Query psy14094
Match_columns 149
No_of_seqs 113 out of 1072
Neff 7.3
Searched_HMMs 13730
Date Fri Aug 16 19:24:08 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14094.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/14094hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2vgls_ d.110.4.2 (S:) Sigma2 100.0 5.1E-44 3.7E-48 259.2 19.7 142 7-148 1-142 (142)
2 d2vglm2 d.110.4.2 (M:1-141) Mu 100.0 1.1E-40 7.7E-45 240.8 15.0 135 7-144 1-136 (141)
3 d3cpta1 d.110.7.1 (A:3-118) ME 96.1 0.087 6.3E-06 34.8 12.0 93 7-99 16-114 (116)
4 d1ifqa_ d.110.4.1 (A:) Sec22b 95.1 0.14 1E-05 34.1 9.8 48 56-103 54-101 (127)
5 d1ioua_ d.110.4.1 (A:) Synapto 93.5 0.58 4.2E-05 31.2 10.3 94 8-101 3-105 (140)
6 d2fh5a1 d.110.4.4 (A:1-129) Si 92.2 0.98 7.1E-05 29.9 10.2 90 7-102 1-95 (129)
7 d1vetb_ d.110.7.1 (B:) Late en 69.0 11 0.00079 23.7 13.5 93 6-98 17-116 (118)
8 d2j3wa1 d.110.4.3 (A:1-140) Se 64.0 16 0.0011 23.7 11.1 93 10-103 6-112 (140)
9 d1zofa1 c.47.1.10 (A:1-170) Th 49.2 13 0.00092 24.6 4.8 21 8-28 123-143 (170)
10 d1nrja_ d.110.4.4 (A:) Srx dom 43.0 40 0.0029 22.1 8.0 74 7-80 1-94 (155)
11 d1hzta_ d.113.1.2 (A:) Isopent 35.3 11 0.00084 24.3 2.6 15 10-24 6-20 (153)
12 d1nvpd1 a.32.1.1 (D:3-53) Smal 33.5 22 0.0016 19.3 3.1 15 116-130 13-27 (51)
13 d1jkna_ d.113.1.1 (A:) Diadeno 33.4 12 0.00091 24.2 2.6 16 10-25 18-33 (165)
14 d1z05a1 a.4.5.63 (A:10-80) Tra 32.9 14 0.0011 20.6 2.5 34 102-135 19-56 (71)
15 d1dpua_ a.4.5.16 (A:) C-termin 32.5 14 0.0011 21.2 2.4 21 112-132 37-57 (69)
16 d1z6ra1 a.4.5.63 (A:12-81) Mlc 31.8 8.9 0.00065 21.7 1.4 33 103-135 19-55 (70)
17 d2hoea1 a.4.5.63 (A:10-71) N-a 31.5 9.2 0.00067 21.3 1.3 32 103-134 12-47 (62)
18 d1nh2d1 a.32.1.1 (D:5-54) Smal 30.3 27 0.002 18.8 3.1 28 116-146 15-42 (50)
19 d1sxjd1 a.80.1.1 (D:263-353) R 29.1 22 0.0016 20.7 3.0 31 110-140 15-45 (91)
20 d2zcta1 c.47.1.10 (A:6-242) Pe 28.3 25 0.0019 24.7 3.7 35 7-41 119-156 (237)
21 d1xcca_ c.47.1.10 (A:) 1-Cys p 27.5 23 0.0017 24.6 3.3 35 7-41 126-163 (219)
22 d1prxa_ c.47.1.10 (A:) 1-Cys p 24.6 33 0.0024 23.6 3.7 24 7-30 126-149 (220)
23 d1z5ye1 c.47.1.10 (E:49-184) T 23.1 59 0.0043 19.6 4.5 16 8-23 95-110 (136)
24 d1sjya_ d.113.1.1 (A:) Hypothe 22.2 27 0.002 21.9 2.6 19 8-26 14-32 (158)
25 d1y88a1 a.60.4.3 (A:128-186) H 20.5 15 0.0011 19.8 0.8 17 118-134 11-27 (59)
No 1
>d2vgls_ d.110.4.2 (S:) Sigma2 adaptin (clathrin coat assembly protein AP17) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=100.00 E-value=5.1e-44 Score=259.16 Aligned_cols=142 Identities=45% Similarity=0.864 Sum_probs=137.7
Q ss_pred hhceeEEEeCCCCEEEEecCCCCChhhHHHHHHHHHHHhhccCCCccceeEeCCEEEEEEEeCcEEEEEEecCCCCHHHH
Q psy14094 7 NMQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTILARKPKMCSFLEWKDVKIVYKRYASLYFCCAIEQNDNELLT 86 (149)
Q Consensus 7 mi~~i~iln~~G~~ll~k~y~~~~~~~~~~~~~~~~~~~~~~~~~~~pi~~~~~~~~vy~~~~~Lyfv~v~~~~~n~l~i 86 (149)
||++++|+|++|+++++|||++...++++++++++++++.++++..+|++++++++++|++++||||++++++|+||+++
T Consensus 1 MI~~i~i~n~~G~~~l~K~Y~~~~~~~~~~~~~~~~~~i~~~~~~~~~i~~~~~~~~vy~~~~~l~~v~~~~~~~n~l~~ 80 (142)
T d2vgls_ 1 MIRFILIQNRAGKTRLAKWYMQFDDDEKQKLIEEVHAVVTVRDAKHTNFVEFRNFKIIYRRYAGLYFCICVDVNDNNLAY 80 (142)
T ss_dssp CEEEEEEEETTSCEEEEEECSCCCHHHHHHHHHHHHHHHHTCCTTSCSEEEETTEEEEEEEETTEEEEEEECTTSCHHHH
T ss_pred CeEEEEEEcCCCCEEEEEeCCCCCHHHHHHHHHHHHHHhhcCCCCCCceEEECCEEEEEEEECCEEEEEEECCCccHHHH
Confidence 89999999999999999999999899999999999999888777789999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcccCHHHHHhcHHHHHHHHHHHHhCcEeeecCHHHHHHHHHHHhhhc
Q psy14094 87 LEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLLGGEIQETSKKNVLKAIAAQDLLQ 148 (149)
Q Consensus 87 le~L~~lv~~l~~yf~~v~E~~i~~Nf~~v~~llDE~id~G~~~~Td~~~i~~~i~~~~~~~ 148 (149)
+++|+++++++++|||+++|+++++||++||++|||++|+|+|++|+++.|++++.++++.+
T Consensus 81 ~e~L~~~~~~l~~~~~~~~e~~i~~n~~~v~~~lDE~id~G~~~et~~~~Il~~~~~~~~~e 142 (142)
T d2vgls_ 81 LEAIHNFVEVLNEYFHNVCELDLVFNFYKVYTVVDEMFLAGEIRETSQTKVLKQLLMLQSLE 142 (142)
T ss_dssp HHHHHHHHHHHHHHTTSCCHHHHHHTHHHHHHHHHHHEETTEECCCCHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHcccCHHHHHhHHHHHHHHHHHHHhCCeeEeCCHHHHHHHHHHhhccC
Confidence 99999999999999999999999999999999999999999999999999999999999864
No 2
>d2vglm2 d.110.4.2 (M:1-141) Mu2 adaptin (clathrin coat assembly protein AP50) {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=100.00 E-value=1.1e-40 Score=240.79 Aligned_cols=135 Identities=18% Similarity=0.312 Sum_probs=121.1
Q ss_pred hhceeEEEeCCCCEEEEecCCCCChhhHHHHHHHHHHHhh-ccCCCccceeEeCCEEEEEEEeCcEEEEEEecCCCCHHH
Q psy14094 7 NMQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTIL-ARKPKMCSFLEWKDVKIVYKRYASLYFCCAIEQNDNELL 85 (149)
Q Consensus 7 mi~~i~iln~~G~~ll~k~y~~~~~~~~~~~~~~~~~~~~-~~~~~~~pi~~~~~~~~vy~~~~~Lyfv~v~~~~~n~l~ 85 (149)
||+|+||+|++|+++++|+|+++.++...+ .+++.+. .++...+|++.+++++|+|+++++|||+++++.|+||++
T Consensus 1 MI~~i~Iln~~G~~l~~r~y~~~~~~~~~~---~f~~~~~~~~~~~~~pi~~~~~~~~~~~~~~~l~~v~v~~~~~n~l~ 77 (141)
T d2vglm2 1 MIGGLFIYNHKGEVLISRVYRDDIGRNAVD---AFRVNVIHARQQVRSPVTNIARTSFFHVKRSNIWLAAVTKQNVNAAM 77 (141)
T ss_dssp CCCEEEEECTTCCEEEEEECSSSCCHHHHH---HHHHHTTTCSSCCCCSEEEETTEEEEEEEETTEEEEEEESSCCCHHH
T ss_pred CceEEEEEcCCCCEEEEEecCCCCChHHHH---HHHHHHHhccccCCCCeEEECCEEEEEEEECCEEEEEEecCCCCHHH
Confidence 899999999999999999999886654422 3334433 333456899999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccCHHHHHhcHHHHHHHHHHHHhCcEeeecCHHHHHHHHHHH
Q psy14094 86 TLEIIHRYVELLDKYFGSVCELDIIFNFEKAYFILDELLLGGEIQETSKKNVLKAIAAQ 144 (149)
Q Consensus 86 ile~L~~lv~~l~~yf~~v~E~~i~~Nf~~v~~llDE~id~G~~~~Td~~~i~~~i~~~ 144 (149)
++++||+++++|++|||+++|++|++||++||++|||++|+|+||+||++.|+++|+.+
T Consensus 78 ~~e~L~~~~~~l~~y~~~~~e~~i~~n~~~v~~lLDE~id~G~p~~t~~~~l~~~i~~~ 136 (141)
T d2vglm2 78 VFEFLYKMCDVMAAYFGKISEENIKNNFVLIYELLDEILDFGYPQNSETGALKTFITQQ 136 (141)
T ss_dssp HHHHHHHHHHHHHHHHSSCCHHHHHHTHHHHHHHHHHHEETTEECCCCHHHHGGGCCCC
T ss_pred HHHHHHHHHHHHHHHHhhcCHHHHHHhHHHHHHHHHHHHhCCEEEEccHHHHHHHhccC
Confidence 99999999999999999999999999999999999999999999999999999998654
No 3
>d3cpta1 d.110.7.1 (A:3-118) MEK binding partner 1, MP1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=96.14 E-value=0.087 Score=34.76 Aligned_cols=93 Identities=10% Similarity=0.109 Sum_probs=66.4
Q ss_pred hhceeEEEeCCCCEEEEecCCCCCh-hhHHHHHHHHHHHhh-----ccCCCccceeEeCCEEEEEEEeCcEEEEEEecCC
Q psy14094 7 NMQFMLLFSRQGKLRLQKWYVAHPD-KLKKKITRELITTIL-----ARKPKMCSFLEWKDVKIVYKRYASLYFCCAIEQN 80 (149)
Q Consensus 7 mi~~i~iln~~G~~ll~k~y~~~~~-~~~~~~~~~~~~~~~-----~~~~~~~pi~~~~~~~~vy~~~~~Lyfv~v~~~~ 80 (149)
-+.+++|-|++|=++++=.-.+... ..+..+...+-.... .-.....=+..++++.+++-....+++.++++++
T Consensus 16 Gl~~I~iTDrDGVpv~~v~~~~~p~~~~~~~~lstf~~a~dq~sKLglg~~ksii~~Y~~~qvv~~~~~pl~vt~ia~~~ 95 (116)
T d3cpta1 16 GLHAIVVSDRDGVPVIKVANDNAPEHALRPGFLSTFALATDQGSKLGLSKNKSIICYYNTYQVVQFNRLPLVVSFIASSS 95 (116)
T ss_dssp TEEEEEEECTTSCEEEEEECTTSCGGGGSHHHHHHHHHHHHHHHHHTCCCEEEEEEECSSEEEEEEEETTEEEEEEEETT
T ss_pred CeEEEEEEcCCCcEEEEecCCCChhhhcchHHHHHHHHHHHhhcccCCCCCcEEEEEecCeEEEEEecCceEEEEEecCC
Confidence 4789999999999998776554433 222234433322211 1111223456789999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHH
Q psy14094 81 DNELLTLEIIHRYVELLDK 99 (149)
Q Consensus 81 ~n~l~ile~L~~lv~~l~~ 99 (149)
.|.-+++.+-+.+..+|+.
T Consensus 96 aNtG~Il~l~~~l~~~L~~ 114 (116)
T d3cpta1 96 ANTGLIVSLEKELAPLFEE 114 (116)
T ss_dssp SCHHHHHHHHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHhh
Confidence 9999999998888877764
No 4
>d1ifqa_ d.110.4.1 (A:) Sec22b {Mouse (Mus musculus) [TaxId: 10090]}
Probab=95.06 E-value=0.14 Score=34.06 Aligned_cols=48 Identities=15% Similarity=0.144 Sum_probs=43.2
Q ss_pred eEeCCEEEEEEEeCcEEEEEEecCCCCHHHHHHHHHHHHHHHHHHhcc
Q psy14094 56 LEWKDVKIVYKRYASLYFCCAIEQNDNELLTLEIIHRYVELLDKYFGS 103 (149)
Q Consensus 56 ~~~~~~~~vy~~~~~Lyfv~v~~~~~n~l~ile~L~~lv~~l~~yf~~ 103 (149)
+..+++.|-|...+++.++++++.+.+.-+.+.||..+-+-+..-+++
T Consensus 54 ~~~~~y~fHy~~~~gi~yl~i~d~~~~~~laF~fLeei~~eF~~~y~~ 101 (127)
T d1ifqa_ 54 LEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLHSEFDEQHGK 101 (127)
T ss_dssp EEETTEEEEEEEETTEEEEEEEETTSCHHHHHHHHHHHHHHHHHHHTT
T ss_pred EEECCEEEEEEecCCeEEEEEEccccCchhHHHHHHHHHHHHHHhhhh
Confidence 467999999999999999999999999999999999888888777764
No 5
>d1ioua_ d.110.4.1 (A:) Synaptobrevin homolog 1 ykt6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.47 E-value=0.58 Score=31.23 Aligned_cols=94 Identities=10% Similarity=0.035 Sum_probs=61.1
Q ss_pred hceeEEEeCCC--CEEEEecCCCC-----ChhhHHHHHHHHHHHhhccCCC-ccceeEeCCEEEE-EEEeCcEEEEEEec
Q psy14094 8 MQFMLLFSRQG--KLRLQKWYVAH-----PDKLKKKITRELITTILARKPK-MCSFLEWKDVKIV-YKRYASLYFCCAIE 78 (149)
Q Consensus 8 i~~i~iln~~G--~~ll~k~y~~~-----~~~~~~~~~~~~~~~~~~~~~~-~~pi~~~~~~~~v-y~~~~~Lyfv~v~~ 78 (149)
+-++.|+...+ -+.|+..++=. .....+++...+.+.+..|.+. .--.++.+++.+- |++.+||.++++++
T Consensus 3 l~~~~v~~~~~~~~~~L~~a~Dlssf~ffqR~svkE~~~f~sr~i~~Rt~~g~r~sv~~~~y~~h~yv~~~gl~~l~i~d 82 (140)
T d1ioua_ 3 IYYIGVFRSGGEKALELSEVKDLSQFGFFERSSVGQFMTFFAETVASRTGAGERQSIEEGNYIGHVYARSEGICGVLITD 82 (140)
T ss_dssp CCEEEEEEEETTEEEEEEEEECCSSCCTTHHHHHHHHHHHHHHHHHHHCCSSSEEEEEETTEEEEEECCSSSCEEEEEBC
T ss_pred EEEEEEEEcCCCCcEEEeeeccccccceeehHhHHHHHHHHHHHHhhcCCCCceEEEEcCCeEEEEEEeeCCEEEEEEEC
Confidence 44566666433 34566666521 1334455566666666666543 1123567777654 88889999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHh
Q psy14094 79 QNDNELLTLEIIHRYVELLDKYF 101 (149)
Q Consensus 79 ~~~n~l~ile~L~~lv~~l~~yf 101 (149)
.+-+.-..+.+|+.+.+-+..-+
T Consensus 83 ~~Yp~r~AF~~L~~i~~eF~~~~ 105 (140)
T d1ioua_ 83 KQYPVRPAYTLLNKILDEYLVAH 105 (140)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHSS
T ss_pred CCcchHHHHHHHHHHHHHHHHHc
Confidence 99999999999996665554433
No 6
>d2fh5a1 d.110.4.4 (A:1-129) Signal recognition particle receptor alpha subunit, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=92.19 E-value=0.98 Score=29.86 Aligned_cols=90 Identities=16% Similarity=0.171 Sum_probs=57.5
Q ss_pred hhceeEEEeCCCCEEEEe-cCCCCChhhHHHHHHHHHHHhh--ccCCCccceeEeCCEEEEEEEeCc--EEEEEEecCCC
Q psy14094 7 NMQFMLLFSRQGKLRLQK-WYVAHPDKLKKKITRELITTIL--ARKPKMCSFLEWKDVKIVYKRYAS--LYFCCAIEQND 81 (149)
Q Consensus 7 mi~~i~iln~~G~~ll~k-~y~~~~~~~~~~~~~~~~~~~~--~~~~~~~pi~~~~~~~~vy~~~~~--Lyfv~v~~~~~ 81 (149)
||..+.|+++.|=++-+. .+.+....- ...+.+.+. .|.. .+-+.++++++=|+..++ |.|+++-..--
T Consensus 1 MiD~f~IftkGGiVLW~~~~~~~~~~~~----IN~LI~~vlLEER~~--~~~~~~d~y~lkw~~~Ne~~lvfV~vYQ~il 74 (129)
T d2fh5a1 1 MVDFFTIFSKGGLVLWCFQGVSDSCTGP----VNALIRSVLLQERGG--NNSFTHEALTLKYKLDNQFELVFVVGFQKIL 74 (129)
T ss_dssp SCSEEEEEETTSBEEEEEBTTTBSCCCH----HHHHHHHTGGGC---------CCCCCEEEEEEETTTTEEEEEEESCGG
T ss_pred CccEEEEEeCCeEEEEeecCCCcccchh----HHHHHHHhheecccC--CCceeECCEEEEEEEeccCCEEEEEEEhhhh
Confidence 889999999999888873 333322222 334444432 3332 234678999999999885 88999988766
Q ss_pred CHHHHHHHHHHHHHHHHHHhc
Q psy14094 82 NELLTLEIIHRYVELLDKYFG 102 (149)
Q Consensus 82 n~l~ile~L~~lv~~l~~yf~ 102 (149)
+-..+-.+|..+...+.+-++
T Consensus 75 ~l~yvd~lL~~i~~~F~~~y~ 95 (129)
T d2fh5a1 75 TLTYVDKLIDDVHRLFRDKYR 95 (129)
T ss_dssp GHHHHHHHHHHHHHHHHHHTH
T ss_pred chHHHHHHHHHHHHHHHHHHH
Confidence 666666777766666666665
No 7
>d1vetb_ d.110.7.1 (B:) Late endosomal/lysosomal Mp1 interacting protein p14 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=68.98 E-value=11 Score=23.71 Aligned_cols=93 Identities=14% Similarity=0.172 Sum_probs=60.4
Q ss_pred chhceeEEEeCCCCEEEEecCCCCChhhHHHHHHHHHHHh---hccC----CCccceeEeCCEEEEEEEeCcEEEEEEec
Q psy14094 6 LNMQFMLLFSRQGKLRLQKWYVAHPDKLKKKITRELITTI---LARK----PKMCSFLEWKDVKIVYKRYASLYFCCAIE 78 (149)
Q Consensus 6 ~mi~~i~iln~~G~~ll~k~y~~~~~~~~~~~~~~~~~~~---~~~~----~~~~pi~~~~~~~~vy~~~~~Lyfv~v~~ 78 (149)
+-+.+..+++++|-++-+..-.+.......+....++... ..+. +-.--+++.++-.++-.+.++.+++++++
T Consensus 17 ~GV~~avlvs~DGl~ia~~~~~~~d~~~lAAi~a~~l~~~~~~a~~~~~~G~~~qviie~~~G~l~i~~~g~~~L~vla~ 96 (118)
T d1vetb_ 17 GGVQSTLLLNNEGSLLAYSGYGDTDARVTAAIASNIWAAYDRNGNQAFNEDSLKFILMDCMEGRVAITRVANLLLCMYAK 96 (118)
T ss_dssp TTEEEEEEECTTCCEEEEEECCSSCHHHHHHHHHHHHHHHHHHHCCTTTCCCCCEEEEEETTEEEEEEEETTEEEEEEEC
T ss_pred CCeeEEEEECCCCCeeeecCCCccCHHHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEEcCCCEEEEEEcccCeEEEEec
Confidence 5678999999999999664433333333333444444332 1111 11235667776666666778899999999
Q ss_pred CCCCHHHHHHHHHHHHHHHH
Q psy14094 79 QNDNELLTLEIIHRYVELLD 98 (149)
Q Consensus 79 ~~~n~l~ile~L~~lv~~l~ 98 (149)
++.|-=.+--=++++++-|+
T Consensus 97 ~~~~lGll~~e~~~~~~~L~ 116 (118)
T d1vetb_ 97 ETVGFGMLKAKAQALVQYLE 116 (118)
T ss_dssp TTSCHHHHHHHHHHHHHHHH
T ss_pred CCCCchHHHHHHHHHHHHhc
Confidence 99998777777777776654
No 8
>d2j3wa1 d.110.4.3 (A:1-140) Sedlin (SEDL) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=63.98 E-value=16 Score=23.73 Aligned_cols=93 Identities=4% Similarity=0.052 Sum_probs=54.3
Q ss_pred eeEEEeCCCCEEEEecCCCCChh---hHHHHHHHH--------HHHhhccCCC--ccceeEeCCEE-EEEEEeCcEEEEE
Q psy14094 10 FMLLFSRQGKLRLQKWYVAHPDK---LKKKITREL--------ITTILARKPK--MCSFLEWKDVK-IVYKRYASLYFCC 75 (149)
Q Consensus 10 ~i~iln~~G~~ll~k~y~~~~~~---~~~~~~~~~--------~~~~~~~~~~--~~pi~~~~~~~-~vy~~~~~Lyfv~ 75 (149)
.+.|++++|.++..+-|.+.... +..+....+ +......+.. ...+...++++ +.|....++-|+.
T Consensus 6 ~f~IIg~~~~pLY~~ef~~~~~~~~~~~~~~~~~fi~hssLDive~~~~~~~~~~l~~l~~~~~~~v~~y~T~tg~Kfvl 85 (140)
T d2j3wa1 6 YFVIVGHHDNPVFEMEFLPPGKAESKDDHRHLNQFIAHAALDLVDENMWLSNNMYLKTVDKFNEWFVSAFVTAGHMRFIM 85 (140)
T ss_dssp EEEEECTTSCEEEEEEECCSCCGGGHHHHHHHHHHHHHHHHHHHHHHGGGCSCSEEEEEEEETTEEEEEEECTTCCEEEE
T ss_pred EEEEEcCCCCeeEEEecCCcccccccchHHHHHHHHHHHHHHHHHHhcccCCCccceeEEecCCEEEEEEEcCCCcEEEE
Confidence 57899999999999999754221 111111111 1111111221 12333456665 5888899999999
Q ss_pred EecCCCCHHHHHHHHHHHHHHHHHHhcc
Q psy14094 76 AIEQNDNELLTLEIIHRYVELLDKYFGS 103 (149)
Q Consensus 76 v~~~~~n~l~ile~L~~lv~~l~~yf~~ 103 (149)
+++... +-.+-.|++.+.++.-+|.-+
T Consensus 86 ~td~~~-~~~i~~~~~~v~~lYv~~v~N 112 (140)
T d2j3wa1 86 LHDVRQ-EDGIKNFFTDVYDLYIKFAMN 112 (140)
T ss_dssp EESSCC-HHHHHHHHHHHHHHHHHHHHS
T ss_pred EeCCCc-chHHHHHHHHHHHHHHHHhhC
Confidence 998654 334556666666666555533
No 9
>d1zofa1 c.47.1.10 (A:1-170) Thioredoxin reductase TsaA {Helicobacter pylori [TaxId: 210]}
Probab=49.20 E-value=13 Score=24.59 Aligned_cols=21 Identities=14% Similarity=0.072 Sum_probs=16.6
Q ss_pred hceeEEEeCCCCEEEEecCCC
Q psy14094 8 MQFMLLFSRQGKLRLQKWYVA 28 (149)
Q Consensus 8 i~~i~iln~~G~~ll~k~y~~ 28 (149)
..+.|++|++|.++...+...
T Consensus 123 ~r~tfvID~~G~I~~~~~~~~ 143 (170)
T d1zofa1 123 LRGAFLIDKNMKVRHAVINDL 143 (170)
T ss_dssp CEEEEEEETTTEEEEEEEESS
T ss_pred eEEEEEEcCCCeEEEEEEeCC
Confidence 467899999999998765443
No 10
>d1nrja_ d.110.4.4 (A:) Srx domain of the signal recognition particle receptor alpha-subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=43.00 E-value=40 Score=22.15 Aligned_cols=74 Identities=18% Similarity=0.292 Sum_probs=42.4
Q ss_pred hhceeEEEeCCCCEEEEecC--CCCChhhHHHHHHHHHHHhhccCCC---------ccceeEeC-------CEEEEEE--
Q psy14094 7 NMQFMLLFSRQGKLRLQKWY--VAHPDKLKKKITRELITTILARKPK---------MCSFLEWK-------DVKIVYK-- 66 (149)
Q Consensus 7 mi~~i~iln~~G~~ll~k~y--~~~~~~~~~~~~~~~~~~~~~~~~~---------~~pi~~~~-------~~~~vy~-- 66 (149)
|+..+.|+..+|+++..-.= +........++...+...-.++.+. ..+.+.++ +.+.+|.
T Consensus 1 M~dQf~vFTp~GqvLY~yN~l~kKfsE~qiN~fIShLissP~~~~es~~~~~~~~~~~~l~si~s~~k~s~~F~~~~h~s 80 (155)
T d1nrja_ 1 MFDQLAVFTPQGQVLYQYNCLGKKFSEIQINSFISQLITSPVTRKESVANANTDGFDFNLLTINSEHKNSPSFNALFYLN 80 (155)
T ss_dssp CCCEEEEECTTCBEEEEEETTSCCCCHHHHHHHHHHHHHSCCCGGGEECSGGGTTCCEEEEECC--------CEEEEEEE
T ss_pred CcceEEEeccCceEEEEecccchHHHHHHHHHHHHHHhcCCccccccccccccccccceeeeeccccccCcchHHhheec
Confidence 78899999999999975322 2234444445555544332222211 13555555 4443443
Q ss_pred EeCcEEEEEEecCC
Q psy14094 67 RYASLYFCCAIEQN 80 (149)
Q Consensus 67 ~~~~Lyfv~v~~~~ 80 (149)
+...|||+++-.+.
T Consensus 81 KqPeLy~VvTyAeq 94 (155)
T d1nrja_ 81 KQPELYFVVTFAEQ 94 (155)
T ss_dssp ETTEEEEEEEESSC
T ss_pred CCCcEEEEEEeccc
Confidence 45679999888744
No 11
>d1hzta_ d.113.1.2 (A:) Isopentenyl diphosphate isomerase {Escherichia coli [TaxId: 562]}
Probab=35.30 E-value=11 Score=24.34 Aligned_cols=15 Identities=27% Similarity=0.496 Sum_probs=13.5
Q ss_pred eeEEEeCCCCEEEEe
Q psy14094 10 FMLLFSRQGKLRLQK 24 (149)
Q Consensus 10 ~i~iln~~G~~ll~k 24 (149)
+++|+|++|+.++.|
T Consensus 6 ~v~i~n~~g~vLl~k 20 (153)
T d1hzta_ 6 SSWLFNAKGQLLVTR 20 (153)
T ss_dssp EEEEECTTCCEEEEE
T ss_pred EEEEEECCCEEEEEE
Confidence 588999999999976
No 12
>d1nvpd1 a.32.1.1 (D:3-53) Small chain TOA2, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.50 E-value=22 Score=19.27 Aligned_cols=15 Identities=33% Similarity=0.313 Sum_probs=11.3
Q ss_pred HHHHHHHHHhCcEee
Q psy14094 116 AYFILDELLLGGEIQ 130 (149)
Q Consensus 116 v~~llDE~id~G~~~ 130 (149)
.-+.|||++-.|.+.
T Consensus 13 L~dtLDeli~~~~I~ 27 (51)
T d1nvpd1 13 LQESLDELIQSQQIT 27 (51)
T ss_dssp HHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHcCCCC
Confidence 346789999888764
No 13
>d1jkna_ d.113.1.1 (A:) Diadenosine tetraphosphate hydrolase (Ap4A hydrolase) {Narrow-leaved blue lupine (Lupinus angustifolius) [TaxId: 3871]}
Probab=33.43 E-value=12 Score=24.24 Aligned_cols=16 Identities=13% Similarity=0.050 Sum_probs=13.7
Q ss_pred eeEEEeCCCCEEEEec
Q psy14094 10 FMLLFSRQGKLRLQKW 25 (149)
Q Consensus 10 ~i~iln~~G~~ll~k~ 25 (149)
+++|+|.+|++|+.|-
T Consensus 18 g~vI~n~~~~vLL~kR 33 (165)
T d1jkna_ 18 GICLMNNDKKIFAASR 33 (165)
T ss_dssp EEEEECTTSCEEEEEE
T ss_pred EEEEEeCCCEEEEEEE
Confidence 5788999999999873
No 14
>d1z05a1 a.4.5.63 (A:10-80) Transcriptional regulator VC2007 N-terminal domain {Vibrio cholerae [TaxId: 666]}
Probab=32.94 E-value=14 Score=20.62 Aligned_cols=34 Identities=24% Similarity=0.244 Sum_probs=25.8
Q ss_pred cccCHHHHHhc----HHHHHHHHHHHHhCcEeeecCHH
Q psy14094 102 GSVCELDIIFN----FEKAYFILDELLLGGEIQETSKK 135 (149)
Q Consensus 102 ~~v~E~~i~~N----f~~v~~llDE~id~G~~~~Td~~ 135 (149)
+.++..+|-+. ...|..+++++++.|++.++.+.
T Consensus 19 g~~sr~eLa~~~glS~~Tv~~~l~~L~~~Glv~e~~~~ 56 (71)
T d1z05a1 19 GPISRIDLSKESELAPASITKITRELIDAHLIHETTVQ 56 (71)
T ss_dssp CSBCHHHHHHHHTCCHHHHHHHHHHHHHTTSEEEECHH
T ss_pred CCcCHHHHHHHHCCCHHHHHHHHHHHHHCCCEEEecCc
Confidence 44666655544 56789999999999999987654
No 15
>d1dpua_ a.4.5.16 (A:) C-terminal domain of RPA32 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.50 E-value=14 Score=21.17 Aligned_cols=21 Identities=24% Similarity=0.124 Sum_probs=18.4
Q ss_pred cHHHHHHHHHHHHhCcEeeec
Q psy14094 112 NFEKAYFILDELLLGGEIQET 132 (149)
Q Consensus 112 Nf~~v~~llDE~id~G~~~~T 132 (149)
.-..|.+.+|++.+.|.+..|
T Consensus 37 ~~~~i~~aid~L~~eG~IYsT 57 (69)
T d1dpua_ 37 SVSSIKQAVDFLSNEGHIYST 57 (69)
T ss_dssp CHHHHHHHHHHHHHTTSEEEC
T ss_pred CHHHHHHHHHHHHhCCceecc
Confidence 356889999999999999877
No 16
>d1z6ra1 a.4.5.63 (A:12-81) Mlc protein N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=31.80 E-value=8.9 Score=21.72 Aligned_cols=33 Identities=24% Similarity=0.195 Sum_probs=23.6
Q ss_pred ccCHHHHHh----cHHHHHHHHHHHHhCcEeeecCHH
Q psy14094 103 SVCELDIIF----NFEKAYFILDELLLGGEIQETSKK 135 (149)
Q Consensus 103 ~v~E~~i~~----Nf~~v~~llDE~id~G~~~~Td~~ 135 (149)
.++..+|-+ ....|..+++|+++.|++.++.+.
T Consensus 19 ~~sr~eLa~~~gLS~~Tvs~iv~~L~~~glv~e~g~~ 55 (70)
T d1z6ra1 19 PVSRIDLSRLAQLAPASITKIVHEMLEAHLVQELEIK 55 (70)
T ss_dssp SCCHHHHHHHTTCCHHHHHHHHHHHHHHTSEEEC---
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEeeCCc
Confidence 366665544 356889999999999999988654
No 17
>d2hoea1 a.4.5.63 (A:10-71) N-acetylglucosamine kinase {Thermotoga maritima [TaxId: 2336]}
Probab=31.46 E-value=9.2 Score=21.27 Aligned_cols=32 Identities=16% Similarity=0.096 Sum_probs=24.0
Q ss_pred ccCHHHHHhc----HHHHHHHHHHHHhCcEeeecCH
Q psy14094 103 SVCELDIIFN----FEKAYFILDELLLGGEIQETSK 134 (149)
Q Consensus 103 ~v~E~~i~~N----f~~v~~llDE~id~G~~~~Td~ 134 (149)
.++..+|-+. -..|..++||+++.|++.++..
T Consensus 12 pisr~eLa~~~gls~~TVs~~v~~L~~~GlV~e~~~ 47 (62)
T d2hoea1 12 PVSRVELAEELGLTKTTVGEIAKIFLEKGIVVEEKD 47 (62)
T ss_dssp CBCHHHHHHHHTCCHHHHHHHHHHHHHHTSEEEEEC
T ss_pred CcCHHHHHHHHCcCHHHHHHHHHHHHHCCCEEECCC
Confidence 3565555544 4578999999999999998753
No 18
>d1nh2d1 a.32.1.1 (D:5-54) Small chain TOA2, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=30.27 E-value=27 Score=18.80 Aligned_cols=28 Identities=21% Similarity=0.291 Sum_probs=16.3
Q ss_pred HHHHHHHHHhCcEeeecCHHHHHHHHHHHhh
Q psy14094 116 AYFILDELLLGGEIQETSKKNVLKAIAAQDL 146 (149)
Q Consensus 116 v~~llDE~id~G~~~~Td~~~i~~~i~~~~~ 146 (149)
.-+.|||++-.|-+. |+.-.+-..++||
T Consensus 15 L~dtLDeli~~~~I~---p~LA~kVL~qFDk 42 (50)
T d1nh2d1 15 LVDALDTLISDGRIE---ASLAMRVLETFDK 42 (50)
T ss_dssp HHHHHHHHHHTTSSC---HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCC---HHHHHHHHHHHHH
Confidence 346789999888765 4433333334454
No 19
>d1sxjd1 a.80.1.1 (D:263-353) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.14 E-value=22 Score=20.72 Aligned_cols=31 Identities=6% Similarity=0.064 Sum_probs=23.9
Q ss_pred HhcHHHHHHHHHHHHhCcEeeecCHHHHHHH
Q psy14094 110 IFNFEKAYFILDELLLGGEIQETSKKNVLKA 140 (149)
Q Consensus 110 ~~Nf~~v~~llDE~id~G~~~~Td~~~i~~~ 140 (149)
-.||..++..+++++..||.-..=...+.++
T Consensus 15 ~~~f~~a~~~i~~l~~~Gys~~dIl~~l~~~ 45 (91)
T d1sxjd1 15 SGDFDEIKKYVNTFMKSGWSAASVVNQLHEY 45 (91)
T ss_dssp SCCHHHHHHHHHHHHHTSCCCTTHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 3689999999999999999876545555444
No 20
>d2zcta1 c.47.1.10 (A:6-242) Peroxiredoxin {Aeropyrum pernix [TaxId: 56636]}
Probab=28.32 E-value=25 Score=24.69 Aligned_cols=35 Identities=14% Similarity=0.247 Sum_probs=23.9
Q ss_pred hhceeEEEeCCCCEEEEecCCCCC---hhhHHHHHHHH
Q psy14094 7 NMQFMLLFSRQGKLRLQKWYVAHP---DKLKKKITREL 41 (149)
Q Consensus 7 mi~~i~iln~~G~~ll~k~y~~~~---~~~~~~~~~~~ 41 (149)
...+.||+|.+|.++..-+|.... ..+..+..+.+
T Consensus 119 ~~RatFIIDpdG~Ir~~~~~~~~~gR~~dEiLr~l~aL 156 (237)
T d2zcta1 119 TVRGVFIVDARGVIRTMLYYPMELGRLVDEILRIVKAL 156 (237)
T ss_dssp TCCEEEEECTTSBEEEEEECCTTBCCCHHHHHHHHHHH
T ss_pred ceeeeEEECCCCEEEEEEEeCCCCCCCHHHHHHHHHHH
Confidence 467899999999999988776433 23444444443
No 21
>d1xcca_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Plasmodium yoelii yoelii [TaxId: 73239]}
Probab=27.49 E-value=23 Score=24.61 Aligned_cols=35 Identities=14% Similarity=0.268 Sum_probs=24.3
Q ss_pred hhceeEEEeCCCCEEEEecCCCCC---hhhHHHHHHHH
Q psy14094 7 NMQFMLLFSRQGKLRLQKWYVAHP---DKLKKKITREL 41 (149)
Q Consensus 7 mi~~i~iln~~G~~ll~k~y~~~~---~~~~~~~~~~~ 41 (149)
...+.||+|.+|.++..-+|.... ..+..+..+++
T Consensus 126 ~~R~tFiIDp~g~Ir~~~~~~~~~gr~~~EiLr~l~aL 163 (219)
T d1xcca_ 126 TCRCLFFISPEKKIKATVLYPATTGRNAHEILRVLKSL 163 (219)
T ss_dssp ECEEEEEECTTSBEEEEEEECTTBCCCHHHHHHHHHHH
T ss_pred eeeeeEEEcCcceEEEEEEeCCCcccCHHHHHHHHHHH
Confidence 457999999999999998886443 34444444443
No 22
>d1prxa_ c.47.1.10 (A:) 1-Cys peroxiredoxin {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.63 E-value=33 Score=23.65 Aligned_cols=24 Identities=25% Similarity=0.454 Sum_probs=20.3
Q ss_pred hhceeEEEeCCCCEEEEecCCCCC
Q psy14094 7 NMQFMLLFSRQGKLRLQKWYVAHP 30 (149)
Q Consensus 7 mi~~i~iln~~G~~ll~k~y~~~~ 30 (149)
.+.+.||+|.+|.++..-.|....
T Consensus 126 ~~RatFIID~~g~Ir~~~~~~~~~ 149 (220)
T d1prxa_ 126 TARVVFVFGPDKKLKLSILYPATT 149 (220)
T ss_dssp TCCEEEEECTTSBEEEEEECCTTB
T ss_pred eeEEEEEEcCccceeEEEEecCCc
Confidence 467899999999999998886543
No 23
>d1z5ye1 c.47.1.10 (E:49-184) Thioredoxin-like protein CcmG (CycY, DsbE) {Escherichia coli [TaxId: 562]}
Probab=23.10 E-value=59 Score=19.63 Aligned_cols=16 Identities=19% Similarity=0.320 Sum_probs=12.6
Q ss_pred hceeEEEeCCCCEEEE
Q psy14094 8 MQFMLLFSRQGKLRLQ 23 (149)
Q Consensus 8 i~~i~iln~~G~~ll~ 23 (149)
+=..+++|++|+++..
T Consensus 95 ~P~~~liD~~G~i~~~ 110 (136)
T d1z5ye1 95 APETFLIDGNGIIRYR 110 (136)
T ss_dssp BSEEEEECTTSCEEEE
T ss_pred cceEEEEcCCCEEEEE
Confidence 4468999999998844
No 24
>d1sjya_ d.113.1.1 (A:) Hypothetical protein DR1025 {Deinococcus radiodurans [TaxId: 1299]}
Probab=22.20 E-value=27 Score=21.90 Aligned_cols=19 Identities=16% Similarity=0.202 Sum_probs=15.1
Q ss_pred hceeEEEeCCCCEEEEecC
Q psy14094 8 MQFMLLFSRQGKLRLQKWY 26 (149)
Q Consensus 8 i~~i~iln~~G~~ll~k~y 26 (149)
.-+++++|.+|++++.|-+
T Consensus 14 a~~~vi~~~~g~iLl~~r~ 32 (158)
T d1sjya_ 14 AAGVVLLNERGDILLVQEK 32 (158)
T ss_dssp EEEEEEBCTTCCEEEEEES
T ss_pred EEEEEEEeCCCEEEEEEEe
Confidence 3467899999999998743
No 25
>d1y88a1 a.60.4.3 (A:128-186) Hypothetical protein AF1548, C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=20.50 E-value=15 Score=19.75 Aligned_cols=17 Identities=29% Similarity=0.305 Sum_probs=14.3
Q ss_pred HHHHHHHhCcEeeecCH
Q psy14094 118 FILDELLLGGEIQETSK 134 (149)
Q Consensus 118 ~llDE~id~G~~~~Td~ 134 (149)
++|||++-.|.+..-|.
T Consensus 11 evldelvraglvfcrdv 27 (59)
T d1y88a1 11 EVLDELVRAGLVFCRDV 27 (59)
T ss_dssp HHHHHHHHTTCCBHHHH
T ss_pred HHHHHHHHhchhhhHHH
Confidence 68999999999987653
Done!