BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14100
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VAC5|ADA17_DROME ADAM 17-like protease OS=Drosophila melanogaster GN=Tace PE=2 SV=2
Length = 732
Score = 105 bits (262), Expect = 7e-23, Method: Composition-based stats.
Identities = 55/101 (54%), Positives = 68/101 (67%), Gaps = 11/101 (10%)
Query: 24 GTCEKTIQDVVERFWDIIEEININKVLLFLRDNVVGTVVVVSAALWIPASCLISYIDRAR 83
G CEKTIQDVVERFWDIIEEIN+ K L FL+DN+V VV+V+A WIP SC+ISY DR +
Sbjct: 630 GVCEKTIQDVVERFWDIIEEINVAKTLRFLKDNIVMAVVLVTAVFWIPISCVISYFDRKK 689
Query: 84 LRAAYNEHRKR----NAHLEPMFNPEALRPRRIIKTRVTRQ 120
LR H + + L+ + +P R RR+I RV RQ
Sbjct: 690 LR-----HEMKLIEWSQKLD-LIHPSDER-RRVIHIRVPRQ 723
>sp|Q9Z1K9|ADA17_RAT Disintegrin and metalloproteinase domain-containing protein 17
OS=Rattus norvegicus GN=Adam17 PE=2 SV=1
Length = 827
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 23 SGTCEKTIQDVVERFWDIIEEININKVLLFLRDNVVGTVVVVSAALWIPASCLISYIDR 81
+G CEK +QDV+ERFWD I++++IN FL DN+VG+V+V S WIP S L+ +D+
Sbjct: 638 NGKCEKRVQDVIERFWDFIDQLSINTFGKFLADNIVGSVLVFSLIFWIPFSILVHCVDK 696
>sp|Q9Z0F8|ADA17_MOUSE Disintegrin and metalloproteinase domain-containing protein 17
OS=Mus musculus GN=Adam17 PE=1 SV=3
Length = 827
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 23 SGTCEKTIQDVVERFWDIIEEININKVLLFLRDNVVGTVVVVSAALWIPASCLISYIDR 81
+G CEK +QDV+ERFWD I++++IN FL DN+VG+V+V S WIP S L+ +D+
Sbjct: 638 NGKCEKRVQDVIERFWDFIDQLSINTFGKFLADNIVGSVLVFSLIFWIPFSILVHCVDK 696
>sp|P78536|ADA17_HUMAN Disintegrin and metalloproteinase domain-containing protein 17
OS=Homo sapiens GN=ADAM17 PE=1 SV=1
Length = 824
Score = 73.9 bits (180), Expect = 3e-13, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 43/59 (72%)
Query: 23 SGTCEKTIQDVVERFWDIIEEININKVLLFLRDNVVGTVVVVSAALWIPASCLISYIDR 81
+G CEK +QDV+ERFWD I++++IN FL DN+VG+V+V S WIP S L+ +D+
Sbjct: 638 NGKCEKRVQDVIERFWDFIDQLSINTFGKFLADNIVGSVLVFSLIFWIPFSILVHCVDK 696
>sp|P08956|T1RK_ECOLI Type I restriction enzyme EcoKI R protein OS=Escherichia coli
(strain K12) GN=hsdR PE=3 SV=3
Length = 1170
Score = 32.7 bits (73), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 48/101 (47%), Gaps = 16/101 (15%)
Query: 12 FYQMEHP-VYKASGTCEKT---IQDVVERFWDIIEEININKVLLFLRDNVVGTVVVVSAA 67
+ Q+EH + K +G +K +Q ++ RF NK L N+V TV +++
Sbjct: 752 YPQLEHDAIIKITGDADKDARKVQTMITRF---------NKERL---PNIVVTVDLLTTG 799
Query: 68 LWIPASCLISYIDRARLRAAYNEHRKRNAHLEPMFNPEALR 108
+ IP+ C I ++ + R R Y + + R L P N + +
Sbjct: 800 VDIPSICNIVFLRKVRSRILYEQMKGRATRLCPEVNKTSFK 840
>sp|A4W9T2|MDTK_ENT38 Multidrug resistance protein MdtK OS=Enterobacter sp. (strain 638)
GN=mdtK PE=3 SV=1
Length = 457
Score = 30.8 bits (68), Expect = 2.8, Method: Composition-based stats.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 17/99 (17%)
Query: 5 LLWTL--LIFYQMEHPVYKASGTCE---KTIQDVVERFWDIIEEININKVLLFLRDNV-- 57
LLW +F+Q+ A CE KT +V F ++ I +N + ++ +
Sbjct: 134 LLWGAPGYLFFQV------ARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPE 187
Query: 58 ---VGTVVVVSAALWIPASCLISYIDRAR-LRAAYNEHR 92
VG V +A W+ +ISY+ RAR +R NE R
Sbjct: 188 LGGVGCGVATAAVYWVMFFSMISYVKRARSMRDIRNEQR 226
>sp|Q7UAH8|MDTK_SHIFL Multidrug resistance protein MdtK OS=Shigella flexneri GN=mdtK PE=3
SV=1
Length = 457
Score = 29.3 bits (64), Expect = 7.6, Method: Composition-based stats.
Identities = 32/107 (29%), Positives = 48/107 (44%), Gaps = 19/107 (17%)
Query: 5 LLWTL--LIFYQMEHPVYKASGTCE---KTIQDVVERFWDIIEEININKVLLFLRDNV-- 57
LLW +F+Q+ A CE KT +V F ++ I +N + ++ +
Sbjct: 134 LLWGAPGYLFFQV------ARNQCEGLAKTKPGMVMGFIGLLVNIPVNYIFIYGHFGMPE 187
Query: 58 ---VGTVVVVSAALWIPASCLISYIDRAR-LRAAYNEHRKRNAHLEP 100
VG V +A W+ ++SYI RAR +R NE K A EP
Sbjct: 188 LGGVGCGVATAAVYWVMFLAMVSYIKRARSMRDIRNE--KGTAKPEP 232
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.136 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,063,551
Number of Sequences: 539616
Number of extensions: 1611897
Number of successful extensions: 4880
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 4872
Number of HSP's gapped (non-prelim): 36
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)