Query psy14091
Match_columns 694
No_of_seqs 397 out of 2862
Neff 9.4
Searched_HMMs 46136
Date Fri Aug 16 19:18:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14091.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14091hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG5184 ATS1 Alpha-tubulin sup 100.0 9.8E-50 2.1E-54 401.4 29.8 357 93-685 57-441 (476)
2 COG5184 ATS1 Alpha-tubulin sup 100.0 1.1E-47 2.4E-52 386.6 30.9 378 39-654 57-464 (476)
3 KOG1427|consensus 100.0 3.2E-40 6.9E-45 310.2 19.8 375 48-656 19-400 (443)
4 KOG1427|consensus 100.0 4.3E-39 9.4E-44 302.6 19.4 330 22-446 47-399 (443)
5 KOG0783|consensus 99.9 1.8E-27 3.9E-32 250.6 14.3 226 38-266 131-362 (1267)
6 KOG0783|consensus 99.9 7.4E-25 1.6E-29 231.1 14.2 221 99-455 137-362 (1267)
7 KOG1428|consensus 99.9 1.1E-23 2.3E-28 229.8 21.5 368 34-466 482-857 (3738)
8 KOG1428|consensus 99.9 4E-23 8.7E-28 225.4 23.8 364 187-687 478-872 (3738)
9 PF13540 RCC1_2: Regulator of 99.1 4.9E-11 1.1E-15 75.5 3.9 30 639-668 1-30 (30)
10 PF00415 RCC1: Regulator of ch 99.1 5E-11 1.1E-15 87.3 4.0 49 604-652 1-51 (51)
11 PF00415 RCC1: Regulator of ch 99.1 1.5E-10 3.3E-15 84.7 4.8 50 154-203 1-51 (51)
12 PF13540 RCC1_2: Regulator of 99.1 1.8E-10 3.8E-15 72.9 4.2 30 430-459 1-30 (30)
13 KOG0941|consensus 98.8 7.9E-11 1.7E-15 127.7 -6.4 133 86-218 15-156 (850)
14 KOG0941|consensus 98.7 1.6E-10 3.6E-15 125.3 -7.4 174 29-208 12-198 (850)
15 KOG3669|consensus 95.8 3.5 7.7E-05 44.5 25.5 69 86-160 228-299 (705)
16 PF11725 AvrE: Pathogenicity f 92.5 2.1 4.6E-05 52.1 14.2 119 86-216 490-632 (1774)
17 PF11725 AvrE: Pathogenicity f 89.8 1.1 2.4E-05 54.3 8.6 81 350-447 734-815 (1774)
18 KOG3669|consensus 89.3 4.2 9.2E-05 44.0 11.4 106 143-262 190-298 (705)
19 KOG0943|consensus 88.1 0.073 1.6E-06 61.0 -2.3 130 135-268 373-507 (3015)
20 KOG0646|consensus 88.0 24 0.00052 37.4 15.6 197 39-266 93-307 (476)
21 KOG4693|consensus 78.4 73 0.0016 31.5 14.7 111 41-162 16-147 (392)
22 KOG0943|consensus 75.2 0.28 6.1E-06 56.5 -3.9 131 30-165 373-507 (3015)
23 KOG1274|consensus 74.8 95 0.0021 36.1 15.2 151 92-267 13-169 (933)
24 PHA03098 kelch-like protein; P 67.5 1.4E+02 0.0031 33.4 15.4 15 42-56 288-302 (534)
25 KOG0291|consensus 66.6 2.4E+02 0.0052 32.3 36.5 68 86-163 147-219 (893)
26 KOG0291|consensus 64.6 2.6E+02 0.0057 32.0 22.0 137 15-165 282-424 (893)
27 PF07569 Hira: TUP1-like enhan 62.0 33 0.00072 33.4 7.7 29 135-163 12-40 (219)
28 smart00706 TECPR Beta propelle 58.0 25 0.00055 22.6 4.3 25 239-263 8-33 (35)
29 smart00706 TECPR Beta propelle 56.5 26 0.00055 22.6 4.1 25 428-452 8-33 (35)
30 KOG0293|consensus 56.2 2.6E+02 0.0057 29.6 12.9 25 190-214 443-469 (519)
31 KOG2106|consensus 54.7 3.2E+02 0.0069 29.8 15.3 61 190-266 214-275 (626)
32 KOG1408|consensus 54.0 3.9E+02 0.0084 30.6 17.2 72 86-161 167-247 (1080)
33 PF07569 Hira: TUP1-like enhan 52.1 89 0.0019 30.4 8.9 30 29-58 11-41 (219)
34 PHA02713 hypothetical protein; 50.9 4.1E+02 0.009 30.0 15.3 16 42-57 297-312 (557)
35 KOG2106|consensus 50.8 3.3E+02 0.0072 29.7 12.9 23 639-661 601-623 (626)
36 KOG1274|consensus 46.3 4.5E+02 0.0098 30.9 14.0 66 43-113 19-88 (933)
37 PLN02153 epithiospecifier prot 45.9 3.7E+02 0.008 28.0 21.1 16 42-57 26-41 (341)
38 COG4257 Vgb Streptogramin lyas 45.4 1.6E+02 0.0034 29.5 9.1 138 93-263 62-205 (353)
39 KOG0649|consensus 43.5 3.3E+02 0.0072 26.8 18.6 39 228-266 236-274 (325)
40 PF04841 Vps16_N: Vps16, N-ter 41.4 4.9E+02 0.011 28.1 18.9 69 189-267 218-288 (410)
41 PLN02153 epithiospecifier prot 40.0 4.5E+02 0.0098 27.3 15.9 18 41-58 130-147 (341)
42 PF07250 Glyoxal_oxid_N: Glyox 38.7 4E+02 0.0087 26.4 12.5 74 141-215 114-189 (243)
43 KOG1900|consensus 38.6 3.4E+02 0.0074 33.3 12.0 102 149-267 93-199 (1311)
44 TIGR03300 assembly_YfgL outer 37.5 5.1E+02 0.011 27.2 13.0 132 94-263 241-376 (377)
45 PF12341 DUF3639: Protein of u 36.0 99 0.0021 19.0 3.9 25 136-160 2-26 (27)
46 cd00200 WD40 WD40 domain, foun 34.8 4.1E+02 0.009 25.4 31.3 107 137-266 95-207 (289)
47 KOG0282|consensus 34.7 1.4E+02 0.003 32.1 7.4 24 32-55 347-370 (503)
48 KOG0646|consensus 33.8 6.4E+02 0.014 27.2 13.8 97 47-160 143-244 (476)
49 COG4257 Vgb Streptogramin lyas 33.0 2.6E+02 0.0057 28.1 8.4 136 40-212 63-205 (353)
50 PF06739 SBBP: Beta-propeller 32.2 47 0.001 22.1 2.4 17 439-455 16-32 (38)
51 PF03785 Peptidase_C25_C: Pept 30.3 63 0.0014 25.6 3.1 32 638-669 17-49 (81)
52 PHA02713 hypothetical protein; 30.2 6.3E+02 0.014 28.5 12.5 15 43-57 346-360 (557)
53 PHA03098 kelch-like protein; P 30.1 8.1E+02 0.018 27.3 15.4 17 42-58 336-352 (534)
54 PF04762 IKI3: IKI3 family; I 28.3 1.1E+03 0.025 28.5 22.5 28 360-387 612-639 (928)
55 PF02239 Cytochrom_D1: Cytochr 26.4 4.4E+02 0.0096 27.9 9.9 114 86-212 28-155 (369)
56 PRK14131 N-acetylneuraminic ac 26.1 8E+02 0.017 25.9 12.9 16 42-57 132-148 (376)
57 KOG4441|consensus 26.1 1E+03 0.022 27.1 13.3 22 365-386 509-530 (571)
58 PHA02790 Kelch-like protein; P 25.2 4.7E+02 0.01 28.9 10.2 15 43-57 313-327 (480)
59 KOG1240|consensus 24.9 1.4E+03 0.03 28.3 16.2 120 137-266 1050-1181(1431)
60 KOG0315|consensus 24.7 7E+02 0.015 24.8 20.3 59 198-266 137-197 (311)
61 PRK14131 N-acetylneuraminic ac 24.4 8.6E+02 0.019 25.7 16.7 17 250-266 336-352 (376)
62 KOG4441|consensus 24.1 1.1E+03 0.023 26.8 13.5 58 202-266 471-531 (571)
63 PF13418 Kelch_4: Galactose ox 23.7 74 0.0016 22.0 2.4 18 646-663 3-20 (49)
64 PF02239 Cytochrom_D1: Cytochr 23.3 9E+02 0.02 25.6 13.4 116 136-264 27-156 (369)
65 PF10168 Nup88: Nuclear pore c 23.2 1.2E+03 0.027 27.2 16.6 119 43-161 36-177 (717)
66 TIGR03548 mutarot_permut cycli 22.6 7.8E+02 0.017 25.2 10.9 102 40-161 115-230 (323)
67 PLN02772 guanylate kinase 22.1 2.1E+02 0.0046 30.5 6.3 64 593-663 24-94 (398)
68 PF04762 IKI3: IKI3 family; I 22.1 1.5E+03 0.032 27.6 18.5 27 136-162 427-455 (928)
69 PF07312 DUF1459: Protein of u 20.5 62 0.0013 25.3 1.4 13 656-668 56-69 (84)
70 KOG0315|consensus 20.3 8.6E+02 0.019 24.2 19.0 60 145-215 136-197 (311)
71 KOG4693|consensus 20.2 2.5E+02 0.0055 27.9 5.8 61 595-663 80-147 (392)
No 1
>COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]
Probab=100.00 E-value=9.8e-50 Score=401.40 Aligned_cols=357 Identities=32% Similarity=0.591 Sum_probs=283.0
Q ss_pred CCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCC-CccEEcCCC--CCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCC
Q psy14091 93 GRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQS-PHPRIIPAL--ANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQL 168 (694)
Q Consensus 93 G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~-~~p~~v~~~--~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gql 168 (694)
-..|...++.-. ||+||.|...|||++..+.. ..|++.+.. +...|++++||..|+++|++||.||+||.|..|+|
T Consensus 57 ~~~~~~~~~~~~~v~~~Gsn~~~eLGlg~de~~~~~P~~~~~~~~d~~~i~~~acGg~hsl~ld~Dg~lyswG~N~~G~L 136 (476)
T COG5184 57 INKHTHLLVKMASVYSWGSNGMNELGLGNDETKVDRPQLNPFGRIDKASIIKIACGGNHSLGLDHDGNLYSWGDNDDGAL 136 (476)
T ss_pred cccchhhhhheeeeEEEecCcceeeccCCchhcccCceecCcccccceeeEEeecCCceEEeecCCCCEEEeccCccccc
Confidence 356666888888 99999999999999986655 899998876 56789999999999999999999999999999999
Q ss_pred CCCCC----------------CCCCCCEEecc----cCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCc
Q psy14091 169 GLNTV----------------EDMSEPQLVKA----LEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKH 228 (694)
Q Consensus 169 g~~~~----------------~~~~~p~~v~~----~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~ 228 (694)
|.... .....|..|+. ....++++++||++++++|+++|.||.||....+.++.+.....
T Consensus 137 gr~~~~~~~~~~~~~~~~~~~~~~~tP~~v~~~s~~~s~~~vv~l~cg~e~svil~~~G~V~~~gt~r~~e~~~g~~~~s 216 (476)
T COG5184 137 GRDIHKDICDQNNDIIDFDDYELESTPFKVPGGSSAKSHLRVVKLACGWEISVILTADGRVYSWGTFRCGELGQGSYKNS 216 (476)
T ss_pred ccccccccccccccccccchhhcccCCceeeccccccCChheEEeecCCceEEEEccCCcEEEecCcccccccccccccc
Confidence 98762 12467888876 23447999999999999999999999999998888777643322
Q ss_pred ccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCC
Q psy14091 229 KVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANN 308 (694)
Q Consensus 229 ~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (694)
.... +
T Consensus 217 ~k~~-~-------------------------------------------------------------------------- 221 (476)
T COG5184 217 QKTS-I-------------------------------------------------------------------------- 221 (476)
T ss_pred ccce-e--------------------------------------------------------------------------
Confidence 1100 0
Q ss_pred CceeeeCCCCCcccccccchhhhccccccccccCCCCccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCC
Q psy14091 309 ETKIHLAPSPSSASEKNETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNV 388 (694)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~ 388 (694)
...|-.+. ...|+++++|..|.++|+++|++|+||+|.
T Consensus 222 --------------------------------------~~~p~~v~----~~~i~qla~G~dh~i~lt~~G~vy~~Gs~q 259 (476)
T COG5184 222 --------------------------------------QFTPLKVP----KKAIVQLAAGADHLIALTNEGKVYGWGSNQ 259 (476)
T ss_pred --------------------------------------eeeeeecC----chheeeeccCCceEEEEecCCcEEEecCCc
Confidence 00111111 246999999999999999999999999999
Q ss_pred CCcCCCCCCcCccCCeeEeecccccccccCcCCCCcccCCCeEEEEecCceeEEEccCCcEEEEcCCCCCCCCccccccc
Q psy14091 389 DGQLGNGSRKEVHTPTAISINIVMTSSEVSSDERSPLLSSSIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPRYIGELL 468 (694)
Q Consensus 389 ~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~ 468 (694)
.||||....+....+..+.-+ +....|..|+||.+|++||+++|+||+||.|.+||||.++..
T Consensus 260 kgqlG~~~~e~~~~~~lv~~~---------------f~i~~i~~vacG~~h~~al~~~G~i~a~G~n~fgqlg~~~~~-- 322 (476)
T COG5184 260 KGQLGRPTSERLKLVVLVGDP---------------FAIRNIKYVACGKDHSLALDEDGEIYAWGVNIFGQLGAGSDG-- 322 (476)
T ss_pred ccccCCchhhhcccccccCCh---------------hhhhhhhhcccCcceEEEEcCCCeEEEeccchhcccccCccc--
Confidence 999998877766655554211 233458999999999999999999999999999999987211
Q ss_pred ccccccCCCCCeeEeeccccCCCcceeeeeecccccceeEeeecCcceeeeeceeeecCCCCccccccccccceeeeeec
Q psy14091 469 FYKFNFDPVGPLVKWIPWFDDSSKKINAITFQSSSASWLLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQ 548 (694)
Q Consensus 469 ~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 548 (694)
+.....+
T Consensus 323 --------~~~a~~t----------------------------------------------------------------- 329 (476)
T COG5184 323 --------EIGALTT----------------------------------------------------------------- 329 (476)
T ss_pred --------ccceeec-----------------------------------------------------------------
Confidence 0111110
Q ss_pred ceeeccCCCCcccccccCCcccccccccccccceeeeeeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCCC--CCCC
Q psy14091 549 GKNVNCENLTPCCLCWWENTLCDKDIVRSHHQMLIMRIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGL--IDQS 625 (694)
Q Consensus 549 g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g~--~~~~ 625 (694)
+++.........|.+|++|..|+++|..+| +|+||++..||||... +...
T Consensus 330 ---------------------------k~~~~~~~~~~~i~~is~ge~H~l~L~~~G~l~a~Gr~~~~qlg~~~~~~~~~ 382 (476)
T COG5184 330 ---------------------------KPNYKQLLSGVTICSISAGESHSLILRKDGTLYAFGRGDRGQLGIQEEITIDV 382 (476)
T ss_pred ---------------------------cccccccCCCceEEEEecCcceEEEEecCceEEEecCCccccccCcccceeec
Confidence 001111112235899999999999999999 9999999999999997 5666
Q ss_pred CCceeecccCCceEEEEecCCCceEEEecCCcEEEEeCCCCCCCCCCCC-CCcCCCeeecc
Q psy14091 626 PHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTV-EDMSEPQLVKA 685 (694)
Q Consensus 626 ~~P~~v~~l~~~~v~~is~G~~h~~al~~dG~v~~WG~n~~GqLG~g~~-~~~~~P~~v~~ 685 (694)
..|..+.... ++++|+||..|+++.+.+|.||+||+|.+||||+|+. .....|+.|+.
T Consensus 383 ~~~~~ls~~~--~~~~v~~gt~~~~~~t~~gsvy~wG~ge~gnlG~g~~~~~~~~pt~i~~ 441 (476)
T COG5184 383 STPTKLSVAI--KLEQVACGTHHNIARTDDGSVYSWGWGEHGNLGNGPKEADVLVPTLIRQ 441 (476)
T ss_pred CCcccccccc--ceEEEEecCccceeeccCCceEEecCchhhhccCCchhhhccccccccc
Confidence 7777776554 4999999999999999999999999999999999976 67788888873
No 2
>COG5184 ATS1 Alpha-tubulin suppressor and related RCC1 domain-containing proteins [Cell division and chromosome partitioning / Cytoskeleton]
Probab=100.00 E-value=1.1e-47 Score=386.63 Aligned_cols=378 Identities=29% Similarity=0.505 Sum_probs=291.5
Q ss_pred cCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eEEEeCCCCCcc
Q psy14091 39 GFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQL 116 (694)
Q Consensus 39 G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqL 116 (694)
-..| .+++.-..||+||.|...|||+|........|+..++..-....|++++||..|+++|+.|| ||+||.|..|+|
T Consensus 57 ~~~~~~~~~~~~~v~~~Gsn~~~eLGlg~de~~~~~P~~~~~~~~d~~~i~~~acGg~hsl~ld~Dg~lyswG~N~~G~L 136 (476)
T COG5184 57 INKHTHLLVKMASVYSWGSNGMNELGLGNDETKVDRPQLNPFGRIDKASIIKIACGGNHSLGLDHDGNLYSWGDNDDGAL 136 (476)
T ss_pred cccchhhhhheeeeEEEecCcceeeccCCchhcccCceecCcccccceeeEEeecCCceEEeecCCCCEEEeccCccccc
Confidence 3445 57778899999999999999999888777789998887655679999999999999999999 999999999999
Q ss_pred CCCCC----------------CCCCccEEcCC----CCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCC
Q psy14091 117 GIGLI----------------DQSPHPRIIPA----LANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDM 176 (694)
Q Consensus 117 G~~~~----------------~~~~~p~~v~~----~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~ 176 (694)
|.... +...+|..++. ....++++++||++++++|+++|+||.||....+.++.+...+.
T Consensus 137 gr~~~~~~~~~~~~~~~~~~~~~~~tP~~v~~~s~~~s~~~vv~l~cg~e~svil~~~G~V~~~gt~r~~e~~~g~~~~s 216 (476)
T COG5184 137 GRDIHKDICDQNNDIIDFDDYELESTPFKVPGGSSAKSHLRVVKLACGWEISVILTADGRVYSWGTFRCGELGQGSYKNS 216 (476)
T ss_pred ccccccccccccccccccchhhcccCCceeeccccccCChheEEeecCCceEEEEccCCcEEEecCcccccccccccccc
Confidence 97651 12457777776 33457999999999999999999999999998888888754443
Q ss_pred CC----CEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEE
Q psy14091 177 SE----PQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNL 252 (694)
Q Consensus 177 ~~----p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~ 252 (694)
.. ++++... ...|+++++|.+|.++|+++|++|.||+|..||||.........+..+
T Consensus 217 ~k~~~~~~p~~v~-~~~i~qla~G~dh~i~lt~~G~vy~~Gs~qkgqlG~~~~e~~~~~~lv------------------ 277 (476)
T COG5184 217 QKTSIQFTPLKVP-KKAIVQLAAGADHLIALTNEGKVYGWGSNQKGQLGRPTSERLKLVVLV------------------ 277 (476)
T ss_pred ccceeeeeeeecC-chheeeeccCCceEEEEecCCcEEEecCCcccccCCchhhhccccccc------------------
Confidence 22 3333332 456999999999999999999999999999999998655443333222
Q ss_pred EEecCCcEEEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhc
Q psy14091 253 ALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYAS 332 (694)
Q Consensus 253 ~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 332 (694)
T Consensus 278 -------------------------------------------------------------------------------- 277 (476)
T COG5184 278 -------------------------------------------------------------------------------- 277 (476)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccccCCCCccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccc
Q psy14091 333 FMQSFLSSADDGMAHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVM 412 (694)
Q Consensus 333 ~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~ 412 (694)
|..+. -..|+.|+||.+|++||+++|+||+||.|.+||||.++ +...++....+.
T Consensus 278 -----------------~~~f~----i~~i~~vacG~~h~~al~~~G~i~a~G~n~fgqlg~~~--~~~~~a~~tk~~-- 332 (476)
T COG5184 278 -----------------GDPFA----IRNIKYVACGKDHSLALDEDGEIYAWGVNIFGQLGAGS--DGEIGALTTKPN-- 332 (476)
T ss_pred -----------------CChhh----hhhhhhcccCcceEEEEcCCCeEEEeccchhcccccCc--ccccceeecccc--
Confidence 00000 01378899999999999999999999999999999982 222222222111
Q ss_pred cccccCcCCCCcccCCCeEEEEecCceeEEEccCCcEEEEcCCCCCCCCcccccccccccccCCCCCeeEeeccccCCCc
Q psy14091 413 TSSEVSSDERSPLLSSSIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKWIPWFDDSSK 492 (694)
Q Consensus 413 ~~~~~~~~~~~~~~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 492 (694)
.+.......|..|++|..|+++|..+|.||+||++..+|||.......
T Consensus 333 --------~~~~~~~~~i~~is~ge~H~l~L~~~G~l~a~Gr~~~~qlg~~~~~~~------------------------ 380 (476)
T COG5184 333 --------YKQLLSGVTICSISAGESHSLILRKDGTLYAFGRGDRGQLGIQEEITI------------------------ 380 (476)
T ss_pred --------ccccCCCceEEEEecCcceEEEEecCceEEEecCCccccccCccccee------------------------
Confidence 011133345899999999999999999999999999999997543211
Q ss_pred ceeeeeecccccceeEeeecCcceeeeeceeeecCCCCccccccccccceeeeeecceeeccCCCCcccccccCCccccc
Q psy14091 493 KINAITFQSSSASWLLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLCWWENTLCDK 572 (694)
Q Consensus 493 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~ 572 (694)
++
T Consensus 381 ~~------------------------------------------------------------------------------ 382 (476)
T COG5184 381 DV------------------------------------------------------------------------------ 382 (476)
T ss_pred ec------------------------------------------------------------------------------
Confidence 00
Q ss_pred ccccccccceeeeeeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCCCC-CCCCCceeecc--cCCceEEEEecCCCc
Q psy14091 573 DIVRSHHQMLIMRIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLI-DQSPHPRIIPA--LANIRVVSISAGQYH 648 (694)
Q Consensus 573 ~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g~~-~~~~~P~~v~~--l~~~~v~~is~G~~h 648 (694)
+.+.++....++.+|+||..|+++.+.+| ||+||.|.+|+||.|+. .....|++++. ++...++...||...
T Consensus 383 ----~~~~~ls~~~~~~~v~~gt~~~~~~t~~gsvy~wG~ge~gnlG~g~~~~~~~~pt~i~~~~~~~~~~i~~g~~~~~ 458 (476)
T COG5184 383 ----STPTKLSVAIKLEQVACGTHHNIARTDDGSVYSWGWGEHGNLGNGPKEADVLVPTLIRQPLLSGHNIILAGYGNQF 458 (476)
T ss_pred ----CCccccccccceEEEEecCccceeeccCCceEEecCchhhhccCCchhhhccccccccccccCCCceEEeccCcce
Confidence 00111122246899999999999999999 99999999999999965 55667777763 666678888888777
Q ss_pred eEEEec
Q psy14091 649 SLAITS 654 (694)
Q Consensus 649 ~~al~~ 654 (694)
++....
T Consensus 459 ~v~~~~ 464 (476)
T COG5184 459 SVIEET 464 (476)
T ss_pred EEEecc
Confidence 766544
No 3
>KOG1427|consensus
Probab=100.00 E-value=3.2e-40 Score=310.22 Aligned_cols=375 Identities=24% Similarity=0.440 Sum_probs=281.1
Q ss_pred CCeEEEEECCCCCccCCCCCCC--ccCCCeeeeeecCCCCcEEEEEeCC--CeEEEEeCCC-eEEEeCCCCCccCCCCCC
Q psy14091 48 NRRVHTWGSSSYGALGNGPTMS--QISEPEPVVWFRNNKIDVSSVACGR--LHTLVLTSSG-VYAWGSSQYGQLGIGLID 122 (694)
Q Consensus 48 ~g~v~~wG~n~~GqLG~g~~~~--~~~~p~~i~~~~~~~~~i~~v~~G~--~h~~~l~~~G-vy~wG~n~~gqLG~~~~~ 122 (694)
-|++..+|.-...+.|.-+-.. ....|.+...+. +.+|.-|+.|. .|+++|+-+| .|.||.|..||||+++..
T Consensus 19 ~g~ml~~g~v~wd~tgkRd~~~~~NL~sphR~~~l~--gv~iR~VasG~~aaH~vli~megk~~~wGRNekGQLGhgD~k 96 (443)
T KOG1427|consen 19 GGEMLFCGAVAWDITGKRDGAMEGNLVSPHRLRPLV--GVNIRFVASGCAAAHCVLIDMEGKCYTWGRNEKGQLGHGDMK 96 (443)
T ss_pred CccEEEeccchhhhhcccccccccccccceeccccc--cceEEEEecccchhhEEEEecccceeecccCccCccCccchh
Confidence 4677777776666655432222 344666665443 34677777665 8999999999 999999999999999999
Q ss_pred CCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCCcEEEE
Q psy14091 123 QSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGHAHSIA 202 (694)
Q Consensus 123 ~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~ 202 (694)
.+..|+.|+.|...+|++.+||++|+++|+++|+||.||.|.+||||+++.......+.+.......|+.|+||.++++.
T Consensus 97 ~~e~Ptvi~gL~~~~iv~AA~GrnHTl~ltdtG~v~afGeNK~GQlGlgn~~~~v~s~~~~~~~~~~v~~v~cga~ftv~ 176 (443)
T KOG1427|consen 97 QRERPTVISGLSKHKIVKAAAGRNHTLVLTDTGQVLAFGENKYGQLGLGNAKNEVESTPLPCVVSDEVTNVACGADFTVW 176 (443)
T ss_pred hccCCchhhhhhhhhHHHHhhccCcEEEEecCCcEEEecccccccccccccccccccCCCccccCccceeeccccceEEE
Confidence 99999999999999999999999999999999999999999999999998654433223333344569999999999999
Q ss_pred EEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhh
Q psy14091 203 LTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARM 282 (694)
Q Consensus 203 lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~ 282 (694)
|+..+.+..+|.-.|||||.+..........- +. ++ +
T Consensus 177 l~~~~si~t~glp~ygqlgh~td~~~~~~~~~------~~-~~-----------------~------------------- 213 (443)
T KOG1427|consen 177 LSSTESILTAGLPQYGQLGHGTDNEFNMKDSS------VR-LA-----------------Y------------------- 213 (443)
T ss_pred eecccceeecCCccccccccCcchhhcccccc------ce-ee-----------------e-------------------
Confidence 99999999999999999999875543211000 00 00 0
Q ss_pred hhcccccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccccccccccCCCCccccCeeeeccCCCCCe
Q psy14091 283 MCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPI 362 (694)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i 362 (694)
. ....|..+. +.....|
T Consensus 214 ---------------e-----------------------------------------------~~pr~~~i~-~~dgvqi 230 (443)
T KOG1427|consen 214 ---------------E-----------------------------------------------AQPRPKAIA-SLDGVQI 230 (443)
T ss_pred ---------------e-----------------------------------------------cCCCccccc-cccceee
Confidence 0 000111111 1223469
Q ss_pred EEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccccccccCcCCCCcccCCCeEEEEecCceeEE
Q psy14091 363 LQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVMTSSEVSSDERSPLLSSSIKHITCGGDFSLA 442 (694)
Q Consensus 363 ~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~ht~a 442 (694)
++++||.+|++|++++++||+||...+|.||+....+...|+.+.+.. .....-.++.||+..++.
T Consensus 231 v~~acg~nhtvavd~nkrVysWGFGGyGRLGHaEqKDEmvpRlik~Fd--------------~~~rg~~~~~~g~t~Sl~ 296 (443)
T KOG1427|consen 231 VKVACGTNHTVAVDKNKRVYSWGFGGYGRLGHAEQKDEMVPRLIKVFD--------------RNNRGPPNAILGYTGSLN 296 (443)
T ss_pred EEEeccCcceeeecCCccEEEeccccccccccccchhhHHHHHHHHhc--------------CCCCCCcceeeeccccee
Confidence 999999999999999999999999999999999888888888886543 234456789999999999
Q ss_pred EccCCcEEEEcCCCCCCCCcccccccccccccCCCCCeeEeeccccCCCcceeeeeecccccceeEeeecCcceeeeece
Q psy14091 443 MDESGKVWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKWIPWFDDSSKKINAITFQSSSASWLLVASYDCSLHIIPVL 522 (694)
Q Consensus 443 lt~~G~vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (694)
+.+-|.||.||.+....= +. +
T Consensus 297 v~e~G~Lf~~g~~k~~ge------~~-----------m------------------------------------------ 317 (443)
T KOG1427|consen 297 VAEGGQLFMWGKIKNNGE------DW-----------M------------------------------------------ 317 (443)
T ss_pred ecccceeEEeeccccCcc------cc-----------c------------------------------------------
Confidence 999999999997643210 00 0
Q ss_pred eeecCCCCccccccccccceeeeeecceeeccCCCCcccccccCCcccccccccccccceeeeeeEEEEecCCcEEEEEE
Q psy14091 523 SIIQNSEPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLCWWENTLCDKDIVRSHHQMLIMRIDVSSVACGRLHTLVLT 602 (694)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~ 602 (694)
.+.+.....+.++..+-++..|.++=.
T Consensus 318 -----------------------------------------------------ypkP~~dlsgwnl~~~~~~~~h~~v~a 344 (443)
T KOG1427|consen 318 -----------------------------------------------------YPKPMMDLSGWNLRWMDSGSMHHFVGA 344 (443)
T ss_pred -----------------------------------------------------CCCchhhcCCccCCCcCccceeeeecc
Confidence 000011111235677888888866555
Q ss_pred CCCEEEeecCCCCcCCCC--CCCCCCCceeecccCCceEEEEecCCCceEEEecCC
Q psy14091 603 SSGVYAWGSSQYGQLGIG--LIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQG 656 (694)
Q Consensus 603 ~~gv~~wG~n~~GqLG~g--~~~~~~~P~~v~~l~~~~v~~is~G~~h~~al~~dG 656 (694)
++-+.+||...+|.++-+ -..+...|..++.+.+..|..|++|..|+++|..+-
T Consensus 345 d~s~i~wg~~~~g~~lggp~~Qkss~~Pk~v~~l~~i~v~~VamGysHs~vivd~t 400 (443)
T KOG1427|consen 345 DSSCISWGHAQYGELLGGPNGQKSSAAPKKVDMLEGIHVMGVAMGYSHSMVIVDRT 400 (443)
T ss_pred cccccccccccccccccCccccccccCccccchhcceeccceeeccceEEEEEccc
Confidence 555999999988876554 336778899999999999999999999999987653
No 4
>KOG1427|consensus
Probab=100.00 E-value=4.3e-39 Score=302.58 Aligned_cols=330 Identities=25% Similarity=0.423 Sum_probs=260.8
Q ss_pred cccCCcccCCCeEEeeecCc--E-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEE
Q psy14091 22 EELSEPLVEIPEVPLSGGFY--H-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTL 98 (694)
Q Consensus 22 ~~~~~~~~~~~i~~v~~G~~--~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~ 98 (694)
++-.++...++|+.|++|.. | ++|+.+|+.|.||.|..||||+++. .+...|+.|+.+... +|++.+||.+|++
T Consensus 47 phR~~~l~gv~iR~VasG~~aaH~vli~megk~~~wGRNekGQLGhgD~-k~~e~Ptvi~gL~~~--~iv~AA~GrnHTl 123 (443)
T KOG1427|consen 47 PHRLRPLVGVNIRFVASGCAAAHCVLIDMEGKCYTWGRNEKGQLGHGDM-KQRERPTVISGLSKH--KIVKAAAGRNHTL 123 (443)
T ss_pred ceeccccccceEEEEecccchhhEEEEecccceeecccCccCccCccch-hhccCCchhhhhhhh--hHHHHhhccCcEE
Confidence 34445667788999998864 5 6778899999999999999999955 445699999888754 8999999999999
Q ss_pred EEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCC--
Q psy14091 99 VLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVED-- 175 (694)
Q Consensus 99 ~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~-- 175 (694)
+|+++| ||+||.|.+||||+++.........++-.....|+.|+||..+++.|+..+.+.++|.-.|||||+++...
T Consensus 124 ~ltdtG~v~afGeNK~GQlGlgn~~~~v~s~~~~~~~~~~v~~v~cga~ftv~l~~~~si~t~glp~ygqlgh~td~~~~ 203 (443)
T KOG1427|consen 124 VLTDTGQVLAFGENKYGQLGLGNAKNEVESTPLPCVVSDEVTNVACGADFTVWLSSTESILTAGLPQYGQLGHGTDNEFN 203 (443)
T ss_pred EEecCCcEEEecccccccccccccccccccCCCccccCccceeeccccceEEEeecccceeecCCccccccccCcchhhc
Confidence 999999 99999999999999986554333333333445699999999999999999999999999999999987432
Q ss_pred ------------CCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCC---C
Q psy14091 176 ------------MSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPE---P 240 (694)
Q Consensus 176 ------------~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~---~ 240 (694)
.+.|..|..+...+|++++||.+|+++++++++||.||..-+|.||.........|..+.-+.. -
T Consensus 204 ~~~~~~~~~~e~~pr~~~i~~~dgvqiv~~acg~nhtvavd~nkrVysWGFGGyGRLGHaEqKDEmvpRlik~Fd~~~rg 283 (443)
T KOG1427|consen 204 MKDSSVRLAYEAQPRPKAIASLDGVQIVKVACGTNHTVAVDKNKRVYSWGFGGYGRLGHAEQKDEMVPRLIKVFDRNNRG 283 (443)
T ss_pred cccccceeeeecCCCccccccccceeeEEEeccCcceeeecCCccEEEeccccccccccccchhhHHHHHHHHhcCCCCC
Confidence 3556777788889999999999999999999999999999999999999988888887754432 3
Q ss_pred eEEEEEccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCc
Q psy14091 241 ISMIATGYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSS 320 (694)
Q Consensus 241 i~~i~~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 320 (694)
-.++.||+..++++.+-|.||.||.+.....
T Consensus 284 ~~~~~~g~t~Sl~v~e~G~Lf~~g~~k~~ge------------------------------------------------- 314 (443)
T KOG1427|consen 284 PPNAILGYTGSLNVAEGGQLFMWGKIKNNGE------------------------------------------------- 314 (443)
T ss_pred CcceeeecccceeecccceeEEeeccccCcc-------------------------------------------------
Confidence 5678999999999999999999998742110
Q ss_pred ccccccchhhhccccccccccCCCCccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCC--c
Q psy14091 321 ASEKNETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSR--K 398 (694)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~--~ 398 (694)
....|..+. .+..-++..+.|+..|.+ +..|..+.+||...+|.++-+.. .
T Consensus 315 -------------------------~~mypkP~~-dlsgwnl~~~~~~~~h~~-v~ad~s~i~wg~~~~g~~lggp~~Qk 367 (443)
T KOG1427|consen 315 -------------------------DWMYPKPMM-DLSGWNLRWMDSGSMHHF-VGADSSCISWGHAQYGELLGGPNGQK 367 (443)
T ss_pred -------------------------cccCCCchh-hcCCccCCCcCccceeee-ecccccccccccccccccccCccccc
Confidence 111222222 122346888999999955 55666899999988876654443 3
Q ss_pred CccCCeeEeecccccccccCcCCCCcccCCCeEEEEecCceeEEEccC
Q psy14091 399 EVHTPTAISINIVMTSSEVSSDERSPLLSSSIKHITCGGDFSLAMDES 446 (694)
Q Consensus 399 ~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~ht~alt~~ 446 (694)
....|.++.. ...-.|-+|+||..|+++|-++
T Consensus 368 ss~~Pk~v~~----------------l~~i~v~~VamGysHs~vivd~ 399 (443)
T KOG1427|consen 368 SSAAPKKVDM----------------LEGIHVMGVAMGYSHSMVIVDR 399 (443)
T ss_pred cccCccccch----------------hcceeccceeeccceEEEEEcc
Confidence 3455665532 4456788999999999998754
No 5
>KOG0783|consensus
Probab=99.95 E-value=1.8e-27 Score=250.63 Aligned_cols=226 Identities=30% Similarity=0.470 Sum_probs=195.5
Q ss_pred ecCcEEEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eEEEeCCCCCcc
Q psy14091 38 GGFYHVALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQL 116 (694)
Q Consensus 38 ~G~~~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqL 116 (694)
+..-|.+++.-..||.||.|.+-.||.|...+. ..|..+.++...+.-+.+|+.+..|++++++.| ||+||.+..|.|
T Consensus 131 ~~~i~~~~d~pndvy~wG~N~N~tLGign~~~~-~~Pe~Vdlf~~Sg~~~~qV~l~kfHSvfl~~kgqvY~cGhG~GGRl 209 (1267)
T KOG0783|consen 131 SSTIHPVLDLPNDVYGWGTNVNNTLGIGNGKEP-SSPERVDLFKTSGQLFSQVQLSKFHSVFLTEKGQVYVCGHGAGGRL 209 (1267)
T ss_pred ccccccccCCccceeEecccccccccccCCCCC-CChHHhHHHHhccHHHHHHHHhhceeeEecCCCcEEEeccCCCCcc
Confidence 344457778889999999999999999987664 489999999888888999999999999999999 999999999999
Q ss_pred CCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCC-CCCCCEEeccc--CCc-eEEE
Q psy14091 117 GIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVE-DMSEPQLVKAL--EHE-VIIS 192 (694)
Q Consensus 117 G~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~-~~~~p~~v~~~--~~~-~i~~ 192 (694)
|+|+......|++|+.+.+.++.+|+....|+++||++|.||+||.|..+|||..+.. ....|..|... ++. .|+.
T Consensus 210 G~gdeq~~~iPkrV~gL~gh~~~qisvs~~HslvLT~~g~Vys~GlN~~hqLG~~~~~~~~~~p~qI~a~r~kg~~~iIg 289 (1267)
T KOG0783|consen 210 GFGDEQYNFIPKRVPGLIGHKVIQISVSHTHSLVLTKFGSVYSWGLNGSHQLGLSNDELKKDDPIQITARRIKGFKQIIG 289 (1267)
T ss_pred CcCcccccccccccccccccceEEEEeecceeEEEeecceEEEeecCcccccCCcCchhhcCchhhhhhHhhcchhhhhh
Confidence 9999888999999999999999999999999999999999999999999999987643 33445444321 222 5899
Q ss_pred EEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCC-cccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 193 AKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTK-HKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 193 i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~-~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
|++|..|+++.++. .||+||.| .||||..+... ..+|..+.++...|..++|....++++++++.+|++-.-
T Consensus 290 vaAg~~hsVawt~~-~VY~wGlN-~GQlGi~~n~~~Vt~Pr~l~~~~~~v~~v~a~~~ATVc~~~~~~i~~~ady 362 (1267)
T KOG0783|consen 290 VAAGKSHSVAWTDT-DVYSWGLN-NGQLGISDNISVVTTPRRLAGLLSPVIHVVATTRATVCLLQNNSIIAFADY 362 (1267)
T ss_pred hhcccceeeeeecc-eEEEeccc-CceecCCCCCceeecchhhcccccceEEEEecCccEEEEecCCcEEEEecc
Confidence 99999999999855 69999998 79999887654 456777777778999999999999999999999998654
No 6
>KOG0783|consensus
Probab=99.92 E-value=7.4e-25 Score=231.11 Aligned_cols=221 Identities=27% Similarity=0.446 Sum_probs=182.7
Q ss_pred EEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCC--CCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCC
Q psy14091 99 VLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALA--NIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVED 175 (694)
Q Consensus 99 ~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~--~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~ 175 (694)
+++.-. ||+||.|.+-.||+++......|.+|..+. +.-+.+|+.+.+|++++++.|+||++|.+..|.||.++...
T Consensus 137 ~~d~pndvy~wG~N~N~tLGign~~~~~~Pe~Vdlf~~Sg~~~~qV~l~kfHSvfl~~kgqvY~cGhG~GGRlG~gdeq~ 216 (1267)
T KOG0783|consen 137 VLDLPNDVYGWGTNVNNTLGIGNGKEPSSPERVDLFKTSGQLFSQVQLSKFHSVFLTEKGQVYVCGHGAGGRLGFGDEQY 216 (1267)
T ss_pred ccCCccceeEecccccccccccCCCCCCChHHhHHHHhccHHHHHHHHhhceeeEecCCCcEEEeccCCCCccCcCcccc
Confidence 344445 999999999999999999999999998775 44578899999999999999999999999999999999888
Q ss_pred CCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCC-cccceeeccCCCCeEEEEEccCeEEEE
Q psy14091 176 MSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTK-HKVPIELYGLPEPISMIATGYFHNLAL 254 (694)
Q Consensus 176 ~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~-~~~p~~~~~~~~~i~~i~~g~~~~~~l 254 (694)
...|++|+.+.+.++.+|++...|+++||++|.||+||.|..+|||..+... ...|.++...
T Consensus 217 ~~iPkrV~gL~gh~~~qisvs~~HslvLT~~g~Vys~GlN~~hqLG~~~~~~~~~~p~qI~a~----------------- 279 (1267)
T KOG0783|consen 217 NFIPKRVPGLIGHKVIQISVSHTHSLVLTKFGSVYSWGLNGSHQLGLSNDELKKDDPIQITAR----------------- 279 (1267)
T ss_pred cccccccccccccceEEEEeecceeEEEeecceEEEeecCcccccCCcCchhhcCchhhhhhH-----------------
Confidence 8999999999999999999999999999999999999999999999865432 2334443111
Q ss_pred ecCCcEEEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccc
Q psy14091 255 GTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFM 334 (694)
Q Consensus 255 ~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 334 (694)
T Consensus 280 -------------------------------------------------------------------------------- 279 (1267)
T KOG0783|consen 280 -------------------------------------------------------------------------------- 279 (1267)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccCCCCccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCc-CccCCeeEeeccccc
Q psy14091 335 QSFLSSADDGMAHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRK-EVHTPTAISINIVMT 413 (694)
Q Consensus 335 ~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~-~~~~p~~v~~~~~~~ 413 (694)
.+. ....|+.|++|..|++|-++. .||+||.|. ||||+.+.. .+..|+.+.
T Consensus 280 -----------------r~k---g~~~iIgvaAg~~hsVawt~~-~VY~wGlN~-GQlGi~~n~~~Vt~Pr~l~------ 331 (1267)
T KOG0783|consen 280 -----------------RIK---GFKQIIGVAAGKSHSVAWTDT-DVYSWGLNN-GQLGISDNISVVTTPRRLA------ 331 (1267)
T ss_pred -----------------hhc---chhhhhhhhcccceeeeeecc-eEEEecccC-ceecCCCCCceeecchhhc------
Confidence 000 012588899999999999865 799999985 999987653 345565442
Q ss_pred ccccCcCCCCcccCCCeEEEEecCceeEEEccCCcEEEEcCC
Q psy14091 414 SSEVSSDERSPLLSSSIKHITCGGDFSLAMDESGKVWAWGTN 455 (694)
Q Consensus 414 ~~~~~~~~~~~~~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n 455 (694)
.....|..++|....|+++++++.+|++-+-
T Consensus 332 -----------~~~~~v~~v~a~~~ATVc~~~~~~i~~~ady 362 (1267)
T KOG0783|consen 332 -----------GLLSPVIHVVATTRATVCLLQNNSIIAFADY 362 (1267)
T ss_pred -----------ccccceEEEEecCccEEEEecCCcEEEEecc
Confidence 3456799999999999999999999998643
No 7
>KOG1428|consensus
Probab=99.92 E-value=1.1e-23 Score=229.82 Aligned_cols=368 Identities=19% Similarity=0.249 Sum_probs=218.8
Q ss_pred EEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeC--CC-eEEEe
Q psy14091 34 VPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTS--SG-VYAWG 109 (694)
Q Consensus 34 ~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~--~G-vy~wG 109 (694)
+.+-.+..+ ++-+.+|+||.-|... .+|+-.... .-++... ..+|++|+.|-+-.+++.- +| ++.-|
T Consensus 482 v~L~~~RE~A~iqa~sGKvYYaGn~t--~~Gl~e~G~-----nWmEL~l--~~~IVq~SVG~D~~~~~~~A~~G~I~~v~ 552 (3738)
T KOG1428|consen 482 VDLHFTREMAFIQARSGKVYYAGNGT--RFGLFETGN-----NWMELCL--PEPIVQISVGIDTIMFRSGAGHGWIASVD 552 (3738)
T ss_pred eecccchhhhhhhhcCccEEEecCcc--EEeEEccCC-----ceEEecC--CCceEEEEeccchhheeeccCcceEEecc
Confidence 344456666 4455799999999754 233322211 1122111 1389999999988777765 45 76666
Q ss_pred CCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCce
Q psy14091 110 SSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEV 189 (694)
Q Consensus 110 ~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~ 189 (694)
+... ....+++...+..+|+.+.+...-.-++.+||++|+.|.... ......+.+..+.+..
T Consensus 553 D~k~----------~~~~Rr~~P~n~rKIv~v~~s~~VY~~vSenGkifM~G~~tm--------~~n~SSqmln~L~~~~ 614 (3738)
T KOG1428|consen 553 DKKR----------NGRLRRLVPSNRRKIVHVCASGHVYGYVSENGKIFMGGLHTM--------RVNVSSQMLNGLDNVM 614 (3738)
T ss_pred Cccc----------ccchhhcCCCCcceeEEEeeeeEEEEEEccCCeEEeecceeE--------EecchHHHhhccccce
Confidence 3221 111222333345678888766666668999999999985321 1112234566778888
Q ss_pred EEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcc-cceeeccCCCCe-EEEEEccCeEEEEecCCcEEEecCCC
Q psy14091 190 IISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHK-VPIELYGLPEPI-SMIATGYFHNLALGTSNRLYTWGSSP 267 (694)
Q Consensus 190 i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~-~p~~~~~~~~~i-~~i~~g~~~~~~l~~~g~v~~wG~~~ 267 (694)
|.+++.|..|.++++++|.||.||.|+.+|+|.-...... .|..- ++. .+|.--..|+..++.--..-.+|...
T Consensus 615 isslAlGKsH~~av~rNG~l~T~GlNN~~QCGRVEs~sTt~s~~~s----~~~e~~iCP~G~HtW~~dt~~VCa~CG~Cs 690 (3738)
T KOG1428|consen 615 ISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTSTTSSPRHS----GRQEYQICPIGEHTWLTDTPSVCAQCGLCS 690 (3738)
T ss_pred eehhhccccceeEEEeCCeEEEEecCCcccccccccccccCCcccc----cceeecccCCccceeecCCcchhhhccccc
Confidence 9999999999999999999999999999999985443221 12111 111 11222223333333222222334443
Q ss_pred cccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccccccccccCCCCcc
Q psy14091 268 QVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFMQSFLSSADDGMAH 347 (694)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (694)
.....+....++....+....+....... .+...-........++.-.... +..........
T Consensus 691 ~~GvaC~~~~RP~G~mC~CG~GES~C~~C----------------G~Cr~C~e~tE~~QPG~aqHvQ--~~staa~QR~~ 752 (3738)
T KOG1428|consen 691 ARGVACGRVPRPKGTMCHCGVGESTCLRC----------------GLCRPCGEVTEPAQPGRAQHVQ--FSSTAAPQRST 752 (3738)
T ss_pred ccccccccCCCCCCcccccCCCcccceec----------------cccccccCcCCcCCCCHHHhhe--ecccccccccc
Confidence 33333333333333333333222221100 0000000000000000000000 00000000111
Q ss_pred ccCeeeecc--CCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccccccccCcCCCCcc
Q psy14091 348 MSPTLVDTS--HVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVMTSSEVSSDERSPL 425 (694)
Q Consensus 348 ~~p~~v~~~--~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~ 425 (694)
..|..+... ...-++.+|+||..|+++|.+|++||++|+|.+||||.|+......|+.|.++
T Consensus 753 ~HPs~V~~sq~~Hdvkv~sVSCG~~HtVlL~sd~~VfTFG~~~HGQLG~GDt~Sk~~Pq~V~~~---------------- 816 (3738)
T KOG1428|consen 753 LHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILP---------------- 816 (3738)
T ss_pred cCchheeeccCCcceeEEEEeccCceEEEEecCCcEEEecCCcccccCcCccccCCCcceEEcC----------------
Confidence 234333322 22347899999999999999999999999999999999999999999999864
Q ss_pred cCCCeEEEEecCceeEEEccCCcEEEEcCCCCCCCCccccc
Q psy14091 426 LSSSIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPRYIGE 466 (694)
Q Consensus 426 ~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~ 466 (694)
.+..+++|++|++|++++..||.||.+|.-..||||++.-+
T Consensus 817 ~~t~~vQVaAGSNHT~l~~~DGsVFTFGaF~KGQL~RP~~e 857 (3738)
T KOG1428|consen 817 SDTVIVQVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGE 857 (3738)
T ss_pred CCCceEEEecCCCceEEEecCCcEEEeccccCccccCcccc
Confidence 34679999999999999999999999999999999987544
No 8
>KOG1428|consensus
Probab=99.91 E-value=4e-23 Score=225.40 Aligned_cols=364 Identities=21% Similarity=0.304 Sum_probs=224.7
Q ss_pred CceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEe--c
Q psy14091 187 HEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTW--G 264 (694)
Q Consensus 187 ~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~w--G 264 (694)
...-+++..+...+++-+.+|+||.-|... .+|.-....... .+ .++++|++|+.|-+.++++.--|.=|+. +
T Consensus 478 ~~qtv~L~~~RE~A~iqa~sGKvYYaGn~t--~~Gl~e~G~nWm--EL-~l~~~IVq~SVG~D~~~~~~~A~~G~I~~v~ 552 (3738)
T KOG1428|consen 478 HPQTVDLHFTREMAFIQARSGKVYYAGNGT--RFGLFETGNNWM--EL-CLPEPIVQISVGIDTIMFRSGAGHGWIASVD 552 (3738)
T ss_pred CchheecccchhhhhhhhcCccEEEecCcc--EEeEEccCCceE--Ee-cCCCceEEEEeccchhheeeccCcceEEecc
Confidence 344667788899999999999999998753 233322222222 22 4567999999999999888755554443 3
Q ss_pred CCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccccccccccCCC
Q psy14091 265 SSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFMQSFLSSADDG 344 (694)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 344 (694)
......+
T Consensus 553 D~k~~~~------------------------------------------------------------------------- 559 (3738)
T KOG1428|consen 553 DKKRNGR------------------------------------------------------------------------- 559 (3738)
T ss_pred Ccccccc-------------------------------------------------------------------------
Confidence 2210000
Q ss_pred CccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCC-----CCcCCCCCCcCccCCeeEeecccccccccCc
Q psy14091 345 MAHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNV-----DGQLGNGSRKEVHTPTAISINIVMTSSEVSS 419 (694)
Q Consensus 345 ~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~-----~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~ 419 (694)
.....| ....+|+.+.+...-.-.++++|++|..|... ..|+=.
T Consensus 560 ~Rr~~P------~n~rKIv~v~~s~~VY~~vSenGkifM~G~~tm~~n~SSqmln------------------------- 608 (3738)
T KOG1428|consen 560 LRRLVP------SNRRKIVHVCASGHVYGYVSENGKIFMGGLHTMRVNVSSQMLN------------------------- 608 (3738)
T ss_pred hhhcCC------CCcceeEEEeeeeEEEEEEccCCeEEeecceeEEecchHHHhh-------------------------
Confidence 000111 12346777766555556789999999998532 112100
Q ss_pred CCCCcccCCCeEEEEecCceeEEEccCCcEEEEcCCCCCCCCcccccccccccccCCCCCeeEeeccccCCCcceeeeee
Q psy14091 420 DERSPLLSSSIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKWIPWFDDSSKKINAITF 499 (694)
Q Consensus 420 ~~~~~~~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~ 499 (694)
.....-|.++|.|..|+++++.+|.||.||-|+.+|+|+-..... .++++.. .+....-.
T Consensus 609 ----~L~~~~isslAlGKsH~~av~rNG~l~T~GlNN~~QCGRVEs~sT------t~s~~~s----------~~~e~~iC 668 (3738)
T KOG1428|consen 609 ----GLDNVMISSLALGKSHGVAVTRNGHLFTWGLNNMNQCGRVESTST------TSSPRHS----------GRQEYQIC 668 (3738)
T ss_pred ----ccccceeehhhccccceeEEEeCCeEEEEecCCcccccccccccc------cCCcccc----------cceeeccc
Confidence 033455889999999999999999999999999999998432211 1111110 11111112
Q ss_pred cccccce-----------eEeeecCcceeeeeceeeecCCCCccccccccccceeeeeecceeeccCCCCccccccc---
Q psy14091 500 QSSSASW-----------LLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLCWW--- 565 (694)
Q Consensus 500 ~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~--- 565 (694)
|-+.-.| ..+++|-.++.-.| .+....+.-+.++.+++..+=-.-..+...|......
T Consensus 669 P~G~HtW~~dt~~VCa~CG~Cs~~GvaC~~~~--------RP~G~mC~CG~GES~C~~CG~Cr~C~e~tE~~QPG~aqHv 740 (3738)
T KOG1428|consen 669 PIGEHTWLTDTPSVCAQCGLCSARGVACGRVP--------RPKGTMCHCGVGESTCLRCGLCRPCGEVTEPAQPGRAQHV 740 (3738)
T ss_pred CCccceeecCCcchhhhcccccccccccccCC--------CCCCcccccCCCcccceeccccccccCcCCcCCCCHHHhh
Confidence 3333333 22333332222222 1222223333344433332111111111111110000
Q ss_pred ---CCccccccccccccccee---eeeeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCCCCCCCCCceeecccCCce
Q psy14091 566 ---ENTLCDKDIVRSHHQMLI---MRIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIR 638 (694)
Q Consensus 566 ---~~~~~~~~~~~~~~~~~~---~~~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~ 638 (694)
.....+..+..|..++.. -..++.+|+||..|+++|.+|+ ||.||.|.+||||.|++.+..+|++|..+++..
T Consensus 741 Q~~staa~QR~~~HPs~V~~sq~~Hdvkv~sVSCG~~HtVlL~sd~~VfTFG~~~HGQLG~GDt~Sk~~Pq~V~~~~~t~ 820 (3738)
T KOG1428|consen 741 QFSSTAAPQRSTLHPSRVILSQGPHDVKVSSVSCGNFHTVLLASDRRVFTFGSNCHGQLGVGDTLSKNTPQQVILPSDTV 820 (3738)
T ss_pred eecccccccccccCchheeeccCCcceeEEEEeccCceEEEEecCCcEEEecCCcccccCcCccccCCCcceEEcCCCCc
Confidence 000011112222222222 2567999999999999999999 999999999999999999999999999999989
Q ss_pred EEEEecCCCceEEEecCCcEEEEeCCCCCCCCCCCC---CCcCCCeeecccc
Q psy14091 639 VVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTV---EDMSEPQLVKALE 687 (694)
Q Consensus 639 v~~is~G~~h~~al~~dG~v~~WG~n~~GqLG~g~~---~~~~~P~~v~~~~ 687 (694)
+++|+||++|++.+.+||+||.+|.-..||||.+-- .=-..|..++++.
T Consensus 821 ~vQVaAGSNHT~l~~~DGsVFTFGaF~KGQL~RP~~e~~~WNA~Pe~v~~~G 872 (3738)
T KOG1428|consen 821 IVQVAAGSNHTILRANDGSVFTFGAFGKGQLARPAGEKAGWNAIPEKVSGFG 872 (3738)
T ss_pred eEEEecCCCceEEEecCCcEEEeccccCccccCccccccccccCCCcCCCCC
Confidence 999999999999999999999999999999997532 2345677777654
No 9
>PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B.
Probab=99.14 E-value=4.9e-11 Score=75.49 Aligned_cols=30 Identities=50% Similarity=0.895 Sum_probs=26.2
Q ss_pred EEEEecCCCceEEEecCCcEEEEeCCCCCC
Q psy14091 639 VVSISAGQYHSLAITSQGKLYTWGWGVHGQ 668 (694)
Q Consensus 639 v~~is~G~~h~~al~~dG~v~~WG~n~~Gq 668 (694)
|++|+||.+|++||++||+||+||+|.+||
T Consensus 1 V~~ia~G~~ht~al~~~g~v~~wG~n~~GQ 30 (30)
T PF13540_consen 1 VVQIACGGYHTCALTSDGEVYCWGDNNYGQ 30 (30)
T ss_dssp EEEEEEESSEEEEEE-TTEEEEEE--TTST
T ss_pred CEEEEecCCEEEEEEcCCCEEEEcCCcCCC
Confidence 789999999999999999999999999998
No 10
>PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS). The interaction of RCC1 with ran probably plays an important role in the regulation of gene expression. RCC1, known as PRP20 or SRM1 in yeast, pim1 in fission yeast and BJ1 in Drosophila, is a protein that contains seven tandem repeats of a domain of about 50 to 60 amino acids. As shown in the following schematic representation, the repeats make up the major part of the length of the protein. Outside the repeat region, there is just a small N-terminal domain of about 40 to 50 residues and, in the Drosophila protein only, a C-terminal domain of about 130 residues. +----+-------+-------+-------+-------+-------+-------+-------+-------------+ |N-t.|Rpt. 1 |Rpt. 2 |Rpt. 3 |Rpt. 4 |Rpt. 5 |Rpt. 6 |Rpt. 7 | C-terminal | +----+-------+-------+-------+-------+-------+-------+-------+-------------+ The RCC1-type of repeat is also found in the X-linked retinitis pigmentosa GTPase regulator []. The RCC repeats form a beta-propeller structure.; PDB: 3MVD_L 3OF7_A 1I2M_D 1A12_B 3KCI_A 4DNV_B 4DNU_A 4D9S_B 4DNW_A.
Probab=99.12 E-value=5e-11 Score=87.29 Aligned_cols=49 Identities=43% Similarity=0.849 Sum_probs=46.2
Q ss_pred CC-EEEeecCCCCcCC-CCCCCCCCCceeecccCCceEEEEecCCCceEEE
Q psy14091 604 SG-VYAWGSSQYGQLG-IGLIDQSPHPRIIPALANIRVVSISAGQYHSLAI 652 (694)
Q Consensus 604 ~g-v~~wG~n~~GqLG-~g~~~~~~~P~~v~~l~~~~v~~is~G~~h~~al 652 (694)
|| ||+||.|.+|||| .++......|++|+.+.+.+|++|+||.+|++||
T Consensus 1 dG~vy~wG~n~~GqLG~~~~~~~~~~P~~v~~~~~~~i~~va~G~~ht~~l 51 (51)
T PF00415_consen 1 DGRVYSWGSNDYGQLGSGGDNKNVSVPTKVPFLSGVRIVQVACGSDHTLAL 51 (51)
T ss_dssp TSEEEEEEEETTSTTSSSSSSSEEEEEEEEGGGTTSEEEEEEEESSEEEEE
T ss_pred CCcEEEEECCCCCCCCCCCCCCceeEEEEECCCCCCCEEEEEeCcceEEEC
Confidence 68 9999999999999 7788889999999999999999999999999997
No 11
>PF00415 RCC1: Regulator of chromosome condensation (RCC1) repeat; InterPro: IPR000408 The regulator of chromosome condensation (RCC1) [] is a eukaryotic protein which binds to chromatin and interacts with ran, a nuclear GTP-binding protein IPR002041 from INTERPRO, to promote the loss of bound GDP and the uptake of fresh GTP, thus acting as a guanine-nucleotide dissociation stimulator (GDS). The interaction of RCC1 with ran probably plays an important role in the regulation of gene expression. RCC1, known as PRP20 or SRM1 in yeast, pim1 in fission yeast and BJ1 in Drosophila, is a protein that contains seven tandem repeats of a domain of about 50 to 60 amino acids. As shown in the following schematic representation, the repeats make up the major part of the length of the protein. Outside the repeat region, there is just a small N-terminal domain of about 40 to 50 residues and, in the Drosophila protein only, a C-terminal domain of about 130 residues. +----+-------+-------+-------+-------+-------+-------+-------+-------------+ |N-t.|Rpt. 1 |Rpt. 2 |Rpt. 3 |Rpt. 4 |Rpt. 5 |Rpt. 6 |Rpt. 7 | C-terminal | +----+-------+-------+-------+-------+-------+-------+-------+-------------+ The RCC1-type of repeat is also found in the X-linked retinitis pigmentosa GTPase regulator []. The RCC repeats form a beta-propeller structure.; PDB: 3MVD_L 3OF7_A 1I2M_D 1A12_B 3KCI_A 4DNV_B 4DNU_A 4D9S_B 4DNW_A.
Probab=99.08 E-value=1.5e-10 Score=84.69 Aligned_cols=50 Identities=34% Similarity=0.573 Sum_probs=47.3
Q ss_pred CCcEEEEeCCCCCCCC-CCCCCCCCCCEEecccCCceEEEEEeCCcEEEEE
Q psy14091 154 QGKLYTWGWGVHGQLG-LNTVEDMSEPQLVKALEHEVIISAKGGHAHSIAL 203 (694)
Q Consensus 154 ~G~v~~wG~n~~gqlg-~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~l 203 (694)
||+||+||.|.+|||| .........|++++.+...+|++|+||.+|+++|
T Consensus 1 dG~vy~wG~n~~GqLG~~~~~~~~~~P~~v~~~~~~~i~~va~G~~ht~~l 51 (51)
T PF00415_consen 1 DGRVYSWGSNDYGQLGSGGDNKNVSVPTKVPFLSGVRIVQVACGSDHTLAL 51 (51)
T ss_dssp TSEEEEEEEETTSTTSSSSSSSEEEEEEEEGGGTTSEEEEEEEESSEEEEE
T ss_pred CCcEEEEECCCCCCCCCCCCCCceeEEEEECCCCCCCEEEEEeCcceEEEC
Confidence 6999999999999999 7778888999999999999999999999999987
No 12
>PF13540 RCC1_2: Regulator of chromosome condensation (RCC1) repeat; PDB: 3QI0_D 1JTD_B 3QHY_B.
Probab=99.07 E-value=1.8e-10 Score=72.93 Aligned_cols=30 Identities=40% Similarity=0.896 Sum_probs=26.0
Q ss_pred eEEEEecCceeEEEccCCcEEEEcCCCCCC
Q psy14091 430 IKHITCGGDFSLAMDESGKVWAWGTNVQGQ 459 (694)
Q Consensus 430 i~~Ia~G~~ht~alt~~G~vy~wG~n~~Gq 459 (694)
|++|+||.+|+++|+++|+||+||.|.+||
T Consensus 1 V~~ia~G~~ht~al~~~g~v~~wG~n~~GQ 30 (30)
T PF13540_consen 1 VVQIACGGYHTCALTSDGEVYCWGDNNYGQ 30 (30)
T ss_dssp EEEEEEESSEEEEEE-TTEEEEEE--TTST
T ss_pred CEEEEecCCEEEEEEcCCCEEEEcCCcCCC
Confidence 689999999999999999999999999998
No 13
>KOG0941|consensus
Probab=98.83 E-value=7.9e-11 Score=127.67 Aligned_cols=133 Identities=32% Similarity=0.618 Sum_probs=118.2
Q ss_pred cEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEc-------CCcE
Q psy14091 86 DVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITS-------QGKL 157 (694)
Q Consensus 86 ~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~-------~G~v 157 (694)
+|.+++||.+|+++++..| +|+||.|.+||+|.+.......|.+++.+.+....+|++|..|+++++. +|.+
T Consensus 15 ~~lq~~cGn~hclal~~~g~~~~wg~~~~g~~~~~~~~~~~~p~~~~sl~g~p~a~v~~g~~hs~~lS~~~~~lt~e~~~ 94 (850)
T KOG0941|consen 15 HILQVGCGNNHCLALSCAGELFVWGMNNNGQLGRALYFPDAKPEPVESLKGVPLAQVSAGEAHSFALSSHTVLLTDEGKV 94 (850)
T ss_pred hhhhhccccHHHHhhhccCCeeeccCCccchhhhhccCCCCCCccchhhcCCcHHHHhcCCCcchhhhhchhhcchhccc
Confidence 7899999999999999999 9999999999999985444444999999999999999999999887766 9999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCCcEEEEEE-cCCeEEEEeCCCCc
Q psy14091 158 YTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGHAHSIALT-KAGRVWAFGSGIFG 218 (694)
Q Consensus 158 ~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt-~~G~v~~wG~n~~g 218 (694)
+.+|....||+|+....+...|..+..+-+..+..|+||..|++++. .-|++|.+|.+..|
T Consensus 95 fs~Ga~~~~q~~h~~~~~~~~~~~v~e~i~~~~t~ia~~~~ht~a~v~~l~qsf~~~~~~sG 156 (850)
T KOG0941|consen 95 FSFGAGSTGQLGHSLTENEVLPLLVLELIGSRVTRIACVRGHTLAIVPRLGQSFSFGKGASG 156 (850)
T ss_pred cccCCcccccccccccccccccHHHHHHHhhhhHHHHHHHHHHHhhhhhhcceeecccCCCC
Confidence 99999999999997777778888877777788999999999998765 46899999998877
No 14
>KOG0941|consensus
Probab=98.75 E-value=1.6e-10 Score=125.26 Aligned_cols=174 Identities=26% Similarity=0.463 Sum_probs=130.7
Q ss_pred cCCCeEEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeC-----
Q psy14091 29 VEIPEVPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTS----- 102 (694)
Q Consensus 29 ~~~~i~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~----- 102 (694)
...++.+++||..| +++...|++++||.|.+||+|.+....... |.+++.+. +....+|++|..|+++++.
T Consensus 12 ~~k~~lq~~cGn~hclal~~~g~~~~wg~~~~g~~~~~~~~~~~~-p~~~~sl~--g~p~a~v~~g~~hs~~lS~~~~~l 88 (850)
T KOG0941|consen 12 NYKHILQVGCGNNHCLALSCAGELFVWGMNNNGQLGRALYFPDAK-PEPVESLK--GVPLAQVSAGEAHSFALSSHTVLL 88 (850)
T ss_pred hhhhhhhhccccHHHHhhhccCCeeeccCCccchhhhhccCCCCC-Cccchhhc--CCcHHHHhcCCCcchhhhhchhhc
Confidence 34568999999999 899999999999999999999995555444 87777654 4578999999999988766
Q ss_pred --CC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEc-CCcEEEEeCCCCCCCCCCCCCCCCC
Q psy14091 103 --SG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITS-QGKLYTWGWGVHGQLGLNTVEDMSE 178 (694)
Q Consensus 103 --~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~-~G~v~~wG~n~~gqlg~~~~~~~~~ 178 (694)
+| ++++|....||+|++.......|..+..+-+..+.+|+||..|+.++-. -|++|..|.+..|. +.......
T Consensus 89 t~e~~~fs~Ga~~~~q~~h~~~~~~~~~~~v~e~i~~~~t~ia~~~~ht~a~v~~l~qsf~~~~~~sGk---~~i~s~s~ 165 (850)
T KOG0941|consen 89 TDEGKVFSFGAGSTGQLGHSLTENEVLPLLVLELIGSRVTRIACVRGHTLAIVPRLGQSFSFGKGASGK---GVIVSLSG 165 (850)
T ss_pred chhccccccCCcccccccccccccccccHHHHHHHhhhhHHHHHHHHHHHhhhhhhcceeecccCCCCC---ceeeccch
Confidence 99 9999999999999977777778888877777889999999999987654 59999999888771 00000011
Q ss_pred CEEeccc---CCceEEEEEeCCcEEEEEEcCCe
Q psy14091 179 PQLVKAL---EHEVIISAKGGHAHSIALTKAGR 208 (694)
Q Consensus 179 p~~v~~~---~~~~i~~i~~G~~~~~~lt~~G~ 208 (694)
+.+.... ....+..+..|.+.+..|...+.
T Consensus 166 ~~~l~~~d~~~~~~~~~~~~g~dq~~~l~~~~~ 198 (850)
T KOG0941|consen 166 EDLLRDHDSEKDHRCSLAFAGGDQTFSLSSKGE 198 (850)
T ss_pred hhhcccccHHHHHHHHHHhcCCCceEEEEeecc
Confidence 1011110 11234457788888888766543
No 15
>KOG3669|consensus
Probab=95.81 E-value=3.5 Score=44.52 Aligned_cols=69 Identities=26% Similarity=0.318 Sum_probs=55.0
Q ss_pred cEEEEEeCC-CeEEEEeCCC--eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEE
Q psy14091 86 DVSSVACGR-LHTLVLTSSG--VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTW 160 (694)
Q Consensus 86 ~i~~v~~G~-~h~~~l~~~G--vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~w 160 (694)
++.+|++|. .-..+++.+| +|.-|-....+.|..-. +...|+.... ++.|+.|....-||+.+|.+|.-
T Consensus 228 ~L~qISagPtg~VwAvt~nG~vf~R~GVsRqNp~GdsWk-dI~tP~~a~~-----~v~iSvGt~t~Waldndg~lwfr 299 (705)
T KOG3669|consen 228 DLSQISAGPTGVVWAVTENGAVFYREGVSRQNPEGDSWK-DIVTPRQALE-----PVCISVGTQTLWALDNDGNLWFR 299 (705)
T ss_pred ccceEeecCcceEEEEeeCCcEEEEecccccCCCCchhh-hccCcccccc-----eEEEEeccceEEEEecCCcEEEE
Confidence 689999999 7788999999 78888877777775443 4555554422 89999999999999999999864
No 16
>PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others. It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas [].
Probab=92.52 E-value=2.1 Score=52.10 Aligned_cols=119 Identities=21% Similarity=0.260 Sum_probs=64.9
Q ss_pred cEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEc--------------CCC-CC--C---cEEEEEec
Q psy14091 86 DVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRII--------------PAL-AN--I---RVVSISAG 144 (694)
Q Consensus 86 ~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v--------------~~~-~~--~---~i~~i~~G 144 (694)
..+.|....++-++.+++| +|+-=....+ .....-...|... ..| .+ . ..++=..|
T Consensus 490 ~A~~VgLs~drLFvADseGkLYsa~l~~~~---~~~~~l~~~p~~~~~~~~~~~G~~~~VtGF~~gd~G~lhAlikd~~G 566 (1774)
T PF11725_consen 490 QAQSVGLSNDRLFVADSEGKLYSADLPAAQ---DNEPKLKLMPEPAYQLLGSALGGDHKVTGFISGDDGQLHALIKDRQG 566 (1774)
T ss_pred hhhheeecCCeEEEEeCCCCEEeccccccc---CCCcceEeccccccccccccccccceeeccccCCCCeeeEEEeccCC
Confidence 6778888888888889999 9975433322 1111111122211 111 11 1 13344567
Q ss_pred CceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCC---CCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCC
Q psy14091 145 QYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMS---EPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGI 216 (694)
Q Consensus 145 ~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~---~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~ 216 (694)
..|+++|.++|.=|.-|+|-.-.|=+....-.. .|..-. + +-.|..-.++|. +|+|+.|-...
T Consensus 567 Q~Hs~aLde~~~~~~pGWNLSd~Lvl~N~~GL~~~~~p~~~~------~--ldl~r~G~v~L~-~G~i~~wD~tt 632 (1774)
T PF11725_consen 567 QRHSHALDEQGSQLQPGWNLSDALVLDNTRGLPKPPAPAPHE------I--LDLGRAGLVGLQ-DGKIQYWDSTT 632 (1774)
T ss_pred ceeeccccccCCccCCCCcccceeEeeccCCCCCCCCCChHH------h--hccccccceeec-cceEeeecCcc
Confidence 788888888888888888765544333322111 121111 2 223555667776 69999996543
No 17
>PF11725 AvrE: Pathogenicity factor; InterPro: IPR021085 This family is secreted by Gram-negative Gammaproteobacteria such as Pseudomonas syringae of tomato and Erwinia amylovora (Fire blight bacteria), amongst others. It is an essential pathogenicity factor of approximately 198 kDa. Its injection into the host-plant is dependent upon the bacterial type III or Hrp secretion system []. The family is long and carries a number of predicted functional regions, including an ERMS or endoplasmic reticulum membrane retention signal at both the C- and the N-termini, a leucine-zipper motif from residues 539-560, and a nuclear localisation signal at 1358-1361. This conserved AvrE-family of effectors is among the few that are required for full virulence of many phytopathogenic pseudomonads, erwinias and pantoeas [].
Probab=89.82 E-value=1.1 Score=54.31 Aligned_cols=81 Identities=10% Similarity=0.161 Sum_probs=49.9
Q ss_pred CeeeeccCCCCCeEEEEecCcee-EEEeCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccccccccCcCCCCcccCC
Q psy14091 350 PTLVDTSHVKAPILQICCGCHHS-MLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVMTSSEVSSDERSPLLSS 428 (694)
Q Consensus 350 p~~v~~~~~~~~i~~I~~G~~h~-~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~ 428 (694)
|..+....+...|++|++-..|. .||+.+|+||+.=.-..-+.-.+ .......++|.++ ...
T Consensus 734 p~~l~~~gl~G~ik~l~lD~~~nL~Alt~~G~Lf~~~k~~WQ~~~~~-~~~~~~W~~v~lP----------------~~~ 796 (1774)
T PF11725_consen 734 PVPLSRPGLSGEIKDLALDEKQNLYALTSTGELFRLPKEAWQGNAEG-DQMAAKWQKVALP----------------DEQ 796 (1774)
T ss_pred CccCCCCCCCcchhheeeccccceeEecCCCceeecCHHHhhCcccC-CccccCceeccCC----------------CCC
Confidence 55555555667899999987754 67899999998543222111111 1112334555442 346
Q ss_pred CeEEEEecCceeEEEccCC
Q psy14091 429 SIKHITCGGDFSLAMDESG 447 (694)
Q Consensus 429 ~i~~Ia~G~~ht~alt~~G 447 (694)
.+..+....+|.+.+.-++
T Consensus 797 ~v~~l~~~~~~~l~~~~~d 815 (1774)
T PF11725_consen 797 PVKSLRTNDDNHLSAQIED 815 (1774)
T ss_pred chhhhhcCCCCceEEEecC
Confidence 7888888888887776444
No 18
>KOG3669|consensus
Probab=89.27 E-value=4.2 Score=43.95 Aligned_cols=106 Identities=20% Similarity=0.188 Sum_probs=66.9
Q ss_pred ecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCC-CCCEEecccCCceEEEEEeCC-cEEEEEEcCCeEEE-EeCCCCcc
Q psy14091 143 AGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDM-SEPQLVKALEHEVIISAKGGH-AHSIALTKAGRVWA-FGSGIFGQ 219 (694)
Q Consensus 143 ~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~-~~p~~v~~~~~~~i~~i~~G~-~~~~~lt~~G~v~~-wG~n~~gq 219 (694)
.|.....+|..+|.+|.- -|.....+. ..-+.+.... .+.+|++|. ....+++.+|.||. .|-....+
T Consensus 190 ~g~~~awAI~s~Gd~y~R-------tGvs~~~P~GraW~~i~~~t--~L~qISagPtg~VwAvt~nG~vf~R~GVsRqNp 260 (705)
T KOG3669|consen 190 LGDDTAWAIRSSGDLYLR-------TGVSVDRPCGRAWKVICPYT--DLSQISAGPTGVVWAVTENGAVFYREGVSRQNP 260 (705)
T ss_pred CCceEEEEEecCCcEEEe-------ccccCCCCCCceeeecCCCC--ccceEeecCcceEEEEeeCCcEEEEecccccCC
Confidence 455566788888888843 121111111 1112222222 488999999 78889999999875 45555555
Q ss_pred cCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEE
Q psy14091 220 LGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYT 262 (694)
Q Consensus 220 lg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~ 262 (694)
.|..=. ...+|... ..++.|+.|....-+|+++|.+|.
T Consensus 261 ~GdsWk-dI~tP~~a----~~~v~iSvGt~t~Waldndg~lwf 298 (705)
T KOG3669|consen 261 EGDSWK-DIVTPRQA----LEPVCISVGTQTLWALDNDGNLWF 298 (705)
T ss_pred CCchhh-hccCcccc----cceEEEEeccceEEEEecCCcEEE
Confidence 443222 33444443 138999999999999999999986
No 19
>KOG0943|consensus
Probab=88.15 E-value=0.073 Score=60.98 Aligned_cols=130 Identities=21% Similarity=0.241 Sum_probs=87.9
Q ss_pred CCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCC--CCCCCCCCCEE-ecccCCceEEEEEeCCcEEEEEEcCCeEEE
Q psy14091 135 NIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGL--NTVEDMSEPQL-VKALEHEVIISAKGGHAHSIALTKAGRVWA 211 (694)
Q Consensus 135 ~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~--~~~~~~~~p~~-v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~ 211 (694)
..+++.|.+-.+.-++|..+|++|.|-+...--|-. ....+...|.. .-.+.+.+|+.+++..-..-++|++|+|..
T Consensus 373 an~~I~I~A~s~el~AlhrkGelYqWaWdESEglddplai~kn~dHPd~a~iG~hge~ii~lSanniR~si~T~nghlas 452 (3015)
T KOG0943|consen 373 ANKFICIGALSSELLALHRKGELYQWAWDESEGLDDPLAINKNLDHPDAAFIGLHGEKIILLSANNIRASIATENGHLAS 452 (3015)
T ss_pred CCeeEEeehhHHHHHHHhhCCceeeeecccccCCCChhhcccCCCCCccceecccCCeeEEeecCceeeeeeecCCchhh
Confidence 346888888888889999999999999876543332 11222233322 124567899999999999999999999999
Q ss_pred EeCCCCcccCCCCCCC--cccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCCCc
Q psy14091 212 FGSGIFGQLGTGSNTK--HKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSSPQ 268 (694)
Q Consensus 212 wG~n~~gqlg~~~~~~--~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~~~ 268 (694)
|=+ ++|.+...+ ...-+++..-...+++.-|...|.++..+++.+|-||--..
T Consensus 453 WlD----EcgagV~fkLa~ea~Tkieed~~maVqd~~~adhlaAf~~dniihWcGiVPf 507 (3015)
T KOG0943|consen 453 WLD----ECGAGVAFKLAHEAQTKIEEDGEMAVQDHCCADHLAAFLEDNIIHWCGIVPF 507 (3015)
T ss_pred HHh----hhhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHhhhceeeEEeeeee
Confidence 943 233322221 11222222222356677788899999999999999997643
No 20
>KOG0646|consensus
Probab=87.97 E-value=24 Score=37.36 Aligned_cols=197 Identities=13% Similarity=0.212 Sum_probs=91.1
Q ss_pred cCcEEEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEE--eCCC-eEEEeCCCCCc
Q psy14091 39 GFYHVALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVL--TSSG-VYAWGSSQYGQ 115 (694)
Q Consensus 39 G~~~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l--~~~G-vy~wG~n~~gq 115 (694)
|.+-++-+..|++|+|=-++ |.| +..+...-..|+.+....+-.+++ .+|| |++|=.-.--
T Consensus 93 G~~l~ag~i~g~lYlWelss-G~L--------------L~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv- 156 (476)
T KOG0646|consen 93 GYFLLAGTISGNLYLWELSS-GIL--------------LNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLV- 156 (476)
T ss_pred ceEEEeecccCcEEEEEecc-ccH--------------HHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeec-
Confidence 43446666899999997654 222 111111112455555555545555 4578 9988643211
Q ss_pred cCCCCCCCCCccEEcCCCCC--CcEEEEEecCce--EEE--EEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCce
Q psy14091 116 LGIGLIDQSPHPRIIPALAN--IRVVSISAGQYH--SLA--ITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEV 189 (694)
Q Consensus 116 LG~~~~~~~~~p~~v~~~~~--~~i~~i~~G~~~--s~~--lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~ 189 (694)
. ..+...|.++..+.+ ..|.++.+|..- +-+ ...|..+-+|--.. | ..-..+......+
T Consensus 157 --~--a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~-g----------~LLlti~fp~si~ 221 (476)
T KOG0646|consen 157 --S--ADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLSL-G----------VLLLTITFPSSIK 221 (476)
T ss_pred --c--cccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEecc-c----------eeeEEEecCCcce
Confidence 1 111113333333433 358888877653 111 12344444553211 1 1111111112222
Q ss_pred EEEEEeCCcEEEEEEcCCeEEEEeCCC-Cccc-CCCCCCCcccceeec---cCC--CCeEEEEEccCeEEEE--ecCCcE
Q psy14091 190 IISAKGGHAHSIALTKAGRVWAFGSGI-FGQL-GTGSNTKHKVPIELY---GLP--EPISMIATGYFHNLAL--GTSNRL 260 (694)
Q Consensus 190 i~~i~~G~~~~~~lt~~G~v~~wG~n~-~gql-g~~~~~~~~~p~~~~---~~~--~~i~~i~~g~~~~~~l--~~~g~v 260 (694)
-+.+.-...+.++=+++|.+|..=... .||- +.........-+++. +-. ..|..++-..+-++.+ ++||+|
T Consensus 222 av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ITcLais~DgtlLlSGd~dg~V 301 (476)
T KOG0646|consen 222 AVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESAITCLAISTDGTLLLSGDEDGKV 301 (476)
T ss_pred eEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcceeEEEEecCccEEEeeCCCCCE
Confidence 334445677777888899888653221 1110 000000001111111 111 2566666666666655 467777
Q ss_pred EEecCC
Q psy14091 261 YTWGSS 266 (694)
Q Consensus 261 ~~wG~~ 266 (694)
-+|--.
T Consensus 302 cvWdi~ 307 (476)
T KOG0646|consen 302 CVWDIY 307 (476)
T ss_pred EEEecc
Confidence 777654
No 21
>KOG4693|consensus
Probab=78.36 E-value=73 Score=31.46 Aligned_cols=111 Identities=19% Similarity=0.255 Sum_probs=54.0
Q ss_pred cEEEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEe-----------------CCCeEEEEeCC
Q psy14091 41 YHVALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVAC-----------------GRLHTLVLTSS 103 (694)
Q Consensus 41 ~~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~-----------------G~~h~~~l~~~ 103 (694)
+|.++...-++|+||---.|. . -+...|.-+-.+...+.+.+++-- -..|+++.-+|
T Consensus 16 NHAavaVG~riYSFGGYCsGe-----d-y~~~~piDVH~lNa~~~RWtk~pp~~~ka~i~~~yp~VPyqRYGHtvV~y~d 89 (392)
T KOG4693|consen 16 NHAAVAVGSRIYSFGGYCSGE-----D-YDAKDPIDVHVLNAENYRWTKMPPGITKATIESPYPAVPYQRYGHTVVEYQD 89 (392)
T ss_pred cceeeeecceEEecCCccccc-----c-cccCCcceeEEeeccceeEEecCcccccccccCCCCccchhhcCceEEEEcc
Confidence 356777778999998533321 1 122344444333333222222221 24788888887
Q ss_pred CeEEEeC-CC-CCccCCCCCCCCCccEEcCCCCCCcEEEEE--ecCceEEEEEcCCcEEEEeC
Q psy14091 104 GVYAWGS-SQ-YGQLGIGLIDQSPHPRIIPALANIRVVSIS--AGQYHSLAITSQGKLYTWGW 162 (694)
Q Consensus 104 Gvy~wG~-n~-~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~--~G~~~s~~lt~~G~v~~wG~ 162 (694)
.+|.||- |+ .|.+-.- -...|..-.- ...+|.-.. +-+.|++++-.+ ++|.+|-
T Consensus 90 ~~yvWGGRND~egaCN~L---y~fDp~t~~W-~~p~v~G~vPgaRDGHsAcV~gn-~MyiFGG 147 (392)
T KOG4693|consen 90 KAYVWGGRNDDEGACNLL---YEFDPETNVW-KKPEVEGFVPGARDGHSACVWGN-QMYIFGG 147 (392)
T ss_pred eEEEEcCccCccccccee---eeeccccccc-cccceeeecCCccCCceeeEECc-EEEEecC
Confidence 7999984 33 2322110 0111111000 001122211 335788877654 8999983
No 22
>KOG0943|consensus
Probab=75.22 E-value=0.28 Score=56.50 Aligned_cols=131 Identities=11% Similarity=0.124 Sum_probs=82.4
Q ss_pred CCCeEEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCc-cCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eE
Q psy14091 30 EIPEVPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQ-ISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VY 106 (694)
Q Consensus 30 ~~~i~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~-~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy 106 (694)
..+++.|.+=.+- +||..+|++|.|-....--|-.+-.... ..-|. -.++...+.+|+.+++..--.-++|++| |-
T Consensus 373 an~~I~I~A~s~el~AlhrkGelYqWaWdESEglddplai~kn~dHPd-~a~iG~hge~ii~lSanniR~si~T~nghla 451 (3015)
T KOG0943|consen 373 ANKFICIGALSSELLALHRKGELYQWAWDESEGLDDPLAINKNLDHPD-AAFIGLHGEKIILLSANNIRASIATENGHLA 451 (3015)
T ss_pred CCeeEEeehhHHHHHHHhhCCceeeeecccccCCCChhhcccCCCCCc-cceecccCCeeEEeecCceeeeeeecCCchh
Confidence 4456666666665 7899999999999876544433212111 11222 2233345668999999999999999999 98
Q ss_pred EEeCCCCCccCCCCCCCC-CccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCC
Q psy14091 107 AWGSSQYGQLGIGLIDQS-PHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVH 165 (694)
Q Consensus 107 ~wG~n~~gqLG~~~~~~~-~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~ 165 (694)
+|=.- +|.+..... ...+.-....+..+++.-|...|.++..+|..+|.||.-.+
T Consensus 452 sWlDE----cgagV~fkLa~ea~Tkieed~~maVqd~~~adhlaAf~~dniihWcGiVPf 507 (3015)
T KOG0943|consen 452 SWLDE----CGAGVAFKLAHEAQTKIEEDGEMAVQDHCCADHLAAFLEDNIIHWCGIVPF 507 (3015)
T ss_pred hHHhh----hhhhhhhhhhhhhhhhhhhhhHHHHHHHHHHHHHHHHhhhceeeEEeeeee
Confidence 88532 222211110 01111112345567777888899999999999999996443
No 23
>KOG1274|consensus
Probab=74.78 E-value=95 Score=36.08 Aligned_cols=151 Identities=15% Similarity=0.092 Sum_probs=78.3
Q ss_pred eCCCeEEEEeCCC--eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEE--EEeCCCCCC
Q psy14091 92 CGRLHTLVLTSSG--VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLY--TWGWGVHGQ 167 (694)
Q Consensus 92 ~G~~h~~~l~~~G--vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~--~wG~n~~gq 167 (694)
.++...++++.+| ++++|.+..=..-. ...+...|..+.. .+..|..|+|-..|.+.-++++.|- .++....+
T Consensus 13 t~G~t~i~~d~~gefi~tcgsdg~ir~~~-~~sd~e~P~ti~~-~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~~- 89 (933)
T KOG1274|consen 13 TGGLTLICYDPDGEFICTCGSDGDIRKWK-TNSDEEEPETIDI-SGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEED- 89 (933)
T ss_pred cCceEEEEEcCCCCEEEEecCCCceEEee-cCCcccCCchhhc-cCceeEEEeecccceEEeeccceEEEeeCCCCCcc-
Confidence 3456678888888 99999865322111 1112245555543 4566888999999998888888764 44322211
Q ss_pred CCCCCCCCCCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEc
Q psy14091 168 LGLNTVEDMSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATG 247 (694)
Q Consensus 168 lg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g 247 (694)
..-.+.. ...+.. ++.-+|+..+.|..++.---... .....-..+.+...+|.++..-
T Consensus 90 ---------~iL~Rft--lp~r~~----------~v~g~g~~iaagsdD~~vK~~~~-~D~s~~~~lrgh~apVl~l~~~ 147 (933)
T KOG1274|consen 90 ---------TILARFT--LPIRDL----------AVSGSGKMIAAGSDDTAVKLLNL-DDSSQEKVLRGHDAPVLQLSYD 147 (933)
T ss_pred ---------ceeeeee--ccceEE----------EEecCCcEEEeecCceeEEEEec-cccchheeecccCCceeeeeEc
Confidence 0001111 011122 23334444444444332111110 1111122223444566666543
Q ss_pred --cCeEEEEecCCcEEEecCCC
Q psy14091 248 --YFHNLALGTSNRLYTWGSSP 267 (694)
Q Consensus 248 --~~~~~~l~~~g~v~~wG~~~ 267 (694)
..+....+-||+|++|-..+
T Consensus 148 p~~~fLAvss~dG~v~iw~~~~ 169 (933)
T KOG1274|consen 148 PKGNFLAVSSCDGKVQIWDLQD 169 (933)
T ss_pred CCCCEEEEEecCceEEEEEccc
Confidence 45666678999999997653
No 24
>PHA03098 kelch-like protein; Provisional
Probab=67.49 E-value=1.4e+02 Score=33.42 Aligned_cols=15 Identities=20% Similarity=0.151 Sum_probs=11.8
Q ss_pred EEEEEeCCeEEEEEC
Q psy14091 42 HVALVRNRRVHTWGS 56 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~ 56 (694)
|.++..++.||++|-
T Consensus 288 ~~~~~~~~~lyv~GG 302 (534)
T PHA03098 288 FGSVVLNNVIYFIGG 302 (534)
T ss_pred ceEEEECCEEEEECC
Confidence 356677899999994
No 25
>KOG0291|consensus
Probab=66.61 E-value=2.4e+02 Score=32.30 Aligned_cols=68 Identities=16% Similarity=0.288 Sum_probs=40.9
Q ss_pred cEEEEEeCCCeEEEEeC--CC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEE--EecCceEEEEEcCCcEEEE
Q psy14091 86 DVSSVACGRLHTLVLTS--SG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSI--SAGQYHSLAITSQGKLYTW 160 (694)
Q Consensus 86 ~i~~v~~G~~h~~~l~~--~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i--~~G~~~s~~lt~~G~v~~w 160 (694)
+|+.|.-..+.-++++. |- +..||.+..-- ..|..+..-.+. |+.. .+-..+.+-+.+||.++.|
T Consensus 147 di~si~Ws~DSr~l~~gsrD~s~rl~~v~~~k~---------~~~~~l~gHkd~-VvacfF~~~~~~l~tvskdG~l~~W 216 (893)
T KOG0291|consen 147 DITSIDWSDDSRLLVTGSRDLSARLFGVDGNKN---------LFTYALNGHKDY-VVACFFGANSLDLYTVSKDGALFVW 216 (893)
T ss_pred ceeEEEeccCCceEEeccccceEEEEEeccccc---------cceEeccCCCcc-eEEEEeccCcceEEEEecCceEEEE
Confidence 67788777777666653 33 77777544221 223333322222 4332 2345677889999999999
Q ss_pred eCC
Q psy14091 161 GWG 163 (694)
Q Consensus 161 G~n 163 (694)
..+
T Consensus 217 ~~~ 219 (893)
T KOG0291|consen 217 TCD 219 (893)
T ss_pred Eec
Confidence 987
No 26
>KOG0291|consensus
Probab=64.65 E-value=2.6e+02 Score=32.03 Aligned_cols=137 Identities=16% Similarity=0.054 Sum_probs=75.8
Q ss_pred hcCCCCCcccCCcccCCCeEEeeecCcE---EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEE
Q psy14091 15 TQIPSEPEELSEPLVEIPEVPLSGGFYH---VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVA 91 (694)
Q Consensus 15 ~~~~~~~~~~~~~~~~~~i~~v~~G~~~---~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~ 91 (694)
.+|.+....+++.....-|-+++.+..- +++...|.=.++|...-|||+.=.=......-.+-. .-.++..++
T Consensus 282 vgFssG~f~LyelP~f~lih~LSis~~~I~t~~~N~tGDWiA~g~~klgQLlVweWqsEsYVlKQQg----H~~~i~~l~ 357 (893)
T KOG0291|consen 282 VGFSSGEFGLYELPDFNLIHSLSISDQKILTVSFNSTGDWIAFGCSKLGQLLVWEWQSESYVLKQQG----HSDRITSLA 357 (893)
T ss_pred EEecCCeeEEEecCCceEEEEeecccceeeEEEecccCCEEEEcCCccceEEEEEeeccceeeeccc----cccceeeEE
Confidence 4566666667777777778888888554 445567999999999988887532111100000000 011444444
Q ss_pred eCCCeEEEE--eCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCC
Q psy14091 92 CGRLHTLVL--TSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVH 165 (694)
Q Consensus 92 ~G~~h~~~l--~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~ 165 (694)
-..+-.++. .+|| |=.|-....-.+ -+.-+.-+....++...-.+..+...=||+|-+|-...+
T Consensus 358 YSpDgq~iaTG~eDgKVKvWn~~SgfC~----------vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlkRY 424 (893)
T KOG0291|consen 358 YSPDGQLIATGAEDGKVKVWNTQSGFCF----------VTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLKRY 424 (893)
T ss_pred ECCCCcEEEeccCCCcEEEEeccCceEE----------EEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeeccc
Confidence 444433332 2355 555543321110 011112234456677777777788888999999975543
No 27
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=61.99 E-value=33 Score=33.36 Aligned_cols=29 Identities=34% Similarity=0.442 Sum_probs=24.9
Q ss_pred CCcEEEEEecCceEEEEEcCCcEEEEeCC
Q psy14091 135 NIRVVSISAGQYHSLAITSQGKLYTWGWG 163 (694)
Q Consensus 135 ~~~i~~i~~G~~~s~~lt~~G~v~~wG~n 163 (694)
+.+++.+.|-..+-++||++|.+|+|--.
T Consensus 12 gs~~~~l~~~~~~Ll~iT~~G~l~vWnl~ 40 (219)
T PF07569_consen 12 GSPVSFLECNGSYLLAITSSGLLYVWNLK 40 (219)
T ss_pred CCceEEEEeCCCEEEEEeCCCeEEEEECC
Confidence 34688899999999999999999999643
No 28
>smart00706 TECPR Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins.
Probab=58.02 E-value=25 Score=22.64 Aligned_cols=25 Identities=12% Similarity=0.210 Sum_probs=22.4
Q ss_pred CCeEEEEEcc-CeEEEEecCCcEEEe
Q psy14091 239 EPISMIATGY-FHNLALGTSNRLYTW 263 (694)
Q Consensus 239 ~~i~~i~~g~-~~~~~l~~~g~v~~w 263 (694)
..+++|++|. +...+++.+|+||..
T Consensus 8 g~l~~isvg~~~~vW~V~~~g~i~~r 33 (35)
T smart00706 8 GELVQVSVGPSDTVWAVNSDGNIYRR 33 (35)
T ss_pred CCEEEEEECCCCeEEEEcCCCCEEEE
Confidence 5789999999 999999999999863
No 29
>smart00706 TECPR Beta propeller repeats in Physarum polycephalum tectonins, Limulus lectin L-6 and animal hypothetical proteins.
Probab=56.54 E-value=26 Score=22.63 Aligned_cols=25 Identities=16% Similarity=0.436 Sum_probs=22.2
Q ss_pred CCeEEEEecC-ceeEEEccCCcEEEE
Q psy14091 428 SSIKHITCGG-DFSLAMDESGKVWAW 452 (694)
Q Consensus 428 ~~i~~Ia~G~-~ht~alt~~G~vy~w 452 (694)
..+++|++|. +...+++.+|.||..
T Consensus 8 g~l~~isvg~~~~vW~V~~~g~i~~r 33 (35)
T smart00706 8 GELVQVSVGPSDTVWAVNSDGNIYRR 33 (35)
T ss_pred CCEEEEEECCCCeEEEEcCCCCEEEE
Confidence 5789999999 899999999999963
No 30
>KOG0293|consensus
Probab=56.22 E-value=2.6e+02 Score=29.60 Aligned_cols=25 Identities=20% Similarity=0.351 Sum_probs=16.3
Q ss_pred EEEEEeCCcEEEEE--EcCCeEEEEeC
Q psy14091 190 IISAKGGHAHSIAL--TKAGRVWAFGS 214 (694)
Q Consensus 190 i~~i~~G~~~~~~l--t~~G~v~~wG~ 214 (694)
|.+-..|.+..++. .+|++||.|-.
T Consensus 443 IrSCFgg~~~~fiaSGSED~kvyIWhr 469 (519)
T KOG0293|consen 443 IRSCFGGGNDKFIASGSEDSKVYIWHR 469 (519)
T ss_pred EEeccCCCCcceEEecCCCceEEEEEc
Confidence 44445555545554 48999999954
No 31
>KOG2106|consensus
Probab=54.73 E-value=3.2e+02 Score=29.81 Aligned_cols=61 Identities=13% Similarity=0.128 Sum_probs=32.3
Q ss_pred EEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccC-eEEEEecCCcEEEecCC
Q psy14091 190 IISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYF-HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 190 i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~-~~~~l~~~g~v~~wG~~ 266 (694)
-.-|.||..|.++.+..|..+.=-...+.+ + ....|..+..+.+ -.+-=+.+|.+++|+..
T Consensus 214 nliit~Gk~H~~Fw~~~~~~l~k~~~~fek-----------~-----ekk~Vl~v~F~engdviTgDS~G~i~Iw~~~ 275 (626)
T KOG2106|consen 214 NLIITCGKGHLYFWTLRGGSLVKRQGIFEK-----------R-----EKKFVLCVTFLENGDVITGDSGGNILIWSKG 275 (626)
T ss_pred cEEEEeCCceEEEEEccCCceEEEeecccc-----------c-----cceEEEEEEEcCCCCEEeecCCceEEEEeCC
Confidence 344788888888877666544321111110 0 0012444444433 33334678899999875
No 32
>KOG1408|consensus
Probab=54.04 E-value=3.9e+02 Score=30.59 Aligned_cols=72 Identities=28% Similarity=0.293 Sum_probs=42.1
Q ss_pred cEEEEEeCCCeEEEEeCCC--eEEEeCCCCCccCCCCCCCCCccEEcCC---CCCCcEEEEEecCc----eEEEEEcCCc
Q psy14091 86 DVSSVACGRLHTLVLTSSG--VYAWGSSQYGQLGIGLIDQSPHPRIIPA---LANIRVVSISAGQY----HSLAITSQGK 156 (694)
Q Consensus 86 ~i~~v~~G~~h~~~l~~~G--vy~wG~n~~gqLG~~~~~~~~~p~~v~~---~~~~~i~~i~~G~~----~s~~lt~~G~ 156 (694)
+|..|+...+-++++|... |=-|=. |.+.......+.|-+--. +....+..|+||.. .+++||..|.
T Consensus 167 ~Vsav~fsEdgSYfvT~gnrHvk~wyl----~~~~KykdpiPl~gRs~~lg~lr~n~f~avaCg~gicAestfait~qGh 242 (1080)
T KOG1408|consen 167 VVSAVAFSEDGSYFVTSGNRHVKLWYL----QIQSKYKDPIPLPGRSYFLGNLRFNEFLAVACGVGICAESTFAITAQGH 242 (1080)
T ss_pred eEEEEEEccCCceeeeeeeeeEEEEEe----eccccccCCccccchhhhccccccchhhhhhhcCcccccceEEEecccc
Confidence 5677777777777777665 444421 111111111222222111 23345888999987 9999999999
Q ss_pred EEEEe
Q psy14091 157 LYTWG 161 (694)
Q Consensus 157 v~~wG 161 (694)
+.-|-
T Consensus 243 LvEFS 247 (1080)
T KOG1408|consen 243 LVEFS 247 (1080)
T ss_pred eeeec
Confidence 98774
No 33
>PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin. These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus
Probab=52.11 E-value=89 Score=30.40 Aligned_cols=30 Identities=13% Similarity=0.115 Sum_probs=23.0
Q ss_pred cCCCeEEeeecCcE-EEEEeCCeEEEEECCC
Q psy14091 29 VEIPEVPLSGGFYH-VALVRNRRVHTWGSSS 58 (694)
Q Consensus 29 ~~~~i~~v~~G~~~-~~l~~~g~v~~wG~n~ 58 (694)
.+-++..+.+-..+ ++||.+|.+|+|=-..
T Consensus 11 Lgs~~~~l~~~~~~Ll~iT~~G~l~vWnl~~ 41 (219)
T PF07569_consen 11 LGSPVSFLECNGSYLLAITSSGLLYVWNLKK 41 (219)
T ss_pred cCCceEEEEeCCCEEEEEeCCCeEEEEECCC
Confidence 34466777777777 8999999999996443
No 34
>PHA02713 hypothetical protein; Provisional
Probab=50.90 E-value=4.1e+02 Score=30.00 Aligned_cols=16 Identities=6% Similarity=0.077 Sum_probs=11.7
Q ss_pred EEEEEeCCeEEEEECC
Q psy14091 42 HVALVRNRRVHTWGSS 57 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~n 57 (694)
|.+..-+++||+.|-.
T Consensus 297 ~~~a~l~~~IYviGG~ 312 (557)
T PHA02713 297 YASAIVDNEIIIAGGY 312 (557)
T ss_pred eEEEEECCEEEEEcCC
Confidence 4455568999999953
No 35
>KOG2106|consensus
Probab=50.78 E-value=3.3e+02 Score=29.69 Aligned_cols=23 Identities=13% Similarity=0.328 Sum_probs=18.6
Q ss_pred EEEEecCCCceEEEecCCcEEEE
Q psy14091 639 VVSISAGQYHSLAITSQGKLYTW 661 (694)
Q Consensus 639 v~~is~G~~h~~al~~dG~v~~W 661 (694)
-++..|++.|.+..-.|-.|+-|
T Consensus 601 ~V~Fl~~d~~li~tg~D~Si~qW 623 (626)
T KOG2106|consen 601 NVAFLCKDSHLISTGKDTSIMQW 623 (626)
T ss_pred EEEEeeCCceEEecCCCceEEEE
Confidence 46778888888887788888888
No 36
>KOG1274|consensus
Probab=46.32 E-value=4.5e+02 Score=30.90 Aligned_cols=66 Identities=26% Similarity=0.195 Sum_probs=39.3
Q ss_pred EEEEeCC-eEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC---eEEEeCCCC
Q psy14091 43 VALVRNR-RVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG---VYAWGSSQY 113 (694)
Q Consensus 43 ~~l~~~g-~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G---vy~wG~n~~ 113 (694)
++++.+| .|+++|.+..= -.=........|..|.. ....|..++|-.+|.+.-+.++ +|-+++...
T Consensus 19 i~~d~~gefi~tcgsdg~i--r~~~~~sd~e~P~ti~~---~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~ 88 (933)
T KOG1274|consen 19 ICYDPDGEFICTCGSDGDI--RKWKTNSDEEEPETIDI---SGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEE 88 (933)
T ss_pred EEEcCCCCEEEEecCCCce--EEeecCCcccCCchhhc---cCceeEEEeecccceEEeeccceEEEeeCCCCCc
Confidence 5566555 45555554211 11111112235666653 3447999999999999999998 787776543
No 37
>PLN02153 epithiospecifier protein
Probab=45.85 E-value=3.7e+02 Score=27.97 Aligned_cols=16 Identities=19% Similarity=0.351 Sum_probs=11.9
Q ss_pred EEEEEeCCeEEEEECC
Q psy14091 42 HVALVRNRRVHTWGSS 57 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~n 57 (694)
|.+...+++||++|-.
T Consensus 26 h~~~~~~~~iyv~GG~ 41 (341)
T PLN02153 26 HGIAVVGDKLYSFGGE 41 (341)
T ss_pred ceEEEECCEEEEECCc
Confidence 4555568899999854
No 38
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=45.44 E-value=1.6e+02 Score=29.55 Aligned_cols=138 Identities=16% Similarity=0.225 Sum_probs=74.1
Q ss_pred CCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEec---CceEEEEEcCCcEEEEeCC-CCCC
Q psy14091 93 GRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAG---QYHSLAITSQGKLYTWGWG-VHGQ 167 (694)
Q Consensus 93 G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G---~~~s~~lt~~G~v~~wG~n-~~gq 167 (694)
+.-|.++...|| ||--++. .|.+|+=+ |+ ..+++.+..| .-|.+++..||..|.+-.. ..+.
T Consensus 62 ~ap~dvapapdG~VWft~qg-~gaiGhLd------P~------tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~aI~R 128 (353)
T COG4257 62 SAPFDVAPAPDGAVWFTAQG-TGAIGHLD------PA------TGEVETYPLGSGASPHGIVVGPDGSAWITDTGLAIGR 128 (353)
T ss_pred CCccccccCCCCceEEecCc-cccceecC------CC------CCceEEEecCCCCCCceEEECCCCCeeEecCcceeEE
Confidence 456788899999 9865543 34444322 11 1124444333 2477788888888877433 1222
Q ss_pred CCCCCCCCCCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCC-CCcccCCCCCCCcccceeeccCCCCeEEEEE
Q psy14091 168 LGLNTVEDMSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSG-IFGQLGTGSNTKHKVPIELYGLPEPISMIAT 246 (694)
Q Consensus 168 lg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n-~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~ 246 (694)
++..+. ..+..+. -.+.+-+.-.+.+++..|.||.-|.+ .+|+|.......+..|.. --
T Consensus 129 ~dpkt~----evt~f~l-----p~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~vfpaP-----------qG 188 (353)
T COG4257 129 LDPKTL----EVTRFPL-----PLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVISVFPAP-----------QG 188 (353)
T ss_pred ecCccc----ceEEeec-----ccccCCCcccceeeCCCccEEEeeccccceecCcccCceeeeccC-----------CC
Confidence 221111 1111111 12233345567889999999999875 455443322222222211 12
Q ss_pred ccCeEEEEecCCcEEEe
Q psy14091 247 GYFHNLALGTSNRLYTW 263 (694)
Q Consensus 247 g~~~~~~l~~~g~v~~w 263 (694)
+.-+.++.+-+|+||.-
T Consensus 189 ~gpyGi~atpdGsvwya 205 (353)
T COG4257 189 GGPYGICATPDGSVWYA 205 (353)
T ss_pred CCCcceEECCCCcEEEE
Confidence 34466888999999975
No 39
>KOG0649|consensus
Probab=43.54 E-value=3.3e+02 Score=26.78 Aligned_cols=39 Identities=10% Similarity=0.133 Sum_probs=27.3
Q ss_pred cccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 228 HKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 228 ~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
..+++.+.+++.++..+..-.+..++..+.+.|-.|-.+
T Consensus 236 sse~t~vfpipa~v~~v~F~~d~vl~~G~g~~v~~~~l~ 274 (325)
T KOG0649|consen 236 SSESTCVFPIPARVHLVDFVDDCVLIGGEGNHVQSYTLN 274 (325)
T ss_pred CCCceEEEecccceeEeeeecceEEEeccccceeeeeec
Confidence 456777778888888887777777776666666666444
No 40
>PF04841 Vps16_N: Vps16, N-terminal region; InterPro: IPR006926 This protein forms part of the Class C vacuolar protein sorting (Vps) complex. Vps16 is essential for vacuolar protein sorting, which is essential for viability in plants, but not yeast []. The Class C Vps complex is required for SNARE-mediated membrane fusion at the lysosome-like yeast vacuole. It is thought to play essential roles in membrane docking and fusion at the Golgi-to-endosome and endosome-to-vacuole stages of transport []. The role of VPS16 in this complex is not known.; GO: 0006886 intracellular protein transport, 0005737 cytoplasm
Probab=41.43 E-value=4.9e+02 Score=28.09 Aligned_cols=69 Identities=19% Similarity=0.200 Sum_probs=37.1
Q ss_pred eEEEEEeC--CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 189 VIISAKGG--HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 189 ~i~~i~~G--~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
++.+|+.. ..+.++++++|.+|..=. +..+.- .-..+.....+.....||.+. +++.-...|...|..
T Consensus 218 ~i~~iavSpng~~iAl~t~~g~l~v~ss-Df~~~~--------~e~~~~~~~~p~~~~WCG~da-v~l~~~~~l~lvg~~ 287 (410)
T PF04841_consen 218 PIIKIAVSPNGKFIALFTDSGNLWVVSS-DFSEKL--------CEFDTDSKSPPKQMAWCGNDA-VVLSWEDELLLVGPD 287 (410)
T ss_pred CeEEEEECCCCCEEEEEECCCCEEEEEC-ccccee--------EEeecCcCCCCcEEEEECCCc-EEEEeCCEEEEECCC
Confidence 46666655 557888899999998632 222110 001110111223445688764 444446678888765
Q ss_pred C
Q psy14091 267 P 267 (694)
Q Consensus 267 ~ 267 (694)
.
T Consensus 288 ~ 288 (410)
T PF04841_consen 288 G 288 (410)
T ss_pred C
Confidence 3
No 41
>PLN02153 epithiospecifier protein
Probab=39.97 E-value=4.5e+02 Score=27.30 Aligned_cols=18 Identities=22% Similarity=0.403 Sum_probs=13.3
Q ss_pred cEEEEEeCCeEEEEECCC
Q psy14091 41 YHVALVRNRRVHTWGSSS 58 (694)
Q Consensus 41 ~~~~l~~~g~v~~wG~n~ 58 (694)
.|.+...+++||++|--.
T Consensus 130 ~~~~~~~~~~iyv~GG~~ 147 (341)
T PLN02153 130 FHSMASDENHVYVFGGVS 147 (341)
T ss_pred eeEEEEECCEEEEECCcc
Confidence 446666789999998643
No 42
>PF07250 Glyoxal_oxid_N: Glyoxal oxidase N-terminus; InterPro: IPR009880 This entry represents the N terminus (approximately 300 residues) of a number of plant and fungal glyoxal oxidase enzymes. Glyoxal oxidase catalyses the oxidation of aldehydes to carboxylic acids, coupled with reduction of dioxygen to hydrogen peroxide. It is an essential component of the extracellular lignin degradation pathways of the wood-rot fungus Phanerochaete chrysosporium [].
Probab=38.74 E-value=4e+02 Score=26.37 Aligned_cols=74 Identities=12% Similarity=0.148 Sum_probs=37.5
Q ss_pred EEec-CceEEEEEcCCcEEEEeCCCCCCCCCCCC-CCCCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCC
Q psy14091 141 ISAG-QYHSLAITSQGKLYTWGWGVHGQLGLNTV-EDMSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSG 215 (694)
Q Consensus 141 i~~G-~~~s~~lt~~G~v~~wG~n~~gqlg~~~~-~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n 215 (694)
++.+ ++.+..+..||+|++.|-....-...-.. .....+..+..+... -.......+=.+.|..+|+||.|+.+
T Consensus 114 m~~~RWYpT~~~L~DG~vlIvGG~~~~t~E~~P~~~~~~~~~~~~~l~~~-~~~~~~nlYP~~~llPdG~lFi~an~ 189 (243)
T PF07250_consen 114 MQSGRWYPTATTLPDGRVLIVGGSNNPTYEFWPPKGPGPGPVTLPFLSQT-SDTLPNNLYPFVHLLPDGNLFIFANR 189 (243)
T ss_pred ccCCCccccceECCCCCEEEEeCcCCCcccccCCccCCCCceeeecchhh-hccCccccCceEEEcCCCCEEEEEcC
Confidence 4444 56788889999999998443110000000 001111222222110 00122234446777889999999875
No 43
>KOG1900|consensus
Probab=38.59 E-value=3.4e+02 Score=33.34 Aligned_cols=102 Identities=15% Similarity=0.116 Sum_probs=54.4
Q ss_pred EEEEcCCcEEEEeCCCCCCCCCCCCCCCC--CCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCC-cccCCCCC
Q psy14091 149 LAITSQGKLYTWGWGVHGQLGLNTVEDMS--EPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIF-GQLGTGSN 225 (694)
Q Consensus 149 ~~lt~~G~v~~wG~n~~gqlg~~~~~~~~--~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~-gqlg~~~~ 225 (694)
+-+|.|+++|.|-.+..+++-.-+..... .-..++.-.+.-+-.| .|.++|...=+|+..|--.. ...+....
T Consensus 93 aWiTiDn~L~lWny~~~~e~~~~d~~shtIl~V~LvkPkpgvFv~~I----qhlLvvaT~~ei~ilgV~~~~~~~~~~~f 168 (1311)
T KOG1900|consen 93 AWITIDNNLFLWNYESDNELAEYDGLSHTILKVGLVKPKPGVFVPEI----QHLLVVATPVEIVILGVSFDEFTGELSIF 168 (1311)
T ss_pred eEEEeCCeEEEEEcCCCCccccccchhhhheeeeeecCCCCcchhhh----heeEEecccceEEEEEEEeccccCccccc
Confidence 57899999999998886666443322111 1111111112112222 58899988888988874311 11111110
Q ss_pred CCcccceeeccCCCCeEEEEE-ccCeEEEE-ecCCcEEEecCCC
Q psy14091 226 TKHKVPIELYGLPEPISMIAT-GYFHNLAL-GTSNRLYTWGSSP 267 (694)
Q Consensus 226 ~~~~~p~~~~~~~~~i~~i~~-g~~~~~~l-~~~g~v~~wG~~~ 267 (694)
. ..-+|+. |.+-.++. +++|+||.-|.+.
T Consensus 169 ~-------------~~~~i~~dg~~V~~I~~t~nGRIF~~G~dg 199 (1311)
T KOG1900|consen 169 N-------------TSFKISVDGVSVNCITYTENGRIFFAGRDG 199 (1311)
T ss_pred c-------------cceeeecCCceEEEEEeccCCcEEEeecCC
Confidence 0 0123333 44444554 7888888888764
No 44
>TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL. Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ.
Probab=37.49 E-value=5.1e+02 Score=27.22 Aligned_cols=132 Identities=11% Similarity=-0.031 Sum_probs=0.0
Q ss_pred CCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCC
Q psy14091 94 RLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNT 172 (694)
Q Consensus 94 ~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~ 172 (694)
....++.+.+| +|++-....-++-.........|.. -..+.++.+.+|.|+++ +
T Consensus 241 ~~~vy~~~~~g~l~a~d~~tG~~~W~~~~~~~~~p~~--------------~~~~vyv~~~~G~l~~~-----------d 295 (377)
T TIGR03300 241 GGQVYAVSYQGRVAALDLRSGRVLWKRDASSYQGPAV--------------DDNRLYVTDADGVVVAL-----------D 295 (377)
T ss_pred CCEEEEEEcCCEEEEEECCCCcEEEeeccCCccCceE--------------eCCEEEEECCCCeEEEE-----------E
Q ss_pred CCCCCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCC---cccceeeccCCCCeEEEEEccC
Q psy14091 173 VEDMSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTK---HKVPIELYGLPEPISMIATGYF 249 (694)
Q Consensus 173 ~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~---~~~p~~~~~~~~~i~~i~~g~~ 249 (694)
...-...-..+.+..........-..+.++.+.+|.||++-..+--.+..-.... ...|... ..
T Consensus 296 ~~tG~~~W~~~~~~~~~~ssp~i~g~~l~~~~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~-------------~~ 362 (377)
T TIGR03300 296 RRSGSELWKNDELKYRQLTAPAVVGGYLVVGDFEGYLHWLSREDGSFVARLKTDGSGIASPPVVV-------------GD 362 (377)
T ss_pred CCCCcEEEccccccCCccccCEEECCEEEEEeCCCEEEEEECCCCCEEEEEEcCCCccccCCEEE-------------CC
Q ss_pred eEEEEecCCcEEEe
Q psy14091 250 HNLALGTSNRLYTW 263 (694)
Q Consensus 250 ~~~~l~~~g~v~~w 263 (694)
..++.+.+|+||++
T Consensus 363 ~l~v~~~dG~l~~~ 376 (377)
T TIGR03300 363 GLLVQTRDGDLYAF 376 (377)
T ss_pred EEEEEeCCceEEEe
No 45
>PF12341 DUF3639: Protein of unknown function (DUF3639) ; InterPro: IPR022100 This domain family is found in eukaryotes, and is approximately 30 amino acids in length. The family is found in association with PF00400 from PFAM. There are two completely conserved residues (E and R) that may be functionally important.
Probab=36.00 E-value=99 Score=18.96 Aligned_cols=25 Identities=28% Similarity=0.316 Sum_probs=20.8
Q ss_pred CcEEEEEecCceEEEEEcCCcEEEE
Q psy14091 136 IRVVSISAGQYHSLAITSQGKLYTW 160 (694)
Q Consensus 136 ~~i~~i~~G~~~s~~lt~~G~v~~w 160 (694)
+.|..|++|....++.|+.+-|-.|
T Consensus 2 E~i~aia~g~~~vavaTS~~~lRif 26 (27)
T PF12341_consen 2 EEIEAIAAGDSWVAVATSAGYLRIF 26 (27)
T ss_pred ceEEEEEccCCEEEEEeCCCeEEec
Confidence 4689999999999999998876543
No 46
>cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto
Probab=34.79 E-value=4.1e+02 Score=25.36 Aligned_cols=107 Identities=13% Similarity=0.078 Sum_probs=48.7
Q ss_pred cEEEEEecCc-eEEEEEc-CCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCC-cEEEEEEc-CCeEEEE
Q psy14091 137 RVVSISAGQY-HSLAITS-QGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGH-AHSIALTK-AGRVWAF 212 (694)
Q Consensus 137 ~i~~i~~G~~-~s~~lt~-~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~-~~~~~lt~-~G~v~~w 212 (694)
.|..+..... ..++... +|.|+.|-...... ...+. .....+..++... ...++... +|.|+.|
T Consensus 95 ~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~-----------~~~~~-~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~ 162 (289)
T cd00200 95 YVSSVAFSPDGRILSSSSRDKTIKVWDVETGKC-----------LTTLR-GHTDWVNSVAFSPDGTFVASSSQDGTIKLW 162 (289)
T ss_pred cEEEEEEcCCCCEEEEecCCCeEEEEECCCcEE-----------EEEec-cCCCcEEEEEEcCcCCEEEEEcCCCcEEEE
Confidence 3555555443 3344444 88999886432111 01111 1112355554444 22333333 8888888
Q ss_pred eCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccC--eEEEEecCCcEEEecCC
Q psy14091 213 GSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYF--HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 213 G~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~--~~~~l~~~g~v~~wG~~ 266 (694)
-...... ...+......+..+....+ ..++...+|.++.|-..
T Consensus 163 d~~~~~~-----------~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~ 207 (289)
T cd00200 163 DLRTGKC-----------VATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLS 207 (289)
T ss_pred Ecccccc-----------ceeEecCccccceEEECCCcCEEEEecCCCcEEEEECC
Confidence 5431100 0011111124555554443 44445557788887543
No 47
>KOG0282|consensus
Probab=34.75 E-value=1.4e+02 Score=32.11 Aligned_cols=24 Identities=13% Similarity=0.253 Sum_probs=16.9
Q ss_pred CeEEeeecCcEEEEEeCCeEEEEE
Q psy14091 32 PEVPLSGGFYHVALVRNRRVHTWG 55 (694)
Q Consensus 32 ~i~~v~~G~~~~~l~~~g~v~~wG 55 (694)
.|+.+.-|..|+--..++.|.+|=
T Consensus 347 ~i~F~~~g~rFissSDdks~riWe 370 (503)
T KOG0282|consen 347 DITFVDEGRRFISSSDDKSVRIWE 370 (503)
T ss_pred eeEEccCCceEeeeccCccEEEEE
Confidence 356666677776667788888884
No 48
>KOG0646|consensus
Probab=33.78 E-value=6.4e+02 Score=27.23 Aligned_cols=97 Identities=15% Similarity=0.284 Sum_probs=50.6
Q ss_pred eCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCe--EEEE--eCCC-eEEEeCCCCCccCCCCC
Q psy14091 47 RNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLH--TLVL--TSSG-VYAWGSSQYGQLGIGLI 121 (694)
Q Consensus 47 ~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h--~~~l--~~~G-vy~wG~n~~gqLG~~~~ 121 (694)
+||.|++|=--.. ....+...|.++-.+......|+++.+|..- +.++ ..|. +-.|--. .|.|
T Consensus 143 kDg~V~vW~l~~l------v~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS-~g~L----- 210 (476)
T KOG0646|consen 143 KDGAVLVWLLTDL------VSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRTIKLWDLS-LGVL----- 210 (476)
T ss_pred CCccEEEEEEEee------cccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCceEEEEEec-ccee-----
Confidence 5788888854321 1112223677777788888899999888763 2222 2233 4344321 1111
Q ss_pred CCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEE
Q psy14091 122 DQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTW 160 (694)
Q Consensus 122 ~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~w 160 (694)
-..+.+....+.+.+.-+..+.++=+++|.+|..
T Consensus 211 -----Llti~fp~si~av~lDpae~~~yiGt~~G~I~~~ 244 (476)
T KOG0646|consen 211 -----LLTITFPSSIKAVALDPAERVVYIGTEEGKIFQN 244 (476)
T ss_pred -----eEEEecCCcceeEEEcccccEEEecCCcceEEee
Confidence 1111112222233444556666777788888754
No 49
>COG4257 Vgb Streptogramin lyase [Defense mechanisms]
Probab=33.00 E-value=2.6e+02 Score=28.07 Aligned_cols=136 Identities=21% Similarity=0.229 Sum_probs=72.1
Q ss_pred CcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCC---CeEEEEeCCC-eEEEeCCC-C
Q psy14091 40 FYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGR---LHTLVLTSSG-VYAWGSSQ-Y 113 (694)
Q Consensus 40 ~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~---~h~~~l~~~G-vy~wG~n~-~ 113 (694)
.-| ++...||.||.=+.. .|.+|+-+ |. .-+++.+..|. -|.+++..|| .|.+-... -
T Consensus 63 ap~dvapapdG~VWft~qg-~gaiGhLd-------P~--------tGev~~ypLg~Ga~Phgiv~gpdg~~Witd~~~aI 126 (353)
T COG4257 63 APFDVAPAPDGAVWFTAQG-TGAIGHLD-------PA--------TGEVETYPLGSGASPHGIVVGPDGSAWITDTGLAI 126 (353)
T ss_pred CccccccCCCCceEEecCc-cccceecC-------CC--------CCceEEEecCCCCCCceEEECCCCCeeEecCccee
Confidence 345 888899999975543 33333322 11 12455555444 5788888888 87764331 1
Q ss_pred CccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCC-CCCCCCCCCCCCCCCCEEecccCCceEEE
Q psy14091 114 GQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWG-VHGQLGLNTVEDMSEPQLVKALEHEVIIS 192 (694)
Q Consensus 114 gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n-~~gqlg~~~~~~~~~p~~v~~~~~~~i~~ 192 (694)
+.++... ...++.+. -.+.+-+.-.+.+++..|.||.-|.+ .+|.|--....-. .....
T Consensus 127 ~R~dpkt----~evt~f~l-----p~~~a~~nlet~vfD~~G~lWFt~q~G~yGrLdPa~~~i~----vfpaP------- 186 (353)
T COG4257 127 GRLDPKT----LEVTRFPL-----PLEHADANLETAVFDPWGNLWFTGQIGAYGRLDPARNVIS----VFPAP------- 186 (353)
T ss_pred EEecCcc----cceEEeec-----ccccCCCcccceeeCCCccEEEeeccccceecCcccCcee----eeccC-------
Confidence 2222111 11111111 12234455677899999999999863 3443321111000 00111
Q ss_pred EEeCCcEEEEEEcCCeEEEE
Q psy14091 193 AKGGHAHSIALTKAGRVWAF 212 (694)
Q Consensus 193 i~~G~~~~~~lt~~G~v~~w 212 (694)
.-+.-..++.|-||+||.-
T Consensus 187 -qG~gpyGi~atpdGsvwya 205 (353)
T COG4257 187 -QGGGPYGICATPDGSVWYA 205 (353)
T ss_pred -CCCCCcceEECCCCcEEEE
Confidence 1234466788999999976
No 50
>PF06739 SBBP: Beta-propeller repeat; InterPro: IPR010620 This family is related to IPR001680 from INTERPRO and is likely to also form a beta-propeller. SBBP stands for Seven Bladed Beta Propeller.
Probab=32.19 E-value=47 Score=22.07 Aligned_cols=17 Identities=24% Similarity=0.517 Sum_probs=15.1
Q ss_pred eeEEEccCCcEEEEcCC
Q psy14091 439 FSLAMDESGKVWAWGTN 455 (694)
Q Consensus 439 ht~alt~~G~vy~wG~n 455 (694)
+.++++.+|.||.-|.-
T Consensus 16 ~~IavD~~GNiYv~G~T 32 (38)
T PF06739_consen 16 NGIAVDSNGNIYVTGYT 32 (38)
T ss_pred EEEEECCCCCEEEEEee
Confidence 67999999999999964
No 51
>PF03785 Peptidase_C25_C: Peptidase family C25, C terminal ig-like domain; InterPro: IPR005536 This domain is found in almost all members of MEROPS peptidase family C25, (clan CD). Peptidase family C25 is a protein family found in the bacteria Porphyromonas gingivalis (Bacteroides gingivalis) a Gram-negative anaerobic bacterial species strongly associated with adult periodontitis. One of its distinguishing characteristics and putative virulence properties is the ability to agglutinate erythrocytes []. It is a highly proteolytic organism which metabolises small peptides and amino acids. Indirect evidence suggests that the proteases produced by this microorganism constitute an important virulence factor []. Protease-encoding genes have been shown to contain multiple copies of repeated nucleotide sequences. These conserved sequences have also been found in haemagglutinin genes [].; GO: 0008233 peptidase activity, 0006508 proteolysis; PDB: 1CVR_A.
Probab=30.30 E-value=63 Score=25.59 Aligned_cols=32 Identities=22% Similarity=0.280 Sum_probs=25.4
Q ss_pred eEEEEecC-CCceEEEecCCcEEEEeCCCCCCC
Q psy14091 638 RVVSISAG-QYHSLAITSQGKLYTWGWGVHGQL 669 (694)
Q Consensus 638 ~v~~is~G-~~h~~al~~dG~v~~WG~n~~GqL 669 (694)
.-.+|+|. ....++|+.||.||+-|--..|++
T Consensus 17 tS~~Vs~~~~gs~ValS~dg~l~G~ai~~sG~a 49 (81)
T PF03785_consen 17 TSISVSCDVPGSYVALSQDGDLYGKAIVNSGNA 49 (81)
T ss_dssp SEEEEEESSTT-EEEEEETTEEEEEEE-BTTEE
T ss_pred cEEEEEecCCCcEEEEecCCEEEEEEEecCceE
Confidence 46889999 889999999999999997656554
No 52
>PHA02713 hypothetical protein; Provisional
Probab=30.15 E-value=6.3e+02 Score=28.52 Aligned_cols=15 Identities=13% Similarity=0.140 Sum_probs=11.8
Q ss_pred EEEEeCCeEEEEECC
Q psy14091 43 VALVRNRRVHTWGSS 57 (694)
Q Consensus 43 ~~l~~~g~v~~wG~n 57 (694)
.+..-+|+||++|-.
T Consensus 346 ~~~~~~g~IYviGG~ 360 (557)
T PHA02713 346 SLAVIDDTIYAIGGQ 360 (557)
T ss_pred eEEEECCEEEEECCc
Confidence 556668999999964
No 53
>PHA03098 kelch-like protein; Provisional
Probab=30.14 E-value=8.1e+02 Score=27.31 Aligned_cols=17 Identities=24% Similarity=0.116 Sum_probs=12.1
Q ss_pred EEEEEeCCeEEEEECCC
Q psy14091 42 HVALVRNRRVHTWGSSS 58 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~n~ 58 (694)
|.+...+|+||++|-..
T Consensus 336 ~~~~~~~~~lyv~GG~~ 352 (534)
T PHA03098 336 PGVTVFNNRIYVIGGIY 352 (534)
T ss_pred ceEEEECCEEEEEeCCC
Confidence 34555689999999643
No 54
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=28.30 E-value=1.1e+03 Score=28.49 Aligned_cols=28 Identities=4% Similarity=-0.083 Sum_probs=21.3
Q ss_pred CCeEEEEecCceeEEEeCCccEEEEeCC
Q psy14091 360 APILQICCGCHHSMLLSREGRVYTWGRN 387 (694)
Q Consensus 360 ~~i~~I~~G~~h~~aLt~~G~vy~wG~n 387 (694)
..++++.....|.+..|.+..+.+.=-+
T Consensus 612 ~~~tSF~v~~~~Ll~TT~~h~l~fv~L~ 639 (928)
T PF04762_consen 612 SNCTSFAVTDSFLLFTTTQHTLKFVHLN 639 (928)
T ss_pred cCCceEEEEcCEEEEEecCceEEEEECc
Confidence 3688888889998888887777776543
No 55
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=26.36 E-value=4.4e+02 Score=27.93 Aligned_cols=114 Identities=17% Similarity=0.321 Sum_probs=55.6
Q ss_pred cEEEEEeCCC-eE-EEEeCCC--eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCc-eEEEEEcCCcEEEE
Q psy14091 86 DVSSVACGRL-HT-LVLTSSG--VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQY-HSLAITSQGKLYTW 160 (694)
Q Consensus 86 ~i~~v~~G~~-h~-~~l~~~G--vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~-~s~~lt~~G~v~~w 160 (694)
.+..|..|.. |. ++.+.|| +|..+. .|.+ ..+.......+..|..|.. +.++++.||+...-
T Consensus 28 ~~~~i~~~~~~h~~~~~s~Dgr~~yv~~r--dg~v-----------sviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~v 94 (369)
T PF02239_consen 28 VVARIPTGGAPHAGLKFSPDGRYLYVANR--DGTV-----------SVIDLATGKVVATIKVGGNPRGIAVSPDGKYVYV 94 (369)
T ss_dssp EEEEEE-STTEEEEEE-TT-SSEEEEEET--TSEE-----------EEEETTSSSEEEEEE-SSEEEEEEE--TTTEEEE
T ss_pred EEEEEcCCCCceeEEEecCCCCEEEEEcC--CCeE-----------EEEECCcccEEEEEecCCCcceEEEcCCCCEEEE
Confidence 3566666554 55 5578888 898864 3432 3444445556778887764 56888999986655
Q ss_pred eCCCCCCCCCCCCCCCCCCEEecc--c----CCceEEEEEeC---CcEEEEEEcCCeEEEE
Q psy14091 161 GWGVHGQLGLNTVEDMSEPQLVKA--L----EHEVIISAKGG---HAHSIALTKAGRVWAF 212 (694)
Q Consensus 161 G~n~~gqlg~~~~~~~~~p~~v~~--~----~~~~i~~i~~G---~~~~~~lt~~G~v~~w 212 (694)
++...+++-.-+......-+.++. . ...++..|... ..+.+.+.+.|++|.-
T Consensus 95 ~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vV 155 (369)
T PF02239_consen 95 ANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVV 155 (369)
T ss_dssp EEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEE
T ss_pred EecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEE
Confidence 543344443322222111111211 0 12244455432 2255666777888876
No 56
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=26.13 E-value=8e+02 Score=25.92 Aligned_cols=16 Identities=31% Similarity=0.387 Sum_probs=11.9
Q ss_pred EEEEE-eCCeEEEEECC
Q psy14091 42 HVALV-RNRRVHTWGSS 57 (694)
Q Consensus 42 ~~~l~-~~g~v~~wG~n 57 (694)
|.++. .+++||++|-.
T Consensus 132 ~~~~~~~~~~IYv~GG~ 148 (376)
T PRK14131 132 HVAVSLHNGKAYITGGV 148 (376)
T ss_pred eEEEEeeCCEEEEECCC
Confidence 44444 79999999974
No 57
>KOG4441|consensus
Probab=26.06 E-value=1e+03 Score=27.06 Aligned_cols=22 Identities=14% Similarity=0.228 Sum_probs=15.1
Q ss_pred EEecCceeEEEeCCccEEEEeC
Q psy14091 365 ICCGCHHSMLLSREGRVYTWGR 386 (694)
Q Consensus 365 I~~G~~h~~aLt~~G~vy~wG~ 386 (694)
+.....+.-+..-++++|+-|-
T Consensus 509 m~~~rs~~g~~~~~~~ly~vGG 530 (571)
T KOG4441|consen 509 MTSPRSAVGVVVLGGKLYAVGG 530 (571)
T ss_pred CccccccccEEEECCEEEEEec
Confidence 4445555555666889999986
No 58
>PHA02790 Kelch-like protein; Provisional
Probab=25.18 E-value=4.7e+02 Score=28.88 Aligned_cols=15 Identities=13% Similarity=0.171 Sum_probs=11.3
Q ss_pred EEEEeCCeEEEEECC
Q psy14091 43 VALVRNRRVHTWGSS 57 (694)
Q Consensus 43 ~~l~~~g~v~~wG~n 57 (694)
.+..-+|+||+.|-.
T Consensus 313 ~~v~~~~~iYviGG~ 327 (480)
T PHA02790 313 SGVPANNKLYVVGGL 327 (480)
T ss_pred eEEEECCEEEEECCc
Confidence 445578999999953
No 59
>KOG1240|consensus
Probab=24.86 E-value=1.4e+03 Score=28.34 Aligned_cols=120 Identities=16% Similarity=0.225 Sum_probs=60.4
Q ss_pred cEEEEEecCce-EEEEE--cCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEE-EeCCcEEEEE-EcCCeEEE
Q psy14091 137 RVVSISAGQYH-SLAIT--SQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISA-KGGHAHSIAL-TKAGRVWA 211 (694)
Q Consensus 137 ~i~~i~~G~~~-s~~lt--~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i-~~G~~~~~~l-t~~G~v~~ 211 (694)
.+.+++....| +++++ .||.|-.|-.-. -.|.+. ..+..-+. ...+.++.++ .|+..+.+|+ ++||.|-.
T Consensus 1050 ~v~k~a~s~~~~s~FvsgS~DGtVKvW~~~k--~~~~~~-s~rS~lty--s~~~sr~~~vt~~~~~~~~Av~t~DG~v~~ 1124 (1431)
T KOG1240|consen 1050 AVIKLAVSSEHTSLFVSGSDDGTVKVWNLRK--LEGEGG-SARSELTY--SPEGSRVEKVTMCGNGDQFAVSTKDGSVRV 1124 (1431)
T ss_pred cccceeecCCCCceEEEecCCceEEEeeehh--hhcCcc-eeeeeEEE--eccCCceEEEEeccCCCeEEEEcCCCeEEE
Confidence 35678888888 77775 689999996432 222211 11111111 1133344444 3455555444 68999988
Q ss_pred EeCCCCcccCCCCCCCcccceeeccC--CCCeEEEEEc----cC-eEEEEecCCcEEEecCC
Q psy14091 212 FGSGIFGQLGTGSNTKHKVPIELYGL--PEPISMIATG----YF-HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 212 wG~n~~gqlg~~~~~~~~~p~~~~~~--~~~i~~i~~g----~~-~~~~l~~~g~v~~wG~~ 266 (694)
.+-+.+.+ ......-.++..+ ...++++-+- .. -.++.+..+.+..|+..
T Consensus 1125 ~~id~~~~-----~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r 1181 (1431)
T KOG1240|consen 1125 LRIDHYNV-----SKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTR 1181 (1431)
T ss_pred EEcccccc-----ccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecch
Confidence 87654311 1111111111111 1234443222 12 34566888899999865
No 60
>KOG0315|consensus
Probab=24.73 E-value=7e+02 Score=24.77 Aligned_cols=59 Identities=17% Similarity=0.223 Sum_probs=36.1
Q ss_pred cEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccC--eEEEEecCCcEEEecCC
Q psy14091 198 AHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYF--HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 198 ~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~--~~~~l~~~g~v~~wG~~ 266 (694)
.+-+.-+++|.|++|-.. .........|.. ...|.+++...+ ...+.++.|+.|+|-.-
T Consensus 137 teLis~dqsg~irvWDl~------~~~c~~~liPe~----~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~ 197 (311)
T KOG0315|consen 137 TELISGDQSGNIRVWDLG------ENSCTHELIPED----DTSIQSLTVMPDGSMLAAANNKGNCYVWRLL 197 (311)
T ss_pred ceEEeecCCCcEEEEEcc------CCccccccCCCC----CcceeeEEEcCCCcEEEEecCCccEEEEEcc
Confidence 344555789999999543 222222333322 235666666654 45667899999999764
No 61
>PRK14131 N-acetylneuraminic acid mutarotase; Provisional
Probab=24.38 E-value=8.6e+02 Score=25.68 Aligned_cols=17 Identities=12% Similarity=0.186 Sum_probs=12.5
Q ss_pred eEEEEecCCcEEEecCC
Q psy14091 250 HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 250 ~~~~l~~~g~v~~wG~~ 266 (694)
+..++.-+++||+.|-.
T Consensus 336 ~~~av~~~~~iyv~GG~ 352 (376)
T PRK14131 336 YGVSVSWNNGVLLIGGE 352 (376)
T ss_pred ceEEEEeCCEEEEEcCC
Confidence 34466777999999864
No 62
>KOG4441|consensus
Probab=24.14 E-value=1.1e+03 Score=26.79 Aligned_cols=58 Identities=12% Similarity=0.092 Sum_probs=31.8
Q ss_pred EEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCC---eEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 202 ALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEP---ISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 202 ~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~---i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
+..-++.||+.|-.+. +..... .....| ..++ +..+.....+.-+..-++++|+-|-.
T Consensus 471 ~a~~~~~iYvvGG~~~-~~~~~~-VE~ydp-----~~~~W~~v~~m~~~rs~~g~~~~~~~ly~vGG~ 531 (571)
T KOG4441|consen 471 VAVLNGKIYVVGGFDG-TSALSS-VERYDP-----ETNQWTMVAPMTSPRSAVGVVVLGGKLYAVGGF 531 (571)
T ss_pred EEEECCEEEEECCccC-CCccce-EEEEcC-----CCCceeEcccCccccccccEEEECCEEEEEecc
Confidence 4445899999986533 111100 001111 1122 23344566777777889999998864
No 63
>PF13418 Kelch_4: Galactose oxidase, central domain; PDB: 2UVK_B.
Probab=23.67 E-value=74 Score=22.04 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=12.0
Q ss_pred CCceEEEecCCcEEEEeC
Q psy14091 646 QYHSLAITSQGKLYTWGW 663 (694)
Q Consensus 646 ~~h~~al~~dG~v~~WG~ 663 (694)
..|+++...+++||++|=
T Consensus 3 ~~h~~~~~~~~~i~v~GG 20 (49)
T PF13418_consen 3 YGHSAVSIGDNSIYVFGG 20 (49)
T ss_dssp BS-EEEEE-TTEEEEE--
T ss_pred ceEEEEEEeCCeEEEECC
Confidence 368888888899999984
No 64
>PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A ....
Probab=23.30 E-value=9e+02 Score=25.57 Aligned_cols=116 Identities=16% Similarity=0.220 Sum_probs=55.6
Q ss_pred CcEEEEEecCc-eE-EEEEcCCc-EEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCCc-EEEEEEcCCeEEE
Q psy14091 136 IRVVSISAGQY-HS-LAITSQGK-LYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGHA-HSIALTKAGRVWA 211 (694)
Q Consensus 136 ~~i~~i~~G~~-~s-~~lt~~G~-v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~-~~~~lt~~G~v~~ 211 (694)
..+..|..|.. |. ++.+.||+ +|+.+. .|. -..+...+...+..|..|.. +.++++.||+...
T Consensus 27 ~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~r--dg~-----------vsviD~~~~~~v~~i~~G~~~~~i~~s~DG~~~~ 93 (369)
T PF02239_consen 27 KVVARIPTGGAPHAGLKFSPDGRYLYVANR--DGT-----------VSVIDLATGKVVATIKVGGNPRGIAVSPDGKYVY 93 (369)
T ss_dssp SEEEEEE-STTEEEEEE-TT-SSEEEEEET--TSE-----------EEEEETTSSSEEEEEE-SSEEEEEEE--TTTEEE
T ss_pred eEEEEEcCCCCceeEEEecCCCCEEEEEcC--CCe-----------EEEEECCcccEEEEEecCCCcceEEEcCCCCEEE
Confidence 34667777654 54 45677776 777652 232 23455555566778877765 6788889998655
Q ss_pred EeCCCCcccCCCCCCC----cccceeecc---CCCCeEEEEEccC---eEEEEecCCcEEEec
Q psy14091 212 FGSGIFGQLGTGSNTK----HKVPIELYG---LPEPISMIATGYF---HNLALGTSNRLYTWG 264 (694)
Q Consensus 212 wG~n~~gqlg~~~~~~----~~~p~~~~~---~~~~i~~i~~g~~---~~~~l~~~g~v~~wG 264 (694)
-+....+++-.-+... ...|..-.. ...++..|.+... +.+.+.+.+++|.--
T Consensus 94 v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVd 156 (369)
T PF02239_consen 94 VANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVD 156 (369)
T ss_dssp EEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEE
T ss_pred EEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEE
Confidence 4443333333211111 111111000 1235556654332 556677888888754
No 65
>PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs. It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells [].
Probab=23.24 E-value=1.2e+03 Score=27.18 Aligned_cols=119 Identities=14% Similarity=0.174 Sum_probs=59.3
Q ss_pred EEEEeCCeEEEEECCCCCccCCC----CCC--Cc-cCCCeeeeeecCCCCcEEEEEeCC--CeEEEEeCCC---eEE---
Q psy14091 43 VALVRNRRVHTWGSSSYGALGNG----PTM--SQ-ISEPEPVVWFRNNKIDVSSVACGR--LHTLVLTSSG---VYA--- 107 (694)
Q Consensus 43 ~~l~~~g~v~~wG~n~~GqLG~g----~~~--~~-~~~p~~i~~~~~~~~~i~~v~~G~--~h~~~l~~~G---vy~--- 107 (694)
++...|+.||+|=.+....+-.. ... .. ......+.........|.+|.... .|.++.-..| ++.
T Consensus 36 Ll~~~d~~L~vWd~~e~~l~~~nlr~~~~~~~~~~~~~~q~L~~~~~~~f~v~~i~~n~~g~~lal~G~~~v~V~~LP~r 115 (717)
T PF10168_consen 36 LLACRDGDLFVWDSSECCLLTVNLRSLESDAEGPAKSSYQKLLPSNPPLFEVHQISLNPTGSLLALVGPRGVVVLELPRR 115 (717)
T ss_pred eEEEeCCEEEEEECCCCEEEEEeeccccccccCccccCcceeecCCCCceeEEEEEECCCCCEEEEEcCCcEEEEEeccc
Confidence 45555899999988776544321 000 00 001111111112234677777655 3444445556 222
Q ss_pred EeCCCCCccCCCCCCCCCccEEcCCC---CCCcEEEEE-----ecCceEEEEEcCCcEEEEe
Q psy14091 108 WGSSQYGQLGIGLIDQSPHPRIIPAL---ANIRVVSIS-----AGQYHSLAITSQGKLYTWG 161 (694)
Q Consensus 108 wG~n~~gqLG~~~~~~~~~p~~v~~~---~~~~i~~i~-----~G~~~s~~lt~~G~v~~wG 161 (694)
||.+.+-+.|.....-+..|.--..+ ....|+++. ..+.|-++||+|+.+..+-
T Consensus 116 ~g~~~~~~~g~~~i~Crt~~v~~~~~~~~~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~ 177 (717)
T PF10168_consen 116 WGKNGEFEDGKKEINCRTVPVDERFFTSNSSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYD 177 (717)
T ss_pred cCccccccCCCcceeEEEEEechhhccCCCCceEEEEEEcCCCCCCCeEEEEecCCEEEEEe
Confidence 67654433333222212222111111 234577764 4478999999999987764
No 66
>TIGR03548 mutarot_permut cyclically-permuted mutatrotase family protein. Members of this protein family show essentially full-length homology, cyclically permuted, to YjhT from Escherichia coli. YjhT was shown to act as a mutarotase for sialic acid, and by this ability to be able to act as a virulence factor. Members of the YjhT family (TIGR03547) and this cyclically-permuted family have multiple repeats of the beta-propeller-forming Kelch repeat.
Probab=22.55 E-value=7.8e+02 Score=25.20 Aligned_cols=102 Identities=10% Similarity=0.042 Sum_probs=0.0
Q ss_pred CcEEEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEE----eCCCeEEEEeCCC-eEEEeCCCCC
Q psy14091 40 FYHVALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVA----CGRLHTLVLTSSG-VYAWGSSQYG 114 (694)
Q Consensus 40 ~~~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~----~G~~h~~~l~~~G-vy~wG~n~~g 114 (694)
..|.+...+++||++|-...+. ....+..+........++. ....+..+..-++ +|.+|
T Consensus 115 ~~~~~~~~~~~iYv~GG~~~~~-----------~~~~v~~yd~~~~~W~~~~~~p~~~r~~~~~~~~~~~iYv~G----- 178 (323)
T TIGR03548 115 ENGSACYKDGTLYVGGGNRNGK-----------PSNKSYLFNLETQEWFELPDFPGEPRVQPVCVKLQNELYVFG----- 178 (323)
T ss_pred cCceEEEECCEEEEEeCcCCCc-----------cCceEEEEcCCCCCeeECCCCCCCCCCcceEEEECCEEEEEc-----
Q ss_pred ccCCCCCCCCCccEEcCCCCCCcEEEEEe---------cCceEEEEEcCCcEEEEe
Q psy14091 115 QLGIGLIDQSPHPRIIPALANIRVVSISA---------GQYHSLAITSQGKLYTWG 161 (694)
Q Consensus 115 qLG~~~~~~~~~p~~v~~~~~~~i~~i~~---------G~~~s~~lt~~G~v~~wG 161 (694)
|.......-..+-.+...+...++. -..++.+.-.++++|+.|
T Consensus 179 ----G~~~~~~~~~~~yd~~~~~W~~~~~~~~~~~p~~~~~~~~~~~~~~~iyv~G 230 (323)
T TIGR03548 179 ----GGSNIAYTDGYKYSPKKNQWQKVADPTTDSEPISLLGAASIKINESLLLCIG 230 (323)
T ss_pred ----CCCCccccceEEEecCCCeeEECCCCCCCCCceeccceeEEEECCCEEEEEC
No 67
>PLN02772 guanylate kinase
Probab=22.12 E-value=2.1e+02 Score=30.48 Aligned_cols=64 Identities=14% Similarity=0.144 Sum_probs=41.6
Q ss_pred cCCcEEEEEECCCEEEee-cCCCCcCCCC------CCCCCCCceeecccCCceEEEEecCCCceEEEecCCcEEEEeC
Q psy14091 593 CGRLHTLVLTSSGVYAWG-SSQYGQLGIG------LIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGW 663 (694)
Q Consensus 593 ~G~~h~~~l~~~gv~~wG-~n~~GqLG~g------~~~~~~~P~~v~~l~~~~v~~is~G~~h~~al~~dG~v~~WG~ 663 (694)
....|+++.-.+.+|.|| +|..+.+-+. .+.....|...-..+. +-+.|++++..+.++++.+-
T Consensus 24 ~~~~~tav~igdk~yv~GG~~d~~~~~~~v~i~D~~t~~W~~P~V~G~~P~-------~r~GhSa~v~~~~rilv~~~ 94 (398)
T PLN02772 24 PKNRETSVTIGDKTYVIGGNHEGNTLSIGVQILDKITNNWVSPIVLGTGPK-------PCKGYSAVVLNKDRILVIKK 94 (398)
T ss_pred CCCcceeEEECCEEEEEcccCCCccccceEEEEECCCCcEecccccCCCCC-------CCCcceEEEECCceEEEEeC
Confidence 455678887777799999 4454435443 2234455655533332 33479999999999999874
No 68
>PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [].
Probab=22.10 E-value=1.5e+03 Score=27.59 Aligned_cols=27 Identities=22% Similarity=0.379 Sum_probs=22.3
Q ss_pred CcEEEEEecCce--EEEEEcCCcEEEEeC
Q psy14091 136 IRVVSISAGQYH--SLAITSQGKLYTWGW 162 (694)
Q Consensus 136 ~~i~~i~~G~~~--s~~lt~~G~v~~wG~ 162 (694)
..|.+|+....+ .++++.+|++..|-.
T Consensus 427 ~~v~~vaf~~~~~~~avl~~d~~l~~~~~ 455 (928)
T PF04762_consen 427 SPVNDVAFSPSNSRFAVLTSDGSLSIYEW 455 (928)
T ss_pred CCcEEEEEeCCCCeEEEEECCCCEEEEEe
Confidence 458999998888 799999998877753
No 69
>PF07312 DUF1459: Protein of unknown function (DUF1459); InterPro: IPR009924 This family consists of several hypothetical Caenorhabditis elegans proteins of around 85 residues in length. The function of this family is unknown.
Probab=20.49 E-value=62 Score=25.31 Aligned_cols=13 Identities=23% Similarity=0.616 Sum_probs=9.8
Q ss_pred CcE-EEEeCCCCCC
Q psy14091 656 GKL-YTWGWGVHGQ 668 (694)
Q Consensus 656 G~v-~~WG~n~~Gq 668 (694)
=.+ |+||+|.+-+
T Consensus 56 Psv~waWGSNKnk~ 69 (84)
T PF07312_consen 56 PSVYWAWGSNKNKQ 69 (84)
T ss_pred cceeeeeccCCCCC
Confidence 346 9999998654
No 70
>KOG0315|consensus
Probab=20.31 E-value=8.6e+02 Score=24.18 Aligned_cols=60 Identities=17% Similarity=0.158 Sum_probs=35.0
Q ss_pred CceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCCcE--EEEEEcCCeEEEEeCC
Q psy14091 145 QYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGHAH--SIALTKAGRVWAFGSG 215 (694)
Q Consensus 145 ~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~--~~~lt~~G~v~~wG~n 215 (694)
..+-+.-+.+|.|+.|-.. .........|.. ...|.+++...+- .++.++.|..|+|-.-
T Consensus 136 QteLis~dqsg~irvWDl~------~~~c~~~liPe~-----~~~i~sl~v~~dgsml~a~nnkG~cyvW~l~ 197 (311)
T KOG0315|consen 136 QTELISGDQSGNIRVWDLG------ENSCTHELIPED-----DTSIQSLTVMPDGSMLAAANNKGNCYVWRLL 197 (311)
T ss_pred cceEEeecCCCcEEEEEcc------CCccccccCCCC-----CcceeeEEEcCCCcEEEEecCCccEEEEEcc
Confidence 3444555788999999632 222222222221 1346666665544 4567889999999653
No 71
>KOG4693|consensus
Probab=20.25 E-value=2.5e+02 Score=27.90 Aligned_cols=61 Identities=21% Similarity=0.327 Sum_probs=36.8
Q ss_pred CcEEEEEECCCEEEeec-CC-CCcCCCC-----CCCCCCCceeecccCCceEEEEecCCCceEEEecCCcEEEEeC
Q psy14091 595 RLHTLVLTSSGVYAWGS-SQ-YGQLGIG-----LIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGW 663 (694)
Q Consensus 595 ~~h~~~l~~~gv~~wG~-n~-~GqLG~g-----~~~~~~~P~~v~~l~~~~v~~is~G~~h~~al~~dG~v~~WG~ 663 (694)
..|+++.-.|.+|.||- |+ .|.+-.= .+....+|+.--.+++ +-+.|++++-.+ ++|.+|-
T Consensus 80 YGHtvV~y~d~~yvWGGRND~egaCN~Ly~fDp~t~~W~~p~v~G~vPg-------aRDGHsAcV~gn-~MyiFGG 147 (392)
T KOG4693|consen 80 YGHTVVEYQDKAYVWGGRNDDEGACNLLYEFDPETNVWKKPEVEGFVPG-------ARDGHSACVWGN-QMYIFGG 147 (392)
T ss_pred cCceEEEEcceEEEEcCccCcccccceeeeeccccccccccceeeecCC-------ccCCceeeEECc-EEEEecC
Confidence 46888888888999984 43 4554332 2233344544333333 345788776654 5999983
Done!