Query psy14104
Match_columns 319
No_of_seqs 177 out of 1835
Neff 8.9
Searched_HMMs 46136
Date Fri Aug 16 19:38:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14104.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14104hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1581|consensus 100.0 2.5E-50 5.5E-55 346.8 27.5 307 6-312 9-317 (327)
2 KOG1580|consensus 100.0 1.2E-50 2.6E-55 336.2 17.6 311 4-314 6-319 (337)
3 PF08449 UAA: UAA transporter 100.0 3.1E-44 6.6E-49 326.1 32.3 297 12-313 1-302 (303)
4 KOG1582|consensus 100.0 7.5E-40 1.6E-44 277.0 17.8 292 7-308 39-332 (367)
5 TIGR00817 tpt Tpt phosphate/ph 100.0 1.3E-34 2.8E-39 263.1 28.3 289 11-315 2-299 (302)
6 PTZ00343 triose or hexose phos 100.0 1.9E-33 4.1E-38 259.7 31.6 291 4-309 42-349 (350)
7 KOG1441|consensus 100.0 5.6E-31 1.2E-35 235.1 11.6 293 9-316 15-315 (316)
8 PLN00411 nodulin MtN21 family 100.0 1E-27 2.2E-32 221.0 31.5 291 7-308 9-328 (358)
9 PRK11689 aromatic amino acid e 100.0 9.9E-26 2.2E-30 204.0 29.3 247 48-307 32-286 (295)
10 PF06027 DUF914: Eukaryotic pr 99.9 1.3E-25 2.8E-30 203.2 26.6 234 76-313 75-310 (334)
11 PRK11272 putative DMT superfam 99.9 5.3E-25 1.1E-29 199.1 30.2 248 47-308 35-285 (292)
12 KOG1583|consensus 99.9 1.3E-27 2.9E-32 203.3 12.1 288 11-309 3-315 (330)
13 KOG1443|consensus 99.9 3.4E-26 7.4E-31 197.6 20.2 283 9-307 14-314 (349)
14 KOG1444|consensus 99.9 1.4E-25 3E-30 196.4 24.0 296 7-316 8-308 (314)
15 PRK11453 O-acetylserine/cystei 99.9 3E-24 6.6E-29 194.7 31.6 251 48-308 32-287 (299)
16 PRK15430 putative chlorampheni 99.9 1.2E-24 2.6E-29 197.1 27.4 271 10-307 7-284 (296)
17 TIGR00950 2A78 Carboxylate/Ami 99.9 2.5E-24 5.4E-29 191.3 27.5 242 46-303 16-259 (260)
18 PRK10532 threonine and homoser 99.9 7.1E-24 1.5E-28 191.7 30.7 277 10-315 11-288 (293)
19 KOG1442|consensus 99.9 2.9E-26 6.4E-31 194.9 3.3 305 5-317 22-336 (347)
20 COG5070 VRG4 Nucleotide-sugar 99.9 8.5E-23 1.8E-27 169.0 16.1 294 15-316 10-304 (309)
21 TIGR03340 phn_DUF6 phosphonate 99.9 5E-21 1.1E-25 172.2 23.5 262 20-305 10-280 (281)
22 COG0697 RhaT Permeases of the 99.9 3.8E-18 8.2E-23 153.3 31.7 247 48-308 36-287 (292)
23 TIGR00688 rarD rarD protein. T 99.8 1.9E-18 4E-23 153.4 25.9 238 17-283 8-255 (256)
24 PF04142 Nuc_sug_transp: Nucle 99.8 4.6E-18 1E-22 148.9 20.5 218 78-299 15-244 (244)
25 TIGR00776 RhaT RhaT L-rhamnose 99.8 2.1E-16 4.6E-21 142.5 27.5 236 55-307 33-287 (290)
26 KOG4510|consensus 99.8 4.5E-19 9.7E-24 150.8 6.1 254 48-308 64-325 (346)
27 COG2962 RarD Predicted permeas 99.8 1.9E-15 4.2E-20 131.2 28.3 253 48-318 34-293 (293)
28 KOG2234|consensus 99.8 2.1E-15 4.6E-20 134.4 27.7 266 42-312 42-326 (345)
29 COG5006 rhtA Threonine/homoser 99.7 5.5E-15 1.2E-19 125.2 25.8 242 48-308 40-282 (292)
30 KOG3912|consensus 99.7 1.4E-15 3.1E-20 130.4 22.1 224 82-307 88-333 (372)
31 KOG2765|consensus 99.7 4.8E-17 1E-21 144.8 13.3 225 86-311 165-393 (416)
32 PF03151 TPT: Triose-phosphate 99.7 5E-16 1.1E-20 126.8 15.6 141 168-308 1-153 (153)
33 TIGR00803 nst UDP-galactose tr 99.7 4.7E-16 1E-20 135.1 13.8 195 104-306 2-222 (222)
34 KOG2766|consensus 99.6 3.9E-16 8.4E-21 132.2 0.2 227 74-308 72-299 (336)
35 COG2510 Predicted membrane pro 99.2 6.4E-11 1.4E-15 90.4 8.7 134 169-307 5-138 (140)
36 PF00892 EamA: EamA-like trans 99.2 2.5E-10 5.5E-15 89.2 10.8 123 178-307 2-125 (126)
37 PF06800 Sugar_transport: Suga 99.0 1.3E-07 2.8E-12 83.1 22.0 212 81-305 46-268 (269)
38 PF00892 EamA: EamA-like trans 99.0 1.3E-09 2.9E-14 85.1 8.5 118 23-150 3-124 (126)
39 PRK15430 putative chlorampheni 99.0 4.5E-08 9.7E-13 88.8 17.7 139 165-307 6-144 (296)
40 PF13536 EmrE: Multidrug resis 99.0 3.8E-09 8.2E-14 81.7 9.1 102 54-156 3-110 (113)
41 TIGR00688 rarD rarD protein. T 98.9 6.8E-08 1.5E-12 85.6 16.7 138 167-307 2-141 (256)
42 KOG4314|consensus 98.8 2.6E-08 5.5E-13 82.0 7.9 214 82-307 55-275 (290)
43 PF05653 Mg_trans_NIPA: Magnes 98.7 6.6E-07 1.4E-11 80.9 15.7 211 84-307 53-291 (300)
44 TIGR03340 phn_DUF6 phosphonate 98.7 3.8E-07 8.2E-12 82.1 14.0 132 169-307 3-134 (281)
45 PRK02971 4-amino-4-deoxy-L-ara 98.6 2.6E-06 5.6E-11 67.2 14.4 117 167-307 2-121 (129)
46 PLN00411 nodulin MtN21 family 98.6 2.2E-06 4.7E-11 79.6 16.0 137 168-308 14-156 (358)
47 COG2510 Predicted membrane pro 98.5 2.6E-06 5.6E-11 65.4 11.3 105 48-152 31-139 (140)
48 TIGR00950 2A78 Carboxylate/Ami 98.5 5.2E-06 1.1E-10 73.5 14.9 131 10-147 127-259 (260)
49 COG2962 RarD Predicted permeas 98.4 8.3E-06 1.8E-10 71.6 14.7 139 166-308 6-144 (293)
50 PF03151 TPT: Triose-phosphate 98.4 9.3E-06 2E-10 65.9 14.4 135 15-151 4-152 (153)
51 PF13536 EmrE: Multidrug resis 98.4 9E-06 1.9E-10 62.7 13.3 100 206-308 6-106 (113)
52 PRK11272 putative DMT superfam 98.3 1.6E-05 3.4E-10 72.0 14.1 132 12-153 151-286 (292)
53 PRK15051 4-amino-4-deoxy-L-ara 98.3 2.1E-05 4.5E-10 60.4 11.4 63 89-151 46-108 (111)
54 PRK13499 rhamnose-proton sympo 98.2 0.0025 5.4E-08 58.5 25.4 222 84-307 77-340 (345)
55 TIGR00817 tpt Tpt phosphate/ph 98.2 7.8E-05 1.7E-09 67.7 15.2 127 175-307 10-136 (302)
56 PRK11453 O-acetylserine/cystei 98.2 7.3E-05 1.6E-09 67.9 14.9 123 170-307 7-131 (299)
57 PTZ00343 triose or hexose phos 98.1 0.00011 2.4E-09 68.3 15.3 134 169-307 51-185 (350)
58 PRK11689 aromatic amino acid e 98.1 9.1E-05 2E-09 67.1 14.3 129 167-307 4-136 (295)
59 PRK10532 threonine and homoser 98.1 0.00011 2.5E-09 66.4 14.4 132 13-154 150-283 (293)
60 PRK15051 4-amino-4-deoxy-L-ara 98.0 5E-05 1.1E-09 58.3 9.7 62 246-307 47-108 (111)
61 PF08449 UAA: UAA transporter 98.0 0.00015 3.3E-09 65.9 13.1 123 182-311 15-139 (303)
62 TIGR00776 RhaT RhaT L-rhamnose 97.9 0.00014 3.1E-09 65.7 11.9 130 168-308 2-136 (290)
63 KOG2922|consensus 97.8 0.00031 6.7E-09 62.6 11.3 215 85-307 68-305 (335)
64 PRK10452 multidrug efflux syst 97.7 0.00047 1E-08 53.4 10.4 72 83-154 33-105 (120)
65 COG0697 RhaT Permeases of the 97.7 0.0018 3.8E-08 57.8 15.8 138 165-308 5-143 (292)
66 PRK13499 rhamnose-proton sympo 97.6 0.0019 4.1E-08 59.3 14.3 140 165-312 5-157 (345)
67 COG2076 EmrE Membrane transpor 97.6 0.00078 1.7E-08 50.6 9.4 72 81-152 31-103 (106)
68 PRK02971 4-amino-4-deoxy-L-ara 97.6 0.00039 8.4E-09 54.8 8.1 70 84-153 51-123 (129)
69 PRK11431 multidrug efflux syst 97.6 0.0013 2.9E-08 49.7 10.4 69 83-151 32-101 (105)
70 PRK10650 multidrug efflux syst 97.6 0.0013 2.8E-08 50.1 10.3 68 83-150 38-106 (109)
71 PF04657 DUF606: Protein of un 97.6 0.0036 7.9E-08 50.0 13.4 130 169-304 3-137 (138)
72 PRK10452 multidrug efflux syst 97.6 0.00075 1.6E-08 52.3 9.0 66 245-310 39-105 (120)
73 PRK09541 emrE multidrug efflux 97.5 0.0014 3.1E-08 50.0 10.1 69 85-153 35-104 (110)
74 PRK09541 emrE multidrug efflux 97.5 0.0011 2.4E-08 50.6 9.3 65 246-310 40-105 (110)
75 PF06027 DUF914: Eukaryotic pr 97.4 0.0032 6.9E-08 57.7 12.8 75 235-309 78-152 (334)
76 PRK10650 multidrug efflux syst 97.3 0.0081 1.8E-07 45.7 12.3 62 245-306 44-106 (109)
77 PF04142 Nuc_sug_transp: Nucle 97.3 0.0013 2.8E-08 57.9 9.0 69 241-309 22-90 (244)
78 COG4975 GlcU Putative glucose 97.3 0.00015 3.3E-09 62.1 2.5 209 86-307 65-284 (288)
79 PRK11431 multidrug efflux syst 97.3 0.0033 7.2E-08 47.6 9.4 63 245-307 38-101 (105)
80 PF06800 Sugar_transport: Suga 97.3 0.0034 7.4E-08 55.5 10.7 115 194-314 9-128 (269)
81 COG2076 EmrE Membrane transpor 97.1 0.005 1.1E-07 46.3 8.7 63 246-308 40-103 (106)
82 PF05653 Mg_trans_NIPA: Magnes 97.0 0.0038 8.1E-08 56.6 8.9 124 164-313 4-127 (300)
83 PF00893 Multi_Drug_Res: Small 96.8 0.011 2.3E-07 43.8 8.5 57 87-143 36-93 (93)
84 KOG1441|consensus 96.8 0.0065 1.4E-07 55.1 8.2 141 7-152 159-307 (316)
85 PF00893 Multi_Drug_Res: Small 96.6 0.0096 2.1E-07 44.1 6.7 55 245-299 38-93 (93)
86 TIGR00803 nst UDP-galactose tr 96.4 0.026 5.6E-07 48.7 9.3 64 86-149 158-221 (222)
87 COG3238 Uncharacterized protei 96.4 0.13 2.8E-06 41.4 12.2 137 166-307 4-145 (150)
88 PF10639 UPF0546: Uncharacteri 96.2 0.011 2.4E-07 45.2 5.1 69 82-150 43-112 (113)
89 KOG2234|consensus 96.1 0.3 6.6E-06 44.5 14.8 64 244-307 100-163 (345)
90 KOG4510|consensus 95.7 0.0035 7.5E-08 54.6 0.7 68 240-307 101-168 (346)
91 PF10639 UPF0546: Uncharacteri 95.6 0.12 2.6E-06 39.6 8.7 60 246-305 51-111 (113)
92 PF04657 DUF606: Protein of un 95.5 0.61 1.3E-05 37.2 12.8 102 47-149 29-138 (138)
93 COG4975 GlcU Putative glucose 95.3 0.0086 1.9E-07 51.6 1.5 132 168-311 3-139 (288)
94 COG5006 rhtA Threonine/homoser 95.3 0.55 1.2E-05 41.0 12.3 58 94-151 224-281 (292)
95 PF06379 RhaT: L-rhamnose-prot 94.6 1.2 2.5E-05 40.8 13.3 147 165-317 5-162 (344)
96 KOG2765|consensus 94.3 0.9 1.9E-05 41.9 11.9 132 20-154 253-392 (416)
97 KOG1581|consensus 93.6 0.49 1.1E-05 42.3 8.7 134 10-150 171-311 (327)
98 KOG1580|consensus 92.2 0.33 7.1E-06 41.8 5.3 75 78-152 239-313 (337)
99 KOG1582|consensus 91.0 1.5 3.3E-05 38.7 8.2 138 10-154 189-334 (367)
100 KOG4314|consensus 89.4 0.26 5.6E-06 41.3 2.2 65 249-313 66-130 (290)
101 KOG3912|consensus 87.7 1.3 2.9E-05 39.3 5.5 64 244-307 94-157 (372)
102 PF07857 DUF1632: CEO family ( 86.3 1.5 3.2E-05 38.7 5.2 70 244-313 63-139 (254)
103 KOG2922|consensus 84.8 0.33 7.2E-06 43.7 0.4 124 164-313 18-141 (335)
104 COG3238 Uncharacterized protei 81.1 13 0.00029 29.9 8.2 105 46-151 32-145 (150)
105 COG5070 VRG4 Nucleotide-sugar 80.9 9.3 0.0002 32.9 7.5 70 82-151 226-295 (309)
106 KOG4831|consensus 80.1 3 6.4E-05 31.3 3.8 70 82-151 54-124 (125)
107 KOG1444|consensus 78.7 37 0.00079 30.9 11.0 135 168-307 13-148 (314)
108 KOG2766|consensus 78.2 0.84 1.8E-05 39.9 0.5 72 236-307 78-149 (336)
109 PF02694 UPF0060: Uncharacteri 74.6 5.7 0.00012 29.9 4.0 36 119-154 70-105 (107)
110 PRK02237 hypothetical protein; 74.3 5.6 0.00012 30.0 3.9 35 120-154 73-107 (109)
111 PRK02237 hypothetical protein; 71.6 41 0.0009 25.4 8.9 44 264-307 61-104 (109)
112 PF02694 UPF0060: Uncharacteri 69.6 33 0.00071 25.9 7.0 44 264-307 59-102 (107)
113 PRK06638 NADH:ubiquinone oxido 66.6 79 0.0017 26.7 10.9 26 277-302 133-158 (198)
114 PF04342 DUF486: Protein of un 65.9 7.3 0.00016 29.2 3.0 29 277-305 77-105 (108)
115 PF04342 DUF486: Protein of un 60.8 70 0.0015 24.1 8.4 35 116-150 72-106 (108)
116 COG1742 Uncharacterized conser 60.7 12 0.00027 27.9 3.4 35 120-154 72-106 (109)
117 PF04971 Lysis_S: Lysis protei 60.2 8.1 0.00018 26.5 2.1 31 286-316 26-62 (68)
118 PF15099 PIRT: Phosphoinositid 59.4 7.7 0.00017 30.0 2.2 8 295-302 91-98 (129)
119 PF05297 Herpes_LMP1: Herpesvi 55.8 3.8 8.3E-05 36.3 0.0 98 100-203 43-142 (381)
120 COG3169 Uncharacterized protei 55.1 16 0.00034 27.1 3.0 29 277-305 84-112 (116)
121 PF05961 Chordopox_A13L: Chord 53.5 13 0.00027 25.4 2.2 26 291-316 5-30 (68)
122 PF02439 Adeno_E3_CR2: Adenovi 49.5 16 0.00034 22.0 1.9 22 293-315 13-34 (38)
123 PF07168 Ureide_permease: Urei 47.8 15 0.00033 33.1 2.5 135 173-310 2-148 (336)
124 KOG1583|consensus 47.3 12 0.00025 33.4 1.6 47 270-316 99-145 (330)
125 MTH00057 ND6 NADH dehydrogenas 47.2 1.7E+02 0.0037 24.5 9.7 27 277-303 132-158 (186)
126 COG3169 Uncharacterized protei 46.7 31 0.00066 25.6 3.4 30 121-150 84-113 (116)
127 cd01324 cbb3_Oxidase_CcoQ Cyto 45.3 21 0.00045 22.7 2.2 20 296-315 19-38 (48)
128 PF05545 FixQ: Cbb3-type cytoc 43.8 20 0.00044 22.7 2.0 19 296-315 18-36 (49)
129 PRK11357 frlA putative fructos 43.2 3E+02 0.0065 26.1 17.8 22 294-315 419-440 (445)
130 PF05393 Hum_adeno_E3A: Human 42.2 23 0.0005 25.6 2.2 26 293-318 37-63 (94)
131 TIGR00739 yajC preprotein tran 42.1 17 0.00036 26.2 1.5 21 297-317 9-29 (84)
132 PF02673 BacA: Bacitracin resi 40.3 2.6E+02 0.0057 24.7 10.6 47 47-94 110-158 (259)
133 PF04246 RseC_MucC: Positive r 40.2 30 0.00065 27.1 2.9 17 265-281 70-86 (135)
134 COG3086 RseC Positive regulato 38.0 54 0.0012 26.2 3.9 25 259-283 71-95 (150)
135 PF09656 PGPGW: Putative trans 37.8 1.2E+02 0.0025 19.8 5.2 44 136-191 5-48 (53)
136 PHA03049 IMV membrane protein; 35.8 34 0.00074 23.3 2.1 25 292-316 6-30 (68)
137 COG2116 FocA Formate/nitrite f 35.6 2.9E+02 0.0062 24.6 8.5 28 129-156 57-84 (265)
138 PRK12437 prolipoprotein diacyl 33.7 28 0.0006 31.0 1.9 25 288-312 235-259 (269)
139 PRK00052 prolipoprotein diacyl 33.3 32 0.0007 30.6 2.3 22 288-309 237-258 (269)
140 PF08693 SKG6: Transmembrane a 32.8 23 0.00051 21.6 0.9 17 295-311 22-38 (40)
141 PF11044 TMEMspv1-c74-12: Plec 31.1 63 0.0014 20.1 2.6 17 289-305 3-19 (49)
142 PRK05585 yajC preprotein trans 30.2 38 0.00082 25.6 1.9 21 296-316 23-43 (106)
143 PF11431 Transport_MerF: Membr 29.2 35 0.00076 21.4 1.3 19 296-314 27-45 (46)
144 PF14316 DUF4381: Domain of un 27.9 30 0.00066 27.6 1.1 31 289-319 22-52 (146)
145 PRK13108 prolipoprotein diacyl 27.6 3.3E+02 0.0071 26.5 8.1 24 288-311 254-277 (460)
146 KOG1442|consensus 26.3 22 0.00047 31.8 -0.0 54 252-305 118-171 (347)
147 PF14880 COX14: Cytochrome oxi 25.0 32 0.0007 22.9 0.6 25 286-310 14-38 (59)
148 PF10754 DUF2569: Protein of u 25.0 1.5E+02 0.0032 23.7 4.6 26 165-190 119-144 (149)
149 KOG4831|consensus 24.7 79 0.0017 23.9 2.6 58 248-305 64-122 (125)
150 PF08627 CRT-like: CRT-like; 24.3 1.6E+02 0.0036 22.9 4.4 54 5-65 51-104 (130)
151 PF07444 Ycf66_N: Ycf66 protei 24.3 75 0.0016 22.9 2.4 22 287-308 4-25 (84)
152 PF15102 TMEM154: TMEM154 prot 23.9 34 0.00073 27.4 0.6 19 293-311 66-84 (146)
153 PHA03265 envelope glycoprotein 23.2 49 0.0011 30.5 1.6 22 297-318 360-381 (402)
154 PF05568 ASFV_J13L: African sw 22.5 76 0.0016 25.3 2.3 22 295-316 37-58 (189)
155 TIGR01167 LPXTG_anchor LPXTG-m 22.2 83 0.0018 17.8 2.0 15 287-301 9-23 (34)
156 PF08114 PMP1_2: ATPase proteo 21.5 86 0.0019 19.2 1.9 19 300-318 24-42 (43)
157 PF15108 TMEM37: Voltage-depen 21.2 2.7E+02 0.0058 22.7 5.1 72 138-209 93-165 (184)
158 PF05297 Herpes_LMP1: Herpesvi 20.4 34 0.00073 30.6 0.0 67 246-312 118-188 (381)
159 TIGR00544 lgt prolipoprotein d 20.1 75 0.0016 28.5 2.2 21 288-308 246-266 (278)
160 PF10883 DUF2681: Protein of u 20.1 92 0.002 22.6 2.2 24 293-316 7-30 (87)
161 PF03729 DUF308: Short repeat 20.0 1E+02 0.0023 20.4 2.5 15 291-305 25-39 (72)
No 1
>KOG1581|consensus
Probab=100.00 E-value=2.5e-50 Score=346.76 Aligned_cols=307 Identities=33% Similarity=0.598 Sum_probs=287.5
Q ss_pred cccchhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHH
Q psy14104 6 SSKRLKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYAS 85 (319)
Q Consensus 6 ~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (319)
.|+-+++++|+.|+|+++..||++||++.+.+|++|+++|++|.+++++|.+.+.+..+++++++++..+.+.|+++|..
T Consensus 9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~k~~~~~~apl~~y~~ 88 (327)
T KOG1581|consen 9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWWKKELSGVAPLYKYSL 88 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcccccCCCCCchhHHhH
Confidence 46779999999999999999999999999999998999999999999999999999999888777767788899999999
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCC--CCCc
Q psy14104 86 AAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASK--EEST 163 (319)
Q Consensus 86 ~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~--~~~~ 163 (319)
+++.+..+.+++++||+|+|+|++++.|+|+.++||+++.++.|+|+++.+++...++..|+.++...+.+.+. ..++
T Consensus 89 is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~~~g~~ 168 (327)
T KOG1581|consen 89 ISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSSKSGRE 168 (327)
T ss_pred HHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999986543321 2234
Q ss_pred chhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHH
Q psy14104 164 NFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFS 243 (319)
Q Consensus 164 ~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 243 (319)
+.++|+.++..+.++|++.+..|+++.++++.+++++|++.|+++++......+..|..+++.++...+|+.++++++++
T Consensus 169 ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s 248 (327)
T KOG1581|consen 169 NSPIGILLLFGYLLFDGFTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYS 248 (327)
T ss_pred CchHhHHHHHHHHHHHhhHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHH
Confidence 67999999999999999999999999999999999999999999999988888888888899999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcch
Q psy14104 244 VLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSK 312 (319)
Q Consensus 244 ~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~ 312 (319)
.|+++||.++++.++++||.+.+.+++.|++++++++.+.||++++..||.|+.++++|+.+..+.++|
T Consensus 249 ~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~ 317 (327)
T KOG1581|consen 249 TCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKK 317 (327)
T ss_pred HhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999999999999999999999998865544
No 2
>KOG1580|consensus
Probab=100.00 E-value=1.2e-50 Score=336.19 Aligned_cols=311 Identities=53% Similarity=0.903 Sum_probs=289.0
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhhhhhcccccCCC---CccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchh
Q psy14104 4 LLSSKRLKFLFYAGGIFTFYFLFGILQEKITRGTYGES---NEKFTCMLALVFVQCVINYIYAKIMLLTFLKQGEDSTRS 80 (319)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~---~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~ 80 (319)
-+.+++-|+++|+.|++.+|..||+.||++++..||.| .++|++.+.++|+||.++.++.-+....+++.+.++.|.
T Consensus 6 s~lper~rf~ica~GifvCYF~yGI~QEkitrGkYg~~g~~~E~FTfalaLVf~qC~~N~vfAkvl~~ir~~~~~D~t~~ 85 (337)
T KOG1580|consen 6 SWLPERGRFLICAGGIFVCYFVYGIQQEKITRGKYGLPGESIEKFTFALALVFFQCTANTVFAKVLFLIRKKTEIDNTPT 85 (337)
T ss_pred cccccccceeEEecchhheehhhhhHHHHhhccccCCCCcchheehHHHHHHHHHHHHHHHHHHhheeecccccccCCcc
Confidence 35688999999999999999999999999999999853 689999999999999999999977665555567788889
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCC
Q psy14104 81 VYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKE 160 (319)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~ 160 (319)
+.|...+..+.+++..+|.+++|+|+|++.+.|+++||++|+++.++.+++++|+++..++++++||+++++.+...++.
T Consensus 86 ~~YaAcs~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~ 165 (337)
T KOG1580|consen 86 KMYAACSASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGA 165 (337)
T ss_pred hHHHHHHHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999988765554
Q ss_pred CCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHH
Q psy14104 161 ESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLF 240 (319)
Q Consensus 161 ~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~ 240 (319)
.+.....|-++.++|..+|++....|+++.+.+..+...+|+|.|+++.+.+....+++||+++...+.+++|..|+.+.
T Consensus 166 e~~t~g~GElLL~lSL~mDGlTg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~ 245 (337)
T KOG1580|consen 166 EDKTFGFGELLLILSLAMDGLTGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLT 245 (337)
T ss_pred cccccchHHHHHHHHHHhcccchhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHH
Confidence 44456799999999999999999999999998888899999999999999998888999999998888899999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchhh
Q psy14104 241 LFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKES 314 (319)
Q Consensus 241 ~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~~ 314 (319)
++++++.+||.++|..+..+||.+.|++++.|+.++++.|+++|++|++..||+|..+++.|......++|+.+
T Consensus 246 l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a~ 319 (337)
T KOG1580|consen 246 LLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKAP 319 (337)
T ss_pred HHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999888877543
No 3
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=100.00 E-value=3.1e-44 Score=326.07 Aligned_cols=297 Identities=41% Similarity=0.655 Sum_probs=268.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHHHHHHHH
Q psy14104 12 FLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYASAAMTYL 91 (319)
Q Consensus 12 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (319)
+++|++|+++++..++++||++++++++ .++|.++++.|+..+.+...+.....+++++++.|++++++.++++.
T Consensus 1 ~~~~~~~i~~~~~~~g~~qE~i~~~~~~-----~~~~~~lt~~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (303)
T PF08449_consen 1 FLICVAGIFGGCCSYGILQEKIMTTPYG-----SPFPLFLTFVQFAFNALFSFILLSLFKFPKSRKIPLKKYAILSFLFF 75 (303)
T ss_pred CEeeHHHHHHHHHHHHHHHHHHHcCCCC-----CcccHHHHHHHHHHHHHHHHHHHHhccccCCCcChHHHHHHHHHHHH
Confidence 4689999999999999999999988854 17899999999999999988876554446778899999999999999
Q ss_pred HHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCC---cchhhH
Q psy14104 92 LAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEES---TNFGFG 168 (319)
Q Consensus 92 ~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~---~~~~~G 168 (319)
+++.++|.|++|+|+|+++++|+++|+++|+++.+++|||++++|+.+++++++|++++..+|.+.+++.+ .....|
T Consensus 76 ~~~~~~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G 155 (303)
T PF08449_consen 76 LASVLSNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALG 155 (303)
T ss_pred HHHHHHHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhH
Confidence 99999999999999999999999999999999999999999999999999999999999987754332211 122359
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHH--hCchhHHHHhhhhchHHHHHHHHHHHHH
Q psy14104 169 EFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILI--TGEIFEFINFVNKYPSIIYQLFLFSVLS 246 (319)
Q Consensus 169 ~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 246 (319)
+++++.|.+++|+..++||++.++++.++.|+++|.|.++.++..+..+. .+|..+..++...+|+.+..++..++++
T Consensus 156 ~~ll~~sl~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~~~ 235 (303)
T PF08449_consen 156 IILLLLSLLLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSLTG 235 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998888777 7888888888888888888999999999
Q ss_pred HHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchh
Q psy14104 247 ALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKE 313 (319)
Q Consensus 247 ~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~ 313 (319)
++++.+.+..+++.||++.++++++|++.++++|+++|||++++.||+|+++++.|..+|++.++||
T Consensus 236 ~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 236 ALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred HHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999999999999999999999999544333
No 4
>KOG1582|consensus
Probab=100.00 E-value=7.5e-40 Score=277.01 Aligned_cols=292 Identities=29% Similarity=0.444 Sum_probs=268.8
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCcccc-chhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHH
Q psy14104 7 SKRLKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFT-CMLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYAS 85 (319)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~-~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 85 (319)
|+-.|+++|.+|+++.|..||++||.+++. ++|+ +.|.+++.|+++...+.++.+..+ +.+++.+|||.|..
T Consensus 39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~------~gfkp~GWylTlvQf~~Ysg~glie~~~~-~~k~r~iP~rtY~~ 111 (367)
T KOG1582|consen 39 PKWTQFLICSAGVFFLYLVYGYLQELIFNV------EGFKPFGWYLTLVQFLVYSGFGLIELQLI-QTKRRVIPWRTYVI 111 (367)
T ss_pred chhhhHHHHHhHHHHHHHHHHHHHHHHhcc------ccCcccchHHHHHHHHHHHhhhheEEEee-cccceecchhHhhh
Confidence 455899999999999999999999999855 4666 789999999999887777765432 45778899999999
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcch
Q psy14104 86 AAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNF 165 (319)
Q Consensus 86 ~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~ 165 (319)
++.+..+.+.++|-|+.|+++|+++++|+|+.++||+.+.++-++|+++.+++++.++.+|.+.+...|.+.+++++
T Consensus 112 la~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sPNF~--- 188 (367)
T KOG1582|consen 112 LAFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSPNFN--- 188 (367)
T ss_pred hHhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCCCcc---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999988877664
Q ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchH-HHHHHHHHHH
Q psy14104 166 GFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPS-IIYQLFLFSV 244 (319)
Q Consensus 166 ~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~-~~~~i~~~~~ 244 (319)
..|..+..++.++||+....|||.++.++.+..|+.+|+..++.++.+.....+||+.++|.+-..+|. ...+..+.+.
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~ 268 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL 268 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH
Confidence 799999999999999999999999998888999999999999999999888899999999888776775 6777788888
Q ss_pred HHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 245 LSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 245 ~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
.+++|+.+....++..||.+++.+++.|+.+++++|+++|.+|+|.++.-|..+++.|+++..+
T Consensus 269 ~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~y 332 (367)
T KOG1582|consen 269 AGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMY 332 (367)
T ss_pred HhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcc
Confidence 9999999999999999999999999999999999999999999999999999999999999874
No 5
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=100.00 E-value=1.3e-34 Score=263.12 Aligned_cols=289 Identities=16% Similarity=0.167 Sum_probs=228.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHH--HhcCCCCCchhhhHHHHHH
Q psy14104 11 KFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLT--FLKQGEDSTRSVYYASAAM 88 (319)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 88 (319)
+....+..||..++.+.++||++. +.|++|.++++.|+.++.+.+.+..+. .++++.++++++..++.|+
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l--------~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 73 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLL--------NVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLKISSALLKLLLPVAI 73 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH--------hhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHH
Confidence 566788999999999999999997 247889999999999998877665321 1122334556777889999
Q ss_pred HHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhhH
Q psy14104 89 TYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGFG 168 (319)
Q Consensus 89 ~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G 168 (319)
++..+..++|.|++|++++++++++++.|+++++++.+++|||++++++.+++++++|+.+...++. +.+..|
T Consensus 74 ~~~~~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~~~-------~~~~~G 146 (302)
T TIGR00817 74 VHTIGHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDTEL-------SFNWAG 146 (302)
T ss_pred HHHHHHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCCcc-------cccHHH
Confidence 9888889999999999999999999999999999999999999999999999999999987653222 123679
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhH-HHHhhh----hchHHHHH-HHHH
Q psy14104 169 EFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFE-FINFVN----KYPSIIYQ-LFLF 242 (319)
Q Consensus 169 ~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~----~~~~~~~~-i~~~ 242 (319)
++++++|+++++++.++.|+..++.+.++.+.+.|++..+.+.+.|.....++... ..+... ..+..... .+..
T Consensus 147 ~~~~l~a~~~~a~~~v~~k~~~~~~~~~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (302)
T TIGR00817 147 FLSAMISNITFVSRNIFSKKAMTIKSLDKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLVA 226 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHHH
Confidence 99999999999999999999876445788999999999999988888765433211 101100 01111221 2222
Q ss_pred HH-HHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchhhh
Q psy14104 243 SV-LSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKESA 315 (319)
Q Consensus 243 ~~-~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~~~ 315 (319)
+. +....+..++.+++++||+++++.++++|++++++|++++||++|+.+++|.++++.|+.+|+. .|+|||
T Consensus 227 ~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~-~k~~~~ 299 (302)
T TIGR00817 227 AMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSR-VKAQKP 299 (302)
T ss_pred HHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHH-HhccCc
Confidence 22 2334445677899999999999999999999999999999999999999999999999999994 333333
No 6
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=100.00 E-value=1.9e-33 Score=259.69 Aligned_cols=291 Identities=13% Similarity=0.136 Sum_probs=228.9
Q ss_pred cccccchhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcC-CC---CCch
Q psy14104 4 LLSSKRLKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQ-GE---DSTR 79 (319)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~-~~---~~~~ 79 (319)
.+.++++|....++.||+.+..+.+.+|.+. +.+++|++++++|++++.+++.+.+....++ ++ .+..
T Consensus 42 ~~~~~~~~~~~~~~~wy~~s~~~~~~nK~vl--------~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 113 (350)
T PTZ00343 42 SFPNFKWKLALLFLTWYALNVLYVVDNKLAL--------NMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIKSLKLF 113 (350)
T ss_pred ccCcccHHHHHHHHHHHHHHHHHHHHHHHHH--------HhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCCCHHHH
Confidence 4556789999999999999999999999997 3478899999999999988776654321111 11 1234
Q ss_pred hhhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCC
Q psy14104 80 SVYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASK 159 (319)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~ 159 (319)
++..++.|+++.......+.|+++++++.++++|++.|+++++++++++|||++++++++++++++|+.+...+|.+
T Consensus 114 ~~~llp~gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~~~--- 190 (350)
T PTZ00343 114 LKNFLPQGLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKELH--- 190 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheecccch---
Confidence 67789999998888888899999999999999999999999999999999999999999999999999998864432
Q ss_pred CCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcC-----CChhhHHHHhHHHHHHHHHHHHHHhCc-h-hHHHHh--hh
Q psy14104 160 EESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQ-----TKSGHMMVAMNKWSCLFLGISILITGE-I-FEFINF--VN 230 (319)
Q Consensus 160 ~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~g~-~-~~~~~~--~~ 230 (319)
.+..|++++++|++++++++++.|+..++++ .++.+...+..+++.++++|....... . ...++. ..
T Consensus 191 ----~~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~ 266 (350)
T PTZ00343 191 ----FTWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTAN 266 (350)
T ss_pred ----hHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhc
Confidence 2468999999999999999999999886542 456667777788999999988763321 1 111100 00
Q ss_pred hchHHHHHHHHH----HHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHH
Q psy14104 231 KYPSIIYQLFLF----SVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLD 306 (319)
Q Consensus 231 ~~~~~~~~i~~~----~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~ 306 (319)
.....+..++.. +++....+...+.++++++|.++++.+++||++++++|++++||++|+.+++|.++++.|+++|
T Consensus 267 ~~~~~~~~~l~~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lY 346 (350)
T PTZ00343 267 MTNYTKGIIIFKIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLY 346 (350)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHH
Confidence 001111111222 2233334444557999999999999999999999999999999999999999999999999999
Q ss_pred Hhh
Q psy14104 307 SFY 309 (319)
Q Consensus 307 ~~~ 309 (319)
++.
T Consensus 347 s~~ 349 (350)
T PTZ00343 347 SLF 349 (350)
T ss_pred hhc
Confidence 864
No 7
>KOG1441|consensus
Probab=99.97 E-value=5.6e-31 Score=235.11 Aligned_cols=293 Identities=19% Similarity=0.181 Sum_probs=242.8
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCC----CCCchhhhHH
Q psy14104 9 RLKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQG----EDSTRSVYYA 84 (319)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~~~ 84 (319)
..+-.++.+.||+++..+..+|+++.+. .+|++|.+++.+|..++.+...+... .+..+ +++.+++..+
T Consensus 15 ~~~~~~~~~~w~~~~v~~~~~nK~il~~------~~f~~p~~lt~~~~~~~~l~~~v~~~-l~~~~~~~~~~~~~~~~ll 87 (316)
T KOG1441|consen 15 ILRIGIAFAIWYVLSVGVIILNKYILSK------YGFPFPITLTMLHLFCGALALLVIKV-LKLVPPSKISSKLPLRTLL 87 (316)
T ss_pred hHHHHHHHHHHhhhheeeEEeeHhhhcc------CCCCCccHHHHHHHHHHHHHHHHHHH-hcCCCCCccccccchHHHH
Confidence 3455577899999999999999999743 47999999999999888877766543 22222 2446789999
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcc
Q psy14104 85 SAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTN 164 (319)
Q Consensus 85 ~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~ 164 (319)
++|+..+.+.++.|.|++++|+++++++|++.|+++.++++++.+|++++..+.+++.++.||.+....|.+.
T Consensus 88 pl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e~~f------- 160 (316)
T KOG1441|consen 88 PLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTELSF------- 160 (316)
T ss_pred HHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeeccccc-------
Confidence 9999999999999999999999999999999999999999999999999999999999999999999877542
Q ss_pred hhhHHHHHHHHHHHHhhhHHHHHHHHh--hcCCChhhHHHHhHHHHHHHHH-HHHHH-hCchhHHHHhhhhchHHHHHHH
Q psy14104 165 FGFGEFLLILSLLMDGLTGAVQERMKS--ESQTKSGHMMVAMNKWSCLFLG-ISILI-TGEIFEFINFVNKYPSIIYQLF 240 (319)
Q Consensus 165 ~~~G~~l~~~s~~~~a~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~g~~~~~~~~~~~~~~~~~~i~ 240 (319)
+..|+..++.+.+..++++++.|++++ +++.++.+++.|+.+++...++ |.... +++....+.....+-. ....+
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~~-~~~~~ 239 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFVT-FLILL 239 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccchh-hHHHH
Confidence 489999999999999999999999984 5678999999999999999988 76543 2322200000001111 22334
Q ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchhhhh
Q psy14104 241 LFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKESAK 316 (319)
Q Consensus 241 ~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~~~~ 316 (319)
+.+++.+..|...|.++++++|+|.++.+++|.++.++.|+++|+|++|+.+..|+++.+.|+++|++.+++++++
T Consensus 240 ~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~ 315 (316)
T KOG1441|consen 240 LNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG 315 (316)
T ss_pred HHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 4457888889999999999999999999999999999999999999999999999999999999999665555543
No 8
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=99.97 E-value=1e-27 Score=220.98 Aligned_cols=291 Identities=11% Similarity=0.128 Sum_probs=214.0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhc-CCCCCchhh---h
Q psy14104 7 SKRLKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLK-QGEDSTRSV---Y 82 (319)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~---~ 82 (319)
++..+.......+...|..+..+.+...+..++ |..+.+.|+.++.+++.++...+++ ++.++.+++ .
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~--------~~~~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~~~~~~~ 80 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATSKGLN--------IYPFLGYSYLLASLLLLPSLFFTNRSRSLPPLSVSILSK 80 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCC--------ccHHHHHHHHHHHHHHHHHHHHHHHhcccCcchHHHHHH
Confidence 345666677778889999999999999876654 6678899999998888766543322 222333344 4
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHh------cccccchhhHHHHHHHHHhhhheeeecCC
Q psy14104 83 YASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLL------GRKSYALKKYFFVLLVVIGVALFIYKDGK 156 (319)
Q Consensus 83 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~------~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~ 156 (319)
+.+.+++......+.+.+++|++++.+.++.++.|+++++++.++ +|||.+++++++++++++|+.+....++.
T Consensus 81 l~l~g~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~ 160 (358)
T PLN00411 81 IGLLGFLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGP 160 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCc
Confidence 555666654455688999999999999999999999999999999 69999999999999999999987642211
Q ss_pred C------------------CCCCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHH-HHHH
Q psy14104 157 A------------------SKEESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLG-ISIL 217 (319)
Q Consensus 157 ~------------------~~~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 217 (319)
. ....+.+...|+++++.|+++||++.+.+++..++++ ++....++...++.+... +...
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~-~~~~~t~~~~~~~~~~~~~~~l~ 239 (358)
T PLN00411 161 RVFVASSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYP-AAFTVSFLYTVCVSIVTSMIGLV 239 (358)
T ss_pred ccccccccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC-cHhHHHHHHHHHHHHHHHHHHHH
Confidence 0 0001112367999999999999999999999887653 334545555554444333 3333
Q ss_pred HhCchhHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHh
Q psy14104 218 ITGEIFEFINFVNKYPSIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATF 297 (319)
Q Consensus 218 ~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~ 297 (319)
.+++-...+ ....+... ..+++.++.+.+++.++++++++.||.++++..+++|++++++|++++||++++.+++|.+
T Consensus 240 ~~~~~~~~~-~~~~~~~~-~~i~y~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~ 317 (358)
T PLN00411 240 VEKNNPSVW-IIHFDITL-ITIVTMAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGI 317 (358)
T ss_pred HccCCcccc-eeccchHH-HHHHHHHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHH
Confidence 222111111 01112222 2345555556678889999999999999999999999999999999999999999999999
Q ss_pred HHHHhHHHHHh
Q psy14104 298 IVFTGLFLDSF 308 (319)
Q Consensus 298 li~~Gv~~~~~ 308 (319)
+++.|+++..+
T Consensus 318 LIl~Gv~l~~~ 328 (358)
T PLN00411 318 LITLGFYAVMW 328 (358)
T ss_pred HHHHHHHHHHh
Confidence 99999999884
No 9
>PRK11689 aromatic amino acid exporter; Provisional
Probab=99.95 E-value=9.9e-26 Score=204.03 Aligned_cols=247 Identities=11% Similarity=0.053 Sum_probs=182.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHHHHHHHHHHHHHHHHHhcc----cchhHHHHhhhcchHHHHHH
Q psy14104 48 MLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYASAAMTYLLAMVCSNMALQW----INYPTQVIGKSAKPIPVMLL 123 (319)
Q Consensus 48 p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~----~~~~~~~i~~~~~pi~v~l~ 123 (319)
|..+.+.|+..+.+++.+.. ++++.++.+++.....++.......+.+.+++| .+.....++.++.|++++++
T Consensus 32 P~~~~~~R~~~a~l~l~~~~---~~~~~~~~~~~~~~~~~l~~~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll 108 (295)
T PRK11689 32 PVGGAAMIYSVSGLLLLLTV---GFPRLRQFPKRYLLAGGLLFVSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILF 108 (295)
T ss_pred hHHHHHHHHHHHHHHHHHHc---cccccccccHHHHHHHhHHHHHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHH
Confidence 89999999999888876542 111222333333343344455666677777765 56677789999999999999
Q ss_pred HHHhcccccchhhHHHHHHHHHhhhheeeecCCCCC----CCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhh
Q psy14104 124 GVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASK----EESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGH 199 (319)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~----~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~ 199 (319)
+++++|||++++++++++++++|++++..++.+.+. +...+...|+++++.|+++||.++++.|+..++ .++..
T Consensus 109 ~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~--~~~~~ 186 (295)
T PRK11689 109 AVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARG--KNGIT 186 (295)
T ss_pred HHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCC--CCchh
Confidence 999999999999999999999999998865431110 000123569999999999999999999997654 34443
Q ss_pred HHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHH
Q psy14104 200 MMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLG 279 (319)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~l 279 (319)
..+ ..+.+.+.+....+++.. ...+++.|..+++.++.+.+++.++++++|+.+|.++++..+++|++++++
T Consensus 187 ~~~---~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~ 258 (295)
T PRK11689 187 LFF---ILTALALWIKYFLSPQPA-----MVFSLPAIIKLLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAAL 258 (295)
T ss_pred HHH---HHHHHHHHHHHHHhcCcc-----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHH
Confidence 322 222233333222222211 122445666666677778889999999999999999999999999999999
Q ss_pred HHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 280 SIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 280 s~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
|++++||++++.+++|.++++.|+.+..
T Consensus 259 ~~~~lgE~~~~~~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 259 AALLLSTPLSFSFWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHhCCCCcHHHHHHHHHHHHhHHHHh
Confidence 9999999999999999999999988875
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.95 E-value=1.3e-25 Score=203.16 Aligned_cols=234 Identities=16% Similarity=0.199 Sum_probs=192.6
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecC
Q psy14104 76 DSTRSVYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDG 155 (319)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~ 155 (319)
.+.++++|++.+++.+.++++.+.|++|++++..+++.++..+++++++++++|+|+++.|++|+++++.|+.++...|.
T Consensus 75 ~~~~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~ 154 (334)
T PF06027_consen 75 LKRPWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDV 154 (334)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecc
Confidence 45678899999999999999999999999999999999999999999999999999999999999999999999998875
Q ss_pred CCCCC--CCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhch
Q psy14104 156 KASKE--ESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYP 233 (319)
Q Consensus 156 ~~~~~--~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 233 (319)
..+.+ ..++...|+++++.|+.+||++++.+|+..++ .+..+......++++++..|..... |..+..+. +.++
T Consensus 155 ~~~~~~~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~--~~~~~~lg~~Glfg~ii~~iq~~il-e~~~i~~~-~w~~ 230 (334)
T PF06027_consen 155 LSGSDSSSGSNPILGDLLALLGAILYAVSNVLEEKLVKK--APRVEFLGMLGLFGFIISGIQLAIL-ERSGIESI-HWTS 230 (334)
T ss_pred cccccCCCCCccchhHHHHHHHHHHHHHHHHHHHHhccc--CCHHHHHHHHHHHHHHHHHHHHHhe-ehhhhhcc-CCCh
Confidence 43221 12356899999999999999999999999875 4678888888889988877665432 22221122 2234
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchh
Q psy14104 234 SIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKE 313 (319)
Q Consensus 234 ~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~ 313 (319)
+.+...+..+++..+-+...-..++..||+..++....-++.+++++++++|+++++..++|.++++.|.++|+..++++
T Consensus 231 ~~~~~~v~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~ 310 (334)
T PF06027_consen 231 QVIGLLVGYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPE 310 (334)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcc
Confidence 44444444455555555566678999999999999999999999999999999999999999999999999998654443
No 11
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=99.95 E-value=5.3e-25 Score=199.05 Aligned_cols=248 Identities=13% Similarity=0.052 Sum_probs=194.0
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHHHHHHH-HHHHHHHHHHh-cccchhHHHHhhhcchHHHHHHH
Q psy14104 47 CMLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYASAAMTY-LLAMVCSNMAL-QWINYPTQVIGKSAKPIPVMLLG 124 (319)
Q Consensus 47 ~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~sl-~~~~~~~~~i~~~~~pi~v~l~~ 124 (319)
.|..+++.|+.++.+++.+....++++.+++++++.....+.+. .....+.+.+. ++++++.+.++.++.|+++++++
T Consensus 35 ~p~~~~~~R~~~a~l~ll~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla 114 (292)
T PRK11272 35 PPLMMAGVRFLIAGILLLAFLLLRGHPLPTLRQWLNAALIGLLLLAVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFS 114 (292)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHH
Confidence 38999999999998888776544332223344555666677664 45567778888 99999999999999999999999
Q ss_pred HHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHh
Q psy14104 125 VLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAM 204 (319)
Q Consensus 125 ~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 204 (319)
.+ +|||++++++++++++++|+.+...++. . +....|+++.++++++||.+.+..|+..++ ++.....+.
T Consensus 115 ~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-~-----~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~---~~~~~~~~~ 184 (292)
T PRK11272 115 RL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-L-----SGNPWGAILILIASASWAFGSVWSSRLPLP---VGMMAGAAE 184 (292)
T ss_pred HH-hcccCchhHHHHHHHHHHhHHHHhcCcc-c-----ccchHHHHHHHHHHHHHHHHHHHHHhcCCC---cchHHHHHH
Confidence 86 6999999999999999999998754321 1 123579999999999999999998886432 234455666
Q ss_pred HHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHH-HHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHh
Q psy14104 205 NKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSV-LSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIF 283 (319)
Q Consensus 205 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~-~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~ 283 (319)
...+.+.+.+.....++... ...++..|..+++.++ .+.+++.++++++++.++.+.++...++|+.++++|+++
T Consensus 185 ~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~ 260 (292)
T PRK11272 185 MLAAGVVLLIASLLSGERLT----ALPTLSGFLALGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGL 260 (292)
T ss_pred HHHHHHHHHHHHHHcCCccc----ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHH
Confidence 67777766666544332111 0123456767777776 567899999999999999999999999999999999999
Q ss_pred cCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 284 FGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 284 ~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
+||++|+.+++|.++++.|+++.+.
T Consensus 261 l~E~~t~~~iiG~~lIi~gv~~~~~ 285 (292)
T PRK11272 261 GGETLSPIEWLALGVIVFAVVLVTL 285 (292)
T ss_pred cCCCCcHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999988773
No 12
>KOG1583|consensus
Probab=99.95 E-value=1.3e-27 Score=203.32 Aligned_cols=288 Identities=22% Similarity=0.272 Sum_probs=231.2
Q ss_pred hhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHHHHHHH
Q psy14104 11 KFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYASAAMTY 90 (319)
Q Consensus 11 ~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (319)
+-+...++++.+.+...+.-|.+.|+..|. ...++|.|+++-+.-..+.--.. ...++++|+|+|.......
T Consensus 3 ~a~~ai~~vf~GCcsnvv~lE~L~~~~pgs-------gNLITFaqFlFia~eGlif~skf-~~~k~kiplk~Y~i~V~mF 74 (330)
T KOG1583|consen 3 MAAAAISLVFGGCCSNVVFLELLVRNEPGS-------GNLITFAQFLFIATEGLIFTSKF-FTVKPKIPLKDYAITVAMF 74 (330)
T ss_pred hHHHHHHHHHHhhhchHHHHHHHHHhCCCC-------eeehHHHHHHHHHHhceeeeccc-cccCCCCchhhhheehhee
Confidence 345566778888888889999998776442 34689999988766655543111 1234889999999988888
Q ss_pred HHHHHHHHHHhcc-cchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecC-CCC--------C-
Q psy14104 91 LLAMVCSNMALQW-INYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDG-KAS--------K- 159 (319)
Q Consensus 91 ~~~~~~~~~sl~~-~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~-~~~--------~- 159 (319)
+..+.++|.++++ ++.|..+++|+.+++.+|++++++.|+|++.+|+.+++++.+|++++...+. +.. +
T Consensus 75 F~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~ 154 (330)
T KOG1583|consen 75 FIVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGS 154 (330)
T ss_pred eeeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCc
Confidence 8999999999999 9999999999999999999999999999999999999999999999886432 111 0
Q ss_pred --CCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhh-------
Q psy14104 160 --EESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVN------- 230 (319)
Q Consensus 160 --~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~------- 230 (319)
+...++..|+.++..+.+.+|..+++||...+|||-++.|.++|+...+.+..+ +..+|+.+.++...
T Consensus 155 ~~~~~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~kyGKh~~EalFytH~LsLP~Fl---f~~~div~~~~~~~~se~~~~ 231 (330)
T KOG1583|consen 155 AQSDFFWWLIGIALLVFALLLSAYMGIYQETTYQKYGKHWKEALFYTHFLSLPLFL---FMGDDIVSHWRLAFKSESYLI 231 (330)
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCChHHHHHHHHHhccchHH---HhcchHHHHHHHHhcCcceec
Confidence 112356789999999999999999999999999999999999999988776543 22334433332221
Q ss_pred -----hchHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHH
Q psy14104 231 -----KYPSIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFL 305 (319)
Q Consensus 231 -----~~~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~ 305 (319)
.-|..|.+++...+..+.+--..+..-.++++.+.+++-++|+.++.++|++.|++|+|+.+|+|.++++.|..+
T Consensus 232 p~~g~~vP~~~~yLl~n~L~Qy~CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~ 311 (330)
T KOG1583|consen 232 PLLGFKVPSMWVYLLFNVLTQYFCIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLL 311 (330)
T ss_pred cccCccccHHHHHHHHHHHHHHHHHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHH
Confidence 136677777776666666665667778999999999999999999999999999999999999999999999998
Q ss_pred HHhh
Q psy14104 306 DSFY 309 (319)
Q Consensus 306 ~~~~ 309 (319)
|+-.
T Consensus 312 fa~~ 315 (330)
T KOG1583|consen 312 FANV 315 (330)
T ss_pred HHHH
Confidence 8643
No 13
>KOG1443|consensus
Probab=99.95 E-value=3.4e-26 Score=197.57 Aligned_cols=283 Identities=19% Similarity=0.262 Sum_probs=228.3
Q ss_pred chhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCC---CCCchhhhHH-
Q psy14104 9 RLKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQG---EDSTRSVYYA- 84 (319)
Q Consensus 9 ~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~- 84 (319)
+...+..+.++|++.+.-.++|++.+ ..|++|++++.+|.++-.+++....+..+.+. +.+.+|++++
T Consensus 14 rV~~L~lVl~yY~~Si~Ltf~~~~~~--------~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr 85 (349)
T KOG1443|consen 14 RVLTLALVLLYYFLSIGLTFYFKWLT--------KNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLR 85 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhhh--------cCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHH
Confidence 34455566888888877777777664 45889999999999999999888776544322 2344566655
Q ss_pred ---HHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCC
Q psy14104 85 ---SAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEE 161 (319)
Q Consensus 85 ---~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~ 161 (319)
|.+++...+..++|.|++|++++.|++.|+++++|+.+++.++.-||++|.-...+.++.+|++++++++.+.
T Consensus 86 ~~aPtalata~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsTqf---- 161 (349)
T KOG1443|consen 86 RLAPTALATALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKSTQF---- 161 (349)
T ss_pred HhhhhhhhhhcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecccce----
Confidence 9999999999999999999999999999999999999999999999999999999999999999999987653
Q ss_pred CcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcC---CChhhHHHHhHHHHHHHHHHHHH-HhCchh----HHHHhhhhch
Q psy14104 162 STNFGFGEFLLILSLLMDGLTGAVQERMKSESQ---TKSGHMMVAMNKWSCLFLGISIL-ITGEIF----EFINFVNKYP 233 (319)
Q Consensus 162 ~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~----~~~~~~~~~~ 233 (319)
...|++++..|.++.++++.+.+.+.++.+ .+|..++++.+++..+.++|..+ ++|... +.+++. .+.
T Consensus 162 ---~i~Gf~lv~~aS~~sGlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~-d~~ 237 (349)
T KOG1443|consen 162 ---NIEGFFLVLAASLLSGLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQ-DTG 237 (349)
T ss_pred ---eehhHHHHHHHHHhhhhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhc-Ccc
Confidence 478999999999999999999998887643 47899999999988887777654 444321 122222 122
Q ss_pred HHHHHHHHHHHH---HHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 234 SIIYQLFLFSVL---SALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 234 ~~~~~i~~~~~~---~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
..+..+..++.+ +++.....+..+.+++..+.++++..|.+.+.++|..+.+|++|..+|.|..+++.|+.++.
T Consensus 238 ~~~rv~g~i~l~g~laF~l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 238 LILRVIGLISLGGLLAFLLEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 234443333333 44445567888999999999999999999999999999999999999999999999999983
No 14
>KOG1444|consensus
Probab=99.95 E-value=1.4e-25 Score=196.42 Aligned_cols=296 Identities=17% Similarity=0.127 Sum_probs=243.6
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHH--HhcCCCCCchhhhHH
Q psy14104 7 SKRLKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLT--FLKQGEDSTRSVYYA 84 (319)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~ 84 (319)
++..+-+..+++...+.++..+.||.+.. +++|+..+++...|.+.+.+..+...+. .+.++.++...|+++
T Consensus 8 ~~~~~~l~sa~~Y~~sS~lm~vvNK~vls------~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~ 81 (314)
T KOG1444|consen 8 KKQSSPLLSALFYCLSSILMTVVNKIVLS------SYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWF 81 (314)
T ss_pred hhhhhhhHHHHHHHHHHHHHHHHHHHHHh------cCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHc
Confidence 34455567788888888888898988872 3466666667779999888877665431 122445566788999
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcc
Q psy14104 85 SAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTN 164 (319)
Q Consensus 85 ~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~ 164 (319)
|+++++.+..+.+-.+++|+|+|+++++|..+|+.+++.+..++|+|+++..+.++..+.+|......+|.+.
T Consensus 82 P~~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~sf------- 154 (314)
T KOG1444|consen 82 PVSLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDLSF------- 154 (314)
T ss_pred cHHHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhcccccee-------
Confidence 9999999999999999999999999999999999999999999999999999999999999999887777542
Q ss_pred hhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhh---hhchHHHHHHHH
Q psy14104 165 FGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFV---NKYPSIIYQLFL 241 (319)
Q Consensus 165 ~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~ 241 (319)
+..|+.|+..+.+..+.+.++.|+..+..+.+.+++++|.++.+.+.+.....++||.. ...+. +.++..+..+.+
T Consensus 155 ~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~-~l~~~~~~~~~~~~~~~~~l 233 (314)
T KOG1444|consen 155 NLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELD-ALSLNFDNWSDSSVLVVMLL 233 (314)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchH-HHHhhcccccchhHHHHHHH
Confidence 25699999999999999999999887766778899999999999998888888888865 33332 223455666777
Q ss_pred HHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchhhhh
Q psy14104 242 FSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKESAK 316 (319)
Q Consensus 242 ~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~~~~ 316 (319)
.|+++..-.++.++|.+..||++.++++...+..+.+.+.+.+|++.++...+|+.+.+.|-..|++..++|||+
T Consensus 234 Scv~gf~isy~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~~~k~~ 308 (314)
T KOG1444|consen 234 SCVMGFGISYTSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATFRKKKQ 308 (314)
T ss_pred HHHHHHHHHHHHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhhhhccC
Confidence 788999999999999999999999999976777777777777788999999999999999999999655455444
No 15
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=99.94 E-value=3e-24 Score=194.74 Aligned_cols=251 Identities=12% Similarity=0.110 Sum_probs=183.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHHHHHHHH-HHHHHHHHHhcc-cchhHHHHhhhcchHHHHHHHH
Q psy14104 48 MLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYASAAMTYL-LAMVCSNMALQW-INYPTQVIGKSAKPIPVMLLGV 125 (319)
Q Consensus 48 p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~sl~~-~~~~~~~i~~~~~pi~v~l~~~ 125 (319)
|..+++.|+.++.+.+.... ++ ++.+++.....+++.. ....+.+.+++| .+.+.+.++.++.|++++++++
T Consensus 32 p~~~~~~R~~~a~~~l~~~~--~~----~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~ 105 (299)
T PRK11453 32 PLMLAGLRFMLVAFPAIFFV--AR----PKVPLNLLLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGA 105 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHh--cC----CCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHH
Confidence 89999999998776554432 11 2233444555555433 344567789988 6888999999999999999999
Q ss_pred HhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCC-ChhhHHHHh
Q psy14104 126 LLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQT-KSGHMMVAM 204 (319)
Q Consensus 126 l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~-~~~~~~~~~ 204 (319)
+++|||++++++++++++++|+.++..++.+. .+.+..|+.+++.++++++.+.+++|+..++.+. .......+.
T Consensus 106 ~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~----~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~ 181 (299)
T PRK11453 106 FTFGERLQGKQLAGIALAIFGVLVLIEDSLNG----QHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWS 181 (299)
T ss_pred HHhcCcCcHHHHHHHHHHHHhHHHhccccCCC----cchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHH
Confidence 99999999999999999999999887543211 1123579999999999999999999997654321 122223333
Q ss_pred HHHHHHHHHHHHH-HhCchhHHHHhhhhchHHHHHHHHHHH-HHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHH
Q psy14104 205 NKWSCLFLGISIL-ITGEIFEFINFVNKYPSIIYQLFLFSV-LSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSII 282 (319)
Q Consensus 205 ~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~-~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~ 282 (319)
...+.+...+... .+++.....+....++..|..+++.++ ++.+++.++++++++.+|.+++++..++|+++.++|++
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l 261 (299)
T PRK11453 182 ALIPIIPFFVASLILDGSATMIHSLVTIDMTTILSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAAL 261 (299)
T ss_pred HHHHHHHHHHHHHHhcCchhhhhhhccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3333322222212 222211001111234566777788876 67889999999999999999999999999999999999
Q ss_pred hcCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 283 FFGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 283 ~~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
++||++++.+++|.++++.|+++..+
T Consensus 262 ~lgE~~~~~~~iG~~lI~~gv~l~~~ 287 (299)
T PRK11453 262 LLDERLTGLQFLGAVLIMAGLYINVF 287 (299)
T ss_pred HhCCCccHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999988763
No 16
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.94 E-value=1.2e-24 Score=197.10 Aligned_cols=271 Identities=9% Similarity=0.078 Sum_probs=184.6
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCCC---CCchhhhH--H
Q psy14104 10 LKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQGE---DSTRSVYY--A 84 (319)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~--~ 84 (319)
.+-.+........+...+...+... + .+ |..+++.|..++.+++......+++.+. +.+++++. .
T Consensus 7 ~~g~~~~l~a~~~wg~~~~~~k~~~--~-------~~-~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (296)
T PRK15430 7 RQGVLLALAAYFIWGIAPAYFKLIY--Y-------VP-ADEILTHRVIWSFFFMVVLMSICRQWSYLKTLIQTPQKIFML 76 (296)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc--C-------CC-HHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHcCHHHHHHH
Confidence 3444444444445555566665442 1 22 8899999999998876655433221111 01122332 2
Q ss_pred HHH-HHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCc
Q psy14104 85 SAA-MTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEEST 163 (319)
Q Consensus 85 ~~~-~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~ 163 (319)
..+ +.......+.+.|++++|++.+.++.++.|+++++++.+++|||++++++.+++++++|+.++..++++
T Consensus 77 ~~~~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~~------- 149 (296)
T PRK15430 77 AVSAVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFGS------- 149 (296)
T ss_pred HHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcCC-------
Confidence 233 445667889999999999999999999999999999999999999999999999999999987643221
Q ss_pred chhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHH-HHHHHHH
Q psy14104 164 NFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSI-IYQLFLF 242 (319)
Q Consensus 164 ~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~-~~~i~~~ 242 (319)
.. .+.+.++++||++.+..|+..++...+......+..+.+.+...+. ..+.. .....++.. +..+...
T Consensus 150 ~~----~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~---~~~~~~~~~~~~~~~~~ 219 (296)
T PRK15430 150 LP----IIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSST---SHMGQNPMSLNLLLIAA 219 (296)
T ss_pred cc----HHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCc---ccccCCcHHHHHHHHHH
Confidence 11 3466688999999998888543211122222223333332222111 11100 001112222 2334444
Q ss_pred HHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 243 SVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 243 ~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
++.+.+++.++++++++.||.++++..+++|++++++|++++||++++.+++|+++++.|+.+..
T Consensus 220 g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~ 284 (296)
T PRK15430 220 GIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFV 284 (296)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHH
Confidence 56778999999999999999999999999999999999999999999999999999988876654
No 17
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.94 E-value=2.5e-24 Score=191.28 Aligned_cols=242 Identities=14% Similarity=0.094 Sum_probs=192.8
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHHHHHH-HHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHH
Q psy14104 46 TCMLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYASAAMT-YLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLG 124 (319)
Q Consensus 46 ~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~ 124 (319)
..|..+.+.|.+.+.+++.+..+. + +++.+++.+...+.+ ......+.+.|++|++.+...++.++.|+++++++
T Consensus 16 ~~~~~~~~~r~~~~~l~l~~~~~~-~---~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~ 91 (260)
T TIGR00950 16 VPLYFAVFRRLIFALLLLLPLLRR-R---PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLS 91 (260)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHh-c---cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHH
Confidence 347888899998888777665432 1 334445556666655 46777889999999999999999999999999999
Q ss_pred HHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHh
Q psy14104 125 VLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAM 204 (319)
Q Consensus 125 ~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 204 (319)
.+++|||++++++++++++++|+.++..++.. +.+..|+.+++.++++++.+.+..|+..++.+.++.....+.
T Consensus 92 ~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~~------~~~~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~ 165 (260)
T TIGR00950 92 DLMGKERPRKLVLLAAVLGLAGAVLLLSDGNL------SINPAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWV 165 (260)
T ss_pred HHHccCCCcHHHHHHHHHHHHhHHhhccCCcc------cccHHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHH
Confidence 99999999999999999999999997654311 124689999999999999999999998765444444444456
Q ss_pred HHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHH-HHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHh
Q psy14104 205 NKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSV-LSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIF 283 (319)
Q Consensus 205 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~-~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~ 283 (319)
..++.+++.|.....++.. ..++..|..+++.++ .+.+++.++++++++.++.+++...+++|+++.++|+++
T Consensus 166 ~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~ 239 (260)
T TIGR00950 166 LLLGALLLLPFAWFLGPNP------QALSLQWGALLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLI 239 (260)
T ss_pred HHHHHHHHHHHHHhcCCCC------CcchHHHHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHH
Confidence 7777777777765543321 113345555666665 467899999999999999999999999999999999999
Q ss_pred cCCCCchhhhhHHhHHHHhH
Q psy14104 284 FGNVMTSRQWIATFIVFTGL 303 (319)
Q Consensus 284 ~~e~~s~~~~iG~~li~~Gv 303 (319)
+||++++.+++|+++++.|+
T Consensus 240 ~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 240 LGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred hCCCCCHHHHHHHHHHHHhc
Confidence 99999999999999999986
No 18
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=99.94 E-value=7.1e-24 Score=191.73 Aligned_cols=277 Identities=10% Similarity=0.018 Sum_probs=200.2
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHHHHHH
Q psy14104 10 LKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYASAAMT 89 (319)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (319)
.+-......-...+...+...|.... +++ |..+++.|++++.+++.+..+.. +++.++++++.....+.+
T Consensus 11 ~~~~~~~~la~~~~~~~~~~~K~~~~--------~~~-~~~~~~~R~~~a~l~l~~~~~~~-~~~~~~~~~~~~~~~g~~ 80 (293)
T PRK10532 11 WLPILLLLIAMASIQSGASLAKSLFP--------LVG-APGVTALRLALGTLILIAIFKPW-RLRFAKEQRLPLLFYGVS 80 (293)
T ss_pred chHHHHHHHHHHHHHhhHHHHHHHHH--------HcC-HHHHHHHHHHHHHHHHHHHHhHH-hccCCHHHHHHHHHHHHH
Confidence 33333333333444445555665542 222 77899999999988887654322 222344556667778887
Q ss_pred HHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhhHH
Q psy14104 90 YLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGFGE 169 (319)
Q Consensus 90 ~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~ 169 (319)
......+.+.+++++|.+.++++.++.|+++++++ +||+++. ..+.++++|+.++..++.+.+ +.+..|+
T Consensus 81 ~~~~~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~~~--~~~~i~~~Gv~li~~~~~~~~----~~~~~G~ 150 (293)
T PRK10532 81 LGGMNYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPVDF--VWVVLAVLGLWFLLPLGQDVS----HVDLTGA 150 (293)
T ss_pred HHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChHHH--HHHHHHHHHHheeeecCCCcc----cCChHHH
Confidence 77778889999999999999999999999999876 3555544 456678899988764332211 1236799
Q ss_pred HHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHH-HHHH
Q psy14104 170 FLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSV-LSAL 248 (319)
Q Consensus 170 ~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~-~~~v 248 (319)
++.+.+++++|.+.+..|+..++ .++... .+...++.+.+.|.....+... ..++..|...+++++ ++.+
T Consensus 151 ll~l~aa~~~a~~~v~~r~~~~~--~~~~~~-~~~~~~~~~~l~~~~~~~~~~~------~~~~~~~~~~l~lgv~~t~~ 221 (293)
T PRK10532 151 ALALGAGACWAIYILSGQRAGAE--HGPATV-AIGSLIAALIFVPIGALQAGEA------LWHWSILPLGLAVAILSTAL 221 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--CCchHH-HHHHHHHHHHHHHHHHHccCcc------cCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998654 345554 4555666666666655432200 123344545556666 5778
Q ss_pred HHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchhhh
Q psy14104 249 GQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKESA 315 (319)
Q Consensus 249 ~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~~~ 315 (319)
++.++++++++.+|.++++..+++|++++++|++++||++++.+++|.+++++|++.+.++.+||.|
T Consensus 222 ~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~ 288 (293)
T PRK10532 222 PYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPK 288 (293)
T ss_pred HHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCC
Confidence 8889999999999999999999999999999999999999999999999999999999866555433
No 19
>KOG1442|consensus
Probab=99.92 E-value=2.9e-26 Score=194.90 Aligned_cols=305 Identities=13% Similarity=0.170 Sum_probs=251.2
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcC------CC---
Q psy14104 5 LSSKRLKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQ------GE--- 75 (319)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~------~~--- 75 (319)
++++..+....++-.|.+.+...++|+++...+ ....+.|.++++.||++...++....+...+. ++
T Consensus 22 l~~n~~~v~~~vs~ywv~SI~~vf~nk~llss~----~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~l 97 (347)
T KOG1442|consen 22 LEANAKQVDSAVSLYWVTSIGLVFLNKHLLSSL----VVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQL 97 (347)
T ss_pred HHHhhhchhhhccceeeeeehhhhhHHHHhhch----hhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccc
Confidence 445556666778888888888889999887443 57888999999999999988887655433221 11
Q ss_pred CCchhhhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecC
Q psy14104 76 DSTRSVYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDG 155 (319)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~ 155 (319)
+-...++.++.++.+.+...++|++|+|+++++|.+-|+...+|+.++++.++|+|-+.....++++++.|-.+-+-.|+
T Consensus 98 dl~t~r~vlplsvVfi~mI~fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvdqE~ 177 (347)
T KOG1442|consen 98 DLATARQVLPLSVVFILMISFNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVDQEG 177 (347)
T ss_pred cHHHHHhhcchhheeeeehhccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehheecccccc
Confidence 12235678899999999999999999999999999999999999999999999999999999999999998776442222
Q ss_pred CCCCCCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhh-chH
Q psy14104 156 KASKEESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNK-YPS 234 (319)
Q Consensus 156 ~~~~~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~ 234 (319)
. .+...+.|.++.+.|.++-|+-.++.||.....+..-+.+.+|+|..+.++.+|..++.||+.+.+.+.+. ...
T Consensus 178 ~----~~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~ 253 (347)
T KOG1442|consen 178 S----TGTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIK 253 (347)
T ss_pred c----cCccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHH
Confidence 1 12346899999999999999999999987766566789999999999999999999999998876665432 344
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchhh
Q psy14104 235 IIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKES 314 (319)
Q Consensus 235 ~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~~ 314 (319)
.|..+.+.|++++..++.-.+-+|.++|.|+++.++.|-+...++++.+++|.-+..-|.|-.++++|...|++.++.+.
T Consensus 254 Fw~~mtLsglfgF~mgyvTg~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em 333 (347)
T KOG1442|consen 254 FWILMTLSGLFGFAMGYVTGWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEM 333 (347)
T ss_pred HHHHHHHHHHHHHHhhheeeEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHH
Confidence 56666666778877777777889999999999999999999999999999999999999999999999999997666555
Q ss_pred hhh
Q psy14104 315 AKR 317 (319)
Q Consensus 315 ~~~ 317 (319)
|+.
T Consensus 334 ~~~ 336 (347)
T KOG1442|consen 334 RKA 336 (347)
T ss_pred Hhh
Confidence 543
No 20
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.90 E-value=8.5e-23 Score=169.03 Aligned_cols=294 Identities=15% Similarity=0.091 Sum_probs=226.4
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHHHHHHHHHHH
Q psy14104 15 YAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYASAAMTYLLAM 94 (319)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 94 (319)
.....+.+.++...-|+.+.. +.+|+-...+.+.|.+++.+.+.+.. +.+.-+.|....|.|.+++++.....
T Consensus 10 ~~lsYc~sSIlmTltNKyVls------~~gfnMnflll~vQSlvcvv~l~iLk-~l~~~~fR~t~aK~WfpiSfLLv~MI 82 (309)
T COG5070 10 ASLSYCFSSILMTLTNKYVLS------NLGFNMNFLLLAVQSLVCVVGLLILK-FLRLVEFRLTKAKKWFPISFLLVVMI 82 (309)
T ss_pred HHHHHHHHHHHHHHhhHheec------CCCCchhhHHHHHHHHHHHHHHHHHH-HHhHhheehhhhhhhcCHHHHHHHHH
Confidence 344455566666666777753 34677778899999999888876653 33333445667888999999999999
Q ss_pred HHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHH
Q psy14104 95 VCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLIL 174 (319)
Q Consensus 95 ~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~ 174 (319)
+..-.+++|+++|.++++|..+.+.+...+.+++|.|.+..+..+.++++..-+...++|.+.+.........|++|+..
T Consensus 83 yt~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~ 162 (309)
T COG5070 83 YTSSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFT 162 (309)
T ss_pred HhcccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEeh
Confidence 99999999999999999999999999999999999999999999999999999998888875432101123479999999
Q ss_pred HHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhh-hchHHHHHHHHHHHHHHHHHHHH
Q psy14104 175 SLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVN-KYPSIIYQLFLFSVLSALGQFFI 253 (319)
Q Consensus 175 s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~i~~~~~~~~v~~~~~ 253 (319)
.++..+.+....|+-.+--+...++.|+|.|+.+.+++..+.+...| ++.-+... ..++....+...|++++.-.++.
T Consensus 163 NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~ed-ws~~n~annl~~d~l~am~ISgl~svgiSy~s 241 (309)
T COG5070 163 NCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFED-WSPGNLANNLSVDSLMAMFISGLCSVGISYCS 241 (309)
T ss_pred hhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhcc-CCcchhhcCCChHHHHHHHHHHHHHhhhhhcc
Confidence 98888887766555443224456899999999999988777665544 22221111 23444445566677777667778
Q ss_pred HHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchhhhh
Q psy14104 254 FLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKESAK 316 (319)
Q Consensus 254 ~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~~~~ 316 (319)
.|+++.+++++.|+++.+.+....+.|.++||||.+...+..+.+-+..-.+|.+.+.+|+|+
T Consensus 242 aWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~ 304 (309)
T COG5070 242 AWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQN 304 (309)
T ss_pred ceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 899999999999999999999999999999999999999999999888778888544443443
No 21
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.89 E-value=5e-21 Score=172.17 Aligned_cols=262 Identities=9% Similarity=0.027 Sum_probs=176.7
Q ss_pred HHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHH--hc-CCCCCchhhhH-HHHHHHHHHHHH
Q psy14104 20 FTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTF--LK-QGEDSTRSVYY-ASAAMTYLLAMV 95 (319)
Q Consensus 20 ~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~--~~-~~~~~~~~~~~-~~~~~~~~~~~~ 95 (319)
-..+..+..+.++..+.+ .+ ..+.+.....+.+......+ ++ .+..+..++.. ...+........
T Consensus 10 a~~~a~~~~~~k~~~~~~---------~~--~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (281)
T TIGR03340 10 ALMHAGWNLMAKSHADKE---------PD--FLWWALLAHSVLLTPYGLWYLAQVGWSRLPATFWLLLAISAVANMVYFL 78 (281)
T ss_pred HHHHHHHHHHHhhcCCch---------hH--HHHHHHHHHHHHHHHHHHHhcccCCCCCcchhhHHHHHHHHHHHHHHHH
Confidence 344556667777564332 12 23455555555554433221 11 11122223333 334445677788
Q ss_pred HHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHHH
Q psy14104 96 CSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLILS 175 (319)
Q Consensus 96 ~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~s 175 (319)
+.+.++++.|.+....+.++.|+++.+++++++|||+++++++++++++.|+.+...++.+. .+..|+.+.+.+
T Consensus 79 ~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~~------~~~~g~~~~l~a 152 (281)
T TIGR03340 79 GLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFAQ------HRRKAYAWALAA 152 (281)
T ss_pred HHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhcccccc------cchhHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999876543221 124688888999
Q ss_pred HHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHH-HHHHHH---hCchhHHHHhhhhchHHHHHHHHH-HHHHHHHH
Q psy14104 176 LLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFL-GISILI---TGEIFEFINFVNKYPSIIYQLFLF-SVLSALGQ 250 (319)
Q Consensus 176 ~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~g~~~~~~~~~~~~~~~~~~i~~~-~~~~~v~~ 250 (319)
+++++.+.+..|+..++ .++.........++.+.. .|.... .++.. . ...+..+...++. ++++.+++
T Consensus 153 al~~a~~~i~~k~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~~~~~~~~~~~~~~s~l~~ 225 (281)
T TIGR03340 153 ALGTAIYSLSDKAAALG--VPAFYSALGYLGIGFLAMGWPFLLLYLKRHGRS----M-FPYARQILPSATLGGLMIGGAY 225 (281)
T ss_pred HHHHHHhhhhccccccc--hhcccccHHHHHHHHHHHHHHHHHHHHHHhccc----h-hhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999987765432 222211111122222222 232221 11100 0 0112223333344 45678899
Q ss_pred HHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHH
Q psy14104 251 FFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFL 305 (319)
Q Consensus 251 ~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~ 305 (319)
.++++++++.++.+.+...+++|++++++|++++||+++..+++|.++++.|+.+
T Consensus 226 ~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 226 ALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 9999999999999999999999999999999999999999999999999999865
No 22
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.85 E-value=3.8e-18 Score=153.27 Aligned_cols=247 Identities=17% Similarity=0.205 Sum_probs=179.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc-CCCCCchhhhHHH-HHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHH
Q psy14104 48 MLALVFVQCVINYIYAKIMLLTFLK-QGEDSTRSVYYAS-AAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGV 125 (319)
Q Consensus 48 p~~l~~~~~~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~ 125 (319)
+....+.|...+.+.........+. +++.+.+++.... .++.......+.+.++++++++.++++.++.|+++.+++.
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~ 115 (292)
T COG0697 36 FLFAAALRFLIAALLLLPLLLLEPRGLRPALRPWLLLLLLALLGLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAV 115 (292)
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHH
Confidence 4455566888777763322221111 1222222333444 4445667778899999999999999999999999999997
Q ss_pred -HhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHH-H
Q psy14104 126 -LLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMV-A 203 (319)
Q Consensus 126 -l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~-~ 203 (319)
+++|||++++++.+..+.+.|+.++..++.... +. ...|+.+.+.+.++++++.+..|+.. + .++..... +
T Consensus 116 ~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~---~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~--~~~~~~~~~~ 188 (292)
T COG0697 116 LLLLGERLSLLQILGILLALAGVLLILLGGGGGG---IL-SLLGLLLALAAALLWALYTALVKRLS-R--LGPVTLALLL 188 (292)
T ss_pred HHHccCCCcHHHHHHHHHHHHhHHheecCCCcch---hH-HHHHHHHHHHHHHHHHHHHHHHHHhc-C--CChHHHHHHH
Confidence 777999999999999999999999987664321 00 36899999999999999999998876 2 34445444 2
Q ss_pred hHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHH-HHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHH
Q psy14104 204 MNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLS-ALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSII 282 (319)
Q Consensus 204 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~-~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~ 282 (319)
..........+......+ .......|..+...++.+ .+++.++++++++.++...++...++|+.+++++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l 261 (292)
T COG0697 189 QLLLALLLLLLFFLSGFG-------APILSRAWLLLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVL 261 (292)
T ss_pred HHHHHHHHHHHHHhcccc-------ccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHH
Confidence 222111111121111100 112234455666666644 479999999999999999999999999999999999
Q ss_pred hcCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 283 FFGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 283 ~~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
++||+++..+++|+++++.|+.+...
T Consensus 262 ~~~e~~~~~~~~G~~li~~g~~l~~~ 287 (292)
T COG0697 262 LLGEPLSPAQLLGAALVVLGVLLASL 287 (292)
T ss_pred HhCCCCcHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999999999998873
No 23
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.84 E-value=1.9e-18 Score=153.40 Aligned_cols=238 Identities=8% Similarity=0.014 Sum_probs=162.0
Q ss_pred HHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCC--------CCCch-hhhHHHHH
Q psy14104 17 GGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQG--------EDSTR-SVYYASAA 87 (319)
Q Consensus 17 ~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~--------~~~~~-~~~~~~~~ 87 (319)
......+...+...+.+. ++ .|..+++.|++++.+++.+....+++++ .++.+ +......+
T Consensus 8 i~a~~~wg~~~~~~k~~~--~~--------~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 77 (256)
T TIGR00688 8 LLASFLFGYMYYYSKLLK--PL--------PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCG 77 (256)
T ss_pred HHHHHHHHHHHHHHHHhc--cC--------CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHH
Confidence 333344555566666532 12 2889999999999887665442222110 01111 11244566
Q ss_pred HHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhh
Q psy14104 88 MTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGF 167 (319)
Q Consensus 88 ~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~ 167 (319)
++......+.+.|+++++++.++++.++.|+++++++.+++|||++++++++++++++|+.+...++++ ..
T Consensus 78 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~~-------~~-- 148 (256)
T TIGR00688 78 LLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKGS-------LP-- 148 (256)
T ss_pred HHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcCC-------ch--
Confidence 666778889999999999999999999999999999999999999999999999999999987543211 11
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhch-HHHHHHHHHHHHH
Q psy14104 168 GEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYP-SIIYQLFLFSVLS 246 (319)
Q Consensus 168 G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~-~~~~~i~~~~~~~ 246 (319)
.+++.++++++.+.+..|+..++ +..+... ......+...+.....+... ..+.++ ..|..++..++++
T Consensus 149 --~~~l~aa~~~a~~~i~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~l~~~g~~t 218 (256)
T TIGR00688 149 --WEALVLAFSFTAYGLIRKALKNT---DLAGFCL-ETLSLMPVAIYYLLQTDFAT----VQQTNPFPIWLLLVLAGLIT 218 (256)
T ss_pred --HHHHHHHHHHHHHHHHHhhcCCC---CcchHHH-HHHHHHHHHHHHHHHhccCc----ccccCchhHHHHHHHHHHHH
Confidence 24567899999999998886532 2222221 12222222222221111110 001122 2566667777778
Q ss_pred HHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHh
Q psy14104 247 ALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIF 283 (319)
Q Consensus 247 ~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~ 283 (319)
.+++.++++++|+.+|.+.++..+++|++++++|.+.
T Consensus 219 ~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 219 GTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 8999999999999999999999999999999999764
No 24
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.81 E-value=4.6e-18 Score=148.89 Aligned_cols=218 Identities=17% Similarity=0.219 Sum_probs=173.2
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCC
Q psy14104 78 TRSVYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKA 157 (319)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~ 157 (319)
++..++.+.++++...+.+.+.+++++|++++++++.++.++|.+++++++|+|.+++||.++.+.++|+.+...++...
T Consensus 15 ~~~~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 15 KDTLKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 34567788999999999999999999999999999999999999999999999999999999999999999988655432
Q ss_pred CC---CC-------CcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhC-ch-hHH
Q psy14104 158 SK---EE-------STNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITG-EI-FEF 225 (319)
Q Consensus 158 ~~---~~-------~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~-~~~ 225 (319)
.. +. +.+...|+++++.+++++|+.+++.||+.|+.+.+.+........+|.++.++.....+ +. .+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~~~~~~~~~~~~~~ 174 (244)
T PF04142_consen 95 SDNSSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLLALLLSDGSAISES 174 (244)
T ss_pred cccccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHHHHhcccccccccC
Confidence 11 00 12357999999999999999999999999987777777777777888877766543321 11 110
Q ss_pred HHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHH
Q psy14104 226 INFVNKYPSIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIV 299 (319)
Q Consensus 226 ~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li 299 (319)
--+...++..|.. .+..+++.+.....+|+.|...-+....+..+++.++++++||.++|....+|..++
T Consensus 175 g~f~G~~~~~~~~----i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 175 GFFHGYSWWVWIV----IFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred CchhhcchHHHHH----HHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 0011112222222 234666777777889999999999999999999999999999999999999998764
No 25
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.79 E-value=2.1e-16 Score=142.52 Aligned_cols=236 Identities=14% Similarity=0.171 Sum_probs=170.0
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCchhhhHH----HHHHHHHHHHHHHHHHhcccchhHHHHhhh-cchHHHHHHHHHhcc
Q psy14104 55 QCVINYIYAKIMLLTFLKQGEDSTRSVYYA----SAAMTYLLAMVCSNMALQWINYPTQVIGKS-AKPIPVMLLGVLLGR 129 (319)
Q Consensus 55 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~-~~pi~v~l~~~l~~~ 129 (319)
+..++.++...+....++ +++ +.++.. .-+.....++.+.+.+.++++++.+..+-+ ..++++.+.+.+++|
T Consensus 33 ~~~~g~l~~~~~~~~~~~-~~~--~~~~~~~~g~l~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~ 109 (290)
T TIGR00776 33 GTTFGALILSIAIAIFVL-PEF--WALSIFLVGLLSGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFG 109 (290)
T ss_pred HHHHHHHHHHHHHHHHhC-Ccc--cccHHHHHHHHHHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhh
Confidence 565666655544333332 211 222332 333445677889999999999999988877 788899999999999
Q ss_pred cccchhh----HHHHHHHHHhhhheeeecCCCCCCCC-cchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHh
Q psy14104 130 KSYALKK----YFFVLLVVIGVALFIYKDGKASKEES-TNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAM 204 (319)
Q Consensus 130 ~~~~~~~----~~~~~l~~~Gv~l~~~~~~~~~~~~~-~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~ 204 (319)
||.++++ +++++++++|+++....+.+...+++ .+...|+++.++|.++++++....|+. +.+|.+..+.+
T Consensus 110 e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~----~~~~~~~~~~~ 185 (290)
T TIGR00776 110 EWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGIKSEFNFKKGILLLLMSTIGYLVYVVVAKAF----GVDGLSVLLPQ 185 (290)
T ss_pred hccchHHHHHHHHHHHHHHHhHheEEeccccccccccccchhhHHHHHHHHHHHHHHHHHHHHHc----CCCcceehhHH
Confidence 9999999 99999999999998765433211110 223679999999999999999988764 35677764433
Q ss_pred HH----HHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHH-HhCchHHHHHHhHHHHHHHHH
Q psy14104 205 NK----WSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSALGQFFIFLTVT-EYGPLPCSIVTTTRKFFTVLG 279 (319)
Q Consensus 205 ~~----~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~l~-~~~a~~~si~~~~~~v~~i~l 279 (319)
.. .+.++..+. . .. +. ..++.++..+..++...+++.+++.+.+ +.++.++++.++.+|+.+.++
T Consensus 186 ~~g~~~~~~~~~~~~-~-~~---~~-----~~~~~~~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~ 255 (290)
T TIGR00776 186 AIGMVIGGIIFNLGH-I-LA---KP-----LKKYAILLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLG 255 (290)
T ss_pred HHHHHHHHHHHHHHH-h-cc---cc-----hHHHHHHHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHH
Confidence 33 222222221 0 00 00 0122333334467777889999999999 999999999999999999999
Q ss_pred HHHhcCCCCchhhh----hHHhHHHHhHHHHH
Q psy14104 280 SIIFFGNVMTSRQW----IATFIVFTGLFLDS 307 (319)
Q Consensus 280 s~~~~~e~~s~~~~----iG~~li~~Gv~~~~ 307 (319)
|++++||+.++.|+ +|.++++.|+.+..
T Consensus 256 ~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 256 GILILGEKKTKREMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHhccCCCcceeehhHHHHHHHHHHHHHHh
Confidence 99999999999999 99999999998865
No 26
>KOG4510|consensus
Probab=99.77 E-value=4.5e-19 Score=150.82 Aligned_cols=254 Identities=12% Similarity=0.162 Sum_probs=191.7
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCch-hhhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHH
Q psy14104 48 MLALVFVQCVINYIYAKIMLLTFLKQGEDSTR-SVYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVL 126 (319)
Q Consensus 48 p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l 126 (319)
|..+...|+++-.+..+++....+..-..+.+ ++.+++.++..+.+..+.|+|++|.+.+-++++..++|++|.++++.
T Consensus 64 p~e~a~~r~l~~mlit~pcliy~~~~v~gp~g~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~ 143 (346)
T KOG4510|consen 64 PMELASFRLLVRMLITYPCLIYYMQPVIGPEGKRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWA 143 (346)
T ss_pred hhHhhhhhhhhehhhhheEEEEEeeeeecCCCcEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHH
Confidence 55555556544444443332111111111122 33456788888999999999999999999999999999999999999
Q ss_pred hcccccchhhHHHHHHHHHhhhheeeecCCC----CCC--CC-cchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhh
Q psy14104 127 LGRKSYALKKYFFVLLVVIGVALFIYKDGKA----SKE--ES-TNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGH 199 (319)
Q Consensus 127 ~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~----~~~--~~-~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~ 199 (319)
++|||+++.+.++..+.+.||++++.++--. .++ .. +.+..|-...+.+.+.-|...+..+++.|+ .+...
T Consensus 144 ~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~iGk~--~h~~m 221 (346)
T KOG4510|consen 144 FLKEPFTKFEALGSLITLLGVVLIVRPPFLFGDTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYIGKN--AHAIM 221 (346)
T ss_pred HHcCCCcHHHHHHHHHhhheEEEEecCCcccCCCccccccccccccCCchHHHHHhHhhhhhHHHHHHHhhcc--ccEEE
Confidence 9999999999999999999999998654211 111 01 234678888888888888888888888763 45556
Q ss_pred HHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHH
Q psy14104 200 MMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLG 279 (319)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~l 279 (319)
.+.|...++.+..++....-|+. +. .+....|+..+.+|+.+.++|++...++++-.|...++..+...+++.++
T Consensus 222 svsyf~~i~lV~s~I~~~~ig~~----~l-P~cgkdr~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~w 296 (346)
T KOG4510|consen 222 SVSYFSLITLVVSLIGCASIGAV----QL-PHCGKDRWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFW 296 (346)
T ss_pred EehHHHHHHHHHHHHHHhhccce----ec-CccccceEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHH
Confidence 66778888877776655433432 12 23344566667788999999999999999999999999999999999999
Q ss_pred HHHhcCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 280 SIIFFGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 280 s~~~~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
.+++|||.+|++.|.|+++++...+....
T Consensus 297 qv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~ 325 (346)
T KOG4510|consen 297 QVLFFGHWPTIWSWVGAVMVVSSTVWVAL 325 (346)
T ss_pred HHHHhcCCChHHHhhceeeeehhHHHHHH
Confidence 99999999999999999999998877653
No 27
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.76 E-value=1.9e-15 Score=131.17 Aligned_cols=253 Identities=15% Similarity=0.122 Sum_probs=179.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCC----CCCchhhh--HHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHH
Q psy14104 48 MLALVFVQCVINYIYAKIMLLTFLKQG----EDSTRSVY--YASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVM 121 (319)
Q Consensus 48 p~~l~~~~~~~~~l~~~~~~~~~~~~~----~~~~~~~~--~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~ 121 (319)
+..+..-|.+.+..+..+.+...|+.+ ..++|++. +...++.-..+.+..-+|.+.-..-.+++-....|++.+
T Consensus 34 ~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~V 113 (293)
T COG2962 34 ATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNV 113 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHH
Confidence 556777788888887776654433322 12223222 233333334444456677777667777888888999999
Q ss_pred HHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHH
Q psy14104 122 LLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMM 201 (319)
Q Consensus 122 l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~ 201 (319)
+++.+++|||+++.|+++++++.+||..-....++. .+..+.++ +.+++|....|++ +.++.+-.
T Consensus 114 llG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g~l-------pwval~la----~sf~~Ygl~RK~~----~v~a~~g~ 178 (293)
T COG2962 114 LLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLGSL-------PWVALALA----LSFGLYGLLRKKL----KVDALTGL 178 (293)
T ss_pred HHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcCCC-------cHHHHHHH----HHHHHHHHHHHhc----CCchHHhH
Confidence 999999999999999999999999999877655443 23444433 4577777765553 45555554
Q ss_pred HHhHHHHHHHHHHHHHHhCchhHHHHhhh-hchHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHH
Q psy14104 202 VAMNKWSCLFLGISILITGEIFEFINFVN-KYPSIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGS 280 (319)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls 280 (319)
+.-..+-.+..+...+..++-.+ +.. .++..+..++..|..+++.-.++..+-|+.+=.+.++..+++|....+++
T Consensus 179 ~lE~l~l~p~al~yl~~l~~~~~---~~~~~~~~~~~LLv~aG~vTavpL~lf~~aa~~lpls~~G~lqYi~Ptl~flla 255 (293)
T COG2962 179 TLETLLLLPVALIYLLFLADSGQ---FLQQNANSLWLLLVLAGLVTAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLA 255 (293)
T ss_pred HHHHHHHhHHHHHHHHHHhcCch---hhhcCCchHHHHHHHhhHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 44444444444444433322111 122 35566777777788899999999999999999999999999999999999
Q ss_pred HHhcCCCCchhhhhHHhHHHHhHHHHHhhcchhhhhhc
Q psy14104 281 IIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKESAKRR 318 (319)
Q Consensus 281 ~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~~~~~~ 318 (319)
++++||+++..+....+++-.|+.+++.-+-+++||+|
T Consensus 256 v~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~~r~~~ 293 (293)
T COG2962 256 VLIFGEPFDSDQLVTFAFIWLALALFSIDGLYTARKKR 293 (293)
T ss_pred HHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Confidence 99999999999999999999999999965554444443
No 28
>KOG2234|consensus
Probab=99.75 E-value=2.1e-15 Score=134.42 Aligned_cols=266 Identities=20% Similarity=0.276 Sum_probs=196.9
Q ss_pred CccccchhHHHHHHHHHHHHHHHHHHHHHh----cCCCC---------CchhhhHHHHHHHHHHHHHHHHHHhcccchhH
Q psy14104 42 NEKFTCMLALVFVQCVINYIYAKIMLLTFL----KQGED---------STRSVYYASAAMTYLLAMVCSNMALQWINYPT 108 (319)
Q Consensus 42 ~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~----~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~ 108 (319)
+.+|- |.+.+++--++..+++........ ++..+ +.+..+..+.+++|...+.+.+.++.++|+++
T Consensus 42 ~~~f~-~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~iYalqNnl~yval~~ldaat 120 (345)
T KOG2234|consen 42 KPMFL-PTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALIYALQNNLQYVALSNLDAAT 120 (345)
T ss_pred CCCcc-hhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHHHHHhhhHHHHHHhcCCchh
Confidence 34554 556666666666666655442221 11111 11234467788899999999999999999999
Q ss_pred HHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCC---CC-CCCCcchhhHHHHHHHHHHHHhhhHH
Q psy14104 109 QVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGK---AS-KEESTNFGFGEFLLILSLLMDGLTGA 184 (319)
Q Consensus 109 ~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~---~~-~~~~~~~~~G~~l~~~s~~~~a~~~~ 184 (319)
+++....+...|.++..++++||.+++||.++++.+.|+.+.-.+..+ .. ...+.+...|+..++.+++.+++.++
T Consensus 121 yqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a~~~~~~~n~~~G~~avl~~c~~SgfAgv 200 (345)
T KOG2234|consen 121 YQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGAKSESSAQNPFLGLVAVLVACFLSGFAGV 200 (345)
T ss_pred hhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCccCCCcccchhhhHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999998733221 11 11233568999999999999999999
Q ss_pred HHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHh-CchhHHHHhhh-hchHHHHHHHHHHHHHHHHHHHHHHHHHHhCc
Q psy14104 185 VQERMKSESQTKSGHMMVAMNKWSCLFLGISILIT-GEIFEFINFVN-KYPSIIYQLFLFSVLSALGQFFIFLTVTEYGP 262 (319)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-g~~~~~~~~~~-~~~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a 262 (319)
+.||++|+.+.+.+-.......+|.++.+...+.+ ++-.....+.+ .+...|..++ ..+++.++....+|+.|.
T Consensus 201 YfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~gff~G~s~~vw~vVl----~~a~gGLlvs~v~KyADn 276 (345)
T KOG2234|consen 201 YFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYGFFYGYSSIVWLVVL----LNAVGGLLVSLVMKYADN 276 (345)
T ss_pred HHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCCccccccHHHHHHHH----HHhccchhHHHHHHHhHH
Confidence 99999987677766666667777777766655433 22111011111 1222333333 355666677778999999
Q ss_pred hHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcch
Q psy14104 263 LPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSK 312 (319)
Q Consensus 263 ~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~ 312 (319)
..-.....+-.+++.+.|+.++|.++|..-.+|+.+++.++.+|..+.++
T Consensus 277 IlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~P~~ 326 (345)
T KOG2234|consen 277 ILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLYPAR 326 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcCCcc
Confidence 99999999999999999999999999999999999999999999955444
No 29
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.73 E-value=5.5e-15 Score=125.22 Aligned_cols=242 Identities=14% Similarity=0.105 Sum_probs=187.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHh
Q psy14104 48 MLALVFVQCVINYIYAKIMLLTFLKQGEDSTRSVYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLL 127 (319)
Q Consensus 48 p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~ 127 (319)
|...+..|..++.+++....|-++ ++..+.+++.....|.+....+.++|.|++.+|.+.+..+-.+.|+.+.+++.
T Consensus 40 ~~g~t~lRl~~aaLIll~l~RPwr-~r~~~~~~~~~~~yGvsLg~MNl~FY~si~riPlGiAVAiEF~GPL~vA~~~s-- 116 (292)
T COG5006 40 AAGVTALRLAIAALILLALFRPWR-RRLSKPQRLALLAYGVSLGGMNLLFYLSIERIPLGIAVAIEFTGPLAVALLSS-- 116 (292)
T ss_pred hhhHHHHHHHHHHHHHHHHhhHHH-hccChhhhHHHHHHHHHHHHHHHHHHHHHHhccchhhhhhhhccHHHHHHHhc--
Confidence 677899999999988877765443 34456678888889999899999999999999999999999999999887653
Q ss_pred cccccchhhHHHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHH
Q psy14104 128 GRKSYALKKYFFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKW 207 (319)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (319)
+| .++.+-+.+++.|+.+..-.+.+. +..+..|..+.+.+..+|+.|-+..||.-+. .+.-.-+..-..+
T Consensus 117 --Rr--~~d~vwvaLAvlGi~lL~p~~~~~----~~lDp~Gv~~Al~AG~~Wa~YIv~G~r~g~~--~~g~~g~a~gm~v 186 (292)
T COG5006 117 --RR--LRDFVWVALAVLGIWLLLPLGQSV----WSLDPVGVALALGAGACWALYIVLGQRAGRA--EHGTAGVAVGMLV 186 (292)
T ss_pred --cc--hhhHHHHHHHHHHHHhheeccCCc----CcCCHHHHHHHHHHhHHHHHHHHHcchhccc--CCCchHHHHHHHH
Confidence 33 345556677888888765332111 1134799999999999999999998887642 2334445556667
Q ss_pred HHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHH-HHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCC
Q psy14104 208 SCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSV-LSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGN 286 (319)
Q Consensus 208 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~-~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e 286 (319)
+.++.+|+...+.+. .+ .+|.....-+..++ .+++.+.+-..++++.++.+.++...+||.++.+.|++++||
T Consensus 187 Aaviv~Pig~~~ag~----~l--~~p~ll~laLgvavlSSalPYsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e 260 (292)
T COG5006 187 AALIVLPIGAAQAGP----AL--FSPSLLPLALGVAVLSSALPYSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGE 260 (292)
T ss_pred HHHHHhhhhhhhcch----hh--cChHHHHHHHHHHHHhcccchHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcC
Confidence 777777876543221 11 24555555556666 467889899999999999999999999999999999999999
Q ss_pred CCchhhhhHHhHHHHhHHHHHh
Q psy14104 287 VMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 287 ~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
.+|+.||+|++.++.+..-.++
T Consensus 261 ~ls~~qwlaI~~ViaAsaG~~l 282 (292)
T COG5006 261 TLTLIQWLAIAAVIAASAGSTL 282 (292)
T ss_pred CCCHHHHHHHHHHHHHHhcccc
Confidence 9999999999999999887764
No 30
>KOG3912|consensus
Probab=99.73 E-value=1.4e-15 Score=130.39 Aligned_cols=224 Identities=13% Similarity=0.165 Sum_probs=177.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCC--
Q psy14104 82 YYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASK-- 159 (319)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~-- 159 (319)
.+++.++|...+..+.|.++.+++++.++++|.+..+||.+++.-+++++++.+||+++..+.+|++++...|.+...
T Consensus 88 lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~~p 167 (372)
T KOG3912|consen 88 LFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVTDP 167 (372)
T ss_pred eecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeecccccCC
Confidence 356799999999999999999999999999999999999999999999999999999999999999999887654322
Q ss_pred CCC-cchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHH-----hCc---------hh-
Q psy14104 160 EES-TNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILI-----TGE---------IF- 223 (319)
Q Consensus 160 ~~~-~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~---------~~- 223 (319)
..| .+-..|+++.+++-..-|...+++||..++++++|.+..-|...+|..+.....+. .++ +.
T Consensus 168 ~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~~sfS~~~~g~~eD 247 (372)
T KOG3912|consen 168 YTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSGDSFSCNPRGVLED 247 (372)
T ss_pred ccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheecCCcCcCCCCcchhh
Confidence 111 23578999999999999999999999999999999999999999996554333221 121 11
Q ss_pred --HHHHhhhhchHHHHHHHHHHHHH--HHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHH
Q psy14104 224 --EFINFVNKYPSIIYQLFLFSVLS--ALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIV 299 (319)
Q Consensus 224 --~~~~~~~~~~~~~~~i~~~~~~~--~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li 299 (319)
+.+.-.+..|.. .+.+.+... +.-++.-.+..|..++++-.+.-.+|..+..+++.....|.+...|+.|.++.
T Consensus 248 ~~~~~~~~~e~p~l--~val~~~~vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~~E~f~llqilGFliL 325 (372)
T KOG3912|consen 248 WGDAFAALQESPSL--AVALIGFTVSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMGWEYFHLLQILGFLIL 325 (372)
T ss_pred HHHHHHHhcCCchh--HHHHhhhhhheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHHHHHHHHHHHHHHHHH
Confidence 111122223321 222222221 22334445678999999999999999999999999999999999999999999
Q ss_pred HHhHHHHH
Q psy14104 300 FTGLFLDS 307 (319)
Q Consensus 300 ~~Gv~~~~ 307 (319)
+.|+++|+
T Consensus 326 i~Gi~lY~ 333 (372)
T KOG3912|consen 326 IMGIILYN 333 (372)
T ss_pred HHHHHHHH
Confidence 99999986
No 31
>KOG2765|consensus
Probab=99.73 E-value=4.8e-17 Score=144.77 Aligned_cols=225 Identities=15% Similarity=0.206 Sum_probs=175.6
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCC-CCCcc
Q psy14104 86 AAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASK-EESTN 164 (319)
Q Consensus 86 ~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~-~~~~~ 164 (319)
...+.+.+++..|.||++++++..+++-+++-.||..++.++..||+++.|.+++.+.+.|++++...|.+..+ ....+
T Consensus 165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~ 244 (416)
T KOG2765|consen 165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASR 244 (416)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccc
Confidence 33345788899999999999999999999999999999999999999999999999999999999987653221 11234
Q ss_pred hhhHHHHHHHHHHHHhhhHHHHHHHHhhc--CCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHH
Q psy14104 165 FGFGEFLLILSLLMDGLTGAVQERMKSES--QTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLF 242 (319)
Q Consensus 165 ~~~G~~l~~~s~~~~a~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~ 242 (319)
...|.+++++|++.||.|.+..|+-..+. +++.....-|..++..+++.|..++-.-. ....+.-.+......++..
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~-~~e~F~lP~~~q~~~vv~~ 323 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFF-GEERFELPSSTQFSLVVFN 323 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHh-ccCcccCCCCceeEeeeHh
Confidence 68999999999999999999988765544 45555555567777777777665432110 0001111111122233444
Q ss_pred HH-HHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcc
Q psy14104 243 SV-LSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSS 311 (319)
Q Consensus 243 ~~-~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~ 311 (319)
++ .+++.-++|.++.-.++|+++.+..++....+++.+.++-|+++|+.+++|...+++|.+..++.+.
T Consensus 324 ~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~~ 393 (416)
T KOG2765|consen 324 NLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISSE 393 (416)
T ss_pred hHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheecccc
Confidence 44 5678899999999999999999999999999999999999999999999999999999998886543
No 32
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.71 E-value=5e-16 Score=126.83 Aligned_cols=141 Identities=22% Similarity=0.311 Sum_probs=119.9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhh-----cCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhh--hh-----chHH
Q psy14104 168 GEFLLILSLLMDGLTGAVQERMKSE-----SQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFV--NK-----YPSI 235 (319)
Q Consensus 168 G~~l~~~s~~~~a~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~--~~-----~~~~ 235 (319)
|+++++.|.++.|++.++.|+..++ .+.++.++++|.++.+.++++|..+..++........ .. .+..
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 7788999999999999999998877 5789999999999999999999877655432111111 11 3355
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 236 IYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 236 ~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
+..++..++.+...++..+.+++++||+++++++++|.+..++.|+++|||++|+.+++|+++.+.|+..|+|
T Consensus 81 ~~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 5666667778889999999999999999999999999999999999999999999999999999999999874
No 33
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=99.69 E-value=4.7e-16 Score=135.10 Aligned_cols=195 Identities=19% Similarity=0.238 Sum_probs=142.5
Q ss_pred cchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCC-----------------CC---CCCc
Q psy14104 104 INYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKA-----------------SK---EEST 163 (319)
Q Consensus 104 ~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~-----------------~~---~~~~ 163 (319)
+++|.++.+|+.+|+++++.+....++|++..|+++.+++..|+......|.+. .. ....
T Consensus 2 isvPa~~~~~s~~l~~v~l~~~~~~~~~~~~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g 81 (222)
T TIGR00803 2 LSVPIHIIFKQNNLVLIALGNLLAAGKQVTQLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFG 81 (222)
T ss_pred ccccchHHHHhcchHHHHHhcccccceeeehHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCccccccc
Confidence 578999999999999999999999999999999999999999988644433211 00 0112
Q ss_pred chhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhC------chhHHHHhhhhchHHHH
Q psy14104 164 NFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITG------EIFEFINFVNKYPSIIY 237 (319)
Q Consensus 164 ~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g------~~~~~~~~~~~~~~~~~ 237 (319)
+...|..+.+.+..++++.++++|+..|+++.+ +|.+.++..+..+.....+ +......+....|...+
T Consensus 82 ~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~-----~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (222)
T TIGR00803 82 NPVVGLSAVLSALLSSGFAGVYFEKILKDGDTM-----FWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGFFIGYPTAVW 156 (222)
T ss_pred cHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCc-----hHHHHHHHHHHHHHHHHHHHhhcccchhhccCcccCCchHHH
Confidence 457888889999999999999999987654332 4444444433222211111 11111111112233222
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHH
Q psy14104 238 QLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLD 306 (319)
Q Consensus 238 ~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~ 306 (319)
. ..+..++++.+..+.+|+.|+.+.++++++|++.+.++|+++|||+++..+++|+.+++.|+++|
T Consensus 157 ~---~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~lY 222 (222)
T TIGR00803 157 I---VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFLY 222 (222)
T ss_pred H---HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEeC
Confidence 2 23457778888999999999999999999999999999999999999999999999999998765
No 34
>KOG2766|consensus
Probab=99.56 E-value=3.9e-16 Score=132.20 Aligned_cols=227 Identities=16% Similarity=0.156 Sum_probs=178.2
Q ss_pred CCCCchhhhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeee
Q psy14104 74 GEDSTRSVYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYK 153 (319)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~ 153 (319)
+.-+..|++|++.++..+-++++-..|.||++....+++.+-..+.+++++++++|.|+++.|+.+++++..|+.++...
T Consensus 72 ~~~~~~~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~s 151 (336)
T KOG2766|consen 72 KYIKAKWRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFS 151 (336)
T ss_pred HHHHHHHHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEe
Confidence 44556788899999988888888889999999999999999999999999999999999999999999999999999988
Q ss_pred cCCCCC-CCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhc
Q psy14104 154 DGKASK-EESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKY 232 (319)
Q Consensus 154 ~~~~~~-~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~ 232 (319)
|.+... +...+...|+++++.++-+||.-++.+|.+.| +.+..+.+....++|+++..+-.+.+- .... ..+.+
T Consensus 152 DV~agd~aggsnp~~GD~lvi~GATlYaVSNv~EEflvk--n~d~~elm~~lgLfGaIIsaIQ~i~~~--~~~~-tl~w~ 226 (336)
T KOG2766|consen 152 DVHAGDRAGGSNPVKGDFLVIAGATLYAVSNVSEEFLVK--NADRVELMGFLGLFGAIISAIQFIFER--HHVS-TLHWD 226 (336)
T ss_pred eeccccccCCCCCccCcEEEEecceeeeeccccHHHHHh--cCcHHHHHHHHHHHHHHHHHHHHhhhc--ccee-eEeeh
Confidence 865421 11234578999999999999999999999987 568899999999999998876543321 1100 01111
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 233 PSIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 233 ~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
.....++. .+++.++-+.+.-..+|..|++..++........++++ ..||-+.+|...+..+.+..|.++|..
T Consensus 227 ~~i~~yl~-f~L~MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~ 299 (336)
T KOG2766|consen 227 SAIFLYLR-FALTMFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYST 299 (336)
T ss_pred HHHHHHHH-HHHHHHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeec
Confidence 11111111 23333433444445689999999998888889999998 678888999999999999999999974
No 35
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.22 E-value=6.4e-11 Score=90.42 Aligned_cols=134 Identities=22% Similarity=0.238 Sum_probs=109.0
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHHH
Q psy14104 169 EFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSAL 248 (319)
Q Consensus 169 ~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v 248 (319)
.+++++|++++++..++.|.-.+ +.+|.-.++--+....+++......+|..... ...++..|.++++.|+.+..
T Consensus 5 ~~~ALLsA~fa~L~~iF~KIGl~--~vdp~~At~IRtiVi~~~l~~v~~~~g~~~~~---~~~~~k~~lflilSGla~gl 79 (140)
T COG2510 5 IIYALLSALFAGLTPIFAKIGLE--GVDPDFATTIRTIVILIFLLIVLLVTGNWQAG---GEIGPKSWLFLILSGLAGGL 79 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--ccCccHHHHHHHHHHHHHHHHHHHhcCceecc---cccCcceehhhhHHHHHHHH
Confidence 45778899999999998877555 56676666666766666666666666643211 01256778888888988999
Q ss_pred HHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 249 GQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 249 ~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
+-+++|+++|.-.+.....+.-..+++++++|++++||++|..+|+|++++..|.++.+
T Consensus 80 swl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 80 SWLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999999999999999999987654
No 36
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.18 E-value=2.5e-10 Score=89.22 Aligned_cols=123 Identities=20% Similarity=0.231 Sum_probs=98.3
Q ss_pred HHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHH-HHHHHHHHHHH
Q psy14104 178 MDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVL-SALGQFFIFLT 256 (319)
Q Consensus 178 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~-~~v~~~~~~~~ 256 (319)
+||.+.+..|+..++ .++....++....+.+ ..+......... ....++..+......++. +.+++.+++++
T Consensus 2 ~~a~~~~~~k~~~~~--~~~~~~~~~~~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 74 (126)
T PF00892_consen 2 SWAIYSVFSKKLLKK--ISPLSITFWRFLIAGI-LLILLLILGRKP----FKNLSPRQWLWLLFLGLLGTALAYLLYFYA 74 (126)
T ss_pred eeeeHHHHHHHHhcc--CCHHHHHHHHHHHHHH-HHHHHHhhcccc----ccCCChhhhhhhhHhhccceehHHHHHHHH
Confidence 578888889988874 6899999999998887 555544332211 112234445555666654 68899999999
Q ss_pred HHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 257 VTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 257 l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
+++.++...++...++|+.+.+++++++||++++.+++|+.+++.|+++.+
T Consensus 75 ~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 75 LKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred HHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999998764
No 37
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.03 E-value=1.3e-07 Score=83.10 Aligned_cols=212 Identities=15% Similarity=0.207 Sum_probs=151.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcccchhHHH-HhhhcchHHHHHHHHHhcccccchhhHH----HHHHHHHhhhheeeecC
Q psy14104 81 VYYASAAMTYLLAMVCSNMALQWINYPTQV-IGKSAKPIPVMLLGVLLGRKSYALKKYF----FVLLVVIGVALFIYKDG 155 (319)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~-i~~~~~pi~v~l~~~l~~~~~~~~~~~~----~~~l~~~Gv~l~~~~~~ 155 (319)
..-++-+++...+...++.|++++.+|.+. +-.....+.+.+.+.++++|.-+..+++ +++++++|+.+....|.
T Consensus 46 ~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~ 125 (269)
T PF06800_consen 46 IVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDK 125 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccc
Confidence 334556677889999999999998877554 2334567778899999999988877755 88888899999988776
Q ss_pred CCCC-CCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHH-HHHHhCchhHHHHhhhhch
Q psy14104 156 KASK-EESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGI-SILITGEIFEFINFVNKYP 233 (319)
Q Consensus 156 ~~~~-~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~ 233 (319)
+... +++.+..-|+..++.+.+.|..|....+. .+.++++..+ ...++..+... +.....+. ..+.
T Consensus 126 ~~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~----~~~~~~~~~l-PqaiGm~i~a~i~~~~~~~~-------~~~k 193 (269)
T PF06800_consen 126 KSDKSSSKSNMKKGILALLISTIGYWIYSVIPKA----FHVSGWSAFL-PQAIGMLIGAFIFNLFSKKP-------FFEK 193 (269)
T ss_pred cccccccccchhhHHHHHHHHHHHHHHHHHHHHh----cCCChhHhHH-HHHHHHHHHHHHHhhccccc-------cccc
Confidence 4332 11234567999999999999998887544 2567777655 44445444322 22221110 0122
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchh----hhhHHhHHHHhHHH
Q psy14104 234 SIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSR----QWIATFIVFTGLFL 305 (319)
Q Consensus 234 ~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~----~~iG~~li~~Gv~~ 305 (319)
..|.. +.-|+.=.+++++++.+.++.|..+.=..+.+..+++.+.|.+++||+=+.. .++|.++++.|.++
T Consensus 194 ~~~~n-il~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 194 KSWKN-ILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred chHHh-hHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 23333 3445666788999999999999999999999999999999999999987755 55788888777653
No 38
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.02 E-value=1.3e-09 Score=85.12 Aligned_cols=118 Identities=19% Similarity=0.314 Sum_probs=90.9
Q ss_pred HHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcC---CCCCchhhhHHHHHHH-HHHHHHHHH
Q psy14104 23 YFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQ---GEDSTRSVYYASAAMT-YLLAMVCSN 98 (319)
Q Consensus 23 ~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~~~-~~~~~~~~~ 98 (319)
+..+.+++++..++ + .|...++.|+..+.+ ..+.....+++ +.++..+......+.+ ...+..+.+
T Consensus 3 ~a~~~~~~k~~~~~--------~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 72 (126)
T PF00892_consen 3 WAIYSVFSKKLLKK--------I-SPLSITFWRFLIAGI-LLILLLILGRKPFKNLSPRQWLWLLFLGLLGTALAYLLYF 72 (126)
T ss_pred eeeHHHHHHHHhcc--------C-CHHHHHHHHHHHHHH-HHHHHHhhccccccCCChhhhhhhhHhhccceehHHHHHH
Confidence 34566777877643 2 278899999999987 44433222222 2222334445556665 578888999
Q ss_pred HHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhhe
Q psy14104 99 MALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALF 150 (319)
Q Consensus 99 ~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~ 150 (319)
.++++++++..+++.++.|+++.+++++++||++++++++++++++.|+.++
T Consensus 73 ~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 73 YALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred HHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999875
No 39
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.97 E-value=4.5e-08 Score=88.75 Aligned_cols=139 Identities=17% Similarity=0.274 Sum_probs=107.1
Q ss_pred hhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHH
Q psy14104 165 FGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSV 244 (319)
Q Consensus 165 ~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 244 (319)
...|.++.+.+.++|+...+..|.. . +.+|.+..++...++.+++.+.....++..+.... ..++..+......++
T Consensus 6 ~~~g~~~~l~a~~~wg~~~~~~k~~-~--~~~~~~~~~~R~~~a~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 81 (296)
T PRK15430 6 TRQGVLLALAAYFIWGIAPAYFKLI-Y--YVPADEILTHRVIWSFFFMVVLMSICRQWSYLKTL-IQTPQKIFMLAVSAV 81 (296)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHh-c--CCCHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHH-HcCHHHHHHHHHHHH
Confidence 4689999999999999999988654 3 57899999999999988777665443332111110 112232222222233
Q ss_pred HHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 245 LSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 245 ~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
.....+.++++++++.++..+++..+..|+++.++++++++|+++..+|+|+++.+.|+.+..
T Consensus 82 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~ 144 (296)
T PRK15430 82 LIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQL 144 (296)
T ss_pred HHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHH
Confidence 456678889999999999999999999999999999999999999999999999999998754
No 40
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.97 E-value=3.8e-09 Score=81.71 Aligned_cols=102 Identities=20% Similarity=0.246 Sum_probs=78.5
Q ss_pred HHHHHHHHHHHHHHHHHhcC-----CCCCchhhhHHHHHHHHH-HHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHh
Q psy14104 54 VQCVINYIYAKIMLLTFLKQ-----GEDSTRSVYYASAAMTYL-LAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLL 127 (319)
Q Consensus 54 ~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~ 127 (319)
+|...+.++...+....++. ..+++++......+++.. .+..+.+.|+++.+ +....+.++.|+++++++.++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHHH
Confidence 56666666666554332221 112344445555666654 77889999999999 577899999999999999999
Q ss_pred cccccchhhHHHHHHHHHhhhheeeecCC
Q psy14104 128 GRKSYALKKYFFVLLVVIGVALFIYKDGK 156 (319)
Q Consensus 128 ~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~ 156 (319)
+|||++++++.+++++++|+++...+|.+
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999887653
No 41
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=98.93 E-value=6.8e-08 Score=85.64 Aligned_cols=138 Identities=15% Similarity=0.198 Sum_probs=106.2
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHH-HHhhhhch-HHHHHHHHHHH
Q psy14104 167 FGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEF-INFVNKYP-SIIYQLFLFSV 244 (319)
Q Consensus 167 ~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~-~~~~~i~~~~~ 244 (319)
.|..++++++++|+...+..|.+ . +.+|.++.++-..++.+++.+.....++..+. .+...... +.+..+...++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~~-~--~~~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 78 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKLL-K--PLPATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGL 78 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHh-c--cCCHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHH
Confidence 38888999999999999998873 3 47999999999999988776665443321111 01100111 12233444555
Q ss_pred HHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 245 LSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 245 ~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
.....+.++++++++.++.++++..+..|+++.+++.++++|+++..+++|+++.+.|+.+..
T Consensus 79 ~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~ 141 (256)
T TIGR00688 79 LIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNI 141 (256)
T ss_pred HHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHH
Confidence 667788899999999999999999999999999999999999999999999999999987653
No 42
>KOG4314|consensus
Probab=98.77 E-value=2.6e-08 Score=82.00 Aligned_cols=214 Identities=17% Similarity=0.096 Sum_probs=156.9
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCC
Q psy14104 82 YYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEE 161 (319)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~ 161 (319)
+-.+.+++..+.++....+++.++++.++-+.+|.--++-+++++.+|+|+...+++++++++.|+++..+.|.+.
T Consensus 55 ~taPF~i~Wt~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~---- 130 (290)
T KOG4314|consen 55 RTAPFSIFWTGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH---- 130 (290)
T ss_pred eecceEEEEecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh----
Confidence 3456677778889999999999999999999999999999999999999999999999999999999999877532
Q ss_pred CcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHH----HHHHHHH--HhC-chhHHHHhhhhchH
Q psy14104 162 STNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCL----FLGISIL--ITG-EIFEFINFVNKYPS 234 (319)
Q Consensus 162 ~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~g-~~~~~~~~~~~~~~ 234 (319)
.+.+.|+.+++.|+...|+|-+..|....+- +--+...+++..+.. ...|..+ +++ |-++. + ...
T Consensus 131 -a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnA--n~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~VE~~qs--F---A~~ 202 (290)
T KOG4314|consen 131 -ADEIIGIACAVGSAFMAALYKVLFKMFIGNA--NFGDAAHFMSCLGFFNLCFISFPALILAFTGVEHLQS--F---AAA 202 (290)
T ss_pred -hhhhhhHHHHHHHHHHHHHHHHHHHHHhccC--cchhHHHHHHHHHHHHHHHHhhhHHHHHHhchHHHHH--H---hhC
Confidence 2458999999999999999999888776432 222333333333321 2233322 222 11111 1 112
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 235 IIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 235 ~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
.|..++..+..+.--++....++....|...|+-+..........+.++-+-..+.....|..++..|..+-.
T Consensus 203 PWG~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLii 275 (290)
T KOG4314|consen 203 PWGCLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILII 275 (290)
T ss_pred CchhhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHhee
Confidence 3556555544444445666778888999988888877777778888776666788899999999999977654
No 43
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.71 E-value=6.6e-07 Score=80.92 Aligned_cols=211 Identities=16% Similarity=0.195 Sum_probs=122.8
Q ss_pred HHHHHH-HHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCC
Q psy14104 84 ASAAMT-YLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEES 162 (319)
Q Consensus 84 ~~~~~~-~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~ 162 (319)
...|+. ...+..+++.|+.+.|.+..+-+.+...++..+++..++|||++++++.|+.+++.|..++.....+..+..+
T Consensus 53 W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~~~~~t 132 (300)
T PF05653_consen 53 WWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKEEPIHT 132 (300)
T ss_pred HHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCCCCcCC
Confidence 445543 5677789999999999999999999999999999999999999999999999999999887754433221111
Q ss_pred cc---------hhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHH---HHHHHH-----HHH---HhCch
Q psy14104 163 TN---------FGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWS---CLFLGI-----SIL---ITGEI 222 (319)
Q Consensus 163 ~~---------~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~---~~g~~ 222 (319)
.. ....+......... .+..... ++++. .++..|....+ ..-.+. ..+ ..|+
T Consensus 133 ~~~l~~~~~~~~fl~y~~~~~~~~~-~L~~~~~----~r~g~--~~i~vyi~i~sl~Gs~tvl~~K~i~~~i~~~~~g~- 204 (300)
T PF05653_consen 133 LDELIALLSQPGFLVYFILVLVLIL-ILIFFIK----PRYGR--RNILVYISICSLIGSFTVLSAKAISILIKLTFSGD- 204 (300)
T ss_pred HHHHHHHhcCcceehhHHHHHHHHH-HHHHhhc----chhcc--cceEEEEEEeccccchhhhHHHHHHHHHHHHhcCc-
Confidence 00 01112111111111 1111111 11111 11122222211 110000 000 1111
Q ss_pred hHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHh-HHHHHHHHHHHHhcCCC--Cchh----hhhH
Q psy14104 223 FEFINFVNKYPSIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTT-TRKFFTVLGSIIFFGNV--MTSR----QWIA 295 (319)
Q Consensus 223 ~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~-~~~v~~i~ls~~~~~e~--~s~~----~~iG 295 (319)
+. -.+|..|..++....+......+.+.+++++|++....+.+ .-...+++-|.++|+|. .++. ...|
T Consensus 205 ----~~-f~~~~~y~l~~~~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~~~~~~~~~~~G 279 (300)
T PF05653_consen 205 ----NQ-FTYPLTYLLLLVLVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRMTAWQIIGFLCG 279 (300)
T ss_pred ----hh-hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccccHHHHHHHHHH
Confidence 00 12455555544443444445556678999999987665554 35667788888899974 5553 3456
Q ss_pred HhHHHHhHHHHH
Q psy14104 296 TFIVFTGLFLDS 307 (319)
Q Consensus 296 ~~li~~Gv~~~~ 307 (319)
..+++.|+++-+
T Consensus 280 ~~~ii~GV~lL~ 291 (300)
T PF05653_consen 280 FLIIIIGVFLLS 291 (300)
T ss_pred HHHHHHhhheee
Confidence 777888887765
No 44
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.70 E-value=3.8e-07 Score=82.05 Aligned_cols=132 Identities=10% Similarity=0.061 Sum_probs=95.7
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHHH
Q psy14104 169 EFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSAL 248 (319)
Q Consensus 169 ~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v 248 (319)
+.+.+.+++++|...+..|+..++ .++ ..++....+.+...|........ .++.....+.|..++..++....
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~--~~~--~~~~~~~~~~~~l~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~ 75 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADK--EPD--FLWWALLAHSVLLTPYGLWYLAQ---VGWSRLPATFWLLLAISAVANMV 75 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCc--hhH--HHHHHHHHHHHHHHHHHHHhccc---CCCCCcchhhHHHHHHHHHHHHH
Confidence 456778999999999988876543 233 23555566666666665432100 00111122233334444456677
Q ss_pred HHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 249 GQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 249 ~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
.+.+.+.++++.++...+++.+..|+++.+++++++||+++..+|+|+++++.|+.+-.
T Consensus 76 ~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~ 134 (281)
T TIGR03340 76 YFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLG 134 (281)
T ss_pred HHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHh
Confidence 88888999999999999999999999999999999999999999999999999998765
No 45
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.60 E-value=2.6e-06 Score=67.18 Aligned_cols=117 Identities=10% Similarity=0.080 Sum_probs=83.2
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHH-H
Q psy14104 167 FGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSV-L 245 (319)
Q Consensus 167 ~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~-~ 245 (319)
.|+++.+.+.++.+...+.-|+-.++.+. .+.... . . ..... ..+|..+ ++.++ +
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g~--~~~~~~----~-~---~~~~~-----------~~~p~~~---i~lgl~~ 57 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLPL--LSHAWD----F-I---AALLA-----------FGLALRA---VLLGLAG 57 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCCC--ccchhH----H-H---HHHHH-----------HhccHHH---HHHHHHH
Confidence 37888888988888888877776554332 111100 0 0 00000 0122212 33343 5
Q ss_pred HHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHH--hcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 246 SALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSII--FFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 246 ~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~--~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
..++++++.+++++.+...+.....+.++...+.++. +|||++|+.+++|++++++|+++.+
T Consensus 58 ~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 58 YALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 6788899999999999999999999988888888875 8999999999999999999999976
No 46
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.59 E-value=2.2e-06 Score=79.58 Aligned_cols=137 Identities=14% Similarity=0.087 Sum_probs=104.4
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHH
Q psy14104 168 GEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSA 247 (319)
Q Consensus 168 G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (319)
-+..++..-+.|+-..++.|...+. +.+|....++-..++.++++|+........ .....+...|..+.+.++++.
T Consensus 14 ~~~~~~~~q~~~~~~~~~~k~a~~~-G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~---~~~~~~~~~~~~l~l~g~~g~ 89 (358)
T PLN00411 14 FLTAMLATETSVVGISTLFKVATSK-GLNIYPFLGYSYLLASLLLLPSLFFTNRSR---SLPPLSVSILSKIGLLGFLGS 89 (358)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHC-CCCccHHHHHHHHHHHHHHHHHHHHHHHhc---ccCcchHHHHHHHHHHHHHHH
Confidence 3444556667888888888888854 899999999999999888888765421100 000011233445555666665
Q ss_pred HHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHh------cCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 248 LGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIF------FGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 248 v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~------~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
..+.+++.++++++|..++++.+..|+++.++++++ ++|+++..+++|+++.++|+.+...
T Consensus 90 ~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~ 156 (358)
T PLN00411 90 MYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIF 156 (358)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHH
Confidence 556678899999999999999999999999999999 6999999999999999999987653
No 47
>COG2510 Predicted membrane protein [Function unknown]
Probab=98.50 E-value=2.6e-06 Score=65.44 Aligned_cols=105 Identities=16% Similarity=0.121 Sum_probs=81.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cchhh--hHHHH-HHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHH
Q psy14104 48 MLALVFVQCVINYIYAKIMLLTFLKQGED-STRSV--YYASA-AMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLL 123 (319)
Q Consensus 48 p~~l~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~~--~~~~~-~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~ 123 (319)
|.+-+++|.++..+++.......++.... ....| .++.+ |+....+..+.|.+++.-++|-..-+..++|+++.++
T Consensus 31 p~~At~IRtiVi~~~l~~v~~~~g~~~~~~~~~~k~~lflilSGla~glswl~Yf~ALk~G~as~VvPldk~svvl~~ll 110 (140)
T COG2510 31 PDFATTIRTIVILIFLLIVLLVTGNWQAGGEIGPKSWLFLILSGLAGGLSWLLYFRALKKGKASRVVPLDKTSVVLAVLL 110 (140)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcCceecccccCcceehhhhHHHHHHHHHHHHHHHHHhcCCcceEEEcccccHHHHHHH
Confidence 66778999999888887765443332211 12223 23333 4445666778999999999998888999999999999
Q ss_pred HHHhcccccchhhHHHHHHHHHhhhheee
Q psy14104 124 GVLLGRKSYALKKYFFVLLVVIGVALFIY 152 (319)
Q Consensus 124 ~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~ 152 (319)
+++++|||++..++++++++++|+.++..
T Consensus 111 s~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 111 SILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999988753
No 48
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.48 E-value=5.2e-06 Score=73.49 Aligned_cols=131 Identities=16% Similarity=0.101 Sum_probs=92.1
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCCC-CCchhhhHHHHHH
Q psy14104 10 LKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQGE-DSTRSVYYASAAM 88 (319)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 88 (319)
.+..+....--.++..+++++++..+.. + +.+..+...++.++.+++.+.....++.+. +...+...+..++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~-~------~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKE-G------PELLQFTGWVLLLGALLLLPFAWFLGPNPQALSLQWGALLYLGL 199 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcC-C------chHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchHHHHHHHHHHH
Confidence 3444555555666777788888876321 1 113344556788887777665433222111 1112222344555
Q ss_pred H-HHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhh
Q psy14104 89 T-YLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGV 147 (319)
Q Consensus 89 ~-~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv 147 (319)
+ ...+..+.+.++++.+++...++.++.|++++++++++++|++++.++.++.+++.|+
T Consensus 200 ~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 200 IGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 4 4567788999999999999999999999999999999999999999999999999986
No 49
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.45 E-value=8.3e-06 Score=71.61 Aligned_cols=139 Identities=19% Similarity=0.284 Sum_probs=109.0
Q ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHH
Q psy14104 166 GFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVL 245 (319)
Q Consensus 166 ~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 245 (319)
.-|+++.+.+-+.|+....+.|-+. +.++.|+..+-..++.+++...........+..+ ...+|..+......++.
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll~---~~~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~-~~~~p~~~~~~~l~a~l 81 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLLE---PLPATEILAHRVIWSFPFMLALLFLLRQWRELKQ-LLKQPKTLLMLALTALL 81 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHc---cCCHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHH-HHhCcHHHHHHHHHHHH
Confidence 4699999999999999988887654 4688999999999999888776655444333333 23566666555544443
Q ss_pred HHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 246 SALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 246 ~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
-..--..+.++..+-....+|.=-.+.|.+.+++|.++++|+++..||+.+.+..+|+....+
T Consensus 82 i~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 82 IGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 333344566789999999999999999999999999999999999999999999999987763
No 50
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.45 E-value=9.3e-06 Score=65.88 Aligned_cols=135 Identities=17% Similarity=0.162 Sum_probs=96.9
Q ss_pred HHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCC-------CC-------Cchh
Q psy14104 15 YAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQG-------ED-------STRS 80 (319)
Q Consensus 15 ~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~-------~~-------~~~~ 80 (319)
++.+-..+..++.+++|+..+.. ++++++. .|..+.......+.+++.+........+ .+ ...+
T Consensus 4 ~~l~s~~~~al~~v~~~~~~~~~-~~~~~~~-~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~ 81 (153)
T PF03151_consen 4 LALASSLFSALRNVLIKKLLKKV-SSNSKKL-NPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNFI 81 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc-cccccCC-CHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHHH
Confidence 34444555667888888887663 1112334 3677777777777777766543322111 00 0112
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhhee
Q psy14104 81 VYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFI 151 (319)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~ 151 (319)
...+..+++....+...+..++++++-++.+....+.+.+.+++.++++|+++..++.|+++++.|+.+..
T Consensus 82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ys 152 (153)
T PF03151_consen 82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYS 152 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheee
Confidence 22344556677888999999999999999999999999999999999999999999999999999998754
No 51
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.44 E-value=9e-06 Score=62.72 Aligned_cols=100 Identities=24% Similarity=0.472 Sum_probs=72.7
Q ss_pred HHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHH-HHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhc
Q psy14104 206 KWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSA-LGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFF 284 (319)
Q Consensus 206 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~-v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~ 284 (319)
.++.+...+.....++..+..+.....+ +...+..++.+. .++..+++++++.++ ..++...+.|+++.++|.+++
T Consensus 6 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~ 82 (113)
T PF13536_consen 6 LFSVLFLLIILLIRGRLRDLFRALRRKP--WLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFF 82 (113)
T ss_pred HHHHHHHHHHHHHHccHHHHHHHHHhCc--HHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHh
Confidence 3444555554445454433333322222 223344455554 778889999999995 778999999999999999999
Q ss_pred CCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 285 GNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 285 ~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
+|+++..+++|+++++.|+.+-.+
T Consensus 83 ~er~~~~~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 83 KERLSPRRWLAILLILIGVILIAW 106 (113)
T ss_pred cCCCCHHHHHHHHHHHHHHHHHhh
Confidence 999999999999999999988774
No 52
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.32 E-value=1.6e-05 Score=71.98 Aligned_cols=132 Identities=11% Similarity=0.014 Sum_probs=93.1
Q ss_pred hHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCCC---CCchhhhHHHHHH
Q psy14104 12 FLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQGE---DSTRSVYYASAAM 88 (319)
Q Consensus 12 ~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~---~~~~~~~~~~~~~ 88 (319)
..+...+-..++..+++.+++..+. .+...+..|..++.+.+.+.......... +...+......++
T Consensus 151 G~l~~l~a~~~~a~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~l~i 220 (292)
T PRK11272 151 GAILILIASASWAFGSVWSSRLPLP----------VGMMAGAAEMLAAGVVLLIASLLSGERLTALPTLSGFLALGYLAV 220 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC----------cchHHHHHHHHHHHHHHHHHHHHcCCcccccCCHHHHHHHHHHHH
Confidence 3444555556677778888776421 13345667877777766554322211111 1122333444555
Q ss_pred H-HHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeee
Q psy14104 89 T-YLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYK 153 (319)
Q Consensus 89 ~-~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~ 153 (319)
. ......+.+.++++.+.+...++....|++.+++++++++|++++.+++|+++++.|+.+....
T Consensus 221 ~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~ 286 (292)
T PRK11272 221 FGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLG 286 (292)
T ss_pred HHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHH
Confidence 4 4566778999999999999999999999999999999999999999999999999999887543
No 53
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.26 E-value=2.1e-05 Score=60.42 Aligned_cols=63 Identities=21% Similarity=0.095 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhhee
Q psy14104 89 TYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFI 151 (319)
Q Consensus 89 ~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~ 151 (319)
++.....+...+++.+|.+.+-.+.++.++.+++.+++++|||++++++++++++++|+.++.
T Consensus 46 ~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 46 CLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 356677888999999999999988999999999999999999999999999999999998764
No 54
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.19 E-value=0.0025 Score=58.51 Aligned_cols=222 Identities=13% Similarity=0.078 Sum_probs=131.9
Q ss_pred HHHHHHHHHHHHHHHHHhcccchhHHH-HhhhcchHHHHHHHHHhccccc---c----hhhHHHHHHHHHhhhheee---
Q psy14104 84 ASAAMTYLLAMVCSNMALQWINYPTQV-IGKSAKPIPVMLLGVLLGRKSY---A----LKKYFFVLLVVIGVALFIY--- 152 (319)
Q Consensus 84 ~~~~~~~~~~~~~~~~sl~~~~~~~~~-i~~~~~pi~v~l~~~l~~~~~~---~----~~~~~~~~l~~~Gv~l~~~--- 152 (319)
.+-+.+...++..+..+.+++.+|... +......+...++..++++|-. + ..-.++++++++|+++...
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 445566778889999999998887654 4445567777788888887644 2 3357788889999999887
Q ss_pred -ecCCCCC--CCCcchhhHHHHHHHHHHHHhhhH-------HHHHHHHhhcCCChhhHHHHhHH---HHHHHH-HHHHHH
Q psy14104 153 -KDGKASK--EESTNFGFGEFLLILSLLMDGLTG-------AVQERMKSESQTKSGHMMVAMNK---WSCLFL-GISILI 218 (319)
Q Consensus 153 -~~~~~~~--~~~~~~~~G~~l~~~s~~~~a~~~-------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~ 218 (319)
.|.+.+. +.+.+...|+++++.|.+.+++++ ...+...+ .+.++.....-+.. .+..+. +.+...
T Consensus 157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~-~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~ 235 (345)
T PRK13499 157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAA-LGVDPLYAALPSYVVIMGGGAITNLGFCFI 235 (345)
T ss_pred hcccccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhh-cCCCchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4432211 112245689999999999999998 33333222 24444332221211 111111 111110
Q ss_pred ---hCchhH-HHHhhhhchHHHHHH---HHHHHHHHHHHHHHHHHHHHhCchHHHH---HH-hHHHHHHHHHHHHhcCCC
Q psy14104 219 ---TGEIFE-FINFVNKYPSIIYQL---FLFSVLSALGQFFIFLTVTEYGPLPCSI---VT-TTRKFFTVLGSIIFFGNV 287 (319)
Q Consensus 219 ---~g~~~~-~~~~~~~~~~~~~~i---~~~~~~~~v~~~~~~~~l~~~~a~~~si---~~-~~~~v~~i~ls~~~~~e~ 287 (319)
.++-.+ ..+.....+..+... .+-|+.=++++.++..+-++.|.....+ .+ .+.-+++.+.|+ ++||.
T Consensus 236 ~~~k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi-~lkE~ 314 (345)
T PRK13499 236 RLAKNKDLSLKADFSLAKPLLITNVLLSALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGL-VLKEW 314 (345)
T ss_pred HHhhCCCcccchhccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhh-hhhhc
Confidence 111100 001100001112221 2223344567777777777776554444 44 777799999999 59997
Q ss_pred Cc------hhhhhHHhHHHHhHHHHH
Q psy14104 288 MT------SRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 288 ~s------~~~~iG~~li~~Gv~~~~ 307 (319)
=+ ...++|+++++.|..+..
T Consensus 315 K~a~~k~~~~l~~G~vliI~g~~lig 340 (345)
T PRK13499 315 KGASRRPVRVLSLGCVVIILAANIVG 340 (345)
T ss_pred cCCCccchhHHHHHHHHHHHHHHHHh
Confidence 66 677999999999988765
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.16 E-value=7.8e-05 Score=67.71 Aligned_cols=127 Identities=13% Similarity=0.180 Sum_probs=92.8
Q ss_pred HHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHHHHHHHHH
Q psy14104 175 SLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSALGQFFIF 254 (319)
Q Consensus 175 s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~ 254 (319)
.-++....++++|...++. ..|..+.+.....+.+...+.. ..+... ....+.+.|..++..|++....+.+.+
T Consensus 10 w~~~~~~~~~~NK~~l~~~-~~P~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~~~~g~~~~~~~~~~~ 83 (302)
T TIGR00817 10 WYFLNVYFNIYNKKLLNVF-PYPYFKTLISLAVGSLYCLLSW-SSGLPK----RLKISSALLKLLLPVAIVHTIGHVTSN 83 (302)
T ss_pred HHHHHHHHHHHHHHHHhhC-ChhHHHHHHHHHHHHHHHHHHH-HhCCCC----CCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455567788888653 4577777777766655544331 111100 001123456666777777777778889
Q ss_pred HHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 255 LTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 255 ~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
.+++++++...+++..+.|+++.+++.++++|+++..+++|.++.++|+.+..
T Consensus 84 ~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 84 VSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999999997643
No 56
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.16 E-value=7.3e-05 Score=67.85 Aligned_cols=123 Identities=16% Similarity=0.155 Sum_probs=89.8
Q ss_pred HHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHHHH
Q psy14104 170 FLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSALG 249 (319)
Q Consensus 170 ~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v~ 249 (319)
++.+.+.++|+......|...+ +.+|....++-..++.+..++.... + .. .+......++....+
T Consensus 7 l~~l~~~~~Wg~~~~~~k~~~~--~~~p~~~~~~R~~~a~~~l~~~~~~--~---------~~--~~~~~~~~g~~~~~~ 71 (299)
T PRK11453 7 VLALLVVVVWGLNFVVIKVGLH--NMPPLMLAGLRFMLVAFPAIFFVAR--P---------KV--PLNLLLGYGLTISFG 71 (299)
T ss_pred HHHHHHHHHHhhhHHHHHHHHh--cCCHHHHHHHHHHHHHHHHHHHhcC--C---------CC--chHHHHHHHHHHHHH
Confidence 4466788999999999887665 5789999998888776555443211 0 01 122233334433333
Q ss_pred H-HHHHHHHHH-hCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 250 Q-FFIFLTVTE-YGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 250 ~-~~~~~~l~~-~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
+ .+++.++++ .++..++++....|+.+.++++++++|+++..+++|+++.+.|+.+-.
T Consensus 72 ~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~ 131 (299)
T PRK11453 72 QFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLI 131 (299)
T ss_pred HHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhc
Confidence 3 355667777 577889999999999999999999999999999999999999987765
No 57
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.11 E-value=0.00011 Score=68.26 Aligned_cols=134 Identities=12% Similarity=0.070 Sum_probs=98.2
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHhhcCCC-hhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHH
Q psy14104 169 EFLLILSLLMDGLTGAVQERMKSESQTK-SGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSA 247 (319)
Q Consensus 169 ~~l~~~s~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (319)
..+++..-.+........|.+.++ .+ |..+..+....+.+++.+.... +. .+..+. ......|..++..|+++.
T Consensus 51 ~~~~~~wy~~s~~~~~~nK~vl~~--~~~P~~l~~~~~~~~~l~~~~~~~~-~~-~~~~~~-~~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 51 ALLFLTWYALNVLYVVDNKLALNM--LPLPWTISSLQLFVGWLFALLYWAT-GF-RKIPRI-KSLKLFLKNFLPQGLCHL 125 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHh--CChhHHHHHHHHHHHHHHHHHHHHh-CC-CCCCCC-CCHHHHHHHHHHHHHHHH
Confidence 334444445556667788888875 45 8999988888887765544321 11 000001 001224556677777777
Q ss_pred HHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 248 LGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 248 v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
.++...+.++++.++..++++..+.|+++++++.++++|+++..+++|++++++|+.+..
T Consensus 126 ~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 126 FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 777777789999999999999999999999999999999999999999999999998765
No 58
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.11 E-value=9.1e-05 Score=67.09 Aligned_cols=129 Identities=10% Similarity=0.048 Sum_probs=90.4
Q ss_pred hHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHH
Q psy14104 167 FGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLS 246 (319)
Q Consensus 167 ~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 246 (319)
.++++++.+.++|+......|...+ +.+|.....+-...+.+++.+... . .. . ... .+..++..++..
T Consensus 4 ~~~l~~l~a~~~Wg~~~~~~k~~~~--~~~P~~~~~~R~~~a~l~l~~~~~---~-~~---~-~~~--~~~~~~~~~l~~ 71 (295)
T PRK11689 4 KATLIGLIAILLWSTMVGLIRGVSE--SLGPVGGAAMIYSVSGLLLLLTVG---F-PR---L-RQF--PKRYLLAGGLLF 71 (295)
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHc--cCChHHHHHHHHHHHHHHHHHHcc---c-cc---c-ccc--cHHHHHHHhHHH
Confidence 3566778888999999888887665 578999988888888777665421 0 00 0 011 111222222222
Q ss_pred HHHHHHHHHHHH----HhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 247 ALGQFFIFLTVT----EYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 247 ~v~~~~~~~~l~----~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
.....+.+.+++ ..++..++++.++.|+++.++++++++|+++..+++|+++.+.|+.+-.
T Consensus 72 ~~~~~~~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~ 136 (295)
T PRK11689 72 VSYEICLALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVL 136 (295)
T ss_pred HHHHHHHHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhhee
Confidence 233334444444 5677888999999999999999999999999999999999999987654
No 59
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.08 E-value=0.00011 Score=66.40 Aligned_cols=132 Identities=10% Similarity=-0.021 Sum_probs=88.3
Q ss_pred HHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCC-chhhhHHHHHHH-H
Q psy14104 13 LFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQGEDS-TRSVYYASAAMT-Y 90 (319)
Q Consensus 13 ~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~~~~~~~~~-~ 90 (319)
.+...+--.++..|..+.++..+.. + |... ..+..++.+.+.............. ..+...+..++. .
T Consensus 150 ~ll~l~aa~~~a~~~v~~r~~~~~~-~--------~~~~-~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~lgv~~t 219 (293)
T PRK10532 150 AALALGAGACWAIYILSGQRAGAEH-G--------PATV-AIGSLIAALIFVPIGALQAGEALWHWSILPLGLAVAILST 219 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhccC-C--------chHH-HHHHHHHHHHHHHHHHHccCcccCCHHHHHHHHHHHHHHH
Confidence 3444444566777778777775321 1 3333 3445555555444332221111111 111122345554 4
Q ss_pred HHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeec
Q psy14104 91 LLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKD 154 (319)
Q Consensus 91 ~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 154 (319)
.....+.+.++++++++.+.+..+..|++..++++++++|++++.+++|.++++.|+.......
T Consensus 220 ~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~ 283 (293)
T PRK10532 220 ALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTI 283 (293)
T ss_pred HHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcC
Confidence 5666788999999999999999999999999999999999999999999999999988875443
No 60
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.04 E-value=5e-05 Score=58.31 Aligned_cols=62 Identities=10% Similarity=0.216 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 246 SALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 246 ~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
...+.+++..++++.+...+.....+.++.+.++|+++|||++|+.+++|++++++|+..-.
T Consensus 47 ~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 47 LGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 44567788889999999999999999999999999999999999999999999999997654
No 61
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=97.97 E-value=0.00015 Score=65.88 Aligned_cols=123 Identities=11% Similarity=0.151 Sum_probs=91.6
Q ss_pred hHHHHHHHHhhcCCC--hhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14104 182 TGAVQERMKSESQTK--SGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSALGQFFIFLTVTE 259 (319)
Q Consensus 182 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~l~~ 259 (319)
+.+.||++.++...+ +.-+++.+.....+...+....... .......+......+++..++..+.+.++++
T Consensus 15 ~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~al~~ 87 (303)
T PF08449_consen 15 YGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKF-------PKSRKIPLKKYAILSFLFFLASVLSNAALKY 87 (303)
T ss_pred HHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhccc-------cCCCcChHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 557899988764444 6666666666666666555443320 0111122334455566777777888899999
Q ss_pred hCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcc
Q psy14104 260 YGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSS 311 (319)
Q Consensus 260 ~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~ 311 (319)
.+-.+..+.-..+++.+++++.+++|++.+..++.+++++.+|+.+..+.+.
T Consensus 88 i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~ 139 (303)
T PF08449_consen 88 ISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDS 139 (303)
T ss_pred CChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccc
Confidence 9999999999999999999999999999999999999999999999875443
No 62
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.92 E-value=0.00014 Score=65.67 Aligned_cols=130 Identities=22% Similarity=0.197 Sum_probs=91.7
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHH
Q psy14104 168 GEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSA 247 (319)
Q Consensus 168 G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (319)
|+++++.++++|+...+..|++. +.++.+.+. ..++..+.........+. + ...+..+..-+..|+.=.
T Consensus 2 ~~l~~lia~~~wGs~g~~~k~~~---g~~~~~~~~--~~~g~l~~~~~~~~~~~~----~--~~~~~~~~~g~l~G~~w~ 70 (290)
T TIGR00776 2 DILIALIPALFWGSFVLINVKIG---GGPYSQTLG--TTFGALILSIAIAIFVLP----E--FWALSIFLVGLLSGAFWA 70 (290)
T ss_pred chHHHHHHHHHHhhhHHHHhccC---CCHHHHHHH--HHHHHHHHHHHHHHHhCC----c--ccccHHHHHHHHHHHHHH
Confidence 67788899999999999888754 455555542 233333332222111110 0 012333333344444556
Q ss_pred HHHHHHHHHHHHhCchHHHHHHh-HHHHHHHHHHHHhcCCCCchhh----hhHHhHHHHhHHHHHh
Q psy14104 248 LGQFFIFLTVTEYGPLPCSIVTT-TRKFFTVLGSIIFFGNVMTSRQ----WIATFIVFTGLFLDSF 308 (319)
Q Consensus 248 v~~~~~~~~l~~~~a~~~si~~~-~~~v~~i~ls~~~~~e~~s~~~----~iG~~li~~Gv~~~~~ 308 (319)
++|++++.++++.|...+-.+.+ +.++...+++.+++||+.+..+ ++|+++++.|+++...
T Consensus 71 ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~ 136 (290)
T TIGR00776 71 LGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSR 136 (290)
T ss_pred hhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEe
Confidence 78999999999999999988887 8888999999999999999999 9999999999888763
No 63
>KOG2922|consensus
Probab=97.79 E-value=0.00031 Score=62.64 Aligned_cols=215 Identities=14% Similarity=0.120 Sum_probs=130.2
Q ss_pred HHHHH-HHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeecCCCCCCCCc
Q psy14104 85 SAAMT-YLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKDGKASKEEST 163 (319)
Q Consensus 85 ~~~~~-~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~~~~~~~~~~ 163 (319)
..|++ ..++-..++.|+.+.|.+.-+-+-+.+.+...+++..++|||+++...+|+.++++|-.+++...++.....+.
T Consensus 68 w~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~~i~t~ 147 (335)
T KOG2922|consen 68 WAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQEIESV 147 (335)
T ss_pred HHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcccccccH
Confidence 34544 56778899999999999999999999999999999999999999999999999999988877655443221110
Q ss_pred c------hhhHHH----HHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHH--hCchhH-HHH--h
Q psy14104 164 N------FGFGEF----LLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILI--TGEIFE-FIN--F 228 (319)
Q Consensus 164 ~------~~~G~~----l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~g~~~~-~~~--~ 228 (319)
. .-+|++ +.++..+.--+ ...++++ ...++.|....+.+-.+-..-. .|.... ..+ .
T Consensus 148 ~el~~~~~~~~Fliy~~~iil~~~il~~------~~~p~~g--~tnilvyi~i~s~iGS~tV~svKalg~aiklt~~g~~ 219 (335)
T KOG2922|consen 148 EEVWELATEPGFLVYVIIIILIVLILIF------FYAPRYG--QTNILVYIGICSLIGSLTVMSVKALGIAIKLTFSGNN 219 (335)
T ss_pred HHHHHHhcCccHHHHHHHHHHHHHHHhe------eeccccc--ccceeehhhHhhhhcceeeeeHHHHHHHHHHHhcCCc
Confidence 0 012221 11111111100 1112222 2334455555444321100000 000000 000 0
Q ss_pred hhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhH-HHHHHHHHHHHhcCCC--Cchh----hhhHHhHHHH
Q psy14104 229 VNKYPSIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTT-RKFFTVLGSIIFFGNV--MTSR----QWIATFIVFT 301 (319)
Q Consensus 229 ~~~~~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~-~~v~~i~ls~~~~~e~--~s~~----~~iG~~li~~ 301 (319)
...+|..|..++....|....-...+.+++.+++...+.+.+. -..++++.|.++|+|. .+.. ...|...++.
T Consensus 220 ql~~~~ty~~~l~~~~~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~~~~~~i~~~~~Gf~ti~~ 299 (335)
T KOG2922|consen 220 QLFYPLTWIFLLVVATCVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSGQDALDIAGELCGFVTIFL 299 (335)
T ss_pred ccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcCCcHHHHHHHHHhHHHhhh
Confidence 0134555655555544555555566789999999987777754 6778888899999874 4444 4567777888
Q ss_pred hHHHHH
Q psy14104 302 GLFLDS 307 (319)
Q Consensus 302 Gv~~~~ 307 (319)
|+++..
T Consensus 300 G~flL~ 305 (335)
T KOG2922|consen 300 GIFLLH 305 (335)
T ss_pred eeeEee
Confidence 887754
No 64
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.74 E-value=0.00047 Score=53.45 Aligned_cols=72 Identities=18% Similarity=0.142 Sum_probs=61.0
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHHHh-hhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeec
Q psy14104 83 YASAAMTYLLAMVCSNMALQWINYPTQVIG-KSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKD 154 (319)
Q Consensus 83 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~-~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 154 (319)
.....+++..+.++...+++++|.+.+--+ .....+.+.+.+.++++|++++.+++++.++++|+...-..+
T Consensus 33 ~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 33 FILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 455556677888899999999999976544 568899999999999999999999999999999998876544
No 65
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=97.74 E-value=0.0018 Score=57.77 Aligned_cols=138 Identities=17% Similarity=0.153 Sum_probs=93.0
Q ss_pred hhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHH
Q psy14104 165 FGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSV 244 (319)
Q Consensus 165 ~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~ 244 (319)
...+....+...+.|+......+...++ ..+.....+.....+.+...+...... . .........+...+.-++
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~ 78 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVES-LDPFLFAAALRFLIAALLLLPLLLLEP--R---GLRPALRPWLLLLLLALL 78 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcc-cCChHHHHHHHHHHHHHHHHHHHHhhc--c---cccccccchHHHHHHHHH
Confidence 3567777777778888887777766543 244555555455555444222211110 0 000111112223333344
Q ss_pred HHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHH-HhcCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 245 LSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSI-IFFGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 245 ~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~-~~~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
.....+..++.++++.++..+++.....|+++.+++. ++++|+++..++.|..+.+.|+.+...
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~ 143 (292)
T COG0697 79 GLALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILL 143 (292)
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheec
Confidence 5677788889999999999999999999999999996 777999999999999999999988763
No 66
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.63 E-value=0.0019 Score=59.27 Aligned_cols=140 Identities=15% Similarity=0.104 Sum_probs=94.2
Q ss_pred hhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHH--HHHHH---HHHhCchhHHHHhhhhchHHHHHH
Q psy14104 165 FGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCL--FLGIS---ILITGEIFEFINFVNKYPSIIYQL 239 (319)
Q Consensus 165 ~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~g~~~~~~~~~~~~~~~~~~i 239 (319)
...|+++++.++++++...+-+|| .|+ -++|.. |. ..+.. ++.|. .+..+++.+. ..+.++..+...
T Consensus 5 ~~~G~~~~~i~~~~~GS~~~p~K~-~k~---w~wE~~-W~-v~gi~~wl~~~~~~g~~~~~~f~~~--~~~~~~~~~~~~ 76 (345)
T PRK13499 5 IILGIIWHLIGGASSGSFYAPFKK-VKK---WSWETM-WS-VGGIFSWLILPWLIAALLLPDFWAY--YSSFSGSTLLPV 76 (345)
T ss_pred hHHHHHHHHHHHHHhhcccccccc-cCC---CchhHH-HH-HHHHHHHHHHHHHHHHHHhhhHHHH--HHhcCHHHHHHH
Confidence 478999999999999999887777 332 346655 33 22221 12231 1112222221 112455566665
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCchHH-HHHHhHHHHHHHHHHHHhcCCCC---c----hhhhhHHhHHHHhHHHHHhhcc
Q psy14104 240 FLFSVLSALGQFFIFLTVTEYGPLPC-SIVTTTRKFFTVLGSIIFFGNVM---T----SRQWIATFIVFTGLFLDSFYSS 311 (319)
Q Consensus 240 ~~~~~~~~v~~~~~~~~l~~~~a~~~-si~~~~~~v~~i~ls~~~~~e~~---s----~~~~iG~~li~~Gv~~~~~~~~ 311 (319)
.+.|+.=.++|..++.++|+.|-... .+..-+.-+.+.+++.+++||-. + ....+|+++++.|+.+..+...
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 66666778899999999999998764 44556688899999999999743 2 3578899999999999986433
Q ss_pred h
Q psy14104 312 K 312 (319)
Q Consensus 312 ~ 312 (319)
+
T Consensus 157 ~ 157 (345)
T PRK13499 157 L 157 (345)
T ss_pred h
Confidence 3
No 67
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.60 E-value=0.00078 Score=50.62 Aligned_cols=72 Identities=24% Similarity=0.182 Sum_probs=59.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHhcccchhHH-HHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheee
Q psy14104 81 VYYASAAMTYLLAMVCSNMALQWINYPTQ-VIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIY 152 (319)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~sl~~~~~~~~-~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~ 152 (319)
......-+++..+..+.-.++|.+|.+++ .+-.....+.+.+.++++++|+.+..+++++.++++|+...-.
T Consensus 31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 33444556667778888999999999865 5666678888899999999999999999999999999987643
No 68
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=97.59 E-value=0.00039 Score=54.83 Aligned_cols=70 Identities=24% Similarity=0.269 Sum_probs=59.6
Q ss_pred HHHHH-HHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHH--hcccccchhhHHHHHHHHHhhhheeee
Q psy14104 84 ASAAM-TYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVL--LGRKSYALKKYFFVLLVVIGVALFIYK 153 (319)
Q Consensus 84 ~~~~~-~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l--~~~~~~~~~~~~~~~l~~~Gv~l~~~~ 153 (319)
...++ ++..+..+.+.+++..|.+.+.-+.+..++.+++.++. +++|++++.++++++++++|+.+...+
T Consensus 51 i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 51 VLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 34444 46778889999999999999988888888888888875 899999999999999999999998654
No 69
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.57 E-value=0.0013 Score=49.73 Aligned_cols=69 Identities=13% Similarity=0.161 Sum_probs=57.9
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHH-HHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhhee
Q psy14104 83 YASAAMTYLLAMVCSNMALQWINYPTQ-VIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFI 151 (319)
Q Consensus 83 ~~~~~~~~~~~~~~~~~sl~~~~~~~~-~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~ 151 (319)
.....+++..+.++...+++.+|.+.+ .+--....+.+.+.+.+++||+.++.+++++.+++.|+...-
T Consensus 32 ~~~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 32 SIITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 344455667788888999999999865 555558888999999999999999999999999999998764
No 70
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.56 E-value=0.0013 Score=50.12 Aligned_cols=68 Identities=13% Similarity=0.120 Sum_probs=56.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHH-HHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhhe
Q psy14104 83 YASAAMTYLLAMVCSNMALQWINYPTQ-VIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALF 150 (319)
Q Consensus 83 ~~~~~~~~~~~~~~~~~sl~~~~~~~~-~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~ 150 (319)
.....+++..+.++...++|.+|.+.+ .+--....+.+.+.+.+++||++++.+++++.+++.|+...
T Consensus 38 ~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 38 GILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 334455566778888899999999865 55556778888999999999999999999999999999874
No 71
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.56 E-value=0.0036 Score=49.96 Aligned_cols=130 Identities=14% Similarity=0.151 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHHH
Q psy14104 169 EFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSAL 248 (319)
Q Consensus 169 ~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v 248 (319)
.++.+.+.++-+.....+-++.++.+ ||....+.+...+.+.+....+..++. +..+. .+..|+..+ -|+++..
T Consensus 3 ~lla~~aG~~i~~q~~~N~~L~~~~g-s~~~as~i~~~~G~i~~~i~~~~~~~~-~~~~~---~~~p~w~~l-GG~lG~~ 76 (138)
T PF04657_consen 3 ILLALLAGALIALQAAFNGQLGKALG-SPLVASFISFGVGFILLLIILLITGRP-SLASL---SSVPWWAYL-GGLLGVF 76 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhC-ccHHHHHHHHHHHHHHHHHHHHHhccc-ccchh---ccCChHHhc-cHHHHHH
Confidence 34556666677777777777776544 588888888888888877776665543 11111 112233322 3556776
Q ss_pred HHHHHHHHHHHhCchHHHHHHhH-HHHHHHHHHHH-hc---CCCCchhhhhHHhHHHHhHH
Q psy14104 249 GQFFIFLTVTEYGPLPCSIVTTT-RKFFTVLGSII-FF---GNVMTSRQWIATFIVFTGLF 304 (319)
Q Consensus 249 ~~~~~~~~l~~~~a~~~si~~~~-~~v~~i~ls~~-~~---~e~~s~~~~iG~~li~~Gv~ 304 (319)
.-......+++.|+..+...... +-+.+++++.+ +| ++++++.+.+|.++++.|++
T Consensus 77 ~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~ 137 (138)
T PF04657_consen 77 FVLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVI 137 (138)
T ss_pred HHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHh
Confidence 66777788999999987777766 55566677765 23 46899999999999999986
No 72
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.55 E-value=0.00075 Score=52.31 Aligned_cols=66 Identities=14% Similarity=0.176 Sum_probs=54.9
Q ss_pred HHHHHHHHHHHHHHHhCchH-HHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhc
Q psy14104 245 LSALGQFFIFLTVTEYGPLP-CSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYS 310 (319)
Q Consensus 245 ~~~v~~~~~~~~l~~~~a~~-~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~ 310 (319)
+-.++.+++..++|+.+-.. .++-.-+.-+.+.++|+++|||++|+.+++|+++++.|++.-...+
T Consensus 39 ~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 39 MISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 44566677778888888776 4555678889999999999999999999999999999998877544
No 73
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.52 E-value=0.0014 Score=50.03 Aligned_cols=69 Identities=13% Similarity=0.082 Sum_probs=57.7
Q ss_pred HHHHHHHHHHHHHHHHhcccchhHHHHh-hhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeee
Q psy14104 85 SAAMTYLLAMVCSNMALQWINYPTQVIG-KSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYK 153 (319)
Q Consensus 85 ~~~~~~~~~~~~~~~sl~~~~~~~~~i~-~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~ 153 (319)
..-+++..+..+...+++.+|.+.+--. -....+.+.+.++++++|++++.+++++.++++|+...-..
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3445567777888899999999977554 44778888999999999999999999999999999987543
No 74
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.50 E-value=0.0011 Score=50.63 Aligned_cols=65 Identities=15% Similarity=0.155 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHhCchH-HHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhc
Q psy14104 246 SALGQFFIFLTVTEYGPLP-CSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYS 310 (319)
Q Consensus 246 ~~v~~~~~~~~l~~~~a~~-~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~ 310 (319)
-.++.++...++|+.+-.. .++-+-+.-+.+.+.|+++|||++|+.+++|+++++.|++.-+..+
T Consensus 40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 4455566677888888766 5555778889999999999999999999999999999999887444
No 75
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=97.42 E-value=0.0032 Score=57.75 Aligned_cols=75 Identities=16% Similarity=0.268 Sum_probs=67.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhh
Q psy14104 235 IIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFY 309 (319)
Q Consensus 235 ~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~ 309 (319)
.|+.-++++++=..++++...+.++++.+...+......++++++|+++++++.++.|++|++++++|+.+...-
T Consensus 78 ~~w~y~lla~~Dv~aN~~~v~a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~s 152 (334)
T PF06027_consen 78 PWWKYFLLALLDVEANYLVVLAYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVS 152 (334)
T ss_pred hHHHHHHHHHHHHHHHHHHHHHhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeee
Confidence 344445567888899999999999999999999999999999999999999999999999999999999876644
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.35 E-value=0.0081 Score=45.75 Aligned_cols=62 Identities=13% Similarity=0.165 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHHHHHhCchH-HHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHH
Q psy14104 245 LSALGQFFIFLTVTEYGPLP-CSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLD 306 (319)
Q Consensus 245 ~~~v~~~~~~~~l~~~~a~~-~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~ 306 (319)
+..+++++...++|+.+-.+ .++-+-+.-+.+.+.|+++|||++|+.+++|+++++.|+..-
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 44556677778889888765 677788899999999999999999999999999999999864
No 77
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.33 E-value=0.0013 Score=57.86 Aligned_cols=69 Identities=22% Similarity=0.484 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhh
Q psy14104 241 LFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFY 309 (319)
Q Consensus 241 ~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~ 309 (319)
.=+++-.+.+.+.+.++++.+|.+..+....|.+++.++++++++++++..||+++.+...|+.+...-
T Consensus 22 vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~ 90 (244)
T PF04142_consen 22 VPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLS 90 (244)
T ss_pred HHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecC
Confidence 334566778889999999999999999999999999999999999999999999999999999987743
No 78
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=97.29 E-value=0.00015 Score=62.12 Aligned_cols=209 Identities=16% Similarity=0.216 Sum_probs=136.9
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHH-HhhhcchHHHHHHHHHhcccccchhhH----HHHHHHHHhhhheeeecCCCCC-
Q psy14104 86 AAMTYLLAMVCSNMALQWINYPTQV-IGKSAKPIPVMLLGVLLGRKSYALKKY----FFVLLVVIGVALFIYKDGKASK- 159 (319)
Q Consensus 86 ~~~~~~~~~~~~~~sl~~~~~~~~~-i~~~~~pi~v~l~~~l~~~~~~~~~~~----~~~~l~~~Gv~l~~~~~~~~~~- 159 (319)
-+.+...+...++.|.+++.+|-+. +-..+..+-+.+++.+.++|..+..+. +++++.+.|+++-...|.+...
T Consensus 65 sG~~Ws~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~~nk~~ 144 (288)
T COG4975 65 SGAFWSFGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDRNNKEE 144 (288)
T ss_pred hhhHhhhhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeeccccccc
Confidence 3444567888899999998877664 333455677789999999999888774 5677888999998876642111
Q ss_pred CCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHH-HHhCchhHHHHhhhhchHHHHH
Q psy14104 160 EESTNFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISI-LITGEIFEFINFVNKYPSIIYQ 238 (319)
Q Consensus 160 ~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~ 238 (319)
++..+.--|+..++.|.+-|-.|.+..+. .+.+...... ...+++++..... ....|.. .+...|..
T Consensus 145 ~~~~n~kkgi~~L~iSt~GYv~yvvl~~~----f~v~g~saiL-PqAiGMv~~ali~~~~~~~~~-------~~K~t~~n 212 (288)
T COG4975 145 ENPSNLKKGIVILLISTLGYVGYVVLFQL----FDVDGLSAIL-PQAIGMVIGALILGFFKMEKR-------FNKYTWLN 212 (288)
T ss_pred cChHhhhhheeeeeeeccceeeeEeeecc----ccccchhhhh-HHHHHHHHHHHHHhhcccccc-------hHHHHHHH
Confidence 11123446777777788877777664433 2344444332 2334444433221 2211110 11222322
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhh----hhHHhHHHHhHHHHH
Q psy14104 239 LFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQ----WIATFIVFTGLFLDS 307 (319)
Q Consensus 239 i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~----~iG~~li~~Gv~~~~ 307 (319)
+.-++.=.+++.+++.+-++.|-.+.=..+.+..+++.+-|+++++|+=|..+ ++|+++++.|..+..
T Consensus 213 -ii~G~~Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg 284 (288)
T COG4975 213 -IIPGLIWAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLG 284 (288)
T ss_pred -HhhHHHHHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhh
Confidence 33455567889999999999998887778888899999999999999888655 568888888876654
No 79
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.27 E-value=0.0033 Score=47.57 Aligned_cols=63 Identities=6% Similarity=0.099 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHhCchH-HHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 245 LSALGQFFIFLTVTEYGPLP-CSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 245 ~~~v~~~~~~~~l~~~~a~~-~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
+-.+++++...++|+.+-.. .++-.-+..+.+.+.|+++|||++|+.+++|+++++.|++.-+
T Consensus 38 ~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~ 101 (105)
T PRK11431 38 AMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLK 101 (105)
T ss_pred HHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhh
Confidence 34556667777888888765 6777888999999999999999999999999999999998765
No 80
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.26 E-value=0.0034 Score=55.50 Aligned_cols=115 Identities=22% Similarity=0.277 Sum_probs=79.8
Q ss_pred CCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhH-H
Q psy14104 194 QTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTT-R 272 (319)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~-~ 272 (319)
+-+|.+...-+..-+.++.+...++....+ +.++..+....+.|++=.++|...+.+.++.|-+.+..+++- +
T Consensus 9 gG~~~~Q~lG~t~Gali~alv~~~~~~p~~------~~~~~~~~~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~Q 82 (269)
T PF06800_consen 9 GGKPANQILGTTIGALIFALVVFLFRQPAF------SMSGTSFIVAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQ 82 (269)
T ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHhCCCc------chHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHH
Confidence 446777776666655555554444332211 112344544455566667899999999999999998888865 5
Q ss_pred HHHHHHHHHHhcCCCCchhhhh----HHhHHHHhHHHHHhhcchhh
Q psy14104 273 KFFTVLGSIIFFGNVMTSRQWI----ATFIVFTGLFLDSFYSSKES 314 (319)
Q Consensus 273 ~v~~i~ls~~~~~e~~s~~~~i----G~~li~~Gv~~~~~~~~~~~ 314 (319)
-+.+.++|+++|||.-+..+++ ++++++.|+.+.++-+|+++
T Consensus 83 Lvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~ 128 (269)
T PF06800_consen 83 LVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSD 128 (269)
T ss_pred HHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccccc
Confidence 5568889999999987765544 88889999999996554444
No 81
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.11 E-value=0.005 Score=46.29 Aligned_cols=63 Identities=14% Similarity=0.185 Sum_probs=53.4
Q ss_pred HHHHHHHHHHHHHHhCchH-HHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHh
Q psy14104 246 SALGQFFIFLTVTEYGPLP-CSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 246 ~~v~~~~~~~~l~~~~a~~-~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
-.+++.+...++|+.+-.+ .++-+-...+.+.+.|+++|||++++.+++|+.++++|++.-+.
T Consensus 40 ~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~ 103 (106)
T COG2076 40 YGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKL 103 (106)
T ss_pred HHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhh
Confidence 3445566667888888665 68888889999999999999999999999999999999987663
No 82
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.02 E-value=0.0038 Score=56.62 Aligned_cols=124 Identities=18% Similarity=0.256 Sum_probs=87.4
Q ss_pred chhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHH
Q psy14104 164 NFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFS 243 (319)
Q Consensus 164 ~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 243 (319)
++.+|..+++.|+++.+...++||+...|.+.++... ++ ...++ ..+| .|+.-+.
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~~~~~~-------------------~~--~~~~~-l~~~-~W~~G~~-- 58 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPRGSLRA-------------------GS--GGRSY-LRRP-LWWIGLL-- 58 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc-------------------cc--hhhHH-HhhH-HHHHHHH--
Confidence 4689999999999999999999998765422111100 00 00001 1122 2333222
Q ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchh
Q psy14104 244 VLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKE 313 (319)
Q Consensus 244 ~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~ 313 (319)
...+++...+.++...+++..+..+.+.-+.+.+++..++||+++...+.|+++++.|..+......++
T Consensus 59 -~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~~ 127 (300)
T PF05653_consen 59 -LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPKE 127 (300)
T ss_pred -HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCCC
Confidence 233455566678899999999999999999999999999999999999999999999997765455443
No 83
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.83 E-value=0.011 Score=43.82 Aligned_cols=57 Identities=21% Similarity=0.283 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHHhcccchhHH-HHhhhcchHHHHHHHHHhcccccchhhHHHHHHH
Q psy14104 87 AMTYLLAMVCSNMALQWINYPTQ-VIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLV 143 (319)
Q Consensus 87 ~~~~~~~~~~~~~sl~~~~~~~~-~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~ 143 (319)
..++..+..+...+++.+|.+.+ .+......+.+.+.+.++++|+.++.|+.++.++
T Consensus 36 ~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 36 VVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 33567778888999999999966 5566788999999999999999999999998764
No 84
>KOG1441|consensus
Probab=96.76 E-value=0.0065 Score=55.12 Aligned_cols=141 Identities=15% Similarity=0.090 Sum_probs=103.0
Q ss_pred ccchhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHH-HHHHHHhcCCC---C--C--c
Q psy14104 7 SKRLKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAK-IMLLTFLKQGE---D--S--T 78 (319)
Q Consensus 7 ~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~-~~~~~~~~~~~---~--~--~ 78 (319)
+-++....++.+......+-.+++|.+.++. +++.+ ++.+...+.-++.+.+. .......+... . . .
T Consensus 159 ~fn~~G~i~a~~s~~~~al~~I~~~~ll~~~----~~~~~-~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~~~~~ 233 (316)
T KOG1441|consen 159 SFNLFGFISAMISNLAFALRNILSKKLLTSK----GESLN-SMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTAPWFV 233 (316)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHhhhcc----ccccC-chHHHHHhhhHHHHHHhcchHhhhcccceeeeeccccch
Confidence 3456777788888888889999999998643 23444 45566666666666665 43322211111 1 1 1
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheee
Q psy14104 79 RSVYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIY 152 (319)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~ 152 (319)
+.......+++....+...+..+..+++-+++++...+-+.+...++++++++.++.+..|.+++++|+++...
T Consensus 234 ~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~ 307 (316)
T KOG1441|consen 234 TFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSR 307 (316)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHH
Confidence 11223445577778888899999999999999999999999999999999999999999999999999998653
No 85
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.58 E-value=0.0096 Score=44.09 Aligned_cols=55 Identities=16% Similarity=0.297 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHhCchHH-HHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHH
Q psy14104 245 LSALGQFFIFLTVTEYGPLPC-SIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIV 299 (319)
Q Consensus 245 ~~~v~~~~~~~~l~~~~a~~~-si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li 299 (319)
+..++.+++..++|+.+...+ .+..-+..+.+.+.|.++|||++|+.+++|+.++
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 345566777889999888775 6666789999999999999999999999999875
No 86
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.39 E-value=0.026 Score=48.75 Aligned_cols=64 Identities=16% Similarity=0.143 Sum_probs=56.2
Q ss_pred HHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhh
Q psy14104 86 AAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVAL 149 (319)
Q Consensus 86 ~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l 149 (319)
..+.+.....+-...++|.+..+..+...+.++++.+++.++++++++..++.++.+++.|+.+
T Consensus 158 ~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 158 VGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 4445566667788999999999999999999999999999999999999999999999998764
No 87
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=96.36 E-value=0.13 Score=41.38 Aligned_cols=137 Identities=13% Similarity=0.057 Sum_probs=84.1
Q ss_pred hhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHH
Q psy14104 166 GFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVL 245 (319)
Q Consensus 166 ~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~ 245 (319)
.+..++.+.+.++-......+-++.+..+ +|....+.+...++..+....+..... +..+.. .+..|+..+. |++
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~-spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~--~~~pwW~~~G-G~l 78 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLG-SPLLASLISFLVGTVLLLILLLIKQGH-PGLAAV--ASAPWWAWIG-GLL 78 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcC-ChHHHHHHHHHHHHHHHHHHHHHhcCC-Cchhhc--cCCchHHHHc-cch
Confidence 45566666677777777777777765433 688888888888887766655543222 112211 2223444322 233
Q ss_pred HHHHHHHHHHHHHHhCchHHHHHH-hHHHHHHHHHHHHhcC----CCCchhhhhHHhHHHHhHHHHH
Q psy14104 246 SALGQFFIFLTVTEYGPLPCSIVT-TTRKFFTVLGSIIFFG----NVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 246 ~~v~~~~~~~~l~~~~a~~~si~~-~~~~v~~i~ls~~~~~----e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
+++--..-.....+.|++++..+. .-+-+.+++++.+=+. .+++...++|++++++|+++..
T Consensus 79 Ga~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 79 GAIFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred hhhhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 332222333457788877655444 5566777788876554 5799999999999999965544
No 88
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.19 E-value=0.011 Score=45.19 Aligned_cols=69 Identities=22% Similarity=0.169 Sum_probs=58.6
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccchhHHHHh-hhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhhe
Q psy14104 82 YYASAAMTYLLAMVCSNMALQWINYPTQVIG-KSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALF 150 (319)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~-~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~ 150 (319)
+|.+.=++|-.++...+..+...|.|.+.-+ ++++-++|.+.++++.+|..+++.++|+++++.|+.++
T Consensus 43 ~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 43 KYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 3444445677888888999999999877655 68999999999999999999999999999999999875
No 89
>KOG2234|consensus
Probab=96.13 E-value=0.3 Score=44.54 Aligned_cols=64 Identities=16% Similarity=0.354 Sum_probs=59.6
Q ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 244 VLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 244 ~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
+.-++.|...+.++.+.+|.+..+...+|...|.+++++++++.++..||....+...|+.+..
T Consensus 100 ~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ 163 (345)
T KOG2234|consen 100 LIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQ 163 (345)
T ss_pred HHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHh
Confidence 3456777788999999999999999999999999999999999999999999999999999887
No 90
>KOG4510|consensus
Probab=95.75 E-value=0.0035 Score=54.64 Aligned_cols=68 Identities=15% Similarity=0.267 Sum_probs=61.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 240 FLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 240 ~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
++-|+.|..|-...++++++.+-..+++++...|++++++++.+++|+.|....+|..+.+.|+++..
T Consensus 101 iLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIv 168 (346)
T KOG4510|consen 101 ILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIV 168 (346)
T ss_pred EeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEe
Confidence 34577788888888999999999999999999999999999999999999999999999999997653
No 91
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=95.65 E-value=0.12 Score=39.56 Aligned_cols=60 Identities=18% Similarity=0.352 Sum_probs=50.6
Q ss_pred HHHHHHHHHHHHHHhCchHHHHH-HhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHH
Q psy14104 246 SALGQFFIFLTVTEYGPLPCSIV-TTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFL 305 (319)
Q Consensus 246 ~~v~~~~~~~~l~~~~a~~~si~-~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~ 305 (319)
...|...+++.+++.+-+.+..+ +.+.-++|.+.|+++.+|..+...++|+++++.|+.+
T Consensus 51 Nq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~L 111 (113)
T PF10639_consen 51 NQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVAL 111 (113)
T ss_pred HHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeee
Confidence 34455677888999998887777 5888999999998888888899999999999999854
No 92
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=95.51 E-value=0.61 Score=37.17 Aligned_cols=102 Identities=16% Similarity=0.241 Sum_probs=71.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCC---CCCchhhhHHHHHHHHHHHHHHHHHHhcccchhHHHHhh-hcchHHHHH
Q psy14104 47 CMLALVFVQCVINYIYAKIMLLTFLKQG---EDSTRSVYYASAAMTYLLAMVCSNMALQWINYPTQVIGK-SAKPIPVML 122 (319)
Q Consensus 47 ~p~~l~~~~~~~~~l~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~-~~~pi~v~l 122 (319)
+|+.=+++-+..+.+.+.++....++++ .++.||+.|+ -+++......+...+...+.++..+.+. ....+..++
T Consensus 29 s~~~as~i~~~~G~i~~~i~~~~~~~~~~~~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~ 107 (138)
T PF04657_consen 29 SPLVASFISFGVGFILLLIILLITGRPSLASLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTILIVAGQLIASLL 107 (138)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcccccchhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHH
Confidence 4676777788888888776654443321 2334555555 6777778888888888888877665443 344555567
Q ss_pred HHHH----hcccccchhhHHHHHHHHHhhhh
Q psy14104 123 LGVL----LGRKSYALKKYFFVLLVVIGVAL 149 (319)
Q Consensus 123 ~~~l----~~~~~~~~~~~~~~~l~~~Gv~l 149 (319)
++.+ .-|+++++++.++++++++|+.+
T Consensus 108 iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 108 IDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 7775 45789999999999999999864
No 93
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=95.29 E-value=0.0086 Score=51.65 Aligned_cols=132 Identities=19% Similarity=0.150 Sum_probs=86.3
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHHH
Q psy14104 168 GEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLSA 247 (319)
Q Consensus 168 G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~ 247 (319)
+++.+++-++.|+.......| .+-+|.+...-+..-+.++.....++.... .++..+..-+..+..=.
T Consensus 3 ~~liaL~P~l~WGsip~v~~k----~GG~p~qQ~lGtT~GALifaiiv~~~~~p~--------~T~~~~iv~~isG~~Ws 70 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANK----FGGKPYQQTLGTTLGALIFAIIVFLFVSPE--------LTLTIFIVGFISGAFWS 70 (288)
T ss_pred hHHHHHHHHHHhcccceeeee----cCCChhHhhhhccHHHHHHHHHHheeecCc--------cchhhHHHHHHhhhHhh
Confidence 455666677888887654433 345677777666665555554443332111 11222322233333345
Q ss_pred HHHHHHHHHHHHhCchHHHHHHhH-HHHHHHHHHHHhcCCCCchhhh----hHHhHHHHhHHHHHhhcc
Q psy14104 248 LGQFFIFLTVTEYGPLPCSIVTTT-RKFFTVLGSIIFFGNVMTSRQW----IATFIVFTGLFLDSFYSS 311 (319)
Q Consensus 248 v~~~~~~~~l~~~~a~~~si~~~~-~~v~~i~ls~~~~~e~~s~~~~----iG~~li~~Gv~~~~~~~~ 311 (319)
+||...+.+++..|...+..+++- +-+-+.++|++.|||.-++.+. +..++++.|+++.++.++
T Consensus 71 ~GQ~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 71 FGQANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 789999999999999998888765 6667889999999999887654 456778889888885443
No 94
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=95.25 E-value=0.55 Score=41.00 Aligned_cols=58 Identities=17% Similarity=0.112 Sum_probs=52.6
Q ss_pred HHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhhee
Q psy14104 94 MVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFI 151 (319)
Q Consensus 94 ~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~ 151 (319)
..+...+++.+|..+..++.+..|.+-.+.+.++++|+++..||.++..++.+..=..
T Consensus 224 YsLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~ 281 (292)
T COG5006 224 YSLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGST 281 (292)
T ss_pred hHHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccc
Confidence 4578899999999999999999999999999999999999999999999988776433
No 95
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=94.61 E-value=1.2 Score=40.77 Aligned_cols=147 Identities=16% Similarity=0.106 Sum_probs=85.8
Q ss_pred hhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHH---HhCchhHHHHhhhhchHHHHHHHH
Q psy14104 165 FGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISIL---ITGEIFEFINFVNKYPSIIYQLFL 241 (319)
Q Consensus 165 ~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~~~~~~~~~~~~~~~i~~ 241 (319)
-..|+++...+.++.+.+.+=.||.. + =++|.......+-.-+..|... ...+..+.... .+.+.+....+
T Consensus 5 ii~Gii~h~iGg~~~~sfy~P~kkvk-~---WsWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~--~~~~~l~~~~l 78 (344)
T PF06379_consen 5 IILGIIFHAIGGFASGSFYVPFKKVK-G---WSWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSA--TPASTLFWTFL 78 (344)
T ss_pred HHHHHHHHHHHHHHhhhhccchhhcC-C---ccHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHh--CChhHHHHHHH
Confidence 47899999999999888877666643 2 2466655444433334445432 12233332221 22334444455
Q ss_pred HHHHHHHHHHHHHHHHHHhCch-HHHHHHhHHHHHHHHHHHHhcC-------CCCchhhhhHHhHHHHhHHHHHhhcchh
Q psy14104 242 FSVLSALGQFFIFLTVTEYGPL-PCSIVTTTRKFFTVLGSIIFFG-------NVMTSRQWIATFIVFTGLFLDSFYSSKE 313 (319)
Q Consensus 242 ~~~~~~v~~~~~~~~l~~~~a~-~~si~~~~~~v~~i~ls~~~~~-------e~~s~~~~iG~~li~~Gv~~~~~~~~~~ 313 (319)
.++.=-++.+.+-.++++.|-. ..++..-+..++..++--++.| ++-.....+|+++++.|+.+..+....|
T Consensus 79 ~G~lWGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~K 158 (344)
T PF06379_consen 79 FGVLWGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMK 158 (344)
T ss_pred HHHHHhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhh
Confidence 6665455666666777777744 2444444444444444333332 2334578899999999999998777666
Q ss_pred hhhh
Q psy14104 314 SAKR 317 (319)
Q Consensus 314 ~~~~ 317 (319)
+|+.
T Consensus 159 e~~~ 162 (344)
T PF06379_consen 159 EKEL 162 (344)
T ss_pred hhhh
Confidence 6653
No 96
>KOG2765|consensus
Probab=94.32 E-value=0.9 Score=41.90 Aligned_cols=132 Identities=14% Similarity=0.093 Sum_probs=89.5
Q ss_pred HHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHH---HHHhcCCCCCchh----hhHHHHHHH-HH
Q psy14104 20 FTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIML---LTFLKQGEDSTRS----VYYASAAMT-YL 91 (319)
Q Consensus 20 ~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~---~~~~~~~~~~~~~----~~~~~~~~~-~~ 91 (319)
..+.+.|+++.-.+.|.. ++|+++.+-|++.-+... ++.++++..+ ... +.++...|- ......++. .+
T Consensus 253 L~sA~~YavY~vllk~~~-~~eg~rvdi~lffGfvGL-fnllllwP~l~iL~~~-~~e~F~lP~~~q~~~vv~~~ligtv 329 (416)
T KOG2765|consen 253 LLSALLYAVYTVLLKRKI-GDEGERVDIQLFFGFVGL-FNLLLLWPPLIILDFF-GEERFELPSSTQFSLVVFNNLIGTV 329 (416)
T ss_pred HHHHHHHHHHHHHHHhhc-ccccccccHHHHHHHHHH-HHHHHHhHHHHHHHHh-ccCcccCCCCceeEeeeHhhHHHHH
Confidence 344455666555554443 555578887777766554 3445554222 122 222222221 122333333 46
Q ss_pred HHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeec
Q psy14104 92 LAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKD 154 (319)
Q Consensus 92 ~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 154 (319)
++-+++-+|.-.++.-..++..+.+....|+...++.++++++..++|...+++|-+++...+
T Consensus 330 vSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 330 VSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred HHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 777888999998998889999999999999999999999999999999999999999887654
No 97
>KOG1581|consensus
Probab=93.63 E-value=0.49 Score=42.32 Aligned_cols=134 Identities=11% Similarity=0.038 Sum_probs=85.9
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhc-------CCCCCchhhh
Q psy14104 10 LKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLK-------QGEDSTRSVY 82 (319)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~-------~~~~~~~~~~ 82 (319)
.....+.++-...=...+..|.++++++ +. . +..+.+.-.++..+....++...+. -+.++.-+++
T Consensus 171 ~~G~~Ll~~~L~fDgfTn~tQd~lf~~~-k~--s----~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~D 243 (327)
T KOG1581|consen 171 PIGILLLFGYLLFDGFTNATQDSLFKKY-KV--S----SLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFD 243 (327)
T ss_pred hHhHHHHHHHHHHHhhHHhHHHHHhccC-Cc--c----HhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHH
Confidence 3444444444444445667799998743 31 2 2233333333344444444321111 1234455788
Q ss_pred HHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhhe
Q psy14104 83 YASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALF 150 (319)
Q Consensus 83 ~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~ 150 (319)
.++.+.++..+..+-+.-++--..=+.+++..+.=++.++++.++++.+.++.||.++.+++.|+..=
T Consensus 244 i~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~ 311 (327)
T KOG1581|consen 244 ILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLE 311 (327)
T ss_pred HHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHH
Confidence 99999999999888777777644444455566667888999999999999999999999888888763
No 98
>KOG1580|consensus
Probab=92.17 E-value=0.33 Score=41.84 Aligned_cols=75 Identities=13% Similarity=0.021 Sum_probs=62.8
Q ss_pred chhhhHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheee
Q psy14104 78 TRSVYYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIY 152 (319)
Q Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~ 152 (319)
-.+++...++++.+++.++-+.-..+-+.-+-++...+.-.++.+.+.++++.+++.+||++..+++.|...=+.
T Consensus 239 ~~~~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~ 313 (337)
T KOG1580|consen 239 YVFWDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVV 313 (337)
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhh
Confidence 346778889999999999988888876655556667777899999999999999999999999999999876443
No 99
>KOG1582|consensus
Probab=90.97 E-value=1.5 Score=38.72 Aligned_cols=138 Identities=19% Similarity=0.179 Sum_probs=82.3
Q ss_pred hhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHHHHHHHhcC-----CCCCchhhhHH
Q psy14104 10 LKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKIMLLTFLKQ-----GEDSTRSVYYA 84 (319)
Q Consensus 10 ~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~~~~~~~~~-----~~~~~~~~~~~ 84 (319)
........|....=..-|=+||+++|-.-+++ ..++++-..++.++++..+...+.- .--..|+|.|-
T Consensus 189 ~~Gv~mIsgALl~DA~iGNvQEk~m~~~~~ss-------~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyG 261 (367)
T KOG1582|consen 189 LIGVMMISGALLADAVIGNVQEKAMKMNPASS-------SEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYG 261 (367)
T ss_pred eeeHHHHHHHHHHHHHhhHHHHHHHhhCCCCc-------ceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHH
Confidence 34445666666666677778999996653322 3345555566666665544333211 01223555553
Q ss_pred ---HHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhheeeec
Q psy14104 85 ---SAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKD 154 (319)
Q Consensus 85 ---~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 154 (319)
+.+.....+..+-..=.+.-.+.++.......--.|.+++++++.++++..-..+.++++.|+++=++++
T Consensus 262 y~~~~s~~gylG~~~VLalI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 262 YAFLFSLAGYLGIVFVLALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHHHHHHHhHhhHHHHHHHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccC
Confidence 2333322222211111122344445555555566788999999999999999999999999999988765
No 100
>KOG4314|consensus
Probab=89.42 E-value=0.26 Score=41.29 Aligned_cols=65 Identities=12% Similarity=0.317 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchh
Q psy14104 249 GQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKE 313 (319)
Q Consensus 249 ~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~ 313 (319)
.++.+..++++.+|+.++-+......+.-+++++.+||.+....++...+.+.|++.-.|.++..
T Consensus 66 aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~~ 130 (290)
T KOG4314|consen 66 ANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNEH 130 (290)
T ss_pred CCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccchh
Confidence 56778889999999999999999999999999999999999999999999999988776544443
No 101
>KOG3912|consensus
Probab=87.66 E-value=1.3 Score=39.28 Aligned_cols=64 Identities=19% Similarity=0.360 Sum_probs=55.5
Q ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 244 VLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 244 ~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
+|-..|....+.++..++|+...+.--...+++-++|..+++++++..||+|+..+..|+....
T Consensus 94 l~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg 157 (372)
T KOG3912|consen 94 LCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVG 157 (372)
T ss_pred HHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheee
Confidence 4556666777888889999988888888889999999999999999999999999999987654
No 102
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=86.31 E-value=1.5 Score=38.69 Aligned_cols=70 Identities=19% Similarity=0.155 Sum_probs=41.7
Q ss_pred HHHHHHHHHHHHHHHHhCchH-HHHHHhHHHHHHHHHHHH-hcCCC-----CchhhhhHHhHHHHhHHHHHhhcchh
Q psy14104 244 VLSALGQFFIFLTVTEYGPLP-CSIVTTTRKFFTVLGSII-FFGNV-----MTSRQWIATFIVFTGLFLDSFYSSKE 313 (319)
Q Consensus 244 ~~~~v~~~~~~~~l~~~~a~~-~si~~~~~~v~~i~ls~~-~~~e~-----~s~~~~iG~~li~~Gv~~~~~~~~~~ 313 (319)
..=+.|+.+..-.+|..|-.. ..+-+...-+.+-..|-+ +||++ -.+++++|+++++.|..++...+.+.
T Consensus 63 ~lW~~gN~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 63 ALWATGNILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred hhhhcCceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 333445555555566666433 223333344444444433 56532 45789999999999999998765554
No 103
>KOG2922|consensus
Probab=84.78 E-value=0.33 Score=43.74 Aligned_cols=124 Identities=14% Similarity=0.110 Sum_probs=84.2
Q ss_pred chhhHHHHHHHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHH
Q psy14104 164 NFGFGEFLLILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFS 243 (319)
Q Consensus 164 ~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~ 243 (319)
++..|..+.+.|.++-+...+.+||-.+|.+.+. .-.++-. ..+. .++ .||.-++
T Consensus 18 d~~~G~~LaissS~~Ig~sfilkKkgl~r~~~~~-------------------~ra~~gg--~~yl-~~~-~Ww~G~l-- 72 (335)
T KOG2922|consen 18 DNIIGLVLAISSSIFIGSSFILKKKGLKRAGASG-------------------LRAGEGG--YGYL-KEP-LWWAGML-- 72 (335)
T ss_pred CceeeeeehhhccEEEeeehhhhHHHHHHHhhhc-------------------ccccCCC--cchh-hhH-HHHHHHH--
Confidence 3578999999888888888888877665422100 0001100 0011 122 3433222
Q ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchh
Q psy14104 244 VLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKE 313 (319)
Q Consensus 244 ~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~ 313 (319)
+-.+|...-|.+..-.+++-.+..+.+.-+.+.+++..+++|.++....+|++++++|...-....+++
T Consensus 73 -tm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e 141 (335)
T KOG2922|consen 73 -TMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKE 141 (335)
T ss_pred -HHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCcc
Confidence 345566666667788888889999999999999999999999999999999999999986654344443
No 104
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=81.06 E-value=13 Score=29.88 Aligned_cols=105 Identities=14% Similarity=0.127 Sum_probs=63.7
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHhcCCC----CCchhhhHHHHHHHHHHHHHHHHHHhcccchh-HHHHhhhcchHHH
Q psy14104 46 TCMLALVFVQCVINYIYAKIMLLTFLKQGE----DSTRSVYYASAAMTYLLAMVCSNMALQWINYP-TQVIGKSAKPIPV 120 (319)
Q Consensus 46 ~~p~~l~~~~~~~~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~sl~~~~~~-~~~i~~~~~pi~v 120 (319)
+.|..=.++-+.++.+.+.++.....+++. .+.||+.+. -|++.......+-....-+.++ +..+.-+...+.-
T Consensus 32 ~spl~As~isf~vGt~~L~~l~l~~~~~~~~a~~~~~pwW~~~-GG~lGa~~vt~s~~l~p~lGa~~t~~l~i~gQli~g 110 (150)
T COG3238 32 GSPLLASLISFLVGTVLLLILLLIKQGHPGLAAVASAPWWAWI-GGLLGAIFVTSSILLAPRLGAATTIALVIAGQLIMG 110 (150)
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHhcCCCchhhccCCchHHHH-ccchhhhhhhhhHHhccchhHHHHHHHHHHHHHHHH
Confidence 357777777788877777665544322222 233555554 3344444444444444444444 4445555666667
Q ss_pred HHHHHH-hc---ccccchhhHHHHHHHHHhhhhee
Q psy14104 121 MLLGVL-LG---RKSYALKKYFFVLLVVIGVALFI 151 (319)
Q Consensus 121 ~l~~~l-~~---~~~~~~~~~~~~~l~~~Gv~l~~ 151 (319)
++++.+ ++ ++++++.++++++++.+|+.+.-
T Consensus 111 lliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~ 145 (150)
T COG3238 111 LLIDHFGWFGVPKRPLNLPRILGILLVLAGILLAR 145 (150)
T ss_pred HHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhc
Confidence 777766 22 58899999999999999966543
No 105
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=80.94 E-value=9.3 Score=32.92 Aligned_cols=70 Identities=14% Similarity=0.199 Sum_probs=56.8
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccchhHHHHhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhhee
Q psy14104 82 YYASAAMTYLLAMVCSNMALQWINYPTQVIGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFI 151 (319)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~sl~~~~~~~~~i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~ 151 (319)
...+-|++.++..+++-++++-++.+++.+..+..-.+..+-+.++++++.++..+.++.+.+...++..
T Consensus 226 am~ISgl~svgiSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYa 295 (309)
T COG5070 226 AMFISGLCSVGISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYA 295 (309)
T ss_pred HHHHHHHHHhhhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHH
Confidence 4456667778888899999999999999999999888888989999999988888888777765444433
No 106
>KOG4831|consensus
Probab=80.10 E-value=3 Score=31.26 Aligned_cols=70 Identities=17% Similarity=0.115 Sum_probs=55.1
Q ss_pred hHHHHHHHHHHHHHHHHHHhcccchhHHH-HhhhcchHHHHHHHHHhcccccchhhHHHHHHHHHhhhhee
Q psy14104 82 YYASAAMTYLLAMVCSNMALQWINYPTQV-IGKSAKPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALFI 151 (319)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~sl~~~~~~~~~-i~~~~~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~ 151 (319)
+|.+.=+++-.++.+.+.-++..|.+.++ +..+++-.++.+.+..+..|-..++..++..++++|+.+.+
T Consensus 54 ~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 54 EYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred HHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 45555556777788888888888877665 55667888999999988888888888999999999987754
No 107
>KOG1444|consensus
Probab=78.66 E-value=37 Score=30.88 Aligned_cols=135 Identities=15% Similarity=0.154 Sum_probs=81.9
Q ss_pred HHHHHHHHHHHHhhhHHHHHHHHhhcCCCh-hhHHHHhHHHHHHHHHHHHHHhCchhHHHHhhhhchHHHHHHHHHHHHH
Q psy14104 168 GEFLLILSLLMDGLTGAVQERMKSESQTKS-GHMMVAMNKWSCLFLGISILITGEIFEFINFVNKYPSIIYQLFLFSVLS 246 (319)
Q Consensus 168 G~~l~~~s~~~~a~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~i~~~~~~~ 246 (319)
...-++..++++....+..|....+++.+. .-++.++++.+.+.....-.. + ..+...+....+..|..+-. .-
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~-~-lv~~~~l~~~~~kk~~P~~~---lf 87 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL-G-LVNFRPLDLRTAKKWFPVSL---LF 87 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh-c-eeecCCcChHHHHHHccHHH---HH
Confidence 344444555556666777888777776532 334457777766554332211 1 00000010112222322111 01
Q ss_pred HHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 247 ALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 247 ~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
+...+.-...+|+.+-....+.-...++.+.+...+++|..++...|.......+|...+.
T Consensus 88 ~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 88 VGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred HHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 1111223356888888899999999999999999999999999999999999999887764
No 108
>KOG2766|consensus
Probab=78.17 E-value=0.84 Score=39.93 Aligned_cols=72 Identities=8% Similarity=0.078 Sum_probs=60.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 236 IYQLFLFSVLSALGQFFIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 236 ~~~i~~~~~~~~v~~~~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
|..-+++++.-+=++++...+.++++-+......+-..+.-+++++++++...-+.++.|.+++++|+....
T Consensus 78 ~~hYilla~~DVEaNy~vV~AyQyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV 149 (336)
T KOG2766|consen 78 WRHYILLAFVDVEANYFVVKAYQYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVV 149 (336)
T ss_pred HHHhhheeEEeecccEEEeeehhhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEE
Confidence 444455565666677777888999999999999999999999999999999999999999999999987654
No 109
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=74.59 E-value=5.7 Score=29.87 Aligned_cols=36 Identities=17% Similarity=0.310 Sum_probs=31.1
Q ss_pred HHHHHHHHhcccccchhhHHHHHHHHHhhhheeeec
Q psy14104 119 PVMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKD 154 (319)
Q Consensus 119 ~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 154 (319)
...+..+.+-++|+++.++++..++.+|+.++...+
T Consensus 70 ~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~P 105 (107)
T PF02694_consen 70 ASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAP 105 (107)
T ss_pred HHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecC
Confidence 345778889999999999999999999999988654
No 110
>PRK02237 hypothetical protein; Provisional
Probab=74.31 E-value=5.6 Score=29.95 Aligned_cols=35 Identities=11% Similarity=0.187 Sum_probs=30.3
Q ss_pred HHHHHHHhcccccchhhHHHHHHHHHhhhheeeec
Q psy14104 120 VMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKD 154 (319)
Q Consensus 120 v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 154 (319)
..+..+.+-++|+++.++++..++.+|+.++...+
T Consensus 73 Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~p 107 (109)
T PRK02237 73 SLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAP 107 (109)
T ss_pred HHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecC
Confidence 34678889999999999999999999999887643
No 111
>PRK02237 hypothetical protein; Provisional
Probab=71.61 E-value=41 Score=25.40 Aligned_cols=44 Identities=14% Similarity=0.060 Sum_probs=38.9
Q ss_pred HHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 264 PCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 264 ~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
..+..+-+-.+.++++++.+-|++++..-++|.++++.|+.+-.
T Consensus 61 vYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 61 VYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIM 104 (109)
T ss_pred HHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhe
Confidence 46667777888999999999999999999999999999987765
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=69.63 E-value=33 Score=25.88 Aligned_cols=44 Identities=14% Similarity=0.098 Sum_probs=38.7
Q ss_pred HHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHH
Q psy14104 264 PCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDS 307 (319)
Q Consensus 264 ~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~ 307 (319)
..+..+-.-.+.++++++.+-|++++..-++|.++++.|+.+-.
T Consensus 59 vYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 59 VYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIIL 102 (107)
T ss_pred HHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheE
Confidence 45666777788999999999999999999999999999987755
No 113
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=66.61 E-value=79 Score=26.73 Aligned_cols=26 Identities=8% Similarity=0.163 Sum_probs=19.5
Q ss_pred HHHHHHhcCCCCchhhhhHHhHHHHh
Q psy14104 277 VLGSIIFFGNVMTSRQWIATFIVFTG 302 (319)
Q Consensus 277 i~ls~~~~~e~~s~~~~iG~~li~~G 302 (319)
-.+|..+++|..=+...+|..+..+=
T Consensus 133 ~~iG~~L~t~y~l~fe~~silLLvAm 158 (198)
T PRK06638 133 KAIGILLFTDYLLPFELASVLLLVAM 158 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34577888888888999998885433
No 114
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=65.90 E-value=7.3 Score=29.22 Aligned_cols=29 Identities=10% Similarity=0.253 Sum_probs=24.5
Q ss_pred HHHHHHhcCCCCchhhhhHHhHHHHhHHH
Q psy14104 277 VLGSIIFFGNVMTSRQWIATFIVFTGLFL 305 (319)
Q Consensus 277 i~ls~~~~~e~~s~~~~iG~~li~~Gv~~ 305 (319)
+..+++.++|++++.+..|.++++++++.
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~f 105 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYF 105 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhe
Confidence 35667889999999999999999888653
No 115
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=60.81 E-value=70 Score=24.10 Aligned_cols=35 Identities=9% Similarity=0.067 Sum_probs=27.6
Q ss_pred chHHHHHHHHHhcccccchhhHHHHHHHHHhhhhe
Q psy14104 116 KPIPVMLLGVLLGRKSYALKKYFFVLLVVIGVALF 150 (319)
Q Consensus 116 ~pi~v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~ 150 (319)
+...-+.++.+++||++++....+.++++.++.++
T Consensus 72 tL~vF~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 72 TLVVFAPFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred hhheeHHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 34444677889999999999999998887776653
No 116
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=60.71 E-value=12 Score=27.90 Aligned_cols=35 Identities=9% Similarity=0.101 Sum_probs=29.8
Q ss_pred HHHHHHHhcccccchhhHHHHHHHHHhhhheeeec
Q psy14104 120 VMLLGVLLGRKSYALKKYFFVLLVVIGVALFIYKD 154 (319)
Q Consensus 120 v~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~~~~~ 154 (319)
..+...+.-++|+++.++++..++.+|+.++...+
T Consensus 72 sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~p 106 (109)
T COG1742 72 SLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGP 106 (109)
T ss_pred HHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCC
Confidence 34667778899999999999999999998887654
No 117
>PF04971 Lysis_S: Lysis protein S ; InterPro: IPR007054 The lysis S protein is a cytotoxic protein forming holes in membranes causing cell lysis. The action of Lysis S is independent of the proportion of acidic phospholipids in the membrane [].
Probab=60.24 E-value=8.1 Score=26.47 Aligned_cols=31 Identities=13% Similarity=0.347 Sum_probs=13.8
Q ss_pred CCCchhhhh--HHhH----HHHhHHHHHhhcchhhhh
Q psy14104 286 NVMTSRQWI--ATFI----VFTGLFLDSFYSSKESAK 316 (319)
Q Consensus 286 e~~s~~~~i--G~~l----i~~Gv~~~~~~~~~~~~~ 316 (319)
+.+++.||. |++- .+.+.+...|++.|+.||
T Consensus 26 d~~sp~qW~aIGvi~gi~~~~lt~ltN~YFK~k~drr 62 (68)
T PF04971_consen 26 DQFSPSQWAAIGVIGGIFFGLLTYLTNLYFKIKEDRR 62 (68)
T ss_pred hccCcccchhHHHHHHHHHHHHHHHhHhhhhhhHhhh
Confidence 455555554 4333 334434445454444333
No 118
>PF15099 PIRT: Phosphoinositide-interacting protein family
Probab=59.40 E-value=7.7 Score=30.01 Aligned_cols=8 Identities=0% Similarity=0.127 Sum_probs=3.6
Q ss_pred HHhHHHHh
Q psy14104 295 ATFIVFTG 302 (319)
Q Consensus 295 G~~li~~G 302 (319)
|..+...|
T Consensus 91 GLmlL~~~ 98 (129)
T PF15099_consen 91 GLMLLACS 98 (129)
T ss_pred HHHHHHhh
Confidence 44444444
No 119
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=55.82 E-value=3.8 Score=36.35 Aligned_cols=98 Identities=9% Similarity=0.036 Sum_probs=0.0
Q ss_pred HhcccchhHHHHhhhcchHHHHHHH-HHhcccccchhh-HHHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHHHHH
Q psy14104 100 ALQWINYPTQVIGKSAKPIPVMLLG-VLLGRKSYALKK-YFFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLILSLL 177 (319)
Q Consensus 100 sl~~~~~~~~~i~~~~~pi~v~l~~-~l~~~~~~~~~~-~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~s~~ 177 (319)
-+.-.+-+..+++.+.+.+.++++- .++||+|+-... .++++++++-..+.+.-.... ..-+.|+++.++..+
T Consensus 43 imsd~t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPLGlLCiilimi~lLv~~L~tLtG-----Q~LF~Gi~~l~l~~l 117 (381)
T PF05297_consen 43 IMSDLTQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPLGLLCIILIMIVLLVSMLWTLTG-----QTLFVGIVILFLCCL 117 (381)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhccccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcchHHHHHHHHHHHHHHHHHHhhc-----cHHHHHHHHHHHHHH
Confidence 3333444555566666555554443 445666654443 333333333333322211110 123567766555444
Q ss_pred HHhhhHHHHHHHHhhcCCChhhHHHH
Q psy14104 178 MDGLTGAVQERMKSESQTKSGHMMVA 203 (319)
Q Consensus 178 ~~a~~~~~~~~~~~~~~~~~~~~~~~ 203 (319)
..-..+.| -.+.++++.+-++++.+
T Consensus 118 LaL~vW~Y-m~lLr~~GAs~WtiLaF 142 (381)
T PF05297_consen 118 LALGVWFY-MWLLRELGASFWTILAF 142 (381)
T ss_dssp --------------------------
T ss_pred HHHHHHHH-HHHHHHhhhHHHHHHHH
Confidence 33333344 33667778777766543
No 120
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=55.06 E-value=16 Score=27.08 Aligned_cols=29 Identities=10% Similarity=0.244 Sum_probs=25.2
Q ss_pred HHHHHHhcCCCCchhhhhHHhHHHHhHHH
Q psy14104 277 VLGSIIFFGNVMTSRQWIATFIVFTGLFL 305 (319)
Q Consensus 277 i~ls~~~~~e~~s~~~~iG~~li~~Gv~~ 305 (319)
+.+|++.++||+.+.++.|.+++.+|+..
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~f 112 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYF 112 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHH
Confidence 34678899999999999999999998765
No 121
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=53.47 E-value=13 Score=25.40 Aligned_cols=26 Identities=23% Similarity=0.390 Sum_probs=20.1
Q ss_pred hhhhHHhHHHHhHHHHHhhcchhhhh
Q psy14104 291 RQWIATFIVFTGLFLDSFYSSKESAK 316 (319)
Q Consensus 291 ~~~iG~~li~~Gv~~~~~~~~~~~~~ 316 (319)
.-.+|+.+++.|.++|..++|++..+
T Consensus 5 ~iLi~ICVaii~lIlY~iYnr~~~~q 30 (68)
T PF05961_consen 5 FILIIICVAIIGLILYGIYNRKKTTQ 30 (68)
T ss_pred HHHHHHHHHHHHHHHHHHHhcccccC
Confidence 34578888999999999888776553
No 122
>PF02439 Adeno_E3_CR2: Adenovirus E3 region protein CR2; InterPro: IPR003470 Early region 3 (E3) of human adenoviruses (Ads) codes for proteins that appear to control viral interactions with the host []. This region called CR1 (conserved region 1) [] is found three times in Human adenovirus 19 (a subgroup D adenovirus) 49 kDa protein in the E3 region. CR1 is also found in the 20.1 Kd protein of subgroup B adenoviruses. The function of this 80 amino acid region is unknown. This region is probably a divergent immunoglobulin domain.
Probab=49.51 E-value=16 Score=22.00 Aligned_cols=22 Identities=14% Similarity=0.199 Sum_probs=14.6
Q ss_pred hhHHhHHHHhHHHHHhhcchhhh
Q psy14104 293 WIATFIVFTGLFLDSFYSSKESA 315 (319)
Q Consensus 293 ~iG~~li~~Gv~~~~~~~~~~~~ 315 (319)
.+|++++..-+++|. ...||.|
T Consensus 13 ~vg~~iiii~~~~Ya-Ccykk~~ 34 (38)
T PF02439_consen 13 VVGMAIIIICMFYYA-CCYKKHR 34 (38)
T ss_pred HHHHHHHHHHHHHHH-HHHcccc
Confidence 367788888888887 4444443
No 123
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=47.83 E-value=15 Score=33.11 Aligned_cols=135 Identities=12% Similarity=0.031 Sum_probs=66.1
Q ss_pred HHHHHHHhhhHHHHHHHHhhcCCChhhHHHHhHHHHHHH-HHHHHHHhCchh----HHHHhh----hhchHHHHHHHHHH
Q psy14104 173 ILSLLMDGLTGAVQERMKSESQTKSGHMMVAMNKWSCLF-LGISILITGEIF----EFINFV----NKYPSIIYQLFLFS 243 (319)
Q Consensus 173 ~~s~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~----~~~~~~----~~~~~~~~~i~~~~ 243 (319)
+.+++||+.....+|-.-++... | +..++=..++.++ .++..+-.|+.- +..++. +.++..+...+.-|
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR~-~-qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGRL-P-QHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCCc-c-ceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 35678888888877766554322 1 2233333333332 222233333221 112222 22222232333334
Q ss_pred HHHHHHHHHHHHHHHHhCchHHHHHHh-HHHHHHHHHHHHhcCCCCc--hhhhhHHhHHHHhHHHHHhhc
Q psy14104 244 VLSALGQFFIFLTVTEYGPLPCSIVTT-TRKFFTVLGSIIFFGNVMT--SRQWIATFIVFTGLFLDSFYS 310 (319)
Q Consensus 244 ~~~~v~~~~~~~~l~~~~a~~~si~~~-~~~v~~i~ls~~~~~e~~s--~~~~iG~~li~~Gv~~~~~~~ 310 (319)
+.--+++++..+++...|-..+-+++. +.-++.+++.++ .+++.+ ..-+.|++++++.+++.....
T Consensus 80 vvfnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n~a~iLF~GV~cf~iAI~lga~ah 148 (336)
T PF07168_consen 80 VVFNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKINRAEILFPGVACFLIAIILGAAAH 148 (336)
T ss_pred HhhhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCCCceEEEccHHHHHHHHHHHHHHH
Confidence 455567888777777777655544442 112223333332 234444 355678888888887766443
No 124
>KOG1583|consensus
Probab=47.30 E-value=12 Score=33.42 Aligned_cols=47 Identities=17% Similarity=0.383 Sum_probs=39.3
Q ss_pred hHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcchhhhh
Q psy14104 270 TTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSKESAK 316 (319)
Q Consensus 270 ~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~~~~~ 316 (319)
.-.++.++.+|+++.|.+.+..|+...+++-+|+++.++.+.+.-+.
T Consensus 99 sgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 99 SGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred cCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 34467788899999999999999999999999999988776654444
No 125
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=47.22 E-value=1.7e+02 Score=24.47 Aligned_cols=27 Identities=0% Similarity=-0.030 Sum_probs=20.1
Q ss_pred HHHHHHhcCCCCchhhhhHHhHHHHhH
Q psy14104 277 VLGSIIFFGNVMTSRQWIATFIVFTGL 303 (319)
Q Consensus 277 i~ls~~~~~e~~s~~~~iG~~li~~Gv 303 (319)
-.+|..++.|..-+....|..+..+=+
T Consensus 132 ~~iG~~Lyt~Y~l~fe~~s~lLLvAmI 158 (186)
T MTH00057 132 EVLGRVLYTDYYYLFILASFILLVAMI 158 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345778888888899999998864433
No 126
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.73 E-value=31 Score=25.57 Aligned_cols=30 Identities=13% Similarity=0.212 Sum_probs=26.1
Q ss_pred HHHHHHhcccccchhhHHHHHHHHHhhhhe
Q psy14104 121 MLLGVLLGRKSYALKKYFFVLLVVIGVALF 150 (319)
Q Consensus 121 ~l~~~l~~~~~~~~~~~~~~~l~~~Gv~l~ 150 (319)
..++.+.+||++++..+.+.+++..|+.++
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHh
Confidence 467889999999999999999888888765
No 127
>cd01324 cbb3_Oxidase_CcoQ Cytochrome cbb oxidase CcoQ. Cytochrome cbb3 oxidase, the terminal oxidase in the respiratory chains of proteobacteria, is a multi-chain transmembrane protein located in the cell membrane. Like other cytochrome oxidases, it catalyzes the reduction of O2 and simultaneously pumps protons across the membrane. Found exclusively in proteobacteria, cbb3 is believed to be a modern enzyme that has evolved independently to perform a specialized function in microaerobic energy metabolism. The cbb3 operon contains four genes (ccoNOQP or fixNOQP), with ccoN coding for subunit I. Instead of a CuA-containing subunit II analogous to other cytochrome oxidases, cbb3 utilizes subunits ccoO and ccoP, which contain one and two hemes, respectively, to transfer electrons to the binuclear center. ccoQ, the fourth subunit, is a single transmembrane helix protein. It has been shown to protect the core complex from proteolytic degradation by serine proteases. See cd00919, cd01322
Probab=45.29 E-value=21 Score=22.72 Aligned_cols=20 Identities=20% Similarity=0.395 Sum_probs=14.4
Q ss_pred HhHHHHhHHHHHhhcchhhh
Q psy14104 296 TFIVFTGLFLDSFYSSKESA 315 (319)
Q Consensus 296 ~~li~~Gv~~~~~~~~~~~~ 315 (319)
..+++.|++++.+++++|++
T Consensus 19 ~~~~Figiv~wa~~p~~k~~ 38 (48)
T cd01324 19 LALFFLGVVVWAFRPGRKKA 38 (48)
T ss_pred HHHHHHHHHHHHhCCCcchh
Confidence 56789999999965555443
No 128
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=43.83 E-value=20 Score=22.72 Aligned_cols=19 Identities=16% Similarity=0.548 Sum_probs=11.7
Q ss_pred HhHHHHhHHHHHhhcchhhh
Q psy14104 296 TFIVFTGLFLDSFYSSKESA 315 (319)
Q Consensus 296 ~~li~~Gv~~~~~~~~~~~~ 315 (319)
..+++.|++++.+ ++++|+
T Consensus 18 ~~~~F~gi~~w~~-~~~~k~ 36 (49)
T PF05545_consen 18 FFVFFIGIVIWAY-RPRNKK 36 (49)
T ss_pred HHHHHHHHHHHHH-cccchh
Confidence 3456778888885 444333
No 129
>PRK11357 frlA putative fructoselysine transporter; Provisional
Probab=43.20 E-value=3e+02 Score=26.15 Aligned_cols=22 Identities=23% Similarity=0.416 Sum_probs=16.2
Q ss_pred hHHhHHHHhHHHHHhhcchhhh
Q psy14104 294 IATFIVFTGLFLDSFYSSKESA 315 (319)
Q Consensus 294 iG~~li~~Gv~~~~~~~~~~~~ 315 (319)
.|..+++.|+.+|.++++|+||
T Consensus 419 ~~~~~~~~g~~~y~~~~~~~~~ 440 (445)
T PRK11357 419 CAVIVIATGLPAYAFWAKRSRQ 440 (445)
T ss_pred HHHHHHHHhhhHHhheechhhh
Confidence 5788888999888766655444
No 130
>PF05393 Hum_adeno_E3A: Human adenovirus early E3A glycoprotein; InterPro: IPR008652 This family consists of several early glycoproteins (E3A), from human adenovirus type 2.; GO: 0016021 integral to membrane
Probab=42.17 E-value=23 Score=25.56 Aligned_cols=26 Identities=15% Similarity=0.133 Sum_probs=14.3
Q ss_pred hhHHhHH-HHhHHHHHhhcchhhhhhc
Q psy14104 293 WIATFIV-FTGLFLDSFYSSKESAKRR 318 (319)
Q Consensus 293 ~iG~~li-~~Gv~~~~~~~~~~~~~~~ 318 (319)
|.-++++ +.-+++|..-.++|||.||
T Consensus 37 ~lvI~~iFil~VilwfvCC~kRkrsRr 63 (94)
T PF05393_consen 37 FLVICGIFILLVILWFVCCKKRKRSRR 63 (94)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhccC
Confidence 3333333 3334556556777777776
No 131
>TIGR00739 yajC preprotein translocase, YajC subunit. While this protein is part of the preprotein translocase in Escherichia coli, it is not essential for viability or protein secretion. The N-terminus region contains a predicted membrane-spanning region followed by a region consisting almost entirely of residues with charged (acidic, basic, or zwitterionic) side chains. This small protein is about 100 residues in length, and is restricted to bacteria; however, this protein is absent from some lineages, including spirochetes and Mycoplasmas.
Probab=42.15 E-value=17 Score=26.22 Aligned_cols=21 Identities=5% Similarity=0.189 Sum_probs=9.0
Q ss_pred hHHHHhHHHHHhhcchhhhhh
Q psy14104 297 FIVFTGLFLDSFYSSKESAKR 317 (319)
Q Consensus 297 ~li~~Gv~~~~~~~~~~~~~~ 317 (319)
.+++.++++...++++|||++
T Consensus 9 ~vv~~~i~yf~~~rpqkK~~k 29 (84)
T TIGR00739 9 LVLIFLIFYFLIIRPQRKRRK 29 (84)
T ss_pred HHHHHHHHHHheechHHHHHH
Confidence 334444444443444444443
No 132
>PF02673 BacA: Bacitracin resistance protein BacA; InterPro: IPR003824 This is a family of small, highly hydrophobic proteins. Over-expression of this protein in Escherichia coli is associated with bacitracin resistance [], and the protein was originally proposed to be an undecaprenol kinase called bacA. BacA protein, however, does not show undecaprenol phosphokinase activity []. It is now known to be an undecaprenyl pyrophosphate phosphatase (3.6.1.27 from EC) and is renamed UppP. It is not the only protein associated with bacitracin resistance [, ].; GO: 0050380 undecaprenyl-diphosphatase activity, 0016311 dephosphorylation, 0016020 membrane
Probab=40.28 E-value=2.6e+02 Score=24.72 Aligned_cols=47 Identities=15% Similarity=0.012 Sum_probs=25.7
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHhc--CCCCCchhhhHHHHHHHHHHHH
Q psy14104 47 CMLALVFVQCVINYIYAKIMLLTFLK--QGEDSTRSVYYASAAMTYLLAM 94 (319)
Q Consensus 47 ~p~~l~~~~~~~~~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 94 (319)
.|. .+..-.++..++++..-+..++ ++.++.++++-+.+|++...+.
T Consensus 110 ~~~-~v~~~Li~~g~lL~~~~~~~~~~~~~~~~~~~~dal~iGl~Q~lAl 158 (259)
T PF02673_consen 110 SPL-VVAIALIITGLLLWLADRLKRKGRKDEEDITFKDALIIGLAQGLAL 158 (259)
T ss_pred chH-HHHHHHHHHHHHHHHHHHHccCCCCCcccCCHHHHHHHHHHHHccc
Confidence 344 3444444555554443332222 3445667888888888766553
No 133
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=40.24 E-value=30 Score=27.14 Aligned_cols=17 Identities=0% Similarity=0.153 Sum_probs=7.8
Q ss_pred HHHHHhHHHHHHHHHHH
Q psy14104 265 CSIVTTTRKFFTVLGSI 281 (319)
Q Consensus 265 ~si~~~~~~v~~i~ls~ 281 (319)
.+.+.++-|++.++++.
T Consensus 70 aa~l~Y~lPll~li~g~ 86 (135)
T PF04246_consen 70 AAFLVYLLPLLALIAGA 86 (135)
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 33344444555555444
No 134
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=37.98 E-value=54 Score=26.20 Aligned_cols=25 Identities=12% Similarity=0.115 Sum_probs=12.5
Q ss_pred HhCchHHHHHHhHHHHHHHHHHHHh
Q psy14104 259 EYGPLPCSIVTTTRKFFTVLGSIIF 283 (319)
Q Consensus 259 ~~~a~~~si~~~~~~v~~i~ls~~~ 283 (319)
.-+....+.+.++-|.++++++.++
T Consensus 71 EkslL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 71 EKSLLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHH
Confidence 3344444555555555555555444
No 135
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=37.78 E-value=1.2e+02 Score=19.85 Aligned_cols=44 Identities=18% Similarity=0.206 Sum_probs=28.9
Q ss_pred hHHHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHHHHHHHhhhHHHHHHHHh
Q psy14104 136 KYFFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLILSLLMDGLTGAVQERMKS 191 (319)
Q Consensus 136 ~~~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~ 191 (319)
..++..++++|+++...++. |.+..+.+....|....+.++..+
T Consensus 5 ~v~G~~lv~~Gii~~~lPGp------------G~l~i~~GL~iLa~ef~wArr~l~ 48 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPLPGP------------GLLVIFLGLAILATEFPWARRLLR 48 (53)
T ss_pred hhHHHHHHHHHHHhhcCCCC------------cHHHHHHHHHHHHHhhHHHHHHHH
Confidence 46788889999998876542 555555566666665555555543
No 136
>PHA03049 IMV membrane protein; Provisional
Probab=35.82 E-value=34 Score=23.26 Aligned_cols=25 Identities=20% Similarity=0.418 Sum_probs=19.2
Q ss_pred hhhHHhHHHHhHHHHHhhcchhhhh
Q psy14104 292 QWIATFIVFTGLFLDSFYSSKESAK 316 (319)
Q Consensus 292 ~~iG~~li~~Gv~~~~~~~~~~~~~ 316 (319)
-.+++..++.|.++|..++|++..+
T Consensus 6 ~l~iICVaIi~lIvYgiYnkk~~~q 30 (68)
T PHA03049 6 ILVIICVVIIGLIVYGIYNKKTTTS 30 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccC
Confidence 4567888899999999888775443
No 137
>COG2116 FocA Formate/nitrite family of transporters [Inorganic ion transport and metabolism]
Probab=35.59 E-value=2.9e+02 Score=24.64 Aligned_cols=28 Identities=18% Similarity=0.204 Sum_probs=17.6
Q ss_pred ccccchhhHHHHHHHHHhhhheeeecCC
Q psy14104 129 RKSYALKKYFFVLLVVIGVALFIYKDGK 156 (319)
Q Consensus 129 ~~~~~~~~~~~~~l~~~Gv~l~~~~~~~ 156 (319)
++.....+.++.+.--.|..++...+++
T Consensus 57 ~~~~~~~~lvg~~~F~~GLilVv~~g~E 84 (265)
T COG2116 57 GAPGGLAKLVGGLVFSLGLILVVIAGSE 84 (265)
T ss_pred CCCcchHHHHHHHHHHHHHHHhhhhCcc
Confidence 3444456667666666787777765544
No 138
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=33.69 E-value=28 Score=31.04 Aligned_cols=25 Identities=20% Similarity=0.301 Sum_probs=19.6
Q ss_pred CchhhhhHHhHHHHhHHHHHhhcch
Q psy14104 288 MTSRQWIATFIVFTGLFLDSFYSSK 312 (319)
Q Consensus 288 ~s~~~~iG~~li~~Gv~~~~~~~~~ 312 (319)
+|..|+++..+++.|+.+..+.+|+
T Consensus 235 ls~~Q~~sl~~i~~g~~~~~~~~~~ 259 (269)
T PRK12437 235 LRIAQVISIPLIIIGIILIIYRRKK 259 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc
Confidence 7999999999999998776533333
No 139
>PRK00052 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=33.27 E-value=32 Score=30.62 Aligned_cols=22 Identities=18% Similarity=0.298 Sum_probs=18.7
Q ss_pred CchhhhhHHhHHHHhHHHHHhh
Q psy14104 288 MTSRQWIATFIVFTGLFLDSFY 309 (319)
Q Consensus 288 ~s~~~~iG~~li~~Gv~~~~~~ 309 (319)
+|..|+++..+++.|+.+..+.
T Consensus 237 ls~~Q~isl~~~~~gi~~~~~~ 258 (269)
T PRK00052 237 LTMGQILSIPMILLGIILLIWA 258 (269)
T ss_pred cCHHHHHHHHHHHHHHHHHHHH
Confidence 6999999999999998776533
No 140
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=32.79 E-value=23 Score=21.59 Aligned_cols=17 Identities=29% Similarity=0.540 Sum_probs=9.1
Q ss_pred HHhHHHHhHHHHHhhcc
Q psy14104 295 ATFIVFTGLFLDSFYSS 311 (319)
Q Consensus 295 G~~li~~Gv~~~~~~~~ 311 (319)
|.++++.+.+++.+|++
T Consensus 22 ~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 22 GVIIIVLGAFLFFWYRR 38 (40)
T ss_pred HHHHHHHHHHhheEEec
Confidence 44555566666654443
No 141
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=31.07 E-value=63 Score=20.07 Aligned_cols=17 Identities=24% Similarity=0.352 Sum_probs=8.6
Q ss_pred chhhhhHHhHHHHhHHH
Q psy14104 289 TSRQWIATFIVFTGLFL 305 (319)
Q Consensus 289 s~~~~iG~~li~~Gv~~ 305 (319)
+|..++=.++++.|++.
T Consensus 3 ~wlt~iFsvvIil~If~ 19 (49)
T PF11044_consen 3 TWLTTIFSVVIILGIFA 19 (49)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 45555555555555533
No 142
>PRK05585 yajC preprotein translocase subunit YajC; Validated
Probab=30.22 E-value=38 Score=25.58 Aligned_cols=21 Identities=14% Similarity=0.347 Sum_probs=8.7
Q ss_pred HhHHHHhHHHHHhhcchhhhh
Q psy14104 296 TFIVFTGLFLDSFYSSKESAK 316 (319)
Q Consensus 296 ~~li~~Gv~~~~~~~~~~~~~ 316 (319)
..+++.++++...++++|||+
T Consensus 23 ~lvii~~i~yf~~~RpqkK~~ 43 (106)
T PRK05585 23 PLVVFFAIFYFLIIRPQQKRQ 43 (106)
T ss_pred HHHHHHHHHHHHhccHHHHHH
Confidence 334444444333344444443
No 143
>PF11431 Transport_MerF: Membrane transport protein MerF; InterPro: IPR021091 This entry represents Mercury ion transport protein MerF, which has a core helix-loop-helix domain. It also has two vicinal pairs of cysteine residues which are involved in the transport of Hg(II) across the membrane and are exposed to the cytoplasm []. ; PDB: 1WAZ_A 2LJ2_A 2H3O_A.
Probab=29.22 E-value=35 Score=21.40 Aligned_cols=19 Identities=21% Similarity=0.527 Sum_probs=12.9
Q ss_pred HhHHHHhHHHHHhhcchhh
Q psy14104 296 TFIVFTGLFLDSFYSSKES 314 (319)
Q Consensus 296 ~~li~~Gv~~~~~~~~~~~ 314 (319)
...++.|+.+|..++++|+
T Consensus 27 aLa~fi~lt~yal~r~~~~ 45 (46)
T PF11431_consen 27 ALAVFIGLTIYALWRRRRK 45 (46)
T ss_dssp THHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhcc
Confidence 4557788888887655544
No 144
>PF14316 DUF4381: Domain of unknown function (DUF4381)
Probab=27.88 E-value=30 Score=27.57 Aligned_cols=31 Identities=13% Similarity=0.133 Sum_probs=14.6
Q ss_pred chhhhhHHhHHHHhHHHHHhhcchhhhhhcC
Q psy14104 289 TSRQWIATFIVFTGLFLDSFYSSKESAKRRQ 319 (319)
Q Consensus 289 s~~~~iG~~li~~Gv~~~~~~~~~~~~~~~~ 319 (319)
.+.-.++++++.++..++..+++.+++++||
T Consensus 22 GWwll~~lll~~~~~~~~~~~r~~~~~~yrr 52 (146)
T PF14316_consen 22 GWWLLLALLLLLLILLLWRLWRRWRRNRYRR 52 (146)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHccHHHH
Confidence 3444444444444545544445555544443
No 145
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=27.65 E-value=3.3e+02 Score=26.46 Aligned_cols=24 Identities=8% Similarity=0.207 Sum_probs=19.2
Q ss_pred CchhhhhHHhHHHHhHHHHHhhcc
Q psy14104 288 MTSRQWIATFIVFTGLFLDSFYSS 311 (319)
Q Consensus 288 ~s~~~~iG~~li~~Gv~~~~~~~~ 311 (319)
++..||+++.++++|+++..+.+|
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 789999999999999877654333
No 146
>KOG1442|consensus
Probab=26.25 E-value=22 Score=31.77 Aligned_cols=54 Identities=17% Similarity=0.142 Sum_probs=43.6
Q ss_pred HHHHHHHHhCchHHHHHHhHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHH
Q psy14104 252 FIFLTVTEYGPLPCSIVTTTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFL 305 (319)
Q Consensus 252 ~~~~~l~~~~a~~~si~~~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~ 305 (319)
+-..+++.+|-.-.-+--.+..++++++++++++++=+.....++.+++.|..+
T Consensus 118 fnnlcL~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l 171 (347)
T KOG1442|consen 118 FNNLCLKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL 171 (347)
T ss_pred ccceehhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee
Confidence 345678888877777777788899999999999999888888888888888544
No 147
>PF14880 COX14: Cytochrome oxidase c assembly
Probab=24.96 E-value=32 Score=22.86 Aligned_cols=25 Identities=24% Similarity=0.149 Sum_probs=16.9
Q ss_pred CCCchhhhhHHhHHHHhHHHHHhhc
Q psy14104 286 NVMTSRQWIATFIVFTGLFLDSFYS 310 (319)
Q Consensus 286 e~~s~~~~iG~~li~~Gv~~~~~~~ 310 (319)
+..+....+|..++.+|...|+.++
T Consensus 14 HR~tV~~Lig~T~~~g~~~~~~~y~ 38 (59)
T PF14880_consen 14 HRTTVLGLIGFTVYGGGLTVYTVYS 38 (59)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3456667778888777777766553
No 148
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=24.95 E-value=1.5e+02 Score=23.69 Aligned_cols=26 Identities=8% Similarity=-0.259 Sum_probs=17.3
Q ss_pred hhhHHHHHHHHHHHHhhhHHHHHHHH
Q psy14104 165 FGFGEFLLILSLLMDGLTGAVQERMK 190 (319)
Q Consensus 165 ~~~G~~l~~~s~~~~a~~~~~~~~~~ 190 (319)
...+.+..+++++.|.-|-...||..
T Consensus 119 ~i~~l~~~li~a~IwipYf~~S~RVK 144 (149)
T PF10754_consen 119 AIRELLRSLIAAAIWIPYFLRSKRVK 144 (149)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhh
Confidence 45566667777777777766666654
No 149
>KOG4831|consensus
Probab=24.73 E-value=79 Score=23.85 Aligned_cols=58 Identities=17% Similarity=0.148 Sum_probs=42.3
Q ss_pred HHHHHHHHHHHHhCchHHHHHH-hHHHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHH
Q psy14104 248 LGQFFIFLTVTEYGPLPCSIVT-TTRKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFL 305 (319)
Q Consensus 248 v~~~~~~~~l~~~~a~~~si~~-~~~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~ 305 (319)
.+...++..+.+.+-+.+..+. .+.-.++...|..+-.|...-...+|..++..|+.+
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~L 122 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWL 122 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhh
Confidence 3445667778888776655544 456677888887765566777899999999999865
No 150
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=24.33 E-value=1.6e+02 Score=22.91 Aligned_cols=54 Identities=15% Similarity=-0.006 Sum_probs=38.4
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHhhhhhcccccCCCCccccchhHHHHHHHHHHHHHHHH
Q psy14104 5 LSSKRLKFLFYAGGIFTFYFLFGILQEKITRGTYGESNEKFTCMLALVFVQCVINYIYAKI 65 (319)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~~~f~~p~~l~~~~~~~~~l~~~~ 65 (319)
...|+++++++......+.....++.++++... -++|.++.-+.......+.+.
T Consensus 51 ~~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m-------~NY~fFL~QlTt~gyvpIffa 104 (130)
T PF08627_consen 51 YSKENFKLLVYVVVYVVSGVINRVLYKKMTNPM-------KNYPFFLNQLTTFGYVPIFFA 104 (130)
T ss_pred hhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhc-------ccchHHHHHhcccceehHHHH
Confidence 457889999999999999999999999997332 234677765544443333333
No 151
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=24.32 E-value=75 Score=22.91 Aligned_cols=22 Identities=14% Similarity=0.200 Sum_probs=19.0
Q ss_pred CCchhhhhHHhHHHHhHHHHHh
Q psy14104 287 VMTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 287 ~~s~~~~iG~~li~~Gv~~~~~ 308 (319)
..++...+|++++++|..+|..
T Consensus 4 ~~~~~~iLgi~l~~~~~~Ly~l 25 (84)
T PF07444_consen 4 GFGPSYILGIILILGGLALYFL 25 (84)
T ss_pred ccCHHHHHHHHHHHHHHHHHHH
Confidence 4678899999999999999874
No 152
>PF15102 TMEM154: TMEM154 protein family
Probab=23.95 E-value=34 Score=27.39 Aligned_cols=19 Identities=11% Similarity=0.333 Sum_probs=10.3
Q ss_pred hhHHhHHHHhHHHHHhhcc
Q psy14104 293 WIATFIVFTGLFLDSFYSS 311 (319)
Q Consensus 293 ~iG~~li~~Gv~~~~~~~~ 311 (319)
+++++|++..+++..++++
T Consensus 66 VLLvlLLl~vV~lv~~~kR 84 (146)
T PF15102_consen 66 VLLVLLLLSVVCLVIYYKR 84 (146)
T ss_pred HHHHHHHHHHHHheeEEee
Confidence 4445555666666664433
No 153
>PHA03265 envelope glycoprotein D; Provisional
Probab=23.24 E-value=49 Score=30.47 Aligned_cols=22 Identities=23% Similarity=0.312 Sum_probs=16.7
Q ss_pred hHHHHhHHHHHhhcchhhhhhc
Q psy14104 297 FIVFTGLFLDSFYSSKESAKRR 318 (319)
Q Consensus 297 ~li~~Gv~~~~~~~~~~~~~~~ 318 (319)
.|+.+|+++|..|++||..++|
T Consensus 360 glv~vg~il~~~~rr~k~~~k~ 381 (402)
T PHA03265 360 GLVLVGVILYVCLRRKKELKKS 381 (402)
T ss_pred hhhhhhHHHHHHhhhhhhhhhh
Confidence 3578899999888877766655
No 154
>PF05568 ASFV_J13L: African swine fever virus J13L protein; InterPro: IPR008385 This family consists of several African swine fever virus (ASFV) j13L proteins [, , ].
Probab=22.48 E-value=76 Score=25.28 Aligned_cols=22 Identities=14% Similarity=0.203 Sum_probs=8.7
Q ss_pred HHhHHHHhHHHHHhhcchhhhh
Q psy14104 295 ATFIVFTGLFLDSFYSSKESAK 316 (319)
Q Consensus 295 G~~li~~Gv~~~~~~~~~~~~~ 316 (319)
|+++.+..+++..++..+||||
T Consensus 37 aIvVliiiiivli~lcssRKkK 58 (189)
T PF05568_consen 37 AIVVLIIIIIVLIYLCSSRKKK 58 (189)
T ss_pred HHHHHHHHHHHHHHHHhhhhHH
Confidence 3334344444433344333333
No 155
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=22.21 E-value=83 Score=17.78 Aligned_cols=15 Identities=0% Similarity=-0.186 Sum_probs=8.3
Q ss_pred CCchhhhhHHhHHHH
Q psy14104 287 VMTSRQWIATFIVFT 301 (319)
Q Consensus 287 ~~s~~~~iG~~li~~ 301 (319)
.-+...++|++++..
T Consensus 9 ~~~~~~~~G~~l~~~ 23 (34)
T TIGR01167 9 GNSLLLLLGLLLLGL 23 (34)
T ss_pred ccHHHHHHHHHHHHH
Confidence 345566777744443
No 156
>PF08114 PMP1_2: ATPase proteolipid family; InterPro: IPR012589 This family consists of small proteolipids associated with the plasma membrane H+ ATPase. Two proteolipids (PMP1 and PMP2) are associated with the ATPase and both genes are similarly expressed in the wild-type strain of yeast. No modification of the level of transcription of one PMP gene is detected in a strain deleted of the other. Though both proteolipids show similarity with other small proteolipids associated with other cation -transporting ATPases, their functions remain unclear [].
Probab=21.52 E-value=86 Score=19.16 Aligned_cols=19 Identities=21% Similarity=0.433 Sum_probs=10.7
Q ss_pred HHhHHHHHhhcchhhhhhc
Q psy14104 300 FTGLFLDSFYSSKESAKRR 318 (319)
Q Consensus 300 ~~Gv~~~~~~~~~~~~~~~ 318 (319)
+.+.++|..|..+|+..+|
T Consensus 24 iva~~iYRKw~aRkr~l~r 42 (43)
T PF08114_consen 24 IVALFIYRKWQARKRALQR 42 (43)
T ss_pred HHHHHHHHHHHHHHHHHhc
Confidence 4555666666555555444
No 157
>PF15108 TMEM37: Voltage-dependent calcium channel gamma-like subunit protein family
Probab=21.23 E-value=2.7e+02 Score=22.69 Aligned_cols=72 Identities=11% Similarity=0.140 Sum_probs=36.9
Q ss_pred HHHHHHHHhhhheeeecCCCCCCCCcchhhHHHHHHHHHHHHhhhHHHHHHHHhhc-CCChhhHHHHhHHHHH
Q psy14104 138 FFVLLVVIGVALFIYKDGKASKEESTNFGFGEFLLILSLLMDGLTGAVQERMKSES-QTKSGHMMVAMNKWSC 209 (319)
Q Consensus 138 ~~~~l~~~Gv~l~~~~~~~~~~~~~~~~~~G~~l~~~s~~~~a~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 209 (319)
++++.++.|.=+.+.++.-........+..|-.+.+.|-+.++-...-.-.+.+++ ....+.++||-...+.
T Consensus 93 lAVV~AIFGLElLmvSQvcEd~~SrrKWamGs~LlLvsfvlSs~GllsFviLL~~~vtl~GFTL~fWCeFtAs 165 (184)
T PF15108_consen 93 LAVVVAIFGLELLMVSQVCEDAHSRRKWAMGSVLLLVSFVLSSGGLLSFVILLRNQVTLIGFTLMFWCEFTAS 165 (184)
T ss_pred HHHHHHHHhHHHHHHHHHHhcchhhhhhhhhhHHHHHHHHHhcccHHHHHHHHhcchhhhhhHHHHHHHHHHH
Confidence 44555566655554432111111123467888888877776654433333334332 2345667777665544
No 158
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=20.43 E-value=34 Score=30.60 Aligned_cols=67 Identities=13% Similarity=0.206 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHhCchHHHHHHhH----HHHHHHHHHHHhcCCCCchhhhhHHhHHHHhHHHHHhhcch
Q psy14104 246 SALGQFFIFLTVTEYGPLPCSIVTTT----RKFFTVLGSIIFFGNVMTSRQWIATFIVFTGLFLDSFYSSK 312 (319)
Q Consensus 246 ~~v~~~~~~~~l~~~~a~~~si~~~~----~~v~~i~ls~~~~~e~~s~~~~iG~~li~~Gv~~~~~~~~~ 312 (319)
-+++-.+|.+.+++.+|+.-.+.... -.++-+++++++-....|...=+=-.+.+.++.+..|+...
T Consensus 118 LaL~vW~Ym~lLr~~GAs~WtiLaFcLAF~LaivlLIIAv~L~qaWfT~L~dL~WL~LFlaiLIWlY~H~~ 188 (381)
T PF05297_consen 118 LALGVWFYMWLLRELGASFWTILAFCLAFLLAIVLLIIAVLLHQAWFTILVDLYWLLLFLAILIWLYVHDQ 188 (381)
T ss_dssp -----------------------------------------------------------------------
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 34555566678999999876665532 23333444544444455544333335667777666655443
No 159
>TIGR00544 lgt prolipoprotein diacylglyceryl transferase. The conversion of lipoprotein precursors into lipoproteins consists of three steps. First, the enzyme described by this model transfers a diacylglyceryl moiety from phosphatidylglycerol to the side chain of a Cys that will become the new N-terminus. Second, the signal peptide is removed by signal peptidase II. Finally, the free amino group of the new N-terminal Cys is acylated by apolipoprotein N-acyltransferase.
Probab=20.14 E-value=75 Score=28.46 Aligned_cols=21 Identities=10% Similarity=0.153 Sum_probs=18.1
Q ss_pred CchhhhhHHhHHHHhHHHHHh
Q psy14104 288 MTSRQWIATFIVFTGLFLDSF 308 (319)
Q Consensus 288 ~s~~~~iG~~li~~Gv~~~~~ 308 (319)
+|..|+++..+++.|+.+..+
T Consensus 246 lt~~Q~~sl~~i~~g~~~~~~ 266 (278)
T TIGR00544 246 ISMGQILSLLMIAGILIIMLL 266 (278)
T ss_pred CcHHHHHHHHHHHHHHHHHHH
Confidence 699999999999999877653
No 160
>PF10883 DUF2681: Protein of unknown function (DUF2681); InterPro: IPR020274 This entry contains membrane proteins with no known function.
Probab=20.08 E-value=92 Score=22.61 Aligned_cols=24 Identities=13% Similarity=0.015 Sum_probs=14.8
Q ss_pred hhHHhHHHHhHHHHHhhcchhhhh
Q psy14104 293 WIATFIVFTGLFLDSFYSSKESAK 316 (319)
Q Consensus 293 ~iG~~li~~Gv~~~~~~~~~~~~~ 316 (319)
+.|++-++++++.|.+|+-+|.++
T Consensus 7 v~~~~~v~~~i~~y~~~k~~ka~~ 30 (87)
T PF10883_consen 7 VGGVGAVVALILAYLWWKVKKAKK 30 (87)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555677777787776555444
No 161
>PF03729 DUF308: Short repeat of unknown function (DUF308); InterPro: IPR005325 This represents a group of short repeats that occurs in a limited number of membrane proteins. It may divide further in short repeats of around 7-10 residues of the pattern G-#-X(2)-#(2)-X (#=hydrophobic).
Probab=20.05 E-value=1e+02 Score=20.44 Aligned_cols=15 Identities=13% Similarity=0.561 Sum_probs=8.7
Q ss_pred hhhhHHhHHHHhHHH
Q psy14104 291 RQWIATFIVFTGLFL 305 (319)
Q Consensus 291 ~~~iG~~li~~Gv~~ 305 (319)
...+|..+++.|+.-
T Consensus 25 ~~i~g~~~i~~Gi~~ 39 (72)
T PF03729_consen 25 AIILGIWLIISGIFQ 39 (72)
T ss_pred HHHHHHHHHHHHHHH
Confidence 455666666666643
Done!