulation of translation" evidence=IEA] [GO:0008380
"RNA splicing" evidence=IEA] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0006417 GO:GO:0000184 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0051028 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K13025 CTD:9775
OrthoDB:EOG4229JV EMBL:AJ719548 IPI:IPI00588271
RefSeq:NP_001025820.1 UniGene:Gga.7844 ProteinModelPortal:Q5ZM36
SMR:Q5ZM36 PRIDE:Q5ZM36 GeneID:416704 KEGG:gga:416704
InParanoid:Q5ZM36 NextBio:20820126 Uniprot:Q5ZM36
Length = 412
Score = 152 (58.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ +T +R + +HGD Q++R+ ++ +FR G + +L++TDV A
Sbjct: 280 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 339
Query: 168 RGLDVEDVNTV 178
RGLDV V+ +
Sbjct: 340 RGLDVPQVSLI 350
Score = 67 (28.6 bits), Expect = 2.6e-12, Sum P(2) = 2.6e-12
Identities = 19/40 (47%), Positives = 24/40 (60%)
Query: 47 ALVLAPTRELAQQIQT---VAKEFSSALRNICIFGGTPKG 83
AL+LAPTRELA QIQ ++ + + CI GGT G
Sbjct: 110 ALILAPTRELAVQIQKGLLALGDYMNVQCHACI-GGTNVG 148
>WB|WBGene00018007 [details] [associations]
symbol:F33D11.10 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0009790 "embryo development"
evidence=IMP] [GO:0001703 "gastrulation with mouth forming first"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0051301
"cell division" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0018996 "molting
cycle, collagen and cuticulin-based cuticle" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0018996 GO:GO:0003676
GO:GO:0000910 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 HOGENOM:HOG000268797
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 GO:GO:0001703 KO:K13025 OMA:IFGKQPF
EMBL:FO080753 PIR:T32773 RefSeq:NP_491703.1
ProteinModelPortal:O44781 SMR:O44781 DIP:DIP-27243N IntAct:O44781
MINT:MINT-1047941 STRING:O44781 PaxDb:O44781
EnsemblMetazoa:F33D11.10.1 EnsemblMetazoa:F33D11.10.2 GeneID:172258
KEGG:cel:CELE_F33D11.10 UCSC:F33D11.10.1 CTD:172258
WormBase:F33D11.10 InParanoid:O44781 NextBio:874709 Uniprot:O44781
Length = 399
Score = 150 (57.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F T++KV+ +T ++ + +HGD Q+DRD V+ +FR G +L++TDV A
Sbjct: 267 QAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWA 326
Query: 168 RGLDVEDVNTV 178
RGLDV V+ V
Sbjct: 327 RGLDVPQVSLV 337
Score = 69 (29.3 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGTPKG 83
AL+L+PTRELA QIQ V ++ + + CI GGT G
Sbjct: 97 ALILSPTRELAVQIQKVVLALGDYMNVQCHACI-GGTNLG 135
>WB|WBGene00022029 [details] [associations]
symbol:Y65B4A.6 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0018991 "oviposition" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0040020 "regulation of meiosis" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0018991 GO:GO:0002119
GO:GO:0018996 GO:GO:0040011 GO:GO:0003676 GO:GO:0042127
GO:GO:0040035 GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00530000062880 KO:K13025 OMA:EDWKFDT EMBL:FO081482
RefSeq:NP_490761.2 ProteinModelPortal:Q9BL61 SMR:Q9BL61
STRING:Q9BL61 PaxDb:Q9BL61 EnsemblMetazoa:Y65B4A.6 GeneID:190485
KEGG:cel:CELE_Y65B4A.6 UCSC:Y65B4A.6 CTD:190485 WormBase:Y65B4A.6
InParanoid:Q9BL61 NextBio:945920 Uniprot:Q9BL61
Length = 399
Score = 150 (57.9 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 28/71 (39%), Positives = 46/71 (64%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F T++KV+ +T ++ + +HGD Q+DRD V+ +FR G +L++TDV A
Sbjct: 267 QAVLFCNTRRKVDWLTDKMKEANFTVSSMHGDMEQKDRDEVMKEFRAGTTRVLISTDVWA 326
Query: 168 RGLDVEDVNTV 178
RGLDV V+ V
Sbjct: 327 RGLDVPQVSLV 337
Score = 69 (29.3 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 19/40 (47%), Positives = 25/40 (62%)
Query: 47 ALVLAPTRELAQQIQTVAK---EFSSALRNICIFGGTPKG 83
AL+L+PTRELA QIQ V ++ + + CI GGT G
Sbjct: 97 ALILSPTRELAVQIQKVVLALGDYMNVQCHACI-GGTNLG 135
>POMBASE|SPAC1006.07 [details] [associations]
symbol:SPAC1006.07 "translation initiation factor eIF4A
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0002183
"cytoplasmic translational initiation" evidence=NAS] [GO:0003743
"translation initiation factor activity" evidence=ISO] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISO] [GO:0005524
"ATP binding" evidence=IC] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006413 "translational initiation" evidence=ISO] [GO:0016281
"eukaryotic translation initiation factor 4F complex" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC1006.07 GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016281 GO:GO:0003743
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 HOGENOM:HOG000268797 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0002183 KO:K03257 OrthoDB:EOG4PG98F
EMBL:X80796 EMBL:L40627 PIR:S71745 RefSeq:NP_594854.1
ProteinModelPortal:P47943 SMR:P47943 STRING:P47943 PRIDE:P47943
EnsemblFungi:SPAC1006.07.1 GeneID:2542948 KEGG:spo:SPAC1006.07
OMA:PILEMED NextBio:20803983 Uniprot:P47943
Length = 392
Score = 144 (55.7 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 26/71 (36%), Positives = 45/71 (63%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F T++KV+ +T L + +HGD Q RD ++++FR G + IL+ TD+ A
Sbjct: 260 QAVIFCNTRRKVDWLTEQLTERDFTVSSMHGDMDQAQRDTLMHEFRTGSSRILITTDLLA 319
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 320 RGIDVQQVSLV 330
Score = 77 (32.2 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 19/36 (52%), Positives = 21/36 (58%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSALRNIC--IFGGT 80
AL+LAPTRELAQQIQ V + C GGT
Sbjct: 90 ALILAPTRELAQQIQKVVVALGDLMNVECHACIGGT 125
>UNIPROTKB|Q48PB7 [details] [associations]
symbol:PSPPH_0449 "ATP-dependent RNA helicase RhlE,
putative" species:264730 "Pseudomonas syringae pv. phaseolicola
1448A" [GO:0006139 "nucleobase-containing compound metabolic
process" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:CP000058 GenomeReviews:CP000058_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_272752.1 ProteinModelPortal:Q48PB7 GeneID:3558820
KEGG:psp:PSPPH_0449 PATRIC:19969930 OMA:DGDLMGF
ProtClustDB:CLSK865855 Uniprot:Q48PB7
Length = 625
Score = 142 (55.0 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 30/73 (41%), Positives = 45/73 (61%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+V+VF TK + L + +A+ IHG+K+Q R L DF+ G I+VATD+AA
Sbjct: 251 QVLVFTRTKHGANRLAEYLDKHGLAAVAIHGNKSQNARTKALADFKAGDVRIMVATDIAA 310
Query: 168 RGLDVEDV-NTVN 179
RGLD++ + + VN
Sbjct: 311 RGLDIDQLPHVVN 323
Score = 86 (35.3 bits), Expect = 3.0e-12, Sum P(2) = 3.0e-12
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFSSALRNI--CIFGGTPKGPQ 85
P LVL PTRELA Q+ K ++ L+ + CIFGG PQ
Sbjct: 80 PRVLVLTPTRELAAQVHESFKLYARDLKFVSACIFGGVGMNPQ 122
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 150 (57.9 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 30/80 (37%), Positives = 48/80 (60%)
Query: 100 EMAKNPAFK-VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAP 158
E ++P + IVF TK + + + L + ++ IHG+K+Q R+ L F+ G+ P
Sbjct: 243 EKIRDPELRSAIVFTRTKHGADGVVKRLAKADIDSVAIHGNKSQSQREKALEAFKAGRVP 302
Query: 159 ILVATDVAARGLDVEDVNTV 178
ILVATD+AARG+ V+ + V
Sbjct: 303 ILVATDIAARGIHVDALTHV 322
Score = 71 (30.1 bits), Expect = 3.1e-12, Sum P(2) = 3.1e-12
Identities = 20/44 (45%), Positives = 24/44 (54%)
Query: 44 GPIALVLAPTRELAQQIQTVAKEFSSAL--RNICIFGGTPKGPQ 85
G LVLAPTRELA QI T + + L R + + GG G Q
Sbjct: 80 GTRVLVLAPTRELAGQIATSFGTYGAGLNLRVVMVCGGAKIGGQ 123
>UNIPROTKB|F1NTS2 [details] [associations]
symbol:EIF4A3 "Eukaryotic initiation factor 4A-III"
species:9031 "Gallus gallus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000184 "nuclear-transcribed mRNA catabolic
process, nonsense-mediated decay" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008143 "poly(A) RNA binding"
evidence=IEA] [GO:0017148 "negative regulation of translation"
evidence=IEA] [GO:0035145 "exon-exon junction complex"
evidence=IEA] [GO:0045727 "positive regulation of translation"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0000184 GO:GO:0017148 GO:GO:0045727 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0035145 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0008143
GeneTree:ENSGT00530000062880 IPI:IPI00588271 EMBL:AADN02041229
EMBL:AADN02041230 ProteinModelPortal:F1NTS2
Ensembl:ENSGALT00000038969 OMA:KTRNGVD ArrayExpress:F1NTS2
Uniprot:F1NTS2
Length = 414
Score = 152 (58.6 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 26/71 (36%), Positives = 47/71 (66%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ +T +R + +HGD Q++R+ ++ +FR G + +L++TDV A
Sbjct: 282 QAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWA 341
Query: 168 RGLDVEDVNTV 178
RGLDV V+ +
Sbjct: 342 RGLDVPQVSLI 352
Score = 66 (28.3 bits), Expect = 3.3e-12, Sum P(2) = 3.3e-12
Identities = 22/53 (41%), Positives = 28/53 (52%)
Query: 47 ALVLAPTRELAQQIQTV--AKEFSSALRNICIFGGTPKGPQDCLPLHRFVFNC 97
AL+LAPTRELA QIQ V +K ++ + G+ K D LP V C
Sbjct: 111 ALILAPTRELAVQIQKVGTSKSLPVKMKELHKAMGSFKQEVD-LPAGHEVARC 162
>TAIR|locus:2091191 [details] [associations]
symbol:EIF4A-III "eukaryotic initiation factor 4A-III"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0016020 "membrane" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0006397 "mRNA
processing" evidence=IPI] [GO:0016607 "nuclear speck" evidence=IDA]
[GO:0035145 "exon-exon junction complex" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730 GO:GO:0016020
GO:GO:0016607 GO:GO:0001666 GO:GO:0006397 GO:GO:0003723
EMBL:AP000417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 GO:GO:0035145 eggNOG:COG0513
HOGENOM:HOG000268797 InterPro:IPR014014 PROSITE:PS51195 KO:K13025
OMA:EDWKFDT EMBL:AJ010456 EMBL:AY050367 EMBL:BT002207
IPI:IPI00522986 PIR:T51737 RefSeq:NP_188610.1 UniGene:At.22577
ProteinModelPortal:Q94A52 SMR:Q94A52 STRING:Q94A52 PaxDb:Q94A52
PRIDE:Q94A52 EnsemblPlants:AT3G19760.1 GeneID:821513
KEGG:ath:AT3G19760 GeneFarm:908 TAIR:At3g19760 InParanoid:Q94A52
PhylomeDB:Q94A52 ProtClustDB:CLSN2915442 Genevestigator:Q94A52
GermOnline:AT3G19760 Uniprot:Q94A52
Length = 408
Score = 160 (61.4 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 27/71 (38%), Positives = 48/71 (67%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++F TK+KV+ ++ +R + +HGD Q++RD ++N+FR G + +L+ TDV A
Sbjct: 276 QAVIFCNTKRKVDYLSEKMRSHNFTVSSMHGDMPQKERDAIMNEFRSGDSRVLITTDVWA 335
Query: 168 RGLDVEDVNTV 178
RG+DV+ V+ V
Sbjct: 336 RGIDVQQVSLV 346
Score = 53 (23.7 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 47 ALVLAPTRELAQQIQTVAKEF---SSALRNICIFGGTPKG 83
AL+L+PTRELA Q + + ++ + CI GG G
Sbjct: 106 ALILSPTRELATQTEKTIQAIGLHANIQAHACI-GGNSVG 144
>TIGR_CMR|CPS_1726 [details] [associations]
symbol:CPS_1726 "RNA helicase DeaD" species:167879
"Colwellia psychrerythraea 34H" [GO:0003724 "RNA helicase activity"
evidence=ISS] [GO:0009409 "response to cold" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:CP000083
GenomeReviews:CP000083_GR InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 RefSeq:YP_268464.1 ProteinModelPortal:Q484Q1
STRING:Q484Q1 GeneID:3523325 KEGG:cps:CPS_1726 PATRIC:21466621
OMA:WIVKGVE ProtClustDB:CLSK741103
BioCyc:CPSY167879:GI48-1803-MONOMER Uniprot:Q484Q1
Length = 611
Score = 144 (55.7 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 28/70 (40%), Positives = 43/70 (61%)
Query: 109 VIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAAR 168
+I+FV T+ DI L R + A+ ++GD Q R+ ++ + GK+ ILVATDV AR
Sbjct: 257 MIIFVRTRNDTVDIAEKLERAGYPALALNGDLNQAQRERCIDQMKSGKSSILVATDVVAR 316
Query: 169 GLDVEDVNTV 178
GLD+ ++ V
Sbjct: 317 GLDIPRISLV 326
Score = 81 (33.6 bits), Expect = 4.9e-12, Sum P(2) = 4.9e-12
Identities = 19/44 (43%), Positives = 24/44 (54%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFSS---ALRNICIFGGTPKGPQ 85
P +VLAPTRELA Q+ + F LR ++GG GPQ
Sbjct: 84 PQLMVLAPTRELAMQVAEAIESFGKDMKGLRVATLYGGQSYGPQ 127
Score = 36 (17.7 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 14 KITNYLLSPPQYMLPAAV 31
KI N L P+++ AAV
Sbjct: 205 KIANRFLKDPEHIKVAAV 222
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 144 (55.7 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 28/71 (39%), Positives = 42/71 (59%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+ ++FV K E + L + +A HGDK Q +R VL+ F+ G +L+ATD+AA
Sbjct: 257 QALIFVNAKHHCEHLAEKLAKRGITAAVFHGDKGQSERSRVLDGFKAGDIEVLIATDIAA 316
Query: 168 RGLDVEDVNTV 178
RGLD+E + V
Sbjct: 317 RGLDIEKLPVV 327
Score = 76 (31.8 bits), Expect = 5.3e-12, Sum P(2) = 5.3e-12
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 33 ISHQEPVKQGDGPIALVLAPTRELAQQ----IQTVAKEFSSALRNICIFGG 79
IS +G+ LVL PTRELA+Q I++ A F+ ++ + +FGG
Sbjct: 74 ISSGSKNSKGNFVTGLVLVPTRELAKQVADSIKSYAVHFNGEIKTLAVFGG 124
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 144 (55.7 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+V+VF +T++ + + L+ + A+ I+GDK+Q R L+DF+ GK L+ATDVAA
Sbjct: 253 QVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAA 312
Query: 168 RGLDVEDVNTV 178
RGLD+ + V
Sbjct: 313 RGLDIAQLEQV 323
Score = 75 (31.5 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGT 80
ALVL PTRELAQQ+ + ++ L+ + ++GGT
Sbjct: 84 ALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGT 119
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 144 (55.7 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 29/71 (40%), Positives = 46/71 (64%)
Query: 108 KVIVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAA 167
+V+VF +T++ + + L+ + A+ I+GDK+Q R L+DF+ GK L+ATDVAA
Sbjct: 253 QVLVFTKTRQGSDALAEELKLDGIKAVSINGDKSQGARQKALDDFKAGKVRALIATDVAA 312
Query: 168 RGLDVEDVNTV 178
RGLD+ + V
Sbjct: 313 RGLDIAQLEQV 323
Score = 75 (31.5 bits), Expect = 6.2e-12, Sum P(2) = 6.2e-12
Identities = 16/36 (44%), Positives = 24/36 (66%)
Query: 47 ALVLAPTRELAQQIQTVAKEFSSA--LRNICIFGGT 80
ALVL PTRELAQQ+ + ++ L+ + ++GGT
Sbjct: 84 ALVLVPTRELAQQVLDSLQAYAKGTELKIVAVYGGT 119
>UNIPROTKB|Q8EIE5 [details] [associations]
symbol:dbpA "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 141 (54.7 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VF TK++ + + L S + +HGD Q+DRD L F A +LVATDVAARG
Sbjct: 244 VVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARG 303
Query: 170 LDVEDVNTV 178
LD++ ++ V
Sbjct: 304 LDIDALDAV 312
Score = 80 (33.2 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 48 LVLAPTRELAQQIQTVAKEFSSALRNICIF---GGTPKGPQ 85
LVL PTRELA Q+ + + + N+ + GG P GPQ
Sbjct: 73 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQ 113
>TIGR_CMR|SO_0897 [details] [associations]
symbol:SO_0897 "ATP-dependent RNA helicase DbpA"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268809 KO:K05591
OMA:HIDPARF ProtClustDB:PRK11776 InterPro:IPR005580 Pfam:PF03880
HSSP:P10081 RefSeq:NP_716527.1 ProteinModelPortal:Q8EIE5
GeneID:1168744 KEGG:son:SO_0897 PATRIC:23521451 Uniprot:Q8EIE5
Length = 458
Score = 141 (54.7 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 29/69 (42%), Positives = 42/69 (60%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
+VF TK++ + + L S + +HGD Q+DRD L F A +LVATDVAARG
Sbjct: 244 VVFCNTKRETQKVADELEGLGFSVLALHGDLEQRDRDETLLQFANKSACVLVATDVAARG 303
Query: 170 LDVEDVNTV 178
LD++ ++ V
Sbjct: 304 LDIDALDAV 312
Score = 80 (33.2 bits), Expect = 6.5e-12, Sum P(2) = 6.5e-12
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 48 LVLAPTRELAQQIQTVAKEFSSALRNICIF---GGTPKGPQ 85
LVL PTRELA Q+ + + + N+ + GG P GPQ
Sbjct: 73 LVLCPTRELADQVAQEIRTLARGIHNVKVLTLCGGVPMGPQ 113
>UNIPROTKB|P0A9P6 [details] [associations]
symbol:deaD "DeaD, DEAD-box RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0030684 "preribosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0000027 "ribosomal large
subunit assembly" evidence=IMP] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0006401 "RNA catabolic
process" evidence=IGI] [GO:0003724 "RNA helicase activity"
evidence=IDA] [GO:0070417 "cellular response to cold"
evidence=IEP;IMP] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR021046 Pfam:PF00270 Pfam:PF00271 Pfam:PF12343
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005737 EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR EMBL:U18997 GO:GO:0003723 GO:GO:0006401
GO:GO:0070417 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0000027 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268810 KO:K05592 InterPro:IPR005580
Pfam:PF03880 EMBL:M63288 EMBL:U03750 PIR:F65106 RefSeq:NP_417631.2
RefSeq:YP_491349.1 ProteinModelPortal:P0A9P6 SMR:P0A9P6
DIP:DIP-35752N IntAct:P0A9P6 MINT:MINT-1219396 SWISS-2DPAGE:P0A9P6
PaxDb:P0A9P6 PRIDE:P0A9P6 EnsemblBacteria:EBESCT00000000679
EnsemblBacteria:EBESCT00000014242 GeneID:12933435 GeneID:947674
KEGG:ecj:Y75_p3084 KEGG:eco:b3162 PATRIC:32121742 EchoBASE:EB0211
EcoGene:EG10215 OMA:ILFMTPR ProtClustDB:PRK11634
BioCyc:EcoCyc:EG10215-MONOMER BioCyc:ECOL316407:JW5531-MONOMER
Genevestigator:P0A9P6 GO:GO:0030684 Uniprot:P0A9P6
Length = 629
Score = 145 (56.1 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 29/69 (42%), Positives = 43/69 (62%)
Query: 110 IVFVETKKKVEDITRALRRERHSAICIHGDKTQQDRDYVLNDFRQGKAPILVATDVAARG 169
I+FV TK ++ AL R +++ ++GD Q R+ L + G+ IL+ATDVAARG
Sbjct: 249 IIFVRTKNATLEVAEALERNGYNSAALNGDMNQALREQTLERLKDGRLDILIATDVAARG 308
Query: 170 LDVEDVNTV 178
LDVE ++ V
Sbjct: 309 LDVERISLV 317
Score = 75 (31.5 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 45 PIALVLAPTRELAQQIQTVAKEFSSALRNI---CIFGG 79
P LVLAPTRELA Q+ +FS +R + ++GG
Sbjct: 75 PQILVLAPTRELAVQVAEAMTDFSKHMRGVNVVALYGG 112
Score = 36 (17.7 bits), Expect = 6.5e-12, Sum P(3) = 6.5e-12
Identities = 6/17 (35%), Positives = 14/17 (82%)
Query: 174 DVNTVNIGSLQLSANHN 190
D+++ IG+++L A+H+
Sbjct: 513 DISSRYIGNIKLFASHS 529
WARNING: HSPs involving 423 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.134 0.384 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 233 233 0.00086 113 3 11 22 0.40 33
32 0.43 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 673
No. of states in DFA: 577 (61 KB)
Total size of DFA: 166 KB (2099 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 21.62u 0.16s 21.78t Elapsed: 00:00:01
Total cpu time: 21.64u 0.16s 21.80t Elapsed: 00:00:01
Start: Thu Aug 15 16:18:52 2013 End: Thu Aug 15 16:18:53 2013
WARNINGS ISSUED: 2