Query psy14091
Match_columns 694
No_of_seqs 397 out of 2862
Neff 9.4
Searched_HMMs 29240
Date Fri Aug 16 19:19:25 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14091.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14091hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4d9s_A UVB-resistance protein 100.0 8E-70 2.7E-74 585.8 42.1 364 86-691 17-383 (406)
2 3kci_A Probable E3 ubiquitin-p 100.0 4E-68 1.4E-72 569.5 32.4 372 40-656 11-388 (389)
3 4d9s_A UVB-resistance protein 100.0 1E-66 3.6E-71 561.5 41.7 362 29-635 14-379 (406)
4 3mvd_K Regulator of chromosome 100.0 7.7E-66 2.6E-70 559.3 40.1 391 27-657 20-420 (423)
5 3kci_A Probable E3 ubiquitin-p 100.0 1.3E-66 4.4E-71 557.9 29.7 359 89-689 5-369 (389)
6 1a12_A RCC1, regulator of chro 100.0 1.7E-65 5.7E-70 554.4 36.3 386 36-658 13-412 (413)
7 3of7_A Regulator of chromosome 100.0 6.8E-65 2.3E-69 558.0 36.7 394 32-654 11-449 (473)
8 3mvd_K Regulator of chromosome 100.0 6.2E-64 2.1E-68 544.4 36.5 350 86-685 25-394 (423)
9 1a12_A RCC1, regulator of chro 100.0 3E-63 1E-67 536.7 35.3 354 89-685 12-385 (413)
10 3of7_A Regulator of chromosome 100.0 3.4E-62 1.2E-66 536.6 32.3 358 86-686 11-427 (473)
11 3qhy_B Beta-lactamase inhibito 100.0 1.7E-51 5.8E-56 418.6 31.9 272 50-659 3-276 (282)
12 3qhy_B Beta-lactamase inhibito 100.0 1.1E-47 3.6E-52 390.7 31.9 227 31-462 24-252 (282)
13 1p22_A F-BOX/WD-repeat protein 96.3 1.3 4.5E-05 46.5 28.8 148 86-265 215-363 (435)
14 2ovr_B FBW7, F-BOX/WD repeat p 96.1 1.7 5.9E-05 45.6 36.8 183 34-266 123-307 (445)
15 1p22_A F-BOX/WD-repeat protein 95.9 2.1 7.2E-05 44.8 38.1 188 32-266 135-324 (435)
16 4gbf_A Phikz131; 7-bladed beta 95.4 0.027 9.3E-07 52.8 6.8 69 31-115 309-379 (400)
17 1k3i_A Galactose oxidase precu 95.1 1.9 6.5E-05 48.3 22.4 108 42-162 190-305 (656)
18 4gbf_A Phikz131; 7-bladed beta 95.0 0.043 1.5E-06 51.5 6.8 72 360-460 309-380 (400)
19 2ovr_B FBW7, F-BOX/WD repeat p 94.1 6.5 0.00022 41.0 36.4 106 138-266 122-227 (445)
20 2zwa_A Leucine carboxyl methyl 93.3 8.2 0.00028 43.4 22.7 143 43-215 392-559 (695)
21 4aez_A CDC20, WD repeat-contai 91.5 14 0.00047 37.9 31.9 186 33-266 96-292 (401)
22 2zwa_A Leucine carboxyl methyl 87.3 18 0.00063 40.5 18.3 19 197-215 598-616 (695)
23 3odt_A Protein DOA1; ubiquitin 87.0 23 0.00077 34.1 28.5 147 82-266 102-254 (313)
24 3odt_A Protein DOA1; ubiquitin 82.7 35 0.0012 32.7 36.0 184 32-266 20-213 (313)
25 4aez_A CDC20, WD repeat-contai 82.5 45 0.0015 33.9 26.5 151 80-265 172-334 (401)
26 1q7f_A NHL, brain tumor CG1071 81.6 38 0.0013 32.3 20.9 15 372-386 211-225 (286)
27 3k26_A Polycomb protein EED; W 80.2 47 0.0016 32.6 27.1 109 136-266 19-146 (366)
28 3zwl_B Eukaryotic translation 79.4 50 0.0017 32.4 29.3 185 44-266 49-248 (369)
29 3v7d_B Cell division control p 77.6 69 0.0024 33.0 37.2 196 33-266 125-340 (464)
30 1pgu_A Actin interacting prote 73.7 1E+02 0.0034 33.0 35.6 141 85-266 254-401 (615)
31 1gxr_A ESG1, transducin-like e 72.0 73 0.0025 30.7 36.7 147 86-266 99-254 (337)
32 1k3i_A Galactose oxidase precu 71.8 1.2E+02 0.0042 33.2 25.2 70 596-667 458-533 (656)
33 1pgu_A Actin interacting prote 70.1 1.2E+02 0.0041 32.4 35.5 67 189-266 162-237 (615)
34 2aq5_A Coronin-1A; WD40 repeat 68.7 1E+02 0.0035 31.0 24.9 141 47-214 55-205 (402)
35 3jrp_A Fusion protein of prote 67.5 97 0.0033 30.4 27.1 183 43-266 27-239 (379)
36 3mmy_A MRNA export factor; mRN 66.0 1E+02 0.0035 30.0 28.2 157 75-266 30-198 (368)
37 3no0_A DNA gyrase subunit A; D 65.9 99 0.0034 29.8 21.3 194 43-265 39-244 (276)
38 1sq9_A Antiviral protein SKI8; 64.4 1.2E+02 0.004 30.2 30.4 202 32-266 18-266 (397)
39 3no2_A Uncharacterized protein 63.8 1E+02 0.0036 29.4 18.6 155 86-265 89-261 (276)
40 1gxr_A ESG1, transducin-like e 63.7 1.1E+02 0.0036 29.4 39.4 158 90-266 7-171 (337)
41 4asc_A Kelch repeat and BTB do 63.3 1.1E+02 0.0039 29.6 16.2 16 41-56 38-53 (315)
42 1xip_A Nucleoporin NUP159; bet 61.3 62 0.0021 33.2 11.8 35 230-266 80-114 (388)
43 3mmy_A MRNA export factor; mRN 60.4 1.3E+02 0.0044 29.3 21.7 110 135-266 39-159 (368)
44 2uvk_A YJHT; unknown function, 60.2 56 0.0019 32.6 11.4 15 42-56 59-73 (357)
45 3sfz_A APAF-1, apoptotic pepti 58.2 2.9E+02 0.01 32.7 31.3 57 198-266 1016-1073(1249)
46 1xip_A Nucleoporin NUP159; bet 56.6 64 0.0022 33.0 11.0 65 190-266 90-154 (388)
47 3sfz_A APAF-1, apoptotic pepti 53.9 3.4E+02 0.012 32.2 27.3 107 137-266 1046-1157(1249)
48 1r5m_A SIR4-interacting protei 53.0 1.8E+02 0.0062 28.8 30.1 98 146-266 218-318 (425)
49 3k26_A Polycomb protein EED; W 53.0 1.7E+02 0.0057 28.4 29.7 153 84-267 18-192 (366)
50 3mkq_A Coatomer beta'-subunit; 52.0 2.8E+02 0.0097 30.7 27.8 176 43-266 71-258 (814)
51 3jro_A Fusion protein of prote 51.7 2.9E+02 0.0099 30.8 25.2 184 43-266 25-237 (753)
52 3uc1_A DNA gyrase subunit A; D 46.8 2.3E+02 0.0077 28.1 21.1 211 37-265 50-277 (327)
53 1sq9_A Antiviral protein SKI8; 45.7 2.3E+02 0.0079 27.9 27.2 166 82-266 14-215 (397)
54 4g56_B MGC81050 protein; prote 42.7 2.6E+02 0.0088 27.5 30.5 145 86-266 141-300 (357)
55 4asc_A Kelch repeat and BTB do 41.5 1.5E+02 0.0051 28.7 10.8 15 42-56 92-106 (315)
56 2vpj_A Kelch-like protein 12; 40.7 2.4E+02 0.0084 26.7 16.1 18 41-58 55-72 (301)
57 3mkq_A Coatomer beta'-subunit; 40.0 4.2E+02 0.014 29.3 30.4 175 43-266 29-216 (814)
58 3jrp_A Fusion protein of prote 39.7 2.7E+02 0.0092 26.9 29.5 149 86-265 13-189 (379)
59 1q7f_A NHL, brain tumor CG1071 38.6 2.5E+02 0.0085 26.2 21.6 15 251-265 211-225 (286)
60 4g56_B MGC81050 protein; prote 37.6 3.1E+02 0.01 27.0 31.3 107 137-266 141-257 (357)
61 3ii7_A Kelch-like protein 7; p 37.5 2.4E+02 0.0084 26.8 11.7 16 42-57 95-110 (306)
62 2woz_A Kelch repeat and BTB do 37.3 2.9E+02 0.0098 26.6 12.3 15 42-56 50-64 (318)
63 3jro_A Fusion protein of prote 35.5 5E+02 0.017 28.8 25.8 111 136-265 54-187 (753)
64 3ii7_A Kelch-like protein 7; p 35.1 3E+02 0.01 26.2 16.8 16 42-57 49-64 (306)
65 3vgz_A Uncharacterized protein 34.6 3.1E+02 0.011 26.2 23.2 22 432-453 268-290 (353)
66 2woz_A Kelch repeat and BTB do 33.4 1.5E+02 0.0053 28.6 9.4 60 41-110 102-166 (318)
67 2vpj_A Kelch-like protein 12; 33.3 3.2E+02 0.011 25.9 12.6 16 42-57 106-121 (301)
68 3v7d_B Cell division control p 32.9 4E+02 0.014 26.9 40.2 156 87-266 125-298 (464)
69 1yfq_A Cell cycle arrest prote 30.9 3.5E+02 0.012 25.7 30.1 158 86-266 13-178 (342)
70 4gqb_B Methylosome protein 50; 30.3 4E+02 0.014 26.1 29.0 186 33-266 85-288 (344)
71 4gqb_B Methylosome protein 50; 29.6 4.1E+02 0.014 26.0 25.1 157 75-266 160-330 (344)
72 2pm9_A Protein WEB1, protein t 27.3 4.5E+02 0.015 25.8 18.5 179 39-263 126-333 (416)
73 2aq5_A Coronin-1A; WD40 repeat 25.7 4.9E+02 0.017 25.6 28.6 152 90-266 40-206 (402)
74 1r5m_A SIR4-interacting protei 24.6 5E+02 0.017 25.4 31.3 156 86-266 110-277 (425)
75 3gre_A Serine/threonine-protei 24.4 5.3E+02 0.018 25.6 18.1 25 239-263 408-436 (437)
76 1nir_A Nitrite reductase; hemo 23.0 6.8E+02 0.023 26.3 13.2 27 189-215 281-310 (543)
77 1zgk_A Kelch-like ECH-associat 21.2 5.3E+02 0.018 24.4 11.8 15 42-56 115-129 (308)
78 2xyi_A Probable histone-bindin 21.2 6.3E+02 0.021 25.3 26.0 253 93-452 140-406 (430)
79 1yfq_A Cell cycle arrest prote 21.2 5.3E+02 0.018 24.3 28.5 188 43-266 27-224 (342)
80 3uc1_A DNA gyrase subunit A; D 20.7 6E+02 0.021 24.9 18.4 162 89-262 48-223 (327)
No 1
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=100.00 E-value=8e-70 Score=585.77 Aligned_cols=364 Identities=30% Similarity=0.567 Sum_probs=323.3
Q ss_pred cEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCC-cEEEEeCC
Q psy14091 86 DVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQG-KLYTWGWG 163 (694)
Q Consensus 86 ~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G-~v~~wG~n 163 (694)
+|++|+||..|+++|+++| ||+||.|.+||||++...+...|++++.+.+.+|++|+||.+|+++|+++| +||+||.|
T Consensus 17 ~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~i~~va~G~~ht~al~~~gg~v~~wG~n 96 (406)
T 4d9s_A 17 KVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDRPSPTQLSALDGHQIVSVTCGADHTVAYSQSGMEVYSWGWG 96 (406)
T ss_dssp CEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCEEEEEECSSEEEEEETTTTEEEEEECC
T ss_pred ceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccCcCCEEecccCCCCEEEEEeCcceEEEEECCCCEEEEEcCC
Confidence 8999999999999999999 999999999999999999899999999998889999999999999999986 99999999
Q ss_pred CCCCCCCCCCCCCCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEE
Q psy14091 164 VHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISM 243 (694)
Q Consensus 164 ~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~ 243 (694)
.+||||.+...+...|.++..+.+.+|++|+||..|+++|+++|+||+||.|.+||||.+.......|.++..+
T Consensus 97 ~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~------ 170 (406)
T 4d9s_A 97 DFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF------ 170 (406)
T ss_dssp GGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGG------
T ss_pred CCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEeccc------
Confidence 99999999988888999999998889999999999999999999999999999999999887766666655221
Q ss_pred EEEccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccc
Q psy14091 244 IATGYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASE 323 (694)
Q Consensus 244 i~~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 323 (694)
T Consensus 171 -------------------------------------------------------------------------------- 170 (406)
T 4d9s_A 171 -------------------------------------------------------------------------------- 170 (406)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccchhhhccccccccccCCCCccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCC
Q psy14091 324 KNETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTP 403 (694)
Q Consensus 324 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p 403 (694)
...+|++|+||.+|+++|+++|+||+||.|.+||||+++......|
T Consensus 171 ----------------------------------~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p 216 (406)
T 4d9s_A 171 ----------------------------------EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVP 216 (406)
T ss_dssp ----------------------------------TTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEE
T ss_pred ----------------------------------CCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCcc
Confidence 1236999999999999999999999999999999999988877777
Q ss_pred eeEeecccccccccCcCCCCcccCCCeEEEEecCceeEEEccCCcEEEEcCCCCCCCCcccccccccccccCCCCCeeEe
Q psy14091 404 TAISINIVMTSSEVSSDERSPLLSSSIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKW 483 (694)
Q Consensus 404 ~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~ 483 (694)
.++.. ....+|++|+||.+|+++|+++|+||+||.|.+||||.++.... .
T Consensus 217 ~~v~~----------------~~~~~i~~va~G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~--------------~ 266 (406)
T 4d9s_A 217 ERVTS----------------TGGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDH--------------L 266 (406)
T ss_dssp EECCC----------------STTCCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCE--------------E
T ss_pred EEecc----------------cCCceEEEEEECCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCc--------------c
Confidence 76642 33468999999999999999999999999999999998754322 0
Q ss_pred eccccCCCcceeeeeecccccceeEeeecCcceeeeeceeeecCCCCccccccccccceeeeeecceeeccCCCCccccc
Q psy14091 484 IPWFDDSSKKINAITFQSSSASWLLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLC 563 (694)
Q Consensus 484 ~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 563 (694)
.| .++
T Consensus 267 ~p------~~v--------------------------------------------------------------------- 271 (406)
T 4d9s_A 267 IP------HKL--------------------------------------------------------------------- 271 (406)
T ss_dssp EE------EEC---------------------------------------------------------------------
T ss_pred cc------EEe---------------------------------------------------------------------
Confidence 11 000
Q ss_pred ccCCcccccccccccccceeeeeeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCCCCCCCCCceeecccCCceEEEE
Q psy14091 564 WWENTLCDKDIVRSHHQMLIMRIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSI 642 (694)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~i 642 (694)
......+|++|+||.+|++||+++| ||+||+|.+||||.++......|++++.+.+.+|++|
T Consensus 272 -----------------~~~~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~v~~v 334 (406)
T 4d9s_A 272 -----------------EALSNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQCSPVQVRFPDDQKVVQV 334 (406)
T ss_dssp -----------------GGGTTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCEEEEEEECCGGGCCEEEE
T ss_pred -----------------cccCCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCCccCEEEeccCCCcEEEE
Confidence 0000125899999999999999999 9999999999999998888889999988777889999
Q ss_pred ecCCCceEEEecCCcEEEEeCCCCCCCCCCCCCCcCCCeeeccccceec
Q psy14091 643 SAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEIS 691 (694)
Q Consensus 643 s~G~~h~~al~~dG~v~~WG~n~~GqLG~g~~~~~~~P~~v~~~~~~~~ 691 (694)
+||.+|++||+++|+||+||+|.+||||+|+..++..|+.|+.|..+-.
T Consensus 335 a~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~g~ 383 (406)
T 4d9s_A 335 SCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALSVDGA 383 (406)
T ss_dssp EECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGCSCSS
T ss_pred EeCCCeEEEEeCCCCEEEecCCCCCccCCCCCCCCcCCEEeeeecCCCc
Confidence 9999999999999999999999999999999999999999998875543
No 2
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=100.00 E-value=4e-68 Score=569.55 Aligned_cols=372 Identities=26% Similarity=0.544 Sum_probs=312.1
Q ss_pred CcEEEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCC
Q psy14091 40 FYHVALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGI 118 (694)
Q Consensus 40 ~~~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~ 118 (694)
..+++|+.||+||+||.|.+||||.+.... ...|+++..+.. .+|++|+||..|+++|+++| ||+||.|.+||||.
T Consensus 11 ~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~-~~~p~~v~~~~~--~~i~~i~~G~~~~~~l~~~G~v~~wG~n~~GqLG~ 87 (389)
T 3kci_A 11 RENLYFQGSGTIYGWGHNHRGQLGGIEGAK-VKVPTPCEALAT--LRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGI 87 (389)
T ss_dssp ----------CEEEEEECTTSTTSSCSCSE-EEEEEECHHHHH--TCEEEEEEETTEEEEEETTSCEEEEECCGGGTTSS
T ss_pred ccceeECCCCeEEEeeCCCCccCCCCcCcc-ccCCEecccccC--CceEEEEeCCCeEEEEcCCCcEEEEECCCCCCCCC
Confidence 344889999999999999999999876543 346777765553 37999999999999999999 99999999999999
Q ss_pred CCCCCCCccEEcCCCCCC--cEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeC
Q psy14091 119 GLIDQSPHPRIIPALANI--RVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGG 196 (694)
Q Consensus 119 ~~~~~~~~p~~v~~~~~~--~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G 196 (694)
+.......|++++.+.+. ++++|+||.+|+++|+++|+||+||.|.+||||.+.......|++++.+.+.+|++|+||
T Consensus 88 g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~va~G 167 (389)
T 3kci_A 88 GGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESLRGIEVVDVAAG 167 (389)
T ss_dssp SSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTSCEEEEEEC
T ss_pred CCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEecccCCCeEEEEEeC
Confidence 998888899999887765 457889999999999999999999999999999999888889999999988899999999
Q ss_pred CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCCCcccchhhHH
Q psy14091 197 HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSSPQVLRSQSQA 276 (694)
Q Consensus 197 ~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~ 276 (694)
..|+++|+++|+||+||.|.+||||.+.......|..+..+
T Consensus 168 ~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~--------------------------------------- 208 (389)
T 3kci_A 168 GAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL--------------------------------------- 208 (389)
T ss_dssp SSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGG---------------------------------------
T ss_pred cCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceEeccc---------------------------------------
Confidence 99999999999999999999999999887766666655221
Q ss_pred HHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccccccccccCCCCccccCeeeecc
Q psy14091 277 QKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFMQSFLSSADDGMAHMSPTLVDTS 356 (694)
Q Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~ 356 (694)
T Consensus 209 -------------------------------------------------------------------------------- 208 (389)
T 3kci_A 209 -------------------------------------------------------------------------------- 208 (389)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCeEEEEecC--ceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccccccccCcCCCCcccCCCeEEEE
Q psy14091 357 HVKAPILQICCGC--HHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVMTSSEVSSDERSPLLSSSIKHIT 434 (694)
Q Consensus 357 ~~~~~i~~I~~G~--~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia 434 (694)
...+|++|+||. .|+++|+++|+||+||.|.+||||.++......|.++.. ....+|++|+
T Consensus 209 -~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~----------------~~~~~v~~v~ 271 (389)
T 3kci_A 209 -QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDS----------------LTGLGVVKVE 271 (389)
T ss_dssp -TTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCEEEEEECGG----------------GTTSCEEEEE
T ss_pred -CCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCccccEEecc----------------cCCCcEEEEe
Confidence 123689999995 899999999999999999999999998877777766642 3345799999
Q ss_pred ecCceeEEEccCCcEEEEcCCCCCCCCcccccccccccccCCCCCeeEeeccccCCCcceeeeeecccccceeEeeecCc
Q psy14091 435 CGGDFSLAMDESGKVWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKWIPWFDDSSKKINAITFQSSSASWLLVASYDC 514 (694)
Q Consensus 435 ~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~ 514 (694)
||.+|++||+++|+||+||.|.+||||.+..... ..| .++
T Consensus 272 ~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~--------------~~P------~~v-------------------- 311 (389)
T 3kci_A 272 CGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHV--------------RRP------RQV-------------------- 311 (389)
T ss_dssp EETTEEEEEETTSCEEEEECCGGGTTCSSSCCCE--------------EEE------EEC--------------------
T ss_pred CCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccc--------------cCC------eEe--------------------
Confidence 9999999999999999999999999998754322 001 001
Q ss_pred ceeeeeceeeecCCCCccccccccccceeeeeecceeeccCCCCcccccccCCcccccccccccccceeeeeeEEEEecC
Q psy14091 515 SLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLCWWENTLCDKDIVRSHHQMLIMRIDVSSVACG 594 (694)
Q Consensus 515 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G 594 (694)
......+|++|+||
T Consensus 312 ------------------------------------------------------------------~~l~~~~v~~ia~G 325 (389)
T 3kci_A 312 ------------------------------------------------------------------QGLQGKKVIAIATG 325 (389)
T ss_dssp ------------------------------------------------------------------GGGTTCCEEEEEEC
T ss_pred ------------------------------------------------------------------ccCCCCCEEEEEec
Confidence 00011368999999
Q ss_pred CcEEEEEECCC-EEEeecCCCCcCCCCCCCCCCCceeecccCCceEEEEecCCCceEEEecCC
Q psy14091 595 RLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQG 656 (694)
Q Consensus 595 ~~h~~~l~~~g-v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~is~G~~h~~al~~dG 656 (694)
..|++||+++| ||+||.|.+||||+++......|++|+.+.+.+|++|+||.+|++||++++
T Consensus 326 ~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~~~~~~v~~va~G~~ht~al~~~~ 388 (389)
T 3kci_A 326 SLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSK 388 (389)
T ss_dssp SSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTSCCCEEEEETTEEEEECC--
T ss_pred cCeEEEECCCCCEEEeeCCCCCcCCCCCCCCccCcEEecccCCCCEEEEEecCCcEEEEecCC
Confidence 99999999999 999999999999999998899999999999999999999999999999864
No 3
>4d9s_A UVB-resistance protein UVR8; UV resistance, UV-B photoreceptor, tryptophan chromophores, homodimer, COP1, chromatin-binding protein; 1.70A {Arabidopsis thaliana} PDB: 4dnw_A 4dnu_A 4dnv_A
Probab=100.00 E-value=1e-66 Score=561.49 Aligned_cols=362 Identities=34% Similarity=0.569 Sum_probs=314.8
Q ss_pred cCCCeEEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC--e
Q psy14091 29 VEIPEVPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG--V 105 (694)
Q Consensus 29 ~~~~i~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G--v 105 (694)
+..+|++|++|..| +||+++|+||+||.|.+||||.+..... ..|.++..+. ..+|++|+||..|+++|+++| |
T Consensus 14 ~~~~v~~ia~G~~hs~al~~~g~v~~wG~n~~GqLG~g~~~~~-~~P~~v~~l~--~~~i~~va~G~~ht~al~~~gg~v 90 (406)
T 4d9s_A 14 PPRKVLIISAGASHSVALLSGDIVCSWGRGEDGQLGHGDAEDR-PSPTQLSALD--GHQIVSVTCGADHTVAYSQSGMEV 90 (406)
T ss_dssp -CCCEEEEEECSSEEEEEETTTEEEEEECCTTSTTCSSSCCCE-EEEEECGGGT--TSCEEEEEECSSEEEEEETTTTEE
T ss_pred CccceEEEecCCCeEEEEEeCCEEEEEeCCCCCCCCCCCcccC-cCCEEecccC--CCCEEEEEeCcceEEEEECCCCEE
Confidence 34589999999999 9999999999999999999999987654 4677666554 448999999999999999874 9
Q ss_pred EEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEeccc
Q psy14091 106 YAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKAL 185 (694)
Q Consensus 106 y~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~ 185 (694)
|+||.|.+||||.+.......|.+++.+.+.+|++|+||.+|+++|+++|+||+||.|.+||||.+.......|+++..+
T Consensus 91 ~~wG~n~~GqLG~g~~~~~~~p~~v~~l~~~~i~~ia~G~~h~~alt~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~~ 170 (406)
T 4d9s_A 91 YSWGWGDFGRLGHGNSSDLFTPLPIKALHGIRIKQIACGDSHCLAVTMEGEVQSWGRNQNGQLGLGDTEDSLVPQKIQAF 170 (406)
T ss_dssp EEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGG
T ss_pred EEEcCCCCcCCCCCCCCccccceEecccCCCCEEEEEEChhheEEEcCCCcEEEeCCCCCccCCCCCCCCcccceEeccc
Confidence 99999999999999988888999999998889999999999999999999999999999999999998888899999999
Q ss_pred CCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecC
Q psy14091 186 EHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGS 265 (694)
Q Consensus 186 ~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~ 265 (694)
.+.+|++|+||.+|+++|+++|+||+||.|.+||||.+.......|.++..+
T Consensus 171 ~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~~---------------------------- 222 (406)
T 4d9s_A 171 EGIRIKMVAAGAEHTAAVTEDGDLYGWGWGRYGNLGLGDRTDRLVPERVTST---------------------------- 222 (406)
T ss_dssp TTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSCCEEEEEECCCS----------------------------
T ss_pred CCCcEEEEecCCCeEEEEeCCCCEEEeeCCCCCCCCCCCCCCcCccEEeccc----------------------------
Confidence 8889999999999999999999999999999999999877766666555211
Q ss_pred CCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccccccccccCCCC
Q psy14091 266 SPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFMQSFLSSADDGM 345 (694)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 345 (694)
T Consensus 223 -------------------------------------------------------------------------------- 222 (406)
T 4d9s_A 223 -------------------------------------------------------------------------------- 222 (406)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccccccccCcCCCCcc
Q psy14091 346 AHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVMTSSEVSSDERSPL 425 (694)
Q Consensus 346 ~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~ 425 (694)
...+|++|+||.+|+++|+++|+||+||.|.+||||+++......|+++.. .
T Consensus 223 ------------~~~~i~~va~G~~ht~~l~~~G~v~~wG~n~~GqlG~g~~~~~~~p~~v~~----------------~ 274 (406)
T 4d9s_A 223 ------------GGEKMSMVACGWRHTISVSYSGALYTYGWSKYGQLGHGDLEDHLIPHKLEA----------------L 274 (406)
T ss_dssp ------------TTCCEEEEEECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGG----------------G
T ss_pred ------------CCceEEEEEECCCcEEEEcCCCCEEEeeCCCCCCCCCCCCcCccccEEecc----------------c
Confidence 123699999999999999999999999999999999998887777777642 3
Q ss_pred cCCCeEEEEecCceeEEEccCCcEEEEcCCCCCCCCcccccccccccccCCCCCeeEeeccccCCCcceeeeeecccccc
Q psy14091 426 LSSSIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKWIPWFDDSSKKINAITFQSSSAS 505 (694)
Q Consensus 426 ~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~ 505 (694)
...+|++|+||.+|++||+++|+||+||+|.+||||.+...+. ..| .++
T Consensus 275 ~~~~v~~i~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~--------------~~p------~~v----------- 323 (406)
T 4d9s_A 275 SNSFISQISGGWRHTMALTSDGKLYGWGWNKFGQVGVGNNLDQ--------------CSP------VQV----------- 323 (406)
T ss_dssp TTSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSSSCE--------------EEE------EEE-----------
T ss_pred CCCCEEEEEecCCEEEEEcCCCeEEEeeCCCCCCCCCCCCCCC--------------ccC------EEE-----------
Confidence 3467999999999999999999999999999999998754332 000 000
Q ss_pred eeEeeecCcceeeeeceeeecCCCCccccccccccceeeeeecceeeccCCCCcccccccCCcccccccccccccceeee
Q psy14091 506 WLLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLCWWENTLCDKDIVRSHHQMLIMR 585 (694)
Q Consensus 506 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 585 (694)
..+..
T Consensus 324 ---------------------------------------------------------------------------~~~~~ 328 (406)
T 4d9s_A 324 ---------------------------------------------------------------------------RFPDD 328 (406)
T ss_dssp ---------------------------------------------------------------------------CCGGG
T ss_pred ---------------------------------------------------------------------------eccCC
Confidence 00112
Q ss_pred eeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCCCCCCCCCceeecccC
Q psy14091 586 IDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALA 635 (694)
Q Consensus 586 ~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~ 635 (694)
.+|++|+||.+|++||+++| ||+||+|.+||||+|+..+...|++|+.+.
T Consensus 329 ~~v~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~ 379 (406)
T 4d9s_A 329 QKVVQVSCGWRHTLAVTERNNVFAWGRGTNGQLGIGESVDRNFPKIIEALS 379 (406)
T ss_dssp CCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCCCEEEEEECGGGC
T ss_pred CcEEEEEeCCCeEEEEeCCCCEEEecCCCCCccCCCCCCCCcCCEEeeeec
Confidence 36999999999999999999 999999999999999998889999998654
No 4
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=100.00 E-value=7.7e-66 Score=559.34 Aligned_cols=391 Identities=24% Similarity=0.354 Sum_probs=310.2
Q ss_pred cccCCCeEEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-
Q psy14091 27 PLVEIPEVPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG- 104 (694)
Q Consensus 27 ~~~~~~i~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G- 104 (694)
.....++++|++|..| ++|+++|+||+||.|.+||||.+........|.+++.+. +|++|+||..|+++|+++|
T Consensus 20 ~~~~~~~~~ia~g~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~----~v~~va~G~~h~~~l~~~G~ 95 (423)
T 3mvd_K 20 QPPKAKRARIAFHLELPKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIP----DAVDISAGGMHNLVLTKSGD 95 (423)
T ss_dssp ---------CCCCCCCCCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECCSCS----SEEEEEECSSEEEEEETTSC
T ss_pred CCccceeeEEecCCccceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEccCCC----CceEEeeCCCeEEEEeCCCe
Confidence 4456788899999999 999999999999999999999997655555677776554 6999999999999999999
Q ss_pred eEEEeCCCCCccCCCCCCC--CCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeC--CCCCCCCCCCCCCCCCCE
Q psy14091 105 VYAWGSSQYGQLGIGLIDQ--SPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGW--GVHGQLGLNTVEDMSEPQ 180 (694)
Q Consensus 105 vy~wG~n~~gqLG~~~~~~--~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~--n~~gqlg~~~~~~~~~p~ 180 (694)
||+||.|.+||||.+.... ...|.++... .+|++|+||.+|+++|+++|+||+||. |.+||||.+.......|
T Consensus 96 v~~wG~n~~GqLG~~~~~~~~~~~P~~v~~~--~~i~~va~G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p- 172 (423)
T 3mvd_K 96 IYSFGCNDEGALGRDTSEDGSESKPDLIDLP--GKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTP- 172 (423)
T ss_dssp EEEEECCSSSTTCSCCCSTTSSSSCEECCCS--SCEEEEEECSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEE-
T ss_pred EEEeECCCCcCCCCCCcCCccccCCeEEcCC--CCEEEEEcCcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCcee-
Confidence 9999999999999988654 5778888743 469999999999999999999999999 99999999876655444
Q ss_pred EecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcE
Q psy14091 181 LVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRL 260 (694)
Q Consensus 181 ~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v 260 (694)
+..+...+|++|+||.+|+++|+++|+||+||.|.+||||.+.......+...
T Consensus 173 -~~~~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~-------------------------- 225 (423)
T 3mvd_K 173 -IDLMEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERSISGEGRR-------------------------- 225 (423)
T ss_dssp -EESSTTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTTTTSCSTT--------------------------
T ss_pred -eEecCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCccccccccccc--------------------------
Confidence 44566778999999999999999999999999999999998764432111000
Q ss_pred EEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccccccccc
Q psy14091 261 YTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFMQSFLSS 340 (694)
Q Consensus 261 ~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 340 (694)
T Consensus 226 -------------------------------------------------------------------------------- 225 (423)
T 3mvd_K 226 -------------------------------------------------------------------------------- 225 (423)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCCCCccccCeeeeccCCCCCeEEEEecCceeEEE-eCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccccccccCc
Q psy14091 341 ADDGMAHMSPTLVDTSHVKAPILQICCGCHHSMLL-SREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVMTSSEVSS 419 (694)
Q Consensus 341 ~~~~~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aL-t~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~ 419 (694)
.......|..+.. ....+|++|+||.+|++++ +++|+||+||.|.+||||.+.......+.++.+
T Consensus 226 --~~~~~~~p~~v~~-~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~~~~~~p~~~----------- 291 (423)
T 3mvd_K 226 --GKRDLLRPTQLII-TRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGKEFALTPIKT----------- 291 (423)
T ss_dssp --TTTTTSSCEEECC-TTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTCSEEEEEEEE-----------
T ss_pred --ccccccCCeEEee-cCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCCceeeeeEEc-----------
Confidence 0001123444432 1234799999999999999 699999999999999999966544433344332
Q ss_pred CCCCcccCCCeEEEEecCceeEEEccCCcEEEEcCCCCCCCCcccccccccccccCCCCCeeEeeccccCCCcceeeeee
Q psy14091 420 DERSPLLSSSIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKWIPWFDDSSKKINAITF 499 (694)
Q Consensus 420 ~~~~~~~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~ 499 (694)
...+|++|+||.+|++||+++|+||+||+|.+||||.+..... . . .| .++
T Consensus 292 ------~~~~v~~ia~G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~-----------~-~-~p------~~v----- 341 (423)
T 3mvd_K 292 ------ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDV-----------V-E-KP------TIV----- 341 (423)
T ss_dssp ------CCCSEEEEEECSSEEEEEETTCCEEEEECCGGGTTCSSSCCSC-----------E-E-EE------EEC-----
T ss_pred ------CCCCeEEEEcccCeEEEEeCCCcEEEEECCCCCCCCCCCcccc-----------c-c-Cc------eEe-----
Confidence 1357999999999999999999999999999999998754321 0 0 00 000
Q ss_pred cccccceeEeeecCcceeeeeceeeecCCCCccccccccccceeeeeecceeeccCCCCcccccccCCcccccccccccc
Q psy14091 500 QSSSASWLLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLCWWENTLCDKDIVRSHH 579 (694)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~ 579 (694)
T Consensus 342 -------------------------------------------------------------------------------- 341 (423)
T 3mvd_K 342 -------------------------------------------------------------------------------- 341 (423)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cceeeeeeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCCCCCCCCCceeecc--cCCceEEEEecCCCceEEEecCC
Q psy14091 580 QMLIMRIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPA--LANIRVVSISAGQYHSLAITSQG 656 (694)
Q Consensus 580 ~~~~~~~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g~~~~~~~P~~v~~--l~~~~v~~is~G~~h~~al~~dG 656 (694)
. ....+|++|+||..|++||+++| ||+||.|.+||||+++..+...|++|.. +.+.+|++|+||.+|++||++++
T Consensus 342 -~-~l~~~v~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~~~~~~~~v~~va~G~~ht~~l~~~~ 419 (423)
T 3mvd_K 342 -K-KLTEKIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVSKNTQGKHMLLASGGGQHAIFLVKAD 419 (423)
T ss_dssp -T-TCCSCEEEEEEETTEEEEEETTSCEEEEECCTTSCSSSSSSCCEEEEEECCSTTTTTCCEEEEEECSSEEEEEEECC
T ss_pred -c-cCCCCEEEEEcCCCeEEEEcCCCCEEEECCCCCCCCCCCCCCCcccCeEEeCcccCCCEEEEEEECCCcEEEEEccc
Confidence 0 00015899999999999999999 9999999999999999988889999985 67788999999999999999987
Q ss_pred c
Q psy14091 657 K 657 (694)
Q Consensus 657 ~ 657 (694)
+
T Consensus 420 k 420 (423)
T 3mvd_K 420 K 420 (423)
T ss_dssp -
T ss_pred c
Confidence 5
No 5
>3kci_A Probable E3 ubiquitin-protein ligase HERC2; WD40, RCC1, structural genomics consortium, SGC, coiled coil, metal-binding, phosphoprotein; 1.80A {Homo sapiens}
Probab=100.00 E-value=1.3e-66 Score=557.88 Aligned_cols=359 Identities=31% Similarity=0.597 Sum_probs=301.2
Q ss_pred EEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCC
Q psy14091 89 SVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQ 167 (694)
Q Consensus 89 ~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gq 167 (694)
++..-..+.++|+++| ||+||.|.+||||.+.......|++++.+...+|++|+||.+|+++|+++|+||+||.|.+||
T Consensus 5 ~~~~~~~~~~~l~~~G~v~~wG~n~~GqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~l~~~G~v~~wG~n~~Gq 84 (389)
T 3kci_A 5 HHHSSGRENLYFQGSGTIYGWGHNHRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGR 84 (389)
T ss_dssp ----------------CEEEEEECTTSTTSSCSCSEEEEEEECHHHHHTCEEEEEEETTEEEEEETTSCEEEEECCGGGT
T ss_pred ccccCcccceeECCCCeEEEeeCCCCccCCCCcCccccCCEecccccCCceEEEEeCCCeEEEEcCCCcEEEEECCCCCC
Confidence 4455667789999999 999999999999998888888999998888888999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCEEecccCCc--eEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEE
Q psy14091 168 LGLNTVEDMSEPQLVKALEHE--VIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIA 245 (694)
Q Consensus 168 lg~~~~~~~~~p~~v~~~~~~--~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~ 245 (694)
||.+.......|++++.+... ++++|+||.+|+++|+++|+||+||.|.+||||.+.......|..+..+
T Consensus 85 LG~g~~~~~~~p~~v~~~~~~~~~~v~i~~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~p~~v~~l-------- 156 (389)
T 3kci_A 85 LGIGGTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCDRPRVIESL-------- 156 (389)
T ss_dssp TSSSSSCCEEEEEECGGGTTSCEEEEEECTTCSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGG--------
T ss_pred CCCCCcCCccCCEEcccccCCceeEEEECcCCCeEEEEcCCCCEEEEeCCCCCcCCCCCCccCcCCeEeccc--------
Confidence 999998888899999987765 4578899999999999999999999999999999877666666555221
Q ss_pred EccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccccc
Q psy14091 246 TGYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKN 325 (694)
Q Consensus 246 ~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 325 (694)
T Consensus 157 -------------------------------------------------------------------------------- 156 (389)
T 3kci_A 157 -------------------------------------------------------------------------------- 156 (389)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cchhhhccccccccccCCCCccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCCee
Q psy14091 326 ETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTA 405 (694)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~ 405 (694)
...+|++|+||..|+++|+++|+||+||.|.+||||+++......|++
T Consensus 157 --------------------------------~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~p~~ 204 (389)
T 3kci_A 157 --------------------------------RGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKL 204 (389)
T ss_dssp --------------------------------TTSCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEE
T ss_pred --------------------------------CCCeEEEEEeCcCeEEEEeCCCeEEEeCCCCCCCcCCCCCcccccceE
Confidence 123699999999999999999999999999999999998887777776
Q ss_pred EeecccccccccCcCCCCcccCCCeEEEEecC--ceeEEEccCCcEEEEcCCCCCCCCcccccccccccccCCCCCeeEe
Q psy14091 406 ISINIVMTSSEVSSDERSPLLSSSIKHITCGG--DFSLAMDESGKVWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKW 483 (694)
Q Consensus 406 v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~--~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~ 483 (694)
+.. ....+|++|+||. .|+++|+++|+||+||.|.+||||.+..... .
T Consensus 205 v~~----------------~~~~~v~~ia~G~g~~~t~~l~~~G~v~~wG~n~~GqLG~g~~~~~--------------~ 254 (389)
T 3kci_A 205 VEA----------------LQGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGC--------------K 254 (389)
T ss_dssp CGG----------------GTTSCEEEEEECCSSCEEEEEETTTEEEEEECCGGGTTSSSSCCCE--------------E
T ss_pred ecc----------------cCCCeEEEEEEcCCCcEEEEEccCCEEEEEeCCCCCCCCCCCCCCc--------------c
Confidence 642 3456899999995 8999999999999999999999998754322 0
Q ss_pred eccccCCCcceeeeeecccccceeEeeecCcceeeeeceeeecCCCCccccccccccceeeeeecceeeccCCCCccccc
Q psy14091 484 IPWFDDSSKKINAITFQSSSASWLLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLC 563 (694)
Q Consensus 484 ~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~ 563 (694)
.| .++
T Consensus 255 ~p------~~v--------------------------------------------------------------------- 259 (389)
T 3kci_A 255 VP------MKI--------------------------------------------------------------------- 259 (389)
T ss_dssp EE------EEC---------------------------------------------------------------------
T ss_pred cc------EEe---------------------------------------------------------------------
Confidence 11 000
Q ss_pred ccCCcccccccccccccceeeeeeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCCCCCCCCCceeecccCCceEEEE
Q psy14091 564 WWENTLCDKDIVRSHHQMLIMRIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSI 642 (694)
Q Consensus 564 ~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~i 642 (694)
......+|++|+||.+|++||+++| ||+||.|.+||||+++......|++|+.+.+.+|++|
T Consensus 260 -----------------~~~~~~~v~~v~~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~i 322 (389)
T 3kci_A 260 -----------------DSLTGLGVVKVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAI 322 (389)
T ss_dssp -----------------GGGTTSCEEEEEEETTEEEEEETTSCEEEEECCGGGTTCSSSCCCEEEEEECGGGTTCCEEEE
T ss_pred -----------------cccCCCcEEEEeCCCCEEEEEeCCCeEEEEeCCCCCCCCCCCCccccCCeEeccCCCCCEEEE
Confidence 0000125899999999999999999 9999999999999999888889999999998899999
Q ss_pred ecCCCceEEEecCCcEEEEeCCCCCCCCCCCCCCcCCCeeeccccce
Q psy14091 643 SAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHE 689 (694)
Q Consensus 643 s~G~~h~~al~~dG~v~~WG~n~~GqLG~g~~~~~~~P~~v~~~~~~ 689 (694)
+||.+|++||++||+||+||+|.+||||+|+..++.+|++|+.+++.
T Consensus 323 a~G~~h~~al~~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~~~~~ 369 (389)
T 3kci_A 323 ATGSLHCVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGK 369 (389)
T ss_dssp EECSSEEEEEETTCCEEEEECCTTSTTCSSSCCCEEEEEECGGGTTS
T ss_pred EeccCeEEEECCCCCEEEeeCCCCCcCCCCCCCCccCcEEecccCCC
Confidence 99999999999999999999999999999999999999999988763
No 6
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=100.00 E-value=1.7e-65 Score=554.37 Aligned_cols=386 Identities=27% Similarity=0.368 Sum_probs=307.1
Q ss_pred eeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eEEEeCCCC
Q psy14091 36 LSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VYAWGSSQY 113 (694)
Q Consensus 36 v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy~wG~n~~ 113 (694)
.+.+..| ++|+.+|+||+||.|.+||||.+........|..+..+ .+|++|+||..|+++|+++| ||+||.|.+
T Consensus 13 ~~~~~~h~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~~----~~i~~va~G~~hs~~l~~~G~v~~wG~n~~ 88 (413)
T 1a12_A 13 KKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIP----EDVVQAEAGGMHTVCLSKSGQVYSFGCNDE 88 (413)
T ss_dssp CCCCCCCTTCCCCCBEEEEEEECTTSTTCSCTTCCEEEEEEEECCS----SCEEEEEECSSEEEEEETTSCEEEEECCTT
T ss_pred hhhccccceeecCCCcEEEEECCCCCcCCCCCCccccccceEccCC----CCeEEEEeCCCeEEEEcCCCCEEEEECCCC
Confidence 3445678 99999999999999999999999876544567777643 48999999999999999999 999999999
Q ss_pred CccCCCCCC--CCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeC--CCCCCCCCCCCCCC-CCCEEecccCCc
Q psy14091 114 GQLGIGLID--QSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGW--GVHGQLGLNTVEDM-SEPQLVKALEHE 188 (694)
Q Consensus 114 gqLG~~~~~--~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~--n~~gqlg~~~~~~~-~~p~~v~~~~~~ 188 (694)
||||.+... ....|+++.. ..+|++|+||.+|+++|+++|+||+||. |.+||||.+..... ..|.++ +...
T Consensus 89 GqLG~~~~~~~~~~~P~~v~l--~~~i~~va~G~~hs~alt~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v--~~~~ 164 (413)
T 1a12_A 89 GALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV--QLDV 164 (413)
T ss_dssp STTCSCCCSTTGGGSCEECCC--CSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE--CCSS
T ss_pred CCCCCCCCCCccccCCeEecC--CCcEEEEecCCCeEEEEcCCCcEEEeeCCcCCCCccCcCCccccccCCEEe--cCCC
Confidence 999998763 4567888854 2379999999999999999999999999 89999998875443 347766 4556
Q ss_pred eEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCCCc
Q psy14091 189 VIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSSPQ 268 (694)
Q Consensus 189 ~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~~~ 268 (694)
+|++|+||.+|+++|+++|+||+||.|.+||||.+...........
T Consensus 165 ~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~---------------------------------- 210 (413)
T 1a12_A 165 PVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFANRGGRQ---------------------------------- 210 (413)
T ss_dssp CEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSSSCGGG----------------------------------
T ss_pred CEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCccccccccccc----------------------------------
Confidence 7999999999999999999999999999999998643211000000
Q ss_pred ccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccccccccccCCCCccc
Q psy14091 269 VLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFMQSFLSSADDGMAHM 348 (694)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (694)
. .....
T Consensus 211 -----~---------------------------------------------------------------------~~~~~ 216 (413)
T 1a12_A 211 -----G---------------------------------------------------------------------LERLL 216 (413)
T ss_dssp -----G---------------------------------------------------------------------HHHHH
T ss_pred -----c---------------------------------------------------------------------ccccc
Confidence 0 00001
Q ss_pred cCeeeecc----CCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccccccccCcCCCCc
Q psy14091 349 SPTLVDTS----HVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVMTSSEVSSDERSP 424 (694)
Q Consensus 349 ~p~~v~~~----~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~~~~~~ 424 (694)
.|..+... ....+|++|+||..|+++|+++|+||+||.|.+||||.++......|+++....
T Consensus 217 ~P~~v~~~~~g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~~~P~~v~~l~-------------- 282 (413)
T 1a12_A 217 VPKCVMLKSRGSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESCFIPQNLTSFK-------------- 282 (413)
T ss_dssp SCEECCCBCSSCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCEEEEEECGGGC--------------
T ss_pred cCceEeeccccccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcccccEEchhcc--------------
Confidence 22222211 023479999999999999999999999999999999999887776676663210
Q ss_pred ccCCCeEEEEecCceeEEEccCCcEEEEcCCCCCCCCcccccccccccccCCCCCeeEeeccccCCCcceeeeeeccccc
Q psy14091 425 LLSSSIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKWIPWFDDSSKKINAITFQSSSA 504 (694)
Q Consensus 425 ~~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~ 504 (694)
....+|++|+||.+|++||+++|+||+||.|.+||||.+..... . ..| .+|
T Consensus 283 ~~~~~v~~ia~G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~----------~---~~P------~~v---------- 333 (413)
T 1a12_A 283 NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEE----------K---SIP------TLI---------- 333 (413)
T ss_dssp CTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCC----------E---EEE------EEC----------
T ss_pred CCCceEEEEecccceEEEEeCCCCEEEeeCCCCCccCCCCCCcc----------c---cCC------EEe----------
Confidence 11246999999999999999999999999999999998742211 0 000 000
Q ss_pred ceeEeeecCcceeeeeceeeecCCCCccccccccccceeeeeecceeeccCCCCcccccccCCcccccccccccccceee
Q psy14091 505 SWLLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLCWWENTLCDKDIVRSHHQMLIM 584 (694)
Q Consensus 505 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~ 584 (694)
..
T Consensus 334 ------------------------------------------------------------------------------~~ 335 (413)
T 1a12_A 334 ------------------------------------------------------------------------------SR 335 (413)
T ss_dssp ------------------------------------------------------------------------------CS
T ss_pred ------------------------------------------------------------------------------cc
Confidence 00
Q ss_pred eeeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCCCCCCCCCceeecc--cCCceEEEEecCCCceEEEecCCcE
Q psy14091 585 RIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPA--LANIRVVSISAGQYHSLAITSQGKL 658 (694)
Q Consensus 585 ~~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g~~~~~~~P~~v~~--l~~~~v~~is~G~~h~~al~~dG~v 658 (694)
..+|++|+||.+|++||+++| ||+||.|.+||||.++..+...|++|+. +.+.+|++|+||.+|++||+++|++
T Consensus 336 l~~v~~v~~G~~hs~alt~~G~v~~wG~n~~gqLG~g~~~~~~~P~~v~~~~~~~~~v~~v~~G~~ht~~l~~~g~~ 412 (413)
T 1a12_A 336 LPAVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMGKQLENRVVLSVSSGGQHTVLLVKDKEQ 412 (413)
T ss_dssp SSSEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCSTTTTTEEEEEEEECSSEEEEEEEECSC
T ss_pred cCceeEEEECcceEEEEeCCCCEEEecCCCCCCCCCCCCCCcccCeEccccccCCCeEEEEeeCCCcEEEEEecCCC
Confidence 115899999999999999999 9999999999999998888889999974 5677899999999999999999864
No 7
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=6.8e-65 Score=558.01 Aligned_cols=394 Identities=25% Similarity=0.421 Sum_probs=311.4
Q ss_pred CeEEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCC--ccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eEE
Q psy14091 32 PEVPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMS--QISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VYA 107 (694)
Q Consensus 32 ~i~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~--~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy~ 107 (694)
.+....+++.| ++++++|+||+||.|.+||||.|.... ....|..++.+.....+|++|+||..|+++|+++| ||+
T Consensus 11 ~~~~~~~~~~h~~~~~~~g~v~~wG~n~~GqLG~G~~~~~~~~~~P~~~~~~~~~~~~i~~va~G~~Ht~alt~~G~v~~ 90 (473)
T 3of7_A 11 HIINAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 90 (473)
T ss_dssp TCCCCGGGGHHHHCCSSCCEEEEEEECTTSTTCSCSCGGGGEEEEEEECTTSCTTTTCEEEEEECSSEEEEEETTCCEEE
T ss_pred hhhhhcccccccccCCCCccEEEEcCCCCCccCCCCCcccccccCcccccccccCCCCEEEEEeCCCeEEEEecCCeEEE
Confidence 45566788888 889999999999999999999998642 23467776666555669999999999999999999 999
Q ss_pred EeCCCCCccCCCCCCC-----------------------CCccEEcCC--C----CCCcEEEEEecCceEEEEEcCCcEE
Q psy14091 108 WGSSQYGQLGIGLIDQ-----------------------SPHPRIIPA--L----ANIRVVSISAGQYHSLAITSQGKLY 158 (694)
Q Consensus 108 wG~n~~gqLG~~~~~~-----------------------~~~p~~v~~--~----~~~~i~~i~~G~~~s~~lt~~G~v~ 158 (694)
||.|.+||||.+.... ...|++++. + .+.+|++|+||.+|+++|+++|+||
T Consensus 91 wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~~~~~i~~va~G~~hs~alt~~G~vy 170 (473)
T 3of7_A 91 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVY 170 (473)
T ss_dssp EECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHHTTCCEEEEEECSSEEEEEETTSCEE
T ss_pred eECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCcccCCCcEEEEEccCCEEEEEeCCCeEE
Confidence 9999999999987654 457888875 4 3678999999999999999999999
Q ss_pred EEeC--CCCCCCCCCCC--CCCCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceee
Q psy14091 159 TWGW--GVHGQLGLNTV--EDMSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIEL 234 (694)
Q Consensus 159 ~wG~--n~~gqlg~~~~--~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~ 234 (694)
+||. +.+||||.... .....|.+++.+.+.+|++|+||.+|+++|+++|+||+||.|.+||||.+.......+
T Consensus 171 ~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~--- 247 (473)
T 3of7_A 171 AWGTFRCNEGILGFYQDKIKIQKTPWKVPTFSKYNIVQLAPGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLK--- 247 (473)
T ss_dssp EEECEEETTEEEESBTTTBSCEEEEEECCCCCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCCGGGTTT---
T ss_pred EeeCCcCCCCccCCCCCCCccccCcEEccccCCCCEEEEEecCCeEEEEeCCCeEEEEeCCCCCCCCCCcccccccc---
Confidence 9998 67899998543 3456788888888888999999999999999999999999999999998653321111
Q ss_pred ccCCCCeEEEEEccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeee
Q psy14091 235 YGLPEPISMIATGYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHL 314 (694)
Q Consensus 235 ~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 314 (694)
T Consensus 248 -------------------------------------------------------------------------------- 247 (473)
T 3of7_A 248 -------------------------------------------------------------------------------- 247 (473)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCcccccccchhhhccccccccccCCCCccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCC
Q psy14091 315 APSPSSASEKNETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGN 394 (694)
Q Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~ 394 (694)
...|..+.. .+|++|+||.+|++||+++|+||+||.|.+||||.
T Consensus 248 --------------------------------~~~p~~~~~----~~v~~Ia~G~~hs~alt~~G~v~~wG~n~~GqlG~ 291 (473)
T 3of7_A 248 --------------------------------TLDPRPFGL----RHVKYIASGENHCFALTKDNKLVSWGLNQFGQCGV 291 (473)
T ss_dssp --------------------------------TCSCEECSC----CSEEEEEECSSEEEEEETTSCEEEEEECTTSTTCC
T ss_pred --------------------------------ccCceecCC----cceEEEecCCCeEEEEecCCCEEEeCCCCCCCcCC
Confidence 011222211 36999999999999999999999999999999999
Q ss_pred CCCcC----ccCCeeEeecccccccccCcCCCCcccCCCeEEEEecCceeEEEccCCcEEEEcCCCCCCCCccccccccc
Q psy14091 395 GSRKE----VHTPTAISINIVMTSSEVSSDERSPLLSSSIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPRYIGELLFY 470 (694)
Q Consensus 395 g~~~~----~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~~~ 470 (694)
++... ...|+++.. ....+|++|+||.+|+++|+++|+||+||.|.+||||.+.......
T Consensus 292 ~~~~~~~~~~~~P~~v~~----------------~~~~~i~~ia~G~~hs~~lt~~G~v~~wG~n~~GqLG~~~~~~~~~ 355 (473)
T 3of7_A 292 SEDVEDGALVTKPKRLAL----------------PDNVVIRSIAAGEHHSLILSQDGDLYSCGRLDMFEVGIPKDNLPEY 355 (473)
T ss_dssp CSCCCTTCEEEEEEECCC----------------CTTCCEEEEEECSSEEEEEETTSCEEEEEECTTCTTCCCGGGCCTT
T ss_pred CCcccCCceeeccccccc----------------cCCccEEEEEeCCCeEEEEeCCCeEEEEECCCCCccCCCccccccc
Confidence 87542 234444432 3346899999999999999999999999999999999875421100
Q ss_pred ccccCCCCCeeEeeccccCCCcceeeeeecccccceeEeeecCcceeeeeceeeecCCCCccccccccccceeeeeecce
Q psy14091 471 KFNFDPVGPLVKWIPWFDDSSKKINAITFQSSSASWLLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQGK 550 (694)
Q Consensus 471 ~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 550 (694)
.+ .+...... ....|
T Consensus 356 ~~-~~~~~~~~----------------------------------~~~~P------------------------------ 370 (473)
T 3of7_A 356 TY-KDVHGKAR----------------------------------AVPLP------------------------------ 370 (473)
T ss_dssp CE-ECTTSCEE----------------------------------EEEEE------------------------------
T ss_pred cc-cccCCcee----------------------------------eeccC------------------------------
Confidence 00 00000000 00000
Q ss_pred eeccCCCCcccccccCCcccccccccccccceeeeeeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCCC-CCCCCCc
Q psy14091 551 NVNCENLTPCCLCWWENTLCDKDIVRSHHQMLIMRIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGL-IDQSPHP 628 (694)
Q Consensus 551 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g~-~~~~~~P 628 (694)
..+....+|++|+||.+|++||+++| ||+||.|.+||||+|+ ......|
T Consensus 371 -----------------------------~~v~~~~~v~~Ia~G~~hs~al~~~G~vy~wG~n~~GqLG~g~~~~~~~~P 421 (473)
T 3of7_A 371 -----------------------------TKLNNVPKFKSVAAGSHHSVAVAQNGIAYSWGFGETYAVGLGPFEDDTEVP 421 (473)
T ss_dssp -----------------------------EECCSSCCEEEEEECSSEEEEEETTSCEEEEECCTTCTTCCCSCCSCEEEE
T ss_pred -----------------------------cccCCCCceEEEEeCCCeEEEEeCCCcEEEeeCCCCCCCCCCCCCccccCC
Confidence 00111126999999999999999999 9999999999999998 6778899
Q ss_pred eeec--ccCCceEEEEecCCCceEEEec
Q psy14091 629 RIIP--ALANIRVVSISAGQYHSLAITS 654 (694)
Q Consensus 629 ~~v~--~l~~~~v~~is~G~~h~~al~~ 654 (694)
++|+ .+.+.+|++|+||.+|++++..
T Consensus 422 ~~v~~~~~~~~~v~~v~cG~~~s~~~~~ 449 (473)
T 3of7_A 422 TRIKNTATQDHNIILVGCGGQFSVSGGV 449 (473)
T ss_dssp EECCCTTTTTEEEEEEEECSSEEEEEEE
T ss_pred eEecccccCCCeEEEEeeCCCeEEEEEe
Confidence 9998 4567789999999999999976
No 8
>3mvd_K Regulator of chromosome condensation; protein-DNA complex, nucleosome core particle (NCP), NCP-CHR factor complex; HET: DNA; 2.90A {Drosophila melanogaster}
Probab=100.00 E-value=6.2e-64 Score=544.36 Aligned_cols=350 Identities=30% Similarity=0.494 Sum_probs=295.1
Q ss_pred cEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCC-CCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCC
Q psy14091 86 DVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLI-DQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWG 163 (694)
Q Consensus 86 ~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~-~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n 163 (694)
++++|+||..|+++|+++| ||+||.|.+||||++.. .....|++++.+.+ |++|+||..|+++|+++|+||+||.|
T Consensus 25 ~~~~ia~g~~~~~~l~~~G~v~~wG~n~~GqLG~g~~~~~~~~p~~v~~l~~--v~~va~G~~h~~~l~~~G~v~~wG~n 102 (423)
T 3mvd_K 25 KRARIAFHLELPKRRTVLGNVLVCGNGDVGQLGLGEDILERKRLSPVAGIPD--AVDISAGGMHNLVLTKSGDIYSFGCN 102 (423)
T ss_dssp ----CCCCCCCCCCCCCCEEEEEEEECTTSTTCSCSSCCEEEEEEECCSCSS--EEEEEECSSEEEEEETTSCEEEEECC
T ss_pred eeeEEecCCccceeecCCCcEEEEeCCCCCCCCCCCCCccCcCCeEccCCCC--ceEEeeCCCeEEEEeCCCeEEEeECC
Confidence 7889999999999999999 99999999999999864 45567888887765 89999999999999999999999999
Q ss_pred CCCCCCCCCCCC--CCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeC--CCCcccCCCCCCCcccceeeccCCC
Q psy14091 164 VHGQLGLNTVED--MSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGS--GIFGQLGTGSNTKHKVPIELYGLPE 239 (694)
Q Consensus 164 ~~gqlg~~~~~~--~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~--n~~gqlg~~~~~~~~~p~~~~~~~~ 239 (694)
.+||||++.... ...|.++... .+|++|+||.+|+++|+++|+||+||. |.+||||.+.......|.++
T Consensus 103 ~~GqLG~~~~~~~~~~~P~~v~~~--~~i~~va~G~~hs~al~~~G~v~~wG~~~n~~GqlG~~~~~~~~~p~~~----- 175 (423)
T 3mvd_K 103 DEGALGRDTSEDGSESKPDLIDLP--GKALCISAGDSHSACLLEDGRVFAWGSFRDSHGNMGLTIDGNKRTPIDL----- 175 (423)
T ss_dssp SSSTTCSCCCSTTSSSSCEECCCS--SCEEEEEECSSEEEEEETTSCEEEEECEECSSSEEESBTTBCEEEEEES-----
T ss_pred CCcCCCCCCcCCccccCCeEEcCC--CCEEEEEcCcCeEEEEeCCCeEEEEeCCCCCCCCcCcCCCCCCceeeEe-----
Confidence 999999988654 5778888743 469999999999999999999999999 99999998766555444333
Q ss_pred CeEEEEEccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCC
Q psy14091 240 PISMIATGYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPS 319 (694)
Q Consensus 240 ~i~~i~~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 319 (694)
T Consensus 176 -------------------------------------------------------------------------------- 175 (423)
T 3mvd_K 176 -------------------------------------------------------------------------------- 175 (423)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccccchhhhccccccccccCCCCccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCc-
Q psy14091 320 SASEKNETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRK- 398 (694)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~- 398 (694)
....+|++|+||..|+++|+++|+||+||.|.+||||.++..
T Consensus 176 -------------------------------------~~~~~i~~va~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~ 218 (423)
T 3mvd_K 176 -------------------------------------MEGTVCCSIASGADHLVILTTAGKVFTVGCAEQGQLGRLSERS 218 (423)
T ss_dssp -------------------------------------STTCCEEEEEECSSEEEEEETTSCEEEEECCTTSTTSSCCTTT
T ss_pred -------------------------------------cCCCcEEEEecCCCeEEEEecCCeEEEeeCCcCCccCCCcccc
Confidence 012369999999999999999999999999999999998653
Q ss_pred ----------CccCCeeEeecccccccccCcCCCCcccCCCeEEEEecCceeEEE-ccCCcEEEEcCCCCCCCCcccccc
Q psy14091 399 ----------EVHTPTAISINIVMTSSEVSSDERSPLLSSSIKHITCGGDFSLAM-DESGKVWAWGTNVQGQVPRYIGEL 467 (694)
Q Consensus 399 ----------~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~ht~al-t~~G~vy~wG~n~~GqLG~~~~~~ 467 (694)
....|+++.+ .....|++|+||.+|++++ +++|+||+||.|.+||||.+....
T Consensus 219 ~~~~~~~~~~~~~~p~~v~~----------------~~~~~v~~i~~g~~~~~~~~~~~g~v~~wG~n~~gqlg~~~~~~ 282 (423)
T 3mvd_K 219 ISGEGRRGKRDLLRPTQLII----------------TRAKPFEAIWATNYCTFMRESQTQVIWATGLNNFKQLAHETKGK 282 (423)
T ss_dssp TTSCSTTTTTTTSSCEEECC----------------TTCCCEEEEEEETTEEEEEETTTCCEEEEEECTTCTTSSCCTTC
T ss_pred cccccccccccccCCeEEee----------------cCCccEEEEEECCcEEEEEECCCCeEEEEeCCCCCcCCCCCCCC
Confidence 3345666543 2346799999999999999 799999999999999999853321
Q ss_pred cccccccCCCCCeeEeeccccCCCcceeeeeecccccceeEeeecCcceeeeeceeeecCCCCccccccccccceeeeee
Q psy14091 468 LFYKFNFDPVGPLVKWIPWFDDSSKKINAITFQSSSASWLLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSI 547 (694)
Q Consensus 468 ~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 547 (694)
. . .+ .|...
T Consensus 283 ~-----------~-~~-----------------------------------~p~~~------------------------ 291 (423)
T 3mvd_K 283 E-----------F-AL-----------------------------------TPIKT------------------------ 291 (423)
T ss_dssp S-----------E-EE-----------------------------------EEEEE------------------------
T ss_pred c-----------e-ee-----------------------------------eeEEc------------------------
Confidence 1 0 00 01000
Q ss_pred cceeeccCCCCcccccccCCcccccccccccccceeeeeeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCCCCCC-C
Q psy14091 548 QGKNVNCENLTPCCLCWWENTLCDKDIVRSHHQMLIMRIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQ-S 625 (694)
Q Consensus 548 ~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g~~~~-~ 625 (694)
...+|++|+||.+|+++|+++| ||+||+|.+||||.++... .
T Consensus 292 ------------------------------------~~~~v~~ia~G~~ht~alt~~G~v~~wG~n~~GqLG~g~~~~~~ 335 (423)
T 3mvd_K 292 ------------------------------------ELKDIRHIAGGQHHTVILTTDLKCSVVGRPEYGRLGLGDVKDVV 335 (423)
T ss_dssp ------------------------------------CCCSEEEEEECSSEEEEEETTCCEEEEECCGGGTTCSSSCCSCE
T ss_pred ------------------------------------CCCCeEEEEcccCeEEEEeCCCcEEEEECCCCCCCCCCCccccc
Confidence 0126899999999999999999 9999999999999997655 4
Q ss_pred CCceeecccCCceEEEEecCCCceEEEecCCcEEEEeCCCCCCCCCCCCCCcCCCeeecc
Q psy14091 626 PHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKA 685 (694)
Q Consensus 626 ~~P~~v~~l~~~~v~~is~G~~h~~al~~dG~v~~WG~n~~GqLG~g~~~~~~~P~~v~~ 685 (694)
..|++++.+.+ +|++|+||.+|++||+++|+||+||+|.+||||+|+..++.+|++|..
T Consensus 336 ~~p~~v~~l~~-~v~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~g~~~~~~~P~~v~~ 394 (423)
T 3mvd_K 336 EKPTIVKKLTE-KIVSVGCGEVCSYAVTIDGKLYSWGSGVNNQLGVGDGDDELEPIVVVS 394 (423)
T ss_dssp EEEEECTTCCS-CEEEEEEETTEEEEEETTSCEEEEECCTTSCSSSSSSCCEEEEEECCS
T ss_pred cCceEeccCCC-CEEEEEcCCCeEEEEcCCCCEEEECCCCCCCCCCCCCCCcccCeEEeC
Confidence 68999998887 899999999999999999999999999999999999999999999985
No 9
>1a12_A RCC1, regulator of chromosome condensation 1; guanine nucleotide exchange factor, GEF, RAN, RAS-like nuclear GTP binding protein; 1.70A {Homo sapiens} SCOP: b.69.5.1 PDB: 1i2m_B
Probab=100.00 E-value=3e-63 Score=536.74 Aligned_cols=354 Identities=27% Similarity=0.480 Sum_probs=289.6
Q ss_pred EEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCC-CCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCC
Q psy14091 89 SVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQ-SPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHG 166 (694)
Q Consensus 89 ~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~-~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~g 166 (694)
+.+.+..|+++|+++| ||+||.|.+||||++.... ...|++++.+ .+|++|+||.+|+++|+++|+||+||.|.+|
T Consensus 12 ~~~~~~~h~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~P~~v~~~--~~i~~va~G~~hs~~l~~~G~v~~wG~n~~G 89 (413)
T 1a12_A 12 SKKVKVSHRSHSTEPGLVLTLGQGDVGQLGLGENVMERKKPALVSIP--EDVVQAEAGGMHTVCLSKSGQVYSFGCNDEG 89 (413)
T ss_dssp -CCCCCCCTTCCCCCBEEEEEEECTTSTTCSCTTCCEEEEEEEECCS--SCEEEEEECSSEEEEEETTSCEEEEECCTTS
T ss_pred hhhhccccceeecCCCcEEEEECCCCCcCCCCCCccccccceEccCC--CCeEEEEeCCCeEEEEcCCCCEEEEECCCCC
Confidence 4556689999999999 9999999999999998654 5678888754 5699999999999999999999999999999
Q ss_pred CCCCCCCC--CCCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeC--CCCcccCCCCCCCc-ccceeeccCCCCe
Q psy14091 167 QLGLNTVE--DMSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGS--GIFGQLGTGSNTKH-KVPIELYGLPEPI 241 (694)
Q Consensus 167 qlg~~~~~--~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~--n~~gqlg~~~~~~~-~~p~~~~~~~~~i 241 (694)
|||.+... ....|.++.. ..+|++|+||.+|+++|+++|+||+||. |.+||||.+..... ..|.++
T Consensus 90 qLG~~~~~~~~~~~P~~v~l--~~~i~~va~G~~hs~alt~~G~v~~wG~~~n~~GqlG~~~~~~~~~~P~~v------- 160 (413)
T 1a12_A 90 ALGRDTSVEGSEMVPGKVEL--QEKVVQVSAGDSHTAALTDDGRVFLWGSFRDNNGVIGLLEPMKKSMVPVQV------- 160 (413)
T ss_dssp TTCSCCCSTTGGGSCEECCC--CSCEEEEEECSSEEEEEETTSCEEEEECEEETTEEEESSBBTBCEEEEEEE-------
T ss_pred CCCCCCCCCccccCCeEecC--CCcEEEEecCCCeEEEEcCCCcEEEeeCCcCCCCccCcCCccccccCCEEe-------
Confidence 99998753 4567888853 2379999999999999999999999999 89999997654321 123322
Q ss_pred EEEEEccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcc
Q psy14091 242 SMIATGYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSA 321 (694)
Q Consensus 242 ~~i~~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 321 (694)
T Consensus 161 -------------------------------------------------------------------------------- 160 (413)
T 1a12_A 161 -------------------------------------------------------------------------------- 160 (413)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cccccchhhhccccccccccCCCCccccCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCcC--
Q psy14091 322 SEKNETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKE-- 399 (694)
Q Consensus 322 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~-- 399 (694)
....+|++|+||..|+++|+++|+||+||.|.+||||.++...
T Consensus 161 -----------------------------------~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~ 205 (413)
T 1a12_A 161 -----------------------------------QLDVPVVKVASGNDHLVMLTADGDLYTLGCGEQGQLGRVPELFAN 205 (413)
T ss_dssp -----------------------------------CCSSCEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSCGGGTSS
T ss_pred -----------------------------------cCCCCEEEEEecCceEEEEcCCCCEEEeeCCCCCccCCCcccccc
Confidence 0123699999999999999999999999999999999875432
Q ss_pred ---------ccCCeeEeecccccccccCcCCCCcccCCCeEEEEecCceeEEEccCCcEEEEcCCCCCCCCccccccccc
Q psy14091 400 ---------VHTPTAISINIVMTSSEVSSDERSPLLSSSIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPRYIGELLFY 470 (694)
Q Consensus 400 ---------~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~~~~~~~~~ 470 (694)
...|+.+.+... ......+|++|+||.+|++||+++|+||+||.|.+||||.+.....
T Consensus 206 ~~~~~~~~~~~~P~~v~~~~~-----------g~~~~~~i~~ia~G~~hs~alt~~G~v~~wG~n~~gqLG~~~~~~~-- 272 (413)
T 1a12_A 206 RGGRQGLERLLVPKCVMLKSR-----------GSRGHVRFQDAFCGAYFTFAISHEGHVYGFGLSNYHQLGTPGTESC-- 272 (413)
T ss_dssp SCGGGGHHHHHSCEECCCBCS-----------SCCSBCCEEEEEEETTEEEEEETTCCEEEEECCTTSTTSCSSCSCE--
T ss_pred ccccccccccccCceEeeccc-----------cccCCccEEEEEeCCCEEEEEeCCCCEEEEeCCCCcCCCCCCCCcc--
Confidence 134444432110 0013467999999999999999999999999999999998754322
Q ss_pred ccccCCCCCeeEeeccccCCCcceeeeeecccccceeEeeecCcceeeeeceeeecCCCCccccccccccceeeeeecce
Q psy14091 471 KFNFDPVGPLVKWIPWFDDSSKKINAITFQSSSASWLLVASYDCSLHIIPVLSIIQNSEPSQSNVAWSLNDITTLSIQGK 550 (694)
Q Consensus 471 ~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 550 (694)
+.|. ++ +.+.
T Consensus 273 ------------~~P~------~v-------------------------~~l~--------------------------- 282 (413)
T 1a12_A 273 ------------FIPQ------NL-------------------------TSFK--------------------------- 282 (413)
T ss_dssp ------------EEEE------EC-------------------------GGGC---------------------------
T ss_pred ------------cccE------Ec-------------------------hhcc---------------------------
Confidence 1110 01 0000
Q ss_pred eeccCCCCcccccccCCcccccccccccccceeeeeeEEEEecCCcEEEEEECCC-EEEeecCCCCcCCCC-CCCCCCCc
Q psy14091 551 NVNCENLTPCCLCWWENTLCDKDIVRSHHQMLIMRIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIG-LIDQSPHP 628 (694)
Q Consensus 551 ~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g-v~~wG~n~~GqLG~g-~~~~~~~P 628 (694)
....+|++|+||.+|+++|+++| ||+||+|.+||||++ +......|
T Consensus 283 --------------------------------~~~~~v~~ia~G~~hs~al~~~G~v~~wG~n~~GqLG~g~~~~~~~~P 330 (413)
T 1a12_A 283 --------------------------------NSTKSWVGFSGGQHHTVCMDSEGKAYSLGRAEYGRLGLGEGAEEKSIP 330 (413)
T ss_dssp --------------------------------CTTCCEEEEEECSSEEEEEETTSCEEEEECCGGGTTCSCTTCCCEEEE
T ss_pred --------------------------------CCCceEEEEecccceEEEEeCCCCEEEeeCCCCCccCCCCCCccccCC
Confidence 00125899999999999999999 999999999999999 55677889
Q ss_pred eeecccCCceEEEEecCCCceEEEecCCcEEEEeCCCCCCCCCCCCCCcCCCeeecc
Q psy14091 629 RIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKA 685 (694)
Q Consensus 629 ~~v~~l~~~~v~~is~G~~h~~al~~dG~v~~WG~n~~GqLG~g~~~~~~~P~~v~~ 685 (694)
++|+.+. +|++|+||.+|++||++||+||+||+|.+||||+|+..++.+|++|+.
T Consensus 331 ~~v~~l~--~v~~v~~G~~hs~alt~~G~v~~wG~n~~gqLG~g~~~~~~~P~~v~~ 385 (413)
T 1a12_A 331 TLISRLP--AVSSVACGASVGYAVTKDGRVFAWGMGTNYQLGTGQDEDAWSPVEMMG 385 (413)
T ss_dssp EECCSSS--SEEEEEECSSEEEEEETTSCEEEEECCTTSTTCSSSCSCEEEEEECCS
T ss_pred EEecccC--ceeEEEECcceEEEEeCCCCEEEecCCCCCCCCCCCCCCcccCeEccc
Confidence 9998887 699999999999999999999999999999999999999999999985
No 10
>3of7_A Regulator of chromosome condensation; beta-propeller, guanine nucleotide exchange factor (GEF), GS histones, nucleus, cell cycle; 1.90A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.4e-62 Score=536.56 Aligned_cols=358 Identities=27% Similarity=0.486 Sum_probs=290.3
Q ss_pred cEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCC---CCCCccEEcCCC--CCCcEEEEEecCceEEEEEcCCcEEE
Q psy14091 86 DVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLI---DQSPHPRIIPAL--ANIRVVSISAGQYHSLAITSQGKLYT 159 (694)
Q Consensus 86 ~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~---~~~~~p~~v~~~--~~~~i~~i~~G~~~s~~lt~~G~v~~ 159 (694)
.|....+...|+++++++| ||+||.|.+||||++.. .....|++++.+ ...+|++|+||..|+++|+++|+||+
T Consensus 11 ~~~~~~~~~~h~~~~~~~g~v~~wG~n~~GqLG~G~~~~~~~~~~P~~~~~~~~~~~~i~~va~G~~Ht~alt~~G~v~~ 90 (473)
T 3of7_A 11 HIINAQEDYKHMYLSVQPLDIFCWGTGSMCELGLGPLAKNKEVKRPRLNPFLPRDEAKIISFAVGGMHTLALDEESNVWS 90 (473)
T ss_dssp TCCCCGGGGHHHHCCSSCCEEEEEEECTTSTTCSCSCGGGGEEEEEEECTTSCTTTTCEEEEEECSSEEEEEETTCCEEE
T ss_pred hhhhhcccccccccCCCCccEEEEcCCCCCccCCCCCcccccccCcccccccccCCCCEEEEEeCCCeEEEEecCCeEEE
Confidence 5677788999999999999 99999999999999984 345678888776 46689999999999999999999999
Q ss_pred EeCCCCCCCCCCCCCC-----------------------CCCCEEecc--c----CCceEEEEEeCCcEEEEEEcCCeEE
Q psy14091 160 WGWGVHGQLGLNTVED-----------------------MSEPQLVKA--L----EHEVIISAKGGHAHSIALTKAGRVW 210 (694)
Q Consensus 160 wG~n~~gqlg~~~~~~-----------------------~~~p~~v~~--~----~~~~i~~i~~G~~~~~~lt~~G~v~ 210 (694)
||.|.+||||.+.... ...|.+++. + ...+|++|+||.+|+++|+++|+||
T Consensus 91 wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~l~~~~~~~~i~~va~G~~hs~alt~~G~vy 170 (473)
T 3of7_A 91 WGCNDVGALGRDTSNAKEQLKDMDADDSSDDEDGDLNELESTPAKIPRESFPPLAEGHKVVQLAATDNMSCALFSNGEVY 170 (473)
T ss_dssp EECCTTSTTCSCCC---------------------CCHHHHSCEECCGGGCHHHHTTCCEEEEEECSSEEEEEETTSCEE
T ss_pred eECCCCCCCCCCCcccccccccccccccCccccccccccccCceecccccCCcccCCCcEEEEEccCCEEEEEeCCCeEE
Confidence 9999999999987554 457888875 4 3578999999999999999999999
Q ss_pred EEeC--CCCcccCCCCCC--CcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhhhhcc
Q psy14091 211 AFGS--GIFGQLGTGSNT--KHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYS 286 (694)
Q Consensus 211 ~wG~--n~~gqlg~~~~~--~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~ 286 (694)
+||. +.+||||.+... ....|.++..+
T Consensus 171 ~wG~n~~~~GqLG~~~~~~~~~~~P~~v~~l------------------------------------------------- 201 (473)
T 3of7_A 171 AWGTFRCNEGILGFYQDKIKIQKTPWKVPTF------------------------------------------------- 201 (473)
T ss_dssp EEECEEETTEEEESBTTTBSCEEEEEECCCC-------------------------------------------------
T ss_pred EeeCCcCCCCccCCCCCCCccccCcEEcccc-------------------------------------------------
Confidence 9998 678999975432 23334433111
Q ss_pred cccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccccccccccCCCCccccCeeeeccCCCCCeEEEE
Q psy14091 287 NQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPILQIC 366 (694)
Q Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~ 366 (694)
...+|++|+
T Consensus 202 -----------------------------------------------------------------------~~~~i~~va 210 (473)
T 3of7_A 202 -----------------------------------------------------------------------SKYNIVQLA 210 (473)
T ss_dssp -----------------------------------------------------------------------CSSCEEEEE
T ss_pred -----------------------------------------------------------------------CCCCEEEEE
Confidence 123699999
Q ss_pred ecCceeEEEeCCccEEEEeCCCCCcCCCCCCcC----ccCCeeEeecccccccccCcCCCCcccCCCeEEEEecCceeEE
Q psy14091 367 CGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKE----VHTPTAISINIVMTSSEVSSDERSPLLSSSIKHITCGGDFSLA 442 (694)
Q Consensus 367 ~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~----~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~ht~a 442 (694)
||..|++||+++|+||+||.|.+||||.+.... ...|.++. ..+|++|+||.+|++|
T Consensus 211 ~G~~hs~alt~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~p~~~~-------------------~~~v~~Ia~G~~hs~a 271 (473)
T 3of7_A 211 PGKDHILFLDEEGMVFAWGNGQQNQLGRKVMERFRLKTLDPRPFG-------------------LRHVKYIASGENHCFA 271 (473)
T ss_dssp ECSSEEEEEETTSCEEEEECCTTSTTSSCCCGGGTTTTCSCEECS-------------------CCSEEEEEECSSEEEE
T ss_pred ecCCeEEEEeCCCeEEEEeCCCCCCCCCCccccccccccCceecC-------------------CcceEEEecCCCeEEE
Confidence 999999999999999999999999999987644 23344331 2579999999999999
Q ss_pred EccCCcEEEEcCCCCCCCCcccccccccccccCCCCCeeEeeccccCCCcceeeeeecccccceeEeeecCcceeeeece
Q psy14091 443 MDESGKVWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKWIPWFDDSSKKINAITFQSSSASWLLVASYDCSLHIIPVL 522 (694)
Q Consensus 443 lt~~G~vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 522 (694)
|+++|+||+||.|.+||||.+..... ... ...| .+|
T Consensus 272 lt~~G~v~~wG~n~~GqlG~~~~~~~---------~~~-~~~P------~~v---------------------------- 307 (473)
T 3of7_A 272 LTKDNKLVSWGLNQFGQCGVSEDVED---------GAL-VTKP------KRL---------------------------- 307 (473)
T ss_dssp EETTSCEEEEEECTTSTTCCCSCCCT---------TCE-EEEE------EEC----------------------------
T ss_pred EecCCCEEEeCCCCCCCcCCCCcccC---------Cce-eecc------ccc----------------------------
Confidence 99999999999999999998753211 000 0011 000
Q ss_pred eeecCCCCccccccccccceeeeeecceeeccCCCCcccccccCCcccccccccccccceeeeeeEEEEecCCcEEEEEE
Q psy14091 523 SIIQNSEPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLCWWENTLCDKDIVRSHHQMLIMRIDVSSVACGRLHTLVLT 602 (694)
Q Consensus 523 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~ 602 (694)
......+|++|+||..|+++|+
T Consensus 308 ----------------------------------------------------------~~~~~~~i~~ia~G~~hs~~lt 329 (473)
T 3of7_A 308 ----------------------------------------------------------ALPDNVVIRSIAAGEHHSLILS 329 (473)
T ss_dssp ----------------------------------------------------------CCCTTCCEEEEEECSSEEEEEE
T ss_pred ----------------------------------------------------------cccCCccEEEEEeCCCeEEEEe
Confidence 0001136999999999999999
Q ss_pred CCC-EEEeecCCCCcCCCCCCC--------------CCCCceeecccCCceEEEEecCCCceEEEecCCcEEEEeCCCCC
Q psy14091 603 SSG-VYAWGSSQYGQLGIGLID--------------QSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHG 667 (694)
Q Consensus 603 ~~g-v~~wG~n~~GqLG~g~~~--------------~~~~P~~v~~l~~~~v~~is~G~~h~~al~~dG~v~~WG~n~~G 667 (694)
++| ||+||+|.+||||++... ....|..++.+. +|++|+||.+|++||+++|+||+||+|.+|
T Consensus 330 ~~G~v~~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~P~~v~~~~--~v~~Ia~G~~hs~al~~~G~vy~wG~n~~G 407 (473)
T 3of7_A 330 QDGDLYSCGRLDMFEVGIPKDNLPEYTYKDVHGKARAVPLPTKLNNVP--KFKSVAAGSHHSVAVAQNGIAYSWGFGETY 407 (473)
T ss_dssp TTSCEEEEEECTTCTTCCCGGGCCTTCEECTTSCEEEEEEEEECCSSC--CEEEEEECSSEEEEEETTSCEEEEECCTTC
T ss_pred CCCeEEEEECCCCCccCCCccccccccccccCCceeeeccCcccCCCC--ceEEEEeCCCeEEEEeCCCcEEEeeCCCCC
Confidence 999 999999999999987431 124577776554 599999999999999999999999999999
Q ss_pred CCCCCC-CCCcCCCeeeccc
Q psy14091 668 QLGLNT-VEDMSEPQLVKAL 686 (694)
Q Consensus 668 qLG~g~-~~~~~~P~~v~~~ 686 (694)
|||+|+ ..++.+|++|+.+
T Consensus 408 qLG~g~~~~~~~~P~~v~~~ 427 (473)
T 3of7_A 408 AVGLGPFEDDTEVPTRIKNT 427 (473)
T ss_dssp TTCCCSCCSCEEEEEECCCT
T ss_pred CCCCCCCCccccCCeEeccc
Confidence 999999 7899999999843
No 11
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=100.00 E-value=1.7e-51 Score=418.62 Aligned_cols=272 Identities=32% Similarity=0.471 Sum_probs=220.6
Q ss_pred eEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccE
Q psy14091 50 RVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPR 128 (694)
Q Consensus 50 ~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~ 128 (694)
+||+||.|...++. +.+++.+ .+|++|+||..|+++|+ +| ||+||.|.+||||. |.
T Consensus 3 ~v~~WG~n~~~~~~----------~~p~~~~----~~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~--------p~ 59 (282)
T 3qhy_B 3 SVVAWGGNNDWGEA----------TVPAEAQ----SGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTM--------PA 59 (282)
T ss_dssp EEEEECSCCTTSTT----------CCCGGGS----SSCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSC--------CG
T ss_pred EEEEeCCCCCcCcc----------cCCcccc----CCCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCC--------Cc
Confidence 69999998755442 1122212 27999999999999998 99 99999999999995 22
Q ss_pred EcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCCcEEEEEEcCCe
Q psy14091 129 IIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGHAHSIALTKAGR 208 (694)
Q Consensus 129 ~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~ 208 (694)
. ...+|++|+||.+|+++|+ +|+||+||.|.+||||. |.++ ..+|++|+||.+|+++|+ +|+
T Consensus 60 ~----~~~~i~~ia~G~~hs~~l~-~G~v~~wG~n~~Gqlg~--------P~~~----~~~v~~ia~G~~hs~al~-~G~ 121 (282)
T 3qhy_B 60 A----TQSGVDAIAAGNYHSLALK-DGEVIAWGGNEDGQTTV--------PAEA----RSGVDAIAAGAWASYALK-DGK 121 (282)
T ss_dssp G----GGSCCCEEEECSSEEEEEE-TTEEEEEECCTTSTTCC--------CGGG----SSSEEEEEEETTEEEEEE-TTE
T ss_pred c----CCCCEEEEEeCCCEEEEEE-CCEEEEeeCCCCCCCCC--------Cccc----CCCeEEEECcCCEEEEEe-CCe
Confidence 1 1236999999999999996 99999999999999985 2222 236999999999999999 999
Q ss_pred EEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhhhhcccc
Q psy14091 209 VWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQ 288 (694)
Q Consensus 209 v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~ 288 (694)
||+||.|.+||||. |..
T Consensus 122 v~~wG~n~~gqlg~--------~~~------------------------------------------------------- 138 (282)
T 3qhy_B 122 VIAWGDDSDGQTTV--------PAE------------------------------------------------------- 138 (282)
T ss_dssp EEEEECCTTSTTSC--------CGG-------------------------------------------------------
T ss_pred EEEecCCCCCcCCC--------Ccc-------------------------------------------------------
Confidence 99999999999872 100
Q ss_pred cccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccccccccccCCCCccccCeeeeccCCCCCeEEEEec
Q psy14091 289 VKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPILQICCG 368 (694)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~G 368 (694)
...+|++|+||
T Consensus 139 ---------------------------------------------------------------------~~~~i~~i~~G 149 (282)
T 3qhy_B 139 ---------------------------------------------------------------------AQSGVTALDGG 149 (282)
T ss_dssp ---------------------------------------------------------------------GGSSEEEEEEC
T ss_pred ---------------------------------------------------------------------CCCCeEEEEcc
Confidence 01358999999
Q ss_pred CceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccccccccCcCCCCcccCCCeEEEEecCceeEEEccCCc
Q psy14091 369 CHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVMTSSEVSSDERSPLLSSSIKHITCGGDFSLAMDESGK 448 (694)
Q Consensus 369 ~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~ht~alt~~G~ 448 (694)
..|+++|+ +|+||+||.|.+||||. |.+ ...+|++|+||.+|+++| ++|+
T Consensus 150 ~~~~~~l~-~G~v~~wG~n~~gqlg~--------p~~--------------------~~~~v~~i~~G~~hs~al-~~G~ 199 (282)
T 3qhy_B 150 VYTALAVK-NGGVIAWGDNYFGQTTV--------PAE--------------------AQSGVDDVAGGIFHSLAL-KDGK 199 (282)
T ss_dssp SSEEEEEE-TTEEEEEECCTTSTTSC--------CGG--------------------GGSSEEEEEECSSEEEEE-ETTE
T ss_pred cCEEEEEE-CCEEEEecCCCCCCCCC--------cee--------------------cCCCeEEEEecCCEEEEE-ECCe
Confidence 99999999 89999999999999982 221 235799999999999999 8999
Q ss_pred EEEEcCCCCCCCCcccccccccccccCCCCCeeEeeccccCCCcceeeeeecccccceeEeeecCcceeeeeceeeecCC
Q psy14091 449 VWAWGTNVQGQVPRYIGELLFYKFNFDPVGPLVKWIPWFDDSSKKINAITFQSSSASWLLVASYDCSLHIIPVLSIIQNS 528 (694)
Q Consensus 449 vy~wG~n~~GqLG~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 528 (694)
||+||.|.+||||.+...
T Consensus 200 v~~wG~n~~gqlg~p~~~-------------------------------------------------------------- 217 (282)
T 3qhy_B 200 VIAWGDNRYKQTTVPTEA-------------------------------------------------------------- 217 (282)
T ss_dssp EEEEECCTTSTTCCCGGG--------------------------------------------------------------
T ss_pred EEEEECCCCCCCCCCccc--------------------------------------------------------------
Confidence 999999999999853210
Q ss_pred CCccccccccccceeeeeecceeeccCCCCcccccccCCcccccccccccccceeeeeeEEEEecCCcEEEEEECCC-EE
Q psy14091 529 EPSQSNVAWSLNDITTLSIQGKNVNCENLTPCCLCWWENTLCDKDIVRSHHQMLIMRIDVSSVACGRLHTLVLTSSG-VY 607 (694)
Q Consensus 529 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~G~~h~~~l~~~g-v~ 607 (694)
..+|++|+||..|+++|+ +| +|
T Consensus 218 --------------------------------------------------------~~~v~~i~~G~~h~~al~-~g~v~ 240 (282)
T 3qhy_B 218 --------------------------------------------------------LSGVSAIASGEWYSLALK-NGKVI 240 (282)
T ss_dssp --------------------------------------------------------GSSCCEEEECSSCEEEEE-TTEEE
T ss_pred --------------------------------------------------------CCCceEEEcCCCEEEEEE-CCEEE
Confidence 014789999999999999 99 99
Q ss_pred EeecCCCCcCCCCCCCCCCCceeecccCCceEEEEecCCCceEEEecCCcEE
Q psy14091 608 AWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLY 659 (694)
Q Consensus 608 ~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~is~G~~h~~al~~dG~v~ 659 (694)
+||.|.+||++.. ..|++|+||..|++||+++++.+
T Consensus 241 ~wG~n~~gq~~v~----------------~~v~~iaaG~~h~~al~~~~~~~ 276 (282)
T 3qhy_B 241 AWGSSRTAPSSVQ----------------SGVSSIEAGPNAAYALKGGSGSG 276 (282)
T ss_dssp EESTTCCCCGGGS----------------SCEEEEEECSSCEEEEEC-----
T ss_pred EecCCCCccccCC----------------CCcEEEEECcCeEEEEecCCCCC
Confidence 9999999998752 15999999999999999998765
No 12
>3qhy_B Beta-lactamase inhibitory protein II; enyzme-inhibitor complex, beta-propeller, protein:protein interaction; 2.06A {Streptomyces exfoliatus} PDB: 3qi0_A 1jtd_B
Probab=100.00 E-value=1.1e-47 Score=390.67 Aligned_cols=227 Identities=31% Similarity=0.549 Sum_probs=185.7
Q ss_pred CCeEEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eEEE
Q psy14091 31 IPEVPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VYAW 108 (694)
Q Consensus 31 ~~i~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy~w 108 (694)
.+|++|++|..| ++|+ +|+||+||.|.+||||.+. .. ..+|++|+||..|+++|+ +| ||+|
T Consensus 24 ~~i~~ia~G~~h~~~l~-~G~v~~wG~n~~Gqlg~p~---------~~------~~~i~~ia~G~~hs~~l~-~G~v~~w 86 (282)
T 3qhy_B 24 SGVDAIAGGYFHGLALK-GGKVLGWGANLNGQLTMPA---------AT------QSGVDAIAAGNYHSLALK-DGEVIAW 86 (282)
T ss_dssp SSCCEEEECSSEEEEEE-TTEEEEEECCSSSTTSCCG---------GG------GSCCCEEEECSSEEEEEE-TTEEEEE
T ss_pred CCCcEEEeCCCeEEEEE-CCEEEEEeCCCCCCCCCCc---------cC------CCCEEEEEeCCCEEEEEE-CCEEEEe
Confidence 379999999999 7887 9999999999999998531 11 127999999999999996 99 9999
Q ss_pred eCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCc
Q psy14091 109 GSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHE 188 (694)
Q Consensus 109 G~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~ 188 (694)
|.|.+||||. |..+ ..+|++|+||.+|+++|+ +|+||+||.|.+||||... . ...
T Consensus 87 G~n~~Gqlg~--------P~~~----~~~v~~ia~G~~hs~al~-~G~v~~wG~n~~gqlg~~~----------~--~~~ 141 (282)
T 3qhy_B 87 GGNEDGQTTV--------PAEA----RSGVDAIAAGAWASYALK-DGKVIAWGDDSDGQTTVPA----------E--AQS 141 (282)
T ss_dssp ECCTTSTTCC--------CGGG----SSSEEEEEEETTEEEEEE-TTEEEEEECCTTSTTSCCG----------G--GGS
T ss_pred eCCCCCCCCC--------Cccc----CCCeEEEECcCCEEEEEe-CCeEEEecCCCCCcCCCCc----------c--CCC
Confidence 9999999985 4333 246999999999999999 9999999999999998422 1 224
Q ss_pred eEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCCCc
Q psy14091 189 VIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSSPQ 268 (694)
Q Consensus 189 ~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~~~ 268 (694)
+|++|+||.+|+++|+ +|+||+||.|.+|||+. |..+
T Consensus 142 ~i~~i~~G~~~~~~l~-~G~v~~wG~n~~gqlg~--------p~~~---------------------------------- 178 (282)
T 3qhy_B 142 GVTALDGGVYTALAVK-NGGVIAWGDNYFGQTTV--------PAEA---------------------------------- 178 (282)
T ss_dssp SEEEEEECSSEEEEEE-TTEEEEEECCTTSTTSC--------CGGG----------------------------------
T ss_pred CeEEEEcccCEEEEEE-CCEEEEecCCCCCCCCC--------ceec----------------------------------
Confidence 5999999999999999 89999999999999972 1111
Q ss_pred ccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCcccccccchhhhccccccccccCCCCccc
Q psy14091 269 VLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEKNETAEYASFMQSFLSSADDGMAHM 348 (694)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 348 (694)
T Consensus 179 -------------------------------------------------------------------------------- 178 (282)
T 3qhy_B 179 -------------------------------------------------------------------------------- 178 (282)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCeeeeccCCCCCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccccccccCcCCCCcccCC
Q psy14091 349 SPTLVDTSHVKAPILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVMTSSEVSSDERSPLLSS 428 (694)
Q Consensus 349 ~p~~v~~~~~~~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~ 428 (694)
..+|++|+||..|+++| ++|+||+||.|.+||||.. . ....
T Consensus 179 ----------~~~v~~i~~G~~hs~al-~~G~v~~wG~n~~gqlg~p--------~--------------------~~~~ 219 (282)
T 3qhy_B 179 ----------QSGVDDVAGGIFHSLAL-KDGKVIAWGDNRYKQTTVP--------T--------------------EALS 219 (282)
T ss_dssp ----------GSSEEEEEECSSEEEEE-ETTEEEEEECCTTSTTCCC--------G--------------------GGGS
T ss_pred ----------CCCeEEEEecCCEEEEE-ECCeEEEEECCCCCCCCCC--------c--------------------ccCC
Confidence 12588888888888888 7888888888888888732 1 1124
Q ss_pred CeEEEEecCceeEEEccCCcEEEEcCCCCCCCCc
Q psy14091 429 SIKHITCGGDFSLAMDESGKVWAWGTNVQGQVPR 462 (694)
Q Consensus 429 ~i~~Ia~G~~ht~alt~~G~vy~wG~n~~GqLG~ 462 (694)
+|++|+||.+|+++|+ +|+||+||.|.++|++.
T Consensus 220 ~v~~i~~G~~h~~al~-~g~v~~wG~n~~gq~~v 252 (282)
T 3qhy_B 220 GVSAIASGEWYSLALK-NGKVIAWGSSRTAPSSV 252 (282)
T ss_dssp SCCEEEECSSCEEEEE-TTEEEEESTTCCCCGGG
T ss_pred CceEEEcCCCEEEEEE-CCEEEEecCCCCccccC
Confidence 5888888888888888 88888888888887763
No 13
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.34 E-value=1.3 Score=46.49 Aligned_cols=148 Identities=8% Similarity=0.049 Sum_probs=85.3
Q ss_pred cEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCC
Q psy14091 86 DVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGV 164 (694)
Q Consensus 86 ~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~ 164 (694)
.|..++......+.-..|| |..|=...... ..+.....-....|..++......+.-..||.|..|-...
T Consensus 215 ~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~---------~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~ 285 (435)
T 1p22_A 215 AVLHLRFNNGMMVTCSKDRSIAVWDMASPTD---------ITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTST 285 (435)
T ss_dssp CEEEEECCTTEEEEEETTSCEEEEECSSSSC---------CEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTT
T ss_pred cEEEEEEcCCEEEEeeCCCcEEEEeCCCCCC---------ceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCc
Confidence 4555555555555555666 66664322110 0111111112335777777777777888899999996432
Q ss_pred CCCCCCCCCCCCCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEE
Q psy14091 165 HGQLGLNTVEDMSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMI 244 (694)
Q Consensus 165 ~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i 244 (694)
.. ....+.. ....|..++......+.-..||.|..|-... ++ ....+..-...|..+
T Consensus 286 ~~-----------~~~~~~~-~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~~-~~----------~~~~~~~h~~~v~~~ 342 (435)
T 1p22_A 286 CE-----------FVRTLNG-HKRGIACLQYRDRLVVSGSSDNTIRLWDIEC-GA----------CLRVLEGHEELVRCI 342 (435)
T ss_dssp CC-----------EEEEEEC-CSSCEEEEEEETTEEEEEETTSCEEEEETTT-CC----------EEEEECCCSSCEEEE
T ss_pred Cc-----------EEEEEcC-CCCcEEEEEeCCCEEEEEeCCCeEEEEECCC-CC----------EEEEEeCCcCcEEEE
Confidence 10 1111211 2234677777677777778899999995432 11 111222334567888
Q ss_pred EEccCeEEEEecCCcEEEecC
Q psy14091 245 ATGYFHNLALGTSNRLYTWGS 265 (694)
Q Consensus 245 ~~g~~~~~~l~~~g~v~~wG~ 265 (694)
+......+.-..+|.|.+|-.
T Consensus 343 ~~~~~~l~sg~~dg~i~vwd~ 363 (435)
T 1p22_A 343 RFDNKRIVSGAYDGKIKVWDL 363 (435)
T ss_dssp ECCSSEEEEEETTSCEEEEEH
T ss_pred EecCCEEEEEeCCCcEEEEEC
Confidence 877777777788999999964
No 14
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=96.10 E-value=1.7 Score=45.62 Aligned_cols=183 Identities=8% Similarity=0.000 Sum_probs=108.8
Q ss_pred EEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eEEEeCC
Q psy14091 34 VPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VYAWGSS 111 (694)
Q Consensus 34 ~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy~wG~n 111 (694)
..++.-... +.-..||.|..|-.... ..+..+......|..++......+.-..|| |..|-..
T Consensus 123 ~~~~~~g~~l~sg~~dg~i~vwd~~~~---------------~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~ 187 (445)
T 2ovr_B 123 TCLQFCGNRIVSGSDDNTLKVWSAVTG---------------KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAE 187 (445)
T ss_dssp EEEEEETTEEEEEETTSCEEEEETTTC---------------CEEEECCCCSSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred EEEEEcCCEEEEEECCCcEEEEECCCC---------------cEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEEEECC
Confidence 334333333 55567899999965321 122223333346777777677777778889 9888643
Q ss_pred CCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEE
Q psy14091 112 QYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVII 191 (694)
Q Consensus 112 ~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~ 191 (694)
.. + ....+. .....|..++......+.-..||.|+.|-..... ....+. .....|.
T Consensus 188 ~~-~----------~~~~~~-~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~-----------~~~~~~-~~~~~v~ 243 (445)
T 2ovr_B 188 TG-E----------CIHTLY-GHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQ-----------CLHVLM-GHVAAVR 243 (445)
T ss_dssp TT-E----------EEEEEC-CCSSCEEEEEEETTEEEEEETTSEEEEEESSSCC-----------EEEEEE-CCSSCEE
T ss_pred cC-c----------EEEEEC-CCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCc-----------EEEEEc-CCcccEE
Confidence 21 1 011111 1223477777777777888899999999643211 011111 1233467
Q ss_pred EEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 192 SAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 192 ~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
.++......+.-..+|.|..|-.... .....+......|..+.....+.+.-..+|.|.+|-..
T Consensus 244 ~~~~~~~~l~~~~~dg~i~iwd~~~~-----------~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~ 307 (445)
T 2ovr_B 244 CVQYDGRRVVSGAYDFMVKVWDPETE-----------TCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVE 307 (445)
T ss_dssp EEEECSSCEEEEETTSCEEEEEGGGT-----------EEEEEECCCSSCEEEEEECSSEEEEEETTSCEEEEETT
T ss_pred EEEECCCEEEEEcCCCEEEEEECCCC-----------cEeEEecCCCCceEEEEECCCEEEEEeCCCeEEEEECC
Confidence 77776777777788999999953211 11112223345688888877777777889999999754
No 15
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=95.89 E-value=2.1 Score=44.82 Aligned_cols=188 Identities=9% Similarity=0.050 Sum_probs=114.4
Q ss_pred CeEEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eEEEe
Q psy14091 32 PEVPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VYAWG 109 (694)
Q Consensus 32 ~i~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy~wG 109 (694)
.|..++..... +....||.|..|-... ...+..+......|..++......+.-..|| |..|-
T Consensus 135 ~v~~~~~d~~~l~~g~~dg~i~iwd~~~---------------~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd 199 (435)
T 1p22_A 135 GVYCLQYDDQKIVSGLRDNTIKIWDKNT---------------LECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWD 199 (435)
T ss_dssp CEEEEECCSSEEEEEESSSCEEEEESSS---------------CCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEE
T ss_pred cEEEEEECCCEEEEEeCCCeEEEEeCCC---------------CeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEE
Confidence 35556554445 5556799999995432 1222333334447888888666677778889 98886
Q ss_pred CCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCce
Q psy14091 110 SSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEV 189 (694)
Q Consensus 110 ~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~ 189 (694)
....-. ...+. .....|..++......+.-..||.|..|-...... ........-....
T Consensus 200 ~~~~~~-----------~~~~~-~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~---------~~~~~~~~~~~~~ 258 (435)
T 1p22_A 200 VNTGEM-----------LNTLI-HHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTD---------ITLRRVLVGHRAA 258 (435)
T ss_dssp SSSCCE-----------EEEEC-CCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSC---------CEEEEEECCCSSC
T ss_pred CCCCcE-----------EEEEc-CCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCC---------ceeeeEecCCCCc
Confidence 533111 11111 12335788887777778888999999996432111 0111111112345
Q ss_pred EEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 190 IISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 190 i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
|..++....+.+.-..||.|..|-.... .....+......|..++......+.-..+|.|.+|-..
T Consensus 259 v~~~~~~~~~l~s~~~dg~i~vwd~~~~-----------~~~~~~~~~~~~v~~~~~~~~~l~~g~~dg~i~iwd~~ 324 (435)
T 1p22_A 259 VNVVDFDDKYIVSASGDRTIKVWNTSTC-----------EFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIE 324 (435)
T ss_dssp EEEEEEETTEEEEEETTSEEEEEETTTC-----------CEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred EEEEEeCCCEEEEEeCCCeEEEEECCcC-----------cEEEEEcCCCCcEEEEEeCCCEEEEEeCCCeEEEEECC
Confidence 7777777777777888999999954321 11112223345677787777777777899999999754
No 16
>4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz}
Probab=95.42 E-value=0.027 Score=52.78 Aligned_cols=69 Identities=19% Similarity=0.281 Sum_probs=54.9
Q ss_pred CCeEEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCCeEEEEeCCC-eEEE
Q psy14091 31 IPEVPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRLHTLVLTSSG-VYAW 108 (694)
Q Consensus 31 ~~i~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~h~~~l~~~G-vy~w 108 (694)
..+.+|+.-+.| +++.-|+++|+||++++||+-..... ....++.+|.++++-+..-. +--|
T Consensus 309 n~i~~VsG~y~H~vvi~gd~el~sFG~~sNGQ~~ip~ta----------------gPfla~~AG~~fTVTVn~~nyv~FW 372 (400)
T 4gbf_A 309 NPIGGVSGLYTHYTVMYGDGQIAFFGNNDNGQCDVDDHA----------------GPYIQLAAGHNFTVTVNTLNQVMFW 372 (400)
T ss_dssp SCCCCCBCSSSEEEC-CTTTCCCEEECCTTSTTCCCGGG----------------CCEEEEEECSSEEEEEETTCCEEEE
T ss_pred CccccccccccceEEEecCceeEEeccCCCCceecCCCc----------------chHHhHhccCCeEEEEeceeeEEEe
Confidence 457788888889 66667999999999999998443321 15789999999999999999 9999
Q ss_pred eCCCCCc
Q psy14091 109 GSSQYGQ 115 (694)
Q Consensus 109 G~n~~gq 115 (694)
|+.-..-
T Consensus 373 GDSPDNS 379 (400)
T 4gbf_A 373 GDSPDNS 379 (400)
T ss_dssp ECCTTST
T ss_pred cCCCCcc
Confidence 9865443
No 17
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=95.08 E-value=1.9 Score=48.27 Aligned_cols=108 Identities=20% Similarity=0.168 Sum_probs=50.5
Q ss_pred EEEEEe-CCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEE---E---EeCCCeEEEEeCCC-eEEEeCCCC
Q psy14091 42 HVALVR-NRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSS---V---ACGRLHTLVLTSSG-VYAWGSSQY 113 (694)
Q Consensus 42 ~~~l~~-~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~---v---~~G~~h~~~l~~~G-vy~wG~n~~ 113 (694)
++++.. +|+||++|-......|.... ....+..+.....++.. . .....+++++..+| +|.+|-...
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~-----~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~ 264 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPG-----GITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDA 264 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCC-----SEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSST
T ss_pred eEEEEecCCEEEEEecccccccccCCC-----CeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCC
Confidence 455554 99999998654333221110 00112222222112222 2 12234456777889 999996432
Q ss_pred CccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeC
Q psy14091 114 GQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGW 162 (694)
Q Consensus 114 gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~ 162 (694)
..+-.=+. ....-..+..+.. .-..|++++..+|+||++|-
T Consensus 265 ~~v~~yd~-~t~~W~~~~~~~~-------~R~~~s~~~~~dg~iyv~GG 305 (656)
T 1k3i_A 265 KKTSLYDS-SSDSWIPGPDMQV-------ARGYQSSATMSDGRVFTIGG 305 (656)
T ss_dssp TCEEEEEG-GGTEEEECCCCSS-------CCSSCEEEECTTSCEEEECC
T ss_pred CceEEecC-cCCceeECCCCCc-------cccccceEEecCCeEEEEeC
Confidence 21000000 0001111111111 22467877777999999995
No 18
>4gbf_A Phikz131; 7-bladed beta-propeller, possibly participates in binding of phage to the HOST cell, viral protein; 1.95A {Pseudomonas phage phikz}
Probab=95.01 E-value=0.043 Score=51.51 Aligned_cols=72 Identities=18% Similarity=0.369 Sum_probs=60.0
Q ss_pred CCeEEEEecCceeEEEeCCccEEEEeCCCCCcCCCCCCcCccCCeeEeecccccccccCcCCCCcccCCCeEEEEecCce
Q psy14091 360 APILQICCGCHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVHTPTAISINIVMTSSEVSSDERSPLLSSSIKHITCGGDF 439 (694)
Q Consensus 360 ~~i~~I~~G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~h 439 (694)
..|.+|+....|++++--+++|+.+|.++.||+-.. .......++++|.++
T Consensus 309 n~i~~VsG~y~H~vvi~gd~el~sFG~~sNGQ~~ip-----------------------------~tagPfla~~AG~~f 359 (400)
T 4gbf_A 309 NPIGGVSGLYTHYTVMYGDGQIAFFGNNDNGQCDVD-----------------------------DHAGPYIQLAAGHNF 359 (400)
T ss_dssp SCCCCCBCSSSEEEC-CTTTCCCEEECCTTSTTCCC-----------------------------GGGCCEEEEEECSSE
T ss_pred CccccccccccceEEEecCceeEEeccCCCCceecC-----------------------------CCcchHHhHhccCCe
Confidence 467888989999999999999999999999999421 234568899999999
Q ss_pred eEEEccCCcEEEEcCCCCCCC
Q psy14091 440 SLAMDESGKVWAWGTNVQGQV 460 (694)
Q Consensus 440 t~alt~~G~vy~wG~n~~GqL 460 (694)
++-+..-..+-.||+.....|
T Consensus 360 TVTVn~~nyv~FWGDSPDNSL 380 (400)
T 4gbf_A 360 TVTVNTLNQVMFWGDSPDNSL 380 (400)
T ss_dssp EEEEETTCCEEEEECCTTSTT
T ss_pred EEEEeceeeEEEecCCCCcce
Confidence 999999999999998655543
No 19
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.12 E-value=6.5 Score=41.04 Aligned_cols=106 Identities=8% Similarity=0.049 Sum_probs=66.6
Q ss_pred EEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCC
Q psy14091 138 VVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIF 217 (694)
Q Consensus 138 i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~ 217 (694)
+..++......+.-..||.|..|-...... ...+.. ....|..++......+.-..||.|..|-....
T Consensus 122 ~~~~~~~g~~l~sg~~dg~i~vwd~~~~~~-----------~~~~~~-h~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~ 189 (445)
T 2ovr_B 122 ITCLQFCGNRIVSGSDDNTLKVWSAVTGKC-----------LRTLVG-HTGGVWSSQMRDNIIISGSTDRTLKVWNAETG 189 (445)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTCCE-----------EEECCC-CSSCEEEEEEETTEEEEEETTSCEEEEETTTT
T ss_pred EEEEEEcCCEEEEEECCCcEEEEECCCCcE-----------EEEEcC-CCCCEEEEEecCCEEEEEeCCCeEEEEECCcC
Confidence 455666666677778899999996432111 011111 12346666666677777788999999954321
Q ss_pred cccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 218 GQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 218 gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
.....+..-...|..++......+.-..+|.|+.|-..
T Consensus 190 -----------~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~ 227 (445)
T 2ovr_B 190 -----------ECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIE 227 (445)
T ss_dssp -----------EEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESS
T ss_pred -----------cEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECC
Confidence 11122223345688888777787888899999999654
No 20
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=93.32 E-value=8.2 Score=43.42 Aligned_cols=143 Identities=13% Similarity=0.118 Sum_probs=68.8
Q ss_pred EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEE-e---------CCCeEEEEeC-CC-eEEEeC
Q psy14091 43 VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVA-C---------GRLHTLVLTS-SG-VYAWGS 110 (694)
Q Consensus 43 ~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~-~---------G~~h~~~l~~-~G-vy~wG~ 110 (694)
.+...+++||++|-... ... ..+..+......+..+. . -..|+++... +| +|.+|-
T Consensus 392 ~~~~~~~~iyv~GG~~~---------~~~---~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG 459 (695)
T 2zwa_A 392 DVDVAGNDVFYMGGSNP---------YRV---NEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGG 459 (695)
T ss_dssp EEEECSSCEEEECCBSS---------SBC---CCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECC
T ss_pred EEEEECCEEEEECCCCC---------CCc---CcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcC
Confidence 33447899999995321 000 11222222233555555 1 1378888876 77 999995
Q ss_pred CCCCccCCCCCCCCCccEEcCCCCCCcEEEE----EecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccC
Q psy14091 111 SQYGQLGIGLIDQSPHPRIIPALANIRVVSI----SAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALE 186 (694)
Q Consensus 111 n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i----~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~ 186 (694)
.....- ...+.. ... +.......+ ..-..|++++-.+|+||++|-..... -..+-.+.
T Consensus 460 ~~~~~~---~~~dv~---~yd-~~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~-----------~v~~yd~~ 521 (695)
T 2zwa_A 460 RKAPHQ---GLSDNW---IFD-MKTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGP-----------AMLLYNVT 521 (695)
T ss_dssp BSSTTC---BCCCCE---EEE-TTTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSC-----------SEEEEETT
T ss_pred CCCCCC---ccccEE---EEe-CCCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCC-----------CEEEEECC
Confidence 322110 011110 000 001111111 12346777775689999998422111 11111222
Q ss_pred CceEEEEEe-------CCcEE-EEEEcC-CeEEEEeCC
Q psy14091 187 HEVIISAKG-------GHAHS-IALTKA-GRVWAFGSG 215 (694)
Q Consensus 187 ~~~i~~i~~-------G~~~~-~~lt~~-G~v~~wG~n 215 (694)
...+..+.. -..|+ +++..+ +++|++|-.
T Consensus 522 t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~ 559 (695)
T 2zwa_A 522 EEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGG 559 (695)
T ss_dssp TTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCB
T ss_pred CCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCc
Confidence 334544442 23466 454555 899999853
No 21
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=91.46 E-value=14 Score=37.86 Aligned_cols=186 Identities=13% Similarity=0.046 Sum_probs=98.1
Q ss_pred eEEeee-cCcEEEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCC--CeEEEEeCCC-eEEE
Q psy14091 33 EVPLSG-GFYHVALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGR--LHTLVLTSSG-VYAW 108 (694)
Q Consensus 33 i~~v~~-G~~~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~--~h~~~l~~~G-vy~w 108 (694)
+..++- +...++...+|.|+.|-.... ........ .....|..++... .+.++-..+| |..|
T Consensus 96 ~~~~~~s~~~l~~~~~d~~v~lw~~~~~-------------~~~~~~~~-~~~~~v~~v~~s~~~~~l~~~~~dg~i~iw 161 (401)
T 4aez_A 96 LNLLDWSNLNVVAVALERNVYVWNADSG-------------SVSALAET-DESTYVASVKWSHDGSFLSVGLGNGLVDIY 161 (401)
T ss_dssp CBCEEECTTSEEEEEETTEEEEEETTTC-------------CEEEEEEC-CTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred EEEEeecCCCEEEEECCCeEEEeeCCCC-------------cEeEeeec-CCCCCEEEEEECCCCCEEEEECCCCeEEEE
Confidence 333443 333477778999999975431 11111111 1223566666543 4455556788 8888
Q ss_pred eCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCc
Q psy14091 109 GSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHE 188 (694)
Q Consensus 109 G~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~ 188 (694)
-...... ...+. .....|..++......+.-..+|.|+.|-....+. ....+.. ...
T Consensus 162 d~~~~~~-----------~~~~~-~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----------~~~~~~~-~~~ 218 (401)
T 4aez_A 162 DVESQTK-----------LRTMA-GHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANH----------QIGTLQG-HSS 218 (401)
T ss_dssp ETTTCCE-----------EEEEC-CCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC----------EEEEEEC-CSS
T ss_pred ECcCCeE-----------EEEec-CCCCceEEEEECCCEEEEEcCCCCEEEEecccCcc----------eeeEEcC-CCC
Confidence 6433211 11221 12345778888777777788899999996432111 1111111 223
Q ss_pred eEEEEEeC--CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEcc--CeEEEEe---cCCcEE
Q psy14091 189 VIISAKGG--HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGY--FHNLALG---TSNRLY 261 (694)
Q Consensus 189 ~i~~i~~G--~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~--~~~~~l~---~~g~v~ 261 (694)
.|..++.. ..+.+.-..||.|+.|-..... ....+......|..++... ...++.. .+|.|+
T Consensus 219 ~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~-----------~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~ 287 (401)
T 4aez_A 219 EVCGLAWRSDGLQLASGGNDNVVQIWDARSSI-----------PKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIH 287 (401)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEETTCSS-----------EEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEE
T ss_pred CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCC-----------ccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEE
Confidence 46666553 3355555678999999543210 0111222334566666543 2334433 588888
Q ss_pred EecCC
Q psy14091 262 TWGSS 266 (694)
Q Consensus 262 ~wG~~ 266 (694)
.|-..
T Consensus 288 i~d~~ 292 (401)
T 4aez_A 288 FWNAA 292 (401)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 88654
No 22
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=87.29 E-value=18 Score=40.51 Aligned_cols=19 Identities=11% Similarity=0.172 Sum_probs=14.9
Q ss_pred CcEEEEEEcCCeEEEEeCC
Q psy14091 197 HAHSIALTKAGRVWAFGSG 215 (694)
Q Consensus 197 ~~~~~~lt~~G~v~~wG~n 215 (694)
..|++++..+++||++|-.
T Consensus 598 ~~~~~~~~~~~~iyv~GG~ 616 (695)
T 2zwa_A 598 YGSQIKYITPRKLLIVGGT 616 (695)
T ss_dssp BSCEEEEEETTEEEEECCB
T ss_pred ccceEEEeCCCEEEEECCc
Confidence 4678887777999999853
No 23
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=86.95 E-value=23 Score=34.14 Aligned_cols=147 Identities=12% Similarity=0.067 Sum_probs=81.9
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEe---cCceEEEEEcCCcE
Q psy14091 82 NNKIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISA---GQYHSLAITSQGKL 157 (694)
Q Consensus 82 ~~~~~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~---G~~~s~~lt~~G~v 157 (694)
.....|..++......+.-..+| |+.|- .++ +..........+..+.. .....+....+|.|
T Consensus 102 ~~~~~i~~~~~~~~~l~~~~~d~~i~~~d---~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i 167 (313)
T 3odt_A 102 GHQGNVCSLSFQDGVVISGSWDKTAKVWK---EGS-----------LVYNLQAHNASVWDAKVVSFSENKFLTASADKTI 167 (313)
T ss_dssp CCSSCEEEEEEETTEEEEEETTSEEEEEE---TTE-----------EEEEEECCSSCEEEEEEEETTTTEEEEEETTSCE
T ss_pred hcccCEEEEEecCCEEEEEeCCCCEEEEc---CCc-----------EEEecccCCCceeEEEEccCCCCEEEEEECCCCE
Confidence 34447888888777777778889 88884 111 11111112233555543 45666777888999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeC-CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeecc
Q psy14091 158 YTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGG-HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYG 236 (694)
Q Consensus 158 ~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G-~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~ 236 (694)
+.|-.. .....+.......+..++.. ....++-..+|.|+.|-..... ....+..
T Consensus 168 ~i~d~~-------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~-----------~~~~~~~ 223 (313)
T 3odt_A 168 KLWQND-------------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGD-----------VLRTYEG 223 (313)
T ss_dssp EEEETT-------------EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCC-----------EEEEEEC
T ss_pred EEEecC-------------ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchh-----------hhhhhhc
Confidence 999411 01111222123335444432 2235566788999999543211 1112223
Q ss_pred CCCCeEEEEEccC-eEEEEecCCcEEEecCC
Q psy14091 237 LPEPISMIATGYF-HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 237 ~~~~i~~i~~g~~-~~~~l~~~g~v~~wG~~ 266 (694)
....|..++...+ ..++...+|.|++|-..
T Consensus 224 ~~~~i~~~~~~~~~~l~~~~~dg~v~iwd~~ 254 (313)
T 3odt_A 224 HESFVYCIKLLPNGDIVSCGEDRTVRIWSKE 254 (313)
T ss_dssp CSSCEEEEEECTTSCEEEEETTSEEEEECTT
T ss_pred CCceEEEEEEecCCCEEEEecCCEEEEEECC
Confidence 3456777776544 55666789999999754
No 24
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=82.69 E-value=35 Score=32.72 Aligned_cols=184 Identities=10% Similarity=-0.026 Sum_probs=93.6
Q ss_pred CeEEeee--cCcEEEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeC--CCeEEEEeCCC-eE
Q psy14091 32 PEVPLSG--GFYHVALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACG--RLHTLVLTSSG-VY 106 (694)
Q Consensus 32 ~i~~v~~--G~~~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G--~~h~~~l~~~G-vy 106 (694)
.|..++. |...+....||.|+.|-... ...+..+......|..++.. ..+.+.-..+| +.
T Consensus 20 ~v~~~~~~~~~~l~s~~~dg~v~vw~~~~---------------~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 84 (313)
T 3odt_A 20 DVRDVVAVDDSKVASVSRDGTVRLWSKDD---------------QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMIN 84 (313)
T ss_dssp CEEEEEEEETTEEEEEETTSEEEEEEESS---------------SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CcEEEEecCCCEEEEEEcCCcEEEEECCC---------------CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeEE
Confidence 3444443 33335555799999996422 11111121122245554433 34444555666 66
Q ss_pred EEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccC
Q psy14091 107 AWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALE 186 (694)
Q Consensus 107 ~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~ 186 (694)
.|=...... ......+. .....|..++......+.-..+|.|+.|-. + .+.......
T Consensus 85 ~~~~~~~~~--------~~~~~~~~-~~~~~i~~~~~~~~~l~~~~~d~~i~~~d~---~-----------~~~~~~~~~ 141 (313)
T 3odt_A 85 GVPLFATSG--------EDPLYTLI-GHQGNVCSLSFQDGVVISGSWDKTAKVWKE---G-----------SLVYNLQAH 141 (313)
T ss_dssp EEETTCCTT--------SCC-CEEC-CCSSCEEEEEEETTEEEEEETTSEEEEEET---T-----------EEEEEEECC
T ss_pred EEEeeecCC--------CCcccchh-hcccCEEEEEecCCEEEEEeCCCCEEEEcC---C-----------cEEEecccC
Confidence 664332110 00011111 123457778877777788889999999941 0 111111112
Q ss_pred CceEEEEEe---CCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeecc-CCCCeEEEEEccC-eEEEEecCCcEE
Q psy14091 187 HEVIISAKG---GHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYG-LPEPISMIATGYF-HNLALGTSNRLY 261 (694)
Q Consensus 187 ~~~i~~i~~---G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~-~~~~i~~i~~g~~-~~~~l~~~g~v~ 261 (694)
...+..+.. .....+....+|.|+.|-.. .....+.. ....+..++...+ ..++-..+|.|+
T Consensus 142 ~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~~-------------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~ 208 (313)
T 3odt_A 142 NASVWDAKVVSFSENKFLTASADKTIKLWQND-------------KVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIK 208 (313)
T ss_dssp SSCEEEEEEEETTTTEEEEEETTSCEEEEETT-------------EEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEE
T ss_pred CCceeEEEEccCCCCEEEEEECCCCEEEEecC-------------ceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEE
Confidence 233544443 55667777889999999411 11111111 3345666655433 355567888999
Q ss_pred EecCC
Q psy14091 262 TWGSS 266 (694)
Q Consensus 262 ~wG~~ 266 (694)
+|-..
T Consensus 209 i~d~~ 213 (313)
T 3odt_A 209 LVDMH 213 (313)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 99754
No 25
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=82.50 E-value=45 Score=33.86 Aligned_cols=151 Identities=8% Similarity=0.071 Sum_probs=77.7
Q ss_pred ecCCCCcEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEec--CceEEEEEcCCc
Q psy14091 80 FRNNKIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAG--QYHSLAITSQGK 156 (694)
Q Consensus 80 ~~~~~~~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G--~~~s~~lt~~G~ 156 (694)
+......|..++......+.-..+| |+.|-....+. ....+.. ....|..++.. ....+.-..||.
T Consensus 172 ~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~----------~~~~~~~-~~~~v~~~~~~~~~~~l~s~~~d~~ 240 (401)
T 4aez_A 172 MAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANH----------QIGTLQG-HSSEVCGLAWRSDGLQLASGGNDNV 240 (401)
T ss_dssp ECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSC----------EEEEEEC-CSSCEEEEEECTTSSEEEEEETTSC
T ss_pred ecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcc----------eeeEEcC-CCCCeeEEEEcCCCCEEEEEeCCCe
Confidence 3334447888888777777778888 99886543221 1111111 22346666654 334555567899
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCC--cEEEEEE---cCCeEEEEeCCCCcccCCCCCCCcccc
Q psy14091 157 LYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGH--AHSIALT---KAGRVWAFGSGIFGQLGTGSNTKHKVP 231 (694)
Q Consensus 157 v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~--~~~~~lt---~~G~v~~wG~n~~gqlg~~~~~~~~~p 231 (694)
|+.|-.... .+..........|..++... .+.++.. .+|.|+.|-.... .+
T Consensus 241 v~iwd~~~~------------~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~------------~~ 296 (401)
T 4aez_A 241 VQIWDARSS------------IPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATG------------AR 296 (401)
T ss_dssp EEEEETTCS------------SEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTC------------CE
T ss_pred EEEccCCCC------------CccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCC------------CE
Confidence 999964321 11111111122344555432 2333332 5899999954311 11
Q ss_pred eeeccCCCCeEEEEEccCeEEEE--e--cCCcEEEecC
Q psy14091 232 IELYGLPEPISMIATGYFHNLAL--G--TSNRLYTWGS 265 (694)
Q Consensus 232 ~~~~~~~~~i~~i~~g~~~~~~l--~--~~g~v~~wG~ 265 (694)
.........|..++...+...++ . .+|.|++|-.
T Consensus 297 ~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~ 334 (401)
T 4aez_A 297 VNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSY 334 (401)
T ss_dssp EEEEECSSCEEEEEECSSSSEEEEEECTTTCEEEEEEE
T ss_pred EEEEeCCCcEEEEEECCCCCeEEEEeecCCCcEEEEec
Confidence 11112334577766554332222 2 5788888864
No 26
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=81.57 E-value=38 Score=32.34 Aligned_cols=15 Identities=7% Similarity=0.186 Sum_probs=9.6
Q ss_pred eEEEeCCccEEEEeC
Q psy14091 372 SMLLSREGRVYTWGR 386 (694)
Q Consensus 372 ~~aLt~~G~vy~wG~ 386 (694)
.++++.+|++|+-..
T Consensus 211 ~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 211 GVGINSNGEILIADN 225 (286)
T ss_dssp EEEECTTCCEEEEEC
T ss_pred EEEECCCCCEEEEeC
Confidence 466666777776654
No 27
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=80.25 E-value=47 Score=32.62 Aligned_cols=109 Identities=9% Similarity=0.092 Sum_probs=62.1
Q ss_pred CcEEEEEec------CceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEeccc----CCceEEEEEeCCc------E
Q psy14091 136 IRVVSISAG------QYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKAL----EHEVIISAKGGHA------H 199 (694)
Q Consensus 136 ~~i~~i~~G------~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~----~~~~i~~i~~G~~------~ 199 (694)
..|..|+.. ....++-..+|.|..|-......+ ..+... ....|..++.... .
T Consensus 19 ~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~-----------~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 87 (366)
T 3k26_A 19 QPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEI-----------RLLQSYVDADADENFYTCAWTYDSNTSHPL 87 (366)
T ss_dssp SCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCE-----------EEEEEEECSCTTCCEEEEEEEECTTTCCEE
T ss_pred CceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEE-----------EeeeeccccCCCCcEEEEEeccCCCCCCCE
Confidence 357777765 455677777889999964322111 111111 1234555544332 4
Q ss_pred EEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEcc---CeEEEEecCCcEEEecCC
Q psy14091 200 SIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGY---FHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 200 ~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~---~~~~~l~~~g~v~~wG~~ 266 (694)
.+.-..+|.|..|-.... .....+......|..++... ...+.-..+|.|++|-..
T Consensus 88 l~~~~~dg~i~v~d~~~~-----------~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~ 146 (366)
T 3k26_A 88 LAVAGSRGIIRIINPITM-----------QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQ 146 (366)
T ss_dssp EEEEETTCEEEEECTTTC-----------CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETT
T ss_pred EEEecCCCEEEEEEchhc-----------eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEee
Confidence 555668899999954321 11122223445788887643 455556789999999754
No 28
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=79.43 E-value=50 Score=32.43 Aligned_cols=185 Identities=11% Similarity=-0.002 Sum_probs=88.5
Q ss_pred EEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeC--CCeEEEEeCCC-eEEEeCCCCCccCCCC
Q psy14091 44 ALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACG--RLHTLVLTSSG-VYAWGSSQYGQLGIGL 120 (694)
Q Consensus 44 ~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G--~~h~~~l~~~G-vy~wG~n~~gqLG~~~ 120 (694)
....||.|+.|-... ...+..+......|..++.. ..+.+....|| |+.|-......
T Consensus 49 ~~~~dg~i~vwd~~~---------------~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~----- 108 (369)
T 3zwl_B 49 SCSKDSSASVWYSLN---------------GERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQC----- 108 (369)
T ss_dssp EEESSSCEEEEETTT---------------CCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCE-----
T ss_pred EEeCCCEEEEEeCCC---------------chhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcE-----
Confidence 334577888884322 12223333333467777665 34555567788 88885432111
Q ss_pred CCCCCccEEcCCCCCCcEEEEEecC--ceEEEEEcC-----CcEEEEeCCCCCCCCCCCCCCCCCCEEecccC-CceEEE
Q psy14091 121 IDQSPHPRIIPALANIRVVSISAGQ--YHSLAITSQ-----GKLYTWGWGVHGQLGLNTVEDMSEPQLVKALE-HEVIIS 192 (694)
Q Consensus 121 ~~~~~~p~~v~~~~~~~i~~i~~G~--~~s~~lt~~-----G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~-~~~i~~ 192 (694)
...+. ....+..++... ...++...+ |.|+.|-....................+.... ...+..
T Consensus 109 ------~~~~~--~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 109 ------VATWK--SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp ------EEEEE--CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred ------EEEee--cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 11111 222355554433 344444555 88888865432221111100111111121111 113554
Q ss_pred EEeC--CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEcc--CeEEEEecCCcEEEecCC
Q psy14091 193 AKGG--HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGY--FHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 193 i~~G--~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~--~~~~~l~~~g~v~~wG~~ 266 (694)
++.. ....++-..+|.|+.|-....+ .....+......|..++... ...++...+|.|++|-..
T Consensus 181 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~ 248 (369)
T 3zwl_B 181 AGWSTKGKYIIAGHKDGKISKYDVSNNY----------EYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVS 248 (369)
T ss_dssp EEECGGGCEEEEEETTSEEEEEETTTTT----------EEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETT
T ss_pred EEEcCCCCEEEEEcCCCEEEEEECCCCc----------EeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECC
Confidence 4443 3355556788999999543211 11122222334677776643 334555678888888654
No 29
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=77.63 E-value=69 Score=33.04 Aligned_cols=196 Identities=9% Similarity=0.039 Sum_probs=103.5
Q ss_pred eEEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCC-eEEEEeCCC-eEEEe
Q psy14091 33 EVPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRL-HTLVLTSSG-VYAWG 109 (694)
Q Consensus 33 i~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~-h~~~l~~~G-vy~wG 109 (694)
+..++..... +....||.|..|-... ...+..+......|..++.... ..+.-..|| |..|-
T Consensus 125 ~~~~~~~~~~l~sgs~dg~i~vwd~~~---------------~~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 125 ITCLQFEDNYVITGADDKMIRVYDSIN---------------KKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTT---------------TEEEEEECCCSSCEEEEEECSTTEEEEEETTSCEEEEE
T ss_pred EEEEEECCCEEEEEcCCCcEEEEECCC---------------CcEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCEEEEE
Confidence 3344444444 4456799999996432 2333334334447777776544 445556788 88886
Q ss_pred CCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEec----CceEEEEEcCCcEEEEeCCCCCCCCCCCCCC---------C
Q psy14091 110 SSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAG----QYHSLAITSQGKLYTWGWGVHGQLGLNTVED---------M 176 (694)
Q Consensus 110 ~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G----~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~---------~ 176 (694)
.... + ....+.. ....|..++.. ....+.-..||.|..|-.............. .
T Consensus 190 ~~~~-~----------~~~~~~~-h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 257 (464)
T 3v7d_B 190 IKKG-C----------CTHVFEG-HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPE 257 (464)
T ss_dssp TTTT-E----------EEEEECC-CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGG
T ss_pred CCCC-c----------EEEEECC-CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccC
Confidence 4321 1 1111111 12345555543 2455666789999999755432221110000 0
Q ss_pred CCCEEecc--cCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEcc--CeEE
Q psy14091 177 SEPQLVKA--LEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGY--FHNL 252 (694)
Q Consensus 177 ~~p~~v~~--~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~--~~~~ 252 (694)
..+..+.. -....+..++......+.-..+|.|..|-..... ....+......|..++... ...+
T Consensus 258 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~l~ 326 (464)
T 3v7d_B 258 ENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMK-----------CLYILSGHTDRIYSTIYDHERKRCI 326 (464)
T ss_dssp GCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTE-----------EEEEECCCSSCEEEEEEETTTTEEE
T ss_pred CCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCc-----------EEEEecCCCCCEEEEEEcCCCCEEE
Confidence 01111111 1223567777777777888889999999543211 1111222334676666554 3555
Q ss_pred EEecCCcEEEecCC
Q psy14091 253 ALGTSNRLYTWGSS 266 (694)
Q Consensus 253 ~l~~~g~v~~wG~~ 266 (694)
.-..+|.|++|-..
T Consensus 327 sg~~dg~i~vwd~~ 340 (464)
T 3v7d_B 327 SASMDTTIRIWDLE 340 (464)
T ss_dssp EEETTSCEEEEETT
T ss_pred EEeCCCcEEEEECC
Confidence 66788999999653
No 30
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=73.73 E-value=1e+02 Score=33.01 Aligned_cols=141 Identities=11% Similarity=0.122 Sum_probs=77.3
Q ss_pred CcEEEEEe-CCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCC---CCCcEEEEEe-cCceEEEEEcCCcEE
Q psy14091 85 IDVSSVAC-GRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPAL---ANIRVVSISA-GQYHSLAITSQGKLY 158 (694)
Q Consensus 85 ~~i~~v~~-G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~---~~~~i~~i~~-G~~~s~~lt~~G~v~ 158 (694)
..|..++. ...+.+....+| |..|-... +++ ...+... ....+..+.. .....++...+|.|+
T Consensus 254 ~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~-~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~ 322 (615)
T 1pgu_A 254 GGIFALSWLDSQKFATVGADATIRVWDVTT-SKC----------VQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLN 322 (615)
T ss_dssp SCEEEEEESSSSEEEEEETTSEEEEEETTT-TEE----------EEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEE
T ss_pred CceEEEEEcCCCEEEEEcCCCcEEEEECCC-CcE----------EEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEE
Confidence 35666665 444555566788 88886432 111 0111110 0112333332 556677778899999
Q ss_pred EEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCC
Q psy14091 159 TWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLP 238 (694)
Q Consensus 159 ~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~ 238 (694)
.|-.... .....+. .....|..++. .. .+.-..+|.|..|-.. +.. ....
T Consensus 323 ~~d~~~~-----------~~~~~~~-~~~~~v~~~~~-~~-l~~~~~dg~i~~w~~~---------------~~~-~~~~ 372 (615)
T 1pgu_A 323 FYELGHD-----------EVLKTIS-GHNKGITALTV-NP-LISGSYDGRIMEWSSS---------------SMH-QDHS 372 (615)
T ss_dssp EEETTEE-----------EEEEEEC-CCSSCEEEEET-TT-TEEEETTSCEEETTTT---------------EEE-CCCC
T ss_pred EEECCCC-----------cEEEEEe-CCCCCEEEEEe-cC-cEEECCCCeEEEEEch---------------hhc-Cccc
Confidence 9963320 0001111 12345788887 66 5666789999999443 111 2333
Q ss_pred CCeEEEEEc-cCeEEEEecCCcEEEecCC
Q psy14091 239 EPISMIATG-YFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 239 ~~i~~i~~g-~~~~~~l~~~g~v~~wG~~ 266 (694)
..|..++.. ....+....+|.+..|-..
T Consensus 373 ~~v~~~~~~~~~~l~~~~~d~~i~~~~~~ 401 (615)
T 1pgu_A 373 NLIVSLDNSKAQEYSSISWDDTLKVNGIT 401 (615)
T ss_dssp SCEEEEECCSTTCCEEEETTTEEEETTEE
T ss_pred CceEEEEECCCcEEEEEeCCCCEEEEEcc
Confidence 456666654 3455566788889888654
No 31
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=71.96 E-value=73 Score=30.68 Aligned_cols=147 Identities=7% Similarity=-0.047 Sum_probs=74.5
Q ss_pred cEEEEEeCCC--eEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEec--CceEEEEEcCCcEEEE
Q psy14091 86 DVSSVACGRL--HTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAG--QYHSLAITSQGKLYTW 160 (694)
Q Consensus 86 ~i~~v~~G~~--h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G--~~~s~~lt~~G~v~~w 160 (694)
.|..++...+ ..++-..+| |+.|-..... .............|..++.. ....+.-..+|.|+.|
T Consensus 99 ~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~----------~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~ 168 (337)
T 1gxr_A 99 YIRSCKLLPDGCTLIVGGEASTLSIWDLAAPT----------PRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVW 168 (337)
T ss_dssp BEEEEEECTTSSEEEEEESSSEEEEEECCCC------------EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCcEEEEECCCCC----------cceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEE
Confidence 5666665543 344456678 8888543211 00111111112346666554 3455566678999999
Q ss_pred eCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeC--CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCC
Q psy14091 161 GWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGG--HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLP 238 (694)
Q Consensus 161 G~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G--~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~ 238 (694)
-.... .....+.. ....|..++.. ....+....+|.|+.|-.... .+.......
T Consensus 169 d~~~~-----------~~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~------------~~~~~~~~~ 224 (337)
T 1gxr_A 169 DLHNQ-----------TLVRQFQG-HTDGASCIDISNDGTKLWTGGLDNTVRSWDLREG------------RQLQQHDFT 224 (337)
T ss_dssp ETTTT-----------EEEEEECC-CSSCEEEEEECTTSSEEEEEETTSEEEEEETTTT------------EEEEEEECS
T ss_pred eCCCC-----------ceeeeeec-ccCceEEEEECCCCCEEEEEecCCcEEEEECCCC------------ceEeeecCC
Confidence 64321 01111111 22346666653 335556668999999954321 111112334
Q ss_pred CCeEEEEEcc--CeEEEEecCCcEEEecCC
Q psy14091 239 EPISMIATGY--FHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 239 ~~i~~i~~g~--~~~~~l~~~g~v~~wG~~ 266 (694)
..+..++... ...++-..+|.|+.|-..
T Consensus 225 ~~v~~~~~s~~~~~l~~~~~~~~i~~~~~~ 254 (337)
T 1gxr_A 225 SQIFSLGYCPTGEWLAVGMESSNVEVLHVN 254 (337)
T ss_dssp SCEEEEEECTTSSEEEEEETTSCEEEEETT
T ss_pred CceEEEEECCCCCEEEEEcCCCcEEEEECC
Confidence 4566665533 344445677888888654
No 32
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=71.78 E-value=1.2e+02 Score=33.24 Aligned_cols=70 Identities=21% Similarity=0.363 Sum_probs=37.9
Q ss_pred cEEEEEECCC-EEEeecCCCCcCCCCCCCCCCCceeecccCCceEEEEe----cCCCceEE-EecCCcEEEEeCCCCC
Q psy14091 596 LHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSIS----AGQYHSLA-ITSQGKLYTWGWGVHG 667 (694)
Q Consensus 596 ~h~~~l~~~g-v~~wG~n~~GqLG~g~~~~~~~P~~v~~l~~~~v~~is----~G~~h~~a-l~~dG~v~~WG~n~~G 667 (694)
.|++++..+| +|..|-...+. +.+.......+.......+ +...+. .-.+|+++ +..||+||+.|.+.++
T Consensus 458 ~~~~~~l~~g~i~v~GG~~~~~-~~~~~~~~~~v~~ydp~t~-~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~~~~ 533 (656)
T 1k3i_A 458 FHTSVVLPDGSTFITGGQRRGI-PFEDSTPVFTPEIYVPEQD-TFYKQNPNSIVRVYHSISLLLPDGRVFNGGGGLCG 533 (656)
T ss_dssp SCEEEECTTSCEEEECCBSBCC-TTCCCSBCCCCEEEEGGGT-EEEECCCCSSCCCTTEEEEECTTSCEEEEECCCCT
T ss_pred cCCeEECCCCCEEEECCcccCc-CcCCCCcccceEEEcCCCC-ceeecCCCCCccccccHhhcCCCcEEEecCCCCCC
Confidence 5677777788 99998544332 1111122222222221111 222222 23478765 5689999999997665
No 33
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=70.07 E-value=1.2e+02 Score=32.37 Aligned_cols=67 Identities=10% Similarity=0.104 Sum_probs=38.8
Q ss_pred eEEEEEeCCc---EEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCC---CeEEEEEccC---eEEEEecCCc
Q psy14091 189 VIISAKGGHA---HSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPE---PISMIATGYF---HNLALGTSNR 259 (694)
Q Consensus 189 ~i~~i~~G~~---~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~---~i~~i~~g~~---~~~~l~~~g~ 259 (694)
.|..++...+ ..+.-..+|.|..|-.... .....+..... .|..++...+ ..+....+|.
T Consensus 162 ~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~-----------~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~ 230 (615)
T 1pgu_A 162 RINACHLKQSRPMRSMTVGDDGSVVFYQGPPF-----------KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK 230 (615)
T ss_dssp CEEEEEECSSSSCEEEEEETTTEEEEEETTTB-----------EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC
T ss_pred cEEEEEECCCCCcEEEEEeCCCcEEEEeCCCc-----------ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe
Confidence 4666655443 4556678899999953211 11112222233 5777776644 4555578899
Q ss_pred EEEecCC
Q psy14091 260 LYTWGSS 266 (694)
Q Consensus 260 v~~wG~~ 266 (694)
|++|-..
T Consensus 231 i~vwd~~ 237 (615)
T 1pgu_A 231 ISCFDGK 237 (615)
T ss_dssp EEEEETT
T ss_pred EEEEECC
Confidence 9999653
No 34
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=68.69 E-value=1e+02 Score=31.02 Aligned_cols=141 Identities=13% Similarity=0.061 Sum_probs=73.0
Q ss_pred eCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeC---CCeEEEEeCCC-eEEEeCCCCCccCCCCCC
Q psy14091 47 RNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACG---RLHTLVLTSSG-VYAWGSSQYGQLGIGLID 122 (694)
Q Consensus 47 ~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G---~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~ 122 (694)
.+|.|++|-....|.+. ..+..+......|..++.. ....+.-..|| |..|-....+...
T Consensus 55 ~~g~i~v~~~~~~~~~~-----------~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~----- 118 (402)
T 2aq5_A 55 GGGAFLVLPLGKTGRVD-----------KNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVL----- 118 (402)
T ss_dssp SSCCEEEEETTCCEECC-----------TTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSS-----
T ss_pred CCCEEEEEECccCCCCC-----------CCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCcc-----
Confidence 48999999876655431 1111122223367777764 34455556788 9888755432211
Q ss_pred CCCccEEcCCCCCCcEEEEEecCc---eEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEec-ccCCceEEEEEeC--
Q psy14091 123 QSPHPRIIPALANIRVVSISAGQY---HSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVK-ALEHEVIISAKGG-- 196 (694)
Q Consensus 123 ~~~~p~~v~~~~~~~i~~i~~G~~---~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~-~~~~~~i~~i~~G-- 196 (694)
....+...-......|..++.... ..+.-..||.|+.|-..... ....+. ......|..++..
T Consensus 119 ~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~~~~~v~~~~~~~~ 187 (402)
T 2aq5_A 119 PLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA-----------AVLTLGPDVHPDTIYSVDWSRD 187 (402)
T ss_dssp CBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE-----------EEEEECTTTCCSCEEEEEECTT
T ss_pred ccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC-----------ccEEEecCCCCCceEEEEECCC
Confidence 001111111112335777776544 34455678999999643210 011110 1123346666653
Q ss_pred CcEEEEEEcCCeEEEEeC
Q psy14091 197 HAHSIALTKAGRVWAFGS 214 (694)
Q Consensus 197 ~~~~~~lt~~G~v~~wG~ 214 (694)
....+.-..||.|+.|-.
T Consensus 188 ~~~l~~~~~d~~i~iwd~ 205 (402)
T 2aq5_A 188 GALICTSCRDKRVRVIEP 205 (402)
T ss_dssp SSCEEEEETTSEEEEEET
T ss_pred CCEEEEEecCCcEEEEeC
Confidence 334555567899999954
No 35
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=67.54 E-value=97 Score=30.38 Aligned_cols=183 Identities=12% Similarity=0.065 Sum_probs=96.0
Q ss_pred EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeC----CCeEEEEeCCC-eEEEeCCCCCccC
Q psy14091 43 VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACG----RLHTLVLTSSG-VYAWGSSQYGQLG 117 (694)
Q Consensus 43 ~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G----~~h~~~l~~~G-vy~wG~n~~gqLG 117 (694)
+....||.|+.|=... .....+..+......|..++.. ....+.-..|| |..|-.... +
T Consensus 27 ~~~~~dg~i~iw~~~~-------------~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~-~-- 90 (379)
T 3jrp_A 27 ATCSSDKTIKIFEVEG-------------ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG-R-- 90 (379)
T ss_dssp EEEETTSCEEEEEEET-------------TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETT-E--
T ss_pred EEEECCCcEEEEecCC-------------CcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCC-c--
Confidence 3344688999985421 0223333343344478888764 45556667788 888854321 0
Q ss_pred CCCCCCCCccEEcCCCCCCcEEEEEecC----ceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEE
Q psy14091 118 IGLIDQSPHPRIIPALANIRVVSISAGQ----YHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISA 193 (694)
Q Consensus 118 ~~~~~~~~~p~~v~~~~~~~i~~i~~G~----~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i 193 (694)
..+..........|..++... ...+....+|.|..|-...... ..+..+. .....|..+
T Consensus 91 -------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~---------~~~~~~~-~~~~~v~~~ 153 (379)
T 3jrp_A 91 -------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT---------TSPIIID-AHAIGVNSA 153 (379)
T ss_dssp -------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC---------CCEEEEE-CCTTCEEEE
T ss_pred -------eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc---------eeeEEec-CCCCceEEE
Confidence 001111111233477776653 3566667899999996443211 1111111 122345555
Q ss_pred EeC---------------CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccc-eeeccCCCCeEEEEEccC-----eEE
Q psy14091 194 KGG---------------HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVP-IELYGLPEPISMIATGYF-----HNL 252 (694)
Q Consensus 194 ~~G---------------~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p-~~~~~~~~~i~~i~~g~~-----~~~ 252 (694)
+.. ....++-..+|.|+.|-..... ....+ ..+..-...|..++...+ ..+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~--------~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~ 225 (379)
T 3jrp_A 154 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA--------QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLA 225 (379)
T ss_dssp EECCCC----------CTTCEEEEEETTSCEEEEEEETTT--------TEEEEEEEECCCSSCEEEEEECCCCSSSEEEE
T ss_pred EEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCC--------cceeeEEEEecccCcEeEEEECCCCCCCCeEE
Confidence 543 3455666789999999432110 11111 122223346777776643 445
Q ss_pred EEecCCcEEEecCC
Q psy14091 253 ALGTSNRLYTWGSS 266 (694)
Q Consensus 253 ~l~~~g~v~~wG~~ 266 (694)
....+|.|.+|-..
T Consensus 226 s~~~dg~i~iwd~~ 239 (379)
T 3jrp_A 226 SVSQDRTCIIWTQD 239 (379)
T ss_dssp EEETTSCEEEEEES
T ss_pred EEeCCCEEEEEeCC
Confidence 55788999999654
No 36
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=65.97 E-value=1e+02 Score=30.02 Aligned_cols=157 Identities=8% Similarity=0.076 Sum_probs=88.0
Q ss_pred eeeeeecCCCCcEEEEEeCCC-----eEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecC--c
Q psy14091 75 EPVVWFRNNKIDVSSVACGRL-----HTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQ--Y 146 (694)
Q Consensus 75 ~~i~~~~~~~~~i~~v~~G~~-----h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~--~ 146 (694)
..+..+......|..|+.... ..+.-..|| |..|-....++. ....+.. ....|..++... .
T Consensus 30 ~~~~~~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~---------~~~~~~~-h~~~v~~~~~~~~~~ 99 (368)
T 3mmy_A 30 KDIEVTSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQT---------IPKAQQM-HTGPVLDVCWSDDGS 99 (368)
T ss_dssp CCEECSSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCE---------EEEEEEE-CSSCEEEEEECTTSS
T ss_pred ceeEeccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCce---------eEEEecc-ccCCEEEEEECcCCC
Confidence 445555555568888888775 334446678 888865432221 1111111 223466666543 3
Q ss_pred eEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEe--CC--cEEEEEEcCCeEEEEeCCCCcccCC
Q psy14091 147 HSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKG--GH--AHSIALTKAGRVWAFGSGIFGQLGT 222 (694)
Q Consensus 147 ~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~--G~--~~~~~lt~~G~v~~wG~n~~gqlg~ 222 (694)
..+....||.|..|-..... ...+.. ....|..++. .. ...+.-..||.|+.|-....
T Consensus 100 ~l~s~~~dg~v~iwd~~~~~------------~~~~~~-~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~----- 161 (368)
T 3mmy_A 100 KVFTASCDKTAKMWDLSSNQ------------AIQIAQ-HDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS----- 161 (368)
T ss_dssp EEEEEETTSEEEEEETTTTE------------EEEEEE-CSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS-----
T ss_pred EEEEEcCCCcEEEEEcCCCC------------ceeecc-ccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC-----
Confidence 45566778999999643211 111111 2234666664 32 23444567899999943311
Q ss_pred CCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 223 GSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 223 ~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
.+.........+..+.......++...++.+..|-..
T Consensus 162 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 198 (368)
T 3mmy_A 162 -------NPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLE 198 (368)
T ss_dssp -------SCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECS
T ss_pred -------cEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEec
Confidence 1112223344666777777777888888999888654
No 37
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=65.88 E-value=99 Score=29.84 Aligned_cols=194 Identities=14% Similarity=0.090 Sum_probs=103.5
Q ss_pred EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeC---CCeEEEEeCCC-eEEEeCCCCCccCC
Q psy14091 43 VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACG---RLHTLVLTSSG-VYAWGSSQYGQLGI 118 (694)
Q Consensus 43 ~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G---~~h~~~l~~~G-vy~wG~n~~gqLG~ 118 (694)
++++++|++|.---.. |..+ .. ..+ ...+.+|+.+.+- ....+++|++| +...-...+-+-
T Consensus 39 l~fT~~G~v~~~~~~~---lp~~---~~----~~l---l~~~e~i~~v~~~~~~~~~~v~~T~~G~iKr~~l~~~~~~-- 103 (276)
T 3no0_A 39 FLVSNRGRVYWIAGSQ---ALQG---SK----VSL---KSREEKIVGAFIREKFGNRLLLATKKGYVKKIPLAEFEYK-- 103 (276)
T ss_dssp EEEETTSEEEEECSHH---HHTS---EE----CCC---SSTTCCEEEEEEGGGSCSEEEEEETTSEEEEEEGGGTTTC--
T ss_pred EEEcCCCeEEEEEhhh---CccC---cc----ccc---CCCCCEEEEEECCcCCCCEEEEEeCCCEEEEEEHHHhhhh--
Confidence 7888999999864321 1000 00 002 2245578888661 25688899999 776654443211
Q ss_pred CCCCCCCccEEcCCCCCCcEEEEEe--cCceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeC
Q psy14091 119 GLIDQSPHPRIIPALANIRVVSISA--GQYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGG 196 (694)
Q Consensus 119 ~~~~~~~~p~~v~~~~~~~i~~i~~--G~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G 196 (694)
..-...+....+..++.+.. +..+.+++|++|++|.+-....-.+|+...-.. .+..-.+++|+.+...
T Consensus 104 -----~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~r~~~~eip~~gR~a~Gv~----~i~L~~~d~vv~~~~~ 174 (276)
T 3no0_A 104 -----AQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVARFSVREVPPSTPGARGVQ----GIKLEKNDETSGLRIW 174 (276)
T ss_dssp -----STTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEEEEEGGGSCBCCTTCCCEE----CCCCCTTCCEEEEEEE
T ss_pred -----cCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEEEEEhhhCCCcCCCCCCEE----EEccCCCCEEEEEEEe
Confidence 01111222223334555433 455689999999999997655444443321110 1222244567665443
Q ss_pred --CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEE--EccCeEEEEecCCcEEE--ecC
Q psy14091 197 --HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIA--TGYFHNLALGTSNRLYT--WGS 265 (694)
Q Consensus 197 --~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~--~g~~~~~~l~~~g~v~~--wG~ 265 (694)
..+.+++|++|.+.-.-...+-..+.+....... .-.+++..+. .+.+..++++++|.+.. +-.
T Consensus 175 ~~~~~ll~~T~~G~~kr~~~~e~~~~~R~gkGv~~i-----~~~~~lv~~~~~~~~~~i~~~t~~G~~ir~~~~~ 244 (276)
T 3no0_A 175 NGEPYLLVITAKGRVKKISHEEIPKTNRGVKGTEVS-----GTKDTLVDLIPIKEEVELLITTKNGKAFYDKINQ 244 (276)
T ss_dssp SSCSEEEEEETTSCEEEEEGGGSCCCCTTCCCEECC-----CSSSCEEEEEEESSEEEEEEEETTSCEEEEEEEG
T ss_pred CCCCEEEEEeCCCcEEEeEHHHcccCCCCCcceEEE-----cCCCcEEEEEEeCCCCEEEEEcCCCeEEEeeeCH
Confidence 3467888899987776544333222221111111 1123344432 34567888899998877 543
No 38
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=64.39 E-value=1.2e+02 Score=30.19 Aligned_cols=202 Identities=10% Similarity=0.048 Sum_probs=98.2
Q ss_pred CeEEeeecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCC---------eEEEEe
Q psy14091 32 PEVPLSGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRL---------HTLVLT 101 (694)
Q Consensus 32 ~i~~v~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~---------h~~~l~ 101 (694)
.|..++-.... +....||.|+.|-...... .. ....+..+......|..++.... ..+...
T Consensus 18 ~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~------~~---~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~ 88 (397)
T 1sq9_A 18 DIFSVSACNSFTVSCSGDGYLKVWDNKLLDN------EN---PKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS 88 (397)
T ss_dssp CEEEEEECSSEEEEEETTSEEEEEESBCCTT------CC---GGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE
T ss_pred CeEEEEecCCeEEEEcCCCEEEEEECCCccc------cc---CCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc
Confidence 46666655555 4455799999997643210 00 11122222233446777665533 344456
Q ss_pred CCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCC----CCcEEEEEec------Cce-EEEEEcCCcEEEEeCCC-----
Q psy14091 102 SSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALA----NIRVVSISAG------QYH-SLAITSQGKLYTWGWGV----- 164 (694)
Q Consensus 102 ~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~----~~~i~~i~~G------~~~-s~~lt~~G~v~~wG~n~----- 164 (694)
.+| |+.|-...... ........+.... ...|..++.. ... .++...+|.|+.|-...
T Consensus 89 ~dg~i~iw~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 89 FSGDLLFYRITREDE------TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp TTSCEEEEEEEECTT------TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred CCCCEEEEEccCCcc------cccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccc
Confidence 788 88885432111 0000022222221 2446666655 444 55557889999996433
Q ss_pred -CCCCCCCCCCCCCCCE-Eec------ccCCceEEEEEeCCc-EEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeec
Q psy14091 165 -HGQLGLNTVEDMSEPQ-LVK------ALEHEVIISAKGGHA-HSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELY 235 (694)
Q Consensus 165 -~gqlg~~~~~~~~~p~-~v~------~~~~~~i~~i~~G~~-~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~ 235 (694)
...+. ..|. .+. ......|..++...+ ..++-..+|.|+.|-.... .....+.
T Consensus 163 ~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~~~-----------~~~~~~~ 224 (397)
T 1sq9_A 163 NSLTLN-------WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELSTL-----------RPLYNFE 224 (397)
T ss_dssp HHTTTC-------CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETTTT-----------EEEEEEE
T ss_pred ccceee-------ccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECCCC-----------ceeEEEe
Confidence 11111 1111 221 112233555554433 4444457889999954321 1111121
Q ss_pred c---C---CCCeEEEEEcc--CeEEEEecC---CcEEEecCC
Q psy14091 236 G---L---PEPISMIATGY--FHNLALGTS---NRLYTWGSS 266 (694)
Q Consensus 236 ~---~---~~~i~~i~~g~--~~~~~l~~~---g~v~~wG~~ 266 (694)
. . ...|..++... .+.++-..+ |.|++|-..
T Consensus 225 ~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~ 266 (397)
T 1sq9_A 225 SQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETE 266 (397)
T ss_dssp CCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETT
T ss_pred ccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECC
Confidence 2 2 44677776543 344444566 788888654
No 39
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=63.82 E-value=1e+02 Score=29.41 Aligned_cols=155 Identities=14% Similarity=0.103 Sum_probs=72.8
Q ss_pred cEEEEEeC-CCeEEEEeCCC--eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCceEEEEEcCCc-EEEEe
Q psy14091 86 DVSSVACG-RLHTLVLTSSG--VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQYHSLAITSQGK-LYTWG 161 (694)
Q Consensus 86 ~i~~v~~G-~~h~~~l~~~G--vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~s~~lt~~G~-v~~wG 161 (694)
++.-..++ ....++++.+| ++.++.... + ......|..+....+..+.-...+.....+++.+|+ +|.++
T Consensus 89 ~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~--~----~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~G~~~w~~~ 162 (276)
T 3no2_A 89 NALVAWCGHPSTILEVNMKGEVLSKTEFETG--I----ERPHAQFRQINKNKKGNYLVPLFATSEVREIAPNGQLLNSVK 162 (276)
T ss_dssp CEEEEEESTTEEEEEECTTSCEEEEEEECCS--C----SSGGGSCSCCEECTTSCEEEEETTTTEEEEECTTSCEEEEEE
T ss_pred CEEEEecCCCCEEEEEeCCCCEEEEEeccCC--C----CcccccccCceECCCCCEEEEecCCCEEEEECCCCCEEEEEE
Confidence 44444555 45566677788 777764321 0 000011222222233344433334455666776775 45554
Q ss_pred CCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCCcEEEEEEcC-Ce-EEEEeCCCCcccCCCCCCCcccceeeccCCC
Q psy14091 162 WGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGHAHSIALTKA-GR-VWAFGSGIFGQLGTGSNTKHKVPIELYGLPE 239 (694)
Q Consensus 162 ~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~~~~~~lt~~-G~-v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~ 239 (694)
.. ..|.-+..+.+..+.-........++++.+ |+ +|.++.+... + .....|..+..+++
T Consensus 163 ~~-------------~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w~~~~~~~~--~----~~l~~~~~~~~~~~ 223 (276)
T 3no2_A 163 LS-------------GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVRRVNANDIE--G----VQLFFVAQLFPLQN 223 (276)
T ss_dssp CS-------------SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEEEEEGGGSB--S----CCCSEEEEEEECTT
T ss_pred CC-------------CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEEEecCCCCC--C----ccccccccceEcCC
Confidence 32 112223333444454334444456777766 65 4566533211 0 01122333333444
Q ss_pred CeEEEEE--c---------cCeEEEEecCCcE-EEecC
Q psy14091 240 PISMIAT--G---------YFHNLALGTSNRL-YTWGS 265 (694)
Q Consensus 240 ~i~~i~~--g---------~~~~~~l~~~g~v-~~wG~ 265 (694)
....|+. | ....+.++.+|++ |.+..
T Consensus 224 G~i~v~~~~g~~~~~~~~~~~~~~~~~~~g~~~W~~~~ 261 (276)
T 3no2_A 224 GGLYICNWQGHDREAGKGKHPQLVEIDSEGKVVWQLND 261 (276)
T ss_dssp SCEEEEEECTTCTTGGGSCCCSEEEECTTSBEEEEECC
T ss_pred CCEEEEeccCccccccccCCceEEEECCCCCEEEEecC
Confidence 4445555 2 2357888888885 44443
No 40
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=63.74 E-value=1.1e+02 Score=29.45 Aligned_cols=158 Identities=11% Similarity=0.091 Sum_probs=75.9
Q ss_pred EEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecC-ceEEEEEcCCcEEEEeCCCCCC
Q psy14091 90 VACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQ-YHSLAITSQGKLYTWGWGVHGQ 167 (694)
Q Consensus 90 v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~-~~s~~lt~~G~v~~wG~n~~gq 167 (694)
+..+.-..++++.|| ++..+......+............... ....|..++... ...++...+|.|..|-......
T Consensus 7 ~~~~~v~~~~~s~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~--h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~ 84 (337)
T 1gxr_A 7 MGSKPAYSFHVTADGQMQPVPFPPDALIGPGIPRHARQINTLN--HGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGN 84 (337)
T ss_dssp EEEEECCEEEECSSSCEEECCCCTTSSSSTTCCSEEEEEEEEC--CSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTC
T ss_pred ccCCceeEEEECCCCCEEEeecCCCcEeccccCCccccceecc--CCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCc
Confidence 344556678889999 777776443322211111111111111 122355555433 2334444588999996543221
Q ss_pred CCCCCCCCCCCCEEecc-cCCceEEEEEeCC--cEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEE
Q psy14091 168 LGLNTVEDMSEPQLVKA-LEHEVIISAKGGH--AHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMI 244 (694)
Q Consensus 168 lg~~~~~~~~~p~~v~~-~~~~~i~~i~~G~--~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i 244 (694)
. .....+.. .....|..++... ...++-..+|.|+.|-.... .......+......|..+
T Consensus 85 ~--------~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~---------~~~~~~~~~~~~~~i~~~ 147 (337)
T 1gxr_A 85 K--------SPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAP---------TPRIKAELTSSAPACYAL 147 (337)
T ss_dssp C--------SCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC-----------EEEEEEECSSSCEEEE
T ss_pred e--------eeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCC---------CcceeeecccCCCceEEE
Confidence 1 11111111 1223466665543 34455567899999954321 001111222233456666
Q ss_pred EEcc--CeEEEEecCCcEEEecCC
Q psy14091 245 ATGY--FHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 245 ~~g~--~~~~~l~~~g~v~~wG~~ 266 (694)
+... ...+.-..+|.|+.|-..
T Consensus 148 ~~~~~~~~l~~~~~dg~v~~~d~~ 171 (337)
T 1gxr_A 148 AISPDSKVCFSCCSDGNIAVWDLH 171 (337)
T ss_dssp EECTTSSEEEEEETTSCEEEEETT
T ss_pred EECCCCCEEEEEeCCCcEEEEeCC
Confidence 6543 345555678889998654
No 41
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=63.28 E-value=1.1e+02 Score=29.60 Aligned_cols=16 Identities=13% Similarity=0.158 Sum_probs=12.2
Q ss_pred cEEEEEeCCeEEEEEC
Q psy14091 41 YHVALVRNRRVHTWGS 56 (694)
Q Consensus 41 ~~~~l~~~g~v~~wG~ 56 (694)
.|.+...+++||++|-
T Consensus 38 ~~~~~~~~~~iyv~GG 53 (315)
T 4asc_A 38 HVSLVTKENQVFVAGG 53 (315)
T ss_dssp EEEEECTTCCEEEEEE
T ss_pred ceEEEEECCEEEEEcC
Confidence 3456667999999995
No 42
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=61.27 E-value=62 Score=33.16 Aligned_cols=35 Identities=14% Similarity=0.138 Sum_probs=25.6
Q ss_pred cceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 230 VPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 230 ~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
.|.....++. |.++++ ....+++.+++.|..|--.
T Consensus 80 ~~~~~~~lp~-V~~l~f-d~~~L~v~~~~~l~v~dv~ 114 (388)
T 1xip_A 80 TFKWEKEIPD-VIFVCF-HGDQVLVSTRNALYSLDLE 114 (388)
T ss_dssp CCSEEEECTT-EEEEEE-ETTEEEEEESSEEEEEESS
T ss_pred cceEEeeCCC-eeEEEE-CCCEEEEEcCCcEEEEEch
Confidence 3433335676 999999 7777777788999998654
No 43
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=60.36 E-value=1.3e+02 Score=29.26 Aligned_cols=110 Identities=10% Similarity=0.059 Sum_probs=62.9
Q ss_pred CCcEEEEEecCc-----eEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeC--CcEEEEEEcCC
Q psy14091 135 NIRVVSISAGQY-----HSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGG--HAHSIALTKAG 207 (694)
Q Consensus 135 ~~~i~~i~~G~~-----~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G--~~~~~~lt~~G 207 (694)
...|..|+.... ..+.-..||.|..|-....++ .....+.. ....|..++.. ..+.+.-..||
T Consensus 39 ~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~---------~~~~~~~~-h~~~v~~~~~~~~~~~l~s~~~dg 108 (368)
T 3mmy_A 39 DDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQ---------TIPKAQQM-HTGPVLDVCWSDDGSKVFTASCDK 108 (368)
T ss_dssp SSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSC---------EEEEEEEE-CSSCEEEEEECTTSSEEEEEETTS
T ss_pred CCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCc---------eeEEEecc-ccCCEEEEEECcCCCEEEEEcCCC
Confidence 346888887764 344456789999996443111 11112221 22346666654 33556667899
Q ss_pred eEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEE--ccC--eEEEEecCCcEEEecCC
Q psy14091 208 RVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIAT--GYF--HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 208 ~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~--g~~--~~~~l~~~g~v~~wG~~ 266 (694)
.|..|-.... ...........|..+.. ..+ ..+.-..+|.|++|-..
T Consensus 109 ~v~iwd~~~~------------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~ 159 (368)
T 3mmy_A 109 TAKMWDLSSN------------QAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTR 159 (368)
T ss_dssp EEEEEETTTT------------EEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSS
T ss_pred cEEEEEcCCC------------CceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECC
Confidence 9999954321 12223344556777775 333 34445678999999754
No 44
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=60.17 E-value=56 Score=32.56 Aligned_cols=15 Identities=7% Similarity=0.191 Sum_probs=11.5
Q ss_pred EEEEEeCCeEEEEEC
Q psy14091 42 HVALVRNRRVHTWGS 56 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~ 56 (694)
|.+...+++||++|-
T Consensus 59 ~~~~~~~~~lyv~GG 73 (357)
T 2uvk_A 59 ATSAFIDGNLYVFGG 73 (357)
T ss_dssp CEEEEETTEEEEECC
T ss_pred ceEEEECCEEEEEcC
Confidence 455556899999994
No 45
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=58.20 E-value=2.9e+02 Score=32.73 Aligned_cols=57 Identities=9% Similarity=-0.004 Sum_probs=32.2
Q ss_pred cEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEcc-CeEEEEecCCcEEEecCC
Q psy14091 198 AHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGY-FHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 198 ~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~-~~~~~l~~~g~v~~wG~~ 266 (694)
.+.+.-..||.|..|-..... ..........|..++... ...++...+|.|+.|-..
T Consensus 1016 ~~l~s~~~dg~i~vwd~~~~~------------~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~ 1073 (1249)
T 3sfz_A 1016 KTLISSSEDSVIQVWNWQTGD------------YVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVI 1073 (1249)
T ss_dssp SCEEEECSSSBEEEEETTTTE------------EECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETT
T ss_pred CEEEEEcCCCEEEEEECCCCc------------eEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECC
Confidence 344455678899999543211 111223334566665443 344556788889999754
No 46
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=56.59 E-value=64 Score=33.02 Aligned_cols=65 Identities=9% Similarity=0.135 Sum_probs=43.2
Q ss_pred EEEEEeCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 190 IISAKGGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 190 i~~i~~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
|..+++ ....+++.++|.|..|=-....+. .....+...+.++.+-....++++.+|.|++|--.
T Consensus 90 V~~l~f-d~~~L~v~~~~~l~v~dv~sl~~~-----------~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~ 154 (388)
T 1xip_A 90 VIFVCF-HGDQVLVSTRNALYSLDLEELSEF-----------RTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLR 154 (388)
T ss_dssp EEEEEE-ETTEEEEEESSEEEEEESSSTTCE-----------EEEEECSSCEEEEEECSSEEEEEETTSEEEEEETT
T ss_pred eeEEEE-CCCEEEEEcCCcEEEEEchhhhcc-----------CccceeecceeeEEecCCCEEEEECCCCEEEEEcc
Confidence 889999 767777779999999954332211 01112233466666666567778999999999654
No 47
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=53.87 E-value=3.4e+02 Score=32.16 Aligned_cols=107 Identities=12% Similarity=0.058 Sum_probs=51.9
Q ss_pred cEEEEEecC-ceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEe--CCcEEEEEEcCCeEEEEe
Q psy14091 137 RVVSISAGQ-YHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKG--GHAHSIALTKAGRVWAFG 213 (694)
Q Consensus 137 ~i~~i~~G~-~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~--G~~~~~~lt~~G~v~~wG 213 (694)
.|..++... ...++...+|.|+.|-...... ...+... ...|..++. .....+.-..||.|+.|-
T Consensus 1046 ~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~-----------~~~~~~~-~~~v~~~~~s~d~~~l~s~s~d~~v~iwd 1113 (1249)
T 3sfz_A 1046 TVKDFRLLQDSRLLSWSFDGTVKVWNVITGRI-----------ERDFTCH-QGTVLSCAISSDATKFSSTSADKTAKIWS 1113 (1249)
T ss_dssp CEEEEEECSSSEEEEEESSSEEEEEETTTTCC-----------CEEEECC-SSCCCCEEECSSSSSCEEECCSSCCCEEC
T ss_pred cEEEEEEcCCCcEEEEECCCcEEEEECCCCce-----------eEEEccc-CCcEEEEEECCCCCEEEEEcCCCcEEEEE
Confidence 355555433 3455667889999996432111 1111111 112333332 223344455678888884
Q ss_pred CCCCcccCCCCCCCcccceeeccCCCCeEEEEEccC--eEEEEecCCcEEEecCC
Q psy14091 214 SGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYF--HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 214 ~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~--~~~~l~~~g~v~~wG~~ 266 (694)
......+ ..+..-...|..++...+ ..+.-..+|.|++|-..
T Consensus 1114 ~~~~~~~-----------~~l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~ 1157 (1249)
T 3sfz_A 1114 FDLLSPL-----------HELKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVS 1157 (1249)
T ss_dssp SSSSSCS-----------BCCCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESS
T ss_pred CCCccee-----------eeeccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 4321111 111122335666665543 34444678888888654
No 48
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=53.05 E-value=1.8e+02 Score=28.82 Aligned_cols=98 Identities=9% Similarity=0.069 Sum_probs=53.2
Q ss_pred ceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEe--CCcEEEEEEcCCeEEEEeCCCCcccCCC
Q psy14091 146 YHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKG--GHAHSIALTKAGRVWAFGSGIFGQLGTG 223 (694)
Q Consensus 146 ~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~--G~~~~~~lt~~G~v~~wG~n~~gqlg~~ 223 (694)
...++...+|.|+.|-..... ....+.. ....|..++. .....+.-..+|.|+.|-....
T Consensus 218 ~~~~~~~~~g~i~~~d~~~~~-----------~~~~~~~-~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~------ 279 (425)
T 1r5m_A 218 DKFVIPGPKGAIFVYQITEKT-----------PTGKLIG-HHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNG------ 279 (425)
T ss_dssp TEEEEECGGGCEEEEETTCSS-----------CSEEECC-CSSCEEEEEEETTTTEEEEEETTSCEEEECSSSB------
T ss_pred CEEEEEcCCCeEEEEEcCCCc-----------eeeeecc-CCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC------
Confidence 445566678889988643311 1112211 1233555443 3445555667899999953321
Q ss_pred CCCCcccceeeccCCCCeEEEEEccC-eEEEEecCCcEEEecCC
Q psy14091 224 SNTKHKVPIELYGLPEPISMIATGYF-HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 224 ~~~~~~~p~~~~~~~~~i~~i~~g~~-~~~~l~~~g~v~~wG~~ 266 (694)
.....+......|..++...+ ..++...+|.|++|-..
T Consensus 280 -----~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~ 318 (425)
T 1r5m_A 280 -----NSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLK 318 (425)
T ss_dssp -----SCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETT
T ss_pred -----ccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECC
Confidence 111122223446777766544 55556788999999754
No 49
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=53.00 E-value=1.7e+02 Score=28.37 Aligned_cols=153 Identities=9% Similarity=-0.031 Sum_probs=82.4
Q ss_pred CCcEEEEEeC------CCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCC-CCCCcEEEEEecCc------eEE
Q psy14091 84 KIDVSSVACG------RLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPA-LANIRVVSISAGQY------HSL 149 (694)
Q Consensus 84 ~~~i~~v~~G------~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~-~~~~~i~~i~~G~~------~s~ 149 (694)
...|..|+.- ....++-..++ |..|-......+. ....... .....|..++.... ..+
T Consensus 18 ~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~--------~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~ 89 (366)
T 3k26_A 18 NQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIR--------LLQSYVDADADENFYTCAWTYDSNTSHPLLA 89 (366)
T ss_dssp CSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEE--------EEEEEECSCTTCCEEEEEEEECTTTCCEEEE
T ss_pred CCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEE--------eeeeccccCCCCcEEEEEeccCCCCCCCEEE
Confidence 3467777775 45566667777 7777644322110 0110110 11234666555433 455
Q ss_pred EEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeC---CcEEEEEEcCCeEEEEeCCCCcccCCCCCC
Q psy14091 150 AITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGG---HAHSIALTKAGRVWAFGSGIFGQLGTGSNT 226 (694)
Q Consensus 150 ~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G---~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~ 226 (694)
.-..+|.|..|-.... .....+.. ....|..++.. ....+.-..||.|+.|-.....
T Consensus 90 ~~~~dg~i~v~d~~~~-----------~~~~~~~~-~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~-------- 149 (366)
T 3k26_A 90 VAGSRGIIRIINPITM-----------QCIKHYVG-HGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDT-------- 149 (366)
T ss_dssp EEETTCEEEEECTTTC-----------CEEEEEES-CCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTE--------
T ss_pred EecCCCEEEEEEchhc-----------eEeeeecC-CCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCe--------
Confidence 5678899999953321 11111221 23457777663 3556666789999999543211
Q ss_pred Ccccceee---ccCCCCeEEEEEcc--CeEEEEecCCcEEEecCCC
Q psy14091 227 KHKVPIEL---YGLPEPISMIATGY--FHNLALGTSNRLYTWGSSP 267 (694)
Q Consensus 227 ~~~~p~~~---~~~~~~i~~i~~g~--~~~~~l~~~g~v~~wG~~~ 267 (694)
....+ ......|..++... ...+....+|.|++|-...
T Consensus 150 ---~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~ 192 (366)
T 3k26_A 150 ---LVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINS 192 (366)
T ss_dssp ---EEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCS
T ss_pred ---EEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCC
Confidence 11111 23345677777653 3555567899999997653
No 50
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=51.98 E-value=2.8e+02 Score=30.74 Aligned_cols=176 Identities=12% Similarity=0.026 Sum_probs=90.1
Q ss_pred EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeCCC--eEEEEeCCC-eEEEeCCCCCccCCC
Q psy14091 43 VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACGRL--HTLVLTSSG-VYAWGSSQYGQLGIG 119 (694)
Q Consensus 43 ~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G~~--h~~~l~~~G-vy~wG~n~~gqLG~~ 119 (694)
+....||.|++|-.... ..+..+......|..++.... +.+.-..|| |..|-......
T Consensus 71 ~~~~~dg~i~vw~~~~~---------------~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~---- 131 (814)
T 3mkq_A 71 IVGSDDFRIRVFNYNTG---------------EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWA---- 131 (814)
T ss_dssp EEEETTSEEEEEETTTC---------------CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSE----
T ss_pred EEEeCCCeEEEEECCCC---------------cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCce----
Confidence 44556889999965431 122222222335666665543 344556678 87775432111
Q ss_pred CCCCCCccEEcCCCCCCcEEEEEecC---ceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEe-
Q psy14091 120 LIDQSPHPRIIPALANIRVVSISAGQ---YHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKG- 195 (694)
Q Consensus 120 ~~~~~~~p~~v~~~~~~~i~~i~~G~---~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~- 195 (694)
+..........|..++... ...+....+|.|+.|-.... .....+.......+..++.
T Consensus 132 -------~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~-----------~~~~~~~~~~~~~v~~~~~~ 193 (814)
T 3mkq_A 132 -------LEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQS-----------TPNFTLTTGQERGVNYVDYY 193 (814)
T ss_dssp -------EEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCS-----------SCSEEEECCCTTCCCEEEEC
T ss_pred -------EEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCC-----------cceeEEecCCCCCEEEEEEE
Confidence 1111111223466666543 34555677899999964321 1111222111122333433
Q ss_pred ---CCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccC--eEEEEecCCcEEEecCC
Q psy14091 196 ---GHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYF--HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 196 ---G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~--~~~~l~~~g~v~~wG~~ 266 (694)
.....++-..+|.|..|-... + .....+......|..++...+ ..+.-..+|.|++|-..
T Consensus 194 ~~~~~~~l~~~~~dg~i~~~d~~~-~----------~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~ 258 (814)
T 3mkq_A 194 PLPDKPYMITASDDLTIKIWDYQT-K----------SCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSS 258 (814)
T ss_dssp CSTTCCEEEEECTTSEEEEEETTT-T----------EEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETT
T ss_pred ECCCCCEEEEEeCCCEEEEEECCC-C----------cEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 344555666889999995421 1 112222233346777765544 34555678999999654
No 51
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=51.71 E-value=2.9e+02 Score=30.75 Aligned_cols=184 Identities=13% Similarity=0.084 Sum_probs=96.8
Q ss_pred EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeC----CCeEEEEeCCC-eEEEeCCCCCccC
Q psy14091 43 VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACG----RLHTLVLTSSG-VYAWGSSQYGQLG 117 (694)
Q Consensus 43 ~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G----~~h~~~l~~~G-vy~wG~n~~gqLG 117 (694)
+....||.|.+|-... .....+..+......|..++.. ....+.-..|| |+.|-... ++
T Consensus 25 atg~~dg~I~vwd~~~-------------~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~-~~-- 88 (753)
T 3jro_A 25 ATCSSDKTIKIFEVEG-------------ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEEN-GR-- 88 (753)
T ss_dssp EEEETTTEEEEEEEET-------------TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEET-TE--
T ss_pred EEEECCCcEEEEecCC-------------CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCC-Cc--
Confidence 4445699999995321 0122333333344478888764 34556667788 88886432 10
Q ss_pred CCCCCCCCccEEcCCCCCCcEEEEEecC----ceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEE
Q psy14091 118 IGLIDQSPHPRIIPALANIRVVSISAGQ----YHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISA 193 (694)
Q Consensus 118 ~~~~~~~~~p~~v~~~~~~~i~~i~~G~----~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i 193 (694)
..+..........|..++... ...+..+.||.|..|-...... .....+.. ....|..+
T Consensus 89 -------~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~---------~~~~~~~~-~~~~v~~l 151 (753)
T 3jro_A 89 -------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT---------TSPIIIDA-HAIGVNSA 151 (753)
T ss_dssp -------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSC---------CCCEEEEC-CSSCEEEE
T ss_pred -------ccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCC---------cceeEeec-CCCceEEE
Confidence 001111111233477776653 4566677899999996433211 11111211 12335555
Q ss_pred EeCC---------------cEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEccC-----eEEE
Q psy14091 194 KGGH---------------AHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGYF-----HNLA 253 (694)
Q Consensus 194 ~~G~---------------~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~~-----~~~~ 253 (694)
+... ...+.-..||.|+.|-..... ........+..-...|..++...+ ..+.
T Consensus 152 ~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~-------~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s 224 (753)
T 3jro_A 152 SWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDA-------QTYVLESTLEGHSDWVRDVAWSPTVLLRSYLAS 224 (753)
T ss_dssp EECCCC---------CGGGCCEEEEETTSCEEEEEEETTT-------TEEEEEEEECCCSSCEEEEEECCCCSSSEEEEE
T ss_pred EecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCc-------ccceeeeeecCCCCcEEEEEeccCCCCCCEEEE
Confidence 5433 345556678999999432210 000111122233456777776644 4455
Q ss_pred EecCCcEEEecCC
Q psy14091 254 LGTSNRLYTWGSS 266 (694)
Q Consensus 254 l~~~g~v~~wG~~ 266 (694)
-..+|.|++|-..
T Consensus 225 ~s~Dg~I~iwd~~ 237 (753)
T 3jro_A 225 VSQDRTCIIWTQD 237 (753)
T ss_dssp EESSSCEEEEEES
T ss_pred EecCCEEEEecCC
Confidence 5788999999654
No 52
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=46.83 E-value=2.3e+02 Score=28.07 Aligned_cols=211 Identities=10% Similarity=-0.002 Sum_probs=108.0
Q ss_pred eecCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeee--cCCCCcEEEEEeCC-----CeEEEEeCCC-eEE
Q psy14091 37 SGGFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWF--RNNKIDVSSVACGR-----LHTLVLTSSG-VYA 107 (694)
Q Consensus 37 ~~G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~--~~~~~~i~~v~~G~-----~h~~~l~~~G-vy~ 107 (694)
+..... +++++.|++|..-...--..+. ...-.++..+ ...+.+|+.+.... ...+++|++| +.-
T Consensus 50 ~~t~d~ll~fT~~Gr~y~~~~~~lp~~~r------~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr 123 (327)
T 3uc1_A 50 CSTHDLILFFTTQGRVYRAKAYDLPEASR------TARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKK 123 (327)
T ss_dssp EETTSEEEEEETTSEEEEEEGGGSCBCCS------SSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEE
T ss_pred eCCCCEEEEEeCCCeEEEEEHHHCcCCCc------cCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEE
Confidence 334444 6788899999987543211110 1122222111 12345788876654 4678899999 776
Q ss_pred EeCCCCCccCCCCCCCCCccEEcCCCCCCcEEE--EEecCceEEEEEcCCcEEEEeCC--CCCCCCCCCCCCCCCCEEec
Q psy14091 108 WGSSQYGQLGIGLIDQSPHPRIIPALANIRVVS--ISAGQYHSLAITSQGKLYTWGWG--VHGQLGLNTVEDMSEPQLVK 183 (694)
Q Consensus 108 wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~--i~~G~~~s~~lt~~G~v~~wG~n--~~gqlg~~~~~~~~~p~~v~ 183 (694)
.-...+-... ..-...+..-.+..++. +..+..+.+++|++|++|.+-.. .--.+|....-. ..+.
T Consensus 124 ~~l~~~~~~~------r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv----~~i~ 193 (327)
T 3uc1_A 124 SKLTDFDSNR------SGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGV----QGMR 193 (327)
T ss_dssp EEGGGGCCCC------SSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCE----ESSC
T ss_pred eEHHHhhccc------cCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCe----eeec
Confidence 6543322100 00011111112333443 34466788999999999999876 544444432111 1122
Q ss_pred ccCCceEEEEEeC--CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEE--EccCeEEEEecCCc
Q psy14091 184 ALEHEVIISAKGG--HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIA--TGYFHNLALGTSNR 259 (694)
Q Consensus 184 ~~~~~~i~~i~~G--~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~--~g~~~~~~l~~~g~ 259 (694)
.-.++.|+.+..- ..+.+++|++|.+.-.-...+-..+.+...... .++..-.+.++.+. .+....++++++|.
T Consensus 194 L~~~d~Vv~~~~~~~~~~ll~~T~~G~~Krt~l~e~~~~~R~~~G~~~--~~l~~~~d~lv~~~~~~~~~~i~l~T~~G~ 271 (327)
T 3uc1_A 194 FNIDDRLLSLNVVREGTYLLVATSGGYAKRTAIEEYPVQGRGGKGVLT--VMYDRRRGRLVGALIVDDDSELYAVTSGGG 271 (327)
T ss_dssp CCTTCCEEEEEECCTTCEEEEEETTSEEEEEEGGGSCBCCTTSCCEES--SCCCTTTCSEEEEEEECTTCEEEEEEGGGC
T ss_pred CCCCCEEEEEEEECCCCEEEEEeCCCcEEEEEHHHccccCcCCCcEEE--EEecCCCCeEEEEEEeCCCccEEEEcCCCe
Confidence 3345667776654 346788889987765533322221111111100 01101112344332 35567888899998
Q ss_pred EEEecC
Q psy14091 260 LYTWGS 265 (694)
Q Consensus 260 v~~wG~ 265 (694)
+.-+-.
T Consensus 272 ~ir~~~ 277 (327)
T 3uc1_A 272 VIRTAA 277 (327)
T ss_dssp EEEEEG
T ss_pred EEEEeh
Confidence 876643
No 53
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=45.68 E-value=2.3e+02 Score=27.88 Aligned_cols=166 Identities=12% Similarity=0.045 Sum_probs=82.7
Q ss_pred CCCCcEEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecC---------ceEEEE
Q psy14091 82 NNKIDVSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQ---------YHSLAI 151 (694)
Q Consensus 82 ~~~~~i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~---------~~s~~l 151 (694)
.....|..|+......+.-..|| |+.|-...... .........+.. ....|..++... ...+..
T Consensus 14 ~h~~~i~~~~~~~~~l~s~~~dg~i~iw~~~~~~~-----~~~~~~~~~~~~-h~~~v~~~~~~~~~~~~g~~~~~l~s~ 87 (397)
T 1sq9_A 14 AHDADIFSVSACNSFTVSCSGDGYLKVWDNKLLDN-----ENPKDKSYSHFV-HKSGLHHVDVLQAIERDAFELCLVATT 87 (397)
T ss_dssp CSSSCEEEEEECSSEEEEEETTSEEEEEESBCCTT-----CCGGGGEEEEEC-CTTCEEEEEEEEEEETTTEEEEEEEEE
T ss_pred hhhcCeEEEEecCCeEEEEcCCCEEEEEECCCccc-----ccCCCcceEEec-CCCcEEEEEEecccccCCccccEEEEE
Confidence 34447888888777677778899 99997543210 000011112211 223466655443 344555
Q ss_pred EcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccC----CceEEEEEeC------CcE-EEEEEcCCeEEEEeCCC----
Q psy14091 152 TSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALE----HEVIISAKGG------HAH-SIALTKAGRVWAFGSGI---- 216 (694)
Q Consensus 152 t~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~----~~~i~~i~~G------~~~-~~~lt~~G~v~~wG~n~---- 216 (694)
..+|.|+.|-...... ........+.... ...|..++.. ..+ .++-..+|.|+.|-...
T Consensus 88 ~~dg~i~iw~~~~~~~------~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~ 161 (397)
T 1sq9_A 88 SFSGDLLFYRITREDE------TKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADE 161 (397)
T ss_dssp ETTSCEEEEEEEECTT------TCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSH
T ss_pred cCCCCEEEEEccCCcc------cccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCccccc
Confidence 6789999996432111 0000022222221 2446655544 444 55556889999995443
Q ss_pred --CcccCCCCCCCcccce-ee-------ccCCCCeEEEEEccC-eEEEEecCCcEEEecCC
Q psy14091 217 --FGQLGTGSNTKHKVPI-EL-------YGLPEPISMIATGYF-HNLALGTSNRLYTWGSS 266 (694)
Q Consensus 217 --~gqlg~~~~~~~~~p~-~~-------~~~~~~i~~i~~g~~-~~~~l~~~g~v~~wG~~ 266 (694)
...+. ..|. .+ ......|..++...+ ..+.-..+|.|++|-..
T Consensus 162 ~~~~~~~-------~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~d~~ 215 (397)
T 1sq9_A 162 SNSLTLN-------WSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELS 215 (397)
T ss_dssp HHHTTTC-------CCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETT
T ss_pred cccceee-------ccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEEECC
Confidence 11111 1111 11 112345666665544 33344577888888654
No 54
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=42.67 E-value=2.6e+02 Score=27.54 Aligned_cols=145 Identities=11% Similarity=0.041 Sum_probs=73.8
Q ss_pred cEEEEEeCCC--eEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCC--CCCcEEEEEecC---ceEEEEEcCCcE
Q psy14091 86 DVSSVACGRL--HTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPAL--ANIRVVSISAGQ---YHSLAITSQGKL 157 (694)
Q Consensus 86 ~i~~v~~G~~--h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~--~~~~i~~i~~G~---~~s~~lt~~G~v 157 (694)
.|..|+.-.+ ..+.-..|| |..|-... + ..+..+ ....|..|+... ...+....||.|
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~-~-------------~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v 206 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ-K-------------AVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRI 206 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTT-T-------------EEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCC-C-------------cEEEEEcCCCCCEEEEEEccCCCceeeeeccCCce
Confidence 5666665443 334445677 88885332 1 111111 123477776532 344556778999
Q ss_pred EEEeCCCCCCCCCCCCCCCCCCEEec-ccCCceEEEEEeC---CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCccccee
Q psy14091 158 YTWGWGVHGQLGLNTVEDMSEPQLVK-ALEHEVIISAKGG---HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIE 233 (694)
Q Consensus 158 ~~wG~n~~gqlg~~~~~~~~~p~~v~-~~~~~~i~~i~~G---~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~ 233 (694)
..|-......+ ..+. ......+..++.. ....+.-..++.|+.|-... + .....
T Consensus 207 ~~wd~~~~~~~-----------~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-~----------~~~~~ 264 (357)
T 4g56_B 207 LLWDTRKPKPA-----------TRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-P----------DSAQT 264 (357)
T ss_dssp EECCTTSSSCB-----------CBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-G----------GGCEE
T ss_pred EEEECCCCcee-----------eeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-C----------cEeEE
Confidence 99943211110 0011 1112335666653 22333346789999995321 1 11122
Q ss_pred eccCCCCeEEEEEcc---CeEEEEecCCcEEEecCC
Q psy14091 234 LYGLPEPISMIATGY---FHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 234 ~~~~~~~i~~i~~g~---~~~~~l~~~g~v~~wG~~ 266 (694)
+......|..++... ...+.-.+||.|++|-..
T Consensus 265 ~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~ 300 (357)
T 4g56_B 265 SAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDAD 300 (357)
T ss_dssp ECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTT
T ss_pred EeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECC
Confidence 223345677777643 334445789999999654
No 55
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=41.52 E-value=1.5e+02 Score=28.67 Aligned_cols=15 Identities=7% Similarity=-0.199 Sum_probs=11.4
Q ss_pred EEEEEeCCeEEEEEC
Q psy14091 42 HVALVRNRRVHTWGS 56 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~ 56 (694)
|.+...+++||++|-
T Consensus 92 ~~~~~~~~~lyv~GG 106 (315)
T 4asc_A 92 FGLGEALNSIYVVGG 106 (315)
T ss_dssp CEEEEETTEEEEECC
T ss_pred eeEEEECCEEEEEeC
Confidence 445556899999996
No 56
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=40.66 E-value=2.4e+02 Score=26.72 Aligned_cols=18 Identities=17% Similarity=0.296 Sum_probs=12.9
Q ss_pred cEEEEEeCCeEEEEECCC
Q psy14091 41 YHVALVRNRRVHTWGSSS 58 (694)
Q Consensus 41 ~~~~l~~~g~v~~wG~n~ 58 (694)
.|.+...+++||++|-..
T Consensus 55 ~~~~~~~~~~l~v~GG~~ 72 (301)
T 2vpj_A 55 YVASVSLHDRIYVIGGYD 72 (301)
T ss_dssp SCEEEEETTEEEEECCBC
T ss_pred cccEEEECCEEEEEcCCC
Confidence 345556789999999643
No 57
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=39.95 E-value=4.2e+02 Score=29.27 Aligned_cols=175 Identities=10% Similarity=0.051 Sum_probs=86.6
Q ss_pred EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeC--CCeEEEEeCCC-eEEEeCCCCCccCCC
Q psy14091 43 VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACG--RLHTLVLTSSG-VYAWGSSQYGQLGIG 119 (694)
Q Consensus 43 ~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G--~~h~~~l~~~G-vy~wG~n~~gqLG~~ 119 (694)
++...+|.|..|-... ...+..+......|..++.. ....++-..+| |..|-......
T Consensus 29 a~~~~~g~v~iwd~~~---------------~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~---- 89 (814)
T 3mkq_A 29 LTTLYSGRVEIWNYET---------------QVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEK---- 89 (814)
T ss_dssp EEEETTSEEEEEETTT---------------TEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCE----
T ss_pred EEEeCCCEEEEEECCC---------------CceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcE----
Confidence 3444688999995432 12222222223345555443 34455566788 88886543211
Q ss_pred CCCCCCccEEcCCCCCCcEEEEEecCc--eEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCC
Q psy14091 120 LIDQSPHPRIIPALANIRVVSISAGQY--HSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGH 197 (694)
Q Consensus 120 ~~~~~~~p~~v~~~~~~~i~~i~~G~~--~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~ 197 (694)
...+.. ....|..++.... ..+.-..||.|..|-..... .....+. .....|..++...
T Consensus 90 -------~~~~~~-~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~----------~~~~~~~-~~~~~v~~~~~~p 150 (814)
T 3mkq_A 90 -------VVDFEA-HPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNW----------ALEQTFE-GHEHFVMCVAFNP 150 (814)
T ss_dssp -------EEEEEC-CSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTS----------EEEEEEE-CCSSCEEEEEEET
T ss_pred -------EEEEec-CCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCc----------eEEEEEc-CCCCcEEEEEEEc
Confidence 111111 1233666665433 34555678999999632210 0111111 1223466666543
Q ss_pred ---cEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeec-cCCCCeEEEEE----ccCeEEEEecCCcEEEecCC
Q psy14091 198 ---AHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELY-GLPEPISMIAT----GYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 198 ---~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~-~~~~~i~~i~~----g~~~~~~l~~~g~v~~wG~~ 266 (694)
...+.-..+|.|+.|-...... ...+. .....+..++. .....+.-..+|.|+.|-..
T Consensus 151 ~~~~~l~~~~~dg~v~vwd~~~~~~-----------~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~ 216 (814)
T 3mkq_A 151 KDPSTFASGCLDRTVKVWSLGQSTP-----------NFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQ 216 (814)
T ss_dssp TEEEEEEEEETTSEEEEEETTCSSC-----------SEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETT
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcc-----------eeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECC
Confidence 3445556789999995432110 11111 11134444444 33455555678889998643
No 58
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=39.67 E-value=2.7e+02 Score=26.94 Aligned_cols=149 Identities=12% Similarity=0.060 Sum_probs=78.6
Q ss_pred cEEEEEeCCC--eEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCC--CCCcEEEEEec----CceEEEEEcCCc
Q psy14091 86 DVSSVACGRL--HTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPAL--ANIRVVSISAG----QYHSLAITSQGK 156 (694)
Q Consensus 86 ~i~~v~~G~~--h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~--~~~~i~~i~~G----~~~s~~lt~~G~ 156 (694)
.|..++...+ ..+.-..|| |+.|=.... ....+..+ ....|..++.. ....+.-..||.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~------------~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 13 LIHDAVLDYYGKRLATCSSDKTIKIFEVEGE------------THKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEEEETT------------EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cEEEEEEcCCCCEEEEEECCCcEEEEecCCC------------cceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 5666665543 333334678 777753210 11111111 12347777764 455666678899
Q ss_pred EEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeCC----cEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccce
Q psy14091 157 LYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGGH----AHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPI 232 (694)
Q Consensus 157 v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G~----~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~ 232 (694)
|..|-..... ..+..........|..++... ...+....+|.|..|-...... ..+.
T Consensus 81 v~iwd~~~~~----------~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~---------~~~~ 141 (379)
T 3jrp_A 81 VLIWKEENGR----------WSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGT---------TSPI 141 (379)
T ss_dssp EEEEEEETTE----------EEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSC---------CCEE
T ss_pred EEEEEcCCCc----------eeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCc---------eeeE
Confidence 9999532210 001111111233576776653 3566667899999996442211 1122
Q ss_pred eeccCCCCeEEEEEcc---------------CeEEEEecCCcEEEecC
Q psy14091 233 ELYGLPEPISMIATGY---------------FHNLALGTSNRLYTWGS 265 (694)
Q Consensus 233 ~~~~~~~~i~~i~~g~---------------~~~~~l~~~g~v~~wG~ 265 (694)
.+......|..++... ...++-..+|.|++|-.
T Consensus 142 ~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 189 (379)
T 3jrp_A 142 IIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 189 (379)
T ss_dssp EEECCTTCEEEEEECCCC----------CTTCEEEEEETTSCEEEEEE
T ss_pred EecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEe
Confidence 2323344666666543 44555678889999853
No 59
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=38.64 E-value=2.5e+02 Score=26.22 Aligned_cols=15 Identities=0% Similarity=0.195 Sum_probs=9.4
Q ss_pred EEEEecCCcEEEecC
Q psy14091 251 NLALGTSNRLYTWGS 265 (694)
Q Consensus 251 ~~~l~~~g~v~~wG~ 265 (694)
.++++.+|++|+-..
T Consensus 211 ~i~~d~~G~l~v~~~ 225 (286)
T 1q7f_A 211 GVGINSNGEILIADN 225 (286)
T ss_dssp EEEECTTCCEEEEEC
T ss_pred EEEECCCCCEEEEeC
Confidence 456666777776543
No 60
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=37.61 E-value=3.1e+02 Score=26.95 Aligned_cols=107 Identities=7% Similarity=0.011 Sum_probs=54.1
Q ss_pred cEEEEEecCc--eEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccC--CceEEEEEeC---CcEEEEEEcCCeE
Q psy14091 137 RVVSISAGQY--HSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALE--HEVIISAKGG---HAHSIALTKAGRV 209 (694)
Q Consensus 137 ~i~~i~~G~~--~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~--~~~i~~i~~G---~~~~~~lt~~G~v 209 (694)
.|..|+...+ ..+.-..||.|..|-... ...+..+. ...|..|+.. ....+.-..||.|
T Consensus 141 ~V~~v~~spdg~~l~sgs~dg~v~iwd~~~--------------~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v 206 (357)
T 4g56_B 141 IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQ--------------KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRI 206 (357)
T ss_dssp CEEEEEECSSSSEEEEEETTSCEEEEETTT--------------TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEECCC--------------CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCce
Confidence 4666665443 344456789999995322 12222221 2346666653 2344556678999
Q ss_pred EEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEcc--CeEE-EEecCCcEEEecCC
Q psy14091 210 WAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGY--FHNL-ALGTSNRLYTWGSS 266 (694)
Q Consensus 210 ~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~--~~~~-~l~~~g~v~~wG~~ 266 (694)
..|-......+. ..........+..++... ...+ .-..++.|++|-..
T Consensus 207 ~~wd~~~~~~~~---------~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~ 257 (357)
T 4g56_B 207 LLWDTRKPKPAT---------RIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIK 257 (357)
T ss_dssp EECCTTSSSCBC---------BCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESS
T ss_pred EEEECCCCceee---------eeeeccccccccchhhhhcccceEEEeecccceeEEECC
Confidence 998432111000 001111123466666542 2333 33678889988643
No 61
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=37.47 E-value=2.4e+02 Score=26.83 Aligned_cols=16 Identities=25% Similarity=0.220 Sum_probs=12.0
Q ss_pred EEEEEeCCeEEEEECC
Q psy14091 42 HVALVRNRRVHTWGSS 57 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~n 57 (694)
|.+...+++||++|-.
T Consensus 95 ~~~~~~~~~iyv~GG~ 110 (306)
T 3ii7_A 95 LAACAAEGKIYTSGGS 110 (306)
T ss_dssp CEEEEETTEEEEECCB
T ss_pred eeEEEECCEEEEECCC
Confidence 4555569999999854
No 62
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=37.30 E-value=2.9e+02 Score=26.56 Aligned_cols=15 Identities=13% Similarity=0.211 Sum_probs=12.1
Q ss_pred EEEEEeCCeEEEEEC
Q psy14091 42 HVALVRNRRVHTWGS 56 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~ 56 (694)
|.+...+++||++|-
T Consensus 50 ~~~~~~~~~lyv~GG 64 (318)
T 2woz_A 50 SSIVTQQNQVYVVGG 64 (318)
T ss_dssp EEEECSSSCEEEEES
T ss_pred eEEEEECCEEEEECC
Confidence 466667999999996
No 63
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=35.45 E-value=5e+02 Score=28.77 Aligned_cols=111 Identities=14% Similarity=0.056 Sum_probs=62.3
Q ss_pred CcEEEEEec----CceEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeC----CcEEEEEEcCC
Q psy14091 136 IRVVSISAG----QYHSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGG----HAHSIALTKAG 207 (694)
Q Consensus 136 ~~i~~i~~G----~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G----~~~~~~lt~~G 207 (694)
..|..++.. ....+.-..||.|+.|-.... ...+..........|..++.. ....+.-..+|
T Consensus 54 ~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~----------~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg 123 (753)
T 3jro_A 54 GPVWRVDWAHPKFGTILASCSYDGKVLIWKEENG----------RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDG 123 (753)
T ss_dssp SCEEEEEECCTTSCSEEEEEETTSCEEEEEEETT----------EEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTS
T ss_pred CceEEEEecCCCCCCEEEEEeCCCeEEEEECCCC----------cccccccccCCCCCeEEEEECCCCCCCEEEEEeCCC
Confidence 347777764 445666678999999963220 000111111123357777665 34566677899
Q ss_pred eEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEcc---------------CeEEEEecCCcEEEecC
Q psy14091 208 RVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGY---------------FHNLALGTSNRLYTWGS 265 (694)
Q Consensus 208 ~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~---------------~~~~~l~~~g~v~~wG~ 265 (694)
.|..|-...... .....+......|..++... ...+.-..+|.|+.|-.
T Consensus 124 ~I~vwdl~~~~~---------~~~~~~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~ 187 (753)
T 3jro_A 124 KVSVVEFKENGT---------TSPIIIDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKY 187 (753)
T ss_dssp EEEEEECCSSSC---------CCCEEEECCSSCEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEE
T ss_pred cEEEEEeecCCC---------cceeEeecCCCceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEec
Confidence 999996542211 11222223344566666543 45556678899999854
No 64
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=35.15 E-value=3e+02 Score=26.16 Aligned_cols=16 Identities=19% Similarity=0.204 Sum_probs=12.0
Q ss_pred EEEEEeCCeEEEEECC
Q psy14091 42 HVALVRNRRVHTWGSS 57 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~n 57 (694)
|.+...+++||++|-.
T Consensus 49 ~~~~~~~~~lyv~GG~ 64 (306)
T 3ii7_A 49 AACVFWDNVVYILGGS 64 (306)
T ss_dssp CEEEEETTEEEEECCB
T ss_pred eEEEEECCEEEEEeCC
Confidence 4555569999999954
No 65
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=34.61 E-value=3.1e+02 Score=26.21 Aligned_cols=22 Identities=0% Similarity=0.157 Sum_probs=12.5
Q ss_pred EEEecCceeEEEccCCc-EEEEc
Q psy14091 432 HITCGGDFSLAMDESGK-VWAWG 453 (694)
Q Consensus 432 ~Ia~G~~ht~alt~~G~-vy~wG 453 (694)
.+..+....++++.+|+ +|.-.
T Consensus 268 ~~~~~~~~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 268 KVAAPESLAVLFNPARNEAYVTH 290 (353)
T ss_dssp EEECSSCCCEEEETTTTEEEEEE
T ss_pred EEEcCCCceEEECCCCCEEEEEE
Confidence 33344445677777776 56543
No 66
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=33.42 E-value=1.5e+02 Score=28.60 Aligned_cols=60 Identities=12% Similarity=0.124 Sum_probs=30.1
Q ss_pred cEEEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEe----CCCeEEEEeCCC-eEEEeC
Q psy14091 41 YHVALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVAC----GRLHTLVLTSSG-VYAWGS 110 (694)
Q Consensus 41 ~~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~----G~~h~~~l~~~G-vy~wG~ 110 (694)
.|.+...+++||++|-.... +. ..-..+..+.....+...+.. -..|+++. .++ +|.+|-
T Consensus 102 ~~~~~~~~~~iyv~GG~~~~----~~-----~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~-~~~~iyv~GG 166 (318)
T 2woz_A 102 LFGLGEVDDKIYVVAGKDLQ----TE-----ASLDSVLCYDPVAAKWSEVKNLPIKVYGHNVIS-HNGMIYCLGG 166 (318)
T ss_dssp SCEEEEETTEEEEEEEEBTT----TC-----CEEEEEEEEETTTTEEEEECCCSSCEESCEEEE-ETTEEEEECC
T ss_pred ccceEEECCEEEEEcCccCC----CC-----cccceEEEEeCCCCCEeECCCCCCcccccEEEE-ECCEEEEEcC
Confidence 34555568999999953210 00 011122223322223444321 13566666 466 999995
No 67
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=33.35 E-value=3.2e+02 Score=25.87 Aligned_cols=16 Identities=13% Similarity=-0.101 Sum_probs=11.8
Q ss_pred EEEEEeCCeEEEEECC
Q psy14091 42 HVALVRNRRVHTWGSS 57 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~n 57 (694)
|.+...+++||++|-.
T Consensus 106 ~~~~~~~~~lyv~GG~ 121 (301)
T 2vpj_A 106 AGATTLGDMIYVSGGF 121 (301)
T ss_dssp CEEEEETTEEEEECCB
T ss_pred eeEEEECCEEEEEccc
Confidence 4555568999999853
No 68
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=32.89 E-value=4e+02 Score=26.91 Aligned_cols=156 Identities=5% Similarity=-0.005 Sum_probs=82.7
Q ss_pred EEEEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCc-eEEEEEcCCcEEEEeCCC
Q psy14091 87 VSSVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQY-HSLAITSQGKLYTWGWGV 164 (694)
Q Consensus 87 i~~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~-~s~~lt~~G~v~~wG~n~ 164 (694)
+..++......+.-..|| |..|-.... + ....+.. ....|..++.... ..+.-..||.|..|-...
T Consensus 125 ~~~~~~~~~~l~sgs~dg~i~vwd~~~~-~----------~~~~~~~-h~~~V~~l~~~~~~~l~s~s~dg~i~vwd~~~ 192 (464)
T 3v7d_B 125 ITCLQFEDNYVITGADDKMIRVYDSINK-K----------FLLQLSG-HDGGVWALKYAHGGILVSGSTDRTVRVWDIKK 192 (464)
T ss_dssp EEEEEEETTEEEEEETTSCEEEEETTTT-E----------EEEEECC-CSSCEEEEEECSTTEEEEEETTSCEEEEETTT
T ss_pred EEEEEECCCEEEEEcCCCcEEEEECCCC-c----------EEEEEeC-CCcCEEEEEEcCCCEEEEEeCCCCEEEEECCC
Confidence 455666666667778889 999964321 1 0111111 1234777765543 455567889999996432
Q ss_pred CCCCCCCCCCCCCCCEEecccCCceEEEEEeC----CcEEEEEEcCCeEEEEeCCCCcccCCCCCCC---------ccc-
Q psy14091 165 HGQLGLNTVEDMSEPQLVKALEHEVIISAKGG----HAHSIALTKAGRVWAFGSGIFGQLGTGSNTK---------HKV- 230 (694)
Q Consensus 165 ~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G----~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~---------~~~- 230 (694)
.. ....+.. ....|..++.- ....+.-..||.|..|-.............. ...
T Consensus 193 ~~-----------~~~~~~~-h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 260 (464)
T 3v7d_B 193 GC-----------CTHVFEG-HNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENP 260 (464)
T ss_dssp TE-----------EEEEECC-CSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCT
T ss_pred Cc-----------EEEEECC-CCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCe
Confidence 10 1111111 12335554432 2455666789999999655332221100000 000
Q ss_pred --ceeeccCCCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 231 --PIELYGLPEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 231 --p~~~~~~~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
......-...+..++......+.-..+|.|++|-..
T Consensus 261 ~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~ 298 (464)
T 3v7d_B 261 YFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVA 298 (464)
T ss_dssp TEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETT
T ss_pred EEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECC
Confidence 011122334677777777777888889999999654
No 69
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=30.87 E-value=3.5e+02 Score=25.66 Aligned_cols=158 Identities=9% Similarity=-0.057 Sum_probs=80.8
Q ss_pred cEEEEEeCC--CeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEec--Cc-eEEEEEcCCcEEE
Q psy14091 86 DVSSVACGR--LHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAG--QY-HSLAITSQGKLYT 159 (694)
Q Consensus 86 ~i~~v~~G~--~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G--~~-~s~~lt~~G~v~~ 159 (694)
.|..++... ...++-..+| |+.|-...... ...+..+. .....|..++.. .. ..++-..+|.|+.
T Consensus 13 ~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~--------~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~ 83 (342)
T 1yfq_A 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAK--------NVDLLQSL-RYKHPLLCCNFIDNTDLQIYVGTVQGEILK 83 (342)
T ss_dssp CEEEEEEEGGGTEEEEEETTSEEEEEEEETTTT--------EEEEEEEE-ECSSCEEEEEEEESSSEEEEEEETTSCEEE
T ss_pred cEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCc--------cccceeee-ecCCceEEEEECCCCCcEEEEEcCCCeEEE
Confidence 455655443 3444556788 88886432210 00011111 112345555543 44 5666678899999
Q ss_pred EeCCCCCCCCCCCCCCCCCCEEeccc-CCceEEEEEeC-CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccC
Q psy14091 160 WGWGVHGQLGLNTVEDMSEPQLVKAL-EHEVIISAKGG-HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGL 237 (694)
Q Consensus 160 wG~n~~gqlg~~~~~~~~~p~~v~~~-~~~~i~~i~~G-~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~ 237 (694)
|-....++ ...+... ....|..++.. ....+.-..+|.|+.|-...... ........+......
T Consensus 84 wd~~~~~~-----------~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~~ 149 (342)
T 1yfq_A 84 VDLIGSPS-----------FQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGD---GVIAVKNLNSNNTKV 149 (342)
T ss_dssp ECSSSSSS-----------EEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTT---BCEEEEESCSSSSSS
T ss_pred EEeccCCc-----------eEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEccccccc---ccccccCCeeeEEee
Confidence 95311111 1222220 22345555543 55666677899999994321000 000000111111123
Q ss_pred CCCeEEEEEccCeEEEEecCCcEEEecCC
Q psy14091 238 PEPISMIATGYFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 238 ~~~i~~i~~g~~~~~~l~~~g~v~~wG~~ 266 (694)
...|..++...+..++...+|.|+.|-..
T Consensus 150 ~~~v~~~~~~~~~l~~~~~d~~i~i~d~~ 178 (342)
T 1yfq_A 150 KNKIFTMDTNSSRLIVGMNNSQVQWFRLP 178 (342)
T ss_dssp CCCEEEEEECSSEEEEEESTTEEEEEESS
T ss_pred CCceEEEEecCCcEEEEeCCCeEEEEECC
Confidence 45788888887777777889999999754
No 70
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=30.31 E-value=4e+02 Score=26.06 Aligned_cols=186 Identities=11% Similarity=0.021 Sum_probs=90.3
Q ss_pred eEEeee-cCcE-EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeee-eecCCCCcEEEEEeCC--CeEEEEeCCC-eE
Q psy14091 33 EVPLSG-GFYH-VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVV-WFRNNKIDVSSVACGR--LHTLVLTSSG-VY 106 (694)
Q Consensus 33 i~~v~~-G~~~-~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~-~~~~~~~~i~~v~~G~--~h~~~l~~~G-vy 106 (694)
|..++- .... +.-..||.|..|=..... ...... .+......|..|+... .+.+.-..|| |.
T Consensus 85 v~~~~~s~d~~l~~~s~dg~v~lWd~~~~~------------~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~ 152 (344)
T 4gqb_B 85 VADLTWVGERGILVASDSGAVELWELDENE------------TLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIK 152 (344)
T ss_dssp EEEEEEETTTEEEEEETTSEEEEEEECTTS------------SCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred EEEEEEeCCCeEEEEECCCEEEEEeccCCC------------ceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEE
Confidence 555542 3333 444568999999543211 111111 1112233566666543 3344445677 88
Q ss_pred EEeCCCCCccCCCCCCCCCccEEcCCCC--CCcEEEEEecCc---eEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEE
Q psy14091 107 AWGSSQYGQLGIGLIDQSPHPRIIPALA--NIRVVSISAGQY---HSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQL 181 (694)
Q Consensus 107 ~wG~n~~gqLG~~~~~~~~~p~~v~~~~--~~~i~~i~~G~~---~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~ 181 (694)
.|-... + +.+..+. ...|..++.... ..+.-..||.|..|=...... ...
T Consensus 153 iwd~~~-~-------------~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~-----------~~~ 207 (344)
T 4gqb_B 153 VWDLAQ-Q-------------VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKP-----------ASQ 207 (344)
T ss_dssp EEETTT-T-------------EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSC-----------EEE
T ss_pred EEECCC-C-------------cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccce-----------eee
Confidence 885322 1 1121121 234667766433 223346789999995322110 011
Q ss_pred ec-ccCCceEEEEEeC---CcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEcc---CeEEEE
Q psy14091 182 VK-ALEHEVIISAKGG---HAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGY---FHNLAL 254 (694)
Q Consensus 182 v~-~~~~~~i~~i~~G---~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~---~~~~~l 254 (694)
+. ......+..++.. ....+.-..||.|..|-... ++ ....+..-...|..++... .+.+.-
T Consensus 208 ~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~-~~----------~~~~~~~h~~~v~~v~fsp~g~~~lasg 276 (344)
T 4gqb_B 208 IGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS-TS----------CVLSSAVHSQCVTGLVFSPHSVPFLASL 276 (344)
T ss_dssp CC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-------------CCEEEECCSSCEEEEEECSSSSCCEEEE
T ss_pred eecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC-Cc----------EEEEEcCCCCCEEEEEEccCCCeEEEEE
Confidence 11 1112235555543 22333346789999994321 11 1112223345688887653 334445
Q ss_pred ecCCcEEEecCC
Q psy14091 255 GTSNRLYTWGSS 266 (694)
Q Consensus 255 ~~~g~v~~wG~~ 266 (694)
..||.|++|-..
T Consensus 277 s~D~~i~vwd~~ 288 (344)
T 4gqb_B 277 SEDCSLAVLDSS 288 (344)
T ss_dssp ETTSCEEEECTT
T ss_pred eCCCeEEEEECC
Confidence 789999999654
No 71
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=29.61 E-value=4.1e+02 Score=25.97 Aligned_cols=157 Identities=8% Similarity=-0.003 Sum_probs=78.8
Q ss_pred eeeeeecCCCCcEEEEEeCCC---eEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcC-CCCCCcEEEEEecC---c
Q psy14091 75 EPVVWFRNNKIDVSSVACGRL---HTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIP-ALANIRVVSISAGQ---Y 146 (694)
Q Consensus 75 ~~i~~~~~~~~~i~~v~~G~~---h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~-~~~~~~i~~i~~G~---~ 146 (694)
..+..+......|..++.... ..+.-..|| |..|=... ++ ....+. ......+..++... .
T Consensus 160 ~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~-~~----------~~~~~~~~~~~~~~~~~~~~p~~~~ 228 (344)
T 4gqb_B 160 VVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRC-PK----------PASQIGCSAPGYLPTSLAWHPQQSE 228 (344)
T ss_dssp EEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTS-SS----------CEEECC----CCCEEEEEECSSCTT
T ss_pred cEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccc-cc----------eeeeeecceeeccceeeeecCCCCc
Confidence 344444444446777776443 223345688 88884321 11 011111 11223355555432 2
Q ss_pred eEEEEEcCCcEEEEeCCCCCCCCCCCCCCCCCCEEecccCCceEEEEEeC---CcEEEEEEcCCeEEEEeCCCCcccCCC
Q psy14091 147 HSLAITSQGKLYTWGWGVHGQLGLNTVEDMSEPQLVKALEHEVIISAKGG---HAHSIALTKAGRVWAFGSGIFGQLGTG 223 (694)
Q Consensus 147 ~s~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~i~~G---~~~~~~lt~~G~v~~wG~n~~gqlg~~ 223 (694)
..+.-..||.|..|=.... + ....+.. ....|..|+.. ..+.+.-..||.|+.|-.. .++
T Consensus 229 ~l~sg~~dg~v~~wd~~~~-~----------~~~~~~~-h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~-~~~---- 291 (344)
T 4gqb_B 229 VFVFGDENGTVSLVDTKST-S----------CVLSSAV-HSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSS-LSE---- 291 (344)
T ss_dssp EEEEEETTSEEEEEESCC-------------CCEEEEC-CSSCEEEEEECSSSSCCEEEEETTSCEEEECTT-CCE----
T ss_pred ceEEeccCCcEEEEECCCC-c----------EEEEEcC-CCCCEEEEEEccCCCeEEEEEeCCCeEEEEECC-CCc----
Confidence 2333467899999953221 1 1112221 12347777764 2344445689999999432 122
Q ss_pred CCCCcccceeeccCCCCeEEEEEccC--eEE-EEecCCcEEEecCC
Q psy14091 224 SNTKHKVPIELYGLPEPISMIATGYF--HNL-ALGTSNRLYTWGSS 266 (694)
Q Consensus 224 ~~~~~~~p~~~~~~~~~i~~i~~g~~--~~~-~l~~~g~v~~wG~~ 266 (694)
......-...|..++...+ ..+ .-..||.|..|--.
T Consensus 292 -------~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~ 330 (344)
T 4gqb_B 292 -------LFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVP 330 (344)
T ss_dssp -------EEEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC
T ss_pred -------EEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECC
Confidence 1222333456888876532 223 24679999999754
No 72
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=27.32 E-value=4.5e+02 Score=25.77 Aligned_cols=179 Identities=9% Similarity=0.007 Sum_probs=0.0
Q ss_pred cCcEEEEEeCCeEEEEECCCCCccCCCCCCCccC------CCeeeeeecCCCCcEEEEEeCCC---eEEEEeCCC-eEEE
Q psy14091 39 GFYHVALVRNRRVHTWGSSSYGALGNGPTMSQIS------EPEPVVWFRNNKIDVSSVACGRL---HTLVLTSSG-VYAW 108 (694)
Q Consensus 39 G~~~~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~------~p~~i~~~~~~~~~i~~v~~G~~---h~~~l~~~G-vy~w 108 (694)
+...+....||.|+.|-... .. .+..+.........|..++.... ..+.-..+| |..|
T Consensus 126 ~~~l~s~~~dg~v~iwd~~~------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iw 193 (416)
T 2pm9_A 126 DNVLASGGNNGEIFIWDMNK------------CTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIW 193 (416)
T ss_dssp TTBEEEECSSSCEEBCBTTT------------TSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEE
T ss_pred CCEEEEEcCCCeEEEEECCC------------CccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEE
Q ss_pred eCCCCCccCCCCCCCCCccEEcCCCC------CCcEEEEEecCc---eEEEEEcCC---cEEEEeCCCCCCCCCCCCCCC
Q psy14091 109 GSSQYGQLGIGLIDQSPHPRIIPALA------NIRVVSISAGQY---HSLAITSQG---KLYTWGWGVHGQLGLNTVEDM 176 (694)
Q Consensus 109 G~n~~gqLG~~~~~~~~~p~~v~~~~------~~~i~~i~~G~~---~s~~lt~~G---~v~~wG~n~~gqlg~~~~~~~ 176 (694)
-... ..+....... ...|..++.... ..+.-..+| .|+.| +....
T Consensus 194 d~~~------------~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~-----------d~~~~ 250 (416)
T 2pm9_A 194 DLKA------------KKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIW-----------DLRNA 250 (416)
T ss_dssp ETTT------------TEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEE-----------ETTST
T ss_pred ECCC------------CCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCceEEEE-----------eCCCC
Q ss_pred CCCEEecc-cCCceEEEEEe---CCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEcc---C
Q psy14091 177 SEPQLVKA-LEHEVIISAKG---GHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGY---F 249 (694)
Q Consensus 177 ~~p~~v~~-~~~~~i~~i~~---G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~---~ 249 (694)
..+..... .....|..++. .....+.-..||.|+.| +.........+......|..++... .
T Consensus 251 ~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~w-----------d~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 319 (416)
T 2pm9_A 251 NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW-----------NPESAEQLSQFPARGNWCFKTKFAPEAPD 319 (416)
T ss_dssp TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEE-----------CSSSCCEEEEEECSSSCCCCEEECTTCTT
T ss_pred CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEe-----------eCCCCccceeecCCCCceEEEEECCCCCC
Q ss_pred eEEEEecCCcEEEe
Q psy14091 250 HNLALGTSNRLYTW 263 (694)
Q Consensus 250 ~~~~l~~~g~v~~w 263 (694)
..+.-..+|.|.+|
T Consensus 320 ~l~s~~~d~~i~iw 333 (416)
T 2pm9_A 320 LFACASFDNKIEVQ 333 (416)
T ss_dssp EEEECCSSSEEEEE
T ss_pred EEEEEecCCcEEEE
No 73
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=25.70 E-value=4.9e+02 Score=25.64 Aligned_cols=152 Identities=10% Similarity=0.059 Sum_probs=79.9
Q ss_pred EEeCCCeEEEE---eCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEec---CceEEEEEcCCcEEEEeC
Q psy14091 90 VACGRLHTLVL---TSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAG---QYHSLAITSQGKLYTWGW 162 (694)
Q Consensus 90 v~~G~~h~~~l---~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G---~~~s~~lt~~G~v~~wG~ 162 (694)
+++...+..++ ..+| |+.|-....|++.. ..+ .+.. -...|..++.. ....+.-..||.|..|-.
T Consensus 40 ~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~------~~~-~~~~-h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~ 111 (402)
T 2aq5_A 40 CAVNPKFMALICEASGGGAFLVLPLGKTGRVDK------NVP-LVCG-HTAPVLDIAWCPHNDNVIASGSEDCTVMVWEI 111 (402)
T ss_dssp EEECSSEEEEEBCCSSSCCEEEEETTCCEECCT------TCC-CBCC-CSSCEEEEEECTTCTTEEEEEETTSEEEEEEC
T ss_pred EEECCCeEEEEEEEcCCCEEEEEECccCCCCCC------CCc-eEec-CCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEc
Confidence 55555555554 3467 98897655544310 000 1111 12347777764 345555567999999975
Q ss_pred CCCCCCCCCCCCCCCCC-EEecccCCceEEEEEeCCc---EEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceee--cc
Q psy14091 163 GVHGQLGLNTVEDMSEP-QLVKALEHEVIISAKGGHA---HSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIEL--YG 236 (694)
Q Consensus 163 n~~gqlg~~~~~~~~~p-~~v~~~~~~~i~~i~~G~~---~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~--~~ 236 (694)
...+... ....+ ..+.. ....|..++.... ..+.-..||.|+.|-..... ....+ ..
T Consensus 112 ~~~~~~~-----~~~~~~~~~~~-h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~-----------~~~~~~~~~ 174 (402)
T 2aq5_A 112 PDGGLVL-----PLREPVITLEG-HTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGA-----------AVLTLGPDV 174 (402)
T ss_dssp CTTCCSS-----CBCSCSEEEEC-CSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTE-----------EEEEECTTT
T ss_pred cCCCCcc-----ccCCceEEecC-CCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCC-----------ccEEEecCC
Confidence 4432211 01111 22221 2345766665433 44555679999999543211 11122 23
Q ss_pred CCCCeEEEEEc--cCeEEEEecCCcEEEecCC
Q psy14091 237 LPEPISMIATG--YFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 237 ~~~~i~~i~~g--~~~~~~l~~~g~v~~wG~~ 266 (694)
....|..++.. ....+.-..+|.|++|-..
T Consensus 175 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~ 206 (402)
T 2aq5_A 175 HPDTIYSVDWSRDGALICTSCRDKRVRVIEPR 206 (402)
T ss_dssp CCSCEEEEEECTTSSCEEEEETTSEEEEEETT
T ss_pred CCCceEEEEECCCCCEEEEEecCCcEEEEeCC
Confidence 34567777764 3345555688999999654
No 74
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=24.62 E-value=5e+02 Score=25.36 Aligned_cols=156 Identities=12% Similarity=0.160 Sum_probs=71.0
Q ss_pred cEEEEEeCC--CeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEec--CceEEEEEcCCcEEEE
Q psy14091 86 DVSSVACGR--LHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAG--QYHSLAITSQGKLYTW 160 (694)
Q Consensus 86 ~i~~v~~G~--~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G--~~~s~~lt~~G~v~~w 160 (694)
.|..++... ...+.-..+| |+.|- ..++ ....+.. ....|..++.. ....+....+|.|+.|
T Consensus 110 ~v~~~~~s~~~~~l~~~~~dg~i~i~~--~~~~----------~~~~~~~-~~~~v~~~~~~~~~~~l~~~~~d~~i~iw 176 (425)
T 1r5m_A 110 QVTCLAWSHDGNSIVTGVENGELRLWN--KTGA----------LLNVLNF-HRAPIVSVKWNKDGTHIISMDVENVTILW 176 (425)
T ss_dssp CEEEEEECTTSSEEEEEETTSCEEEEE--TTSC----------EEEEECC-CCSCEEEEEECTTSSEEEEEETTCCEEEE
T ss_pred ceEEEEEcCCCCEEEEEeCCCeEEEEe--CCCC----------eeeeccC-CCccEEEEEECCCCCEEEEEecCCeEEEE
Confidence 566666654 3444556678 88884 2221 1111211 22346666654 3445566778999999
Q ss_pred eCCCCCCCCCCCCCCCCCCEEec----ccCCceEEEEE-eCCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeec
Q psy14091 161 GWGVHGQLGLNTVEDMSEPQLVK----ALEHEVIISAK-GGHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELY 235 (694)
Q Consensus 161 G~n~~gqlg~~~~~~~~~p~~v~----~~~~~~i~~i~-~G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~ 235 (694)
-......+..-.... .....+. ......+..++ ......++...+|.|+.|-..... ....+.
T Consensus 177 d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~-----------~~~~~~ 244 (425)
T 1r5m_A 177 NVISGTVMQHFELKE-TGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKT-----------PTGKLI 244 (425)
T ss_dssp ETTTTEEEEEECCC----------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSS-----------CSEEEC
T ss_pred ECCCCcEEEEeeccc-cCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCc-----------eeeeec
Confidence 653211110000000 0000000 00000011111 112345556678888888544211 111122
Q ss_pred cCCCCeEEEEEc--cCeEEEEecCCcEEEecCC
Q psy14091 236 GLPEPISMIATG--YFHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 236 ~~~~~i~~i~~g--~~~~~~l~~~g~v~~wG~~ 266 (694)
.....|..++.. ....+.-..+|.|++|-..
T Consensus 245 ~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~ 277 (425)
T 1r5m_A 245 GHHGPISVLEFNDTNKLLLSASDDGTLRIWHGG 277 (425)
T ss_dssp CCSSCEEEEEEETTTTEEEEEETTSCEEEECSS
T ss_pred cCCCceEEEEECCCCCEEEEEcCCCEEEEEECC
Confidence 233456666654 3345555678889998654
No 75
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=24.43 E-value=5.3e+02 Score=25.63 Aligned_cols=25 Identities=20% Similarity=0.098 Sum_probs=16.9
Q ss_pred CCeEEEEEccC----eEEEEecCCcEEEe
Q psy14091 239 EPISMIATGYF----HNLALGTSNRLYTW 263 (694)
Q Consensus 239 ~~i~~i~~g~~----~~~~l~~~g~v~~w 263 (694)
+.|..|+.... ..+.-+++|.|.+|
T Consensus 408 ~~I~~i~~~~~~~~~~l~s~~~dG~I~iw 436 (437)
T 3gre_A 408 DIINSISTCEVDETPLLVACDNSGLIGIF 436 (437)
T ss_dssp CCEEEEEEEESSSSEEEEEEETTSCEEEE
T ss_pred cceeeEeeeccCCceEEEEEcCCceEEEe
Confidence 45777666554 44555788888888
No 76
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=22.97 E-value=6.8e+02 Score=26.34 Aligned_cols=27 Identities=7% Similarity=0.140 Sum_probs=15.9
Q ss_pred eEEEEEeC---CcEEEEEEcCCeEEEEeCC
Q psy14091 189 VIISAKGG---HAHSIALTKAGRVWAFGSG 215 (694)
Q Consensus 189 ~i~~i~~G---~~~~~~lt~~G~v~~wG~n 215 (694)
.+..|... ....+.+.++|+|+.|-..
T Consensus 281 ~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~ 310 (543)
T 1nir_A 281 RVAAIIASHEHPEFIVNVKETGKVLLVNYK 310 (543)
T ss_dssp CEEEEEECSSSSEEEEEETTTTEEEEEECT
T ss_pred ceEEEEECCCCCEEEEEECCCCeEEEEEec
Confidence 35555443 3344445578889988654
No 77
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=21.23 E-value=5.3e+02 Score=24.42 Aligned_cols=15 Identities=13% Similarity=-0.022 Sum_probs=11.2
Q ss_pred EEEEEeCCeEEEEEC
Q psy14091 42 HVALVRNRRVHTWGS 56 (694)
Q Consensus 42 ~~~l~~~g~v~~wG~ 56 (694)
|.+...+|+||++|-
T Consensus 115 ~~~~~~~~~iyv~GG 129 (308)
T 1zgk_A 115 IGVGVIDGHIYAVGG 129 (308)
T ss_dssp CEEEEETTEEEEECC
T ss_pred cEEEEECCEEEEEcC
Confidence 445555999999985
No 78
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=21.22 E-value=6.3e+02 Score=25.27 Aligned_cols=253 Identities=10% Similarity=0.070 Sum_probs=0.0
Q ss_pred CCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCccEEcCCCCCCcEEEEEecCc-eEEEEEcCCcEEEEeCCCCCCCCC
Q psy14091 93 GRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHPRIIPALANIRVVSISAGQY-HSLAITSQGKLYTWGWGVHGQLGL 170 (694)
Q Consensus 93 G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p~~v~~~~~~~i~~i~~G~~-~s~~lt~~G~v~~wG~n~~gqlg~ 170 (694)
+....+.-..+| |+.|-.......-...............-....-........ ..+.-..+|.|..|-.......
T Consensus 140 ~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~-- 217 (430)
T 2xyi_A 140 NACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKE-- 217 (430)
T ss_dssp EEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCEEEEETTSCCBG--
T ss_pred CCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeEEEEeCCCCCCC--
Q ss_pred CCCCCCCCCEEecccCCceEEEEEe---CCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEE-
Q psy14091 171 NTVEDMSEPQLVKALEHEVIISAKG---GHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIAT- 246 (694)
Q Consensus 171 ~~~~~~~~p~~v~~~~~~~i~~i~~---G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~- 246 (694)
.....+..........|..|+. +....+....+|.|+.|-.. ..........+......|..|+.
T Consensus 218 ---~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~--------~~~~~~~~~~~~~~~~~v~~i~~~ 286 (430)
T 2xyi_A 218 ---HRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTR--------NNNTSKPSHTVDAHTAEVNCLSFN 286 (430)
T ss_dssp ---GGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETT--------CSCSSSCSEEEECCSSCEEEEEEC
T ss_pred ---CceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECC--------CCCCCcceeEeecCCCCeEEEEeC
Q ss_pred --ccCeEEEEecCCcEEEecCCCcccchhhHHHHHhhhhhcccccccccccccccccccCCCCCCceeeeCCCCCccccc
Q psy14091 247 --GYFHNLALGTSNRLYTWGSSPQVLRSQSQAQKRARMMCYSNQVKNAALAEFSSEVTSPDANNETKIHLAPSPSSASEK 324 (694)
Q Consensus 247 --g~~~~~~l~~~g~v~~wG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (694)
+....+.-..+|.|.+|-...
T Consensus 287 p~~~~~l~tg~~dg~v~vwd~~~--------------------------------------------------------- 309 (430)
T 2xyi_A 287 PYSEFILATGSADKTVALWDLRN--------------------------------------------------------- 309 (430)
T ss_dssp SSCTTEEEEEETTSEEEEEETTC---------------------------------------------------------
T ss_pred CCCCCEEEEEeCCCeEEEEeCCC---------------------------------------------------------
Q ss_pred ccchhhhccccccccccCCCCccccCeeeeccCCCCCeEEEEe---cCceeEEEeCCccEEEEeCCCCCcCCCCCCcCcc
Q psy14091 325 NETAEYASFMQSFLSSADDGMAHMSPTLVDTSHVKAPILQICC---GCHHSMLLSREGRVYTWGRNVDGQLGNGSRKEVH 401 (694)
Q Consensus 325 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~v~~~~~~~~i~~I~~---G~~h~~aLt~~G~vy~wG~n~~GqLG~g~~~~~~ 401 (694)
..............|..|+. |....+.-..+|.|..|-....+..-........
T Consensus 310 -----------------------~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~ 366 (430)
T 2xyi_A 310 -----------------------LKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDG 366 (430)
T ss_dssp -----------------------TTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHC
T ss_pred -----------------------CCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccC
Q ss_pred CCeeEeecccccccccCcCCCCcccCCCeEEEEecCc---eeEEEccCCcEEEE
Q psy14091 402 TPTAISINIVMTSSEVSSDERSPLLSSSIKHITCGGD---FSLAMDESGKVWAW 452 (694)
Q Consensus 402 ~p~~v~~~~~~~~~~~~~~~~~~~~~~~i~~Ia~G~~---ht~alt~~G~vy~w 452 (694)
.|..+.... .....|..++...+ ..+....||.|..|
T Consensus 367 ~~~~~~~~~--------------~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw 406 (430)
T 2xyi_A 367 PPELLFIHG--------------GHTAKISDFSWNPNEPWIICSVSEDNIMQVW 406 (430)
T ss_dssp CTTEEEECC--------------CCSSCEEEEEECSSSTTEEEEEETTSEEEEE
T ss_pred CcceEEEcC--------------CCCCCceEEEECCCCCCEEEEEECCCCEEEe
No 79
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=21.16 E-value=5.3e+02 Score=24.34 Aligned_cols=188 Identities=12% Similarity=-0.029 Sum_probs=97.0
Q ss_pred EEEEeCCeEEEEECCCCCccCCCCCCCccCCCeeeeeecCCCCcEEEEEeC--CC-eEEEEeCCC-eEEEeCCCCCccCC
Q psy14091 43 VALVRNRRVHTWGSSSYGALGNGPTMSQISEPEPVVWFRNNKIDVSSVACG--RL-HTLVLTSSG-VYAWGSSQYGQLGI 118 (694)
Q Consensus 43 ~~l~~~g~v~~wG~n~~GqLG~g~~~~~~~~p~~i~~~~~~~~~i~~v~~G--~~-h~~~l~~~G-vy~wG~n~~gqLG~ 118 (694)
++...||.|+.|-..... ....+.........|..++.. .. ..+.-..+| |+.|-.+..+++
T Consensus 27 ~~~~~d~~v~iw~~~~~~------------~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~-- 92 (342)
T 1yfq_A 27 LITSWDGSLTVYKFDIQA------------KNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSF-- 92 (342)
T ss_dssp EEEETTSEEEEEEEETTT------------TEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSE--
T ss_pred EEEcCCCeEEEEEeCCCC------------ccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCce--
Confidence 445578999999654311 000111111223356666554 34 566667788 999964122221
Q ss_pred CCCCCCCccEEcCCC-CCCcEEEEEec-CceEEEEEcCCcEEEEeCCCCCCCCCCCCCC-CCCCEEecccCCceEEEEEe
Q psy14091 119 GLIDQSPHPRIIPAL-ANIRVVSISAG-QYHSLAITSQGKLYTWGWGVHGQLGLNTVED-MSEPQLVKALEHEVIISAKG 195 (694)
Q Consensus 119 ~~~~~~~~p~~v~~~-~~~~i~~i~~G-~~~s~~lt~~G~v~~wG~n~~gqlg~~~~~~-~~~p~~v~~~~~~~i~~i~~ 195 (694)
..+... ....|..++.. ....+....||.|+.|-...... ..... ...-..+. ....|..++.
T Consensus 93 ---------~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~---~~~~~~~~~~~~~~--~~~~v~~~~~ 158 (342)
T 1yfq_A 93 ---------QALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGD---GVIAVKNLNSNNTK--VKNKIFTMDT 158 (342)
T ss_dssp ---------EECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTT---BCEEEEESCSSSSS--SCCCEEEEEE
T ss_pred ---------EeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEccccccc---ccccccCCeeeEEe--eCCceEEEEe
Confidence 222220 22346666554 55666677899999995321000 00000 00000011 2235777777
Q ss_pred CCcEEEEEEcCCeEEEEeCCCCcccCCCCCCCcccceeeccCCCCeEEEEEcc---CeEEEEecCCcEEEecCC
Q psy14091 196 GHAHSIALTKAGRVWAFGSGIFGQLGTGSNTKHKVPIELYGLPEPISMIATGY---FHNLALGTSNRLYTWGSS 266 (694)
Q Consensus 196 G~~~~~~lt~~G~v~~wG~n~~gqlg~~~~~~~~~p~~~~~~~~~i~~i~~g~---~~~~~l~~~g~v~~wG~~ 266 (694)
..+..++.+.+|.|+.|-....++. ............+..++... ...++-..+|.+.+|-..
T Consensus 159 ~~~~l~~~~~d~~i~i~d~~~~~~~--------~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~ 224 (342)
T 1yfq_A 159 NSSRLIVGMNNSQVQWFRLPLCEDD--------NGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFD 224 (342)
T ss_dssp CSSEEEEEESTTEEEEEESSCCTTC--------CCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECC
T ss_pred cCCcEEEEeCCCeEEEEECCccccc--------cceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEc
Confidence 7777777788999999965431110 01111112334577776643 455556788888888654
No 80
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=20.67 E-value=6e+02 Score=24.86 Aligned_cols=162 Identities=9% Similarity=0.052 Sum_probs=87.5
Q ss_pred EEEeCCCeEEEEeCCC-eEEEeCCCCCccCCCCCCCCCcc--EEcCCCCCCcEEEEEecC-----ceEEEEEcCCcEEEE
Q psy14091 89 SVACGRLHTLVLTSSG-VYAWGSSQYGQLGIGLIDQSPHP--RIIPALANIRVVSISAGQ-----YHSLAITSQGKLYTW 160 (694)
Q Consensus 89 ~v~~G~~h~~~l~~~G-vy~wG~n~~gqLG~~~~~~~~~p--~~v~~~~~~~i~~i~~G~-----~~s~~lt~~G~v~~w 160 (694)
..+....+.+++|+.| +|..-...--.. .....-.| ..++...+.+|+.+.+.. ...+++|++|.+.-.
T Consensus 48 ~~~~t~d~ll~fT~~Gr~y~~~~~~lp~~---~r~~~G~~i~~~l~l~~~e~i~~~~~~~~~~~e~~~v~~T~~G~iKr~ 124 (327)
T 3uc1_A 48 FVCSTHDLILFFTTQGRVYRAKAYDLPEA---SRTARGQHVANLLAFQPEERIAQVIQIRGYTDAPYLVLATRNGLVKKS 124 (327)
T ss_dssp EEEETTSEEEEEETTSEEEEEEGGGSCBC---CSSSCCEEHHHHTTCCTTCCEEEEEEESSTTSSSEEEEEETTSEEEEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEEHHHCcCC---CccCCCEEHHHccCCCCCCEEEEEEEeccCCCCCEEEEEcCCCEEEEe
Confidence 3455667788899999 998764332111 11111112 234444577888877654 467889999999877
Q ss_pred eCCCCCCCCCCCCCCCCCCEEecccCCceEEE--EEeCCcEEEEEEcCCeEEEEeCC--CCcccCCCCCCCcccceeecc
Q psy14091 161 GWGVHGQLGLNTVEDMSEPQLVKALEHEVIIS--AKGGHAHSIALTKAGRVWAFGSG--IFGQLGTGSNTKHKVPIELYG 236 (694)
Q Consensus 161 G~n~~gqlg~~~~~~~~~p~~v~~~~~~~i~~--i~~G~~~~~~lt~~G~v~~wG~n--~~gqlg~~~~~~~~~p~~~~~ 236 (694)
-...+-.... .-...+..-.+..++. ++.+.++.+++|++|++|.+-.. .--.+|........ ..+ .
T Consensus 125 ~l~~~~~~~r------~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~rf~~~~~eip~~gr~a~Gv~~--i~L-~ 195 (327)
T 3uc1_A 125 KLTDFDSNRS------GGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSIRFSATDEALRPMGRATSGVQG--MRF-N 195 (327)
T ss_dssp EGGGGCCCCS------SCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEEEEECCTTTSCCCCTTSBCEES--SCC-C
T ss_pred EHHHhhcccc------CceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEEEEECcccccCcCCcCCCCeee--ecC-C
Confidence 5433221110 0000111112333433 34567789999999999999766 44334433222111 111 1
Q ss_pred CCCCeEEEEEcc--CeEEEEecCCcEEE
Q psy14091 237 LPEPISMIATGY--FHNLALGTSNRLYT 262 (694)
Q Consensus 237 ~~~~i~~i~~g~--~~~~~l~~~g~v~~ 262 (694)
-.+.|+.+..-. .+.+.++++|.+.-
T Consensus 196 ~~d~Vv~~~~~~~~~~ll~~T~~G~~Kr 223 (327)
T 3uc1_A 196 IDDRLLSLNVVREGTYLLVATSGGYAKR 223 (327)
T ss_dssp TTCCEEEEEECCTTCEEEEEETTSEEEE
T ss_pred CCCEEEEEEEECCCCEEEEEeCCCcEEE
Confidence 224677665543 35667777776544
Done!