BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14105
(198 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RIG|A Chain A, Sirt5 Is An Nad-Dependent Protein Lysine Demalonylase And
Desuccinylase
pdb|3RIG|B Chain B, Sirt5 Is An Nad-Dependent Protein Lysine Demalonylase And
Desuccinylase
pdb|3RIY|A Chain A, Sirt5 Is An Nad-Dependent Protein Lysine Demalonylase And
Desuccinylase
pdb|3RIY|B Chain B, Sirt5 Is An Nad-Dependent Protein Lysine Demalonylase And
Desuccinylase
pdb|4F4U|A Chain A, The Bicyclic Intermediate Structure Provides Insights Into
The Desuccinylation Mechanism Of Sirt5
pdb|4F4U|B Chain B, The Bicyclic Intermediate Structure Provides Insights Into
The Desuccinylation Mechanism Of Sirt5
pdb|4F56|A Chain A, The Bicyclic Intermediate Structure Provides Insights Into
The Desuccinylation Mechanism Of Sirt5
pdb|4F56|B Chain B, The Bicyclic Intermediate Structure Provides Insights Into
The Desuccinylation Mechanism Of Sirt5
Length = 273
Score = 180 bits (456), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 4/178 (2%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G+SAESG+PTFRG GG+WR +A +F NP RVW FY+YRR+ SK PN H
Sbjct: 31 GVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHR 90
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A+A E +Q + V+ TQN+D H+ AG++N++E+HGSL++T+C+ C V EN K P
Sbjct: 91 AIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSP 150
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVK 196
I P L A + D I V LPRC + CGGLLRP +VWFGE L+P ++
Sbjct: 151 ICPALS----GKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILE 204
>pdb|2NYR|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5 In Complex
With Suramin
pdb|2NYR|B Chain B, Crystal Structure Of Human Sirtuin Homolog 5 In Complex
With Suramin
Length = 271
Score = 180 bits (456), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 4/178 (2%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G+SAESG+PTFRG GG+WR +A +F NP RVW FY+YRR+ SK PN H
Sbjct: 29 GVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHR 88
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A+A E +Q + V+ TQN+D H+ AG++N++E+HGSL++T+C+ C V EN K P
Sbjct: 89 AIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSP 148
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVK 196
I P L A + D I V LPRC + CGGLLRP +VWFGE L+P ++
Sbjct: 149 ICPALS----GKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILE 202
>pdb|4G1C|A Chain A, Human Sirt5 Bound To Succ-Idh2 And Carba-Nad
pdb|4G1C|B Chain B, Human Sirt5 Bound To Succ-Idh2 And Carba-Nad
Length = 267
Score = 180 bits (456), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 4/178 (2%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G+SAESG+PTFRG GG+WR +A +F NP RVW FY+YRR+ SK PN H
Sbjct: 25 GVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHR 84
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A+A E +Q + V+ TQN+D H+ AG++N++E+HGSL++T+C+ C V EN K P
Sbjct: 85 AIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSP 144
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVK 196
I P L A + D I V LPRC + CGGLLRP +VWFGE L+P ++
Sbjct: 145 ICPALS----GKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILE 198
>pdb|2B4Y|A Chain A, Crystal Structure Of Human Sirtuin Homolog 5
pdb|2B4Y|B Chain B, Crystal Structure Of Human Sirtuin Homolog 5
pdb|2B4Y|C Chain C, Crystal Structure Of Human Sirtuin Homolog 5
pdb|2B4Y|D Chain D, Crystal Structure Of Human Sirtuin Homolog 5
Length = 271
Score = 180 bits (456), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 4/178 (2%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G+SAESG+PTFRG GG+WR +A +F NP RVW FY+YRR+ SK PN H
Sbjct: 29 GVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVXGSKEPNAGHR 88
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A+A E +Q + V+ TQN+D H+ AG++N++E+HGSL++T+C+ C V EN K P
Sbjct: 89 AIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSP 148
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVK 196
I P L A + D I V LPRC + CGGLLRP +VWFGE L+P ++
Sbjct: 149 ICPALS----GKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILE 202
>pdb|4HDA|A Chain A, Crystal Structure Of Human Sirt5 In Complex With
Fluor-de-lys Peptide And Resveratrol
pdb|4HDA|B Chain B, Crystal Structure Of Human Sirt5 In Complex With
Fluor-de-lys Peptide And Resveratrol
Length = 275
Score = 180 bits (456), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 111/178 (62%), Gaps = 4/178 (2%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G+SAESG+PTFRG GG+WR +A +F NP RVW FY+YRR+ SK PN H
Sbjct: 33 GVSAESGVPTFRGAGGYWRKWQAQDLATPLAFAHNPSRVWEFYHYRREVMGSKEPNAGHR 92
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A+A E +Q + V+ TQN+D H+ AG++N++E+HGSL++T+C+ C V EN K P
Sbjct: 93 AIAECETRLGKQGRRVVVITQNIDELHRKAGTKNLLEIHGSLFKTRCTSCGVVAENYKSP 152
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVK 196
I P L A + D I V LPRC + CGGLLRP +VWFGE L+P ++
Sbjct: 153 ICPALS----GKGAPEPGTQDASIPVEKLPRCEEAGCGGLLRPHVVWFGENLDPAILE 206
>pdb|1M2G|A Chain A, Sir2 Homologue-Adp Ribose Complex
Length = 249
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 95/180 (52%), Gaps = 30/180 (16%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G+SAESGIPTFRG G W +AN ++F ++P +VW +Y +R ++ + PNKAH
Sbjct: 22 GVSAESGIPTFRGKDGLWNRYRPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQ 81
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A A E + + L TQNVD H+ AGSRNVI LHGSL +C+ C+ E P
Sbjct: 82 AFAELERLGVLK----CLITQNVDDLHERAGSRNVIHLHGSLRVVRCTSCNNSFEVESAP 137
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVKMA 198
+P LP+C DK CG LLRP +VWFGE L P + A
Sbjct: 138 KIP------------------------PLPKC-DK-CGSLLRPGVVWFGEMLPPDVLDRA 171
>pdb|1ICI|A Chain A, Crystal Structure Of A Sir2 Homolog-Nad Complex
pdb|1ICI|B Chain B, Crystal Structure Of A Sir2 Homolog-Nad Complex
Length = 256
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 95/180 (52%), Gaps = 30/180 (16%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G+SAESGIPTFRG G W +AN ++F ++P +VW +Y +R ++ + PNKAH
Sbjct: 33 GVSAESGIPTFRGKDGLWNRYRPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQ 92
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A A E + + L TQNVD H+ AGSRNVI LHGSL +C+ C+ E P
Sbjct: 93 AFAELERLGVLK----CLITQNVDDLHERAGSRNVIHLHGSLRVVRCTSCNNSFEVESAP 148
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVKMA 198
+P LP+C DK CG LLRP +VWFGE L P + A
Sbjct: 149 KIP------------------------PLPKC-DK-CGSLLRPGVVWFGEMLPPDVLDRA 182
>pdb|1M2N|A Chain A, Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acetyl Adp
Ribose Complex
pdb|1M2N|B Chain B, Sir2 Homologues (D102gF159AR170A) MUTANT-2'-O-Acetyl Adp
Ribose Complex
Length = 249
Score = 128 bits (322), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/180 (40%), Positives = 95/180 (52%), Gaps = 30/180 (16%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G+SAESGIPTFRG G W +AN ++F ++P +VW +Y +R ++ + PNKAH
Sbjct: 22 GVSAESGIPTFRGKDGLWNRYRPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQ 81
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A A E + + L TQNVDG H+ AGSRNVI LHGSL +C+ C+ E P
Sbjct: 82 AFAELERLGVLK----CLITQNVDGLHERAGSRNVIHLHGSLRVVRCTSCNNSFEVESAP 137
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVKMA 198
+P LP+C DK CG LLRP +VW GE L P + A
Sbjct: 138 KIP------------------------PLPKC-DK-CGSLLRPGVVWAGEMLPPDVLDAA 171
>pdb|1M2H|A Chain A, Sir2 Homologue S24a Mutant-adp Ribose Complex
Length = 249
Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 95/180 (52%), Gaps = 30/180 (16%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G++AESGIPTFRG G W +AN ++F ++P +VW +Y +R ++ + PNKAH
Sbjct: 22 GVAAESGIPTFRGKDGLWNRYRPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQ 81
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A A E + + L TQNVD H+ AGSRNVI LHGSL +C+ C+ E P
Sbjct: 82 AFAELERLGVLK----CLITQNVDDLHERAGSRNVIHLHGSLRVVRCTSCNNSFEVESAP 137
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVKMA 198
+P LP+C DK CG LLRP +VWFGE L P + A
Sbjct: 138 KIP------------------------PLPKC-DK-CGSLLRPGVVWFGEMLPPDVLDRA 171
>pdb|1M2J|A Chain A, Sir2 Homologue H80n Mutant-Adp Ribose Complex
Length = 249
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 95/180 (52%), Gaps = 30/180 (16%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G+SAESGIPTFRG G W +AN ++F ++P +VW +Y +R ++ + PNKA+
Sbjct: 22 GVSAESGIPTFRGKDGLWNRYRPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKANQ 81
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A A E + + L TQNVD H+ AGSRNVI LHGSL +C+ C+ E P
Sbjct: 82 AFAELERLGVLK----CLITQNVDDLHERAGSRNVIHLHGSLRVVRCTSCNNSFEVESAP 137
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVKMA 198
+P LP+C DK CG LLRP +VWFGE L P + A
Sbjct: 138 KIP------------------------PLPKC-DK-CGSLLRPGVVWFGEMLPPDVLDRA 171
>pdb|1M2K|A Chain A, Sir2 Homologue F159a Mutant-Adp Ribose Complex
Length = 249
Score = 125 bits (314), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/180 (40%), Positives = 94/180 (52%), Gaps = 30/180 (16%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
G+SAESGIPTFRG G W +AN ++F ++P +VW +Y +R ++ + PNKAH
Sbjct: 22 GVSAESGIPTFRGKDGLWNRYRPEELANPQAFAKDPEKVWKWYAWRMEKVFNAQPNKAHQ 81
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A A E + + L TQNVD H+ AGSRNVI LHGSL +C+ C+ E P
Sbjct: 82 AFAELERLGVLK----CLITQNVDDLHERAGSRNVIHLHGSLRVVRCTSCNNSFEVESAP 137
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQYVKMA 198
+P LP+C DK CG LLRP +VW GE L P + A
Sbjct: 138 KIP------------------------PLPKC-DK-CGSLLRPGVVWAGEMLPPDVLDRA 171
>pdb|1MA3|A Chain A, Structure Of A Sir2 Enzyme Bound To An Acetylated P53
Peptide
pdb|1S7G|A Chain A, Structural Basis For The Mechanism And Regulation Of Sir2
Enzymes
pdb|1S7G|B Chain B, Structural Basis For The Mechanism And Regulation Of Sir2
Enzymes
pdb|1S7G|C Chain C, Structural Basis For The Mechanism And Regulation Of Sir2
Enzymes
pdb|1S7G|D Chain D, Structural Basis For The Mechanism And Regulation Of Sir2
Enzymes
pdb|1S7G|E Chain E, Structural Basis For The Mechanism And Regulation Of Sir2
Enzymes
pdb|1YC2|A Chain A, Sir2af2-Nad-Adpribose-Nicotinamide
pdb|1YC2|B Chain B, Sir2af2-Nad-Adpribose-Nicotinamide
pdb|1YC2|C Chain C, Sir2af2-Nad-Adpribose-Nicotinamide
pdb|1YC2|D Chain D, Sir2af2-Nad-Adpribose-Nicotinamide
pdb|1YC2|E Chain E, Sir2af2-Nad-Adpribose-Nicotinamide
Length = 253
Score = 106 bits (264), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 67/177 (37%), Positives = 89/177 (50%), Gaps = 32/177 (18%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
GISAESGIPTFRG+ G WR +A+I FK NP W F + + ++ PN AHY
Sbjct: 25 GISAESGIPTFRGEDGLWRKYDPEEVASISGFKRNPRAFWEFSMEMKDKLFAE-PNPAHY 83
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
A+A E R + TQN+D HQ AGSR V+ELHGS+ + C C + +
Sbjct: 84 AIAELE----RMGIVKAVITQNIDMLHQRAGSRRVLELHGSMDKLDCLDCHETYD----- 134
Query: 139 IVPVLDEAICNPNASDVWYS-DEEINVNDLPRCSDKACGG-LLRPDIVWFGEQLNPQ 193
W E+ N ++PRC + CG ++P +V FGE L PQ
Sbjct: 135 -----------------WSEFVEDFNKGEIPRC--RKCGSYYVKPRVVLFGEPL-PQ 171
>pdb|1S5P|A Chain A, Structure And Substrate Binding Properties Of Cobb, A Sir2
Homolog Protein Deacetylase From Eschericia Coli
Length = 235
Score = 101 bits (252), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/172 (37%), Positives = 82/172 (47%), Gaps = 31/172 (18%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASK--APNKA 76
GISAESGI TFR G W + V +A E F +P V AFYN RR+Q PN A
Sbjct: 11 GISAESGIRTFRAADGLWEEHRVEDVATPEGFDRDPELVQAFYNARRRQLQQPEIQPNAA 70
Query: 77 HYALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRK 136
H ALA+ ++ F+L TQN+D H+ AG+ NVI +HG L + +CS +V
Sbjct: 71 HLALAKLQDAL---GDRFLLVTQNIDNLHERAGNTNVIHMHGELLKVRCSQSGQV----- 122
Query: 137 IPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGE 188
LD W D V +C LRP +VWFGE
Sbjct: 123 ------LD-----------WTGD----VTPEDKCHCCQFPAPLRPHVVWFGE 153
>pdb|1YC5|A Chain A, Sir2-P53 Peptide-Nicotinamide
pdb|2H4F|A Chain A, Sir2-P53 Peptide-Nad+
pdb|2H4J|A Chain A, Sir2-Deacetylated Peptide (From Enzymatic Turnover In
Crystal)
pdb|2H2D|A Chain A, The Structural Basis For Sirtuin Substrate Affinity
pdb|2H2F|A Chain A, The Structural Basis For Sirtuin Substrate Affinity
pdb|2H2G|A Chain A, The Structural Basis Of Sirtuin Substrate Affinity
pdb|2H2H|A Chain A, The Structural Basis Of Sirtuin Substrate Specificity
pdb|2H2I|A Chain A, The Structural Basis Of Sirtuin Substrate Affinity
pdb|3D4B|A Chain A, Crystal Structure Of Sir2tm In Complex With Acetyl P53
Peptide And Dadme-Nad+
pdb|3D81|A Chain A, Sir2-S-Alkylamidate Complex Crystal Structure
pdb|3PDH|A Chain A, Structure Of Sir2tm Bound To A Propionylated Peptide
Length = 246
Score = 92.0 bits (227), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 59/175 (33%), Positives = 86/175 (49%), Gaps = 29/175 (16%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
GIS SGIP FRG G ++ + ++ +I+ F +P + F PN AH
Sbjct: 23 GISTPSGIPDFRGPNGIYKK-YSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHV 81
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
LA+ EE+ + + + TQN+D HQ AGS+ VIELHG++ C C+K
Sbjct: 82 LLAKLEEKGLIE----AVITQNIDRLHQRAGSKKVIELHGNVEEYYCVRCEK-------- 129
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQ 193
DV +++ +D+P C D C L+RP+IV+FGE L PQ
Sbjct: 130 ----------KYTVEDVI---KKLESSDVPLCDD--CNSLIRPNIVFFGENL-PQ 168
>pdb|2H4H|A Chain A, Sir2 H116y Mutant-P53 Peptide-Nad
Length = 246
Score = 89.7 bits (221), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 86/175 (49%), Gaps = 29/175 (16%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
GIS SGIP FRG G ++ + ++ +I+ F +P + F PN AH
Sbjct: 23 GISTPSGIPDFRGPNGIYKK-YSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHV 81
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
LA+ EE+ + + + TQN+D HQ AGS+ VIEL+G++ C C+K
Sbjct: 82 LLAKLEEKGLIE----AVITQNIDRLHQRAGSKKVIELYGNVEEYYCVRCEK-------- 129
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQ 193
DV +++ +D+P C D C L+RP+IV+FGE L PQ
Sbjct: 130 ----------KYTVEDVI---KKLESSDVPLCDD--CNSLIRPNIVFFGENL-PQ 168
>pdb|2H59|A Chain A, Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp Ribose
pdb|2H59|B Chain B, Sir2 H116a-Deacetylated P53 Peptide-3'-O-Acetyl Adp Ribose
pdb|3JR3|A Chain A, Sir2 Bound To Acetylated Peptide
Length = 246
Score = 88.2 bits (217), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/175 (33%), Positives = 85/175 (48%), Gaps = 29/175 (16%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
GIS SGIP FRG G ++ + ++ +I+ F +P + F PN AH
Sbjct: 23 GISTPSGIPDFRGPNGIYKK-YSQNVFDIDFFYSHPEEFYRFAKEGIFPMLQAKPNLAHV 81
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCDKVEENRKIP 138
LA+ EE+ + + + TQN+D HQ AGS+ VIEL G++ C C+K
Sbjct: 82 LLAKLEEKGLIE----AVITQNIDRLHQRAGSKKVIELAGNVEEYYCVRCEK-------- 129
Query: 139 IVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGEQLNPQ 193
DV +++ +D+P C D C L+RP+IV+FGE L PQ
Sbjct: 130 ----------KYTVEDVI---KKLESSDVPLCDD--CNSLIRPNIVFFGENL-PQ 168
>pdb|3U31|A Chain A, Plasmodium Falciparum Sir2a Preferentially Hydrolyzes
Medium And Long Chain Fatty Acyl Lysine
pdb|3U3D|A Chain A, Plasmodium Falciparum Sir2a Preferentially Hydrolyzes
Medium And Long Chain Fatty Acyl Lysine
Length = 290
Score = 70.1 bits (170), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 84/193 (43%), Gaps = 26/193 (13%)
Query: 7 KWYKNVSQEIAIGISAESGIPTFRGDG-GWWRNNHVAHIANIESFKENPGRVWAFYNYRR 65
K K+V G SAES IP+FRG W I F + P ++W
Sbjct: 43 KKCKHVVALTGSGTSAESNIPSFRGSSNSIWSKYDPRIYGTIWGFWKYPEKIWEVIRDIS 102
Query: 66 QQAASKAPNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKC 125
+ N H AL+ E + KS V TQNVDG H+A+G+ VI LHG+++ C
Sbjct: 103 SDYEIEI-NNGHVALSTLES--LGYLKSVV--TQNVDGLHEASGNTKVISLHGNVFEAVC 157
Query: 126 SWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVW 185
C+K+ + KI + S + P C CGG+ +P+I+
Sbjct: 158 CTCNKIVKLNKIML----------QKTSHFMHQLP-------PEC---PCGGIFKPNIIL 197
Query: 186 FGEQLNPQYVKMA 198
FGE ++ +K A
Sbjct: 198 FGEVVSSDLLKEA 210
>pdb|3JWP|A Chain A, Crystal Structure Of Plasmodium Falciparum Sir2a
(Pf13_0152) In Complex With Amp
Length = 265
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 83/193 (43%), Gaps = 26/193 (13%)
Query: 7 KWYKNVSQEIAIGISAESGIPTFRGDG-GWWRNNHVAHIANIESFKENPGRVWAFYNYRR 65
K K+V G SAES IP+FRG W I F + P ++W
Sbjct: 18 KKCKHVVALTGSGTSAESNIPSFRGSSNSIWSKYDPRIYGTIWGFWKYPEKIWEVIRDIS 77
Query: 66 QQAASKAPNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKC 125
+ N H AL+ E + KS V TQNVDG H+A+G+ VI LHG+++ C
Sbjct: 78 SDYEIEI-NNGHVALSTLES--LGYLKSVV--TQNVDGLHEASGNTKVISLHGNVFEAVC 132
Query: 126 SWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVW 185
C+K+ + KI + P P C CGG+ +P+I+
Sbjct: 133 CTCNKIVKLNKIXLQKTSHFXHQLP-----------------PEC---PCGGIFKPNIIL 172
Query: 186 FGEQLNPQYVKMA 198
FGE ++ +K A
Sbjct: 173 FGEVVSSDLLKEA 185
>pdb|4FVT|A Chain A, Human Sirt3 Bound To Ac-Acs Peptide And Carba-Nad
Length = 274
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 40/196 (20%)
Query: 10 KNVSQEIAIGISAESGIPTFRGDG-GWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQA 68
+ V + GIS SGIP FR G G + N + E+ E P + F+N +
Sbjct: 17 QRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELP---FFFHNPKPFFT 73
Query: 69 ASK-------APNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAG--SRNVIELHGS 119
+K PN HY L ++ + L+TQN+DG + +G + ++E HG+
Sbjct: 74 LAKELYPGNYKPNVTHYFLRLLHDKGLLLR----LYTQNIDGLERVSGIPASKLVEAHGT 129
Query: 120 LWRTKCSWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLL 179
C+ C + P E I ++ + +PRC C G++
Sbjct: 130 FASATCTVCQR----------PFPGEDI-----------RADVMADRVPRC--PVCTGVV 166
Query: 180 RPDIVWFGEQLNPQYV 195
+PDIV+FGE L +++
Sbjct: 167 KPDIVFFGEPLPQRFL 182
>pdb|3GLR|A Chain A, Crystal Structure Of Human Sirt3 With Acetyl-Lysine Acecs2
Peptide
pdb|3GLS|A Chain A, Crystal Structure Of Human Sirt3
pdb|3GLS|B Chain B, Crystal Structure Of Human Sirt3
pdb|3GLS|C Chain C, Crystal Structure Of Human Sirt3
pdb|3GLS|D Chain D, Crystal Structure Of Human Sirt3
pdb|3GLS|E Chain E, Crystal Structure Of Human Sirt3
pdb|3GLS|F Chain F, Crystal Structure Of Human Sirt3
pdb|3GLT|A Chain A, Crystal Structure Of Human Sirt3 With Adpr Bound To The
Acecs2 Peptide Containing A Thioacetyl Lysine
pdb|3GLU|A Chain A, Crystal Structure Of Human Sirt3 With Acecs2 Peptide
Length = 285
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 40/196 (20%)
Query: 10 KNVSQEIAIGISAESGIPTFRGDG-GWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQA 68
+ V + GIS SGIP FR G G + N + E+ E P + F+N +
Sbjct: 24 QRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELP---FFFHNPKPFFT 80
Query: 69 ASK-------APNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAG--SRNVIELHGS 119
+K PN HY L ++ + L+TQN+DG + +G + ++E HG+
Sbjct: 81 LAKELYPGNYKPNVTHYFLRLLHDKGLLLR----LYTQNIDGLERVSGIPASKLVEAHGT 136
Query: 120 LWRTKCSWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLL 179
C+ C + P E I ++ + +PRC C G++
Sbjct: 137 FASATCTVCQR----------PFPGEDI-----------RADVMADRVPRCP--VCTGVV 173
Query: 180 RPDIVWFGEQLNPQYV 195
+PDIV+FGE L +++
Sbjct: 174 KPDIVFFGEPLPQRFL 189
>pdb|4HD8|A Chain A, Crystal Structure Of Human Sirt3 In Complex With
Fluor-de-lys Peptide And Piceatannol
Length = 284
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 85/196 (43%), Gaps = 40/196 (20%)
Query: 10 KNVSQEIAIGISAESGIPTFRGDG-GWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQA 68
+ V + GIS SGIP FR G G + N + E+ E P + F+N +
Sbjct: 23 QRVVVMVGAGISTPSGIPDFRSPGSGLYSNLQQYDLPYPEAIFELP---FFFHNPKPFFT 79
Query: 69 ASK-------APNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAG--SRNVIELHGS 119
+K PN HY L ++ + L+TQN+DG + +G + ++E HG+
Sbjct: 80 LAKELYPGNYKPNVTHYFLRLLHDKGLLLR----LYTQNIDGLERVSGIPASKLVEAHGT 135
Query: 120 LWRTKCSWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLL 179
C+ C + P E I ++ + +PRC C G++
Sbjct: 136 FASATCTVCQR----------PFPGEDI-----------RADVMADRVPRCP--VCTGVV 172
Query: 180 RPDIVWFGEQLNPQYV 195
+PDIV+FGE L +++
Sbjct: 173 KPDIVFFGEPLPQRFL 188
>pdb|1SZC|A Chain A, Structural Basis For Nicotinamide Cleavage And Adp-Ribose
Transfer By Nad+-Dependent Sir2 HistonePROTEIN
DEACETYLASES
pdb|1SZD|A Chain A, Structural Basis For Nicotinamide Cleavage And Adp-Ribose
Transfer By Nad+-Dependent Sir2 HistonePROTEIN
DEACETYLASES
Length = 297
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 37/185 (20%)
Query: 16 IAIGISAESGIPTFRGDG-GWWRN------NHVAHIANIESFKENPGRVWAFYNYRRQQ- 67
+ GIS GIP FR G G + N + + +++ F+ +P FY ++
Sbjct: 34 VGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDP---LPFYTLAKELY 90
Query: 68 AASKAPNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRN--VIELHGSLWRTKC 125
+ P+K HY L F+++ + + ++TQN+D + AG ++ +IE HGS C
Sbjct: 91 PGNFRPSKFHYLLKLFQDKDVLKR----VYTQNIDTLERQAGVKDDLIIEAHGSFAHCHC 146
Query: 126 SWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVW 185
C KV + V + E + D +C CG L++P IV+
Sbjct: 147 IGCGKVYPPQ------VFKSKLA------------EHPIKDFVKCD--VCGELVKPAIVF 186
Query: 186 FGEQL 190
FGE L
Sbjct: 187 FGEDL 191
>pdb|1Q1A|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary
Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide
Length = 289
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 39/186 (20%)
Query: 16 IAIGISAESGIPTFRGDG-GWWRN------NHVAHIANIESFKENPGRVWAFYNYRRQQ- 67
+ GIS GIP FR G G + N + + +++ F+ +P FY ++
Sbjct: 27 VGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDP---LPFYTLAKELY 83
Query: 68 AASKAPNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRN--VIELHGSLWRTKC 125
+ P+K HY L F+++ + + ++TQN+D + AG ++ +IE HGS C
Sbjct: 84 PGNFRPSKFHYLLKLFQDKDVLKR----VYTQNIDTLERQAGVKDDLIIEAHGSFAHCHC 139
Query: 126 SWCDKVEENRKIPIVPVLDEAICNPNASDVWYSD-EEINVNDLPRCSDKACGGLLRPDIV 184
C KV V+ S E + D +C CG L++P IV
Sbjct: 140 IGCGKV-------------------YPPQVFKSKLAEHPIKDFVKCD--VCGELVKPAIV 178
Query: 185 WFGEQL 190
+FGE L
Sbjct: 179 FFGEDL 184
>pdb|1Q17|A Chain A, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary
Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide
pdb|1Q17|B Chain B, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary
Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide
pdb|1Q17|C Chain C, Structure Of The Yeast Hst2 Protein Deacetylase In Ternary
Complex With 2'-O-Acetyl Adp Ribose And Histone Peptide
Length = 300
Score = 63.5 bits (153), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 37/185 (20%)
Query: 16 IAIGISAESGIPTFRGDG-GWWRN------NHVAHIANIESFKENPGRVWAFYNYRRQQ- 67
+ GIS GIP FR G G + N + + +++ F+ +P FY ++
Sbjct: 37 VGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDP---LPFYTLAKELY 93
Query: 68 AASKAPNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRN--VIELHGSLWRTKC 125
+ P+K HY L F+++ + + ++TQN+D + AG ++ +IE HGS C
Sbjct: 94 PGNFRPSKFHYLLKLFQDKDVLKR----VYTQNIDTLERQAGVKDDLIIEAHGSFAHCHC 149
Query: 126 SWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVW 185
C KV + V + E + D +C CG L++P IV+
Sbjct: 150 IGCGKVYPPQ------VFKSKLA------------EHPIKDFVKCD--VCGELVKPAIVF 189
Query: 186 FGEQL 190
FGE L
Sbjct: 190 FGEDL 194
>pdb|2OD7|A Chain A, Crystal Structure Of Yhst2 Bound To The Intermediate
Analogue Adp-Hpd, And And Aceylated H4 Peptide
pdb|2OD9|A Chain A, Structural Basis For Nicotinamide Inhibition And Base
Exchange In Sir2 Enzymes
pdb|2QQF|A Chain A, Hst2 Bound To Adp-Hpd And Acetylated Histone H4
pdb|2QQG|A Chain A, Hst2 Bound To Adp-hpd, Acetyllated Histone H4 And
Nicotinamide
Length = 308
Score = 63.5 bits (153), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 37/185 (20%)
Query: 16 IAIGISAESGIPTFRGDG-GWWRN------NHVAHIANIESFKENPGRVWAFYNYRRQQ- 67
+ GIS GIP FR G G + N + + +++ F+ +P FY ++
Sbjct: 45 VGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDP---LPFYTLAKELY 101
Query: 68 AASKAPNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRN--VIELHGSLWRTKC 125
+ P+K HY L F+++ + + ++TQN+D + AG ++ +IE HGS C
Sbjct: 102 PGNFRPSKFHYLLKLFQDKDVLKR----VYTQNIDTLERQAGVKDDLIIEAHGSFAHCHC 157
Query: 126 SWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVW 185
C KV + V + E + D +C CG L++P IV+
Sbjct: 158 IGCGKVYPPQ------VFKSKLA------------EHPIKDFVKCD--VCGELVKPAIVF 197
Query: 186 FGEQL 190
FGE L
Sbjct: 198 FGEDL 202
>pdb|1Q14|A Chain A, Structure And Autoregulation Of The Yeast Hst2 Homolog Of
Sir2
Length = 361
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 82/185 (44%), Gaps = 37/185 (20%)
Query: 16 IAIGISAESGIPTFRGDG-GWWRN------NHVAHIANIESFKENPGRVWAFYNYRRQQ- 67
+ GIS GIP FR G G + N + + +++ F+ +P FY ++
Sbjct: 35 VGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDP---LPFYTLAKELY 91
Query: 68 AASKAPNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRN--VIELHGSLWRTKC 125
+ P+K HY L F+++ + + ++TQN+D + AG ++ +IE HGS C
Sbjct: 92 PGNFRPSKFHYLLKLFQDKDVLKR----VYTQNIDTLERQAGVKDDLIIEAHGSFAHCHC 147
Query: 126 SWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVW 185
C KV + V + E + D +C CG L++P IV+
Sbjct: 148 IGCGKVYPPQ------VFKSKLA------------EHPIKDFVKCD--VCGELVKPAIVF 187
Query: 186 FGEQL 190
FGE L
Sbjct: 188 FGEDL 192
>pdb|2OD2|A Chain A, Crystal Structure Of Yhst2 I117f Mutant Bound To
Carba-Nad+ And An Acetylated H4 Peptide
Length = 308
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 37/185 (20%)
Query: 16 IAIGISAESGIPTFRGDG-GWWRN------NHVAHIANIESFKENPGRVWAFYNYRRQQ- 67
+ GIS GIP FR G G + N + + +++ F+ +P FY ++
Sbjct: 45 VGAGISTSCGIPDFRSPGTGLYHNLARLKLPYPEAVFDVDFFQSDP---LPFYTLAKELY 101
Query: 68 AASKAPNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRN--VIELHGSLWRTKC 125
+ P+K HY L F+++ + + ++TQN D + AG ++ +IE HGS C
Sbjct: 102 PGNFRPSKFHYLLKLFQDKDVLKR----VYTQNFDTLERQAGVKDDLIIEAHGSFAHCHC 157
Query: 126 SWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVW 185
C KV + V + E + D +C CG L++P IV+
Sbjct: 158 IGCGKVYPPQ------VFKSKLA------------EHPIKDFVKCD--VCGELVKPAIVF 197
Query: 186 FGEQL 190
FGE L
Sbjct: 198 FGEDL 202
>pdb|4I5I|A Chain A, Crystal Structure Of The Sirt1 Catalytic Domain Bound To
Nad And An Ex527 Analog
pdb|4I5I|B Chain B, Crystal Structure Of The Sirt1 Catalytic Domain Bound To
Nad And An Ex527 Analog
Length = 287
Score = 60.1 bits (144), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 36/186 (19%)
Query: 19 GISAESGIPTFRGDGGWWRNNHV--------AHIANIESFKENPGRVWAFYNYRRQQAAS 70
G+S GIP FR G + V + +IE F+++P F+ + ++
Sbjct: 26 GVSVSCGIPDFRSRDGIYARLAVDFPDLPDPQAMFDIEYFRKDP---RPFFKFAKEIYPG 82
Query: 71 K-APNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAGSRNVIELHGSLWRTKCSWCD 129
+ P+ H +A ++E K +TQN+D Q AG + +I+ HGS C C
Sbjct: 83 QFQPSLCHKFIALSDKE----GKLLRNYTQNIDTLEQVAGIQRIIQCHGSFATASCLICK 138
Query: 130 -KVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIVWFGE 188
KV+ C D++ V PRC +++P+IV+FGE
Sbjct: 139 YKVD---------------CEAVRGDIFNQ----VVPRCPRCPADEPLAIMKPEIVFFGE 179
Query: 189 QLNPQY 194
L Q+
Sbjct: 180 NLPEQF 185
>pdb|1J8F|A Chain A, Human Sirt2 Histone Deacetylase
Length = 323
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 40/190 (21%)
Query: 16 IAIGISAESGIPTFRG-DGGWWRNNHVAH------IANIESFKENPGRVWAFYNYRRQQA 68
+ GIS +GIP FR G + N H I I FK++P +A +
Sbjct: 50 VGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALA--KELYP 107
Query: 69 ASKAPNKAHYALARFEEECIRQNKSFVL--FTQNVDGYHQAAG--SRNVIELHGSLWRTK 124
P HY + + ++K +L +TQN+D + AG +++E HG+ + +
Sbjct: 108 GQFKPTICHYFMR------LLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSH 161
Query: 125 CSWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIV 184
C A C W E+I P+C D C L++PDIV
Sbjct: 162 CV------------------SASCRHEYPLSWMK-EKIFSEVTPKCED--CQSLVKPDIV 200
Query: 185 WFGEQLNPQY 194
+FGE L ++
Sbjct: 201 FFGESLPARF 210
>pdb|1J8F|C Chain C, Human Sirt2 Histone Deacetylase
pdb|1J8F|B Chain B, Human Sirt2 Histone Deacetylase
Length = 323
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 78/190 (41%), Gaps = 40/190 (21%)
Query: 16 IAIGISAESGIPTFRG-DGGWWRNNHVAH------IANIESFKENPGRVWAFYNYRRQQA 68
+ GIS +GIP FR G + N H I I FK++P +A +
Sbjct: 50 VGAGISTSAGIPDFRSPSTGLYDNLEKYHLPYPEAIFEISYFKKHPEPFFALA--KELYP 107
Query: 69 ASKAPNKAHYALARFEEECIRQNKSFVL--FTQNVDGYHQAAG--SRNVIELHGSLWRTK 124
P HY + + ++K +L +TQN+D + AG +++E HG+ + +
Sbjct: 108 GQFKPTICHYFMR------LLKDKGLLLRCYTQNIDTLERIAGLEQEDLVEAHGTFYTSH 161
Query: 125 CSWCDKVEENRKIPIVPVLDEAICNPNASDVWYSDEEINVNDLPRCSDKACGGLLRPDIV 184
C A C W E+I P+C D C L++PDIV
Sbjct: 162 CV------------------SASCRHEYPLSWMK-EKIFSEVTPKCED--CQSLVKPDIV 200
Query: 185 WFGEQLNPQY 194
+FGE L ++
Sbjct: 201 FFGESLPARF 210
>pdb|3PKI|A Chain A, Human Sirt6 Crystal Structure In Complex With Adp Ribose
pdb|3PKI|B Chain B, Human Sirt6 Crystal Structure In Complex With Adp Ribose
pdb|3PKI|C Chain C, Human Sirt6 Crystal Structure In Complex With Adp Ribose
pdb|3PKI|D Chain D, Human Sirt6 Crystal Structure In Complex With Adp Ribose
pdb|3PKI|E Chain E, Human Sirt6 Crystal Structure In Complex With Adp Ribose
pdb|3PKI|F Chain F, Human Sirt6 Crystal Structure In Complex With Adp Ribose
pdb|3PKJ|A Chain A, Human Sirt6 Crystal Structure In Complex With 2'-N-Acetyl
Adp Ribose
pdb|3PKJ|B Chain B, Human Sirt6 Crystal Structure In Complex With 2'-N-Acetyl
Adp Ribose
pdb|3PKJ|C Chain C, Human Sirt6 Crystal Structure In Complex With 2'-N-Acetyl
Adp Ribose
pdb|3PKJ|D Chain D, Human Sirt6 Crystal Structure In Complex With 2'-N-Acetyl
Adp Ribose
pdb|3PKJ|E Chain E, Human Sirt6 Crystal Structure In Complex With 2'-N-Acetyl
Adp Ribose
pdb|3PKJ|F Chain F, Human Sirt6 Crystal Structure In Complex With 2'-N-Acetyl
Adp Ribose
Length = 355
Score = 48.5 bits (114), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 23/112 (20%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
GIS SGIP FRG G W +E P F + R P + H
Sbjct: 54 GISTASGIPDFRGPHGVW---------TMEERGLAPKFDTTFESAR--------PTQTHM 96
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAG--SRNVIELHGSLWRTKCSWC 128
AL + E R L +QNVDG H +G + ELHG+++ +C+ C
Sbjct: 97 ALVQLE----RVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKC 144
>pdb|3K35|A Chain A, Crystal Structure Of Human Sirt6
pdb|3K35|B Chain B, Crystal Structure Of Human Sirt6
pdb|3K35|C Chain C, Crystal Structure Of Human Sirt6
pdb|3K35|D Chain D, Crystal Structure Of Human Sirt6
pdb|3K35|E Chain E, Crystal Structure Of Human Sirt6
pdb|3K35|F Chain F, Crystal Structure Of Human Sirt6
Length = 318
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 48/112 (42%), Gaps = 23/112 (20%)
Query: 19 GISAESGIPTFRGDGGWWRNNHVAHIANIESFKENPGRVWAFYNYRRQQAASKAPNKAHY 78
GIS SGIP FRG G W +E P F + R P + H
Sbjct: 54 GISTASGIPDFRGPHGVW---------TMEERGLAPKFDTTFESAR--------PTQTHM 96
Query: 79 ALARFEEECIRQNKSFVLFTQNVDGYHQAAG--SRNVIELHGSLWRTKCSWC 128
AL + E R L +QNVDG H +G + ELHG+++ +C+ C
Sbjct: 97 ALVQLE----RVGLLRFLVSQNVDGLHVRSGFPRDKLAELHGNMFVEECAKC 144
>pdb|4IAO|A Chain A, Crystal Structure Of Sir2 C543s Mutant In Complex With Sid
Domain Of Sir4
pdb|4IAO|B Chain B, Crystal Structure Of Sir2 C543s Mutant In Complex With Sid
Domain Of Sir4
Length = 492
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 82/200 (41%), Gaps = 30/200 (15%)
Query: 19 GISAESGIPTFRGDGGWW-RNNHVA-----HIANIESFKENPGRVWAFYNYRRQQAASKA 72
G+S GIP FR G++ + H+ + N F +P FYN
Sbjct: 194 GVSTSLGIPDFRSSEGFYSKIKHLGLDDPQDVFNYNIFMHDPS---VFYNIANMVL---P 247
Query: 73 PNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAG--SRNVIELHGSLWRTKCSWC-- 128
P K + L F + + K +TQN+D AG + +++ HGS C C
Sbjct: 248 PEKIYSPLHSFIKMLQMKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHW 307
Query: 129 --------DKVEENRKIPIVPVL----DEAICNPNASDVWYSDEEINVNDLPRCSDKACG 176
+K+ N ++P+ P E + V + + ++++ P +
Sbjct: 308 NLPGERIFNKI-RNLELPLCPYCYKKRREYFPEGYNNKVGVAASQGSMSERPPYILNSY- 365
Query: 177 GLLRPDIVWFGEQLNPQYVK 196
G+L+PDI +FGE L ++ K
Sbjct: 366 GVLKPDITFFGEALPNKFHK 385
>pdb|2HJH|A Chain A, Crystal Structure Of The Sir2 Deacetylase
pdb|2HJH|B Chain B, Crystal Structure Of The Sir2 Deacetylase
Length = 354
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/200 (24%), Positives = 81/200 (40%), Gaps = 30/200 (15%)
Query: 19 GISAESGIPTFRGDGGWW-RNNHVA-----HIANIESFKENPGRVWAFYNYRRQQAASKA 72
G+S GIP FR G++ + H+ + N F +P FYN
Sbjct: 56 GVSTSLGIPDFRSSEGFYSKIKHLGLDDPQDVFNYNIFXHDPS---VFYNIANXVL---P 109
Query: 73 PNKAHYALARFEEECIRQNKSFVLFTQNVDGYHQAAG--SRNVIELHGSLWRTKCSWC-- 128
P K + L F + + K +TQN+D AG + +++ HGS C C
Sbjct: 110 PEKIYSPLHSFIKXLQXKGKLLRNYTQNIDNLESYAGISTDKLVQCHGSFATATCVTCHW 169
Query: 129 --------DKVEENRKIPIVPVL----DEAICNPNASDVWYSDEEINVNDLPRCSDKACG 176
+K+ N ++P+ P E + V + + + ++ P +
Sbjct: 170 NLPGERIFNKI-RNLELPLCPYCYKKRREYFPEGYNNKVGVAASQGSXSERPPYILNS-Y 227
Query: 177 GLLRPDIVWFGEQLNPQYVK 196
G+L+PDI +FGE L ++ K
Sbjct: 228 GVLKPDITFFGEALPNKFHK 247
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.135 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,592,950
Number of Sequences: 62578
Number of extensions: 273403
Number of successful extensions: 542
Number of sequences better than 100.0: 36
Number of HSP's better than 100.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 448
Number of HSP's gapped (non-prelim): 47
length of query: 198
length of database: 14,973,337
effective HSP length: 94
effective length of query: 104
effective length of database: 9,091,005
effective search space: 945464520
effective search space used: 945464520
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)