Query psy14099
Match_columns 224
No_of_seqs 303 out of 2487
Neff 8.5
Searched_HMMs 46136
Date Fri Aug 16 19:29:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14099.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14099hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR00898 2A0119 cation transp 99.5 1.3E-14 2.8E-19 131.5 4.6 110 110-224 33-153 (505)
2 KOG0253|consensus 99.4 1.3E-13 2.9E-18 118.6 4.7 94 2-104 397-490 (528)
3 KOG0255|consensus 98.9 8.3E-10 1.8E-14 100.8 4.7 54 170-224 88-144 (521)
4 TIGR01299 synapt_SV2 synaptic 98.9 3.6E-09 7.7E-14 100.5 8.0 96 2-106 611-706 (742)
5 TIGR00898 2A0119 cation transp 98.7 6.1E-08 1.3E-12 87.9 8.9 96 3-105 372-467 (505)
6 TIGR00887 2A0109 phosphate:H+ 98.6 7.3E-08 1.6E-12 87.7 7.2 97 4-106 353-450 (502)
7 KOG0255|consensus 98.4 1.2E-06 2.6E-11 80.0 8.7 100 3-108 367-466 (521)
8 PRK09952 shikimate transporter 98.3 2.9E-06 6.2E-11 76.0 8.2 51 56-106 351-402 (438)
9 PF00083 Sugar_tr: Sugar (and 98.3 1.7E-08 3.6E-13 90.1 -6.6 104 2-106 302-407 (451)
10 PRK10642 proline/glycine betai 98.2 3.3E-06 7.1E-11 76.7 7.4 47 60-106 354-400 (490)
11 KOG0254|consensus 98.2 5.3E-06 1.1E-10 75.9 8.1 101 3-103 346-450 (513)
12 KOG0252|consensus 98.2 4.5E-07 9.7E-12 80.7 1.0 100 2-106 364-464 (538)
13 KOG0569|consensus 98.0 5.4E-06 1.2E-10 75.1 4.9 106 2-108 321-428 (485)
14 TIGR00880 2_A_01_02 Multidrug 98.0 3.6E-05 7.7E-10 56.3 8.3 93 5-106 17-109 (141)
15 PRK10406 alpha-ketoglutarate t 98.0 1.7E-05 3.6E-10 70.8 7.5 41 65-105 353-394 (432)
16 PRK10077 xylE D-xylose transpo 98.0 1.7E-05 3.8E-10 71.2 7.2 97 4-105 324-421 (479)
17 TIGR00903 2A0129 major facilit 98.0 1.2E-05 2.7E-10 70.6 5.5 53 54-106 286-338 (368)
18 TIGR00887 2A0109 phosphate:H+ 97.8 4.9E-05 1.1E-09 69.2 7.6 98 2-104 72-171 (502)
19 TIGR01299 synapt_SV2 synaptic 97.8 7.8E-05 1.7E-09 71.2 7.8 92 2-102 218-309 (742)
20 TIGR00895 2A0115 benzoate tran 97.8 0.00014 3E-09 62.9 8.8 94 3-105 302-395 (398)
21 PRK11551 putative 3-hydroxyphe 97.7 9.2E-05 2E-09 65.0 7.5 95 3-106 272-366 (406)
22 TIGR00891 2A0112 putative sial 97.6 0.00014 3.1E-09 63.2 6.9 47 60-106 340-386 (405)
23 PRK15462 dipeptide/tripeptide 97.6 6.4E-05 1.4E-09 68.6 4.6 41 67-107 119-161 (493)
24 PRK15075 citrate-proton sympor 97.6 0.00019 4.1E-09 64.1 6.8 47 60-106 343-390 (434)
25 PRK12307 putative sialic acid 97.5 0.00027 5.8E-09 62.5 7.4 40 67-106 340-379 (426)
26 TIGR00879 SP MFS transporter, 97.5 0.00031 6.7E-09 62.1 7.8 40 67-106 402-441 (481)
27 TIGR00890 2A0111 Oxalate/Forma 97.5 0.00024 5.3E-09 60.8 6.3 97 3-106 257-353 (377)
28 TIGR00893 2A0114 d-galactonate 97.5 0.0002 4.3E-09 61.5 5.8 93 4-105 47-139 (399)
29 TIGR00711 efflux_EmrB drug res 97.5 0.00061 1.3E-08 61.1 8.8 94 4-106 55-148 (485)
30 PRK15075 citrate-proton sympor 97.5 0.00028 6.1E-09 63.0 6.4 38 65-102 134-171 (434)
31 TIGR00900 2A0121 H+ Antiporter 97.4 0.00078 1.7E-08 57.5 8.9 52 54-105 98-149 (365)
32 TIGR00879 SP MFS transporter, 97.4 0.0004 8.7E-09 61.3 7.3 49 56-104 135-183 (481)
33 TIGR02332 HpaX 4-hydroxyphenyl 97.4 0.00086 1.9E-08 59.6 9.2 40 67-106 352-391 (412)
34 TIGR00895 2A0115 benzoate tran 97.4 0.00021 4.6E-09 61.7 5.1 93 4-105 70-162 (398)
35 PRK10473 multidrug efflux syst 97.4 0.00061 1.3E-08 59.7 8.0 93 4-105 56-148 (392)
36 TIGR02332 HpaX 4-hydroxyphenyl 97.4 0.00055 1.2E-08 60.8 7.5 93 4-105 61-153 (412)
37 PRK11102 bicyclomycin/multidru 97.4 0.00054 1.2E-08 59.4 7.2 93 4-105 44-136 (377)
38 PRK11551 putative 3-hydroxyphe 97.4 0.00055 1.2E-08 60.1 7.3 93 3-104 67-159 (406)
39 TIGR00891 2A0112 putative sial 97.4 0.00055 1.2E-08 59.5 7.1 50 56-105 108-157 (405)
40 PRK10642 proline/glycine betai 97.4 0.00053 1.1E-08 62.3 7.1 93 3-102 74-172 (490)
41 PRK12307 putative sialic acid 97.3 0.00062 1.3E-08 60.2 7.2 92 4-104 71-162 (426)
42 TIGR00900 2A0121 H+ Antiporter 97.3 0.0011 2.5E-08 56.5 8.4 94 4-105 265-358 (365)
43 PRK03699 putative transporter; 97.3 0.00076 1.6E-08 59.3 7.1 93 3-104 59-151 (394)
44 PRK11663 regulatory protein Uh 97.3 0.00063 1.4E-08 60.8 6.6 94 3-105 75-168 (434)
45 TIGR00710 efflux_Bcr_CflA drug 97.3 0.00068 1.5E-08 58.6 6.6 92 5-105 59-150 (385)
46 TIGR00883 2A0106 metabolite-pr 97.3 0.00038 8.2E-09 60.0 5.0 52 55-106 319-371 (394)
47 PRK10077 xylE D-xylose transpo 97.3 0.0011 2.4E-08 59.5 8.1 44 59-102 131-174 (479)
48 PRK03893 putative sialic acid 97.3 0.0011 2.5E-08 59.7 8.1 93 4-105 73-165 (496)
49 cd06174 MFS The Major Facilita 97.2 0.00035 7.7E-09 59.1 4.3 93 4-105 52-144 (352)
50 PRK09556 uhpT sugar phosphate 97.2 0.0011 2.4E-08 59.7 7.6 39 68-106 369-408 (467)
51 PF07690 MFS_1: Major Facilita 97.2 0.0014 3E-08 55.8 7.7 94 4-106 50-143 (352)
52 PRK15403 multidrug efflux syst 97.2 0.0013 2.8E-08 58.5 7.8 94 3-105 68-161 (413)
53 TIGR00889 2A0110 nucleoside tr 97.2 0.0017 3.7E-08 57.9 8.4 96 5-106 270-367 (418)
54 cd06174 MFS The Major Facilita 97.2 0.0012 2.6E-08 55.8 7.1 94 4-106 229-323 (352)
55 PRK10054 putative transporter; 97.2 0.0014 3.1E-08 57.8 7.5 42 65-106 113-154 (395)
56 PRK10213 nepI ribonucleoside t 97.1 0.0017 3.8E-08 57.3 7.8 93 5-106 74-166 (394)
57 PRK03545 putative arabinose tr 97.1 0.0023 5E-08 56.1 8.3 94 4-106 62-155 (390)
58 PRK11273 glpT sn-glycerol-3-ph 97.1 0.0018 3.9E-08 58.1 7.5 92 3-99 80-171 (452)
59 PRK10504 putative transporter; 97.1 0.0027 5.8E-08 57.0 8.6 93 4-105 63-155 (471)
60 PRK09952 shikimate transporter 97.0 0.0015 3.3E-08 58.4 6.7 41 62-102 139-179 (438)
61 PLN00028 nitrate transmembrane 97.0 0.0014 3E-08 59.4 6.5 37 68-104 143-179 (476)
62 PRK03893 putative sialic acid 97.0 0.00091 2E-08 60.4 5.2 41 66-106 384-424 (496)
63 PRK10406 alpha-ketoglutarate t 97.0 0.0019 4E-08 57.7 6.8 42 60-101 136-177 (432)
64 TIGR00881 2A0104 phosphoglycer 97.0 0.0033 7.1E-08 53.8 8.0 44 63-106 325-368 (379)
65 PRK11646 multidrug resistance 97.0 0.0033 7.2E-08 55.6 8.2 92 5-105 65-156 (400)
66 TIGR00881 2A0104 phosphoglycer 97.0 0.00034 7.4E-09 60.0 1.8 90 3-101 47-136 (379)
67 PRK15402 multidrug efflux syst 97.0 0.0025 5.4E-08 56.1 7.3 41 65-105 118-158 (406)
68 TIGR00901 2A0125 AmpG-related 97.0 0.0046 9.9E-08 53.3 8.6 40 67-106 102-141 (356)
69 TIGR00901 2A0125 AmpG-related 97.0 0.0045 9.8E-08 53.3 8.6 40 54-93 315-354 (356)
70 PRK08633 2-acyl-glycerophospho 96.9 0.0016 3.5E-08 64.8 6.3 96 4-106 65-161 (1146)
71 PRK11663 regulatory protein Uh 96.9 0.0044 9.6E-08 55.3 8.3 39 68-106 357-395 (434)
72 TIGR00893 2A0114 d-galactonate 96.9 0.0036 7.9E-08 53.6 7.5 42 65-106 328-369 (399)
73 TIGR00894 2A0114euk Na(+)-depe 96.9 0.0018 3.9E-08 58.2 5.8 47 60-106 143-189 (465)
74 TIGR00903 2A0129 major facilit 96.9 0.0038 8.2E-08 54.8 7.6 39 68-106 98-136 (368)
75 TIGR00712 glpT glycerol-3-phos 96.9 0.0017 3.7E-08 58.0 5.4 45 60-104 130-174 (438)
76 TIGR00886 2A0108 nitrite extru 96.9 0.003 6.4E-08 54.4 6.6 40 65-104 107-146 (366)
77 PRK10489 enterobactin exporter 96.8 0.0062 1.3E-07 53.8 8.7 47 60-106 324-370 (417)
78 TIGR00899 2A0120 sugar efflux 96.8 0.0042 9E-08 53.6 7.4 47 59-106 299-345 (375)
79 TIGR00711 efflux_EmrB drug res 96.8 0.0059 1.3E-07 54.7 8.5 98 4-106 309-406 (485)
80 PRK15011 sugar efflux transpor 96.8 0.0039 8.4E-08 54.9 7.1 43 63-106 320-362 (393)
81 PRK05122 major facilitator sup 96.8 0.0069 1.5E-07 53.1 8.5 49 57-105 311-359 (399)
82 KOG0569|consensus 96.8 0.0072 1.5E-07 55.1 8.6 107 2-115 76-183 (485)
83 PRK12382 putative transporter; 96.8 0.0043 9.2E-08 54.3 7.0 47 60-106 314-360 (392)
84 TIGR00885 fucP L-fucose:H+ sym 96.8 0.0055 1.2E-07 54.6 7.8 98 3-106 55-152 (410)
85 PF07690 MFS_1: Major Facilita 96.8 0.0045 9.8E-08 52.6 7.0 46 56-101 307-352 (352)
86 PRK11010 ampG muropeptide tran 96.7 0.0088 1.9E-07 54.6 8.9 50 56-105 115-164 (491)
87 TIGR00883 2A0106 metabolite-pr 96.7 0.0036 7.8E-08 53.9 6.1 39 66-104 114-152 (394)
88 PRK10091 MFS transport protein 96.7 0.0071 1.5E-07 52.9 8.0 92 4-104 56-147 (382)
89 PRK11195 lysophospholipid tran 96.7 0.0049 1.1E-07 54.4 6.5 47 60-106 100-146 (393)
90 PRK14995 methyl viologen resis 96.6 0.011 2.3E-07 53.9 8.5 93 5-106 60-153 (495)
91 PRK12382 putative transporter; 96.6 0.0061 1.3E-07 53.3 6.7 39 67-105 131-169 (392)
92 PRK03633 putative MFS family t 96.5 0.011 2.4E-07 51.7 7.7 95 3-106 58-152 (381)
93 TIGR00897 2A0118 polyol permea 96.5 0.012 2.5E-07 52.0 7.9 36 68-103 125-161 (402)
94 PRK09705 cynX putative cyanate 96.4 0.0081 1.8E-07 52.9 6.5 91 4-104 62-152 (393)
95 PRK05122 major facilitator sup 96.4 0.0065 1.4E-07 53.2 5.9 39 66-104 130-168 (399)
96 TIGR00886 2A0108 nitrite extru 96.4 0.0072 1.6E-07 52.0 6.0 40 57-97 327-366 (366)
97 PRK11902 ampG muropeptide tran 96.4 0.019 4E-07 50.6 8.7 42 63-104 109-150 (402)
98 TIGR01301 GPH_sucrose GPH fami 96.4 0.016 3.6E-07 52.8 8.5 46 59-104 125-172 (477)
99 KOG0254|consensus 96.4 0.007 1.5E-07 55.4 6.1 90 2-100 105-194 (513)
100 PRK09874 drug efflux system pr 96.4 0.011 2.5E-07 51.6 7.1 40 66-105 124-163 (408)
101 PRK11273 glpT sn-glycerol-3-ph 96.4 0.015 3.3E-07 52.1 8.1 38 68-105 367-405 (452)
102 PRK09556 uhpT sugar phosphate 96.2 0.0021 4.5E-08 58.0 1.7 48 57-104 131-178 (467)
103 PRK15034 nitrate/nitrite trans 96.2 0.018 4E-07 52.2 7.7 47 60-106 357-424 (462)
104 PRK11043 putative transporter; 96.2 0.017 3.6E-07 50.7 7.3 38 68-105 114-151 (401)
105 KOG2615|consensus 96.2 0.0043 9.3E-08 54.6 3.2 85 8-105 90-177 (451)
106 PRK10489 enterobactin exporter 96.2 0.011 2.4E-07 52.3 5.9 46 60-105 122-167 (417)
107 TIGR00806 rfc RFC reduced fola 96.1 0.021 4.6E-07 52.0 7.4 50 56-106 123-172 (511)
108 PRK10207 dipeptide/tripeptide 96.1 0.0097 2.1E-07 54.4 5.3 39 66-104 123-163 (489)
109 PRK11652 emrD multidrug resist 96.1 0.02 4.4E-07 50.0 7.2 39 67-105 115-153 (394)
110 PRK10133 L-fucose transporter; 96.1 0.027 5.9E-07 50.6 8.0 95 4-104 79-173 (438)
111 PRK15034 nitrate/nitrite trans 96.1 0.035 7.5E-07 50.5 8.6 42 63-104 142-183 (462)
112 PRK06814 acylglycerophosphoeth 96.1 0.013 2.9E-07 58.6 6.4 52 56-107 116-167 (1140)
113 TIGR00890 2A0111 Oxalate/Forma 96.0 0.013 2.8E-07 50.0 5.5 26 199-224 241-266 (377)
114 TIGR00924 yjdL_sub1_fam amino 96.0 0.0069 1.5E-07 55.0 3.8 41 66-106 120-163 (475)
115 PRK10504 putative transporter; 96.0 0.033 7.2E-07 50.0 8.2 46 60-105 365-410 (471)
116 PRK03699 putative transporter; 96.0 0.022 4.8E-07 50.0 6.8 94 3-106 258-351 (394)
117 TIGR00792 gph sugar (Glycoside 95.9 0.036 7.7E-07 49.0 8.1 94 5-106 276-376 (437)
118 TIGR00892 2A0113 monocarboxyla 95.9 0.017 3.6E-07 52.1 6.0 37 67-104 127-163 (455)
119 PRK09528 lacY galactoside perm 95.8 0.015 3.2E-07 51.6 5.1 45 62-106 329-374 (420)
120 TIGR00896 CynX cyanate transpo 95.8 0.027 5.9E-07 48.5 6.7 90 4-104 53-142 (355)
121 PF11700 ATG22: Vacuole efflux 95.8 0.038 8.2E-07 50.5 7.7 105 2-107 333-439 (477)
122 TIGR00897 2A0118 polyol permea 95.6 0.065 1.4E-06 47.2 8.4 37 69-106 336-372 (402)
123 PRK08633 2-acyl-glycerophospho 95.6 0.022 4.8E-07 56.8 5.7 43 56-98 330-372 (1146)
124 COG2223 NarK Nitrate/nitrite t 95.5 0.02 4.4E-07 50.8 4.5 43 62-105 118-160 (417)
125 PLN00028 nitrate transmembrane 95.5 0.029 6.2E-07 50.9 5.7 47 57-104 357-403 (476)
126 PRK09584 tppB putative tripept 95.5 0.04 8.7E-07 50.4 6.6 40 67-106 131-172 (500)
127 COG2270 Permeases of the major 95.4 0.011 2.4E-07 52.6 2.6 96 2-106 304-399 (438)
128 PTZ00207 hypothetical protein; 95.4 0.1 2.2E-06 48.9 9.0 35 63-98 135-169 (591)
129 PF05977 MFS_3: Transmembrane 95.3 0.15 3.3E-06 47.1 10.0 97 4-105 63-160 (524)
130 PF11700 ATG22: Vacuole efflux 95.3 0.08 1.7E-06 48.3 8.0 95 4-106 89-210 (477)
131 PRK11010 ampG muropeptide tran 95.3 0.063 1.4E-06 49.0 7.3 42 63-104 331-372 (491)
132 PRK03545 putative arabinose tr 95.2 0.076 1.7E-06 46.4 7.5 37 68-105 314-350 (390)
133 TIGR00710 efflux_Bcr_CflA drug 95.2 0.1 2.2E-06 44.9 8.2 42 60-102 312-354 (385)
134 PF00083 Sugar_tr: Sugar (and 95.1 0.00065 1.4E-08 60.6 -6.2 97 2-105 62-159 (451)
135 PRK09705 cynX putative cyanate 95.0 0.1 2.2E-06 45.9 7.7 94 3-106 257-351 (393)
136 PRK14995 methyl viologen resis 95.0 0.11 2.3E-06 47.4 8.0 96 5-106 314-409 (495)
137 TIGR00899 2A0120 sugar efflux 95.0 0.1 2.2E-06 44.9 7.5 39 67-105 106-146 (375)
138 TIGR00712 glpT glycerol-3-phos 95.0 0.052 1.1E-06 48.5 5.8 37 70-106 367-404 (438)
139 PRK09874 drug efflux system pr 95.0 0.044 9.6E-07 47.9 5.2 48 59-106 322-369 (408)
140 PF06609 TRI12: Fungal trichot 94.8 0.093 2E-06 49.1 7.1 89 5-103 97-185 (599)
141 PRK11646 multidrug resistance 94.8 0.13 2.7E-06 45.5 7.7 40 67-106 316-355 (400)
142 PRK10429 melibiose:sodium symp 94.6 0.12 2.5E-06 46.9 7.2 96 6-105 286-388 (473)
143 TIGR00892 2A0113 monocarboxyla 94.5 0.25 5.5E-06 44.4 9.0 51 56-106 341-391 (455)
144 TIGR02718 sider_RhtX_FptX side 94.4 0.23 5E-06 43.4 8.3 47 60-106 315-362 (390)
145 TIGR00882 2A0105 oligosacchari 94.4 0.064 1.4E-06 47.0 4.7 91 6-105 274-365 (396)
146 TIGR00885 fucP L-fucose:H+ sym 94.3 0.15 3.3E-06 45.3 7.0 92 2-106 285-377 (410)
147 COG2271 UhpC Sugar phosphate p 94.2 0.23 5E-06 44.4 7.7 58 48-105 346-404 (448)
148 TIGR00792 gph sugar (Glycoside 94.2 0.16 3.4E-06 44.9 6.8 36 67-102 118-154 (437)
149 TIGR01272 gluP glucose/galacto 94.1 0.19 4.1E-06 43.0 7.0 93 2-106 194-286 (310)
150 PRK11043 putative transporter; 94.1 0.27 5.8E-06 43.1 8.1 46 60-106 308-353 (401)
151 COG2223 NarK Nitrate/nitrite t 93.6 0.15 3.3E-06 45.4 5.5 50 56-106 322-371 (417)
152 COG2814 AraJ Arabinose efflux 93.5 0.41 9E-06 42.6 8.2 89 4-101 66-154 (394)
153 TIGR00902 2A0127 phenyl propri 93.4 0.52 1.1E-05 41.2 8.6 90 6-105 260-350 (382)
154 PRK11102 bicyclomycin/multidru 93.3 0.4 8.7E-06 41.3 7.7 34 68-102 307-341 (377)
155 TIGR00805 oat sodium-independe 93.0 0.038 8.3E-07 52.2 0.9 42 65-106 189-230 (633)
156 TIGR00896 CynX cyanate transpo 92.6 0.52 1.1E-05 40.5 7.4 48 59-106 296-344 (355)
157 PRK09669 putative symporter Ya 92.5 0.38 8.3E-06 42.9 6.6 42 61-102 122-164 (444)
158 KOG3764|consensus 92.3 0.49 1.1E-05 42.2 6.8 90 7-105 127-217 (464)
159 PRK03633 putative MFS family t 92.3 0.98 2.1E-05 39.3 8.8 42 65-106 302-343 (381)
160 PRK09669 putative symporter Ya 92.2 0.59 1.3E-05 41.7 7.5 93 6-105 284-383 (444)
161 TIGR00894 2A0114euk Na(+)-depe 92.2 0.57 1.2E-05 42.0 7.4 49 57-106 370-418 (465)
162 KOG1330|consensus 92.1 0.12 2.6E-06 46.7 2.7 93 3-104 85-177 (493)
163 PRK15011 sugar efflux transpor 92.0 0.7 1.5E-05 40.5 7.6 38 68-105 125-164 (393)
164 PRK11462 putative transporter; 91.4 0.88 1.9E-05 41.1 7.7 47 57-103 118-165 (460)
165 PRK10429 melibiose:sodium symp 91.1 0.77 1.7E-05 41.5 7.0 42 59-100 117-159 (473)
166 PRK10054 putative transporter; 90.8 0.92 2E-05 39.9 7.1 39 67-106 317-355 (395)
167 KOG2532|consensus 90.6 1.2 2.7E-05 40.5 7.9 40 59-98 139-178 (466)
168 PF13347 MFS_2: MFS/sugar tran 90.5 0.22 4.8E-06 44.3 2.9 44 59-102 114-158 (428)
169 PF05977 MFS_3: Transmembrane 90.3 1.3 2.9E-05 41.0 7.8 43 51-93 310-352 (524)
170 PF03825 Nuc_H_symport: Nucleo 89.8 1.8 3.8E-05 38.6 8.0 48 58-105 311-359 (400)
171 PRK11902 ampG muropeptide tran 89.6 3.4 7.3E-05 36.2 9.7 23 62-84 321-343 (402)
172 PRK11128 putative 3-phenylprop 89.4 2.6 5.6E-05 36.7 8.7 89 6-104 260-349 (382)
173 PRK10091 MFS transport protein 89.0 1.2 2.7E-05 38.7 6.4 33 71-105 313-345 (382)
174 PF05978 UNC-93: Ion channel r 88.7 2.4 5.3E-05 32.7 7.1 81 3-93 54-134 (156)
175 PRK11652 emrD multidrug resist 88.0 2.2 4.9E-05 37.1 7.4 48 57-105 308-355 (394)
176 PRK10133 L-fucose transporter; 87.8 2.1 4.5E-05 38.4 7.2 92 2-105 311-402 (438)
177 PRK09848 glucuronide transport 87.8 2.7 5.9E-05 37.5 7.9 49 57-105 328-383 (448)
178 PRK06814 acylglycerophosphoeth 87.7 0.59 1.3E-05 46.9 4.0 46 57-102 343-388 (1140)
179 COG2271 UhpC Sugar phosphate p 87.6 0.22 4.8E-06 44.5 0.8 57 49-105 118-174 (448)
180 PRK11462 putative transporter; 87.3 2 4.3E-05 38.8 6.8 38 67-104 337-381 (460)
181 PRK15402 multidrug efflux syst 87.2 3.6 7.9E-05 36.0 8.3 27 80-106 340-366 (406)
182 KOG1330|consensus 86.9 2.2 4.7E-05 38.8 6.6 59 48-106 349-408 (493)
183 KOG2504|consensus 86.8 1.4 3E-05 40.7 5.5 53 51-104 138-190 (509)
184 TIGR00882 2A0105 oligosacchari 86.6 1.4 3E-05 38.5 5.3 17 5-21 57-73 (396)
185 PF06813 Nodulin-like: Nodulin 86.6 2.6 5.6E-05 35.2 6.5 92 4-98 54-145 (250)
186 PRK09528 lacY galactoside perm 86.3 1.1 2.4E-05 39.6 4.5 24 201-224 265-288 (420)
187 PF13347 MFS_2: MFS/sugar tran 84.8 1.1 2.4E-05 39.8 3.8 94 5-105 279-379 (428)
188 COG0738 FucP Fucose permease [ 84.7 3.6 7.9E-05 36.8 6.8 98 2-106 64-162 (422)
189 PRK10213 nepI ribonucleoside t 82.1 6.6 0.00014 34.5 7.6 44 60-104 317-360 (394)
190 TIGR02718 sider_RhtX_FptX side 82.0 7.5 0.00016 33.8 7.9 34 68-101 117-150 (390)
191 PRK10473 multidrug efflux syst 81.5 5.8 0.00012 34.5 6.9 19 4-22 257-275 (392)
192 COG2211 MelB Na+/melibiose sym 81.0 4.2 9E-05 37.1 5.9 93 4-103 290-389 (467)
193 PF01306 LacY_symp: LacY proto 78.3 12 0.00026 33.6 7.9 79 5-92 278-356 (412)
194 COG0477 ProP Permeases of the 78.2 17 0.00037 28.8 8.3 41 62-102 108-150 (338)
195 PRK11195 lysophospholipid tran 77.6 5.3 0.00012 35.1 5.5 40 66-105 311-351 (393)
196 TIGR00926 2A1704 Peptide:H+ sy 77.3 8 0.00017 36.9 6.9 40 67-106 104-146 (654)
197 KOG2816|consensus 76.6 6 0.00013 36.1 5.6 44 62-105 126-169 (463)
198 COG3104 PTR2 Dipeptide/tripept 74.6 0.76 1.6E-05 42.0 -0.7 94 5-106 81-177 (498)
199 TIGR00788 fbt folate/biopterin 73.8 2.9 6.2E-05 37.9 2.8 50 56-105 359-408 (468)
200 TIGR00924 yjdL_sub1_fam amino 72.7 24 0.00051 32.0 8.5 46 60-105 393-438 (475)
201 TIGR00902 2A0127 phenyl propri 70.8 12 0.00025 32.6 5.9 38 66-105 112-149 (382)
202 PRK11128 putative 3-phenylprop 70.8 7.5 0.00016 33.8 4.7 35 69-105 115-149 (382)
203 PRK09584 tppB putative tripept 69.5 34 0.00074 31.2 8.9 37 65-101 399-435 (500)
204 COG2211 MelB Na+/melibiose sym 68.2 17 0.00037 33.2 6.4 53 52-104 116-169 (467)
205 TIGR00769 AAA ADP/ATP carrier 68.1 43 0.00094 30.7 9.1 47 60-106 140-187 (472)
206 KOG2504|consensus 65.2 38 0.00082 31.3 8.2 56 51-106 391-446 (509)
207 COG2814 AraJ Arabinose efflux 64.5 37 0.00081 30.3 7.7 85 2-97 263-348 (394)
208 COG2270 Permeases of the major 63.0 8.3 0.00018 34.7 3.3 92 3-101 76-168 (438)
209 TIGR00788 fbt folate/biopterin 62.9 10 0.00023 34.3 4.1 23 201-223 390-412 (468)
210 KOG3762|consensus 62.3 11 0.00023 35.3 4.0 79 3-90 423-501 (618)
211 KOG0252|consensus 60.8 2.8 6E-05 38.3 -0.0 82 2-89 100-185 (538)
212 PRK10207 dipeptide/tripeptide 58.9 64 0.0014 29.5 8.5 45 60-104 391-435 (489)
213 KOG2533|consensus 55.5 27 0.00058 32.2 5.4 56 51-106 137-192 (495)
214 KOG0637|consensus 53.5 34 0.00073 31.4 5.6 43 60-102 154-197 (498)
215 PF03209 PUCC: PUCC protein; 52.9 53 0.0012 29.5 6.7 43 60-102 101-143 (403)
216 TIGR01272 gluP glucose/galacto 52.6 19 0.00042 30.6 3.8 51 57-107 19-69 (310)
217 PF03092 BT1: BT1 family; Int 48.7 1.1E+02 0.0023 27.5 8.1 50 54-104 92-144 (433)
218 PF06609 TRI12: Fungal trichot 46.4 1.4E+02 0.0031 28.3 8.8 53 52-104 409-461 (599)
219 TIGR00889 2A0110 nucleoside tr 45.4 94 0.002 27.5 7.2 16 6-21 58-74 (418)
220 PRK15462 dipeptide/tripeptide 44.4 1.1E+02 0.0023 28.3 7.5 36 68-103 397-433 (493)
221 KOG2615|consensus 44.0 1E+02 0.0022 27.9 6.9 48 59-106 363-410 (451)
222 PRK09848 glucuronide transport 43.5 1.2E+02 0.0025 26.9 7.6 17 208-224 274-290 (448)
223 PRK15403 multidrug efflux syst 42.8 9.6 0.00021 33.7 0.5 36 185-224 42-77 (413)
224 KOG2563|consensus 41.1 1E+02 0.0022 28.3 6.6 28 74-101 166-193 (480)
225 KOG4686|consensus 34.6 1.8E+02 0.0039 25.5 6.8 40 67-106 371-410 (459)
226 COG5336 Uncharacterized protei 32.4 51 0.0011 23.8 2.7 11 48-58 74-84 (116)
227 PF11947 DUF3464: Protein of u 32.3 1.7E+02 0.0036 22.6 5.7 30 62-91 108-137 (153)
228 PF02487 CLN3: CLN3 protein; 30.8 2.6E+02 0.0057 25.1 7.5 45 60-104 347-391 (402)
229 KOG2532|consensus 30.2 2E+02 0.0044 26.2 6.9 29 78-106 387-415 (466)
230 PF07274 DUF1440: Protein of u 29.0 55 0.0012 24.6 2.5 33 57-89 57-89 (135)
231 COG0738 FucP Fucose permease [ 28.6 72 0.0016 28.8 3.6 49 56-106 332-380 (422)
232 TIGR00805 oat sodium-independe 27.9 64 0.0014 30.6 3.4 52 65-120 535-587 (633)
233 PF02343 TRA-1_regulated: TRA- 26.7 17 0.00038 27.0 -0.5 18 184-201 78-95 (131)
234 KOG3098|consensus 26.6 2.1E+02 0.0045 26.3 6.2 78 2-89 66-143 (461)
235 KOG0253|consensus 26.0 32 0.0007 31.0 1.0 14 8-21 135-148 (528)
236 KOG3626|consensus 24.7 67 0.0014 31.2 2.9 65 52-120 590-655 (735)
237 KOG2533|consensus 24.0 2.5E+02 0.0054 25.9 6.4 43 63-105 382-425 (495)
238 PTZ00207 hypothetical protein; 23.3 2.6E+02 0.0055 26.5 6.4 45 55-104 459-503 (591)
239 TIGR01301 GPH_sucrose GPH fami 20.1 4.9E+02 0.011 23.9 7.5 41 59-99 391-433 (477)
No 1
>TIGR00898 2A0119 cation transport protein.
Probab=99.50 E-value=1.3e-14 Score=131.45 Aligned_cols=110 Identities=26% Similarity=0.495 Sum_probs=84.3
Q ss_pred cccccccccCcccCcCCCCCcccccccccCCCC-CCCCcceeecCCCCCC---CCCCCC----CCCCCcccC-CCeeeCC
Q psy14099 110 VLGDSRCLIPECEHAANTSYLTPWLNHAVPYKD-GYPQNCFRYGHIGEGN---GCNPTS----FNKSHVIKC-NAWVFQT 180 (224)
Q Consensus 110 ~~p~~~C~~p~~~~~~n~~~~~~~~n~tiP~~~-~~~~~C~~y~~~~~~~---~~~~~~----~~~~~~~~C-~~w~yd~ 180 (224)
.+|||||+.|+.. +.+ .+++++.++|.+. +++++|++|+.++... .+.... .......+| ++|+|+.
T Consensus 33 ~~p~~~c~~~~~~---~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (505)
T TIGR00898 33 ATPEHHCRLPDAA---NLS-SRCELNLTLPRLPDGRPESCLRFMVDQWANPSLLGCEPLKLSDLGLAATEPCLDGWEYSY 108 (505)
T ss_pred CCCCcccCCCCcc---cCC-hHhHhceeccCCCCCCCCCCccccccchhhhcccccccchhcccCCCCCCCCCCCcEecC
Confidence 5899999998543 323 3357888888765 5789999998863221 111110 011345688 8999997
Q ss_pred C--ccccccccccccccchhhhhHHHHHHHHhhhhccceeeeccCC
Q psy14099 181 D--EVNLLNEFNLECDENRWKLTIVGSIDGLGALLGSPFCAFISDK 224 (224)
Q Consensus 181 ~--~~tivte~~lVC~~~~~~~~~~~s~~~~G~~~G~~~~G~lsDr 224 (224)
+ ..++++||||+| |++++..+.++++++|.++|++++|+++||
T Consensus 109 ~~~~~~i~~e~~l~c-~~~~~~~~~~s~~~~g~~~g~~~~g~l~Dr 153 (505)
T TIGR00898 109 DTFSSTIVTEWDLVC-EDAWKVDLTQSCFFVGVLLGSFVFGYLSDR 153 (505)
T ss_pred CcccccEEEEeccee-chHHHHHHHHHHHHHHHHHHHHhHHHhhhh
Confidence 6 589999999999 899999999999999999999999999997
No 2
>KOG0253|consensus
Probab=99.42 E-value=1.3e-13 Score=118.64 Aligned_cols=94 Identities=19% Similarity=0.271 Sum_probs=71.4
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL 81 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 81 (224)
|-++..+++||.|||+.+...+...+++...++.. . ......++.+.++++.++++.+.|+|++|+|||.+
T Consensus 397 GlLIt~~iverlGRKkTMal~l~~f~iflfll~~c-------~--~rn~~tvllf~arafisg~fqvaYvYtPEVyPTav 467 (528)
T KOG0253|consen 397 GLLITGVIVERLGRKKTMALSLILFGIFLFLLTTC-------K--TRNAYTVLLFTARAFISGAFQVAYVYTPEVYPTAV 467 (528)
T ss_pred chhHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHh-------c--CcchhHHHHHHHHHHHhchheEEEEecCcccchhh
Confidence 45678888999999998765333222211111210 1 12235567788899999999999999999999999
Q ss_pred HHHHHHHHHHHHhhhccccccee
Q psy14099 82 RQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 82 R~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
|++|+|.|+.++|+|+++.|++.
T Consensus 468 RatgvGtcSsmaRIggI~~p~iA 490 (528)
T KOG0253|consen 468 RATGVGTCSSMARIGGIFSPVIA 490 (528)
T ss_pred hhcchhhhhhHHhhhhhhhhHHH
Confidence 99999999999999999999876
No 3
>KOG0255|consensus
Probab=98.93 E-value=8.3e-10 Score=100.76 Aligned_cols=54 Identities=28% Similarity=0.583 Sum_probs=50.2
Q ss_pred cccC-CCeeeCCC--ccccccccccccccchhhhhHHHHHHHHhhhhccceeeeccCC
Q psy14099 170 VIKC-NAWVFQTD--EVNLLNEFNLECDENRWKLTIVGSIDGLGALLGSPFCAFISDK 224 (224)
Q Consensus 170 ~~~C-~~w~yd~~--~~tivte~~lVC~~~~~~~~~~~s~~~~G~~~G~~~~G~lsDr 224 (224)
...| ++|+|+.+ ..|+++|||+|| ++++++.+.|++|++|.++|++++|++|||
T Consensus 88 ~~~~~~~~~~~~~~~~~s~~~~~~~~c-~~~~~~~~~~s~~~~G~~vG~~i~g~lsD~ 144 (521)
T KOG0255|consen 88 IVICLDGWVYDYGSSVYSIVSEWNLVC-DSSTLVALGQSLFFLGVLVGSLIFGPLSDR 144 (521)
T ss_pred cccccceeEecCCCCcccccchhceee-CcHhHHHHHHHHHHHHHHHHHhhheehHhh
Confidence 3567 89999977 689999999999 899999999999999999999999999997
No 4
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=98.90 E-value=3.6e-09 Score=100.45 Aligned_cols=96 Identities=15% Similarity=0.109 Sum_probs=66.7
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL 81 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 81 (224)
+.+++.++.||+|||++++.++....++.. ++ .+. ++ .. ..+++.++..++..+.++..+++++|+|||+.
T Consensus 611 G~il~g~L~Dr~GRr~~l~~~~~lsai~~l-l~-~~~-----~s-~~-~ll~~~~l~g~~~~~~~~~~~a~~aEl~Pt~~ 681 (742)
T TIGR01299 611 GNIVSALLMDKIGRLRMLAGSMVLSCISCF-FL-SFG-----NS-ES-AMIALLCLFGGLSIAAWNALDVLTVELYPSDK 681 (742)
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-HH-HHH-----cc-HH-HHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHH
Confidence 567788888899999887664333222222 11 111 21 12 23333344455566677889999999999999
Q ss_pred HHHHHHHHHHHHhhhcccccceeeh
Q psy14099 82 RQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 82 R~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
|++++|+.++.+++|++++|++...
T Consensus 682 Rgta~Gi~~~~~rlGaiigp~i~g~ 706 (742)
T TIGR01299 682 RATAFGFLNALCKAAAVLGILIFGS 706 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999987753
No 5
>TIGR00898 2A0119 cation transport protein.
Probab=98.70 E-value=6.1e-08 Score=87.85 Aligned_cols=96 Identities=25% Similarity=0.477 Sum_probs=66.1
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.+++.++.||.|||..+..+.....+.+..+. +. +....+...++.+++.++....+...+++.+|+||+++|
T Consensus 372 ~~~~~~l~dr~grr~~~~~~~~~~~~~~l~~~--~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 444 (505)
T TIGR00898 372 KLITLLLIDRLGRRYTMAASLLLAGVALLLLL--FV-----PVDLYFLRTALAVLGKFGITSAFQMVYLYTAELYPTVVR 444 (505)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHH--Hc-----CCCchHHHHHHHHHHHHHHHHHHHHHHHHhcccccHHHH
Confidence 45566778888888876653332222222111 11 111123344445566666777778889999999999999
Q ss_pred HHHHHHHHHHHhhhcccccceee
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++++|+.+..+++|++++|++..
T Consensus 445 ~~~~g~~~~~~~ig~~i~p~i~~ 467 (505)
T TIGR00898 445 NLGVGVCSTMARVGSIISPFLVY 467 (505)
T ss_pred hhhHhHHHHHHHHHHHHHhHHHH
Confidence 99999999999999999998775
No 6
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=98.63 E-value=7.3e-08 Score=87.71 Aligned_cols=97 Identities=18% Similarity=0.271 Sum_probs=58.8
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHH-HhhhhHhhhcccccchHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGIT-SAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ElfPt~vR 82 (224)
+++.++.||.|||++++.+...+.+++.++.. .. . ..... ....+.++..++.. +.....+++++|+||+++|
T Consensus 353 ~~~~~l~dr~gRR~~l~~~~~~~~~~~~~l~~-~~---~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~E~~p~~~R 426 (502)
T TIGR00887 353 WVTVFLVDIIGRKPIQLMGFFILTVLFFVLGF-AY---N-HLSTH-GFLAIYVLAQFFANFGPNATTFIVPGEVFPTRYR 426 (502)
T ss_pred HHHHHHhhhhcchhHHHHHHHHHHHHHHHHHH-HH---H-hcchh-HHHHHHHHHHHHHhcCCCchhhhhhhccCchhHH
Confidence 44566889999998866544332222221111 10 0 00011 11122222222222 2344678999999999999
Q ss_pred HHHHHHHHHHHhhhcccccceeeh
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+++.|+.+.+++++++++|++...
T Consensus 427 ~~~~g~~~~~~~~~~~~~~~~~~~ 450 (502)
T TIGR00887 427 STAHGISAASGKAGAIIGQFGFLY 450 (502)
T ss_pred HHHHHHHHHHhhhHHHHHHHHhhh
Confidence 999999999999999999987754
No 7
>KOG0255|consensus
Probab=98.39 E-value=1.2e-06 Score=80.05 Aligned_cols=100 Identities=20% Similarity=0.218 Sum_probs=69.9
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.....+..++.|||..+..+.......+. ..... + .....+...++.++++++.+.++...+.+.+|++||.+|
T Consensus 367 ~~~~~~~~~~~gR~~~~~~~~~~~~~~~~-~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~el~pt~~r 440 (521)
T KOG0255|consen 367 YFRNGLLLPEFGRRPPLFLSLFLAGIGLL-LFGWL----P-DDLGGWLHWILPLLGKFFIGSAFNLIFLYSAELIPTVVR 440 (521)
T ss_pred HHHHHHHHHHhCcHHHHHHHHHHHHHHHH-HHHHh----h-ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccHHHH
Confidence 34456677888888876553222221111 11111 1 111113456677888888899998889999999999999
Q ss_pred HHHHHHHHHHHhhhcccccceeehhc
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFLLLG 108 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~~~~ 108 (224)
+++++.++..+++++.++|++.....
T Consensus 441 ~~~~~~~~~~~~~~~i~ap~~~~~~~ 466 (521)
T KOG0255|consen 441 NTAVGAISAAARLGSILAPLFPLLLR 466 (521)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999886543
No 8
>PRK09952 shikimate transporter; Provisional
Probab=98.28 E-value=2.9e-06 Score=76.01 Aligned_cols=51 Identities=14% Similarity=0.097 Sum_probs=39.8
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHh-hhcccccceeeh
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGR-IGQVIAPQVFLL 106 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~-~~~~~~~~~~~~ 106 (224)
++..+..+...+..+.+.+|+||++.|+++.|+.+..++ +++.++|++...
T Consensus 351 ~l~~~~~~~~~~~~~~~~~e~~p~~~r~tg~g~~~~~~~~lgg~~~p~i~g~ 402 (438)
T PRK09952 351 MLANIAHDMVVCVQQPMFTEMFGASYRYSGAGVGYQVASVVGGGFTPFIAAA 402 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHHCCcchhHHHHhHHHHHHHHHHHHHHHHHHHH
Confidence 333344445566788999999999999999999888776 788899987754
No 9
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=98.26 E-value=1.7e-08 Score=90.11 Aligned_cols=104 Identities=17% Similarity=0.302 Sum_probs=62.7
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCC-chhHHHHHHHHHHHHHHHHhhh-hHhhhcccccch
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL-HHVVFRQTLFLIGITGITSAYT-VLYVNTVDMFPT 79 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ElfPt 79 (224)
+.+++.++.||.|||++++.+...++++...+. .......+.+ ......+++.++..++++..++ ..+.+.+|+|||
T Consensus 302 ~~~~~~~~~~~~GRr~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~i~~~~l~~~~~~~g~~~~~~~~~~ElfPt 380 (451)
T PF00083_consen 302 GTLLAIFLIDRFGRRKLLIIGLLLMAICSLILG-IIFFLGVSSSSWWSILSIVFLALFFAFFSLGWGPLPWIYTAELFPT 380 (451)
T ss_pred ccccccccccccccccccccccccccccccccc-cccccccccccccccccceeeeeccccccccccccccccccccccc
Confidence 455677888999999876664433332222111 0010111111 0112222233333334443444 567999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 80 PLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 80 ~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++|++++|++...+++++.+.|++...
T Consensus 381 ~~R~~~~~~~~~~~~i~~~i~~~~~~~ 407 (451)
T PF00083_consen 381 KVRSTGIGLSYAVGRIGGFIIPFLFPY 407 (451)
T ss_pred ccccccccccccccccccccccccccc
Confidence 999999999999999999999987654
No 10
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=98.22 E-value=3.3e-06 Score=76.72 Aligned_cols=47 Identities=23% Similarity=0.196 Sum_probs=38.3
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++.+...+....+.+|+||+++|++++|+.++.+++++.++|++...
T Consensus 354 ~~~~~~~g~~~~~~~~~~p~~~Rg~~~g~~~~~~~~~g~~~p~i~g~ 400 (490)
T PRK10642 354 VILNCFTGVMASTLPAMFPTHIRYSALAAAFNISVLVAGLTPTLAAW 400 (490)
T ss_pred HHHHHHHHHHHHHHHHHCCCccchHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44445556677888999999999999999888899888888887654
No 11
>KOG0254|consensus
Probab=98.19 E-value=5.3e-06 Score=75.91 Aligned_cols=101 Identities=16% Similarity=0.214 Sum_probs=65.0
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCC---CCCchhHHHHHHHHHHHHHHHHhhh-hHhhhcccccc
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFP---TPLHHVVFRQTLFLIGITGITSAYT-VLYVNTVDMFP 78 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ElfP 78 (224)
.+++.+++||.|||++++.+..++..++.++......... ......+..++..++....++..++ +.|++.+|+||
T Consensus 346 t~~~~~lvd~~gRr~lll~s~~~m~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~f~~g~g~v~w~~~sEifp 425 (513)
T KOG0254|consen 346 TLVATYLVDRFGRRKLLLFGAAGMSICLVILAVVGVFALYYPNSSKGAGWLAIVFLCLFIFSFAIGWGPVPWVIVSEIFP 425 (513)
T ss_pred HHHHHHHHHHhccHHHHHHhHHHHHHHHHHHHHHHHHhccCCCcccchhHHHHHHHHHHHHHHhcccccchhhhhhccCc
Confidence 4566788899999999888666655544422221110000 0111233344444444455555554 57899999999
Q ss_pred hHHHHHHHHHHHHHHhhhcccccce
Q psy14099 79 TPLRQSLLAFCSMIGRIGQVIAPQV 103 (224)
Q Consensus 79 t~vR~~g~g~~~~~~~~~~~~~~~~ 103 (224)
.++|+++.+++...+++.+.+....
T Consensus 426 ~~~r~~~~s~~~~~n~~~~~~v~~~ 450 (513)
T KOG0254|consen 426 LRLRSKGASLAVAVNWLWNFLISFF 450 (513)
T ss_pred HhHHhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888766543
No 12
>KOG0252|consensus
Probab=98.19 E-value=4.5e-07 Score=80.67 Aligned_cols=100 Identities=14% Similarity=0.241 Sum_probs=67.1
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHH-HHHhhhhHhhhcccccchH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITG-ITSAYTVLYVNTVDMFPTP 80 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ElfPt~ 80 (224)
|+.+...++|+.|||+..+.++..+.+.+.++.. . + +.........++..+..++ .-+..+...++++|+|||+
T Consensus 364 Gyw~tv~~id~iGRk~iq~~GF~~~~i~~~~~~~-~--y--~~~~~~~Gf~v~y~l~~ff~NFGPn~ttfivpaE~FPar 438 (538)
T KOG0252|consen 364 GYWFTVYFIDIIGRKYIQLMGFFIMTIFFFVIAG-P--Y--NQLENTIGFVVLYSLTFFFGNFGPNATTFIVPAEIFPAR 438 (538)
T ss_pred ceeEEEEEeehhhhHHHHHhhHHHHHHHHHHHcC-C--c--ccccccCceeehHHHHHHHHhcCCCceeEEeehhhchHH
Confidence 4455667889999999988877776654442221 1 1 1011111223333333333 3344557899999999999
Q ss_pred HHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 81 LRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 81 vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+|+++.|++.+.|..|++++.+.+..
T Consensus 439 vR~t~hGIsAA~GK~GAivg~~~F~~ 464 (538)
T KOG0252|consen 439 VRSTCHGISAASGKAGAIVGAFGFLY 464 (538)
T ss_pred HhhhhhhHHHHhccchHHHHHHHhhH
Confidence 99999999999999999999887654
No 13
>KOG0569|consensus
Probab=98.04 E-value=5.4e-06 Score=75.08 Aligned_cols=106 Identities=13% Similarity=0.178 Sum_probs=67.5
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCch-hHHHHHHHHHHHHHHHHhhh-hHhhhcccccch
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHH-VVFRQTLFLIGITGITSAYT-VLYVNTVDMFPT 79 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~ElfPt 79 (224)
..+++.+++||.|||++++.+...+.+...++.+.+. ........ .+..++..+++.+.++.+.+ +-|.+.+|+||.
T Consensus 321 ~t~~~~~lid~~gRRpLll~~~~~~~~~~~~~~~~~~-l~~~~~~~~~y~~i~~~~~~~~~f~~G~gpi~~fi~aELf~~ 399 (485)
T KOG0569|consen 321 STLVSPFLIDRLGRRPLLLISLSLMAVALLLMSIALF-LSNSFGSWLSYLCIAAIFLFIISFAIGPGPIPWFIGAELFPQ 399 (485)
T ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHH-HHHHhhhHHHHHHHHHHHHHHHhhhcCCCchhHHHHHHhCCc
Confidence 3577889999999999988755444333322221111 00000011 11233444555555555544 468999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccceeehhc
Q psy14099 80 PLRQSLLAFCSMIGRIGQVIAPQVFLLLG 108 (224)
Q Consensus 80 ~vR~~g~g~~~~~~~~~~~~~~~~~~~~~ 108 (224)
.-|.++.+++..+.++.+++..+.++..+
T Consensus 400 ~~R~aa~s~~~~~~w~~~fiv~~~fp~l~ 428 (485)
T KOG0569|consen 400 SARSAAQSVATAVNWLSNFIVGFAFPPLQ 428 (485)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999888777665433
No 14
>TIGR00880 2_A_01_02 Multidrug resistance protein.
Probab=98.02 E-value=3.6e-05 Score=56.34 Aligned_cols=93 Identities=13% Similarity=0.132 Sum_probs=57.3
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHH
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQS 84 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 84 (224)
....+.||.|||+.+..+......... ... . ... .+...+..++..+..+......+.+..|.+|++.|++
T Consensus 17 ~~g~~~d~~g~~~~~~~~~~~~~~~~~-~~~-~------~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (141)
T TIGR00880 17 LSGLLTDRFGRKPVLLVGLFIFVLSTA-MFA-L------SSN-ITVLIIARFLQGFGAAFALVAGAALIADIYPPEERGV 87 (141)
T ss_pred hHHHHHhhcchhHHHHHHHHHHHHHHH-HHH-H------hcc-HHHHHHHHHHHHHHHHHHHHhHHHHHHHHCChhhhhH
Confidence 344556777777776553322222111 111 1 111 2223333334444445555667889999999999999
Q ss_pred HHHHHHHHHhhhcccccceeeh
Q psy14099 85 LLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 85 g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+.++.+....++..++|.+...
T Consensus 88 ~~~~~~~~~~~g~~~~~~~~~~ 109 (141)
T TIGR00880 88 ALGLMSAGIALGPLLGPPLGGV 109 (141)
T ss_pred HHHHHHHhHHHHHHHhHHhHHH
Confidence 9999999999999988876654
No 15
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=98.01 E-value=1.7e-05 Score=70.80 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=32.0
Q ss_pred hhhhHhhhcccccchHHHHHHHHHHHHHHhh-hcccccceee
Q psy14099 65 AYTVLYVNTVDMFPTPLRQSLLAFCSMIGRI-GQVIAPQVFL 105 (224)
Q Consensus 65 ~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~-~~~~~~~~~~ 105 (224)
.....+.+.+|+||++.|++++|++++.+++ ++...|++..
T Consensus 353 ~~~~~~~~~~e~fp~~~r~t~~g~~~~~g~~~~g~~~p~~~~ 394 (432)
T PRK10406 353 YTSISGILKAEMFPAQVRALGVGLSYAVANALFGGSAEYVAL 394 (432)
T ss_pred HHHHHHHHHHHHCCCCccchhhhHHHHHHHHHHHhHHHHHHH
Confidence 3345778999999999999999999998886 3445666444
No 16
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.99 E-value=1.7e-05 Score=71.16 Aligned_cols=97 Identities=18% Similarity=0.221 Sum_probs=56.4
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhh-hhHhhhcccccchHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAY-TVLYVNTVDMFPTPLR 82 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ElfPt~vR 82 (224)
+++..+.||.|||++++.+...+.+....+.. .. . ............++..++....+ ...+.+.+|+||++.|
T Consensus 324 ~~~g~l~dr~g~r~~~i~~~~~~~v~~~~l~~-~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~p~~~r 398 (479)
T PRK10077 324 VLAIMTVDKFGRKPLQIIGALGMAIGMFSLGT-AF---Y-TQAPGIVALLSMLFYVAAFAMSWGPVCWVLLSEIFPNAIR 398 (479)
T ss_pred HHHHHHHHHhcChHHHHHhHHHHHHHHHHHHH-HH---h-cCcccHHHHHHHHHHHHHHhccccchhHHHhHhhCChhHH
Confidence 44556678888888776644433332221111 10 0 11111111112222222223233 3468999999999999
Q ss_pred HHHHHHHHHHHhhhcccccceee
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++++|+.+..+++++.+++++.+
T Consensus 399 ~~~~g~~~~~~~~g~~~~~~~~p 421 (479)
T PRK10077 399 GKALAIAVAAQWIANYFVSWTFP 421 (479)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhH
Confidence 99999999999999988876654
No 17
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=97.96 E-value=1.2e-05 Score=70.57 Aligned_cols=53 Identities=13% Similarity=0.036 Sum_probs=43.1
Q ss_pred HHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 54 LFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+..+..++....++..+.+.+|+||++.|++++|+.+..+|+++..+|.+...
T Consensus 286 ~~~l~~~~~~~~~~~~~~~~~~~~p~~~rgt~~G~~~~~g~~~~~~~~~~~~~ 338 (368)
T TIGR00903 286 FIGIAGLLMLPAYAIIMDWIGKFCDKELHGKAAGAIGFTSRAISVALALAAML 338 (368)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHhcchhhcCcccchhhHHHHHHHHHHHHHHHH
Confidence 33444455556667788999999999999999999999999999888876643
No 18
>TIGR00887 2A0109 phosphate:H+ symporter. This model represents the phosphate uptake symporter subfamily of the major facilitator superfamily (pfam00083).
Probab=97.85 E-value=4.9e-05 Score=69.21 Aligned_cols=98 Identities=12% Similarity=0.096 Sum_probs=58.8
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCch--hHHHHHHHHHHHHHHHHhhhhHhhhcccccch
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHH--VVFRQTLFLIGITGITSAYTVLYVNTVDMFPT 79 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 79 (224)
+.++...+.||.|||+.+..+.....+... +.. +. ++.... ....++.-++..++.+..+.....|.+|.+|.
T Consensus 72 g~~~~g~l~d~~Grr~~~~~~~~~~~v~~~-~~~-~~---~~~~~~~~~~~~~~~r~l~G~~~g~~~~~~~~~~~e~~p~ 146 (502)
T TIGR00887 72 GQLFFGWLADKLGRKRVYGMELIIMIIATV-ASG-LS---PGSSPKSVMATLCFWRFWLGVGIGGDYPLSAIITSEFATK 146 (502)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHHHHHHHH-HHH-Hc---cCcccchHHHHHHHHHHHHHHHHhhhhHHHHHHHHHhcCh
Confidence 345566777888888776553322222111 111 11 111110 12233333344455555666789999999999
Q ss_pred HHHHHHHHHHHHHHhhhccccccee
Q psy14099 80 PLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 80 ~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+.|++++++.+....+|..+++.+.
T Consensus 147 ~~Rg~~~~~~~~~~~~g~~~g~~~~ 171 (502)
T TIGR00887 147 KWRGAMMAAVFAMQGFGILAGAIVA 171 (502)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999888888877777654
No 19
>TIGR01299 synapt_SV2 synaptic vesicle protein SV2. This model describes a tightly conserved subfamily of the larger family of sugar (and other) transporters described by pfam model pfam00083. Members of this subfamily include closely related forms SV2A and SV2B of synaptic vesicle protein from vertebrates and a more distantly related homolog (below trusted cutoff) from Drosophila melanogaster. Members are predicted to have two sets of six transmembrane helices.
Probab=97.77 E-value=7.8e-05 Score=71.22 Aligned_cols=92 Identities=16% Similarity=0.097 Sum_probs=56.2
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL 81 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 81 (224)
+.++...+.||.|||+.++.+++...+... +. .+. + . .+..++.-++..++.++.....+.+.+|.+|.+.
T Consensus 218 G~li~G~LsDR~GRR~~lii~lil~~i~~l-l~-afa-----~-s-~~~llv~R~l~G~g~g~~~p~~~~~isE~~p~~~ 288 (742)
T TIGR01299 218 GAFFWGGLADKLGRKQCLLICLSVNGFFAF-FS-SFV-----Q-G-YGFFLFCRLLSGFGIGGAIPIVFSYFAEFLAQEK 288 (742)
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHHHHH-HH-HHH-----h-h-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
Confidence 345556677888888776653322221111 11 111 1 1 2223334444455566666778999999999999
Q ss_pred HHHHHHHHHHHHhhhcccccc
Q psy14099 82 RQSLLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 82 R~~g~g~~~~~~~~~~~~~~~ 102 (224)
|++.+++......+|+++++.
T Consensus 289 Rg~~~g~~~~~~~iG~ila~~ 309 (742)
T TIGR01299 289 RGEHLSWLCMFWMIGGIYAAA 309 (742)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999999877777776666654
No 20
>TIGR00895 2A0115 benzoate transport.
Probab=97.76 E-value=0.00014 Score=62.90 Aligned_cols=94 Identities=20% Similarity=0.216 Sum_probs=59.7
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.++...+.||.+||.++.......+..+. +.. .. . . .....+..++..++.+......+.+.+|.+|.+.|
T Consensus 302 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~-~~-----~-~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 372 (398)
T TIGR00895 302 SIIFGWLADRLGPRVTALLLLLGAVFAVL-VGS-TL-----F-S-PTLLLLLGAIAGFFVNGGQSGLYALMALFYPTAIR 372 (398)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHH-HHH-Hh-----h-C-HHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCHHHH
Confidence 34556677888888554432222222121 111 00 1 1 22233334444455666667788999999999999
Q ss_pred HHHHHHHHHHHhhhcccccceee
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
+++.|+.+..+.+|+.++|.+..
T Consensus 373 g~~~g~~~~~~~~g~~~g~~~~G 395 (398)
T TIGR00895 373 ATGVGWAIGIGRLGAIIGPILAG 395 (398)
T ss_pred HHHHHHHHHHHHHHHHHHHHhHH
Confidence 99999999999999999987653
No 21
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.75 E-value=9.2e-05 Score=65.04 Aligned_cols=95 Identities=15% Similarity=0.155 Sum_probs=59.1
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.++...+.||.|||+.+..........+. .. ... + . .+...+..++..++..+.....+.+.+|.+|++.|
T Consensus 272 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~-~~-~~~-----~-~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~~~ 342 (406)
T PRK11551 272 SLLIGALMDRLRPRRVVLLIYAGILASLA-AL-AAA-----P-S-FAGMLLAGFAAGLFVVGGQSVLYALAPLFYPTQVR 342 (406)
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHHH-HH-Hhc-----C-c-HHHHHHHHHHHHHHHHhHHHHHHHHHHHHcchhhh
Confidence 34455567788887776543332222221 11 111 1 1 22222233333344445556778899999999999
Q ss_pred HHHHHHHHHHHhhhcccccceeeh
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+++.|+.+..+++|+.++|.+...
T Consensus 343 g~~~g~~~~~~~~g~~~g~~~~g~ 366 (406)
T PRK11551 343 GTGVGAAVAVGRLGSMAGPLLAGQ 366 (406)
T ss_pred hhhhhHHHHhhhHHHHHHhhhHhh
Confidence 999999999999999999987754
No 22
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.63 E-value=0.00014 Score=63.19 Aligned_cols=47 Identities=26% Similarity=0.398 Sum_probs=39.2
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++..+.++..+.+.+|.+|++.|++++|+.+..+.+++.++|.+...
T Consensus 340 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~g~~~~g~ 386 (405)
T TIGR00891 340 MLVQGIWGILPKHLGEYFPTDQRAAGLGFTYQLGNLGGALAPIIGAL 386 (405)
T ss_pred HHHccchhhHHHHHhhhCCcchhHHHhhHHHHHHHHHHHHHHHHHHH
Confidence 33444556677889999999999999999999999999999987754
No 23
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=97.62 E-value=6.4e-05 Score=68.59 Aligned_cols=41 Identities=15% Similarity=0.228 Sum_probs=35.2
Q ss_pred hhHhhhcccccchH--HHHHHHHHHHHHHhhhcccccceeehh
Q psy14099 67 TVLYVNTVDMFPTP--LRQSLLAFCSMIGRIGQVIAPQVFLLL 107 (224)
Q Consensus 67 ~~~~~~~~ElfPt~--vR~~g~g~~~~~~~~~~~~~~~~~~~~ 107 (224)
+....+.+|+||++ .|.++.++.++.+++|+.++|.+....
T Consensus 119 ~~~~alv~elfp~~~~~R~sgf~i~Y~~~nlG~~iap~l~g~L 161 (493)
T PRK15462 119 SNVSCLLGELYEPTDPRRDGGFSLMYAAGNVGSIIAPIACGYA 161 (493)
T ss_pred ccHHHHHHHHCCCCCccccceehHHHHHHHHHHHHHHHHHHHH
Confidence 44568899999986 799999999999999999999887653
No 24
>PRK15075 citrate-proton symporter; Provisional
Probab=97.56 E-value=0.00019 Score=64.07 Aligned_cols=47 Identities=11% Similarity=0.087 Sum_probs=35.4
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhh-hcccccceeeh
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRI-GQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~-~~~~~~~~~~~ 106 (224)
++.+......+.+.+|.+|.+.|+++.|+.++.+++ ++.++|.+...
T Consensus 343 ~~~g~~~~~~~~~~~e~~p~~~rg~~~g~~~~~~~~~~g~~~p~~~g~ 390 (434)
T PRK15075 343 FLYGSYNGAMVVALTEVMPAEVRTAGFSLAYSLATAIFGGFTPAISTW 390 (434)
T ss_pred HHHHHHHhhHHHHHHHHCCCCccchheeHHHHHHHHHHhhhHHHHHHH
Confidence 333444445678899999999999999998877775 47778876643
No 25
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.54 E-value=0.00027 Score=62.49 Aligned_cols=40 Identities=10% Similarity=0.018 Sum_probs=35.1
Q ss_pred hhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 67 TVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
...+.+..|.+|++.|++++|+.+..+++++.++|.+...
T Consensus 340 ~~~~~~~~~~~p~~~~g~~~g~~~~~~~~~~~~gp~~~g~ 379 (426)
T PRK12307 340 GLVPKFLYDYFPLEVRGLGTGLIYNLAATSGTFNSMAATW 379 (426)
T ss_pred HHHHHHHHHhCcHHHHhhhhhHHHHHHhHHHHHHHHHHHH
Confidence 4566788999999999999999999999999999987654
No 26
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.54 E-value=0.00031 Score=62.08 Aligned_cols=40 Identities=20% Similarity=0.326 Sum_probs=34.8
Q ss_pred hhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 67 TVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
...+.+.+|.+|++.|+++.|+.+....+++.++|.+...
T Consensus 402 ~~~~~~~~~~~p~~~~~~~~~~~~~~~~lg~~i~~~~~~~ 441 (481)
T TIGR00879 402 PVPWVIVSEIFPLSLRPKGISIAVAANWLANFIVGFLFPT 441 (481)
T ss_pred CeehhhhhccCChHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467888999999999999999999999999999876654
No 27
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=97.49 E-value=0.00024 Score=60.83 Aligned_cols=97 Identities=9% Similarity=0.015 Sum_probs=57.3
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.+.+..+.||.+||+.+..+............ .. +............+..+..+..+.....+.+|.+|.+.|
T Consensus 257 ~~~~g~l~dr~g~~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~~~~~~~~ 329 (377)
T TIGR00890 257 RPFLGALSDKIGRQKTMSIVFGISAVGMAAML--FI-----PMLNDVLFLATVALVFFTWGGTISLFPSLVSDIFGPANS 329 (377)
T ss_pred HHHHHHHHHHHhhhhhhhHHHHHHHHHHHHHH--Hc-----ccchhHHHHHHHHHHHHHhccchhccHHHHHHHhhhhhh
Confidence 34556677888888765543332222221111 11 111111122222233333344445567789999999999
Q ss_pred HHHHHHHHHHHhhhcccccceeeh
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++..|+.+....+|+.++|.+...
T Consensus 330 ~~~~g~~~~~~~~g~~~~~~~~g~ 353 (377)
T TIGR00890 330 AANYGFLYTAKAVAGIFGGLIASH 353 (377)
T ss_pred hhHhHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999986654
No 28
>TIGR00893 2A0114 d-galactonate transporter.
Probab=97.49 E-value=0.0002 Score=61.48 Aligned_cols=93 Identities=11% Similarity=0.022 Sum_probs=56.0
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+....+.||.|||+.+..+......... .. .+. + ..+...+..++..++.+........+.+|.+|.+.|+
T Consensus 47 ~~~g~l~d~~g~r~~~~~~~~~~~~~~~-~~-~~~-----~--~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~r~ 117 (399)
T TIGR00893 47 FPGGWLLDRFGARKTLAVFIVIWGVFTG-LQ-AFA-----G--AYVSLYILRVLLGAAEAPFFPGIILIVASWFPASERA 117 (399)
T ss_pred HhHHHHHHhcCcceeeHHHHHHHHHHHH-HH-HHH-----c--CHHHHHHHHHHHHHHHHhhhhHHHHHHHHhCCHHHHH
Confidence 3445566777777765443322221111 11 111 1 1222333333444444555566789999999999999
Q ss_pred HHHHHHHHHHhhhcccccceee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
+++++......+|..++|.+..
T Consensus 118 ~~~~~~~~~~~~g~~~~~~~~~ 139 (399)
T TIGR00893 118 TAVSIFNSAQGLGGIIGGPLVG 139 (399)
T ss_pred HHHHHHHHhchHHHHHHHHHHH
Confidence 9999999888888888877654
No 29
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=97.46 E-value=0.00061 Score=61.13 Aligned_cols=94 Identities=14% Similarity=0.175 Sum_probs=57.3
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
++...+.||.|||+.++.+.....+... +. .. .+. ....++.-++..++.+........+.+|.+|.+.|+
T Consensus 55 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~-~~------~~~-~~~l~~~~~~~G~~~~~~~~~~~~~i~~~~~~~~r~ 125 (485)
T TIGR00711 55 PLTGWLAKRFGTRRLFLISTFAFTLGSL-LC-GV------APN-LELMIIFRVIQGFGGGPLIPLSFSTLLNIYPPEKRG 125 (485)
T ss_pred HhHHHHHHHhCcHHHHHHHHHHHHHHHH-HH-hC------cCC-HHHHHHHHHHHHhhhhhHHHHHHHHHHHHCCHHHHH
Confidence 4455667888888776654333222221 11 11 111 222222333333334444556789999999999999
Q ss_pred HHHHHHHHHHhhhcccccceeeh
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++.++......+|..++|.+...
T Consensus 126 ~~~~~~~~~~~~g~~~g~~~~~~ 148 (485)
T TIGR00711 126 RAMAIWGLTVLVAPALGPTLGGW 148 (485)
T ss_pred HHHHHHHHHHHHHhhhhhccHhH
Confidence 99999988888888888876543
No 30
>PRK15075 citrate-proton symporter; Provisional
Probab=97.46 E-value=0.00028 Score=62.99 Aligned_cols=38 Identities=11% Similarity=0.031 Sum_probs=28.3
Q ss_pred hhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccc
Q psy14099 65 AYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 65 ~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~ 102 (224)
.+.....+.+|.+|.+.|++.+++......+|..+++.
T Consensus 134 ~~~~~~~~~~e~~p~~~rg~~~~~~~~~~~~g~~~g~~ 171 (434)
T PRK15075 134 ELGGVSVYLAEIATPGRKGFYTSWQSASQQVAVVFAAL 171 (434)
T ss_pred cHHHHHHHHHhhCCcccchHHHHHHHHHHHHHHHHHHH
Confidence 34456789999999999999999877665555544443
No 31
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.45 E-value=0.00078 Score=57.49 Aligned_cols=52 Identities=10% Similarity=-0.029 Sum_probs=39.5
Q ss_pred HHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 54 LFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
..++..+..+........+.+|++|.+.|++..|+.+....+|..++|.+..
T Consensus 98 ~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~~ 149 (365)
T TIGR00900 98 LAGILAIAQAFFTPAYQAMLPDLVPEEQLTQANSLSQAVRSLFYIVGPGIGG 149 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3333334444455567899999999999999999999888888888887654
No 32
>TIGR00879 SP MFS transporter, sugar porter (SP) family. This model represent the sugar porter subfamily of the major facilitator superfamily (pfam00083)
Probab=97.45 E-value=0.0004 Score=61.33 Aligned_cols=49 Identities=16% Similarity=0.190 Sum_probs=38.9
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
++..++.+..+.....+.+|.+|.+.|++++++.+....+|..++|.+.
T Consensus 135 ~l~G~~~~~~~~~~~~~i~~~~~~~~r~~~~~~~~~~~~~G~~~~~~~~ 183 (481)
T TIGR00879 135 VLLGIGVGIASALVPMYLSEIAPKALRGALTSLYQLAITFGILVAYGFG 183 (481)
T ss_pred HHHHhhhhHHHhHHHHHHHccCChhhhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3333444555566788999999999999999998888888888888766
No 33
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.43 E-value=0.00086 Score=59.56 Aligned_cols=40 Identities=15% Similarity=0.326 Sum_probs=34.8
Q ss_pred hhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 67 TVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
...+....|.+|++.|++++|+.+..+++|+.++|.+...
T Consensus 352 ~~~~~~~~~~~~~~~~~~a~g~~~~~~~~g~~~~p~~~g~ 391 (412)
T TIGR02332 352 AIFWTTPDQSISLQARAIAIAVINATGNIGSALSPFLIGI 391 (412)
T ss_pred hHHHhhcccccchHHHHHHHHHHHHhhhhhhhhhhhhccc
Confidence 3456777899999999999999999999999999987754
No 34
>TIGR00895 2A0115 benzoate transport.
Probab=97.42 E-value=0.00021 Score=61.74 Aligned_cols=93 Identities=13% Similarity=0.035 Sum_probs=56.4
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
++...+.||.|||+.+..+......... +. .+ ... .+...+..++..++.+..+.....+.+|.+|.+.|+
T Consensus 70 ~~~g~l~d~~g~~~~~~~~~~~~~~~~~-~~-~~------~~~-~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r~ 140 (398)
T TIGR00895 70 LFFGPLADRIGRKRVLLWSILLFSVFTL-LC-AL------ATN-VTQLLILRFLAGLGLGGLMPNLNALVSEYAPKRFRG 140 (398)
T ss_pred HHhHHHHHHhhhHHHHHHHHHHHHHHHH-HH-HH------ccc-hHHHHHHHHHHhcccccchhhHHHHHHHHcCHHhhc
Confidence 4455567788888776654332222222 11 11 111 222223333333444445567789999999999999
Q ss_pred HHHHHHHHHHhhhcccccceee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++.|+......+|..++|.+..
T Consensus 141 ~~~~~~~~~~~~g~~~~~~~~~ 162 (398)
T TIGR00895 141 TAVGLMFCGYPIGAAVGGFLAG 162 (398)
T ss_pred hhHhhHhhHHHHHHHHHHHHHH
Confidence 9999988888888887776553
No 35
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=97.41 E-value=0.00061 Score=59.67 Aligned_cols=93 Identities=15% Similarity=0.046 Sum_probs=54.6
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
++...+.||.|||+.++.+............ . .++ .....+..++..+..+..+...+.+.+|.+|.+.|+
T Consensus 56 ~~~G~l~Dr~g~r~~l~~~~~~~~i~~~~~~--~------~~~-~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~r~ 126 (392)
T PRK10473 56 LFAGKIADRSGRKPVAIPGAALFIIASLLCS--L------AET-SSLFLAGRFLQGIGAGCCYVVAFAILRDTLDDRRRA 126 (392)
T ss_pred HhHhHHHHHhCChHHHHHHHHHHHHHHHHHH--H------hCc-HHHHHHHHHHHHhhhhHHHHHHHHHHHHHcCHHHHH
Confidence 3445566777777766553332222221111 1 111 112222222323333444556788999999999999
Q ss_pred HHHHHHHHHHhhhcccccceee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++.++.+....++..++|.+..
T Consensus 127 ~~~~~~~~~~~i~~~~~~~i~~ 148 (392)
T PRK10473 127 KVLSLLNGITCIIPVLAPVLGH 148 (392)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888888887654
No 36
>TIGR02332 HpaX 4-hydroxyphenylacetate permease. This protein is a part of the Major Facilitator Superfamily (Pfam family pfam07690). Member of this family are found in a number of proteobacterial genomes, but only in the context of having genes for 4-hydroxyphenylacetate (4-HPA) degradation. The protein is characterized by Prieto, et al. (PubMed:9315705) as 4-hydroxyphenylacetate permease in E. coli, where 3-HPA and 3,4-dihydroxyphenylacetate are shown to competitively inhibit 4-HPA transport and therefore also interact specificially.
Probab=97.40 E-value=0.00055 Score=60.83 Aligned_cols=93 Identities=10% Similarity=-0.147 Sum_probs=53.7
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+....+.||.|||+.+..++....+... +. .+. ++ .....+.-++..++.+..+.....+.+|.||.+.|+
T Consensus 61 ~~~g~l~dr~G~r~~~~~~~~~~~~~~~-~~-~~~-----~~--~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~rg 131 (412)
T TIGR02332 61 IPSNIMLAIIGARRWIAGIMVLWGIAST-AT-MFA-----TG--PESLYLLRILVGIAEAGFLPGILLYLTFWFPAYFRA 131 (412)
T ss_pred hhHHHHHHHhChHHHHHHHHHHHHHHHH-HH-HHh-----cC--HHHHHHHHHHHHHHHhhHHHHHHHHHHHHcCHHHHH
Confidence 3445566788877776553332222111 11 111 11 112222223333344444455667889999999999
Q ss_pred HHHHHHHHHHhhhcccccceee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
+.+|+......+|..++|.+..
T Consensus 132 ~~~~~~~~~~~~g~~~~~~~~~ 153 (412)
T TIGR02332 132 RANALFMIAMPVTMALGLILSG 153 (412)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988887777777776543
No 37
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=97.39 E-value=0.00054 Score=59.38 Aligned_cols=93 Identities=16% Similarity=0.118 Sum_probs=56.1
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+....+.||.|||+.+..+......... .. ... + . .+...+..++..++.+........+.+|.+|.+.|+
T Consensus 44 ~~~g~l~d~~g~~~~~~~~~~~~~i~~~-~~-~~~-----~-~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 114 (377)
T PRK11102 44 LFYGPMADSFGRKPVILGGTLVFALAAV-AC-ALA-----Q-T-IDQLIYMRFLHGLAAAAASVVINALMRDMFPKEEFS 114 (377)
T ss_pred HhhchHHhhcCChHHHHHHHHHHHHHHH-HH-HHH-----c-c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHH
Confidence 4445667778888776654333222221 11 111 1 1 222223333333444444456778999999999999
Q ss_pred HHHHHHHHHHhhhcccccceee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
+.+++.+....+|..++|.+..
T Consensus 115 ~~~~~~~~~~~~g~~~~~~~~~ 136 (377)
T PRK11102 115 RMMSFVTLVMTIAPLLAPIIGG 136 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888888886553
No 38
>PRK11551 putative 3-hydroxyphenylpropionic transporter MhpT; Provisional
Probab=97.38 E-value=0.00055 Score=60.09 Aligned_cols=93 Identities=11% Similarity=0.032 Sum_probs=55.5
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.++...+.||.|||+.+..+.....+... +. .+ ..+ .+..++..++..+..+........+.+|.+|.+.|
T Consensus 67 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~-~~------~~~-~~~~~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r 137 (406)
T PRK11551 67 ALLGGRLADRIGRKRILIVSVALFGLFSL-AT-AQ------AWD-FPSLLVARLLTGVGLGGALPNLIALTSEAVGPRLR 137 (406)
T ss_pred HHHHHHHHHHhCCchhHHHHHHHHHHHHH-HH-HH------hcc-HHHHHHHHHHHHhhHHHHHHHHHHHHHHHcCHHHH
Confidence 34455666777777766553322222111 11 11 111 22223333333344444555677899999999999
Q ss_pred HHHHHHHHHHHhhhccccccee
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
++++++.+....+|+.++|.+.
T Consensus 138 ~~~~~~~~~~~~~g~~~~~~~~ 159 (406)
T PRK11551 138 GTAVSLMYCGVPFGGALASVIG 159 (406)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998888888888887654
No 39
>TIGR00891 2A0112 putative sialic acid transporter.
Probab=97.37 E-value=0.00055 Score=59.47 Aligned_cols=50 Identities=22% Similarity=0.290 Sum_probs=37.7
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++..++.+..+.....+.+|.+|.+.|++..++......+|..++|.+..
T Consensus 108 ~l~G~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~ 157 (405)
T TIGR00891 108 LVIGIGMGGEYGSSAAYVIESWPKHLRNKASGLLISGYAVGAVVAAQVYS 157 (405)
T ss_pred HHHHhhhhhhhHHHHHHHHHhCChhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444555567788999999999999999988888888877776554
No 40
>PRK10642 proline/glycine betaine transporter; Provisional
Probab=97.36 E-value=0.00053 Score=62.33 Aligned_cols=93 Identities=12% Similarity=0.032 Sum_probs=51.7
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchh---H---HHHHHHHHHHHHHHHhhhhHhhhcccc
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHV---V---FRQTLFLIGITGITSAYTVLYVNTVDM 76 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~---~~~~~~~~~~~~~~~~~~~~~~~~~El 76 (224)
.++...+.||.|||+.+..++....+... +. .+. ++-.. + ..++.=++..++.++.+.....+.+|.
T Consensus 74 ~~~~G~l~Dr~Grr~~l~~~~~l~~i~~~-~~-a~~-----~~~~~~g~~a~~~l~~~R~l~G~g~g~~~~~~~~~~~e~ 146 (490)
T PRK10642 74 GLFFGMLGDKYGRQKILAITIVIMSISTF-CI-GLI-----PSYATIGIWAPILLLLCKMAQGFSVGGEYTGASIFVAEY 146 (490)
T ss_pred HHHHHHHHHhcccHHHHHHHHHHHHHHHH-HH-Hhc-----ccHHHHHHHHHHHHHHHHHHHHhHhHhhHHHHHHHHHHh
Confidence 44555667888888776654333222211 11 111 21111 0 112222233344455566778999999
Q ss_pred cchHHHHHHHHHHHHHHhhhcccccc
Q psy14099 77 FPTPLRQSLLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 77 fPt~vR~~g~g~~~~~~~~~~~~~~~ 102 (224)
+|.+.|++..++......+|..+++.
T Consensus 147 ~p~~~Rg~~~~~~~~~~~~G~~lg~~ 172 (490)
T PRK10642 147 SPDRKRGFMGSWLDFGSIAGFVLGAG 172 (490)
T ss_pred CCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 99999999988876665555555553
No 41
>PRK12307 putative sialic acid transporter; Provisional
Probab=97.34 E-value=0.00062 Score=60.17 Aligned_cols=92 Identities=18% Similarity=0.170 Sum_probs=53.9
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
++...+.||.|||+.+..+.....+... ... + .+ ..+...+.-++..++.+..+.....+.+|.+|.+.|+
T Consensus 71 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~-~~~-~------~~-~~~~l~~~r~l~G~g~g~~~~~~~~~~~~~~~~~~r~ 141 (426)
T PRK12307 71 ALFGLLADKFGRKPLMMWSIVAYSVGTG-LSG-L------AS-GVIMLTLSRFIVGMGMAGEYACASTYAVESWPKHLKS 141 (426)
T ss_pred HHHHHHHHHhCChHHHHHHHHHHHHHHH-HHH-H------Hh-HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCHhHhh
Confidence 3445566777888776653333222211 111 1 11 1222223323333444445566788899999999999
Q ss_pred HHHHHHHHHHhhhccccccee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~ 104 (224)
++.++......+|..++|.+.
T Consensus 142 ~~~~~~~~~~~lg~~~~~~l~ 162 (426)
T PRK12307 142 KASAFLVSGFGIGNIIAAYFM 162 (426)
T ss_pred HhhhHHHHHHhHHHHHHHHHH
Confidence 999998877777777776544
No 42
>TIGR00900 2A0121 H+ Antiporter protein.
Probab=97.32 E-value=0.0011 Score=56.49 Aligned_cols=94 Identities=11% Similarity=-0.041 Sum_probs=58.4
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+....+.||.+||+++..+.......+. .. ... +. ..+...+..++..++.+........+..|..|.+.|+
T Consensus 265 ~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~-~~~-----~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 336 (365)
T TIGR00900 265 LLLGLLGRYFKRMALMTGAIFVIGLAIL-VV-GLT-----PP-NFPLFLVLWFAIGVGYGPINVPQGTLLQRRVPAELLG 336 (365)
T ss_pred HHHHHHHHHhchhHHHHHHHHHHHHHHH-HH-Hhh-----ch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHH
Confidence 4455677888888776553322222221 11 111 11 1222333333444445555566788999999999999
Q ss_pred HHHHHHHHHHhhhcccccceee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++.|+.+....+++.++|.+..
T Consensus 337 ~~~~~~~~~~~~~~~~g~~~~g 358 (365)
T TIGR00900 337 RVFGAQFSLSHAAWPLGLILAG 358 (365)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999988887654
No 43
>PRK03699 putative transporter; Provisional
Probab=97.29 E-value=0.00076 Score=59.33 Aligned_cols=93 Identities=10% Similarity=0.073 Sum_probs=53.8
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.+++..+.||.|||+.+..+......... +. .+ .+ ..+...+..++..++.+........+.+|.+|.+.|
T Consensus 59 ~~~~g~l~dr~g~r~~~~~~~~~~~i~~~-l~-~~------~~-~~~~~~~~~~l~G~~~g~~~~~~~~~i~~~~~~~~r 129 (394)
T PRK03699 59 IFLNAWLMEIIPLKRQLIFGFALMILAVA-GL-MF------SH-SLALFSIAMFVLGVVSGITMSIGTFLITHVYEGKQR 129 (394)
T ss_pred HHHHHHHHHHhhHHHHHHHHHHHHHHHHH-HH-HH------cc-hHHHHHHHHHHHHHhhHhhccchhHHhhhhcccchH
Confidence 34556667888888776654332222111 11 11 11 122222333333333444445567888999999999
Q ss_pred HHHHHHHHHHHhhhccccccee
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
++++++.+....+++.++|.+.
T Consensus 130 ~~~~~~~~~~~~~g~~~~~~~~ 151 (394)
T PRK03699 130 GSRLLFTDSFFSMAGMIFPIIA 151 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999887777777777777654
No 44
>PRK11663 regulatory protein UhpC; Provisional
Probab=97.28 E-value=0.00063 Score=60.75 Aligned_cols=94 Identities=12% Similarity=0.064 Sum_probs=55.9
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.+....+.||.|||+.+..+.....+... +. .+ .+ ..+...+..++..++.+..+.....+.+|.||.+.|
T Consensus 75 ~~~~G~l~dr~g~r~~~~~~~~~~~~~~~-~~-~~------~~-~~~~l~~~~~l~g~~~g~~~~~~~~~~~~~~~~~~r 145 (434)
T PRK11663 75 KFVSGIVSDRSNARYFMGIGLIATGIINI-LF-GF------SS-SLWAFALLWVLNAFFQGWGWPVCAKLLTAWYSRTER 145 (434)
T ss_pred HhhhhHHHhhcCCchhHHHHHHHHHHHHH-HH-HH------Hh-HHHHHHHHHHHHHHHHHccchHHHHHHHHhCCHHHH
Confidence 34555667777777766553333222221 11 11 11 122222222233334444556677899999999999
Q ss_pred HHHHHHHHHHHhhhcccccceee
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++++|+.+....+|+.++|.+..
T Consensus 146 g~~~~~~~~~~~~g~~~~~~~~~ 168 (434)
T PRK11663 146 GGWWAIWNTAHNVGGALIPLVVG 168 (434)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998888888888876554
No 45
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=97.28 E-value=0.00068 Score=58.64 Aligned_cols=92 Identities=11% Similarity=0.060 Sum_probs=54.5
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHH
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQS 84 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 84 (224)
+...+.||.|||+.+..+............ . .++ .+...+..++..+..+........+..|.+|.+.|++
T Consensus 59 ~~g~l~d~~g~r~~~~~~~~~~~~~~~~~~--~------~~~-~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (385)
T TIGR00710 59 LWGPLSDRYGRRPVLLLGLFIFALSSLGLA--L------SNN-IETLLVLRFVQAFGASAGSVISQALVRDIYPGEELSR 129 (385)
T ss_pred hhhhHHHhcCChHHHHHHHHHHHHHHHHHH--H------Hcc-HHHHHHHHHHHHcchhHHHHHHHHHHHHhcCcHHHHH
Confidence 344556777777766553322222221111 1 111 2222233333334444455567789999999999999
Q ss_pred HHHHHHHHHhhhcccccceee
Q psy14099 85 LLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 85 g~g~~~~~~~~~~~~~~~~~~ 105 (224)
..|+.+....++..++|.+..
T Consensus 130 ~~~~~~~~~~~g~~~g~~~~~ 150 (385)
T TIGR00710 130 IYSILMPVLALAPAVAPLLGG 150 (385)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999998888888887776554
No 46
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=97.28 E-value=0.00038 Score=60.03 Aligned_cols=52 Identities=15% Similarity=-0.040 Sum_probs=37.7
Q ss_pred HHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHH-hhhcccccceeeh
Q psy14099 55 FLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIG-RIGQVIAPQVFLL 106 (224)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~-~~~~~~~~~~~~~ 106 (224)
.++..++....+.....+.+|++|.+.|+++.++.+..+ .+|+.++|.+...
T Consensus 319 ~~~~g~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~g~~~~p~~~g~ 371 (394)
T TIGR00883 319 VLGLALIGGMYTGPMGSFLPELFPTEVRYTGASLAYNLAGAIFGGFAPYIAAA 371 (394)
T ss_pred HHHHHHHHHHHhhhHHHHHHHhCCccceeeEeeehhHhHHHHHhhHHHHHHHH
Confidence 334444455566678899999999999999999865544 5677788876643
No 47
>PRK10077 xylE D-xylose transporter XylE; Provisional
Probab=97.27 E-value=0.0011 Score=59.47 Aligned_cols=44 Identities=18% Similarity=0.229 Sum_probs=33.5
Q ss_pred HHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccc
Q psy14099 59 ITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 59 ~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~ 102 (224)
.+..+..+.....+.+|.+|.+.|++.+++......+|..+++.
T Consensus 131 G~~~g~~~~~~~~~i~e~~~~~~rg~~~~~~~~~~~~G~~~~~~ 174 (479)
T PRK10077 131 GIGVGLASMLSPMYIAEIAPAHIRGKLVSFNQFAIIFGQLVVYF 174 (479)
T ss_pred hhhHhHHhhHHHHHHHhhCChhhhhHHHHHHHHHHHHHHHHHHH
Confidence 34445555667889999999999999999987776777666554
No 48
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.26 E-value=0.0011 Score=59.71 Aligned_cols=93 Identities=18% Similarity=0.091 Sum_probs=55.9
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
++...+.||.|||++++.+.....+...... + .. ..+...+..++..++.+..+.....+..|.+|.+.|+
T Consensus 73 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~~~~--~------~~-~~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~r~ 143 (496)
T PRK03893 73 LLLGAMGDRYGRRLAMVISIVLFSVGTLACG--F------AP-GYWTLFIARLVIGMGMAGEYGSSATYVIESWPKHLRN 143 (496)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHHHHH--H------Hh-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCHHHHH
Confidence 4455666777777766553322222111111 1 11 1222233333333444555566778899999999999
Q ss_pred HHHHHHHHHHhhhcccccceee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++.++......+|+.++|.+..
T Consensus 144 ~~~~~~~~~~~~g~~~~~~~~~ 165 (496)
T PRK03893 144 KASGFLISGFSIGAVVAAQVYS 165 (496)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888888888886554
No 49
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.23 E-value=0.00035 Score=59.05 Aligned_cols=93 Identities=14% Similarity=0.105 Sum_probs=56.0
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+....+.||.|||+.+..+............ + .+ ..+...+..++..++.+........+.+|.+|.+.|+
T Consensus 52 ~~~g~~~d~~g~r~~~~~~~~~~~~~~~~~~--~------~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 122 (352)
T cd06174 52 LLAGYLSDRFGRRRVLLLGLLLFALGSLLLA--F------AS-SLWLLLVGRFLLGLGGGALYPAAAALIAEWFPPKERG 122 (352)
T ss_pred HhHHHHHHHhCCchhhHHHHHHHHHHHHHHH--H------hc-cHHHHHHHHHHHHcccccccHhHHHHHHHhCCccchh
Confidence 3444556777777765553332222222111 1 11 1222333333333444445566789999999999999
Q ss_pred HHHHHHHHHHhhhcccccceee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++.++......+|..++|.+..
T Consensus 123 ~~~~~~~~~~~~g~~~~~~~~~ 144 (352)
T cd06174 123 RALGLFSAGFGLGALLGPLLGG 144 (352)
T ss_pred hhhhHHHHHHHHHHHHHHHHHH
Confidence 9999999888888888887654
No 50
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=97.22 E-value=0.0011 Score=59.73 Aligned_cols=39 Identities=13% Similarity=0.111 Sum_probs=32.0
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHHhh-hcccccceeeh
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIGRI-GQVIAPQVFLL 106 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~~~-~~~~~~~~~~~ 106 (224)
..+.+..|.+|.+.|+++.|+.+..+.+ |+.++|.+...
T Consensus 369 ~~~~~~~~~~p~~~~g~a~gi~~~~g~l~g~~~~~~~~G~ 408 (467)
T PRK09556 369 LIGVAAVGFVPKKAIGVANGIKGTFAYLFGDSFAKVGLGM 408 (467)
T ss_pred HHHHHHHhhcchhhHHHHHHHHHHHHHHHhHHHHhhhHHH
Confidence 3456777999999999999999999997 66788876654
No 51
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=97.21 E-value=0.0014 Score=55.75 Aligned_cols=94 Identities=13% Similarity=0.065 Sum_probs=58.7
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+....+.||.|||+.++.+.....+...+.. +. + + .+..++..++..++.+........+.+|.+|.+.|+
T Consensus 50 ~~~g~l~dr~g~r~~l~~~~~~~~~~~~~~~--~~-----~-~-~~~~~~~~~l~g~~~~~~~~~~~~~i~~~~~~~~~~ 120 (352)
T PF07690_consen 50 PFAGYLSDRFGRRRVLIIGLLLFALGSLLLA--FA-----S-N-FWLLLIARFLLGIGSGFFSPASNALIADWFPPEERG 120 (352)
T ss_dssp HHHHHHHHHS-HHHHHHHHHHHHHHHHHHHH--HH-----C-C-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTCCHH
T ss_pred HHHHHHHHHcCCeeeEeehhhhhhhHHHHhh--hh-----h-h-HHHHhhhccccccccccccccccccccccchhhhhh
Confidence 4455566777777766554433333211111 11 1 1 223334444444555556667889999999999999
Q ss_pred HHHHHHHHHHhhhcccccceeeh
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+.+++......+|..++|.+...
T Consensus 121 ~~~~~~~~~~~~g~~~g~~l~~~ 143 (352)
T PF07690_consen 121 RAFGILSAGFSLGSILGPLLGGF 143 (352)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccccccchhhhhhhcccchhhh
Confidence 99999998888888888876654
No 52
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=97.21 E-value=0.0013 Score=58.49 Aligned_cols=94 Identities=18% Similarity=0.058 Sum_probs=53.3
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.+....+.||.|||+.++.+.....+... .. .+ .++.. ..++.-++..++.+......+++..|.||.+.|
T Consensus 68 ~~~~G~l~dr~Grr~~l~~~~~~~~~~~~-~~-~~------a~~~~-~l~~~r~l~Gi~~~~~~~~~~~~~~~~~~~~~~ 138 (413)
T PRK15403 68 QWLLGPLSDRIGRRPVLITGALIFTLACA-AT-LF------TTSMT-QFLIARFIQGTSICFIATVGYVTVQEAFGQTKG 138 (413)
T ss_pred HHhhhHHHHHcCchHHHHHHHHHHHHHHH-HH-HH------cCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 34456677888888876654332222111 11 11 11111 222222222222222234467889999999999
Q ss_pred HHHHHHHHHHHhhhcccccceee
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++.+++......++..++|.+..
T Consensus 139 ~~~~~~~~~~~~~~~~~g~~lg~ 161 (413)
T PRK15403 139 IKLMAIITSIVLVAPIIGPLSGA 161 (413)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999888888888877776553
No 53
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=97.20 E-value=0.0017 Score=57.89 Aligned_cols=96 Identities=8% Similarity=-0.004 Sum_probs=54.3
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCc-hhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLH-HVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
....+.||.|||+++..+.....+.+.+.. .. . ... ..+...+..++..+...........+.+|.+|++.|+
T Consensus 270 ~~g~l~dr~g~r~~l~~~~~~~~v~~~l~~--~~---~-~~~~~~~~l~l~~~l~g~~~~~~~~~~~~~i~~~~p~~~~g 343 (418)
T TIGR00889 270 TIPFFLKRFGIKKVMLLSLVAWALRFGFFA--YG---D-PEYFGYALLFLSMIVYGCAFDFFNISGSVFVEKEVPVHIRA 343 (418)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHHHHH--Hc---C-cchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHH
Confidence 344566777888776654433332222111 10 0 111 1111222223333333344445678899999999999
Q ss_pred HHHHHHH-HHHhhhcccccceeeh
Q psy14099 84 SLLAFCS-MIGRIGQVIAPQVFLL 106 (224)
Q Consensus 84 ~g~g~~~-~~~~~~~~~~~~~~~~ 106 (224)
++.|+.+ ....+|+.++|.+...
T Consensus 344 ~~~g~~~~~~~~lg~~iGp~l~G~ 367 (418)
T TIGR00889 344 SAQGLFTLMCNGFGSLLGYILSGV 367 (418)
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHH
Confidence 9999997 5567888888877654
No 54
>cd06174 MFS The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that includes uniporters, symporters, and antiporters. MFS proteins facilitate the transport across cytoplasmic or internal membranes of a variety of substrates including ions, sugar phosphates, drugs, neurotransmitters, nucleosides, amino acids, and peptides. They do so using the electrochemical potential of the transported substrates. Uniporters transport a single substrate, while symporters and antiporters transport two substrates in the same or in opposite directions, respectively, across membranes. MFS proteins are typically 400 to 600 amino acids in length, and the majority contain 12 transmembrane alpha helices (TMs) connected by hydrophilic loops. The N- and C-terminal halves of these proteins display weak similarity and may be the result of a gene duplication/fusion event. Based on kinetic studies and the structures of a few bacterial superfamily members, GlpT (glycerol-3
Probab=97.19 E-value=0.0012 Score=55.79 Aligned_cols=94 Identities=18% Similarity=0.259 Sum_probs=59.9
Q ss_pred hhHHHHhcccchHH-HHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 4 IVCIWMDHVVFRQT-LFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 4 l~~~~~~~~~gRr~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
++...+.||.|||+ .+..+......... ... .. .+ .+...+..++..++.+..+.....+..|.+|.+.|
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~-~~-----~~--~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 299 (352)
T cd06174 229 LLGGLLSDRLGRRRLLLLIGLLLAALGLL-LLA-LA-----PS--LALLLVALLLLGFGLGFAFPALLTLASELAPPEAR 299 (352)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHH-HHH-Hh-----cc--HHHHHHHHHHHHHHHhccchhHHHHHHhhcCHHHH
Confidence 34445567888777 55443332222222 111 11 11 22333344444455566667788999999999999
Q ss_pred HHHHHHHHHHHhhhcccccceeeh
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++..|+.+....+++.++|.+...
T Consensus 300 ~~~~~~~~~~~~~~~~i~~~i~g~ 323 (352)
T cd06174 300 GTASGLFNTFGSLGGALGPLLAGL 323 (352)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999887654
No 55
>PRK10054 putative transporter; Provisional
Probab=97.16 E-value=0.0014 Score=57.83 Aligned_cols=42 Identities=19% Similarity=0.203 Sum_probs=34.3
Q ss_pred hhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 65 AYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 65 ~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.......+.+|.+|.+.|+++.|+.+....+|..++|.+...
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~lg~~igp~l~~~ 154 (395)
T PRK10054 113 FSTVLKAWFADNLSSTSKTKIFSLNYTMLNIGWTVGPPLGTL 154 (395)
T ss_pred HHHHHHHHHHHhcCHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344567888999999999999999988888888888776543
No 56
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=97.14 E-value=0.0017 Score=57.26 Aligned_cols=93 Identities=11% Similarity=-0.079 Sum_probs=54.8
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHH
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQS 84 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 84 (224)
+...+.||.|||+.++.+.....+... .. .+ .+ ..+...+.-++..++.+........+.+|.+|.+.|++
T Consensus 74 ~~g~l~Dr~grr~~~~~~~~~~~~~~~-~~-~~------~~-~~~~l~~~r~l~G~~~g~~~~~~~~~i~~~~~~~~~~~ 144 (394)
T PRK10213 74 FITQTIQATDRRYVVILFAVLLTLSCL-LV-SF------AN-SFSLLLIGRACLGLALGGFWAMSASLTMRLVPPRTVPK 144 (394)
T ss_pred HHHHHhcccCcHHHHHHHHHHHHHHHH-HH-HH------HC-hHHHHHHHHHHHHHhhHHHHHHHHHHHHHHcCHhHHHH
Confidence 334566788888776653332222221 11 11 11 12223333333334444455567788899999999999
Q ss_pred HHHHHHHHHhhhcccccceeeh
Q psy14099 85 LLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 85 g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+.++......++..++|.+...
T Consensus 145 a~~~~~~~~~~g~~ig~~l~~~ 166 (394)
T PRK10213 145 ALSVIFGAVSIALVIAAPLGSF 166 (394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999888777777777765543
No 57
>PRK03545 putative arabinose transporter; Provisional
Probab=97.11 E-value=0.0023 Score=56.09 Aligned_cols=94 Identities=7% Similarity=-0.034 Sum_probs=54.6
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+....+.||.|||+.+..+......... .. .+. + . .+...+.-++..+..+..+.....+.+|.+|.+.|+
T Consensus 62 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~-~~~-----~-~-~~~l~~~r~~~G~~~~~~~~~~~~~i~~~~~~~~r~ 132 (390)
T PRK03545 62 LPLMLLTSNVERRKLLIGLFVLFIASHV-LS-ALA-----W-N-FTVLLISRIGIAFAHAIFWSITASLAIRVAPAGKKA 132 (390)
T ss_pred HHHHHHHcCCChHHHHHHHHHHHHHHHH-HH-HHh-----c-c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhhhh
Confidence 3445667888888876664332222211 11 111 1 1 222222222222222333445668889999999999
Q ss_pred HHHHHHHHHHhhhcccccceeeh
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+++|+......+|..++|.+...
T Consensus 133 ~~~g~~~~~~~~g~~ig~~l~~~ 155 (390)
T PRK03545 133 QALSLLATGTALAMVLGLPLGRV 155 (390)
T ss_pred hHHHHHHHHHHHHHHHHhhHHHH
Confidence 99999888888888888876543
No 58
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=97.09 E-value=0.0018 Score=58.12 Aligned_cols=92 Identities=8% Similarity=0.026 Sum_probs=49.1
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.+....+.||.|||+.++.+.....+... ... +. +.........++..++..++.+..+.......+|.||.+.|
T Consensus 80 ~~~~G~l~Dr~g~k~~l~~~~~~~~i~~~-~~~-~~---~~~~~~~~~~~~~~~l~gi~~g~~~~~~~~~~~~~~~~~~r 154 (452)
T PRK11273 80 KFIMGSVSDRSNPRVFLPAGLILAAAVML-FMG-FV---PWATSSIAVMFVLLFLCGWFQGMGWPPCGRTMVHWWSQKER 154 (452)
T ss_pred HhhhhhhhhccCCchhHHHHHHHHHHHHH-HHH-hh---hcccccHHHHHHHHHHHHHHHhccchHHHHHHHHhCChHHH
Confidence 34555667888888776554332222111 111 11 10111122222222333334444444455677899999999
Q ss_pred HHHHHHHHHHHhhhccc
Q psy14099 83 QSLLAFCSMIGRIGQVI 99 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~ 99 (224)
++++|+.+....+|+.+
T Consensus 155 ~~~~~~~~~~~~~g~~~ 171 (452)
T PRK11273 155 GGIVSVWNCAHNVGGGL 171 (452)
T ss_pred HHHHHHHHHHHHhhhhH
Confidence 99999977777776543
No 59
>PRK10504 putative transporter; Provisional
Probab=97.08 E-value=0.0027 Score=57.04 Aligned_cols=93 Identities=13% Similarity=0.138 Sum_probs=54.9
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
++...+.||.|||+.++.+......... .. .+ ... .+..++..++..++.+........+..|.+|.+.|+
T Consensus 63 ~~~g~l~d~~g~r~~~~~~~~~~~~~~~-~~-~~------~~~-~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~ 133 (471)
T PRK10504 63 PASGWLADRVGVRNIFFTAIVLFTLGSL-FC-AL------SGT-LNELLLARVLQGVGGAMMVPVGRLTVMKIVPREQYM 133 (471)
T ss_pred HHHHHHHHHhchHHHHHHHHHHHHHHHH-HH-HH------hCC-HHHHHHHHHHHHhhhHHHHHHHHHHHHHHcCHHHHH
Confidence 3445566777777765553322222111 11 11 111 222233333333444444556778889999999999
Q ss_pred HHHHHHHHHHhhhcccccceee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++.|+......+|..++|.+..
T Consensus 134 ~~~~~~~~~~~~g~~~g~~~~g 155 (471)
T PRK10504 134 AAMTFVTLPGQVGPLLGPALGG 155 (471)
T ss_pred HHHHHHHHHHHHHHHhhhHHHH
Confidence 9999988888888888887654
No 60
>PRK09952 shikimate transporter; Provisional
Probab=97.05 E-value=0.0015 Score=58.44 Aligned_cols=41 Identities=7% Similarity=0.034 Sum_probs=29.7
Q ss_pred HHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccc
Q psy14099 62 ITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 62 ~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~ 102 (224)
.++.+.....+.+|.+|.+.|++..+.......+|..+++.
T Consensus 139 ~g~~~~~~~~~~~e~~p~~~rg~~~~~~~~g~~~G~~l~~~ 179 (438)
T PRK09952 139 VGGEWGGAALLAVESAPKNKKAFYSSGVQVGYGVGLLLSTG 179 (438)
T ss_pred hcccHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 33444556789999999999998887776666666665543
No 61
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=97.05 E-value=0.0014 Score=59.43 Aligned_cols=37 Identities=11% Similarity=0.096 Sum_probs=28.5
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
....+.+|.||.+.|++++|+.+..+.+|+.+++.+.
T Consensus 143 ~~~~~i~~~~~~~~rg~a~g~~~~~~~~g~~~~~~~~ 179 (476)
T PLN00028 143 SCQYWMSTMFNGKIVGTANGIAAGWGNLGGGVTQLLM 179 (476)
T ss_pred HHHHHHHHhcChhheeHHHHHHHHHHHHHHHHHHHHH
Confidence 3445789999999999999998877766666665544
No 62
>PRK03893 putative sialic acid transporter; Provisional
Probab=97.04 E-value=0.00091 Score=60.38 Aligned_cols=41 Identities=27% Similarity=0.276 Sum_probs=34.8
Q ss_pred hhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 66 YTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 66 ~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
......+..|.+|.+.|++++|+.+..+.+|+.++|.+...
T Consensus 384 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~lgp~l~g~ 424 (496)
T PRK03893 384 SGLLPKLIGGYFDTEQRAAGLGFTYNVGALGGALAPILGAL 424 (496)
T ss_pred chhhHHHHHhhCCHHHhhcccchhhhhhhHHHHHHHHHHHH
Confidence 34567788999999999999999999999999898876643
No 63
>PRK10406 alpha-ketoglutarate transporter; Provisional
Probab=97.01 E-value=0.0019 Score=57.67 Aligned_cols=42 Identities=12% Similarity=0.021 Sum_probs=28.8
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccc
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAP 101 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~ 101 (224)
+..++.+.....+.+|.+|.+.|++..++.......|..+++
T Consensus 136 ~g~g~~~~~~~~~i~e~~p~~~rg~~~~~~~~~~~~G~~~~~ 177 (432)
T PRK10406 136 LSVGGEYGTSATYMSEVAVEGRKGFYASFQYVTLIGGQLLAL 177 (432)
T ss_pred hhhhhhHhhHHHHHHHhCCCCcccHHHHHHHHHHHHHHHHHH
Confidence 334445566789999999999999988875544444444444
No 64
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=97.00 E-value=0.0033 Score=53.84 Aligned_cols=44 Identities=11% Similarity=0.172 Sum_probs=36.7
Q ss_pred HHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 63 TSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 63 ~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.+.....+.+..|.+|.+.|+++.|+.+....+|+.++|.+...
T Consensus 325 ~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g~ 368 (379)
T TIGR00881 325 YGPQMLIGVIASELAPKKAAGTAAGFVGFFAYLGGILAGLPLGY 368 (379)
T ss_pred hhhhHHHHHHHHHhcCcchhHHHHHHHHHhhhhhhhhhhhhHHH
Confidence 33444567789999999999999999999999999999987654
No 65
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=96.99 E-value=0.0033 Score=55.60 Aligned_cols=92 Identities=9% Similarity=-0.013 Sum_probs=53.2
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHH
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQS 84 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 84 (224)
++..+.||.|||+.+..+......... .. .. .++ .+...+..++..+..+........+..|.+|.+.|++
T Consensus 65 ~~G~l~dr~g~k~~l~~~~~~~~~~~~-~~-~~------~~~-~~~l~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (400)
T PRK11646 65 FGGAIADRFGAKPMIVTGMLMRAAGFA-TM-AI------AHE-PWLLWLSCILSGLGGTLFDPPRTALVIKLIRPHQRGR 135 (400)
T ss_pred hhhHHHHHhCchHHHHHHHHHHHHHHH-HH-HH------hcc-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHHHH
Confidence 445566777777776654333332222 11 11 111 2222222233233333333456778899999999999
Q ss_pred HHHHHHHHHhhhcccccceee
Q psy14099 85 LLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 85 g~g~~~~~~~~~~~~~~~~~~ 105 (224)
+.|+......+|..++|.+..
T Consensus 136 a~~~~~~~~~~g~~ig~~l~g 156 (400)
T PRK11646 136 FFSLLMMQDSAGAVIGALLGS 156 (400)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999988888887777776554
No 66
>TIGR00881 2A0104 phosphoglycerate transporter family protein.
Probab=96.99 E-value=0.00034 Score=59.97 Aligned_cols=90 Identities=10% Similarity=0.074 Sum_probs=53.6
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.++...+.||.|||+.++.+.....+... +.. +. + ..+...+..++..++.+........+.+|.+|.+.|
T Consensus 47 ~~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~~-~~-----~--~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~r 117 (379)
T TIGR00881 47 KFVMGSVSDRSNPRVFLPIGLILCAIVNL-FFG-FS-----T--SLWVMAALWALNGIFQGMGWPPCGRTVTKWFSRSER 117 (379)
T ss_pred hhhhhHHHHhhCCeehhHHHHHHHHHHHH-HHH-Hh-----h--hHHHHHHHHHHHHhhccccCCchHHHHHHhcCHhhh
Confidence 34455667777777776554332222221 111 11 1 122223333333333344455678899999999999
Q ss_pred HHHHHHHHHHHhhhccccc
Q psy14099 83 QSLLAFCSMIGRIGQVIAP 101 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~ 101 (224)
+++.++......+|+.++|
T Consensus 118 ~~~~~~~~~~~~~g~~~~~ 136 (379)
T TIGR00881 118 GTWVSFWNCSHNVGGGLLP 136 (379)
T ss_pred eeeEeehhccchhHHHHHH
Confidence 9999998888888888877
No 67
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=96.99 E-value=0.0025 Score=56.13 Aligned_cols=41 Identities=15% Similarity=0.152 Sum_probs=31.8
Q ss_pred hhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 65 AYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 65 ~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
.....+.+..|.||.+.|.++.++......++..++|.+..
T Consensus 118 ~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~ 158 (406)
T PRK15402 118 IGAVGYAAIQESFEEADAIKITALMANVALLAPLLGPLVGA 158 (406)
T ss_pred HHHHHHHHHHHHhChhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33456788899999999999999887777777777776543
No 68
>TIGR00901 2A0125 AmpG-related permease.
Probab=96.96 E-value=0.0046 Score=53.32 Aligned_cols=40 Identities=10% Similarity=0.027 Sum_probs=32.7
Q ss_pred hhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 67 TVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.....+.+|++|.+.|+.+.|+......+|..++|.+...
T Consensus 102 ~~~~a~~~~~~~~~~r~~~~~~~~~~~~~G~~~~~~l~~~ 141 (356)
T TIGR00901 102 IALDAWRLEILSDEELGYGSTIYIVGYRAGMLLSGSLALV 141 (356)
T ss_pred HHHHHHHHHhCCHhhhchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999999888788888877776543
No 69
>TIGR00901 2A0125 AmpG-related permease.
Probab=96.96 E-value=0.0045 Score=53.34 Aligned_cols=40 Identities=5% Similarity=-0.042 Sum_probs=30.9
Q ss_pred HHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHH
Q psy14099 54 LFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIG 93 (224)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~ 93 (224)
..++..+.....+.....+..|++|++.|++.+|+.+...
T Consensus 315 ~~~l~~~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~ 354 (356)
T TIGR00901 315 TITLEAVTGGLGTVAFVAFLSKLSNPKFGATQMALLSSLS 354 (356)
T ss_pred HHHHHHHHhHHHHHHHHHHHHHhcCCCccHHHHHHHHHHH
Confidence 3344445556667778999999999999999999977654
No 70
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=96.93 E-value=0.0016 Score=64.84 Aligned_cols=96 Identities=3% Similarity=-0.086 Sum_probs=56.3
Q ss_pred hhHHHHhcccchHHHHHHHHH-HHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGIT-GITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
+++..+.||+|||++++.+.. .++..+...+... ... .+..+++.++..++.+......+.+.+|++|.+.|
T Consensus 65 ~~~G~l~Dr~grk~~l~~~~~~~~~~~~~~~~~~~------~~~-~~~l~~~r~l~G~~~~~~~~~~~~~i~~~~~~~~r 137 (1146)
T PRK08633 65 SPAGFLADKFSKNRVIRIVKLFEVGLTLLIVLAYY------LGW-FWLAFAVTFLLGAQSAIYSPAKYGIIPELVGKENL 137 (1146)
T ss_pred hhHhhhcccccHHHHHHHHHHHHHHHHHHHHHHHH------Hcc-HHHHHHHHHHHHHHHHhhchHHHhhhHHhcCcccc
Confidence 344556778888887665332 1211111011100 111 22222333333344444445678899999999999
Q ss_pred HHHHHHHHHHHhhhcccccceeeh
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++++|+......+|..++|.+...
T Consensus 138 ~~~~~~~~~~~~ig~~lg~~l~~~ 161 (1146)
T PRK08633 138 SRANGLLEAFTIVAILAGTALFSF 161 (1146)
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHH
Confidence 999999988888888888876543
No 71
>PRK11663 regulatory protein UhpC; Provisional
Probab=96.91 E-value=0.0044 Score=55.31 Aligned_cols=39 Identities=5% Similarity=0.114 Sum_probs=34.4
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
....+.+|.+|++.|++++|+.+..+.+|+.++|.+...
T Consensus 357 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~p~~~g~ 395 (434)
T PRK11663 357 LIGMAAAECSHKEAAGAATGFVGLFAYLGAALSGYPLAK 395 (434)
T ss_pred HHHHHHHhcccHhhHHhHHHHHHHHHHHHHHHhcccHHH
Confidence 445678999999999999999999999999999987754
No 72
>TIGR00893 2A0114 d-galactonate transporter.
Probab=96.90 E-value=0.0036 Score=53.61 Aligned_cols=42 Identities=17% Similarity=0.214 Sum_probs=37.3
Q ss_pred hhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 65 AYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 65 ~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.....+.+.+|.+|.+.|+++.|+.+....+|+.++|.+...
T Consensus 328 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~~~~i~g~ 369 (399)
T TIGR00893 328 AGAIGWALISDNAPGNIAGLTGGLINSLGNLGGIVGPIVIGA 369 (399)
T ss_pred hhhHHHHHHHhhcChhHHHHHHHHHHHHHHHhhhhhhHHhhh
Confidence 456788999999999999999999999999999999987654
No 73
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=96.90 E-value=0.0018 Score=58.16 Aligned_cols=47 Identities=17% Similarity=0.029 Sum_probs=37.5
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+..+..+.....+.+|.+|.+.|++.+|+......+|..++|.+...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~i~~~l~~~ 189 (465)
T TIGR00894 143 LAQGSVSPATHKIIVKWAPPKERSRLLGMSTSGFQLGTFIFLPISGW 189 (465)
T ss_pred HhcccchhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444455677899999999999999999998888888888876543
No 74
>TIGR00903 2A0129 major facilitator 4 family protein. This family of proteins are uncharacterized proteins from archaea. This family includes proteins from Archaeoglobus fulgidus and Aeropyrum pernix.
Probab=96.89 E-value=0.0038 Score=54.82 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=31.6
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
......+|.+|.+.|++.+++......+|+.++|.+...
T Consensus 98 ~~~~~~~~~~~~~~r~~a~~~~~~~~~lG~~l~~~~~~~ 136 (368)
T TIGR00903 98 NAFAPAASQIREERRDLVISLLSFAMYLGIIFALAAGLK 136 (368)
T ss_pred HHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345556899999999999999988888888888765543
No 75
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=96.87 E-value=0.0017 Score=57.98 Aligned_cols=45 Identities=13% Similarity=0.107 Sum_probs=33.8
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
++.+..+.....+.+|.||.+.|++++|+.+....+++.++|.+.
T Consensus 130 ~~~g~~~~~~~~~i~~~~~~~~rg~~~~~~~~~~~~g~~~~~~l~ 174 (438)
T TIGR00712 130 WFQGMGWPPCGRTMVHWWSQSERGTIVSIWNCAHNIGGGIPPLLV 174 (438)
T ss_pred HHhhcchHHHHHHHHHhcCcccchhHHHHHHHHHHhHhHHHHHHH
Confidence 333444455667788999999999999998888878877776543
No 76
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=96.85 E-value=0.003 Score=54.38 Aligned_cols=40 Identities=18% Similarity=0.286 Sum_probs=29.5
Q ss_pred hhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 65 AYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 65 ~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
.+.....+.+|.+|.+.|++..++......+|..+++.+.
T Consensus 107 ~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~~~~i~ 146 (366)
T TIGR00886 107 SFASCMPWISFFFPKKIQGTALGLAAGWGNMGGGVAQFVM 146 (366)
T ss_pred hhHhHHHHHHHhcCHhhhhHHHHHHHHHhHHHHHHHHHHH
Confidence 3445677899999999999999988766666655555443
No 77
>PRK10489 enterobactin exporter EntS; Provisional
Probab=96.85 E-value=0.0062 Score=53.84 Aligned_cols=47 Identities=9% Similarity=-0.002 Sum_probs=37.1
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++.+......+.+..|..|.+.|+++.|+.+....+|..++|.+...
T Consensus 324 ~~~~~~~~~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~g~~l~G~ 370 (417)
T PRK10489 324 YLSAISSLLQYTLLQTQTPDEMLGRINGLWTAQNVTGDAIGAALLGG 370 (417)
T ss_pred HHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhhhHhHHHHHHHH
Confidence 33333334566888999999999999999998888888888887754
No 78
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=96.84 E-value=0.0042 Score=53.58 Aligned_cols=47 Identities=19% Similarity=0.145 Sum_probs=35.3
Q ss_pred HHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 59 ITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 59 ~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.++.+........+..|.+|.+. +++.|+.+....+|..++|.+...
T Consensus 299 g~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~g~~~g~~~~g~ 345 (375)
T TIGR00899 299 AIFIGILAGIGMLYFQDLMPGRA-GAATTLYTNTGRVGWIIAGSVGGI 345 (375)
T ss_pred HHHHHHHHHHHHHHHHHhCcchh-hHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34444445566788899999864 599999998888999888876653
No 79
>TIGR00711 efflux_EmrB drug resistance transporter, EmrB/QacA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 14 potential membrane-spanning regions. Members with known activities include EmrB (multiple drug resistance efflux pump) in E. coli, FarB (antibacterial fatty acid resistance) in Neisseria gonorrhoeae, TcmA (tetracenomycin C resistance) in Streptomyces glaucescens, etc. In most cases, the efflux pump is described as having a second component encoded in the same operon, such as EmrA of E. coli.
Probab=96.83 E-value=0.0059 Score=54.75 Aligned_cols=98 Identities=12% Similarity=0.092 Sum_probs=56.8
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+++..+.||.|||+++..+......... +.. + ... +....+......++..++.+..+........|..|.+.|+
T Consensus 309 ~~~g~l~~r~~~~~~~~~g~~~~~~~~~-~~~-~--~~~-~~~~~~~~~~~~~l~g~g~~~~~~~~~~~~~~~~~~~~~g 383 (485)
T TIGR00711 309 PIAGRMGDKIDPRKLVTIGLILYAVGFY-WRA-F--TFT-PDTPFLAIALPQFIRGFGMGCFFMPLTTIALSGLPPHKIA 383 (485)
T ss_pred HHHHHHHhhcCcHHHHHHHHHHHHHHHH-HHh-c--cCC-CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHh
Confidence 4455567888888776554433332222 111 0 011 1111222222233333444444555566667889999999
Q ss_pred HHHHHHHHHHhhhcccccceeeh
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++.|+.+....+|+.+++.+...
T Consensus 384 ~~~~~~~~~~~~g~~ig~~i~g~ 406 (485)
T TIGR00711 384 RGSSLSNFTRQLGGSIGTALITT 406 (485)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999988998888876643
No 80
>PRK15011 sugar efflux transporter B; Provisional
Probab=96.81 E-value=0.0039 Score=54.85 Aligned_cols=43 Identities=16% Similarity=0.145 Sum_probs=32.8
Q ss_pred HHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 63 TSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 63 ~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+...+....+..|.+|.+ |+++.++.+....+|+.++|.+...
T Consensus 320 g~~~~~~~~~~~~~~p~~-~g~~~~~~~~~~~lg~~~g~~l~G~ 362 (393)
T PRK15011 320 GILGGIGMLYFQDLMPGQ-AGSATTLYTNTSRVGWIIAGSLAGI 362 (393)
T ss_pred HHHHHHHHHHHHHhCCCC-cchHHHHHHHHHHHHHHHHHHHHHH
Confidence 333445567789999976 8999999888888888888876644
No 81
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.79 E-value=0.0069 Score=53.05 Aligned_cols=49 Identities=18% Similarity=0.143 Sum_probs=35.2
Q ss_pred HHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 57 IGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
+..++.+..+........|.+|.+.|+++.|+.+....+|..++|.+..
T Consensus 311 l~G~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~~~~~g 359 (399)
T PRK05122 311 LTGFGFSLVFPALGVEAVKRVPPQNRGAALGAYSVFLDLSLGITGPLAG 359 (399)
T ss_pred HHHHhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3334444444445566779999999999999998888888777766543
No 82
>KOG0569|consensus
Probab=96.78 E-value=0.0072 Score=55.07 Aligned_cols=107 Identities=12% Similarity=-0.006 Sum_probs=56.1
Q ss_pred chhhHHHHhcccchHHHHHH-HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLI-GITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTP 80 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 80 (224)
|.+.+..+.|+.|||..+.. .+.+...++..... .. .+ .....+..=++.....+...+....|..|+=|++
T Consensus 76 Gs~~~~~la~~~GRK~~l~~~~~l~~~~~~~~~~s-~~-----~~-~~e~li~GR~i~Gl~~gl~~~~~pmyl~E~sP~~ 148 (485)
T KOG0569|consen 76 GSFSSGLLADRFGRKNALLLSNLLAVLAALLMGLS-KS-----AP-SFEMLILGRLIVGLACGLSTGLVPMYLTEISPKN 148 (485)
T ss_pred HHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHH-HH-----hh-hHHHHHHHHHHHHHHhHHHHHHHHHHHhhcChhh
Confidence 44566777888888866554 33332222221111 00 11 1111222222222233344557889999999999
Q ss_pred HHHHHHHHHHHHHhhhcccccceeehhcccccccc
Q psy14099 81 LRQSLLAFCSMIGRIGQVIAPQVFLLLGFVLGDSR 115 (224)
Q Consensus 81 vR~~g~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 115 (224)
.|+..-.+......+|-.++..+..-...+.++.|
T Consensus 149 ~RG~~g~~~~~~~~~g~ll~~~~~l~~ilGt~~~W 183 (485)
T KOG0569|consen 149 LRGALGTLLQIGVVIGILLGQVLGLPSLLGTEDLW 183 (485)
T ss_pred hccHHHHHHHHHHHHHHHHHHHHccHHhcCCCcch
Confidence 99987777666666666655433322222445554
No 83
>PRK12382 putative transporter; Provisional
Probab=96.77 E-value=0.0043 Score=54.30 Aligned_cols=47 Identities=17% Similarity=0.215 Sum_probs=36.7
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+..+..+........|.+|.+.|+++.|+.+....+|+.++|.+...
T Consensus 314 ~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~ig~~~~g~ 360 (392)
T PRK12382 314 AGCSLIFPALGVEVVKRVPSQVRGTALGGYAAFQDIAYGVSGPLAGM 360 (392)
T ss_pred HHHHhHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344444566778899999999999999999999998888876653
No 84
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=96.77 E-value=0.0055 Score=54.57 Aligned_cols=98 Identities=13% Similarity=0.054 Sum_probs=58.7
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.+.+..+.||.|||+.++.++........ ++. .. . .....+...+..++..+..+........+..|+.|.+.|
T Consensus 55 ~~~~g~l~~r~G~r~~~~~g~~l~~~g~~-l~~-~~---~-~~~~~~~~l~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~ 128 (410)
T TIGR00885 55 AIPAAIFMKKLSYKAGILLGLFLYALGAF-LFW-PA---A-EIMNYTLFLVGLFILTAGLGFLETAANPYILVMGPESTA 128 (410)
T ss_pred HHHHHHHHHHhCchHHHHHHHHHHHHHHH-HHH-HH---H-hhccHHHHHHHHHHHHhhHHHHHhhhhHHHHHHCCHhHH
Confidence 34556777888888877664443332222 111 00 0 011122223333333444455555666788899999999
Q ss_pred HHHHHHHHHHHhhhcccccceeeh
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++.+++.+....+|+.++|.+...
T Consensus 129 ~~~~~~~~~~~~lG~~~g~~i~~~ 152 (410)
T TIGR00885 129 TRRLNLAQSFNPFGSIIGMVVAQQ 152 (410)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999988888888888876653
No 85
>PF07690 MFS_1: Major Facilitator Superfamily; InterPro: IPR011701 Among the different families of transporter, only two occur ubiquitously in all classifications of organisms. These are the ATP-Binding Cassette (ABC) superfamily and the Major Facilitator Superfamily (MFS). The MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients [, ].; GO: 0055085 transmembrane transport, 0016021 integral to membrane; PDB: 2GFP_B 3O7P_A 3O7Q_A 1PW4_A.
Probab=96.77 E-value=0.0045 Score=52.56 Aligned_cols=46 Identities=20% Similarity=0.462 Sum_probs=38.1
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccc
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAP 101 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~ 101 (224)
++..++.+..+.....+..|.+|.+.|++..|+.+....+++.++|
T Consensus 307 ~~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~~~~~igP 352 (352)
T PF07690_consen 307 FLIGFGFGIVFPILFSLIQELVPPEYRGTAFGLFNSIGSLGGIIGP 352 (352)
T ss_dssp HHHHHHHHHHCHHHHHHHHCCCHTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCC
Confidence 3334455556677889999999999999999999999999988876
No 86
>PRK11010 ampG muropeptide transporter; Validated
Probab=96.73 E-value=0.0088 Score=54.56 Aligned_cols=50 Identities=16% Similarity=0.103 Sum_probs=37.0
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++..++.+........+.+|.+|.+.|+++.++.....++|..+++.+..
T Consensus 115 ~l~~~~~a~~~i~~~a~~~~~~~~~~rg~~~~i~~~g~~lG~llg~~l~~ 164 (491)
T PRK11010 115 VVIAFCSASQDIVFDAWKTDVLPAEERGAGAAISVLGYRLAMLVSGGLAL 164 (491)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33334444444456799999999999999999998888888887775443
No 87
>TIGR00883 2A0106 metabolite-proton symporter. This model represents the metabolite:H+ symport subfamily of the major facilitator superfamily (pfam00083), including citrate-H+ symporters, dicarboxylate:H+ symporters, the proline/glycine-betaine transporter ProP, etc.
Probab=96.73 E-value=0.0036 Score=53.88 Aligned_cols=39 Identities=13% Similarity=0.111 Sum_probs=31.1
Q ss_pred hhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 66 YTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 66 ~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
......+.+|.+|.+.|++..++......+|..+++.+.
T Consensus 114 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~G~~i~~~~~ 152 (394)
T TIGR00883 114 WGGAALYLAEYAPPGKRGFYGSFQQVGAPVGLLLAALTV 152 (394)
T ss_pred ccccHHHhhhcCCcccchHHHHHHHHHHHHHHHHHHHHH
Confidence 345678999999999999999988877777777776543
No 88
>PRK10091 MFS transport protein AraJ; Provisional
Probab=96.71 E-value=0.0071 Score=52.91 Aligned_cols=92 Identities=4% Similarity=-0.092 Sum_probs=51.8
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
.....+.||.|||+.+..+......... +. .+ .++ .+...+.-++..+..+........+..|++|.+.|+
T Consensus 56 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~-l~-~~------~~~-~~~l~~~r~l~G~~~~~~~~~~~~~~~~~~~~~~~~ 126 (382)
T PRK10091 56 PIIALFSSRYSLKHILLFLVALCVIGNA-MF-TL------SSS-YLMLAIGRLVSGFPHGAFFGVGAIVLSKIIKPGKVT 126 (382)
T ss_pred HHHHHHHccCccHHHHHHHHHHHHHHHH-HH-HH------hCc-HHHHHHHHHHHHhhhHHHHHHHHHHHHHhCChHHhh
Confidence 4445566788888776553332222211 11 11 111 222222323333333333445567789999999999
Q ss_pred HHHHHHHHHHhhhccccccee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+.+++......++..++|.+.
T Consensus 127 ~~~~~~~~~~~~g~~~g~~l~ 147 (382)
T PRK10091 127 AAVAGMVSGMTVANLLGIPLG 147 (382)
T ss_pred HHHHHHHHHHHHHHHHhccHH
Confidence 999988777777777776654
No 89
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=96.65 E-value=0.0049 Score=54.40 Aligned_cols=47 Identities=6% Similarity=-0.054 Sum_probs=36.5
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++.+........+.+|++|.+-|+++.|+......++..++|.+...
T Consensus 100 ~~~a~~~pa~~a~i~~~~~~~~~~~a~~~~~~~~~~~~~~Gp~lgG~ 146 (393)
T PRK11195 100 IGAAAYSPAKYGILTELLPGEKLVKANGWMEGSTIAAILLGTVLGGA 146 (393)
T ss_pred HHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344445678899999999999999999888887777777776543
No 90
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=96.60 E-value=0.011 Score=53.93 Aligned_cols=93 Identities=13% Similarity=0.014 Sum_probs=51.1
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhccccc-chHHHH
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMF-PTPLRQ 83 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-Pt~vR~ 83 (224)
....+.||.|||+.++.+......... +. .+ .+. .+..++.-.+..++.+...........+.| |.+.|+
T Consensus 60 ~~G~l~D~~Grk~~l~~~~~~~~~~~~-~~-~~------a~~-~~~li~~r~l~G~g~~~~~~~~~~~l~~~~~~~~~r~ 130 (495)
T PRK14995 60 PMGALGDRIGFKRLLMLGGTLFGLASL-AA-AF------SPT-ASWLIATRALLAIGAAMIVPATLAGIRATFTEEKQRN 130 (495)
T ss_pred HHHHHHHHhccHHHHHHHHHHHHHHHH-HH-HH------cCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHH
Confidence 344566778888876664332222111 11 11 111 222222222222333333333444455665 789999
Q ss_pred HHHHHHHHHHhhhcccccceeeh
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+++|+......+|..++|.+...
T Consensus 131 ~~~g~~~~~~~~g~~~gp~lgg~ 153 (495)
T PRK14995 131 MALGVWAAVGSGGAAFGPLVGGI 153 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999998888876644
No 91
>PRK12382 putative transporter; Provisional
Probab=96.59 E-value=0.0061 Score=53.31 Aligned_cols=39 Identities=8% Similarity=-0.049 Sum_probs=29.4
Q ss_pred hhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 67 TVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
.....+..|.+|.+.|++++|+......++..++|.+..
T Consensus 131 ~~~~~~~~~~~~~~~r~~a~~~~~~~~~~g~~~g~~~~~ 169 (392)
T PRK12382 131 TGALTWGLGLVGPKHSGKVMSWNGMAMYGALAAGAPLGL 169 (392)
T ss_pred HHHHHHHHhhCCccccchhhhHHHHHHHHHHHHHHHHHH
Confidence 344567789999999999999877666666666666543
No 92
>PRK03633 putative MFS family transporter protein; Provisional
Probab=96.50 E-value=0.011 Score=51.68 Aligned_cols=95 Identities=9% Similarity=0.005 Sum_probs=51.9
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.++...+.||.|||+.+..+......... .. .+. + + .+..++..++..+..+...........+.+|.+.|
T Consensus 58 ~~~~g~l~dr~g~k~~~~~~~~~~~~~~~-~~-~~~-----~-~-~~~l~~~~~l~G~~~~~~~~~~~~~~~~~~~~~~~ 128 (381)
T PRK03633 58 TLLAGYVIKRIGFNRSYYLASLIFAAGCA-GL-GLM-----V-G-FWSWLAWRFVAGIGCAMIWVVVESALMCSGTSRNR 128 (381)
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHH-HH-HHh-----c-c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHH
Confidence 34455667788777765553332222111 11 111 1 1 22222232333333333333344556688899999
Q ss_pred HHHHHHHHHHHhhhcccccceeeh
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++.+++......+|..++|.+...
T Consensus 129 ~~~~~~~~~~~~~g~~~g~~~~~~ 152 (381)
T PRK03633 129 GRLLAAYMMVYYLGTVLGQLLVSK 152 (381)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999888888888877776543
No 93
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=96.49 E-value=0.012 Score=51.95 Aligned_cols=36 Identities=17% Similarity=0.029 Sum_probs=27.4
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHHhhhc-ccccce
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIGRIGQ-VIAPQV 103 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~-~~~~~~ 103 (224)
....+..|.+|.+.|++++|+......+|. ..+|.+
T Consensus 125 ~~~~~~~~~~~~~~~g~~~g~~~~~~~~g~~~~g~~~ 161 (402)
T TIGR00897 125 SFLVWVVYNTKQDNLSSAVGWFWAVYSIGIGVFGSYY 161 (402)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 445677899999999999999887777764 355543
No 94
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=96.43 E-value=0.0081 Score=52.90 Aligned_cols=91 Identities=14% Similarity=0.113 Sum_probs=48.3
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+....+.||.|||+.+..+.........+.. +. + +.. ..++.-++..+..+........+..|.|| +.|+
T Consensus 62 ~~~g~l~dr~G~r~~l~~~~~l~~~~~~~~~--~a-----~-~~~-~ll~~r~l~Gig~~~~~~~~~~~~~~~~~-~~~~ 131 (393)
T PRK09705 62 LAGSWLHQHVSERRSVAISLLLIAVGALMRE--LY-----P-QSA-LLLSSALLGGVGIGIIQAVMPSVIKRRFQ-QRTP 131 (393)
T ss_pred hhhHHHHHHhCchHHHHHHHHHHHHHHHHHH--HC-----c-chH-HHHHHHHHHHhHHHHHhhhhhHHHHHHcc-ccch
Confidence 4455667777777776654433332222111 11 1 112 22223333334444444455677889998 6789
Q ss_pred HHHHHHHHHHhhhccccccee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~ 104 (224)
..+|+......+|+.+++.+.
T Consensus 132 ~~~g~~~~~~~~g~~~g~~~~ 152 (393)
T PRK09705 132 LVMGLWSAALMGGGGLGAAIT 152 (393)
T ss_pred hHHHHHHHHHHHHHHHHHHHH
Confidence 999887665555555555443
No 95
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=96.43 E-value=0.0065 Score=53.21 Aligned_cols=39 Identities=5% Similarity=-0.109 Sum_probs=28.7
Q ss_pred hhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 66 YTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 66 ~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
......+..|.+|.+.|++++++......+|..++|.+.
T Consensus 130 ~~~~~~~~~~~~~~~~r~~~~~~~~~~~~~g~~~g~~l~ 168 (399)
T PRK05122 130 GTGSILWGIGRVGALHTGRVISWNGIATYGALAIGAPLG 168 (399)
T ss_pred cchHHHHHHhhcChhhhccchhhhhhhhhHHHHHHHHHH
Confidence 344567778999999999999887666666666666544
No 96
>TIGR00886 2A0108 nitrite extrusion protein (nitrite facilitator).
Probab=96.42 E-value=0.0072 Score=51.95 Aligned_cols=40 Identities=10% Similarity=0.091 Sum_probs=30.7
Q ss_pred HHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhc
Q psy14099 57 IGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQ 97 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~ 97 (224)
+..++.+...+..+...+|++| +.|++..|+.+..+++|+
T Consensus 327 ~~~~~~g~~~~~~~~~~~~~~~-~~~g~~~g~~~~~~~~g~ 366 (366)
T TIGR00886 327 ALFFFSGAGNGSTFALVPHIFR-RATGAVSGLVGAIGNLGG 366 (366)
T ss_pred HHHHHhccccchhhhcchhhch-hhcccHHHHHHHhccCCC
Confidence 3334445556678899999998 689999999998888764
No 97
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=96.41 E-value=0.019 Score=50.62 Aligned_cols=42 Identities=14% Similarity=0.067 Sum_probs=31.2
Q ss_pred HHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 63 TSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 63 ~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+........+.+|.+|.+-|+++.++......+|..+++.+.
T Consensus 109 ~~~~~~~~al~~~~~~~~~r~~~~~~~~~g~~~g~i~g~~l~ 150 (402)
T PRK11902 109 ASQDIVFDAYSTDVLHPEERGAGAAVKVLGYRLAMLVSGGLA 150 (402)
T ss_pred HHHHHHHHHHHHHhcChhhhhHHHHHHHHHHHHHHHHHhHHH
Confidence 333345678999999999999999987776666666666543
No 98
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=96.41 E-value=0.016 Score=52.78 Aligned_cols=46 Identities=15% Similarity=-0.015 Sum_probs=32.7
Q ss_pred HHHHHHhhhhHhhhcccccchHHHH--HHHHHHHHHHhhhccccccee
Q psy14099 59 ITGITSAYTVLYVNTVDMFPTPLRQ--SLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 59 ~~~~~~~~~~~~~~~~ElfPt~vR~--~g~g~~~~~~~~~~~~~~~~~ 104 (224)
.+..+....+.-++.+|+.|.+.|. .+.++.+....+|+.+++.+.
T Consensus 125 d~~~n~~~~p~rALiaDl~p~~~~~~~~a~~~~~~~~~lG~ilg~~~g 172 (477)
T TIGR01301 125 DVANNMLQGPCRAFLADLTGGDARRTRIANAYFSFFMAIGNVLGYAAG 172 (477)
T ss_pred HHHHHHHHHHHHHhcccccCchhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3455556667789999999998774 567766666677777666544
No 99
>KOG0254|consensus
Probab=96.41 E-value=0.007 Score=55.44 Aligned_cols=90 Identities=11% Similarity=0.131 Sum_probs=51.9
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL 81 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 81 (224)
+.+++..+.|+.|||..++.+.....+...+.. . ... .....+.=++..+..++...+..+|.+|+=|+++
T Consensus 105 g~l~~g~l~d~~GRk~~l~~~~~~~~iG~ii~~--~------a~~-~~~l~~GR~l~G~g~G~~~~~~piy~sEiap~~~ 175 (513)
T KOG0254|consen 105 GSLLAGRLGDRIGRKKTLLLAVVLFLIGAIIIA--L------APS-WYQLIVGRILTGLGVGGASVLAPVYISEIAPAHI 175 (513)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHH--H------hhh-HHHHHHHHHHhccchhhhhhcchhhHhhcCChhh
Confidence 456667788999999876653222211111011 0 111 1122222233334444555578999999999999
Q ss_pred HHHHHHHHHHHHhhhcccc
Q psy14099 82 RQSLLAFCSMIGRIGQVIA 100 (224)
Q Consensus 82 R~~g~g~~~~~~~~~~~~~ 100 (224)
|+.-.+.......+|-.++
T Consensus 176 RG~l~~~~~l~~~~Gi~~~ 194 (513)
T KOG0254|consen 176 RGTLVSLYQLFITIGILLG 194 (513)
T ss_pred hHHHHHHHHHHHHHHHHHH
Confidence 9998887666555555544
No 100
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=96.38 E-value=0.011 Score=51.57 Aligned_cols=40 Identities=15% Similarity=-0.020 Sum_probs=31.5
Q ss_pred hhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 66 YTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 66 ~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
......+..|.+|.+.|+++.|+......+|..++|.+..
T Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 163 (408)
T PRK09874 124 VPNANALIATQVPRNKSGWALGTLSTGGVSGALLGPLAGG 163 (408)
T ss_pred HHhHHHHHHHhcCHhhhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 3445567889999999999999988877888877776554
No 101
>PRK11273 glpT sn-glycerol-3-phosphate transporter; Provisional
Probab=96.38 E-value=0.015 Score=52.15 Aligned_cols=38 Identities=13% Similarity=0.357 Sum_probs=30.2
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHHhhhccc-ccceee
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVI-APQVFL 105 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~-~~~~~~ 105 (224)
....+..|.+|++.|+++.|+.+..+.+|+.+ +|.+..
T Consensus 367 ~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~~~g~~v~g 405 (452)
T PRK11273 367 LIGLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVG 405 (452)
T ss_pred HHHHHHHHHcChhhhhhHHHHHHHHHHHHHHHhhhhhHH
Confidence 34567789999999999999999888887654 676554
No 102
>PRK09556 uhpT sugar phosphate antiporter; Reviewed
Probab=96.24 E-value=0.0021 Score=58.01 Aligned_cols=48 Identities=17% Similarity=0.112 Sum_probs=35.6
Q ss_pred HHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 57 IGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+..++.+..+.....+.+|.||.+.|++.+|+....+.+|+.+++.+.
T Consensus 131 l~G~~~~~~~~~~~~~i~~~~~~~~rg~a~gi~~~~~~lG~~l~~~i~ 178 (467)
T PRK09556 131 LSGFFQSTGGPCSYSTITRWTPRRKRGRFLGFWNISHNLGGAGAGGVA 178 (467)
T ss_pred HHHHHHhccchHHHHHHHHHcCccceeeeEEeeecccchhhhHHHHHH
Confidence 333444444556678999999999999999988777777777776654
No 103
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.23 E-value=0.018 Score=52.24 Aligned_cols=47 Identities=21% Similarity=0.273 Sum_probs=34.7
Q ss_pred HHHHHhhhhHhhhcccccch------H---------------HHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 60 TGITSAYTVLYVNTVDMFPT------P---------------LRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt------~---------------vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+..+..++.++-..+.+||. + .=+...|+..+.|.+|+++.|.++..
T Consensus 357 ~~~G~gngsvfk~ip~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~v~G~v~a~G~~Ggf~~p~~~g~ 424 (462)
T PRK15034 357 LTAGLGSGSTFQMIAVIFRQITIYRVKMKGGSDEQAQREAVTETAAALGFISAIGAVGGFFIPQAFGM 424 (462)
T ss_pred HHhcccchHHHHhhHHHHhhhhhhcccccccchhHHhhHHHHHHHHHHHHHHHHHHcccchhhHHHHH
Confidence 44555677889899999995 0 23456777889999999999976543
No 104
>PRK11043 putative transporter; Provisional
Probab=96.21 E-value=0.017 Score=50.69 Aligned_cols=38 Identities=13% Similarity=0.199 Sum_probs=28.1
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
....+.+|.+|.+.|....+.......+++.++|.+..
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~ 151 (401)
T PRK11043 114 IWQALVIDRYPAQKANRVFATIMPLVALSPALAPLLGA 151 (401)
T ss_pred HHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567889999998888888777666677666666543
No 105
>KOG2615|consensus
Probab=96.18 E-value=0.0043 Score=54.62 Aligned_cols=85 Identities=13% Similarity=0.153 Sum_probs=53.9
Q ss_pred HHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHH---HHhhhhHhhhcccccchHHHHH
Q psy14099 8 WMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGI---TSAYTVLYVNTVDMFPTPLRQS 84 (224)
Q Consensus 8 ~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ElfPt~vR~~ 84 (224)
.+.|+.|||+.++.++.+.++... ++. .+. . . ....+.++.. .+..++.-++.+|+++.+.|+.
T Consensus 90 ~~SD~yGRkpvll~c~~~va~s~l-l~~--------~S~-~--F-~afv~aR~l~Gi~kgnl~v~rAiisdV~sek~r~l 156 (451)
T KOG2615|consen 90 CLSDRYGRKPVLLACLIGVALSYL-LWA--------LSR-N--F-AAFVLARFLGGIFKGNLSVIRAIISDVVSEKYRPL 156 (451)
T ss_pred hhhhhhCchHHHHHHHHHHHHHHH-HHH--------HHH-H--H-HHHHHHHHhhhhccCchHHHHHHHHhhcChhhccc
Confidence 345777888877665555444332 221 111 1 1 2222334433 4455678899999999999999
Q ss_pred HHHHHHHHHhhhcccccceee
Q psy14099 85 LLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 85 g~g~~~~~~~~~~~~~~~~~~ 105 (224)
|++.....-.+|.+++|++-.
T Consensus 157 ~ms~v~~a~~lGfilGPmIGg 177 (451)
T KOG2615|consen 157 GMSLVGTAFGLGFILGPMIGG 177 (451)
T ss_pred eeeeeehhhhcchhhcchhhh
Confidence 999987777777777777654
No 106
>PRK10489 enterobactin exporter EntS; Provisional
Probab=96.17 E-value=0.011 Score=52.27 Aligned_cols=46 Identities=20% Similarity=0.042 Sum_probs=34.9
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++.+........+.+|.+|.+.|+++.++......+|..++|.+..
T Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~g~~l~g 167 (417)
T PRK10489 122 FFGSLGVTALLAATPALVGRENLMQAGAITMLTVRLGSVISPALGG 167 (417)
T ss_pred HHHHHHHHHHhhhhhhccCHHHHHHHHHHHHHHHhHHHHhHHHHHH
Confidence 3333344556778999999999999999988888888887777654
No 107
>TIGR00806 rfc RFC reduced folate carrier. Proteins of the RFC family are so-far restricted to animals. RFC proteins possess 12 putative transmembrane a-helical spanners (TMSs) and evidence for a 12 TMS topology has been published for the human RFC. The RFC transporters appear to transport reduced folate by an energy-dependent, pH-dependent, Na+-independent mechanism. Folate:H+ symport, folate:OH- antiport and folate:anion antiport mechanisms have been proposed, but the energetic mechanism is not well defined.
Probab=96.10 E-value=0.021 Score=51.99 Aligned_cols=50 Identities=10% Similarity=0.082 Sum_probs=40.0
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++..++-+..+ ..+.|+...||.+-|+++.|+......+|.++++.+...
T Consensus 123 ~llGvaEA~~~-A~~syI~~WfP~kER~ratsi~~sg~~vG~~Ia~~L~ql 172 (511)
T TIGR00806 123 VFYSVTMAARI-AYSSYIFSLVPPSRYQRAAAYSRAAVLLGVFLSSVLGQL 172 (511)
T ss_pred HHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455555 788999999999999999999999998888888876654
No 108
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=96.09 E-value=0.0097 Score=54.37 Aligned_cols=39 Identities=13% Similarity=0.058 Sum_probs=25.6
Q ss_pred hhhHhhhcccccchHH--HHHHHHHHHHHHhhhccccccee
Q psy14099 66 YTVLYVNTVDMFPTPL--RQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 66 ~~~~~~~~~ElfPt~v--R~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
........+|+||.+. |..+.++.+....+|+.++|.+.
T Consensus 123 ~~~~~~li~~~~p~~~~~~~~~~~~~~~~~nig~~~g~~l~ 163 (489)
T PRK10207 123 KANPASLLSKCYPPKDPRLDGAFTLFYMSINIGSLISLSLA 163 (489)
T ss_pred cCCHHHHHHHhcCCCchhhhcchhHHHHHHHHHHHHHHHHH
Confidence 3446788999999874 46666666666666665555433
No 109
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=96.09 E-value=0.02 Score=50.04 Aligned_cols=39 Identities=10% Similarity=0.032 Sum_probs=28.7
Q ss_pred hhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 67 TVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
.....+..|.+|.+.|+...++......++..++|.+..
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~ 153 (394)
T PRK11652 115 VMARTLPRDLYEGTQLRHANSLLNMGILVSPLLAPLIGG 153 (394)
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345567889999999998888877767767666665543
No 110
>PRK10133 L-fucose transporter; Provisional
Probab=96.07 E-value=0.027 Score=50.56 Aligned_cols=95 Identities=12% Similarity=0.022 Sum_probs=53.0
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+....+.||.|||+.+..++........ +..... . .++ .....+..++..+..+........+..|..|.+.|.
T Consensus 79 ~~~g~l~dr~G~r~~l~~g~~~~~~~~~-l~~~~~---~-a~~-~~~ll~~r~l~G~g~g~~~~~~~~~v~~~~~~~~~~ 152 (438)
T PRK10133 79 IPAGILMKKLSYKAGIITGLFLYALGAA-LFWPAA---E-IMN-YTLFLVGLFIIAAGLGCLETAANPFVTVLGPESSGH 152 (438)
T ss_pred HHHHHHHHHhCcHHHHHHHHHHHHHHHH-HHHHHH---h-cCC-HHHHHHHHHHHHHHHHHHHhhHHHHHHHhCChhhHH
Confidence 4455667888888776664433322221 110000 0 111 222222333333444455555667778888888887
Q ss_pred HHHHHHHHHHhhhccccccee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~ 104 (224)
..+++......+|..++|.+.
T Consensus 153 ~~~s~~~~~~~~G~~~g~~~g 173 (438)
T PRK10133 153 FRLNLAQTFNSFGAIIAVVFG 173 (438)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 788888888788888887654
No 111
>PRK15034 nitrate/nitrite transport protein NarU; Provisional
Probab=96.06 E-value=0.035 Score=50.46 Aligned_cols=42 Identities=19% Similarity=0.251 Sum_probs=32.5
Q ss_pred HHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 63 TSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 63 ~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+..+.......++.||.+.|++++|+....+.+|..+++++.
T Consensus 142 g~~f~~~~~~vs~wfp~~~rG~A~Gi~~g~G~~G~~l~~~l~ 183 (462)
T PRK15034 142 GANFASSMGNISFFFPKAKQGSALGINGGLGNLGVSVMQLVA 183 (462)
T ss_pred HHhHHHHHHHHHHHCCHhHhHHHHHHHHHHHhhHHHHHHHHH
Confidence 556677788899999999999999998766666665554444
No 112
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=96.05 E-value=0.013 Score=58.60 Aligned_cols=52 Identities=10% Similarity=-0.138 Sum_probs=40.1
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeehh
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLLL 107 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~~ 107 (224)
++..++.+........+.++++|.+-|+.++|+..+...+|..++|.+....
T Consensus 116 ~l~gi~~a~~~p~~~a~l~~~~~~~~~~~a~~~~~~~~~ig~~igp~l~g~l 167 (1140)
T PRK06814 116 FLMGIHSALFGPIKYSILPDHLNKDELLGANALVEAGTFIAILLGTIIGGLA 167 (1140)
T ss_pred HHHHHHHHhhchHHHHhhHhhcCccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 3333333444456789999999999999999999999999998888877643
No 113
>TIGR00890 2A0111 Oxalate/Formate Antiporter.
Probab=96.02 E-value=0.013 Score=50.04 Aligned_cols=26 Identities=35% Similarity=0.341 Sum_probs=21.5
Q ss_pred hhhHHHHHHHHhhhhccceeeeccCC
Q psy14099 199 KLTIVGSIDGLGALLGSPFCAFISDK 224 (224)
Q Consensus 199 ~~~~~~s~~~~G~~~G~~~~G~lsDr 224 (224)
......+++.++.++|.++.|+++||
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~g~l~dr 266 (377)
T TIGR00890 241 FLVLAVSISSIFNGGGRPFLGALSDK 266 (377)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556788888999999999999997
No 114
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=96.00 E-value=0.0069 Score=55.03 Aligned_cols=41 Identities=15% Similarity=0.085 Sum_probs=31.6
Q ss_pred hhhHhhhcccccchH---HHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 66 YTVLYVNTVDMFPTP---LRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 66 ~~~~~~~~~ElfPt~---vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
......+.+|+||.+ .|+++.++.+....+|+.++|.+...
T Consensus 120 ~~~~~~~~a~~~~~~~~~~r~~~~~~~~~~~niG~~ig~~l~g~ 163 (475)
T TIGR00924 120 KANPSSMVGKLYERGDMPRRDGGFTLFYMSINIGSFISPLLAGV 163 (475)
T ss_pred cCCHHHHHHHhcCCCCcccccceehhHHHHHHHHHHHHHHHHHH
Confidence 345678889999875 48888898888888888888876543
No 115
>PRK10504 putative transporter; Provisional
Probab=95.98 E-value=0.033 Score=49.96 Aligned_cols=46 Identities=17% Similarity=0.140 Sum_probs=36.7
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
++.+..++.......+..|.+.|+++.|+.+....+|..++|.+..
T Consensus 365 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~ig~~i~g 410 (471)
T PRK10504 365 MVNSTRFSSMNTLTLKDLPDNLASSGNSLLSMIMQLSMSIGVTIAG 410 (471)
T ss_pred HHHHHHHHHHHHHHHHcCCHHhccchHHHHHHHHHHHHHHHHHHHH
Confidence 4444555667788889999999999999998888888888877654
No 116
>PRK03699 putative transporter; Provisional
Probab=95.96 E-value=0.022 Score=50.03 Aligned_cols=94 Identities=13% Similarity=-0.021 Sum_probs=52.8
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.++...+.||.+||+.+..........+. ++. . . ++ ... ..+..++..++....+.....+..|..|.+ |
T Consensus 258 ~~~~g~l~dr~~~~~~l~~~~~~~~~~~~-~~~-~----~-~~-~~~-~~~~~~~~G~~~~~~~~~~~~~~~~~~~~~-~ 327 (394)
T PRK03699 258 MWIFSFIVRFFDLQRILTVLAGLALVLMY-LFV-N----T-DD-PSH-LLYAILGLGFFSSAIYTTIITLGSQQTKVA-S 327 (394)
T ss_pred HHHHHHHHHHhchhhHHHHHHHHHHHHHH-HHH-H----c-CC-chH-HHHHHHHHHHHHHHHHHHHHHHHHHHccCC-C
Confidence 44556667888877765543222222111 111 1 1 11 122 222333333444555566667778888754 5
Q ss_pred HHHHHHHHHHHhhhcccccceeeh
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++..|+....+.+|+.++|.+...
T Consensus 328 ~~~~g~~~~~~~~g~~i~p~~~G~ 351 (394)
T PRK03699 328 PKLVNFILTCGTIGTMLTFVVTSP 351 (394)
T ss_pred HHHHHHHHHhhhHHHHHHHHHHHH
Confidence 677888888889999999987654
No 117
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=95.95 E-value=0.036 Score=49.04 Aligned_cols=94 Identities=14% Similarity=0.154 Sum_probs=52.7
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccc------
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFP------ 78 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfP------ 78 (224)
+...+.||.|||+.+..+....+..+. .. .+. ++ ..+...+..++..+..+..+...+.+.+|.-|
T Consensus 276 ~~~~l~~r~g~~~~~~~~~~~~~~~~~-~~-~~~-----~~-~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (437)
T TIGR00792 276 LFPRLVKKFGRKILFAGGILLMVLGYL-IF-FFA-----GS-NLPLILVLIILAGFGQNFVTGLVWALVADTVDYGEWKT 347 (437)
T ss_pred HHHHHHHHhCcHHHHHHHHHHHHHHHH-HH-HHc-----ch-hHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhhc
Confidence 344567788877765554332222222 11 111 11 12222333334444455555667788888754
Q ss_pred -hHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 79 -TPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 79 -t~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.+.+++..|+.+....+|+.+++.+...
T Consensus 348 ~~~~~G~~~~~~~~~~~~g~~lg~~i~g~ 376 (437)
T TIGR00792 348 GVRAEGLVYSVRTFVRKLGQALAGFLVGL 376 (437)
T ss_pred CccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888888888888888876653
No 118
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=95.93 E-value=0.017 Score=52.10 Aligned_cols=37 Identities=5% Similarity=-0.206 Sum_probs=27.8
Q ss_pred hhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 67 TVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
.+...+..|.|| +.|+++.|+.+....+|+.++|.+.
T Consensus 127 ~~~~~~~~~~~~-~~r~~a~g~~~~~~~~g~~~~~~l~ 163 (455)
T TIGR00892 127 QPSLTMLGKYFY-RRRPLANGLAMAGSPVFLSTLAPLN 163 (455)
T ss_pred hHHHHHHHHHHH-hhHHHHHHHHHhcccHHHHHHHHHH
Confidence 345567788887 7899999998887777777666544
No 119
>PRK09528 lacY galactoside permease; Reviewed
Probab=95.83 E-value=0.015 Score=51.57 Aligned_cols=45 Identities=9% Similarity=0.081 Sum_probs=31.2
Q ss_pred HHHhhhhHhhhcccccchHHHHHHHHH-HHHHHhhhcccccceeeh
Q psy14099 62 ITSAYTVLYVNTVDMFPTPLRQSLLAF-CSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 62 ~~~~~~~~~~~~~ElfPt~vR~~g~g~-~~~~~~~~~~~~~~~~~~ 106 (224)
..........+.+|.+|.+.|+++.++ .+....+|+.++|.+...
T Consensus 329 ~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~lg~~ig~~~~G~ 374 (420)
T PRK09528 329 VPFLLVGVFKYITLNFDVRLSATIYLVGFQFAKQLGAVFLSTLAGN 374 (420)
T ss_pred HHHHHHHHHHHHHHHcCccceeeeeeehHHHHHHHHHHHHHHHHHH
Confidence 333344556888999999999988766 345566777777766543
No 120
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=95.82 E-value=0.027 Score=48.49 Aligned_cols=90 Identities=14% Similarity=0.071 Sum_probs=47.5
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+....+.||.|||+.+..+......... .. .. ++ .+..++..++..+..+........+..|.+| +.|+
T Consensus 53 ~~~g~l~dr~g~r~~~~~~~~~~~~~~~-~~--~~-----~~--~~~l~~~~~~~g~g~~~~~~~~~~~~~~~~~-~~~~ 121 (355)
T TIGR00896 53 PLAPWLARRFGEERSVAAGLLLIAAGIL-IR--SA-----PG--TALLFAGTALIGVGIAIINVLLPSLIKRDFP-QRVG 121 (355)
T ss_pred HhHHHHHHHhCchHHHHHHHHHHHHHHH-HH--Hh-----cc--HHHHHHHHHHHHHHHHHHhccchHHHHHhCc-chhh
Confidence 3455566777777765553332222111 11 11 11 2222222233333333333345567788888 5789
Q ss_pred HHHHHHHHHHhhhccccccee
Q psy14099 84 SLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+.+++......+|..++|.+.
T Consensus 122 ~~~~~~~~~~~~g~~i~~~~~ 142 (355)
T TIGR00896 122 LMTGLYSMALMGGAALAAAAT 142 (355)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 999988777777776666544
No 121
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=95.78 E-value=0.038 Score=50.45 Aligned_cols=105 Identities=10% Similarity=0.042 Sum_probs=67.1
Q ss_pred chhhHHHHhcccchH--HHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccch
Q psy14099 2 SRIVCIWMDHVVFRQ--TLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPT 79 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt 79 (224)
|.++..+++||+|-| ++++..+....++.....+++..... .....+.+.++.++..++.+..++..=.+.+|+-|.
T Consensus 333 Ga~~~g~l~~r~g~k~~~~l~~~l~~~~~i~~~g~~G~~~~~~-g~~~~~~f~~~a~~~G~~~G~~qs~sRs~~~~LiP~ 411 (477)
T PF11700_consen 333 GALLFGWLQDRFGPKTKRTLLISLILWIIIPLYGLFGFWPSFF-GLKSPWEFWVLAVLIGLFMGGIQSASRSLFSRLIPP 411 (477)
T ss_pred HHHHHHHHHHHhCCchhHHHHHHHHHHHHHHHHHHHHhhhccc-CcccHHHHHHHHHHHHHHhhhHHHHHHHHHHHhCCC
Confidence 455667888888877 55444333222111101111110000 111233444555555666777778788999999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccceeehh
Q psy14099 80 PLRQSLLAFCSMIGRIGQVIAPQVFLLL 107 (224)
Q Consensus 80 ~vR~~g~g~~~~~~~~~~~~~~~~~~~~ 107 (224)
...+...|+....++..++++|+++...
T Consensus 412 g~e~efFgly~i~gk~ss~lGPll~g~i 439 (477)
T PF11700_consen 412 GREAEFFGLYAITGKASSWLGPLLFGLI 439 (477)
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999988763
No 122
>TIGR00897 2A0118 polyol permease family. This family of proteins includes the ribitol and D-arabinitol transporters from Klebsiella pneumoniae and the alpha-ketoglutarate permease from Bacillus subtilis.
Probab=95.61 E-value=0.065 Score=47.20 Aligned_cols=37 Identities=14% Similarity=0.270 Sum_probs=30.0
Q ss_pred HhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 69 LYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 69 ~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.....+|+.|. .|+++.|+.+....+++.++|.+...
T Consensus 336 ~~~~~~~~~~~-~~g~~~g~~~~~~~lg~~~gp~i~g~ 372 (402)
T TIGR00897 336 LAAVFPTLAPK-HKGAAMSVLNLSAGLSAFLAPAIAVL 372 (402)
T ss_pred HHHHHHhhCcc-hhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456788775 79999999999999999999987654
No 123
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=95.56 E-value=0.022 Score=56.82 Aligned_cols=43 Identities=12% Similarity=-0.045 Sum_probs=30.8
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcc
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQV 98 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~ 98 (224)
++..++.+........+..|..|.+.|++++|+.+.+..+++.
T Consensus 330 ~~~g~~~~~~~~~~~~~~~~~~p~~~rg~~~~~~~~~~~lg~~ 372 (1146)
T PRK08633 330 FLFGFSAGLFIVPLNALIQFRAPEKELGKVLAANNFLQNVGML 372 (1146)
T ss_pred HHHHHHHHHhhHHHHHHHhhcCCccchhhhhHHHHHHHHHHHH
Confidence 3334444445556788999999999999999987766655553
No 124
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=95.47 E-value=0.02 Score=50.82 Aligned_cols=43 Identities=21% Similarity=0.279 Sum_probs=34.3
Q ss_pred HHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 62 ITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 62 ~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
.++.+++...+.++-||.+.+++++|+.- .|.+|..++.++.+
T Consensus 118 ~GasFav~m~~~s~~fP~~~qG~AlGI~g-~GN~G~av~q~~~P 160 (417)
T COG2223 118 AGASFAVGMPNASFFFPKEKQGLALGIAG-AGNLGVAVAQLVAP 160 (417)
T ss_pred ccceehcccccccccCChhhhhHHHHHhc-cccccHHHHHHHHH
Confidence 45677788899999999999999999977 77777666555544
No 125
>PLN00028 nitrate transmembrane transporter; Provisional
Probab=95.46 E-value=0.029 Score=50.91 Aligned_cols=47 Identities=11% Similarity=0.040 Sum_probs=35.0
Q ss_pred HHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 57 IGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+..++.....+..+.+.+|+.| +.|++..|+.+..+.+|+.++|++.
T Consensus 357 l~~~~~~~~~~~~~~~~~~~~~-~~~g~~~g~~~~~g~lg~~i~~~l~ 403 (476)
T PLN00028 357 LFSIFVQAACGATFGIVPFVSR-RSLGVISGLTGAGGNVGAVLTQLLF 403 (476)
T ss_pred HHHHHHHHhhhhhcccCcccCh-hhchhhhhhhhccccHHHHHHHHHH
Confidence 3334444455567788888866 7899999999888889998888764
No 126
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=95.45 E-value=0.04 Score=50.43 Aligned_cols=40 Identities=8% Similarity=-0.075 Sum_probs=28.5
Q ss_pred hhHhhhcccccchH--HHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 67 TVLYVNTVDMFPTP--LRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 67 ~~~~~~~~ElfPt~--vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.....+.+|+||.+ .|..+.++.+....+|+.++|.+...
T Consensus 131 ~~~~~l~~~~f~~~~~~~~~~~~~~~~~~~iG~~~gp~i~g~ 172 (500)
T PRK09584 131 ANPSSLLSTCYEKDDPRLDGAFTMYYMSINIGSFFSMLATPW 172 (500)
T ss_pred CCHHHHHHHhcCCCchhhhhcchHHHHHHHHHHHHHHHHHHH
Confidence 34567889999864 34456777777888888888876643
No 127
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=95.38 E-value=0.011 Score=52.56 Aligned_cols=96 Identities=15% Similarity=0.171 Sum_probs=69.1
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL 81 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 81 (224)
++++..++++|+|-|+++..++.......+ +..+. .. .....++.++..++.++.++..=.|.+++.|.+-
T Consensus 304 g~ii~g~Ld~rfg~k~vl~~~lvi~~~~~~--~~~~~-----~~--~~~f~i~gll~g~s~G~~qA~SRSy~~~lvp~~k 374 (438)
T COG2270 304 GAIIAGFLDERFGSKPVLMIGLVILSIAAL--YLIFL-----EG--ELDFWILGLLVGTSLGGAQASSRSYLARLVPKGK 374 (438)
T ss_pred HHHHHHHHHHHhCCceeehHHHHHHHHHHH--HHHHc-----cc--cHHHHHHHHHHHHhcchHHHHHHHHHHHhCCCcc
Confidence 567788999999988776665544333222 11111 11 2234445555566677788888899999999999
Q ss_pred HHHHHHHHHHHHhhhcccccceeeh
Q psy14099 82 RQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 82 R~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
-++.+|+.+..+|.++.++|+++..
T Consensus 375 ~~~fFglyaltgra~S~~gp~lv~v 399 (438)
T COG2270 375 EGRFFGLYALTGRAASFLGPFLVAV 399 (438)
T ss_pred ccceeehhhhhhhHHHHHHHHHHHH
Confidence 9999999999999999999998764
No 128
>PTZ00207 hypothetical protein; Provisional
Probab=95.36 E-value=0.1 Score=48.87 Aligned_cols=35 Identities=17% Similarity=0.231 Sum_probs=25.9
Q ss_pred HHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcc
Q psy14099 63 TSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQV 98 (224)
Q Consensus 63 ~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~ 98 (224)
+..+........+.|| +.|++.+|+......+|+.
T Consensus 135 ~~~~~~~~~~i~~~Fp-~~RG~a~Gi~~~~~gLGsa 169 (591)
T PTZ00207 135 MLFDLGAVVTVLSVFP-SNRGAVVAIMKTFTGLGSA 169 (591)
T ss_pred HHHHHHHHHHHHHhCh-hhhHHHHHHHHHHHHHHHH
Confidence 3334455667788998 7899999998777777775
No 129
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=95.33 E-value=0.15 Score=47.07 Aligned_cols=97 Identities=14% Similarity=0.042 Sum_probs=53.1
Q ss_pred hhHHHHhcccchHHHHHHHHH-HHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGIT-GITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
+.+..+.||..||++++..-. .++.... +.+... . ..-..+..+++.++...+.........+..+|+.|.+--
T Consensus 63 l~aG~laDr~drrrili~~~~~~~~~~~~-L~~l~~--~--~~~~~~~Ll~~~fl~g~~~a~~~PA~~A~ip~lV~~~~L 137 (524)
T PF05977_consen 63 LFAGALADRFDRRRILILSQLLRALVALL-LAVLAF--F--GLLSPWLLLILTFLLGIGSAFFNPAWQAIIPELVPKEDL 137 (524)
T ss_pred HHHHHHhhcccchHHHHHHHHHHHHHHHH-HHHHHH--h--CcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccHhhH
Confidence 455666777777777655222 1111111 111110 1 111233344444444443333344567999999999998
Q ss_pred HHHHHHHHHHHhhhcccccceee
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
..+.++.+....+...++|.+..
T Consensus 138 ~~A~al~s~~~niar~iGPalgG 160 (524)
T PF05977_consen 138 PAANALNSISFNIARIIGPALGG 160 (524)
T ss_pred HHHHHHHHHHHHHHHhccchHHH
Confidence 88888877666666666666554
No 130
>PF11700 ATG22: Vacuole effluxer Atg22 like; InterPro: IPR024671 Autophagy is a major survival mechanism in which eukaryotes recycle cellular nutrients during stress conditions. Atg22, Avt3 and Avt4 are partially redundant vacuolar effluxers, which mediate the efflux of leucine and other amino acids resulting from autophagy []. This family also includes other transporter proteins.
Probab=95.29 E-value=0.08 Score=48.34 Aligned_cols=95 Identities=20% Similarity=0.264 Sum_probs=59.1
Q ss_pred hhHHHHhcccchHHHHHH-HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLI-GITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
+++.+.|....||+++.. .+.+.+..+.+.+ . ++ +..+...++.+++..++.........|++|+=+.+-+
T Consensus 89 ~lGa~aD~~~~Rk~~l~~~~~~~~~~~~~l~~---v----~~-~~~~~~~~l~iia~v~~~~~~vfyna~LP~la~~~~~ 160 (477)
T PF11700_consen 89 FLGAIADYGGRRKRFLLIFTLLGVLATALLWF---V----SP-GQWWLALVLFIIANVGYEASNVFYNAYLPDLARPEPR 160 (477)
T ss_pred HHHHHHcccccchHHHHHHHHHHHHHHHHHHH---h----Cc-chHHHHHHHHHHHHHHHHHHHHHHHHHhHhhcCCChh
Confidence 456666766667776655 3333333222111 1 12 2234445555666666666666667899999988887
Q ss_pred --------------------------HHHHHHHHHHHhhhcccccceeeh
Q psy14099 83 --------------------------QSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 83 --------------------------~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++-.|.....|.+|+.+.-.+...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vS~~G~a~Gy~G~~v~l~i~l~ 210 (477)
T PF11700_consen 161 VRAAREPSANGNISDSEYEAVDSLTRGRVSGLGWALGYIGGLVALLISLL 210 (477)
T ss_pred hhhhhhhhccCCCChhhhhhHHHhhhchhHHHHHHHHHHHHHHHHHHHHH
Confidence 888888888888888876655443
No 131
>PRK11010 ampG muropeptide transporter; Validated
Probab=95.26 E-value=0.063 Score=48.97 Aligned_cols=42 Identities=12% Similarity=0.165 Sum_probs=30.8
Q ss_pred HHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 63 TSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 63 ~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+...+..+.+..++.|.+.+++..|+.+....+|+.+.+.+.
T Consensus 331 g~~~~~~~a~~~~l~~~~~~~t~~gl~~s~~~lg~~~~~~~~ 372 (491)
T PRK11010 331 GMGTAAFVALLMTLCNKSFSATQFALLSALSAVGRVYVGPVA 372 (491)
T ss_pred HHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHH
Confidence 334455678888888888889999988887777776555443
No 132
>PRK03545 putative arabinose transporter; Provisional
Probab=95.25 E-value=0.076 Score=46.43 Aligned_cols=37 Identities=19% Similarity=0.128 Sum_probs=27.8
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
....+..|..| +.|++++|+.+....+|..++|.+..
T Consensus 314 ~~~~~~~~~~~-~~~~~~~g~~~~~~~~g~~~G~~~~G 350 (390)
T PRK03545 314 AMQVKVLKLAP-DATDVAMALFSGIFNIGIGAGALLGN 350 (390)
T ss_pred HHHHHHHHhCC-CcHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34566778888 58899999888887777777777654
No 133
>TIGR00710 efflux_Bcr_CflA drug resistance transporter, Bcr/CflA subfamily. This subfamily of drug efflux proteins, a part of the major faciliator family, is predicted to have 12 membrane-spanning regions. Members with known activity include Bcr (bicyclomycin resistance protein) in E. coli, Flor (chloramphenicol and florfenicol resistance) in Salmonella typhimurium DT104, and CmlA (chloramphenicol resistance) in Pseudomonas sp. plasmid R1033.
Probab=95.23 E-value=0.1 Score=44.94 Aligned_cols=42 Identities=12% Similarity=0.248 Sum_probs=28.4
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhh-hcccccc
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRI-GQVIAPQ 102 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~-~~~~~~~ 102 (224)
+..+..+.....+..|.+| +.|+++.++.+..... ++..+|.
T Consensus 312 ~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~i~~~~ 354 (385)
T TIGR00710 312 IGNSMISSIAMAYALEDFP-HVAGTASALFGTLRLVLGAIVGYL 354 (385)
T ss_pred HHHHHHHHHHHHHHhccCc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 3344455567788889999 5689999987776654 4444443
No 134
>PF00083 Sugar_tr: Sugar (and other) transporter; InterPro: IPR005828 Recent genome-sequencing data and a wealth of biochemical and molecular genetic investigations have revealed the occurrence of dozens of families of primary and secondary transporters. Two such families have been found to occur ubiquitously in all classifications of living organisms. These are the ATP-binding cassette (ABC) superfamily and the major facilitator superfamily (MFS), also called the uniporter-symporter-antiporter family. While ABC family permeases are in general multicomponent primary active transporters, capable of transporting both small molecules and macromolecules in response to ATP hydrolysis the MFS transporters are single-polypeptide secondary carriers capable only of transporting small solutes in response to chemiosmotic ion gradients. Although well over 100 families of transporters have now been recognised and classified, the ABC superfamily and MFS account for nearly half of the solute transporters encoded within the genomes of microorganisms. They are also prevalent in higher organisms. The importance of these two families of transport systems to living organisms can therefore not be overestimated []. The MFS was originally believed to function primarily in the uptake of sugars but subsequent studies revealed that drug efflux systems, Krebs cycle metabolites, organophosphate:phosphate exchangers, oligosaccharide:H1 symport permeases, and bacterial aromatic acid permeases were all members of the MFS. These observations led to the probability that the MFS is far more widespread in nature and far more diverse in function than had been thought previously. 17 subgroups of the MFS have been identified []. Evidence suggests that the MFS permeases arose by a tandem intragenic duplication event in the early prokaryotes. This event generated a 2-transmembrane-spanner (TMS) protein topology from a primordial 6-TMS unit. Surprisingly, all currently recognised MFS permeases retain the two six-TMS units within a single polypeptide chain, although in 3 of the 17 MFS families, an additional two TMSs are found []. Moreover, the well-conserved MFS specific motif between TMS2 and TMS3 and the related but less well conserved motif between TMS8 and TMS9 [] prove to be a characteristic of virtually all of the more than 300 MFS proteins identified.; GO: 0022857 transmembrane transporter activity, 0055085 transmembrane transport, 0016021 integral to membrane
Probab=95.09 E-value=0.00065 Score=60.57 Aligned_cols=97 Identities=14% Similarity=0.128 Sum_probs=55.2
Q ss_pred chhhHHHHhcccchHHHHHHHHHH-HHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITG-ITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTP 80 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 80 (224)
|.+++..+.||.|||+.++.+... .+..+. .. + .+.. ...+...+.-++..+..++......+|..|.-|.+
T Consensus 62 G~~~~g~~~d~~GRk~~~~~~~~~~~i~~~~-~~--~---~~~~-~~~~~~~~~R~~~G~~~g~~~~~~~~~~~E~~~~~ 134 (451)
T PF00083_consen 62 GALIFGFLADRYGRKPALIISALLMIIGSIL-IA--F---APSY-NNFWMLLIGRFLIGFGIGGAYVVSPIYISEIAPPK 134 (451)
T ss_pred ccccccccccccccccccccccccccccccc-cc--c---cccc-ccccccccccccccccccccccccccccccccccc
Confidence 556666677888888775552222 111111 00 1 1100 01122222223333445556667899999999999
Q ss_pred HHHHHHHHHHHHHhhhcccccceee
Q psy14099 81 LRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 81 vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
.|+...++......+|..++..+..
T Consensus 135 ~R~~~~~~~~~~~~~G~~~~~~~~~ 159 (451)
T PF00083_consen 135 HRGFLSSLFQLFWALGILLASLIGY 159 (451)
T ss_pred ccccccccccccccccccccccccc
Confidence 9998888777666666666665443
No 135
>PRK09705 cynX putative cyanate transporter; Provisional
Probab=95.04 E-value=0.1 Score=45.93 Aligned_cols=94 Identities=17% Similarity=0.188 Sum_probs=52.1
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhccccc-chHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMF-PTPL 81 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Elf-Pt~v 81 (224)
.++...+.||.+||+.+..+.......+. ... .. +.... ... .++..+.....+........+.+ |.+.
T Consensus 257 ~~~~g~l~~r~~~~~~~~~~~~l~~~~~~-~~~-~~-----~~~~~-~~~--~~l~g~g~g~~~~~~~~~~~~~~~~~~~ 326 (393)
T PRK09705 257 ALLMPAMARHQDRRKLLMLALVLQLVGFC-GFI-WL-----PLQLP-VLW--AMVCGLGLGGAFPLCLLLALDHSVQPAI 326 (393)
T ss_pred HHHHHHHHhhccchHHHHHHHHHHHHHHH-HHH-Hc-----cchHH-HHH--HHHHHHhccchHHHHHHHHHhhcCCHHH
Confidence 44556677888888765554332222221 111 11 11111 111 12222223333344444555666 5789
Q ss_pred HHHHHHHHHHHHhhhcccccceeeh
Q psy14099 82 RQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 82 R~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
|++..|+.+..+.+++.++|.+...
T Consensus 327 ~g~~~g~~~~~~~~~~~~gp~~~G~ 351 (393)
T PRK09705 327 AGKLVAFMQGIGFIIAGLAPWFSGV 351 (393)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999888877654
No 136
>PRK14995 methyl viologen resistance protein SmvA; Provisional
Probab=95.02 E-value=0.11 Score=47.39 Aligned_cols=96 Identities=11% Similarity=-0.054 Sum_probs=54.9
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHH
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQS 84 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 84 (224)
+...+.||.|||+.+..+.......+..+. .. ..... .+......++..+..+...........+..|.+.|+.
T Consensus 314 ~~g~l~~r~g~~~~~~~g~~~~~~~~~~l~--~~---~~~~~-~~~~~~~~~l~G~g~g~~~~~~~~~~~~~~~~~~~g~ 387 (495)
T PRK14995 314 IAGILVSRLGLRLVATGGMALSALSFYGLA--MT---DFSTQ-QWQAWGLMALLGFSAASALLASTSAIMAAAPPEKAAA 387 (495)
T ss_pred HHHHHHHHcCchHHHHHHHHHHHHHHHHHH--Hh---cCCCc-hHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCHHhcch
Confidence 344566777777765554332222111111 11 11111 2222223333344445555556677778899999999
Q ss_pred HHHHHHHHHhhhcccccceeeh
Q psy14099 85 LLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 85 g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+.++.+....+|+.+++.+...
T Consensus 388 ~~~~~~~~~~lG~~~G~ai~g~ 409 (495)
T PRK14995 388 AGAIETMAYELGAGLGIAIFGL 409 (495)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999988888888888766543
No 137
>TIGR00899 2A0120 sugar efflux transporter. This family of proteins is an efflux system for lactose, glucose, aromatic glucosides and galactosides, cellobiose, maltose, a-methyl glucoside and other sugar compounds. They are found in both gram-negative and gram-postitive bacteria.
Probab=95.01 E-value=0.1 Score=44.88 Aligned_cols=39 Identities=13% Similarity=0.128 Sum_probs=24.7
Q ss_pred hhHhhhcccccchHHHHHH--HHHHHHHHhhhcccccceee
Q psy14099 67 TVLYVNTVDMFPTPLRQSL--LAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g--~g~~~~~~~~~~~~~~~~~~ 105 (224)
.....+..|..|.+.|..+ .+.......+|..++|.+..
T Consensus 106 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ig~~~~~ 146 (375)
T TIGR00899 106 PQLFALAREHADRTGREAVMFSSVMRAQISLAWVIGPPLAF 146 (375)
T ss_pred HHHHHHHHHHhhhcchhhHHHHHHHHHHHhHHHHHhhhHHH
Confidence 3455677888887777654 45555555666666665543
No 138
>TIGR00712 glpT glycerol-3-phosphate transporter. This model describes a very hydrophobic protein, predicted to span the membrane at least 8 times. The two members confirmed experimentally as glycerol-3-phosphate transporters, from E. coli and B. subtilis, share more than 50 % amino acid identity. Proteins of the hexose phosphate and phosphoglycerate transport systems are also quite similar.
Probab=94.99 E-value=0.052 Score=48.45 Aligned_cols=37 Identities=16% Similarity=0.329 Sum_probs=29.9
Q ss_pred hhhcccccchHHHHHHHHHHHHHHhhhc-ccccceeeh
Q psy14099 70 YVNTVDMFPTPLRQSLLAFCSMIGRIGQ-VIAPQVFLL 106 (224)
Q Consensus 70 ~~~~~ElfPt~vR~~g~g~~~~~~~~~~-~~~~~~~~~ 106 (224)
.....|.+|.+.|++++|+.+..+.+++ .++|.+...
T Consensus 367 ~~~~~~~~~~~~~g~~~g~~~~~~~~gg~~~gp~l~G~ 404 (438)
T TIGR00712 367 GLHALELAPKKAAGTAAGFTGLFGYLGGSVAASAIVGY 404 (438)
T ss_pred HHHHHHhcChhheeeehhhhchHHHhhhhhhcchhHHH
Confidence 3467899999999999999988888875 567876643
No 139
>PRK09874 drug efflux system protein MdtG; Provisional
Probab=94.98 E-value=0.044 Score=47.85 Aligned_cols=48 Identities=10% Similarity=0.052 Sum_probs=35.2
Q ss_pred HHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 59 ITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 59 ~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.++.+........+..|..|.+.|++.+++.+....+|..++|.+...
T Consensus 322 g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~g~~~gp~~~G~ 369 (408)
T PRK09874 322 GAADGALLPAVQTLLVYNSSNQIAGRIFSYNQSFRDIGNVTGPLMGAA 369 (408)
T ss_pred HhhhHhhHHHHHHHHHHhCCcccceeeehHHHHHHHHHHHhhHHHHHH
Confidence 333444444555666788899999999999888888888888876643
No 140
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=94.84 E-value=0.093 Score=49.15 Aligned_cols=89 Identities=16% Similarity=0.099 Sum_probs=46.6
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHH
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQS 84 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 84 (224)
+..-+.|.+|||..++.+....++... +.. ..+.... .++...+..+. .+......+.++|+.|.+.|..
T Consensus 97 ~~G~LSDlfGRr~~~i~g~~l~vvG~I-v~a-------tA~~~~~-~iag~~l~Gvg-aG~~~~~~~~isEl~p~k~R~~ 166 (599)
T PF06609_consen 97 FVGRLSDLFGRRYFFIIGSLLGVVGSI-VCA-------TAQNMNT-FIAGMVLYGVG-AGVQELAALAISELVPNKWRGL 166 (599)
T ss_pred hhHHHHHHhcchHHHHHHHHHHHhHHH-Hhh-------cCCcHHH-HHHHHHHHHHh-hHHHHHHHHHHHHhcccchhhh
Confidence 345567899999887764332222221 110 0222222 22332333332 2233345667899999999988
Q ss_pred HHHHHHHHHhhhcccccce
Q psy14099 85 LLAFCSMIGRIGQVIAPQV 103 (224)
Q Consensus 85 g~g~~~~~~~~~~~~~~~~ 103 (224)
+.++.....-+....+|++
T Consensus 167 ~~~~~~~~~i~~~~~~~~i 185 (599)
T PF06609_consen 167 GLAIASIPFIITTWISPLI 185 (599)
T ss_pred HhHHHHHHHHhhhcccHHH
Confidence 8877654443333344443
No 141
>PRK11646 multidrug resistance protein MdtH; Provisional
Probab=94.79 E-value=0.13 Score=45.51 Aligned_cols=40 Identities=13% Similarity=-0.027 Sum_probs=34.2
Q ss_pred hhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 67 TVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.....+..|..|.+.|+++.|+.+....+|+.++|.+...
T Consensus 316 p~~~~~~~~~~p~~~~g~~~g~~~~~~~~g~~ig~~l~G~ 355 (400)
T PRK11646 316 PARETLSASLADARARGSYMGFSRLGLALGGAIGYIGGGW 355 (400)
T ss_pred ccHHHHHHhcCCcccchhhhhHHHHHHHHHHHhcccchHH
Confidence 3456888899999999999999988888898889987765
No 142
>PRK10429 melibiose:sodium symporter; Provisional
Probab=94.65 E-value=0.12 Score=46.87 Aligned_cols=96 Identities=14% Similarity=0.116 Sum_probs=50.5
Q ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccc-----cchH
Q psy14099 6 CIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDM-----FPTP 80 (224)
Q Consensus 6 ~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El-----fPt~ 80 (224)
...+.||.|||..++.+....++.....+... ..+ + +..+..++..++..+..+..+...+.+.+|+ ++|.
T Consensus 286 ~~~l~~r~gkk~~~~~~~~~~~~~~~~~~~~~--~~~-~-~~~~~~~i~~~l~g~~~~~~~~~~~am~ad~id~~e~~tG 361 (473)
T PRK10429 286 FPRLVKSLSRRILWAGASIFPVLSCGVLLLMG--LAA-P-HNALLIVIAGILLNIGTALFWVLQVIMVADTVDYGEYKLG 361 (473)
T ss_pred HHHHHHHcCcHHHHHHHHHHHHHHHHHHHHHh--ccC-c-hhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhHhcC
Confidence 34566788888776543322121111111100 011 1 2223333333344445555666678888998 7788
Q ss_pred HHHHHHHH--HHHHHhhhcccccceee
Q psy14099 81 LRQSLLAF--CSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 81 vR~~g~g~--~~~~~~~~~~~~~~~~~ 105 (224)
.|..|+.+ ...+..++..+++.+..
T Consensus 362 ~R~~G~~~s~~~~~~K~~~al~~~i~g 388 (473)
T PRK10429 362 IRCESIAYSVQTMVVKGGSAFAAFFIG 388 (473)
T ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 88777655 45566777777766553
No 143
>TIGR00892 2A0113 monocarboxylate transporter 1.
Probab=94.50 E-value=0.25 Score=44.44 Aligned_cols=51 Identities=12% Similarity=0.095 Sum_probs=40.3
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++..+..+......+....|.+|.+.|++++|+.+....+|+.++|.+...
T Consensus 341 ~~~G~~~g~~~~~~~~~~~~~~~~~~~g~~~g~~~~~~~lg~~igp~i~G~ 391 (455)
T TIGR00892 341 IFFGLSFGSVGALLFEVLMDLVGAQRFSSAVGLVTIVECCAVLIGPPLAGR 391 (455)
T ss_pred HHHHHHhchHHHHHHHHHHHHhhHHHHhhHHhHHHHHHHHHHHccccceee
Confidence 333344444555677888999999999999999999999999999987764
No 144
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=94.38 E-value=0.23 Score=43.38 Aligned_cols=47 Identities=9% Similarity=0.027 Sum_probs=34.6
Q ss_pred HHHHHhhhhHhhhcccccch-HHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 60 TGITSAYTVLYVNTVDMFPT-PLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt-~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+..+..+...+.+..+..+. +.|++..++.+....+|..++|.+...
T Consensus 315 ~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~lg~~~g~~~~G~ 362 (390)
T TIGR02718 315 LITGITSVAIYTAFMRFAGDGDQAGTDVTAVQSTRDLGELIASSIAGY 362 (390)
T ss_pred HHHHHHHHHHHHHHHHHhCcccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444555566666666665 899999999999999999888876643
No 145
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=94.36 E-value=0.064 Score=47.00 Aligned_cols=91 Identities=7% Similarity=-0.034 Sum_probs=48.9
Q ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHHH
Q psy14099 6 CIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSL 85 (224)
Q Consensus 6 ~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g 85 (224)
...+.||.|||+.+..+.....+... .+. . . ++ .+......++..+...........+..|.+|.+.|+++
T Consensus 274 ~g~l~~r~g~~~~l~~~~~l~~l~~~-~~~-~---~--~~--~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~~~~~~at~ 344 (396)
T TIGR00882 274 APLIINRIGAKNALLIAGTIMSVRII-GSS-F---A--TT--ALEVVILKMLHAFEVPFLLVGCFKYITSQFDVRLSATI 344 (396)
T ss_pred HHHHHHHhccchhHHHHHHHHHHHHH-HHH-h---c--CC--hHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcceEEEe
Confidence 34567787777765553332222221 111 1 1 11 22222222333333333334556788899999999987
Q ss_pred HHH-HHHHHhhhcccccceee
Q psy14099 86 LAF-CSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 86 ~g~-~~~~~~~~~~~~~~~~~ 105 (224)
.++ .+....+|+.++|.+..
T Consensus 345 ~~~~~~~~~~lg~~~~~~l~G 365 (396)
T TIGR00882 345 YLIGFQFAKQLAMIFLSTLAG 365 (396)
T ss_pred ehHHHHHHHHHHHHHHHHhHH
Confidence 777 35666777777776554
No 146
>TIGR00885 fucP L-fucose:H+ symporter permease. This family describes the L-fucose permease in bacteria. L-fucose(6-deoxy-L-galactose) is a monosaccharide found in glycoproteins and cell wall polysaccharides. L-fucose is used in bacteria through an inducible pathway mediated by atleast four enzymes: a permease, isomerase, kinase and an aldolase which are encoded by fucP, fucI, fucK, fucA respectively. The fuc genes belong to a regulon comprising of four linked operons: fucO, fucA, fucPIK and fucR. The positive regulator is encoded by fucR, whose protein responds to fuculose-1-phosphate, which acts as an effector.
Probab=94.28 E-value=0.15 Score=45.34 Aligned_cols=92 Identities=14% Similarity=0.189 Sum_probs=56.2
Q ss_pred chhhHHHHhcccchHHHHHH-HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLI-GITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTP 80 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 80 (224)
|.+++.++.||.++|+++.. .+.+.+..+. .. . .++.. . .....+..++.+..|...+....+..+.+
T Consensus 285 GR~~~~~l~~r~~~~~~l~i~~~~~~~~~ll--~~-~------~~~~~-~-~~~l~~~glf~s~~fp~i~sl~~~~~g~~ 353 (410)
T TIGR00885 285 SRFIGTWLISYLAAHKVLMAYAIIGMALCLG--SI-F------AGGHV-G-LYCLTLCSAFMSLMFPTIYGIALKGLGQD 353 (410)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHHH--HH-H------cCChH-H-HHHHHHHHHHHHHHHHHHHHHHHhhhhhh
Confidence 46677777788877766544 3333322221 11 1 11211 2 23333444667888888999999999988
Q ss_pred HHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 81 LRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 81 vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.+..+.++.... +|+.+.|.+...
T Consensus 354 ~~~~s~~l~~~~--~Gga~~p~l~G~ 377 (410)
T TIGR00885 354 TKYGAAGLVMAI--IGGGIVPPLQGF 377 (410)
T ss_pred hhhhHHHHHHHH--hccchHHHHHHH
Confidence 876666665544 888888886654
No 147
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=94.20 E-value=0.23 Score=44.45 Aligned_cols=58 Identities=12% Similarity=0.154 Sum_probs=42.4
Q ss_pred hHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhh-hcccccceee
Q psy14099 48 VVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRI-GQVIAPQVFL 105 (224)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~-~~~~~~~~~~ 105 (224)
..+..++.++..|+..+..-.+-+...|.=|.+--+++.|+...++.+ |+..+.....
T Consensus 346 ~~l~~~~l~~iGf~IyGPqmLiGl~a~e~~pK~AaGtA~Gf~Glf~Yl~Ga~~a~~~~g 404 (448)
T COG2271 346 YLLDAILLFIIGFLIYGPQMLIGLAAAEFVPKKAAGTATGFVGLFAYLIGAALAGLPLG 404 (448)
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHhccccHhhccchhchhhhHHHHhhHHhcCCcce
Confidence 344444555555666666666788999999999999999999888888 6666665443
No 148
>TIGR00792 gph sugar (Glycoside-Pentoside-Hexuronide) transporter. GPH:cation symporters catalyze uptake of sugars in symport with a monovalent cation (H+ or Na+). Members of this family includes transporters for melibiose, lactose, raffinose, glucuronides, pentosides and isoprimeverose. Mutants of two groups of these symporters (the melibiose permeases of enteric bacteria, and the lactose permease of Streptococcus thermophilus) have been isolated in which altered cation specificity is observed or in which sugar transport is uncoupled from cation symport (i.e., uniport is catalyzed). The various members of the family can use Na+, H+ or Li, Na+ or Li+, H+ or Li+, or only H+ as the symported cation. All of these proteins possess twelve putative transmembrane a-helical spanners.
Probab=94.16 E-value=0.16 Score=44.90 Aligned_cols=36 Identities=14% Similarity=0.156 Sum_probs=25.9
Q ss_pred hhHhhhccccc-chHHHHHHHHHHHHHHhhhcccccc
Q psy14099 67 TVLYVNTVDMF-PTPLRQSLLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 67 ~~~~~~~~Elf-Pt~vR~~g~g~~~~~~~~~~~~~~~ 102 (224)
.+...+.+|+. |.+.|++..++....+.+|+.+++.
T Consensus 118 ~~~~al~~~~~~~~~~R~~~~~~~~~~~~~g~~l~~~ 154 (437)
T TIGR00792 118 IPYWSLVPAITLDPRERESLSTFRRFGATLGGLLVAV 154 (437)
T ss_pred ccHhhCcccccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34567888987 5688999888877777666655443
No 149
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=94.11 E-value=0.19 Score=43.04 Aligned_cols=93 Identities=6% Similarity=-0.088 Sum_probs=52.9
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL 81 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 81 (224)
|.+++..+.||+++|+++..+....+.... +.. . .+... .. ...++..++.+..+........+.+|.+.
T Consensus 194 Gr~~~~~l~~r~g~~~~l~~~~~l~~~~~~-l~~-~------~~~~~-~~-~~~~l~g~~~s~i~P~~~s~a~~~~~~~~ 263 (310)
T TIGR01272 194 GRFIGSAVMPMISQGRYLAFNAFLAVLLSI-GAA-L------THGYV-AM-WFVLALGLFNSIMFPTIFSLALNALGRHT 263 (310)
T ss_pred HHHHHHHHHHHhCHHHHHHHHHHHHHHHHH-HHH-H------cCCHH-HH-HHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Confidence 456677778888876665443322222111 111 1 11111 12 22333446677778777888888888653
Q ss_pred HHHHHHHHHHHHhhhcccccceeeh
Q psy14099 82 RQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 82 R~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+++.++. ..+.+|+.+.|.+...
T Consensus 264 -~~asai~-~~~~~Gg~i~P~l~G~ 286 (310)
T TIGR01272 264 -SQGSGIL-CLAIVGGAIVPLLQGS 286 (310)
T ss_pred -hhhHHHH-HHHHhcchHHHHHHHH
Confidence 3455553 5778999999976643
No 150
>PRK11043 putative transporter; Provisional
Probab=94.11 E-value=0.27 Score=43.06 Aligned_cols=46 Identities=11% Similarity=0.096 Sum_probs=32.1
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+..+..+.....+..|.+|. .|+++.|+.+..+..++..++.+...
T Consensus 308 ~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~~~~~~~~~~~g~ 353 (401)
T PRK11043 308 AANGAIYPIVVAQALRPFPQ-ATGKAAALQNTLQLGLCFLASLLVSA 353 (401)
T ss_pred HHHHHHHHHHHHHHhhhCcc-cChHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555566677788885 69999999888877777666665543
No 151
>COG2223 NarK Nitrate/nitrite transporter [Inorganic ion transport and metabolism]
Probab=93.56 E-value=0.15 Score=45.36 Aligned_cols=50 Identities=16% Similarity=0.208 Sum_probs=37.8
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+...++.+...+.++-..+-+||.+.. ...|+..+.|.+|++..|..+..
T Consensus 322 l~l~~~~G~GnGsvfk~Ip~if~~~~G-~v~G~vga~G~lGGf~lp~~~g~ 371 (417)
T COG2223 322 LALFVFAGLGNGSVFKMIPVIFPKETG-AVTGIVGAIGGLGGFFLPLAFGV 371 (417)
T ss_pred HHHHHHhccCcchheeechHHHHhhhh-HHHHHHHHhccccccchhHHHHH
Confidence 333445566777899999999998554 46788999999999888876653
No 152
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=93.54 E-value=0.41 Score=42.58 Aligned_cols=89 Identities=10% Similarity=-0.004 Sum_probs=51.2
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
.+...+.+|..||++++..+...+..-.+.. +. + + -...++.=++..+..+..++....+.+++=|.+.|+
T Consensus 66 p~l~~lt~r~~Rr~lLl~~l~lFi~~n~l~a--lA-----p-~-f~~Ll~aR~~~g~a~G~f~~i~~~~a~~lvpp~~~~ 136 (394)
T COG2814 66 PLLALLTGRLERRRLLLGLLALFIVSNLLSA--LA-----P-S-FAVLLLARALAGLAHGVFWSIAAALAARLVPPGKRG 136 (394)
T ss_pred HHHHHHHcccchHHHHHHHHHHHHHHHHHHH--Hh-----c-c-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccchh
Confidence 3445567888888887663332222111011 10 1 1 111222223333445566788889999999999999
Q ss_pred HHHHHHHHHHhhhccccc
Q psy14099 84 SLLAFCSMIGRIGQVIAP 101 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~~~~ 101 (224)
+++++....-.++.+++.
T Consensus 137 ~Aiaiv~~G~tlA~v~Gv 154 (394)
T COG2814 137 RALALVFTGLTLATVLGV 154 (394)
T ss_pred hHHHHHHHHHHHHHHHhc
Confidence 999997766555554443
No 153
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=93.38 E-value=0.52 Score=41.18 Aligned_cols=90 Identities=9% Similarity=-0.081 Sum_probs=50.2
Q ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHHH
Q psy14099 6 CIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSL 85 (224)
Q Consensus 6 ~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g 85 (224)
...+.||.|+|+++..+......... .. .. .+ ..+......++..+.++........|..+. |.+.|+++
T Consensus 260 ~~~l~~r~g~~~~l~~~~~~~~~~~~-~~-~~------~~-~~~~~~~~q~l~g~~~~~~~~~~~~~i~~~-~~~~~~~~ 329 (382)
T TIGR00902 260 SNKLFQNCSARDLLLISAIACVGRWA-II-GA------IE-AFPLIFLLQILHCGTFAVCHLAAMRYIAAQ-PGSEIAKL 329 (382)
T ss_pred hHHHHhhCCHHHHHHHHHHHHHHHHH-HH-Hh------Hh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhC-CHhhHHHH
Confidence 33455777777766554333332222 11 01 11 223334444555555555666667788888 99999999
Q ss_pred HHHHHH-HHhhhcccccceee
Q psy14099 86 LAFCSM-IGRIGQVIAPQVFL 105 (224)
Q Consensus 86 ~g~~~~-~~~~~~~~~~~~~~ 105 (224)
.++.+. ...+|..++|.+..
T Consensus 330 q~~~~~~~~g~g~~~g~~~~G 350 (382)
T TIGR00902 330 QALYNALAMGGLIAIFTAFAG 350 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHHH
Confidence 998654 33455656665443
No 154
>PRK11102 bicyclomycin/multidrug efflux system; Provisional
Probab=93.31 E-value=0.4 Score=41.34 Aligned_cols=34 Identities=15% Similarity=0.285 Sum_probs=21.7
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHHh-hhcccccc
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIGR-IGQVIAPQ 102 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~~-~~~~~~~~ 102 (224)
....+..|.+| +.|+++.++.+.... +++..+++
T Consensus 307 ~~~~~~~~~~~-~~~g~~~~~~~~~~~~~g~~~g~~ 341 (377)
T PRK11102 307 NAMAVILDEFP-HMAGTASSLAGTLRFGIGAIVGAL 341 (377)
T ss_pred HHHHHHhcccc-ccchHHHHHHHHHHHHHHHHHHHH
Confidence 34456678888 788888888655432 44444444
No 155
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=92.96 E-value=0.038 Score=52.16 Aligned_cols=42 Identities=7% Similarity=-0.006 Sum_probs=34.9
Q ss_pred hhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 65 AYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 65 ~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.+.....|..|.+|.+.|+..+|+......+|..+++.+...
T Consensus 189 ~~~~~~~~i~d~~~~~~~~~~~~i~~~~~~iG~~lG~llgg~ 230 (633)
T TIGR00805 189 IFPLGISYIDDFAKSKNSPLYIGILESIAVFGPAFGYLLGSF 230 (633)
T ss_pred chhcCchhhhccCCccccHHHHHHHHHHHHhhhHHHHHHHHH
Confidence 344567999999999999999999998888888888776543
No 156
>TIGR00896 CynX cyanate transporter. This family of proteins is involved in active transport of cyanate. The cyanate transporter in E.Coli is used to transport cyanate into the cell so it can be metabolized into ammonia and bicarbonate. This process is used to overcome the toxicity of environmental cyanate.
Probab=92.59 E-value=0.52 Score=40.46 Aligned_cols=48 Identities=15% Similarity=0.094 Sum_probs=31.7
Q ss_pred HHHHHHhhhhHhhhcc-cccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 59 ITGITSAYTVLYVNTV-DMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 59 ~~~~~~~~~~~~~~~~-ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.++.+..+........ +..|.+.|++..++.+..+.+++.++|.+...
T Consensus 296 g~~~g~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~gp~~~G~ 344 (355)
T TIGR00896 296 GLGQGGAFPLALTLIGLRSRQAAQAAALSAMAQSIGYLLAALGPLFVGV 344 (355)
T ss_pred HHhhhhHhHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444444444444 44557788899999888888888888876643
No 157
>PRK09669 putative symporter YagG; Provisional
Probab=92.47 E-value=0.38 Score=42.94 Aligned_cols=42 Identities=17% Similarity=0.077 Sum_probs=27.5
Q ss_pred HHHHhhhhHhhhccccc-chHHHHHHHHHHHHHHhhhcccccc
Q psy14099 61 GITSAYTVLYVNTVDMF-PTPLRQSLLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 61 ~~~~~~~~~~~~~~Elf-Pt~vR~~g~g~~~~~~~~~~~~~~~ 102 (224)
+++....+.....+|+. +.+-|.+..++....+.+|+.+++.
T Consensus 122 ~~t~~~ip~~al~~~~t~~~~eR~~l~~~r~~~~~~G~~i~~~ 164 (444)
T PRK09669 122 VYTAINVPYCAMPGAITNDPRERHSLQSWRFALSFIGGLIVSV 164 (444)
T ss_pred HHHhhcchHHHhHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34443345568889988 4577888777777666666665554
No 158
>KOG3764|consensus
Probab=92.32 E-value=0.49 Score=42.23 Aligned_cols=90 Identities=13% Similarity=0.005 Sum_probs=55.0
Q ss_pred HHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHH-HHHH
Q psy14099 7 IWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL-RQSL 85 (224)
Q Consensus 7 ~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v-R~~g 85 (224)
..+.||+|+|..+++++..+...-. ++. + .+... ...+.=.+-.+..+..........+..||.+. |++.
T Consensus 127 G~l~~~iGy~ipm~~Gl~vmf~sTi-lFa-f------g~sy~-~l~vAR~LQgvgsA~~~tsglamlAd~f~~d~er~~v 197 (464)
T KOG3764|consen 127 GNLIDRIGYKIPMVAGLFVMFLSTI-LFA-F------GNSYP-MLFVARSLQGVGSAFADTSGLAMLADVFPEDNERGSV 197 (464)
T ss_pred hhhHHHhccccHHHHHHHHHHHHHH-HHH-H------cchhH-HHHHHHHHhhhhHHHHHhhhHHHHHHHcccchhhhHH
Confidence 3456799999988876655443322 221 1 22222 11111122223334445566788999999987 6999
Q ss_pred HHHHHHHHhhhcccccceee
Q psy14099 86 LAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 86 ~g~~~~~~~~~~~~~~~~~~ 105 (224)
+|....+..+|-.++|-+-.
T Consensus 198 mGialgfislG~lvgPpfGG 217 (464)
T KOG3764|consen 198 MGIALGFISLGVLVGPPFGG 217 (464)
T ss_pred HHHHHHHHhccceecCCccc
Confidence 99998888888888776443
No 159
>PRK03633 putative MFS family transporter protein; Provisional
Probab=92.30 E-value=0.98 Score=39.30 Aligned_cols=42 Identities=10% Similarity=0.103 Sum_probs=30.2
Q ss_pred hhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 65 AYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 65 ~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.+.....+..|..|.+.++...+..+....+|+.++|.+...
T Consensus 302 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~igp~~~G~ 343 (381)
T PRK03633 302 LYPVAMAWACEKVEHHELVAMNQALLLSYTVGSLLGPSFTAM 343 (381)
T ss_pred HHHHHHHHHHccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344566778899998877776776666667888888876654
No 160
>PRK09669 putative symporter YagG; Provisional
Probab=92.23 E-value=0.59 Score=41.75 Aligned_cols=93 Identities=13% Similarity=0.047 Sum_probs=48.8
Q ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchH-----
Q psy14099 6 CIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTP----- 80 (224)
Q Consensus 6 ~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~----- 80 (224)
...+.||.|||..+..+..........++ +. + + +..+...+..++..+..+......+...+|..+-.
T Consensus 284 ~~~l~~r~gk~~~~~~~~~~~~~~~~~~~--~~---~-~-~~~~~~~~~~~i~g~~~~~~~~~~~am~ad~~d~~e~~~G 356 (444)
T PRK09669 284 SERLLGKFDRVRAFKWTIVAFVILSALIF--FI---P-P-SNVWLIFALNILFNFIQNLTTPLQWSMFSDVVDYEEKRSG 356 (444)
T ss_pred HHHHHHHhChHHHHHHHHHHHHHHHHHHH--Hh---C-c-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhhhcC
Confidence 34566777887765553332221111011 11 1 1 22333333444445555566667888888887632
Q ss_pred HH--HHHHHHHHHHHhhhcccccceee
Q psy14099 81 LR--QSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 81 vR--~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
.| +...|+.+.+..+|..++|.+..
T Consensus 357 ~r~~g~~~s~~~~~~klg~alg~~i~g 383 (444)
T PRK09669 357 RRLDGLVFSTNLFAIKLGLAIGGAVVG 383 (444)
T ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHH
Confidence 23 34456666666777777776554
No 161
>TIGR00894 2A0114euk Na(+)-dependent inorganic phosphate cotransporter.
Probab=92.20 E-value=0.57 Score=41.99 Aligned_cols=49 Identities=16% Similarity=0.220 Sum_probs=35.6
Q ss_pred HHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 57 IGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
++.++........+....|..|. .+++..|+.+..+.+++.++|++...
T Consensus 370 l~~~~~~~~~~~~~~~~~~~~~~-~~g~~~g~~~~~~~l~~~i~p~l~g~ 418 (465)
T TIGR00894 370 LANAVSSGPLAGVLINSLDLAPR-FLGFIKGITGLPGFIGGLIASTLAGN 418 (465)
T ss_pred HHHHHhhhhhhhhhhchhhcChh-HHHHHHHHHHHHHHHHHHHHHHhhhe
Confidence 33333333444455666777776 89999999999999999999987654
No 162
>KOG1330|consensus
Probab=92.07 E-value=0.12 Score=46.72 Aligned_cols=93 Identities=16% Similarity=0.005 Sum_probs=57.2
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
.-++.++.||..||.++..++..-.++.. ...+ ...-|..++.=.+..++-+....+.....+..||-..|
T Consensus 85 sPl~gyLadryNR~~v~~vG~~iW~~Av~--~~~f-------s~~Fwq~~l~R~~vGiGeAs~~~ia~s~IaD~f~~~~R 155 (493)
T KOG1330|consen 85 SPLFGYLADRYNRKRVIAVGIFIWTLAVF--ASGF-------SNHFWQVLLCRGFVGIGEASYSPIAPSLIADSFPDDKR 155 (493)
T ss_pred HHHHHHHHhhcCcceEEeeHHHHHHHHHH--HHHH-------HHHHHHHHHHHHHhccchhhhcccchhHhhhcCcchhh
Confidence 34567778899999887665443332211 1111 11223333332222233334445678999999999999
Q ss_pred HHHHHHHHHHHhhhccccccee
Q psy14099 83 QSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 83 ~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
++++++-+...-+|+.++-.+.
T Consensus 156 s~~~~ify~~ipvGsglG~vvg 177 (493)
T KOG1330|consen 156 SRVLGIFYFAIPVGSGLGYVVG 177 (493)
T ss_pred hHHHHHhhhhcccccceeEEee
Confidence 9999999998888877665443
No 163
>PRK15011 sugar efflux transporter B; Provisional
Probab=92.00 E-value=0.7 Score=40.52 Aligned_cols=38 Identities=13% Similarity=0.170 Sum_probs=21.8
Q ss_pred hHhhhcccccchHHHHHH--HHHHHHHHhhhcccccceee
Q psy14099 68 VLYVNTVDMFPTPLRQSL--LAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g--~g~~~~~~~~~~~~~~~~~~ 105 (224)
....+.+|..|.+-|..+ .++......+|..++|.+..
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~~g~~i~~ 164 (393)
T PRK15011 125 QMFALAREHADKTGREAVMFSSFLRAQVSLAWVIGPPLAY 164 (393)
T ss_pred HHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 345566676665545332 25555566667777776554
No 164
>PRK11462 putative transporter; Provisional
Probab=91.40 E-value=0.88 Score=41.13 Aligned_cols=47 Identities=11% Similarity=-0.005 Sum_probs=33.9
Q ss_pred HHHHHHHHhhhhHhhhcccccc-hHHHHHHHHHHHHHHhhhcccccce
Q psy14099 57 IGITGITSAYTVLYVNTVDMFP-TPLRQSLLAFCSMIGRIGQVIAPQV 103 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfP-t~vR~~g~g~~~~~~~~~~~~~~~~ 103 (224)
+...+++....+.....+|+-+ .+-|++..++-...+.+|+.+++.+
T Consensus 118 ~~~~~~t~~~ipy~al~~~lt~d~~eRt~l~s~r~~~~~iG~~~~~~~ 165 (460)
T PRK11462 118 LLTLLYTVVNIPYCALGGVITNDPTQRISLQSWRFVLATAGGMLSTVL 165 (460)
T ss_pred HHHHHHHHHhccHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455555567788889888 6889999998888888777666554
No 165
>PRK10429 melibiose:sodium symporter; Provisional
Probab=91.06 E-value=0.77 Score=41.52 Aligned_cols=42 Identities=7% Similarity=0.066 Sum_probs=26.8
Q ss_pred HHHHHHhhhhHhhhccccc-chHHHHHHHHHHHHHHhhhcccc
Q psy14099 59 ITGITSAYTVLYVNTVDMF-PTPLRQSLLAFCSMIGRIGQVIA 100 (224)
Q Consensus 59 ~~~~~~~~~~~~~~~~Elf-Pt~vR~~g~g~~~~~~~~~~~~~ 100 (224)
..+++....+.....+|+- ..+-|.+..++....+.+|+.+.
T Consensus 117 ~~~~t~~~ip~~al~~~lt~~~~eR~~l~~~~~~~~~ig~~~~ 159 (473)
T PRK10429 117 GMTYTIMDIPFWSLVPTLTLDKREREQLVPYPRFFASLAGFVT 159 (473)
T ss_pred HHHHHHHcchHHhhhHHhCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444455678889988 47889887777555555554443
No 166
>PRK10054 putative transporter; Provisional
Probab=90.80 E-value=0.92 Score=39.93 Aligned_cols=39 Identities=23% Similarity=0.313 Sum_probs=29.7
Q ss_pred hhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 67 TVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.....+..+.-|++.|++..+..+ .+.+|..++|.+...
T Consensus 317 p~~~~~~~~~~p~~~~~~~~~~~~-~~~~G~~~Gp~~~G~ 355 (395)
T PRK10054 317 PGEYMLIDHIAPPGMKASYFSAQS-LGWLGAAINPLVSGV 355 (395)
T ss_pred hhHHHHHHHhCCcccceehHhHHH-HHHHHHHHHHHHHHH
Confidence 345678889999999999888643 667888888876644
No 167
>KOG2532|consensus
Probab=90.62 E-value=1.2 Score=40.50 Aligned_cols=40 Identities=13% Similarity=0.166 Sum_probs=30.5
Q ss_pred HHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcc
Q psy14099 59 ITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQV 98 (224)
Q Consensus 59 ~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~ 98 (224)
.+..+..+..+....+.-.|..-|++..++.+....+|.+
T Consensus 139 Gl~~g~~~pa~~~i~~~W~P~~Ers~~~ail~~g~q~g~v 178 (466)
T KOG2532|consen 139 GLGQGVLFPAIGSILAKWAPPNERSTFIAILTAGSQLGTI 178 (466)
T ss_pred HHHHhHHHhhhhceeeeECCHHHHHHHHHHHHHHHHHHHH
Confidence 3445566677889999999999999999987665544444
No 168
>PF13347 MFS_2: MFS/sugar transport protein
Probab=90.47 E-value=0.22 Score=44.26 Aligned_cols=44 Identities=16% Similarity=0.132 Sum_probs=30.5
Q ss_pred HHHHHHhhhhHhhhcccccch-HHHHHHHHHHHHHHhhhcccccc
Q psy14099 59 ITGITSAYTVLYVNTVDMFPT-PLRQSLLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 59 ~~~~~~~~~~~~~~~~ElfPt-~vR~~g~g~~~~~~~~~~~~~~~ 102 (224)
.++++....+..+..+|+-|. +-|.+..+.....+.+|+.+...
T Consensus 114 ~~~~t~~~i~~~al~~~lt~~~~~R~~l~~~~~~~~~~g~~l~~~ 158 (428)
T PF13347_consen 114 DIAYTFVQIPYNALIPELTPDPDERTRLSSWRMIFSMIGSLLASF 158 (428)
T ss_pred HHhhhhccCchhhcCccccccHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 444444444667899999995 67888888877777776654333
No 169
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=90.27 E-value=1.3 Score=40.96 Aligned_cols=43 Identities=12% Similarity=0.047 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHH
Q psy14099 51 RQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIG 93 (224)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~ 93 (224)
..+..++..++............-+.-|.++|++.+++..+..
T Consensus 310 ~~~~l~l~G~~~~~~~~~~~t~~Q~~~P~~~~GRv~si~~~~~ 352 (524)
T PF05977_consen 310 ALIALFLAGAAWIIANSSLNTLVQLSVPDWVRGRVFSIYQMVF 352 (524)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHhHHHHHHHHHH
Confidence 3333344444444455556677889999999999999865444
No 170
>PF03825 Nuc_H_symport: Nucleoside H+ symporter
Probab=89.76 E-value=1.8 Score=38.65 Aligned_cols=48 Identities=13% Similarity=0.009 Sum_probs=34.7
Q ss_pred HHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHH-hhhcccccceee
Q psy14099 58 GITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIG-RIGQVIAPQVFL 105 (224)
Q Consensus 58 ~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~-~~~~~~~~~~~~ 105 (224)
-...++..+.....|..|..|.+.|+++.++.+... -+|+.++.++..
T Consensus 311 hG~tf~~~~~a~~~yi~~~~p~~~~at~Q~l~~~~~~Glg~~iG~~igG 359 (400)
T PF03825_consen 311 HGLTFGLFHAASVRYIDRIAPPELRATAQGLYSALSFGLGGAIGSLIGG 359 (400)
T ss_pred hhHHHHHHHHHHHHHHHHhCCccchHHHHHHHHHHHhhHHHHHHHHHHH
Confidence 444555566677899999999999999999976543 466666555443
No 171
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=89.63 E-value=3.4 Score=36.24 Aligned_cols=23 Identities=9% Similarity=-0.012 Sum_probs=17.1
Q ss_pred HHHhhhhHhhhcccccchHHHHH
Q psy14099 62 ITSAYTVLYVNTVDMFPTPLRQS 84 (224)
Q Consensus 62 ~~~~~~~~~~~~~ElfPt~vR~~ 84 (224)
....+.....+..+.+|.+.++.
T Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~ 343 (402)
T PRK11902 321 TAAFVALLMALCNRSFSATQYAL 343 (402)
T ss_pred HHHHHHHHHHhcCCCCcHHHHHH
Confidence 44445667889999999887765
No 172
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=89.37 E-value=2.6 Score=36.69 Aligned_cols=89 Identities=9% Similarity=-0.053 Sum_probs=42.4
Q ss_pred HHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHHH
Q psy14099 6 CIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSL 85 (224)
Q Consensus 6 ~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g 85 (224)
...+.||.++|..+..++......+. .. .. .+ ..+..++..++..+...........+..+.- ...+++.
T Consensus 260 ~g~l~~r~~~~~~l~~~~~~~~~~~~-~~-~~------~~-~~~~~~~~~~l~g~~~~~~~~~~~~~~~~~~-~~~~~~~ 329 (382)
T PRK11128 260 SNRLFRRWSARDLLLLSAICGVVRWG-LM-GS------TT-ALPWLIVIQILHCGTFTVCHLAAMRYIAARP-GSEVIRL 329 (382)
T ss_pred HHHHHHHCCHHHHHHHHHHHHHHHHH-HH-Hh------hh-hHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-HhhhHHH
Confidence 33556777777765553333222222 11 11 11 2333333344444444444445556777774 4446777
Q ss_pred HHHHHHHH-hhhccccccee
Q psy14099 86 LAFCSMIG-RIGQVIAPQVF 104 (224)
Q Consensus 86 ~g~~~~~~-~~~~~~~~~~~ 104 (224)
.++.+... .+|..++|.+.
T Consensus 330 ~~~~~~~~~~~g~~ig~~i~ 349 (382)
T PRK11128 330 QALYSALAMGGSIAIMTVLS 349 (382)
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 77765333 23334555444
No 173
>PRK10091 MFS transport protein AraJ; Provisional
Probab=89.01 E-value=1.2 Score=38.70 Aligned_cols=33 Identities=9% Similarity=-0.144 Sum_probs=20.3
Q ss_pred hhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 71 VNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 71 ~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
....+.+|.+.++.+. .+....+|+.++|.+..
T Consensus 313 ~~~~~~~~~~~~~~~~--~~~~~~~g~~~Gp~~~G 345 (382)
T PRK10091 313 LLLQNAKGGELLGAAG--GQIAFNLGSAIGAYCGG 345 (382)
T ss_pred HHHHhCCcchHHHHHH--HHHHHHHHHHHHHHHhH
Confidence 3445566666655543 45566778888887664
No 174
>PF05978 UNC-93: Ion channel regulatory protein UNC-93; InterPro: IPR010291 The proteins in this family are represented by UNC-93 from Caenorhabditis elegans. UNC-93 colocalizes with SUP-10 and SUP-9 within muscle cells. Genetic studies suggest that these three proteins forms complex that coordinates muscle contraction. The function of UNC-93 is not known but is most likely an ion channel regulatory protein [].
Probab=88.65 E-value=2.4 Score=32.67 Aligned_cols=81 Identities=9% Similarity=-0.070 Sum_probs=49.0
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
++++..+.++.|.|+.++.+..+-+. ....+ + . ++ .+.......+..+..+..|...-.|..|.-..+.|
T Consensus 54 ~l~~P~iv~~lg~K~sm~lg~~~y~~-y~~~~--~---~--~~--~~~l~~~s~l~G~~~a~lW~aqg~ylt~~s~~~~~ 123 (156)
T PF05978_consen 54 CLFAPSIVNKLGPKWSMILGSLGYAI-YIASF--F---Y--PN--SYTLYPASALLGFGAALLWTAQGTYLTSYSTEETI 123 (156)
T ss_pred HHhHHHHHHHHhhHHHHHHHHHHHHH-HHHHH--H---h--hh--HHHHHHHHHHHhhhhHHhhHhhhHHHHHcCCHHHH
Confidence 45667778999999887764433222 11011 1 1 21 23334444455566777787777888888888888
Q ss_pred HHHHHHHHHHH
Q psy14099 83 QSLLAFCSMIG 93 (224)
Q Consensus 83 ~~g~g~~~~~~ 93 (224)
++-.|+--.+.
T Consensus 124 ~~~~~ifw~i~ 134 (156)
T PF05978_consen 124 GRNTGIFWAIF 134 (156)
T ss_pred hhHHHHHHHHH
Confidence 88777644433
No 175
>PRK11652 emrD multidrug resistance protein D; Provisional
Probab=87.99 E-value=2.2 Score=37.09 Aligned_cols=48 Identities=17% Similarity=0.177 Sum_probs=33.7
Q ss_pred HHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 57 IGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
+..+..+..+.....+..|.+| +.|++..++.+....+|+.+++.+..
T Consensus 308 ~~~~g~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~lg~~~~~~~~~ 355 (394)
T PRK11652 308 LFFFGAGMLFPLATSGAMEPFP-YLAGTAGALLGGLQNIGSGLAALLSA 355 (394)
T ss_pred HHHHHHHHHHHHHHHHHHhhcc-ccchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444455566777789998 57888888888777888888886543
No 176
>PRK10133 L-fucose transporter; Provisional
Probab=87.83 E-value=2.1 Score=38.40 Aligned_cols=92 Identities=12% Similarity=0.066 Sum_probs=49.0
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL 81 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 81 (224)
+.+.+..+.||.+||+.+..+....+..+. +. .+. +. . . ......+..++.+..+...+....|.+|.+
T Consensus 311 G~~~~g~l~~r~g~~~~l~~~~~~~~~~~~-~~-~~~-----~~-~-~-~~~~~~l~glg~~~i~P~~~s~a~~~~~~~- 379 (438)
T PRK10133 311 GRFTGTWLISRFAPHKVLAAYALIAMALCL-IS-AFA-----GG-H-V-GLIALTLCSAFMSIQYPTIFSLGIKNLGQD- 379 (438)
T ss_pred HHHHHHHHHHHcCHHHHHHHHHHHHHHHHH-HH-HHc-----CC-h-H-HHHHHHHHHHHHHHHHHHHHHHHHcccchh-
Confidence 345566777888877665543222221111 11 111 11 1 1 122334445667777888888899999875
Q ss_pred HHHHHHHHHHHHhhhcccccceee
Q psy14099 82 RQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 82 R~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
-+++.++... ..+|+.+.|.+..
T Consensus 380 ~~~as~l~~~-~~~g~~~~~~i~G 402 (438)
T PRK10133 380 TKYGSSFIVM-TIIGGGIVTPVMG 402 (438)
T ss_pred hccchhHHhH-HhccchHHHHHHH
Confidence 4455665543 3356666665443
No 177
>PRK09848 glucuronide transporter; Provisional
Probab=87.79 E-value=2.7 Score=37.48 Aligned_cols=49 Identities=18% Similarity=0.211 Sum_probs=31.1
Q ss_pred HHHHHHHHhhhhHhhhcccccchH-------HHHHHHHHHHHHHhhhcccccceee
Q psy14099 57 IGITGITSAYTVLYVNTVDMFPTP-------LRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfPt~-------vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
+..+.........+...+|.-|.. .++...|+.+....+|..+++.+..
T Consensus 328 l~g~G~~~~~~~~~al~~~~~~~~~~~~g~r~~G~~~~~~~~~~klg~aig~~i~g 383 (448)
T PRK09848 328 IASIGQGVTMTVMWALEADTVEYGEYLTGVRIEGLTYSLFSFTRKCGQAIGGSIPA 383 (448)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhhhHHhhCccchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 333444555556677777776643 3577777777777777777776553
No 178
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=87.73 E-value=0.59 Score=46.93 Aligned_cols=46 Identities=9% Similarity=-0.101 Sum_probs=31.7
Q ss_pred HHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccc
Q psy14099 57 IGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~ 102 (224)
+..++.+........+..|..|.+.|++.+|+.+....++..+++.
T Consensus 343 ~~g~~~~~~~~~~~~~~~~~~p~~~~G~v~g~~~~~~~~~~~ig~~ 388 (1140)
T PRK06814 343 GLAAAGGLYIVPLFAALQAWANPAHRARVIAANNVLNAAFMVAGTI 388 (1140)
T ss_pred HHHHHHHHhHHHHHHHHHhhCCcccceeeeHHHHHHHHHHHHHHHH
Confidence 3334444444567889999999999999999877666554444443
No 179
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=87.58 E-value=0.22 Score=44.54 Aligned_cols=57 Identities=16% Similarity=0.132 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 49 VFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
....++..+-.++.+..+.+..-..+.-||.+-|++-.++-+.+-.+|+.+.|.+..
T Consensus 118 ~~~~~l~~lng~fQg~Gwpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~ 174 (448)
T COG2271 118 FLFAVLWVLNGWFQGMGWPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVAL 174 (448)
T ss_pred HHHHHHHHHHHHHhcCCCcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHH
Confidence 334444455566777788889999999999999999999999999999998888773
No 180
>PRK11462 putative transporter; Provisional
Probab=87.35 E-value=2 Score=38.82 Aligned_cols=38 Identities=13% Similarity=0.274 Sum_probs=20.9
Q ss_pred hhHhhhcccccc-----hHHHHHHHHHHH--HHHhhhccccccee
Q psy14099 67 TVLYVNTVDMFP-----TPLRQSLLAFCS--MIGRIGQVIAPQVF 104 (224)
Q Consensus 67 ~~~~~~~~ElfP-----t~vR~~g~g~~~--~~~~~~~~~~~~~~ 104 (224)
...+...+|.-. |..|..|+.+.. .+..+|..+++.+.
T Consensus 337 ~l~~~m~ad~~d~~e~~tG~r~~g~~~a~~~f~~Klg~alg~~i~ 381 (460)
T PRK11462 337 PIQWVMMSDTVDYGEWCNGKRLTGISFAGTLFVLKLGLAFGGALI 381 (460)
T ss_pred HHHHHHHHHhHhhhHHhcCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 334555554433 567877775543 55566665555443
No 181
>PRK15402 multidrug efflux system translocase MdfA; Provisional
Probab=87.23 E-value=3.6 Score=35.96 Aligned_cols=27 Identities=7% Similarity=-0.025 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 80 PLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 80 ~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+.|++..++.+....++..+++.+...
T Consensus 340 ~~~g~~~~~~~~~~~~~~~~g~~~~~~ 366 (406)
T PRK15402 340 VSKGTVSAAMGMLSMLIFTVGIELSKH 366 (406)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 788898888877777777666655543
No 182
>KOG1330|consensus
Probab=86.88 E-value=2.2 Score=38.84 Aligned_cols=59 Identities=19% Similarity=0.279 Sum_probs=41.0
Q ss_pred hHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHH-hhhcccccceeeh
Q psy14099 48 VVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIG-RIGQVIAPQVFLL 106 (224)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~-~~~~~~~~~~~~~ 106 (224)
.+..+++++++.......+++.--...|+-|.+.|.++.++-..+. -+|...+|++...
T Consensus 349 ~~~~~il~~~g~~~~~~~~a~n~~i~l~vV~p~~Rt~a~a~~~~~~h~fgd~~~p~ivGi 408 (493)
T KOG1330|consen 349 MIFGLILFLVGETISWFNWATNNPIFLEVVPPSRRTTAYALDTVFEHIFGDAASPYIVGI 408 (493)
T ss_pred HHHHHHHHHHHHHHHhcccccccceeeEecCcccccHHHHHHHHHHHHhccCCCcceehh
Confidence 3444555555555555566666777889999999999999966555 5566677866654
No 183
>KOG2504|consensus
Probab=86.78 E-value=1.4 Score=40.65 Aligned_cols=53 Identities=19% Similarity=0.142 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 51 RQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
.+...++..++.+..+.+.-+.+. .|..+-|+.+.|++....-+|.++-|.+.
T Consensus 138 ~lt~gvi~G~G~~~~~~paiviv~-~YF~kkR~lA~Gia~~GsG~G~~~~~~l~ 190 (509)
T KOG2504|consen 138 YLTFGVIGGLGLGLIYLPAVVILG-TYFEKKRALATGIAVSGTGVGTVVFPPLL 190 (509)
T ss_pred HHHHHHHhhccchhhhcchhhhhh-hHhHHHHHHHHhhhhccCCcceeeHHHHH
Confidence 333444555555666666666666 55568899999998887777777666544
No 184
>TIGR00882 2A0105 oligosaccharide:H+ symporter.
Probab=86.65 E-value=1.4 Score=38.53 Aligned_cols=17 Identities=6% Similarity=-0.080 Sum_probs=9.6
Q ss_pred hHHHHhcccchHHHHHH
Q psy14099 5 VCIWMDHVVFRQTLFLI 21 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~ 21 (224)
....+.||.|||+.++.
T Consensus 57 ~~G~l~Dr~grr~~~~~ 73 (396)
T TIGR00882 57 LFGLISDKLGLKKHLLW 73 (396)
T ss_pred HHHHHHHHhCcHHHHHH
Confidence 34455666666665543
No 185
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=86.59 E-value=2.6 Score=35.20 Aligned_cols=92 Identities=16% Similarity=0.133 Sum_probs=43.5
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQ 83 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~ 83 (224)
+.+.++.|+.|-|..++++..........++.......+ ....+......+++........+....-..+-||. -|+
T Consensus 54 ~~~G~l~d~~gp~~~l~iG~~~~~~GY~~~~l~~~~~i~--~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~-~RG 130 (250)
T PF06813_consen 54 ILAGLLYDRFGPWVVLLIGAVLGFVGYGLLWLAVSGRIP--SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPR-SRG 130 (250)
T ss_pred HHHHHHHHhcchHHHHHHHHHHHHHHHHHHHHHHhCccC--ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCcc-ccC
Confidence 344556677776665555333222222212211111111 11223333233333222222334455666799995 699
Q ss_pred HHHHHHHHHHhhhcc
Q psy14099 84 SLLAFCSMIGRIGQV 98 (224)
Q Consensus 84 ~g~g~~~~~~~~~~~ 98 (224)
+.+|+.-....+++.
T Consensus 131 ~vvgilk~~~GLSaa 145 (250)
T PF06813_consen 131 TVVGILKGFFGLSAA 145 (250)
T ss_pred ceehhhhHHHHhHHH
Confidence 999987655555544
No 186
>PRK09528 lacY galactoside permease; Reviewed
Probab=86.26 E-value=1.1 Score=39.56 Aligned_cols=24 Identities=21% Similarity=0.193 Sum_probs=18.1
Q ss_pred hHHHHHHHHhhhhccceeeeccCC
Q psy14099 201 TIVGSIDGLGALLGSPFCAFISDK 224 (224)
Q Consensus 201 ~~~~s~~~~G~~~G~~~~G~lsDr 224 (224)
....+++.++..+|.++.|.++||
T Consensus 265 g~~~~~~~~~~~~~~~~~g~l~dr 288 (420)
T PRK09528 265 GYLNSFQVFLEALIMFFAPFIINR 288 (420)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566667777888888888887
No 187
>PF13347 MFS_2: MFS/sugar transport protein
Probab=84.84 E-value=1.1 Score=39.77 Aligned_cols=94 Identities=14% Similarity=0.202 Sum_probs=53.5
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchH----
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTP---- 80 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~---- 80 (224)
+...+.||.|||+.+..+....+....... +. +.+..+...+...+..++.+..+...+...+|+-+..
T Consensus 279 ~~~~l~~r~gk~~~~~~~~~~~~~~~~~~~--~~-----~~~~~~~~~i~~~l~gi~~~~~~~~~~a~~ad~id~~e~~t 351 (428)
T PF13347_consen 279 LWGRLSKRFGKKKVYIIGLLLAALGFLLLF--FL-----GPGSPWLVLILFILAGIGYGAFFVIPWAMLADVIDYDEWKT 351 (428)
T ss_pred HHHHHHHHccceeehhhhHHHHHHHHHHHH--HH-----HhhhHHHHHHHHHHhHhhhcccccccccccccchhhHHHhc
Confidence 345667888888876553333222222111 11 1122334445555555666666677889999998843
Q ss_pred -HH--HHHHHHHHHHHhhhcccccceee
Q psy14099 81 -LR--QSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 81 -vR--~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
.| +.-.|+.+...+++..+++.+..
T Consensus 352 g~r~~g~~~s~~~~~~k~~~~la~~i~g 379 (428)
T PF13347_consen 352 GRRREGMYFSVNSFFIKIGQGLAGAIVG 379 (428)
T ss_pred CCCchHHHHHhhhhhhHHHHHHHHHHHH
Confidence 23 45555566666777777776554
No 188
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=84.68 E-value=3.6 Score=36.76 Aligned_cols=98 Identities=11% Similarity=0.042 Sum_probs=59.8
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchh-HHHHHHHHHHHHHHHHhhhhHhhhcccccchH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHV-VFRQTLFLIGITGITSAYTVLYVNTVDMFPTP 80 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 80 (224)
+.+.+.++.+|.|+|.-++.++...++... ++. |-++... ...++..++...+.+.-.+....|.+-+.|.+
T Consensus 64 ~~lpa~~~~kk~gyk~gi~lgL~l~avg~~-lF~------pAa~~~~y~~FL~~lFila~Gi~~LetaaNp~v~~lg~~~ 136 (422)
T COG0738 64 MSLPAGLLIKKLGYKAGIVLGLLLYAVGAA-LFW------PAASSKSYGFFLVALFILASGIGLLETAANPYVTLLGKPE 136 (422)
T ss_pred HhccHHHHHHHhhhHHHHHHHHHHHHHHHH-HHh------hhhhhhhHHHHHHHHHHHHhhhHHHHhccchHHHHhCCch
Confidence 345677888999999877765554443332 221 1111111 12222222222333334455678888999997
Q ss_pred HHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 81 LRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 81 vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
--+.=+.+...+..+|+.++|.+...
T Consensus 137 ~a~~rlnl~q~fn~lGa~~gp~~g~~ 162 (422)
T COG0738 137 SAAFRLNLAQAFNGLGAILGPLLGSS 162 (422)
T ss_pred hHHHHHHHHHHhhhhHHHHHHHHHHH
Confidence 77777888899999999999987654
No 189
>PRK10213 nepI ribonucleoside transporter; Reviewed
Probab=82.06 E-value=6.6 Score=34.47 Aligned_cols=44 Identities=0% Similarity=-0.152 Sum_probs=20.8
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+...........+..+..|.+ +++..+.......+|..++|.+.
T Consensus 317 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~lg~~~G~~l~ 360 (394)
T PRK10213 317 LTFALVPVGWSTWITRSLADQ-AEKAGSIQVAVIQLANTCGAAIG 360 (394)
T ss_pred HHHHhhhHHHHHHHHHHCccc-HHHHHHHHHHHHHHHHHHHHHHH
Confidence 333333334444666777744 33333433344445555555444
No 190
>TIGR02718 sider_RhtX_FptX siderophore transporter, RhtX/FptX family. RhtX from Sinorhizobium meliloti 2011 and FptX from Pseudomonas aeruginosa appear to be single polypeptide transporters, from the major facilitator family (see pfam07690) for import of siderophores as a means to import iron. This function was suggested by proximity to siderophore biosynthesis genes and then confirmed by study of knockout and heterologous expression phenotypes.
Probab=82.02 E-value=7.5 Score=33.78 Aligned_cols=34 Identities=12% Similarity=-0.229 Sum_probs=22.2
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHHhhhccccc
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAP 101 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~ 101 (224)
..-.+..|..+.+.|+.+.+.......+|..+++
T Consensus 117 ~~d~~~~~~~~~~~~~~~~~~~~~g~~lG~~~g~ 150 (390)
T TIGR02718 117 ATDGMAAEHFNGRTLAKGNAVQIAGVMIGFFGGG 150 (390)
T ss_pred HHHHHHHHhCCHhhhhHHHHHHHHHHHHHHHHHH
Confidence 4556788999888887766555444455555444
No 191
>PRK10473 multidrug efflux system protein MdtL; Provisional
Probab=81.46 E-value=5.8 Score=34.46 Aligned_cols=19 Identities=16% Similarity=0.121 Sum_probs=12.6
Q ss_pred hhHHHHhcccchHHHHHHH
Q psy14099 4 IVCIWMDHVVFRQTLFLIG 22 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~ 22 (224)
+....+.||.|||+.+..+
T Consensus 257 ~~~~~l~~r~g~~~~~~~~ 275 (392)
T PRK10473 257 FSTPFALGIFKPRTLMLTS 275 (392)
T ss_pred HHHHHHHHhcCHHHHHHHH
Confidence 4455667888888776553
No 192
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=81.04 E-value=4.2 Score=37.13 Aligned_cols=93 Identities=22% Similarity=0.356 Sum_probs=52.0
Q ss_pred hhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccc-----cc
Q psy14099 4 IVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDM-----FP 78 (224)
Q Consensus 4 l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~El-----fP 78 (224)
++...+.+|.|||++...+....++....++ +. +.+...+.++..++..+..+..+...|+..+|+ +-
T Consensus 290 ~~~p~L~~~~gkk~~~~~~~~~~~i~~~~~~--f~-----~~~~~~l~~~~~~i~~~g~~~~~~l~wam~~d~vDyge~~ 362 (467)
T COG2211 290 ILWPRLVKKFGKKKLFLIGLLLLAVGYLLLY--FT-----PAGSVVLIVVALIIAGVGTGIANPLPWAMVADTVDYGEWK 362 (467)
T ss_pred HhHHHHHHHhchHHHHHHHHHHHHHHHHHHH--hh-----cCcchHHHHHHHHHHHHHhhccccccHHHhcchhhHHHHH
Confidence 3445667889999887664332222222111 11 222334444444566666777777788888876 45
Q ss_pred hHHHHHHHHHH--HHHHhhhcccccce
Q psy14099 79 TPLRQSLLAFC--SMIGRIGQVIAPQV 103 (224)
Q Consensus 79 t~vR~~g~g~~--~~~~~~~~~~~~~~ 103 (224)
|.+|..|+..+ ..+..+|..++.++
T Consensus 363 TG~R~eGi~~s~~tF~~K~g~ala~~~ 389 (467)
T COG2211 363 TGVRREGIVYSGMTFFRKLGLALAGFI 389 (467)
T ss_pred hCCCchhhHHHHHHHHHHHHHHHHHHH
Confidence 67787776654 44444544444433
No 193
>PF01306 LacY_symp: LacY proton/sugar symporter; InterPro: IPR022814 In bacteria there are a number of families of transport proteins, including symporters and antiporters, that mediate the intake of a variety of sugars with the concomitant uptake of hydrogen ions (proton symporters) []. The lacY family of Escherichia coli and Klebsiella pneumoniae are proton/beta-galactoside symporters, which, like most sugar transporters, are integral membrane proteins with 12 predicted transmembrane (TM) regions. Also similar to the lacY family are the rafinose (rafB) and sucrose (cscB) permeases from E. coli []. This entry also includes bacterial phenylproprionate permease.; PDB: 1PV7_B 1PV6_A 2Y5Y_B 2CFQ_A 2V8N_B 2CFP_A.
Probab=78.29 E-value=12 Score=33.59 Aligned_cols=79 Identities=9% Similarity=0.027 Sum_probs=43.8
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHHHH
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQS 84 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~ 84 (224)
.+..+.+|+|-|..++.+..++++=.. ...+ .+ ..+...+.-++..+-+....-...-|.++.||+++.+|
T Consensus 278 ~~p~li~rig~k~~Lllag~i~~iRi~--~~~~------~~-~~~~i~~~klLH~~e~~l~lva~fkYI~~~fd~rlsAt 348 (412)
T PF01306_consen 278 FSPWLINRIGAKNLLLLAGVIMAIRII--GSGF------AT-NPWVISLIKLLHALEFPLLLVAAFKYITAHFDKRLSAT 348 (412)
T ss_dssp HHHHHHHHH-HHHHHHHHHHHHHHHHH--HHHT---------SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGHHH
T ss_pred HHHHHHHhcChHhHHHHHHHHHHHHHH--HHhh------hc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHhHHHH
Confidence 345566777766665543333333222 1111 11 23344445555555445555567889999999999999
Q ss_pred HHHHHHHH
Q psy14099 85 LLAFCSMI 92 (224)
Q Consensus 85 g~g~~~~~ 92 (224)
...++...
T Consensus 349 ~y~v~~~~ 356 (412)
T PF01306_consen 349 LYLVGFQF 356 (412)
T ss_dssp HHHHHHTT
T ss_pred HHHHHHHH
Confidence 88776543
No 194
>COG0477 ProP Permeases of the major facilitator superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / Inorganic ion transport and metabolism / General function prediction only]
Probab=78.22 E-value=17 Score=28.82 Aligned_cols=41 Identities=17% Similarity=0.276 Sum_probs=28.2
Q ss_pred HHHhhhhHhhhcccccch-HHHHHHHHHHHH-HHhhhcccccc
Q psy14099 62 ITSAYTVLYVNTVDMFPT-PLRQSLLAFCSM-IGRIGQVIAPQ 102 (224)
Q Consensus 62 ~~~~~~~~~~~~~ElfPt-~vR~~g~g~~~~-~~~~~~~~~~~ 102 (224)
.+........+.+|.+|. ..|+...+.... ...++..++|.
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (338)
T COG0477 108 GGGLLPVASALLSEWFPEATERGLAVGLVTLGAGALGLALGPL 150 (338)
T ss_pred hHHHHHHHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 334445678999999998 667777777666 45566666663
No 195
>PRK11195 lysophospholipid transporter LplT; Provisional
Probab=77.60 E-value=5.3 Score=35.06 Aligned_cols=40 Identities=3% Similarity=-0.076 Sum_probs=26.9
Q ss_pred hhhHhhhcccccchHH-HHHHHHHHHHHHhhhcccccceee
Q psy14099 66 YTVLYVNTVDMFPTPL-RQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 66 ~~~~~~~~~ElfPt~v-R~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
.........|.-|.+. |+++.++.+....++..++..+..
T Consensus 311 ~~~~~~~~q~~~~~~~~~g~~~a~~~~~~~~~~~~~~~~~~ 351 (393)
T PRK11195 311 VVPMNALLQHRGHVLVGAGHSIAVQNFNENLAMLLMLGLYS 351 (393)
T ss_pred hhhHHHHHHhhCcccccchhHHHHHhHHHHHHHHHHHHHHH
Confidence 3344555567766655 788988888888777766665544
No 196
>TIGR00926 2A1704 Peptide:H+ symporter (also transports b-lactam antibiotics, the antitumor agent, bestatin, and various protease inhibitors).
Probab=77.34 E-value=8 Score=36.90 Aligned_cols=40 Identities=18% Similarity=0.254 Sum_probs=30.4
Q ss_pred hhHhhhcccccch---HHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 67 TVLYVNTVDMFPT---PLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 67 ~~~~~~~~ElfPt---~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
+..-+...+.|+. +.|.++..+.++.+.+|+.+++.+...
T Consensus 104 p~vsaf~gdqf~~~~~~~~~s~F~~fY~~iNiGSlis~~i~~~ 146 (654)
T TIGR00926 104 PCVSAFGGDQFEERQLSLRSRFFSFFYFAINAGSLISTIITPI 146 (654)
T ss_pred cCchhhhHhhcCccchhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456777888874 347888999999999999888776654
No 197
>KOG2816|consensus
Probab=76.63 E-value=6 Score=36.08 Aligned_cols=44 Identities=20% Similarity=0.200 Sum_probs=34.5
Q ss_pred HHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 62 ITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 62 ~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
+...++....|.+.+=.++.|....|+.+..-..+..++|.+..
T Consensus 126 ~~~~~s~~~a~vadis~~~~R~~~~gll~~~~~~~~~~~p~~~~ 169 (463)
T KOG2816|consen 126 FSAIFSVGFAYVADISSEEERSSSIGLLSGTFGAGLVIGPALGG 169 (463)
T ss_pred hhhhhhhhhhheeeccchhHHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 44556678899999999999999999998866666666665443
No 198
>COG3104 PTR2 Dipeptide/tripeptide permease [Amino acid transport and metabolism]
Probab=74.64 E-value=0.76 Score=41.96 Aligned_cols=94 Identities=19% Similarity=0.101 Sum_probs=51.5
Q ss_pred hHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhh-hhHhhhcccccchHH--
Q psy14099 5 VCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAY-TVLYVNTVDMFPTPL-- 81 (224)
Q Consensus 5 ~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ElfPt~v-- 81 (224)
.+++.|+..|+|+.++.+...+.+-..++.. +...+.....+.+.++. .-++.+ +-.-....|+||.+-
T Consensus 81 GG~laDr~LG~~~tI~lGail~~iGh~~L~~------~~~~~~~gl~i~L~~I~--iG~Gl~K~NiS~llg~ly~~~Dpr 152 (498)
T COG3104 81 GGWLADRVLGTRRTIVLGAILMAIGHLVLAI------SSVSGPGGLYIGLALII--VGTGLFKPNISSLLGELYPKDDPR 152 (498)
T ss_pred HHHHHHHhcchhHHHHHHHHHHHHHHHHHhc------cccccccHHHHHHHHHH--hccccccccHHHHHHHhcCCCCcc
Confidence 4566677788888776543333332221221 10011222233333332 122333 235677888888632
Q ss_pred HHHHHHHHHHHHhhhcccccceeeh
Q psy14099 82 RQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 82 R~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
|-.|.++-++...+|+.++|.+...
T Consensus 153 rD~gFt~fY~~iNiGsl~~p~i~~~ 177 (498)
T COG3104 153 RDGGFTLFYMGINIGSLIAPIITGL 177 (498)
T ss_pred cCCCccEEEEEeehHHHHHHHHHHH
Confidence 6778888888888888888887654
No 199
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=73.79 E-value=2.9 Score=37.94 Aligned_cols=50 Identities=14% Similarity=0.168 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
.+..+.....+.+...+..|+-|.+.+++..++...+..+|..+++.+..
T Consensus 359 ~l~~~~~g~~~~~~~~~~~~~~p~~~egt~~al~~s~~~lg~~v~~~~gg 408 (468)
T TIGR00788 359 IIAEVLAQLKFMPFLVLLARLCPSGCESSVFALLASILHLGSSVSGFLGV 408 (468)
T ss_pred HHHHHHHHHHHccHHHHHHHhCCCCceehHHHHHHHHHHHHHHHHHHHHH
Confidence 34445555566678899999999999999999999988999888886443
No 200
>TIGR00924 yjdL_sub1_fam amino acid/peptide transporter (Peptide:H+ symporter), bacterial. The model describes proton-dependent oligopeptide transporters in bacteria. This model is restricted in its range in recognizing bacterial proton-dependent oligopeptide transporters, although they are found in yeast, plants and animals. They function by proton symport in a 1:1 stoichiometry, which is variable in different species. All of them are predicted to contain 12 transmembrane domains, for which limited experimental evidence exists.
Probab=72.70 E-value=24 Score=32.05 Aligned_cols=46 Identities=11% Similarity=0.077 Sum_probs=35.7
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
+.-.......+.+.+|+-|.+.|++.+|+......+|..+++.+..
T Consensus 393 ~ge~~~~p~~~~~~~~~aP~~~~g~~~g~~~l~~~~g~~l~~~~~~ 438 (475)
T TIGR00924 393 LGELMISPLGLSWWTKIAPQRLMGQMLGMWFLAQAMGSLLGGYLAT 438 (475)
T ss_pred HHHHHHhHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3333444567889999999999999999988888888877776554
No 201
>TIGR00902 2A0127 phenyl proprionate permease family protein. This family of proteins is involved in the uptake of 3-phenylpropionic acid. This uptake mechanism is for the metabolism of phenylpropanoid compounds and plays an important role in the natural degradative cycle of these aromatic molecules.
Probab=70.82 E-value=12 Score=32.58 Aligned_cols=38 Identities=11% Similarity=0.019 Sum_probs=24.1
Q ss_pred hhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 66 YTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 66 ~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
......+..| + .+.|++..|.....+.+|..++|.+..
T Consensus 112 ~p~~~al~~~-~-~~~~~~~~g~~~~~~slG~~~g~~l~g 149 (382)
T TIGR00902 112 MPIGDALANT-W-QKQFGLDYGKVRLIGSAAFIIGSALFG 149 (382)
T ss_pred hhHHHHHHHH-H-HHHcCCCccHHHHHHHHHHHHHHHHHH
Confidence 3334444444 2 466787788887777777777776543
No 202
>PRK11128 putative 3-phenylpropionic acid transporter; Provisional
Probab=70.81 E-value=7.5 Score=33.78 Aligned_cols=35 Identities=11% Similarity=-0.109 Sum_probs=19.8
Q ss_pred HhhhcccccchHHHHHHHHHHHHHHhhhcccccceee
Q psy14099 69 LYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFL 105 (224)
Q Consensus 69 ~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~ 105 (224)
...+..+. .+-|+.+.|.....+.+|..++|.+..
T Consensus 115 ~~a~~~~~--~~~~~~a~~~~~~~~~lg~~igp~lgg 149 (382)
T PRK11128 115 TDALANTW--QKQIGLDYGKVRLWGSIAFVIGSALTG 149 (382)
T ss_pred HHHHHHHH--HhhccCCcchHHHHHHHHHHHHHHHHH
Confidence 33444443 234666666666666666666666554
No 203
>PRK09584 tppB putative tripeptide transporter permease; Reviewed
Probab=69.53 E-value=34 Score=31.25 Aligned_cols=37 Identities=11% Similarity=0.029 Sum_probs=26.6
Q ss_pred hhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccc
Q psy14099 65 AYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAP 101 (224)
Q Consensus 65 ~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~ 101 (224)
.......+..++-|.+.|++.+|+......+|+.++.
T Consensus 399 ~~p~g~s~~~~~aP~~~rg~~~g~~~l~~a~g~~~~g 435 (500)
T PRK09584 399 ISGLGLAMVAQLVPQRLMGFIMGSWFLTTAGAALIAG 435 (500)
T ss_pred HhHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3345677889999999999999987654445554443
No 204
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=68.18 E-value=17 Score=33.22 Aligned_cols=53 Identities=13% Similarity=0.155 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHhhhhHhhhcccccch-HHHHHHHHHHHHHHhhhccccccee
Q psy14099 52 QTLFLIGITGITSAYTVLYVNTVDMFPT-PLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~ElfPt-~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
.+..++...+++...-+..+..+|+=+. +-|.+-.++-...+.+|+.+..++.
T Consensus 116 ~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~l~~~~~ 169 (467)
T COG2211 116 LVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGLLVAVLF 169 (467)
T ss_pred HHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455556666666677888888765 5688888887777777766555444
No 205
>TIGR00769 AAA ADP/ATP carrier protein family. These proteins are members of the ATP:ADP Antiporter (AAA) Family (TC 2.A.12), which consists of nucleotide transporters that have 12 GES predicted transmembrane regions. One protein from Rickettsia prowazekii functions to take up ATP from the eukaryotic cell cytoplasm into the bacterium in exchange for ADP. Five AAA family paralogues are encoded within the genome of R. prowazekii. This organism transports UMP and GMP but not CMP, and it seems likely that one or more of the AAA family paralogues are responsible. The genome of Chlamydia trachomatis encodes two AAA family members, Npt1 and Npt2, which catalyse ATP/ADP exchange and GTP, CTP, ATP and UTP uptake probably employing a proton symport mechanism. Two homologous adenylate translocators of Arabidopsis thaliana are postulated to be localized to the intracellular plastid membrane where they function as ATP importers.
Probab=68.06 E-value=43 Score=30.67 Aligned_cols=47 Identities=2% Similarity=0.011 Sum_probs=37.4
Q ss_pred HHHHHhhh-hHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 60 TGITSAYT-VLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 60 ~~~~~~~~-~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
...+...+ ..|.+.+|++.++--.+-.++....+.+|..+++.+...
T Consensus 140 lw~~~vvS~lFW~fandi~t~~qakRfy~l~~~ganlg~i~sg~~~~~ 187 (472)
T TIGR00769 140 LWGSVVLSLLFWGFANQITTIDEAKRFYALFGLGANVALIFSGRTIKY 187 (472)
T ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33344455 689999999999998999999999999999888876543
No 206
>KOG2504|consensus
Probab=65.19 E-value=38 Score=31.31 Aligned_cols=56 Identities=14% Similarity=0.077 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 51 RQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.+....++.++.+...+.....+.|+.+++-=..+.|+...+..++..++|-+...
T Consensus 391 l~~~~~~fG~~~g~~~~l~~~i~~~~~g~~~l~~a~Gl~l~~~gi~~l~gpPiag~ 446 (509)
T KOG2504|consen 391 LIVFSILFGFCVGSFSSLTPVILVDLVGLEKLSNAYGLLLLFQGIGALVGPPIAGL 446 (509)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcChhhcchHHHHHHHHhHHHHHcCccccee
Confidence 34444444455555555566899999999999999999999999999999987764
No 207
>COG2814 AraJ Arabinose efflux permease [Carbohydrate transport and metabolism]
Probab=64.49 E-value=37 Score=30.34 Aligned_cols=85 Identities=8% Similarity=-0.026 Sum_probs=40.7
Q ss_pred chhhHHHHhcccchHHHHHH-HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLI-GITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTP 80 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~ 80 (224)
|++++..+.||..||.+... .+..+. +..+. +. ++ ..+..++..+++.+.............+|.- .+
T Consensus 263 Gn~~gGrl~dr~~~~~l~~~~~l~a~~--~l~l~--~~-----~~-~~~~~~~~~~~wg~a~~~~~~~~~~~~a~~~-p~ 331 (394)
T COG2814 263 GNLLGGRLADRGPRRALIAALLLLALA--LLALT--FT-----GA-SPALALALLFLWGFAFSPALQGLQTRLARLA-PD 331 (394)
T ss_pred HHHHHhhhccccchhHHHHHHHHHHHH--HHHHH--Hh-----cc-hHHHHHHHHHHHHHHhhhhhhHHHHHhcccC-CC
Confidence 56677777888555554433 222222 11111 11 22 2333333334444444444445566667733 46
Q ss_pred HHHHHHHHHHHHHhhhc
Q psy14099 81 LRQSLLAFCSMIGRIGQ 97 (224)
Q Consensus 81 vR~~g~g~~~~~~~~~~ 97 (224)
-+..+.++....-.+|.
T Consensus 332 ~~~~a~sl~~aa~nlgi 348 (394)
T COG2814 332 AADLAGSLNVAAFNLGI 348 (394)
T ss_pred chHHHHHHHHHHHHHHH
Confidence 77777777554444333
No 208
>COG2270 Permeases of the major facilitator superfamily [General function prediction only]
Probab=63.01 E-value=8.3 Score=34.74 Aligned_cols=92 Identities=15% Similarity=0.175 Sum_probs=43.9
Q ss_pred hhhHHHHhcccchHHHHHH-HHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLI-GITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL 81 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 81 (224)
-+++...|..+.||+.+-. ...+.+..+. +. +. ++. ...+..+++..+....+..+......+.+.+.+.+-
T Consensus 76 piLG~iaD~~g~Rk~~~~~f~~i~i~~~~~-L~--~i---~~~-s~~~~~l~~~il~~i~~~~s~Vfyds~L~~~~~k~~ 148 (438)
T COG2270 76 PILGTIADYPGPRKKFFGFFTAIGIISTFL-LW--FI---PPG-SYLLLLLLFLILASIGFEFSNVFYDSMLPRLTTKDN 148 (438)
T ss_pred HHhhhhhccCCCcchHHHHHHHHHHHHHHH-HH--Hh---CCC-chHHHHHHHHHHHHHhcchhheehhhHhhhhcCccc
Confidence 3556667777878876544 2223322222 11 11 221 222233333333333333333334467777766654
Q ss_pred HHHHHHHHHHHHhhhccccc
Q psy14099 82 RQSLLAFCSMIGRIGQVIAP 101 (224)
Q Consensus 82 R~~g~g~~~~~~~~~~~~~~ 101 (224)
=++..+.....+.+|+.+.-
T Consensus 149 ~~riS~lg~~~gylgs~i~l 168 (438)
T COG2270 149 MGRISGLGWALGYLGSVILL 168 (438)
T ss_pred cCcccccccccccccchHHH
Confidence 45555556666666665443
No 209
>TIGR00788 fbt folate/biopterin transporter. The only functionally characterized members of the family are from protozoa and include FT1, the major folate transporter in Leishmania, and BT1, the Leishmania biopterin/folate transporter. A related protein in Trypanosoma brucei, ESAGIO, shows weak folate/biopterin transport activity.
Probab=62.87 E-value=10 Score=34.29 Aligned_cols=23 Identities=17% Similarity=0.307 Sum_probs=14.5
Q ss_pred hHHHHHHHHhhhhccceeeeccC
Q psy14099 201 TIVGSIDGLGALLGSPFCAFISD 223 (224)
Q Consensus 201 ~~~~s~~~~G~~~G~~~~G~lsD 223 (224)
.+.+++..+|.++|..+.|.+.|
T Consensus 390 al~~s~~~lg~~v~~~~gg~l~~ 412 (468)
T TIGR00788 390 ALLASILHLGSSVSGFLGVLLME 412 (468)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 34556667777777766665544
No 210
>KOG3762|consensus
Probab=62.35 E-value=11 Score=35.30 Aligned_cols=79 Identities=6% Similarity=0.088 Sum_probs=54.8
Q ss_pred hhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHHH
Q psy14099 3 RIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLR 82 (224)
Q Consensus 3 ~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR 82 (224)
++....++++.|+-..+..++++...=++ ++... . ..|.++.+-++-....+..|..+-.|.+..-|.+.|
T Consensus 423 ~ffs~klI~kiGHv~v~~lgLa~~~~Rf~--~~S~L-----~--n~W~vLPieilqgit~aliWaa~~sY~s~vaPp~l~ 493 (618)
T KOG3762|consen 423 YFFSFKLIEKIGHVNVMYLGLACNVGRFL--YYSYL-----Q--NPWMVLPIEILQGITHALIWAAIISYASHVAPPGLR 493 (618)
T ss_pred HHHHHHHHHHhcccceeeehhhHHHHHHH--HHHHh-----c--CchheeeHHHHHHHHHHHHHHHHHHHHHhhCCCcch
Confidence 34556778888877776666555444332 11111 1 356666677777777788888899999999999999
Q ss_pred HHHHHHHH
Q psy14099 83 QSLLAFCS 90 (224)
Q Consensus 83 ~~g~g~~~ 90 (224)
+++-|+..
T Consensus 494 at~Q~l~~ 501 (618)
T KOG3762|consen 494 ATAQGLLQ 501 (618)
T ss_pred HHHHHHHH
Confidence 99998864
No 211
>KOG0252|consensus
Probab=60.79 E-value=2.8 Score=38.33 Aligned_cols=82 Identities=5% Similarity=-0.058 Sum_probs=42.3
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhh----hhHhhhccccc
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAY----TVLYVNTVDMF 77 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~Elf 77 (224)
|++.-.++-|++|||......+..++++-.+. .+ +...+.....+...+.+++..+... ....+.++|-=
T Consensus 100 GQl~FG~lgD~~GRK~vYG~~liImIi~t~~~--~~----s~~~~~~~~~m~~L~~~R~~LGiGIGGDYPlSAtI~SE~a 173 (538)
T KOG0252|consen 100 GQLFFGWLGDKFGRKKVYGKELIIMIICSALS--GL----SVGTTSPLGVMMTLCFFRFLLGIGIGGDYPLSATIMSESA 173 (538)
T ss_pred HHHHHHHHHhhhcchhhhhHHHHHHHHHHHHh--cc----CCCCCCCcchhhHHHHHHHHhhccccCCCcchHHHhhhhh
Confidence 45566677888888876433222222211111 11 1111112223444455555544433 34568888988
Q ss_pred chHHHHHHHHHH
Q psy14099 78 PTPLRQSLLAFC 89 (224)
Q Consensus 78 Pt~vR~~g~g~~ 89 (224)
-.+.|++-.+..
T Consensus 174 n~~~RGa~iaav 185 (538)
T KOG0252|consen 174 NKKTRGAFIAAV 185 (538)
T ss_pred hhccccceeEEE
Confidence 888888766553
No 212
>PRK10207 dipeptide/tripeptide permease B; Provisional
Probab=58.88 E-value=64 Score=29.47 Aligned_cols=45 Identities=11% Similarity=0.036 Sum_probs=32.2
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+.-.....+...+..+.-|.+.++.++|+.+....+|+.++..+.
T Consensus 391 ~Ge~~~~~~g~~~~~~~aP~~~~g~~~g~~~l~~~ig~~lg~~l~ 435 (489)
T PRK10207 391 LGELFISALGLAMIAALVPQHLMGFILGMWFLTQAAAFLLGGYVA 435 (489)
T ss_pred HHHHHHhHHHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 333334445677778889999999999998877777776665443
No 213
>KOG2533|consensus
Probab=55.55 E-value=27 Score=32.21 Aligned_cols=56 Identities=5% Similarity=-0.059 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 51 RQTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 51 ~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.+++-++..++-++.+...-.+++-.|..+-|++-+|+-+..+.+|++++.++.+.
T Consensus 137 ~ialr~llGl~es~~wP~~~~~lg~wy~~~e~g~r~~~~~a~~~~g~i~ggliA~g 192 (495)
T KOG2533|consen 137 LIALRFLLGLFESGGWPGVVAILGNWYGKSERGLRMGIWYASASLGNIFGGLIAYG 192 (495)
T ss_pred HHHHHHHHHHHhcccchHHHHHHHhhcChhhhhhhHHHHHHhcchhhHHHHHHHHH
Confidence 44554555566777788888999999999999999999998888888877776654
No 214
>KOG0637|consensus
Probab=53.53 E-value=34 Score=31.36 Aligned_cols=43 Identities=9% Similarity=0.035 Sum_probs=30.3
Q ss_pred HHHHHhhhhHhhhcccccchHHHHH-HHHHHHHHHhhhcccccc
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQS-LLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~-g~g~~~~~~~~~~~~~~~ 102 (224)
+..+...++.=++.+.+.-..-|.+ +.++...+-.+|+.++-.
T Consensus 154 ~A~n~~qgp~ra~L~Dl~~~d~~~~~Ans~f~~f~avGnvLGY~ 197 (498)
T KOG0637|consen 154 VANNTLQGPCRALLADLARGDAKKTRANSVFSFFMAVGNVLGYA 197 (498)
T ss_pred hhhhhhhhhHHHHHHHhccChhhhhccchhHHHHHHhcceeeee
Confidence 4444556677889999988877777 777777666777765543
No 215
>PF03209 PUCC: PUCC protein; InterPro: IPR004896 This protein is required for high-level transcription of the PUC operon. It is an integral membrane protein. The family includes other proteins form Rhodobacter eg. bacteriochlorophyll synthase.
Probab=52.95 E-value=53 Score=29.46 Aligned_cols=43 Identities=16% Similarity=0.269 Sum_probs=30.9
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccc
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQ 102 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~ 102 (224)
...+...+...+..+++=|.+-|++.+++....--+|-+++..
T Consensus 101 ~G~~~s~T~~lALl~D~~~e~~R~~~v~ivw~Mli~G~iv~ai 143 (403)
T PF03209_consen 101 LGVHASGTSFLALLADLAPEERRPRVVAIVWVMLIVGIIVSAI 143 (403)
T ss_pred hhHhHhHHHHHHHHHhcCCHhhhhhhHHHHHHHHHHHHHHHHH
Confidence 3444455567899999999999999999976655444444443
No 216
>TIGR01272 gluP glucose/galactose transporter. Disruption of the loci leads to the total loss of glucose or galactose uptake in E.coli. Putative transporters in other bacterial species were isolated by functional complementation, which restored it functional activity.
Probab=52.61 E-value=19 Score=30.59 Aligned_cols=51 Identities=20% Similarity=0.152 Sum_probs=41.5
Q ss_pred HHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeehh
Q psy14099 57 IGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLLL 107 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~~ 107 (224)
+.....+........|.+.+-|.+-|++-+++...+..+|+.++|++....
T Consensus 19 ~~g~G~~~lq~~~n~~v~~~~~~~~~~~~l~~~~~~~~~G~~~gP~i~~~~ 69 (310)
T TIGR01272 19 VLASGLTILQVAANPYVSILGPIETAASRLALTQAFNKLGTTVAPLFGGSL 69 (310)
T ss_pred HHHhhHHHHHhhHHHHHHHHCCcchHHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 333444555567889999999999999999999999999999999988643
No 217
>PF03092 BT1: BT1 family; InterPro: IPR004324 Members of this family are transmembrane proteins. Several are Leishmania putative proteins that are thought to be pteridine transporters [, ]. This family also contains five putative Arabidopsis thaliana proteins of unknown function as well as two predicted prokaryotic proteins (from the cyanobacteria Synechocystis and Synechococcus).
Probab=48.67 E-value=1.1e+02 Score=27.55 Aligned_cols=50 Identities=18% Similarity=0.266 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHhhhhHhhhcccc---cchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 54 LFLIGITGITSAYTVLYVNTVDM---FPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 54 ~~~~~~~~~~~~~~~~~~~~~El---fPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+.++..++....-...-+..+|. -|.. |+.-.+.+...-.+|++++..+.
T Consensus 92 ~l~la~~g~a~~DV~aDa~vvE~~~~~p~~-~g~lqS~~~~~~~~G~lv~~~l~ 144 (433)
T PF03092_consen 92 LLFLASFGYAFADVAADALVVELARREPES-RGDLQSFVWGVRSVGSLVGSLLS 144 (433)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHhhcCCch-hHHHHHHHHHHHHHHHHHHHHhh
Confidence 33344443333333333444454 5666 77767776666666666665544
No 218
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=46.44 E-value=1.4e+02 Score=28.26 Aligned_cols=53 Identities=15% Similarity=0.161 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 52 QTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
+++.++..++.+..-.+..+...-.-|.+.-+++.|+...+-.+|+.++.-+.
T Consensus 409 i~~~~l~g~giG~~~~~~~~~~ql~~p~~~ig~a~gL~~s~R~~GGsIg~aIy 461 (599)
T PF06609_consen 409 IAFLVLAGFGIGGILVPAIVIAQLIVPDEDIGTATGLTGSIRSIGGSIGYAIY 461 (599)
T ss_pred HHHHHHHHHhHHHHHHHHHHeeEeeeCchHHHHHHHHHHHHHHHhhHHHHHHH
Confidence 34455555555555556667777788888888888887777667666555443
No 219
>TIGR00889 2A0110 nucleoside transporter. This family of proteins transports nucleosides at a high affinity. The transport mechanism is driven by proton motive force. This family includes nucleoside permease NupG and xanthosine permease from E.Coli.
Probab=45.39 E-value=94 Score=27.49 Aligned_cols=16 Identities=6% Similarity=0.098 Sum_probs=8.5
Q ss_pred HHHHhcc-cchHHHHHH
Q psy14099 6 CIWMDHV-VFRQTLFLI 21 (224)
Q Consensus 6 ~~~~~~~-~gRr~~~~~ 21 (224)
...+.|| +|||+.+..
T Consensus 58 ~g~l~dr~g~~r~~~~~ 74 (418)
T TIGR00889 58 VGIIADKWLSAQKVYAV 74 (418)
T ss_pred HHHHHHHhcccHHHHHH
Confidence 3344455 566766554
No 220
>PRK15462 dipeptide/tripeptide permease D; Provisional
Probab=44.37 E-value=1.1e+02 Score=28.30 Aligned_cols=36 Identities=11% Similarity=0.112 Sum_probs=27.1
Q ss_pred hHhhhcccccchHHHHHHHHHHHHHH-hhhcccccce
Q psy14099 68 VLYVNTVDMFPTPLRQSLLAFCSMIG-RIGQVIAPQV 103 (224)
Q Consensus 68 ~~~~~~~ElfPt~vR~~g~g~~~~~~-~~~~~~~~~~ 103 (224)
+.....+++-|.++|++.+|+-...+ .+|+.++..+
T Consensus 397 vgls~~~~laP~~~~g~~mg~w~l~~~~~~~~~~g~~ 433 (493)
T PRK15462 397 VAMSQITRIEIPGVTGVLTGIYMLLSGAIANYLAGVI 433 (493)
T ss_pred HHHHHHHHhChHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46788999999999999999976533 5666555443
No 221
>KOG2615|consensus
Probab=44.04 E-value=1e+02 Score=27.87 Aligned_cols=48 Identities=21% Similarity=0.177 Sum_probs=38.0
Q ss_pred HHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 59 ITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 59 ~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.+.....-+.......-..|..-|++..|+....+.++=.++|.+...
T Consensus 363 sf~~A~~vt~Lt~Lv~~~~~~~qrG~~~Gi~~Sl~alaRaiGPlv~g~ 410 (451)
T KOG2615|consen 363 SFSTASVVTCLTSLVHKYGPQSQRGTLNGIFRSLGALARAIGPLVSGV 410 (451)
T ss_pred HHHHHHhhHHHHHHHHhcCCcccchHHHHHHHHHHHHHHHhhhhhhhe
Confidence 343344445577888899999999999999999999999999987643
No 222
>PRK09848 glucuronide transporter; Provisional
Probab=43.49 E-value=1.2e+02 Score=26.93 Aligned_cols=17 Identities=12% Similarity=0.301 Sum_probs=8.9
Q ss_pred HHhhhhccceeeeccCC
Q psy14099 208 GLGALLGSPFCAFISDK 224 (224)
Q Consensus 208 ~~G~~~G~~~~G~lsDr 224 (224)
.++.+++.++.|.++||
T Consensus 274 ~~~~~~~~~l~~~l~~r 290 (448)
T PRK09848 274 LVGTVASAPLVPGMVAR 290 (448)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 34455555555555543
No 223
>PRK15403 multidrug efflux system protein MdtM; Provisional
Probab=42.78 E-value=9.6 Score=33.70 Aligned_cols=36 Identities=17% Similarity=0.099 Sum_probs=28.5
Q ss_pred cccccccccccchhhhhHHHHHHHHhhhhccceeeeccCC
Q psy14099 185 LLNEFNLECDENRWKLTIVGSIDGLGALLGSPFCAFISDK 224 (224)
Q Consensus 185 ivte~~lVC~~~~~~~~~~~s~~~~G~~~G~~~~G~lsDr 224 (224)
+..|++. .....+...++|++|..+|.+++|.++||
T Consensus 42 i~~~~~~----~~~~~~~~~s~~~~~~~~~~~~~G~l~dr 77 (413)
T PRK15403 42 VVRDFNA----DVSLAPASVSLYLAGGMALQWLLGPLSDR 77 (413)
T ss_pred HHHHhCC----CHHHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 4555553 24456777899999999999999999997
No 224
>KOG2563|consensus
Probab=41.05 E-value=1e+02 Score=28.29 Aligned_cols=28 Identities=18% Similarity=0.181 Sum_probs=19.9
Q ss_pred ccccchHHHHHHHHHHHHHHhhhccccc
Q psy14099 74 VDMFPTPLRQSLLAFCSMIGRIGQVIAP 101 (224)
Q Consensus 74 ~ElfPt~vR~~g~g~~~~~~~~~~~~~~ 101 (224)
+--||...|+++..++.+..-+|..++-
T Consensus 166 ~~WF~~~qra~A~~~~v~~n~LGvavg~ 193 (480)
T KOG2563|consen 166 AVWFPPDQRAIATVLGVMGNPLGVAVGF 193 (480)
T ss_pred HhhCCcchhhhhhhHHHhcchHHHHHHh
Confidence 4469999999999888776555444333
No 225
>KOG4686|consensus
Probab=34.64 E-value=1.8e+02 Score=25.49 Aligned_cols=40 Identities=15% Similarity=0.249 Sum_probs=33.5
Q ss_pred hhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 67 TVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 67 ~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
...|...+-+-|.+--+|+.|+++.+..+|-.+.|.+...
T Consensus 371 cslWP~va~~vpE~qLGTaygf~qsIqNLgla~i~Iiag~ 410 (459)
T KOG4686|consen 371 CSLWPCVASLVPEEQLGTAYGFIQSIQNLGLAFIPIIAGF 410 (459)
T ss_pred HHHhhhhhhhCCHHHhcchHHHHHHHHhhhhhHHhhhhhe
Confidence 3467788888899999999999999999998888876654
No 226
>COG5336 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.37 E-value=51 Score=23.84 Aligned_cols=11 Identities=18% Similarity=0.114 Sum_probs=5.8
Q ss_pred hHHHHHHHHHH
Q psy14099 48 VVFRQTLFLIG 58 (224)
Q Consensus 48 ~~~~~~~~~~~ 58 (224)
+|.++++.+++
T Consensus 74 PwglIv~lllG 84 (116)
T COG5336 74 PWGLIVFLLLG 84 (116)
T ss_pred cHHHHHHHHHH
Confidence 55555555554
No 227
>PF11947 DUF3464: Protein of unknown function (DUF3464); InterPro: IPR021855 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 137 to 196 amino acids in length.
Probab=32.32 E-value=1.7e+02 Score=22.57 Aligned_cols=30 Identities=13% Similarity=0.045 Sum_probs=20.0
Q ss_pred HHHhhhhHhhhcccccchHHHHHHHHHHHH
Q psy14099 62 ITSAYTVLYVNTVDMFPTPLRQSLLAFCSM 91 (224)
Q Consensus 62 ~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~ 91 (224)
..+..++.|..++--+-.+.-++.+|+-..
T Consensus 108 g~gllGisYGilSaSWD~~r~GSllG~~e~ 137 (153)
T PF11947_consen 108 GLGLLGISYGILSASWDPEREGSLLGWEEF 137 (153)
T ss_pred HHHHHhhhhhhcccccCCCCCCCcccHHHH
Confidence 344456677777777777777777777543
No 228
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=30.77 E-value=2.6e+02 Score=25.12 Aligned_cols=45 Identities=16% Similarity=0.116 Sum_probs=29.9
Q ss_pred HHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 60 TGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 60 ~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
..-+..+.-.+....|--|.+-|-.++|.....-.+|-.++.++.
T Consensus 347 LlGGa~YVNtF~~I~~~~~~~~REFslg~vsvsds~GI~lAgll~ 391 (402)
T PF02487_consen 347 LLGGASYVNTFYRISEEVPPEDREFSLGAVSVSDSLGILLAGLLG 391 (402)
T ss_pred HhhhHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 333444433455556778999999999988777777666666544
No 229
>KOG2532|consensus
Probab=30.18 E-value=2e+02 Score=26.22 Aligned_cols=29 Identities=14% Similarity=0.296 Sum_probs=24.1
Q ss_pred chHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 78 PTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 78 Pt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
-.+.=+..+|+.+..+.+.++++|++...
T Consensus 387 apq~a~~l~g~~~~~~~~~~~~~P~~vg~ 415 (466)
T KOG2532|consen 387 APQHAGFVMGIINFVGALAGFIAPLLVGI 415 (466)
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHHheee
Confidence 34666788999999999999999987755
No 230
>PF07274 DUF1440: Protein of unknown function (DUF1440); InterPro: IPR009898 This family contains a number of bacterial proteins of unknown function approximately 180 residues long. These are possibly integral membrane proteins.
Probab=28.97 E-value=55 Score=24.65 Aligned_cols=33 Identities=21% Similarity=0.226 Sum_probs=25.4
Q ss_pred HHHHHHHHhhhhHhhhcccccchHHHHHHHHHH
Q psy14099 57 IGITGITSAYTVLYVNTVDMFPTPLRQSLLAFC 89 (224)
Q Consensus 57 ~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~ 89 (224)
+.-+.++..++..|.+.+|.+|.--...|..++
T Consensus 57 ~vH~~FSi~fa~~Y~~~ae~~p~i~l~~G~~fG 89 (135)
T PF07274_consen 57 IVHFGFSIVFAVAYCVLAEYWPKIKLWQGAAFG 89 (135)
T ss_pred hhhHHHHHHHHHHHHHHHHHCCccchhhhHHHH
Confidence 334566888889999999999987776666554
No 231
>COG0738 FucP Fucose permease [Carbohydrate transport and metabolism]
Probab=28.58 E-value=72 Score=28.75 Aligned_cols=49 Identities=6% Similarity=-0.008 Sum_probs=30.4
Q ss_pred HHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhcccccceeeh
Q psy14099 56 LIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVFLL 106 (224)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~~~ 106 (224)
.+-.++++..|...+....+..| +.-..+ |..-..+-+||.+.|++...
T Consensus 332 ~~ig~F~simfPTIfslal~~l~-~~ts~~-s~~l~maivGGAiiP~l~G~ 380 (422)
T COG0738 332 FLIGLFNSIMFPTIFSLALKNLG-EHTSVG-SGLLVMAIVGGAIIPPLQGV 380 (422)
T ss_pred HHHHHHhHHHHHHHHHHHHhccC-cccccc-ceeeeeheecchHHHHHHHH
Confidence 33345678888888888888888 322222 22334456777777776643
No 232
>TIGR00805 oat sodium-independent organic anion transporter. Proteins of the OAT family catalyze the Na+-independent facilitated transport of organic anions such as bromosulfobromophthalein and prostaglandins as well as conjugated and unconjugated bile acids (taurocholate and cholate, respectively). These transporters have been characterized in mammals, but homologues are present in C. elegans and A. thaliana. Some of the mammalian proteins exhibit a high degree of tissue specificity. For example, the rat OAT is found at high levels in liver and kidney and at lower levels in other tissues. These proteins possess 10-12 putative a-helical transmembrane spanners. They may catalyze electrogenic anion uniport or anion exchange.
Probab=27.86 E-value=64 Score=30.62 Aligned_cols=52 Identities=21% Similarity=0.266 Sum_probs=38.4
Q ss_pred hhhhHhhhcccccchHHHHHHHHHHHHHHhh-hcccccceeehhcccccccccccCc
Q psy14099 65 AYTVLYVNTVDMFPTPLRQSLLAFCSMIGRI-GQVIAPQVFLLLGFVLGDSRCLIPE 120 (224)
Q Consensus 65 ~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~p~~~C~~p~ 120 (224)
...+....+--.-|.+.|+.++|+-..+.|+ |.+-+|.++.. ..|+.|-+-+
T Consensus 535 ~~~p~~~i~lR~V~~~~rs~alg~~~~~~rllg~iP~pi~fG~----~iD~sC~~W~ 587 (633)
T TIGR00805 535 TAVPLYMVLLRVVNPEEKSLAIGLQWLCMRVFATIPAPILFGL----LIDVSCLHWQ 587 (633)
T ss_pred ccCchheEEeeccCcccchHHhhHHHHHHHHhcCCChhHHHhh----hhhchhheec
Confidence 3345566667788999999999998888875 55678876655 5577776664
No 233
>PF02343 TRA-1_regulated: TRA-1 regulated protein R03H10.4; InterPro: IPR003326 This family of proteins represents the protein product of the gene R03H10.4 which is located near a sequence that matches the TRA-1 binding consensus. TRA-1 is a transcription factor which controls sexual differentiation in C.elegans. R03H10.4 shows male-enriched reporter gene expression and acts as a direct target of TRA-1 regulation [].
Probab=26.70 E-value=17 Score=27.04 Aligned_cols=18 Identities=22% Similarity=0.820 Sum_probs=14.7
Q ss_pred ccccccccccccchhhhh
Q psy14099 184 NLLNEFNLECDENRWKLT 201 (224)
Q Consensus 184 tivte~~lVC~~~~~~~~ 201 (224)
.+.+.|+++|++++|+.+
T Consensus 78 d~fs~FGiiCEn~~WyaT 95 (131)
T PF02343_consen 78 DIFSYFGIICENGKWYAT 95 (131)
T ss_pred chhhhcCeEEeCCEEEEE
Confidence 788899999977788753
No 234
>KOG3098|consensus
Probab=26.57 E-value=2.1e+02 Score=26.27 Aligned_cols=78 Identities=10% Similarity=-0.005 Sum_probs=47.1
Q ss_pred chhhHHHHhcccchHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHHHHHHHHHHHHHHhhhhHhhhcccccchHH
Q psy14099 2 SRIVCIWMDHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPLHHVVFRQTLFLIGITGITSAYTVLYVNTVDMFPTPL 81 (224)
Q Consensus 2 ~~l~~~~~~~~~gRr~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ElfPt~v 81 (224)
.++++.-+.++.+-|+.+..+..+-.+ +.+-+ . ++ + .+.......+..++.+..|...-.|.+|..+.+.
T Consensus 66 ~~l~~psiv~~i~~K~~lv~ga~~y~~-f~~gf---l--~~--N--~y~~yfssallG~Gaallw~GqG~ylt~~st~~t 135 (461)
T KOG3098|consen 66 SCLFAPSIVNFLGPKWALVIGATCYAA-FPLGF---L--FP--N--SYYLYFSSALLGFGAALLWTGQGGYLTSNSTRET 135 (461)
T ss_pred HHHhhHHHHHHhhHHHHHHHHhHHHHH-HHHHH---H--hc--c--hHHHHHHHHHhhhhHHheecccceehhhcCChhh
Confidence 356677788999999988775444332 22111 1 12 2 2233333344445566667778899999998887
Q ss_pred HHHHHHHH
Q psy14099 82 RQSLLAFC 89 (224)
Q Consensus 82 R~~g~g~~ 89 (224)
+.+-.++.
T Consensus 136 ie~Nisi~ 143 (461)
T KOG3098|consen 136 IERNISIF 143 (461)
T ss_pred HHHHHHHH
Confidence 66655554
No 235
>KOG0253|consensus
Probab=25.99 E-value=32 Score=31.02 Aligned_cols=14 Identities=14% Similarity=0.112 Sum_probs=8.5
Q ss_pred HHhcccchHHHHHH
Q psy14099 8 WMDHVVFRQTLFLI 21 (224)
Q Consensus 8 ~~~~~~gRr~~~~~ 21 (224)
++.|+.|||+.+..
T Consensus 135 l~~d~~grr~~f~~ 148 (528)
T KOG0253|consen 135 LSADTIGRRKGFNL 148 (528)
T ss_pred eehhhhhcchhhhh
Confidence 34577777766544
No 236
>KOG3626|consensus
Probab=24.72 E-value=67 Score=31.21 Aligned_cols=65 Identities=23% Similarity=0.244 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhh-hcccccceeehhcccccccccccCc
Q psy14099 52 QTLFLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRI-GQVIAPQVFLLLGFVLGDSRCLIPE 120 (224)
Q Consensus 52 ~~~~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~-~~~~~~~~~~~~~~~~p~~~C~~p~ 120 (224)
+++.++..|+.+.+..+.+..+--.-|.+.|+.++|+..++-|+ |.+-+|.++.. ..|..|-.-+
T Consensus 590 l~~~~~~sf~~~~~~~p~~~i~LR~V~~e~ks~AlG~~~~~irllg~IPsPIifG~----~ID~tCl~W~ 655 (735)
T KOG3626|consen 590 LALFAIGSFIGALGAVPGMLIVLRCVPPEEKSFALGFQWMLIRLLGFIPSPIIFGA----VIDTTCLLWG 655 (735)
T ss_pred HHHHHHHHHHHHhccCcceEEEEEccCchhchhhhHHHHHHHHHHhcCCchHhhhh----hHhhHHHHhh
Confidence 33344445555555556778888889999999999998777775 55567776655 5677776553
No 237
>KOG2533|consensus
Probab=24.02 E-value=2.5e+02 Score=25.92 Aligned_cols=43 Identities=9% Similarity=-0.039 Sum_probs=24.4
Q ss_pred HHhhhhHhhhcccccchHHHHHHHHHHHHH-Hhhhcccccceee
Q psy14099 63 TSAYTVLYVNTVDMFPTPLRQSLLAFCSMI-GRIGQVIAPQVFL 105 (224)
Q Consensus 63 ~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~-~~~~~~~~~~~~~ 105 (224)
............+...-..|.......+.. ...++..+|.+..
T Consensus 382 ~~~~~~~~~w~s~~~~g~~k~~~~~~~~i~~~~s~~~~~~~~~~ 425 (495)
T KOG2533|consen 382 IATAIIALSWTSANLAGNTKALTTVSAIIDGTGSAGAISGQLFR 425 (495)
T ss_pred HHHHHHHHhhccccccchHHhHHHHhhhhcchhHHHHhhhhhcc
Confidence 334445667777777777776655554433 3455555555443
No 238
>PTZ00207 hypothetical protein; Provisional
Probab=23.32 E-value=2.6e+02 Score=26.54 Aligned_cols=45 Identities=11% Similarity=0.097 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhhhHhhhcccccchHHHHHHHHHHHHHHhhhccccccee
Q psy14099 55 FLIGITGITSAYTVLYVNTVDMFPTPLRQSLLAFCSMIGRIGQVIAPQVF 104 (224)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~ElfPt~vR~~g~g~~~~~~~~~~~~~~~~~ 104 (224)
.++..++++..+++....++|+|- +.=++ -+++..+++.++++++
T Consensus 459 ~~lvg~~~G~~~~~~~~i~selFg-k~~g~----~yN~~~~a~pigs~~~ 503 (591)
T PTZ00207 459 YFIAAFANGFMAATIALVTRTIFA-KDPAK----HYNFCFLGSVLSAIFL 503 (591)
T ss_pred HHHHHHHhhHhHHHHHHHHHHHhc-cchHH----HhhHHhHHHHHHHHHH
Confidence 344456677788899999999997 44444 4444444444444444
No 239
>TIGR01301 GPH_sucrose GPH family sucrose/H+ symporter. This model represents sucrose/proton symporters, found in plants, from the Glycoside-Pentoside-Hexuronide (GPH)/cation symporter family. These proteins are predicted to have 12 transmembrane domains. Members may export sucrose (e.g. SUT1, SUT4) from green parts to the phloem for long-distance transport or import sucrose (e.g SUT2) to sucrose sinks such as the tap root of the carrot.
Probab=20.11 E-value=4.9e+02 Score=23.85 Aligned_cols=41 Identities=10% Similarity=-0.014 Sum_probs=25.1
Q ss_pred HHHHHHhhhhHhhhcccccchHHH--HHHHHHHHHHHhhhccc
Q psy14099 59 ITGITSAYTVLYVNTVDMFPTPLR--QSLLAFCSMIGRIGQVI 99 (224)
Q Consensus 59 ~~~~~~~~~~~~~~~~ElfPt~vR--~~g~g~~~~~~~~~~~~ 99 (224)
.+..+..+++=|+..+|.-|.+-| +.-+|+-+.+--+.-++
T Consensus 391 Gi~~A~~~siPfal~s~~~~~~~~~~G~~mgilN~~I~lpQii 433 (477)
T TIGR01301 391 GIPLAITYSIPFALASIRSSNLGAGQGLSMGVLNLAIVIPQII 433 (477)
T ss_pred hHHHHHHHHHhHHHHHHHccccCCCCcchhhHHHHHHHHHHHH
Confidence 344555566667888888886656 55566666555444333
Done!