Query psy1410
Match_columns 246
No_of_seqs 203 out of 346
Neff 5.1
Searched_HMMs 29240
Date Fri Aug 16 19:32:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1410.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/1410hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ymb_A MITD1, MIT domain-conta 100.0 4.1E-97 1E-101 665.9 16.9 237 4-246 19-256 (257)
2 4a5z_A MITD1, MIT domain-conta 100.0 7.7E-75 2.6E-79 489.9 18.0 155 81-241 8-163 (163)
3 1wfd_A Hypothetical protein 15 99.9 1.9E-21 6.5E-26 150.2 11.3 82 3-84 10-91 (93)
4 2w2u_A Hypothetical P60 katani 99.8 6.1E-21 2.1E-25 144.9 9.0 70 3-72 14-83 (83)
5 2v6y_A AAA family ATPase, P60 99.8 6E-21 2E-25 144.6 7.8 69 4-72 7-75 (83)
6 4a5x_A MITD1, MIT domain-conta 99.8 2.8E-20 9.7E-25 142.0 10.9 77 1-77 9-85 (86)
7 2v6x_A Vacuolar protein sortin 99.8 1.4E-19 4.9E-24 136.8 11.0 76 2-77 7-82 (85)
8 2cpt_A SKD1 protein, vacuolar 99.8 2.8E-18 9.4E-23 137.8 11.2 74 3-76 13-87 (117)
9 2zan_A Vacuolar protein sortin 99.4 8.8E-15 3E-19 138.2 0.0 73 4-76 7-80 (444)
10 2dl1_A Spartin; SPG20, MIT, st 97.5 0.0011 3.7E-08 53.0 10.5 69 5-73 19-95 (116)
11 2crb_A Nuclear receptor bindin 97.1 0.0074 2.5E-07 46.6 11.5 73 1-73 8-80 (97)
12 3eab_A Spastin; spastin, MIT, 97.1 0.0016 5.6E-08 49.7 7.7 61 5-65 13-81 (89)
13 2xze_A STAM-binding protein; h 95.9 0.04 1.4E-06 45.1 8.8 70 4-74 36-112 (146)
14 2rpa_A Katanin P60 ATPase-cont 95.6 0.08 2.7E-06 39.3 8.7 67 5-71 9-75 (78)
15 2a9u_A Ubiquitin carboxyl-term 95.5 0.074 2.5E-06 43.6 9.0 71 4-75 38-114 (144)
16 2hr2_A Hypothetical protein; a 93.2 0.31 1.1E-05 40.2 7.9 80 10-94 59-138 (159)
17 3rkv_A Putative peptidylprolyl 90.2 2.2 7.4E-05 32.3 9.3 39 4-42 7-45 (162)
18 1ug7_A 2610208M17RIK protein; 88.1 8.1 0.00028 31.1 11.3 84 6-106 17-107 (128)
19 1byr_A Protein (endonuclease); 87.0 8.3 0.00028 29.6 10.8 99 95-211 14-113 (155)
20 2hr2_A Hypothetical protein; a 86.8 0.86 2.9E-05 37.5 5.1 35 5-39 8-42 (159)
21 3n71_A Histone lysine methyltr 85.6 3.6 0.00012 39.1 9.5 55 6-61 391-445 (490)
22 2ff4_A Probable regulatory pro 85.3 1.3 4.3E-05 40.5 6.0 103 20-122 217-329 (388)
23 4gcn_A Protein STI-1; structur 84.9 0.96 3.3E-05 33.7 4.2 23 15-37 49-71 (127)
24 3gyz_A Chaperone protein IPGC; 83.7 3.3 0.00011 32.4 7.1 17 20-36 82-98 (151)
25 4gcn_A Protein STI-1; structur 82.3 5.7 0.0002 29.3 7.6 34 4-37 4-37 (127)
26 3qwp_A SET and MYND domain-con 81.0 6.3 0.00022 36.5 8.9 48 6-54 369-416 (429)
27 1zu2_A Mitochondrial import re 80.0 11 0.00036 30.9 9.0 67 5-75 62-147 (158)
28 3n71_A Histone lysine methyltr 80.0 3.5 0.00012 39.1 6.9 58 4-62 305-362 (490)
29 3ma5_A Tetratricopeptide repea 79.9 2.7 9.3E-05 29.6 4.8 25 12-36 11-35 (100)
30 3upv_A Heat shock protein STI1 79.2 3.4 0.00011 29.6 5.2 31 7-37 3-33 (126)
31 4gco_A Protein STI-1; structur 77.0 4 0.00014 30.3 5.2 31 7-37 12-42 (126)
32 2l6j_A TPR repeat-containing p 75.1 5.1 0.00017 27.3 5.0 31 7-37 3-33 (111)
33 4gco_A Protein STI-1; structur 74.5 4.6 0.00016 29.9 4.9 23 14-36 53-75 (126)
34 3qww_A SET and MYND domain-con 74.2 18 0.00062 33.6 9.9 48 8-56 340-387 (433)
35 1ihg_A Cyclophilin 40; ppiase 74.2 11 0.00038 33.6 8.2 36 5-40 220-255 (370)
36 3c3r_A Programmed cell death 6 73.7 11 0.00037 34.6 8.2 67 7-73 274-340 (380)
37 4ga2_A E3 SUMO-protein ligase 70.9 5.6 0.00019 30.1 4.8 17 20-36 43-59 (150)
38 3vtx_A MAMA; tetratricopeptide 70.6 9.7 0.00033 28.7 6.1 31 7-37 4-34 (184)
39 1hxi_A PEX5, peroxisome target 70.4 6.8 0.00023 28.7 5.0 16 21-36 64-79 (121)
40 4g1t_A Interferon-induced prot 69.9 15 0.0005 32.1 7.8 59 13-71 56-126 (472)
41 2kck_A TPR repeat; tetratricop 69.0 8.1 0.00028 25.8 4.8 22 15-36 13-34 (112)
42 3sz7_A HSC70 cochaperone (SGT) 68.6 8.1 0.00028 29.0 5.2 32 6-37 9-40 (164)
43 1elw_A TPR1-domain of HOP; HOP 67.8 7.4 0.00025 26.2 4.4 31 7-37 3-33 (118)
44 3rau_A Tyrosine-protein phosph 67.7 26 0.00088 32.0 9.3 66 7-72 251-321 (363)
45 3rkv_A Putative peptidylprolyl 67.6 27 0.00091 26.0 8.0 26 11-36 66-91 (162)
46 3rzi_A Probable 3-deoxy-D-arab 66.7 19 0.00063 34.6 8.2 69 124-205 313-382 (462)
47 1a17_A Serine/threonine protei 66.1 12 0.00039 27.2 5.5 34 4-37 9-42 (166)
48 3sz7_A HSC70 cochaperone (SGT) 65.6 9.1 0.00031 28.7 4.9 16 21-36 92-107 (164)
49 3bee_A Putative YFRE protein; 64.2 7.3 0.00025 28.2 4.0 51 6-67 26-91 (93)
50 1na3_A Designed protein CTPR2; 63.8 14 0.00049 24.0 5.2 31 7-37 8-38 (91)
51 2rkk_A Vacuolar protein sortin 63.5 24 0.00081 29.5 7.4 118 7-131 5-133 (168)
52 2fbn_A 70 kDa peptidylprolyl i 62.9 12 0.00041 29.0 5.3 33 5-37 35-67 (198)
53 2pl2_A Hypothetical conserved 62.2 11 0.00036 30.2 5.0 33 5-37 100-147 (217)
54 2kc7_A BFR218_protein; tetratr 61.8 8.9 0.0003 26.0 3.9 25 12-36 4-28 (99)
55 3qww_A SET and MYND domain-con 60.9 20 0.00069 33.3 7.3 55 7-62 297-351 (433)
56 4abn_A Tetratricopeptide repea 60.0 38 0.0013 30.8 8.9 32 5-36 237-286 (474)
57 1zb1_A BRO1 protein; AIP1, BRO 59.3 27 0.00094 31.9 7.8 67 7-73 256-325 (392)
58 1elr_A TPR2A-domain of HOP; HO 59.3 18 0.00061 24.7 5.2 31 7-37 3-33 (131)
59 2qfc_A PLCR protein; TPR, HTH, 58.5 22 0.00075 29.5 6.5 30 9-38 197-226 (293)
60 3urz_A Uncharacterized protein 57.1 50 0.0017 25.9 8.2 23 14-36 60-82 (208)
61 3q49_B STIP1 homology and U bo 57.0 17 0.00058 25.7 4.8 31 7-37 8-38 (137)
62 3upv_A Heat shock protein STI1 56.9 39 0.0013 23.7 6.9 25 12-36 42-66 (126)
63 3ro3_A PINS homolog, G-protein 56.7 24 0.00082 24.7 5.6 37 4-40 5-41 (164)
64 3r9m_A BRO1 domain-containing 56.5 52 0.0018 30.0 9.1 67 7-73 252-333 (376)
65 1o3u_A Conserved hypothetical 56.4 26 0.00088 27.2 6.2 39 4-42 12-50 (135)
66 2xs1_A Programmed cell death 6 55.9 28 0.00094 34.6 7.6 67 7-73 259-325 (704)
67 3ma5_A Tetratricopeptide repea 55.5 19 0.00065 25.0 4.8 33 5-37 23-70 (100)
68 2xcb_A PCRH, regulatory protei 55.2 11 0.00037 27.8 3.6 19 18-36 62-80 (142)
69 2xcb_A PCRH, regulatory protei 55.1 21 0.0007 26.2 5.2 30 7-36 17-46 (142)
70 1qqe_A Vesicular transport pro 54.9 21 0.00071 29.8 5.8 29 11-39 80-108 (292)
71 3gyz_A Chaperone protein IPGC; 54.9 19 0.00065 27.9 5.2 30 7-36 35-64 (151)
72 1vp7_A Exodeoxyribonuclease VI 54.7 42 0.0015 25.7 6.9 34 5-38 32-67 (100)
73 1qqe_A Vesicular transport pro 54.7 21 0.00073 29.8 5.8 23 17-39 126-149 (292)
74 1kt0_A FKBP51, 51 kDa FK506-bi 54.4 40 0.0014 30.6 8.0 33 6-38 266-298 (457)
75 2vgx_A Chaperone SYCD; alterna 53.9 21 0.00072 26.9 5.2 30 7-36 20-49 (148)
76 3urz_A Uncharacterized protein 53.8 14 0.00047 29.3 4.2 31 7-37 3-33 (208)
77 2dba_A Smooth muscle cell asso 53.5 15 0.00053 25.9 4.1 30 7-36 27-56 (148)
78 2pl2_A Hypothetical conserved 53.4 11 0.00038 30.1 3.6 17 5-21 55-71 (217)
79 2kc7_A BFR218_protein; tetratr 53.2 16 0.00056 24.6 4.1 19 18-36 45-63 (99)
80 2vyi_A SGTA protein; chaperone 53.1 26 0.0009 23.7 5.2 32 6-37 10-41 (131)
81 3k9i_A BH0479 protein; putativ 51.8 26 0.00091 24.6 5.2 26 12-37 31-56 (117)
82 3qwp_A SET and MYND domain-con 51.7 50 0.0017 30.4 8.2 48 8-56 329-376 (429)
83 1wol_A ST0689, 122AA long cons 51.4 37 0.0012 25.5 6.2 39 4-42 7-45 (122)
84 4gyw_A UDP-N-acetylglucosamine 51.0 16 0.00054 36.3 5.0 18 171-188 305-322 (723)
85 2ifu_A Gamma-SNAP; membrane fu 50.9 23 0.0008 29.8 5.5 26 13-39 121-146 (307)
86 3ro2_A PINS homolog, G-protein 50.6 64 0.0022 25.5 7.8 31 7-37 4-34 (338)
87 1na3_A Designed protein CTPR2; 50.3 29 0.00098 22.4 4.8 31 6-36 26-71 (91)
88 1nfv_A Bacterioferritin; 24 su 50.2 65 0.0022 25.4 7.8 72 24-95 92-172 (179)
89 2lni_A Stress-induced-phosphop 49.5 16 0.00056 25.2 3.6 30 7-36 15-44 (133)
90 1ufb_A TT1696 protein; structu 48.7 38 0.0013 25.4 5.9 39 4-42 7-45 (127)
91 3ro3_A PINS homolog, G-protein 48.3 40 0.0014 23.5 5.7 30 10-39 51-80 (164)
92 4a1s_A PINS, partner of inscut 48.3 81 0.0028 26.6 8.5 33 5-37 45-77 (411)
93 4abn_A Tetratricopeptide repea 48.2 13 0.00044 34.0 3.6 34 4-37 194-250 (474)
94 2xev_A YBGF; tetratricopeptide 48.0 56 0.0019 22.5 6.4 23 14-36 45-67 (129)
95 3uq3_A Heat shock protein STI1 47.4 29 0.001 26.8 5.2 26 10-35 7-32 (258)
96 2gw1_A Mitochondrial precursor 47.2 28 0.00095 30.2 5.5 33 5-37 3-35 (514)
97 3vtx_A MAMA; tetratricopeptide 46.9 23 0.00077 26.6 4.3 24 14-37 113-136 (184)
98 3k9i_A BH0479 protein; putativ 46.4 22 0.00076 25.1 4.0 17 20-36 73-89 (117)
99 1xnf_A Lipoprotein NLPI; TPR, 46.1 28 0.00097 27.3 5.0 16 21-36 90-105 (275)
100 2c2l_A CHIP, carboxy terminus 46.0 25 0.00085 29.5 4.8 28 9-36 5-32 (281)
101 4a1g_A Mitotic checkpoint seri 45.6 47 0.0016 27.0 6.2 49 8-65 101-149 (152)
102 1na0_A Designed protein CTPR3; 45.3 39 0.0013 22.6 5.0 30 8-37 9-38 (125)
103 2wvi_A Mitotic checkpoint seri 45.1 69 0.0024 26.3 7.3 51 8-67 96-146 (164)
104 1hxi_A PEX5, peroxisome target 45.0 26 0.0009 25.3 4.3 26 11-36 20-45 (121)
105 2e2a_A Protein (enzyme IIA); h 44.9 45 0.0015 25.6 5.7 35 7-41 19-53 (105)
106 1wcr_A PTS system, N, N'-diace 44.8 46 0.0016 25.4 5.7 35 7-41 17-51 (103)
107 2if4_A ATFKBP42; FKBP-like, al 44.7 18 0.00062 31.4 3.9 34 5-38 176-209 (338)
108 2fbn_A 70 kDa peptidylprolyl i 44.5 77 0.0026 24.2 7.2 28 9-36 89-116 (198)
109 3esl_A Checkpoint serine/threo 44.5 67 0.0023 27.4 7.3 50 8-66 115-164 (202)
110 2l6j_A TPR repeat-containing p 44.4 28 0.00096 23.4 4.2 32 5-36 20-66 (111)
111 2ifu_A Gamma-SNAP; membrane fu 44.3 40 0.0014 28.3 5.9 32 7-38 34-66 (307)
112 2kat_A Uncharacterized protein 44.3 36 0.0012 23.6 4.8 25 12-36 23-47 (115)
113 2vgx_A Chaperone SYCD; alterna 44.2 32 0.0011 25.8 4.8 31 6-36 38-83 (148)
114 3l8r_A PTCA, putative PTS syst 44.1 45 0.0015 26.3 5.7 35 7-41 36-70 (120)
115 3u3w_A Transcriptional activat 44.0 53 0.0018 27.1 6.6 27 13-39 201-227 (293)
116 2xev_A YBGF; tetratricopeptide 43.9 30 0.001 24.0 4.3 26 11-36 5-30 (129)
117 4i17_A Hypothetical protein; T 43.7 31 0.0011 26.9 4.8 14 6-19 24-37 (228)
118 4g1t_A Interferon-induced prot 43.6 84 0.0029 27.1 8.1 22 15-36 341-362 (472)
119 3k1s_A PTS system, cellobiose- 43.3 49 0.0017 25.6 5.7 35 7-41 21-55 (109)
120 2v5f_A Prolyl 4-hydroxylase su 43.1 40 0.0014 23.9 5.0 24 13-36 51-74 (104)
121 1ihg_A Cyclophilin 40; ppiase 43.1 89 0.0031 27.6 8.3 29 8-36 273-301 (370)
122 4eqf_A PEX5-related protein; a 42.7 30 0.001 29.0 4.8 32 5-36 193-241 (365)
123 1elr_A TPR2A-domain of HOP; HO 42.0 46 0.0016 22.5 5.0 25 12-36 83-107 (131)
124 1hh8_A P67PHOX, NCF-2, neutrop 41.6 18 0.00063 27.7 3.1 30 6-35 4-33 (213)
125 1pc2_A Mitochondria fission pr 41.6 73 0.0025 25.7 6.8 59 4-62 50-118 (152)
126 2vkj_A TM1634; membrane protei 41.5 47 0.0016 25.5 5.2 42 6-54 51-92 (106)
127 1usy_A ATP phosphoribosyltrans 41.5 15 0.00051 32.0 2.8 35 165-215 201-236 (275)
128 1p5q_A FKBP52, FK506-binding p 41.4 32 0.0011 29.8 4.9 32 6-37 145-176 (336)
129 1wao_1 Serine/threonine protei 41.2 45 0.0015 30.6 6.2 31 6-36 23-68 (477)
130 3sf4_A G-protein-signaling mod 41.0 94 0.0032 25.7 7.7 32 6-37 7-38 (406)
131 2kck_A TPR repeat; tetratricop 40.9 29 0.00098 22.9 3.7 16 5-20 22-37 (112)
132 2e2e_A Formate-dependent nitri 40.2 1.1E+02 0.0038 22.6 7.5 56 6-72 98-168 (177)
133 2lni_A Stress-induced-phosphop 39.7 48 0.0016 22.6 4.8 22 14-35 56-77 (133)
134 3mv2_A Coatomer subunit alpha; 39.4 52 0.0018 30.1 6.1 55 9-63 115-170 (325)
135 4i17_A Hypothetical protein; T 39.4 1.3E+02 0.0043 23.2 7.9 41 18-67 127-169 (228)
136 3hym_B Cell division cycle pro 38.7 49 0.0017 26.6 5.4 18 20-37 248-265 (330)
137 2kat_A Uncharacterized protein 38.7 44 0.0015 23.1 4.6 32 6-37 36-82 (115)
138 4ga2_A E3 SUMO-protein ligase 38.7 34 0.0012 25.6 4.2 15 31-45 47-61 (150)
139 2ond_A Cleavage stimulation fa 38.4 32 0.0011 28.8 4.3 16 21-36 182-197 (308)
140 3gw4_A Uncharacterized protein 37.8 68 0.0023 23.9 5.8 29 8-36 107-135 (203)
141 1ouv_A Conserved hypothetical 37.7 37 0.0013 27.3 4.5 15 21-35 91-105 (273)
142 3u64_A Protein TP_0956; tetrat 37.6 41 0.0014 30.5 5.1 33 4-36 178-232 (301)
143 1ouv_A Conserved hypothetical 37.2 38 0.0013 27.2 4.5 32 5-36 94-142 (273)
144 3uoi_A Bacterioferritin, BFR; 37.1 1.4E+02 0.0047 22.8 7.7 54 26-79 91-147 (161)
145 2qqy_A Sigma B operon; dodecam 36.2 1.3E+02 0.0044 22.4 7.2 51 24-74 90-143 (149)
146 2qfc_A PLCR protein; TPR, HTH, 36.1 47 0.0016 27.4 5.0 14 5-18 171-184 (293)
147 2dba_A Smooth muscle cell asso 35.9 66 0.0023 22.4 5.2 27 11-37 68-94 (148)
148 3gw4_A Uncharacterized protein 35.8 76 0.0026 23.6 5.8 29 11-39 69-97 (203)
149 1elw_A TPR1-domain of HOP; HOP 35.4 57 0.002 21.5 4.6 31 6-36 21-66 (118)
150 2vyi_A SGTA protein; chaperone 35.2 64 0.0022 21.6 4.8 22 14-35 52-73 (131)
151 2k0m_A Uncharacterized protein 34.7 6 0.0002 30.6 -0.8 30 202-233 55-97 (104)
152 3edt_B KLC 2, kinesin light ch 34.6 1.6E+02 0.0053 22.7 8.9 33 10-42 87-119 (283)
153 3rac_A Histidine-tRNA ligase; 34.1 17 0.00059 33.2 2.1 38 163-215 278-316 (373)
154 3od1_A ATP phosphoribosyltrans 33.3 20 0.00067 33.2 2.3 39 162-215 242-280 (400)
155 3nf1_A KLC 1, kinesin light ch 33.1 1.8E+02 0.0061 22.9 8.9 36 6-41 25-60 (311)
156 3edt_B KLC 2, kinesin light ch 33.1 1.7E+02 0.0057 22.5 9.1 41 14-55 133-173 (283)
157 1z7m_A ATP phosphoribosyltrans 32.3 31 0.0011 31.1 3.4 35 163-215 253-287 (344)
158 3uq3_A Heat shock protein STI1 32.2 1.5E+02 0.0052 22.5 7.2 29 8-36 79-107 (258)
159 3ly7_A Transcriptional activat 32.0 49 0.0017 30.6 4.8 15 22-36 291-305 (372)
160 4gyw_A UDP-N-acetylglucosamine 31.8 51 0.0018 32.6 5.2 33 5-37 25-72 (723)
161 1p5q_A FKBP52, FK506-binding p 31.7 1.8E+02 0.0061 24.9 8.2 16 21-36 243-258 (336)
162 3u3w_A Transcriptional activat 31.5 66 0.0023 26.5 5.2 27 13-39 160-186 (293)
163 1hh8_A P67PHOX, NCF-2, neutrop 31.3 67 0.0023 24.3 4.8 27 11-37 40-66 (213)
164 3rjv_A Putative SEL1 repeat pr 31.1 35 0.0012 27.1 3.3 15 21-35 102-116 (212)
165 1xnf_A Lipoprotein NLPI; TPR, 31.1 74 0.0025 24.8 5.2 28 10-37 45-72 (275)
166 2wb7_A PT26-6P; extra chromoso 30.6 74 0.0025 31.0 5.9 31 25-56 449-479 (526)
167 2y3q_A Bacterioferritin; metal 30.6 1.7E+02 0.0059 22.0 7.7 55 25-79 88-145 (158)
168 3mkr_B Coatomer subunit alpha; 30.5 68 0.0023 29.3 5.4 61 9-69 103-166 (320)
169 3as5_A MAMA; tetratricopeptide 30.3 19 0.00065 26.1 1.4 29 7-35 7-35 (186)
170 2fkz_A Bacterioferritin; ferro 30.3 1.7E+02 0.0058 21.8 7.1 54 26-79 89-145 (155)
171 1klx_A Cysteine rich protein B 30.2 64 0.0022 23.9 4.5 15 21-35 38-52 (138)
172 1srv_A Protein (groel (HSP60 c 30.1 35 0.0012 27.9 3.0 68 101-175 10-104 (145)
173 1fch_A Peroxisomal targeting s 30.0 68 0.0023 26.4 5.0 33 5-37 197-246 (368)
174 1na0_A Designed protein CTPR3; 29.6 91 0.0031 20.6 4.8 20 17-36 52-71 (125)
175 3qb9_A Bacterioferritin, BFR; 29.4 2E+02 0.0067 22.3 7.7 55 25-79 90-147 (174)
176 3ieg_A DNAJ homolog subfamily 29.3 75 0.0025 25.6 5.0 14 22-35 51-64 (359)
177 2e2e_A Formate-dependent nitri 29.3 78 0.0027 23.4 4.8 26 12-37 48-73 (177)
178 1jgc_A Bacterioferritin, BFR; 29.0 1.9E+02 0.0063 21.8 7.1 55 25-79 88-145 (161)
179 3o10_A Sacsin; all-helical dom 28.9 79 0.0027 24.8 4.9 39 4-42 12-50 (141)
180 2yhc_A BAMD, UPF0169 lipoprote 28.6 68 0.0023 25.3 4.6 27 10-36 6-32 (225)
181 3cv0_A Peroxisome targeting si 28.4 77 0.0026 25.3 4.9 19 18-36 216-234 (327)
182 2v5f_A Prolyl 4-hydroxylase su 28.1 99 0.0034 21.7 5.0 29 10-38 7-35 (104)
183 4b4t_Q 26S proteasome regulato 27.9 53 0.0018 28.1 4.1 26 11-36 7-32 (434)
184 4e51_A Histidine--tRNA ligase; 27.8 43 0.0015 31.4 3.6 34 165-215 260-293 (467)
185 4aez_C MAD3, mitotic spindle c 27.6 69 0.0024 27.7 4.7 48 8-64 150-197 (223)
186 2vq2_A PILW, putative fimbrial 27.4 1E+02 0.0034 23.0 5.2 26 11-36 11-36 (225)
187 3fvb_A Bacterioferritin; niaid 27.2 1.9E+02 0.0065 23.0 7.1 55 25-79 109-166 (182)
188 1a17_A Serine/threonine protei 26.8 1.7E+02 0.0058 20.6 8.8 18 19-36 92-109 (166)
189 2vsy_A XCC0866; transferase, g 26.8 55 0.0019 30.0 4.1 18 170-187 272-289 (568)
190 4g84_A Histidine--tRNA ligase, 26.7 25 0.00085 32.3 1.8 36 165-215 256-291 (464)
191 1xi4_A Clathrin heavy chain; a 26.6 1.5E+02 0.0053 32.7 8.0 20 13-32 1110-1129(1630)
192 2ln3_A De novo designed protei 26.4 64 0.0022 23.2 3.5 25 166-190 12-36 (83)
193 2vsy_A XCC0866; transferase, g 26.2 28 0.00097 31.9 2.1 14 7-20 41-54 (568)
194 3mkr_A Coatomer subunit epsilo 26.0 64 0.0022 27.1 4.2 14 6-19 147-160 (291)
195 3u4t_A TPR repeat-containing p 26.0 68 0.0023 25.1 4.1 15 5-19 19-33 (272)
196 3qky_A Outer membrane assembly 26.0 60 0.0021 25.9 3.8 29 8-36 15-43 (261)
197 2r5s_A Uncharacterized protein 25.9 36 0.0012 25.8 2.3 26 11-36 9-34 (176)
198 2fo7_A Synthetic consensus TPR 25.7 74 0.0025 21.2 3.8 25 12-36 5-29 (136)
199 3r2k_A Bacterioferritin, BFR; 25.6 2.2E+02 0.0074 21.5 7.2 55 25-79 87-145 (154)
200 2y4t_A DNAJ homolog subfamily 25.5 2E+02 0.0068 24.4 7.3 30 7-36 25-54 (450)
201 2hsb_A Hypothetical UPF0332 pr 25.1 1.8E+02 0.006 21.4 6.2 39 4-42 8-46 (126)
202 1w3b_A UDP-N-acetylglucosamine 25.0 66 0.0023 27.1 4.1 16 21-36 148-163 (388)
203 3ulq_A Response regulator aspa 25.0 1E+02 0.0035 26.1 5.4 22 18-39 194-215 (383)
204 4g85_A Histidine-tRNA ligase, 24.8 27 0.00091 33.0 1.6 34 167-215 311-344 (517)
205 2pzi_A Probable serine/threoni 24.7 77 0.0026 30.4 4.9 15 21-35 480-494 (681)
206 3fp2_A TPR repeat-containing p 24.5 45 0.0015 29.3 3.0 30 7-36 24-53 (537)
207 3fnb_A Acylaminoacyl peptidase 24.4 3.5E+02 0.012 23.5 9.6 51 4-54 65-117 (405)
208 2vh1_A FTSQ, cell division pro 24.4 2.1E+02 0.0071 23.2 7.0 57 144-209 101-158 (220)
209 2r5s_A Uncharacterized protein 24.1 68 0.0023 24.1 3.6 21 16-36 116-136 (176)
210 3osx_A 60 kDa chaperonin; alph 24.0 29 0.00098 29.9 1.5 80 89-175 10-117 (201)
211 2c2l_A CHIP, carboxy terminus 23.9 95 0.0033 25.7 4.8 26 12-37 76-101 (281)
212 3gvy_A Bacterioferritin; iron 23.7 2.4E+02 0.0083 21.4 7.1 55 25-79 88-145 (161)
213 1wao_1 Serine/threonine protei 23.4 1.9E+02 0.0063 26.4 7.1 33 5-37 56-103 (477)
214 2ond_A Cleavage stimulation fa 23.3 1.1E+02 0.0038 25.3 5.2 32 5-36 185-231 (308)
215 3qou_A Protein YBBN; thioredox 23.2 1.1E+02 0.0036 25.5 5.0 28 9-36 118-145 (287)
216 3mkr_A Coatomer subunit epsilo 22.8 1E+02 0.0035 25.8 4.8 22 15-36 207-228 (291)
217 3ieg_A DNAJ homolog subfamily 22.7 1.5E+02 0.0051 23.8 5.7 24 14-37 278-301 (359)
218 3q15_A PSP28, response regulat 22.7 1.2E+02 0.0041 25.7 5.4 26 13-38 187-212 (378)
219 3nf1_A KLC 1, kinesin light ch 22.7 2.8E+02 0.0095 21.7 9.0 31 11-41 156-186 (311)
220 3q49_B STIP1 homology and U bo 22.5 1.9E+02 0.0066 19.8 8.6 17 20-36 89-105 (137)
221 3sf4_A G-protein-signaling mod 22.2 1.4E+02 0.0048 24.6 5.5 27 10-36 269-295 (406)
222 3u4t_A TPR repeat-containing p 22.1 1.2E+02 0.0041 23.7 4.8 22 15-36 81-102 (272)
223 3bee_A Putative YFRE protein; 21.9 1.1E+02 0.0036 21.7 4.2 12 24-35 25-36 (93)
224 3as5_A MAMA; tetratricopeptide 21.8 1.4E+02 0.0047 21.2 4.8 18 19-36 121-138 (186)
225 1zu2_A Mitochondrial import re 21.6 82 0.0028 25.4 3.8 37 5-41 107-144 (158)
226 1kt0_A FKBP51, 51 kDa FK506-bi 21.5 1.1E+02 0.0037 27.7 5.0 26 11-36 320-345 (457)
227 4eqf_A PEX5-related protein; a 21.5 86 0.0029 26.1 4.1 31 6-36 82-127 (365)
228 2vh2_A FTSQ, cell division pro 21.3 1.6E+02 0.0054 24.9 5.8 46 163-209 138-184 (255)
229 3cv0_A Peroxisome targeting si 21.2 1E+02 0.0035 24.6 4.3 24 12-35 25-48 (327)
230 3ulq_A Response regulator aspa 21.2 1.6E+02 0.0054 24.9 5.8 32 8-39 143-174 (383)
231 3k6c_A Uncharacterized protein 20.7 2.5E+02 0.0084 21.2 6.0 43 25-74 31-73 (95)
232 3fp2_A TPR repeat-containing p 20.2 81 0.0028 27.6 3.8 16 5-20 394-409 (537)
233 4etr_A Putative uncharacterize 20.2 3.1E+02 0.011 21.3 8.2 58 6-75 10-67 (153)
234 3lc0_A Histidyl-tRNA synthetas 20.0 36 0.0012 31.9 1.5 35 166-215 265-299 (456)
No 1
>2ymb_A MITD1, MIT domain-containing protein 1; protein transport, membrane, PLD; 3.40A {Homo sapiens}
Probab=100.00 E-value=4.1e-97 Score=665.93 Aligned_cols=237 Identities=43% Similarity=0.792 Sum_probs=148.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcch
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMGNYHE 83 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g~~~~ 83 (246)
...+|++++++||++|++|+|+||+.||++||++|++++++++|+.+|+.++.|+++||+|||+||++|++++++|++++
T Consensus 19 ~~~~Ai~lv~~AVe~D~~g~y~eAl~lY~eaIe~Ll~alk~e~d~~~k~~lr~Ki~eYl~RAE~LK~~L~k~k~~g~~~~ 98 (257)
T 2ymb_A 19 QSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAENIKKYLDQEKEDGKYHK 98 (257)
T ss_dssp ------------------------------------------------------------------------------CC
T ss_pred hHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCceEE
Confidence 45789999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhcCCCCccchHHhHHHhhcccccEEEeeCCcccchhHHhhHHHHHHHHHhcCCCcceEEEeecCCCCCCCccccchH
Q psy1410 84 QIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQFCELAIKNCKNVKRINLLTTYADRPQHSNKTARV 163 (246)
Q Consensus 84 ~~~i~en~~G~sYe~lFg~yl~~~~~~I~ieDPYIr~~hQ~~N~~~f~E~~v~~~~~~~~i~L~T~~d~~~~~~~~~~~~ 163 (246)
|++|++|+||+||++||||||++.|++|+|+|||||.+||++||||||||+|++|++++.|||+|++|++.+ ..
T Consensus 99 ~i~I~~n~~G~sY~~lFg~yl~~~~~~i~i~DPYir~~hQ~~Nl~~f~E~~vk~~~~~~~i~L~T~~d~~~~------~~ 172 (257)
T 2ymb_A 99 QIKIEENATGFSYESLFREYLNETVTEVWIEDPYIRHTHQLYNFLRFCEMLIKRPCKVKTIHLLTSLDEGIE------QV 172 (257)
T ss_dssp EEEECTTCCSCCHHHHSSTTCSTTCCEEEEECSCCCSHHHHHHHHHHHHHHTC--CCCCEEEEEECCCSSTT------HH
T ss_pred EEEECCCCccccHHHHHHHHHhcCCeEEEEeCceecchHHHHHHHHHHHHHhhccCccceEEEEecCCCccc------HH
Confidence 999999999999999999999877999999999999999999999999999999999999999999998764 77
Q ss_pred HHHHHHHHHHHHHhccCcEEEEEecCCccceEEEecCCeEEEeCCcccccccC-CCcccccCCCCCccccceEEEEEecc
Q psy1410 164 KQEENLKQLQESLRKMKITLNINYSNTLHDREIVLSNDWVIKIGRGLDIFCHV-PEFSIGFTDLSLRPCKETVVNIFHRA 242 (246)
Q Consensus 164 ~q~~~l~~i~~sl~~~gi~l~~~~~~tiHDR~I~~dnGw~IkigRGLd~fq~~-~~f~lg~~~~~~R~c~et~v~i~~~~ 242 (246)
+|.++|++|++||+++||+|+|+||+|||||+|+|||||+|+|||||||||+| ++||||+||++||+|+||+|||||++
T Consensus 173 ~q~~~l~~ik~sl~~~gi~~~~~~~~tiHDR~I~~dnGW~IkigRGLD~fq~~~~~f~lg~~d~~lR~C~et~Vdi~~~~ 252 (257)
T 2ymb_A 173 QQSRGLQEIEESLRSHGVLLEVQYSSSIHDREIRFNNGWMIKIGRGLDYFKKPQSRFSLGYCDFDLRPCHETTVDIFHKK 252 (257)
T ss_dssp HHHHHHHHHHHHHHHHTCEEEEEECTTCCCCEEEETTSEEEEESSTTCCBCCCSSTTCTTSSCTTSSCBCCEEEEEEEC-
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEECCCccceeEEecCCcEEEecCccccccCCCCcccccccccccCcceeeEEEEEecc
Confidence 89999999999999999999999999999999999999999999999999999 99999999999999999999999999
Q ss_pred ccCC
Q psy1410 243 SLIK 246 (246)
Q Consensus 243 ~~~~ 246 (246)
++++
T Consensus 253 ~~~~ 256 (257)
T 2ymb_A 253 HTKN 256 (257)
T ss_dssp ----
T ss_pred ccCC
Confidence 9875
No 2
>4a5z_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; 2.30A {Homo sapiens}
Probab=100.00 E-value=7.7e-75 Score=489.94 Aligned_cols=155 Identities=47% Similarity=0.873 Sum_probs=147.9
Q ss_pred cchhhhhcCCCCccchHHhHHHhhcccccEEEeeCCcccchhHHhhHHHHHHHHHhcCCCcceEEEeecCCCCCCCcccc
Q psy1410 81 YHEQIEIANNEKGVTYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQFCELAIKNCKNVKRINLLTTYADRPQHSNKT 160 (246)
Q Consensus 81 ~~~~~~i~en~~G~sYe~lFg~yl~~~~~~I~ieDPYIr~~hQ~~N~~~f~E~~v~~~~~~~~i~L~T~~d~~~~~~~~~ 160 (246)
..++++|++|+||+||++||||||++.|++|+|||||||++||++||||||||+|++|++++.|||+|++|+.++
T Consensus 8 ~~~~~~i~en~tG~SYe~LFg~YL~~~~~~I~IeDPYIR~~hQi~NfvrF~Ellvk~~~~~~~I~L~T~~d~~~~----- 82 (163)
T 4a5z_A 8 HMDQIKIEENATGFSYESLFREYLNETVTEVWIEDPYIRHTHQLYNFLRFCEMLIKRPCKVKTIHLLTSLDEGIE----- 82 (163)
T ss_dssp EEEEEEECTTCCCCCHHHHHGGGCCTTCCEEEEECSCCCSHHHHHHHHHHHHHHHC--CCCCEEEEEECCCCSTT-----
T ss_pred chhheeeecCCccccHHHHHHHHHhCCceEEEEECCccccHHHHHHHHHHHHHHHhcCCCccEEEEEeCCccccC-----
Confidence 356899999999999999999999988999999999999999999999999999999999999999999998744
Q ss_pred chHHHHHHHHHHHHHHhccCcEEEEEecCCccceEEEecCCeEEEeCCcccccccC-CCcccccCCCCCccccceEEEEE
Q psy1410 161 ARVKQEENLKQLQESLRKMKITLNINYSNTLHDREIVLSNDWVIKIGRGLDIFCHV-PEFSIGFTDLSLRPCKETVVNIF 239 (246)
Q Consensus 161 ~~~~q~~~l~~i~~sl~~~gi~l~~~~~~tiHDR~I~~dnGw~IkigRGLd~fq~~-~~f~lg~~~~~~R~c~et~v~i~ 239 (246)
+++|.++|++|++||+++||+|+|+||+|||||+|+|||||+|||||||||||+| ++||||+||++||+|+||+||||
T Consensus 83 -~~~Q~~~L~~ik~sL~~~gI~l~~~fs~tiHDR~I~~dnGW~IkiGRGLD~fq~~~~~fslg~~d~~lR~C~et~Vdi~ 161 (163)
T 4a5z_A 83 -QVQQSRGLQEIEESLRSHGVLLEVQYSSSIHDREIRFNNGWMIKIGRGLDYFKKPQSRFSLGYCDFDLRPCHETTVDIF 161 (163)
T ss_dssp -HHHHHHHHHHHHHHHHHTTCEEEEEECTTCCCCEEEETTSEEEEETTTTCCBCCCSSTTCTTSSCGGGSCBCCEEEEEE
T ss_pred -HHHHHHHHHHHHHHHHHCCCEEEEEeCCCccceEEEecCCeEEEECCCccccccCCCcccccccccccCceeeEEEEEE
Confidence 8999999999999999999999999999999999999999999999999999998 99999999999999999999999
Q ss_pred ec
Q psy1410 240 HR 241 (246)
Q Consensus 240 ~~ 241 (246)
|.
T Consensus 162 ~~ 163 (163)
T 4a5z_A 162 HD 163 (163)
T ss_dssp EC
T ss_pred eC
Confidence 84
No 3
>1wfd_A Hypothetical protein 1500032H18; MIT domain, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Mus musculus} SCOP: a.7.14.1
Probab=99.86 E-value=1.9e-21 Score=150.23 Aligned_cols=82 Identities=35% Similarity=0.539 Sum_probs=79.2
Q ss_pred hHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcc
Q psy1410 3 SSIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMGNYH 82 (246)
Q Consensus 3 ~~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g~~~ 82 (246)
.++++|++++++||++|++|+|+||+.+|++||++|++++++++|+.+|+.|+.|+.+||+|||+||.++++.++.|++|
T Consensus 10 ~~l~~Ai~lv~~Ave~D~~g~y~eAl~~Y~~Aie~l~~alk~e~~~~~k~~l~~K~~eYl~RAE~LK~~l~~~~~~g~~~ 89 (93)
T 1wfd_A 10 SDSTAAVAVLKRAVELDAESRYQQALVCYQEGIDMLLQVLKGTKESSKRCVLRTKISGYMDRAENIKKYLDQEKEDGKSG 89 (93)
T ss_dssp CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCC
Confidence 47889999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred hh
Q psy1410 83 EQ 84 (246)
Q Consensus 83 ~~ 84 (246)
.+
T Consensus 90 ~~ 91 (93)
T 1wfd_A 90 PS 91 (93)
T ss_dssp SS
T ss_pred CC
Confidence 75
No 4
>2w2u_A Hypothetical P60 katanin; hydrolase transport complex, nucleotide-binding, ESCRT, AAA-ATPase, cytokinesis, ATP-binding; 2.20A {Sulfolobus acidocaldarius}
Probab=99.84 E-value=6.1e-21 Score=144.90 Aligned_cols=70 Identities=27% Similarity=0.313 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q psy1410 3 SSIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKL 72 (246)
Q Consensus 3 ~~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l 72 (246)
+++++|++++++||++|++|+|+||+.||++||++|+++++++||+..|+.+++|+.+|++|||+||.+|
T Consensus 14 ~~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~alk~e~d~~~k~~ir~K~~eY~~RAE~LK~~l 83 (83)
T 2w2u_A 14 MLEEMARKYAINAVKADKEGNAEEAITNYKKAIEVLAQLVSLYRDGSTAAIYEQMINEYKRRIEVLKELI 83 (83)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTSSTHHHHHHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 4778999999999999999999999999999999999999999999999999999999999999999864
No 5
>2v6y_A AAA family ATPase, P60 katanin; MIT, VPS4, archaea, AAA-ATPase, ATP-binding, microtubule INT and trafficking domain, nucleotide-binding; HET: SRT; 2.40A {Sulfolobus solfataricus} PDB: 2v6y_B*
Probab=99.83 E-value=6e-21 Score=144.63 Aligned_cols=69 Identities=20% Similarity=0.305 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhh
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKL 72 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l 72 (246)
++++|++++++||++|++|+|+||+.||++||++|+++++++||+..|+.++.|+.+|++|||+||.++
T Consensus 7 ~~~~Ai~lv~~Ave~D~~g~y~eAl~lY~~aie~l~~~lk~e~d~~~k~~ir~K~~eY~~RAE~Lk~~l 75 (83)
T 2v6y_A 7 LEDMARKYAILAVKADKEGKVEDAITYYKKAIEVLSQIIVLYPESVARTAYEQMINEYKKRISYLEKVL 75 (83)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTCTTHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 678999999999999999999999999999999999999999999999999999999999999999988
No 6
>4a5x_A MITD1, MIT domain-containing protein 1; protein transport, ESCRT, cytokinesis, midbody; HET: P15; 1.91A {Homo sapiens}
Probab=99.83 E-value=2.8e-20 Score=142.00 Aligned_cols=77 Identities=36% Similarity=0.612 Sum_probs=69.8
Q ss_pred CchHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy1410 1 MASSIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKK 77 (246)
Q Consensus 1 M~~~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~ 77 (246)
|.---.+|++++++||++|++|+|+||+.+|++||++|+.++++++|+.+|+.|+.|+.+||+|||+||.+|++.++
T Consensus 9 ~~~~~~~A~~lv~~Ave~D~~g~y~eAl~lY~~Aie~ll~alk~e~d~~~k~~lr~K~~eYl~RAE~LK~~l~~~k~ 85 (86)
T 4a5x_A 9 MDPQSTAAATVLKRAVELDSESRYPQALVCYQEGIDLLLQVLKGTKDNTKRCNLREKISKYMDRAENIKKYLDQEKE 85 (86)
T ss_dssp --CHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred CChHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 33445689999999999999999999999999999999999999999999999999999999999999999987654
No 7
>2v6x_A Vacuolar protein sorting-associated protein 4; protein transport, vacuole, endosome, transport, ESCRT-III, VPS2, VPS4, SKD1, VPS4B, VPS4A; 1.98A {Saccharomyces cerevisiae}
Probab=99.81 E-value=1.4e-19 Score=136.83 Aligned_cols=76 Identities=28% Similarity=0.421 Sum_probs=72.2
Q ss_pred chHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhh
Q psy1410 2 ASSIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKK 77 (246)
Q Consensus 2 ~~~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~ 77 (246)
.+++++|+.++++||+.|++|+|+||+.+|.+||++|++++++++|+..|+.|+.|+.+|++|||+||.++++.+.
T Consensus 7 ~~~l~~A~~l~~~Av~~D~~g~y~eAl~~Y~~aie~l~~a~k~e~~~~~k~~l~~k~~eYl~RAE~Lk~~l~~~~~ 82 (85)
T 2v6x_A 7 GDFLTKGIELVQKAIDLDTATQYEEAYTAYYNGLDYLMLALKYEKNPKSKDLIRAKFTEYLNRAEQLKKHLESEEA 82 (85)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 3588999999999999999999999999999999999999999999999999999999999999999999976543
No 8
>2cpt_A SKD1 protein, vacuolar sorting protein 4B; MIT, helix bundle, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: a.7.14.1
Probab=99.76 E-value=2.8e-18 Score=137.82 Aligned_cols=74 Identities=32% Similarity=0.442 Sum_probs=70.7
Q ss_pred hHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcC-CChhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy1410 3 SSIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGL-SNKGDQQKIRDKIETYINRAEVLKGKLDEKK 76 (246)
Q Consensus 3 ~~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e-~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k 76 (246)
+++++|++++++||++|++|+|+|||.+|++||++|+.+++++ +|+..|+.|+.|+.+||+|||+||.+|+...
T Consensus 13 ~~l~kAi~lv~~Ave~D~ag~y~eAl~lY~~Aie~l~~alk~e~~~~~~k~~lr~K~~eYl~RAE~LK~~l~~~~ 87 (117)
T 2cpt_A 13 PNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKNKE 87 (117)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHHHHHHHHhccCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 6789999999999999999999999999999999999999999 7898899999999999999999999997654
No 9
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=99.44 E-value=8.8e-15 Score=138.19 Aligned_cols=73 Identities=33% Similarity=0.448 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcC-CChhHHHHHHHHHHHHHHHHHHHHHhhhhhh
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGL-SNKGDQQKIRDKIETYINRAEVLKGKLDEKK 76 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e-~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k 76 (246)
++++|++++++||++|++|+|+||+.||++||++|++++++| +|++.|+.|+.|+.+||+|||+||.++++.+
T Consensus 7 ~~~~A~~~~~~Av~~D~~g~~~eA~~~Y~~a~~~l~~~~k~e~~~~~~k~~ir~k~~ey~~Rae~Lk~~l~k~~ 80 (444)
T 2zan_A 7 NLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKCTEYLDRAEKLKEYLKKKE 80 (444)
T ss_dssp --------------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHhhccChHHHHHHHHHHHHHHHHHHHHHHHhhccc
Confidence 678999999999999999999999999999999999999999 8888899999999999999999999997644
No 10
>2dl1_A Spartin; SPG20, MIT, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.47 E-value=0.0011 Score=53.00 Aligned_cols=69 Identities=17% Similarity=0.329 Sum_probs=52.8
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCC------h--hHHHHHHHHHHHHHHHHHHHHHhhh
Q psy1410 5 IELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSN------K--GDQQKIRDKIETYINRAEVLKGKLD 73 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d------~--~kK~~lr~Ki~eYm~RAE~LK~~l~ 73 (246)
-.+|..++.+|++.|+.|+-.+|+.+|++||+.|...+.-..+ + ..-..++.||.+-+.-|..=-..|.
T Consensus 19 h~~AF~~Is~AL~~DE~g~k~~Al~lYk~GI~eLe~Gl~I~~~~~~~~g~~we~Ar~lq~KM~~nL~~v~~RL~~Le 95 (116)
T 2dl1_A 19 YKKAFLFVNKGLNTDELGQKEEAKNYYKQGIGHLLRGISISSKESEHTGPGWESARQMQQKMKETLQNVRTRLEILE 95 (116)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHSSCCCCTTCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhcCCHHHHHHHHHHHHHHHHHhccccccCCCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4689999999999999999999999999999999999976543 1 2344577777776655444433443
No 11
>2crb_A Nuclear receptor binding factor 2; NRBF-2, MIT domain, helix bundle, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: a.7.16.1
Probab=97.14 E-value=0.0074 Score=46.62 Aligned_cols=73 Identities=14% Similarity=0.202 Sum_probs=61.7
Q ss_pred CchHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy1410 1 MASSIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLD 73 (246)
Q Consensus 1 M~~~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~ 73 (246)
|.+.++.|=..-.+|-.+=+.|+|+||+.|++.|..+|..++|...++.....|.-.-.-+|.-.+-|++..+
T Consensus 8 ~~spLn~AH~~~RrAe~ll~~gkydeAIech~kAa~yL~eAmkltqs~qa~~SLqLQrd~HlKQ~~liq~r~k 80 (97)
T 2crb_A 8 MEGPLNLAHQQSRRADRLLAAGKYEEAISCHRKATTYLSEAMKLTESEQAHLSLELQRDSHMKQLLLIQERWK 80 (97)
T ss_dssp CTTHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhhhHhhhHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4457788888899999999999999999999999999999999999998888777666666776666666554
No 12
>3eab_A Spastin; spastin, MIT, ESCRT, alternative splicing, ATP- binding, cytoplasm, disease mutation, hereditary spastic paraplegia, nucleotide-binding; 2.50A {Homo sapiens}
Probab=97.12 E-value=0.0016 Score=49.75 Aligned_cols=61 Identities=21% Similarity=0.326 Sum_probs=49.7
Q ss_pred HHHHHHHHHHHHHHHhc---CCHHHHHHHHHHHHHHHHHHhhcCCCh-----hHHHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDER---GRWTESLTFYQDGVTELLKHVRGLSNK-----GDQQKIRDKIETYINRA 65 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~---g~y~EAl~lY~eaIe~Ll~~lk~e~d~-----~kK~~lr~Ki~eYm~RA 65 (246)
-.+|.+++.+|+..|+. |+-++|+.+|++||+-|...+.-..+. ..-..++.||.+=+.-|
T Consensus 13 h~~AF~~Is~aL~~DE~~~~G~k~~A~~~YkkGi~eL~~Gi~V~~~g~G~~we~Ar~LQ~KM~~nL~~v 81 (89)
T 3eab_A 13 HKQAFEYISIALRIDEDEKAGQKEQAVEWYKKGIEELEKGIAVIVTGQGEQCERARRLQAKMMTNLVMA 81 (89)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSSGGGSHHHHHHHHHHHHHHHHSCCCCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcccCCCHHHHHHHHHHHHHHHHhhcCCccCCCChhHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999 999999999999999999999765332 33455777777766544
No 13
>2xze_A STAM-binding protein; hydrolase-protein transport complex; 1.75A {Homo sapiens}
Probab=95.88 E-value=0.04 Score=45.09 Aligned_cols=70 Identities=16% Similarity=0.212 Sum_probs=55.9
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCC------hhHHHHHHHHHHHH-HHHHHHHHHhhhh
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSN------KGDQQKIRDKIETY-INRAEVLKGKLDE 74 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d------~~kK~~lr~Ki~eY-m~RAE~LK~~l~~ 74 (246)
.+..|..+++.|-.+-..|+++.|+.+|...+.+++..+..-|| +..+. +..++..= +.++|.||..|..
T Consensus 36 ylrta~~llr~A~~y~~egd~e~AYily~R~~~L~~e~IpkHpdy~~~~~~~~~~-~l~~l~~~~~~~lE~LK~~L~~ 112 (146)
T 2xze_A 36 YFRSGVEIIRMASIYSEEGNIEHAFILYNKYITLFIEKLPKHRDYKSAVIPEKKD-TVKKLKEIAFPKAEELKAELLK 112 (146)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHTTGGGSTTTTTCCCTTHHH-HHHHHHHTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHcccCccchhhhhHHHHH-HHHHHHHHhHHHHHHHHHHHHH
Confidence 46789999999999999999999999999999999977754333 33344 44455554 8999999998875
No 14
>2rpa_A Katanin P60 ATPase-containing subunit A1; AAA ATPase, ATP-binding, cell cycle, cell division, cytoplas hydrolase, microtubule; NMR {Mus musculus}
Probab=95.59 E-value=0.08 Score=39.31 Aligned_cols=67 Identities=15% Similarity=0.157 Sum_probs=52.7
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHh
Q psy1410 5 IELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGK 71 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~ 71 (246)
+..-.+-++.|-++=-.|+|+.|+.+|+.+++.+-..+..-.||..|..-.+--.+-.+-.|.+|..
T Consensus 9 ~~~i~e~~k~ARe~Al~GnYdta~~yY~g~~~qI~k~l~~~~d~~~r~kW~~~~~ei~~E~~~Vk~i 75 (78)
T 2rpa_A 9 LQMIVENVKLAREYALLGNYDSAMVYYQGVLDQMNKYLYSVKDTHLRQKWQQVWQEINVEAKQVKDI 75 (78)
T ss_dssp SHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcChHHHHHHHHHHHHHHHHHHHhcCCHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 3445677888888889999999999999999999999988899999887666555545555555543
No 15
>2a9u_A Ubiquitin carboxyl-terminal hydrolase 8; coil-COIL, protease, SH3-binding, thiol protease, UBL conjugation pathway, structural genomics; 2.10A {Homo sapiens} SCOP: a.118.23.1
Probab=95.48 E-value=0.074 Score=43.64 Aligned_cols=71 Identities=15% Similarity=0.050 Sum_probs=55.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCC-----hhHHHH-HHHHHHHHHHHHHHHHHhhhhh
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSN-----KGDQQK-IRDKIETYINRAEVLKGKLDEK 75 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d-----~~kK~~-lr~Ki~eYm~RAE~LK~~l~~~ 75 (246)
....|..+++.|-.+...|+.+.|+.+|..-+.++. .+..-|| +..++. ....+..-+++||.||..|...
T Consensus 38 y~rsa~~L~r~A~~y~~EGd~E~AYilymRy~~L~~-kIpkHpdyk~~~~~~k~~l~k~~~~~vl~~lE~LK~~L~~r 114 (144)
T 2a9u_A 38 YVHSALKIFKTAEECRLDRDEERAYVLYMKYVTVYN-LIKKRPDFKQQQDYFHSILGPGNIKKAVEEAERLSESLKLR 114 (144)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHTTSHHHHHTHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HHhcCcchhhhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHH
Confidence 357899999999999999999999999999999884 4432222 222333 3566778899999999999764
No 16
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=93.22 E-value=0.31 Score=40.22 Aligned_cols=80 Identities=18% Similarity=0.145 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcchhhhhcC
Q psy1410 10 FLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMGNYHEQIEIAN 89 (246)
Q Consensus 10 ~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g~~~~~~~i~e 89 (246)
-...+|..+-+-|+|+||+.+|..||++|...+...||.. ..-++.|.+|+..+..+=+-......+.+-+++..
T Consensus 59 a~~n~g~al~~Lgr~~eAl~~~~kAL~l~n~~~e~~pd~~-----~A~~~~~~~rG~aL~~lgr~eEAl~~y~kAlel~p 133 (159)
T 2hr2_A 59 CHAGLAEALAGLRSFDEALHSADKALHYFNRRGELNQDEG-----KLWISAVYSRALALDGLGRGAEAMPEFKKVVEMIE 133 (159)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHCCTTSTHH-----HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhccccCCCchH-----HHHHHHHHhHHHHHHHCCCHHHHHHHHHHHHhcCC
Confidence 4445555555569999999999999999998885555432 22233446666665543222222233444445544
Q ss_pred CCCcc
Q psy1410 90 NEKGV 94 (246)
Q Consensus 90 n~~G~ 94 (246)
++.|.
T Consensus 134 ~d~~~ 138 (159)
T 2hr2_A 134 ERKGE 138 (159)
T ss_dssp HCCSC
T ss_pred CcHHH
Confidence 44443
No 17
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=90.21 E-value=2.2 Score=32.27 Aligned_cols=39 Identities=21% Similarity=0.289 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHV 42 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~l 42 (246)
.++.|..+..+|..+=+.|+|++|+.+|.+||+++-...
T Consensus 7 ~~~~a~~~~~~G~~~~~~~~~~~A~~~y~~al~~~~~~~ 45 (162)
T 3rkv_A 7 KLKSVEALRQKGNELFVQKDYKEAIDAYRDALTRLDTLI 45 (162)
T ss_dssp -CHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhc
Confidence 345788889999999999999999999999999766554
No 18
>1ug7_A 2610208M17RIK protein; hypothetical protein FLJ12806, four helical UP-and-DOWN bundle, structural genomics; NMR {Mus musculus} SCOP: a.24.24.1
Probab=88.14 E-value=8.1 Score=31.08 Aligned_cols=84 Identities=18% Similarity=0.222 Sum_probs=54.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCC-----ChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhccC
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLS-----NKGDQQKIRDKIETYINRAEVLKGKLDEKKKMGN 80 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~-----d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g~ 80 (246)
++=..-+++|+++|.=|+..||..=|+.=-..+-..+.... .+..++.|.+-+.----|++.|..
T Consensus 17 ~kW~~sl~Ka~dfDsWGQvvEA~deY~~La~~lkk~~~s~~~~~~fte~qkk~i~KiatcL~lRsk~Lq~---------- 86 (128)
T 1ug7_A 17 QRWGASLRRGADFDSWGQLVEAIDEYQILARHLQKEAQAQHNNSEFTEEQKKTIGKIATCLELRSAALQS---------- 86 (128)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHTCSSSCCSSCHHHHHHHHHHHHHHHHHHHHHHC----------
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHHHHHHHHHHHHHh----------
Confidence 34556789999999999999999999864333444443221 134455444433333347776621
Q ss_pred cchhhhhcCCCCccchHHh--HHHhhcc
Q psy1410 81 YHEQIEIANNEKGVTYEKL--FGRFLDE 106 (246)
Q Consensus 81 ~~~~~~i~en~~G~sYe~l--Fg~yl~~ 106 (246)
..++.|++++.+ ..|+|.+
T Consensus 87 -------~~~~~gi~led~K~l~~~lk~ 107 (128)
T 1ug7_A 87 -------TQSQEEFKLEDLKKLEPILKN 107 (128)
T ss_dssp -------CSCCCSCCSHHHHTHHHHHHT
T ss_pred -------ccCCCCCCHHHHHHHHHHHHH
Confidence 134788899987 8888876
No 19
>1byr_A Protein (endonuclease); phosphodiesterase,; 2.00A {Salmonella typhimurium} SCOP: d.136.1.1 PDB: 1bys_A
Probab=86.96 E-value=8.3 Score=29.55 Aligned_cols=99 Identities=11% Similarity=0.046 Sum_probs=61.8
Q ss_pred chHHhHHHhhcccccEEEeeCCcccchhHHhhHHHHHHHHHhcCCCcceEEEeecCCCCCCCccccchHHHHHHHHHHHH
Q psy1410 95 TYEKLFGRFLDENVEQIDVTDPYIHNKHQCYNFLQFCELAIKNCKNVKRINLLTTYADRPQHSNKTARVKQEENLKQLQE 174 (246)
Q Consensus 95 sYe~lFg~yl~~~~~~I~ieDPYIr~~hQ~~N~~~f~E~~v~~~~~~~~i~L~T~~d~~~~~~~~~~~~~q~~~l~~i~~ 174 (246)
+....+-.-+++.-++|+|.-||+.. . ++.+.|......=..|++++...... .......+..
T Consensus 14 ~~~~~~~~~i~~A~~~I~i~~~~~~~----~---~i~~aL~~a~~rGV~Vril~~~~~~~-------~~~~~~~~~~--- 76 (155)
T 1byr_A 14 SARVLVLSAIDSAKTSIRMMAYSFTA----P---DIMKALVAAKKRGVDVKIVIDERGNT-------GRASIAAMNY--- 76 (155)
T ss_dssp HHHHHHHHHHHHCSSEEEEEESSBCC----H---HHHHHHHHHHHTTCEEEEEEESTTCC-------SHHHHHHHHH---
T ss_pred cHHHHHHHHHHHHhhEEEEEEEEeCC----H---HHHHHHHHHHHCCCEEEEEEeCcccc-------ccccHHHHHH---
Confidence 44555566666645789999999954 2 34444444333335799999765432 1122334444
Q ss_pred HHhccCcEEEEEe-cCCccceEEEecCCeEEEeCCccc
Q psy1410 175 SLRKMKITLNINY-SNTLHDREIVLSNDWVIKIGRGLD 211 (246)
Q Consensus 175 sl~~~gi~l~~~~-~~tiHDR~I~~dnGw~IkigRGLd 211 (246)
|...||.+.+.. ...+|..-+++|+.|.+.=+-.++
T Consensus 77 -L~~~gv~v~~~~~~~~~H~K~~iiD~~~~~iGS~N~~ 113 (155)
T 1byr_A 77 -IANSGIPLRTDSNFPIQHDKVIIVDNVTVETGSFNFT 113 (155)
T ss_dssp -HHHTTCCEEEECSSSCCCCCEEEETTTEEEEESCCBS
T ss_pred -HHHCCCeEEEcCCcccccceEEEECCCEEEEECCCCC
Confidence 445788876532 246999999999888776666555
No 20
>2hr2_A Hypothetical protein; alpha-alpha superhelix fold, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; 2.54A {Chlorobium tepidum} SCOP: a.118.8.8
Probab=86.79 E-value=0.86 Score=37.51 Aligned_cols=35 Identities=14% Similarity=0.017 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDERGRWTESLTFYQDGVTELL 39 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll 39 (246)
...|-.+...+..+-+.|+|++|+.+|.+||++.-
T Consensus 8 ~~~a~~~~~~G~~l~~~g~~eeAi~~Y~kAL~l~p 42 (159)
T 2hr2_A 8 VVGAYLALSDAQRQLVAGEYDEAAANCRRAMEISH 42 (159)
T ss_dssp HHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHhhCC
Confidence 35788899999999999999999999999998543
No 21
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=85.63 E-value=3.6 Score=39.06 Aligned_cols=55 Identities=13% Similarity=0.019 Sum_probs=41.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETY 61 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eY 61 (246)
+-|..+..-|.-+...|+|+||..+|++|++.+...+ +...|...+.+.....-|
T Consensus 391 ~~a~~l~nLa~~~~~~G~~~eA~~~~~~Al~i~~~~l-G~~Hp~~~~~~~~l~~~~ 445 (490)
T 3n71_A 391 QLGMAVMRAGLTNWHAGHIEVGHGMICKAYAILLVTH-GPSHPITKDLEAMRMQTE 445 (490)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-CTTSHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHh-CCCChHHHHHHHHHHHHH
Confidence 3566777788888999999999999999999887776 556676666554333333
No 22
>2ff4_A Probable regulatory protein EMBR; winged-helix, tetratricopeptide repeat, beta-sandwich, trans; HET: DNA TPO; 1.90A {Mycobacterium tuberculosis} SCOP: a.4.6.1 a.118.8.3 b.26.1.2 PDB: 2fez_A*
Probab=85.31 E-value=1.3 Score=40.54 Aligned_cols=103 Identities=12% Similarity=0.024 Sum_probs=66.9
Q ss_pred hcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHH--H------HHHHHHHHHhhhhhhhccCcchhhhhcCCC
Q psy1410 20 ERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIET--Y------INRAEVLKGKLDEKKKMGNYHEQIEIANNE 91 (246)
Q Consensus 20 ~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~e--Y------m~RAE~LK~~l~~~k~~g~~~~~~~i~en~ 91 (246)
..|+..+|+..|...-+.|..-+-.+|++..++.+..-... - -.-++.++..+...........+..+.++.
T Consensus 217 ~~Gr~~~Al~~y~~~r~~L~~eLG~~P~~~l~~l~~~il~~~~~~~~~~~~~~l~~i~~~L~~~~~~~~~~~~~~l~~~~ 296 (388)
T 2ff4_A 217 LSDRQSDALGAYRRVKTTLADDLGIDPGPTLRALNERILRQQPLDAKKSAKTTAAGTVTVLDQRTMASGQQAVAYLHDIA 296 (388)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHBCTTSSBCCCEEEETT
T ss_pred HcCCHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHcCCCCCCCCCCccccchhhhHhhcccccCCCCCeEEEEECC
Confidence 58999999999999999999999889999998877663211 0 112555666665544433333444455566
Q ss_pred CccchHHhHHHhhccc--ccEEEeeCCcccchh
Q psy1410 92 KGVTYEKLFGRFLDEN--VEQIDVTDPYIHNKH 122 (246)
Q Consensus 92 ~G~sYe~lFg~yl~~~--~~~I~ieDPYIr~~h 122 (246)
.|..|.=-=+++.-|+ -..|.+.||+|...|
T Consensus 297 ~g~~~~l~~~~~~iGR~~~~di~l~~~~vSr~H 329 (388)
T 2ff4_A 297 SGRGYPLQAAATRIGRLHDNDIVLDSANVSRHH 329 (388)
T ss_dssp TCCEEECCSSEEEEESSTTSSEECCCTTSCTTC
T ss_pred CCcEEEECCCCEEEecCCCCeEEECCCccChhH
Confidence 6766641112222221 147899999998777
No 23
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=84.91 E-value=0.96 Score=33.66 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=15.9
Q ss_pred HHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 15 AVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 15 AVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
|.-+-+.|+|++|+..|.+||++
T Consensus 49 g~~~~~~~~~~~A~~~~~~al~~ 71 (127)
T 4gcn_A 49 AAVYFEEKKFAECVQFCEKAVEV 71 (127)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHHh
Confidence 33344478888888888888764
No 24
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=83.72 E-value=3.3 Score=32.42 Aligned_cols=17 Identities=6% Similarity=0.272 Sum_probs=9.8
Q ss_pred hcCCHHHHHHHHHHHHH
Q psy1410 20 ERGRWTESLTFYQDGVT 36 (246)
Q Consensus 20 ~~g~y~EAl~lY~eaIe 36 (246)
..|+|++|+.+|.+|+.
T Consensus 82 ~~g~~~~Ai~~~~~al~ 98 (151)
T 3gyz_A 82 IKEQFQQAADLYAVAFA 98 (151)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HHccHHHHHHHHHHHHh
Confidence 35666666666655553
No 25
>4gcn_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; HET: PGE; 1.85A {Caenorhabditis elegans}
Probab=82.30 E-value=5.7 Score=29.27 Aligned_cols=34 Identities=6% Similarity=-0.035 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
+.+.|...-..+..+=+.|+|++|+.+|.+||++
T Consensus 4 ~~d~A~a~~~lG~~~~~~~~~~~A~~~y~~Al~~ 37 (127)
T 4gcn_A 4 MTDAAIAEKDLGNAAYKQKDFEKAHVHYDKAIEL 37 (127)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3456777777888889999999999999999974
No 26
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=81.02 E-value=6.3 Score=36.47 Aligned_cols=48 Identities=6% Similarity=-0.063 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHH
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKI 54 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~l 54 (246)
.-|..+..-|.-+...|+|+||+.+|++|++.+...+ +...|..++.+
T Consensus 369 ~~a~~l~nLa~~~~~~g~~~eA~~~~~~Al~i~~~~l-G~~Hp~~~~~~ 416 (429)
T 3qwp_A 369 VRGVQVMKVGKLQLHQGMFPQAMKNLRLAFDIMRVTH-GREHSLIEDLI 416 (429)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHT-CTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhc-CCCChHHHHHH
Confidence 4577778888889999999999999999999877765 66667776644
No 27
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=80.03 E-value=11 Score=30.87 Aligned_cols=67 Identities=15% Similarity=0.033 Sum_probs=44.3
Q ss_pred HHHHHHHHHHHHHHHhcC-------------------CHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDERG-------------------RWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRA 65 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~g-------------------~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RA 65 (246)
.+.|+....+|+++|-.- ++.+|+..|.+|+++|.+++...|+.. .-.+..+...+|
T Consensus 62 ~~eAi~~le~AL~ldP~~~~A~~~LG~ay~~lg~l~P~~~~a~g~~~eA~~~~~kAl~l~P~~~----~y~~al~~~~ka 137 (158)
T 1zu2_A 62 IQEAITKFEEALLIDPKKDEAVWCIGNAYTSFAFLTPDETEAKHNFDLATQFFQQAVDEQPDNT----HYLKSLEMTAKA 137 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCTTCH----HHHHHHHHHHTH
T ss_pred HHHHHHHHHHHHHhCcCcHHHHHHHHHHHHHhcccCcchhhhhccHHHHHHHHHHHHHhCCCCH----HHHHHHHHHHhC
Confidence 568999999999998543 234455567777777777777766532 223344556777
Q ss_pred HHHHHhhhhh
Q psy1410 66 EVLKGKLDEK 75 (246)
Q Consensus 66 E~LK~~l~~~ 75 (246)
-++--.+.++
T Consensus 138 ~el~~~~~~~ 147 (158)
T 1zu2_A 138 PQLHAEAYKQ 147 (158)
T ss_dssp HHHHHHHHHS
T ss_pred HhccCccccc
Confidence 7776666554
No 28
>3n71_A Histone lysine methyltransferase SMYD1; heart development, transcription; HET: SFG MES; 2.30A {Mus musculus}
Probab=79.99 E-value=3.5 Score=39.12 Aligned_cols=58 Identities=10% Similarity=0.032 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHH
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYI 62 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm 62 (246)
.+..|..++.+|..+..+|+|+||+.+|+++++....++ ++..|..-..+..-..-|.
T Consensus 305 ~l~~a~~~le~a~~~~~qg~~~eA~~l~~~aL~~~~~~l-g~~Hp~~a~~~~nLa~~y~ 362 (490)
T 3n71_A 305 MIQFSKDTLEKIDKARSEGLYHEVVKLCRECLEKQEPVF-ADTNLYVLRLLSIASEVLS 362 (490)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHTTTB-CTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHHHHHHHHH
Confidence 345677788889999999999999999999999777666 5556666555555444443
No 29
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=79.88 E-value=2.7 Score=29.64 Aligned_cols=25 Identities=16% Similarity=0.165 Sum_probs=13.4
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 12 LIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 12 l~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
...|..+-..|+|++|+.+|+++++
T Consensus 11 ~~lg~~~~~~g~~~~A~~~~~~al~ 35 (100)
T 3ma5_A 11 YALAQEHLKHDNASRALALFEELVE 35 (100)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3444455555555555555555554
No 30
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=79.18 E-value=3.4 Score=29.57 Aligned_cols=31 Identities=13% Similarity=0.270 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.|-.+...|..+-+.|+|++|+.+|.+||+.
T Consensus 3 ~a~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 33 (126)
T 3upv_A 3 KAEEARLEGKEYFTKSDWPNAVKAYTEMIKR 33 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcCHHHHHHHHHHHHHh
Confidence 5667788899999999999999999999873
No 31
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=76.99 E-value=4 Score=30.26 Aligned_cols=31 Identities=23% Similarity=0.336 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.|-..-.++..+=+.|+|++|+.+|.+||++
T Consensus 12 ~a~~~~~~G~~~~~~g~~~~A~~~~~~al~~ 42 (126)
T 4gco_A 12 LAQEEKNKGNEYFKKGDYPTAMRHYNEAVKR 42 (126)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 4556667888888999999999999999863
No 32
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=75.15 E-value=5.1 Score=27.33 Aligned_cols=31 Identities=16% Similarity=0.161 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.+-.+...|..+-..|+|++|+.+|.+|++.
T Consensus 3 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 33 (111)
T 2l6j_A 3 QFEKQKEQGNSLFKQGLYREAVHCYDQLITA 33 (111)
T ss_dssp HHHHHHHHHHHHHTTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCCHHHHHHHHHHHHhc
Confidence 3556677888888999999999999998864
No 33
>4gco_A Protein STI-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, tetratricopeptide repeat domain; 1.60A {Caenorhabditis elegans}
Probab=74.50 E-value=4.6 Score=29.91 Aligned_cols=23 Identities=17% Similarity=0.147 Sum_probs=15.9
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 14 RAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 14 rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.|.-+-+.|++++|+..|.+||+
T Consensus 53 ~~~~~~~~~~~~~A~~~~~~al~ 75 (126)
T 4gco_A 53 RAACLTKLMEFQRALDDCDTCIR 75 (126)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HhhHHHhhccHHHHHHHHHHHHH
Confidence 33444457888888888888775
No 34
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=74.20 E-value=18 Score=33.60 Aligned_cols=48 Identities=10% Similarity=0.013 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRD 56 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~ 56 (246)
|..+-.-|..+...|+|++|+.+|+++++....++ ++..|..-..+..
T Consensus 340 a~~~~nLa~~y~~~g~~~eA~~~~~~aL~i~~~~l-G~~Hp~~a~~l~n 387 (433)
T 3qww_A 340 LHMMYQAMGVCLYMQDWEGALKYGQKIIKPYSKHY-PVYSLNVASMWLK 387 (433)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHS-CSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHc-CCCChHHHHHHHH
Confidence 33444456667779999999999999999888776 4456655444433
No 35
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=74.18 E-value=11 Score=33.62 Aligned_cols=36 Identities=8% Similarity=0.080 Sum_probs=31.4
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDERGRWTESLTFYQDGVTELLK 40 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~ 40 (246)
.+.|..+...|..+-+.|+|++|+.+|.+||+++-.
T Consensus 220 ~~~a~~~~~~g~~~~~~g~~~~Ai~~y~kAl~~~~~ 255 (370)
T 1ihg_A 220 LLISEDLKNIGNTFFKSQNWEMAIKKYTKVLRYVEG 255 (370)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHhhc
Confidence 456777889999999999999999999999986654
No 36
>3c3r_A Programmed cell death 6-interacting protein; ALIX BRO1 CHMP4C amphipathic-helix, apoptosis, HOST-virus interaction, protein transport, transport; 2.02A {Homo sapiens} PDB: 2oew_A 3c3o_A 3c3q_A
Probab=73.73 E-value=11 Score=34.64 Aligned_cols=67 Identities=10% Similarity=0.070 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLD 73 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~ 73 (246)
+|+..-..|..++++++|.||+.+++.|.+.+-.+.+.......-+.+..+|..-+++||+-=+.+-
T Consensus 274 ~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~~~~~~l~~l~~~i~~~l~~a~kdNd~IY 340 (380)
T 3c3r_A 274 QANAEYHQSILAKQQKKFGEEIARLQHAAELIKTVASRYDEYVNVKDFSDKINRALAAAKKDNDFIY 340 (380)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHCTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHhcchHhHHHHHHHHHHHHHHHHHhhCeec
Confidence 5666677899999999999999999999999888776543333335578888888898888888774
No 37
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=70.90 E-value=5.6 Score=30.12 Aligned_cols=17 Identities=6% Similarity=0.087 Sum_probs=9.3
Q ss_pred hcCCHHHHHHHHHHHHH
Q psy1410 20 ERGRWTESLTFYQDGVT 36 (246)
Q Consensus 20 ~~g~y~EAl~lY~eaIe 36 (246)
+.|+|++|+.+|.++|+
T Consensus 43 ~~~~~~~A~~~~~~al~ 59 (150)
T 4ga2_A 43 EAKEYDLAKKYICTYIN 59 (150)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 45555555555555553
No 38
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=70.63 E-value=9.7 Score=28.74 Aligned_cols=31 Identities=6% Similarity=0.161 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.+.-....|..+-+.|+|++|+.+|++||+.
T Consensus 4 ~~~iy~~lG~~~~~~g~~~~A~~~~~~al~~ 34 (184)
T 3vtx_A 4 TTTIYMDIGDKKRTKGDFDGAIRAYKKVLKA 34 (184)
T ss_dssp CHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 3455667788888899999999999998863
No 39
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=70.35 E-value=6.8 Score=28.67 Aligned_cols=16 Identities=0% Similarity=-0.141 Sum_probs=8.9
Q ss_pred cCCHHHHHHHHHHHHH
Q psy1410 21 RGRWTESLTFYQDGVT 36 (246)
Q Consensus 21 ~g~y~EAl~lY~eaIe 36 (246)
.|++++|+.+|..|++
T Consensus 64 ~g~~~~A~~~~~~al~ 79 (121)
T 1hxi_A 64 NEKDGLAIIALNHARM 79 (121)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 4555555555555554
No 40
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=69.90 E-value=15 Score=32.11 Aligned_cols=59 Identities=8% Similarity=0.097 Sum_probs=38.4
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHH------------HHHHHHHHHHHHHHHHh
Q psy1410 13 IRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKI------------RDKIETYINRAEVLKGK 71 (246)
Q Consensus 13 ~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~l------------r~Ki~eYm~RAE~LK~~ 71 (246)
..|.-.-..|+|++|+.+|++|++++-..-..+.++..-..+ -.+..+|.++|.+|...
T Consensus 56 ~Lg~~~~~~G~~~eAl~~~~kAl~~~~~~~~~~~~~~~~~~~~nla~~y~~~g~~~~A~~~~~ka~~i~~~ 126 (472)
T 4g1t_A 56 LLAYLKHLKGQNEAALECLRKAEELIQQEHADQAEIRSLVTWGNYAWVYYHMGRLSDVQIYVDKVKHVCEK 126 (472)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHHHHSGGGCTTTTHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHCCCHHHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHhHh
Confidence 356677789999999999999999766554433344332221 13456677777766543
No 41
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=68.96 E-value=8.1 Score=25.82 Aligned_cols=22 Identities=23% Similarity=0.513 Sum_probs=11.1
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH
Q psy1410 15 AVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 15 AVe~D~~g~y~EAl~lY~eaIe 36 (246)
|..+-..|++++|+.+|.++++
T Consensus 13 ~~~~~~~~~~~~A~~~~~~a~~ 34 (112)
T 2kck_A 13 GVLQYDAGNYTESIDLFEKAIQ 34 (112)
T ss_dssp HHHHHSSCCHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHHHH
Confidence 3344445555555555555543
No 42
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=68.63 E-value=8.1 Score=29.03 Aligned_cols=32 Identities=9% Similarity=0.174 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
..+..+...|..+-..|+|++|+.+|.+++++
T Consensus 9 ~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 40 (164)
T 3sz7_A 9 PESDKLKSEGNAAMARKEYSKAIDLYTQALSI 40 (164)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 46677888899999999999999999999874
No 43
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=67.83 E-value=7.4 Score=26.20 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=26.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.+-.+...|..+-..|++++|+.+|.+++..
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 33 (118)
T 1elw_A 3 QVNELKEKGNKALSVGNIDDALQCYSEAIKL 33 (118)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcccHHHHHHHHHHHHHH
Confidence 4566778888888999999999999998863
No 44
>3rau_A Tyrosine-protein phosphatase non-receptor type 23; BRO1 domain, hydrolase; 1.95A {Homo sapiens}
Probab=67.74 E-value=26 Score=31.98 Aligned_cols=66 Identities=17% Similarity=0.149 Sum_probs=47.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCC--ChhHHH---HHHHHHHHHHHHHHHHHHhh
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLS--NKGDQQ---KIRDKIETYINRAEVLKGKL 72 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~--d~~kK~---~lr~Ki~eYm~RAE~LK~~l 72 (246)
+|+..-..|..++++++|.||+.+++.|.+.+-.+.+..+ .....+ .+...|+.-+++||+==+.+
T Consensus 251 ~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~k~~~~~~~~~~~~~~~~i~~~l~~aekdNd~I 321 (363)
T 3rau_A 251 AAVAHLHMGKQAEEQQKFGERVAYFQSALDKLNEAIKLAKGQPDTVQDALRFTMDVIGGKYNSAKKDNDFI 321 (363)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHHHhccCcC
Confidence 5677778899999999999999999999999988886543 222332 23345666666666555554
No 45
>3rkv_A Putative peptidylprolyl isomerase; structural genomics, APC102156, PSI-biology, midwest center structural genomics, MCSG; 2.41A {Caenorhabditis elegans}
Probab=67.57 E-value=27 Score=25.98 Aligned_cols=26 Identities=8% Similarity=-0.126 Sum_probs=11.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
+...|.-+-+.|+|++|+..|..||+
T Consensus 66 ~~nla~~~~~~~~~~~A~~~~~~al~ 91 (162)
T 3rkv_A 66 YANMSQCYLNIGDLHEAEETSSEVLK 91 (162)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCcHHHHHHHHHHHHh
Confidence 33444444444444444444444443
No 46
>3rzi_A Probable 3-deoxy-D-arabino-heptulosonate 7-phosph synthase AROG; DAH7P synthase, shikimate pathway, aromatic biosynthesis; HET: PHE TRP; 1.95A {Mycobacterium tuberculosis} SCOP: c.1.10.8 PDB: 3kgf_A* 2b7o_A* 3nud_A* 3nue_A* 3nv8_A* 3pfp_A* 2w19_A 2w1a_A*
Probab=66.73 E-value=19 Score=34.64 Aligned_cols=69 Identities=12% Similarity=0.142 Sum_probs=57.7
Q ss_pred HhhHHHHHHHHHhcCCCcc-eEEEeecCCCCCCCccccchHHHHHHHHHHHHHHhccCcEEEEEecCCccceEEEecCCe
Q psy1410 124 CYNFLQFCELAIKNCKNVK-RINLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITLNINYSNTLHDREIVLSNDW 202 (246)
Q Consensus 124 ~~N~~~f~E~~v~~~~~~~-~i~L~T~~d~~~~~~~~~~~~~q~~~l~~i~~sl~~~gi~l~~~~~~tiHDR~I~~dnGw 202 (246)
-.-++++|+.| ++.+.. ++.|||..-..+ -.+.|-.|-+.....|-...|..|+ +|---|.+++|.
T Consensus 313 p~elv~L~~~L--nP~~epGRlTLI~RmGa~k----------v~~~LP~li~aV~~~G~~VvW~cDP-MHGNT~~~~~G~ 379 (462)
T 3rzi_A 313 PELAVEYVERL--DPHNKPGRLTLVSRMGNHK----------VRDLLPPIVEKVQATGHQVIWQCDP-MHGNTHESSTGF 379 (462)
T ss_dssp HHHHHHHHHHH--CTTCCTTSEEEEECCCTTT----------HHHHHHHHHHHHHHTSCCCEEEECC-STTSEEECTTSC
T ss_pred HHHHHHHHHHh--CCCCCCCeEEEEEccCCch----------hhhhHHHHHHHHHHCCCCeEEEeCC-CCCCceeCCCCC
Confidence 44588888888 455554 999999987655 4678999999999999999999997 999999999998
Q ss_pred EEE
Q psy1410 203 VIK 205 (246)
Q Consensus 203 ~Ik 205 (246)
+.+
T Consensus 380 KTR 382 (462)
T 3rzi_A 380 KTR 382 (462)
T ss_dssp EEE
T ss_pred ccC
Confidence 875
No 47
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=66.07 E-value=12 Score=27.22 Aligned_cols=34 Identities=15% Similarity=0.286 Sum_probs=29.8
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
..+.+..+...|..+-..|+|++|+.+|.++++.
T Consensus 9 ~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~al~~ 42 (166)
T 1a17_A 9 ALKRAEELKTQANDYFKAKDYENAIKFYSQAIEL 42 (166)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHccCHHHHHHHHHHHHHh
Confidence 4567888889999999999999999999999873
No 48
>3sz7_A HSC70 cochaperone (SGT); TPR domain, GET4, GET5, GET3, MDY2, SSA1, SSE1, chaperone regulator; 1.72A {Aspergillus fumigatus}
Probab=65.55 E-value=9.1 Score=28.72 Aligned_cols=16 Identities=13% Similarity=0.378 Sum_probs=7.6
Q ss_pred cCCHHHHHHHHHHHHH
Q psy1410 21 RGRWTESLTFYQDGVT 36 (246)
Q Consensus 21 ~g~y~EAl~lY~eaIe 36 (246)
.|+|++|+.+|.++++
T Consensus 92 ~g~~~~A~~~~~~al~ 107 (164)
T 3sz7_A 92 MADYKGAKEAYEKGIE 107 (164)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHH
Confidence 3444555544444443
No 49
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=64.20 E-value=7.3 Score=28.18 Aligned_cols=51 Identities=22% Similarity=0.313 Sum_probs=29.9
Q ss_pred HHHHHHHHHHHHHHh---------------cCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDE---------------RGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEV 67 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~---------------~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~ 67 (246)
+.|..++++|+++|. .|+|++|+..| -.++...|+...+..+... +.+|+.
T Consensus 26 ~~A~~~l~~AL~~dp~~~rA~~~lg~~~~~~g~y~~Ai~~w-------~~~l~~~p~~~~~~~i~~~----I~~A~~ 91 (93)
T 3bee_A 26 DEVSLLLEQALQLEPYNEAALSLIANDHFISFRFQEAIDTW-------VLLLDSNDPNLDRVTIIES----INKAKK 91 (93)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHH-------HHHHTCCCTTCCHHHHHHH----HHHHHH
T ss_pred HHHHHHHHHHHHHCcCCHHHHHHHHHHHHHcCCHHHHHHHH-------HHHHhhCCCCccHHHHHHH----HHHHHh
Confidence 578888888888886 45555555544 4455555443344444444 455543
No 50
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=63.84 E-value=14 Score=23.97 Aligned_cols=31 Identities=16% Similarity=0.276 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.+..+...|..+-..|+|++|+.+|.++++.
T Consensus 8 ~~~~~~~la~~~~~~~~~~~A~~~~~~a~~~ 38 (91)
T 1na3_A 8 SAEAWYNLGNAYYKQGDYDEAIEYYQKALEL 38 (91)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHccCHHHHHHHHHHHHhc
Confidence 3455667788888999999999999999863
No 51
>2rkk_A Vacuolar protein sorting-associated protein VTA1; MIT motif, cytoplasm, endosome, lipid transport, membrane, protein transport; 2.90A {Saccharomyces cerevisiae}
Probab=63.53 E-value=24 Score=29.47 Aligned_cols=118 Identities=13% Similarity=0.037 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhh-----ccCc
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKK-----MGNY 81 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~-----~g~~ 81 (246)
....++++|.++++.|+--=|+-|-.-|++..|.. ..+++..+ .-...-|+..|+.|..+..... .|..
T Consensus 5 ~i~p~l~rA~Ele~~~~PvVaYyCrlYave~iL~~--~~~s~e~~----~~l~~LlD~LE~~K~~~~~~e~~~~~~~~~~ 78 (168)
T 2rkk_A 5 NAARVVATAKDFDKVGLGIIGYYLQLYAVELILSE--EDRSQEMT----ALATELLDTIEAFKKEIGGESEAEDSDKSLH 78 (168)
T ss_dssp HHHHHHHHHHHHHHTTBHHHHHHHHHHHHHHHTTC--TTCCHHHH----HHHHHHHHHHHHHHHTTC-----------CT
T ss_pred hHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHhc--CCCChHHH----HHHHHHHHHHHHHHHhccccccccccccchh
Confidence 45689999999999999988888888888876654 34566554 4455669999999988754322 1222
Q ss_pred chhhhhcCCCCccch-----HHhHHHhhcccccEEEeeCCcccchhH-HhhHHHHH
Q psy1410 82 HEQIEIANNEKGVTY-----EKLFGRFLDENVEQIDVTDPYIHNKHQ-CYNFLQFC 131 (246)
Q Consensus 82 ~~~~~i~en~~G~sY-----e~lFg~yl~~~~~~I~ieDPYIr~~hQ-~~N~~~f~ 131 (246)
+-+.-|.+...|..| -+||...+.. .+.=..+..-+|.+|= ...|..+|
T Consensus 79 ~~~~~i~d~~~a~a~ve~FAlklF~~Ad~~-drag~~~k~~~k~fy~ta~~F~avl 133 (168)
T 2rkk_A 79 VMNTLIHDQEKAKIYMLNFTMSLYNEKLKQ-LKDGPWDVMLKRSLWCCIDLFSCIL 133 (168)
T ss_dssp TTTHHHHCHHHHHHHHHHHHHHHHHHHHHH-HHTSCCSHHHHHHHHHHHHHHHHHH
T ss_pred hhhhhcccHHHHHHHHHHHHHHHHHHHHHH-HhcCCcchhHHHHHHHHHHHHHHHH
Confidence 334456666666666 3788888764 2322333333455552 33354533
No 52
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=62.90 E-value=12 Score=29.00 Aligned_cols=33 Identities=12% Similarity=0.141 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
...+..+...|..+-..|+|++|+.+|.+|+++
T Consensus 35 ~~~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 67 (198)
T 2fbn_A 35 VQSAFDIKEEGNEFFKKNEINEAIVKYKEALDF 67 (198)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 456778889999999999999999999999874
No 53
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=62.25 E-value=11 Score=30.21 Aligned_cols=33 Identities=15% Similarity=0.116 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHHH---------------hcCCHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELD---------------ERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D---------------~~g~y~EAl~lY~eaIe~ 37 (246)
.+.|++...+|++.+ ..|++++|+.+|++|++.
T Consensus 100 ~~~A~~~~~~al~~~P~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~~ 147 (217)
T 2pl2_A 100 LEQALSVLKDAERVNPRYAPLHLQRGLVYALLGERDKAEASLKQALAL 147 (217)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccHHHHHHHHHHHHHcCChHHHHHHHHHHHhc
Confidence 456777777777765 468888888888888864
No 54
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=61.77 E-value=8.9 Score=25.96 Aligned_cols=25 Identities=20% Similarity=0.195 Sum_probs=20.5
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 12 LIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 12 l~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
+.+|..+-..|+|++|+.+|+++++
T Consensus 4 ~~~a~~~~~~~~~~~A~~~~~~al~ 28 (99)
T 2kc7_A 4 LKTIKELINQGDIENALQALEEFLQ 28 (99)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567777788999999999998876
No 55
>3qww_A SET and MYND domain-containing protein 2; methyltransferase, HSP90, transferase-transferase inhibitor; HET: SFG; 1.80A {Mus musculus} PDB: 3qwv_A* 3s7d_A* 3s7b_A* 3s7f_A* 3s7j_A* 3tg4_A* 3tg5_A* 3rib_A*
Probab=60.89 E-value=20 Score=33.28 Aligned_cols=55 Identities=9% Similarity=-0.054 Sum_probs=37.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYI 62 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm 62 (246)
.|...+...-...+.|+|+||+.+|+++++....++ +..+|..-..+..-..-|.
T Consensus 297 ~~~~~le~~~~~~~~g~~~eA~~~~~~~L~i~~~~l-g~~Hp~~a~~~~nLa~~y~ 351 (433)
T 3qww_A 297 YARNVIEEFRRAKHYKSPSELLEICELSQEKMSSVF-EDSNVYMLHMMYQAMGVCL 351 (433)
T ss_dssp HHHHHHHHHHHHTTTSCHHHHHHHHHHHHHHHTTTB-CTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhccCHHHHHHHHHHHHHHhhCcc-ChhchHHHHHHHHHHHHHH
Confidence 344455555555678999999999999999777666 5566766666555544444
No 56
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=59.98 E-value=38 Score=30.79 Aligned_cols=32 Identities=16% Similarity=0.185 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHHHHHh------------------cCCHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDE------------------RGRWTESLTFYQDGVT 36 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~------------------~g~y~EAl~lY~eaIe 36 (246)
.+.|++...+|++.+. .|+|++|+.+|.+|++
T Consensus 237 ~~~A~~~~~~al~~~p~~~~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 286 (474)
T 4abn_A 237 SQQALSAYAQAEKVDRKASSNPDLHLNRATLHKYEESYGEALEGFSQAAA 286 (474)
T ss_dssp HHHHHHHHHHHHHHCGGGGGCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 5678888888888776 5888888888888776
No 57
>1zb1_A BRO1 protein; AIP1, BRO1 domain, SNF7, trafficking, protein transport; 1.95A {Saccharomyces cerevisiae}
Probab=59.29 E-value=27 Score=31.91 Aligned_cols=67 Identities=12% Similarity=0.081 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcC---CChhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGL---SNKGDQQKIRDKIETYINRAEVLKGKLD 73 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e---~d~~kK~~lr~Ki~eYm~RAE~LK~~l~ 73 (246)
+|+..-..|..++++++|.||+.+++.|.+.+-.+.+.- ++...-..+..+|..-+++||+-=+.+-
T Consensus 256 ~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~~~~~~~~d~~~l~~~i~~~l~~a~kdNd~IY 325 (392)
T 1zb1_A 256 KSLSAYYHGLHLEEENRVGEAIAFLDFSMQQLISSLPFKTWLVEFIDFDGFKETLEKKQKELIKDNDFIY 325 (392)
T ss_dssp HHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHGGGCTTTTTTSCHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHccchHHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHHHHHHHhCccC
Confidence 566677789999999999999999999999988887552 1111123678888888888888877774
No 58
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=59.27 E-value=18 Score=24.69 Aligned_cols=31 Identities=10% Similarity=-0.005 Sum_probs=25.2
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.|-.+...|..+-..|+|++|+.+|.++++.
T Consensus 3 ~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~~ 33 (131)
T 1elr_A 3 QALKEKELGNDAYKKKDFDTALKHYDKAKEL 33 (131)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 4555677788888899999999999998874
No 59
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=58.52 E-value=22 Score=29.50 Aligned_cols=30 Identities=20% Similarity=0.104 Sum_probs=25.5
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q psy1410 9 QFLLIRAVELDERGRWTESLTFYQDGVTEL 38 (246)
Q Consensus 9 i~ll~rAVe~D~~g~y~EAl~lY~eaIe~L 38 (246)
..+...|.-+-+.|+|++|+.+|++|++..
T Consensus 197 ~~~~nlg~~y~~~~~y~~Al~~~~kal~~~ 226 (293)
T 2qfc_A 197 KVRYNHAKALYLDSRYEESLYQVNKAIEIS 226 (293)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHhHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 345567888899999999999999999865
No 60
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=57.11 E-value=50 Score=25.90 Aligned_cols=23 Identities=13% Similarity=0.361 Sum_probs=16.1
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 14 RAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 14 rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.|.-+-+.|+|++|+.+|.++++
T Consensus 60 lg~~~~~~g~~~~A~~~~~~al~ 82 (208)
T 3urz_A 60 LALAYKKNRNYDKAYLFYKELLQ 82 (208)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHCCCHHHHHHHHHHHHH
Confidence 56666677777777777777665
No 61
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=56.96 E-value=17 Score=25.68 Aligned_cols=31 Identities=23% Similarity=0.188 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.+..+...|..+-..|+|++|+.+|.+++..
T Consensus 8 ~~~~~~~~g~~~~~~~~~~~A~~~~~~al~~ 38 (137)
T 3q49_B 8 SAQELKEQGNRLFVGRKYPEAAACYGRAITR 38 (137)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCcHHHHHHHHHHHHhh
Confidence 3556778888888999999999999998874
No 62
>3upv_A Heat shock protein STI1; TPR-fold, adaptor protein for HSP70 and HSP90, C-terminal PA HSP70, peptide binding protein; 1.60A {Saccharomyces cerevisiae}
Probab=56.89 E-value=39 Score=23.66 Aligned_cols=25 Identities=16% Similarity=0.173 Sum_probs=12.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 12 LIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 12 l~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
...|.-+-..|+|++|+..|.++++
T Consensus 42 ~~~a~~~~~~~~~~~A~~~~~~al~ 66 (126)
T 3upv_A 42 SNRAAALAKLMSFPEAIADCNKAIE 66 (126)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3444444444555555555555443
No 63
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=56.67 E-value=24 Score=24.71 Aligned_cols=37 Identities=3% Similarity=-0.120 Sum_probs=28.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHH
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLK 40 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~ 40 (246)
....|..+...|.-+-..|++++|+.+|.+|++..-.
T Consensus 5 ~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~al~~~~~ 41 (164)
T 3ro3_A 5 RAAQGRAFGNLGNTHYLLGNFRDAVIAHEQRLLIAKE 41 (164)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHH
Confidence 3445666777788888888999999999888876543
No 64
>3r9m_A BRO1 domain-containing protein BROX; protein binding; 1.95A {Homo sapiens} PDB: 3um3_A 3zxp_A 3um2_A 3um1_A 3uly_A 3um0_A
Probab=56.49 E-value=52 Score=29.98 Aligned_cols=67 Identities=10% Similarity=0.023 Sum_probs=50.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCC------------Chh---HHHHHHHHHHHHHHHHHHHHHh
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLS------------NKG---DQQKIRDKIETYINRAEVLKGK 71 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~------------d~~---kK~~lr~Ki~eYm~RAE~LK~~ 71 (246)
.|+..-..|+.++++++|.||+.+++.|.+.+-.+.+.-+ .+. .-..+...|++-+++||+-=+.
T Consensus 252 ~A~A~y~~a~~~~~~~k~GeaIa~L~~A~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~l~~a~kdNd~ 331 (376)
T 3r9m_A 252 TAYAYCYHGETLLASDKCGEAIRSLQEAEKLYAKAEALCKEYGETKGPGPTVKPSGHLFFRKLGNLVKNTLEKCQRENGF 331 (376)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCSSCCCCGGGSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHHhccccCCccccccchhhHHHHHHHHHHHHHHHHHhhccc
Confidence 4777778899999999999999999999998887765310 111 2345677788888888877777
Q ss_pred hh
Q psy1410 72 LD 73 (246)
Q Consensus 72 l~ 73 (246)
|-
T Consensus 332 IY 333 (376)
T 3r9m_A 332 IY 333 (376)
T ss_dssp TT
T ss_pred ee
Confidence 63
No 65
>1o3u_A Conserved hypothetical protein TM0613; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.75A {Thermotoga maritima} SCOP: a.24.16.3
Probab=56.41 E-value=26 Score=27.17 Aligned_cols=39 Identities=21% Similarity=0.058 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHV 42 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~l 42 (246)
.+++|...+..|-.+=+.|.|..|...-++|+++.++++
T Consensus 12 ~~~~A~~dL~~A~~~l~~g~y~~a~F~aqQA~EkalKAl 50 (135)
T 1o3u_A 12 HMDAAKDDLEHAKHDLEHGFYNWACFSSQQAAEKAVKAV 50 (135)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHH
Confidence 367899999999888899999999999999999998886
No 66
>2xs1_A Programmed cell death 6-interacting protein; protein transport-viral protein complex, cell cycle; 2.30A {Homo sapiens} PDB: 2xs8_A 2oev_A 2r05_A 2r02_A 2r03_A 2oex_A 2ojq_A
Probab=55.85 E-value=28 Score=34.56 Aligned_cols=67 Identities=10% Similarity=0.033 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhh
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLD 73 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~ 73 (246)
.|+..-..|..++.+++|.||+.+++.|.+.+-.+.+.......-..+..+|..-+++||.-=+.+-
T Consensus 259 ~A~A~y~~a~~~~e~~k~GeaIa~L~~A~~~l~~a~~~~~~~~~~~~l~~~i~~~l~~~~kdNd~IY 325 (704)
T 2xs1_A 259 QANAEYHQSILAKQQYYFGEEIARLQHAAELIKTVASRYDEYVNVKDFSDKINRALAAAKKDNDFIY 325 (704)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSTTTCCCHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHhcchHhHHHHHHHHHHHHHHHHHhhCeee
Confidence 5666677899999999999999999999998887775433222234578888888888888877764
No 67
>3ma5_A Tetratricopeptide repeat domain protein; NESG, structural genomics, PSI-2, protein structure initiative; 2.80A {Salinibacter ruber} PDB: 2kcl_A 2kcv_A
Probab=55.51 E-value=19 Score=25.04 Aligned_cols=33 Identities=24% Similarity=0.292 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHH---------------hcCCHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELD---------------ERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D---------------~~g~y~EAl~lY~eaIe~ 37 (246)
.+.|+....+|++.| ..|++++|+..|++|+++
T Consensus 23 ~~~A~~~~~~al~~~p~~~~a~~~lg~~~~~~g~~~~A~~~~~~al~l 70 (100)
T 3ma5_A 23 ASRALALFEELVETDPDYVGTYYHLGKLYERLDRTDDAIDTYAQGIEV 70 (100)
T ss_dssp HHHHHHHHHHHHHHSTTCTHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHhh
Confidence 456777777777766 578899999999998874
No 68
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=55.17 E-value=11 Score=27.79 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=11.2
Q ss_pred HHhcCCHHHHHHHHHHHHH
Q psy1410 18 LDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 18 ~D~~g~y~EAl~lY~eaIe 36 (246)
+-..|+|++|+.+|..|++
T Consensus 62 ~~~~g~~~~A~~~~~~al~ 80 (142)
T 2xcb_A 62 RQSLGLYEQALQSYSYGAL 80 (142)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhhHHHHHHHHHHHHh
Confidence 3356666666666666554
No 69
>2xcb_A PCRH, regulatory protein PCRH; protein transport, bacterial toxin, type III secretion, protein binding; 1.85A {Pseudomonas aeruginosa} PDB: 2xcc_A
Probab=55.08 E-value=21 Score=26.21 Aligned_cols=30 Identities=13% Similarity=0.281 Sum_probs=25.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.+-.+...|..+-..|+|++|+.+|..++.
T Consensus 17 ~~~~~~~~a~~~~~~g~~~~A~~~~~~al~ 46 (142)
T 2xcb_A 17 TLEQLYALGFNQYQAGKWDDAQKIFQALCM 46 (142)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 345567789999999999999999998885
No 70
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=54.95 E-value=21 Score=29.83 Aligned_cols=29 Identities=3% Similarity=0.041 Sum_probs=21.8
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVTELL 39 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll 39 (246)
+...|.-+...|+|++|+.+|.+|+++.-
T Consensus 80 ~~~lg~~~~~~g~~~~A~~~~~~Al~l~~ 108 (292)
T 1qqe_A 80 YVEAYKCFKSGGNSVNAVDSLENAIQIFT 108 (292)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Confidence 33444555577999999999999998653
No 71
>3gyz_A Chaperone protein IPGC; asymmetric homodimer, tetratricopeptide repeat, TPR, chapero virulence; 2.15A {Shigella flexneri} PDB: 3gz1_A 3gz2_A 3ks2_A
Probab=54.88 E-value=19 Score=27.90 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.+-.+...|..+-+.|+|++|+.+|..+++
T Consensus 35 ~~~~~~~lg~~~~~~g~~~eA~~~~~~al~ 64 (151)
T 3gyz_A 35 MMDDIYSYAYDFYNKGRIEEAEVFFRFLCI 64 (151)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344567888999999999999999999886
No 72
>1vp7_A Exodeoxyribonuclease VII small subunit; NP_881400.1, joint center for structural genomics, PSI, protein structure initiative; 2.40A {Bordetella pertussis tohama I} SCOP: a.7.13.1
Probab=54.74 E-value=42 Score=25.69 Aligned_cols=34 Identities=32% Similarity=0.294 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHHHhcCC--HHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDERGR--WTESLTFYQDGVTEL 38 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~g~--y~EAl~lY~eaIe~L 38 (246)
.+.|+.-+..-|+.=..|. .++|+.+|++|+.++
T Consensus 32 FEeal~eLEeIV~~LE~gel~LEesl~lyeeG~~L~ 67 (100)
T 1vp7_A 32 FETALAELESLVSAMENGTLPLEQSLSAYRRGVELA 67 (100)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHH
Confidence 4567777777777766664 599999999999743
No 73
>1qqe_A Vesicular transport protein SEC17; helix-turn-helix TPR-like repeat, protein transport; 2.90A {Saccharomyces cerevisiae} SCOP: a.118.8.1
Probab=54.65 E-value=21 Score=29.78 Aligned_cols=23 Identities=9% Similarity=0.133 Sum_probs=18.0
Q ss_pred HHHhc-CCHHHHHHHHHHHHHHHH
Q psy1410 17 ELDER-GRWTESLTFYQDGVTELL 39 (246)
Q Consensus 17 e~D~~-g~y~EAl~lY~eaIe~Ll 39 (246)
-+... |++++|+.+|++|+++.-
T Consensus 126 ~~~~~lg~~~~A~~~~~~Al~~~~ 149 (292)
T 1qqe_A 126 ILENDLHDYAKAIDCYELAGEWYA 149 (292)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHhhcCHHHHHHHHHHHHHHHH
Confidence 33444 999999999999998654
No 74
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=54.45 E-value=40 Score=30.60 Aligned_cols=33 Identities=18% Similarity=0.212 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTEL 38 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~L 38 (246)
+.|..+..+|..+-+.|+|++|+.+|.+||++.
T Consensus 266 ~~a~~~~~~G~~~~~~g~~~~A~~~y~~Al~~~ 298 (457)
T 1kt0_A 266 EQAAIVKEKGTVYFKGGKYMQAVIQYGKIVSWL 298 (457)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHh
Confidence 456677889999999999999999999999853
No 75
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=53.86 E-value=21 Score=26.87 Aligned_cols=30 Identities=13% Similarity=0.101 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.+..+...|..+-..|+|++|+.+|..++.
T Consensus 20 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~ 49 (148)
T 2vgx_A 20 TLEQLYSLAFNQYQSGXYEDAHXVFQALCV 49 (148)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHcCChHHHHHHHHHHHH
Confidence 344566788888899999999999988875
No 76
>3urz_A Uncharacterized protein; tetratricopeptide repeats (TPR) containing protein, structur genomics, joint center for structural genomics, JCSG; HET: PG4; 2.19A {Bacteroides ovatus}
Probab=53.81 E-value=14 Score=29.30 Aligned_cols=31 Identities=10% Similarity=0.234 Sum_probs=26.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.+-.++.+|+.+=+.|+|++|+.+|.++++.
T Consensus 3 ~~~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 33 (208)
T 3urz_A 3 SVDEMLQKVSAAIEAGQNGQAVSYFRQTIAL 33 (208)
T ss_dssp CHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCHHHHHHHHHHHHHh
Confidence 3456788999999999999999999999873
No 77
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=53.47 E-value=15 Score=25.92 Aligned_cols=30 Identities=20% Similarity=0.217 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.+..+...|..+-..|+|++|+.+|.++++
T Consensus 27 ~~~~~~~~a~~~~~~~~~~~A~~~~~~a~~ 56 (148)
T 2dba_A 27 SVEQLRKEGNELFKCGDYGGALAAYTQALG 56 (148)
T ss_dssp CHHHHHHHHHHHHTTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 456678889999999999999999999875
No 78
>2pl2_A Hypothetical conserved protein TTC0263; TPR, protein binding; 2.50A {Thermus thermophilus}
Probab=53.38 E-value=11 Score=30.10 Aligned_cols=17 Identities=18% Similarity=-0.132 Sum_probs=12.6
Q ss_pred HHHHHHHHHHHHHHHhc
Q psy1410 5 IELAQFLLIRAVELDER 21 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~ 21 (246)
.+.|+....+|++++..
T Consensus 55 ~~~A~~~~~~al~~~P~ 71 (217)
T 2pl2_A 55 VNPALENGKTLVARTPR 71 (217)
T ss_dssp HHHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHHhCCC
Confidence 45788888888887653
No 79
>2kc7_A BFR218_protein; tetratricopeptide repeat, all-alpha, GFT-structural genomics, PSI-2, protein structure initiative; NMR {Bacteroides fragilis}
Probab=53.16 E-value=16 Score=24.55 Aligned_cols=19 Identities=26% Similarity=0.657 Sum_probs=10.8
Q ss_pred HHhcCCHHHHHHHHHHHHH
Q psy1410 18 LDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 18 ~D~~g~y~EAl~lY~eaIe 36 (246)
+-..|++++|+.+|+++++
T Consensus 45 ~~~~~~~~~A~~~~~~al~ 63 (99)
T 2kc7_A 45 YRKLGDWQKALNNYQSAIE 63 (99)
T ss_dssp HHHHTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHh
Confidence 3345566666666666554
No 80
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=53.10 E-value=26 Score=23.70 Aligned_cols=32 Identities=16% Similarity=0.178 Sum_probs=26.8
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
..+..+...|..+-..|++++|+.+|.+++..
T Consensus 10 ~~~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 41 (131)
T 2vyi_A 10 AEAERLKTEGNEQMKVENFEAAVHFYGKAIEL 41 (131)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHHHHHHHccCHHHHHHHHHHHHHc
Confidence 45667778888899999999999999998863
No 81
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=51.83 E-value=26 Score=24.64 Aligned_cols=26 Identities=15% Similarity=0.271 Sum_probs=18.9
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 12 LIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 12 l~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
...|.-+-..|+|++|+.+|+++++.
T Consensus 31 ~~lg~~~~~~~~~~~A~~~~~~al~~ 56 (117)
T 3k9i_A 31 LGLGSTFRTLGEYRKAEAVLANGVKQ 56 (117)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34444555688999999988888864
No 82
>3qwp_A SET and MYND domain-containing protein 3; SMYD3,SET and MYND domain, zinc finger MYND domain-containin 1, structural genomics; HET: SAM; 1.53A {Homo sapiens} PDB: 3mek_A* 3oxg_A* 3oxf_A* 3pdn_A* 3oxl_A* 3ru0_A*
Probab=51.73 E-value=50 Score=30.36 Aligned_cols=48 Identities=10% Similarity=-0.073 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRD 56 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~ 56 (246)
|..+-.-|..+...|+|++|+.+|+++++....++ ++..|..-..+..
T Consensus 329 ~~~~~~L~~~y~~~g~~~eA~~~~~~~L~i~~~~l-g~~Hp~~a~~l~n 376 (429)
T 3qwp_A 329 LKVLDCAMDACINLGLLEEALFYGTRTMEPYRIFF-PGSHPVRGVQVMK 376 (429)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHS-CSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhccHHHHHHHHHHHHHhHHHHc-CCCChHHHHHHHH
Confidence 34444556667789999999999999999887776 5556665444443
No 83
>1wol_A ST0689, 122AA long conserved hypothetical protein; alpha helix, loop, unknown function; 1.62A {Sulfolobus tokodaii}
Probab=51.36 E-value=37 Score=25.53 Aligned_cols=39 Identities=18% Similarity=0.050 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHV 42 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~l 42 (246)
.+++|.+.+..|-.+=+.|.|..|...-++|+++.++++
T Consensus 7 wl~~A~~dL~~A~~~~~~g~y~~a~f~aqQa~Ek~lKal 45 (122)
T 1wol_A 7 WIKQAERDLEEARYAKSGGYYELACFLSQQCAEKAVKGL 45 (122)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHH
Confidence 467899999999888899999999999999999998876
No 84
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=50.96 E-value=16 Score=36.27 Aligned_cols=18 Identities=11% Similarity=0.270 Sum_probs=9.0
Q ss_pred HHHHHHhccCcEEEEEec
Q psy1410 171 QLQESLRKMKITLNINYS 188 (246)
Q Consensus 171 ~i~~sl~~~gi~l~~~~~ 188 (246)
++.+-...-+|.+=|..+
T Consensus 305 ~~a~~i~~d~iDIlidl~ 322 (723)
T 4gyw_A 305 KAADRIHQDGIHILVNMN 322 (723)
T ss_dssp HHHHHHHHTTCSEEEESC
T ss_pred HHHHHHHhccceeEEecc
Confidence 344445555665554444
No 85
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=50.87 E-value=23 Score=29.76 Aligned_cols=26 Identities=8% Similarity=0.128 Sum_probs=18.2
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHH
Q psy1410 13 IRAVELDERGRWTESLTFYQDGVTELL 39 (246)
Q Consensus 13 ~rAVe~D~~g~y~EAl~lY~eaIe~Ll 39 (246)
.-|.-+.. |+|++|+.+|++|+++.-
T Consensus 121 ~lg~~~~~-g~~~~A~~~~~~Al~~~~ 146 (307)
T 2ifu_A 121 RAGKLMEP-LDLSKAVHLYQQAAAVFE 146 (307)
T ss_dssp HHHHHHTT-TCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHc-CCHHHHHHHHHHHHHHHH
Confidence 34444555 888888888888887554
No 86
>3ro2_A PINS homolog, G-protein-signaling modulator 2; TPR repeat, protein-protein interaction, protein-binding, PR binding; 2.30A {Mus musculus}
Probab=50.55 E-value=64 Score=25.52 Aligned_cols=31 Identities=16% Similarity=0.260 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.+..+...|..+-..|++++|+.+|.++++.
T Consensus 4 ~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 34 (338)
T 3ro2_A 4 SCLELALEGERLCKSGDCRAGVSFFEAAVQV 34 (338)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHhh
Confidence 4667888999999999999999999999974
No 87
>1na3_A Designed protein CTPR2; de novo protein; HET: IPT; 1.55A {Unidentified} SCOP: k.38.1.1 PDB: 2avp_A
Probab=50.35 E-value=29 Score=22.43 Aligned_cols=31 Identities=29% Similarity=0.566 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHH---------------hcCCHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELD---------------ERGRWTESLTFYQDGVT 36 (246)
Q Consensus 6 ~kAi~ll~rAVe~D---------------~~g~y~EAl~lY~eaIe 36 (246)
++|+....+|++.+ ..|++++|+.+|.++++
T Consensus 26 ~~A~~~~~~a~~~~~~~~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 71 (91)
T 1na3_A 26 DEAIEYYQKALELDPNNAEAWYNLGNAYYKQGDYDEAIEYYQKALE 71 (91)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 45666666666554 46777777777777765
No 88
>1nfv_A Bacterioferritin; 24 subunits in the active molecule, DIIRON HAEM Fe-coproporphyrin III cofactor, iron storage-electron complex; HET: FEC; 1.95A {Desulfovibrio desulfuricans} SCOP: a.25.1.1 PDB: 1nf6_A* 1nf4_A*
Probab=50.20 E-value=65 Score=25.38 Aligned_cols=72 Identities=8% Similarity=0.059 Sum_probs=47.3
Q ss_pred HHHHHHHHHHHHHHHHHHhh---cCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc--Ccchhh----hhcCCCCcc
Q psy1410 24 WTESLTFYQDGVTELLKHVR---GLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMG--NYHEQI----EIANNEKGV 94 (246)
Q Consensus 24 y~EAl~lY~eaIe~Ll~~lk---~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g--~~~~~~----~i~en~~G~ 94 (246)
++.|+.....+++.+..++. .+.|+..++.+..-+.+-...+..|+.++..-+..| .|..++ ....++.|+
T Consensus 92 l~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~l~~~g~~~y~~~~~~~~~~~~~~~~~ 171 (179)
T 1nfv_A 92 YESDADQEDATIEAYSQFLKVCKEQGDIVTARLFERIIEEEQAHLTYYENIGSHIKNLGDTYLAKIAGTPSSTGTASKGF 171 (179)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHBTCCCCCSSCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHhccccccCCCcccc
Confidence 34556666666665555554 458999999999999998888888888887655444 233333 233455665
Q ss_pred c
Q psy1410 95 T 95 (246)
Q Consensus 95 s 95 (246)
-
T Consensus 172 ~ 172 (179)
T 1nfv_A 172 V 172 (179)
T ss_dssp C
T ss_pred c
Confidence 3
No 89
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=49.53 E-value=16 Score=25.17 Aligned_cols=30 Identities=17% Similarity=0.408 Sum_probs=24.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.+..+...|..+-..|+|++|+.+|.++++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~A~~~~~~al~ 44 (133)
T 2lni_A 15 LALMVKNKGNECFQKGDYPQAMKHYTEAIK 44 (133)
T ss_dssp HHHHHHHHHHHHHHTTCSHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 455677788888899999999999998875
No 90
>1ufb_A TT1696 protein; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 1.90A {Thermus thermophilus} SCOP: a.24.16.3
Probab=48.67 E-value=38 Score=25.44 Aligned_cols=39 Identities=21% Similarity=0.050 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHV 42 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~l 42 (246)
.+++|...+..|-.+=+.|.|..|...-++|+++.++++
T Consensus 7 w~~~A~~~L~~A~~~~~~g~y~~a~f~a~qa~Ek~lKal 45 (127)
T 1ufb_A 7 WLEQARHNLRHAQGSLGLGDYAWACFAAQQAAEAALKGL 45 (127)
T ss_dssp HHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHH
Confidence 567899999999888889999999999999999998876
No 91
>3ro3_A PINS homolog, G-protein-signaling modulator 2; asymmetric cell division, protein binding; 1.10A {Mus musculus}
Probab=48.30 E-value=40 Score=23.50 Aligned_cols=30 Identities=7% Similarity=-0.037 Sum_probs=22.8
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q psy1410 10 FLLIRAVELDERGRWTESLTFYQDGVTELL 39 (246)
Q Consensus 10 ~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll 39 (246)
.+...|.-+-..|++++|+.+|.+|+++.-
T Consensus 51 ~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~ 80 (164)
T 3ro3_A 51 AYSNLGNAYIFLGEFETASEYYKKTLLLAR 80 (164)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 444556666778999999999999987654
No 92
>4a1s_A PINS, partner of inscuteable; cell cycle, LGN, mitotic spindle orientation, asymmetric CEL divisions; 2.10A {Drosophila melanogaster}
Probab=48.29 E-value=81 Score=26.58 Aligned_cols=33 Identities=15% Similarity=0.287 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
...+..+...|..+-..|+|++|+.+|+++++.
T Consensus 45 ~~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 77 (411)
T 4a1s_A 45 SSMCLELALEGERLCNAGDCRAGVAFFQAAIQA 77 (411)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHh
Confidence 356778889999999999999999999999984
No 93
>4abn_A Tetratricopeptide repeat protein 5; P53 cofactor, stress-response, DNA repair, gene regulation; 2.05A {Mus musculus}
Probab=48.16 E-value=13 Score=33.97 Aligned_cols=34 Identities=15% Similarity=0.018 Sum_probs=26.0
Q ss_pred HHHHHHHHHHHHHHHHhc-----------------------CCHHHHHHHHHHHHHH
Q psy1410 4 SIELAQFLLIRAVELDER-----------------------GRWTESLTFYQDGVTE 37 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~-----------------------g~y~EAl~lY~eaIe~ 37 (246)
-.+.|++...+|++++.. |+|++|+.+|++|+++
T Consensus 194 ~~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~~~~~~~~~g~~~~A~~~~~~al~~ 250 (474)
T 4abn_A 194 HVMDSVRQAKLAVQMDVLDGRSWYILGNAYLSLYFNTGQNPKISQQALSAYAQAEKV 250 (474)
T ss_dssp HHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHHHhhccccchHHHHHHHHHHHHHh
Confidence 356899999999998876 6677777777776653
No 94
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=48.05 E-value=56 Score=22.50 Aligned_cols=23 Identities=9% Similarity=0.029 Sum_probs=15.6
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 14 RAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 14 rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.|.-+-..|+|++|+.+|..+++
T Consensus 45 lg~~~~~~~~~~~A~~~~~~~~~ 67 (129)
T 2xev_A 45 LGESYYATRNFQLAEAQFRDLVS 67 (129)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHHH
Confidence 34444556788888888877765
No 95
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=47.41 E-value=29 Score=26.76 Aligned_cols=26 Identities=8% Similarity=0.118 Sum_probs=11.6
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy1410 10 FLLIRAVELDERGRWTESLTFYQDGV 35 (246)
Q Consensus 10 ~ll~rAVe~D~~g~y~EAl~lY~eaI 35 (246)
.+...|..+-..|+|++|+.+|.+++
T Consensus 7 ~~~~~g~~~~~~~~~~~A~~~~~~a~ 32 (258)
T 3uq3_A 7 KEKAEGNKFYKARQFDEAIEHYNKAW 32 (258)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHH
Confidence 33444444444444444444444444
No 96
>2gw1_A Mitochondrial precursor proteins import receptor; TPR, protein transport; 3.00A {Saccharomyces cerevisiae}
Probab=47.19 E-value=28 Score=30.24 Aligned_cols=33 Identities=9% Similarity=0.155 Sum_probs=27.4
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.+.|-.+..+|..+-+.|+|++|+.+|.++++.
T Consensus 3 ~~~a~~~~~~g~~~~~~g~~~~A~~~~~~al~~ 35 (514)
T 2gw1_A 3 DKYALALKDKGNQFFRNKKYDDAIKYYNWALEL 35 (514)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHhccHHHHHHHHHHHHhc
Confidence 457778888888888999999999999888863
No 97
>3vtx_A MAMA; tetratricopeptide repeats (TPR) containing protein, peptide protein, protein binding; 1.75A {Candidatus magnetobacterium bavaricum} PDB: 3vty_A
Probab=46.91 E-value=23 Score=26.59 Aligned_cols=24 Identities=13% Similarity=0.295 Sum_probs=17.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 14 RAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 14 rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.|.-+-+.|+|++|+.+|+++++.
T Consensus 113 lg~~~~~~g~~~~A~~~~~~~l~~ 136 (184)
T 3vtx_A 113 LGLVYDSMGEHDKAIEAYEKTISI 136 (184)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCchhHHHHHHHHHHh
Confidence 344455678999999999888863
No 98
>3k9i_A BH0479 protein; putative protein binding protein, structural genomics, joint for structural genomics, JCSG; 2.71A {Bacillus halodurans}
Probab=46.37 E-value=22 Score=25.07 Aligned_cols=17 Identities=12% Similarity=0.352 Sum_probs=9.6
Q ss_pred hcCCHHHHHHHHHHHHH
Q psy1410 20 ERGRWTESLTFYQDGVT 36 (246)
Q Consensus 20 ~~g~y~EAl~lY~eaIe 36 (246)
..|++++|+.+|.++++
T Consensus 73 ~~g~~~~A~~~~~~al~ 89 (117)
T 3k9i_A 73 NLGRYEQGVELLLKIIA 89 (117)
T ss_dssp HHTCHHHHHHHHHHHHH
T ss_pred HcCCHHHHHHHHHHHHH
Confidence 34566666665555554
No 99
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=46.10 E-value=28 Score=27.34 Aligned_cols=16 Identities=6% Similarity=0.283 Sum_probs=7.7
Q ss_pred cCCHHHHHHHHHHHHH
Q psy1410 21 RGRWTESLTFYQDGVT 36 (246)
Q Consensus 21 ~g~y~EAl~lY~eaIe 36 (246)
.|++++|+.+|.++++
T Consensus 90 ~~~~~~A~~~~~~al~ 105 (275)
T 1xnf_A 90 AGNFDAAYEAFDSVLE 105 (275)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHh
Confidence 3455555555544443
No 100
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=45.99 E-value=25 Score=29.46 Aligned_cols=28 Identities=21% Similarity=0.199 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 9 QFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 9 i~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
..+...|..+-..|+|++|+.+|.+|+.
T Consensus 5 ~~~~~~g~~~~~~g~~~~A~~~~~~al~ 32 (281)
T 2c2l_A 5 QELKEQGNRLFVGRKYPEAAACYGRAIT 32 (281)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 3455566666666677776666666665
No 101
>4a1g_A Mitotic checkpoint serine/threonine-protein kinas; cell cycle, transferase, spindle assembly checkpoint, mitosi repeat, KNL1, KMN network; 2.60A {Homo sapiens} PDB: 2lah_A
Probab=45.61 E-value=47 Score=27.02 Aligned_cols=49 Identities=12% Similarity=0.289 Sum_probs=37.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRA 65 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RA 65 (246)
|.-...-|.-++..|+|++|-..|+.||+- +++| .+.|.++..++..|.
T Consensus 101 AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~-----~A~P----~~rL~~~~~~F~~R~ 149 (152)
T 4a1g_A 101 SPLYIAWAGHLEAQGELQHASAVLQRGIQN-----QAEP----REFLQQQYRLFQTRL 149 (152)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-----TCBS----HHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCcc----HHHHHHHHHHHHHHh
Confidence 556677899999999999999999999972 3344 344666666776664
No 102
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=45.30 E-value=39 Score=22.56 Aligned_cols=30 Identities=17% Similarity=0.308 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
+..+...|..+-..|++++|+.+|.+++..
T Consensus 9 ~~~~~~~~~~~~~~~~~~~A~~~~~~~~~~ 38 (125)
T 1na0_A 9 AEAWYNLGNAYYKQGDYDEAIEYYQKALEL 38 (125)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHH
Confidence 455667788888899999999999998863
No 103
>2wvi_A Mitotic checkpoint serine/threonine-protein kinase BUB1 beta; tumor suppressor, TPR, apoptosis, cell division, cell cycle, kinetochore, transferase; 1.80A {Homo sapiens} PDB: 3si5_A
Probab=45.12 E-value=69 Score=26.29 Aligned_cols=51 Identities=18% Similarity=0.375 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEV 67 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~ 67 (246)
|.-...-|.-++..|+|.+|-..|+.||+ .+++|- +.|.++-.++..|...
T Consensus 96 AlfY~~wA~~lE~~~~~~~A~~Iy~~Gi~-----~~A~P~----~~L~~~~~~F~~R~~~ 146 (164)
T 2wvi_A 96 AQFYISWAEEYEARENFRKADAIFQEGIQ-----QKAEPL----ERLQSQHRQFQARVSR 146 (164)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH-----TTCBSH----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHH-----cCCCcH----HHHHHHHHHHHHHHHH
Confidence 56677889999999999999999999997 223443 3466666677777654
No 104
>1hxi_A PEX5, peroxisome targeting signal 1 receptor PEX5; alpha helical, transport protein; 1.60A {Trypanosoma brucei} SCOP: a.118.8.1
Probab=45.02 E-value=26 Score=25.33 Aligned_cols=26 Identities=4% Similarity=0.032 Sum_probs=20.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
....|..+-+.|++++|+.+|..+++
T Consensus 20 ~~~~g~~~~~~g~~~~A~~~~~~al~ 45 (121)
T 1hxi_A 20 PMEEGLSMLKLANLAEAALAFEAVCQ 45 (121)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 45567777788899999888888876
No 105
>2e2a_A Protein (enzyme IIA); helical bundles, PTS, transferase, phosphotransferase system; 2.10A {Lactococcus lactis} SCOP: a.7.2.1 PDB: 1e2a_A
Probab=44.94 E-value=45 Score=25.57 Aligned_cols=35 Identities=14% Similarity=0.193 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKH 41 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~ 41 (246)
.|.+.+-.|++.=++|+|++|-.+..+|=+.|..+
T Consensus 19 ~ArS~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~A 53 (105)
T 2e2a_A 19 DARSKLLEALKAAENGDFAKADSLVVEAGSCIAEA 53 (105)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999988877765
No 106
>1wcr_A PTS system, N, N'-diacetylchitobiose-specific IIA component; mutagenesis, transferase, sugar transport, phosphotransferase; NMR {Escherichia coli} PDB: 2wy2_A 2wwv_A
Probab=44.79 E-value=46 Score=25.44 Aligned_cols=35 Identities=14% Similarity=0.190 Sum_probs=31.3
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKH 41 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~ 41 (246)
.|.+.+-+|++.=++|+|++|-.+..+|=+.|..+
T Consensus 17 ~Ars~~~eAl~~Ak~g~fe~A~~~l~eA~~~l~~A 51 (103)
T 1wcr_A 17 QARSLAYAALKQAKQGDFAAAKAMMDQSRMALNEA 51 (103)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHH
Confidence 68899999999999999999999999988877765
No 107
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=44.73 E-value=18 Score=31.45 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDERGRWTESLTFYQDGVTEL 38 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~L 38 (246)
.+.|..+...|..+-+.|+|++|+.+|.+|+.+.
T Consensus 176 ~~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~~ 209 (338)
T 2if4_A 176 IGAADRRKMDGNSLFKEEKLEEAMQQYEMAIAYM 209 (338)
T ss_dssp HHHHHHHHHHHHHTCSSSCCHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHh
Confidence 4577788899999999999999999999999753
No 108
>2fbn_A 70 kDa peptidylprolyl isomerase, putative; sulfur SAD, PFL2275C, TPR-containing domain, structural genomics; 1.63A {Plasmodium falciparum} SCOP: a.118.8.1
Probab=44.47 E-value=77 Score=24.20 Aligned_cols=28 Identities=7% Similarity=0.043 Sum_probs=17.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 9 QFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 9 i~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.-+...|.-+-..|+|++|+.+|..+++
T Consensus 89 ~~~~~la~~~~~~~~~~~A~~~~~~al~ 116 (198)
T 2fbn_A 89 SCNLNLATCYNKNKDYPKAIDHASKVLK 116 (198)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3444556666666777777777766665
No 109
>3esl_A Checkpoint serine/threonine-protein kinase BUB1; mitotic spindle checkpoint, TPR motif, all-alpha domain, MAD3-like domain; HET: NHE; 1.74A {Saccharomyces cerevisiae}
Probab=44.46 E-value=67 Score=27.40 Aligned_cols=50 Identities=12% Similarity=0.153 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAE 66 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE 66 (246)
|.-...-|.-++..|+|++|-..|+.||+- +++| .+.|.++..++..|..
T Consensus 115 AlfYe~wA~~lE~~g~~~~A~~Vy~~GI~~-----~A~P----~~rL~~~~~~F~~R~~ 164 (202)
T 3esl_A 115 SLFYEEFSKLLENAQFFLEAKVLLELGAEN-----NCRP----YNRLLRSLSNYEDRLR 164 (202)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHT-----TCBS----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCcc----HHHHHHHHHHHHHHHH
Confidence 556677899999999999999999999971 2233 3447777777777743
No 110
>2l6j_A TPR repeat-containing protein associated with HSP; tetratricopeptide repeat (TPR), HSP90 CO-factor, protein BIN; NMR {Saccharomyces cerevisiae}
Probab=44.39 E-value=28 Score=23.35 Aligned_cols=32 Identities=16% Similarity=0.260 Sum_probs=20.1
Q ss_pred HHHHHHHHHHHHHHHh---------------cCCHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDE---------------RGRWTESLTFYQDGVT 36 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~---------------~g~y~EAl~lY~eaIe 36 (246)
.+.|++...+|++.+. .|+|++|+.+|.++++
T Consensus 20 ~~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 66 (111)
T 2l6j_A 20 YREAVHCYDQLITAQPQNPVGYSNKAMALIKLGEYTQAIQMCQQGLR 66 (111)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 3567777777776654 5666666666666553
No 111
>2ifu_A Gamma-SNAP; membrane fusion, snare complex disassembly, protein structure initiative, PSI, center for eukaryotic structural genomics, CESG; HET: MSE; 2.60A {Danio rerio}
Probab=44.29 E-value=40 Score=28.28 Aligned_cols=32 Identities=13% Similarity=0.079 Sum_probs=17.2
Q ss_pred HHHHHHHHH-HHHHhcCCHHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRA-VELDERGRWTESLTFYQDGVTEL 38 (246)
Q Consensus 7 kAi~ll~rA-Ve~D~~g~y~EAl~lY~eaIe~L 38 (246)
.|+++..+| .-+-..|+|++|+.+|.+|+++.
T Consensus 34 ~A~~~~~~a~~~~~~~g~~~~A~~~~~~al~~~ 66 (307)
T 2ifu_A 34 SAASEYAKAAVAFKNAKQLEQAKDAYLQEAEAH 66 (307)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Confidence 344444443 22445566666666666666543
No 112
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=44.25 E-value=36 Score=23.58 Aligned_cols=25 Identities=8% Similarity=0.198 Sum_probs=17.9
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 12 LIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 12 l~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
...|.-+-..|+|++|+.+|.++++
T Consensus 23 ~~lg~~~~~~g~~~~A~~~~~~al~ 47 (115)
T 2kat_A 23 FTLGKTYAEHEQFDAALPHLRAALD 47 (115)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHccCHHHHHHHHHHHHH
Confidence 3445556677888888888888775
No 113
>2vgx_A Chaperone SYCD; alternative dimer assembly, tetratricopeptide repeat, type III secretion; HET: MLY; 1.95A {Yersinia enterocolitica} SCOP: k.38.1.1 PDB: 2vgx_B* 2vgy_A*
Probab=44.17 E-value=32 Score=25.80 Aligned_cols=31 Identities=23% Similarity=0.333 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHH---------------hcCCHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELD---------------ERGRWTESLTFYQDGVT 36 (246)
Q Consensus 6 ~kAi~ll~rAVe~D---------------~~g~y~EAl~lY~eaIe 36 (246)
+.|+....+|++.+ ..|+|++|+.+|.+|+.
T Consensus 38 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 83 (148)
T 2vgx_A 38 EDAHXVFQALCVLDHYDSRFFLGLGACRQAMGQYDLAIHSYSYGAV 83 (148)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 45555555555544 56888888888888775
No 114
>3l8r_A PTCA, putative PTS system, cellobiose-specific IIA component; helix; 2.50A {Streptococcus mutans} SCOP: a.7.2.0
Probab=44.05 E-value=45 Score=26.28 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKH 41 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~ 41 (246)
.|.+.+-+|++.=++|+|++|-.+..+|=+.|..+
T Consensus 36 ~ARS~~~eAl~~Ak~gdfe~A~~~l~eA~e~l~~A 70 (120)
T 3l8r_A 36 NARSIVHEAFDAMREKNYILAEQKLQEANDELLKA 70 (120)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 68888999999999999999999999988777765
No 115
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=44.00 E-value=53 Score=27.08 Aligned_cols=27 Identities=22% Similarity=0.105 Sum_probs=21.0
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHH
Q psy1410 13 IRAVELDERGRWTESLTFYQDGVTELL 39 (246)
Q Consensus 13 ~rAVe~D~~g~y~EAl~lY~eaIe~Ll 39 (246)
.-|.-+-+.|+|++|+.+|.+|+++.-
T Consensus 201 nlg~~y~~~~~y~~A~~~~~~al~~~~ 227 (293)
T 3u3w_A 201 NHAKALYLDSRYEESLYQVNKAIEISC 227 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHHHHHHHHHHH
Confidence 344445678999999999999998653
No 116
>2xev_A YBGF; tetratricopeptide, alpha-helical, metal binding; 1.57A {Xanthomonas campestris}
Probab=43.90 E-value=30 Score=24.03 Aligned_cols=26 Identities=8% Similarity=0.170 Sum_probs=21.4
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
+...|..+-..|+|++|+.+|.++++
T Consensus 5 ~~~~a~~~~~~~~~~~A~~~~~~~~~ 30 (129)
T 2xev_A 5 AYNVAFDALKNGKYDDASQLFLSFLE 30 (129)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 45667788889999999999998775
No 117
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=43.73 E-value=31 Score=26.87 Aligned_cols=14 Identities=14% Similarity=-0.021 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELD 19 (246)
Q Consensus 6 ~kAi~ll~rAVe~D 19 (246)
+.|++...+|++.+
T Consensus 24 ~~A~~~~~~al~~~ 37 (228)
T 4i17_A 24 AVAFEKYSEYLKLT 37 (228)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcc
Confidence 34555555555544
No 118
>4g1t_A Interferon-induced protein with tetratricopeptide 2; ISG, all alpha helix, antivirus, antiviral protein; 2.80A {Homo sapiens}
Probab=43.62 E-value=84 Score=27.14 Aligned_cols=22 Identities=14% Similarity=0.196 Sum_probs=17.0
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH
Q psy1410 15 AVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 15 AVe~D~~g~y~EAl~lY~eaIe 36 (246)
|.-+...|+|++|+.+|++|++
T Consensus 341 g~~~~~~~~~~~A~~~~~kaL~ 362 (472)
T 4g1t_A 341 ASLHALADQYEEAEYYFQKEFS 362 (472)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHhccHHHHHHHHHHHHh
Confidence 3445688999999988888875
No 119
>3k1s_A PTS system, cellobiose-specific IIA component; all alpha protein, spectrin repeat-like, transferase, structural genomics; HET: MSE; 2.30A {Bacillus anthracis} SCOP: a.7.2.0
Probab=43.33 E-value=49 Score=25.57 Aligned_cols=35 Identities=11% Similarity=0.164 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVTELLKH 41 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~ 41 (246)
.|.+.+-+|++.=++|+|++|-.+..+|=+.|..+
T Consensus 21 ~Ars~~~eAl~~Ak~gdfe~A~~~l~eA~~~l~~A 55 (109)
T 3k1s_A 21 NARSFAMEALQFAKQGKMAEADEAMVKAKEAINEA 55 (109)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 68889999999999999999999999998777765
No 120
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=43.13 E-value=40 Score=23.92 Aligned_cols=24 Identities=8% Similarity=0.131 Sum_probs=17.1
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 13 IRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 13 ~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.-|..+.+.|++++|+.+|++|+.
T Consensus 51 ~L~~~~~~~g~~~~A~~~~~~al~ 74 (104)
T 2v5f_A 51 YLSYAVYQQGDLDKALLLTKKLLE 74 (104)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHccCHHHHHHHHHHHHh
Confidence 345555677888888888888765
No 121
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=43.10 E-value=89 Score=27.58 Aligned_cols=29 Identities=7% Similarity=0.074 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
+.-+...|.-+-+.|+|++|+.+|.+||+
T Consensus 273 ~~~~~nla~~~~~~g~~~~A~~~~~~al~ 301 (370)
T 1ihg_A 273 LSCVLNIGACKLKMSDWQGAVDSCLEALE 301 (370)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHH
Confidence 44455555556666666666666666554
No 122
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=42.69 E-value=30 Score=28.95 Aligned_cols=32 Identities=16% Similarity=0.342 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHHHHhc-----------------CCHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDER-----------------GRWTESLTFYQDGVT 36 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~-----------------g~y~EAl~lY~eaIe 36 (246)
.+.|++...+|++.+.. |++++|+.+|.++++
T Consensus 193 ~~~A~~~~~~al~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~ 241 (365)
T 4eqf_A 193 LEGVKELYLEAAHQNGDMIDPDLQTGLGVLFHLSGEFNRAIDAFNAALT 241 (365)
T ss_dssp HHHHHHHHHHHHHHSCSSCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCccCHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 34566666666665443 777777777777665
No 123
>1elr_A TPR2A-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, protein binding, chaperone; 1.90A {Homo sapiens} SCOP: a.118.8.1 PDB: 3esk_A 3fwv_A
Probab=41.99 E-value=46 Score=22.48 Aligned_cols=25 Identities=8% Similarity=0.279 Sum_probs=16.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 12 LIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 12 l~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
...|.-+-..|++++|+.+|.++++
T Consensus 83 ~~la~~~~~~~~~~~A~~~~~~~~~ 107 (131)
T 1elr_A 83 ARIGNSYFKEEKYKDAIHFYNKSLA 107 (131)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHHH
Confidence 3444555566777777777777665
No 124
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=41.63 E-value=18 Score=27.66 Aligned_cols=30 Identities=17% Similarity=0.158 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGV 35 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaI 35 (246)
..++.+...|..+-..|+|++|+.+|.+++
T Consensus 4 ~~~~~~~~~g~~~~~~~~~~~A~~~~~~a~ 33 (213)
T 1hh8_A 4 VEAISLWNEGVLAADKKDWKGALDAFSAVQ 33 (213)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHTSS
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHc
Confidence 456677777888888888888888877764
No 125
>1pc2_A Mitochondria fission protein; unknown function; NMR {Homo sapiens} SCOP: a.118.8.1
Probab=41.61 E-value=73 Score=25.73 Aligned_cols=59 Identities=8% Similarity=0.099 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHH-h----cCCHHHHHHH-----HHHHHHHHHHHhhcCCChhHHHHHHHHHHHHH
Q psy1410 4 SIELAQFLLIRAVELD-E----RGRWTESLTF-----YQDGVTELLKHVRGLSNKGDQQKIRDKIETYI 62 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D-~----~g~y~EAl~l-----Y~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm 62 (246)
..++|+.++...++.| . .--|.-|+-+ |.+|.+++-.+++.+|+...-..+++.|..=+
T Consensus 50 ~~~~gI~lLe~ll~~~~p~~~rd~lY~LAv~~~kl~~Y~~A~~y~~~lL~ieP~n~QA~~Lk~~ie~~~ 118 (152)
T 1pc2_A 50 DIRKGIVLLEELLPKGSKEEQRDYVFYLAVGNYRLKEYEKALKYVRGLLQTEPQNNQAKELERLIDKAM 118 (152)
T ss_dssp HHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHTSCHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCccchHHHHHHHHHHHHHccCHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 3568888888888876 1 2234445544 45777888888888887766666666555433
No 126
>2vkj_A TM1634; membrane protein, TPR motif joint center for structural GENO JCSG, structural genomics; 1.65A {Thermotoga maritima} PDB: 2vko_A*
Probab=41.54 E-value=47 Score=25.46 Aligned_cols=42 Identities=19% Similarity=0.280 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHH
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKI 54 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~l 54 (246)
.+|..++-.|-.+=+.|+|.+|+.++.++.. ...||..++..
T Consensus 51 ~~~r~~i~eak~~y~~~ny~ea~~l~~k~~n-------~ten~~i~ki~ 92 (106)
T 2vkj_A 51 KKARSLIAEGKDLFETANYGEALVFFEKALN-------LSDNEEIKKIA 92 (106)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHH-------HCCCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhcchhHHHHHHHHHHc-------cccCHHHHHHH
Confidence 5789999999999999999999999888653 24566665543
No 127
>1usy_A ATP phosphoribosyltransferase regulatory subunit; aminoacyl-tRNA synthetase; HET: HIS; 2.52A {Thermotoga maritima} SCOP: d.104.1.1 PDB: 1usy_C*
Probab=41.46 E-value=15 Score=32.00 Aligned_cols=35 Identities=23% Similarity=0.442 Sum_probs=27.0
Q ss_pred HHHHHHHHHHHHh-ccCcEEEEEecCCccceEEEecCCeEEEeCCccccccc
Q psy1410 165 QEENLKQLQESLR-KMKITLNINYSNTLHDREIVLSNDWVIKIGRGLDIFCH 215 (246)
Q Consensus 165 q~~~l~~i~~sl~-~~gi~l~~~~~~tiHDR~I~~dnGw~IkigRGLd~fq~ 215 (246)
-.+.|+++.+.|. ..| ...+.||.+ +.||||||-.
T Consensus 201 ~l~~l~~l~~~l~~~~g-~~~~~~D~~---------------lvRgldYYtG 236 (275)
T 1usy_A 201 VREDLLSASSFLQEKFP-TVSVEIDLT---------------LARTIEEYCG 236 (275)
T ss_dssp HHHHHHHHHHHHHHHCS-SSEEEECCC---------------CGGGGGTCSS
T ss_pred HHHHHHHHHHHHHHhcC-CCeEEEecc---------------ccCCCCccCC
Confidence 3788999999999 888 335556653 5899999985
No 128
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=41.36 E-value=32 Score=29.75 Aligned_cols=32 Identities=19% Similarity=0.250 Sum_probs=27.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
+.+..+...|..+-+.|+|++|+.+|.+|+++
T Consensus 145 ~~a~~~~~~g~~~~~~g~~~~A~~~y~~Al~~ 176 (336)
T 1p5q_A 145 EQSTIVKERGTVYFKEGKYKQALLQYKKIVSW 176 (336)
T ss_dssp HHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
Confidence 35667778899999999999999999999975
No 129
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=41.15 E-value=45 Score=30.63 Aligned_cols=31 Identities=19% Similarity=0.140 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHHH---------------hcCCHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELD---------------ERGRWTESLTFYQDGVT 36 (246)
Q Consensus 6 ~kAi~ll~rAVe~D---------------~~g~y~EAl~lY~eaIe 36 (246)
++|++...+|++.+ +.|+|++|+.+|++|++
T Consensus 23 ~~A~~~~~~Al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 68 (477)
T 1wao_1 23 ENAIKFYSQAIELNPSNAIYYGNRSLAYLRTECYGYALGDATRAIE 68 (477)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCccHHHHHHHHHHHHHhcCHHHHHHHHHHHHH
Confidence 45666666665554 35777777777766664
No 130
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=40.97 E-value=94 Score=25.73 Aligned_cols=32 Identities=16% Similarity=0.252 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
..+..+...|..+-..|+|++|+.+|+++++.
T Consensus 7 ~~~~~l~~~g~~~~~~g~~~~A~~~~~~al~~ 38 (406)
T 3sf4_A 7 ASCLELALEGERLCKSGDCRAGVSFFEAAVQV 38 (406)
T ss_dssp CCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccHHHHHHHHHHHHhc
Confidence 35677889999999999999999999999975
No 131
>2kck_A TPR repeat; tetratricopeptide repeat, structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Methanococcus maripaludis}
Probab=40.88 E-value=29 Score=22.92 Aligned_cols=16 Identities=25% Similarity=0.262 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHHh
Q psy1410 5 IELAQFLLIRAVELDE 20 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~ 20 (246)
.+.|+....+|++.+.
T Consensus 22 ~~~A~~~~~~a~~~~~ 37 (112)
T 2kck_A 22 YTESIDLFEKAIQLDP 37 (112)
T ss_dssp HHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 4678889999988764
No 132
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=40.24 E-value=1.1e+02 Score=22.58 Aligned_cols=56 Identities=16% Similarity=0.297 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHHHh---------------cCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDE---------------RGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKG 70 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~---------------~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~ 70 (246)
+.|+..+.+|++.+. .|++++|+.+|.+ +++..|+...+. .+...+++|..+..
T Consensus 98 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~-------al~~~p~~~~~~----~~~~~i~~~~~~~~ 166 (177)
T 2e2e_A 98 AQTRAMIDKALALDSNEITALMLLASDAFMQANYAQAIELWQK-------VMDLNSPRINRT----QLVESINMAKLLQR 166 (177)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHH-------HHHTCCTTSCHH----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcHHHHHHHHHHHHHcccHHHHHHHHHH-------HHhhCCCCccHH----HHHHHHHHHHHhcC
Confidence 456666666665543 4455555444444 444454433322 23344667777666
Q ss_pred hh
Q psy1410 71 KL 72 (246)
Q Consensus 71 ~l 72 (246)
..
T Consensus 167 ~~ 168 (177)
T 2e2e_A 167 RS 168 (177)
T ss_dssp HH
T ss_pred CC
Confidence 54
No 133
>2lni_A Stress-induced-phosphoprotein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, chaperone; NMR {Homo sapiens}
Probab=39.65 E-value=48 Score=22.62 Aligned_cols=22 Identities=14% Similarity=0.089 Sum_probs=9.7
Q ss_pred HHHHHHhcCCHHHHHHHHHHHH
Q psy1410 14 RAVELDERGRWTESLTFYQDGV 35 (246)
Q Consensus 14 rAVe~D~~g~y~EAl~lY~eaI 35 (246)
.|.-+-..|++++|+.+|.+++
T Consensus 56 la~~~~~~~~~~~A~~~~~~a~ 77 (133)
T 2lni_A 56 RAACYTKLLEFQLALKDCEECI 77 (133)
T ss_dssp HHHHHTTTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhccHHHHHHHHHHHH
Confidence 3334444444444444444443
No 134
>3mv2_A Coatomer subunit alpha; vesicular membrane coat COAT protein complex I, protein TRAN; 2.90A {Saccharomyces cerevisiae} PDB: 3mv3_A
Probab=39.38 E-value=52 Score=30.12 Aligned_cols=55 Identities=7% Similarity=0.065 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh-hcCCChhHHHHHHHHHHHHHH
Q psy1410 9 QFLLIRAVELDERGRWTESLTFYQDGVTELLKHV-RGLSNKGDQQKIRDKIETYIN 63 (246)
Q Consensus 9 i~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~l-k~e~d~~kK~~lr~Ki~eYm~ 63 (246)
.+.++.|-++=.+|+++||+..+.+.|..+.-.+ ..+.+...-+.+..-+.||+-
T Consensus 115 ~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icrEYil 170 (325)
T 3mv2_A 115 NEKMNEGYKNFKLNKPDIAIECFREAIYRITLLMVDDAEDEKLAHKILETAREYIL 170 (325)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTCCBCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhheeeeccHHHHHHHHHHHHHHHHHHH
Confidence 3467888899999999999999999886544333 222334444557777888875
No 135
>4i17_A Hypothetical protein; TPR repeats protein, structural genomics, joint center for S genomics, JCSG, protein structure initiative; HET: MSE; 1.83A {Bacteroides fragilis}
Probab=39.37 E-value=1.3e+02 Score=23.20 Aligned_cols=41 Identities=7% Similarity=0.088 Sum_probs=23.5
Q ss_pred HHhcCCHHHHHHHHHHHHHHHHHHhhcCCChh--HHHHHHHHHHHHHHHHHH
Q psy1410 18 LDERGRWTESLTFYQDGVTELLKHVRGLSNKG--DQQKIRDKIETYINRAEV 67 (246)
Q Consensus 18 ~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~--kK~~lr~Ki~eYm~RAE~ 67 (246)
.-..|+|++|+.+|.++++ . +|. .-..+.....-|+..+..
T Consensus 127 ~~~~~~~~~A~~~~~~al~-------~--~p~~~~~~~~~~l~~~~~~~~~~ 169 (228)
T 4i17_A 127 FQQAGNIEKAEENYKHATD-------V--TSKKWKTDALYSLGVLFYNNGAD 169 (228)
T ss_dssp HHHTTCHHHHHHHHHHHTT-------S--SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccHHHHHHHHHHHHh-------c--CCCcccHHHHHHHHHHHHHHHHH
Confidence 3345666666666666654 3 344 445566666666666655
No 136
>3hym_B Cell division cycle protein 16 homolog; APC, anaphase promoting complex, cell cycle, mitosis, cyclosome, TPR, ubiquitin, ubiquitin ligase, twinning; 2.80A {Homo sapiens}
Probab=38.71 E-value=49 Score=26.59 Aligned_cols=18 Identities=11% Similarity=0.349 Sum_probs=14.6
Q ss_pred hcCCHHHHHHHHHHHHHH
Q psy1410 20 ERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 20 ~~g~y~EAl~lY~eaIe~ 37 (246)
..|++++|+.+|.++++.
T Consensus 248 ~~g~~~~A~~~~~~a~~~ 265 (330)
T 3hym_B 248 KLKKYAEALDYHRQALVL 265 (330)
T ss_dssp HTTCHHHHHHHHHHHHHH
T ss_pred HhcCHHHHHHHHHHHHhh
Confidence 568889998888888864
No 137
>2kat_A Uncharacterized protein; NESG, structure, structural genomics, PSI-2, protein structure initiative; NMR {Bordetella parapertussis}
Probab=38.67 E-value=44 Score=23.09 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHH---------------hcCCHHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELD---------------ERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 6 ~kAi~ll~rAVe~D---------------~~g~y~EAl~lY~eaIe~ 37 (246)
+.|+....+|++.+ ..|++++|+.+|+++++.
T Consensus 36 ~~A~~~~~~al~~~p~~~~~~~~la~~~~~~g~~~~A~~~~~~al~~ 82 (115)
T 2kat_A 36 DAALPHLRAALDFDPTYSVAWKWLGKTLQGQGDRAGARQAWESGLAA 82 (115)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 45666666666655 467888888888888764
No 138
>4ga2_A E3 SUMO-protein ligase ranbp2; TPR motif, nuclear pore complex component nucleocytoplasmic transport, transport protein; 0.95A {Pan troglodytes} PDB: 4ga0_A 4ga1_A*
Probab=38.67 E-value=34 Score=25.61 Aligned_cols=15 Identities=7% Similarity=-0.029 Sum_probs=7.5
Q ss_pred HHHHHHHHHHHhhcC
Q psy1410 31 YQDGVTELLKHVRGL 45 (246)
Q Consensus 31 Y~eaIe~Ll~~lk~e 45 (246)
|.+|++.|-.+++..
T Consensus 47 ~~~A~~~~~~al~~~ 61 (150)
T 4ga2_A 47 YDLAKKYICTYINVQ 61 (150)
T ss_dssp HHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhC
Confidence 345555555555443
No 139
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=38.36 E-value=32 Score=28.79 Aligned_cols=16 Identities=6% Similarity=0.210 Sum_probs=9.4
Q ss_pred cCCHHHHHHHHHHHHH
Q psy1410 21 RGRWTESLTFYQDGVT 36 (246)
Q Consensus 21 ~g~y~EAl~lY~eaIe 36 (246)
.|++++|..+|..|++
T Consensus 182 ~~~~~~A~~~~~~al~ 197 (308)
T 2ond_A 182 SKDKSVAFKIFELGLK 197 (308)
T ss_dssp SCCHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHH
Confidence 4566666666666554
No 140
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=37.82 E-value=68 Score=23.86 Aligned_cols=29 Identities=10% Similarity=-0.032 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
+..+...|.-+-..|++++|+.+|.+|++
T Consensus 107 ~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 135 (203)
T 3gw4_A 107 SANAYEVATVALHFGDLAGARQEYEKSLV 135 (203)
T ss_dssp HHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 34445555556666667777666666664
No 141
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=37.65 E-value=37 Score=27.25 Aligned_cols=15 Identities=13% Similarity=0.368 Sum_probs=7.0
Q ss_pred cCCHHHHHHHHHHHH
Q psy1410 21 RGRWTESLTFYQDGV 35 (246)
Q Consensus 21 ~g~y~EAl~lY~eaI 35 (246)
.|++++|+.+|++|+
T Consensus 91 ~~~~~~A~~~~~~a~ 105 (273)
T 1ouv_A 91 SQNTNKALQYYSKAC 105 (273)
T ss_dssp CCCHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHH
Confidence 444444444444444
No 142
>3u64_A Protein TP_0956; tetratrico peptide repeat, protein-prote interaction, syphilis, lipoprotein, transport protein; 2.30A {Treponema pallidum subsp} PDB: 4di3_A 4di4_A*
Probab=37.57 E-value=41 Score=30.45 Aligned_cols=33 Identities=21% Similarity=0.264 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHhc----------------------CCHHHHHHHHHHHHH
Q psy1410 4 SIELAQFLLIRAVELDER----------------------GRWTESLTFYQDGVT 36 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~----------------------g~y~EAl~lY~eaIe 36 (246)
.+..|..++.||+++|.. |+.+.|-.+|++||+
T Consensus 178 ~l~~A~a~lerAleLDP~~~~GsA~~~LG~lY~~vPp~~gGd~ekA~~~ferAL~ 232 (301)
T 3u64_A 178 TVHAAVMMLERACDLWPSYQEGAVWNVLTKFYAAAPESFGGGMEKAHTAFEHLTR 232 (301)
T ss_dssp HHHHHHHHHHHHHHHCTTHHHHHHHHHHHHHHHHSCTTTTCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHhCCCccCCCHHHHHHHHHHHHH
Confidence 356899999999999997 666666666666665
No 143
>1ouv_A Conserved hypothetical secreted protein; TPR repeat, HCP repeat, cysteine rich protein, loop-helix-TU repeat protein, hydrolase; 2.00A {Helicobacter pylori} SCOP: a.118.18.1
Probab=37.24 E-value=38 Score=27.19 Aligned_cols=32 Identities=9% Similarity=0.283 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHHHH-------------h----cCCHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELD-------------E----RGRWTESLTFYQDGVT 36 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D-------------~----~g~y~EAl~lY~eaIe 36 (246)
.++|++..++|++.+ . .|++++|+.+|+.|++
T Consensus 94 ~~~A~~~~~~a~~~~~~~a~~~lg~~~~~~~~~~~~~~~A~~~~~~a~~ 142 (273)
T 1ouv_A 94 TNKALQYYSKACDLKYAEGCASLGGIYHDGKVVTRDFKKAVEYFTKACD 142 (273)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHCSSSCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCccHHHHHHHHHHcCCCcccCHHHHHHHHHHHHh
Confidence 345666666665543 3 8888888888888876
No 144
>3uoi_A Bacterioferritin, BFR; structural genomics, TB structural genomics consortium, TBSG ferroxidation and iron storage, cytosol; HET: HEM; 1.90A {Mycobacterium tuberculosis} PDB: 3uof_A* 3qb9_A* 2wtl_A* 3bkn_A*
Probab=37.10 E-value=1.4e+02 Score=22.80 Aligned_cols=54 Identities=15% Similarity=0.177 Sum_probs=40.3
Q ss_pred HHHHHHHHHHHHHHHH---hhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy1410 26 ESLTFYQDGVTELLKH---VRGLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMG 79 (246)
Q Consensus 26 EAl~lY~eaIe~Ll~~---lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g 79 (246)
.|+..+..+++.+..+ ...+.|+...+.+..-+.+....+.-|..+++.-+..|
T Consensus 91 ~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i~~~g 147 (161)
T 3uoi_A 91 ADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLG 147 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 4555555555554444 34468999999999999999999999999998765555
No 145
>2qqy_A Sigma B operon; dodecameric alpha-helical, ferritin fold, structural genomic protein structure initiative; 2.00A {Bacillus anthracis str}
Probab=36.24 E-value=1.3e+02 Score=22.35 Aligned_cols=51 Identities=18% Similarity=0.089 Sum_probs=37.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhc---CCChhHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1410 24 WTESLTFYQDGVTELLKHVRG---LSNKGDQQKIRDKIETYINRAEVLKGKLDE 74 (246)
Q Consensus 24 y~EAl~lY~eaIe~Ll~~lk~---e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~ 74 (246)
++.|+...+.++..+..++.. +.|+..++.+..-+.+....+..|..++.+
T Consensus 90 l~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~ 143 (149)
T 2qqy_A 90 LEYARQSEYETIKRYEKRKEQAANLNMTELVVKLEDMIADETNHMEELDRLLND 143 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 445555566666555555543 689999999999999999999999888753
No 146
>2qfc_A PLCR protein; TPR, HTH, transcription regulation; 2.60A {Bacillus thuringiensis serovar ISRAELE35646}
Probab=36.12 E-value=47 Score=27.38 Aligned_cols=14 Identities=7% Similarity=0.036 Sum_probs=11.0
Q ss_pred HHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVEL 18 (246)
Q Consensus 5 ~~kAi~ll~rAVe~ 18 (246)
.++|++...+|++.
T Consensus 171 ~~~A~~~~~kal~~ 184 (293)
T 2qfc_A 171 LKKGIDLFEQILKQ 184 (293)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 45788888888865
No 147
>2dba_A Smooth muscle cell associated protein-1, isoform 2; tetratricopeptide repeat, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=35.90 E-value=66 Score=22.42 Aligned_cols=27 Identities=11% Similarity=-0.063 Sum_probs=17.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
+...|.-+-..|+|++|+.+|.++++.
T Consensus 68 ~~~~a~~~~~~~~~~~A~~~~~~~~~~ 94 (148)
T 2dba_A 68 HRNRAACHLKLEDYDKAETEASKAIEK 94 (148)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccHHHHHHHHHHHHhh
Confidence 344455555677888888888777753
No 148
>3gw4_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG, DRR162B; 2.49A {Deinococcus radiodurans R1}
Probab=35.80 E-value=76 Score=23.58 Aligned_cols=29 Identities=14% Similarity=0.174 Sum_probs=19.1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVTELL 39 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll 39 (246)
+...|.-+-..|++++|+.+|.+|++.+-
T Consensus 69 ~~~l~~~~~~~g~~~~A~~~~~~al~~~~ 97 (203)
T 3gw4_A 69 LHQVGMVERMAGNWDAARRCFLEERELLA 97 (203)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 33444445567788888888888777543
No 149
>1elw_A TPR1-domain of HOP; HOP, TPR-domain, peptide-complex, helical repeat, HSP70, protein binding, chaperone; 1.60A {Homo sapiens} SCOP: a.118.8.1
Probab=35.39 E-value=57 Score=21.48 Aligned_cols=31 Identities=19% Similarity=0.193 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHH---------------hcCCHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELD---------------ERGRWTESLTFYQDGVT 36 (246)
Q Consensus 6 ~kAi~ll~rAVe~D---------------~~g~y~EAl~lY~eaIe 36 (246)
+.|+....+|++.+ ..|+|++|+.+|.++++
T Consensus 21 ~~A~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~A~~~~~~~~~ 66 (118)
T 1elw_A 21 DDALQCYSEAIKLDPHNHVLYSNRSAAYAKKGDYQKAYEDGCKTVD 66 (118)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCCcHHHHHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 45666666666554 45777777777777765
No 150
>2vyi_A SGTA protein; chaperone, TPR repeat, phosphoprotein, tetratricopeptide repeat protein, HOST-virus interaction; 2.4A {Homo sapiens} SCOP: k.38.1.1
Probab=35.17 E-value=64 Score=21.63 Aligned_cols=22 Identities=14% Similarity=0.311 Sum_probs=10.0
Q ss_pred HHHHHHhcCCHHHHHHHHHHHH
Q psy1410 14 RAVELDERGRWTESLTFYQDGV 35 (246)
Q Consensus 14 rAVe~D~~g~y~EAl~lY~eaI 35 (246)
.|.-+-..|++++|+.+|.+++
T Consensus 52 ~a~~~~~~~~~~~A~~~~~~~~ 73 (131)
T 2vyi_A 52 RAAAYSKLGNYAGAVQDCERAI 73 (131)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHhhchHHHHHHHHHHH
Confidence 3334444444444444444444
No 151
>2k0m_A Uncharacterized protein; structural genomics, unknown function, PSI-2, protein structure initiative; NMR {Rhodospirillum rubrum atcc 11170}
Probab=34.71 E-value=6 Score=30.60 Aligned_cols=30 Identities=27% Similarity=0.427 Sum_probs=19.3
Q ss_pred eEEEeCCcccccccC-CCcccccC------------CCCCccccc
Q psy1410 202 WVIKIGRGLDIFCHV-PEFSIGFT------------DLSLRPCKE 233 (246)
Q Consensus 202 w~IkigRGLd~fq~~-~~f~lg~~------------~~~~R~c~e 233 (246)
+--|||-|+|.|+-- ..| |.+ |+++|+|.+
T Consensus 55 ~~~KiG~Gi~~i~V~~h~~--~srCFfvvR~DGt~~DFSy~KCv~ 97 (104)
T 2k0m_A 55 ATSKIGPGVRNFEVRSADY--GTQCFWILRTDGSEERFSYKKCVL 97 (104)
T ss_dssp HHHHHTTCEEEEEEEESSS--SCEEEEEEETTSCEEECCGGGSSC
T ss_pred HHHhcCCCcceEEEecCCC--CCcEEEEEEeCCCeeeeeHHHHhh
Confidence 456788888888742 211 332 888888865
No 152
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=34.56 E-value=1.6e+02 Score=22.68 Aligned_cols=33 Identities=21% Similarity=0.189 Sum_probs=24.9
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q psy1410 10 FLLIRAVELDERGRWTESLTFYQDGVTELLKHV 42 (246)
Q Consensus 10 ~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~l 42 (246)
.+...|.-+-..|++++|+.+|.+|++..-...
T Consensus 87 ~~~~l~~~~~~~g~~~~A~~~~~~al~~~~~~~ 119 (283)
T 3edt_B 87 TLNNLAVLYGKRGKYKEAEPLCKRALEIREKVL 119 (283)
T ss_dssp HHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHc
Confidence 344455566678999999999999998765543
No 153
>3rac_A Histidine-tRNA ligase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, PSI-BIO; 2.30A {Alicyclobacillus acidocaldarius subsp}
Probab=34.15 E-value=17 Score=33.23 Aligned_cols=38 Identities=18% Similarity=0.249 Sum_probs=27.8
Q ss_pred HHHHHHHHHHHHHHhccCc-EEEEEecCCccceEEEecCCeEEEeCCccccccc
Q psy1410 163 VKQEENLKQLQESLRKMKI-TLNINYSNTLHDREIVLSNDWVIKIGRGLDIFCH 215 (246)
Q Consensus 163 ~~q~~~l~~i~~sl~~~gi-~l~~~~~~tiHDR~I~~dnGw~IkigRGLd~fq~ 215 (246)
..-.+.|+++.+.|...|| .-.+.||.+ +.||||||-.
T Consensus 278 ~~al~~l~~l~~~L~~~gi~~~~i~~D~~---------------lvRgldYYTG 316 (373)
T 3rac_A 278 RDAWRYLCRLAEALHDSGLASDVVTFDLA---------------LHRELDYYTG 316 (373)
T ss_dssp HHHHHHHHHHHHHHHHHTCCTTTEEECTT---------------CCCSCTTCCS
T ss_pred HHHHHHHHHHHHHHHHcCCCCceEEEeCC---------------ccCCCCccCC
Confidence 4457788999999999998 333445543 5799999874
No 154
>3od1_A ATP phosphoribosyltransferase regulatory subunit; structural genomics, PSI-2, protein structure initiative; 1.97A {Bacillus halodurans}
Probab=33.29 E-value=20 Score=33.18 Aligned_cols=39 Identities=8% Similarity=0.110 Sum_probs=28.4
Q ss_pred hHHHHHHHHHHHHHHhccCcEEEEEecCCccceEEEecCCeEEEeCCccccccc
Q psy1410 162 RVKQEENLKQLQESLRKMKITLNINYSNTLHDREIVLSNDWVIKIGRGLDIFCH 215 (246)
Q Consensus 162 ~~~q~~~l~~i~~sl~~~gi~l~~~~~~tiHDR~I~~dnGw~IkigRGLd~fq~ 215 (246)
..+-.+.|++|.+.|...||.-.+.||. .+-||||||-.
T Consensus 242 ~~~~l~~l~~l~~~L~~~gi~~~~~~D~---------------~lvRgldYYTG 280 (400)
T 3od1_A 242 GKTALAEMTKLYEVLESYGASEYVKFDL---------------TLVLHMSYYTG 280 (400)
T ss_dssp HHHHHHHHHHHHHHHHHTTCGGGEEEET---------------TCCSCSSSCCS
T ss_pred hHHHHHHHHHHHHHHHHcCCCceEEEeC---------------CccCCCcccCC
Confidence 3445778999999999999863344544 35799999875
No 155
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=33.10 E-value=1.8e+02 Score=22.88 Aligned_cols=36 Identities=14% Similarity=0.266 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKH 41 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~ 41 (246)
..+..+...|..+-..|++++|+.+|.++++++-..
T Consensus 25 ~~~~~~~~l~~~~~~~g~~~~A~~~~~~a~~~~~~~ 60 (311)
T 3nf1_A 25 ARLRTLHNLVIQYASQGRYEVAVPLCKQALEDLEKT 60 (311)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 345667778888899999999999999999865544
No 156
>3edt_B KLC 2, kinesin light chain 2; superhelical, structural genomics, structural genomics conso SGC, microtubule, motor protein, phosphoprotein; 2.70A {Homo sapiens} PDB: 3ceq_A
Probab=33.06 E-value=1.7e+02 Score=22.52 Aligned_cols=41 Identities=12% Similarity=0.188 Sum_probs=26.4
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHH
Q psy1410 14 RAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIR 55 (246)
Q Consensus 14 rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr 55 (246)
.|.-+-..|++++|+.+|.++++.+.... ...++..-..+.
T Consensus 133 la~~~~~~g~~~~A~~~~~~al~~~~~~~-~~~~~~~~~~~~ 173 (283)
T 3edt_B 133 LALLCQNQGKAEEVEYYYRRALEIYATRL-GPDDPNVAKTKN 173 (283)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHHHS-CTTCHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHHhc-CCCCHHHHHHHH
Confidence 34444568999999999999998765543 223444333333
No 157
>1z7m_A ATP phosphoribosyltransferase regulatory subunit; ATP-PRT, histidine biosynthesis, hiszg, alloste evolution; 2.90A {Lactococcus lactis} SCOP: d.104.1.1 PDB: 1z7n_A*
Probab=32.25 E-value=31 Score=31.05 Aligned_cols=35 Identities=20% Similarity=0.295 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHHHHhccCcEEEEEecCCccceEEEecCCeEEEeCCccccccc
Q psy1410 163 VKQEENLKQLQESLRKMKITLNINYSNTLHDREIVLSNDWVIKIGRGLDIFCH 215 (246)
Q Consensus 163 ~~q~~~l~~i~~sl~~~gi~l~~~~~~tiHDR~I~~dnGw~IkigRGLd~fq~ 215 (246)
.+-.+.|+++.+.|...| .+.||.+ +.||||||-.
T Consensus 253 ~~~l~~l~~l~~~L~~~g---~~~~D~~---------------lvrgldYYtG 287 (344)
T 1z7m_A 253 ISSFDQLKEFSEKLSMIK---PIIIDLG---------------MVPKMDYYTD 287 (344)
T ss_dssp HHHHHHHHHHHHHHTTTS---CCEECTT---------------CCCSSTTCCS
T ss_pred HHHHHHHHHHHHHHhhCC---CEEEeCC---------------CCCCCccCCC
Confidence 345678889999999888 4556653 4799999985
No 158
>3uq3_A Heat shock protein STI1; HSP90, peptide binding, chaperone; 2.60A {Saccharomyces cerevisiae}
Probab=32.24 E-value=1.5e+02 Score=22.49 Aligned_cols=29 Identities=14% Similarity=0.293 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
+.-+...|.-+-..|++++|+.+|.++++
T Consensus 79 ~~~~~~l~~~~~~~~~~~~A~~~~~~a~~ 107 (258)
T 3uq3_A 79 SKSFARIGNAYHKLGDLKKTIEYYQKSLT 107 (258)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcccHHHHHHHHHHHHh
Confidence 34455666777778888888888888776
No 159
>3ly7_A Transcriptional activator CADC; alpha/beta domain, alpha domain, DNA-binding, transcription regulation, transmembrane; 1.80A {Escherichia coli} PDB: 3lya_A 3ly8_A 3ly9_A
Probab=32.03 E-value=49 Score=30.63 Aligned_cols=15 Identities=27% Similarity=0.423 Sum_probs=6.8
Q ss_pred CCHHHHHHHHHHHHH
Q psy1410 22 GRWTESLTFYQDGVT 36 (246)
Q Consensus 22 g~y~EAl~lY~eaIe 36 (246)
|++++|+...+.|++
T Consensus 291 gd~d~A~~~l~rAl~ 305 (372)
T 3ly7_A 291 GKTDESYQAINTGID 305 (372)
T ss_dssp TCHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 444444444444443
No 160
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=31.81 E-value=51 Score=32.56 Aligned_cols=33 Identities=30% Similarity=0.449 Sum_probs=24.2
Q ss_pred HHHHHHHHHHHHHHH---------------hcCCHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELD---------------ERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D---------------~~g~y~EAl~lY~eaIe~ 37 (246)
.+.|+...++|++++ +.|++++|+.+|++||++
T Consensus 25 ~~eAi~~~~kAl~l~P~~~~a~~nLg~~l~~~g~~~eA~~~~~~Al~l 72 (723)
T 4gyw_A 25 IEEAVRLYRKALEVFPEFAAAHSNLASVLQQQGKLQEALMHYKEAIRI 72 (723)
T ss_dssp HHHHHHHHHHHHHHCSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 456777777777765 468888888888888763
No 161
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=31.69 E-value=1.8e+02 Score=24.87 Aligned_cols=16 Identities=6% Similarity=0.015 Sum_probs=7.4
Q ss_pred cCCHHHHHHHHHHHHH
Q psy1410 21 RGRWTESLTFYQDGVT 36 (246)
Q Consensus 21 ~g~y~EAl~lY~eaIe 36 (246)
.|+|++|+.+|++|++
T Consensus 243 ~g~~~~A~~~~~~al~ 258 (336)
T 1p5q_A 243 VNDFELARADFQKVLQ 258 (336)
T ss_dssp TTCHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHH
Confidence 3444444444444443
No 162
>3u3w_A Transcriptional activator PLCR protein; ternary complex, PLCR-PAPR7-DNA, HTH DNA-binding domain, QUO sensing; 2.40A {Bacillus thuringiensis} PDB: 2qfc_A
Probab=31.54 E-value=66 Score=26.45 Aligned_cols=27 Identities=15% Similarity=0.206 Sum_probs=20.3
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHH
Q psy1410 13 IRAVELDERGRWTESLTFYQDGVTELL 39 (246)
Q Consensus 13 ~rAVe~D~~g~y~EAl~lY~eaIe~Ll 39 (246)
.-|.-.-..|+|++|+.+|++|++.+-
T Consensus 160 ~lg~~y~~~g~~~~A~~~~~~al~~~~ 186 (293)
T 3u3w_A 160 AIANIYAENGYLKKGIDLFEQILKQLE 186 (293)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 334445677899999999999998553
No 163
>1hh8_A P67PHOX, NCF-2, neutrophil cytosol factor 2; cell cycle, phagocyte oxidase factor, SH3 domain, repeat, TPR repeat cell cycle; HET: FLC; 1.8A {Homo sapiens} SCOP: a.118.8.1 PDB: 1wm5_A 1e96_B*
Probab=31.27 E-value=67 Score=24.34 Aligned_cols=27 Identities=7% Similarity=-0.016 Sum_probs=21.0
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
+...|..+-..|+|++|+.+|.+|++.
T Consensus 40 ~~~lg~~~~~~g~~~~A~~~~~~al~~ 66 (213)
T 1hh8_A 40 CFNIGCMYTILKNMTEAEKAFTRSINR 66 (213)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 445566677889999999999988864
No 164
>3rjv_A Putative SEL1 repeat protein; alpha-alpha superhelix, structural genomics, joint center FO structural genomics, JCSG; HET: MSE; 1.65A {Klebsiella pneumoniae subsp}
Probab=31.13 E-value=35 Score=27.06 Aligned_cols=15 Identities=20% Similarity=0.286 Sum_probs=9.0
Q ss_pred cCCHHHHHHHHHHHH
Q psy1410 21 RGRWTESLTFYQDGV 35 (246)
Q Consensus 21 ~g~y~EAl~lY~eaI 35 (246)
.+++++|+.+|+.|+
T Consensus 102 ~~d~~~A~~~~~~A~ 116 (212)
T 3rjv_A 102 ATDVAHAITLLQDAA 116 (212)
T ss_dssp SCCHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHH
Confidence 566666666666554
No 165
>1xnf_A Lipoprotein NLPI; TPR, tetratricopeptide, structural genomi unknown function; 1.98A {Escherichia coli} SCOP: a.118.8.1
Probab=31.10 E-value=74 Score=24.81 Aligned_cols=28 Identities=18% Similarity=0.165 Sum_probs=19.7
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 10 FLLIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 10 ~ll~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.+...|..+-..|++++|+.+|.++++.
T Consensus 45 ~~~~l~~~~~~~~~~~~A~~~~~~al~~ 72 (275)
T 1xnf_A 45 LLYERGVLYDSLGLRALARNDFSQALAI 72 (275)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcccHHHHHHHHHHHHHc
Confidence 3344455555688999999988888863
No 166
>2wb7_A PT26-6P; extra chromosomal elements, unknown function; 2.60A {Thermococcus SP}
Probab=30.64 E-value=74 Score=31.00 Aligned_cols=31 Identities=10% Similarity=0.100 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChhHHHHHHH
Q psy1410 25 TESLTFYQDGVTELLKHVRGLSNKGDQQKIRD 56 (246)
Q Consensus 25 ~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~ 56 (246)
..|+.+|++||++|-++ +.+.|+..-..+..
T Consensus 449 ~kAi~~Y~~Ai~~L~k~-~~tdd~~~v~~~~~ 479 (526)
T 2wb7_A 449 QGAIDEYKAAINDLQKA-AQQDDYQMFLNYLN 479 (526)
T ss_dssp HHHHHHHHHHHHHHHHH-TTCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhh-hccCCHHHHHHHHH
Confidence 68999999999977766 45566655444333
No 167
>2y3q_A Bacterioferritin; metal binding protein, redox; HET: HEM; 1.55A {Escherichia coli} PDB: 1bfr_A* 1bcf_A* 2htn_A* 2vxi_A* 3e1j_A* 3e1l_A* 3e1m_A* 3e1n_A* 3e1o_A* 3e1p_A* 3ghq_A* 3e1q_A* 3e2c_A* 3isf_A* 3is8_A* 3ise_A* 3is7_A*
Probab=30.57 E-value=1.7e+02 Score=21.96 Aligned_cols=55 Identities=18% Similarity=0.238 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHHHHHHhhc---CCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy1410 25 TESLTFYQDGVTELLKHVRG---LSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMG 79 (246)
Q Consensus 25 ~EAl~lY~eaIe~Ll~~lk~---e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g 79 (246)
+.|+.....+++.+..+++. +.|+..++.+..-+.+-...+..|..++..-+..|
T Consensus 88 ~~~l~~E~~~~~~y~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l~~~g 145 (158)
T 2y3q_A 88 RSDLALELDGAKNLREAIGYADSVHDYVSRDMMIEILRDEEGHIDWLETELDLIQKMG 145 (158)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34555555555555554432 58999999999999999999999999887654444
No 168
>3mkr_B Coatomer subunit alpha; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=30.54 E-value=68 Score=29.27 Aligned_cols=61 Identities=15% Similarity=0.156 Sum_probs=40.8
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh-hcCCChhHHHHHHHHHHHHHH--HHHHHH
Q psy1410 9 QFLLIRAVELDERGRWTESLTFYQDGVTELLKHV-RGLSNKGDQQKIRDKIETYIN--RAEVLK 69 (246)
Q Consensus 9 i~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~l-k~e~d~~kK~~lr~Ki~eYm~--RAE~LK 69 (246)
.+-++.|-++=.+|+++||+..+.+.|..+.-.+ ..+.+...-+.+..-+.||+- |.|--+
T Consensus 103 ~~~Lk~gyk~~t~gKf~eAl~~Fr~iL~~i~l~~v~~~~e~~e~~eli~icreYilal~iEl~R 166 (320)
T 3mkr_B 103 IQRLQLCYQLTTVGKFEEAVEKFRSILLSVPLLVVDNKQEIAEAQQLITICREYIVGLSMETER 166 (320)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHHHGGGCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhheeeccHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3467889999999999999999999885443222 222333344457777888876 444333
No 169
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=30.32 E-value=19 Score=26.11 Aligned_cols=29 Identities=7% Similarity=0.245 Sum_probs=16.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGV 35 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaI 35 (246)
.+..+...|..+-..|++++|+.+|.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~A~~~~~~~~ 35 (186)
T 3as5_A 7 RQVYYRDKGISHAKAGRYSQAVMLLEQVY 35 (186)
T ss_dssp HHHHHHHHHHHHHHHTCHHHHHHHHTTTC
T ss_pred hhHHHHHHHHHHHHhcCHHHHHHHHHHHH
Confidence 34444555555555666666665555544
No 170
>2fkz_A Bacterioferritin; ferroxidase, DIIRON site, iron T metal binding protein; HET: HEM; 2.00A {Azotobacter vinelandii} SCOP: a.25.1.1 PDB: 2fl0_A* 1sof_A*
Probab=30.25 E-value=1.7e+02 Score=21.79 Aligned_cols=54 Identities=20% Similarity=0.348 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHHHHh---hcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy1410 26 ESLTFYQDGVTELLKHV---RGLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMG 79 (246)
Q Consensus 26 EAl~lY~eaIe~Ll~~l---k~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g 79 (246)
.|+.....+++.+..++ ..+.|+..++.+..-+.+....+..++.++..-+..|
T Consensus 89 ~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~eee~h~~~l~~~l~~i~~~g 145 (155)
T 2fkz_A 89 CDLKLEQAGLPDLKAAIAYCESVGDYASRELLEDILESEEDHIDWLETQLDLIDKIG 145 (155)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 34444444444444333 3347999999999999998888888888887644443
No 171
>1klx_A Cysteine rich protein B; structural genomics, helix-turn-helix, right handed super helix, modular structure', hydrolase; 1.95A {Helicobacter pylori} SCOP: a.118.18.1
Probab=30.24 E-value=64 Score=23.93 Aligned_cols=15 Identities=0% Similarity=0.029 Sum_probs=6.9
Q ss_pred cCCHHHHHHHHHHHH
Q psy1410 21 RGRWTESLTFYQDGV 35 (246)
Q Consensus 21 ~g~y~EAl~lY~eaI 35 (246)
.+.+++|+.+|+.|+
T Consensus 38 g~~~~~A~~~~~~Aa 52 (138)
T 1klx_A 38 QINKQKLFQYLSKAC 52 (138)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 344444555554444
No 172
>1srv_A Protein (groel (HSP60 class)); chaperone, cell division, ATP-binding, phosphorylation; 1.70A {Thermus thermophilus} SCOP: c.8.5.1
Probab=30.10 E-value=35 Score=27.87 Aligned_cols=68 Identities=13% Similarity=0.180 Sum_probs=46.1
Q ss_pred HHhhcc--cccEEEeeCCcc----cchhHHhhHHHHHHHHHhcCCCcc---------------------eEEEeecCCCC
Q psy1410 101 GRFLDE--NVEQIDVTDPYI----HNKHQCYNFLQFCELAIKNCKNVK---------------------RINLLTTYADR 153 (246)
Q Consensus 101 g~yl~~--~~~~I~ieDPYI----r~~hQ~~N~~~f~E~~v~~~~~~~---------------------~i~L~T~~d~~ 153 (246)
.||+-. .-.++.++|||| +....++-++-++|.+++....+- .+..+-...++
T Consensus 10 SpYfvtd~e~m~~~le~p~ILitdkKIs~i~~llP~LE~v~~~~~pLlIIAedvegeaLatLvvNklrg~l~v~AVKAPg 89 (145)
T 1srv_A 10 SPYFVTNPETMEAVLEDAFILIVEKKVSNVRELLPILEQVAQTGKPLLIIAEDVEGEALATLVVNKLRGTLSVAAVKAPG 89 (145)
T ss_dssp CGGGCSBTTTTBEEEEEEEEEEESSEECCHHHHHHHHHHHHTTTCCEEEEESEECHHHHHHHHHHHHTTSCCEEEEECCS
T ss_pred CceeecCccccEEEeeccEEEEecccccCHHHHHHHHHHHHHHCCCEEEEecccchhhhhhhhhhhhcccceEEEEeCCC
Confidence 578832 235799999999 567778899999999998854421 22222233344
Q ss_pred CCCccccchHHHHHHHHHHHHH
Q psy1410 154 PQHSNKTARVKQEENLKQLQES 175 (246)
Q Consensus 154 ~~~~~~~~~~~q~~~l~~i~~s 175 (246)
. ++.+++.|+.|.--
T Consensus 90 f-------Gd~Rk~~L~DiAil 104 (145)
T 1srv_A 90 F-------GDRRKEMLKDIAAV 104 (145)
T ss_dssp S-------HHHHHHHHHHHHHH
T ss_pred c-------chhhHHHHHHHHHH
Confidence 4 67788888888654
No 173
>1fch_A Peroxisomal targeting signal 1 receptor; protein-peptide complex, tetratricopeptide repeat, TPR, helical repeat, signaling protein; 2.20A {Homo sapiens} SCOP: a.118.8.1 PDB: 2j9q_A 3imz_B* 3r9a_B* 2c0m_A 2c0l_A
Probab=29.99 E-value=68 Score=26.43 Aligned_cols=33 Identities=18% Similarity=0.371 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHhc-----------------CCHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDER-----------------GRWTESLTFYQDGVTE 37 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~~-----------------g~y~EAl~lY~eaIe~ 37 (246)
.+.|+....+|++.+.. |++++|+.+|.++++.
T Consensus 197 ~~~A~~~~~~a~~~~p~~~~~~~~~~l~~~~~~~g~~~~A~~~~~~al~~ 246 (368)
T 1fch_A 197 FLEVKELFLAAVRLDPTSIDPDVQCGLGVLFNLSGEYDKAVDCFTAALSV 246 (368)
T ss_dssp HHHHHHHHHHHHHHSTTSCCHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCcccHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
No 174
>1na0_A Designed protein CTPR3; de novo protein; HET: IPT; 1.60A {Unidentified} SCOP: k.38.1.1 PDB: 2wqh_A 3kd7_A
Probab=29.63 E-value=91 Score=20.59 Aligned_cols=20 Identities=20% Similarity=0.601 Sum_probs=14.0
Q ss_pred HHHhcCCHHHHHHHHHHHHH
Q psy1410 17 ELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 17 e~D~~g~y~EAl~lY~eaIe 36 (246)
-+-..|++++|+.+|.++++
T Consensus 52 ~~~~~~~~~~A~~~~~~~~~ 71 (125)
T 1na0_A 52 AYYKQGDYDEAIEYYQKALE 71 (125)
T ss_dssp HHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHhCCHHHHHHHHHHHHH
Confidence 33456788888888877765
No 175
>3qb9_A Bacterioferritin, BFR; cytosol, structural genomics, TB structural genomics consort TBSGC, metal binding protein; HET: HEM; 2.11A {Mycobacterium tuberculosis} PDB: 2wtl_A* 3bkn_A*
Probab=29.45 E-value=2e+02 Score=22.29 Aligned_cols=55 Identities=15% Similarity=0.192 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHHHHHHHh---hcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy1410 25 TESLTFYQDGVTELLKHV---RGLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMG 79 (246)
Q Consensus 25 ~EAl~lY~eaIe~Ll~~l---k~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g 79 (246)
+.|+...+.+++.+..++ ..+.|+..++.+..-+.+....+..|.+.+..-+..|
T Consensus 90 ~~al~~E~~~~~~y~~l~~~a~~~~D~~t~~~l~~~l~eEe~h~~~l~~~l~~i~~~g 147 (174)
T 3qb9_A 90 EADLAIEYDVLNRLKPGIVMCREKQDTTSAVLLEKIVADEEEHIDYLETQLELMDKLG 147 (174)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 445555666555555555 4568999999999999998888988988887644443
No 176
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=29.28 E-value=75 Score=25.65 Aligned_cols=14 Identities=14% Similarity=0.171 Sum_probs=6.4
Q ss_pred CCHHHHHHHHHHHH
Q psy1410 22 GRWTESLTFYQDGV 35 (246)
Q Consensus 22 g~y~EAl~lY~eaI 35 (246)
|++++|+.+|.+++
T Consensus 51 ~~~~~A~~~~~~~~ 64 (359)
T 3ieg_A 51 GKSKAALPDLTKVI 64 (359)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHH
Confidence 44444444444444
No 177
>2e2e_A Formate-dependent nitrite reductase complex NRFG; TPR, cytochrome C biogenesis, O157:H7 EDL933, formate- nitrite reductase complex, lyase; 2.05A {Escherichia coli}
Probab=29.27 E-value=78 Score=23.43 Aligned_cols=26 Identities=12% Similarity=0.097 Sum_probs=19.5
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 12 LIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 12 l~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
...|.-+-..|+|++|+.+|.++++.
T Consensus 48 ~~lg~~~~~~~~~~~A~~~~~~al~~ 73 (177)
T 2e2e_A 48 ALLGEYYLWQNDYSNSLLAYRQALQL 73 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHc
Confidence 34455555789999999999998864
No 178
>1jgc_A Bacterioferritin, BFR; iron storage protein, metal binding protein; HET: HEM; 2.60A {Rhodobacter capsulatus} SCOP: a.25.1.1
Probab=28.99 E-value=1.9e+02 Score=21.84 Aligned_cols=55 Identities=9% Similarity=0.082 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHHHHhh---cCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy1410 25 TESLTFYQDGVTELLKHVR---GLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMG 79 (246)
Q Consensus 25 ~EAl~lY~eaIe~Ll~~lk---~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g 79 (246)
+.|+.....+++.+..+++ .+.|+..++.+..-+.+-...+..+..++..-+..|
T Consensus 88 ~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~ee~~h~~~l~~~l~~l~~~g 145 (161)
T 1jgc_A 88 ECDLAGEHDALKLYREARDYCAEVGDIVSKNIFESLITDEEGHVDFLETQISLYDRLG 145 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 3444445555544444443 237999999999999999999999999887654443
No 179
>3o10_A Sacsin; all-helical domain, homodimerization, chaperone; 1.90A {Homo sapiens}
Probab=28.88 E-value=79 Score=24.77 Aligned_cols=39 Identities=8% Similarity=-0.268 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHV 42 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~l 42 (246)
.+.+|...+..|-.+=+.|.|..|..+-++|+++.++++
T Consensus 12 wl~~A~~dl~~A~~~~~~g~y~~a~F~aqQA~Ek~lKa~ 50 (141)
T 3o10_A 12 WLRQARANFSAARNDLHKNANEWVCFKCYLSTKLALIAA 50 (141)
T ss_dssp HHHHHHHHHHHHGGGTTTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhhHHhhHHhhCccceEeeehhHHHHHHHHHH
Confidence 456778888888877789999999999999999988886
No 180
>2yhc_A BAMD, UPF0169 lipoprotein YFIO; essential BAM component, membrane protein; 1.80A {Escherichia coli} PDB: 3tgo_A 3q5m_A
Probab=28.56 E-value=68 Score=25.31 Aligned_cols=27 Identities=15% Similarity=0.209 Sum_probs=16.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 10 FLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 10 ~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.+...|..+-+.|+|++|+..|.++++
T Consensus 6 ~~~~~a~~~~~~g~~~~A~~~~~~~~~ 32 (225)
T 2yhc_A 6 EIYATAQQKLQDGNWRQAITQLEALDN 32 (225)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 344555566666666666666666554
No 181
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=28.41 E-value=77 Score=25.31 Aligned_cols=19 Identities=26% Similarity=0.363 Sum_probs=14.4
Q ss_pred HHhcCCHHHHHHHHHHHHH
Q psy1410 18 LDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 18 ~D~~g~y~EAl~lY~eaIe 36 (246)
+-..|++++|+.+|+++++
T Consensus 216 ~~~~~~~~~A~~~~~~a~~ 234 (327)
T 3cv0_A 216 LANGNRPQEALDAYNRALD 234 (327)
T ss_dssp HHHTTCHHHHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHH
Confidence 3457888888888888775
No 182
>2v5f_A Prolyl 4-hydroxylase subunit alpha-1; endoplasmic reticulum, metal-binding, oxidoreductase; 2.03A {Homo sapiens} PDB: 1tjc_A
Probab=28.05 E-value=99 Score=21.75 Aligned_cols=29 Identities=3% Similarity=-0.017 Sum_probs=22.5
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHHHH
Q psy1410 10 FLLIRAVELDERGRWTESLTFYQDGVTEL 38 (246)
Q Consensus 10 ~ll~rAVe~D~~g~y~EAl~lY~eaIe~L 38 (246)
+...-|..+=+.|+|..|+..|++|++.+
T Consensus 7 dc~~lG~~~~~~~~y~~A~~W~~~Al~~~ 35 (104)
T 2v5f_A 7 DCFELGKVAYTEADYYHTELWMEQALRQL 35 (104)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHccchHHHHHHHHHHHHhh
Confidence 34445666678899999999999998765
No 183
>4b4t_Q 26S proteasome regulatory subunit RPN6; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=27.92 E-value=53 Score=28.06 Aligned_cols=26 Identities=19% Similarity=0.180 Sum_probs=21.1
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.+.+|-++=+.|+|++|+..|.++++
T Consensus 7 ~l~~a~~l~~~~~y~eA~~~~~~~l~ 32 (434)
T 4b4t_Q 7 KLEEARRLVNEKQYNEAEQVYLSLLD 32 (434)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 45666667778999999999998875
No 184
>4e51_A Histidine--tRNA ligase; seattle structural genomics center for infectious disease, S aminoacylation, tRNA activation, charged tRNA; HET: HIS; 2.65A {Burkholderia thailandensis}
Probab=27.77 E-value=43 Score=31.41 Aligned_cols=34 Identities=24% Similarity=0.385 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHhccCcEEEEEecCCccceEEEecCCeEEEeCCccccccc
Q psy1410 165 QEENLKQLQESLRKMKITLNINYSNTLHDREIVLSNDWVIKIGRGLDIFCH 215 (246)
Q Consensus 165 q~~~l~~i~~sl~~~gi~l~~~~~~tiHDR~I~~dnGw~IkigRGLd~fq~ 215 (246)
-.+.|++|.+.|...||. |.||.++ -||||||-.
T Consensus 260 ~~~~l~~l~~~L~~~gi~--~~~d~~l---------------vRgl~YYtg 293 (467)
T 4e51_A 260 SRAHFEGLQRLLKANNVP--FTINPRL---------------VRGLDYYNL 293 (467)
T ss_dssp HHHHHHHHHHHHHHTTCC--EEECTTC---------------CCSCTTCCS
T ss_pred HHHHHHHHHHHHHHcCCe--EEEcCcc---------------ccCccccCC
Confidence 356789999999999986 4444432 488888875
No 185
>4aez_C MAD3, mitotic spindle checkpoint component MAD3; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=27.57 E-value=69 Score=27.70 Aligned_cols=48 Identities=19% Similarity=0.307 Sum_probs=37.3
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINR 64 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~R 64 (246)
|.-+..-|.-++..|+|++|-..|+.||+- +++| .+.|.++..++..|
T Consensus 150 AlfYe~wA~~lE~~g~~~~A~~Vy~~Gi~~-----~A~P----~~rL~~~~~~F~~R 197 (223)
T 4aez_C 150 SIFYEEYANYFESRGLFQKADEVYQKGKRM-----KAKP----FLRFQQKYQQFTHR 197 (223)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHH-----TCBS----HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHc-----CCcc----HHHHHHHHHHHHHH
Confidence 556778899999999999999999999972 2333 24477777777777
No 186
>2vq2_A PILW, putative fimbrial biogenesis and twitching motility protein; secretin, TPR repeat, type IV pilus, bacterail virulence; 1.54A {Neisseria meningitidis}
Probab=27.41 E-value=1e+02 Score=23.00 Aligned_cols=26 Identities=12% Similarity=0.086 Sum_probs=13.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
+...|..+-..|++++|+.+|.++++
T Consensus 11 ~~~~~~~~~~~~~~~~A~~~~~~~~~ 36 (225)
T 2vq2_A 11 KTQLAMEYMRGQDYRQATASIEDALK 36 (225)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 34444445555555555555555443
No 187
>3fvb_A Bacterioferritin; niaid, ssgcid, decode, structural genomics, seattle structural genomics center for infectious disease; HET: HEM; 1.81A {Brucella melitensis biovar ABORTUS2308}
Probab=27.24 E-value=1.9e+02 Score=22.99 Aligned_cols=55 Identities=16% Similarity=0.135 Sum_probs=39.9
Q ss_pred HHHHHHHHHHHHHHHHHhh---cCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy1410 25 TESLTFYQDGVTELLKHVR---GLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMG 79 (246)
Q Consensus 25 ~EAl~lY~eaIe~Ll~~lk---~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g 79 (246)
+.|+..+..+++.+..+++ .+.|+..++.|..-+.+.-..+.-|.+.++.-+..|
T Consensus 109 ~~~l~~E~~~~~~y~~~i~~A~~~~D~~t~~~L~~il~eEe~h~~~l~~~l~~i~~~g 166 (182)
T 3fvb_A 109 EADLKGEYDARASYKESREICDKLGDYVSKQLFDELLADEEGHIDFLETQLDLLAKIG 166 (182)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 3444555555554444332 458999999999999999999999999988766666
No 188
>1a17_A Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, S helix; 2.45A {Homo sapiens} SCOP: a.118.8.1 PDB: 2bug_A
Probab=26.85 E-value=1.7e+02 Score=20.65 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=10.9
Q ss_pred HhcCCHHHHHHHHHHHHH
Q psy1410 19 DERGRWTESLTFYQDGVT 36 (246)
Q Consensus 19 D~~g~y~EAl~lY~eaIe 36 (246)
-..|++++|+.+|.++++
T Consensus 92 ~~~~~~~~A~~~~~~a~~ 109 (166)
T 1a17_A 92 MALGKFRAALRDYETVVK 109 (166)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHhccHHHHHHHHHHHHH
Confidence 345666666666666654
No 189
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=26.75 E-value=55 Score=29.97 Aligned_cols=18 Identities=17% Similarity=0.207 Sum_probs=10.3
Q ss_pred HHHHHHHhccCcEEEEEe
Q psy1410 170 KQLQESLRKMKITLNINY 187 (246)
Q Consensus 170 ~~i~~sl~~~gi~l~~~~ 187 (246)
.++..-+.+.++.+-+..
T Consensus 272 ~~l~~~i~~~~~Div~~~ 289 (568)
T 2vsy_A 272 LATAKHIRHHGIDLLFDL 289 (568)
T ss_dssp HHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHhCCCCEEEEC
Confidence 445566666666665543
No 190
>4g84_A Histidine--tRNA ligase, cytoplasmic; synthetase; 2.40A {Homo sapiens}
Probab=26.71 E-value=25 Score=32.27 Aligned_cols=36 Identities=31% Similarity=0.409 Sum_probs=25.9
Q ss_pred HHHHHHHHHHHHhccCcEEEEEecCCccceEEEecCCeEEEeCCccccccc
Q psy1410 165 QEENLKQLQESLRKMKITLNINYSNTLHDREIVLSNDWVIKIGRGLDIFCH 215 (246)
Q Consensus 165 q~~~l~~i~~sl~~~gi~l~~~~~~tiHDR~I~~dnGw~IkigRGLd~fq~ 215 (246)
-.+.|+.+.+.|...|+...+.|+.+ +.||||||-.
T Consensus 256 ~l~~l~~l~~~l~~~g~~~~i~~d~~---------------lvrgldYYtG 291 (464)
T 4g84_A 256 GLGDLKLLFEYLTLFGIDDKISFDLS---------------LARGLDYYTG 291 (464)
T ss_dssp HHHHHHHHHHHHHHTTCGGGEEEETT---------------CCCCTTTCSS
T ss_pred HHHHHHHHHhHHHhhCCCcceeeccc---------------ccCCCcCcCC
Confidence 45668888889999998655555543 4689998764
No 191
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=26.60 E-value=1.5e+02 Score=32.70 Aligned_cols=20 Identities=20% Similarity=0.142 Sum_probs=16.0
Q ss_pred HHHHHHHhcCCHHHHHHHHH
Q psy1410 13 IRAVELDERGRWTESLTFYQ 32 (246)
Q Consensus 13 ~rAVe~D~~g~y~EAl~lY~ 32 (246)
+-|....+.|+|+||+.+|.
T Consensus 1110 qLAKAql~~G~~kEAIdsYi 1129 (1630)
T 1xi4_A 1110 QLAKAQLQKGMVKEAIDSYI 1129 (1630)
T ss_pred HHHHHHHhCCCHHHHHHHHH
Confidence 55677888889999988884
No 192
>2ln3_A De novo designed protein OR135; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=26.43 E-value=64 Score=23.20 Aligned_cols=25 Identities=16% Similarity=0.368 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHhccCcEEEEEecCC
Q psy1410 166 EENLKQLQESLRKMKITLNINYSNT 190 (246)
Q Consensus 166 ~~~l~~i~~sl~~~gi~l~~~~~~t 190 (246)
.+.|-+|.--.-+.|..|+++|++|
T Consensus 12 keelleialkfisqgldlevefdst 36 (83)
T 2ln3_A 12 KEELLEIALKFISQGLDLEVEFDST 36 (83)
T ss_dssp HHHHHHHHHHHHHHTCEEEEEECCC
T ss_pred HHHHHHHHHHHHhcCCceEEEecCC
Confidence 4557778878888999999999986
No 193
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=26.19 E-value=28 Score=31.93 Aligned_cols=14 Identities=14% Similarity=0.292 Sum_probs=6.6
Q ss_pred HHHHHHHHHHHHHh
Q psy1410 7 LAQFLLIRAVELDE 20 (246)
Q Consensus 7 kAi~ll~rAVe~D~ 20 (246)
.|++..++|++.+.
T Consensus 41 ~A~~~~~~al~~~p 54 (568)
T 2vsy_A 41 AGEMAVQRGLALHP 54 (568)
T ss_dssp HHHHHHHHHHTTST
T ss_pred HHHHHHHHHHHhCC
Confidence 44444444444443
No 194
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=26.02 E-value=64 Score=27.11 Aligned_cols=14 Identities=29% Similarity=0.304 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELD 19 (246)
Q Consensus 6 ~kAi~ll~rAVe~D 19 (246)
+.|...+++|++.+
T Consensus 147 ~~A~~~l~~~~~~~ 160 (291)
T 3mkr_A 147 DLARKELKKMQDQD 160 (291)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhC
Confidence 45555555555544
No 195
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=26.02 E-value=68 Score=25.14 Aligned_cols=15 Identities=7% Similarity=-0.172 Sum_probs=10.4
Q ss_pred HHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELD 19 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D 19 (246)
.+.|+....+|++.+
T Consensus 19 ~~~A~~~~~~~l~~~ 33 (272)
T 3u4t_A 19 YAEAIEVFNKLEAKK 33 (272)
T ss_dssp HHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHhC
Confidence 456777777777766
No 196
>3qky_A Outer membrane assembly lipoprotein YFIO; membrane protein; 2.15A {Rhodothermus marinus}
Probab=25.96 E-value=60 Score=25.92 Aligned_cols=29 Identities=21% Similarity=0.454 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
+-.+...|..+-+.|+|++|+.+|.++++
T Consensus 15 ~~~~~~~a~~~~~~g~~~~A~~~~~~~l~ 43 (261)
T 3qky_A 15 PQEAFERAMEFYNQGKYDRAIEYFKAVFT 43 (261)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHH
No 197
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=25.87 E-value=36 Score=25.76 Aligned_cols=26 Identities=27% Similarity=0.311 Sum_probs=20.5
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
++..|..+-..|++++|+.+|.++++
T Consensus 9 ~~~~a~~~~~~g~~~~A~~~~~~al~ 34 (176)
T 2r5s_A 9 LLKQVSELLQQGEHAQALNVIQTLSD 34 (176)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTSCH
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 56677777788888888888888775
No 198
>2fo7_A Synthetic consensus TPR protein; tetratricopeptide repeat, consensus protein, superhelix, de novo protein; 2.30A {Synthetic} SCOP: k.38.1.1 PDB: 2hyz_A
Probab=25.73 E-value=74 Score=21.18 Aligned_cols=25 Identities=16% Similarity=0.392 Sum_probs=18.6
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 12 LIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 12 l~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
...|..+-..|++++|+.+|.++++
T Consensus 5 ~~l~~~~~~~~~~~~A~~~~~~~~~ 29 (136)
T 2fo7_A 5 YNLGNAYYKQGDYDEAIEYYQKALE 29 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcHHHHHHHHHHHHH
Confidence 3445566677888888888888775
No 199
>3r2k_A Bacterioferritin, BFR; bacterial ferritin, iron binding, iron storage, iron homeost iron release, iron mobilization; 1.55A {Pseudomonas aeruginosa} SCOP: a.25.1.0 PDB: 3r2h_A 3r2l_A 3r2m_A 3r2o_A 3r2r_A 3r2s_A
Probab=25.64 E-value=2.2e+02 Score=21.50 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=39.7
Q ss_pred HHHHHHHHHHHHHHHHHhh---cCCChhHHHHHHHHHHH-HHHHHHHHHHhhhhhhhcc
Q psy1410 25 TESLTFYQDGVTELLKHVR---GLSNKGDQQKIRDKIET-YINRAEVLKGKLDEKKKMG 79 (246)
Q Consensus 25 ~EAl~lY~eaIe~Ll~~lk---~e~d~~kK~~lr~Ki~e-Ym~RAE~LK~~l~~~k~~g 79 (246)
+.|+..+..+++.+..+++ .+.|+...+.+..-+.+ ....+.-+..++..-+..|
T Consensus 87 ~~~l~~E~~~~~~~~~~~~~a~~~~D~~t~~~l~~~~~e~ee~h~~~l~~~l~~i~~~g 145 (154)
T 3r2k_A 87 EADLKLERHVRAALAKGIALCEQHKDFVSRDILKAQLADTEEDHAYWLEQQLGLIARMG 145 (154)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Confidence 4455555555554444443 45899999999999999 8888888888887655555
No 200
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=25.50 E-value=2e+02 Score=24.38 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.+..+...|..+-+.|+|++|+.+|.++++
T Consensus 25 ~~~~~~~~~~~~~~~g~~~~A~~~~~~~l~ 54 (450)
T 2y4t_A 25 DVEKHLELGKKLLAAGQLADALSQFHAAVD 54 (450)
T ss_dssp HHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHCCCHHHHHHHHHHHHH
Confidence 344555666666777777777777777664
No 201
>2hsb_A Hypothetical UPF0332 protein AF0298; DUF103 family, structural genomics, joint center for structu genomics, JCSG; HET: MSE PG4; 1.95A {Archaeoglobus fulgidus}
Probab=25.13 E-value=1.8e+02 Score=21.44 Aligned_cols=39 Identities=18% Similarity=0.044 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHh
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHV 42 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~l 42 (246)
.+++|-+.+..|-.+=+.|.|.-|......|+++.++++
T Consensus 8 ~l~~A~~~L~~A~~~~~~g~y~~a~~~ay~a~~~alKAl 46 (126)
T 2hsb_A 8 RIRKAEKLVQDAKKEFEMGLYERCCSTAYYAMFHAAKAM 46 (126)
T ss_dssp HHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Confidence 568999999999999999999999888888887776664
No 202
>1w3b_A UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110; OGT, glcnac, nucleoporin, O-linked glycosylation, TPR repeat, protein binding; 2.85A {Homo sapiens} SCOP: a.118.8.1
Probab=25.02 E-value=66 Score=27.11 Aligned_cols=16 Identities=25% Similarity=0.437 Sum_probs=8.8
Q ss_pred cCCHHHHHHHHHHHHH
Q psy1410 21 RGRWTESLTFYQDGVT 36 (246)
Q Consensus 21 ~g~y~EAl~lY~eaIe 36 (246)
.|++++|+.+|.++++
T Consensus 148 ~g~~~~A~~~~~~al~ 163 (388)
T 1w3b_A 148 LGRLEEAKACYLKAIE 163 (388)
T ss_dssp TSCHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHH
Confidence 3556666655555543
No 203
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=24.98 E-value=1e+02 Score=26.10 Aligned_cols=22 Identities=5% Similarity=0.215 Sum_probs=15.9
Q ss_pred HHhcCCHHHHHHHHHHHHHHHH
Q psy1410 18 LDERGRWTESLTFYQDGVTELL 39 (246)
Q Consensus 18 ~D~~g~y~EAl~lY~eaIe~Ll 39 (246)
+-..|+|++|+.+|.+|+++.-
T Consensus 194 ~~~~g~~~~A~~~~~~al~~~~ 215 (383)
T 3ulq_A 194 FLDLKQYEDAISHFQKAYSMAE 215 (383)
T ss_dssp HHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCHHHHHHHHHHHHHHHH
Confidence 3445888888888888887543
No 204
>4g85_A Histidine-tRNA ligase, cytoplasmic; synthetase; 3.11A {Homo sapiens}
Probab=24.81 E-value=27 Score=33.00 Aligned_cols=34 Identities=32% Similarity=0.471 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhccCcEEEEEecCCccceEEEecCCeEEEeCCccccccc
Q psy1410 167 ENLKQLQESLRKMKITLNINYSNTLHDREIVLSNDWVIKIGRGLDIFCH 215 (246)
Q Consensus 167 ~~l~~i~~sl~~~gi~l~~~~~~tiHDR~I~~dnGw~IkigRGLd~fq~ 215 (246)
+.|..+.+.|...|+...+.|+.+ +.||||||-.
T Consensus 311 ~~l~~l~~~l~~~g~~~~i~~d~~---------------lvrgldYYtG 344 (517)
T 4g85_A 311 GDLKLLFEYLTLFGIDDKISFDLS---------------LARGLDYYTG 344 (517)
T ss_dssp HHHHHHHHHHHHHTCGGGEEECTT---------------CCCCTTTCSS
T ss_pred HHHHHHHHHHHhhCCCcceeeccc---------------cccCCcccCC
Confidence 346667777888888655555543 4699999863
No 205
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=24.70 E-value=77 Score=30.39 Aligned_cols=15 Identities=7% Similarity=0.368 Sum_probs=7.6
Q ss_pred cCCHHHHHHHHHHHH
Q psy1410 21 RGRWTESLTFYQDGV 35 (246)
Q Consensus 21 ~g~y~EAl~lY~eaI 35 (246)
.|+|++|+..|++|+
T Consensus 480 ~g~~~~A~~~~~~al 494 (681)
T 2pzi_A 480 TGDYDSATKHFTEVL 494 (681)
T ss_dssp HTCHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHH
Confidence 445555555555544
No 206
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=24.54 E-value=45 Score=29.27 Aligned_cols=30 Identities=20% Similarity=0.277 Sum_probs=16.8
Q ss_pred HHHHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 7 LAQFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 7 kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.|-.+...|..+-+.|+|++|+.+|.++++
T Consensus 24 ~a~~~~~~g~~~~~~g~~~~A~~~~~~al~ 53 (537)
T 3fp2_A 24 YAVQLKNRGNHFFTAKNFNEAIKYYQYAIE 53 (537)
T ss_dssp HHHHHHHHHHHHHHTTCCC-CHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHHHHHh
Confidence 445555556666666666666666655554
No 207
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=24.43 E-value=3.5e+02 Score=23.48 Aligned_cols=51 Identities=10% Similarity=-0.011 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhc-C-CChhHHHHH
Q psy1410 4 SIELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRG-L-SNKGDQQKI 54 (246)
Q Consensus 4 ~~~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~-e-~d~~kK~~l 54 (246)
....|-.+..+|-+..++|+-..|-..|..|..++-.+--. . .||...+.+
T Consensus 65 w~~~a~~~~~~a~~~~~~g~~~~a~~~~~~A~~~~~~a~~~~~~~~~~~~~~~ 117 (405)
T 3fnb_A 65 FNEHADYLEDEVERVKKVGYRDLISHLYFSACFSIRAALQFTDPKDSEFMENF 117 (405)
T ss_dssp HHHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTCCTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHhhcCCCCCccHHHHH
Confidence 45578888899999999999999999999999888877332 2 344444443
No 208
>2vh1_A FTSQ, cell division protein FTSQ; potra, membrane, septation, cell cycle, transmembrane, inner membrane; 2.7A {Escherichia coli}
Probab=24.42 E-value=2.1e+02 Score=23.25 Aligned_cols=57 Identities=19% Similarity=0.339 Sum_probs=36.3
Q ss_pred EEEeecCCCCCCCccccchHHHHHHHHHHHHHHhccCcEE-EEEecCCccceEEEecCCeEEEeCCc
Q psy1410 144 INLLTTYADRPQHSNKTARVKQEENLKQLQESLRKMKITL-NINYSNTLHDREIVLSNDWVIKIGRG 209 (246)
Q Consensus 144 i~L~T~~d~~~~~~~~~~~~~q~~~l~~i~~sl~~~gi~l-~~~~~~tiHDR~I~~dnGw~IkigRG 209 (246)
+=++|+.+.. ...-.+.+.+|...+...+..+ .+.+++. ++=.++++||-.|.+|++
T Consensus 101 lP~l~G~~~~--------~~~~l~~~~~l~~~l~~~~~~i~~i~~~~~-~~~~l~l~~g~~V~lG~~ 158 (220)
T 2vh1_A 101 LPMLYGPEGS--------ANEVLQGYREMGQMLAKDRFTLKEAAMTAR-RSWQLTLNNDIKLNLGRG 158 (220)
T ss_dssp CCEEECSTTC--------HHHHHHHHHHHHHHHHTTTCCCCEEEECSS-SCEEEECSSSCEEEEESS
T ss_pred CcEEECCCCC--------HHHHHHHHHHHHHHHHhcCceEEEEEECCC-CcEEEEECCCCEEEECCc
Confidence 3455665542 2334466778888887665444 3445542 233688999999999996
No 209
>2r5s_A Uncharacterized protein VP0806; APC090868.1, vibrio parahaemolyticus RIMD 22 structural genomics, PSI-2, protein structure initiative; HET: MES; 2.14A {Vibrio parahaemolyticus}
Probab=24.06 E-value=68 Score=24.14 Aligned_cols=21 Identities=24% Similarity=0.327 Sum_probs=13.6
Q ss_pred HHHHhcCCHHHHHHHHHHHHH
Q psy1410 16 VELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 16 Ve~D~~g~y~EAl~lY~eaIe 36 (246)
.-+...|++++|+.+|.++++
T Consensus 116 ~~~~~~g~~~~A~~~~~~~l~ 136 (176)
T 2r5s_A 116 VQYNQVGRDEEALELLWNILK 136 (176)
T ss_dssp HHHHHTTCHHHHHHHHHHHHT
T ss_pred HHHHHcccHHHHHHHHHHHHH
Confidence 334457777777777776653
No 210
>3osx_A 60 kDa chaperonin; alpha, beta, apical domain, chaperone; 1.55A {Xenorhabdus nematophila} SCOP: c.8.5.1 PDB: 1kid_A 1fy9_A 1la1_A 1fya_A 1jon_A 1dk7_A 1dkd_A
Probab=24.04 E-value=29 Score=29.86 Aligned_cols=80 Identities=13% Similarity=0.268 Sum_probs=51.9
Q ss_pred CCCCccchHH-hHHHhhcc--cccEEEeeCCccc----chhHHhhHHHHHHHHHhcCCCcc-------------------
Q psy1410 89 NNEKGVTYEK-LFGRFLDE--NVEQIDVTDPYIH----NKHQCYNFLQFCELAIKNCKNVK------------------- 142 (246)
Q Consensus 89 en~~G~sYe~-lFg~yl~~--~~~~I~ieDPYIr----~~hQ~~N~~~f~E~~v~~~~~~~------------------- 142 (246)
.|+-|..||+ -..||+-. .-.++.++||||= ....++-++-++|.+++....+.
T Consensus 10 ~~~~~~qfDrGYiSPYfvtd~e~m~~~le~p~ILitdkKIs~i~~ilP~LE~v~~~~rpLlIIAEDvegEALatLvvNkl 89 (201)
T 3osx_A 10 HGSEGMQFDRGYLSPYFINKPESGSVELENPYILLVDKKISNIRELLPVLEGVAKASKPLVIIAEDVEGEALATLVVNNM 89 (201)
T ss_dssp --CCCEEESCCBSCGGGCSBTTTTBEEEESCEEEEEEEEECCHHHHHHHHHHHHTSSCCEEEEEEEECHHHHHHHHHHHH
T ss_pred cCccccEecCccCChheeecccCCEEEecCCeEEEEcCccCCHHHHHHHHHHHHHhCCCeEEEeccccchhhhHHHHhhc
Confidence 4555666553 35789843 2358999999994 35668889999999998854431
Q ss_pred --eEEEeecCCCCCCCccccchHHHHHHHHHHHHH
Q psy1410 143 --RINLLTTYADRPQHSNKTARVKQEENLKQLQES 175 (246)
Q Consensus 143 --~i~L~T~~d~~~~~~~~~~~~~q~~~l~~i~~s 175 (246)
.+..+-...++. ++..++.|+.|.--
T Consensus 90 rg~l~v~AVKAPgF-------GdrRk~~L~DIAil 117 (201)
T 3osx_A 90 RGIVKVASVKAPGF-------GDRRKAMLQDIATL 117 (201)
T ss_dssp HTSCCEEEEECSSC-------HHHHHHHHHHHHHH
T ss_pred cceEEEEEEeCCCC-------ccchhhhhHhHHHH
Confidence 122333334444 67888888888754
No 211
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=23.90 E-value=95 Score=25.75 Aligned_cols=26 Identities=12% Similarity=0.024 Sum_probs=19.1
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 12 LIRAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 12 l~rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
...|..+-..|+|++|+..|.+|+++
T Consensus 76 ~~lg~~~~~~g~~~~A~~~~~~al~l 101 (281)
T 2c2l_A 76 FFLGQCQLEMESYDEAIANLQRAYSL 101 (281)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 34455566788888888888888863
No 212
>3gvy_A Bacterioferritin; iron storage, DI-iron, ferroxida activity, heme, metal binding protein; HET: HEM; 2.80A {Rhodobacter sphaeroides} SCOP: a.25.1.1
Probab=23.68 E-value=2.4e+02 Score=21.38 Aligned_cols=55 Identities=13% Similarity=0.142 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHh---hcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhhhhcc
Q psy1410 25 TESLTFYQDGVTELLKHV---RGLSNKGDQQKIRDKIETYINRAEVLKGKLDEKKKMG 79 (246)
Q Consensus 25 ~EAl~lY~eaIe~Ll~~l---k~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~k~~g 79 (246)
+.|+..+..+++.+..++ ..+.|+..++.+..-+.+.-..+.-|.+.+..-+..|
T Consensus 88 ~~~l~~E~~~~~~~~~~~~~A~~~~D~~t~~~l~~~~~eEe~h~~~l~~~l~~i~~~g 145 (161)
T 3gvy_A 88 DADLAAEHDARTLYIEARDHCEKVRDYPSKMLFEELIADEEGHIDYLETQIDLMGSIG 145 (161)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTTCHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 345555555555555543 3468999999999999999999999999887766665
No 213
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3
Probab=23.44 E-value=1.9e+02 Score=26.41 Aligned_cols=33 Identities=30% Similarity=0.299 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHHHH---------------hcCCHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELD---------------ERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D---------------~~g~y~EAl~lY~eaIe~ 37 (246)
.+.|++...+|++++ ..|+|++|+.+|++|++.
T Consensus 56 ~~~A~~~~~~al~l~p~~~~~~~~lg~~~~~~g~~~eA~~~~~~al~~ 103 (477)
T 1wao_1 56 YGYALGDATRAIELDKKYIKGYYRRAASNMALGKFRAALRDYETVVKV 103 (477)
T ss_dssp HHHHHHHHHHHHHSCTTCHHHHHHHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHh
Confidence 356777777776665 467888888888888763
No 214
>2ond_A Cleavage stimulation factor 77 kDa subunit; HAT domain, structural protein; 2.80A {Mus musculus} SCOP: a.118.8.7
Probab=23.28 E-value=1.1e+02 Score=25.31 Aligned_cols=32 Identities=6% Similarity=-0.009 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHH---------------hcCCHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELD---------------ERGRWTESLTFYQDGVT 36 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D---------------~~g~y~EAl~lY~eaIe 36 (246)
.+.|..+..+|++.+ +.|++++|..+|..|+.
T Consensus 185 ~~~A~~~~~~al~~~p~~~~~~~~~~~~~~~~g~~~~A~~~~~~al~ 231 (308)
T 2ond_A 185 KSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLT 231 (308)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 456777777777655 35888888888888875
No 215
>3qou_A Protein YBBN; thioredoxin-like fold, tetratricopeptide repeat, lysine dimethylation, protein binding; HET: MLY; 1.80A {Escherichia coli} PDB: 3qdn_A*
Probab=23.23 E-value=1.1e+02 Score=25.47 Aligned_cols=28 Identities=18% Similarity=0.362 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 9 QFLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 9 i~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
-.++..|..+-..|++++|+..|+++++
T Consensus 118 ~~~~~~a~~~~~~g~~~~A~~~~~~al~ 145 (287)
T 3qou_A 118 ELXAQQAMQLMQESNYTDALPLLXDAWQ 145 (287)
T ss_dssp HHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence 3456778888889999999999998875
No 216
>3mkr_A Coatomer subunit epsilon; tetratricopeptide repeats (TPR), beta-hairpin, alpha-solenoi transport protein; 2.60A {Bos taurus}
Probab=22.78 E-value=1e+02 Score=25.84 Aligned_cols=22 Identities=23% Similarity=0.403 Sum_probs=13.4
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH
Q psy1410 15 AVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 15 AVe~D~~g~y~EAl~lY~eaIe 36 (246)
|+-+.+.|++++|..+|.++++
T Consensus 207 a~~~~~~g~~~eA~~~l~~al~ 228 (291)
T 3mkr_A 207 AACHMAQGRWEAAEGVLQEALD 228 (291)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHH
Confidence 3344556666777666666664
No 217
>3ieg_A DNAJ homolog subfamily C member 3; TPR motif, chaperone, endoplasmic reticulum, TPR repeat, UNF protein response; 2.51A {Mus musculus}
Probab=22.75 E-value=1.5e+02 Score=23.76 Aligned_cols=24 Identities=4% Similarity=0.011 Sum_probs=16.8
Q ss_pred HHHHHHhcCCHHHHHHHHHHHHHH
Q psy1410 14 RAVELDERGRWTESLTFYQDGVTE 37 (246)
Q Consensus 14 rAVe~D~~g~y~EAl~lY~eaIe~ 37 (246)
.|.-+-..|++++|+.+|.++++.
T Consensus 278 la~~~~~~~~~~~A~~~~~~~~~~ 301 (359)
T 3ieg_A 278 ICHCFSKDEKPVEAIRICSEVLQM 301 (359)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCHHHHHHHHHHHHHh
Confidence 344556678888888888877763
No 218
>3q15_A PSP28, response regulator aspartate phosphatase H; tetratricopeptide repeat, 3-helix bundle, phosphorelay signa transduction, phosphatase; 2.19A {Bacillus subtilis}
Probab=22.73 E-value=1.2e+02 Score=25.75 Aligned_cols=26 Identities=12% Similarity=0.187 Sum_probs=18.6
Q ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHH
Q psy1410 13 IRAVELDERGRWTESLTFYQDGVTEL 38 (246)
Q Consensus 13 ~rAVe~D~~g~y~EAl~lY~eaIe~L 38 (246)
.-|.-+-..|+|++|+.+|.+|+++.
T Consensus 187 ~lg~~y~~~~~~~~A~~~~~~al~~~ 212 (378)
T 3q15_A 187 VIAGNYDDFKHYDKALPHLEAALELA 212 (378)
T ss_dssp HHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 34444556788888888888888755
No 219
>3nf1_A KLC 1, kinesin light chain 1; TPR, structural genomics consortium (SGC), motor PR transport protein; 2.80A {Homo sapiens}
Probab=22.73 E-value=2.8e+02 Score=21.70 Aligned_cols=31 Identities=19% Similarity=0.263 Sum_probs=23.3
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVTELLKH 41 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~ 41 (246)
+...|.-+-..|++++|+.+|.++++.+...
T Consensus 156 ~~~la~~~~~~~~~~~A~~~~~~a~~~~~~~ 186 (311)
T 3nf1_A 156 LNNLALLCQNQGKYEEVEYYYQRALEIYQTK 186 (311)
T ss_dssp HHHHHHHHHTTTCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHcCCHHHHHHHHHHHHHHHHHH
Confidence 3444555667899999999999999875543
No 220
>3q49_B STIP1 homology and U box-containing protein 1; E3 ubiquitin ligase, ligase-chaperone complex; 1.54A {Mus musculus} PDB: 3q47_B 3q4a_B*
Probab=22.50 E-value=1.9e+02 Score=19.81 Aligned_cols=17 Identities=18% Similarity=0.263 Sum_probs=10.2
Q ss_pred hcCCHHHHHHHHHHHHH
Q psy1410 20 ERGRWTESLTFYQDGVT 36 (246)
Q Consensus 20 ~~g~y~EAl~lY~eaIe 36 (246)
..|++++|+..|.++++
T Consensus 89 ~~~~~~~A~~~~~~a~~ 105 (137)
T 3q49_B 89 EMESYDEAIANLQRAYS 105 (137)
T ss_dssp HTTCHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHH
Confidence 35666666666666655
No 221
>3sf4_A G-protein-signaling modulator 2; tetratricopeptide repeat, TPR, cell polarity, asymmetric CEL division, mitotic spindle orientation; 2.60A {Homo sapiens}
Probab=22.20 E-value=1.4e+02 Score=24.63 Aligned_cols=27 Identities=0% Similarity=-0.053 Sum_probs=13.2
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 10 FLLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 10 ~ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
.+...|.-+-..|++++|+.+|.+|++
T Consensus 269 ~~~~la~~~~~~g~~~~A~~~~~~a~~ 295 (406)
T 3sf4_A 269 SCYSLGNTYTLLQDYEKAIDYHLKHLA 295 (406)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 333444444455555555555555543
No 222
>3u4t_A TPR repeat-containing protein; structural genomics, PSI- protein structure initiative, northeast structural genomics consortium, NESG; 2.28A {Cytophaga hutchinsonii}
Probab=22.09 E-value=1.2e+02 Score=23.69 Aligned_cols=22 Identities=23% Similarity=0.275 Sum_probs=12.2
Q ss_pred HHHHHhcCCHHHHHHHHHHHHH
Q psy1410 15 AVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 15 AVe~D~~g~y~EAl~lY~eaIe 36 (246)
|.-+-..|++++|+.+|.++++
T Consensus 81 g~~~~~~~~~~~A~~~~~~a~~ 102 (272)
T 3u4t_A 81 GKILMKKGQDSLAIQQYQAAVD 102 (272)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHcccHHHHHHHHHHHHh
Confidence 3334445666666666666554
No 223
>3bee_A Putative YFRE protein; putaive YFRE protein, structural GE PSI-2, protein structure initiative; 2.15A {Vibrio parahaemolyticus rimd 2210633}
Probab=21.92 E-value=1.1e+02 Score=21.72 Aligned_cols=12 Identities=8% Similarity=0.075 Sum_probs=10.0
Q ss_pred HHHHHHHHHHHH
Q psy1410 24 WTESLTFYQDGV 35 (246)
Q Consensus 24 y~EAl~lY~eaI 35 (246)
..+|..++++|+
T Consensus 25 ~~~A~~~l~~AL 36 (93)
T 3bee_A 25 TDEVSLLLEQAL 36 (93)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 688888888887
No 224
>3as5_A MAMA; tetratricopeptide repeats (TPR) containing protein, TPR PROT protein-protein interactions, protein binding; 2.00A {Magnetospirillum magnetotacticum} PDB: 3as4_A 3asd_A 3asg_A 3ash_A 3as8_A 3asf_A
Probab=21.77 E-value=1.4e+02 Score=21.21 Aligned_cols=18 Identities=22% Similarity=0.501 Sum_probs=10.3
Q ss_pred HhcCCHHHHHHHHHHHHH
Q psy1410 19 DERGRWTESLTFYQDGVT 36 (246)
Q Consensus 19 D~~g~y~EAl~lY~eaIe 36 (246)
-..|++++|+.+|.++++
T Consensus 121 ~~~~~~~~A~~~~~~~~~ 138 (186)
T 3as5_A 121 DNLGRFDEAIDSFKIALG 138 (186)
T ss_dssp HHTTCHHHHHHHHHHHHH
T ss_pred HHcCcHHHHHHHHHHHHh
Confidence 345566666666666554
No 225
>1zu2_A Mitochondrial import receptor subunit TOM20-3; TPR, tetratricopeptide repeat like, TPR-like, transport protein; NMR {Arabidopsis thaliana} SCOP: a.118.8.1
Probab=21.57 E-value=82 Score=25.44 Aligned_cols=37 Identities=16% Similarity=0.185 Sum_probs=21.7
Q ss_pred HHHHHHHHHHHHHHHh-cCCHHHHHHHHHHHHHHHHHH
Q psy1410 5 IELAQFLLIRAVELDE-RGRWTESLTFYQDGVTELLKH 41 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~-~g~y~EAl~lY~eaIe~Ll~~ 41 (246)
.++|+...++|+++|. .+.|..|+.+..+|-++...+
T Consensus 107 ~~eA~~~~~kAl~l~P~~~~y~~al~~~~ka~el~~~~ 144 (158)
T 1zu2_A 107 FDLATQFFQQAVDEQPDNTHYLKSLEMTAKAPQLHAEA 144 (158)
T ss_dssp HHHHHHHHHHHHHHCTTCHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCHHHHHHHHHHHhCHhccCcc
Confidence 4567777777777773 445555555555555544443
No 226
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=21.51 E-value=1.1e+02 Score=27.68 Aligned_cols=26 Identities=12% Similarity=0.109 Sum_probs=16.9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHH
Q psy1410 11 LLIRAVELDERGRWTESLTFYQDGVT 36 (246)
Q Consensus 11 ll~rAVe~D~~g~y~EAl~lY~eaIe 36 (246)
+...|.-+-+.|+|++|+.+|.+||+
T Consensus 320 ~~nla~~~~~~g~~~~A~~~~~~al~ 345 (457)
T 1kt0_A 320 FLNLAMCYLKLREYTKAVECCDKALG 345 (457)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 33445555566777777777777765
No 227
>4eqf_A PEX5-related protein; accessory protein, tetratricopeptide repeat, TPR; 3.00A {Mus musculus}
Probab=21.50 E-value=86 Score=26.05 Aligned_cols=31 Identities=10% Similarity=0.088 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHh---------------cCCHHHHHHHHHHHHH
Q psy1410 6 ELAQFLLIRAVELDE---------------RGRWTESLTFYQDGVT 36 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~---------------~g~y~EAl~lY~eaIe 36 (246)
+.|+++..+|++.+. .|++++|+.+|.++++
T Consensus 82 ~~A~~~~~~al~~~p~~~~~~~~lg~~~~~~g~~~~A~~~~~~al~ 127 (365)
T 4eqf_A 82 PVTILFMEAAILQDPGDAEAWQFLGITQAENENEQAAIVALQRCLE 127 (365)
T ss_dssp HHHHHHHHHHHHHCTTCHHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHh
Confidence 456666666655443 4556666666665554
No 228
>2vh2_A FTSQ, cell division protein FTSQ; potra, cell cycle; 3.4A {Yersinia enterocolitica}
Probab=21.26 E-value=1.6e+02 Score=24.94 Aligned_cols=46 Identities=24% Similarity=0.367 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHHHHhccCcEE-EEEecCCccceEEEecCCeEEEeCCc
Q psy1410 163 VKQEENLKQLQESLRKMKITL-NINYSNTLHDREIVLSNDWVIKIGRG 209 (246)
Q Consensus 163 ~~q~~~l~~i~~sl~~~gi~l-~~~~~~tiHDR~I~~dnGw~IkigRG 209 (246)
.+-...+.+|...|...+..+ .+.+++. .+=.++++||-.|.+|++
T Consensus 138 ~~~l~~l~~l~~~l~~~~~~I~~I~~~~~-~~~~l~l~~g~~V~lG~~ 184 (255)
T 2vh2_A 138 QDVLEGYRAINKVLAANKYQLKMVAMSAR-HSWQLALDNDVRLELGRD 184 (255)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEECCTT-CCEEEECSSSCCCEEESS
T ss_pred HHHHHHHHHHHHHHHhcCCeEEEEEECCC-CeEEEEECCCCEEEECCC
Confidence 344567788888886544433 3556653 334788999999999996
No 229
>3cv0_A Peroxisome targeting signal 1 receptor PEX5; TPR motifs, TPR protein, peroxin 5, PEX5, PTS1 binding domain, protein-peptide complex, receptor; 2.00A {Trypanosoma brucei} PDB: 3cvl_A 3cvn_A 3cvp_A 3cvq_A
Probab=21.24 E-value=1e+02 Score=24.57 Aligned_cols=24 Identities=4% Similarity=0.066 Sum_probs=12.0
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHHH
Q psy1410 12 LIRAVELDERGRWTESLTFYQDGV 35 (246)
Q Consensus 12 l~rAVe~D~~g~y~EAl~lY~eaI 35 (246)
..+|..+-..|++++|+.+|.+++
T Consensus 25 ~~~a~~~~~~~~~~~A~~~~~~~~ 48 (327)
T 3cv0_A 25 MEEGLSMLKLANLAEAALAFEAVC 48 (327)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccHHHHHHHHHHHH
Confidence 344444445555555555555544
No 230
>3ulq_A Response regulator aspartate phosphatase F; tetratricopeptide repeat, response regulator helix-turn-HELX binding, 3-helix bundle; 2.30A {Bacillus subtilis}
Probab=21.24 E-value=1.6e+02 Score=24.90 Aligned_cols=32 Identities=9% Similarity=-0.004 Sum_probs=22.6
Q ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHH
Q psy1410 8 AQFLLIRAVELDERGRWTESLTFYQDGVTELL 39 (246)
Q Consensus 8 Ai~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll 39 (246)
|..+...|.-.-..|++++|+.+|.+|++++-
T Consensus 143 a~~~~~lg~~~~~~~~~~~A~~~~~~al~~~~ 174 (383)
T 3ulq_A 143 AEFFFKMSESYYYMKQTYFSMDYARQAYEIYK 174 (383)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH
Confidence 33444455555667899999999999988654
No 231
>3k6c_A Uncharacterized protein NE0167; structural genomics, MCSG, unknown function protein, PSI, PR structure initiative; 2.20A {Nitrosomonas europaea}
Probab=20.68 E-value=2.5e+02 Score=21.24 Aligned_cols=43 Identities=14% Similarity=0.180 Sum_probs=33.0
Q ss_pred HHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy1410 25 TESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLDE 74 (246)
Q Consensus 25 ~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~ 74 (246)
-+|+.+|.+-+ ...+|+..|..+..-..+=...|..+-.+|..
T Consensus 31 leAI~~Y~q~a-------~~~~d~~~k~vl~~i~~EEkeH~g~~lelLrr 73 (95)
T 3k6c_A 31 LEAVDLYNQRV-------NACKDKELKAILAHNRDEEKEHAAMLLEWIRR 73 (95)
T ss_dssp HHHHHHHHHHH-------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-------HhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46777776643 35789999999999888888888888777754
No 232
>3fp2_A TPR repeat-containing protein YHR117W; TOM71, mitochondria translocation, allosteric REG phosphoprotein, TPR repeat, ATP-binding; 1.98A {Saccharomyces cerevisiae} PDB: 3fp3_A 3fp4_A 3lca_A
Probab=20.20 E-value=81 Score=27.55 Aligned_cols=16 Identities=25% Similarity=0.069 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHHh
Q psy1410 5 IELAQFLLIRAVELDE 20 (246)
Q Consensus 5 ~~kAi~ll~rAVe~D~ 20 (246)
.+.|+....+|++.+.
T Consensus 394 ~~~A~~~~~~a~~~~~ 409 (537)
T 3fp2_A 394 FDTAIKQYDIAKRLEE 409 (537)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCC
Confidence 4577888888877764
No 233
>4etr_A Putative uncharacterized protein; DUF2383, domain of unknown function, cytoplasmic, unknown FU; 2.25A {Pseudomonas aeruginosa}
Probab=20.17 E-value=3.1e+02 Score=21.30 Aligned_cols=58 Identities=9% Similarity=0.035 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHhhcCCChhHHHHHHHHHHHHHHHHHHHHHhhhhh
Q psy1410 6 ELAQFLLIRAVELDERGRWTESLTFYQDGVTELLKHVRGLSNKGDQQKIRDKIETYINRAEVLKGKLDEK 75 (246)
Q Consensus 6 ~kAi~ll~rAVe~D~~g~y~EAl~lY~eaIe~Ll~~lk~e~d~~kK~~lr~Ki~eYm~RAE~LK~~l~~~ 75 (246)
+..++.+...++... .|..-|..|+ ..-.||..|..|...+.+.-..|.+|...+...
T Consensus 10 ~~~i~~Ln~Li~~~~-----D~~~gY~~aa-------e~~~d~~lk~~f~~~a~~~~~~~~eL~~~i~~l 67 (153)
T 4etr_A 10 DDTLDVLNDLLQTSK-----DGEAGFHACA-------EDLRDPQLKAAMLEQSRDCAAAADELERIVLEL 67 (153)
T ss_dssp HHHHHHHHHHHHHHH-----HHHHHHHHHH-------HTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHhh-----HHHHHHHHHH-------HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455666666665553 3444555544 455799999999999999999999999999753
No 234
>3lc0_A Histidyl-tRNA synthetase; tRNA-ligase, aminoacyl-tRNA synthetase, ligase, structural G medical structural genomics of pathogenic protozoa; HET: HIS; 1.80A {Trypanosoma cruzi} PDB: 3hrk_A* 3hri_A
Probab=20.02 E-value=36 Score=31.94 Aligned_cols=35 Identities=17% Similarity=0.269 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHhccCcEEEEEecCCccceEEEecCCeEEEeCCccccccc
Q psy1410 166 EENLKQLQESLRKMKITLNINYSNTLHDREIVLSNDWVIKIGRGLDIFCH 215 (246)
Q Consensus 166 ~~~l~~i~~sl~~~gi~l~~~~~~tiHDR~I~~dnGw~IkigRGLd~fq~ 215 (246)
.+.|.+|-+.|...||.-.+.||.+ +-||||||-.
T Consensus 265 ~~~L~~l~~~l~~~gi~~~~~~D~~---------------lvRgldYYTG 299 (456)
T 3lc0_A 265 VKELRQFFEQVEAYGYGDWVLFDAS---------------VVRGLAYYTG 299 (456)
T ss_dssp HHHHHHHHHHHHHHTCGGGEEECTT---------------CCCSCTTCCS
T ss_pred HHHHHHHHHHHHHcCCCceEEEecC---------------ccCCccccCC
Confidence 6667777788888898633445543 4688888864
Done!