Your job contains 1 sequence.
>psy14113
TLHYSEKAKYLDAKCKPVGAIESFLVEGTSRAPAPPPVDYKQYERGNIIASSKFATPKSV
DNLPLADVYRSNGSAKPGPVSPSGSSKDSNSPRASVATVPSPLYENVDYYNGRNAALTPP
YYHQLPHLRSGSHSSVGSQDSKHSSPRGSYVSNDINAFQFDRKAQPQVPQGLKYIRDYPP
YEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVKTAT
SLSVTPNYQVSSPVDTTPSPSPSPKTPVTPYGKNLLPYNVTPPRPMGPTEAERKIEELTR
QLEEEMEKQEEEGEYFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFY
NVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIMEMILQAM
GKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE
TVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLSHLSRHHQSPTDL
QDV
The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy14113
(543 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0030530 - symbol:jub "Ajuba LIM protein" species:7... 747 8.3e-88 4
UNIPROTKB|A9LS46 - symbol:wtip "Wilms tumor protein 1-int... 623 5.4e-63 2
UNIPROTKB|A6NIX2 - symbol:WTIP "Wilms tumor protein 1-int... 605 5.4e-61 2
UNIPROTKB|K7ENH9 - symbol:WTIP "Wilms tumor protein 1-int... 605 5.4e-61 2
MGI|MGI:2141920 - symbol:Wtip "WT1-interacting protein" s... 618 2.4e-60 1
UNIPROTKB|F1NIC6 - symbol:WTIP "Uncharacterized protein" ... 617 3.1e-60 1
UNIPROTKB|E1BP33 - symbol:E1BP33 "Uncharacterized protein... 613 8.1e-60 1
RGD|1306411 - symbol:Wtip "Wilms tumor 1 interacting prot... 612 1.0e-59 1
ZFIN|ZDB-GENE-050419-261 - symbol:wtip "Wilms tumor 1 int... 606 4.5e-59 1
UNIPROTKB|F1NK57 - symbol:LIMD1 "Uncharacterized protein"... 603 9.3e-59 1
RGD|1309830 - symbol:Limd1 "LIM domains containing 1" spe... 597 4.0e-58 1
UNIPROTKB|G5E5X0 - symbol:LIMD1 "LIM domain-containing pr... 596 5.1e-58 1
MGI|MGI:1352502 - symbol:Limd1 "LIM domains containing 1"... 596 5.1e-58 1
UNIPROTKB|Q9UGP4 - symbol:LIMD1 "LIM domain-containing pr... 596 5.1e-58 1
UNIPROTKB|B7ZUL2 - symbol:limd1 "LIM domain-containing pr... 596 5.1e-58 1
UNIPROTKB|E2RQV5 - symbol:LIMD1 "Uncharacterized protein"... 595 6.6e-58 1
RGD|620407 - symbol:Ajuba "ajuba LIM protein" species:101... 567 4.2e-57 2
UNIPROTKB|Q06BR1 - symbol:limd1 "LIM domain-containing pr... 587 4.6e-57 1
UNIPROTKB|E1BKA3 - symbol:AJUBA "LIM domain-containing pr... 562 8.8e-57 2
MGI|MGI:1341886 - symbol:Ajuba "ajuba LIM protein" specie... 562 1.4e-56 2
UNIPROTKB|Q96IF1 - symbol:AJUBA "LIM domain-containing pr... 558 3.8e-56 2
UNIPROTKB|I3L8V8 - symbol:AJUBA "Uncharacterized protein"... 558 5.5e-54 1
ZFIN|ZDB-GENE-030131-9341 - symbol:ajuba "ajuba LIM prote... 546 1.0e-52 1
UNIPROTKB|F1PTW0 - symbol:WTIP "Uncharacterized protein" ... 535 1.5e-51 1
UNIPROTKB|E1C3G9 - symbol:WTIP "Uncharacterized protein" ... 515 2.0e-49 1
UNIPROTKB|J9NXN4 - symbol:WTIP "Uncharacterized protein" ... 490 8.8e-47 1
UNIPROTKB|K7EKM1 - symbol:WTIP "Wilms tumor protein 1-int... 486 2.3e-46 1
UNIPROTKB|E1BMD6 - symbol:LPP "Uncharacterized protein" s... 419 2.5e-45 3
RGD|1310535 - symbol:Lpp "LIM domain containing preferred... 418 2.6e-45 3
UNIPROTKB|Q5XI07 - symbol:Lpp "Lipoma-preferred partner h... 418 2.6e-45 3
UNIPROTKB|E2R8L1 - symbol:AJUBA "Uncharacterized protein"... 460 5.8e-45 2
UNIPROTKB|Q15654 - symbol:TRIP6 "Thyroid receptor-interac... 435 3.7e-44 2
UNIPROTKB|Q5F464 - symbol:LPP "Lipoma-preferred partner h... 424 4.7e-44 2
MGI|MGI:1343458 - symbol:Trip6 "thyroid hormone receptor ... 433 9.6e-44 2
UNIPROTKB|I3LCI1 - symbol:TRIP6 "Uncharacterized protein"... 434 4.1e-43 2
UNIPROTKB|Q3SX26 - symbol:TRIP6 "Thyroid receptor-interac... 429 6.7e-43 2
ZFIN|ZDB-GENE-040426-918 - symbol:lpp "LIM domain contain... 428 1.4e-42 2
UNIPROTKB|E2RPC5 - symbol:TRIP6 "Uncharacterized protein"... 427 2.8e-42 2
UNIPROTKB|F1LSB9 - symbol:Lpp "Lipoma-preferred partner h... 418 5.3e-42 2
UNIPROTKB|A5H447 - symbol:zyx "Zyxin" species:8355 "Xenop... 406 1.7e-41 3
UNIPROTKB|B4DQR8 - symbol:ZYX "cDNA FLJ53160, highly simi... 384 1.8e-41 3
UNIPROTKB|H0Y2Y8 - symbol:ZYX "Zyxin" species:9606 "Homo ... 384 1.8e-41 3
UNIPROTKB|E2RSJ3 - symbol:LPP "Uncharacterized protein" s... 419 2.3e-41 2
MGI|MGI:2441849 - symbol:Lpp "LIM domain containing prefe... 417 3.9e-41 2
UNIPROTKB|Q93052 - symbol:LPP "Lipoma-preferred partner" ... 416 4.1e-41 2
UNIPROTKB|Q15942 - symbol:ZYX "Zyxin" species:9606 "Homo ... 384 6.3e-41 3
FB|FBgn0011642 - symbol:Zyx "Zyxin" species:7227 "Drosoph... 407 1.1e-40 2
UNIPROTKB|Q08DQ6 - symbol:ZYX "Zyxin" species:9913 "Bos t... 386 1.1e-40 3
UNIPROTKB|F1P7F8 - symbol:ZYX "Uncharacterized protein" s... 378 6.5e-40 3
UNIPROTKB|Q9U3F4 - symbol:zyx-1 "Protein ZYX-1, isoform a... 399 5.2e-39 2
UNIPROTKB|Q04584 - symbol:ZYX "Zyxin" species:9031 "Gallu... 384 1.3e-38 2
UNIPROTKB|Q0VA45 - symbol:zyx "Zyxin" species:8364 "Xenop... 393 1.6e-38 2
UNIPROTKB|B4DQX7 - symbol:ZYX "Zyxin, isoform CRA_a" spec... 384 1.7e-38 2
UNIPROTKB|F1SRV9 - symbol:ZYX "Uncharacterized protein" s... 383 4.5e-38 2
UNIPROTKB|F1SUU4 - symbol:FBLIM1 "Uncharacterized protein... 344 1.3e-37 3
UNIPROTKB|D4A7U1 - symbol:Zyx "Protein Zyx" species:10116... 379 2.6e-37 2
MGI|MGI:103072 - symbol:Zyx "zyxin" species:10090 "Mus mu... 379 2.6e-37 2
UNIPROTKB|H7BZE2 - symbol:TRIP6 "Thyroid receptor-interac... 396 8.0e-37 1
ZFIN|ZDB-GENE-070928-18 - symbol:zyx "zyxin" species:7955... 376 1.0e-36 2
UNIPROTKB|Q1JQB5 - symbol:FBLIM1 "Filamin-binding LIM pro... 338 2.2e-36 3
MGI|MGI:1921452 - symbol:Fblim1 "filamin binding LIM prot... 352 2.4e-35 2
UNIPROTKB|C9JRJ5 - symbol:LIMD1 "LIM domain-containing pr... 381 9.6e-35 1
UNIPROTKB|E1BV36 - symbol:FBLIM1 "Uncharacterized protein... 348 1.3e-34 2
WB|WBGene00006999 - symbol:zyx-1 species:6239 "Caenorhabd... 360 4.2e-34 2
UNIPROTKB|E2R5M1 - symbol:FBLIM1 "Uncharacterized protein... 338 5.6e-34 2
UNIPROTKB|Q8WUP2 - symbol:FBLIM1 "Filamin-binding LIM pro... 333 1.1e-33 2
UNIPROTKB|G3V481 - symbol:AJUBA "LIM domain-containing pr... 352 3.7e-32 1
UNIPROTKB|E1C4X1 - symbol:FBLIM1 "Uncharacterized protein... 348 9.8e-32 1
UNIPROTKB|Q5REN1 - symbol:FBLIM1 "Filamin-binding LIM pro... 337 1.4e-30 1
UNIPROTKB|F1SRU2 - symbol:F1SRU2 "Uncharacterized protein... 301 1.6e-26 1
ZFIN|ZDB-GENE-061013-662 - symbol:zgc:154176 "zgc:154176"... 297 4.8e-26 1
UNIPROTKB|Q5U1Y3 - symbol:Fblim1 "Protein Fblim1" species... 271 1.0e-25 2
UNIPROTKB|G3V5F5 - symbol:AJUBA "LIM domain-containing pr... 286 8.6e-25 1
UNIPROTKB|F1LM06 - symbol:Zyx "Protein Zyx" species:10116... 248 1.5e-20 1
RGD|620698 - symbol:Zyx "zyxin" species:10116 "Rattus nor... 222 1.1e-17 1
ZFIN|ZDB-GENE-081105-159 - symbol:si:rp71-15d4.1 "si:rp71... 218 3.6e-15 1
FB|FBgn0051988 - symbol:CG31988 species:7227 "Drosophila ... 192 2.1e-14 1
UNIPROTKB|Q28WK7 - symbol:GA15635 "GA15635" species:46245... 207 7.9e-14 3
FB|FBgn0051624 - symbol:CG31624 species:7227 "Drosophila ... 184 1.5e-13 1
UNIPROTKB|J9P1P8 - symbol:FHL5 "Uncharacterized protein" ... 150 1.6e-13 2
UNIPROTKB|Q2YDK0 - symbol:FHL5 "Four and a half LIM domai... 145 1.9e-13 2
UNIPROTKB|F1RY03 - symbol:FHL5 "Uncharacterized protein" ... 146 3.8e-13 2
UNIPROTKB|F1PUC6 - symbol:LIMS2 "Uncharacterized protein"... 146 4.9e-13 2
FB|FBgn0083919 - symbol:Zasp52 "Z band alternatively spli... 197 5.5e-13 3
UNIPROTKB|E2RNC7 - symbol:LIMS2 "Uncharacterized protein"... 152 6.4e-13 2
UNIPROTKB|F1RQH7 - symbol:LIMS2 "Uncharacterized protein"... 152 8.4e-13 2
ZFIN|ZDB-GENE-040808-49 - symbol:fhl2a "four and a half L... 156 9.2e-13 2
WB|WBGene00016197 - symbol:pxl-1 species:6239 "Caenorhabd... 195 1.3e-12 2
UNIPROTKB|Q09476 - symbol:pxl-1 "Paxillin homolog 1" spec... 195 1.3e-12 2
ZFIN|ZDB-GENE-030131-8356 - symbol:zgc:63514 "zgc:63514" ... 189 1.4e-12 1
UNIPROTKB|Q14192 - symbol:FHL2 "Four and a half LIM domai... 148 2.1e-12 2
ZFIN|ZDB-GENE-080219-41 - symbol:ablim1a "actin binding L... 197 2.5e-12 1
ZFIN|ZDB-GENE-040822-3 - symbol:zgc:92375 "zgc:92375" spe... 161 2.5e-12 2
FB|FBgn0013751 - symbol:Awh "Arrowhead" species:7227 "Dro... 183 5.1e-12 1
ZFIN|ZDB-GENE-041010-121 - symbol:fhl2b "four and a half ... 156 8.8e-12 2
UNIPROTKB|J3KNW4 - symbol:FHL2 "Four and a half LIM domai... 148 1.2e-11 2
RGD|1307056 - symbol:Fhl5 "four and a half LIM domains 5"... 145 1.4e-11 2
MGI|MGI:1913192 - symbol:Fhl5 "four and a half LIM domain... 144 1.5e-11 2
ASPGD|ASPL0000012160 - symbol:AN3659 species:162425 "Emer... 189 2.6e-11 2
DICTYBASE|DDB_G0284863 - symbol:limB "LIM-type zinc finge... 186 2.8e-11 1
WARNING: Descriptions of 539 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0030530 [details] [associations]
symbol:jub "Ajuba LIM protein" species:7227 "Drosophila
melanogaster" [GO:0016922 "ligand-dependent nuclear receptor
binding" evidence=ISS] [GO:0046966 "thyroid hormone receptor
binding" evidence=ISS] [GO:0003779 "actin binding" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005912 "adherens
junction" evidence=IDA] [GO:0046622 "positive regulation of organ
growth" evidence=IMP] [GO:0035329 "hippo signaling cascade"
evidence=IMP] [GO:0045572 "positive regulation of imaginal disc
growth" evidence=IMP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0035329
GO:GO:0003779 GO:GO:0046872 EMBL:AE014298 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0005912 GeneTree:ENSGT00610000085810
EMBL:AY070556 EMBL:BT014658 RefSeq:NP_572930.3 HSSP:P04006
ProteinModelPortal:Q9VY77 SMR:Q9VY77 IntAct:Q9VY77
MINT:MINT-1600388 STRING:Q9VY77 PRIDE:Q9VY77
EnsemblMetazoa:FBtr0073834 GeneID:32351 KEGG:dme:Dmel_CG11063
UCSC:CG11063-RB CTD:16475 FlyBase:FBgn0030530 eggNOG:NOG331290
InParanoid:Q9VY77 KO:K16682 OMA:ANLHRNT OrthoDB:EOG4CVDPX
PhylomeDB:Q9VY77 GenomeRNAi:32351 NextBio:778062 Bgee:Q9VY77
GO:GO:0045572 Uniprot:Q9VY77
Length = 728
Score = 747 (268.0 bits), Expect = 8.3e-88, Sum P(4) = 8.3e-88
Identities = 142/211 (67%), Positives = 159/211 (75%)
Query: 341 HTNCF-ICCSCGRALRGKA-FYNVHGRVYCEEDYLYSGFQQTAEKCA---ICGHLIME-- 393
H F IC +CG ++G G +Y ++ + A + G + E
Sbjct: 509 HGEYFGICHTCGEKVKGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEED 568
Query: 394 -MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIY 452
MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCC+CNECLDGVPFTVDVD+KIY
Sbjct: 569 YMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDGVPFTVDVDHKIY 628
Query: 453 CVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR 512
CVNDYHRMFAPKCA+CGKGITPVEGT+ETVRVVSMDKDFHVDCY+CE+CG+QLTDEPDKR
Sbjct: 629 CVNDYHRMFAPKCASCGKGITPVEGTDETVRVVSMDKDFHVDCYICEECGMQLTDEPDKR 688
Query: 513 CYPLQGRLMCRACHLSHL----SRH--HQSP 537
CYPL GRL+CR CHL L S H HQ P
Sbjct: 689 CYPLDGRLLCRGCHLQRLALQSSPHARHQEP 719
Score = 573 (206.8 bits), Expect = 1.5e-66, Sum P(3) = 1.5e-66
Identities = 127/282 (45%), Positives = 151/282 (53%)
Query: 213 MAIALTSPPVYSRANT--VTSKAVPVKTA----TSLSVTPNYQXXXXXXXXXXXXXXXXX 266
M +A +PP S A T + A P TA T +++T
Sbjct: 402 MGMATAAPPTTSNAPTSAAAAPAAPTSTASLRATPIAMTAPLAVATSPTPSQGSTAVNAA 461
Query: 267 XXXXYG--KNLLPYNVTPPRPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGE 324
G KNLLPY+VTPPRP GPTEA+RKI YFGICHTCGE
Sbjct: 462 LKPRRGLTKNLLPYSVTPPRPAGPTEAQRKIEELTRQLEEEIEQSEEHGEYFGICHTCGE 521
Query: 325 KVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKC 384
KV GAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY+YSGFQQTAEKC
Sbjct: 522 KVKGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYMYSGFQQTAEKC 581
Query: 385 AICGHLIMEMY-----SGFQQTAEKCAICGHLI--MEMILQAMGKSY----HPGCF--RC 431
AICGHLIMEM + +C +C + + + K Y + F +C
Sbjct: 582 AICGHLIMEMILQAMGKSYHPGCFRCCVCNECLDGVPFTVDVDHKIYCVNDYHRMFAPKC 641
Query: 432 CLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGIT 473
C + + V T + + D+H + C CG +T
Sbjct: 642 ASCGKGITPVEGTDETVRVVSMDKDFH-VDCYICEECGMQLT 682
Score = 95 (38.5 bits), Expect = 8.3e-88, Sum P(4) = 8.3e-88
Identities = 17/25 (68%), Positives = 22/25 (88%)
Query: 39 DYKQYERGNIIASSKFATPKSVDNL 63
DYK YERGNIIA+SK+ATP+ V+ +
Sbjct: 90 DYKLYERGNIIAASKYATPRPVEQI 114
Score = 39 (18.8 bits), Expect = 8.3e-88, Sum P(4) = 8.3e-88
Identities = 6/15 (40%), Positives = 12/15 (80%)
Query: 101 SPLYENVDYYNGRNA 115
+P+YEN+ ++G+ A
Sbjct: 232 APIYENIIPHSGQRA 246
Score = 38 (18.4 bits), Expect = 8.3e-88, Sum P(4) = 8.3e-88
Identities = 14/57 (24%), Positives = 20/57 (35%)
Query: 183 APPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVKTA 239
APP N P P R IA+T+P + + T + + V A
Sbjct: 408 APPTTSNAPT---SAAAAPAAPTSTASLRATPIAMTAPLAVATSPTPSQGSTAVNAA 461
Score = 38 (18.4 bits), Expect = 1.1e-84, Sum P(3) = 1.1e-84
Identities = 24/74 (32%), Positives = 31/74 (41%)
Query: 180 PYEAPPVYENIQ---ELNKPPKPG-PQVPVFGGEHRQMAIA---LTSPPVYSRANTVTSK 232
P + PVYEN++ + + K PQ P G RQ AI L P+ RA
Sbjct: 138 PQKHSPVYENLEFYGQFDSNHKRAQPQSP---GS-RQSAILNGYLLMQPI--RAGRFAHT 191
Query: 233 AVPVKTAT-SLSVT 245
VP + SL T
Sbjct: 192 PVPENQGSASLGTT 205
>UNIPROTKB|A9LS46 [details] [associations]
symbol:wtip "Wilms tumor protein 1-interacting protein
homolog" species:8355 "Xenopus laevis" [GO:0003714 "transcription
corepressor activity" evidence=IMP] [GO:0007010 "cytoskeleton
organization" evidence=ISS] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0022604 "regulation of cell
morphogenesis" evidence=ISS] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0003714 GO:GO:0007010 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:2.10.110.10 GO:GO:0005912
KO:K16682 GO:GO:0014032 GO:GO:0022604 CTD:126374 EMBL:EU257484
RefSeq:NP_001106366.1 UniGene:Xl.14482 ProteinModelPortal:A9LS46
GeneID:100127345 KEGG:xla:100127345 Xenbase:XB-GENE-1193823
HOVERGEN:HBG108680 Uniprot:A9LS46
Length = 690
Score = 623 (224.4 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 114/203 (56%), Positives = 143/203 (70%)
Query: 346 ICCSCGRALRGKA-FYNVHGRVYCEEDYLYSGFQQTAEKCA---ICGHLIME---MYSGF 398
IC CG+ + G + G +Y + + A + G + E +YSGF
Sbjct: 480 ICIKCGKGVYGASQACQAMGNLYHTNCFTCCSCGRRLRGKAFYNVNGKVYCEEDFLYSGF 539
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
QQTA+KC +CGHLIMEMILQA+GKSYHPGCFRC +CNECLDGVPFTVDV+N IYCV DYH
Sbjct: 540 QQTADKCFVCGHLIMEMILQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCVKDYH 599
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
+FAPKCA+C + I P +G+EET+RVVSMDKD+HV+CY CEDC LQL DE +RCYPL+G
Sbjct: 600 TVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVECYHCEDCQLQLNDEEGRRCYPLEG 659
Query: 519 RLMCRACHLSHLSRH---HQSPT 538
L+C +CH+ LS + HQ P+
Sbjct: 660 HLLCHSCHIRRLSVNVPPHQPPS 682
Score = 448 (162.8 bits), Expect = 8.3e-44, Sum P(2) = 8.3e-44
Identities = 103/257 (40%), Positives = 135/257 (52%)
Query: 276 LPYNVTPPRPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQA 335
LPY VTP R GP++AER++ YFGIC CG+ V GA QACQA
Sbjct: 439 LPYQVTPSRESGPSQAERRLEALTLELEKELELHMKKE-YFGICIKCGKGVYGASQACQA 497
Query: 336 MGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMY 395
MGNLYHTNCF CCSCGR LRGKAFYNV+G+VYCEED+LYSGFQQTA+KC +CGHLIMEM
Sbjct: 498 MGNLYHTNCFTCCSCGRRLRGKAFYNVNGKVYCEEDFLYSGFQQTADKCFVCGHLIMEMI 557
Query: 396 -----SGFQQTAEKCAICGHLI--------MEMILQAMGKSYHPGCF--RCCLCNECLDG 440
+ +C +C + +E + + K YH F +C CN+ +
Sbjct: 558 LQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCV-KDYHT-VFAPKCASCNQPILP 615
Query: 441 VPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCED 500
+ + + DYH + C C + EG R ++ H+ C+ C
Sbjct: 616 AQGSEETIRVVSMDKDYH-VECYHCEDCQLQLNDEEGR----RCYPLEG--HLLCHSCHI 668
Query: 501 CGLQLTDEPDKR-CYPL 516
L + P + YP+
Sbjct: 669 RRLSVNVPPHQPPSYPM 685
Score = 38 (18.4 bits), Expect = 5.4e-63, Sum P(2) = 5.4e-63
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 23 SFLVEGTSRAPAPPPVDYKQYERGNIIASSKFATPKS 59
S +V G P QYE G + S +A+ S
Sbjct: 196 SLVVPGQQEKYTSPRSSLGQYEGGVLSPRSSYASTTS 232
>UNIPROTKB|A6NIX2 [details] [associations]
symbol:WTIP "Wilms tumor protein 1-interacting protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005912 "adherens junction" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IMP] [GO:0022604 "regulation
of cell morphogenesis" evidence=IMP] [GO:2000637 "positive
regulation of gene silencing by miRNA" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] [GO:0035331 "negative regulation of
hippo signaling cascade" evidence=IDA] [GO:0001666 "response to
hypoxia" evidence=IDA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IDA] [GO:0035195 "gene silencing by miRNA"
evidence=IMP] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0003714
GO:GO:0007010 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0001666 GO:GO:0006351 Gene3D:2.10.110.10 GO:GO:0005912
GO:GO:0000932 GO:GO:0035195 GO:GO:0035331 GO:GO:2000637
eggNOG:NOG331290 KO:K16682 GO:GO:0022604 HOGENOM:HOG000007533
OrthoDB:EOG42BX96 EMBL:AC008747 IPI:IPI00787845
RefSeq:NP_001073905.1 UniGene:Hs.585010 ProteinModelPortal:A6NIX2
SMR:A6NIX2 STRING:A6NIX2 PaxDb:A6NIX2 PRIDE:A6NIX2
Ensembl:ENST00000270288 GeneID:126374 KEGG:hsa:126374
UCSC:uc002nvm.3 CTD:126374 GeneCards:GC19P034971 HGNC:HGNC:20964
MIM:614790 neXtProt:NX_A6NIX2 HOVERGEN:HBG108679 InParanoid:A6NIX2
GenomeRNAi:126374 Bgee:A6NIX2 CleanEx:HS_WTIP Genevestigator:A6NIX2
Uniprot:A6NIX2
Length = 430
Score = 605 (218.0 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 100/137 (72%), Positives = 117/137 (85%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQTA+KC++CGHLIMEMILQA+GKSYHPGCFRC +CNECLDGVPFTVDV+N IYC
Sbjct: 279 LYSGFQQTADKCSVCGHLIMEMILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYC 338
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH +FAPKCA+C + I P +G E T+RVVSMD+D+HV CY CEDCGLQL+ E +RC
Sbjct: 339 VRDYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVACYHCEDCGLQLSGEEGRRC 398
Query: 514 YPLQGRLMCRACHLSHL 530
YPL G L+CR CHL L
Sbjct: 399 YPLAGHLLCRRCHLRRL 415
Score = 378 (138.1 bits), Expect = 4.0e-37, Sum P(2) = 4.0e-37
Identities = 89/220 (40%), Positives = 115/220 (52%)
Query: 276 LPYNVTPP-RPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP PP R GP+ AER++ YFGIC CG + GA QACQ
Sbjct: 182 LPALPLPPGREGGPSAAERRLEALTRELERALEARTARD-YFGICIKCGLGIYGAQQACQ 240
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMG+LYHT+CF C SCGR LRGKAFYNV +VYC+ED+LYSGFQQTA+KC++CGHLIMEM
Sbjct: 241 AMGSLYHTDCFTCDSCGRRLRGKAFYNVGEKVYCQEDFLYSGFQQTADKCSVCGHLIMEM 300
Query: 395 Y-----SGFQQTAEKCAICGHLI--------MEMILQAMGKSYH----PGCFRCCLCNEC 437
+ +C++C + +E + + + YH P C C
Sbjct: 301 ILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYCV-RDYHTVFAPKCASCARPILP 359
Query: 438 LDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
G T+ V + DYH + C CG ++ EG
Sbjct: 360 AQGCETTIRV---VSMDRDYH-VACYHCEDCGLQLSGEEG 395
Score = 37 (18.1 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 19 GAIESFLVEGTSRAPAPPP 37
GA FL G APA P
Sbjct: 154 GAYADFLPPGACPAPARSP 172
>UNIPROTKB|K7ENH9 [details] [associations]
symbol:WTIP "Wilms tumor protein 1-interacting protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS50023
SMART:SM00132 Gene3D:2.10.110.10 EMBL:AC008747 HGNC:HGNC:20964
Ensembl:ENST00000590071 Uniprot:K7ENH9
Length = 617
Score = 605 (218.0 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 100/137 (72%), Positives = 117/137 (85%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQTA+KC++CGHLIMEMILQA+GKSYHPGCFRC +CNECLDGVPFTVDV+N IYC
Sbjct: 466 LYSGFQQTADKCSVCGHLIMEMILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYC 525
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH +FAPKCA+C + I P +G E T+RVVSMD+D+HV CY CEDCGLQL+ E +RC
Sbjct: 526 VRDYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVACYHCEDCGLQLSGEEGRRC 585
Query: 514 YPLQGRLMCRACHLSHL 530
YPL G L+CR CHL L
Sbjct: 586 YPLAGHLLCRRCHLRRL 602
Score = 378 (138.1 bits), Expect = 3.8e-36, Sum P(2) = 3.8e-36
Identities = 89/220 (40%), Positives = 115/220 (52%)
Query: 276 LPYNVTPP-RPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP PP R GP+ AER++ YFGIC CG + GA QACQ
Sbjct: 369 LPALPLPPGREGGPSAAERRLEALTRELERALEARTARD-YFGICIKCGLGIYGAQQACQ 427
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMG+LYHT+CF C SCGR LRGKAFYNV +VYC+ED+LYSGFQQTA+KC++CGHLIMEM
Sbjct: 428 AMGSLYHTDCFTCDSCGRRLRGKAFYNVGEKVYCQEDFLYSGFQQTADKCSVCGHLIMEM 487
Query: 395 Y-----SGFQQTAEKCAICGHLI--------MEMILQAMGKSYH----PGCFRCCLCNEC 437
+ +C++C + +E + + + YH P C C
Sbjct: 488 ILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYCV-RDYHTVFAPKCASCARPILP 546
Query: 438 LDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
G T+ V + DYH + C CG ++ EG
Sbjct: 547 AQGCETTIRV---VSMDRDYH-VACYHCEDCGLQLSGEEG 582
Score = 37 (18.1 bits), Expect = 5.4e-61, Sum P(2) = 5.4e-61
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 19 GAIESFLVEGTSRAPAPPP 37
GA FL G APA P
Sbjct: 341 GAYADFLPPGACPAPARSP 359
>MGI|MGI:2141920 [details] [associations]
symbol:Wtip "WT1-interacting protein" species:10090 "Mus
musculus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0001666 "response to hypoxia" evidence=ISO]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0022604 "regulation of cell morphogenesis"
evidence=ISO] [GO:0030054 "cell junction" evidence=IEA] [GO:0031047
"gene silencing by RNA" evidence=IEA] [GO:0035195 "gene silencing
by miRNA" evidence=ISO] [GO:0035331 "negative regulation of hippo
signaling cascade" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:2000637 "positive regulation of gene silencing by
miRNA" evidence=ISO] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:2141920
GO:GO:0005634 GO:GO:0003714 GO:GO:0007010 GO:GO:0006355
GO:GO:0046872 GO:GO:0008270 GO:GO:0001666 GO:GO:0006351
Gene3D:2.10.110.10 GO:GO:0005912 GO:GO:0000932 GO:GO:0035195
GeneTree:ENSGT00610000085810 GO:GO:0035331 GO:GO:2000637
eggNOG:NOG331290 KO:K16682 GO:GO:0022604 HSSP:P25801
HOGENOM:HOG000007533 OrthoDB:EOG42BX96 CTD:126374
HOVERGEN:HBG108679 EMBL:BX539331 EMBL:BC042762 EMBL:BC054125
IPI:IPI00347143 RefSeq:NP_997095.1 UniGene:Mm.422738
ProteinModelPortal:Q7TQJ8 SMR:Q7TQJ8 DIP:DIP-59507N STRING:Q7TQJ8
PRIDE:Q7TQJ8 Ensembl:ENSMUST00000038537 GeneID:101543
KEGG:mmu:101543 UCSC:uc009gis.1 InParanoid:Q7TQJ8 OMA:SAGACAD
NextBio:355004 Bgee:Q7TQJ8 Genevestigator:Q7TQJ8 Uniprot:Q7TQJ8
Length = 398
Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
Identities = 113/197 (57%), Positives = 135/197 (68%)
Query: 346 ICCSCGRALRG-KAFYNVHGRVY---------CEEDYLYSGFQQTAEKCAICGHLIMEMY 395
IC CG + G + G +Y C F EK C + Y
Sbjct: 192 ICIKCGLGIYGARQACQAMGSLYHTDCFICDSCGRRLRGKAFYNVGEK-VYCQEDFL--Y 248
Query: 396 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVN 455
SGFQQTA+KC++CGHLIMEMILQA+GKSYHPGCFRC +CNECLDGVPFTVDVDN IYCV
Sbjct: 249 SGFQQTADKCSVCGHLIMEMILQALGKSYHPGCFRCSVCNECLDGVPFTVDVDNNIYCVR 308
Query: 456 DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYP 515
DYH +FAPKCA+C + I P +G E T+RVVSMD+D+HV+CY CEDCGLQL+ E +RCYP
Sbjct: 309 DYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVECYHCEDCGLQLSGEEGRRCYP 368
Query: 516 LQGRLMCRACHLSHLSR 532
L+G L+CR CHL L +
Sbjct: 369 LEGHLLCRRCHLRRLGQ 385
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 89/219 (40%), Positives = 114/219 (52%)
Query: 276 LPYNVTPP-RPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP PP R GP+ AER++ YFGIC CG + GA QACQ
Sbjct: 150 LPSLPLPPGREGGPSAAERRLEALTRELERALEARTARD-YFGICIKCGLGIYGARQACQ 208
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMG+LYHT+CFIC SCGR LRGKAFYNV +VYC+ED+LYSGFQQTA+KC++CGHLIMEM
Sbjct: 209 AMGSLYHTDCFICDSCGRRLRGKAFYNVGEKVYCQEDFLYSGFQQTADKCSVCGHLIMEM 268
Query: 395 Y-----SGFQQTAEKCAICGHLI--MEMILQAMG-----KSYH----PGCFRCCLCNECL 438
+ +C++C + + + + YH P C C
Sbjct: 269 ILQALGKSYHPGCFRCSVCNECLDGVPFTVDVDNNIYCVRDYHTVFAPKCASCARPILPA 328
Query: 439 DGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
G T+ V + DYH + C CG ++ EG
Sbjct: 329 QGCETTIRV---VSMDRDYH-VECYHCEDCGLQLSGEEG 363
>UNIPROTKB|F1NIC6 [details] [associations]
symbol:WTIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0022604 "regulation of cell
morphogenesis" evidence=IEA] [GO:0035195 "gene silencing by miRNA"
evidence=IEA] [GO:0035331 "negative regulation of hippo signaling
cascade" evidence=IEA] [GO:2000637 "positive regulation of gene
silencing by miRNA" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0003714
GO:GO:0007010 GO:GO:0046872 GO:GO:0008270 GO:GO:0001666
Gene3D:2.10.110.10 GO:GO:0000932 GO:GO:0035195
GeneTree:ENSGT00610000085810 GO:GO:0035331 GO:GO:2000637
GO:GO:0022604 EMBL:AADN02031801 EMBL:AADN02031802 EMBL:AADN02031803
EMBL:AADN02031804 EMBL:AADN02031805 EMBL:AADN02031806
EMBL:AADN02031807 EMBL:AADN02031808 EMBL:AADN02031809
EMBL:AADN02031810 IPI:IPI00574034 Ensembl:ENSGALT00000007957
OMA:CHGCHIR ArrayExpress:F1NIC6 Uniprot:F1NIC6
Length = 189
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 101/138 (73%), Positives = 119/138 (86%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQTA+KC +CGHLIMEMILQA+GKSYHPGCFRC +CNECLDGVPFTVDV+N IYC
Sbjct: 34 LYSGFQQTADKCFVCGHLIMEMILQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYC 93
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH +FAPKCA+C + I P +G+EET+RVVSMDKD+HV+CY CEDCGLQL DE RC
Sbjct: 94 VKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVECYHCEDCGLQLNDEEGHRC 153
Query: 514 YPLQGRLMCRACHLSHLS 531
YPL+G L+C CH+ L+
Sbjct: 154 YPLEGHLLCHGCHIRRLN 171
Score = 238 (88.8 bits), Expect = 1.9e-19, P = 1.9e-19
Identities = 67/197 (34%), Positives = 94/197 (47%)
Query: 337 GNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMY- 395
GN Y N GR LRGKAFYNV+G+VYCEED+LYSGFQQTA+KC +CGHLIMEM
Sbjct: 2 GNWYQYNILT----GRRLRGKAFYNVNGKVYCEEDFLYSGFQQTADKCFVCGHLIMEMIL 57
Query: 396 ----SGFQQTAEKCAICGHLI--------MEMILQAMGKSYHPGCF--RCCLCNECLDGV 441
+ +C +C + +E + + K YH F +C CN+ +
Sbjct: 58 QALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCV-KDYHT-VFAPKCASCNQPILPA 115
Query: 442 PFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCE-- 499
+ + + DYH + C CG + EG R ++ H+ C+ C
Sbjct: 116 QGSEETIRVVSMDKDYH-VECYHCEDCGLQLNDEEGH----RCYPLEG--HLLCHGCHIR 168
Query: 500 DCGLQLTDEPDKRCYPL 516
++L P YP+
Sbjct: 169 RLNIKLPSHPPPS-YPM 184
Score = 118 (46.6 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 29/84 (34%), Positives = 39/84 (46%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAF-YNVHGRVYCEEDYLYSGF 377
C CG + QA+G YH CF C C L G F +V +YC +DY ++ F
Sbjct: 45 CFVCGHLIME--MILQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCVKDY-HTVF 101
Query: 378 QQTAEKCAICGHLIMEMYSGFQQT 401
A KCA C I+ G ++T
Sbjct: 102 ---APKCASCNQPILPA-QGSEET 121
>UNIPROTKB|E1BP33 [details] [associations]
symbol:E1BP33 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000637 "positive regulation of gene silencing by
miRNA" evidence=IEA] [GO:0035331 "negative regulation of hippo
signaling cascade" evidence=IEA] [GO:0035195 "gene silencing by
miRNA" evidence=IEA] [GO:0022604 "regulation of cell morphogenesis"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0001666 "response to hypoxia" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS50023 SMART:SM00132 GO:GO:0003714 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 GO:GO:0001666 Gene3D:2.10.110.10
GO:GO:0000932 GO:GO:0035195 GeneTree:ENSGT00610000085810
GO:GO:0035331 GO:GO:2000637 GO:GO:0022604 EMBL:DAAA02046904
EMBL:DAAA02046905 IPI:IPI00711764 Ensembl:ENSBTAT00000010314
OMA:AMQRSRA Uniprot:E1BP33
Length = 539
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 112/195 (57%), Positives = 134/195 (68%)
Query: 346 ICCSCGRALRG-KAFYNVHGRVY---------CEEDYLYSGFQQTAEKCAICGHLIMEMY 395
IC CG + G + G +Y C F EK C + Y
Sbjct: 333 ICIKCGLGIYGARQACQAMGSLYHTDCFTCNSCGRRLRGKAFYNVGEK-VYCQEDFL--Y 389
Query: 396 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVN 455
SGFQQTA+KC++CGHLIMEMILQA+GKSYHPGCFRC +CNECLDGVPFTVDV+N IYCV
Sbjct: 390 SGFQQTADKCSVCGHLIMEMILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYCVR 449
Query: 456 DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYP 515
DYH +FAPKCA+C + I P +G E T+RVVSMD+D+HV+CY CEDCGLQL+ E +RCYP
Sbjct: 450 DYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVECYHCEDCGLQLSGEDGRRCYP 509
Query: 516 LQGRLMCRACHLSHL 530
L+G L+CR CHL L
Sbjct: 510 LEGHLLCRRCHLRRL 524
Score = 374 (136.7 bits), Expect = 1.7e-34, P = 1.7e-34
Identities = 88/220 (40%), Positives = 115/220 (52%)
Query: 276 LPYNVTPP-RPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP PP R GP+ AER++ YFGIC CG + GA QACQ
Sbjct: 291 LPSLQLPPGREGGPSAAERRLEALTRELERALEARTARD-YFGICIKCGLGIYGARQACQ 349
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMG+LYHT+CF C SCGR LRGKAFYNV +VYC+ED+LYSGFQQTA+KC++CGHLIMEM
Sbjct: 350 AMGSLYHTDCFTCNSCGRRLRGKAFYNVGEKVYCQEDFLYSGFQQTADKCSVCGHLIMEM 409
Query: 395 Y-----SGFQQTAEKCAICGHLI--------MEMILQAMGKSYH----PGCFRCCLCNEC 437
+ +C++C + +E + + + YH P C C
Sbjct: 410 ILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYCV-RDYHTVFAPKCASCARPILP 468
Query: 438 LDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
G T+ V + DYH + C CG ++ +G
Sbjct: 469 AQGCETTIRV---VSMDRDYH-VECYHCEDCGLQLSGEDG 504
>RGD|1306411 [details] [associations]
symbol:Wtip "Wilms tumor 1 interacting protein" species:10116
"Rattus norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0001666 "response to hypoxia"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0007010 "cytoskeleton organization"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0022604 "regulation of cell morphogenesis" evidence=IEA;ISO]
[GO:0035195 "gene silencing by miRNA" evidence=IEA;ISO] [GO:0035331
"negative regulation of hippo signaling cascade" evidence=IEA;ISO]
[GO:2000637 "positive regulation of gene silencing by miRNA"
evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS50023
SMART:SM00132 RGD:1306411 GO:GO:0003714 GO:GO:0007010 GO:GO:0046872
GO:GO:0008270 GO:GO:0001666 Gene3D:2.10.110.10 GO:GO:0000932
GO:GO:0035195 GeneTree:ENSGT00610000085810 GO:GO:0035331
GO:GO:2000637 GO:GO:0022604 IPI:IPI00389250
Ensembl:ENSRNOT00000037519 UCSC:RGD:1306411 Uniprot:F1LMC1
Length = 321
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 111/197 (56%), Positives = 135/197 (68%)
Query: 346 ICCSCGRALRG-KAFYNVHGRVY---------CEEDYLYSGFQQTAEKCAICGHLIMEMY 395
IC CG + G + G +Y C F EK C + Y
Sbjct: 115 ICIKCGLGIYGARQACQAMGSLYHTDCFICDSCGRRLRGKAFYNVGEK-VYCQEDFL--Y 171
Query: 396 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVN 455
SGFQQTA+KC++CGHLIMEMILQA+GKSYHPGCFRC +CNECLDGVPFTVDV+N IYCV
Sbjct: 172 SGFQQTADKCSVCGHLIMEMILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYCVR 231
Query: 456 DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYP 515
DYH +FAPKCA+C + I P +G E T+RVVSMD+D+HV+CY CEDCG+QL+ E +RCYP
Sbjct: 232 DYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVECYHCEDCGMQLSGEEGRRCYP 291
Query: 516 LQGRLMCRACHLSHLSR 532
L+G L+CR CHL L +
Sbjct: 292 LEGHLLCRRCHLRRLGQ 308
Score = 383 (139.9 bits), Expect = 1.9e-35, P = 1.9e-35
Identities = 90/220 (40%), Positives = 116/220 (52%)
Query: 276 LPYNVTPP-RPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP PP R GP+ AER++ YFGIC CG + GA QACQ
Sbjct: 73 LPSLPLPPGREGGPSAAERRLEALTRELERALEARTARD-YFGICIKCGLGIYGARQACQ 131
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMG+LYHT+CFIC SCGR LRGKAFYNV +VYC+ED+LYSGFQQTA+KC++CGHLIMEM
Sbjct: 132 AMGSLYHTDCFICDSCGRRLRGKAFYNVGEKVYCQEDFLYSGFQQTADKCSVCGHLIMEM 191
Query: 395 Y-----SGFQQTAEKCAICGHLI--------MEMILQAMGKSYH----PGCFRCCLCNEC 437
+ +C++C + +E + + + YH P C C
Sbjct: 192 ILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYCV-RDYHTVFAPKCASCARPILP 250
Query: 438 LDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
G T+ V + DYH + C CG ++ EG
Sbjct: 251 AQGCETTIRV---VSMDRDYH-VECYHCEDCGMQLSGEEG 286
>ZFIN|ZDB-GENE-050419-261 [details] [associations]
symbol:wtip "Wilms tumor 1 interacting protein"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=ISS]
[GO:0014032 "neural crest cell development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0022604 "regulation of cell morphogenesis" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030054 "cell junction"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005912 "adherens junction" evidence=IEA]
[GO:0036064 "cilium basal body" evidence=IDA] [GO:0000132
"establishment of mitotic spindle orientation" evidence=IGI;IMP]
[GO:0035844 "cloaca development" evidence=IGI;IMP] [GO:0042384
"cilium assembly" evidence=IMP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-050419-261 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:JN120866 UniGene:Dr.87135 Uniprot:I6QEC4
Length = 648
Score = 606 (218.4 bits), Expect = 4.5e-59, P = 4.5e-59
Identities = 111/192 (57%), Positives = 134/192 (69%)
Query: 346 ICCSCGRALRGKA-FYNVHGRVYCEEDYLYSGFQQTAEKCA---ICGHLIME---MYSGF 398
IC CG+ + G + G +Y + + A + G + E +YSGF
Sbjct: 438 ICVKCGKGVYGASQACQAMGNLYHTNCFTCCSCGRRLRGKAFYNVNGKVYCEEDFLYSGF 497
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
QQTAEKC +CGHLIMEMILQA+G+SYHPGCFRC +C E LDGVPFTVDV+N IYCV DYH
Sbjct: 498 QQTAEKCFVCGHLIMEMILQALGRSYHPGCFRCVICKEGLDGVPFTVDVENNIYCVKDYH 557
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
+FAPKCA+C + I P +G+EET+RVVSMDKD+HVDCY CEDCGLQL DE RCYPL+G
Sbjct: 558 TVFAPKCASCNQPILPAQGSEETIRVVSMDKDYHVDCYHCEDCGLQLNDEEGHRCYPLEG 617
Query: 519 RLMCRACHLSHL 530
L+C CHL L
Sbjct: 618 HLLCHRCHLHRL 629
Score = 450 (163.5 bits), Expect = 1.7e-42, P = 1.7e-42
Identities = 108/258 (41%), Positives = 136/258 (52%)
Query: 276 LPYNVTPPRPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQA 335
LPY VTP R GP++AER++ YFGIC CG+ V GA QACQA
Sbjct: 397 LPYQVTPSRDSGPSQAERRLEALTLELEKELEIHMKKE-YFGICVKCGKGVYGASQACQA 455
Query: 336 MGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMY 395
MGNLYHTNCF CCSCGR LRGKAFYNV+G+VYCEED+LYSGFQQTAEKC +CGHLIMEM
Sbjct: 456 MGNLYHTNCFTCCSCGRRLRGKAFYNVNGKVYCEEDFLYSGFQQTAEKCFVCGHLIMEMI 515
Query: 396 -----SGFQQTAEKCAICGHLI--------MEMILQAMGKSYHPGCF--RCCLCNECLDG 440
+ +C IC + +E + + K YH F +C CN+ +
Sbjct: 516 LQALGRSYHPGCFRCVICKEGLDGVPFTVDVENNIYCV-KDYHT-VFAPKCASCNQPILP 573
Query: 441 VPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCED 500
+ + + DYH + C CG + EG R ++ H+ C+ C
Sbjct: 574 AQGSEETIRVVSMDKDYH-VDCYHCEDCGLQLNDEEGH----RCYPLEG--HLLCHRCHL 626
Query: 501 CGLQ--LTDEPDKRCYPL 516
L+ L P YPL
Sbjct: 627 HRLKTPLAPHPPPS-YPL 643
>UNIPROTKB|F1NK57 [details] [associations]
symbol:LIMD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0002076 "osteoblast
development" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005925 "focal adhesion" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] [GO:0016310 "phosphorylation"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0033962 "cytoplasmic mRNA processing body assembly"
evidence=IEA] [GO:0035195 "gene silencing by miRNA" evidence=IEA]
[GO:0035331 "negative regulation of hippo signaling cascade"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:2000637 "positive regulation of gene silencing by
miRNA" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0007010 GO:GO:0016477
GO:GO:0008360 GO:GO:0046872 GO:GO:0016310 GO:GO:0008270
GO:GO:0001666 GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0090090
GO:GO:0000932 GO:GO:0016442 GO:GO:0035195
GeneTree:ENSGT00610000085810 GO:GO:0035331 GO:GO:2000637
GO:GO:0045668 GO:GO:0033962 EMBL:AADN02001248 IPI:IPI00585788
Ensembl:ENSGALT00000019332 OMA:HIENGTT Uniprot:F1NK57
Length = 232
Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
Identities = 98/137 (71%), Positives = 118/137 (86%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQ+A++C ICGHLIM+MILQA+GKSYHPGCFRC +CNECLDGVPFTVD +NKIYC
Sbjct: 82 LYSGFQQSADRCFICGHLIMDMILQALGKSYHPGCFRCVVCNECLDGVPFTVDSENKIYC 141
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH++ APKCAACG I P EG++ET+RVVSMDKD+HV+CY CEDCG++L DE RC
Sbjct: 142 VRDYHKVLAPKCAACGLPILPSEGSDETIRVVSMDKDYHVECYHCEDCGMELNDEDGHRC 201
Query: 514 YPLQGRLMCRACHLSHL 530
YPL L+C +CHL H+
Sbjct: 202 YPLDDHLLCHSCHLKHI 218
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 79/197 (40%), Positives = 107/197 (54%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFGIC C + V GA QACQAMGNLYH CF C +C R LRGKAFY V+G+V+CEED+LY
Sbjct: 24 YFGICVKCSKGVYGANQACQAMGNLYHDGCFTCGACSRKLRGKAFYFVNGKVFCEEDFLY 83
Query: 375 SGFQQTAEKCAICGHLIMEMY-----SGFQQTAEKCAICGHLI--MEMILQAMGKSYHPG 427
SGFQQ+A++C ICGHLIM+M + +C +C + + + + K Y
Sbjct: 84 SGFQQSADRCFICGHLIMDMILQALGKSYHPGCFRCVVCNECLDGVPFTVDSENKIYCVR 143
Query: 428 CFRCCLCNECLD-GVPF--TVDVDNKIYCVN---DYHRMFAPKCAACGKGITPVEGTEET 481
+ L +C G+P + D I V+ DYH + C CG + +G
Sbjct: 144 DYHKVLAPKCAACGLPILPSEGSDETIRVVSMDKDYH-VECYHCEDCGMELNDEDGH--- 199
Query: 482 VRVVSMDKDFHVDCYMC 498
R +D H+ C+ C
Sbjct: 200 -RCYPLDD--HLLCHSC 213
>RGD|1309830 [details] [associations]
symbol:Limd1 "LIM domains containing 1" species:10116 "Rattus
norvegicus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA;ISO] [GO:0001666 "response to hypoxia"
evidence=ISO;ISS] [GO:0002076 "osteoblast development"
evidence=ISO;ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO;ISS] [GO:0005912 "adherens
junction" evidence=ISO;ISS] [GO:0005925 "focal adhesion"
evidence=ISO;ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007010 "cytoskeleton organization"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA;ISO]
[GO:0016310 "phosphorylation" evidence=ISO;ISS] [GO:0016442
"RNA-induced silencing complex" evidence=IEA;ISO] [GO:0016477 "cell
migration" evidence=IEA;ISO] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=IEA;ISO] [GO:0035195 "gene
silencing by miRNA" evidence=IEA;ISO] [GO:0035331 "negative
regulation of hippo signaling cascade" evidence=ISO;ISS]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=ISO;ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0090090
"negative regulation of canonical Wnt receptor signaling pathway"
evidence=ISO;ISS] [GO:2000637 "positive regulation of gene
silencing by miRNA" evidence=ISO;ISS] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1309830 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0007010 GO:GO:0016477 GO:GO:0008360 GO:GO:0046872
GO:GO:0016310 GO:GO:0008270 GO:GO:0001666 GO:GO:0006351
GO:GO:0005925 Gene3D:2.10.110.10 EMBL:CH473954 GO:GO:0002076
GO:GO:0090090 GO:GO:0000932 GO:GO:0016442 GO:GO:0035195
GeneTree:ENSGT00610000085810 GO:GO:0035331 GO:GO:2000637
eggNOG:NOG331290 KO:K16682 GO:GO:0045668 GO:GO:0033962 CTD:8994
OMA:SLASPKW HOGENOM:HOG000072700 HOVERGEN:HBG052327
OrthoDB:EOG42BX96 EMBL:AABR03062206 EMBL:AABR03062956 EMBL:BC168666
IPI:IPI00371306 RefSeq:NP_001106208.1 UniGene:Rn.228776
Ensembl:ENSRNOT00000006554 GeneID:316101 KEGG:rno:316101
UCSC:RGD:1309830 NextBio:670435 Genevestigator:B5DEH0
Uniprot:B5DEH0
Length = 663
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 99/147 (67%), Positives = 121/147 (82%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQ+A++C +CGHLIM+MILQA+GKSYHPGCFRC +CNECLDGVPFTVD +NKIYC
Sbjct: 513 LYSGFQQSADRCFLCGHLIMDMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYC 572
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH++ APKCAACG I P EG++ET+RVVSMD+D+HV+CY CEDCGL+L DE RC
Sbjct: 573 VRDYHKVLAPKCAACGLPILPPEGSDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRC 632
Query: 514 YPLQGRLMCRACHLSHLSRHHQSPTDL 540
YPL+ L C +CH+ L + SP L
Sbjct: 633 YPLEDHLFCHSCHVKRLEKG-PSPASL 658
Score = 354 (129.7 bits), Expect = 1.2e-31, P = 1.2e-31
Identities = 86/237 (36%), Positives = 118/237 (49%)
Query: 276 LPYNVTPPRP-MGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP P P +GP+ AE K+ YFG C C + V GAGQACQ
Sbjct: 416 LPCQTLTPGPELGPSTAELKLEALTQRLEREMDAHPKAD-YFGACVKCSKGVFGAGQACQ 474
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMG+LYH CF C +C R LRGKAFY V+G+V+CEED+LYSGFQQ+A++C +CGHLIM+M
Sbjct: 475 AMGDLYHDACFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDM 534
Query: 395 Y-----SGFQQTAEKCAICGHLI--MEMILQAMGKSYHPGCFRCCLCNECLD-GVPFTVD 446
+ +C IC + + + + K Y + L +C G+P
Sbjct: 535 ILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPP 594
Query: 447 V--DNKIYCVN---DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMC 498
D I V+ DYH + C CG + +G R ++ H+ C+ C
Sbjct: 595 EGSDETIRVVSMDRDYH-VECYHCEDCGLELNDEDGH----RCYPLED--HLFCHSC 644
>UNIPROTKB|G5E5X0 [details] [associations]
symbol:LIMD1 "LIM domain-containing protein 1" species:9913
"Bos taurus" [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005925 "focal adhesion" evidence=ISS]
[GO:0005912 "adherens junction" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0090090 "negative regulation of canonical Wnt receptor
signaling pathway" evidence=ISS] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=ISS] [GO:0002076
"osteoblast development" evidence=ISS] [GO:2000637 "positive
regulation of gene silencing by miRNA" evidence=ISS] [GO:0001666
"response to hypoxia" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0035331 "negative regulation of hippo signaling cascade"
evidence=ISS] [GO:0016310 "phosphorylation" evidence=ISS]
[GO:0000932 "cytoplasmic mRNA processing body" evidence=IEA]
[GO:0035195 "gene silencing by miRNA" evidence=IEA] [GO:0033962
"cytoplasmic mRNA processing body assembly" evidence=IEA]
[GO:0016477 "cell migration" evidence=IEA] [GO:0016442 "RNA-induced
silencing complex" evidence=IEA] [GO:0008360 "regulation of cell
shape" evidence=IEA] [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0007010 GO:GO:0016477 GO:GO:0008360
GO:GO:0046872 GO:GO:0016310 GO:GO:0008270 GO:GO:0001666
GO:GO:0006351 GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0002076
GO:GO:0090090 GO:GO:0000932 GO:GO:0016442 GO:GO:0035195
GeneTree:ENSGT00610000085810 GO:GO:0035331 GO:GO:2000637
GO:GO:0045668 GO:GO:0033962 EMBL:DAAA02054514 EMBL:DAAA02054515
EMBL:DAAA02054516 EMBL:DAAA02054517 EMBL:DAAA02054518
RefSeq:NP_001180092.1 UniGene:Bt.43695 PRIDE:G5E5X0
Ensembl:ENSBTAT00000037007 GeneID:617525 KEGG:bta:617525 CTD:8994
OMA:SLASPKW NextBio:20900712 Uniprot:G5E5X0
Length = 674
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 99/148 (66%), Positives = 122/148 (82%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQ+A++C +CGHLIM+MILQA+GKSYHPGCFRC +CNECLDGVPFTVD +NKIYC
Sbjct: 524 LYSGFQQSADRCFLCGHLIMDMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYC 583
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH++ APKCAACG I P EG++ET+RVVSMD+D+HV+CY CEDCGL+L DE RC
Sbjct: 584 VRDYHKVLAPKCAACGLPILPPEGSDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRC 643
Query: 514 YPLQGRLMCRACHLSHLSRHHQSPTDLQ 541
YPL+ L C +CH+ L + SP L+
Sbjct: 644 YPLEDHLFCHSCHVKRLEKG-PSPAALR 670
Score = 361 (132.1 bits), Expect = 2.3e-32, P = 2.3e-32
Identities = 88/237 (37%), Positives = 118/237 (49%)
Query: 276 LPYNVTPPRP-MGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP P P +GPT AE K+ YFG C C + V GAGQACQ
Sbjct: 427 LPCQTLIPGPELGPTAAELKLEALTQRLEREMDAHPKAD-YFGACVKCSKGVFGAGQACQ 485
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMGNLYH CF C +C R LRGKAFY V+G+V+CEED+LYSGFQQ+A++C +CGHLIM+M
Sbjct: 486 AMGNLYHDACFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDM 545
Query: 395 Y-----SGFQQTAEKCAICGHLI--MEMILQAMGKSYHPGCFRCCLCNECLD-GVPFTVD 446
+ +C IC + + + + K Y + L +C G+P
Sbjct: 546 ILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPP 605
Query: 447 V--DNKIYCVN---DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMC 498
D I V+ DYH + C CG + +G R ++ H+ C+ C
Sbjct: 606 EGSDETIRVVSMDRDYH-VECYHCEDCGLELNDEDGH----RCYPLED--HLFCHSC 655
>MGI|MGI:1352502 [details] [associations]
symbol:Limd1 "LIM domains containing 1" species:10090 "Mus
musculus" [GO:0000932 "cytoplasmic mRNA processing body"
evidence=ISO] [GO:0001666 "response to hypoxia" evidence=ISO]
[GO:0002076 "osteoblast development" evidence=IMP] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005912 "adherens
junction" evidence=ISO] [GO:0005925 "focal adhesion" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008360
"regulation of cell shape" evidence=ISO] [GO:0016310
"phosphorylation" evidence=ISO] [GO:0016442 "RNA-induced silencing
complex" evidence=ISO] [GO:0016477 "cell migration" evidence=ISO]
[GO:0030054 "cell junction" evidence=IEA] [GO:0031047 "gene
silencing by RNA" evidence=IEA] [GO:0033962 "cytoplasmic mRNA
processing body assembly" evidence=ISO] [GO:0035195 "gene silencing
by miRNA" evidence=ISO] [GO:0035331 "negative regulation of hippo
signaling cascade" evidence=ISO] [GO:0045668 "negative regulation
of osteoblast differentiation" evidence=IMP] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=IMP] [GO:2000637 "positive regulation of gene silencing by
miRNA" evidence=ISO] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:1352502
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0007010 GO:GO:0016477 GO:GO:0008360 GO:GO:0046872
GO:GO:0016310 GO:GO:0008270 GO:GO:0001666 GO:GO:0006351
GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0002076 GO:GO:0090090
GO:GO:0000932 GO:GO:0016442 GO:GO:0035195
GeneTree:ENSGT00610000085810 GO:GO:0035331 GO:GO:2000637
eggNOG:NOG331290 KO:K16682 GO:GO:0045668 GO:GO:0033962 CTD:8994
OMA:SLASPKW HOGENOM:HOG000072700 HOVERGEN:HBG052327 EMBL:AJ132409
EMBL:AK004806 EMBL:AK047198 EMBL:BC056449 IPI:IPI00134881
RefSeq:NP_038888.2 UniGene:Mm.10987 ProteinModelPortal:Q9QXD8
SMR:Q9QXD8 DIP:DIP-38453N IntAct:Q9QXD8 STRING:Q9QXD8
PhosphoSite:Q9QXD8 PaxDb:Q9QXD8 PRIDE:Q9QXD8
Ensembl:ENSMUST00000026269 GeneID:29806 KEGG:mmu:29806
UCSC:uc009sge.2 InParanoid:Q9QXD8 OrthoDB:EOG42BX96 NextBio:306940
Bgee:Q9QXD8 CleanEx:MM_LIMD1 Genevestigator:Q9QXD8
GermOnline:ENSMUSG00000025239 Uniprot:Q9QXD8
Length = 668
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 99/147 (67%), Positives = 121/147 (82%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQ+A++C +CGHLIM+MILQA+GKSYHPGCFRC +CNECLDGVPFTVD +NKIYC
Sbjct: 518 LYSGFQQSADRCFLCGHLIMDMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYC 577
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH++ APKCAACG I P EG++ET+RVVSMD+D+HV+CY CEDCGL+L DE RC
Sbjct: 578 VRDYHKVLAPKCAACGLPILPPEGSDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRC 637
Query: 514 YPLQGRLMCRACHLSHLSRHHQSPTDL 540
YPL+ L C +CH+ L + SP L
Sbjct: 638 YPLEDHLFCHSCHVKRLEKG-PSPAPL 663
Score = 353 (129.3 bits), Expect = 1.6e-31, P = 1.6e-31
Identities = 86/237 (36%), Positives = 118/237 (49%)
Query: 276 LPYNVTPPRP-MGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP P P +GP+ AE K+ YFG C C + V GAGQACQ
Sbjct: 421 LPCQTLAPGPELGPSTAELKLEALTQRLEREMDAHPKAD-YFGSCVKCSKGVFGAGQACQ 479
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMG+LYH CF C +C R LRGKAFY V+G+V+CEED+LYSGFQQ+A++C +CGHLIM+M
Sbjct: 480 AMGDLYHDACFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDM 539
Query: 395 Y-----SGFQQTAEKCAICGHLI--MEMILQAMGKSYHPGCFRCCLCNECLD-GVPFTVD 446
+ +C IC + + + + K Y + L +C G+P
Sbjct: 540 ILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPP 599
Query: 447 V--DNKIYCVN---DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMC 498
D I V+ DYH + C CG + +G R ++ H+ C+ C
Sbjct: 600 EGSDETIRVVSMDRDYH-VECYHCEDCGLELNDEDGH----RCYPLED--HLFCHSC 649
>UNIPROTKB|Q9UGP4 [details] [associations]
symbol:LIMD1 "LIM domain-containing protein 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0007010 "cytoskeleton organization" evidence=IMP]
[GO:0016477 "cell migration" evidence=IMP] [GO:0008360 "regulation
of cell shape" evidence=IMP] [GO:2000637 "positive regulation of
gene silencing by miRNA" evidence=IMP] [GO:0005912 "adherens
junction" evidence=IDA] [GO:0016310 "phosphorylation" evidence=IDA]
[GO:0005925 "focal adhesion" evidence=IDA] [GO:0035331 "negative
regulation of hippo signaling cascade" evidence=IDA] [GO:0001666
"response to hypoxia" evidence=IDA] [GO:0002076 "osteoblast
development" evidence=ISS] [GO:0045668 "negative regulation of
osteoblast differentiation" evidence=ISS] [GO:0090090 "negative
regulation of canonical Wnt receptor signaling pathway"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IDA] [GO:0016442 "RNA-induced silencing complex"
evidence=IDA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IMP] [GO:0035195 "gene silencing by miRNA"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=TAS] [GO:0007165 "signal transduction"
evidence=TAS] [GO:0007275 "multicellular organismal development"
evidence=TAS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007275 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0007165 GO:GO:0007010
GO:GO:0016477 GO:GO:0008360 GO:GO:0046872 GO:GO:0016310
GO:GO:0008270 GO:GO:0001666 GO:GO:0006351 GO:GO:0005925
Gene3D:2.10.110.10 GO:GO:0002076 GO:GO:0090090 GO:GO:0000932
GO:GO:0016442 GO:GO:0035195 GO:GO:0035331 GO:GO:2000637
eggNOG:NOG331290 GO:GO:0045668 GO:GO:0033962 CTD:8994 OMA:SLASPKW
EMBL:AJ132408 EMBL:AJ312686 EMBL:AJ297357 EMBL:BC117236
EMBL:BC117238 IPI:IPI00003369 RefSeq:NP_055055.1 UniGene:Hs.193370
UniGene:Hs.621057 ProteinModelPortal:Q9UGP4 SMR:Q9UGP4
IntAct:Q9UGP4 MINT:MINT-1193166 STRING:Q9UGP4 PhosphoSite:Q9UGP4
DMDM:47605932 PaxDb:Q9UGP4 PRIDE:Q9UGP4 Ensembl:ENST00000273317
GeneID:8994 KEGG:hsa:8994 UCSC:uc003coq.3 GeneCards:GC03P045611
HGNC:HGNC:6612 MIM:604543 neXtProt:NX_Q9UGP4 PharmGKB:PA30385
HOGENOM:HOG000072700 HOVERGEN:HBG052327 InParanoid:Q9UGP4
PhylomeDB:Q9UGP4 ChiTaRS:LIMD1 GenomeRNAi:8994 NextBio:33727
ArrayExpress:Q9UGP4 Bgee:Q9UGP4 CleanEx:HS_LIMD1
Genevestigator:Q9UGP4 GermOnline:ENSG00000144791 Uniprot:Q9UGP4
Length = 676
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 97/143 (67%), Positives = 119/143 (83%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQ+A++C +CGHLIM+MILQA+GKSYHPGCFRC +CNECLDGVPFTVD +NKIYC
Sbjct: 526 LYSGFQQSADRCFLCGHLIMDMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYC 585
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH++ APKCAACG I P EG++ET+RVVSMD+D+HV+CY CEDCGL+L DE RC
Sbjct: 586 VRDYHKVLAPKCAACGLPILPPEGSDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRC 645
Query: 514 YPLQGRLMCRACHLSHLSRHHQS 536
YPL+ L C +CH+ L + S
Sbjct: 646 YPLEDHLFCHSCHVKRLEKRPSS 668
Score = 350 (128.3 bits), Expect = 3.6e-31, P = 3.6e-31
Identities = 86/237 (36%), Positives = 117/237 (49%)
Query: 276 LPYNVTPPRP-MGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP P P + P+ AE K+ YFG C C + V GAGQACQ
Sbjct: 429 LPCQPLVPGPELRPSAAELKLEALTQRLEREMDAHPKAD-YFGACVKCSKGVFGAGQACQ 487
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMGNLYH CF C +C R LRGKAFY V+G+V+CEED+LYSGFQQ+A++C +CGHLIM+M
Sbjct: 488 AMGNLYHDTCFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDM 547
Query: 395 Y-----SGFQQTAEKCAICGHLI--MEMILQAMGKSYHPGCFRCCLCNECLD-GVPFTVD 446
+ +C IC + + + + K Y + L +C G+P
Sbjct: 548 ILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPP 607
Query: 447 V--DNKIYCVN---DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMC 498
D I V+ DYH + C CG + +G R ++ H+ C+ C
Sbjct: 608 EGSDETIRVVSMDRDYH-VECYHCEDCGLELNDEDGH----RCYPLED--HLFCHSC 657
>UNIPROTKB|B7ZUL2 [details] [associations]
symbol:limd1 "LIM domain-containing protein 1" species:8364
"Xenopus (Silurana) tropicalis" [GO:0003714 "transcription
corepressor activity" evidence=ISS] [GO:0014032 "neural crest cell
development" evidence=ISS] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0005737 GO:GO:0003714 GO:GO:0006355 GO:GO:0046872
GO:GO:0008270 GO:GO:0006351 Gene3D:2.10.110.10 GO:GO:0014032
CTD:8994 HOVERGEN:HBG082409 EMBL:CR760537 EMBL:BC171270
RefSeq:NP_001016606.1 UniGene:Str.27016 GeneID:549360
KEGG:xtr:549360 Xenbase:XB-GENE-1017238 Uniprot:B7ZUL2
Length = 593
Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
Identities = 96/143 (67%), Positives = 118/143 (82%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGF Q+A++C +CGH IM+MILQA+GKS+HPGCFRC +CNECLDGVPFTVD++NKIYC
Sbjct: 451 LYSGFHQSADRCFVCGHWIMDMILQALGKSFHPGCFRCAVCNECLDGVPFTVDMENKIYC 510
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH++ APKCAAC I P EGT+ET+RVVSMDKD+H+DCY CE C L+L +E D RC
Sbjct: 511 VKDYHKILAPKCAACSLPILPSEGTDETIRVVSMDKDYHIDCYRCESCALELNNEDDHRC 570
Query: 514 YPLQGRLMCRACHLSHLSRHHQS 536
YPL+G L C CHL +L H+ S
Sbjct: 571 YPLEGHLFCHNCHLKYLENHNLS 593
Score = 350 (128.3 bits), Expect = 2.1e-31, P = 2.1e-31
Identities = 84/229 (36%), Positives = 114/229 (49%)
Query: 287 GPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQAMGNLYHTNCFI 346
G + AE+K+ YFG C C + V GA QACQAMGNLYH CFI
Sbjct: 366 GSSRAEKKLEAITRHLEQEMDAHTRAD-YFGTCVKCSKGVYGANQACQAMGNLYHNGCFI 424
Query: 347 CCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMY-----SGFQQT 401
C +C R LRGKAFY V+G+VYCEED+LYSGF Q+A++C +CGH IM+M F
Sbjct: 425 CSACSRKLRGKAFYFVNGKVYCEEDFLYSGFHQSADRCFVCGHWIMDMILQALGKSFHPG 484
Query: 402 AEKCAICGHLI--------MEMILQAMGKSYH----PGCFRCCLCNECLDGVPFTVDVDN 449
+CA+C + ME + + K YH P C C L +G T+ V
Sbjct: 485 CFRCAVCNECLDGVPFTVDMENKIYCV-KDYHKILAPKCAACSLPILPSEGTDETIRV-- 541
Query: 450 KIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMC 498
+ DYH + +C +C + E+ R ++ H+ C+ C
Sbjct: 542 -VSMDKDYH-IDCYRCESCALELN----NEDDHRCYPLEG--HLFCHNC 582
>UNIPROTKB|E2RQV5 [details] [associations]
symbol:LIMD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000637 "positive regulation of gene
silencing by miRNA" evidence=IEA] [GO:0090090 "negative regulation
of canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045668 "negative regulation of osteoblast
differentiation" evidence=IEA] [GO:0035331 "negative regulation of
hippo signaling cascade" evidence=IEA] [GO:0035195 "gene silencing
by miRNA" evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing
body assembly" evidence=IEA] [GO:0016477 "cell migration"
evidence=IEA] [GO:0016442 "RNA-induced silencing complex"
evidence=IEA] [GO:0016310 "phosphorylation" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0002076 "osteoblast development" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0007010 GO:GO:0016477 GO:GO:0008360
GO:GO:0046872 GO:GO:0016310 GO:GO:0008270 GO:GO:0001666
GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0002076 GO:GO:0090090
GO:GO:0000932 GO:GO:0016442 GO:GO:0035195
GeneTree:ENSGT00610000085810 GO:GO:0035331 GO:GO:2000637 KO:K16682
GO:GO:0045668 GO:GO:0033962 OMA:SLASPKW EMBL:AAEX03012253
RefSeq:XP_003639802.1 Ensembl:ENSCAFT00000022238 GeneID:100856566
KEGG:cfa:100856566 Uniprot:E2RQV5
Length = 655
Score = 595 (214.5 bits), Expect = 6.6e-58, P = 6.6e-58
Identities = 97/143 (67%), Positives = 119/143 (83%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQ+A++C +CGHLIM+MILQA+GKSYHPGCFRC +CNECLDGVPFTVD +NKIYC
Sbjct: 505 LYSGFQQSADRCFLCGHLIMDMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYC 564
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH++ APKCAACG I P EG++ET+RVVSMD+D+HV+CY CEDCGL+L DE RC
Sbjct: 565 VRDYHKVLAPKCAACGLPILPPEGSDETIRVVSMDRDYHVECYHCEDCGLELNDEDGHRC 624
Query: 514 YPLQGRLMCRACHLSHLSRHHQS 536
YPL+ L C +CH+ L + S
Sbjct: 625 YPLEDHLFCHSCHVKRLEKSPSS 647
Score = 357 (130.7 bits), Expect = 5.6e-32, P = 5.6e-32
Identities = 87/237 (36%), Positives = 118/237 (49%)
Query: 276 LPYNVTPPRP-MGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP P P +GP+ AE K+ YFG C C + V GAGQACQ
Sbjct: 408 LPCQTLIPGPELGPSAAELKLEALTQRLEREMDAHPKAD-YFGACVKCSKGVFGAGQACQ 466
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMGNLYH CF C +C R LRGKAFY V+G+V+CEED+LYSGFQQ+A++C +CGHLIM+M
Sbjct: 467 AMGNLYHDACFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDM 526
Query: 395 Y-----SGFQQTAEKCAICGHLI--MEMILQAMGKSYHPGCFRCCLCNECLD-GVPFTVD 446
+ +C IC + + + + K Y + L +C G+P
Sbjct: 527 ILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLPILPP 586
Query: 447 V--DNKIYCVN---DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMC 498
D I V+ DYH + C CG + +G R ++ H+ C+ C
Sbjct: 587 EGSDETIRVVSMDRDYH-VECYHCEDCGLELNDEDGH----RCYPLED--HLFCHSC 636
>RGD|620407 [details] [associations]
symbol:Ajuba "ajuba LIM protein" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA;ISO] [GO:0000932
"cytoplasmic mRNA processing body" evidence=ISO;ISS] [GO:0001666
"response to hypoxia" evidence=IEA;ISO] [GO:0003682 "chromatin
binding" evidence=IEA;ISO] [GO:0003714 "transcription corepressor
activity" evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005667 "transcription factor complex" evidence=IEA;ISO]
[GO:0005815 "microtubule organizing center" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005911 "cell-cell junction"
evidence=ISO;IDA] [GO:0005925 "focal adhesion" evidence=IEA;ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016339 "calcium-dependent cell-cell
adhesion" evidence=IEA;ISO] [GO:0030027 "lamellipodium"
evidence=IEA;ISO] [GO:0030032 "lamellipodium assembly"
evidence=IEA;ISO] [GO:0030334 "regulation of cell migration"
evidence=IEA;ISO] [GO:0031328 "positive regulation of cellular
biosynthetic process" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0033673 "negative regulation of kinase activity"
evidence=IEA;ISO] [GO:0033674 "positive regulation of kinase
activity" evidence=ISO] [GO:0034613 "cellular protein localization"
evidence=IEA;ISO] [GO:0035195 "gene silencing by miRNA"
evidence=IEA;ISO] [GO:0035313 "wound healing, spreading of
epidermal cells" evidence=IEA;ISO] [GO:0035331 "negative regulation
of hippo signaling cascade" evidence=ISO;ISS] [GO:0043087
"regulation of GTPase activity" evidence=IEA;ISO] [GO:0043123
"positive regulation of I-kappaB kinase/NF-kappaB cascade"
evidence=IEA;ISO] [GO:0043406 "positive regulation of MAP kinase
activity" evidence=IEA;ISO] [GO:0045294 "alpha-catenin binding"
evidence=IEA;ISO] [GO:0046474 "glycerophospholipid biosynthetic
process" evidence=IEA;ISO] [GO:0048041 "focal adhesion assembly"
evidence=IEA;ISO] [GO:0051015 "actin filament binding"
evidence=IEA;ISO] [GO:1900037 "regulation of cellular response to
hypoxia" evidence=IEA;ISO] [GO:2000637 "positive regulation of gene
silencing by miRNA" evidence=ISO;ISS] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:620407 GO:GO:0005829 GO:GO:0005886 GO:GO:0003714 GO:GO:0031334
GO:GO:0034613 GO:GO:0046872 GO:GO:0043406 GO:GO:0043123
GO:GO:0008270 GO:GO:0001666 GO:GO:0006351 GO:GO:0003682
GO:GO:0005911 GO:GO:0005925 GO:GO:0030027 GO:GO:0005815
GO:GO:0005667 GO:GO:0000122 GO:GO:0030334 GO:GO:0007049
Gene3D:2.10.110.10 GO:GO:0048041 GO:GO:0035313 GO:GO:0000932
GO:GO:0035195 CTD:84962 GeneTree:ENSGT00610000085810 OMA:YEGSFPG
GO:GO:0016339 GO:GO:0046474 GO:GO:0030032 GO:GO:0035331
GO:GO:0033673 GO:GO:0031328 GO:GO:2000637 GO:GO:1900037
GO:GO:0043087 eggNOG:NOG331290 HSSP:Q05158 HOGENOM:HOG000113139
HOVERGEN:HBG095660 OrthoDB:EOG4GMTX9 EMBL:BC085802 EMBL:AJ306292
IPI:IPI00195741 RefSeq:NP_445955.1 UniGene:Rn.144617
ProteinModelPortal:Q5U2Z2 PhosphoSite:Q5U2Z2 PRIDE:Q5U2Z2
Ensembl:ENSRNOT00000017753 GeneID:85265 KEGG:rno:85265
UCSC:RGD:620407 InParanoid:Q5U2Z2 NextBio:617404
Genevestigator:Q5U2Z2 Uniprot:Q5U2Z2
Length = 548
Score = 567 (204.7 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 93/146 (63%), Positives = 116/146 (79%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
++SGFQ+ AEKC +CGHLI+E ILQAMGKSYHPGCFRC +CN+CLDGVPFTVD N++YC
Sbjct: 402 LFSGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGVPFTVDFSNQVYC 461
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH+ +APKCAACG+ I P EG E+ VRV+SMD+D+H +CY CEDC +QL+DE C
Sbjct: 462 VTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCC 521
Query: 514 YPLQGRLMCRACHLSHLSRHHQSPTD 539
+PL G L+C CH+ LS Q PT+
Sbjct: 522 FPLDGHLLCHGCHMQRLSAR-QPPTN 546
Score = 329 (120.9 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 68/176 (38%), Positives = 92/176 (52%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C C + + G ACQA+ +LYHT CF+CCSCGR LR KAFY+V+G VYCEEDYL+
Sbjct: 344 YFGTCIKCNKGIYGQSNACQALDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDYLF 403
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLI--MEMILQAMGK----- 422
SGFQ+ AEKC +CGHLI+E M + +C +C + + + +
Sbjct: 404 SGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGVPFTVDFSNQVYCVT 463
Query: 423 SYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
YH +C C + + D+ I DYH C C ++ EG
Sbjct: 464 DYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYH-FECYHCEDCRMQLSDEEG 518
Score = 38 (18.4 bits), Expect = 4.2e-57, Sum P(2) = 4.2e-57
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 282 PPRPMGPTEAER 293
P R GP +AER
Sbjct: 73 PAREQGPLDAER 84
>UNIPROTKB|Q06BR1 [details] [associations]
symbol:limd1 "LIM domain-containing protein 1" species:8355
"Xenopus laevis" [GO:0003714 "transcription corepressor activity"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0014032 "neural crest cell development" evidence=IMP]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0005737 GO:GO:0003714
GO:GO:0006355 GO:GO:0046872 GO:GO:0008270 GO:GO:0006351
Gene3D:2.10.110.10 GO:GO:0014032 CTD:8994 EMBL:DQ913740
RefSeq:NP_001090194.1 UniGene:Xl.59946 ProteinModelPortal:Q06BR1
GeneID:779085 KEGG:xla:779085 Xenbase:XB-GENE-1017241
HOVERGEN:HBG082409 Uniprot:Q06BR1
Length = 612
Score = 587 (211.7 bits), Expect = 4.6e-57, P = 4.6e-57
Identities = 104/197 (52%), Positives = 134/197 (68%)
Query: 347 CCSCGRALRGKA-FYNVHGRVYCEEDYLYSGFQQTAEKCA---ICGHLIME---MYSGFQ 399
C C + + G + G +Y ++ S + A + G + E +YSGF
Sbjct: 416 CVKCSKGVYGASQACQAMGNLYHNGCFICSACSRKLRGKAFYFVNGKVYCEEDFLYSGFH 475
Query: 400 QTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
Q+A++C +CGH IM+MILQA+GKS+HPGCFRC +CNECLDGVPFTVD++NKIYCV DYH+
Sbjct: 476 QSADRCFVCGHWIMDMILQALGKSFHPGCFRCVVCNECLDGVPFTVDMENKIYCVKDYHK 535
Query: 460 MFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR 519
+ APKCA C I P EGT+ET+RVVSMDKD+H+DCY CE C L+L +E D RCYPL G
Sbjct: 536 ILAPKCAVCSLPILPSEGTDETIRVVSMDKDYHIDCYRCECCALELNNEDDHRCYPLDGH 595
Query: 520 LMCRACHLSHLSRHHQS 536
L C CHL +L H+ S
Sbjct: 596 LFCHNCHLKYLENHNLS 612
Score = 347 (127.2 bits), Expect = 5.3e-31, P = 5.3e-31
Identities = 84/229 (36%), Positives = 113/229 (49%)
Query: 287 GPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQAMGNLYHTNCFI 346
G ++AE+K+ YFG C C + V GA QACQAMGNLYH CFI
Sbjct: 385 GSSKAEKKLEAITRHVEQEMDAHNKAD-YFGTCVKCSKGVYGASQACQAMGNLYHNGCFI 443
Query: 347 CCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMY-----SGFQQT 401
C +C R LRGKAFY V+G+VYCEED+LYSGF Q+A++C +CGH IM+M F
Sbjct: 444 CSACSRKLRGKAFYFVNGKVYCEEDFLYSGFHQSADRCFVCGHWIMDMILQALGKSFHPG 503
Query: 402 AEKCAICGHLI--------MEMILQAMGKSYH----PGCFRCCLCNECLDGVPFTVDVDN 449
+C +C + ME + + K YH P C C L +G T+ V
Sbjct: 504 CFRCVVCNECLDGVPFTVDMENKIYCV-KDYHKILAPKCAVCSLPILPSEGTDETIRV-- 560
Query: 450 KIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMC 498
+ DYH + +C C + E+ R +D H+ C+ C
Sbjct: 561 -VSMDKDYH-IDCYRCECCALELN----NEDDHRCYPLDG--HLFCHNC 601
>UNIPROTKB|E1BKA3 [details] [associations]
symbol:AJUBA "LIM domain-containing protein ajuba"
species:9913 "Bos taurus" [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0035331 "negative regulation of hippo
signaling cascade" evidence=ISS] [GO:0000932 "cytoplasmic mRNA
processing body" evidence=ISS] [GO:2000637 "positive regulation of
gene silencing by miRNA" evidence=ISS] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0005815 "microtubule organizing center"
evidence=IEA] [GO:1900037 "regulation of cellular response to
hypoxia" evidence=IEA] [GO:0051015 "actin filament binding"
evidence=IEA] [GO:0048041 "focal adhesion assembly" evidence=IEA]
[GO:0046474 "glycerophospholipid biosynthetic process"
evidence=IEA] [GO:0045294 "alpha-catenin binding" evidence=IEA]
[GO:0043406 "positive regulation of MAP kinase activity"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043087 "regulation of
GTPase activity" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0035195 "gene
silencing by miRNA" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0033673 "negative regulation of
kinase activity" evidence=IEA] [GO:0031334 "positive regulation of
protein complex assembly" evidence=IEA] [GO:0031328 "positive
regulation of cellular biosynthetic process" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030032 "lamellipodium assembly" evidence=IEA] [GO:0030027
"lamellipodium" evidence=IEA] [GO:0016339 "calcium-dependent
cell-cell adhesion" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS50023 SMART:SM00132 GO:GO:0005829 GO:GO:0005886
GO:GO:0003714 GO:GO:0031334 GO:GO:0034613 GO:GO:0046872
GO:GO:0043406 GO:GO:0043123 GO:GO:0008270 GO:GO:0001666
GO:GO:0006351 GO:GO:0003682 GO:GO:0005925 GO:GO:0030027
GO:GO:0005815 GO:GO:0005667 GO:GO:0000122 GO:GO:0030334
Gene3D:2.10.110.10 GO:GO:0048041 GO:GO:0035313 GO:GO:0000932
GO:GO:0035195 EMBL:DAAA02028044 EMBL:DAAA02028045 IPI:IPI00712757
RefSeq:NP_001179446.1 UniGene:Bt.24148 Ensembl:ENSBTAT00000016915
GeneID:519937 KEGG:bta:519937 CTD:84962
GeneTree:ENSGT00610000085810 OMA:YEGSFPG NextBio:20872985
GO:GO:0016339 GO:GO:0046474 GO:GO:0030032 GO:GO:0035331
GO:GO:0033673 GO:GO:0031328 GO:GO:2000637 GO:GO:1900037
GO:GO:0043087 Uniprot:E1BKA3
Length = 548
Score = 562 (202.9 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 91/146 (62%), Positives = 115/146 (78%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
++SGFQ+ AEKC +CGHLI+E ILQAMGKSYHPGCFRC +CN+CLDG+PFTVD N++YC
Sbjct: 402 LFSGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYC 461
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH+ +APKCAACG+ I P EG E+ VRV+SMD+D+H +CY CEDC +QL+DE C
Sbjct: 462 VTDYHKSYAPKCAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCC 521
Query: 514 YPLQGRLMCRACHLSHLSRHHQSPTD 539
+PL G L+C CH+ LS Q P +
Sbjct: 522 FPLDGHLLCHGCHMQRLSAR-QPPAN 546
Score = 330 (121.2 bits), Expect = 6.1e-29, Sum P(2) = 6.1e-29
Identities = 71/179 (39%), Positives = 94/179 (52%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C C + + G ACQA+ +LYHT CF+CCSCGR LR KAFY+V+G VYCEEDYL+
Sbjct: 344 YFGTCIKCNKGIYGQSNACQALDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDYLF 403
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLI------MEMILQAM--- 420
SGFQ+ AEKC +CGHLI+E M + +C +C + ++ Q
Sbjct: 404 SGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVT 463
Query: 421 --GKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
KSY P +C C + + D+ I DYH C C ++ EG
Sbjct: 464 DYHKSYAP---KCAACGQPILPSEGCEDIVRVISMDRDYH-FECYHCEDCRMQLSDEEG 518
Score = 40 (19.1 bits), Expect = 8.8e-57, Sum P(2) = 8.8e-57
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 11 LDAKCKPVGAIESFLVEGTSRAPAPPP 37
LDA+ P G+ E EG S PPP
Sbjct: 80 LDAERNPRGSFEVPRYEG-SFPGGPPP 105
Score = 38 (18.4 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 282 PPRPMGPTEAER 293
P R GP +AER
Sbjct: 73 PAREQGPLDAER 84
>MGI|MGI:1341886 [details] [associations]
symbol:Ajuba "ajuba LIM protein" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IMP] [GO:0000932 "cytoplasmic
mRNA processing body" evidence=ISO] [GO:0001666 "response to
hypoxia" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0003714 "transcription corepressor activity"
evidence=ISO;IMP;IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0005925 "focal
adhesion" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016339 "calcium-dependent cell-cell adhesion" evidence=IMP]
[GO:0030027 "lamellipodium" evidence=IDA] [GO:0030032
"lamellipodium assembly" evidence=IMP] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030334 "regulation of cell migration"
evidence=IMP;IDA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0031328 "positive regulation of cellular biosynthetic process"
evidence=IMP] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0033673 "negative regulation of kinase
activity" evidence=IDA] [GO:0033674 "positive regulation of kinase
activity" evidence=IDA] [GO:0034613 "cellular protein localization"
evidence=IMP] [GO:0035195 "gene silencing by miRNA" evidence=ISO]
[GO:0035313 "wound healing, spreading of epidermal cells"
evidence=IMP] [GO:0035331 "negative regulation of hippo signaling
cascade" evidence=ISO] [GO:0043087 "regulation of GTPase activity"
evidence=IMP] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IMP] [GO:0043406 "positive
regulation of MAP kinase activity" evidence=IDA] [GO:0045294
"alpha-catenin binding" evidence=ISO;IDA] [GO:0046474
"glycerophospholipid biosynthetic process" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048041 "focal
adhesion assembly" evidence=IMP] [GO:0051015 "actin filament
binding" evidence=IDA] [GO:1900037 "regulation of cellular response
to hypoxia" evidence=ISO] [GO:2000637 "positive regulation of gene
silencing by miRNA" evidence=ISO] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:1341886
GO:GO:0005829 GO:GO:0005886 GO:GO:0003714 GO:GO:0031334
GO:GO:0034613 GO:GO:0046872 GO:GO:0043406 GO:GO:0043123
GO:GO:0008270 GO:GO:0001666 GO:GO:0051015 GO:GO:0006351
GO:GO:0003682 GO:GO:0005911 GO:GO:0005925 GO:GO:0030027
GO:GO:0005815 GO:GO:0005667 GO:GO:0000122 GO:GO:0030334
GO:GO:0007049 Gene3D:2.10.110.10 GO:GO:0048041 GO:GO:0035313
GO:GO:0000932 GO:GO:0035195 GeneTree:ENSGT00610000085810
OMA:YEGSFPG GO:GO:0016339 GO:GO:0046474 GO:GO:0030032 GO:GO:0035331
GO:GO:0033673 GO:GO:0031328 GO:GO:2000637 GO:GO:1900037
GO:GO:0043087 CTD:16475 eggNOG:NOG331290 HSSP:Q05158
HOGENOM:HOG000113139 HOVERGEN:HBG095660 OrthoDB:EOG4GMTX9
GO:GO:0045294 EMBL:U79776 EMBL:BC011035 IPI:IPI00453693
RefSeq:NP_034720.2 UniGene:Mm.100253 ProteinModelPortal:Q91XC0
SMR:Q91XC0 DIP:DIP-38451N IntAct:Q91XC0 STRING:Q91XC0
PhosphoSite:Q91XC0 PRIDE:Q91XC0 Ensembl:ENSMUST00000054487
GeneID:16475 KEGG:mmu:16475 UCSC:uc007twj.1 InParanoid:Q91XC0
NextBio:289759 Bgee:Q91XC0 CleanEx:MM_JUB Genevestigator:Q91XC0
Uniprot:Q91XC0
Length = 547
Score = 562 (202.9 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 91/143 (63%), Positives = 113/143 (79%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
++SGFQ+ AEKC +CGHLI+E ILQAMGKSYHPGCFRC +CN+CLDGVPFTVD N++YC
Sbjct: 401 LFSGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGVPFTVDFSNQVYC 460
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH+ +APKCAACG+ I P EG E+ VRV+SMD+D+H +CY CEDC +QL+DE C
Sbjct: 461 VTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCC 520
Query: 514 YPLQGRLMCRACHLSHLSRHHQS 536
+PL G L+C CH+ LS S
Sbjct: 521 FPLDGHLLCHGCHMQRLSARQPS 543
Score = 329 (120.9 bits), Expect = 1.6e-28, Sum P(2) = 1.6e-28
Identities = 68/176 (38%), Positives = 92/176 (52%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C C + + G ACQA+ +LYHT CF+CCSCGR LR KAFY+V+G VYCEEDYL+
Sbjct: 343 YFGTCIKCNKGIYGQSNACQALDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDYLF 402
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLI--MEMILQAMGK----- 422
SGFQ+ AEKC +CGHLI+E M + +C +C + + + +
Sbjct: 403 SGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGVPFTVDFSNQVYCVT 462
Query: 423 SYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
YH +C C + + D+ I DYH C C ++ EG
Sbjct: 463 DYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYH-FECYHCEDCRMQLSDEEG 517
Score = 38 (18.4 bits), Expect = 1.4e-56, Sum P(2) = 1.4e-56
Identities = 7/12 (58%), Positives = 8/12 (66%)
Query: 282 PPRPMGPTEAER 293
P R GP +AER
Sbjct: 73 PAREQGPLDAER 84
>UNIPROTKB|Q96IF1 [details] [associations]
symbol:AJUBA "LIM domain-containing protein ajuba"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0016339 "calcium-dependent
cell-cell adhesion" evidence=IEA] [GO:0030027 "lamellipodium"
evidence=IEA] [GO:0030032 "lamellipodium assembly" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0031328 "positive regulation of cellular biosynthetic process"
evidence=IEA] [GO:0033673 "negative regulation of kinase activity"
evidence=IEA] [GO:0034613 "cellular protein localization"
evidence=IEA] [GO:0035313 "wound healing, spreading of epidermal
cells" evidence=IEA] [GO:0043087 "regulation of GTPase activity"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043406 "positive
regulation of MAP kinase activity" evidence=IEA] [GO:0046474
"glycerophospholipid biosynthetic process" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IEA] [GO:0051015
"actin filament binding" evidence=IEA] [GO:0005815 "microtubule
organizing center" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035331 "negative
regulation of hippo signaling cascade" evidence=IDA] [GO:1900037
"regulation of cellular response to hypoxia" evidence=IDA]
[GO:0001666 "response to hypoxia" evidence=IDA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IDA] [GO:0005911
"cell-cell junction" evidence=IDA] [GO:0031334 "positive regulation
of protein complex assembly" evidence=IDA] [GO:0035195 "gene
silencing by miRNA" evidence=IMP] [GO:0045294 "alpha-catenin
binding" evidence=IDA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0003714 GO:GO:0031334
Pathway_Interaction_DB:aurora_a_pathway GO:GO:0034613 GO:GO:0046872
GO:GO:0043406 GO:GO:0043123 GO:GO:0008270 GO:GO:0001666
GO:GO:0006351 GO:GO:0003682 GO:GO:0005911 GO:GO:0005925
GO:GO:0030027 GO:GO:0005815 GO:GO:0005667 GO:GO:0000122
GO:GO:0030334 GO:GO:0007049 Gene3D:2.10.110.10 EMBL:AL132780
EMBL:CH471078 GO:GO:0048041 GO:GO:0035313 GO:GO:0000932
GO:GO:0035195 CTD:84962 OMA:YEGSFPG GO:GO:0016339 GO:GO:0046474
GO:GO:0030032 GO:GO:0035331 GO:GO:0033673 GO:GO:0031328
GO:GO:2000637 GO:GO:1900037 GO:GO:0043087 eggNOG:NOG331290
EMBL:AY169959 EMBL:AK096128 EMBL:BC007580 EMBL:BC034968
IPI:IPI00063605 RefSeq:NP_116265.1 RefSeq:NP_932352.1
UniGene:Hs.655832 HSSP:Q05158 ProteinModelPortal:Q96IF1 SMR:Q96IF1
IntAct:Q96IF1 MINT:MINT-1772035 STRING:Q96IF1 PhosphoSite:Q96IF1
DMDM:74751933 PaxDb:Q96IF1 PRIDE:Q96IF1 DNASU:84962
Ensembl:ENST00000262713 Ensembl:ENST00000361265
Ensembl:ENST00000397388 GeneID:84962 KEGG:hsa:84962 UCSC:uc001whz.3
GeneCards:GC14M023441 HGNC:HGNC:20250 HPA:HPA006171 MIM:609066
neXtProt:NX_Q96IF1 PharmGKB:PA134978308 HOGENOM:HOG000113139
HOVERGEN:HBG095660 InParanoid:Q96IF1 OrthoDB:EOG4GMTX9
PhylomeDB:Q96IF1 ChiTaRS:AJUBA GenomeRNAi:84962 NextBio:75479
ArrayExpress:Q96IF1 Bgee:Q96IF1 CleanEx:HS_JUB
Genevestigator:Q96IF1 GO:GO:0045294 Uniprot:Q96IF1
Length = 538
Score = 558 (201.5 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 90/146 (61%), Positives = 115/146 (78%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
++SGFQ+ AEKC +CGHLI+E ILQAMGKSYHPGCFRC +CN+CLDG+PFTVD N++YC
Sbjct: 392 LFSGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYC 451
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH+ +APKCAACG+ I P EG E+ VRV+SMD+D+H +CY CEDC +QL+DE C
Sbjct: 452 VTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCC 511
Query: 514 YPLQGRLMCRACHLSHLSRHHQSPTD 539
+PL G L+C CH+ L+ Q P +
Sbjct: 512 FPLDGHLLCHGCHMQRLNAR-QPPAN 536
Score = 329 (120.9 bits), Expect = 1.3e-28, Sum P(2) = 1.3e-28
Identities = 68/176 (38%), Positives = 92/176 (52%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C C + + G ACQA+ +LYHT CF+CCSCGR LR KAFY+V+G VYCEEDYL+
Sbjct: 334 YFGTCIKCNKGIYGQSNACQALDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDYLF 393
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLI--MEMILQAMGK----- 422
SGFQ+ AEKC +CGHLI+E M + +C +C + + + +
Sbjct: 394 SGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVT 453
Query: 423 SYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
YH +C C + + D+ I DYH C C ++ EG
Sbjct: 454 DYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYH-FECYHCEDCRMQLSDEEG 508
Score = 38 (18.4 bits), Expect = 3.8e-56, Sum P(2) = 3.8e-56
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 11 LDAKCKPVGAIESFLVEGTSRAPAPPP 37
LDA+ G+ E+ EG+ A PPP
Sbjct: 70 LDAERNQRGSFEAPRYEGSFPA-GPPP 95
>UNIPROTKB|I3L8V8 [details] [associations]
symbol:AJUBA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000637 "positive regulation of gene silencing by
miRNA" evidence=IEA] [GO:1900037 "regulation of cellular response
to hypoxia" evidence=IEA] [GO:0051015 "actin filament binding"
evidence=IEA] [GO:0048041 "focal adhesion assembly" evidence=IEA]
[GO:0046474 "glycerophospholipid biosynthetic process"
evidence=IEA] [GO:0045294 "alpha-catenin binding" evidence=IEA]
[GO:0043406 "positive regulation of MAP kinase activity"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043087 "regulation of
GTPase activity" evidence=IEA] [GO:0035331 "negative regulation of
hippo signaling cascade" evidence=IEA] [GO:0035313 "wound healing,
spreading of epidermal cells" evidence=IEA] [GO:0035195 "gene
silencing by miRNA" evidence=IEA] [GO:0034613 "cellular protein
localization" evidence=IEA] [GO:0033673 "negative regulation of
kinase activity" evidence=IEA] [GO:0031334 "positive regulation of
protein complex assembly" evidence=IEA] [GO:0031328 "positive
regulation of cellular biosynthetic process" evidence=IEA]
[GO:0030334 "regulation of cell migration" evidence=IEA]
[GO:0030032 "lamellipodium assembly" evidence=IEA] [GO:0030027
"lamellipodium" evidence=IEA] [GO:0016339 "calcium-dependent
cell-cell adhesion" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS50023 SMART:SM00132 GO:GO:0005829 GO:GO:0003714
GO:GO:0031334 GO:GO:0034613 GO:GO:0046872 GO:GO:0043406
GO:GO:0043123 GO:GO:0008270 GO:GO:0001666 GO:GO:0003682
GO:GO:0005925 GO:GO:0030027 GO:GO:0005667 GO:GO:0000122
GO:GO:0030334 Gene3D:2.10.110.10 GO:GO:0048041 GO:GO:0035313
GO:GO:0000932 GO:GO:0035195 GeneTree:ENSGT00610000085810
GO:GO:0016339 GO:GO:0046474 GO:GO:0030032 GO:GO:0035331
GO:GO:0033673 GO:GO:0031328 GO:GO:2000637 GO:GO:1900037
GO:GO:0043087 Ensembl:ENSSSCT00000023963 OMA:RQPSANY Uniprot:I3L8V8
Length = 328
Score = 558 (201.5 bits), Expect = 5.5e-54, P = 5.5e-54
Identities = 89/143 (62%), Positives = 113/143 (79%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
++SGFQ+ AEKC +CGHLI+E ILQAMGKSYHPGCFRC +CN+CLDG+PFTVD N++YC
Sbjct: 182 LFSGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCVVCNKCLDGIPFTVDFSNQVYC 241
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V DYH+ +APKCAACG+ I P EG E+ VRV+SMD+D+H +CY CEDC +QL+DE C
Sbjct: 242 VTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYHFECYHCEDCRMQLSDEEGCCC 301
Query: 514 YPLQGRLMCRACHLSHLSRHHQS 536
+PL G L+C CH+ L+ S
Sbjct: 302 FPLDGHLLCHGCHMQRLNARQPS 324
Score = 277 (102.6 bits), Expect = 8.9e-24, P = 8.9e-24
Identities = 63/176 (35%), Positives = 86/176 (48%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C C + + +LYHT CF+CCSCGR LR KAFY+V+G VYCEEDYL+
Sbjct: 133 YFGTCIKCNKGI---------YDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDYLF 183
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLI--MEMILQAMGK----- 422
SGFQ+ AEKC +CGHLI+E M + +C +C + + + +
Sbjct: 184 SGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCVVCNKCLDGIPFTVDFSNQVYCVT 243
Query: 423 SYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
YH +C C + + D+ I DYH C C ++ EG
Sbjct: 244 DYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYH-FECYHCEDCRMQLSDEEG 298
>ZFIN|ZDB-GENE-030131-9341 [details] [associations]
symbol:ajuba "ajuba LIM protein" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-030131-9341 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 CTD:84962 GeneTree:ENSGT00610000085810
EMBL:CR936517 EMBL:CT027785 IPI:IPI00901390 RefSeq:XP_701366.4
UniGene:Dr.39628 Ensembl:ENSDART00000111923 GeneID:572549
KEGG:dre:572549 NextBio:20890992 Bgee:E7FFI0 Uniprot:E7FFI0
Length = 688
Score = 546 (197.3 bits), Expect = 1.0e-52, P = 1.0e-52
Identities = 89/144 (61%), Positives = 115/144 (79%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
M+SGFQ+ AEKC++CGHLI+E ILQA+G SYHPGCFRC +C++ LDGVPFTVD N +YC
Sbjct: 540 MFSGFQEAAEKCSVCGHLILEQILQALGNSYHPGCFRCTVCSKALDGVPFTVDYLNNVYC 599
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
V+DY+R FAPKCAAC + I P EG+EE +RVVSM+KD+H +CY CE+CG QL+DEP +C
Sbjct: 600 VSDYNRTFAPKCAACLQPILPAEGSEEILRVVSMNKDYHFECYHCEECGKQLSDEPGSQC 659
Query: 514 YPLQGRLMCRACHLSHLSRHHQSP 537
+PL L+C +CH+S + H P
Sbjct: 660 FPLDAHLLCHSCHMSRVCVTHNLP 683
Score = 334 (122.6 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 72/197 (36%), Positives = 103/197 (52%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CG+ V GA ACQA+ +LYHT CF C SCGR LR K FYNV+G VYC+EDY++
Sbjct: 482 YFGTCVKCGKGVYGADNACQALDSLYHTRCFTCVSCGRTLRNKDFYNVNGSVYCKEDYMF 541
Query: 375 SGFQQTAEKCAICGHLIMEMY-----SGFQQTAEKCAICGHLI--MEMILQAMGKSYHPG 427
SGFQ+ AEKC++CGHLI+E + + +C +C + + + + Y
Sbjct: 542 SGFQEAAEKCSVCGHLILEQILQALGNSYHPGCFRCTVCSKALDGVPFTVDYLNNVYCVS 601
Query: 428 CFRCCL---CNECLDGV-PFTVDVDN-KIYCVN-DYHRMFAPKCAACGKGITPVEGTEET 481
+ C CL + P + ++ +N DYH C CGK ++ G++
Sbjct: 602 DYNRTFAPKCAACLQPILPAEGSEEILRVVSMNKDYH-FECYHCEECGKQLSDEPGSQ-- 658
Query: 482 VRVVSMDKDFHVDCYMC 498
D H+ C+ C
Sbjct: 659 ----CFPLDAHLLCHSC 671
>UNIPROTKB|F1PTW0 [details] [associations]
symbol:WTIP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000637 "positive regulation of gene
silencing by miRNA" evidence=IEA] [GO:0035331 "negative regulation
of hippo signaling cascade" evidence=IEA] [GO:0035195 "gene
silencing by miRNA" evidence=IEA] [GO:0022604 "regulation of cell
morphogenesis" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0001666 "response to hypoxia"
evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing body"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0003714 GO:GO:0007010 GO:GO:0046872
GO:GO:0008270 GO:GO:0001666 Gene3D:2.10.110.10 GO:GO:0000932
GO:GO:0035195 GeneTree:ENSGT00610000085810 GO:GO:0035331
GO:GO:2000637 GO:GO:0022604 EMBL:AAEX03001037 EMBL:AAEX03001033
EMBL:AAEX03001034 EMBL:AAEX03001035 EMBL:AAEX03001036
Ensembl:ENSCAFT00000011598 Uniprot:F1PTW0
Length = 303
Score = 535 (193.4 bits), Expect = 1.5e-51, P = 1.5e-51
Identities = 92/136 (67%), Positives = 110/136 (80%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQTA+KC++CGHLIMEMILQA+GKSYHPGCFRC +CNECLDGVPFTVDV+N IYC
Sbjct: 151 LYSGFQQTADKCSVCGHLIMEMILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYC 210
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR- 512
V DYH +FAPKCA+C + I P +G E T+RVVSMD+D+HV+CY CEDCGLQ +
Sbjct: 211 VRDYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVECYHCEDCGLQAEAALGRES 270
Query: 513 CYPLQGRLMC-RACHL 527
C+P +G C RA L
Sbjct: 271 CFPTRGLTWCPRATML 286
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 83/203 (40%), Positives = 107/203 (52%)
Query: 284 RPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQAMGNLYHTN 343
R GP+ AER++ YFGIC CG + GA QACQAMG+LYHT+
Sbjct: 63 RDGGPSAAERRLEALTRELERALEARTARD-YFGICIKCGLGIYGARQACQAMGSLYHTD 121
Query: 344 CFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMY-----SGF 398
CF C SCGR LRGKAFYNV +VYC+ED+LYSGFQQTA+KC++CGHLIMEM +
Sbjct: 122 CFTCDSCGRRLRGKAFYNVGDKVYCQEDFLYSGFQQTADKCSVCGHLIMEMILQALGKSY 181
Query: 399 QQTAEKCAICGHLI--------MEMILQAMGKSYH----PGCFRCCLCNECLDGVPFTVD 446
+C++C + +E + + + YH P C C G T+
Sbjct: 182 HPGCFRCSVCNECLDGVPFTVDVENNIYCV-RDYHTVFAPKCASCARPILPAQGCETTIR 240
Query: 447 VDNKIYCVNDYHRMFAPKCAACG 469
V + DYH + C CG
Sbjct: 241 V---VSMDRDYH-VECYHCEDCG 259
>UNIPROTKB|E1C3G9 [details] [associations]
symbol:WTIP "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000932
"cytoplasmic mRNA processing body" evidence=IEA] [GO:0001666
"response to hypoxia" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0022604 "regulation of cell
morphogenesis" evidence=IEA] [GO:0035195 "gene silencing by miRNA"
evidence=IEA] [GO:0035331 "negative regulation of hippo signaling
cascade" evidence=IEA] [GO:2000637 "positive regulation of gene
silencing by miRNA" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS50023 SMART:SM00132 GO:GO:0003714 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 GO:GO:0001666 Gene3D:2.10.110.10
GO:GO:0000932 GO:GO:0035195 GeneTree:ENSGT00610000085810
GO:GO:0035331 GO:GO:2000637 GO:GO:0022604 EMBL:AADN02031801
EMBL:AADN02031802 EMBL:AADN02031803 EMBL:AADN02031804
EMBL:AADN02031805 EMBL:AADN02031806 EMBL:AADN02031807
EMBL:AADN02031808 EMBL:AADN02031809 EMBL:AADN02031810
IPI:IPI00598871 Ensembl:ENSGALT00000007993 ArrayExpress:E1C3G9
Uniprot:E1C3G9
Length = 135
Score = 515 (186.3 bits), Expect = 2.0e-49, P = 2.0e-49
Identities = 84/117 (71%), Positives = 99/117 (84%)
Query: 415 MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITP 474
MILQA+GKSYHPGCFRC +CNECLDGVPFTVDV+N IYCV DYH +FAPKCA+C + I P
Sbjct: 1 MILQALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCVKDYHTVFAPKCASCNQPILP 60
Query: 475 VEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLSHLS 531
+G+EET+RVVSMDKD+HV+CY CEDCGLQL DE RCYPL+G L+C CH+ L+
Sbjct: 61 AQGSEETIRVVSMDKDYHVECYHCEDCGLQLNDEEGHRCYPLEGHLLCHGCHIRRLN 117
Score = 110 (43.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 26/69 (37%), Positives = 35/69 (50%)
Query: 334 QAMGNLYHTNCFICCSCGRALRGKAF-YNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIM 392
QA+G YH CF C C L G F +V +YC +DY ++ F A KCA C I+
Sbjct: 4 QALGKSYHPGCFRCVVCNECLDGVPFTVDVENNIYCVKDY-HTVF---APKCASCNQPIL 59
Query: 393 EMYSGFQQT 401
G ++T
Sbjct: 60 PA-QGSEET 67
>UNIPROTKB|J9NXN4 [details] [associations]
symbol:WTIP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 EMBL:AAEX03001037 EMBL:AAEX03001033
EMBL:AAEX03001034 EMBL:AAEX03001035 EMBL:AAEX03001036
Ensembl:ENSCAFT00000049215 Uniprot:J9NXN4
Length = 297
Score = 490 (177.5 bits), Expect = 8.8e-47, P = 8.8e-47
Identities = 80/106 (75%), Positives = 95/106 (89%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQTA+KC++CGHLIMEMILQA+GKSYHPGCFRC +CNECLDGVPFTVDV+N IYC
Sbjct: 192 LYSGFQQTADKCSVCGHLIMEMILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYC 251
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCE 499
V DYH +FAPKCA+C + I P +G E T+RVVSMD+D+HV+CY CE
Sbjct: 252 VRDYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVECYHCE 297
Score = 363 (132.8 bits), Expect = 2.5e-33, P = 2.5e-33
Identities = 68/134 (50%), Positives = 85/134 (63%)
Query: 284 RPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQAMGNLYHTN 343
R GP+ AER++ YFGIC CG + GA QACQAMG+LYHT+
Sbjct: 104 RDGGPSAAERRLEALTRELERALEARTARD-YFGICIKCGLGIYGARQACQAMGSLYHTD 162
Query: 344 CFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMY-----SGF 398
CF C SCGR LRGKAFYNV +VYC+ED+LYSGFQQTA+KC++CGHLIMEM +
Sbjct: 163 CFTCDSCGRRLRGKAFYNVGDKVYCQEDFLYSGFQQTADKCSVCGHLIMEMILQALGKSY 222
Query: 399 QQTAEKCAICGHLI 412
+C++C +
Sbjct: 223 HPGCFRCSVCNECL 236
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/111 (32%), Positives = 48/111 (43%)
Query: 405 CAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY----H 458
C CG I QAMG YH CF C C L G F +V +K+YC D+
Sbjct: 138 CIKCGLGIYGARQACQAMGSLYHTDCFTCDSCGRRLRGKAF-YNVGDKVYCQEDFLYSGF 196
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEP 509
+ A KC+ CG I E + + ++ K +H C+ C C L P
Sbjct: 197 QQTADKCSVCGHLIM------EMI-LQALGKSYHPGCFRCSVCNECLDGVP 240
Score = 115 (45.5 bits), Expect = 0.00063, P = 0.00063
Identities = 27/75 (36%), Positives = 34/75 (45%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAF-YNVHGRVYCEEDYLYSGF 377
C CG + QA+G YH CF C C L G F +V +YC DY ++ F
Sbjct: 203 CSVCGHLIME--MILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYCVRDY-HTVF 259
Query: 378 QQTAEKCAICGHLIM 392
A KCA C I+
Sbjct: 260 ---APKCASCARPIL 271
>UNIPROTKB|K7EKM1 [details] [associations]
symbol:WTIP "Wilms tumor protein 1-interacting protein"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 Gene3D:2.10.110.10 EMBL:AC008747
HGNC:HGNC:20964 Ensembl:ENST00000585928 Uniprot:K7EKM1
Length = 200
Score = 486 (176.1 bits), Expect = 2.3e-46, P = 2.3e-46
Identities = 80/106 (75%), Positives = 94/106 (88%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQTA+KC++CGHLIMEMILQA+GKSYHPGCFRC +CNECLDGVPFTVDV+N IYC
Sbjct: 95 LYSGFQQTADKCSVCGHLIMEMILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYC 154
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCE 499
V DYH +FAPKCA+C + I P +G E T+RVVSMD+D+HV CY CE
Sbjct: 155 VRDYHTVFAPKCASCARPILPAQGCETTIRVVSMDRDYHVACYHCE 200
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 69/136 (50%), Positives = 86/136 (63%)
Query: 282 PPRPMGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQAMGNLYH 341
P R GP+ AER++ YFGIC CG + GA QACQAMG+LYH
Sbjct: 5 PGREGGPSAAERRLEALTRELERALEARTARD-YFGICIKCGLGIYGAQQACQAMGSLYH 63
Query: 342 TNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMY-----S 396
T+CF C SCGR LRGKAFYNV +VYC+ED+LYSGFQQTA+KC++CGHLIMEM
Sbjct: 64 TDCFTCDSCGRRLRGKAFYNVGEKVYCQEDFLYSGFQQTADKCSVCGHLIMEMILQALGK 123
Query: 397 GFQQTAEKCAICGHLI 412
+ +C++C +
Sbjct: 124 SYHPGCFRCSVCNECL 139
Score = 130 (50.8 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 36/111 (32%), Positives = 48/111 (43%)
Query: 405 CAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY----H 458
C CG I + QAMG YH CF C C L G F +V K+YC D+
Sbjct: 41 CIKCGLGIYGAQQACQAMGSLYHTDCFTCDSCGRRLRGKAF-YNVGEKVYCQEDFLYSGF 99
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEP 509
+ A KC+ CG I E + + ++ K +H C+ C C L P
Sbjct: 100 QQTADKCSVCGHLIM------EMI-LQALGKSYHPGCFRCSVCNECLDGVP 143
Score = 115 (45.5 bits), Expect = 0.00020, P = 0.00020
Identities = 27/75 (36%), Positives = 34/75 (45%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAF-YNVHGRVYCEEDYLYSGF 377
C CG + QA+G YH CF C C L G F +V +YC DY ++ F
Sbjct: 106 CSVCGHLIME--MILQALGKSYHPGCFRCSVCNECLDGVPFTVDVENNIYCVRDY-HTVF 162
Query: 378 QQTAEKCAICGHLIM 392
A KCA C I+
Sbjct: 163 ---APKCASCARPIL 174
>UNIPROTKB|E1BMD6 [details] [associations]
symbol:LPP "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 CTD:4026 KO:K16676 OMA:NDSDPAY
EMBL:DAAA02001815 EMBL:DAAA02001816 EMBL:DAAA02001817
EMBL:DAAA02001818 EMBL:DAAA02001819 EMBL:DAAA02001820
EMBL:DAAA02001821 EMBL:DAAA02001822 EMBL:DAAA02001823
EMBL:DAAA02001824 EMBL:DAAA02001825 EMBL:DAAA02001826
EMBL:DAAA02001827 IPI:IPI00694267 RefSeq:NP_001179520.1
UniGene:Bt.105330 Ensembl:ENSBTAT00000061134 GeneID:524132
KEGG:bta:524132 NextBio:20873896 Uniprot:E1BMD6
Length = 614
Score = 419 (152.6 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 65/130 (50%), Positives = 94/130 (72%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
T E+C++C IME IL+A GK+YHP CF C +C+ LDG+PFTVD I+C+ D+H+
Sbjct: 474 TLEQCSVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKK 533
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
FAP+C+ C + I P G EETVR+V++D+DFHV CY CEDCG L++ ++ CYPL G +
Sbjct: 534 FAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHI 593
Query: 521 MCRACHLSHL 530
+C+ C+ + +
Sbjct: 594 LCKTCNSARI 603
Score = 214 (80.4 bits), Expect = 4.5e-15, Sum P(3) = 4.5e-15
Identities = 60/205 (29%), Positives = 91/205 (44%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G C AM ++H +CF C C LRG+ FY V + YCE Y+
Sbjct: 414 YFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYI- 472
Query: 375 SGFQQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMI---LQAMG----- 421
T E+C++C IME +G + C +C H ++ I + A G
Sbjct: 473 ----NTLEQCSVCSKPIMERILRATGKAYHPHCFTCVMC-HRSLDGIPFTVDAGGLIHCI 527
Query: 422 KSYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
+ +H RC +C E + P + + D+H + +C CG G+ EG +
Sbjct: 528 EDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFH-VHCYRCEDCG-GLLS-EGDNQ 584
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQL 505
+ D H+ C C +++
Sbjct: 585 GCYPL----DGHILCKTCNSARIRV 605
Score = 46 (21.3 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 23 SFLVEGTSRAPAPPPVDYKQYE-RGN 47
S L G+ P PPP+D + +GN
Sbjct: 79 SALPSGSGNFPPPPPLDDNAFRGQGN 104
Score = 43 (20.2 bits), Expect = 2.5e-45, Sum P(3) = 2.5e-45
Identities = 17/84 (20%), Positives = 33/84 (39%)
Query: 165 QPQVPQGLKYIRDYPPYEAPPV-YENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVY 223
+P+ PQG PP P ++ + N+PP + + A + P+
Sbjct: 138 KPRPPQGTTSSTASPPVSTPVTGHKRMVIPNQPPLTATKKSTMKPQPAPQAGPIPVAPI- 196
Query: 224 SRANTVTSKAVPVKTATSLSVTPN 247
T+ + PV + + + TP+
Sbjct: 197 ---GTLKPQPQPVPASYTTASTPS 217
Score = 39 (18.8 bits), Expect = 1.3e-44, Sum P(3) = 1.3e-44
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 27 EGTSRAPAPPPVD 39
EG P PPP+D
Sbjct: 64 EGDFLPPPPPPLD 76
>RGD|1310535 [details] [associations]
symbol:Lpp "LIM domain containing preferred translocation
partner in lipoma" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0005925 "focal adhesion"
evidence=IEA;ISO] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:1310535
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0007155 GO:GO:0005925 Gene3D:2.10.110.10 CTD:4026
eggNOG:NOG279196 HOGENOM:HOG000220910 HOVERGEN:HBG093602 KO:K16676
OrthoDB:EOG4XKV6J EMBL:BC083627 EMBL:BC083890 IPI:IPI00559131
RefSeq:NP_001013886.1 UniGene:Rn.206503 ProteinModelPortal:Q5XI07
SMR:Q5XI07 STRING:Q5XI07 PhosphoSite:Q5XI07 PRIDE:Q5XI07
GeneID:288010 KEGG:rno:288010 UCSC:RGD:1310535 InParanoid:Q5XI07
NextBio:627412 ArrayExpress:Q5XI07 Genevestigator:Q5XI07
GermOnline:ENSRNOG00000031669 Uniprot:Q5XI07
Length = 632
Score = 418 (152.2 bits), Expect = 2.6e-45, Sum P(3) = 2.6e-45
Identities = 65/130 (50%), Positives = 95/130 (73%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
T E+C++C IME IL+A GK+YHP CF C +C+ LDG+PFTVD I+C+ D+H+
Sbjct: 492 TLEQCSVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDACGLIHCIEDFHKK 551
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
FAP+C+ C + I P G EETVR+V++D+DFHV CY CEDCG L++ ++ CYPL G +
Sbjct: 552 FAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHI 611
Query: 521 MCRACHLSHL 530
+C++C+ + +
Sbjct: 612 LCKSCNSARI 621
Score = 212 (79.7 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 60/205 (29%), Positives = 91/205 (44%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G C AM ++H +CF C C LRG+ FY V + YCE Y+
Sbjct: 432 YFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCMVCDIKLRGQPFYAVEKKAYCEPCYI- 490
Query: 375 SGFQQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMI---LQAMG----- 421
T E+C++C IME +G + C +C H ++ I + A G
Sbjct: 491 ----NTLEQCSVCSKPIMERILRATGKAYHPHCFTCVMC-HRSLDGIPFTVDACGLIHCI 545
Query: 422 KSYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
+ +H RC +C E + P + + D+H + +C CG G+ EG +
Sbjct: 546 EDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFH-VHCYRCEDCG-GLLS-EGDNQ 602
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQL 505
+ D H+ C C +++
Sbjct: 603 GCYPL----DGHILCKSCNSARIRV 623
Score = 110 (43.8 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCR 523
+CA CG+ + EGT T +MD+ FHVDC+ C C ++L +P Y ++ + C
Sbjct: 435 RCARCGENVVG-EGTGCT----AMDQVFHVDCFTCMVCDIKLRGQP---FYAVEKKAYCE 486
Query: 524 ACHLSHLSR 532
C+++ L +
Sbjct: 487 PCYINTLEQ 495
Score = 49 (22.3 bits), Expect = 2.6e-45, Sum P(3) = 2.6e-45
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 180 PYE--APPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVK 237
PY+ APP + + PP PV G H++M I P ++ + +A+P+
Sbjct: 137 PYKPRAPP--GSSSSIASPPV---STPVTG--HKRMVIPQQPPLTATKKSATKPQAIPIP 189
Query: 238 TATSLSVTPNYQ 249
++ P Q
Sbjct: 190 VTPIGTLKPQPQ 201
Score = 45 (20.9 bits), Expect = 2.6e-45, Sum P(3) = 2.6e-45
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 28 GTSRAPAPPPVDYKQY--ERGN 47
G+ P PPP+D + +RGN
Sbjct: 84 GSGHFPPPPPLDEGAFIVQRGN 105
Score = 38 (18.4 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 27 EGTSRAPAPPPVDYKQYERGNIIASS-KFATPKSVD 61
EG P PPP++ + G I + S F P +D
Sbjct: 64 EGDFLPPPPPPLE----DPGTIPSGSGHFPPPPPLD 95
>UNIPROTKB|Q5XI07 [details] [associations]
symbol:Lpp "Lipoma-preferred partner homolog" species:10116
"Rattus norvegicus" [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1310535 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0007155 GO:GO:0005925 Gene3D:2.10.110.10 CTD:4026
eggNOG:NOG279196 HOGENOM:HOG000220910 HOVERGEN:HBG093602 KO:K16676
OrthoDB:EOG4XKV6J EMBL:BC083627 EMBL:BC083890 IPI:IPI00559131
RefSeq:NP_001013886.1 UniGene:Rn.206503 ProteinModelPortal:Q5XI07
SMR:Q5XI07 STRING:Q5XI07 PhosphoSite:Q5XI07 PRIDE:Q5XI07
GeneID:288010 KEGG:rno:288010 UCSC:RGD:1310535 InParanoid:Q5XI07
NextBio:627412 ArrayExpress:Q5XI07 Genevestigator:Q5XI07
GermOnline:ENSRNOG00000031669 Uniprot:Q5XI07
Length = 632
Score = 418 (152.2 bits), Expect = 2.6e-45, Sum P(3) = 2.6e-45
Identities = 65/130 (50%), Positives = 95/130 (73%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
T E+C++C IME IL+A GK+YHP CF C +C+ LDG+PFTVD I+C+ D+H+
Sbjct: 492 TLEQCSVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDACGLIHCIEDFHKK 551
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
FAP+C+ C + I P G EETVR+V++D+DFHV CY CEDCG L++ ++ CYPL G +
Sbjct: 552 FAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHI 611
Query: 521 MCRACHLSHL 530
+C++C+ + +
Sbjct: 612 LCKSCNSARI 621
Score = 212 (79.7 bits), Expect = 2.8e-15, Sum P(3) = 2.8e-15
Identities = 60/205 (29%), Positives = 91/205 (44%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G C AM ++H +CF C C LRG+ FY V + YCE Y+
Sbjct: 432 YFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCMVCDIKLRGQPFYAVEKKAYCEPCYI- 490
Query: 375 SGFQQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMI---LQAMG----- 421
T E+C++C IME +G + C +C H ++ I + A G
Sbjct: 491 ----NTLEQCSVCSKPIMERILRATGKAYHPHCFTCVMC-HRSLDGIPFTVDACGLIHCI 545
Query: 422 KSYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
+ +H RC +C E + P + + D+H + +C CG G+ EG +
Sbjct: 546 EDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFH-VHCYRCEDCG-GLLS-EGDNQ 602
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQL 505
+ D H+ C C +++
Sbjct: 603 GCYPL----DGHILCKSCNSARIRV 623
Score = 110 (43.8 bits), Expect = 0.00066, Sum P(3) = 0.00066
Identities = 23/69 (33%), Positives = 39/69 (56%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCR 523
+CA CG+ + EGT T +MD+ FHVDC+ C C ++L +P Y ++ + C
Sbjct: 435 RCARCGENVVG-EGTGCT----AMDQVFHVDCFTCMVCDIKLRGQP---FYAVEKKAYCE 486
Query: 524 ACHLSHLSR 532
C+++ L +
Sbjct: 487 PCYINTLEQ 495
Score = 49 (22.3 bits), Expect = 2.6e-45, Sum P(3) = 2.6e-45
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 180 PYE--APPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVK 237
PY+ APP + + PP PV G H++M I P ++ + +A+P+
Sbjct: 137 PYKPRAPP--GSSSSIASPPV---STPVTG--HKRMVIPQQPPLTATKKSATKPQAIPIP 189
Query: 238 TATSLSVTPNYQ 249
++ P Q
Sbjct: 190 VTPIGTLKPQPQ 201
Score = 45 (20.9 bits), Expect = 2.6e-45, Sum P(3) = 2.6e-45
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 28 GTSRAPAPPPVDYKQY--ERGN 47
G+ P PPP+D + +RGN
Sbjct: 84 GSGHFPPPPPLDEGAFIVQRGN 105
Score = 38 (18.4 bits), Expect = 1.4e-44, Sum P(3) = 1.4e-44
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 27 EGTSRAPAPPPVDYKQYERGNIIASS-KFATPKSVD 61
EG P PPP++ + G I + S F P +D
Sbjct: 64 EGDFLPPPPPPLE----DPGTIPSGSGHFPPPPPLD 95
>UNIPROTKB|E2R8L1 [details] [associations]
symbol:AJUBA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070652 "HAUS complex" evidence=IEA]
[GO:0051297 "centrosome organization" evidence=IEA] [GO:0051225
"spindle assembly" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR026214
PRINTS:PR02090 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0051225 GO:GO:0051297 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00610000085810 GO:GO:0070652
EMBL:AAEX03005604 Ensembl:ENSCAFT00000017913 NextBio:20855289
Uniprot:E2R8L1
Length = 870
Score = 460 (167.0 bits), Expect = 5.8e-45, Sum P(2) = 5.8e-45
Identities = 73/106 (68%), Positives = 91/106 (85%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
++SGFQ+ AEKC +CGHLI+E ILQAMGKSYHPGCFRC +CN+CLDG+PFTVD N++YC
Sbjct: 402 LFSGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYC 461
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCE 499
V DYH+ +APKCAACG+ I P EG E+ VRV+SMD+D+H +CY CE
Sbjct: 462 VTDYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYHFECYHCE 507
Score = 332 (121.9 bits), Expect = 1.1e-28, Sum P(2) = 1.1e-28
Identities = 73/186 (39%), Positives = 96/186 (51%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C C + + G ACQA+ +LYHT CF+CCSCGR LR KAFY+V+G VYCEEDYL+
Sbjct: 344 YFGTCIKCNKGIYGQSNACQALDSLYHTQCFVCCSCGRTLRCKAFYSVNGSVYCEEDYLF 403
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLI--MEMILQAMGK----- 422
SGFQ+ AEKC +CGHLI+E M + +C +C + + + +
Sbjct: 404 SGFQEAAEKCCVCGHLILEKILQAMGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVT 463
Query: 423 SYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCA-ACGKGITPVEGTEE 480
YH +C C + + D+ I DYH C A G P EG E
Sbjct: 464 DYHKNYAPKCAACGQPILPSEGCEDIVRVISMDRDYH-FECYHCEMASGDFCLPGEGMEV 522
Query: 481 TVRVVS 486
+V S
Sbjct: 523 LQQVCS 528
Score = 46 (21.3 bits), Expect = 5.8e-45, Sum P(2) = 5.8e-45
Identities = 12/27 (44%), Positives = 16/27 (59%)
Query: 11 LDAKCKPVGAIESFLVEGTSRAPAPPP 37
LDA+ P G+ E+ EG S + PPP
Sbjct: 80 LDAERNPRGSFEAQRYEG-SFSGGPPP 105
>UNIPROTKB|Q15654 [details] [associations]
symbol:TRIP6 "Thyroid receptor-interacting protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0046966 "thyroid hormone receptor binding"
evidence=NAS] [GO:0019900 "kinase binding" evidence=IPI]
[GO:0008588 "release of cytoplasmic sequestered NF-kappaB"
evidence=IDA] [GO:0045323 "interleukin-1 receptor complex"
evidence=IDA] [GO:0005149 "interleukin-1 receptor binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030335 "positive regulation of cell migration" evidence=IMP]
[GO:0005925 "focal adhesion" evidence=IDA] [GO:0048041 "focal
adhesion assembly" evidence=NAS] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 EMBL:L40374
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0005856
GO:GO:0046872 GO:GO:0008270 GO:GO:0006351 GO:GO:0005925
Gene3D:2.10.110.10 EMBL:CH236956 EMBL:CH471091 EMBL:AF312032
GO:GO:0048041 Pathway_Interaction_DB:lysophospholipid_pathway
GO:GO:0030335 GO:GO:0046966 GO:GO:0008588 GO:GO:0005149
eggNOG:NOG279196 HOVERGEN:HBG093602 CTD:7205 KO:K12792
OrthoDB:EOG44J2J8 EMBL:AJ001902 EMBL:AF000974 EMBL:AF093836
EMBL:AF093834 EMBL:AF093835 EMBL:AK291906 EMBL:BC002680
EMBL:BC004249 EMBL:BC004999 EMBL:BC021540 EMBL:BC028985
IPI:IPI00301561 RefSeq:NP_003293.2 UniGene:Hs.534360 PDB:1X61
PDB:2DLO PDBsum:1X61 PDBsum:2DLO ProteinModelPortal:Q15654
SMR:Q15654 IntAct:Q15654 MINT:MINT-1366827 STRING:Q15654
PhosphoSite:Q15654 DMDM:20981729 PaxDb:Q15654 PeptideAtlas:Q15654
PRIDE:Q15654 DNASU:7205 Ensembl:ENST00000200457 GeneID:7205
KEGG:hsa:7205 UCSC:uc003uww.3 GeneCards:GC07P100464
H-InvDB:HIX0167828 HGNC:HGNC:12311 HPA:CAB046454 HPA:CAB046460
MIM:602933 neXtProt:NX_Q15654 PharmGKB:PA36989 InParanoid:Q15654
PhylomeDB:Q15654 ChiTaRS:TRIP6 EvolutionaryTrace:Q15654
GenomeRNAi:7205 NextBio:28238 ArrayExpress:Q15654 Bgee:Q15654
CleanEx:HS_TRIP6 Genevestigator:Q15654 GermOnline:ENSG00000087077
Uniprot:Q15654
Length = 476
Score = 435 (158.2 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 69/126 (54%), Positives = 95/126 (75%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
T EKCA C I++ IL+AMGK+YHPGCF C +C+ LDG+PFTVD ++I+C+ D+HR
Sbjct: 335 TLEKCATCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRK 394
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPD-KRCYPLQGR 519
FAP+C+ CG I P G EETVR+V++D+ FH+ CY CE+CGL L+ E + + CYPL G
Sbjct: 395 FAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIGCYKCEECGLLLSSEGECQGCYPLDGH 454
Query: 520 LMCRAC 525
++C+AC
Sbjct: 455 ILCKAC 460
Score = 184 (69.8 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 57/204 (27%), Positives = 83/204 (40%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G A+ ++H CF+C +C LRG+ FY V R YCE Y+
Sbjct: 275 YFGQCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCEGCYV- 333
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCF 429
T EKCA C I++ M + C +C H ++ I + + C
Sbjct: 334 ----ATLEKCATCSQPILDRILRAMGKAYHPGCFTCVVC-HRGLDGIPFTVDATSQIHCI 388
Query: 430 ---------RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
RC +C + P + + +H + KC CG ++ EG E
Sbjct: 389 EDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFH-IGCYKCEECGLLLSS-EG--E 444
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQ 504
+D H+ C C +Q
Sbjct: 445 CQGCYPLDG--HILCKACSAWRIQ 466
Score = 47 (21.6 bits), Expect = 3.7e-44, Sum P(2) = 3.7e-44
Identities = 19/66 (28%), Positives = 25/66 (37%)
Query: 179 PPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVKT 238
PP PP Y P P P P +GG +P Y+ A+T A PV+
Sbjct: 125 PP--PPPAYRTGSLKPNPASPLPASP-YGGP---------TPASYTTASTPAGPAFPVQV 172
Query: 239 ATSLSV 244
+ V
Sbjct: 173 KVAQPV 178
>UNIPROTKB|Q5F464 [details] [associations]
symbol:LPP "Lipoma-preferred partner homolog" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0007155
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00610000085810
EMBL:AJ851436 IPI:IPI00579566 RefSeq:NP_001026738.1
UniGene:Gga.22742 ProteinModelPortal:Q5F464 SMR:Q5F464
Ensembl:ENSGALT00000011871 GeneID:429148 KEGG:gga:429148 CTD:4026
eggNOG:NOG279196 HOGENOM:HOG000220910 HOVERGEN:HBG093602
InParanoid:Q5F464 KO:K16676 OMA:NDSDPAY OrthoDB:EOG4XKV6J
NextBio:20829961 Uniprot:Q5F464
Length = 604
Score = 424 (154.3 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 68/141 (48%), Positives = 99/141 (70%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
T E+C++C IME IL+A GK+YHP CF C +C+ LDG+PFTVD I+C+ D+H+
Sbjct: 464 TLEQCSVCAKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGNIHCIEDFHKK 523
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
FAP+C+ C + I P G EETVR+V++D+DFHV CY CEDCG L++ ++ CYPL G +
Sbjct: 524 FAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVQCYRCEDCGGLLSEGDNQGCYPLDGHI 583
Query: 521 MCRACHLSHLSR-HHQSPTDL 540
+C+ C+ + + ++ TDL
Sbjct: 584 LCKTCNSARIQALTAKASTDL 604
Score = 215 (80.7 bits), Expect = 7.8e-16, Sum P(2) = 7.8e-16
Identities = 61/204 (29%), Positives = 89/204 (43%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G C AM ++H CF C C LRG+ FY V + YCE Y+
Sbjct: 404 YFGRCARCGENVVGEGTGCTAMDQVFHVECFTCMMCNNKLRGQPFYAVEKKAYCEPCYI- 462
Query: 375 SGFQQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMI---LQAMG----- 421
T E+C++C IME +G + C +C H ++ I + A G
Sbjct: 463 ----NTLEQCSVCAKPIMERILRATGKAYHPHCFTCVMC-HRSLDGIPFTVDAGGNIHCI 517
Query: 422 KSYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
+ +H RC +C E + P + + D+H + +C CG G+ EG +
Sbjct: 518 EDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFH-VQCYRCEDCG-GLLS-EGDNQ 574
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQ 504
+ D H+ C C +Q
Sbjct: 575 GCYPL----DGHILCKTCNSARIQ 594
Score = 57 (25.1 bits), Expect = 4.7e-44, Sum P(2) = 4.7e-44
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 27 EGTSRAPAPPPVDYKQYERGNIIASSKFATPKSVDNL 63
+G P PPPVD + GNI + F P +D++
Sbjct: 64 DGDFLPPPPPPVD----DLGNITSQGAFPPPPPLDDV 96
>MGI|MGI:1343458 [details] [associations]
symbol:Trip6 "thyroid hormone receptor interactor 6"
species:10090 "Mus musculus" [GO:0005149 "interleukin-1 receptor
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008588 "release of
cytoplasmic sequestered NF-kappaB" evidence=ISO] [GO:0019900
"kinase binding" evidence=ISO] [GO:0030054 "cell junction"
evidence=IEA] [GO:0030335 "positive regulation of cell migration"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 MGI:MGI:1343458 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0007155 GO:GO:0006351 GO:GO:0005925 GO:GO:0019900
Gene3D:2.10.110.10 EMBL:AF312033 GO:GO:0030335
GeneTree:ENSGT00610000085810 GO:GO:0008588 GO:GO:0005149
GO:GO:0045323 HSSP:Q15654 eggNOG:NOG279196 HOGENOM:HOG000220910
HOVERGEN:HBG093602 CTD:7205 KO:K12792 OMA:HREPGPG OrthoDB:EOG44J2J8
EMBL:AF116823 EMBL:AF097511 EMBL:AK010435 EMBL:AK159387
IPI:IPI00130632 RefSeq:NP_035769.1 UniGene:Mm.27063
ProteinModelPortal:Q9Z1Y4 SMR:Q9Z1Y4 IntAct:Q9Z1Y4 STRING:Q9Z1Y4
PhosphoSite:Q9Z1Y4 PaxDb:Q9Z1Y4 PRIDE:Q9Z1Y4
Ensembl:ENSMUST00000024119 GeneID:22051 KEGG:mmu:22051
InParanoid:Q9Z1Y4 NextBio:301840 Bgee:Q9Z1Y4 CleanEx:MM_TRIP6
Genevestigator:Q9Z1Y4 Uniprot:Q9Z1Y4
Length = 480
Score = 433 (157.5 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 69/131 (52%), Positives = 97/131 (74%)
Query: 396 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVN 455
S + T EKC+ C I++ IL+AMGK+YHPGCF C +C+ LDG+PFTVD ++I+C+
Sbjct: 334 SCYVATLEKCSTCSEPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIE 393
Query: 456 DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPD-KRCY 514
D+HR FAP+C+ CG I P G EETVR+V++D+ FH+ CY CE+CGL L+ E + + CY
Sbjct: 394 DFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIGCYKCEECGLLLSSEGECQGCY 453
Query: 515 PLQGRLMCRAC 525
PL G ++C+AC
Sbjct: 454 PLDGHILCKAC 464
Score = 182 (69.1 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 56/204 (27%), Positives = 83/204 (40%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G A+ ++H CF+C +C LRG+ FY V R YCE Y+
Sbjct: 279 YFGRCGGCGEDVVGDGAGVVALDRVFHIGCFVCSTCRAQLRGQHFYAVERRAYCESCYV- 337
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCF 429
T EKC+ C I++ M + C +C H ++ I + + C
Sbjct: 338 ----ATLEKCSTCSEPILDRILRAMGKAYHPGCFTCVVC-HRGLDGIPFTVDATSQIHCI 392
Query: 430 ---------RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
RC +C + P + + +H + KC CG ++ EG E
Sbjct: 393 EDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFH-IGCYKCEECGLLLSS-EG--E 448
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQ 504
+D H+ C C +Q
Sbjct: 449 CQGCYPLDG--HILCKACSAWRIQ 470
Score = 45 (20.9 bits), Expect = 9.6e-44, Sum P(2) = 9.6e-44
Identities = 17/68 (25%), Positives = 25/68 (36%)
Query: 177 DYPPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPV 236
D +EAPP + KP P+ H +P Y+ A+T A PV
Sbjct: 119 DRQAFEAPPPHAYRGGSLKPSGGAVPTPMLPASH----YGGPTPASYATASTPAGPAFPV 174
Query: 237 KTATSLSV 244
+ + V
Sbjct: 175 QVKVAQPV 182
Score = 38 (18.4 bits), Expect = 5.2e-43, Sum P(2) = 5.2e-43
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 197 PKPGPQVPVFG-GE 209
P PGP P+ G GE
Sbjct: 198 PLPGPHFPLTGRGE 211
>UNIPROTKB|I3LCI1 [details] [associations]
symbol:TRIP6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045323 "interleukin-1 receptor complex" evidence=IEA]
[GO:0030335 "positive regulation of cell migration" evidence=IEA]
[GO:0019900 "kinase binding" evidence=IEA] [GO:0008588 "release of
cytoplasmic sequestered NF-kappaB" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0005149 "interleukin-1 receptor
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:2.10.110.10 GO:GO:0030335 GeneTree:ENSGT00610000085810
GO:GO:0008588 GO:GO:0045323 KO:K12792 OMA:HREPGPG EMBL:FP326674
RefSeq:XP_003354526.1 Ensembl:ENSSSCT00000028933 GeneID:100620791
KEGG:ssc:100620791 Uniprot:I3LCI1
Length = 481
Score = 434 (157.8 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 70/131 (53%), Positives = 97/131 (74%)
Query: 396 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVN 455
S + T EKC+ C I++ IL+AMGK+YHPGCF C +C+ LDG+PFTVD ++I+C+
Sbjct: 335 SCYVATLEKCSTCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIE 394
Query: 456 DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPD-KRCY 514
D+HR FAP+C+ CG I P G EETVR+V++D+ FHV CY CE+CGL L+ E + + CY
Sbjct: 395 DFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHVGCYKCEECGLLLSSEGECQGCY 454
Query: 515 PLQGRLMCRAC 525
PL G ++C+AC
Sbjct: 455 PLDGHILCKAC 465
Score = 182 (69.1 bits), Expect = 1.7e-10, Sum P(2) = 1.7e-10
Identities = 56/204 (27%), Positives = 83/204 (40%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G A+ ++H CF+C +C LRG+ FY V R YCE Y+
Sbjct: 280 YFGRCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAHLRGQHFYAVERRAYCESCYV- 338
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCF 429
T EKC+ C I++ M + C +C H ++ I + + C
Sbjct: 339 ----ATLEKCSTCSQPILDRILRAMGKAYHPGCFTCVVC-HRGLDGIPFTVDATSQIHCI 393
Query: 430 ---------RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
RC +C + P + + +H + KC CG ++ EG E
Sbjct: 394 EDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFH-VGCYKCEECGLLLSS-EG--E 449
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQ 504
+D H+ C C +Q
Sbjct: 450 CQGCYPLDG--HILCKACSAWRIQ 471
Score = 38 (18.4 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 20/80 (25%), Positives = 29/80 (36%)
Query: 166 PQVPQGLKYI-RDYPPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYS 224
P+ P Y P Y + P + PP P P +GG +P Y+
Sbjct: 115 PRRPDRQAYEPHQLPAYRSGPGSLKPNGGSVPPTPLPAAS-YGGP---------TPASYA 164
Query: 225 RANTVTSKAVPVKTATSLSV 244
A+T A PV+ + V
Sbjct: 165 TASTPAGPAFPVQVKVAQPV 184
>UNIPROTKB|Q3SX26 [details] [associations]
symbol:TRIP6 "Thyroid receptor-interacting protein 6"
species:9913 "Bos taurus" [GO:0045323 "interleukin-1 receptor
complex" evidence=ISS] [GO:0030335 "positive regulation of cell
migration" evidence=ISS] [GO:0019900 "kinase binding" evidence=ISS]
[GO:0008588 "release of cytoplasmic sequestered NF-kappaB"
evidence=ISS] [GO:0005925 "focal adhesion" evidence=ISS]
[GO:0005149 "interleukin-1 receptor binding" evidence=ISS]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007155 "cell
adhesion" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0005737
GO:GO:0006355 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0007155 GO:GO:0006351 GO:GO:0005925 GO:GO:0019900
Gene3D:2.10.110.10 GO:GO:0030335 GeneTree:ENSGT00610000085810
GO:GO:0008588 GO:GO:0005149 GO:GO:0045323 eggNOG:NOG279196
HOGENOM:HOG000220910 HOVERGEN:HBG093602 EMBL:BC104544
IPI:IPI00716854 RefSeq:NP_001030546.1 UniGene:Bt.35776
ProteinModelPortal:Q3SX26 SMR:Q3SX26 STRING:Q3SX26 PRIDE:Q3SX26
Ensembl:ENSBTAT00000001503 GeneID:615869 KEGG:bta:615869 CTD:7205
InParanoid:Q3SX26 KO:K12792 OMA:HREPGPG OrthoDB:EOG44J2J8
NextBio:20899836 Uniprot:Q3SX26
Length = 481
Score = 429 (156.1 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 68/131 (51%), Positives = 96/131 (73%)
Query: 396 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVN 455
S + T EKC+ C I++ IL+AMGK+YHPGCF C +C+ LDG+PFTVD ++I+C+
Sbjct: 335 SCYVATLEKCSTCSQPILDRILRAMGKAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIE 394
Query: 456 DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPD-KRCY 514
D+HR FAP+C+ CG I P G EETVR+V++D+ FH+ CY CE+CGL L+ E + + CY
Sbjct: 395 DFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIGCYKCEECGLLLSSEGECQGCY 454
Query: 515 PLQGRLMCRAC 525
PL G ++C+ C
Sbjct: 455 PLDGHILCKTC 465
Score = 183 (69.5 bits), Expect = 6.3e-11, Sum P(2) = 6.3e-11
Identities = 56/204 (27%), Positives = 83/204 (40%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G A+ ++H CF+C +C LRG+ FY V R YCE Y+
Sbjct: 280 YFGRCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCESCYV- 338
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCF 429
T EKC+ C I++ M + C +C H ++ I + + C
Sbjct: 339 ----ATLEKCSTCSQPILDRILRAMGKAYHPGCFTCVVC-HRGLDGIPFTVDATSQIHCI 393
Query: 430 ---------RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
RC +C + P + + +H + KC CG ++ EG E
Sbjct: 394 EDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFH-IGCYKCEECGLLLSS-EG--E 449
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQ 504
+D H+ C C +Q
Sbjct: 450 CQGCYPLDG--HILCKTCSAWRIQ 471
Score = 41 (19.5 bits), Expect = 6.7e-43, Sum P(2) = 6.7e-43
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 178 YPPYEAPPVYENIQELNKPPKPG-PQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPV 236
Y P E PP Y + +P P P+ G + +P Y+ A+T A PV
Sbjct: 123 YEPPE-PPAYRSGSGPLRPNGGALPPPPLPGSPY-----GAPTPASYATASTPAGPAFPV 176
Query: 237 KTATSLSV 244
+ + V
Sbjct: 177 QVKVARPV 184
Score = 38 (18.4 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 8/14 (57%), Positives = 9/14 (64%)
Query: 197 PKPGPQVPVFG-GE 209
P PGP P+ G GE
Sbjct: 200 PSPGPHFPLPGRGE 213
>ZFIN|ZDB-GENE-040426-918 [details] [associations]
symbol:lpp "LIM domain containing preferred
translocation partner in lipoma" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0060027
"convergent extension involved in gastrulation" evidence=IGI;IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0060030 "dorsal
convergence" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-040426-918 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0060030 CTD:4026 HOVERGEN:HBG093602
KO:K16676 OMA:NDSDPAY EMBL:BC050503 IPI:IPI00488379
RefSeq:NP_957492.1 UniGene:Dr.132470 UniGene:Dr.78715
ProteinModelPortal:Q7ZU85 SMR:Q7ZU85 STRING:Q7ZU85 PRIDE:Q7ZU85
GeneID:573024 KEGG:dre:573024 InParanoid:Q7ZU85 NextBio:20891031
ArrayExpress:Q7ZU85 Bgee:Q7ZU85 Uniprot:Q7ZU85
Length = 556
Score = 428 (155.7 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 71/141 (50%), Positives = 98/141 (69%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
T E C IC IME IL+A GK+YHP CF C +C+ LDG+PFTVD N I+C+ D+H+
Sbjct: 416 TLETCNICYKPIMERILRATGKAYHPQCFTCVVCHRSLDGIPFTVDASNHIHCIEDFHKK 475
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
FAP+C+ C + I P G EETVR+V++D+DFHV CY CEDCG L++ ++ CYPL G +
Sbjct: 476 FAPRCSVCNEPIMPAPGQEETVRIVALDRDFHVQCYRCEDCGCLLSEGDNQGCYPLDGHV 535
Query: 521 MCRACHLSHLSR-HHQSPTDL 540
+C+ C+ S + ++ TDL
Sbjct: 536 LCKNCNTSRIQALTAKATTDL 556
Score = 240 (89.5 bits), Expect = 5.2e-17, Sum P(2) = 5.2e-17
Identities = 66/204 (32%), Positives = 91/204 (44%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C +CGE V G G C AM ++H +CFIC +CG LRGK FY V + YCE Y+
Sbjct: 356 YFGRCSSCGENVVGEGTGCTAMDQVFHVDCFICMTCGSKLRGKPFYAVEKKAYCEPCYI- 414
Query: 375 SGFQQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMILQAMGKSYHPGCF 429
T E C IC IME +G + C +C H ++ I + S H C
Sbjct: 415 ----NTLETCNICYKPIMERILRATGKAYHPQCFTCVVC-HRSLDGIPFTVDASNHIHCI 469
Query: 430 ---------RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
RC +CNE + P + + D+H + +C CG ++ EG +
Sbjct: 470 EDFHKKFAPRCSVCNEPIMPAPGQEETVRIVALDRDFH-VQCYRCEDCGCLLS--EGDNQ 526
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQ 504
+ D HV C C +Q
Sbjct: 527 GCYPL----DGHVLCKNCNTSRIQ 546
Score = 39 (18.8 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 7/12 (58%), Positives = 7/12 (58%)
Query: 277 PYNVTPPRPMGP 288
P NVTPP P
Sbjct: 180 PQNVTPPASSSP 191
>UNIPROTKB|E2RPC5 [details] [associations]
symbol:TRIP6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 OMA:HREPGPG EMBL:AAEX03004267
Ensembl:ENSCAFT00000022289 Uniprot:E2RPC5
Length = 484
Score = 427 (155.4 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 68/131 (51%), Positives = 96/131 (73%)
Query: 396 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVN 455
S + T EKC+ C I++ IL+AMGK+YHP CF C +C+ LDG+PFTVD ++I+C+
Sbjct: 338 SCYVATLEKCSTCSQPILDRILRAMGKAYHPSCFTCVVCHRGLDGIPFTVDATSQIHCIE 397
Query: 456 DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPD-KRCY 514
D+HR FAP+C+ CG I P G EETVR+V++D+ FH+ CY CE+CGL L+ E + + CY
Sbjct: 398 DFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFHIGCYKCEECGLLLSSEGECQGCY 457
Query: 515 PLQGRLMCRAC 525
PL G ++C+AC
Sbjct: 458 PLDGHILCKAC 468
Score = 186 (70.5 bits), Expect = 7.7e-11, Sum P(2) = 7.7e-11
Identities = 56/204 (27%), Positives = 84/204 (41%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G A+ ++H CF+C +C LRG+ FY V R YCE Y+
Sbjct: 283 YFGRCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCESCYV- 341
Query: 375 SGFQQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCF 429
T EKC+ C I++ M + + C +C H ++ I + + C
Sbjct: 342 ----ATLEKCSTCSQPILDRILRAMGKAYHPSCFTCVVC-HRGLDGIPFTVDATSQIHCI 396
Query: 430 ---------RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
RC +C + P + + +H + KC CG ++ EG E
Sbjct: 397 EDFHRKFAPRCSVCGGAIMPEPGQEETVRIVALDRSFH-IGCYKCEECGLLLSS-EG--E 452
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQ 504
+D H+ C C +Q
Sbjct: 453 CQGCYPLDG--HILCKACSAWRIQ 474
Score = 37 (18.1 bits), Expect = 2.8e-42, Sum P(2) = 2.8e-42
Identities = 18/69 (26%), Positives = 27/69 (39%)
Query: 177 DYPPYEAPPVYENIQELNKPPKP-GPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVP 235
D YE PP + + KP G VP+ + +P Y+ A+T A P
Sbjct: 119 DRQAYE-PPQPHAYRTGSGSLKPNGGGVPIPPQQLSASPYGGPTPASYATASTPAGPAFP 177
Query: 236 VKTATSLSV 244
V+ + V
Sbjct: 178 VQVKVAQPV 186
>UNIPROTKB|F1LSB9 [details] [associations]
symbol:Lpp "Lipoma-preferred partner homolog" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00610000085810
OMA:NDSDPAY IPI:IPI00559131 Ensembl:ENSRNOT00000044279
ArrayExpress:F1LSB9 Uniprot:F1LSB9
Length = 633
Score = 418 (152.2 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 65/130 (50%), Positives = 95/130 (73%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
T E+C++C IME IL+A GK+YHP CF C +C+ LDG+PFTVD I+C+ D+H+
Sbjct: 493 TLEQCSVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDACGLIHCIEDFHKK 552
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
FAP+C+ C + I P G EETVR+V++D+DFHV CY CEDCG L++ ++ CYPL G +
Sbjct: 553 FAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHI 612
Query: 521 MCRACHLSHL 530
+C++C+ + +
Sbjct: 613 LCKSCNSARI 622
Score = 212 (79.7 bits), Expect = 1.4e-14, Sum P(2) = 1.4e-14
Identities = 60/205 (29%), Positives = 91/205 (44%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G C AM ++H +CF C C LRG+ FY V + YCE Y+
Sbjct: 433 YFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCMVCDIKLRGQPFYAVEKKAYCEPCYI- 491
Query: 375 SGFQQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMI---LQAMG----- 421
T E+C++C IME +G + C +C H ++ I + A G
Sbjct: 492 ----NTLEQCSVCSKPIMERILRATGKAYHPHCFTCVMC-HRSLDGIPFTVDACGLIHCI 546
Query: 422 KSYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
+ +H RC +C E + P + + D+H + +C CG G+ EG +
Sbjct: 547 EDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFH-VHCYRCEDCG-GLLS-EGDNQ 603
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQL 505
+ D H+ C C +++
Sbjct: 604 GCYPL----DGHILCKSCNSARIRV 624
Score = 49 (22.3 bits), Expect = 5.3e-42, Sum P(2) = 5.3e-42
Identities = 18/72 (25%), Positives = 31/72 (43%)
Query: 180 PYE--APPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVK 237
PY+ APP + + PP PV G H++M I P ++ + +A+P+
Sbjct: 138 PYKPRAPP--GSSSSIASPPV---STPVTG--HKRMVIPQQPPLTATKKSATKPQAIPIP 190
Query: 238 TATSLSVTPNYQ 249
++ P Q
Sbjct: 191 VTPIGTLKPQPQ 202
>UNIPROTKB|A5H447 [details] [associations]
symbol:zyx "Zyxin" species:8355 "Xenopus laevis"
[GO:0001725 "stress fiber" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005925 "focal adhesion" evidence=ISS]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=IPI] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0007155 GO:GO:0006357 GO:GO:0006351
GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0001725 KO:K06273
EMBL:EF051627 RefSeq:NP_001092151.1 UniGene:Xl.76157
ProteinModelPortal:A5H447 IntAct:A5H447 GeneID:100049724
KEGG:xla:100049724 Xenbase:XB-GENE-6253946 HOVERGEN:HBG108781
Uniprot:A5H447
Length = 663
Score = 406 (148.0 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 70/131 (53%), Positives = 91/131 (69%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKI-YCVND 456
+Q T E CA+C I E +L+A+GKSYHP CF C +C L G PF VD DNK+ +CVND
Sbjct: 525 YQDTLECCAVCDKKITERLLKAIGKSYHPSCFTCAVCKCSLQGEPFIVD-DNKLPHCVND 583
Query: 457 YHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYP 515
YHR +AP+C CG I P G +ETVRVV+++K+FH+ CY CEDCG L+ E D C+P
Sbjct: 584 YHRRYAPRCCVCGDPIAPEPGRDETVRVVALEKNFHMMCYKCEDCGCPLSIEADDAGCFP 643
Query: 516 LQGRLMCRACH 526
L G ++C+ CH
Sbjct: 644 LDGHVLCKKCH 654
Score = 161 (61.7 bits), Expect = 1.4e-07, Sum P(3) = 1.4e-07
Identities = 50/194 (25%), Positives = 79/194 (40%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C CG ++ +A +LYH CF C C + L+G+ +Y G+ C+E Y
Sbjct: 471 LCGFCGRGLSRTETVVRAGEHLYHVACFTCSRCDQQLQGQQYYESAGKPLCDECY----- 525
Query: 378 QQTAEKCAICGHLIMEMY-----SGFQQTAEKCAIC-----GH--LIMEMILQAMGKSYH 425
Q T E CA+C I E + + CA+C G ++ + L YH
Sbjct: 526 QDTLECCAVCDKKITERLLKAIGKSYHPSCFTCAVCKCSLQGEPFIVDDNKLPHCVNDYH 585
Query: 426 PGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RCC+C + + P + + ++H M KC CG ++ +E +
Sbjct: 586 RRYAPRCCVCGDPIAPEPGRDETVRVVALEKNFH-MMCYKCEDCGCPLS-IEADDAGC-- 641
Query: 485 VSMDKDFHVDCYMC 498
D HV C C
Sbjct: 642 --FPLDGHVLCKKC 653
Score = 39 (18.8 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 277 PYNVTPPRPMGPTEAER 293
P PP+P P EA +
Sbjct: 173 PPAAPPPKPSAPCEAPK 189
Score = 37 (18.1 bits), Expect = 1.7e-41, Sum P(3) = 1.7e-41
Identities = 9/30 (30%), Positives = 14/30 (46%)
Query: 175 IRDYPPYEAPPVYENIQELNKPPKPGPQVP 204
I ++ P PP+ E + + P P P P
Sbjct: 138 IEEFFP-SPPPLEECVSDTQDLPVPVPPPP 166
Score = 37 (18.1 bits), Expect = 5.0e-39, Sum P(2) = 5.0e-39
Identities = 12/43 (27%), Positives = 14/43 (32%)
Query: 165 QPQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQVPVFG 207
+P P PP EA + K P P VP G
Sbjct: 290 KPSAPVTYPQKTTEPPAEASQSSPKVTPAAKHEAPPPTVPSGG 332
>UNIPROTKB|B4DQR8 [details] [associations]
symbol:ZYX "cDNA FLJ53160, highly similar to Zyxin"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005925
"focal adhesion" evidence=IDA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS50023 SMART:SM00132 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10 EMBL:AC092214
HOGENOM:HOG000220910 HOVERGEN:HBG093602 UniGene:Hs.490415
HGNC:HGNC:13200 ChiTaRS:ZYX EMBL:AK298925 IPI:IPI00871311
SMR:B4DQR8 STRING:B4DQR8 Ensembl:ENST00000449423 Uniprot:B4DQR8
Length = 485
Score = 384 (140.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 64/130 (49%), Positives = 87/130 (66%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ T EKC CG I + +L+A GK+YHP CF C +C L+G F VD N+ +CV DY
Sbjct: 350 YTDTLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDY 409
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
H+ +AP+C+ C + I P G +ETVRVV++DK+FH+ CY CEDCG L+ E D C+PL
Sbjct: 410 HKQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPL 469
Query: 517 QGRLMCRACH 526
G ++CR CH
Sbjct: 470 DGHVLCRKCH 479
Score = 171 (65.3 bits), Expect = 4.8e-10, Sum P(3) = 4.8e-10
Identities = 53/200 (26%), Positives = 82/200 (41%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + + A A +A+G L+H CF C C + L+G+ FY++ G YCE Y
Sbjct: 296 LCGRCHQPLARAQPAVRALGQLFHIACFTCHQCAQQLQGQQFYSLEGAPYCEGCYT---- 351
Query: 378 QQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLI--MEMILQAMGK-----SYH 425
T EKC CG I + +G + C +C + I+ + YH
Sbjct: 352 -DTLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDYH 410
Query: 426 PGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RC +C+E + P + + ++H M KC CGK ++ +E +
Sbjct: 411 KQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFH-MKCYKCEDCGKPLS-IEADDNGC-- 466
Query: 485 VSMDKDFHVDCYMCEDCGLQ 504
D HV C C Q
Sbjct: 467 --FPLDGHVLCRKCHTARAQ 484
Score = 44 (20.5 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 21/72 (29%), Positives = 30/72 (41%)
Query: 179 PPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQ-MAIALTSP---PVYSRA-----NTV 229
P AP + + P+P PQV + Q +++A T P P S A + V
Sbjct: 123 PQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQTQPVSLANTQPRGPPASSPAPAPKFSPV 182
Query: 230 TSKAVPVKTATS 241
T K PV + S
Sbjct: 183 TPKFTPVASKFS 194
Score = 43 (20.2 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 181 YEAPPVYENIQELNKPPKPGP 201
+ PP +N ++ P PGP
Sbjct: 243 HPVPPPAQNQNQVRSPGAPGP 263
Score = 39 (18.8 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 27 EGTSRAPAPPP 37
EG AP PPP
Sbjct: 68 EGGPEAPIPPP 78
>UNIPROTKB|H0Y2Y8 [details] [associations]
symbol:ZYX "Zyxin" species:9606 "Homo sapiens" [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS50023 SMART:SM00132
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:2.10.110.10 EMBL:AC092214 HGNC:HGNC:13200 ChiTaRS:ZYX
ProteinModelPortal:H0Y2Y8 PRIDE:H0Y2Y8 Ensembl:ENST00000354434
Bgee:H0Y2Y8 Uniprot:H0Y2Y8
Length = 540
Score = 384 (140.2 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 64/130 (49%), Positives = 87/130 (66%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ T EKC CG I + +L+A GK+YHP CF C +C L+G F VD N+ +CV DY
Sbjct: 405 YTDTLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDY 464
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
H+ +AP+C+ C + I P G +ETVRVV++DK+FH+ CY CEDCG L+ E D C+PL
Sbjct: 465 HKQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPL 524
Query: 517 QGRLMCRACH 526
G ++CR CH
Sbjct: 525 DGHVLCRKCH 534
Score = 171 (65.3 bits), Expect = 8.4e-10, Sum P(3) = 8.4e-10
Identities = 53/200 (26%), Positives = 82/200 (41%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + + A A +A+G L+H CF C C + L+G+ FY++ G YCE Y
Sbjct: 351 LCGRCHQPLARAQPAVRALGQLFHIACFTCHQCAQQLQGQQFYSLEGAPYCEGCYT---- 406
Query: 378 QQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLI--MEMILQAMGK-----SYH 425
T EKC CG I + +G + C +C + I+ + YH
Sbjct: 407 -DTLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDYH 465
Query: 426 PGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RC +C+E + P + + ++H M KC CGK ++ +E +
Sbjct: 466 KQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFH-MKCYKCEDCGKPLS-IEADDNGC-- 521
Query: 485 VSMDKDFHVDCYMCEDCGLQ 504
D HV C C Q
Sbjct: 522 --FPLDGHVLCRKCHTARAQ 539
Score = 44 (20.5 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 21/72 (29%), Positives = 30/72 (41%)
Query: 179 PPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQ-MAIALTSP---PVYSRA-----NTV 229
P AP + + P+P PQV + Q +++A T P P S A + V
Sbjct: 178 PQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQTQPVSLANTQPRGPPASSPAPAPKFSPV 237
Query: 230 TSKAVPVKTATS 241
T K PV + S
Sbjct: 238 TPKFTPVASKFS 249
Score = 43 (20.2 bits), Expect = 2.3e-41, Sum P(3) = 2.3e-41
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 181 YEAPPVYENIQELNKPPKPGP 201
+ PP +N ++ P PGP
Sbjct: 298 HPVPPPAQNQNQVRSPGAPGP 318
Score = 39 (18.8 bits), Expect = 1.8e-41, Sum P(3) = 1.8e-41
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 27 EGTSRAPAPPP 37
EG AP PPP
Sbjct: 123 EGGPEAPIPPP 133
>UNIPROTKB|E2RSJ3 [details] [associations]
symbol:LPP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 CTD:4026 KO:K16676 OMA:NDSDPAY
EMBL:AAEX03017305 RefSeq:XP_535840.3 Ensembl:ENSCAFT00000022083
GeneID:478670 KEGG:cfa:478670 Uniprot:E2RSJ3
Length = 614
Score = 419 (152.6 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 65/130 (50%), Positives = 94/130 (72%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
T E+C++C IME IL+A GK+YHP CF C +C+ LDG+PFTVD I+C+ D+H+
Sbjct: 474 TLEQCSVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKK 533
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
FAP+C+ C + I P G EETVR+V++D+DFHV CY CEDCG L++ ++ CYPL G +
Sbjct: 534 FAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHI 593
Query: 521 MCRACHLSHL 530
+C+ C+ + +
Sbjct: 594 LCKTCNSARI 603
Score = 214 (80.4 bits), Expect = 7.9e-14, Sum P(2) = 7.9e-14
Identities = 60/205 (29%), Positives = 91/205 (44%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G C AM ++H +CF C C LRG+ FY V + YCE Y+
Sbjct: 414 YFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYI- 472
Query: 375 SGFQQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMI---LQAMG----- 421
T E+C++C IME +G + C +C H ++ I + A G
Sbjct: 473 ----NTLEQCSVCSKPIMERILRATGKAYHPHCFTCVMC-HRSLDGIPFTVDAGGLIHCI 527
Query: 422 KSYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
+ +H RC +C E + P + + D+H + +C CG G+ EG +
Sbjct: 528 EDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFH-VHCYRCEDCG-GLLS-EGDNQ 584
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQL 505
+ D H+ C C +++
Sbjct: 585 GCYPL----DGHILCKTCNSARIRV 605
Score = 39 (18.8 bits), Expect = 2.3e-41, Sum P(2) = 2.3e-41
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 27 EGTSRAPAPPPVD 39
EG P PPP+D
Sbjct: 64 EGDFLPPPPPPLD 76
>MGI|MGI:2441849 [details] [associations]
symbol:Lpp "LIM domain containing preferred translocation
partner in lipoma" species:10090 "Mus musculus" [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:2441849
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0007155 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 CTD:4026 eggNOG:NOG279196
HOVERGEN:HBG093602 KO:K16676 OMA:NDSDPAY OrthoDB:EOG4XKV6J
ChiTaRS:LPP EMBL:AK029335 EMBL:AK029567 EMBL:AK040643 EMBL:AK045288
EMBL:AK045341 EMBL:AK051345 EMBL:AK051937 EMBL:AK054550
EMBL:AK076989 EMBL:AK169780 EMBL:BC085321 IPI:IPI00221494
IPI:IPI00656172 IPI:IPI00656185 IPI:IPI00656290 IPI:IPI00656313
RefSeq:NP_001139424.1 RefSeq:NP_001139426.1 RefSeq:NP_848780.3
UniGene:Mm.209385 UniGene:Mm.450045 ProteinModelPortal:Q8BFW7
SMR:Q8BFW7 IntAct:Q8BFW7 MINT:MINT-4111189 STRING:Q8BFW7
PhosphoSite:Q8BFW7 PaxDb:Q8BFW7 PRIDE:Q8BFW7
Ensembl:ENSMUST00000038053 Ensembl:ENSMUST00000078988
Ensembl:ENSMUST00000115314 GeneID:210126 KEGG:mmu:210126
UCSC:uc007yub.2 UCSC:uc007yuc.2 UCSC:uc007yud.2 UCSC:uc007yue.2
UCSC:uc007yuh.2 InParanoid:Q8BFW7 NextBio:372874 Bgee:Q8BFW7
Genevestigator:Q8BFW7 Uniprot:Q8BFW7
Length = 613
Score = 417 (151.9 bits), Expect = 3.9e-41, Sum P(2) = 3.9e-41
Identities = 65/130 (50%), Positives = 94/130 (72%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
T E+C++C IME IL+A GK+YHP CF C +C+ LDG+PFTVD I+C+ D+H+
Sbjct: 473 TLEQCSVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDACGLIHCIEDFHKK 532
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
FAP+C+ C + I P G EETVR+V++D+DFHV CY CEDCG L++ ++ CYPL G +
Sbjct: 533 FAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHI 592
Query: 521 MCRACHLSHL 530
+C+ C+ + +
Sbjct: 593 LCKTCNSARI 602
Score = 212 (79.7 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 60/205 (29%), Positives = 91/205 (44%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G C AM ++H +CF C C LRG+ FY V + YCE Y+
Sbjct: 413 YFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCIVCDVKLRGQPFYAVEKKAYCEPCYI- 471
Query: 375 SGFQQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMI---LQAMG----- 421
T E+C++C IME +G + C +C H ++ I + A G
Sbjct: 472 ----NTLEQCSVCSKPIMERILRATGKAYHPHCFTCVMC-HRSLDGIPFTVDACGLIHCI 526
Query: 422 KSYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
+ +H RC +C E + P + + D+H + +C CG G+ EG +
Sbjct: 527 EDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFH-VHCYRCEDCG-GLLS-EGDNQ 583
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQL 505
+ D H+ C C +++
Sbjct: 584 GCYPL----DGHILCKTCNSARIRV 604
Score = 39 (18.8 bits), Expect = 3.9e-41, Sum P(2) = 3.9e-41
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 28 GTSRAPAPPPVDYKQY--ERGN 47
G P PPP+D + ++GN
Sbjct: 84 GPGHFPPPPPLDEGAFKVQQGN 105
>UNIPROTKB|Q93052 [details] [associations]
symbol:LPP "Lipoma-preferred partner" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0007155
"cell adhesion" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008150 "biological_process"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005925
"focal adhesion" evidence=IDA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 EMBL:CH471052
GO:GO:0008270 GO:GO:0007155 GO:GO:0005925 Gene3D:2.10.110.10
CTD:4026 eggNOG:NOG279196 HOGENOM:HOG000220910 HOVERGEN:HBG093602
KO:K16676 OMA:NDSDPAY OrthoDB:EOG4XKV6J EMBL:U49957 EMBL:U49968
EMBL:U49960 EMBL:U49961 EMBL:U49962 EMBL:U49963 EMBL:U49964
EMBL:U49965 EMBL:U49966 EMBL:U49967 EMBL:CR457074 EMBL:BC130584
EMBL:AF393503 IPI:IPI00023704 RefSeq:NP_001161143.1
RefSeq:NP_005569.1 UniGene:Hs.741183 ProteinModelPortal:Q93052
SMR:Q93052 IntAct:Q93052 MINT:MINT-5005514 STRING:Q93052
PhosphoSite:Q93052 DMDM:74751663 PaxDb:Q93052 PeptideAtlas:Q93052
PRIDE:Q93052 Ensembl:ENST00000312675 Ensembl:ENST00000543006
GeneID:4026 KEGG:hsa:4026 UCSC:uc003frs.2 GeneCards:GC03P187871
HGNC:HGNC:6679 HPA:HPA011133 HPA:HPA017342 MIM:600700
neXtProt:NX_Q93052 PharmGKB:PA30440 InParanoid:Q93052
PhylomeDB:Q93052 ChiTaRS:LPP GenomeRNAi:4026 NextBio:15786
ArrayExpress:Q93052 Bgee:Q93052 CleanEx:HS_LPP
Genevestigator:Q93052 Uniprot:Q93052
Length = 612
Score = 416 (151.5 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 65/130 (50%), Positives = 93/130 (71%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
T E+C +C IME IL+A GK+YHP CF C +C+ LDG+PFTVD I+C+ D+H+
Sbjct: 472 TLEQCNVCSKPIMERILRATGKAYHPHCFTCVMCHRSLDGIPFTVDAGGLIHCIEDFHKK 531
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
FAP+C+ C + I P G EETVR+V++D+DFHV CY CEDCG L++ ++ CYPL G +
Sbjct: 532 FAPRCSVCKEPIMPAPGQEETVRIVALDRDFHVHCYRCEDCGGLLSEGDNQGCYPLDGHI 591
Query: 521 MCRACHLSHL 530
+C+ C+ + +
Sbjct: 592 LCKTCNSARI 601
Score = 211 (79.3 bits), Expect = 1.3e-13, Sum P(2) = 1.3e-13
Identities = 60/205 (29%), Positives = 90/205 (43%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G C AM ++H +CF C C LRG+ FY V + YCE Y+
Sbjct: 412 YFGRCARCGENVVGEGTGCTAMDQVFHVDCFTCIICNNKLRGQPFYAVEKKAYCEPCYI- 470
Query: 375 SGFQQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMI---LQAMG----- 421
T E+C +C IME +G + C +C H ++ I + A G
Sbjct: 471 ----NTLEQCNVCSKPIMERILRATGKAYHPHCFTCVMC-HRSLDGIPFTVDAGGLIHCI 525
Query: 422 KSYHPGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
+ +H RC +C E + P + + D+H + +C CG G+ EG +
Sbjct: 526 EDFHKKFAPRCSVCKEPIMPAPGQEETVRIVALDRDFH-VHCYRCEDCG-GLLS-EGDNQ 582
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQL 505
+ D H+ C C +++
Sbjct: 583 GCYPL----DGHILCKTCNSARIRV 603
Score = 40 (19.1 bits), Expect = 4.1e-41, Sum P(2) = 4.1e-41
Identities = 7/16 (43%), Positives = 12/16 (75%)
Query: 33 PAPPPVDYKQYE-RGN 47
P PPP+D + ++ +GN
Sbjct: 89 PPPPPLDEEAFKVQGN 104
Score = 39 (18.8 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 7/13 (53%), Positives = 8/13 (61%)
Query: 27 EGTSRAPAPPPVD 39
EG P PPP+D
Sbjct: 64 EGDFLPPPPPPLD 76
Score = 39 (18.8 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 14/48 (29%), Positives = 23/48 (47%)
Query: 17 PV-GAIESFLVEGTSRAPAPPPVDYKQYERGNIIASSKFATPKSVDNL 63
PV G ++++ + S AP PP+ K G + SS + + D L
Sbjct: 347 PVTGPKKTYITDPVS-APCAPPLQPKGGHSGQLGPSSVAPSFRPEDEL 393
>UNIPROTKB|Q15942 [details] [associations]
symbol:ZYX "Zyxin" species:9606 "Homo sapiens" [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0019048 "virus-host interaction" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0001725 "stress fiber"
evidence=IDA] [GO:0005925 "focal adhesion" evidence=IDA]
[GO:0005887 "integral to plasma membrane" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0007267 "cell-cell
signaling" evidence=TAS] [GO:0005913 "cell-cell adherens junction"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0005737
GO:GO:0019048 GO:GO:0007165 GO:GO:0005887 GO:GO:0046872
GO:GO:0008270 GO:GO:0007155 GO:GO:0007267 GO:GO:0005925
GO:GO:0005913 Gene3D:2.10.110.10 GO:GO:0001725 EMBL:CH236959
EMBL:AC092214 eggNOG:NOG279196 HOGENOM:HOG000220910
HOVERGEN:HBG093602 CTD:7791 KO:K06273 OrthoDB:EOG4MSCZN EMBL:X94991
EMBL:X95735 EMBL:CR457431 EMBL:BC008743 EMBL:BC009360 EMBL:BC010031
IPI:IPI00926625 PIR:G02845 RefSeq:NP_001010972.1 RefSeq:NP_003452.1
UniGene:Hs.490415 ProteinModelPortal:Q15942 SMR:Q15942
IntAct:Q15942 MINT:MINT-220515 STRING:Q15942 PhosphoSite:Q15942
DMDM:2497677 OGP:Q15942 PaxDb:Q15942 PRIDE:Q15942 DNASU:7791
Ensembl:ENST00000322764 GeneID:7791 KEGG:hsa:7791 UCSC:uc003wcw.3
GeneCards:GC07P143078 HGNC:HGNC:13200 HPA:CAB009321 HPA:HPA004835
MIM:602002 neXtProt:NX_Q15942 PharmGKB:PA37765 InParanoid:Q15942
OMA:DNGCFPL ChiTaRS:ZYX GenomeRNAi:7791 NextBio:30155
PMAP-CutDB:Q15942 ArrayExpress:Q15942 Bgee:Q15942 CleanEx:HS_ZYX
Genevestigator:Q15942 GermOnline:ENSG00000159840 Uniprot:Q15942
Length = 572
Score = 384 (140.2 bits), Expect = 6.3e-41, Sum P(3) = 6.3e-41
Identities = 64/130 (49%), Positives = 87/130 (66%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ T EKC CG I + +L+A GK+YHP CF C +C L+G F VD N+ +CV DY
Sbjct: 437 YTDTLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDY 496
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
H+ +AP+C+ C + I P G +ETVRVV++DK+FH+ CY CEDCG L+ E D C+PL
Sbjct: 497 HKQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPL 556
Query: 517 QGRLMCRACH 526
G ++CR CH
Sbjct: 557 DGHVLCRKCH 566
Score = 171 (65.3 bits), Expect = 1.1e-09, Sum P(3) = 1.1e-09
Identities = 53/200 (26%), Positives = 82/200 (41%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + + A A +A+G L+H CF C C + L+G+ FY++ G YCE Y
Sbjct: 383 LCGRCHQPLARAQPAVRALGQLFHIACFTCHQCAQQLQGQQFYSLEGAPYCEGCYT---- 438
Query: 378 QQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLI--MEMILQAMGK-----SYH 425
T EKC CG I + +G + C +C + I+ + YH
Sbjct: 439 -DTLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDYH 497
Query: 426 PGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RC +C+E + P + + ++H M KC CGK ++ +E +
Sbjct: 498 KQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFH-MKCYKCEDCGKPLS-IEADDNGC-- 553
Query: 485 VSMDKDFHVDCYMCEDCGLQ 504
D HV C C Q
Sbjct: 554 --FPLDGHVLCRKCHTARAQ 571
Score = 44 (20.5 bits), Expect = 6.3e-41, Sum P(3) = 6.3e-41
Identities = 21/72 (29%), Positives = 30/72 (41%)
Query: 179 PPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQ-MAIALTSP---PVYSRA-----NTV 229
P AP + + P+P PQV + Q +++A T P P S A + V
Sbjct: 210 PQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQTQPVSLANTQPRGPPASSPAPAPKFSPV 269
Query: 230 TSKAVPVKTATS 241
T K PV + S
Sbjct: 270 TPKFTPVASKFS 281
Score = 43 (20.2 bits), Expect = 8.0e-41, Sum P(3) = 8.0e-41
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 181 YEAPPVYENIQELNKPPKPGP 201
+ PP +N ++ P PGP
Sbjct: 330 HPVPPPAQNQNQVRSPGAPGP 350
Score = 40 (19.1 bits), Expect = 1.0e-37, Sum P(2) = 1.0e-37
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 178 YPPYEAPPVYENIQELNKPPKPGPQVPV 205
+P PP E E PP P P+ V
Sbjct: 114 FPSPPPPPEEEGGPEAPIPPPPQPREKV 141
Score = 39 (18.8 bits), Expect = 6.3e-41, Sum P(3) = 6.3e-41
Identities = 7/11 (63%), Positives = 7/11 (63%)
Query: 27 EGTSRAPAPPP 37
EG AP PPP
Sbjct: 124 EGGPEAPIPPP 134
>FB|FBgn0011642 [details] [associations]
symbol:Zyx "Zyxin" species:7227 "Drosophila melanogaster"
[GO:0005856 "cytoskeleton" evidence=ISS] [GO:0005911 "cell-cell
junction" evidence=ISS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005925 "focal adhesion" evidence=ISS] [GO:0007155 "cell
adhesion" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IDA] [GO:0045805
"positive regulation of eclosion" evidence=IMP] [GO:0007593
"chitin-based cuticle sclerotization" evidence=IMP] [GO:0007430
"terminal branching, open tracheal system" evidence=IMP]
[GO:0048526 "imaginal disc-derived wing expansion" evidence=IMP]
[GO:0035002 "liquid clearance, open tracheal system" evidence=IMP]
[GO:0045572 "positive regulation of imaginal disc growth"
evidence=IMP] [GO:0035003 "subapical complex" evidence=IDA]
[GO:0035329 "hippo signaling cascade" evidence=IMP] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0035329 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GO:GO:0001725 GeneTree:ENSGT00610000085810 GO:GO:0045572
HSSP:Q05158 EMBL:AE014135 GO:GO:0048526 GO:GO:0007593 GO:GO:0035003
GO:GO:0007430 GO:GO:0035002 KO:K16676 CTD:7791 UniGene:Dm.20809
GeneID:317824 KEGG:dme:Dmel_CG32018 FlyBase:FBgn0011642
GO:GO:0045805 EMBL:AF219947 GenomeRNAi:317824 NextBio:843834
EMBL:AF219948 RefSeq:NP_652015.1 RefSeq:NP_726642.1
RefSeq:NP_726643.1 SMR:Q9N675 DIP:DIP-58972N STRING:Q9N675
EnsemblMetazoa:FBtr0089211 EnsemblMetazoa:FBtr0089212
EnsemblMetazoa:FBtr0089216 UCSC:CG32018-RB InParanoid:Q9N675
OMA:EALAYHK Uniprot:Q9N675
Length = 585
Score = 407 (148.3 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 66/130 (50%), Positives = 93/130 (71%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ QT EKC++C I+E IL+A GK YHP CF C +C + LDG+ FTVD N+ YC+ D+
Sbjct: 441 YLQTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITDF 500
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
H+ FAP+C C + I P G EET+RVV++D+ FH++CY CEDCGL L+ E + R CYPL
Sbjct: 501 HKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFHLECYKCEDCGLLLSSEAEGRGCYPL 560
Query: 517 QGRLMCRACH 526
++C++C+
Sbjct: 561 DDHVLCKSCN 570
Score = 206 (77.6 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 51/167 (30%), Positives = 76/167 (45%)
Query: 316 FGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYS 375
+G C C +V G C AM +YH CF C C L+GK FY + G+ YCE DYL
Sbjct: 385 YGRCVKCNSRVLGESSGCTAMDQIYHIFCFTCTDCQINLQGKPFYALDGKPYCEYDYL-- 442
Query: 376 GFQQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMI--LQAMGKSYHPGC 428
QT EKC++C I+E +G + C +CG + ++ + A ++Y
Sbjct: 443 ---QTLEKCSVCMEPILERILRATGKPYHPQCFTCVVCGKSLDGLLFTVDATNQNYCITD 499
Query: 429 F------RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACG 469
F RCC+C + + P + + +H + KC CG
Sbjct: 500 FHKKFAPRCCVCKQPIMPDPGQEETIRVVALDRSFH-LECYKCEDCG 545
Score = 42 (19.8 bits), Expect = 1.1e-40, Sum P(2) = 1.1e-40
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 192 ELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTS 231
EL PP P V E R + P Y + N T+
Sbjct: 230 ELPPPPSPESAVSSSYSELRHATLEFNKPIDYLQNNQTTN 269
>UNIPROTKB|Q08DQ6 [details] [associations]
symbol:ZYX "Zyxin" species:9913 "Bos taurus" [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005913 "cell-cell adherens
junction" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0001725 "stress fiber" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS50023 SMART:SM00132 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0005925 GO:GO:0005913 Gene3D:2.10.110.10
GO:GO:0001725 GeneTree:ENSGT00610000085810 eggNOG:NOG279196
HOGENOM:HOG000220910 HOVERGEN:HBG093602 CTD:7791 KO:K06273
OrthoDB:EOG4MSCZN OMA:DNGCFPL EMBL:DAAA02011805 EMBL:BC123619
IPI:IPI00705781 RefSeq:NP_001071569.1 UniGene:Bt.65076 SMR:Q08DQ6
STRING:Q08DQ6 Ensembl:ENSBTAT00000023912 GeneID:768226
KEGG:bta:768226 InParanoid:Q08DQ6 NextBio:20918524 Uniprot:Q08DQ6
Length = 559
Score = 386 (140.9 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 65/130 (50%), Positives = 88/130 (67%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ T EKC+ CG I + +L+A GK+YHP CF C +C L+G F VD N+ +CV DY
Sbjct: 426 YTDTLEKCSTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANRPHCVPDY 485
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
H+ +AP+C+ C + I P G EETVRVV++DK+FH+ CY CEDCG L+ E D C+PL
Sbjct: 486 HKQYAPRCSVCAEPIMPEPGREETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPL 545
Query: 517 QGRLMCRACH 526
G ++CR CH
Sbjct: 546 DGHVLCRKCH 555
Score = 165 (63.1 bits), Expect = 3.8e-08, Sum P(3) = 3.8e-08
Identities = 51/194 (26%), Positives = 81/194 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C + + + A +A+G L+H CF C C + L+G+ FY++ G YCE Y
Sbjct: 373 CGRCHQPLARSQPAVRALGQLFHITCFTCRQCEQQLQGQQFYSLEGAPYCEGCYT----- 427
Query: 379 QTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMILQAMGKSYHPGCF---- 429
T EKC+ CG I + +G + C +C +E + ++ P C
Sbjct: 428 DTLEKCSTCGQPITDRMLRATGKAYHPQCFTCVVCA-CPLEGTSFIVDQANRPHCVPDYH 486
Query: 430 -----RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RC +C E + P + + ++H M KC CGK ++ +E +
Sbjct: 487 KQYAPRCSVCAEPIMPEPGREETVRVVALDKNFH-MKCYKCEDCGKPLS-IEADDNGC-- 542
Query: 485 VSMDKDFHVDCYMC 498
D HV C C
Sbjct: 543 --FPLDGHVLCRKC 554
Score = 37 (18.1 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 28 GTSRAPAPPPVD 39
G + P PPP+D
Sbjct: 88 GGAFPPPPPPID 99
Score = 37 (18.1 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 12 DAKCKPVGAIESFLVEGTSRAPAPPPVDY 40
D++ P + + P PPP D+
Sbjct: 41 DSEPPPAAGAQRAQMGRVGEIPPPPPEDF 69
Score = 37 (18.1 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 162 RKAQPQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKPGP 201
+K +PQV + + +P PP +N ++ PGP
Sbjct: 308 QKEKPQVQE-----KQHP---VPPPTQNQNQVRPAGAPGP 339
Score = 37 (18.1 bits), Expect = 1.1e-40, Sum P(3) = 1.1e-40
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 167 QVPQGLKYIRDYPPYEAPPVYENIQELNKP-PKPGPQVPVFG 207
Q+ Q L ++P ++ P+ E+ ++P + P V G
Sbjct: 350 QLTQKLMQDMEHPQKQSVPINESCGRCHQPLARSQPAVRALG 391
>UNIPROTKB|F1P7F8 [details] [associations]
symbol:ZYX "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 OMA:DNGCFPL EMBL:AAEX03010185
EMBL:AAEX03010186 EMBL:AAEX03010187 Ensembl:ENSCAFT00000005812
Uniprot:F1P7F8
Length = 563
Score = 378 (138.1 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 65/130 (50%), Positives = 86/130 (66%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ T EKC CG I + +L+A GK+YHP CF C +C L+G F VD N+ +CV DY
Sbjct: 430 YTDTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANRPHCVPDY 489
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
H+ +AP+C+ C I P G EETVRVV++DK+FH+ CY CEDCG L+ E D C+PL
Sbjct: 490 HKQYAPRCSVCEGPIMPEPGREETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPL 549
Query: 517 QGRLMCRACH 526
G ++CR CH
Sbjct: 550 DGHVLCRKCH 559
Score = 164 (62.8 bits), Expect = 1.6e-08, Sum P(3) = 1.6e-08
Identities = 51/194 (26%), Positives = 79/194 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C + + A +A+G L+H CF C CG+ L+G+ FY++ G YCE Y
Sbjct: 377 CGRCHQPLARTQPAVRALGQLFHITCFTCHQCGQQLQGQQFYSLEGAPYCEGCYT----- 431
Query: 379 QTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMILQAMGKSYHPGCF---- 429
T EKC CG I + +G + C +C +E + ++ P C
Sbjct: 432 DTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCA-CPLEGTSFIVDQANRPHCVPDYH 490
Query: 430 -----RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RC +C + P + + ++H M KC CGK ++ +E +
Sbjct: 491 KQYAPRCSVCEGPIMPEPGREETVRVVALDKNFH-MKCYKCEDCGKPLS-IEADDNGC-- 546
Query: 485 VSMDKDFHVDCYMC 498
D HV C C
Sbjct: 547 --FPLDGHVLCRKC 558
Score = 42 (19.8 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 184 PPVYENIQELNKPPKPGP 201
PP +N ++ P PGP
Sbjct: 326 PPPAQNQNQVRSPGAPGP 343
Score = 38 (18.4 bits), Expect = 7.0e-37, Sum P(2) = 7.0e-37
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 195 KPPKPGP------QVPVFGGEHRQMAIALTSPPVYSRA 226
+PP P P PV GG ++ ++ PP R+
Sbjct: 67 RPPPPAPVSPSRGAQPVCGGARPRVRPPVSPPPSPGRS 104
Score = 37 (18.1 bits), Expect = 6.5e-40, Sum P(3) = 6.5e-40
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 19 GAIESFLVEGTSRAPAPPP 37
G L G SR PPP
Sbjct: 52 GGSRGALKSGPSRGARPPP 70
>UNIPROTKB|Q9U3F4 [details] [associations]
symbol:zyx-1 "Protein ZYX-1, isoform a" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0031430
GO:GO:0046872 GO:GO:0015629 GO:GO:0055120 GO:GO:0008270
GO:GO:0000003 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 eggNOG:NOG279196 KO:K16676 EMBL:Z81082
GeneID:174951 KEGG:cel:CELE_F42G4.3 CTD:174951 PIR:C88346
PIR:T22111 RefSeq:NP_496776.1 ProteinModelPortal:Q9U3F4 SMR:Q9U3F4
DIP:DIP-25080N IntAct:Q9U3F4 MINT:MINT-1129713 STRING:Q9U3F4
PaxDb:Q9U3F4 PRIDE:Q9U3F4 EnsemblMetazoa:F42G4.3a.1
EnsemblMetazoa:F42G4.3a.2 UCSC:F42G4.3a.1 WormBase:F42G4.3a
HOGENOM:HOG000016880 InParanoid:Q9U3F4 NextBio:886160
ArrayExpress:Q9U3F4 Uniprot:Q9U3F4
Length = 603
Score = 399 (145.5 bits), Expect = 5.2e-39, Sum P(2) = 5.2e-39
Identities = 74/191 (38%), Positives = 110/191 (57%)
Query: 343 NCFICCSCGRALRG-KAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMYSG-FQQ 400
N IC CG+ + G + N +++ + + +T + G +Q
Sbjct: 407 NINICVGCGKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGASFYNIDDKPTCEGCYQN 466
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
+ EKC C I + +L+A G YH CF C C + LDG+PFT+D DN ++CV +H
Sbjct: 467 SLEKCTACNRAISDKLLRACGGVYHVNCFVCFSCKKSLDGIPFTLDKDNNVHCVPCFHDK 526
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPLQGR 519
FAP+CA C K I P +G +E+VRVV+MDK FHVDCY CEDCG+QL+ + + + CYP+
Sbjct: 527 FAPRCALCSKPIVPQDGEKESVRVVAMDKSFHVDCYKCEDCGMQLSSKLEGQGCYPIDNH 586
Query: 520 LMCRACHLSHL 530
L+C+ C+ + L
Sbjct: 587 LLCKTCNGNRL 597
Score = 161 (61.7 bits), Expect = 6.5e-08, Sum P(2) = 6.5e-08
Identities = 46/175 (26%), Positives = 76/175 (43%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
IC CG+++TG C AM ++H +CF C C + L G +FYN+ + CE Y
Sbjct: 410 ICVGCGKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGASFYNIDDKPTCEGCY----- 464
Query: 378 QQTAEKCAICGHLIMEMY----SG-FQQTAEKCAICGHLI--MEMILQAMGKSYHPGCF- 429
Q + EKC C I + G + C C + + L + CF
Sbjct: 465 QNSLEKCTACNRAISDKLLRACGGVYHVNCFVCFSCKKSLDGIPFTLDKDNNVHCVPCFH 524
Query: 430 -----RCCLCNECLDGVPFTVDVDN-KIYCVNDYHRMFAPKCAACGKGITP-VEG 477
RC LC++ + VP + ++ ++ ++ + KC CG ++ +EG
Sbjct: 525 DKFAPRCALCSKPI--VPQDGEKESVRVVAMDKSFHVDCYKCEDCGMQLSSKLEG 577
Score = 39 (18.8 bits), Expect = 5.2e-39, Sum P(2) = 5.2e-39
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 33 PAPPPVDYKQYERGNIIASSKFAT 56
P PPP G I+ S K+ T
Sbjct: 3 PPPPPPPPPLLPSGEILPSRKWKT 26
>UNIPROTKB|Q04584 [details] [associations]
symbol:ZYX "Zyxin" species:9031 "Gallus gallus" [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA] [GO:0005913
"cell-cell adherens junction" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0007155
GO:GO:0005925 GO:GO:0005913 Gene3D:2.10.110.10 GO:GO:0001725
GeneTree:ENSGT00610000085810 eggNOG:NOG279196 HOGENOM:HOG000220910
EMBL:X69190 IPI:IPI00574017 PIR:A44358 RefSeq:NP_001004386.1
UniGene:Gga.4325 ProteinModelPortal:Q04584 IntAct:Q04584
STRING:Q04584 Ensembl:ENSGALT00000023672 GeneID:418300
KEGG:gga:418300 CTD:7791 InParanoid:Q04584 KO:K06273 OMA:FHAHCFR
OrthoDB:EOG4MSCZN NextBio:20821496 Uniprot:Q04584
Length = 542
Score = 384 (140.2 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 70/160 (43%), Positives = 99/160 (61%)
Query: 368 CEEDYLYSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPG 427
CE+ F EK C + Y+G T EKC++C I + +L+A G SYHP
Sbjct: 383 CEKQLQGQQFYNVDEK-PFCE----DCYAG---TLEKCSVCKQTITDRMLKATGNSYHPQ 434
Query: 428 CFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM 487
CF C +C+ L+G F VD N+ +CV+DYHR +AP+C+ C + I P G +ETVRVV++
Sbjct: 435 CFTCVMCHTPLEGASFIVDQANQPHCVDDYHRKYAPRCSVCSEPIMPEPGKDETVRVVAL 494
Query: 488 DKDFHVDCYMCEDCGLQLTDEPDKR-CYPLQGRLMCRACH 526
+K+FH+ CY CEDCG L+ E D+ C+PL G ++C CH
Sbjct: 495 EKNFHMKCYKCEDCGRPLSIEADENGCFPLDGHVLCMKCH 534
Score = 172 (65.6 bits), Expect = 6.6e-10, Sum P(2) = 6.6e-10
Identities = 50/195 (25%), Positives = 85/195 (43%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + ++ A +A+ L+H CF C C + L+G+ FYNV + +CE+ Y+G
Sbjct: 351 LCGFCRKPLSRTQPAVRALDCLFHVECFTCFKCEKQLQGQQFYNVDEKPFCED--CYAG- 407
Query: 378 QQTAEKCAICGHLIMEMY-----SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCF--- 429
T EKC++C I + + + C +C H +E + ++ P C
Sbjct: 408 --TLEKCSVCKQTITDRMLKATGNSYHPQCFTCVMC-HTPLEGASFIVDQANQPHCVDDY 464
Query: 430 ------RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVR 483
RC +C+E + P + + ++H M KC CG+ ++ +E E
Sbjct: 465 HRKYAPRCSVCSEPIMPEPGKDETVRVVALEKNFH-MKCYKCEDCGRPLS-IEADENGC- 521
Query: 484 VVSMDKDFHVDCYMC 498
D HV C C
Sbjct: 522 ---FPLDGHVLCMKC 533
Score = 45 (20.9 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 20/73 (27%), Positives = 27/73 (36%)
Query: 169 PQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANT 228
P GL P+ AP + + L P P P +P Q T PPV S +
Sbjct: 187 PPGLDSTPAPAPWAAPQ--QRKEPLASVPPP-PSLP------SQPTAKFTPPPVASSPGS 237
Query: 229 VTSKAVPVKTATS 241
VP+ + S
Sbjct: 238 KPGATVPMAPSNS 250
Score = 40 (19.1 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 179 PPYEAPPVYENIQELNKPPKPGPQVPVF 206
PP+E P + PP P P P+F
Sbjct: 107 PPFEEPFPPAPDEAFPSPPPPPP--PMF 132
Score = 40 (19.1 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 19/72 (26%), Positives = 29/72 (40%)
Query: 179 PPYEAPPVYENIQELNKPPKPGPQV--PVFGGEHRQMAIALT--SPPVYSRANTVTSKAV 234
PP PP+++ L PP V P+ H +++ A +PP S+ S +
Sbjct: 124 PPPPPPPMFDEGPALQIPPGSTGSVEKPLAPKAHVEISSAPRDPTPPFPSKFTPKPSGTL 183
Query: 235 PVKTATSLSVTP 246
K L TP
Sbjct: 184 SSKPP-GLDSTP 194
Score = 38 (18.4 bits), Expect = 7.3e-38, Sum P(2) = 7.3e-38
Identities = 8/17 (47%), Positives = 9/17 (52%)
Query: 185 PVYENIQELNKPPKPGP 201
PV +EL PP P P
Sbjct: 74 PVSVTAEELPLPPPPPP 90
>UNIPROTKB|Q0VA45 [details] [associations]
symbol:zyx "Zyxin" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0001725 "stress fiber" evidence=ISS] [GO:0005925
"focal adhesion" evidence=ISS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0007155 GO:GO:0006357 GO:GO:0006351 GO:GO:0005925
Gene3D:2.10.110.10 GO:GO:0001725 GO:GO:0008134 CTD:7791 KO:K06273
HOVERGEN:HBG108781 EMBL:BC121255 RefSeq:NP_001072265.1
UniGene:Str.45714 ProteinModelPortal:Q0VA45 GeneID:779718
KEGG:xtr:779718 Xenbase:XB-GENE-6453993 Uniprot:Q0VA45
Length = 674
Score = 393 (143.4 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 82/193 (42%), Positives = 113/193 (58%)
Query: 346 ICCSCGRALR--------GKAFYNVHGRVY--CEEDYLYSGFQQTAEKCAICGHLIMEMY 395
+C CGR L G+ Y+V CE+ + ++A K +C E Y
Sbjct: 482 LCGFCGRGLSRTETVVRAGEHLYHVTCFTCSKCEQQLQGQQYYESAGK-PLCE----ECY 536
Query: 396 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKI-YCV 454
Q T E CA+C I E +L+A+G++YHP CF C +C L G PF VD DNK+ +CV
Sbjct: 537 ---QDTLECCAVCEKKITERLLRAIGQAYHPSCFTCAVCKCSLQGEPFIVD-DNKLPHCV 592
Query: 455 NDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-C 513
+DYHR +AP+C CG I P G +ETVRVV+++K+FH+ CY CEDCG L+ E D C
Sbjct: 593 SDYHRRYAPRCTVCGDPIAPEPGRDETVRVVALEKNFHMMCYKCEDCGCPLSIEADDGGC 652
Query: 514 YPLQGRLMCRACH 526
+PL G ++C+ CH
Sbjct: 653 FPLDGHVLCKKCH 665
Score = 154 (59.3 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 50/194 (25%), Positives = 78/194 (40%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C CG ++ +A +LYH CF C C + L+G+ +Y G+ CEE Y
Sbjct: 482 LCGFCGRGLSRTETVVRAGEHLYHVTCFTCSKCEQQLQGQQYYESAGKPLCEECY----- 536
Query: 378 QQTAEKCAICGHLIMEMY-----SGFQQTAEKCAIC-----GH--LIMEMILQAMGKSYH 425
Q T E CA+C I E + + CA+C G ++ + L YH
Sbjct: 537 QDTLECCAVCEKKITERLLRAIGQAYHPSCFTCAVCKCSLQGEPFIVDDNKLPHCVSDYH 596
Query: 426 PGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RC +C + + P + + ++H M KC CG ++ +E +
Sbjct: 597 RRYAPRCTVCGDPIAPEPGRDETVRVVALEKNFH-MMCYKCEDCGCPLS-IEADDGGC-- 652
Query: 485 VSMDKDFHVDCYMC 498
D HV C C
Sbjct: 653 --FPLDGHVLCKKC 664
Score = 47 (21.6 bits), Expect = 1.6e-38, Sum P(2) = 1.6e-38
Identities = 19/51 (37%), Positives = 22/51 (43%)
Query: 171 GLKYIRDYPPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPP 221
GL +D PP PP L PP+P P PV E + A L PP
Sbjct: 153 GLSDTQD-PPASVPPPPP---PLPSPPEPAP--PVLC-EAPKPAPVLPKPP 196
Score = 37 (18.1 bits), Expect = 1.8e-37, Sum P(2) = 1.8e-37
Identities = 9/39 (23%), Positives = 15/39 (38%)
Query: 166 PQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQVP 204
P+ P + + PP P ++ + KP P P
Sbjct: 193 PKPPPPSAFPKPEPPQSVAPKAQSSIFIPKPSPPSAVAP 231
>UNIPROTKB|B4DQX7 [details] [associations]
symbol:ZYX "Zyxin, isoform CRA_a" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005925 "focal adhesion"
evidence=IDA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS50023
SMART:SM00132 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 EMBL:CH471198 EMBL:AC092214
HOGENOM:HOG000220910 HOVERGEN:HBG093602 UniGene:Hs.490415
HGNC:HGNC:13200 ChiTaRS:ZYX EMBL:AK299005 EMBL:AK316227
IPI:IPI00926316 SMR:B4DQX7 STRING:B4DQX7 Ensembl:ENST00000392910
Uniprot:B4DQX7
Length = 415
Score = 384 (140.2 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 64/130 (49%), Positives = 87/130 (66%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ T EKC CG I + +L+A GK+YHP CF C +C L+G F VD N+ +CV DY
Sbjct: 280 YTDTLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDY 339
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
H+ +AP+C+ C + I P G +ETVRVV++DK+FH+ CY CEDCG L+ E D C+PL
Sbjct: 340 HKQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPL 399
Query: 517 QGRLMCRACH 526
G ++CR CH
Sbjct: 400 DGHVLCRKCH 409
Score = 171 (65.3 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 53/200 (26%), Positives = 82/200 (41%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + + A A +A+G L+H CF C C + L+G+ FY++ G YCE Y
Sbjct: 226 LCGRCHQPLARAQPAVRALGQLFHIACFTCHQCAQQLQGQQFYSLEGAPYCEGCYT---- 281
Query: 378 QQTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLI--MEMILQAMGK-----SYH 425
T EKC CG I + +G + C +C + I+ + YH
Sbjct: 282 -DTLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEGTSFIVDQANRPHCVPDYH 340
Query: 426 PGCF-RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RC +C+E + P + + ++H M KC CGK ++ +E +
Sbjct: 341 KQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFH-MKCYKCEDCGKPLS-IEADDNGC-- 396
Query: 485 VSMDKDFHVDCYMCEDCGLQ 504
D HV C C Q
Sbjct: 397 --FPLDGHVLCRKCHTARAQ 414
Score = 44 (20.5 bits), Expect = 1.7e-38, Sum P(2) = 1.7e-38
Identities = 21/72 (29%), Positives = 30/72 (41%)
Query: 179 PPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQ-MAIALTSP---PVYSRA-----NTV 229
P AP + + P+P PQV + Q +++A T P P S A + V
Sbjct: 53 PQVPAPAQSQTQFHVQPQPQPKPQVQLHVQSQTQPVSLANTQPRGPPASSPAPAPKFSPV 112
Query: 230 TSKAVPVKTATS 241
T K PV + S
Sbjct: 113 TPKFTPVASKFS 124
Score = 43 (20.2 bits), Expect = 2.2e-38, Sum P(2) = 2.2e-38
Identities = 7/21 (33%), Positives = 11/21 (52%)
Query: 181 YEAPPVYENIQELNKPPKPGP 201
+ PP +N ++ P PGP
Sbjct: 173 HPVPPPAQNQNQVRSPGAPGP 193
>UNIPROTKB|F1SRV9 [details] [associations]
symbol:ZYX "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 CTD:7791 KO:K06273 OMA:DNGCFPL
EMBL:CU928380 EMBL:CU929961 RefSeq:XP_003134640.2
Ensembl:ENSSSCT00000017924 GeneID:100524720 KEGG:ssc:100524720
ArrayExpress:F1SRV9 Uniprot:F1SRV9
Length = 568
Score = 383 (139.9 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 65/130 (50%), Positives = 87/130 (66%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ T EKC CG I + +L+A GK+YHP CF C +C L+G F VD N+ +CV DY
Sbjct: 433 YTDTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANRPHCVPDY 492
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
H+ +AP+C+ C + I P G EETVRVV++DK+FH+ CY CEDCG L+ E D C+PL
Sbjct: 493 HKQYAPRCSVCAEPIMPEPGREETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPL 552
Query: 517 QGRLMCRACH 526
G ++CR CH
Sbjct: 553 DGHVLCRKCH 562
Score = 165 (63.1 bits), Expect = 6.0e-09, Sum P(2) = 6.0e-09
Identities = 52/194 (26%), Positives = 80/194 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C + + A A +A+G L+H CF C C + L+G+ FY++ G YCE Y
Sbjct: 380 CGRCRQPLARAQPAVRALGQLFHITCFTCHQCEQQLQGQQFYSLEGAPYCEGCYT----- 434
Query: 379 QTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMILQAMGKSYHPGCF---- 429
T EKC CG I + +G + C +C +E + ++ P C
Sbjct: 435 DTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCA-CPLEGTSFIVDQANRPHCVPDYH 493
Query: 430 -----RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RC +C E + P + + ++H M KC CGK ++ +E +
Sbjct: 494 KQYAPRCSVCAEPIMPEPGREETVRVVALDKNFH-MKCYKCEDCGKPLS-IEADDNGC-- 549
Query: 485 VSMDKDFHVDCYMC 498
D HV C C
Sbjct: 550 --FPLDGHVLCRKC 561
Score = 44 (20.5 bits), Expect = 4.5e-38, Sum P(2) = 4.5e-38
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 179 PPYEAP----PVYENIQELNKPP---KPGPQVPV 205
PP E P P+ E I PP + GP+VP+
Sbjct: 96 PPIEEPFPPAPLEEEIFPSPPPPLVEEGGPEVPI 129
>UNIPROTKB|F1SUU4 [details] [associations]
symbol:FBLIM1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043231 "intracellular membrane-bounded organelle"
evidence=IEA] [GO:0033623 "regulation of integrin activation"
evidence=IEA] [GO:0031005 "filamin binding" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0016337 "cell-cell
adhesion" evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0043231 GO:GO:0046872 GO:GO:0030054 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0001725 GO:GO:0016337
GeneTree:ENSGT00610000085810 OMA:NRLFCKP GO:GO:0033623
EMBL:CU457447 RefSeq:XP_003127678.3 Ensembl:ENSSSCT00000003851
GeneID:100521094 KEGG:ssc:100521094 Uniprot:F1SUU4
Length = 378
Score = 344 (126.2 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 55/131 (41%), Positives = 85/131 (64%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+Q T EKC CG + E I++A+G+++HP CF C C C+ F +D N++YC++D+
Sbjct: 241 YQDTLEKCGKCGEGVREHIIRALGQAFHPTCFTCVTCARCIGDESFALDSQNEVYCLDDF 300
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEP-DKRCYPL 516
+R FAP C+ C I P +G ++ ++ M ++FH +CY CEDC + L+ EP D+ CYPL
Sbjct: 301 YRKFAPVCSICENPIIPRDG-KDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPL 359
Query: 517 QGRLMCRACHL 527
RL C+ CH+
Sbjct: 360 NNRLFCKPCHV 370
Score = 159 (61.0 bits), Expect = 1.3e-09, Sum P(3) = 1.3e-09
Identities = 52/175 (29%), Positives = 74/175 (42%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
IC C + V+ A +AM YH CF C C R L G++FY GR CE Y
Sbjct: 187 ICAFCHKTVSPRELAVEAMKRQYHAQCFTCRVCRRQLAGQSFYQKDGRPLCEPCY----- 241
Query: 378 QQTAEKCAICG-----HLIMEMYSGFQQTAEKCAICGHLIME--MILQAMGKSYHPGCFR 430
Q T EKC CG H+I + F T C C I + L + + Y F
Sbjct: 242 QDTLEKCGKCGEGVREHIIRALGQAFHPTCFTCVTCARCIGDESFALDSQNEVYCLDDFY 301
Query: 431 ---CCLCNECLDGV-PFTVDVDNKIYCVN-DYHRMFAPKCAACGKGITPVEGTEE 480
+C+ C + + P KI C+ ++H +C C + + VE T++
Sbjct: 302 RKFAPVCSICENPIIPRDGKDAFKIECMGRNFHEN-CYRCEDC-RILLSVEPTDQ 354
Score = 46 (21.3 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 166 PQVPQGLKYIRDYPPYEAPPVYENIQELN-KPPKPGPQVPVFG 207
P P L PP + ++++L+ PP P PQ V G
Sbjct: 110 PPPPMYLPPPDQEPPASVGALVSDLEQLHLPPPPPPPQALVEG 152
Score = 40 (19.1 bits), Expect = 1.3e-37, Sum P(3) = 1.3e-37
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 17 PVGAIESFLVEGTSRAPAPPPVD 39
PV A+ L G P PPP+D
Sbjct: 72 PVPAVPPQLSNGGCSLP-PPPLD 93
>UNIPROTKB|D4A7U1 [details] [associations]
symbol:Zyx "Protein Zyx" species:10116 "Rattus norvegicus"
[GO:0001725 "stress fiber" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005913 "cell-cell adherens junction"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:620698 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
GO:GO:0005913 Gene3D:2.10.110.10 GO:GO:0001725
GeneTree:ENSGT00610000085810 CTD:7791 KO:K06273 OrthoDB:EOG4MSCZN
OMA:DNGCFPL IPI:IPI00914765 RefSeq:NP_446213.1 UniGene:Rn.107363
PRIDE:D4A7U1 Ensembl:ENSRNOT00000023537 GeneID:114636
KEGG:rno:114636 NextBio:618815 ArrayExpress:D4A7U1 Uniprot:D4A7U1
Length = 564
Score = 379 (138.5 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 64/130 (49%), Positives = 87/130 (66%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ T EKC CG I + +L+A GK+YHP CF C +C L+G F VD N+ +CV DY
Sbjct: 429 YTDTLEKCNTCGQPITDRMLRATGKAYHPHCFTCVVCACPLEGTSFIVDQANQPHCVPDY 488
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
H+ +AP+C+ C + I P G +ETVRVV++DK+FH+ CY CEDCG L+ E D C+PL
Sbjct: 489 HKQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKCYKCEDCGKALSIEADDNGCFPL 548
Query: 517 QGRLMCRACH 526
G ++CR CH
Sbjct: 549 DGHVLCRKCH 558
Score = 172 (65.6 bits), Expect = 2.0e-09, Sum P(2) = 2.0e-09
Identities = 53/200 (26%), Positives = 82/200 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C + + A A +A+G L+H CF C C + L+G+ FY++ G YCE Y
Sbjct: 376 CGKCSQPLARAQPAVRALGQLFHITCFTCHQCQQQLQGQQFYSLEGAPYCEGCYT----- 430
Query: 379 QTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMILQAMGKSYHPGCF---- 429
T EKC CG I + +G + C +C +E + ++ P C
Sbjct: 431 DTLEKCNTCGQPITDRMLRATGKAYHPHCFTCVVCA-CPLEGTSFIVDQANQPHCVPDYH 489
Query: 430 -----RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RC +C+E + P + + ++H M KC CGK ++ +E +
Sbjct: 490 KQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFH-MKCYKCEDCGKALS-IEADDNGC-- 545
Query: 485 VSMDKDFHVDCYMCEDCGLQ 504
D HV C C Q
Sbjct: 546 --FPLDGHVLCRKCHSARAQ 563
Score = 41 (19.5 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 184 PPVYENIQELNKPPKPGP 201
PP +N ++ P PGP
Sbjct: 325 PPPAQNQNQVRSPGGPGP 342
Score = 40 (19.1 bits), Expect = 3.4e-37, Sum P(2) = 3.4e-37
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 28 GTSRAPAPPPVDYKQYERGNIIASSKFATPKSVDN 62
GT +P PP Y Q + ++ + P N
Sbjct: 297 GTG-SPQPPSFTYAQQKEKPLVQEKQHPLPPPAQN 330
>MGI|MGI:103072 [details] [associations]
symbol:Zyx "zyxin" species:10090 "Mus musculus" [GO:0001725
"stress fiber" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005913 "cell-cell adherens junction" evidence=ISO] [GO:0005925
"focal adhesion" evidence=ISO] [GO:0007155 "cell adhesion"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:103072
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0007155 GO:GO:0005925 GO:GO:0005913 Gene3D:2.10.110.10
GO:GO:0001725 GeneTree:ENSGT00610000085810 EMBL:CH466533
eggNOG:NOG279196 HOGENOM:HOG000220910 HOVERGEN:HBG093602 CTD:7791
KO:K06273 OrthoDB:EOG4MSCZN OMA:DNGCFPL ChiTaRS:ZYX EMBL:Y07711
EMBL:X99063 EMBL:AK147812 IPI:IPI00228360 RefSeq:NP_035907.1
UniGene:Mm.282303 ProteinModelPortal:Q62523 SMR:Q62523
STRING:Q62523 PhosphoSite:Q62523 PaxDb:Q62523 PRIDE:Q62523
Ensembl:ENSMUST00000070635 Ensembl:ENSMUST00000164375 GeneID:22793
KEGG:mmu:22793 InParanoid:Q3UGQ3 NextBio:303383 Bgee:Q62523
CleanEx:MM_ZYX Genevestigator:Q62523 GermOnline:ENSMUSG00000029860
Uniprot:Q62523
Length = 564
Score = 379 (138.5 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 64/130 (49%), Positives = 87/130 (66%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ T EKC CG I + +L+A GK+YHP CF C +C L+G F VD N+ +CV DY
Sbjct: 429 YTDTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANQPHCVPDY 488
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
H+ +AP+C+ C + I P G +ETVRVV++DK+FH+ CY CEDCG L+ E D C+PL
Sbjct: 489 HKQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFHMKCYKCEDCGKPLSIEADDNGCFPL 548
Query: 517 QGRLMCRACH 526
G ++CR CH
Sbjct: 549 DGHVLCRKCH 558
Score = 171 (65.3 bits), Expect = 2.6e-09, Sum P(2) = 2.6e-09
Identities = 53/200 (26%), Positives = 82/200 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C + + A A +A+G L+H CF C C + L+G+ FY++ G YCE Y
Sbjct: 376 CGKCNQPLARAQPAVRALGQLFHITCFTCHQCQQQLQGQQFYSLEGAPYCEGCYT----- 430
Query: 379 QTAEKCAICGHLIMEMY---SG--FQQTAEKCAICGHLIMEMILQAMGKSYHPGCF---- 429
T EKC CG I + +G + C +C +E + ++ P C
Sbjct: 431 DTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCA-CPLEGTSFIVDQANQPHCVPDYH 489
Query: 430 -----RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
RC +C+E + P + + ++H M KC CGK ++ +E +
Sbjct: 490 KQYAPRCSVCSEPIMPEPGRDETVRVVALDKNFH-MKCYKCEDCGKPLS-IEADDNGC-- 545
Query: 485 VSMDKDFHVDCYMCEDCGLQ 504
D HV C C Q
Sbjct: 546 --FPLDGHVLCRKCHSARAQ 563
Score = 41 (19.5 bits), Expect = 2.6e-37, Sum P(2) = 2.6e-37
Identities = 7/18 (38%), Positives = 10/18 (55%)
Query: 184 PPVYENIQELNKPPKPGP 201
PP +N ++ P PGP
Sbjct: 325 PPPAQNQNQVRSPGGPGP 342
Score = 38 (18.4 bits), Expect = 5.5e-37, Sum P(2) = 5.5e-37
Identities = 7/31 (22%), Positives = 12/31 (38%)
Query: 32 APAPPPVDYKQYERGNIIASSKFATPKSVDN 62
+P PP Y Q + ++ + P N
Sbjct: 300 SPQPPSFTYAQQKEKPLVQEKQHPQPPPAQN 330
>UNIPROTKB|H7BZE2 [details] [associations]
symbol:TRIP6 "Thyroid receptor-interacting protein 6"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:AC011895 HGNC:HGNC:12311 ChiTaRS:TRIP6
ProteinModelPortal:H7BZE2 Ensembl:ENST00000429658 Uniprot:H7BZE2
Length = 216
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 74/168 (44%), Positives = 99/168 (58%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
YFG C CGE V G G A+ ++H CF+C +C LRG+ FY V R YCE Y+
Sbjct: 49 YFGQCGGCGEDVVGDGAGVVALDRVFHVGCFVCSTCRAQLRGQHFYAVERRAYCEGCYVS 108
Query: 375 SGFQQTA----EKC------AICGHLIMEMYS---GFQQTAEKCAICGHLIMEMILQAMG 421
QT + C A+ ++M G Q T EKCA C I++ IL+AMG
Sbjct: 109 RSVAQTGVQWGDLCSLQPQPALVQAILMPQAPEQLGLQATLEKCATCSQPILDRILRAMG 168
Query: 422 KSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACG 469
K+YHPGCF C +C+ LDG+PFTVD ++I+C+ D+HR FAP+C+ CG
Sbjct: 169 KAYHPGCFTCVVCHRGLDGIPFTVDATSQIHCIEDFHRKFAPRCSVCG 216
>ZFIN|ZDB-GENE-070928-18 [details] [associations]
symbol:zyx "zyxin" species:7955 "Danio rerio"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-070928-18 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GeneTree:ENSGT00610000085810
EMBL:CR936322 IPI:IPI00998872 Ensembl:ENSDART00000143056
Ensembl:ENSDART00000144392 Uniprot:F1QC03
Length = 608
Score = 376 (137.4 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 63/130 (48%), Positives = 85/130 (65%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ + C+ CG I + +L+AMG+ +H CF C CN L+G PF D DNK YCV DY
Sbjct: 470 YMSSLSVCSRCGERITDRVLKAMGQCFHAHCFLCTTCNCSLEGAPFITDDDNKPYCVKDY 529
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPL 516
HR F+P C +C + I P G+EETVRVV+++K+FH+ CY CEDC L+ E D CYPL
Sbjct: 530 HRRFSPLCVSCNEPIIPDPGSEETVRVVALEKNFHLKCYRCEDCARPLSIEADADGCYPL 589
Query: 517 QGRLMCRACH 526
G+++C CH
Sbjct: 590 NGKILCMKCH 599
Score = 147 (56.8 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 43/166 (25%), Positives = 70/166 (42%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C CGE ++ + A +AM L+H++CF C SC R L+G FY+ G CEE Y+ S
Sbjct: 416 VCGKCGETLSRSQPAVRAMDKLFHSHCFCCVSCQRPLQGMQFYDRDGTPQCEECYMSS-- 473
Query: 378 QQTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLI--MEMILQAMGK-----SYHPGC 428
+C I ++ M F C C + I K YH
Sbjct: 474 LSVCSRCGERITDRVLKAMGQCFHAHCFLCTTCNCSLEGAPFITDDDNKPYCVKDYHRRF 533
Query: 429 FRCCL-CNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGIT 473
C+ CNE + P + + + ++H + +C C + ++
Sbjct: 534 SPLCVSCNEPIIPDPGSEETVRVVALEKNFH-LKCYRCEDCARPLS 578
Score = 44 (20.5 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 13/32 (40%), Positives = 18/32 (56%)
Query: 175 IRDYPP-YEAPP-VYENIQELNKPPKPGPQVP 204
+ D PP + APP V E++ L PP+ VP
Sbjct: 101 VSDAPPSFPAPPPVAEDLH-LPPPPEELTSVP 131
>UNIPROTKB|Q1JQB5 [details] [associations]
symbol:FBLIM1 "Filamin-binding LIM protein 1" species:9913
"Bos taurus" [GO:0001725 "stress fiber" evidence=ISS] [GO:0031005
"filamin binding" evidence=ISS] [GO:0033623 "regulation of integrin
activation" evidence=ISS] [GO:0016337 "cell-cell adhesion"
evidence=ISS] [GO:0005938 "cell cortex" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0043231 GO:GO:0005938
GO:GO:0008360 GO:GO:0046872 GO:GO:0008270 GO:GO:0005925
Gene3D:2.10.110.10 GO:GO:0001725 GO:GO:0016337
GeneTree:ENSGT00610000085810 GO:GO:0031005 EMBL:BC116079
IPI:IPI00712901 RefSeq:NP_001070423.1 UniGene:Bt.2860
ProteinModelPortal:Q1JQB5 STRING:Q1JQB5 Ensembl:ENSBTAT00000024926
GeneID:767833 KEGG:bta:767833 CTD:54751 eggNOG:NOG315774
HOGENOM:HOG000007533 HOVERGEN:HBG051561 InParanoid:Q1JQB5
OMA:NRLFCKP OrthoDB:EOG4PRSRD NextBio:20918202 GO:GO:0033623
Uniprot:Q1JQB5
Length = 378
Score = 338 (124.0 bits), Expect = 2.2e-36, Sum P(3) = 2.2e-36
Identities = 54/131 (41%), Positives = 85/131 (64%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+Q T EKC CG ++ E I++A+G+++HP CF C C + F +D N++YC++D+
Sbjct: 241 YQDTLEKCGKCGEVVREHIIRALGQAFHPSCFTCVTCARRIGDESFALDSQNEVYCLDDF 300
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEP-DKRCYPL 516
+R FAP C+ C I P +G ++ ++ M ++FH +CY CEDC + L+ EP D+ CYPL
Sbjct: 301 YRKFAPVCSICENPIIPRDG-KDAFKIECMGRNFHENCYRCEDCRVLLSVEPTDQGCYPL 359
Query: 517 QGRLMCRACHL 527
RL C+ CH+
Sbjct: 360 NNRLFCKPCHV 370
Score = 155 (59.6 bits), Expect = 1.5e-08, Sum P(3) = 1.5e-08
Identities = 51/175 (29%), Positives = 74/175 (42%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
IC C + V+ A +AM YH CF C C R L G++FY GR CE Y
Sbjct: 187 ICAFCHKTVSPRELAVEAMKRQYHAQCFTCRVCRRQLAGQSFYQKDGRPLCEPCY----- 241
Query: 378 QQTAEKCAICG-----HLIMEMYSGFQQTAEKCAICGHLIME--MILQAMGKSYHPGCFR 430
Q T EKC CG H+I + F + C C I + L + + Y F
Sbjct: 242 QDTLEKCGKCGEVVREHIIRALGQAFHPSCFTCVTCARRIGDESFALDSQNEVYCLDDFY 301
Query: 431 ---CCLCNECLDGV-PFTVDVDNKIYCVN-DYHRMFAPKCAACGKGITPVEGTEE 480
+C+ C + + P KI C+ ++H +C C + + VE T++
Sbjct: 302 RKFAPVCSICENPIIPRDGKDAFKIECMGRNFHEN-CYRCEDC-RVLLSVEPTDQ 354
Score = 41 (19.5 bits), Expect = 2.2e-36, Sum P(3) = 2.2e-36
Identities = 9/22 (40%), Positives = 13/22 (59%)
Query: 18 VGAIESFLVEGTSRAPAP--PP 37
VG + S++ G + AP P PP
Sbjct: 56 VGKLRSWMPPGRAAAPGPAVPP 77
Score = 39 (18.8 bits), Expect = 2.2e-36, Sum P(3) = 2.2e-36
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 177 DYPPYEA--PPVYENIQELN-KPPKPGPQVPVFG 207
D P+ A + ++++L+ PP P PQ V G
Sbjct: 118 DEEPHSAMGASLISDLEQLHLPPPPPPPQALVEG 151
Score = 38 (18.4 bits), Expect = 2.8e-36, Sum P(3) = 2.8e-36
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 148 GSYVSNDINAFQFDRKAQPQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQVPV 205
G+ + +D+ Q P PQ L + PP + P + E PP P P+ PV
Sbjct: 126 GASLISDLE--QLHLPPPPPPPQALV---EGPPLQPRPSHLKPAEEELPP-P-PEEPV 176
>MGI|MGI:1921452 [details] [associations]
symbol:Fblim1 "filamin binding LIM protein 1" species:10090
"Mus musculus" [GO:0001725 "stress fiber" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0007155 "cell adhesion" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008360 "regulation of cell shape"
evidence=IEA] [GO:0016337 "cell-cell adhesion" evidence=ISO]
[GO:0030054 "cell junction" evidence=IEA] [GO:0031005 "filamin
binding" evidence=ISO] [GO:0033623 "regulation of integrin
activation" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 MGI:MGI:1921452 GO:GO:0043231
GO:GO:0005938 GO:GO:0008360 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0001725 GO:GO:0016337
GeneTree:ENSGT00610000085810 EMBL:CH466615 GO:GO:0031005 CTD:54751
eggNOG:NOG315774 HOGENOM:HOG000007533 HOVERGEN:HBG051561
OMA:NRLFCKP OrthoDB:EOG4PRSRD GO:GO:0033623 ChiTaRS:FBLIM1
EMBL:AF513359 EMBL:AK154680 EMBL:AK170151 EMBL:AK170440
EMBL:AL670446 EMBL:BC004777 IPI:IPI00114860 RefSeq:NP_001156728.1
RefSeq:NP_598515.3 UniGene:Mm.490327 ProteinModelPortal:Q71FD7
SMR:Q71FD7 STRING:Q71FD7 PhosphoSite:Q71FD7 PaxDb:Q71FD7
PRIDE:Q71FD7 Ensembl:ENSMUST00000006381 Ensembl:ENSMUST00000105784
Ensembl:ENSMUST00000105785 GeneID:74202 KEGG:mmu:74202
InParanoid:Q3TDK3 NextBio:340094 Bgee:Q71FD7 CleanEx:MM_FBLIM1
Genevestigator:Q71FD7 GermOnline:ENSMUSG00000006219 Uniprot:Q71FD7
Length = 375
Score = 352 (129.0 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 56/131 (42%), Positives = 84/131 (64%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+Q T EKC CG ++ E +++A+GK++HP CF C C C+ F +D N++YCV D+
Sbjct: 238 YQDTLEKCGKCGEVVQEHVIRALGKAFHPPCFTCVTCARCISDESFALDSQNQVYCVADF 297
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEP-DKRCYPL 516
+R FAP C+ C I P +G ++ ++ M ++FH +CY CEDC + L+ EP D+ CYPL
Sbjct: 298 YRKFAPVCSICENPIIPRDG-KDAFKIECMGRNFHENCYRCEDCSVLLSVEPTDQGCYPL 356
Query: 517 QGRLMCRACHL 527
L C+ CHL
Sbjct: 357 NDHLFCKPCHL 367
Score = 156 (60.0 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 50/175 (28%), Positives = 72/175 (41%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + V+ A +AM YH CF C +C R L G+ FY GR CE Y
Sbjct: 184 VCGFCHKPVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQRFYQKDGRPLCEPCY----- 238
Query: 378 QQTAEKCAICG-----HLIMEMYSGFQQTAEKCAICGHLIME--MILQAMGKSYHPGCFR 430
Q T EKC CG H+I + F C C I + L + + Y F
Sbjct: 239 QDTLEKCGKCGEVVQEHVIRALGKAFHPPCFTCVTCARCISDESFALDSQNQVYCVADFY 298
Query: 431 ---CCLCNECLDGV-PFTVDVDNKIYCVN-DYHRMFAPKCAACGKGITPVEGTEE 480
+C+ C + + P KI C+ ++H +C C + VE T++
Sbjct: 299 RKFAPVCSICENPIIPRDGKDAFKIECMGRNFHEN-CYRCEDCSV-LLSVEPTDQ 351
Score = 46 (21.3 bits), Expect = 2.4e-35, Sum P(2) = 2.4e-35
Identities = 11/31 (35%), Positives = 16/31 (51%)
Query: 180 PYEAPPVY------ENIQELNKPPKPGPQVP 204
P E PPV ++++L+ PP P P P
Sbjct: 112 PEEEPPVLPGKSLISDLEQLHLPPPPPPPPP 142
Score = 42 (19.8 bits), Expect = 6.3e-35, Sum P(2) = 6.3e-35
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 184 PPVYENIQELNKPPKPGP 201
PP N ++L+ PP P P
Sbjct: 87 PPPSLNEEDLDLPPPPPP 104
Score = 39 (18.8 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 10/25 (40%), Positives = 11/25 (44%)
Query: 177 DYPPYEAPP-VYENIQELNKPPKPG 200
D PP PP Y + E P PG
Sbjct: 97 DLPPPPPPPSAYLPLPEEEPPVLPG 121
>UNIPROTKB|C9JRJ5 [details] [associations]
symbol:LIMD1 "LIM domain-containing protein 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
EMBL:AJ312686 HGNC:HGNC:6612 HOGENOM:HOG000072700 ChiTaRS:LIMD1
OrthoDB:EOG42BX96 EMBL:AC098476 EMBL:AC099539 IPI:IPI00925873
ProteinModelPortal:C9JRJ5 SMR:C9JRJ5 STRING:C9JRJ5
Ensembl:ENST00000440097 ArrayExpress:C9JRJ5 Bgee:C9JRJ5
Uniprot:C9JRJ5
Length = 620
Score = 381 (139.2 bits), Expect = 9.6e-35, P = 9.6e-35
Identities = 63/83 (75%), Positives = 74/83 (89%)
Query: 394 MYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
+YSGFQQ+A++C +CGHLIM+MILQA+GKSYHPGCFRC +CNECLDGVPFTVD +NKIYC
Sbjct: 526 LYSGFQQSADRCFLCGHLIMDMILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYC 585
Query: 454 VNDYHRMFAPKCAACGKGITPVE 476
V DYH++ APKCAACG I P E
Sbjct: 586 VRDYHKVLAPKCAACGLPILPPE 608
Score = 337 (123.7 bits), Expect = 7.0e-29, P = 7.0e-29
Identities = 72/176 (40%), Positives = 95/176 (53%)
Query: 276 LPYNVTPPRP-MGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP P P + P+ AE K+ YFG C C + V GAGQACQ
Sbjct: 429 LPCQPLVPGPELRPSAAELKLEALTQRLEREMDAHPKAD-YFGACVKCSKGVFGAGQACQ 487
Query: 335 AMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEM 394
AMGNLYH CF C +C R LRGKAFY V+G+V+CEED+LYSGFQQ+A++C +CGHLIM+M
Sbjct: 488 AMGNLYHDTCFTCAACSRKLRGKAFYFVNGKVFCEEDFLYSGFQQSADRCFLCGHLIMDM 547
Query: 395 Y-----SGFQQTAEKCAICGHLI--MEMILQAMGKSYHPGCFRCCLCNECLD-GVP 442
+ +C IC + + + + K Y + L +C G+P
Sbjct: 548 ILQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCAACGLP 603
Score = 119 (46.9 bits), Expect = 0.00076, P = 0.00076
Identities = 36/135 (26%), Positives = 62/135 (45%)
Query: 418 QAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY----HRMFAPKCAACGKGIT 473
QAMG YH CF C C+ L G F V+ K++C D+ + A +C CG I
Sbjct: 487 QAMGNLYHDTCFTCAACSRKLRGKAFYF-VNGKVFCEEDFLYSGFQQSADRCFLCGHLIM 545
Query: 474 PVEGTEETVRVVSMDKDFHVDCY---MCEDC--GLQLTDEPDKRCYPLQG--RLM---CR 523
+ + ++ K +H C+ +C +C G+ T + + + Y ++ +++ C
Sbjct: 546 DMI-------LQALGKSYHPGCFRCVICNECLDGVPFTVDSENKIYCVRDYHKVLAPKCA 598
Query: 524 ACHLSHLSRHHQSPT 538
AC L L + P+
Sbjct: 599 ACGLPILPPEVRCPS 613
>UNIPROTKB|E1BV36 [details] [associations]
symbol:FBLIM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001725 "stress fiber" evidence=IEA] [GO:0016337 "cell-cell
adhesion" evidence=IEA] [GO:0030054 "cell junction" evidence=IEA]
[GO:0031005 "filamin binding" evidence=IEA] [GO:0033623 "regulation
of integrin activation" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0043231 GO:GO:0046872 GO:GO:0030054 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0001725 GO:GO:0016337
GeneTree:ENSGT00610000085810 GO:GO:0033623 EMBL:AADN02040746
IPI:IPI00818885 Ensembl:ENSGALT00000039828 OMA:RSFHESC
ArrayExpress:E1BV36 Uniprot:E1BV36
Length = 355
Score = 348 (127.6 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 60/131 (45%), Positives = 80/131 (61%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+Q T EKCA C LI E I++A+GK +HPGCF C C + F VD K+YCV D+
Sbjct: 220 YQATLEKCAKCQGLITERIVRALGKGFHPGCFACAACGRAIGAESFAVDEQGKVYCVADF 279
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEP-DKRCYPL 516
+R FAP C AC I P E+T ++ + + FH CY CE CG+ L+ EP + CYPL
Sbjct: 280 YRKFAPMCGACKHPIIP---DEDTYKIECLGRSFHESCYRCESCGMLLSPEPTEDGCYPL 336
Query: 517 QGRLMCRACHL 527
L+C+ACH+
Sbjct: 337 GHHLLCKACHI 347
Score = 186 (70.5 bits), Expect = 3.7e-12, Sum P(2) = 3.7e-12
Identities = 61/196 (31%), Positives = 80/196 (40%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
IC C + V +AM YH +CF C +C R L G+ +Y GR C+ Y
Sbjct: 166 ICAFCHKAVGPREPTVEAMRKQYHADCFTCRTCQRRLAGQRYYQRDGRPTCDACY----- 220
Query: 378 QQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLI--MEMILQAMGKSYHPGCFR 430
Q T EKCA C LI E + GF CA CG I + GK Y F
Sbjct: 221 QATLEKCAKCQGLITERIVRALGKGFHPGCFACAACGRAIGAESFAVDEQGKVYCVADFY 280
Query: 431 ---CCLCNECLDGVPFTVDVDN-KIYCVN-DYHRMFAPKCAACGKGITPVEGTEETVRVV 485
+C C P D D KI C+ +H +C +CG ++P E TE+ +
Sbjct: 281 RKFAPMCGACKH--PIIPDEDTYKIECLGRSFHES-CYRCESCGMLLSP-EPTEDGCYPL 336
Query: 486 SMDKDFHVDCYMCEDC 501
H+ C C C
Sbjct: 337 G----HHLLCKACHIC 348
Score = 43 (20.2 bits), Expect = 1.3e-34, Sum P(2) = 1.3e-34
Identities = 14/48 (29%), Positives = 22/48 (45%)
Query: 176 RDYPPYEAPPVYENIQELNKPPKPGPQVPVF-GGEHRQMAIAL-TSPP 221
R+ P E P ++ P+P P P GE ++A+ +SPP
Sbjct: 23 RETAPREQPQAGVSLAVPEGTPRP-PVTPALPNGESSPRSLAVPSSPP 69
>WB|WBGene00006999 [details] [associations]
symbol:zyx-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000003
"reproduction" evidence=IMP] [GO:0005925 "focal adhesion"
evidence=ISS] [GO:0015629 "actin cytoskeleton" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0031430 "M band"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0017151 "DEAD/H-box RNA helicase binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0031430 GO:GO:0046872
GO:GO:0015629 GO:GO:0055120 GO:GO:0008270 GO:GO:0000003
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00610000085810
KO:K16676 EMBL:Z81082 GeneID:174951 KEGG:cel:CELE_F42G4.3
CTD:174951 RefSeq:NP_001254364.1 ProteinModelPortal:H2L2F7
SMR:H2L2F7 EnsemblMetazoa:F42G4.3e.1 EnsemblMetazoa:F42G4.3e.2
WormBase:F42G4.3e Uniprot:H2L2F7
Length = 647
Score = 360 (131.8 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 69/173 (39%), Positives = 98/173 (56%)
Query: 343 NCFICCSCGRALRG-KAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMYSG-FQQ 400
N IC CG+ + G + N +++ + + +T + G +Q
Sbjct: 407 NINICVGCGKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGASFYNIDDKPTCEGCYQN 466
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
+ EKC C I + +L+A G YH CF C C + LDG+PFT+D DN ++CV +H
Sbjct: 467 SLEKCTACNRAISDKLLRACGGVYHVNCFVCFSCKKSLDGIPFTLDKDNNVHCVPCFHDK 526
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
FAP+CA C K I P +G +E+VRVV+MDK FHVDCY CEDCG+QL+ + K C
Sbjct: 527 FAPRCALCSKPIVPQDGEKESVRVVAMDKSFHVDCYKCEDCGMQLSSK--KEC 577
Score = 161 (61.7 bits), Expect = 8.0e-08, Sum P(2) = 8.0e-08
Identities = 46/178 (25%), Positives = 76/178 (42%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
IC CG+++TG C AM ++H +CF C C + L G +FYN+ + CE Y
Sbjct: 410 ICVGCGKEITGDQPGCNAMNQIFHVDCFKCGQCSKTLAGASFYNIDDKPTCEGCY----- 464
Query: 378 QQTAEKCAICGHLIMEMY----SG-FQQTAEKCAICGHLI--MEMILQAMGKSYHPGCF- 429
Q + EKC C I + G + C C + + L + CF
Sbjct: 465 QNSLEKCTACNRAISDKLLRACGGVYHVNCFVCFSCKKSLDGIPFTLDKDNNVHCVPCFH 524
Query: 430 -----RCCLCNECLDGVPFTVDVDN-KIYCVNDYHRMFAPKCAACGKGITPVEGTEET 481
RC LC++ + VP + ++ ++ ++ + KC CG ++ + E T
Sbjct: 525 DKFAPRCALCSKPI--VPQDGEKESVRVVAMDKSFHVDCYKCEDCGMQLSSKKECEFT 580
Score = 39 (18.8 bits), Expect = 4.2e-34, Sum P(2) = 4.2e-34
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 33 PAPPPVDYKQYERGNIIASSKFAT 56
P PPP G I+ S K+ T
Sbjct: 3 PPPPPPPPPLLPSGEILPSRKWKT 26
>UNIPROTKB|E2R5M1 [details] [associations]
symbol:FBLIM1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 CTD:54751 OMA:NRLFCKP
EMBL:AAEX03001865 EMBL:AAEX03001866 RefSeq:XP_865087.1
Ensembl:ENSCAFT00000025606 GeneID:608618 KEGG:cfa:608618
Uniprot:E2R5M1
Length = 372
Score = 338 (124.0 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 53/131 (40%), Positives = 85/131 (64%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+Q T EKC C ++ E I++A+G+++HP CF C C C+ F +D +++YC++D+
Sbjct: 235 YQDTLEKCGKCDKVVQEHIIRALGRAFHPTCFTCVTCARCIGDESFALDSQDEVYCLDDF 294
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEP-DKRCYPL 516
+R FAP C+ C I P +G ++ ++ M ++FH +CY CEDC + L+ EP D+ CYPL
Sbjct: 295 YRKFAPVCSICENPIIPRDG-KDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPL 353
Query: 517 QGRLMCRACHL 527
RL C+ CH+
Sbjct: 354 NNRLFCKPCHV 364
Score = 152 (58.6 bits), Expect = 1.7e-08, Sum P(2) = 1.7e-08
Identities = 50/175 (28%), Positives = 74/175 (42%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + V+ A +AM YH CF C +C R L G++FY GR CE Y
Sbjct: 181 VCGFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEACY----- 235
Query: 378 QQTAEKCAICG-----HLIMEMYSGFQQTAEKCAICGHLIME--MILQAMGKSYHPGCFR 430
Q T EKC C H+I + F T C C I + L + + Y F
Sbjct: 236 QDTLEKCGKCDKVVQEHIIRALGRAFHPTCFTCVTCARCIGDESFALDSQDEVYCLDDFY 295
Query: 431 ---CCLCNECLDGV-PFTVDVDNKIYCVN-DYHRMFAPKCAACGKGITPVEGTEE 480
+C+ C + + P KI C+ ++H +C C + + VE T++
Sbjct: 296 RKFAPVCSICENPIIPRDGKDAFKIECMGRNFHEN-CYRCEDC-RILLSVEPTDQ 348
Score = 47 (21.6 bits), Expect = 5.6e-34, Sum P(2) = 5.6e-34
Identities = 14/47 (29%), Positives = 21/47 (44%)
Query: 180 PYEAPP------VYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSP 220
P E PP + + ++L+ PP P P P+ G Q +L P
Sbjct: 111 PDEEPPASMGASLISDFEQLHLPPPPPPPQPLAEGPPLQPRPSLPRP 157
Score = 46 (21.3 bits), Expect = 7.1e-34, Sum P(2) = 7.1e-34
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 165 QPQVPQGLKYIRDYPPYEAPPVYENIQELNK-PP-KPGPQVP 204
+P G I D+ PP Q L + PP +P P +P
Sbjct: 114 EPPASMGASLISDFEQLHLPPPPPPPQPLAEGPPLQPRPSLP 155
Score = 37 (18.1 bits), Expect = 6.2e-33, Sum P(2) = 6.2e-33
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 160 FDRKAQPQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKP 199
F++ P P + + + PP + P E PP P
Sbjct: 127 FEQLHLPPPPPPPQPLAEGPPLQPRPSLPRPAEEELPPAP 166
>UNIPROTKB|Q8WUP2 [details] [associations]
symbol:FBLIM1 "Filamin-binding LIM protein 1" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008360 "regulation of cell shape" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005938 "cell cortex"
evidence=IEA] [GO:0031005 "filamin binding" evidence=IDA]
[GO:0033623 "regulation of integrin activation" evidence=IMP]
[GO:0016337 "cell-cell adhesion" evidence=IMP] [GO:0001725 "stress
fiber" evidence=IDA] [GO:0005829 "cytosol" evidence=TAS]
[GO:0034329 "cell junction assembly" evidence=TAS] [GO:0030054
"cell junction" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0043231 GO:GO:0005829 GO:GO:0005938 GO:GO:0008360
GO:GO:0046872 GO:GO:0030054 GO:GO:0008270 GO:GO:0005925
Gene3D:2.10.110.10 GO:GO:0001725 Reactome:REACT_111155
GO:GO:0034329 GO:GO:0016337 GO:GO:0031005 CTD:54751
eggNOG:NOG315774 HOGENOM:HOG000007533 HOVERGEN:HBG051561
OMA:NRLFCKP GO:GO:0033623 EMBL:AY180161 EMBL:AF459643 EMBL:AK027444
EMBL:AK055259 EMBL:AL450998 EMBL:BC019895 EMBL:AL133035
IPI:IPI00290638 IPI:IPI00291238 IPI:IPI00386562 PIR:T42678
RefSeq:NP_001019386.1 RefSeq:NP_001019387.1 RefSeq:NP_060026.2
UniGene:Hs.530101 PDB:2K9U PDB:2W0P PDBsum:2K9U PDBsum:2W0P
ProteinModelPortal:Q8WUP2 SMR:Q8WUP2 IntAct:Q8WUP2 STRING:Q8WUP2
PhosphoSite:Q8WUP2 DMDM:125987829 PaxDb:Q8WUP2 PRIDE:Q8WUP2
DNASU:54751 Ensembl:ENST00000332305 Ensembl:ENST00000375766
Ensembl:ENST00000375771 Ensembl:ENST00000400773
Ensembl:ENST00000441801 GeneID:54751 KEGG:hsa:54751 UCSC:uc001axd.1
UCSC:uc001axg.1 UCSC:uc001axh.1 GeneCards:GC01P016083
HGNC:HGNC:24686 HPA:HPA025287 MIM:607747 neXtProt:NX_Q8WUP2
PharmGKB:PA142671776 InParanoid:Q8WUP2 PhylomeDB:Q8WUP2
ChiTaRS:FBLIM1 EvolutionaryTrace:Q8WUP2 GenomeRNAi:54751
NextBio:57355 ArrayExpress:Q8WUP2 Bgee:Q8WUP2 CleanEx:HS_FBLIM1
Genevestigator:Q8WUP2 GermOnline:ENSG00000162458 Uniprot:Q8WUP2
Length = 373
Score = 333 (122.3 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 51/131 (38%), Positives = 84/131 (64%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+Q T E+C CG ++ + I++A+G+++HP CF C C C+ F + N++YC++D+
Sbjct: 236 YQDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDF 295
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEP-DKRCYPL 516
+R FAP C+ C I P +G ++ ++ M ++FH +CY CEDC + L+ EP D+ CYPL
Sbjct: 296 YRKFAPVCSICENPIIPRDG-KDAFKIECMGRNFHENCYRCEDCRILLSVEPTDQGCYPL 354
Query: 517 QGRLMCRACHL 527
L C+ CH+
Sbjct: 355 NNHLFCKPCHV 365
Score = 158 (60.7 bits), Expect = 2.3e-09, Sum P(2) = 2.3e-09
Identities = 51/176 (28%), Positives = 76/176 (43%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
IC C + V+ A +AM YH CF C +C R L G++FY GR CE Y
Sbjct: 182 ICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCY----- 236
Query: 378 QQTAEKCAICG-----HLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGC---- 428
Q T E+C CG H+I + F + C C I + A+G C
Sbjct: 237 QDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESF-ALGSQNEVYCLDDF 295
Query: 429 FR--CCLCNECLDGV-PFTVDVDNKIYCVN-DYHRMFAPKCAACGKGITPVEGTEE 480
+R +C+ C + + P KI C+ ++H +C C + + VE T++
Sbjct: 296 YRKFAPVCSICENPIIPRDGKDAFKIECMGRNFHEN-CYRCEDC-RILLSVEPTDQ 349
Score = 49 (22.3 bits), Expect = 1.1e-33, Sum P(2) = 1.1e-33
Identities = 18/62 (29%), Positives = 25/62 (40%)
Query: 166 PQVPQGLKYIRDYPPYEAPPVYENIQELN-KPPKPGPQVPVFG-----GEHRQMAIALTS 219
P P L + P + ++++L+ PP P PQ P G G R M L
Sbjct: 109 PPPPVLLPSEEEAPAPMGASLIADLEQLHLSPPPPPPQAPAEGPSVQPGPLRPMEEELPP 168
Query: 220 PP 221
PP
Sbjct: 169 PP 170
>UNIPROTKB|G3V481 [details] [associations]
symbol:AJUBA "LIM domain-containing protein ajuba"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0016339 "calcium-dependent cell-cell
adhesion" evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA]
[GO:0030032 "lamellipodium assembly" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0031328 "positive
regulation of cellular biosynthetic process" evidence=IEA]
[GO:0033673 "negative regulation of kinase activity" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0035313 "wound healing, spreading of epidermal cells"
evidence=IEA] [GO:0043087 "regulation of GTPase activity"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043406 "positive
regulation of MAP kinase activity" evidence=IEA] [GO:0045294
"alpha-catenin binding" evidence=IEA] [GO:0046474
"glycerophospholipid biosynthetic process" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IEA] [GO:0051015
"actin filament binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS50023 GO:GO:0005829 GO:GO:0003714
GO:GO:0034613 GO:GO:0043406 GO:GO:0043123 GO:GO:0008270
GO:GO:0003682 GO:GO:0005911 GO:GO:0005925 GO:GO:0030027
GO:GO:0005667 GO:GO:0000122 GO:GO:0030334 Gene3D:2.10.110.10
EMBL:AL132780 GO:GO:0048041 GO:GO:0035313 GO:GO:0016339
GO:GO:0046474 GO:GO:0030032 GO:GO:0033673 GO:GO:0031328
GO:GO:0043087 HGNC:HGNC:20250 ChiTaRS:AJUBA SMR:G3V481
Ensembl:ENST00000553592 Ensembl:ENST00000556731 Uniprot:G3V481
Length = 80
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 55/80 (68%), Positives = 68/80 (85%)
Query: 420 MGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTE 479
MGKSYHPGCFRC +CN+CLDG+PFTVD N++YCV DYH+ +APKCAACG+ I P EG E
Sbjct: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
Query: 480 ETVRVVSMDKDFHVDCYMCE 499
+ VRV+SMD+D+H +CY CE
Sbjct: 61 DIVRVISMDRDYHFECYHCE 80
Score = 103 (41.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 23/58 (39%), Positives = 28/58 (48%)
Query: 336 MGNLYHTNCFICCSCGRALRGKAF-YNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIM 392
MG YH CF C C + L G F + +VYC DY + A KCA CG I+
Sbjct: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDY----HKNYAPKCAACGQPIL 54
>UNIPROTKB|E1C4X1 [details] [associations]
symbol:FBLIM1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 EMBL:AADN02040746 IPI:IPI00581578
Ensembl:ENSGALT00000005760 ArrayExpress:E1C4X1 Uniprot:E1C4X1
Length = 339
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 60/131 (45%), Positives = 80/131 (61%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+Q T EKCA C LI E I++A+GK +HPGCF C C + F VD K+YCV D+
Sbjct: 204 YQATLEKCAKCQGLITERIVRALGKGFHPGCFACAACGRAIGAESFAVDEQGKVYCVADF 263
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEP-DKRCYPL 516
+R FAP C AC I P E+T ++ + + FH CY CE CG+ L+ EP + CYPL
Sbjct: 264 YRKFAPMCGACKHPIIP---DEDTYKIECLGRSFHESCYRCESCGMLLSPEPTEDGCYPL 320
Query: 517 QGRLMCRACHL 527
L+C+ACH+
Sbjct: 321 GHHLLCKACHI 331
Score = 186 (70.5 bits), Expect = 7.9e-12, P = 7.9e-12
Identities = 61/196 (31%), Positives = 80/196 (40%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
IC C + V +AM YH +CF C +C R L G+ +Y GR C+ Y
Sbjct: 150 ICAFCHKAVGPREPTVEAMRKQYHADCFTCRTCQRRLAGQRYYQRDGRPTCDACY----- 204
Query: 378 QQTAEKCAICGHLIME-----MYSGFQQTAEKCAICGHLI--MEMILQAMGKSYHPGCFR 430
Q T EKCA C LI E + GF CA CG I + GK Y F
Sbjct: 205 QATLEKCAKCQGLITERIVRALGKGFHPGCFACAACGRAIGAESFAVDEQGKVYCVADFY 264
Query: 431 ---CCLCNECLDGVPFTVDVDN-KIYCVN-DYHRMFAPKCAACGKGITPVEGTEETVRVV 485
+C C P D D KI C+ +H +C +CG ++P E TE+ +
Sbjct: 265 RKFAPMCGACKH--PIIPDEDTYKIECLGRSFHES-CYRCESCGMLLSP-EPTEDGCYPL 320
Query: 486 SMDKDFHVDCYMCEDC 501
H+ C C C
Sbjct: 321 G----HHLLCKACHIC 332
>UNIPROTKB|Q5REN1 [details] [associations]
symbol:FBLIM1 "Filamin-binding LIM protein 1" species:9601
"Pongo abelii" [GO:0001725 "stress fiber" evidence=ISS] [GO:0016337
"cell-cell adhesion" evidence=ISS] [GO:0031005 "filamin binding"
evidence=ISS] [GO:0033623 "regulation of integrin activation"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005938 GO:GO:0008360
GO:GO:0046872 GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GO:GO:0001725 GO:GO:0016337 GO:GO:0031005 CTD:54751
HOVERGEN:HBG051561 GO:GO:0033623 EMBL:CR857491
RefSeq:NP_001127194.1 UniGene:Pab.10207 ProteinModelPortal:Q5REN1
GeneID:100174248 KEGG:pon:100174248 InParanoid:Q5REN1
Uniprot:Q5REN1
Length = 375
Score = 337 (123.7 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 52/131 (39%), Positives = 84/131 (64%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+Q T E+C CG ++ + I++A+G+++HP CF C C C+ F + N++YC++D+
Sbjct: 238 YQDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESFALGSQNEVYCLDDF 297
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEP-DKRCYPL 516
+R FAP C+ C I P +G ++ ++ M + FH +CY CEDC + L+ EP D+ CYPL
Sbjct: 298 YRKFAPVCSICENPIIPRDG-KDAFKIECMGRSFHENCYRCEDCRILLSVEPTDQGCYPL 356
Query: 517 QGRLMCRACHL 527
RL C+ CH+
Sbjct: 357 NNRLFCKPCHV 367
Score = 157 (60.3 bits), Expect = 2.1e-08, P = 2.1e-08
Identities = 52/177 (29%), Positives = 74/177 (41%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
IC C + V+ A +AM YH CF C +C R L G++FY GR CE Y
Sbjct: 184 ICAFCHKTVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQSFYQKDGRPLCEPCY----- 238
Query: 378 QQTAEKCAICG-----HLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGC---- 428
Q T E+C CG H+I + F + C C I + A+G C
Sbjct: 239 QDTLERCGKCGEVVRDHIIRALGQAFHPSCFTCVTCARCIGDESF-ALGSQNEVYCLDDF 297
Query: 429 FR--CCLCNECLDGV-PFTVDVDNKIYCVNDYHRMFAPKCAACG--KGITPVEGTEE 480
+R +C+ C + + P KI C+ R F C C + + VE T++
Sbjct: 298 YRKFAPVCSICENPIIPRDGKDAFKIECMG---RSFHENCYRCEDCRILLSVEPTDQ 351
>UNIPROTKB|F1SRU2 [details] [associations]
symbol:F1SRU2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 EMBL:CU928380
Ensembl:ENSSSCT00000017931 ArrayExpress:F1SRU2 Uniprot:F1SRU2
Length = 189
Score = 301 (111.0 bits), Expect = 1.6e-26, P = 1.6e-26
Identities = 51/102 (50%), Positives = 69/102 (67%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+ T EKC CG I + +L+A GK+YHP CF C +C L+G F VD N+ +CV DY
Sbjct: 88 YTDTLEKCNTCGQPITDRMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANRPHCVPDY 147
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCE 499
H+ +AP+C+ C + I P G EETVRVV++DK+FH+ CY CE
Sbjct: 148 HKQYAPRCSVCAEPIMPEPGREETVRVVALDKNFHMKCYKCE 189
Score = 142 (55.0 bits), Expect = 5.4e-09, P = 5.4e-09
Identities = 28/75 (37%), Positives = 39/75 (52%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C + + A A +A+G L+H CF C C + L+G+ FY++ G YCE Y
Sbjct: 35 CGRCRQPLARAQPAVRALGQLFHITCFTCHQCEQQLQGQQFYSLEGAPYCEGCYT----- 89
Query: 379 QTAEKCAICGHLIME 393
T EKC CG I +
Sbjct: 90 DTLEKCNTCGQPITD 104
Score = 124 (48.7 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 29/90 (32%), Positives = 44/90 (48%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFY-NVHGRVYCEEDYLYSGF 377
C+TCG+ +T + +A G YH CF C C L G +F + R +C DY
Sbjct: 95 CNTCGQPITD--RMLRATGKAYHPQCFTCVVCACPLEGTSFIVDQANRPHCVPDY----H 148
Query: 378 QQTAEKCAICGHLIMEMYSGFQQTAEKCAI 407
+Q A +C++C IM G ++T A+
Sbjct: 149 KQYAPRCSVCAEPIMPE-PGREETVRVVAL 177
>ZFIN|ZDB-GENE-061013-662 [details] [associations]
symbol:zgc:154176 "zgc:154176" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-061013-662
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:BC124831
IPI:IPI00800995 RefSeq:NP_001070771.1 UniGene:Dr.104520
ProteinModelPortal:Q08B86 GeneID:768160 KEGG:dre:768160
HOVERGEN:HBG106905 InParanoid:Q08B86 NextBio:20918477
ArrayExpress:Q08B86 Uniprot:Q08B86
Length = 292
Score = 297 (109.6 bits), Expect = 4.8e-26, P = 4.8e-26
Identities = 47/129 (36%), Positives = 78/129 (60%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
Q + E C CG +I + +++A+ ++YHP CF C C + + F ++YC+ DY+
Sbjct: 159 QASLEPCWACGDVIKDHVIRALERAYHPPCFVCTTCRQPIGEQRFAQGEVGEVYCLQDYY 218
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPLQ 517
R +AP+C CG I P + ++ V + + +H DCY C+ C + L+ EPD+R C+PL
Sbjct: 219 RKYAPQCGVCGLMIIPRDDGTDSFTVECLGRSYHEDCYRCQVCAVLLSPEPDERGCHPLD 278
Query: 518 GRLMCRACH 526
G+++CR CH
Sbjct: 279 GQMLCRTCH 287
>UNIPROTKB|Q5U1Y3 [details] [associations]
symbol:Fblim1 "Protein Fblim1" species:10116 "Rattus
norvegicus" [GO:0001725 "stress fiber" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016337 "cell-cell adhesion"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0031005
"filamin binding" evidence=IEA] [GO:0033623 "regulation of integrin
activation" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1359551 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00610000085810 CTD:54751 eggNOG:NOG315774
HOGENOM:HOG000007533 HOVERGEN:HBG051561 OrthoDB:EOG4PRSRD
EMBL:BC086398 IPI:IPI00567649 RefSeq:NP_001007555.1 UniGene:Rn.2851
STRING:Q5U1Y3 Ensembl:ENSRNOT00000045237 Ensembl:ENSRNOT00000063774
GeneID:362650 KEGG:rno:362650 InParanoid:Q5U1Y3 NextBio:680749
Genevestigator:Q5U1Y3 Uniprot:Q5U1Y3
Length = 346
Score = 271 (100.5 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 44/108 (40%), Positives = 68/108 (62%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+Q T EKC CG ++ E +++A+GK++HP CF C C C+ F +D N++YCV D+
Sbjct: 239 YQDTLEKCGKCGEVVQEHVIRALGKAFHPPCFTCVTCARCISDESFALDNQNQVYCVTDF 298
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQL 505
+R FAP C+ C I P +G ++ ++ M ++FH +CY CE LQL
Sbjct: 299 YRKFAPVCSICENPIIPRDG-KDAFKIECMGRNFHENCYRCEP-SLQL 344
Score = 151 (58.2 bits), Expect = 3.4e-08, Sum P(2) = 3.4e-08
Identities = 35/102 (34%), Positives = 44/102 (43%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + V+ A +AM YH CF C +C R L G+ FY GR CE Y
Sbjct: 185 VCGFCHKPVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQRFYQKDGRPLCEPCY----- 239
Query: 378 QQTAEKCAICG-----HLIMEMYSGFQQTAEKCAICGHLIME 414
Q T EKC CG H+I + F C C I +
Sbjct: 240 QDTLEKCGKCGEVVQEHVIRALGKAFHPPCFTCVTCARCISD 281
Score = 122 (48.0 bits), Expect = 6.6e-05, Sum P(2) = 6.6e-05
Identities = 31/112 (27%), Positives = 48/112 (42%)
Query: 399 QQTAEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVND 456
+ + + C C + E+ ++AM + YH CF C C L G F D + C
Sbjct: 180 EASTDVCGFCHKPVSPRELAVEAMKRQYHAQCFTCRTCRRQLAGQRF-YQKDGRPLCEPC 238
Query: 457 YHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDE 508
Y KC CG+ + E +R ++ K FH C+ C C ++DE
Sbjct: 239 YQDTLE-KCGKCGEVVQ-----EHVIR--ALGKAFHPPCFTCVTCARCISDE 282
Score = 44 (20.5 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 14/37 (37%), Positives = 17/37 (45%)
Query: 166 PQVPQGLKYIR-DYPPYEAPPVYENIQELNKPPKPGP 201
P+VP L PP PP+ E +L PP P P
Sbjct: 73 PEVPPQLSNGGCSLPP---PPLNEEDLDLLPPPPPPP 106
Score = 42 (19.8 bits), Expect = 1.7e-25, Sum P(2) = 1.7e-25
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 180 PYEAPPVY------ENIQELNKPPKPGP 201
P E PPV ++++L+ PP P P
Sbjct: 113 PEEEPPVVPGSSLISDLEQLHLPPPPPP 140
>UNIPROTKB|G3V5F5 [details] [associations]
symbol:AJUBA "LIM domain-containing protein ajuba"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005911 "cell-cell junction" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0016339 "calcium-dependent cell-cell
adhesion" evidence=IEA] [GO:0030027 "lamellipodium" evidence=IEA]
[GO:0030032 "lamellipodium assembly" evidence=IEA] [GO:0030334
"regulation of cell migration" evidence=IEA] [GO:0031328 "positive
regulation of cellular biosynthetic process" evidence=IEA]
[GO:0033673 "negative regulation of kinase activity" evidence=IEA]
[GO:0034613 "cellular protein localization" evidence=IEA]
[GO:0035313 "wound healing, spreading of epidermal cells"
evidence=IEA] [GO:0043087 "regulation of GTPase activity"
evidence=IEA] [GO:0043123 "positive regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043406 "positive
regulation of MAP kinase activity" evidence=IEA] [GO:0045294
"alpha-catenin binding" evidence=IEA] [GO:0046474
"glycerophospholipid biosynthetic process" evidence=IEA]
[GO:0048041 "focal adhesion assembly" evidence=IEA] [GO:0051015
"actin filament binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS50023 GO:GO:0005829 GO:GO:0003714
GO:GO:0034613 GO:GO:0043406 GO:GO:0043123 GO:GO:0008270
GO:GO:0003682 GO:GO:0005911 GO:GO:0005925 GO:GO:0030027
GO:GO:0005667 GO:GO:0000122 GO:GO:0030334 Gene3D:2.10.110.10
EMBL:AL132780 GO:GO:0048041 GO:GO:0035313 GO:GO:0016339
GO:GO:0046474 GO:GO:0030032 GO:GO:0033673 GO:GO:0031328
GO:GO:0043087 HGNC:HGNC:20250 ChiTaRS:AJUBA
ProteinModelPortal:G3V5F5 SMR:G3V5F5 Ensembl:ENST00000553911
ArrayExpress:G3V5F5 Bgee:G3V5F5 Uniprot:G3V5F5
Length = 65
Score = 286 (105.7 bits), Expect = 8.6e-25, P = 8.6e-25
Identities = 46/65 (70%), Positives = 55/65 (84%)
Query: 420 MGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTE 479
MGKSYHPGCFRC +CN+CLDG+PFTVD N++YCV DYH+ +APKCAACG+ I P EG E
Sbjct: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDYHKNYAPKCAACGQPILPSEGCE 60
Query: 480 ETVRV 484
+ VRV
Sbjct: 61 DIVRV 65
Score = 103 (41.3 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 23/58 (39%), Positives = 28/58 (48%)
Query: 336 MGNLYHTNCFICCSCGRALRGKAF-YNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIM 392
MG YH CF C C + L G F + +VYC DY + A KCA CG I+
Sbjct: 1 MGKSYHPGCFRCIVCNKCLDGIPFTVDFSNQVYCVTDY----HKNYAPKCAACGQPIL 54
>UNIPROTKB|F1LM06 [details] [associations]
symbol:Zyx "Protein Zyx" species:10116 "Rattus norvegicus"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS50023 SMART:SM00132 RGD:620698
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 IPI:IPI01016306
Ensembl:ENSRNOT00000045777 ArrayExpress:F1LM06 Uniprot:F1LM06
Length = 107
Score = 248 (92.4 bits), Expect = 1.5e-20, P = 1.5e-20
Identities = 49/116 (42%), Positives = 68/116 (58%)
Query: 412 IMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKG 471
I + +L+A GK+YHP CF C +C L+G F V ++ C+ C +
Sbjct: 2 ITDRMLRATGKAYHPHCFTCVVCACPLEGTSFIVVLE----------------CSVCSEP 45
Query: 472 ITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPLQGRLMCRACH 526
I P G +ETVRVV++DK+FH+ CY CEDCG L+ E D C+PL G ++CR CH
Sbjct: 46 IMPEPGRDETVRVVALDKNFHMKCYKCEDCGKALSIEADDNGCFPLDGHVLCRKCH 101
>RGD|620698 [details] [associations]
symbol:Zyx "zyxin" species:10116 "Rattus norvegicus" [GO:0001725
"stress fiber" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005913 "cell-cell adherens junction" evidence=ISO] [GO:0005925
"focal adhesion" evidence=ISO] [GO:0050727 "regulation of
inflammatory response" evidence=IEP] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS50023 SMART:SM00132 RGD:620698
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0050727
HOGENOM:HOG000007533 eggNOG:NOG279196 UniGene:Rn.107363
EMBL:AF329827 IPI:IPI00198124 ProteinModelPortal:Q99MM3
STRING:Q99MM3 PhosphoSite:Q99MM3 UCSC:RGD:620698 HOVERGEN:HBG076120
Genevestigator:Q99MM3 Uniprot:Q99MM3
Length = 108
Score = 222 (83.2 bits), Expect = 1.1e-17, P = 1.1e-17
Identities = 46/116 (39%), Positives = 63/116 (54%)
Query: 412 IMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKG 471
I + + +A K P CF C +C L+G F VD +C+ C +
Sbjct: 3 ITDRMPEATAKPTTPHCFTCVVCACPLEGTSFIVD----------------KRCSVCSEP 46
Query: 472 ITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR-CYPLQGRLMCRACH 526
I P G +ETVRVV++DK+FH+ CY CEDCG L+ E D C+PL G ++CR CH
Sbjct: 47 IMPEPGRDETVRVVALDKNFHMKCYKCEDCGKALSIEADDNGCFPLDGHVLCRKCH 102
>ZFIN|ZDB-GENE-081105-159 [details] [associations]
symbol:si:rp71-15d4.1 "si:rp71-15d4.1" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-081105-159 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021 EMBL:BX901930
IPI:IPI00890407 Ensembl:ENSDART00000139647 Uniprot:F1QK19
Length = 416
Score = 218 (81.8 bits), Expect = 3.6e-15, P = 3.6e-15
Identities = 59/182 (32%), Positives = 94/182 (51%)
Query: 347 CCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIME--MY--SGFQQT- 401
C SCG+ + GK + G+V+ E ++ S + E+ CG + Y +Q+
Sbjct: 183 CASCGKCIAGKMITAL-GQVWHPEHFVCSACR---EELGTCGFFERDGKPYCEKDYQKLF 238
Query: 402 AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
+ +CA C I + IL AM +++HP F CC C + L G ++ D K YC D++ +F
Sbjct: 239 SPRCAYCKGPITQNILTAMDQTWHPEHFFCCHCGD-LFGPEGYLERDGKPYCSRDFYCLF 297
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCY-PLQGRL 520
APKC+ CG+ PV+ E + + + +H DC++C DC TD C+ L GR
Sbjct: 298 APKCSGCGE---PVK---ENY-LSAANGTWHPDCFVCSDCLKPFTDG----CFLELNGRP 346
Query: 521 MC 522
+C
Sbjct: 347 LC 348
Score = 153 (58.9 bits), Expect = 7.3e-08, P = 7.3e-08
Identities = 39/129 (30%), Positives = 61/129 (47%)
Query: 402 AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFT----VDVDNKIYCVNDY 457
A KC+ CG + E L A ++HP CF +C++CL PFT ++++ + C Y
Sbjct: 298 APKCSGCGEPVKENYLSAANGTWHPDCF---VCSDCLK--PFTDGCFLELNGRPLCSLHY 352
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQ 517
H C CGK P+ G + ++D+ FH + ++C C QL+ K
Sbjct: 353 HSRQGTLCGTCGK---PIAGR----CIAALDRKFHPEHFVCAFCLRQLSQGVFKE---QA 402
Query: 518 GRLMCRACH 526
G+ C CH
Sbjct: 403 GKPYCSVCH 411
Score = 152 (58.6 bits), Expect = 9.4e-08, P = 9.4e-08
Identities = 47/166 (28%), Positives = 71/166 (42%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
G C +CG+ + AG+ A+G ++H F+C +C L F+ G+ YCE+DY
Sbjct: 181 GHCASCGKCI--AGKMITALGQVWHPEHFVCSACREELGTCGFFERDGKPYCEKDYQ--- 235
Query: 377 FQQTAEKCAIC-GHLIMEMYSGFQQTAEK----CAICGHLI-MEMILQAMGKSYHPGCFR 430
+ + +CA C G + + + QT C CG L E L+ GK Y F
Sbjct: 236 -KLFSPRCAYCKGPITQNILTAMDQTWHPEHFFCCHCGDLFGPEGYLERDGKPYCSRDFY 294
Query: 431 CCLCNECLD-GVPFTVDVDNKIYCVND-YHRMFAPKCAACGKGITP 474
C +C G P +N + N +H P C C + P
Sbjct: 295 CLFAPKCSGCGEPVK---ENYLSAANGTWH----PDCFVCSDCLKP 333
>FB|FBgn0051988 [details] [associations]
symbol:CG31988 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:AE014134 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 HSSP:P48059 OrthoDB:EOG4H44KS
EMBL:AY069027 RefSeq:NP_610098.1 UniGene:Dm.21307 SMR:Q8T0V8
STRING:Q8T0V8 EnsemblMetazoa:FBtr0081490 GeneID:326182
KEGG:dme:Dmel_CG31988 UCSC:CG31988-RA FlyBase:FBgn0051988
InParanoid:Q8T0V8 OMA:AMNAKWH GenomeRNAi:326182 NextBio:847500
Uniprot:Q8T0V8
Length = 178
Score = 192 (72.6 bits), Expect = 2.1e-14, P = 2.1e-14
Identities = 59/197 (29%), Positives = 90/197 (45%)
Query: 342 TNCFICCSCGRALR-------GKAFYNVHGRVY-CEEDYLYSGFQ-QTAEKCAICGHLIM 392
T +C C A+ GK ++ H + C+E L + F Q+ E +C +
Sbjct: 2 TESIVCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEP--VCNKCFV 59
Query: 393 EMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCC--LCNECLDGVPFTVDVDNK 450
E Y+ CA C I+E + AMG+S+H CF CC C + L F + D K
Sbjct: 60 ERYT------YTCAGCKKPILEKTICAMGESWHEDCF-CCGGACKKPLANQTF-YERDGK 111
Query: 451 IYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPD 510
YC DY +FA +CA C K IT V++M+ +H DC+ C C +T +
Sbjct: 112 PYCKKDYEDLFAARCAKCEKPITDSA-------VLAMNVKWHRDCFRCNKCENPITSQT- 163
Query: 511 KRCYPLQG-RLMCRACH 526
+ + G + +C AC+
Sbjct: 164 ---FTIDGDKPVCPACN 177
>UNIPROTKB|Q28WK7 [details] [associations]
symbol:GA15635 "GA15635" species:46245 "Drosophila
pseudoobscura pseudoobscura" [GO:0001952 "regulation of cell-matrix
adhesion" evidence=ISS] [GO:0015629 "actin cytoskeleton"
evidence=ISS] [GO:0051371 "muscle alpha-actinin binding"
evidence=ISS] Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 Gene3D:2.10.110.10 SUPFAM:SSF50156 EMBL:CM000071
GenomeReviews:CM000071_GR GO:GO:0001952 InterPro:IPR006643
SMART:SM00735 GO:GO:0051371 OrthoDB:EOG4VDNDB RefSeq:XP_001362080.2
GeneID:4805725 KEGG:dpo:Dpse_GA15635 FlyBase:FBgn0075652
InParanoid:Q28WK7 Uniprot:Q28WK7
Length = 2144
Score = 207 (77.9 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 52/183 (28%), Positives = 82/183 (44%)
Query: 346 ICCSCGRALRGKAFYNVHGRVYCEEDYL-YSG-FQQTAEKCAIC---GHLIMEMYSGFQQ 400
ICC C + + F GR++C + ++ +G ++ + G L E Y +
Sbjct: 1968 ICCQCNKEITSGPFITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCE-YCFEKY 2026
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
A C+ C I L A+GK +HP CF C C + PF ++ D YC D++ +
Sbjct: 2027 LAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKVFGNRPFFLE-DGNAYCEADWNEL 2085
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
F KC ACG PVE + V +++ ++H C+ C C L + Y GR
Sbjct: 2086 FTTKCFACG---FPVEAGDRWVE--ALNHNYHSQCFNCTYCKQNLEGQS---FYNKGGRP 2137
Query: 521 MCR 523
C+
Sbjct: 2138 FCK 2140
Score = 60 (26.2 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 26/95 (27%), Positives = 42/95 (44%)
Query: 162 RKAQPQVPQGLKYIRDYPPYEAPP--VYENIQELNKPPKPGPQVPVF-------GGEHRQ 212
+KAQPQVP+ + ++ P + P + + + P+ P+ F G H
Sbjct: 1818 QKAQPQVPRIEQQLQMELPAQHPMSRILDICDDGKVTPQQTPEPVAFRNNLRRTGATHAA 1877
Query: 213 MAIALTSPPVYSRA-NTVTSKAVPVKTATSLSVTP 246
+ P S N V+S +P TAT ++VTP
Sbjct: 1878 DRRSYIEPKQGSNTVNAVSSVTIPTATAT-VNVTP 1911
Score = 59 (25.8 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 146 PRGSYVSND-INAFQFDRKAQPQVPQGLKYIRDYPPYEAPPV 186
PRGS ++ + A +F+ + P QG+ + PY PP+
Sbjct: 1418 PRGSRLTQAMVTAPEFELRFAPPADQGIPLPEETEPYMPPPM 1459
Score = 46 (21.3 bits), Expect = 7.9e-14, Sum P(3) = 7.9e-14
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 35 PPPVDYKQYERGNIIASSKFAT 56
PPP+D K Y R + S F +
Sbjct: 1456 PPPMDMKPYMRDDYRPKSPFVS 1477
Score = 45 (20.9 bits), Expect = 3.4e-12, Sum P(2) = 3.4e-12
Identities = 12/30 (40%), Positives = 13/30 (43%)
Query: 196 PPKPGPQVPVFGGEHRQMAIALTSPPVYSR 225
PP P P PV A+ SPP SR
Sbjct: 1393 PPPPPPPAPVCAPVADPPALLRESPPRGSR 1422
Score = 41 (19.5 bits), Expect = 8.9e-12, Sum P(2) = 8.9e-12
Identities = 10/22 (45%), Positives = 10/22 (45%)
Query: 180 PYEAPPVYENIQELNKPPKPGP 201
P P V E EL PP P P
Sbjct: 536 PEPEPEVVEAGGELPLPPPPSP 557
Score = 37 (18.1 bits), Expect = 2.3e-11, Sum P(2) = 2.3e-11
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 197 PKPGPQVPVFGGE 209
P+P P+V GGE
Sbjct: 536 PEPEPEVVEAGGE 548
>FB|FBgn0051624 [details] [associations]
symbol:CG31624 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 FlyBase:FBgn0051624
EMBL:BT015299 ProteinModelPortal:Q6AWE9 SMR:Q6AWE9 STRING:Q6AWE9
PRIDE:Q6AWE9 InParanoid:Q6AWE9 ArrayExpress:Q6AWE9 Bgee:Q6AWE9
Uniprot:Q6AWE9
Length = 178
Score = 184 (69.8 bits), Expect = 1.5e-13, P = 1.5e-13
Identities = 57/197 (28%), Positives = 89/197 (45%)
Query: 342 TNCFICCSCGRALR-------GKAFYNVHGRVY-CEEDYLYSGFQ-QTAEKCAICGHLIM 392
T +C C A+ GK ++ H + C+E L + F Q+ E +C +
Sbjct: 2 TESIVCHKCQEAITKRMITALGKTWHPEHFLCHHCDEQILDATFNVQSGEP--VCNKCFV 59
Query: 393 EMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCC--LCNECLDGVPFTVDVDNK 450
E Y+ CA C I+E + AMG+ +H CF CC C + L F + D K
Sbjct: 60 ERYT------YTCAGCKKPILEKTICAMGERWHEACF-CCGGACKKPLASQTF-YERDGK 111
Query: 451 IYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPD 510
YC DY +FA +CA C K IT V++M+ +H +C+ C C +T +
Sbjct: 112 PYCKQDYEDLFAARCAKCEKPITDSA-------VLAMNVKWHRNCFQCNKCENPITSQT- 163
Query: 511 KRCYPLQG-RLMCRACH 526
+ + G + +C AC+
Sbjct: 164 ---FTIDGDKPVCPACN 177
>UNIPROTKB|J9P1P8 [details] [associations]
symbol:FHL5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 CTD:9457 OMA:YCVSCYD EMBL:AAEX03008544
EMBL:AAEX03008543 RefSeq:XP_532237.2 Ensembl:ENSCAFT00000048581
GeneID:475000 KEGG:cfa:475000 Uniprot:J9P1P8
Length = 284
Score = 150 (57.9 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 35/128 (27%), Positives = 62/128 (48%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
++ A C+ C +I + + +H CF C C + L F + D+ +C++ Y+
Sbjct: 157 KEFAHYCSFCKKVITSGGITFHDQPWHKECFLCSGCRKELCEEEF-MSRDDYPFCLDCYN 215
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
++A KCAAC K IT + G + + D+ +H +C+ C C + L E + Q
Sbjct: 216 HLYAKKCAACNKPITGLRGAKF---ICFQDRQWHSECFNCGKCSVSLVGEG----FLTQN 268
Query: 519 R-LMCRAC 525
+ + CR C
Sbjct: 269 KEIFCRKC 276
Score = 134 (52.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 42/145 (28%), Positives = 64/145 (44%)
Query: 390 LIMEMYSGFQQTAEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDV 447
L E YS + + KC C IM ++ G +H CF C C + + P +
Sbjct: 89 LCSECYSN--ECSSKCFHCKKTIMPGSRKMEFKGNYWHETCFVCEHCRQPIGTKPL-ISK 145
Query: 448 DNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTD 507
DN YCV + + FA C+ C K IT G + D+ +H +C++C C +L +
Sbjct: 146 DNGNYCVPCFEKEFAHYCSFCKKVIT--SGG-----ITFHDQPWHKECFLCSGCRKELCE 198
Query: 508 EP--DKRCYPLQGRLMCRACHLSHL 530
E + YP C C+ +HL
Sbjct: 199 EEFMSRDDYPF-----CLDCY-NHL 217
Score = 123 (48.4 bits), Expect = 7.2e-05, P = 7.2e-05
Identities = 27/89 (30%), Positives = 40/89 (44%)
Query: 421 GKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
G+ +H GCF C CN L PF D ++ C Y + KC C K I P G+
Sbjct: 59 GRHWHEGCFNCAKCNHSLVEKPFAAK-DERLLCSECYSNECSSKCFHCKKTIMP--GSR- 114
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQLTDEP 509
++ +H C++CE C + +P
Sbjct: 115 --KMEFKGNYWHETCFVCEHCRQPIGTKP 141
Score = 92 (37.4 bits), Expect = 1.6e-13, Sum P(2) = 1.6e-13
Identities = 27/96 (28%), Positives = 36/96 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C E + + G +H CF C C +L K F R+ C E YS
Sbjct: 41 CEECKEPIESDSKDLCYKGRHWHEGCFNCAKCNHSLVEKPFAAKDERLLCSE--CYSN-- 96
Query: 379 QTAEKCAICGHLIM----EMYSGFQQTAEKCAICGH 410
+ + KC C IM +M E C +C H
Sbjct: 97 ECSSKCFHCKKTIMPGSRKMEFKGNYWHETCFVCEH 132
>UNIPROTKB|Q2YDK0 [details] [associations]
symbol:FHL5 "Four and a half LIM domains protein 5"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0003713 eggNOG:NOG314122
HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 OrthoDB:EOG4XKV7B EMBL:BC110187
IPI:IPI00700645 RefSeq:NP_001069847.1 UniGene:Bt.50454
ProteinModelPortal:Q2YDK0 SMR:Q2YDK0 PRIDE:Q2YDK0
Ensembl:ENSBTAT00000002359 GeneID:615499 KEGG:bta:615499 CTD:9457
InParanoid:Q2YDK0 OMA:YCVSCYD NextBio:20899645 Uniprot:Q2YDK0
Length = 284
Score = 145 (56.1 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 31/110 (28%), Positives = 55/110 (50%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
++ A C+ C +I + + +H CF C C + L F + D+ +C++ Y+
Sbjct: 157 KEFAHYCSFCKKVITSGGITFRDQPWHKECFLCSGCRKELCEEEF-MSRDDYPFCLDCYN 215
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDE 508
++A KCAAC K IT + G + + D+ +H +C+ C C + L E
Sbjct: 216 HLYAKKCAACTKPITGLRGAKF---ICFQDRQWHSECFNCGKCSVSLVGE 262
Score = 126 (49.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 42/145 (28%), Positives = 65/145 (44%)
Query: 390 LIMEMYSGFQQTAEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDV 447
L E YS + + KC C IM ++ G +H CF C C + + P +
Sbjct: 89 LCSECYSN--ECSSKCFHCKKTIMPGSRKMEFKGNYWHETCFVCEHCRQPIGTKPL-ISK 145
Query: 448 DNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTD 507
++ YCV + + FA C+ C K IT G T R D+ +H +C++C C +L +
Sbjct: 146 ESGNYCVPCFEKEFAHYCSFCKKVITS-GGI--TFR----DQPWHKECFLCSGCRKELCE 198
Query: 508 EP--DKRCYPLQGRLMCRACHLSHL 530
E + YP C C+ +HL
Sbjct: 199 EEFMSRDDYPF-----CLDCY-NHL 217
Score = 119 (46.9 bits), Expect = 0.00020, P = 0.00020
Identities = 27/89 (30%), Positives = 39/89 (43%)
Query: 421 GKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
G +H GCF C CN L PF D ++ C Y + KC C K I P G+
Sbjct: 59 GHHWHEGCFNCTKCNHSLVEKPFAAK-DERLLCSECYSNECSSKCFHCKKTIMP--GSR- 114
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQLTDEP 509
++ +H C++CE C + +P
Sbjct: 115 --KMEFKGNYWHETCFVCEHCRQPIGTKP 141
Score = 97 (39.2 bits), Expect = 1.9e-13, Sum P(2) = 1.9e-13
Identities = 29/97 (29%), Positives = 40/97 (41%)
Query: 319 CHTCGEKV-TGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
C C E + +G+ C G+ +H CF C C +L K F R+ C E YS
Sbjct: 41 CEECKEPIESGSKDLCYK-GHHWHEGCFNCTKCNHSLVEKPFAAKDERLLCSE--CYSN- 96
Query: 378 QQTAEKCAICGHLIM----EMYSGFQQTAEKCAICGH 410
+ + KC C IM +M E C +C H
Sbjct: 97 -ECSSKCFHCKKTIMPGSRKMEFKGNYWHETCFVCEH 132
Score = 60 (26.2 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 16/56 (28%), Positives = 25/56 (44%)
Query: 402 AEKCAICGHLIMEM----ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
A+KCA C I + + + +H CF C C+ L G F + +I+C
Sbjct: 219 AKKCAACTKPITGLRGAKFICFQDRQWHSECFNCGKCSVSLVGEGFLTH-NKEIFC 273
>UNIPROTKB|F1RY03 [details] [associations]
symbol:FHL5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0003713 "transcription
coactivator activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0003713 GeneTree:ENSGT00690000101670
CTD:9457 OMA:YCVSCYD EMBL:CU326354 RefSeq:NP_001230243.1
UniGene:Ssc.44345 Ensembl:ENSSSCT00000004796 GeneID:100152075
KEGG:ssc:100152075 Uniprot:F1RY03
Length = 284
Score = 146 (56.5 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 34/128 (26%), Positives = 62/128 (48%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
++ A C+ C +I + + +H CF C C + L F + D+ +C++ Y+
Sbjct: 157 KEFAHYCSFCKKVITSGGITFHDQPWHKECFLCSGCRKELCEEEF-MSKDDYPFCLDCYN 215
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
++A KC+AC K IT + G + + D+ +H +C+ C C + L E + Q
Sbjct: 216 HLYAKKCSACTKPITGLRGAKF---ICFQDRQWHSECFNCGKCSVSLVGEG----FLTQN 268
Query: 519 R-LMCRAC 525
+ + CR C
Sbjct: 269 KEIFCRKC 276
Score = 134 (52.2 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 42/145 (28%), Positives = 64/145 (44%)
Query: 390 LIMEMYSGFQQTAEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDV 447
L E YS + + KC C IM ++ G +H CF C C + + P +
Sbjct: 89 LCSECYSN--ECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCEHCRQPIGTKPL-ISK 145
Query: 448 DNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTD 507
+N YCV + + FA C+ C K IT G + D+ +H +C++C C +L +
Sbjct: 146 ENGNYCVPCFEKEFAHYCSFCKKVIT--SGG-----ITFHDQPWHKECFLCSGCRKELCE 198
Query: 508 EP--DKRCYPLQGRLMCRACHLSHL 530
E K YP C C+ +HL
Sbjct: 199 EEFMSKDDYPF-----CLDCY-NHL 217
Score = 120 (47.3 bits), Expect = 0.00016, P = 0.00016
Identities = 26/89 (29%), Positives = 40/89 (44%)
Query: 421 GKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
G+ +H GCF C CN L PF D ++ C Y + KC C + I P G+
Sbjct: 59 GRHWHEGCFNCAKCNHSLVEKPFAAK-DERLLCSECYSNECSSKCFHCKRTIMP--GSR- 114
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQLTDEP 509
++ +H C++CE C + +P
Sbjct: 115 --KMEFKGNYWHETCFVCEHCRQPIGTKP 141
Score = 93 (37.8 bits), Expect = 3.8e-13, Sum P(2) = 3.8e-13
Identities = 27/96 (28%), Positives = 36/96 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C E + + G +H CF C C +L K F R+ C E YS
Sbjct: 41 CEECKEPIESDSKDLCYKGRHWHEGCFNCAKCNHSLVEKPFAAKDERLLCSE--CYSN-- 96
Query: 379 QTAEKCAICGHLIM----EMYSGFQQTAEKCAICGH 410
+ + KC C IM +M E C +C H
Sbjct: 97 ECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCEH 132
>UNIPROTKB|F1PUC6 [details] [associations]
symbol:LIMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 InterPro:IPR017351 PIRSF:PIRSF038003
EMBL:AAEX03011837 Ensembl:ENSCAFT00000006994 Uniprot:F1PUC6
Length = 362
Score = 146 (56.5 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 54/199 (27%), Positives = 84/199 (42%)
Query: 335 AMGNLYHTNC-FICCSC-GRALRGKAFYNVHGRVYCEEDYLYSG-FQQTAEKC--AICGH 389
A GN+ + +C C R + N +G +Y E ++ + F+ E G
Sbjct: 23 APGNMSNALANAVCQRCQARFAPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGR 82
Query: 390 LIMEMYSGFQQT-AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
E FQ A C CG I+ +++AM ++HPGCFRC LC+ L + F +
Sbjct: 83 KYCE--HDFQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAG 140
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKD-FHVDCYMCEDCGLQLTD 507
+ C ++R K GK + + + D +H D + C CG +LT
Sbjct: 141 RHL-CRPCHNR---EKAKGLGKYVCQRCHLVIDEQPLMFKNDAYHPDHFSCTHCGKELTA 196
Query: 508 EPDKRCYPLQGRLMCRACH 526
E + L+G L C CH
Sbjct: 197 EARE----LKGELYCLPCH 211
Score = 139 (54.0 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 28/93 (30%), Positives = 40/93 (43%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + A + + G LYH +CF+C C R FY GR YCE D+ F
Sbjct: 35 VCQRCQARFAPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQML-F 93
Query: 378 QQTAEKCA--ICGHLIMEMYSGFQQTAEKCAIC 408
C I G +I M + + +C +C
Sbjct: 94 APCCGSCGEFIIGRVIKAMNNNWHPGCFRCELC 126
Score = 132 (51.5 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 53/197 (26%), Positives = 83/197 (42%)
Query: 347 CC-SCGRALRGKAFY----NVHGRVY----CEEDYLYSGFQQTAEK--CAICGHLIMEMY 395
CC SCG + G+ N H + C+ + GF + A + C C + E
Sbjct: 96 CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHN--REKA 153
Query: 396 SGFQQTAEKCAICGHLIM-EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCV 454
G + C C HL++ E L +YHP F C C + L ++ ++YC+
Sbjct: 154 KGLGKYV--CQRC-HLVIDEQPLMFKNDAYHPDHFSCTHCGKELTAE--ARELKGELYCL 208
Query: 455 NDYHRMFAPKCAACGKGITPVEGTEETVRVVS-MDKDFHVDCYMCEDCGLQLTDEPDKRC 513
+ +M P C AC + P+EG RVV+ + K +HV+ ++C C R
Sbjct: 209 PCHDKMGVPICGACRR---PIEG-----RVVNALGKQWHVEHFVCAKCEKPFLGH---RH 257
Query: 514 YPLQGRLMCRACHLSHL 530
Y +G C H + L
Sbjct: 258 YEKKGLAYCET-HYNQL 273
Score = 105 (42.0 bits), Expect = 4.9e-13, Sum P(2) = 4.9e-13
Identities = 30/122 (24%), Positives = 52/122 (42%)
Query: 405 CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPK 464
C C I ++ A+GK +H F C C + G + YC Y+++F
Sbjct: 219 CGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRH-YEKKGLAYCETHYNQLFGDV 277
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRA 524
C C I EG V +++K + V+C+ C C +LT + + + +C+
Sbjct: 278 CYNCSHVI---EGDV----VSALNKAWCVNCFSCSTCNSKLTLK--NKFVEFDMKPVCKR 328
Query: 525 CH 526
C+
Sbjct: 329 CY 330
>FB|FBgn0083919 [details] [associations]
symbol:Zasp52 "Z band alternatively spliced PDZ-motif protein
52" species:7227 "Drosophila melanogaster" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030018 "Z disc" evidence=IDA] [GO:0005927 "muscle tendon
junction" evidence=IDA] [GO:0061061 "muscle structure development"
evidence=IMP] Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 EMBL:AE013599 GO:GO:0030018
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0005927 SUPFAM:SSF50156
GO:GO:0001952 eggNOG:NOG286537 InterPro:IPR006643 SMART:SM00735
GO:GO:0051371 GO:GO:0061061 EMBL:EF221635 EMBL:BT001752
EMBL:BT003565 EMBL:BT011386 EMBL:BT022171 RefSeq:NP_001027420.2
RefSeq:NP_001027421.1 RefSeq:NP_001036551.1 RefSeq:NP_001097331.2
RefSeq:NP_611058.4 RefSeq:NP_665700.2 UniGene:Dm.22165
ProteinModelPortal:A1ZA47 SMR:A1ZA47 IntAct:A1ZA47 STRING:A1ZA47
PaxDb:A1ZA47 EnsemblMetazoa:FBtr0100388 GeneID:36740
KEGG:dme:Dmel_CG30084 UCSC:CG30084-RF CTD:36740 FlyBase:FBgn0083919
InParanoid:Q8IGJ7 OMA:QEQPDPR OrthoDB:EOG4VDNDB PhylomeDB:A1ZA47
GenomeRNAi:36740 NextBio:800116 Bgee:A1ZA47 Uniprot:A1ZA47
Length = 2194
Score = 197 (74.4 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 53/183 (28%), Positives = 83/183 (45%)
Query: 346 ICCSCGRALRGKAFYNVHGRVYCEEDYL-YSG-FQQTAEKCAIC---GHLIMEMYSGFQQ 400
+C SC +RG F GR++C + ++ +G ++ + G L E Y +
Sbjct: 2019 LCNSCNVQIRGP-FITALGRIWCPDHFICVNGNCRRPLQDIGFVEEKGDLYCE-YCFEKY 2076
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
A C+ C I L A+GK +HP CF C C + PF ++ D YC D++ +
Sbjct: 2077 LAPTCSKCAGKIKGDCLNAIGKHFHPECFTCGQCGKIFGNRPFFLE-DGNAYCEADWNEL 2135
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
F KC ACG PVE + V +++ ++H C+ C C L + Y GR
Sbjct: 2136 FTTKCFACG---FPVEAGDRWVE--ALNHNYHSQCFNCTFCKQNLEGQS---FYNKGGRP 2187
Query: 521 MCR 523
C+
Sbjct: 2188 FCK 2190
Score = 113 (44.8 bits), Expect = 0.00060, Sum P(3) = 0.00060
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCE 369
C CG V + +A+ + YH+ CF C C + L G++FYN GR +C+
Sbjct: 2140 CFACGFPVEAGDRWVEALNHNYHSQCFNCTFCKQNLEGQSFYNKGGRPFCK 2190
Score = 69 (29.3 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 146 PRGSYVSND-INAFQFDRKAQPQVPQGLKYIRDYPPYEAPPVYEN--IQELNKPPKP 199
PRGS +S + A +F+ K P QG+ + PY PP+ ++E +P P
Sbjct: 937 PRGSRLSQAMVTAPEFELKFAPPADQGIPLPEETEPYMPPPIDTKPYLREDYRPKSP 993
Score = 45 (20.9 bits), Expect = 1.5e-10, Sum P(3) = 1.5e-10
Identities = 9/22 (40%), Positives = 12/22 (54%)
Query: 35 PPPVDYKQYERGNIIASSKFAT 56
PPP+D K Y R + S F +
Sbjct: 975 PPPIDTKPYLREDYRPKSPFVS 996
Score = 40 (19.1 bits), Expect = 5.5e-13, Sum P(3) = 5.5e-13
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 225 RANTVTSKAVPVKTATSLSVTPNY 248
R+ T SK P+K A + S+ P Y
Sbjct: 1781 RSPTFDSK-FPLKPAPAESIVPGY 1803
Score = 40 (19.1 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 8/18 (44%), Positives = 11/18 (61%)
Query: 20 AIESFLVEGTSRAPAPPP 37
+I S G++ APAP P
Sbjct: 1914 SIASITAPGSASAPAPVP 1931
Score = 39 (18.8 bits), Expect = 1.9e-10, Sum P(3) = 1.9e-10
Identities = 15/79 (18%), Positives = 31/79 (39%)
Query: 162 RKAQPQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPP 221
+K+Q Q PQ + + ++ Q + + QVP + +Q +L S
Sbjct: 1225 QKSQQQPPQANQQQQQQQQQRGTQQQQHSQVTQRTQQQQQQVPQQVTQQQQQEHSLLSQT 1284
Query: 222 VYSRANTVTSKAVPVKTAT 240
+ T+ + A +A+
Sbjct: 1285 TLAETQTLQANAQSQSSAS 1303
Score = 38 (18.4 bits), Expect = 2.4e-10, Sum P(3) = 2.4e-10
Identities = 14/51 (27%), Positives = 20/51 (39%)
Query: 188 ENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVKT 238
E+ + L PP P + G + S P Y R TV P++T
Sbjct: 1370 EHSEVLFPPPSPLSHLTKQGKAVQSGLHKADSIPKYQRNWTVLPTQSPIRT 1420
Score = 37 (18.1 bits), Expect = 9.5e-10, Sum P(3) = 9.5e-10
Identities = 11/58 (18%), Positives = 27/58 (46%)
Query: 155 INAFQFDRKAQPQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQ 212
+N + +++ Q + LK++R+ ++ P + N + P+ Q +H+Q
Sbjct: 186 VNFKKNEKEYQGDRSEVLKFLREEETGQSTPAFGNSHYEHDAPQQLQQPQQQYNQHQQ 243
>UNIPROTKB|E2RNC7 [details] [associations]
symbol:LIMS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 InterPro:IPR017351 PIRSF:PIRSF038003
OMA:ECFRCEL EMBL:AAEX03011837 Ensembl:ENSCAFT00000006997
Uniprot:E2RNC7
Length = 387
Score = 152 (58.6 bits), Expect = 8.1e-08, P = 8.1e-08
Identities = 37/115 (32%), Positives = 61/115 (53%)
Query: 414 EMILQAMGKSYHPGCFRCCLCNECL-DGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGI 472
E I+ + G+ YH CF C C +G+ + + + + YC +D+ +FAP C +CG+ I
Sbjct: 72 ERIVNSNGELYHEHCFVCAQCFRPFPEGLFY--EFEGRKYCEHDFQMLFAPCCGSCGEFI 129
Query: 473 TPVEGTEETVRVV-SMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACH 526
G RV+ +M+ ++H C+ CE C ++L D + GR +CR CH
Sbjct: 130 I---G-----RVIKAMNNNWHPGCFRCELCDVELADLGFVKN---AGRHLCRPCH 173
Score = 145 (56.1 bits), Expect = 4.9e-07, P = 4.9e-07
Identities = 40/131 (30%), Positives = 60/131 (45%)
Query: 398 FQQT-AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVND 456
FQ A C CG I+ +++AM ++HPGCFRC LC+ L + F + + C
Sbjct: 114 FQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHL-CRPC 172
Query: 457 YHRMFAPKCAACGKGITPVEGTEETVRVVSMDKD-FHVDCYMCEDCGLQLTDEPDKRCYP 515
++R K GK + + + D +H D + C CG +LT E +
Sbjct: 173 HNR---EKAKGLGKYVCQRCHLVIDEQPLMFKNDAYHPDHFSCTHCGKELTAEARE---- 225
Query: 516 LQGRLMCRACH 526
L+G L C CH
Sbjct: 226 LKGELYCLPCH 236
Score = 139 (54.0 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 28/93 (30%), Positives = 40/93 (43%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + A + + G LYH +CF+C C R FY GR YCE D+ F
Sbjct: 60 VCQRCQARFAPAERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQML-F 118
Query: 378 QQTAEKCA--ICGHLIMEMYSGFQQTAEKCAIC 408
C I G +I M + + +C +C
Sbjct: 119 APCCGSCGEFIIGRVIKAMNNNWHPGCFRCELC 151
Score = 132 (51.5 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 53/197 (26%), Positives = 83/197 (42%)
Query: 347 CC-SCGRALRGKAFY----NVHGRVY----CEEDYLYSGFQQTAEK--CAICGHLIMEMY 395
CC SCG + G+ N H + C+ + GF + A + C C + E
Sbjct: 121 CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHN--REKA 178
Query: 396 SGFQQTAEKCAICGHLIM-EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCV 454
G + C C HL++ E L +YHP F C C + L ++ ++YC+
Sbjct: 179 KGLGKYV--CQRC-HLVIDEQPLMFKNDAYHPDHFSCTHCGKELTAE--ARELKGELYCL 233
Query: 455 NDYHRMFAPKCAACGKGITPVEGTEETVRVVS-MDKDFHVDCYMCEDCGLQLTDEPDKRC 513
+ +M P C AC + P+EG RVV+ + K +HV+ ++C C R
Sbjct: 234 PCHDKMGVPICGACRR---PIEG-----RVVNALGKQWHVEHFVCAKCEKPFLGH---RH 282
Query: 514 YPLQGRLMCRACHLSHL 530
Y +G C H + L
Sbjct: 283 YEKKGLAYCET-HYNQL 298
Score = 105 (42.0 bits), Expect = 6.4e-13, Sum P(2) = 6.4e-13
Identities = 30/122 (24%), Positives = 52/122 (42%)
Query: 405 CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPK 464
C C I ++ A+GK +H F C C + G + YC Y+++F
Sbjct: 244 CGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRH-YEKKGLAYCETHYNQLFGDV 302
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRA 524
C C I EG V +++K + V+C+ C C +LT + + + +C+
Sbjct: 303 CYNCSHVI---EGDV----VSALNKAWCVNCFSCSTCNSKLTLK--NKFVEFDMKPVCKR 353
Query: 525 CH 526
C+
Sbjct: 354 CY 355
>UNIPROTKB|F1RQH7 [details] [associations]
symbol:LIMS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005925 "focal adhesion" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 InterPro:IPR017351 PIRSF:PIRSF038003
OMA:ECFRCEL EMBL:CU855997 Ensembl:ENSSSCT00000017273 Uniprot:F1RQH7
Length = 341
Score = 152 (58.6 bits), Expect = 6.0e-08, P = 6.0e-08
Identities = 37/115 (32%), Positives = 61/115 (53%)
Query: 414 EMILQAMGKSYHPGCFRCCLCNECL-DGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGI 472
E I+ + G+ YH CF C C +G+ + + + + YC +D+ +FAP C +CG+ I
Sbjct: 26 ERIVNSNGELYHEHCFVCAQCFRPFPEGLFY--EFEGRKYCEHDFQMLFAPCCGSCGEFI 83
Query: 473 TPVEGTEETVRVV-SMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACH 526
G RV+ +M+ ++H C+ CE C ++L D + GR +CR CH
Sbjct: 84 I---G-----RVIKAMNNNWHPGCFRCELCDVELADLGFVKN---AGRHLCRPCH 127
Score = 145 (56.1 bits), Expect = 3.7e-07, P = 3.7e-07
Identities = 40/131 (30%), Positives = 61/131 (46%)
Query: 398 FQQT-AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVND 456
FQ A C CG I+ +++AM ++HPGCFRC LC+ L + F + + C
Sbjct: 68 FQMLFAPCCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHL-CRPC 126
Query: 457 YHRMFAPKCAACGKGITP-VEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYP 515
++R K GK I + ++ + +H D + C CG +LT E +
Sbjct: 127 HNR---EKAKGLGKYICQRCHLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAEARE---- 179
Query: 516 LQGRLMCRACH 526
L+G L C CH
Sbjct: 180 LKGELYCLPCH 190
Score = 136 (52.9 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 27/93 (29%), Positives = 40/93 (43%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + + + + G LYH +CF+C C R FY GR YCE D+ F
Sbjct: 14 VCQRCQARFAPSERIVNSNGELYHEHCFVCAQCFRPFPEGLFYEFEGRKYCEHDFQML-F 72
Query: 378 QQTAEKCA--ICGHLIMEMYSGFQQTAEKCAIC 408
C I G +I M + + +C +C
Sbjct: 73 APCCGSCGEFIIGRVIKAMNNNWHPGCFRCELC 105
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 53/197 (26%), Positives = 83/197 (42%)
Query: 347 CC-SCGRALRGKAFY----NVHGRVY----CEEDYLYSGFQQTAEK--CAICGHLIMEMY 395
CC SCG + G+ N H + C+ + GF + A + C C + E
Sbjct: 75 CCGSCGEFIIGRVIKAMNNNWHPGCFRCELCDVELADLGFVKNAGRHLCRPCHN--REKA 132
Query: 396 SGFQQTAEKCAICGHLIM-EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCV 454
G + C C HL++ E L +YHP F C C + L ++ ++YC+
Sbjct: 133 KGLGKYI--CQRC-HLVIDEQPLMFRNDAYHPDHFNCTHCGKELTAE--ARELKGELYCL 187
Query: 455 NDYHRMFAPKCAACGKGITPVEGTEETVRVVS-MDKDFHVDCYMCEDCGLQLTDEPDKRC 513
+ +M P C AC + P+EG RVV+ + K +HV+ ++C C R
Sbjct: 188 PCHDKMGVPICGACRR---PIEG-----RVVNALGKQWHVEHFVCAKCEKPFLGH---RH 236
Query: 514 YPLQGRLMCRACHLSHL 530
Y +G C H + L
Sbjct: 237 YEKKGLAYCET-HYNQL 252
Score = 105 (42.0 bits), Expect = 8.4e-13, Sum P(2) = 8.4e-13
Identities = 30/122 (24%), Positives = 52/122 (42%)
Query: 405 CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPK 464
C C I ++ A+GK +H F C C + G + YC Y+++F
Sbjct: 198 CGACRRPIEGRVVNALGKQWHVEHFVCAKCEKPFLGHRH-YEKKGLAYCETHYNQLFGDV 256
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRA 524
C C I EG V +++K + V+C+ C C +LT + + + +C+
Sbjct: 257 CYNCSHVI---EGDV----VSALNKAWCVNCFSCSTCNSRLTLK--NKFVEFDMKPVCKR 307
Query: 525 CH 526
C+
Sbjct: 308 CY 309
>ZFIN|ZDB-GENE-040808-49 [details] [associations]
symbol:fhl2a "four and a half LIM domains 2a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-040808-49 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:BX842683 HOVERGEN:HBG074526
GeneTree:ENSGT00690000101670 KO:K14380 OMA:QECKKTI EMBL:CR318643
EMBL:BC078393 IPI:IPI00482982 RefSeq:NP_001003732.1
UniGene:Dr.88679 SMR:Q6AZB7 Ensembl:ENSDART00000061577
GeneID:445277 KEGG:dre:445277 CTD:445277 InParanoid:Q6AZB7
NextBio:20832023 Uniprot:Q6AZB7
Length = 279
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 55/208 (26%), Positives = 84/208 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCF------ICCSCGRAL----RGKAFYNVHGR--- 365
CH C E + G + N Y C+ C C + + R ++ + H
Sbjct: 7 CHYCKESLFGKKYVLRE-DNPYCVKCYESLYSNTCEECKKPIGCNSRDLSYKDRHWHEDC 65
Query: 366 ---VYCEEDYLYSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIM--EMILQAM 420
C+ + F T ++ +C E YS + + KC C IM ++
Sbjct: 66 FHCFQCKRSLVDKPFS-TKDEQLLC----TECYSN--EYSSKCHECKKTIMPGSRKMEHK 118
Query: 421 GKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
G S+H CF C C + + G + DN YCV Y + FA +C C K IT
Sbjct: 119 GNSWHETCFTCQRCQQPI-GTKSFIPKDNHNYCVPCYEKQFAMQCVHCKKPIT------- 170
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQLTDE 508
T V D+ +H DC++C C QL+ +
Sbjct: 171 TGGVTYHDQPWHKDCFLCTGCKQQLSGQ 198
Score = 145 (56.1 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 35/121 (28%), Positives = 57/121 (47%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
+Q A +C C I + + +H CF C C + L G FT D+ YC+N +
Sbjct: 156 KQFAMQCVHCKKPITTGGVTYHDQPWHKDCFLCTGCKQQLSGQRFT-SRDDFAYCLNCFC 214
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQL------TDEPDKR 512
++A KCA+C +P+ G + + ++ +H DC+ C+ C + L TD D
Sbjct: 215 NLYAKKCASC---TSPISGLGGSKYISFEERQWHNDCFNCKKCSVSLVGRGFLTDRDDIL 271
Query: 513 C 513
C
Sbjct: 272 C 272
Score = 115 (45.5 bits), Expect = 0.00055, P = 0.00055
Identities = 32/109 (29%), Positives = 51/109 (46%)
Query: 429 FRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM- 487
+ C C E L G + + DN YCV Y +++ C C K P+ G R +S
Sbjct: 5 YDCHYCKESLFGKKYVLREDNP-YCVKCYESLYSNTCEECKK---PI-GCNS--RDLSYK 57
Query: 488 DKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLS-HLSRHHQ 535
D+ +H DC+ C C L D+P +L+C C+ + + S+ H+
Sbjct: 58 DRHWHEDCFHCFQCKRSLVDKPFST---KDEQLLCTECYSNEYSSKCHE 103
Score = 90 (36.7 bits), Expect = 9.2e-13, Sum P(2) = 9.2e-13
Identities = 20/73 (27%), Positives = 30/73 (41%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
Y CH C + + + + GN +H CF C C + + K+F YC Y
Sbjct: 97 YSSKCHECKKTIMPGSRKMEHKGNSWHETCFTCQRCQQPIGTKSFIPKDNHNYCVPCYE- 155
Query: 375 SGFQQTAEKCAIC 387
+Q A +C C
Sbjct: 156 ---KQFAMQCVHC 165
>WB|WBGene00016197 [details] [associations]
symbol:pxl-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0055120 "striated muscle dense
body" evidence=IDA] [GO:0031430 "M band" evidence=IDA] [GO:0005912
"adherens junction" evidence=IDA] [GO:0043050 "pharyngeal pumping"
evidence=IMP] [GO:0002102 "podosome" evidence=IDA] [GO:0061061
"muscle structure development" evidence=IMP] [GO:0017166 "vinculin
binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0031430 GO:GO:0002119 GO:GO:0046872 GO:GO:0055120
GO:GO:0008270 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0043050 GO:GO:0005912 GO:GO:0002102 EMBL:FO080703
eggNOG:NOG267887 HOGENOM:HOG000018764 KO:K05760 EMBL:EU239658
EMBL:EU239659 EMBL:EU239660 PIR:E88469 RefSeq:NP_001021185.2
RefSeq:NP_001021186.1 RefSeq:NP_001122677.1 UniGene:Cel.10786
ProteinModelPortal:Q09476 SMR:Q09476 DIP:DIP-27019N
MINT:MINT-1059336 STRING:Q09476 PaxDb:Q09476 PRIDE:Q09476
EnsemblMetazoa:C28H8.6a GeneID:175831 KEGG:cel:CELE_C28H8.6
CTD:175831 WormBase:C28H8.6a WormBase:C28H8.6b WormBase:C28H8.6c
InParanoid:A7YEM2 OMA:CIVGKMI NextBio:889850 GO:GO:0061061
Uniprot:Q09476
Length = 413
Score = 195 (73.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 405 CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPK 464
CA CG I+ ++ A+GK +HP + CC C L PF + + + +C DYH F+PK
Sbjct: 176 CAACGKPIIGQVVIALGKMWHPEHYTCCECGAELGQRPF-FERNGRAFCEEDYHNQFSPK 234
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
C C + IT + V V M+K+FH++C+ C +C
Sbjct: 235 CQGCHRAIT-----DRCVSV--MNKNFHIECFTCAEC 264
Score = 165 (63.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 400 QTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
Q + KC C I + + M K++H CF C CN+ F + + + YC D+ R
Sbjct: 230 QFSPKCQGCHRAITDRCVSVMNKNFHIECFTCAECNQPFGEDGFH-EKNGQTYCKRDFFR 288
Query: 460 MFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGL 503
+FAPKC C + IT + + ++ +H DC++C+ CG+
Sbjct: 289 LFAPKCNGCSQPIT-------SNFITALGTHWHPDCFVCQHCGV 325
Score = 151 (58.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 46/158 (29%), Positives = 66/158 (41%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
G C CG+ + G Q A+G ++H + CC CG L + F+ +GR +CEEDY ++
Sbjct: 174 GDCAACGKPIIG--QVVIALGKMWHPEHYTCCECGAELGQRPFFERNGRAFCEEDY-HNQ 230
Query: 377 FQQTAEKC--AICGHLIMEMYSGFQQTAEKCAICGHLIMEM-ILQAMGKSY-HPGCFRCC 432
F + C AI + M F CA C E + G++Y FR
Sbjct: 231 FSPKCQGCHRAITDRCVSVMNKNFHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFRLF 290
Query: 433 L--CNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAAC 468
CN C P T N I + + + P C C
Sbjct: 291 APKCNGCSQ--PIT---SNFITALGTH---WHPDCFVC 320
Score = 134 (52.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/115 (25%), Positives = 51/115 (44%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C+ C + +T A+G +H +CF+C CG + G +F+ +G CE Y +
Sbjct: 294 CNGCSQPITS--NFITALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPLCERHY-HESRG 350
Query: 379 QTAEKC--AICGHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRC 431
+C AI G + M F +C+ C H + + + + + P C +C
Sbjct: 351 SICSQCRGAINGRCVAAMGRKFHPEHFRCSYCNHQLTKGTFKEVDR--RPFCHKC 403
Score = 128 (50.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 36/129 (27%), Positives = 52/129 (40%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
F+ A KC C I + A+G +HP CF C C +G F + + C Y
Sbjct: 287 FRLFAPKCNGCSQPITSNFITALGTHWHPDCFVCQHCGVSFNGASF-FEHNGAPLCERHY 345
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQ 517
H C+ C +G + G V +M + FH + + C C QLT K +
Sbjct: 346 HESRGSICSQC-RGA--INGR----CVAAMGRKFHPEHFRCSYCNHQLTKGTFKE---VD 395
Query: 518 GRLMCRACH 526
R C C+
Sbjct: 396 RRPFCHKCY 404
Score = 41 (19.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 176 RDYPPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVP 235
+DY + +YEN LN P P V + + + PP+ RA++ P
Sbjct: 78 KDYSKSQER-IYENESRLNPPVYSRPSV-------QSLLSQVEEPPI--RASSSRKSLGP 127
Query: 236 VKTATSLS 243
A S S
Sbjct: 128 PSQAQSYS 135
>UNIPROTKB|Q09476 [details] [associations]
symbol:pxl-1 "Paxillin homolog 1" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0009792 GO:GO:0040007 GO:GO:0040010
GO:GO:0031430 GO:GO:0002119 GO:GO:0046872 GO:GO:0055120
GO:GO:0008270 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0043050 GO:GO:0005912 GO:GO:0002102 EMBL:FO080703
eggNOG:NOG267887 HOGENOM:HOG000018764 KO:K05760 EMBL:EU239658
EMBL:EU239659 EMBL:EU239660 PIR:E88469 RefSeq:NP_001021185.2
RefSeq:NP_001021186.1 RefSeq:NP_001122677.1 UniGene:Cel.10786
ProteinModelPortal:Q09476 SMR:Q09476 DIP:DIP-27019N
MINT:MINT-1059336 STRING:Q09476 PaxDb:Q09476 PRIDE:Q09476
EnsemblMetazoa:C28H8.6a GeneID:175831 KEGG:cel:CELE_C28H8.6
CTD:175831 WormBase:C28H8.6a WormBase:C28H8.6b WormBase:C28H8.6c
InParanoid:A7YEM2 OMA:CIVGKMI NextBio:889850 GO:GO:0061061
Uniprot:Q09476
Length = 413
Score = 195 (73.7 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 36/97 (37%), Positives = 55/97 (56%)
Query: 405 CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPK 464
CA CG I+ ++ A+GK +HP + CC C L PF + + + +C DYH F+PK
Sbjct: 176 CAACGKPIIGQVVIALGKMWHPEHYTCCECGAELGQRPF-FERNGRAFCEEDYHNQFSPK 234
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
C C + IT + V V M+K+FH++C+ C +C
Sbjct: 235 CQGCHRAIT-----DRCVSV--MNKNFHIECFTCAEC 264
Score = 165 (63.1 bits), Expect = 3.8e-09, Sum P(2) = 3.8e-09
Identities = 32/104 (30%), Positives = 53/104 (50%)
Query: 400 QTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
Q + KC C I + + M K++H CF C CN+ F + + + YC D+ R
Sbjct: 230 QFSPKCQGCHRAITDRCVSVMNKNFHIECFTCAECNQPFGEDGFH-EKNGQTYCKRDFFR 288
Query: 460 MFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGL 503
+FAPKC C + IT + + ++ +H DC++C+ CG+
Sbjct: 289 LFAPKCNGCSQPIT-------SNFITALGTHWHPDCFVCQHCGV 325
Score = 151 (58.2 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 46/158 (29%), Positives = 66/158 (41%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
G C CG+ + G Q A+G ++H + CC CG L + F+ +GR +CEEDY ++
Sbjct: 174 GDCAACGKPIIG--QVVIALGKMWHPEHYTCCECGAELGQRPFFERNGRAFCEEDY-HNQ 230
Query: 377 FQQTAEKC--AICGHLIMEMYSGFQQTAEKCAICGHLIMEM-ILQAMGKSY-HPGCFRCC 432
F + C AI + M F CA C E + G++Y FR
Sbjct: 231 FSPKCQGCHRAITDRCVSVMNKNFHIECFTCAECNQPFGEDGFHEKNGQTYCKRDFFRLF 290
Query: 433 L--CNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAAC 468
CN C P T N I + + + P C C
Sbjct: 291 APKCNGCSQ--PIT---SNFITALGTH---WHPDCFVC 320
Score = 134 (52.2 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 29/115 (25%), Positives = 51/115 (44%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C+ C + +T A+G +H +CF+C CG + G +F+ +G CE Y +
Sbjct: 294 CNGCSQPITS--NFITALGTHWHPDCFVCQHCGVSFNGASFFEHNGAPLCERHY-HESRG 350
Query: 379 QTAEKC--AICGHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRC 431
+C AI G + M F +C+ C H + + + + + P C +C
Sbjct: 351 SICSQCRGAINGRCVAAMGRKFHPEHFRCSYCNHQLTKGTFKEVDR--RPFCHKC 403
Score = 128 (50.1 bits), Expect = 5.3e-05, Sum P(2) = 5.3e-05
Identities = 36/129 (27%), Positives = 52/129 (40%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
F+ A KC C I + A+G +HP CF C C +G F + + C Y
Sbjct: 287 FRLFAPKCNGCSQPITSNFITALGTHWHPDCFVCQHCGVSFNGASF-FEHNGAPLCERHY 345
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQ 517
H C+ C +G + G V +M + FH + + C C QLT K +
Sbjct: 346 HESRGSICSQC-RGA--INGR----CVAAMGRKFHPEHFRCSYCNHQLTKGTFKE---VD 395
Query: 518 GRLMCRACH 526
R C C+
Sbjct: 396 RRPFCHKCY 404
Score = 41 (19.5 bits), Expect = 1.3e-12, Sum P(2) = 1.3e-12
Identities = 18/68 (26%), Positives = 27/68 (39%)
Query: 176 RDYPPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVP 235
+DY + +YEN LN P P V + + + PP+ RA++ P
Sbjct: 78 KDYSKSQER-IYENESRLNPPVYSRPSV-------QSLLSQVEEPPI--RASSSRKSLGP 127
Query: 236 VKTATSLS 243
A S S
Sbjct: 128 PSQAQSYS 135
>ZFIN|ZDB-GENE-030131-8356 [details] [associations]
symbol:zgc:63514 "zgc:63514" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-030131-8356 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HOVERGEN:HBG074526 EMBL:BC061449 IPI:IPI00810523
UniGene:Dr.4097 ProteinModelPortal:Q6P7Y2 SMR:Q6P7Y2
InParanoid:Q6P7Y2 ArrayExpress:Q6P7Y2 Uniprot:Q6P7Y2
Length = 290
Score = 189 (71.6 bits), Expect = 1.4e-12, P = 1.4e-12
Identities = 56/223 (25%), Positives = 91/223 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFI------CCSCGRALR-GKAFYNVHGRVYCEED 371
C C + CQ L NC+ C +CG+ + G V+ EE
Sbjct: 68 CSRCSRSLAKESFTCQEDA-LVCNNCYCNEFSSNCVACGKTVMPGSKRLEYEDCVWHEEC 126
Query: 372 YLYSGFQQTAEKCAICG----HLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPG 427
++ G +Q + + + Y G + A +CA C +++ + + +H
Sbjct: 127 FVCCGCEQPIGAQSFIPDKDEYYCVPCYEG--RFAPRCAHCKQTLVQGGVTYRDEPWHKE 184
Query: 428 CFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM 487
CF C C L G PFT ++ YCV + ++A KCAAC K P+ G E V
Sbjct: 185 CFLCTGCKVQLAGQPFTTQGEDP-YCVKCFSNLYAQKCAACEK---PITGFGEGKYVSFE 240
Query: 488 DKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLSHL 530
++ +H C+ C C L L +P ++C+ C+ L
Sbjct: 241 ERQWHKPCFKCSVCSLSLVGAG---FFPHGSMILCKGCNTKKL 280
>UNIPROTKB|Q14192 [details] [associations]
symbol:FHL2 "Four and a half LIM domains protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0030018 "Z disc" evidence=IEA] [GO:0031430 "M
band" evidence=IEA] [GO:0055014 "atrial cardiac muscle cell
development" evidence=IEA] [GO:0055015 "ventricular cardiac muscle
cell development" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0003713 "transcription coactivator
activity" evidence=NAS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0050681 "androgen
receptor binding" evidence=NAS] [GO:0030521 "androgen receptor
signaling pathway" evidence=NAS] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IDA] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0042802 "identical protein binding"
evidence=IPI] [GO:0009725 "response to hormone stimulus"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0005925
"focal adhesion" evidence=IDA] [GO:0015629 "actin cytoskeleton"
evidence=IDA] Pfam:PF00412 Reactome:REACT_111217 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0045893
GO:GO:0043066 GO:GO:0005654 GO:GO:0030521 GO:GO:0031430
GO:GO:0030018 GO:GO:0044281 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 GO:GO:0044255 GO:GO:0006351 GO:GO:0005925
Orphanet:154 GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0003713
GO:GO:0009725 Pathway_Interaction_DB:hdac_classiii_pathway
Pathway_Interaction_DB:ar_pathway GO:GO:0001649 GO:GO:0050681
GO:GO:0055015 GO:GO:0060347 eggNOG:NOG314122 HOVERGEN:HBG074526
HOGENOM:HOG000231075 CTD:2274 KO:K14380 OrthoDB:EOG4XKV7B
GO:GO:0055014 EMBL:L42176 EMBL:U29332 EMBL:AB038794 EMBL:DQ307067
EMBL:BC014397 EMBL:U60117 IPI:IPI00743342 PIR:JC6565
RefSeq:NP_001034581.1 RefSeq:NP_001441.4 RefSeq:NP_963849.1
RefSeq:NP_963851.2 UniGene:Hs.443687 PDB:1X4K PDB:1X4L PDB:2D8Z
PDBsum:1X4K PDBsum:1X4L PDBsum:2D8Z ProteinModelPortal:Q14192
SMR:Q14192 DIP:DIP-5980N IntAct:Q14192 MINT:MINT-120725
STRING:Q14192 PhosphoSite:Q14192 DMDM:116241364 UCD-2DPAGE:Q14192
PaxDb:Q14192 PRIDE:Q14192 DNASU:2274 Ensembl:ENST00000322142
Ensembl:ENST00000358129 Ensembl:ENST00000393352
Ensembl:ENST00000393353 Ensembl:ENST00000408995
Ensembl:ENST00000409177 Ensembl:ENST00000409807 GeneID:2274
KEGG:hsa:2274 UCSC:uc002tct.3 GeneCards:GC02M105974 HGNC:HGNC:3703
HPA:CAB008368 HPA:HPA005922 HPA:HPA006028 MIM:602633
neXtProt:NX_Q14192 PharmGKB:PA164 InParanoid:Q14192 ChiTaRS:FHL2
EvolutionaryTrace:Q14192 GenomeRNAi:2274 NextBio:9247
ArrayExpress:Q14192 Bgee:Q14192 CleanEx:HS_FHL2
Genevestigator:Q14192 GermOnline:ENSG00000115641 Uniprot:Q14192
Length = 279
Score = 148 (57.2 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
+Q A +C C I + + +H CF C C + L G FT D+ YC+N +
Sbjct: 156 KQHAMQCVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSGQRFTAR-DDFAYCLNCFC 214
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQL 505
++A KCA C P+ G T + ++ +H DC+ C+ C L L
Sbjct: 215 DLYAKKCAGC---TNPISGLGGTKYISFEERQWHNDCFNCKKCSLSL 258
Score = 133 (51.9 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 390 LIMEMYSGFQQTAEKCAICGHLIMEMI--LQAMGKSYHPGCFRCCLCNECLDGVPFTVDV 447
L + YS + + KC C IM ++ G S+H CF C C + + G +
Sbjct: 88 LCTDCYSN--EYSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPI-GTKSFIPK 144
Query: 448 DNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTD 507
DN+ +CV Y + A +C C K IT T V ++ +H +C++C C QL+
Sbjct: 145 DNQNFCVPCYEKQHAMQCVQCKKPIT-------TGGVTYREQPWHKECFVCTACRKQLSG 197
Query: 508 E 508
+
Sbjct: 198 Q 198
Score = 116 (45.9 bits), Expect = 0.00042, P = 0.00042
Identities = 36/135 (26%), Positives = 52/135 (38%)
Query: 402 AEKCAICGHLI-MEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
A C CG I + L + +H CF C C L PF D ++ C + Y
Sbjct: 37 ANTCEECGKPIGCDCKDLSYKDRHWHEACFHCSQCRNSLVDKPFAAKED-QLLCTDCYSN 95
Query: 460 MFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC----GLQLTDEPDKR--- 512
++ KC C K I P GT ++ +H C++C C G + D +
Sbjct: 96 EYSSKCQECKKTIMP--GTR---KMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFC 150
Query: 513 --CYPLQGRLMCRAC 525
CY Q + C C
Sbjct: 151 VPCYEKQHAMQCVQC 165
Score = 83 (34.3 bits), Expect = 2.1e-12, Sum P(2) = 2.1e-12
Identities = 28/95 (29%), Positives = 39/95 (41%)
Query: 319 CHTCGEKVTGAGQACQAMG---NLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYL-- 373
C CG+ + G C+ + +H CF C C +L K F ++ C + Y
Sbjct: 40 CEECGKPI---GCDCKDLSYKDRHWHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNE 96
Query: 374 YSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAIC 408
YS Q +K + G ME Y G E C IC
Sbjct: 97 YSSKCQECKKTIMPGTRKME-YKG-SSWHETCFIC 129
Score = 77 (32.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
Y C C + + + + G+ +H CFIC C + + K+F + +C Y
Sbjct: 97 YSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYE- 155
Query: 375 SGFQQTAEKCAIC 387
+Q A +C C
Sbjct: 156 ---KQHAMQCVQC 165
>ZFIN|ZDB-GENE-080219-41 [details] [associations]
symbol:ablim1a "actin binding LIM protein 1a"
species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128
Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089
SMART:SM00132 SMART:SM00153 ZFIN:ZDB-GENE-080219-41 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 EMBL:BX957309
EMBL:CT025885 IPI:IPI00498122 Ensembl:ENSDART00000084416
ArrayExpress:F1Q5C0 Bgee:F1Q5C0 Uniprot:F1Q5C0
Length = 695
Score = 197 (74.4 bits), Expect = 2.5e-12, P = 2.5e-12
Identities = 64/223 (28%), Positives = 91/223 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C+ CGE V G + A+G YH CF+C C R +G+ C Y
Sbjct: 109 CNICGEFVEG--EVVTALGKTYHPTCFVCTICKRPFPAGDRVTFNGKD-CLCQYCAEPMS 165
Query: 379 QTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNEC 437
K + G Y ++ ++ CA CG I L A+ + +H GCF+C C +
Sbjct: 166 PGPTKDVV-GP--SSEYE--KKNSKSCAGCGRDIKNGQALLALERQWHLGCFKCKACAKV 220
Query: 438 LDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCY 496
L G + D +C DY F +C AC + IT G +V+ DK +H C
Sbjct: 221 LTGE--YISKDGAPFCERDYQLQFGVQCEACQQFIT---G-----KVLEAGDKHYHPSCA 270
Query: 497 MCEDCGLQLTDEPDKRCYPLQGRLMCR-ACHLSHLSRHHQSPT 538
C C T+ + Y LQG + +C S Q PT
Sbjct: 271 RCSRCNQMFTE--GEEMY-LQGSTVWHPSCKHSPRGEERQRPT 310
Score = 167 (63.8 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 58/219 (26%), Positives = 93/219 (42%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C CGE G + + +H CF C CG L F+ +G C DY
Sbjct: 50 CAKCGELCKG--EVLRVQAKHFHIKCFTCKVCGCDLAQGGFFMKNGEYLCTLDY--QRIH 105
Query: 379 QTAEKCAICGHLIM-EMYSGFQQTAEK-CAICGHLIMEMILQAMGKSYHPGCFRCCLCNE 436
T +C ICG + E+ + +T C +C I + A + G + CLC
Sbjct: 106 GT--RCNICGEFVEGEVVTALGKTYHPTCFVC--TICKRPFPAGDRVTFNG--KDCLCQY 159
Query: 437 CLDGV-PF-TVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVD 494
C + + P T DV + ++Y + + CA CG+ I + ++++++ +H+
Sbjct: 160 CAEPMSPGPTKDV---VGPSSEYEKKNSKSCAGCGRDIKNGQA------LLALERQWHLG 210
Query: 495 CYMCEDCGLQLTDE---PD-----KRCYPLQGRLMCRAC 525
C+ C+ C LT E D +R Y LQ + C AC
Sbjct: 211 CFKCKACAKVLTGEYISKDGAPFCERDYQLQFGVQCEAC 249
Score = 141 (54.7 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 39/132 (29%), Positives = 58/132 (43%)
Query: 374 YSGFQQTAEKCAICGHL-IMEMYSGFQQTAE---KCAICGHLIMEMILQAMGKSYHPGCF 429
Y G A+K C L + QT + +CA CG L +L+ K +H CF
Sbjct: 15 YDGLCNYAQKITSCFGLDVAHTQESHHQTEKPLIRCAKCGELCKGEVLRVQAKHFHIKCF 74
Query: 430 RCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDK 489
C +C L F + + + C DY R+ +C CG+ VEG E V ++ K
Sbjct: 75 TCKVCGCDLAQGGFFMK-NGEYLCTLDYQRIHGTRCNICGEF---VEG--EVV--TALGK 126
Query: 490 DFHVDCYMCEDC 501
+H C++C C
Sbjct: 127 TYHPTCFVCTIC 138
>ZFIN|ZDB-GENE-040822-3 [details] [associations]
symbol:zgc:92375 "zgc:92375" species:7955 "Danio
rerio" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-040822-3 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 eggNOG:NOG314122
HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 KO:K14380 EMBL:CU928217 EMBL:BC079524
IPI:IPI00485856 RefSeq:NP_001004112.1 UniGene:Dr.34223 SMR:Q68FN5
Ensembl:ENSDART00000010496 GeneID:445475 KEGG:dre:445475
InParanoid:Q68FN5 OMA:ERQWHSE OrthoDB:EOG4H4646 NextBio:20832144
Uniprot:Q68FN5
Length = 280
Score = 161 (61.7 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 55/216 (25%), Positives = 89/216 (41%)
Query: 319 CHTCGEKVTGAG-------QAC-QAMGNLYHTNCFIC-----CSC-GRALRGKAFY-NVH 363
CH C + + G Q C + NL+ C +C C+C + + + ++ N
Sbjct: 8 CHYCKDTLLGKKYILKEDTQYCTKCYENLFANCCEVCSLPIGCNCKDLSYKDRHWHENCF 67
Query: 364 GRVYCEEDYLYSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIM--EMILQAMG 421
C + F ++ +C E YS + + KC+ C +M ++ G
Sbjct: 68 KCAKCSRSLVDKPFA-AKDELMLC----TECYS--HEYSSKCSTCKKTVMPGSRKMEYKG 120
Query: 422 KSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEET 481
S+H CF C C + + G + DN +CV + + FA +C AC K IT T
Sbjct: 121 NSWHETCFLCQRCQQPI-GTKSFIPKDNNYFCVPCFEKQFAYQCCACKKAIT-------T 172
Query: 482 VRVVSMDKDFHVDCYMCEDCGLQLTDE--PDKRCYP 515
V DK +H +C+ C C QL + + YP
Sbjct: 173 GGVTYHDKPWHRECFTCIGCKRQLAGQRFTSRENYP 208
Score = 144 (55.7 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 32/108 (29%), Positives = 51/108 (47%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
+Q A +C C I + K +H CF C C L G FT +N YC++ +
Sbjct: 157 KQFAYQCCACKKAITTGGVTYHDKPWHRECFTCIGCKRQLAGQRFT-SRENYPYCLDCFS 215
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMD-KDFHVDCYMCEDCGLQL 505
++A KC C K IT + G + +S + + +H +C+ C C + L
Sbjct: 216 NLYAKKCVGCTKAITSLAGA----KYISFEERQWHSECFTCMQCSVSL 259
Score = 87 (35.7 bits), Expect = 2.5e-12, Sum P(2) = 2.5e-12
Identities = 19/73 (26%), Positives = 31/73 (42%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
Y C TC + V + + GN +H CF+C C + + K+F +C +
Sbjct: 98 YSSKCSTCKKTVMPGSRKMEYKGNSWHETCFLCQRCQQPIGTKSFIPKDNNYFCVPCFE- 156
Query: 375 SGFQQTAEKCAIC 387
+Q A +C C
Sbjct: 157 ---KQFAYQCCAC 166
>FB|FBgn0013751 [details] [associations]
symbol:Awh "Arrowhead" species:7227 "Drosophila melanogaster"
[GO:0007444 "imaginal disc development" evidence=IMP] [GO:0005634
"nucleus" evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
EMBL:AE014296 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007444 EMBL:U82539 EMBL:AY071197
EMBL:BT025230 RefSeq:NP_523907.2 RefSeq:NP_728906.1 UniGene:Dm.6063
ProteinModelPortal:Q8IRC7 SMR:Q8IRC7 PRIDE:Q8IRC7
EnsemblMetazoa:FBtr0073156 GeneID:38451 KEGG:dme:Dmel_CG1072
UCSC:CG1072-RA CTD:38451 FlyBase:FBgn0013751 eggNOG:NOG264882
GeneTree:ENSGT00700000104050 HOGENOM:HOG000214908 InParanoid:Q8IRC7
OMA:IHDRYLL OrthoDB:EOG42BVRJ PhylomeDB:Q8IRC7 GenomeRNAi:38451
NextBio:808729 Bgee:Q8IRC7 GermOnline:CG1072 Uniprot:Q8IRC7
Length = 275
Score = 183 (69.5 bits), Expect = 5.1e-12, P = 5.1e-12
Identities = 39/124 (31%), Positives = 63/124 (50%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA CG I + L+ G S+H C RCC+C LD + ++YC DY + F
Sbjct: 8 CAACGEPISDRFFLEVGGCSWHAHCLRCCMCMCPLDRQQSCFIRERQVYCKADYSKNFGA 67
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCR 523
KC+ C +GI+ + +V FH+ C+ C+ CG QL+ ++ + R++C+
Sbjct: 68 KCSKCCRGISASDWVRRARELV-----FHLACFACDQCGRQLST--GEQFALMDDRVLCK 120
Query: 524 ACHL 527
A +L
Sbjct: 121 AHYL 124
>ZFIN|ZDB-GENE-041010-121 [details] [associations]
symbol:fhl2b "four and a half LIM domains 2b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-041010-121 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HOVERGEN:HBG074526 EMBL:BC083393 IPI:IPI01027906
UniGene:Dr.152492 ProteinModelPortal:Q5XJB1 SMR:Q5XJB1
InParanoid:Q5XJB1 Uniprot:Q5XJB1
Length = 279
Score = 156 (60.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 40/121 (33%), Positives = 56/121 (46%)
Query: 390 LIMEMYSGFQQTAEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDV 447
L E YS + + KC C IM ++ G S+H CF C C + + G +
Sbjct: 88 LCTECYSN--EYSSKCFECKKTIMPGSRKMEHKGNSWHETCFTCQRCQQPI-GTKSFIPE 144
Query: 448 DNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTD 507
DN YCV Y + FA +C C K IT T V D+ +H DC++C C QL+
Sbjct: 145 DNSNYCVPCYEKQFALQCVQCKKPIT-------TGGVTYHDQPWHKDCFLCTGCKQQLSG 197
Query: 508 E 508
+
Sbjct: 198 Q 198
Score = 148 (57.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 33/107 (30%), Positives = 53/107 (49%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
+Q A +C C I + + +H CF C C + L G FT D+ YC+N +
Sbjct: 156 KQFALQCVQCKKPITTGGVTYHDQPWHKDCFLCTGCKQQLSGQRFT-SRDDFPYCLNCFC 214
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQL 505
++A KCAAC TP+ G + + ++ +H DC+ C+ C + L
Sbjct: 215 NLYAKKCAAC---TTPISGLGGSKYISFEERQWHNDCFNCKKCSVSL 258
Score = 119 (46.9 bits), Expect = 0.00019, P = 0.00019
Identities = 41/175 (23%), Positives = 66/175 (37%)
Query: 360 YNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIMEMILQA 419
Y+ H YC+E L+ ++ C +YS + +K C L
Sbjct: 5 YDCH---YCKES-LFGKKYVLRDENPYCVKCYESLYSNTCEECKKPIGCN----SRDLSY 56
Query: 420 MGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTE 479
+ +H CF C C+ L PF+ D ++ C Y ++ KC C K I P G+
Sbjct: 57 KDRHWHDDCFHCFKCHRSLVDKPFSTK-DEQLLCTECYSNEYSSKCFECKKTIMP--GSR 113
Query: 480 ETVRVVSMDKDFHVDCYMCEDCGLQLTDE---PDKR------CYPLQGRLMCRAC 525
++ +H C+ C+ C + + P+ CY Q L C C
Sbjct: 114 ---KMEHKGNSWHETCFTCQRCQQPIGTKSFIPEDNSNYCVPCYEKQFALQCVQC 165
Score = 77 (32.2 bits), Expect = 8.8e-12, Sum P(2) = 8.8e-12
Identities = 21/78 (26%), Positives = 31/78 (39%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
Y C C + + + +H +CF C C R+L K F ++ C E Y
Sbjct: 36 YSNTCEECKKPIGCNSRDLSYKDRHWHDDCFHCFKCHRSLVDKPFSTKDEQLLCTE--CY 93
Query: 375 SGFQQTAEKCAICGHLIM 392
S + + KC C IM
Sbjct: 94 SN--EYSSKCFECKKTIM 109
>UNIPROTKB|J3KNW4 [details] [associations]
symbol:FHL2 "Four and a half LIM domains protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:AC012360 OMA:QECKKTI HGNC:HGNC:3703
ChiTaRS:FHL2 EMBL:AC068273 EMBL:AC108058 ProteinModelPortal:J3KNW4
Ensembl:ENST00000344213 Uniprot:J3KNW4
Length = 389
Score = 148 (57.2 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 33/107 (30%), Positives = 51/107 (47%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
+Q A +C C I + + +H CF C C + L G FT D+ YC+N +
Sbjct: 266 KQHAMQCVQCKKPITTGGVTYREQPWHKECFVCTACRKQLSGQRFTAR-DDFAYCLNCFC 324
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQL 505
++A KCA C P+ G T + ++ +H DC+ C+ C L L
Sbjct: 325 DLYAKKCAGC---TNPISGLGGTKYISFEERQWHNDCFNCKKCSLSL 368
Score = 133 (51.9 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/121 (28%), Positives = 56/121 (46%)
Query: 390 LIMEMYSGFQQTAEKCAICGHLIMEMI--LQAMGKSYHPGCFRCCLCNECLDGVPFTVDV 447
L + YS + + KC C IM ++ G S+H CF C C + + G +
Sbjct: 198 LCTDCYSN--EYSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPI-GTKSFIPK 254
Query: 448 DNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTD 507
DN+ +CV Y + A +C C K IT T V ++ +H +C++C C QL+
Sbjct: 255 DNQNFCVPCYEKQHAMQCVQCKKPIT-------TGGVTYREQPWHKECFVCTACRKQLSG 307
Query: 508 E 508
+
Sbjct: 308 Q 308
Score = 116 (45.9 bits), Expect = 0.00081, P = 0.00081
Identities = 36/135 (26%), Positives = 52/135 (38%)
Query: 402 AEKCAICGHLI-MEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
A C CG I + L + +H CF C C L PF D ++ C + Y
Sbjct: 147 ANTCEECGKPIGCDCKDLSYKDRHWHEACFHCSQCRNSLVDKPFAAKED-QLLCTDCYSN 205
Query: 460 MFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC----GLQLTDEPDKR--- 512
++ KC C K I P GT ++ +H C++C C G + D +
Sbjct: 206 EYSSKCQECKKTIMP--GTR---KMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFC 260
Query: 513 --CYPLQGRLMCRAC 525
CY Q + C C
Sbjct: 261 VPCYEKQHAMQCVQC 275
Score = 83 (34.3 bits), Expect = 1.2e-11, Sum P(2) = 1.2e-11
Identities = 28/95 (29%), Positives = 39/95 (41%)
Query: 319 CHTCGEKVTGAGQACQAMG---NLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYL-- 373
C CG+ + G C+ + +H CF C C +L K F ++ C + Y
Sbjct: 150 CEECGKPI---GCDCKDLSYKDRHWHEACFHCSQCRNSLVDKPFAAKEDQLLCTDCYSNE 206
Query: 374 YSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAIC 408
YS Q +K + G ME Y G E C IC
Sbjct: 207 YSSKCQECKKTIMPGTRKME-YKG-SSWHETCFIC 239
Score = 77 (32.2 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 18/73 (24%), Positives = 31/73 (42%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
Y C C + + + + G+ +H CFIC C + + K+F + +C Y
Sbjct: 207 YSSKCQECKKTIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDNQNFCVPCYE- 265
Query: 375 SGFQQTAEKCAIC 387
+Q A +C C
Sbjct: 266 ---KQHAMQCVQC 275
>RGD|1307056 [details] [associations]
symbol:Fhl5 "four and a half LIM domains 5" species:10116
"Rattus norvegicus" [GO:0003713 "transcription coactivator
activity" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 RGD:1307056 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0003713
eggNOG:NOG314122 HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 OrthoDB:EOG4XKV7B CTD:9457 OMA:YCVSCYD
EMBL:BC079327 IPI:IPI00555203 RefSeq:NP_001013106.1
UniGene:Rn.109490 ProteinModelPortal:Q6AXT1 SMR:Q6AXT1
Ensembl:ENSRNOT00000046595 GeneID:297954 KEGG:rno:297954
UCSC:RGD:1307056 InParanoid:Q6AXT1 NextBio:642879
Genevestigator:Q6AXT1 Uniprot:Q6AXT1
Length = 284
Score = 145 (56.1 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 35/128 (27%), Positives = 61/128 (47%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
++ A C C +I + + +H CF C C + L F + D+ +C++ Y+
Sbjct: 157 KEFAHYCNFCKKVITSGGITFRDQIWHKECFLCSGCRKELYEEAF-MSKDDFPFCLDCYN 215
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
++A KCAAC K IT + G + + D+ +H +C+ C C + L E + Q
Sbjct: 216 HLYAKKCAACTKPITGLRGAKF---ICFQDRQWHSECFNCGKCSVSLVGEG----FLTQN 268
Query: 519 -RLMCRAC 525
++CR C
Sbjct: 269 MEILCRKC 276
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 41/145 (28%), Positives = 64/145 (44%)
Query: 390 LIMEMYSGFQQTAEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDV 447
L + YS + + KC C IM ++ G +H CF C C + + P +
Sbjct: 89 LCTDCYSN--ECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCEHCRQPIGTKPL-ISK 145
Query: 448 DNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTD 507
++ YCV + + FA C C K IT G T R D+ +H +C++C C +L +
Sbjct: 146 ESGNYCVPCFEKEFAHYCNFCKKVITS-GGI--TFR----DQIWHKECFLCSGCRKELYE 198
Query: 508 EP--DKRCYPLQGRLMCRACHLSHL 530
E K +P C C+ +HL
Sbjct: 199 EAFMSKDDFPF-----CLDCY-NHL 217
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 26/88 (29%), Positives = 42/88 (47%)
Query: 422 KSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEET 481
+ +H GCFRC C+ L PF V D ++ C + Y + KC C + I P G+
Sbjct: 60 RHWHEGCFRCNKCHHSLVEKPF-VAKDERLLCTDCYSNECSSKCFHCKRTIMP--GSR-- 114
Query: 482 VRVVSMDKDFHVDCYMCEDCGLQLTDEP 509
++ +H C++CE C + +P
Sbjct: 115 -KMEFKGNYWHETCFVCEHCRQPIGTKP 141
Score = 79 (32.9 bits), Expect = 1.4e-11, Sum P(2) = 1.4e-11
Identities = 25/96 (26%), Positives = 35/96 (36%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C E + + +H CF C C +L K F R+ C + YS
Sbjct: 41 CEQCKEPIESDSKDLCYKNRHWHEGCFRCNKCHHSLVEKPFVAKDERLLCTD--CYSN-- 96
Query: 379 QTAEKCAICGHLIM----EMYSGFQQTAEKCAICGH 410
+ + KC C IM +M E C +C H
Sbjct: 97 ECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCEH 132
>MGI|MGI:1913192 [details] [associations]
symbol:Fhl5 "four and a half LIM domains 5" species:10090
"Mus musculus" [GO:0003713 "transcription coactivator activity"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=TAS] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI] [GO:0046872 "metal
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 MGI:MGI:1913192
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 GO:GO:0045944
GO:GO:0006351 Gene3D:2.10.110.10 GO:GO:0003713 eggNOG:NOG314122
HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 OrthoDB:EOG4XKV7B CTD:9457 OMA:YCVSCYD
EMBL:AF083394 EMBL:AK006414 EMBL:BC048473 IPI:IPI00124049
RefSeq:NP_067293.1 UniGene:Mm.87325 ProteinModelPortal:Q9WTX7
SMR:Q9WTX7 MINT:MINT-1341882 STRING:Q9WTX7 PhosphoSite:Q9WTX7
PRIDE:Q9WTX7 Ensembl:ENSMUST00000029922 Ensembl:ENSMUST00000108204
GeneID:57756 KEGG:mmu:57756 InParanoid:Q9WTX7 ChiTaRS:FHL5
NextBio:313924 Bgee:Q9WTX7 CleanEx:MM_FHL5 Genevestigator:Q9WTX7
GermOnline:ENSMUSG00000028259 Uniprot:Q9WTX7
Length = 284
Score = 144 (55.7 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 34/127 (26%), Positives = 62/127 (48%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
++ A C C +I + + +H CF C C + L F + D+ +C++ Y+
Sbjct: 157 KEFAHYCNFCKKVITSGGITFRDQIWHKECFLCSGCRKELYEEAF-MSKDDFPFCLDCYN 215
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
++A KCAAC K IT + G + + D+ +H +C+ C C + L E + ++
Sbjct: 216 HLYAKKCAACTKPITGLRGAKF---ICFQDRQWHSECFNCGKCSVSLVGE-GFLTHNME- 270
Query: 519 RLMCRAC 525
++CR C
Sbjct: 271 -ILCRKC 276
Score = 117 (46.2 bits), Expect = 0.00034, P = 0.00034
Identities = 41/145 (28%), Positives = 64/145 (44%)
Query: 390 LIMEMYSGFQQTAEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDV 447
L + YS + + KC C IM ++ G +H CF C C + + P +
Sbjct: 89 LCTDCYSN--ECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCEHCRQPIGTKPL-ISK 145
Query: 448 DNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTD 507
++ YCV + + FA C C K IT G T R D+ +H +C++C C +L +
Sbjct: 146 ESGNYCVPCFEKEFAHYCNFCKKVITS-GGI--TFR----DQIWHKECFLCSGCRKELYE 198
Query: 508 EP--DKRCYPLQGRLMCRACHLSHL 530
E K +P C C+ +HL
Sbjct: 199 EAFMSKDDFPF-----CLDCY-NHL 217
Score = 116 (45.9 bits), Expect = 0.00044, P = 0.00044
Identities = 26/88 (29%), Positives = 43/88 (48%)
Query: 422 KSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEET 481
+ +H GCFRC C+ L PF V D+++ C + Y + KC C + I P G+
Sbjct: 60 RHWHEGCFRCNKCHHSLVEKPF-VAKDDRLLCTDCYSNECSSKCFHCKRTIMP--GSR-- 114
Query: 482 VRVVSMDKDFHVDCYMCEDCGLQLTDEP 509
++ +H C++CE C + +P
Sbjct: 115 -KMEFKGNYWHETCFVCEHCRQPIGTKP 141
Score = 115 (45.5 bits), Expect = 0.00057, P = 0.00057
Identities = 27/103 (26%), Positives = 47/103 (45%)
Query: 429 FRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMD 488
F C C L G + + DN +YC++ Y R+F+ C C + P+E + + +
Sbjct: 6 FDCQYCTSSLIGKKYVLKDDN-LYCISCYDRIFSNYCEQCKE---PIESDSKDL--CYKN 59
Query: 489 KDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLSHLS 531
+ +H C+ C C L ++P RL+C C+ + S
Sbjct: 60 RHWHEGCFRCNKCHHSLVEKP---FVAKDDRLLCTDCYSNECS 99
Score = 80 (33.2 bits), Expect = 1.5e-11, Sum P(2) = 1.5e-11
Identities = 25/96 (26%), Positives = 35/96 (36%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C E + + +H CF C C +L K F R+ C + YS
Sbjct: 41 CEQCKEPIESDSKDLCYKNRHWHEGCFRCNKCHHSLVEKPFVAKDDRLLCTD--CYSN-- 96
Query: 379 QTAEKCAICGHLIM----EMYSGFQQTAEKCAICGH 410
+ + KC C IM +M E C +C H
Sbjct: 97 ECSSKCFHCKRTIMPGSRKMEFKGNYWHETCFVCEH 132
>ASPGD|ASPL0000012160 [details] [associations]
symbol:AN3659 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 EMBL:BN001302 EnsemblFungi:CADANIAT00005076
HOGENOM:HOG000191957 OMA:RFYCHLD Uniprot:C8V3V1
Length = 776
Score = 189 (71.6 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 57/202 (28%), Positives = 86/202 (42%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C + AG+ A G +H CF C C AL AFY E
Sbjct: 559 CEACSLPI--AGKVVTAAGTRFHPECFTCYHCHTALECVAFYQ-EPEAKRNERLADPSAD 615
Query: 379 QTAEKCAICGHL-IMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNEC 437
+ A HL E++S +C C I ++ A G +H G F C C +
Sbjct: 616 EDAHSLRFYCHLDFHELFS------PRCKSCKTPIEGEVVVACGAEWHVGHFFCAECGDP 669
Query: 438 LDG-VPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCY 496
+ PF V+ D +C+N + R AP+CA C K PV ++ V + ++ +H +C+
Sbjct: 670 FNSQTPF-VEKDGYAWCLNCHSRRTAPQCAGCKK---PV--LDDIV-ITAVGGKWHENCF 722
Query: 497 MCEDCGLQLTDEPDKRCYPLQG 518
+C +CG PD R + +G
Sbjct: 723 VCHECGNGFG--PDGRYFVKEG 742
Score = 45 (20.9 bits), Expect = 2.6e-11, Sum P(2) = 2.6e-11
Identities = 9/31 (29%), Positives = 18/31 (58%)
Query: 171 GLKYIRDYPPYEAPPVY--ENIQELNKPPKP 199
GL++ Y PY P + +N ++ ++P +P
Sbjct: 202 GLQFKNPYAPYRNPDIKKPQNSEKQSQPYEP 232
>DICTYBASE|DDB_G0284863 [details] [associations]
symbol:limB "LIM-type zinc finger-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0031154 "culmination
involved in sorocarp development" evidence=IMP] [GO:0031152
"aggregation involved in sorocarp development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA;ISS] [GO:0007155 "cell
adhesion" evidence=IMP] [GO:0006935 "chemotaxis" evidence=IEA;IMP]
[GO:0005938 "cell cortex" evidence=IEA;IDA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
dictyBase:DDB_G0284863 GO:GO:0005938 GenomeReviews:CM000153_GR
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 GO:GO:0007155
EMBL:AAFI02000073 GO:GO:0006935 Gene3D:2.10.110.10 GO:GO:0031154
GO:GO:0031152 eggNOG:NOG263350 EMBL:AF198250 RefSeq:XP_639953.1
HSSP:P48059 ProteinModelPortal:Q54NW4 EnsemblProtists:DDB0191245
GeneID:8624865 KEGG:ddi:DDB_G0284863 OMA:YCENDYL
ProtClustDB:CLSZ2728995 Uniprot:Q54NW4
Length = 553
Score = 186 (70.5 bits), Expect = 2.8e-11, P = 2.8e-11
Identities = 56/197 (28%), Positives = 86/197 (43%)
Query: 337 GNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYL-------YSG-FQQTAEKCAICG 388
G + N IC +CG + G N GR Y E ++ +SG F + EK C
Sbjct: 197 GRVVKANGPICGACGDMIIGVCT-NALGRSYHPEHFVCTYCKLPFSGSFIEHEEKL-YCE 254
Query: 389 HLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
+ +E++S +C C I + + A+G YHP CF C C + L G P+ + D
Sbjct: 255 NDYLELFS------PRCFACIKPIEDTCINALGNRYHPECFSCSGCGDKLRGKPYKEE-D 307
Query: 449 NKIYCVN---DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQL 505
++YC + A K C K P+ G ++ + H + Y CE+CG +
Sbjct: 308 GEVYCNTCKIARQKRLAAKSEICSKCKLPITGEY----IILQGQPVHSEHYRCEECGCEF 363
Query: 506 TDEPDKRCYPLQGRLMC 522
K C+ +GRL C
Sbjct: 364 N--VGKTCHEYEGRLYC 378
Score = 137 (53.3 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 59/225 (26%), Positives = 80/225 (35%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFI------------CCSCGRALRGKAFY----NV 362
C CG+K+ G + G +Y C I C C + G+ V
Sbjct: 291 CSGCGDKLRGKPYK-EEDGEVYCNTCKIARQKRLAAKSEICSKCKLPITGEYIILQGQPV 349
Query: 363 HGRVY-CEEDYLYSGFQQTAEKCAICGHLIMEMYSGFQ-QTAEKCAICGHLIMEMILQAM 420
H Y CEE +T + G L Y +Q Q C C I+ + A+
Sbjct: 350 HSEHYRCEECGCEFNVGKTCHEYE--GRLYC--YEDYQKQILNICGACSKPIVGRSITAL 405
Query: 421 GKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEE 480
GK +HP F C C G F K YC + YH+ F +C C K PV T
Sbjct: 406 GKVWHPEHFTCTTCQVPFAGSAFREHA-GKPYCESHYHQFFGRQCFKCSK---PVVDTGV 461
Query: 481 TVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRAC 525
V K +H + + C C L K G+ +C C
Sbjct: 462 EV----FGKIYHREHFTCTGCECVL----GKEIMEWDGKPLCFKC 498
>UNIPROTKB|F1SV27 [details] [associations]
symbol:FHL3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 OMA:QFTSRDD EMBL:CR956649
EMBL:FP102603 RefSeq:XP_003127846.1 Ensembl:ENSSSCT00000004040
Ensembl:ENSSSCT00000004043 GeneID:100512841 KEGG:ssc:100512841
Uniprot:F1SV27
Length = 280
Score = 176 (67.0 bits), Expect = 4.6e-11, P = 4.6e-11
Identities = 55/219 (25%), Positives = 89/219 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFI------CCSCGRALR-GKAFYNVHGRVYCEED 371
C C + CQ L +C+ C +CG + G G+ + E
Sbjct: 68 CCRCQRSLADEPFTCQD-SELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQTWHEHC 126
Query: 372 YLYSGFQQTAEKCAIC----GHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPG 427
+L SG +Q C+ H + Y + A +CA C + + + + +H
Sbjct: 127 FLCSGCEQPLGSCSFVPDKGAHYCVPCYEN--KFAPRCARCSKTLTQGGVTYRDQPWHRE 184
Query: 428 CFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM 487
C C C L G FT D+ YCV + +FAPKC++C + IT + G + VS
Sbjct: 185 CLVCTGCQTPLAGQQFT-SRDDDPYCVACFGELFAPKCSSCKRPITGLGGG----KYVSF 239
Query: 488 -DKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRAC 525
D+ +H C+ C C L + P +++C+ C
Sbjct: 240 EDRHWHHSCFSCARCSTSLVGQG---FVPDGDQVLCQGC 275
Score = 160 (61.4 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 38/132 (28%), Positives = 64/132 (48%)
Query: 398 FQQTAEKCA-ICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVND 456
F T +C + GH E+ + + +H GCFRCC C L PFT D+++ C +
Sbjct: 36 FANTCAECQQLIGHDSRELFYE--DRHFHEGCFRCCRCQRSLADEPFTCQ-DSELLCNDC 92
Query: 457 YHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC--Y 514
Y F+ +C+ACG+ + P G+ ++ + +H C++C C ++P C
Sbjct: 93 YCSAFSSQCSACGETVMP--GSR---KLEYGGQTWHEHCFLCSGC-----EQPLGSCSFV 142
Query: 515 PLQGRLMCRACH 526
P +G C C+
Sbjct: 143 PDKGAHYCVPCY 154
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/103 (33%), Positives = 46/103 (44%)
Query: 429 FRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMD 488
F C C+E L G + + DN YCV Y FA CA C + I G ++ + D
Sbjct: 5 FDCAKCSESLYGRKY-IQTDNGPYCVPCYDNTFANTCAECQQLI----G-HDSRELFYED 58
Query: 489 KDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLSHLS 531
+ FH C+ C C L DEP C L+C C+ S S
Sbjct: 59 RHFHEGCFRCCRCQRSLADEPFT-CQ--DSELLCNDCYCSAFS 98
>FB|FBgn0026411 [details] [associations]
symbol:Lim1 species:7227 "Drosophila melanogaster"
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0007480 "imaginal disc-derived leg morphogenesis"
evidence=IMP] [GO:0007479 "leg disc proximal/distal pattern
formation" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005525
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0046872
EMBL:AE014298 GO:GO:0043565 GO:GO:0008270 GO:GO:0003924
GO:GO:0006184 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0007480 GO:GO:0007479 FlyBase:FBgn0260444
HSSP:P06601 GeneTree:ENSGT00700000104177 eggNOG:NOG257130 KO:K09372
EMBL:AF181631 EMBL:AB034690 RefSeq:NP_572505.1 UniGene:Dm.3025
SMR:Q9V472 IntAct:Q9V472 MINT:MINT-756444 STRING:Q9V472
EnsemblMetazoa:FBtr0071279 GeneID:31813 KEGG:dme:Dmel_CG11354
UCSC:CG11354-RA CTD:31813 FlyBase:FBgn0026411 InParanoid:Q9V472
OMA:GARKMRG OrthoDB:EOG48W9H7 GenomeRNAi:31813 NextBio:775444
Uniprot:Q9V472
Length = 505
Score = 183 (69.5 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 41/127 (32%), Positives = 69/127 (54%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
+ CA C I++ +L + +++H C RCC C + L F+ + +K+YC ND+ R +
Sbjct: 25 DPCAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRE--SKLYCRNDFFRRY 82
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQ-GRL 520
KC+ CG+GI P + VR DK FH++C+ C C QL+ ++ Y L +
Sbjct: 83 GTKCSGCGQGIAP----SDLVRK-PRDKVFHLNCFTCCICRKQLST--GEQLYVLDDNKF 135
Query: 521 MCRACHL 527
+C+ +L
Sbjct: 136 ICKDDYL 142
Score = 120 (47.3 bits), Expect = 0.00044, P = 0.00044
Identities = 34/123 (27%), Positives = 50/123 (40%)
Query: 347 CCSCGRALRGKAFYNVHGRVYCEEDY-LYSGFQQTAEKCAICGHLIMEMYSGFQQTAEKC 405
C C + + K NV R + Q +KC + F++ KC
Sbjct: 27 CAGCNKPILDKFLLNVLERAWHASCVRCCECLQPLTDKCFSRESKLYCRNDFFRRYGTKC 86
Query: 406 AICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLD-GVPFTVDVDNKIYCVNDYHRMFA 462
+ CG I +++ + K +H CF CC+C + L G V DNK C +DY A
Sbjct: 87 SGCGQGIAPSDLVRKPRDKVFHLNCFTCCICRKQLSTGEQLYVLDDNKFICKDDYLLGKA 146
Query: 463 PKC 465
P C
Sbjct: 147 PSC 149
>ZFIN|ZDB-GENE-040426-1863 [details] [associations]
symbol:csrp2 "cysteine and glycine-rich protein 2"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-040426-1863 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:Q05158 GeneTree:ENSGT00550000074548
HOVERGEN:HBG051143 eggNOG:NOG281414 KO:K09377 HOGENOM:HOG000111233
OrthoDB:EOG4BRWMS CTD:1466 OMA:TQTEKDG EMBL:BX072538 EMBL:CT573050
EMBL:BC064303 IPI:IPI00496176 RefSeq:NP_957191.1 UniGene:Dr.70350
SMR:Q6P2T6 Ensembl:ENSDART00000019508 Ensembl:ENSDART00000132581
Ensembl:ENSDART00000134123 GeneID:393871 KEGG:dre:393871
InParanoid:Q6P2T6 NextBio:20814853 Uniprot:Q6P2T6
Length = 193
Score = 134 (52.2 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 30/72 (41%), Positives = 39/72 (54%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+EKCA CG + E I+ A GK +H CFRC C + L+ T + D +IYC Y +
Sbjct: 116 SEKCARCGDAVYAAEKIMSA-GKPWHKNCFRCAKCGKSLESTTQT-EKDGEIYCKACYAK 173
Query: 460 MFAPKCAACGKG 471
F PK CG G
Sbjct: 174 NFGPK--GCGYG 183
Score = 115 (45.5 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 24/69 (34%), Positives = 35/69 (50%)
Query: 404 KCAIC-GHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC C G + +Q GKS+H CF C +C + LD + D +IYC + Y + +
Sbjct: 9 KCCACNGTVYHAEEVQCDGKSFHKCCFLCMVCRKGLDSTTLAIH-DQEIYCKSCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 91 (37.1 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 20/65 (30%), Positives = 33/65 (50%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
KCA CG + E +++S K +H +C+ C CG L+ T + +K G +
Sbjct: 118 KCARCGDAVYAAE------KIMSAGKPWHKNCFRCAKCGKSLESTTQTEK-----DGEIY 166
Query: 522 CRACH 526
C+AC+
Sbjct: 167 CKACY 171
Score = 68 (29.0 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
Identities = 16/55 (29%), Positives = 24/55 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C C V A + Q G +H CF+C C + L +H + +YC+ Y
Sbjct: 10 CCACNGTVYHAEEV-QCDGKSFHKCCFLCMVCRKGLDSTTLA-IHDQEIYCKSCY 62
>UNIPROTKB|H0YM35 [details] [associations]
symbol:LHX2 "LIM/homeobox protein Lhx2" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000988
"protein binding transcription factor activity" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA]
[GO:0007498 "mesoderm development" evidence=IEA] [GO:0009953
"dorsal/ventral pattern formation" evidence=IEA] [GO:0021978
"telencephalon regionalization" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:2000678 "negative regulation of transcription
regulatory region DNA binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0007411 GO:GO:0007498 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 Gene3D:2.10.110.10
GO:GO:0001843 GO:GO:0009953 GO:GO:0021978 GO:GO:0000988
EMBL:AC006450 GO:GO:2000678 HGNC:HGNC:6594 ChiTaRS:LHX2
EMBL:AL158052 Ensembl:ENST00000560961 Bgee:H0YM35 Uniprot:H0YM35
Length = 147
Score = 160 (61.4 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 37/107 (34%), Positives = 53/107 (49%)
Query: 402 AEKCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
A CA CG I + L A+ K +H C +CC C L+ D IYC DY+R
Sbjct: 9 AALCAGCGGKISDRYYLLAVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDYYRR 68
Query: 461 FA-PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLT 506
F+ +CA C GI+ +E +R + D +H++C+ C C LT
Sbjct: 69 FSVQRCARCHLGIS---ASEMVMR--ARDLVYHLNCFTCTTCNKMLT 110
Score = 105 (42.0 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 24/74 (32%), Positives = 37/74 (50%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGK-AFYNVHGRVYCEEDYLYSG 376
+C CG K++ A+ +H C CC C L + ++ G +YC+EDY Y
Sbjct: 11 LCAGCGGKISDRYYLL-AVDKQWHMRCLKCCECKLNLESELTCFSKDGSIYCKEDY-YRR 68
Query: 377 FQQTAEKCAICGHL 390
F + ++CA C HL
Sbjct: 69 F--SVQRCARC-HL 79
Score = 88 (36.0 bits), Expect = 8.0e-11, Sum P(2) = 8.0e-11
Identities = 21/57 (36%), Positives = 31/57 (54%)
Query: 401 TAEKCAICGHL---IMEMILQAMGKSYHPGCFRCCLCNECLD-GVPFTVDVDNKIYC 453
+ ++CA C HL EM+++A YH CF C CN+ L G F + D+ +YC
Sbjct: 70 SVQRCARC-HLGISASEMVMRARDLVYHLNCFTCTTCNKMLTTGDHFGMK-DSLVYC 124
>UNIPROTKB|H0YKY2 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005622 "intracellular" evidence=IEA] [GO:0021520
"spinal cord motor neuron cell fate specification" evidence=IEA]
[GO:0021524 "visceral motor neuron differentiation" evidence=IEA]
[GO:0031290 "retinal ganglion cell axon guidance" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
GO:GO:0045665 GO:GO:0005622 Gene3D:2.10.110.10 GO:GO:0031290
EMBL:AC027243 GO:GO:0021520 GO:GO:0021524 HGNC:HGNC:18524
Ensembl:ENST00000558437 Bgee:H0YKY2 Uniprot:H0YKY2
Length = 145
Score = 160 (61.4 bits), Expect = 6.1e-11, P = 6.1e-11
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 405 CAICGHLIMEMILQAMGKS--YHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
C CG I + + + +H C +C C++ LD D K YC DY R+F
Sbjct: 2 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 61
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMC 522
KCA C G + ++ +R + D +H++C+ C C QL P + L+C
Sbjct: 62 IKCAKCQVGFS---SSDLVMR--ARDSVYHIECFRCSVCSRQLL--PGDEFSLREHELLC 114
Query: 523 RACH 526
RA H
Sbjct: 115 RADH 118
>UNIPROTKB|F1P4R3 [details] [associations]
symbol:FHL2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0009725 "response to hormone stimulus"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0055014 "atrial cardiac muscle cell development" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0015629 GO:GO:0008270 GO:GO:0005925 GO:GO:0000122
Gene3D:2.10.110.10 GO:GO:0009725 GeneTree:ENSGT00690000101670
OMA:QECKKTI EMBL:AADN02017859 IPI:IPI00590739
Ensembl:ENSGALT00000027119 Uniprot:F1P4R3
Length = 283
Score = 153 (58.9 bits), Expect = 2.6e-08, P = 2.6e-08
Identities = 52/202 (25%), Positives = 81/202 (40%)
Query: 319 CHTCGEKVTGA-------GQAC-QAMGNLYHTNCFICCS-CGRALRGKAFYNVHGRVYCE 369
CH C E + G C + NLY C C G + ++ + H C
Sbjct: 11 CHYCKESLFGKKYILREDSPYCVKCYENLYSNTCEECKKPIGADCKDLSYKDRHWHETCF 70
Query: 370 EDYLYSGFQQTAEKCAICGHLIM-EMYSGFQQTAEKCAICGHLIMEMI--LQAMGKSYHP 426
+ A HL+ + YS + + KC C IM ++ G S+H
Sbjct: 71 HCFQCKNSLVDKPFAAKEEHLLCTDCYSN--EYSSKCNECKKTIMPGTRKMEYKGNSWHE 128
Query: 427 GCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVS 486
CF C C + + G + DN+ +CV Y + FA +C C K IT T V
Sbjct: 129 TCFICYRCQQPI-GTKSFIPKDNQNFCVPCYEKQFAMQCVQCKKAIT-------TGGVTY 180
Query: 487 MDKDFHVDCYMCEDCGLQLTDE 508
++ +H +C++C C QL+ +
Sbjct: 181 REQPWHKECFVCTGCKKQLSGQ 202
Score = 142 (55.0 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 32/107 (29%), Positives = 50/107 (46%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
+Q A +C C I + + +H CF C C + L G FT D YC++ +
Sbjct: 160 KQFAMQCVQCKKAITTGGVTYREQPWHKECFVCTGCKKQLSGQRFT-SRDEFAYCLSCFC 218
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQL 505
++A KCA C P+ G T + ++ +H DC+ C+ C L L
Sbjct: 219 NLYAKKCAGC---TNPISGLGGTKYISFEERQWHNDCFNCKKCSLSL 262
Score = 76 (31.8 bits), Expect = 6.5e-11, Sum P(2) = 6.5e-11
Identities = 29/99 (29%), Positives = 38/99 (38%)
Query: 315 YFGICHTCGEKVTGAGQACQAMG---NLYHTNCFICCSCGRALRGKAFYNVHGRVYCEED 371
Y C C +K GA C+ + +H CF C C +L K F + C +
Sbjct: 40 YSNTCEEC-KKPIGAD--CKDLSYKDRHWHETCFHCFQCKNSLVDKPFAAKEEHLLCTDC 96
Query: 372 YL--YSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAIC 408
Y YS +K + G ME Y G E C IC
Sbjct: 97 YSNEYSSKCNECKKTIMPGTRKME-YKG-NSWHETCFIC 133
>RGD|61950 [details] [associations]
symbol:Csrp2 "cysteine and glycine-rich protein 2" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IDA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045445 "myoblast
differentiation" evidence=IEP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:61950
GO:GO:0007275 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0045445 HOVERGEN:HBG051143 eggNOG:NOG281414
KO:K09377 HOGENOM:HOG000111233 CTD:1466 EMBL:U44948 IPI:IPI00231137
RefSeq:NP_803174.2 UniGene:Rn.94754 ProteinModelPortal:Q62908
SMR:Q62908 IntAct:Q62908 STRING:Q62908 PRIDE:Q62908 GeneID:29317
KEGG:rno:29317 UCSC:RGD:61950 InParanoid:Q62908 NextBio:608764
ArrayExpress:Q62908 Genevestigator:Q62908
GermOnline:ENSRNOG00000003772 Uniprot:Q62908
Length = 193
Score = 130 (50.8 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
AEKC+ CG + E I+ A GK +H CFRC C + L+ T + + +IYC Y +
Sbjct: 116 AEKCSRCGDSVYAAEKIIGA-GKPWHKNCFRCAKCGKSLESTTLT-EKEGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGYGQG 185
Score = 114 (45.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC CG + +Q G+++H CF C +C + LD + D +IYC + Y + +
Sbjct: 9 KCGACGRTVYHAEEVQCDGRTFHRCCFLCMVCRKNLDSTTVAIH-DEEIYCKSCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 82 (33.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGR 519
A KC+ CG + E +++ K +H +C+ C CG L+ T +K +G
Sbjct: 116 AEKCSRCGDSVYAAE------KIIGAGKPWHKNCFRCAKCGKSLESTTLTEK-----EGE 164
Query: 520 LMCRACH 526
+ C+ C+
Sbjct: 165 IYCKGCY 171
Score = 74 (31.1 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C CG V A + Q G +H CF+C C + L +H +YC+ Y
Sbjct: 10 CGACGRTVYHAEEV-QCDGRTFHRCCFLCMVCRKNLDSTTVA-IHDEEIYCKSCY 62
>UNIPROTKB|Q62908 [details] [associations]
symbol:Csrp2 "Cysteine and glycine-rich protein 2"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 RGD:61950 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0045445
HOVERGEN:HBG051143 eggNOG:NOG281414 KO:K09377 HOGENOM:HOG000111233
CTD:1466 EMBL:U44948 IPI:IPI00231137 RefSeq:NP_803174.2
UniGene:Rn.94754 ProteinModelPortal:Q62908 SMR:Q62908 IntAct:Q62908
STRING:Q62908 PRIDE:Q62908 GeneID:29317 KEGG:rno:29317
UCSC:RGD:61950 InParanoid:Q62908 NextBio:608764 ArrayExpress:Q62908
Genevestigator:Q62908 GermOnline:ENSRNOG00000003772 Uniprot:Q62908
Length = 193
Score = 130 (50.8 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
AEKC+ CG + E I+ A GK +H CFRC C + L+ T + + +IYC Y +
Sbjct: 116 AEKCSRCGDSVYAAEKIIGA-GKPWHKNCFRCAKCGKSLESTTLT-EKEGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGYGQG 185
Score = 114 (45.2 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC CG + +Q G+++H CF C +C + LD + D +IYC + Y + +
Sbjct: 9 KCGACGRTVYHAEEVQCDGRTFHRCCFLCMVCRKNLDSTTVAIH-DEEIYCKSCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 82 (33.9 bits), Expect = 2.9e-09, Sum P(2) = 2.9e-09
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGR 519
A KC+ CG + E +++ K +H +C+ C CG L+ T +K +G
Sbjct: 116 AEKCSRCGDSVYAAE------KIIGAGKPWHKNCFRCAKCGKSLESTTLTEK-----EGE 164
Query: 520 LMCRACH 526
+ C+ C+
Sbjct: 165 IYCKGCY 171
Score = 74 (31.1 bits), Expect = 7.0e-11, Sum P(2) = 7.0e-11
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C CG V A + Q G +H CF+C C + L +H +YC+ Y
Sbjct: 10 CGACGRTVYHAEEV-QCDGRTFHRCCFLCMVCRKNLDSTTVA-IHDEEIYCKSCY 62
>RGD|62053 [details] [associations]
symbol:Csrp1 "cysteine and glycine-rich protein 1" species:10116
"Rattus norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0007399
"nervous system development" evidence=NAS] [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:62053
GO:GO:0005634 GO:GO:0007399 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00550000074548 HOVERGEN:HBG051143
CTD:1465 eggNOG:NOG281414 KO:K09377 OMA:NKCGCCQ HOGENOM:HOG000111233
OrthoDB:EOG4BRWMS EMBL:U09567 EMBL:BC062407 IPI:IPI00231690
PIR:S53580 RefSeq:NP_058844.1 UniGene:Rn.108075
ProteinModelPortal:P47875 SMR:P47875 PhosphoSite:P47875 PRIDE:P47875
Ensembl:ENSRNOT00000011991 GeneID:29276 KEGG:rno:29276
UCSC:RGD:62053 InParanoid:P47875 NextBio:608639
Genevestigator:P47875 GermOnline:ENSRNOG00000008937 Uniprot:P47875
Length = 193
Score = 123 (48.4 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+E+C C + E ++ A GKS+H CFRC C + L+ D D +IYC Y +
Sbjct: 116 SERCPRCSQAVYAAEKVIGA-GKSWHKSCFRCAKCGKGLESTTLA-DKDGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGFGQG 185
Score = 110 (43.8 bits), Expect = 0.00067, P = 0.00066
Identities = 36/126 (28%), Positives = 54/126 (42%)
Query: 403 EKCAICGHLI-MEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
+KC +C + +Q G S+H CF C +C + LD V + +IYC + Y + +
Sbjct: 8 KKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGE-EIYCKSCYGKKY 66
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPD--KRCYPLQGR 519
PK G+G GT +SMDK + E G + T P+ K + G
Sbjct: 67 GPKGYGYGQGA----GT------LSMDKGESLGIKHEEAPGHRPTTNPNASKFAQKIGGS 116
Query: 520 LMCRAC 525
C C
Sbjct: 117 ERCPRC 122
Score = 85 (35.0 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C C +K + Q GN +H +CF+C C + L VHG +YC+ Y
Sbjct: 10 CGVC-QKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVA-VHGEEIYCKSCY 62
Score = 73 (30.8 bits), Expect = 0.00011, Sum P(2) = 0.00011
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
+C C + + E +V+ K +H C+ C CG L+ T DK G +
Sbjct: 118 RCPRCSQAVYAAE------KVIGAGKSWHKSCFRCAKCGKGLESTTLADK-----DGEIY 166
Query: 522 CRACH 526
C+ C+
Sbjct: 167 CKGCY 171
>MGI|MGI:88549 [details] [associations]
symbol:Csrp1 "cysteine and glycine-rich protein 1"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0015629 "actin cytoskeleton"
evidence=TAS] [GO:0030036 "actin cytoskeleton organization"
evidence=TAS] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 MGI:MGI:88549 GO:GO:0005634 GO:GO:0046872
GO:GO:0030036 GO:GO:0015629 GO:GO:0008270 Gene3D:2.10.110.10
HOVERGEN:HBG051143 CTD:1465 eggNOG:NOG281414 KO:K09377 OMA:NKCGCCQ
HOGENOM:HOG000111233 OrthoDB:EOG4BRWMS EMBL:D88793 EMBL:AF092921
EMBL:AK077787 EMBL:AK087436 EMBL:BC006912 IPI:IPI00123891
RefSeq:NP_031817.1 UniGene:Mm.196484 ProteinModelPortal:P97315
SMR:P97315 IntAct:P97315 STRING:P97315 PhosphoSite:P97315
PaxDb:P97315 PRIDE:P97315 Ensembl:ENSMUST00000027677
Ensembl:ENSMUST00000097561 GeneID:13007 KEGG:mmu:13007
InParanoid:P97315 ChiTaRS:CSRP1 NextBio:282836 Bgee:P97315
CleanEx:MM_CSRP1 Genevestigator:P97315
GermOnline:ENSMUSG00000026421 Uniprot:P97315
Length = 193
Score = 123 (48.4 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+E+C C + E ++ A GKS+H CFRC C + L+ D D +IYC Y +
Sbjct: 116 SERCPRCSQAVYAAEKVIGA-GKSWHKSCFRCAKCGKGLESTTLA-DKDGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGFGQG 185
Score = 109 (43.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 403 EKCAICGHLI-MEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
+KC +C + +Q G S+H CF C +C + LD V + +IYC + Y + +
Sbjct: 8 KKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGE-EIYCKSCYGKKY 66
Query: 462 APKCAACGKG 471
PK G+G
Sbjct: 67 GPKGYGYGQG 76
Score = 85 (35.0 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C C +K + Q GN +H +CF+C C + L VHG +YC+ Y
Sbjct: 10 CGVC-QKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVA-VHGEEIYCKSCY 62
Score = 73 (30.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
+C C + + E +V+ K +H C+ C CG L+ T DK G +
Sbjct: 118 RCPRCSQAVYAAE------KVIGAGKSWHKSCFRCAKCGKGLESTTLADK-----DGEIY 166
Query: 522 CRACH 526
C+ C+
Sbjct: 167 CKGCY 171
>UNIPROTKB|P21291 [details] [associations]
symbol:CSRP1 "Cysteine and glycine-rich protein 1"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
HOVERGEN:HBG051143 CTD:1465 eggNOG:NOG281414 KO:K09377 OMA:NKCGCCQ
HOGENOM:HOG000111233 OrthoDB:EOG4BRWMS EMBL:M33146 EMBL:M76378
EMBL:M76376 EMBL:M76377 EMBL:BC032493 IPI:IPI00442073 PIR:S12658
RefSeq:NP_001180499.1 RefSeq:NP_001180500.1 RefSeq:NP_001180501.1
RefSeq:NP_004069.1 UniGene:Hs.108080 ProteinModelPortal:P21291
SMR:P21291 IntAct:P21291 STRING:P21291 PhosphoSite:P21291
DMDM:118161 OGP:P21291 PaxDb:P21291 PeptideAtlas:P21291
PRIDE:P21291 DNASU:1465 Ensembl:ENST00000340006
Ensembl:ENST00000367306 Ensembl:ENST00000532460
Ensembl:ENST00000533432 GeneID:1465 KEGG:hsa:1465 UCSC:uc001gws.3
GeneCards:GC01M201452 HGNC:HGNC:2469 MIM:123876 neXtProt:NX_P21291
PharmGKB:PA26967 InParanoid:P21291 PhylomeDB:P21291 GenomeRNAi:1465
NextBio:6017 ArrayExpress:P21291 Bgee:P21291 CleanEx:HS_CSRP1
Genevestigator:P21291 GermOnline:ENSG00000159176 Uniprot:P21291
Length = 193
Score = 123 (48.4 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+E+C C + E ++ A GKS+H CFRC C + L+ D D +IYC Y +
Sbjct: 116 SERCPRCSQAVYAAEKVIGA-GKSWHKACFRCAKCGKGLESTTLA-DKDGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGFGQG 185
Score = 109 (43.4 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 403 EKCAICGHLI-MEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
+KC +C + +Q G S+H CF C +C + LD V + +IYC + Y + +
Sbjct: 8 KKCGVCQKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVAVHGE-EIYCKSCYGKKY 66
Query: 462 APKCAACGKG 471
PK G+G
Sbjct: 67 GPKGYGYGQG 76
Score = 85 (35.0 bits), Expect = 7.4e-11, Sum P(2) = 7.4e-11
Identities = 18/55 (32%), Positives = 26/55 (47%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C C +K + Q GN +H +CF+C C + L VHG +YC+ Y
Sbjct: 10 CGVC-QKTVYFAEEVQCEGNSFHKSCFLCMVCKKNLDSTTVA-VHGEEIYCKSCY 62
Score = 71 (30.1 bits), Expect = 1.9e-07, Sum P(2) = 1.9e-07
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
+C C + + E +V+ K +H C+ C CG L+ T DK G +
Sbjct: 118 RCPRCSQAVYAAE------KVIGAGKSWHKACFRCAKCGKGLESTTLADK-----DGEIY 166
Query: 522 CRACH 526
C+ C+
Sbjct: 167 CKGCY 171
>UNIPROTKB|A6QQY6 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 CTD:64211 OMA:SHQGQEM
EMBL:DAAA02045421 EMBL:BC150043 IPI:IPI00867450
RefSeq:NP_001095531.1 UniGene:Bt.88188 Ensembl:ENSBTAT00000004042
GeneID:520759 KEGG:bta:520759 InParanoid:A6QQY6 NextBio:20873176
Uniprot:A6QQY6
Length = 402
Score = 179 (68.1 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSRE--GKLYCKNDFFRRFGT 62
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 63 KCAGCAQGISP----SDLVRK-ARSKVFHLNCFTCMVCNKQLST--GEELYVIDENKFVC 115
Query: 523 RACHLSHLS 531
+ +LS S
Sbjct: 116 KDDYLSSSS 124
>UNIPROTKB|E2RRP3 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177 KO:K09372
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AAEX03014690
RefSeq:XP_543409.3 ProteinModelPortal:E2RRP3
Ensembl:ENSCAFT00000014514 GeneID:486283 KEGG:cfa:486283
NextBio:20860085 Uniprot:E2RRP3
Length = 402
Score = 179 (68.1 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSRE--GKLYCKNDFFRRFGT 62
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 63 KCAGCAQGISP----SDLVRK-ARSKVFHLNCFTCMVCNKQLST--GEELYVIDENKFVC 115
Query: 523 RACHLSHLS 531
+ +LS S
Sbjct: 116 KDDYLSSSS 124
>UNIPROTKB|Q9H2C1 [details] [associations]
symbol:LHX5 "LIM/homeobox protein Lhx5" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846
GO:GO:0021879 GO:GO:0021527 GO:GO:0021702 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 CTD:64211 OMA:SHQGQEM EMBL:AF291181 EMBL:BC109230
IPI:IPI00022760 RefSeq:NP_071758.1 UniGene:Hs.302029
ProteinModelPortal:Q9H2C1 SMR:Q9H2C1 STRING:Q9H2C1
PhosphoSite:Q9H2C1 DMDM:18202938 PRIDE:Q9H2C1
Ensembl:ENST00000261731 GeneID:64211 KEGG:hsa:64211 UCSC:uc001tvj.1
GeneCards:GC12M113900 HGNC:HGNC:14216 MIM:605992 neXtProt:NX_Q9H2C1
PharmGKB:PA30367 InParanoid:Q9H2C1 PhylomeDB:Q9H2C1
GenomeRNAi:64211 NextBio:66119 Bgee:Q9H2C1 CleanEx:HS_LHX5
Genevestigator:Q9H2C1 GermOnline:ENSG00000089116 Uniprot:Q9H2C1
Length = 402
Score = 179 (68.1 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSRE--GKLYCKNDFFRRFGT 62
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 63 KCAGCAQGISP----SDLVRK-ARSKVFHLNCFTCMVCNKQLST--GEELYVIDENKFVC 115
Query: 523 RACHLSHLS 531
+ +LS S
Sbjct: 116 KDDYLSSSS 124
>MGI|MGI:107792 [details] [associations]
symbol:Lhx5 "LIM homeobox protein 5" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007267 "cell-cell signaling" evidence=IGI] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IGI] [GO:0021549 "cerebellum
development" evidence=IGI] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IGI] [GO:0021766 "hippocampus
development" evidence=IMP] [GO:0021846 "cell proliferation in
forebrain" evidence=IMP] [GO:0021879 "forebrain neuron
differentiation" evidence=IMP] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IGI]
[GO:0042127 "regulation of cell proliferation" evidence=IMP]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IGI] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:107792 GO:GO:0005634 GO:GO:0021766
GO:GO:0045893 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879 GO:GO:0021527
GO:GO:0021702 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:U61155 EMBL:BC057585 IPI:IPI00118119
RefSeq:NP_032525.1 UniGene:Mm.5151 ProteinModelPortal:P61375
SMR:P61375 STRING:P61375 PhosphoSite:P61375 PRIDE:P61375
Ensembl:ENSMUST00000031591 GeneID:16873 KEGG:mmu:16873
InParanoid:P61375 NextBio:290846 Bgee:P61375 CleanEx:MM_LHX5
Genevestigator:P61375 GermOnline:ENSMUSG00000029595 Uniprot:P61375
Length = 402
Score = 179 (68.1 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSRE--GKLYCKNDFFRRFGT 62
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 63 KCAGCAQGISP----SDLVRK-ARSKVFHLNCFTCMVCNKQLST--GEELYVIDENKFVC 115
Query: 523 RACHLSHLS 531
+ +LS S
Sbjct: 116 KDDYLSSSS 124
>RGD|71079 [details] [associations]
symbol:Lhx5 "LIM homeobox 5" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA] [GO:0007267
"cell-cell signaling" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA;ISO] [GO:0021549 "cerebellum
development" evidence=ISO] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA;ISO] [GO:0021766 "hippocampus
development" evidence=IEA;ISO] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA;ISO] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA;ISO] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=IEA;ISO]
[GO:0042127 "regulation of cell proliferation" evidence=ISO]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:71079 GO:GO:0005634 GO:GO:0021766 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0021846 GO:GO:0021879 GO:GO:0021527 GO:GO:0021702
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
CTD:64211 OMA:SHQGQEM EMBL:L35572 IPI:IPI00198471 PIR:I61573
RefSeq:NP_620605.1 UniGene:Rn.54653 ProteinModelPortal:P61376
SMR:P61376 STRING:P61376 Ensembl:ENSRNOT00000001883 GeneID:124451
KEGG:rno:124451 UCSC:RGD:71079 InParanoid:P61376 NextBio:620463
Genevestigator:P61376 GermOnline:ENSRNOG00000001392 Uniprot:P61376
Length = 402
Score = 179 (68.1 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKTNLSEKCFSRE--GKLYCKNDFFRRFGT 62
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 63 KCAGCAQGISP----SDLVRK-ARSKVFHLNCFTCMVCNKQLST--GEELYVIDENKFVC 115
Query: 523 RACHLSHLS 531
+ +LS S
Sbjct: 116 KDDYLSSSS 124
>UNIPROTKB|Q32LE9 [details] [associations]
symbol:CSRP2 "Cysteine and glycine-rich protein 2"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0007275
GO:GO:0005634 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00550000074548 HOVERGEN:HBG051143
eggNOG:NOG281414 KO:K09377 HOGENOM:HOG000111233 OrthoDB:EOG4BRWMS
EMBL:BC109617 IPI:IPI00717036 RefSeq:NP_001033272.1
UniGene:Bt.46264 ProteinModelPortal:Q32LE9 SMR:Q32LE9 PRIDE:Q32LE9
Ensembl:ENSBTAT00000017835 GeneID:539381 KEGG:bta:539381 CTD:1466
InParanoid:Q32LE9 OMA:TQTEKDG NextBio:20877955 Uniprot:Q32LE9
Length = 193
Score = 130 (50.8 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
AEKC+ CG + E I+ A GK +H CFRC C + L+ T + + +IYC Y +
Sbjct: 116 AEKCSRCGDSVYAAEKIIGA-GKPWHKNCFRCAKCGKSLESTTLT-EKEGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGYGQG 185
Score = 117 (46.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC CG + +Q G+S+H CF C +C + LD + D +IYC + Y + +
Sbjct: 9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIH-DEEIYCKSCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 82 (33.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGR 519
A KC+ CG + E +++ K +H +C+ C CG L+ T +K +G
Sbjct: 116 AEKCSRCGDSVYAAE------KIIGAGKPWHKNCFRCAKCGKSLESTTLTEK-----EGE 164
Query: 520 LMCRACH 526
+ C+ C+
Sbjct: 165 IYCKGCY 171
Score = 73 (30.8 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C CG V A + Q G +H CF+C C + L +H +YC+ Y
Sbjct: 10 CGACGRTVYHAEEV-QCDGRSFHRCCFLCMVCRKNLDSTTVA-IHDEEIYCKSCY 62
>UNIPROTKB|Q16527 [details] [associations]
symbol:CSRP2 "Cysteine and glycine-rich protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=NAS]
[GO:0005634 "nucleus" evidence=NAS] [GO:0003674
"molecular_function" evidence=ND] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0007275
GO:GO:0005634 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0045445 HOVERGEN:HBG051143
eggNOG:NOG281414 KO:K09377 HOGENOM:HOG000111233 OrthoDB:EOG4BRWMS
CTD:1466 EMBL:U46006 EMBL:U57646 EMBL:U95018 EMBL:BT019913
EMBL:BC000992 IPI:IPI00002824 RefSeq:NP_001312.1 UniGene:Hs.530904
ProteinModelPortal:Q16527 SMR:Q16527 IntAct:Q16527 STRING:Q16527
PhosphoSite:Q16527 DMDM:2497674 PaxDb:Q16527 PRIDE:Q16527
DNASU:1466 Ensembl:ENST00000311083 Ensembl:ENST00000546966
GeneID:1466 KEGG:hsa:1466 UCSC:uc001syl.1 GeneCards:GC12M077185
HGNC:HGNC:2470 HPA:HPA045617 MIM:601871 neXtProt:NX_Q16527
PharmGKB:PA26968 InParanoid:Q16527 PhylomeDB:Q16527 GenomeRNAi:1466
NextBio:6021 ArrayExpress:Q16527 Bgee:Q16527 CleanEx:HS_CSRP2
Genevestigator:Q16527 GermOnline:ENSG00000175183 Uniprot:Q16527
Length = 193
Score = 130 (50.8 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
AEKC+ CG + E I+ A GK +H CFRC C + L+ T + + +IYC Y +
Sbjct: 116 AEKCSRCGDSVYAAEKIIGA-GKPWHKNCFRCAKCGKSLESTTLT-EKEGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGYGQG 185
Score = 117 (46.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC CG + +Q G+S+H CF C +C + LD + D +IYC + Y + +
Sbjct: 9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIH-DEEIYCKSCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 82 (33.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGR 519
A KC+ CG + E +++ K +H +C+ C CG L+ T +K +G
Sbjct: 116 AEKCSRCGDSVYAAE------KIIGAGKPWHKNCFRCAKCGKSLESTTLTEK-----EGE 164
Query: 520 LMCRACH 526
+ C+ C+
Sbjct: 165 IYCKGCY 171
Score = 73 (30.8 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C CG V A + Q G +H CF+C C + L +H +YC+ Y
Sbjct: 10 CGACGRTVYHAEEV-QCDGRSFHRCCFLCMVCRKNLDSTTVA-IHDEEIYCKSCY 62
>MGI|MGI:1202907 [details] [associations]
symbol:Csrp2 "cysteine and glycine-rich protein 2"
species:10090 "Mus musculus" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 MGI:MGI:1202907 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0045445
GeneTree:ENSGT00550000074548 HOVERGEN:HBG051143 eggNOG:NOG281414
KO:K09377 HOGENOM:HOG000111233 OrthoDB:EOG4BRWMS CTD:1466
OMA:TQTEKDG EMBL:D88792 EMBL:AK010626 EMBL:AK012647 EMBL:BC012663
IPI:IPI00470178 RefSeq:NP_031818.3 UniGene:Mm.2020
ProteinModelPortal:P97314 SMR:P97314 STRING:P97314
PhosphoSite:P97314 PaxDb:P97314 PRIDE:P97314
Ensembl:ENSMUST00000020403 GeneID:13008 KEGG:mmu:13008
UCSC:uc007gzs.2 InParanoid:P97314 NextBio:282840 Bgee:P97314
CleanEx:MM_CSRP2 Genevestigator:P97314
GermOnline:ENSMUSG00000020186 Uniprot:P97314
Length = 193
Score = 130 (50.8 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
AEKC+ CG + E I+ A GK +H CFRC C + L+ T + + +IYC Y +
Sbjct: 116 AEKCSRCGDSVYAAEKIIGA-GKPWHKNCFRCAKCGKSLESTTLT-EKEGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGYGQG 185
Score = 117 (46.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC CG + +Q G+S+H CF C +C + LD + D +IYC + Y + +
Sbjct: 9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIH-DEEIYCKSCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 82 (33.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGR 519
A KC+ CG + E +++ K +H +C+ C CG L+ T +K +G
Sbjct: 116 AEKCSRCGDSVYAAE------KIIGAGKPWHKNCFRCAKCGKSLESTTLTEK-----EGE 164
Query: 520 LMCRACH 526
+ C+ C+
Sbjct: 165 IYCKGCY 171
Score = 73 (30.8 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C CG V A + Q G +H CF+C C + L +H +YC+ Y
Sbjct: 10 CGACGRTVYHAEEV-QCDGRSFHRCCFLCMVCRKNLDSTTVA-IHDEEIYCKSCY 62
>UNIPROTKB|G3V9V9 [details] [associations]
symbol:Csrp2 "Cysteine and glycine-rich protein 2, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:61950
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00550000074548 KO:K09377 CTD:1466 RefSeq:NP_803174.2
UniGene:Rn.94754 GeneID:29317 KEGG:rno:29317 NextBio:608764
EMBL:CH473960 ProteinModelPortal:G3V9V9 SMR:G3V9V9
Ensembl:ENSRNOT00000067011 Uniprot:G3V9V9
Length = 193
Score = 130 (50.8 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 28/72 (38%), Positives = 39/72 (54%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
AEKC+ CG + E I+ A GK +H CFRC C + L+ T + + +IYC Y +
Sbjct: 116 AEKCSRCGDSVYAAEKIIGA-GKPWHKNCFRCAKCGKSLESTTLT-EKEGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGYGQG 185
Score = 117 (46.2 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC CG + +Q G+S+H CF C +C + LD + D +IYC + Y + +
Sbjct: 9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIH-DEEIYCKSCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 82 (33.9 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 18/67 (26%), Positives = 32/67 (47%)
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGR 519
A KC+ CG + E +++ K +H +C+ C CG L+ T +K +G
Sbjct: 116 AEKCSRCGDSVYAAE------KIIGAGKPWHKNCFRCAKCGKSLESTTLTEK-----EGE 164
Query: 520 LMCRACH 526
+ C+ C+
Sbjct: 165 IYCKGCY 171
Score = 73 (30.8 bits), Expect = 8.9e-11, Sum P(2) = 8.9e-11
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C CG V A + Q G +H CF+C C + L +H +YC+ Y
Sbjct: 10 CGACGRTVYHAEEV-QCDGRSFHRCCFLCMVCRKNLDSTTVA-IHDEEIYCKSCY 62
>UNIPROTKB|P50460 [details] [associations]
symbol:CSRP2 "Cysteine and glycine-rich protein 2"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0007275
GO:GO:0005634 GO:GO:0030154 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00550000074548 HOVERGEN:HBG051143
eggNOG:NOG281414 KO:K09377 HOGENOM:HOG000111233 OrthoDB:EOG4BRWMS
CTD:1466 OMA:TQTEKDG EMBL:X84264 IPI:IPI00600440 PIR:S52335
RefSeq:NP_990539.1 UniGene:Gga.665 ProteinModelPortal:P50460
SMR:P50460 Ensembl:ENSGALT00000016683 GeneID:396128 KEGG:gga:396128
InParanoid:P50460 NextBio:20816185 Uniprot:P50460
Length = 194
Score = 129 (50.5 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 27/72 (37%), Positives = 39/72 (54%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
AEKC+ CG + E ++ A GK +H CFRC C + L+ T + + +IYC Y +
Sbjct: 117 AEKCSRCGDSVYAAEKVIGA-GKPWHKNCFRCAKCGKSLESTTLT-EKEGEIYCKGCYAK 174
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 175 NFGPKGFGYGQG 186
Score = 114 (45.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC CG + +Q G+S+H CF C +C + LD + D ++YC + Y + +
Sbjct: 9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIH-DAEVYCKSCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 83 (34.3 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 19/67 (28%), Positives = 32/67 (47%)
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGR 519
A KC+ CG + E +V+ K +H +C+ C CG L+ T +K +G
Sbjct: 117 AEKCSRCGDSVYAAE------KVIGAGKPWHKNCFRCAKCGKSLESTTLTEK-----EGE 165
Query: 520 LMCRACH 526
+ C+ C+
Sbjct: 166 IYCKGCY 172
Score = 75 (31.5 bits), Expect = 9.9e-11, Sum P(2) = 9.9e-11
Identities = 17/54 (31%), Positives = 22/54 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY 372
C CG V A + Q G +H CF+C C + L VYC+ Y
Sbjct: 10 CGACGRTVYHAEEV-QCDGRSFHRCCFLCMVCRKNLDSTTVAIHDAEVYCKSCY 62
>UNIPROTKB|I3LNC5 [details] [associations]
symbol:LPXN "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050859 "negative regulation of B cell receptor
signaling pathway" evidence=IEA] [GO:0033628 "regulation of cell
adhesion mediated by integrin" evidence=IEA] [GO:0007162 "negative
regulation of cell adhesion" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003712 "transcription cofactor activity"
evidence=IEA] [GO:0002102 "podosome" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007162 GO:GO:0002102 GO:GO:0003712 GO:GO:0033628 OMA:GFHEKDK
GO:GO:0050859 EMBL:CU929527 Ensembl:ENSSSCT00000031344
Uniprot:I3LNC5
Length = 316
Score = 175 (66.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 53/185 (28%), Positives = 83/185 (44%)
Query: 347 CCSCGRALRGKAFYNV----HGR----VYCEEDYLYSGF-QQTAEKCAICGHLIMEMYSG 397
C SC + + GK + + H +C+E+ S F ++T A C ++S
Sbjct: 82 CASCQKPIAGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTG--LAYCSKDYHHLFS- 138
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDY 457
+CA C I++ +L AM +++HP F C C E F + D K YC D+
Sbjct: 139 -----PRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFH-EKDKKPYCRKDF 192
Query: 458 HRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQ 517
MF+PKC C + PV E + +MD +H +C++C DC + + L
Sbjct: 193 LAMFSPKCGGCNR---PV--LENYLS--AMDTVWHPECFVCGDC---FSSFSTGSFFELD 242
Query: 518 GRLMC 522
GR C
Sbjct: 243 GRPFC 247
Score = 143 (55.4 bits), Expect = 5.2e-07, P = 5.2e-07
Identities = 55/223 (24%), Positives = 92/223 (41%)
Query: 318 ICHTCGEKV--------TGAGQACQAMGNLYHTNCFICCS--CGRALRG--KAFYNVHGR 365
+C C E++ TG + +L+ C C + + L + ++ H
Sbjct: 107 VCAHCKEEIGSSPFFERTGLAYCSKDYHHLFSPRCAYCAAPILDKVLTAMDQTWHPEHFF 166
Query: 366 -VYCEEDYLYSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSY 424
+C E + GF + +K C + M+S KC C ++E L AM +
Sbjct: 167 CAHCGEVFGAEGFHEKDKK-PYCRKDFLAMFS------PKCGGCNRPVLENYLSAMDTVW 219
Query: 425 HPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
HP CF C C F ++D + +C YH+ C CG+ P+ G R
Sbjct: 220 HPECFVCGDCFSSFSTGSF-FELDGRPFCELHYHQRRGTLCHGCGQ---PITG-----RC 270
Query: 485 VS-MDKDFHVDCYMCEDCGLQLT-----DEPDKR-CYPLQGRL 520
+S M FH + ++C+ C +QL+ ++ DK C P +L
Sbjct: 271 ISAMGYKFHPEHFVCDFCLMQLSKGIFREQNDKTYCQPCFNKL 313
Score = 117 (46.2 bits), Expect = 0.00043, P = 0.00043
Identities = 40/159 (25%), Positives = 68/159 (42%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
G C +C + + AG+ A+G +H F+C C + F+ G YC +DY +
Sbjct: 80 GHCASCQKPI--AGKMIHALGQAWHPEHFVCAHCKEEIGSSPFFERTGLAYCSKDYHHL- 136
Query: 377 FQQTAEKCAICGHLIME-MYSGFQQTAEK----CAICGHLI-MEMILQAMGKSYHPGCFR 430
F + +CA C I++ + + QT CA CG + E + K Y F
Sbjct: 137 F---SPRCAYCAAPILDKVLTAMDQTWHPEHFFCAHCGEVFGAEGFHEKDKKPYCRKDFL 193
Query: 431 CCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACG 469
+C G V ++N + ++ ++ P+C CG
Sbjct: 194 AMFSPKC-GGCNRPV-LENYLSAMDT---VWHPECFVCG 227
>UNIPROTKB|Q7PTE3 [details] [associations]
symbol:AGAP006901 "AGAP006901-PA" species:7165 "Anopheles
gambiae" [GO:0001952 "regulation of cell-matrix adhesion"
evidence=ISS] [GO:0015629 "actin cytoskeleton" evidence=ISS]
[GO:0051371 "muscle alpha-actinin binding" evidence=ISS]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
Gene3D:2.10.110.10 SUPFAM:SSF50156 EMBL:AAAB01008807 GO:GO:0001952
InterPro:IPR006643 SMART:SM00735 GO:GO:0051371 HOGENOM:HOG000046926
RefSeq:XP_308855.4 ProteinModelPortal:Q7PTE3
EnsemblMetazoa:AGAP006901-RA GeneID:1270178
KEGG:aga:AgaP_AGAP006901 VectorBase:AGAP006901 OMA:YESHENI
PhylomeDB:Q7PTE3 ArrayExpress:Q7PTE3 Uniprot:Q7PTE3
Length = 2116
Score = 189 (71.6 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 49/183 (26%), Positives = 81/183 (44%)
Query: 346 ICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAIC-----GHLIMEMYSGFQQ 400
+C C + +RG F GR++C + ++ I G L E Y +
Sbjct: 1941 LCGCCQQQIRGP-FITALGRIWCPDHFICHNANCKRPLADIGFVEEKGDLYCE-YCFEEF 1998
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
A C+ C + L A+GK +HP CF+C C + PF ++ + YC D++ +
Sbjct: 1999 LAPLCSKCNGRVKGDCLNAIGKQFHPECFKCTYCGKQFGNSPFFLE-EGDPYCEKDWNDL 2057
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
F KC ACG PVE ++ V +++ ++H C+ C C L + + GR
Sbjct: 2058 FTTKCFACG---FPVEAGDKWVE--ALNNNYHSQCFNCTSCKKNLEGQS---FFAKGGRP 2109
Query: 521 MCR 523
C+
Sbjct: 2110 FCK 2112
Score = 53 (23.7 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 17/53 (32%), Positives = 22/53 (41%)
Query: 152 SNDINAFQFDRKAQPQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQVP 204
SN NA + A P P PP PP ++E +PGP+VP
Sbjct: 465 SNGSNASELSGNAYPVCPAS-------PPLPPPPPPLTMEECTLQ-EPGPEVP 509
Score = 49 (22.3 bits), Expect = 1.2e-10, Sum P(2) = 1.2e-10
Identities = 16/48 (33%), Positives = 25/48 (52%)
Query: 7 KAKYLDAKCKPVGAIESFLVEGTSRAPAP----PPVDYKQYERGNIIA 50
K + L+A + V A+E L + PAP PP+D + RG ++A
Sbjct: 1015 KMRQLEALRRQVDALERRLGQQPEPEPAPLPVGPPLDVPR--RGEVMA 1060
Score = 47 (21.6 bits), Expect = 2.0e-10, Sum P(2) = 2.0e-10
Identities = 11/27 (40%), Positives = 14/27 (51%)
Query: 176 RDYPPYEAPPVYENIQELNKPPKPGPQ 202
RD PP E V E Q + +PP+ Q
Sbjct: 859 RDPPPEEEEEVEEEEQVVQQPPEQQQQ 885
Score = 38 (18.4 bits), Expect = 1.7e-09, Sum P(2) = 1.7e-09
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 26 VEGTSRAPAPPPVDY 40
VE + PAPPP +
Sbjct: 1744 VEPPTPKPAPPPTTF 1758
Score = 37 (18.1 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 316 FGICHTCGEKVTGAGQACQAMGNLYHTNC 344
FG+ T T A A +Y T C
Sbjct: 787 FGMTTTTTATTTTANSASSEEYRMYQTQC 815
>UNIPROTKB|Q179D0 [details] [associations]
symbol:AAEL005667 "AAEL005667-PA" species:7159 "Aedes
aegypti" [GO:0001952 "regulation of cell-matrix adhesion"
evidence=ISS] [GO:0015629 "actin cytoskeleton" evidence=ISS]
[GO:0051371 "muscle alpha-actinin binding" evidence=ISS]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
Gene3D:2.10.110.10 SUPFAM:SSF50156 GO:GO:0001952 eggNOG:NOG286537
InterPro:IPR006643 SMART:SM00735 GO:GO:0051371 OrthoDB:EOG4VDNDB
EMBL:CH477354 RefSeq:XP_001651243.1 UniGene:Aae.18579
ProteinModelPortal:Q179D0 EnsemblMetazoa:AAEL005667-RA
GeneID:5566824 KEGG:aag:AaeL_AAEL005667 VectorBase:AAEL005667
OMA:MPECPPP Uniprot:Q179D0
Length = 1172
Score = 190 (71.9 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 49/183 (26%), Positives = 84/183 (45%)
Query: 346 ICCSCGRALRGKAFYNVHGRVYCEEDYL-YSGF--QQTAEKCAI--CGHLIMEMYSGFQQ 400
IC C + F GR++C + ++ ++G + A+ + G L E Y +
Sbjct: 996 ICNKCNHKIVTGPFITALGRIWCPDHFICHNGNCKRPLADIGFVEEKGDLYCE-YCFEEF 1054
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
A C+ C + L A+GK +HP CF+C C + PF ++ + YC D++ +
Sbjct: 1055 LAPVCSKCNTRVKGDCLNAIGKQFHPECFKCAYCGKLFGNSPFFLE-EGDPYCEADWNEL 1113
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
F KC ACG PVE ++ V +++ ++H C+ C C L + + GR
Sbjct: 1114 FTTKCFACG---FPVEAGDKWVE--ALNNNYHSQCFNCTSCKKNLEGQS---FFAKGGRP 1165
Query: 521 MCR 523
C+
Sbjct: 1166 FCK 1168
Score = 42 (19.8 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 18/61 (29%), Positives = 23/61 (37%)
Query: 180 PYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVKTA 239
P + PP +EL + P V H IA T V R TV+ + PV
Sbjct: 723 PTQNPPHTPEPEELRQNV-PLAFVDTHSKSHLAKPIAQTVNTVNIRDQTVSYRETPVTIQ 781
Query: 240 T 240
T
Sbjct: 782 T 782
Score = 39 (18.8 bits), Expect = 2.6e-10, Sum P(2) = 2.6e-10
Identities = 12/37 (32%), Positives = 15/37 (40%)
Query: 180 PYEAPPVYENIQELNKPPKPGPQVPV--FGGEHRQMA 214
P P + E E KP K P P G +H +A
Sbjct: 661 PEPEPVIEEKKPEPEKPKKKLPPYPRKDAGSDHYSLA 697
Score = 37 (18.1 bits), Expect = 4.1e-10, Sum P(2) = 4.1e-10
Identities = 7/23 (30%), Positives = 11/23 (47%)
Query: 180 PYEAPPVYENIQELNKPPKPGPQ 202
P P+ I+E + P P P+
Sbjct: 636 PVPFKPIIPEIREPEEQPAPEPE 658
>UNIPROTKB|F1NWZ2 [details] [associations]
symbol:CSRP3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0002026
"regulation of the force of heart contraction" evidence=IEA]
[GO:0003300 "cardiac muscle hypertrophy" evidence=IEA] [GO:0006874
"cellular calcium ion homeostasis" evidence=IEA] [GO:0008307
"structural constituent of muscle" evidence=IEA] [GO:0030018 "Z
disc" evidence=IEA] [GO:0031433 "telethonin binding" evidence=IEA]
[GO:0033365 "protein localization to organelle" evidence=IEA]
[GO:0035995 "detection of muscle stretch" evidence=IEA] [GO:0042805
"actinin binding" evidence=IEA] [GO:0055003 "cardiac myofibril
assembly" evidence=IEA] [GO:0060048 "cardiac muscle contraction"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0030018 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0006874 GO:GO:0002026
GeneTree:ENSGT00550000074548 OMA:KYGPKGI EMBL:AADN02040066
IPI:IPI00598138 Ensembl:ENSGALT00000006436 Uniprot:F1NWZ2
Length = 193
Score = 128 (50.1 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 30/79 (37%), Positives = 41/79 (51%)
Query: 403 EKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
+KC CG + E I+ GK +H CFRC +C + L+ T D D ++YC Y +
Sbjct: 118 DKCPRCGKSVYAAEKIMGG-GKPWHKTCFRCAICGKSLESTNVT-DKDGELYCKVCYAKN 175
Query: 461 FAPKCAACGKGITPVEGTE 479
F PK G G+T VE E
Sbjct: 176 FGPKGIGFG-GLTQVEKKE 193
Score = 104 (41.7 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 22/70 (31%), Positives = 33/70 (47%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCL-CNECLDGVPFTVDVDNKIYCVNDYHRMF 461
KC C + +Q G+S+H CF C + C + LD +++IYC Y R +
Sbjct: 7 KCGACEKTVYHAEEIQCNGRSFHKTCFLCTVACRKALDSTTVAAH-ESEIYCKTCYGRKY 65
Query: 462 APKCAACGKG 471
PK G+G
Sbjct: 66 GPKGVGFGQG 75
Score = 82 (33.9 bits), Expect = 6.3e-08, Sum P(2) = 6.3e-08
Identities = 20/65 (30%), Positives = 30/65 (46%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
KC CGK + E +++ K +H C+ C CG L+ T+ DK G L
Sbjct: 119 KCPRCGKSVYAAE------KIMGGGKPWHKTCFRCAICGKSLESTNVTDK-----DGELY 167
Query: 522 CRACH 526
C+ C+
Sbjct: 168 CKVCY 172
Score = 75 (31.5 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICC-SCGRALRGKAFYNVHGRVYCEEDY 372
C C EK + Q G +H CF+C +C +AL +YC+ Y
Sbjct: 8 CGAC-EKTVYHAEEIQCNGRSFHKTCFLCTVACRKALDSTTVAAHESEIYCKTCY 61
>DICTYBASE|DDB_G0274109 [details] [associations]
symbol:paxB "paxillin" species:44689 "Dictyostelium
discoideum" [GO:0043326 "chemotaxis to folate" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0031589 "cell-substrate
adhesion" evidence=IMP] [GO:0031154 "culmination involved in
sorocarp development" evidence=IMP] [GO:0016477 "cell migration"
evidence=IMP] [GO:0016339 "calcium-dependent cell-cell adhesion"
evidence=IMP] [GO:0006897 "endocytosis" evidence=IMP] [GO:0048870
"cell motility" evidence=IMP] [GO:0007109 "cytokinesis, completion
of separation" evidence=IMP] [GO:0000910 "cytokinesis"
evidence=IGI] [GO:0032433 "filopodium tip" evidence=IDA]
[GO:0005925 "focal adhesion" evidence=IEA;IDA] [GO:0030175
"filopodium" evidence=IEA;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0042995 "cell projection" evidence=IEA] [GO:0030054 "cell
junction" evidence=IEA] [GO:0007155 "cell adhesion" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
dictyBase:DDB_G0274109 GO:GO:0005938 GO:GO:0016477 GO:GO:0005856
GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 GenomeReviews:CM000151_GR
GO:GO:0005925 EMBL:AAFI02000012 EMBL:AC123513 GO:GO:0032433
GO:GO:0043326 Gene3D:2.10.110.10 GO:GO:0007109 GO:GO:0016339
GO:GO:0031154 GO:GO:0031589 HSSP:O60711 eggNOG:NOG267887
EMBL:AJ002382 RefSeq:XP_644036.1 ProteinModelPortal:Q8MML5
PRIDE:Q8MML5 EnsemblProtists:DDB0185208 GeneID:8619466
KEGG:ddi:DDB_G0274109 KO:K05760 OMA:GECINAL ProtClustDB:CLSZ2731594
Uniprot:Q8MML5
Length = 569
Score = 125 (49.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 28/104 (26%), Positives = 51/104 (49%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
+CA C I + + A+GK +H F C C + +G F + D + YC D++ FA
Sbjct: 394 RCAHCDEPISDRCITALGKKWHVHHFVCTQCLKPFEGGNF-FERDGRPYCEADFYSTFAV 452
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTD 507
+C C +P+ G E + ++ +H + ++C+ C T+
Sbjct: 453 RCGGCN---SPIRG--ECIN--ALGTQWHPEHFVCQYCQKSFTN 489
Score = 123 (48.4 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 37/135 (27%), Positives = 56/135 (41%)
Query: 393 EMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIY 452
+ YS F A +C C I + A+G +HP F C C + F + K Y
Sbjct: 445 DFYSTF---AVRCGGCNSPIRGECINALGTQWHPEHFVCQYCQKSFTNGQF-FEFGGKPY 500
Query: 453 CVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKR 512
C YH+ C+ CGK ++ G V ++DK +H + ++C C L
Sbjct: 501 CDVHYHQQAGSVCSGCGKAVS---GR----CVDALDKKWHPEHFVCAFCMNPLAGGS--- 550
Query: 513 CYPLQ-GRLMCRACH 526
Y G+ C+ CH
Sbjct: 551 -YTANNGKPYCKGCH 564
Score = 105 (42.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C E ++ + A+G +H + F+C C + G F+ GR YCE D+ YS F
Sbjct: 395 CAHCDEPISD--RCITALGKKWHVHHFVCTQCLKPFEGGNFFERDGRPYCEADF-YSTF- 450
Query: 379 QTAEKCAIC 387
A +C C
Sbjct: 451 --AVRCGGC 457
Score = 94 (38.1 bits), Expect = 1.1e-09, Sum P(2) = 1.1e-09
Identities = 24/73 (32%), Positives = 32/73 (43%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
G C C + + G + QAMG YH F C +C L K +Y +CE+ Y
Sbjct: 334 GTCGGCRKPIFG--ETIQAMGKFYHPEHFCCHNCQNPLGTKNYYEQESLPHCEKCY---- 387
Query: 377 FQQTAEKCAICGH 389
Q+ CA C H
Sbjct: 388 -QELF--CARCAH 397
>UNIPROTKB|Q2KI95 [details] [associations]
symbol:FHL2 "Four and a half LIM domains protein 2"
species:9913 "Bos taurus" [GO:0043066 "negative regulation of
apoptotic process" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0055015 "ventricular cardiac muscle cell development"
evidence=IEA] [GO:0055014 "atrial cardiac muscle cell development"
evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0015629 "actin cytoskeleton" evidence=IEA] [GO:0009725
"response to hormone stimulus" evidence=IEA] [GO:0005925 "focal
adhesion" evidence=IEA] [GO:0001649 "osteoblast differentiation"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0005737 GO:GO:0043066
GO:GO:0046872 GO:GO:0015629 GO:GO:0008270 GO:GO:0006351
GO:GO:0005925 GO:GO:0000122 Gene3D:2.10.110.10 GO:GO:0009725
GO:GO:0008134 GO:GO:0001649 GO:GO:0055015 GO:GO:0060347
eggNOG:NOG314122 HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 EMBL:BC112720 IPI:IPI00692676
RefSeq:NP_001039511.1 UniGene:Bt.17559 ProteinModelPortal:Q2KI95
SMR:Q2KI95 STRING:Q2KI95 Ensembl:ENSBTAT00000001440 GeneID:510008
KEGG:bta:510008 CTD:2274 InParanoid:Q2KI95 KO:K14380 OMA:QECKKTI
OrthoDB:EOG4XKV7B NextBio:20869239 ArrayExpress:Q2KI95
GO:GO:0055014 Uniprot:Q2KI95
Length = 279
Score = 139 (54.0 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 32/107 (29%), Positives = 49/107 (45%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
+Q A +C C I + + +H CF C C + L G FT D YC+ +
Sbjct: 156 RQYALQCVQCKKPITTGGVTYREQPWHRECFVCTACKKPLSGQRFT-SRDEFAYCLGCFC 214
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQL 505
++A KCA C P+ G T + ++ +H DC+ C+ C L L
Sbjct: 215 DLYAKKCAGCAN---PISGLGGTKYISFEERQWHNDCFNCKKCSLSL 258
Score = 128 (50.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 34/121 (28%), Positives = 57/121 (47%)
Query: 390 LIMEMYSGFQQTAEKCAICGHLIMEMI--LQAMGKSYHPGCFRCCLCNECLDGVPFTVDV 447
L + YS Q+ + +C C IM ++ G S+H CF C C + + G +
Sbjct: 88 LCTDCYS--QEYSSRCQECKKSIMPGTRKMEYKGSSWHETCFICHRCQQPI-GTKSFIPK 144
Query: 448 DNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTD 507
D++ +CV Y R +A +C C K IT T V ++ +H +C++C C L+
Sbjct: 145 DSENFCVPCYERQYALQCVQCKKPIT-------TGGVTYREQPWHRECFVCTACKKPLSG 197
Query: 508 E 508
+
Sbjct: 198 Q 198
Score = 76 (31.8 bits), Expect = 1.4e-10, Sum P(2) = 1.4e-10
Identities = 18/73 (24%), Positives = 30/73 (41%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLY 374
Y C C + + + + G+ +H CFIC C + + K+F +C Y
Sbjct: 97 YSSRCQECKKSIMPGTRKMEYKGSSWHETCFICHRCQQPIGTKSFIPKDSENFCVPCYE- 155
Query: 375 SGFQQTAEKCAIC 387
+Q A +C C
Sbjct: 156 ---RQYALQCVQC 165
>UNIPROTKB|Q5ISK2 [details] [associations]
symbol:Q5ISK2 "LIM homeobox protein 1" species:9541 "Macaca
fascicularis" [GO:0001071 "nucleic acid binding transcription
factor activity" evidence=ISS] [GO:0001655 "urogenital system
development" evidence=ISS] [GO:0001657 "ureteric bud development"
evidence=ISS] [GO:0001702 "gastrulation with mouth forming second"
evidence=ISS] [GO:0001705 "ectoderm formation" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0001822 "kidney development"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0007389
"pattern specification process" evidence=ISS] [GO:0008045 "motor
neuron axon guidance" evidence=ISS] [GO:0009653 "anatomical
structure morphogenesis" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0009880 "embryonic pattern
specification" evidence=ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=ISS] [GO:0009952 "anterior/posterior
pattern specification" evidence=ISS] [GO:0009953 "dorsal/ventral
pattern formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY650378 ProteinModelPortal:Q5ISK2
Uniprot:Q5ISK2
Length = 403
Score = 177 (67.4 bits), Expect = 1.4e-10, P = 1.4e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 1 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 58
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 59 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 111
Query: 523 RACHLSHLS 531
+ +LS+ S
Sbjct: 112 KEDYLSNSS 120
>UNIPROTKB|A7Z015 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008045 "motor neuron axon guidance" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0060429 "epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0090009
"primitive streak formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0021527 "spinal cord association
neuron differentiation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISS] [GO:0010842 "retina layer
formation" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0021937 "cerebellar
Purkinje cell-granule cell precursor cell signaling involved in
regulation of granule cell precursor cell proliferation"
evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0010468
"regulation of gene expression" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISS]
[GO:0009791 "post-embryonic development" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0007389
"pattern specification process" evidence=ISS] [GO:0007267
"cell-cell signaling" evidence=ISS] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060067 "cervix development" evidence=ISS]
[GO:0001822 "kidney development" evidence=ISS] [GO:0001705
"ectoderm formation" evidence=ISS] [GO:0001702 "gastrulation with
mouth forming second" evidence=ISS] [GO:0001655 "urogenital system
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060065 "uterus
development" evidence=ISS] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=ISS] [GO:0072284 "metanephric S-shaped body
morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal vesicle
morphogenesis" evidence=IEA] [GO:0048793 "pronephros development"
evidence=IEA] [GO:0035852 "horizontal cell localization"
evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0021537 "telencephalon development" evidence=IEA]
[GO:0021517 "ventral spinal cord development" evidence=IEA]
[GO:0001823 "mesonephros development" evidence=IEA] [GO:0001658
"branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001658 GO:GO:0001657
GO:GO:0021527 GO:GO:0021702 GO:GO:0060068 GO:GO:0021537
GO:GO:0001823 GO:GO:0090009 GO:GO:0060059 GO:GO:0048793
GO:GO:2000768 GO:GO:0048703 GO:GO:0060322 GO:GO:0001071
GO:GO:0021517 GO:GO:0001706 GO:GO:0032525 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072283 GO:GO:0035849 GO:GO:0035846 GO:GO:0035847
EMBL:DAAA02048434 EMBL:BC153212 IPI:IPI00711186
RefSeq:NP_001098917.1 RefSeq:XP_003583582.1 UniGene:Bt.104440
Ensembl:ENSBTAT00000047689 GeneID:616699 GeneID:786041
KEGG:bta:616699 KEGG:bta:786041 InParanoid:A7Z015 NextBio:20927654
Uniprot:A7Z015
Length = 406
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSHLS 531
+ +LS+ S
Sbjct: 115 KEDYLSNSS 123
>UNIPROTKB|E2RMA8 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060429 "epithelium development"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0009880
"embryonic pattern specification" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:2000543
"positive regulation of gastrulation" evidence=ISS] [GO:0040019
"positive regulation of embryonic development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0001706 "endoderm formation" evidence=ISS] [GO:0090009
"primitive streak formation" evidence=ISS] [GO:0001764 "neuron
migration" evidence=ISS] [GO:0021527 "spinal cord association
neuron differentiation" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0048646 "anatomical structure formation involved
in morphogenesis" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell
precursor cell signaling involved in regulation of granule cell
precursor cell proliferation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021702 "cerebellar Purkinje
cell differentiation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009948 "anterior/posterior axis
specification" evidence=ISS] [GO:0009791 "post-embryonic
development" evidence=ISS] [GO:0009653 "anatomical structure
morphogenesis" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0007267 "cell-cell signaling"
evidence=ISS] [GO:0090190 "positive regulation of branching
involved in ureteric bud morphogenesis" evidence=ISS] [GO:0001071
"nucleic acid binding transcription factor activity" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060067 "cervix development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001702 "gastrulation with mouth forming second"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0072284 "metanephric S-shaped body morphogenesis" evidence=IEA]
[GO:0072283 "metanephric renal vesicle morphogenesis" evidence=IEA]
[GO:0048793 "pronephros development" evidence=IEA] [GO:0035852
"horizontal cell localization" evidence=IEA] [GO:0035849 "nephric
duct elongation" evidence=IEA] [GO:0032525 "somite rostral/caudal
axis specification" evidence=IEA] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021517 "ventral spinal cord
development" evidence=IEA] [GO:0001823 "mesonephros development"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GO:GO:0008045 GO:GO:0006366 GO:GO:0009791 GO:GO:0090190
GO:GO:0010842 GO:GO:0009953 GO:GO:0040019 GO:GO:0009880
GO:GO:0001658 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049
GO:GO:0072050 GeneTree:ENSGT00700000104177 KO:K09372 GO:GO:0021937
GO:GO:0021871 GO:GO:0072178 GO:GO:0061205 GO:GO:2000744
GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852 GO:GO:0072283
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 EMBL:AAEX03006612
RefSeq:XP_003639347.1 ProteinModelPortal:E2RMA8 SMR:E2RMA8
Ensembl:ENSCAFT00000028326 GeneID:100856649 KEGG:cfa:100856649
NextBio:20895890 Uniprot:E2RMA8
Length = 406
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSHLS 531
+ +LS+ S
Sbjct: 115 KEDYLSNSS 123
>UNIPROTKB|P48742 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0021517 "ventral spinal cord
development" evidence=IEA] [GO:0021537 "telencephalon development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0035502 "metanephric part of
ureteric bud development" evidence=IEA] [GO:0035849 "nephric duct
elongation" evidence=IEA] [GO:0035852 "horizontal cell
localization" evidence=IEA] [GO:0044344 "cellular response to
fibroblast growth factor stimulus" evidence=IEA] [GO:0048793
"pronephros development" evidence=IEA] [GO:0072177 "mesonephric
duct development" evidence=IEA] [GO:0072224 "metanephric glomerulus
development" evidence=IEA] [GO:0072278 "metanephric comma-shaped
body morphogenesis" evidence=IEA] [GO:0072283 "metanephric renal
vesicle morphogenesis" evidence=IEA] [GO:0072284 "metanephric
S-shaped body morphogenesis" evidence=IEA] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=ISS] [GO:0060065 "uterus
development" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0001655 "urogenital system development" evidence=ISS]
[GO:0001657 "ureteric bud development" evidence=ISS] [GO:0001705
"ectoderm formation" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0007267 "cell-cell signaling" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009953
"dorsal/ventral pattern formation" evidence=ISS] [GO:0010468
"regulation of gene expression" evidence=ISS] [GO:0021549
"cerebellum development" evidence=ISS] [GO:0021702 "cerebellar
Purkinje cell differentiation" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0072049 "comma-shaped body morphogenesis"
evidence=ISS] [GO:0072050 "S-shaped body morphogenesis"
evidence=ISS] [GO:0072077 "renal vesicle morphogenesis"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0048646 "anatomical structure formation involved in
morphogenesis" evidence=ISS] [GO:0060322 "head development"
evidence=ISS] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=ISS] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0060429 "epithelium development"
evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0040019 "positive regulation of embryonic
development" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISS] [GO:0007399
"nervous system development" evidence=TAS] [GO:0009887 "organ
morphogenesis" evidence=TAS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0044344 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001658 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0060068 GO:GO:0021537 GO:GO:0090009
GO:GO:0060059 GO:GO:0035502 GO:GO:0048793 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543 GO:GO:0072049
GO:GO:0072050 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG EMBL:U14755 EMBL:AC023315
EMBL:AC025882 EMBL:BC111936 EMBL:BC101674 IPI:IPI00550117
PIR:G01507 RefSeq:NP_005559.2 UniGene:Hs.443727
ProteinModelPortal:P48742 SMR:P48742 STRING:P48742
PhosphoSite:P48742 DMDM:60416412 PaxDb:P48742 PRIDE:P48742
DNASU:3975 Ensembl:ENST00000254457 GeneID:3975 KEGG:hsa:3975
UCSC:uc002hnh.2 GeneCards:GC17P035294 HGNC:HGNC:6593 HPA:CAB002770
MIM:601999 neXtProt:NX_P48742 PharmGKB:PA30364 InParanoid:P48742
PhylomeDB:P48742 GenomeRNAi:3975 NextBio:15580 ArrayExpress:P48742
Bgee:P48742 CleanEx:HS_LHX1 Genevestigator:P48742
GermOnline:ENSG00000132130 GO:GO:0060067 GO:GO:0035852
GO:GO:0072177 GO:GO:0072278 GO:GO:0072283 GO:GO:0072284
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 Uniprot:P48742
Length = 406
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSHLS 531
+ +LS+ S
Sbjct: 115 KEDYLSNSS 123
>UNIPROTKB|F2Z531 [details] [associations]
symbol:LHX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:2000768 "positive
regulation of nephron tubule epithelial cell differentiation"
evidence=IEA] [GO:2000744 "positive regulation of anterior head
development" evidence=IEA] [GO:2000543 "positive regulation of
gastrulation" evidence=IEA] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IEA]
[GO:0090009 "primitive streak formation" evidence=IEA] [GO:0072284
"metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0072283
"metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072049
"comma-shaped body morphogenesis" evidence=IEA] [GO:0061205
"paramesonephric duct development" evidence=IEA] [GO:0060322 "head
development" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060067 "cervix development" evidence=IEA]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=IEA] [GO:0048793 "pronephros development" evidence=IEA]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043234 "protein complex"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0035852 "horizontal cell
localization" evidence=IEA] [GO:0035849 "nephric duct elongation"
evidence=IEA] [GO:0035847 "uterine epithelium development"
evidence=IEA] [GO:0035846 "oviduct epithelium development"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0021871 "forebrain regionalization" evidence=IEA] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=IEA]
[GO:0021537 "telencephalon development" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021517 "ventral spinal cord development" evidence=IEA]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IEA]
[GO:0009791 "post-embryonic development" evidence=IEA] [GO:0008045
"motor neuron axon guidance" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001823 "mesonephros development" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001706 "endoderm formation"
evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0045892 GO:GO:0001764 GO:GO:0045893 GO:GO:0043234
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953
GO:GO:0040019 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0021517 GO:GO:0001706 GO:GO:0032525
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 KO:K09372 GO:GO:0021937 GO:GO:0021871
GO:GO:0061205 GO:GO:2000744 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072283 GO:GO:0035849 GO:GO:0035846 GO:GO:0035847
EMBL:CU929499 RefSeq:XP_003131754.1 UniGene:Ssc.22980
ProteinModelPortal:F2Z531 SMR:F2Z531 Ensembl:ENSSSCT00000019256
GeneID:100513681 KEGG:ssc:100513681 Uniprot:F2Z531
Length = 406
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSHLS 531
+ +LS+ S
Sbjct: 115 KEDYLSNSS 123
>UNIPROTKB|P63008 [details] [associations]
symbol:Lhx1 "LIM/homeobox protein Lhx1" species:10036
"Mesocricetus auratus" [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0010468 "regulation of gene expression" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527
"spinal cord association neuron differentiation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISS]
[GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072050
"S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:X81407 PIR:I48186
ProteinModelPortal:P63008 SMR:P63008 Uniprot:P63008
Length = 406
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSHLS 531
+ +LS+ S
Sbjct: 115 KEDYLSNSS 123
>UNIPROTKB|Q5IS44 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9598 "Pan
troglodytes" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0035846 "oviduct epithelium development" evidence=ISS]
[GO:0035847 "uterine epithelium development" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060065 "uterus development" evidence=ISS] [GO:0060066 "oviduct
development" evidence=ISS] [GO:0060067 "cervix development"
evidence=ISS] [GO:0060068 "vagina development" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372
OrthoDB:EOG405S1F GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY665284 RefSeq:NP_001029088.1
UniGene:Ptr.6553 ProteinModelPortal:Q5IS44 SMR:Q5IS44 GeneID:454600
KEGG:ptr:454600 InParanoid:Q5IS44 NextBio:20836212 Uniprot:Q5IS44
Length = 406
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSHLS 531
+ +LS+ S
Sbjct: 115 KEDYLSNSS 123
>UNIPROTKB|Q5IS89 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:39432
"Saimiri boliviensis boliviensis" [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0001706 "endoderm formation" evidence=ISS]
[GO:0001764 "neuron migration" evidence=ISS] [GO:0001822 "kidney
development" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0009653
"anatomical structure morphogenesis" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0009880 "embryonic
pattern specification" evidence=ISS] [GO:0009948
"anterior/posterior axis specification" evidence=ISS] [GO:0009952
"anterior/posterior pattern specification" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0010468 "regulation of gene expression" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0021527
"spinal cord association neuron differentiation" evidence=ISS]
[GO:0021549 "cerebellum development" evidence=ISS] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=ISS]
[GO:0021871 "forebrain regionalization" evidence=ISS] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:0035846 "oviduct epithelium
development" evidence=ISS] [GO:0035847 "uterine epithelium
development" evidence=ISS] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:0043234 "protein complex"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0048646 "anatomical
structure formation involved in morphogenesis" evidence=ISS]
[GO:0048703 "embryonic viscerocranium morphogenesis" evidence=ISS]
[GO:0060059 "embryonic retina morphogenesis in camera-type eye"
evidence=ISS] [GO:0060065 "uterus development" evidence=ISS]
[GO:0060066 "oviduct development" evidence=ISS] [GO:0060067 "cervix
development" evidence=ISS] [GO:0060068 "vagina development"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072050
"S-shaped body morphogenesis" evidence=ISS] [GO:0072077 "renal
vesicle morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
HOVERGEN:HBG006263 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 GO:GO:0060067
GO:GO:0035846 GO:GO:0035847 EMBL:AY665239 RefSeq:XP_003929119.1
ProteinModelPortal:Q5IS89 SMR:Q5IS89 GeneID:101033157
Uniprot:Q5IS89
Length = 406
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSHLS 531
+ +LS+ S
Sbjct: 115 KEDYLSNSS 123
>MGI|MGI:99783 [details] [associations]
symbol:Lhx1 "LIM homeobox protein 1" species:10090 "Mus
musculus" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=IGI;IMP] [GO:0001655 "urogenital system
development" evidence=IMP] [GO:0001657 "ureteric bud development"
evidence=IMP] [GO:0001702 "gastrulation with mouth forming second"
evidence=IMP] [GO:0001705 "ectoderm formation" evidence=IGI]
[GO:0001706 "endoderm formation" evidence=IMP] [GO:0001764 "neuron
migration" evidence=IMP] [GO:0001822 "kidney development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0007267 "cell-cell
signaling" evidence=IGI] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0007389 "pattern specification
process" evidence=IGI;IMP] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=IMP]
[GO:0009791 "post-embryonic development" evidence=IMP] [GO:0009880
"embryonic pattern specification" evidence=IGI] [GO:0009948
"anterior/posterior axis specification" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI]
[GO:0009953 "dorsal/ventral pattern formation" evidence=IGI]
[GO:0010468 "regulation of gene expression" evidence=IMP]
[GO:0010842 "retina layer formation" evidence=IMP] [GO:0021527
"spinal cord association neuron differentiation" evidence=IGI]
[GO:0021549 "cerebellum development" evidence=IGI] [GO:0021702
"cerebellar Purkinje cell differentiation" evidence=IGI]
[GO:0021871 "forebrain regionalization" evidence=IGI] [GO:0021937
"cerebellar Purkinje cell-granule cell precursor cell signaling
involved in regulation of granule cell precursor cell
proliferation" evidence=IGI] [GO:0030154 "cell differentiation"
evidence=IEA] [GO:0032525 "somite rostral/caudal axis
specification" evidence=IMP] [GO:0035846 "oviduct epithelium
development" evidence=IMP] [GO:0035847 "uterine epithelium
development" evidence=IMP] [GO:0035849 "nephric duct elongation"
evidence=IMP] [GO:0035852 "horizontal cell localization"
evidence=IMP] [GO:0040019 "positive regulation of embryonic
development" evidence=IMP] [GO:0043234 "protein complex"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IGI;IMP] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=IGI;IMP] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=IMP] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=IMP]
[GO:0060065 "uterus development" evidence=IMP] [GO:0060066 "oviduct
development" evidence=IMP] [GO:0060067 "cervix development"
evidence=IMP] [GO:0060068 "vagina development" evidence=IMP]
[GO:0060322 "head development" evidence=IGI] [GO:0060429
"epithelium development" evidence=IMP] [GO:0061205 "paramesonephric
duct development" evidence=IMP] [GO:0072001 "renal system
development" evidence=IGI] [GO:0072049 "comma-shaped body
morphogenesis" evidence=IMP] [GO:0072050 "S-shaped body
morphogenesis" evidence=IMP] [GO:0072077 "renal vesicle
morphogenesis" evidence=IMP] [GO:0072178 "nephric duct
morphogenesis" evidence=IMP] [GO:0090009 "primitive streak
formation" evidence=IMP] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=IMP]
[GO:2000543 "positive regulation of gastrulation" evidence=IMP]
[GO:2000744 "positive regulation of anterior head development"
evidence=IMP] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=IMP] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
MGI:MGI:99783 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0044344
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045
GO:GO:0006366 GO:GO:0009791 GO:GO:0090190 GO:GO:0009953
GO:GO:0040019 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0001823 GO:GO:0090009
GO:GO:0060059 GO:GO:0035502 GO:GO:0048793 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0021517
GO:GO:0001706 GO:GO:0032525 GO:GO:0001705 GO:GO:2000543
GO:GO:0072049 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0061205 GO:GO:2000744 OMA:PSEMNEG
GO:GO:0060067 GO:GO:0035852 GO:GO:0072177 GO:GO:0072278
GO:GO:0072283 GO:GO:0072284 GO:GO:0035849 GO:GO:0035846
GO:GO:0035847 EMBL:Z27410 EMBL:S68107 EMBL:AF039706 EMBL:AF039705
IPI:IPI00119516 PIR:I48637 RefSeq:NP_032524.1 UniGene:Mm.4965
ProteinModelPortal:P63006 SMR:P63006 STRING:P63006 PRIDE:P63006
Ensembl:ENSMUST00000018842 GeneID:16869 KEGG:mmu:16869
InParanoid:P63006 NextBio:290830 Bgee:P63006 CleanEx:MM_LHX1
Genevestigator:P63006 GermOnline:ENSMUSG00000018698 Uniprot:P63006
Length = 406
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSHLS 531
+ +LS+ S
Sbjct: 115 KEDYLSNSS 123
>RGD|71074 [details] [associations]
symbol:Lhx1 "LIM homeobox 1" species:10116 "Rattus norvegicus"
[GO:0001071 "nucleic acid binding transcription factor activity"
evidence=ISO;ISS] [GO:0001655 "urogenital system development"
evidence=ISO;ISS] [GO:0001657 "ureteric bud development"
evidence=ISO;ISS] [GO:0001658 "branching involved in ureteric bud
morphogenesis" evidence=IEA] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISO;ISS] [GO:0001705 "ectoderm formation"
evidence=ISO;ISS] [GO:0001706 "endoderm formation" evidence=ISO;ISS]
[GO:0001764 "neuron migration" evidence=ISO;ISS] [GO:0001822 "kidney
development" evidence=ISO;ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=ISO;ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0007267 "cell-cell signaling"
evidence=ISO;ISS] [GO:0007389 "pattern specification process"
evidence=ISO;ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISO;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0009653 "anatomical structure morphogenesis" evidence=ISO;ISS]
[GO:0009791 "post-embryonic development" evidence=ISO;ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISO;ISS]
[GO:0009948 "anterior/posterior axis specification"
evidence=ISO;ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISO;ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISO;ISS] [GO:0010468 "regulation of gene
expression" evidence=ISO;ISS] [GO:0010842 "retina layer formation"
evidence=ISO;ISS] [GO:0021517 "ventral spinal cord development"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISO;ISS] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=ISO;ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISO;ISS] [GO:0021871 "forebrain
regionalization" evidence=ISO;ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation of
granule cell precursor cell proliferation" evidence=ISO;ISS]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA;ISO] [GO:0035502 "metanephric part of ureteric bud
development" evidence=IEP] [GO:0035846 "oviduct epithelium
development" evidence=ISO;ISS] [GO:0035847 "uterine epithelium
development" evidence=ISO;ISS] [GO:0035849 "nephric duct elongation"
evidence=IEA;ISO] [GO:0035852 "horizontal cell localization"
evidence=IEA;ISO] [GO:0040019 "positive regulation of embryonic
development" evidence=ISO;ISS] [GO:0043234 "protein complex"
evidence=ISO;ISS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044344 "cellular response to fibroblast growth
factor stimulus" evidence=IEP] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent"
evidence=ISO;ISS] [GO:0048646 "anatomical structure formation
involved in morphogenesis" evidence=ISO;ISS] [GO:0048703 "embryonic
viscerocranium morphogenesis" evidence=ISO;ISS] [GO:0048793
"pronephros development" evidence=IEA] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=ISO;ISS] [GO:0060065
"uterus development" evidence=ISO;ISS] [GO:0060066 "oviduct
development" evidence=ISO;ISS] [GO:0060067 "cervix development"
evidence=ISO;ISS] [GO:0060068 "vagina development" evidence=ISO;ISS]
[GO:0060322 "head development" evidence=ISO;ISS] [GO:0060429
"epithelium development" evidence=ISO;ISS] [GO:0061205
"paramesonephric duct development" evidence=ISO;ISS] [GO:0072001
"renal system development" evidence=ISO] [GO:0072049 "comma-shaped
body morphogenesis" evidence=ISO;ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISO;ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISO;ISS] [GO:0072164 "mesonephric tubule
development" evidence=IEP] [GO:0072177 "mesonephric duct
development" evidence=IEP] [GO:0072178 "nephric duct morphogenesis"
evidence=ISO;ISS] [GO:0072224 "metanephric glomerulus development"
evidence=IEP] [GO:0072278 "metanephric comma-shaped body
morphogenesis" evidence=IEP] [GO:0072283 "metanephric renal vesicle
morphogenesis" evidence=IEA] [GO:0072284 "metanephric S-shaped body
morphogenesis" evidence=IEP] [GO:0090009 "primitive streak
formation" evidence=ISO;ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISO;ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISO;ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISO;ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISO;ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:71074 GO:GO:0005634 GO:GO:0045892 GO:GO:0001764 GO:GO:0045893
GO:GO:0043234 GO:GO:0044344 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001658 GO:GO:0021527 GO:GO:0021702
GO:GO:0060068 GO:GO:0021537 GO:GO:0090009 GO:GO:0060059
GO:GO:0035502 GO:GO:0048793 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0021517 GO:GO:0001706
GO:GO:0032525 GO:GO:0001705 GO:GO:2000543
GeneTree:ENSGT00700000104177 GO:GO:0072224 CTD:3975 eggNOG:NOG257130
HOGENOM:HOG000231630 HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F
GO:GO:0021937 GO:GO:0021871 GO:GO:0072178 GO:GO:0061205
GO:GO:2000744 GO:GO:0072077 OMA:PSEMNEG GO:GO:0060067 GO:GO:0035852
GO:GO:0072177 GO:GO:0072278 GO:GO:0072283 GO:GO:0072284
GO:GO:0035849 GO:GO:0035846 GO:GO:0035847 EMBL:S71523
IPI:IPI00199573 RefSeq:NP_665887.3 UniGene:Rn.127825
ProteinModelPortal:P63007 SMR:P63007 STRING:P63007
PhosphoSite:P63007 PRIDE:P63007 Ensembl:ENSRNOT00000003799
GeneID:257634 KEGG:rno:257634 InParanoid:P63007 NextBio:624166
Genevestigator:P63007 GermOnline:ENSRNOG00000002812 Uniprot:P63007
Length = 406
Score = 177 (67.4 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 41/129 (31%), Positives = 69/129 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSHLS 531
+ +LS+ S
Sbjct: 115 KEDYLSNSS 123
>UNIPROTKB|P67966 [details] [associations]
symbol:CSRP1 "Cysteine and glycine-rich protein 1"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005737
GO:GO:0005856 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00550000074548 HOVERGEN:HBG051143 CTD:1465
eggNOG:NOG281414 KO:K09377 EMBL:X73831 IPI:IPI00585009 PIR:A49648
PIR:B44358 PIR:C44358 RefSeq:NP_990579.1 UniGene:Gga.693 PDB:1B8T
PDB:1CTL PDBsum:1B8T PDBsum:1CTL ProteinModelPortal:P67966
SMR:P67966 Ensembl:ENSGALT00000000424 GeneID:396176 KEGG:gga:396176
HOGENOM:HOG000111233 InParanoid:P67966 OrthoDB:EOG4BRWMS
EvolutionaryTrace:P67966 NextBio:20816230 ArrayExpress:P67966
Uniprot:P67966
Length = 192
Score = 124 (48.7 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
++ C CG + E ++ A GKS+H CFRC C + L+ D D +IYC Y +
Sbjct: 115 SDGCPRCGQAVYAAEKVIGA-GKSWHKSCFRCAKCGKSLESTTLA-DKDGEIYCKGCYAK 172
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 173 NFGPKGFGFGQG 184
Score = 111 (44.1 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 403 EKCAICGHLI-MEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
+KC +C + +Q G S+H CF C +C + LD V D +IYC + Y + +
Sbjct: 8 KKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGD-EIYCKSCYGKKY 66
Query: 462 APKCAACGKG 471
PK G G
Sbjct: 67 GPKGYGYGMG 76
Score = 80 (33.2 bits), Expect = 1.5e-10, Sum P(2) = 1.5e-10
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHG-RVYCEEDY 372
C C +K + Q G+ +H +CF+C C + L VHG +YC+ Y
Sbjct: 10 CGVC-QKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVA-VHGDEIYCKSCY 62
Score = 77 (32.2 bits), Expect = 2.3e-08, Sum P(2) = 2.3e-08
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLMC 522
C CG+ + E +V+ K +H C+ C CG L+ T DK G + C
Sbjct: 118 CPRCGQAVYAAE------KVIGAGKSWHKSCFRCAKCGKSLESTTLADK-----DGEIYC 166
Query: 523 RACH 526
+ C+
Sbjct: 167 KGCY 170
Score = 39 (18.8 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMC 498
+CA CGK + E T DKD + C C
Sbjct: 144 RCAKCGKSL------ESTTLA---DKDGEIYCKGC 169
>UNIPROTKB|F1RYJ8 [details] [associations]
symbol:CSRP2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00550000074548 KO:K09377 CTD:1466 OMA:TQTEKDG
EMBL:CU466429 RefSeq:XP_003481816.1 UniGene:Ssc.11530
Ensembl:ENSSSCT00000001040 GeneID:100153630 KEGG:ssc:100153630
Uniprot:F1RYJ8
Length = 193
Score = 128 (50.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 28/72 (38%), Positives = 38/72 (52%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
AEKC CG + E I+ A GK +H CFRC C + L+ T + + +IYC Y +
Sbjct: 116 AEKCPRCGDSVYAAEKIIGA-GKPWHKNCFRCAKCGKSLESTTLT-EKEGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGYGQG 185
Score = 116 (45.9 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 22/69 (31%), Positives = 35/69 (50%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC CG + +Q G+S+H CF C +C + LD + D ++YC + Y + +
Sbjct: 9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIH-DEEVYCKSCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 80 (33.2 bits), Expect = 2.4e-09, Sum P(2) = 2.4e-09
Identities = 18/67 (26%), Positives = 31/67 (46%)
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGR 519
A KC CG + E +++ K +H +C+ C CG L+ T +K +G
Sbjct: 116 AEKCPRCGDSVYAAE------KIIGAGKPWHKNCFRCAKCGKSLESTTLTEK-----EGE 164
Query: 520 LMCRACH 526
+ C+ C+
Sbjct: 165 IYCKGCY 171
Score = 74 (31.1 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 18/55 (32%), Positives = 24/55 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C CG V A + Q G +H CF+C C + L +H VYC+ Y
Sbjct: 10 CGACGRTVYHAEEV-QCDGRSFHRCCFLCMVCRKNLDSTTVA-IHDEEVYCKSCY 62
>UNIPROTKB|F1NMV9 [details] [associations]
symbol:CSRP1 "Cysteine and glycine-rich protein 1"
species:9031 "Gallus gallus" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00550000074548 OMA:NKCGCCQ
EMBL:AADN02063963 EMBL:AADN02063964 IPI:IPI00819056
Ensembl:ENSGALT00000040769 ArrayExpress:F1NMV9 Uniprot:F1NMV9
Length = 194
Score = 124 (48.7 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
++ C CG + E ++ A GKS+H CFRC C + L+ D D +IYC Y +
Sbjct: 117 SDGCPRCGQAVYAAEKVIGA-GKSWHKSCFRCAKCGKSLESTTLA-DKDGEIYCKGCYAK 174
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 175 NFGPKGFGFGQG 186
Score = 111 (44.1 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 23/70 (32%), Positives = 34/70 (48%)
Query: 403 EKCAICGHLI-MEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
+KC +C + +Q G S+H CF C +C + LD V D +IYC + Y + +
Sbjct: 10 KKCGVCQKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGD-EIYCKSCYGKKY 68
Query: 462 APKCAACGKG 471
PK G G
Sbjct: 69 GPKGYGYGMG 78
Score = 80 (33.2 bits), Expect = 1.8e-10, Sum P(2) = 1.8e-10
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHG-RVYCEEDY 372
C C +K + Q G+ +H +CF+C C + L VHG +YC+ Y
Sbjct: 12 CGVC-QKAVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVA-VHGDEIYCKSCY 64
Score = 77 (32.2 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 18/64 (28%), Positives = 28/64 (43%)
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLMC 522
C CG+ + E +V+ K +H C+ C CG L+ T DK G + C
Sbjct: 120 CPRCGQAVYAAE------KVIGAGKSWHKSCFRCAKCGKSLESTTLADK-----DGEIYC 168
Query: 523 RACH 526
+ C+
Sbjct: 169 KGCY 172
Score = 39 (18.8 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 12/35 (34%), Positives = 15/35 (42%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMC 498
+CA CGK + E T DKD + C C
Sbjct: 146 RCAKCGKSL------ESTTLA---DKDGEIYCKGC 171
>FB|FBgn0085354 [details] [associations]
symbol:CG34325 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 EMBL:AE014298 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 EMBL:BT132655 RefSeq:NP_001097003.1
UniGene:Dm.19724 SMR:Q9VXC1 MINT:MINT-1003243
EnsemblMetazoa:FBtr0112527 GeneID:32656 KEGG:dme:Dmel_CG34325
UCSC:CG34325-RA FlyBase:FBgn0085354 eggNOG:NOG302338
InParanoid:Q9VXC1 OMA:PEHFACK OrthoDB:EOG4JDFPW ChiTaRS:CG34325
GenomeRNAi:32656 NextBio:779690 Uniprot:Q9VXC1
Length = 179
Score = 155 (59.6 bits), Expect = 2.1e-10, P = 2.1e-10
Identities = 41/142 (28%), Positives = 68/142 (47%)
Query: 386 ICGHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCC-LCNECLDGVPFT 444
+C + YSG C C I+E ++AMG+++H CF C C + L G F
Sbjct: 54 VCSACFVSNYSGI------CHGCKRPILERTIKAMGETWHEECFLCRGPCMQQLAGSSF- 106
Query: 445 VDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQ 504
+ D YC D+ MFA +C C P+ TE + V++D +H +C+ C+ C
Sbjct: 107 YEHDGLPYCRTDFEHMFAARCGNCK---API--TENAI--VALDAKWHRECFKCKKCKTP 159
Query: 505 LTDEPDKRCYPLQ-GRLMCRAC 525
+T + ++ + +C+AC
Sbjct: 160 ITASS----FVVEDNQPLCKAC 177
Score = 121 (47.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 28/96 (29%), Positives = 44/96 (45%)
Query: 315 YFGICHTCGEKVTGAGQACQAMGNLYHTNCFICCS-CGRALRGKAFYNVHGRVYCEEDYL 373
Y GICH C + + +AMG +H CF+C C + L G +FY G YC D+
Sbjct: 63 YSGICHGCKRPILE--RTIKAMGETWHEECFLCRGPCMQQLAGSSFYEHDGLPYCRTDFE 120
Query: 374 YSGFQQTAE-KCAICGHLIMEMYSGFQQTAEKCAIC 408
+ + K I + I+ + + + + KC C
Sbjct: 121 HMFAARCGNCKAPITENAIVALDAKWHRECFKCKKC 156
>UNIPROTKB|J9NYN2 [details] [associations]
symbol:CSRP1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00550000074548 CTD:1465 KO:K09377 OMA:NKCGCCQ
EMBL:AAEX03005010 EMBL:AAEX03005011 EMBL:AAEX03005012
RefSeq:XP_848609.2 ProteinModelPortal:J9NYN2
Ensembl:ENSCAFT00000049230 GeneID:607054 KEGG:cfa:607054
Uniprot:J9NYN2
Length = 193
Score = 123 (48.4 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+E+C C + E ++ A GKS+H CFRC C + L+ D D +IYC Y +
Sbjct: 116 SERCPRCSQAVYAAEKVIGA-GKSWHKSCFRCAKCGKGLESTTLA-DKDGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGFGQG 185
Score = 113 (44.8 bits), Expect = 0.00029, P = 0.00029
Identities = 36/126 (28%), Positives = 54/126 (42%)
Query: 403 EKCAICGHLI-MEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
+KC +C + +Q G S+H CF C +C + LD V + +IYC + Y + +
Sbjct: 8 KKCGVCQKTVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVAVHGE-EIYCKSCYGKKY 66
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPD--KRCYPLQGR 519
PK G+G GT +SMDK + E G + T P+ K + G
Sbjct: 67 GPKGYGYGQGA----GT------LSMDKGESLGIKHEETLGHRPTTNPNASKFAQKIGGS 116
Query: 520 LMCRAC 525
C C
Sbjct: 117 ERCPRC 122
Score = 80 (33.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C C +K + Q G+ +H +CF+C C + L VHG +YC+ Y
Sbjct: 10 CGVC-QKTVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVA-VHGEEIYCKSCY 62
Score = 73 (30.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
+C C + + E +V+ K +H C+ C CG L+ T DK G +
Sbjct: 118 RCPRCSQAVYAAE------KVIGAGKSWHKSCFRCAKCGKGLESTTLADK-----DGEIY 166
Query: 522 CRACH 526
C+ C+
Sbjct: 167 CKGCY 171
>UNIPROTKB|Q3MHY1 [details] [associations]
symbol:CSRP1 "Cysteine and glycine-rich protein 1"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00550000074548 HOVERGEN:HBG051143 EMBL:BC104539
IPI:IPI00718193 RefSeq:NP_001077240.1 UniGene:Bt.43234
ProteinModelPortal:Q3MHY1 SMR:Q3MHY1 PRIDE:Q3MHY1
Ensembl:ENSBTAT00000021369 GeneID:615329 KEGG:bta:615329 CTD:1465
eggNOG:NOG281414 KO:K09377 OMA:NKCGCCQ NextBio:20899565
Uniprot:Q3MHY1
Length = 193
Score = 123 (48.4 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+E+C C + E ++ A GKS+H CFRC C + L+ D D +IYC Y +
Sbjct: 116 SERCPRCSQAVYAAEKVIGA-GKSWHKSCFRCAKCGKGLESTTLA-DKDGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGFGQG 185
Score = 109 (43.4 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 22/70 (31%), Positives = 35/70 (50%)
Query: 403 EKCAICGHLI-MEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
+KC +C + +Q G S+H CF C +C + LD V + +IYC + Y + +
Sbjct: 8 KKCGVCQKTVYFAEEVQCEGSSFHKSCFLCLVCKKNLDSTTVAVHGE-EIYCKSCYGKKY 66
Query: 462 APKCAACGKG 471
PK G+G
Sbjct: 67 GPKGYGYGQG 76
Score = 80 (33.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C C +K + Q G+ +H +CF+C C + L VHG +YC+ Y
Sbjct: 10 CGVC-QKTVYFAEEVQCEGSSFHKSCFLCLVCKKNLDSTTVA-VHGEEIYCKSCY 62
Score = 73 (30.8 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
+C C + + E +V+ K +H C+ C CG L+ T DK G +
Sbjct: 118 RCPRCSQAVYAAE------KVIGAGKSWHKSCFRCAKCGKGLESTTLADK-----DGEIY 166
Query: 522 CRACH 526
C+ C+
Sbjct: 167 CKGCY 171
>UNIPROTKB|I3LL97 [details] [associations]
symbol:CSRP1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00550000074548 KO:K09377 OMA:NKCGCCQ EMBL:FP476145
RefSeq:XP_003357724.1 Ensembl:ENSSSCT00000026397 GeneID:100622890
KEGG:ssc:100622890 Uniprot:I3LL97
Length = 193
Score = 123 (48.4 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 26/72 (36%), Positives = 37/72 (51%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+E+C C + E ++ A GKS+H CFRC C + L+ D D +IYC Y +
Sbjct: 116 SERCPRCSQAVYAAEKVIGA-GKSWHKSCFRCAKCGKGLESTTLA-DKDGEIYCKGCYAK 173
Query: 460 MFAPKCAACGKG 471
F PK G+G
Sbjct: 174 NFGPKGFGFGQG 185
Score = 80 (33.2 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 17/55 (30%), Positives = 26/55 (47%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C C +K + Q G+ +H +CF+C C + L VHG +YC+ Y
Sbjct: 10 CGVC-QKTVYFAEEVQCEGSSFHKSCFLCMVCKKNLDSTTVA-VHGEEIYCKSCY 62
Score = 73 (30.8 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 17/65 (26%), Positives = 28/65 (43%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
+C C + + E +V+ K +H C+ C CG L+ T DK G +
Sbjct: 118 RCPRCSQAVYAAE------KVIGAGKSWHKSCFRCAKCGKGLESTTLADK-----DGEIY 166
Query: 522 CRACH 526
C+ C+
Sbjct: 167 CKGCY 171
>FB|FBgn0014863 [details] [associations]
symbol:Mlp84B "Muscle LIM protein at 84B" species:7227
"Drosophila melanogaster" [GO:0060537 "muscle tissue development"
evidence=IEP] [GO:0015629 "actin cytoskeleton" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISS;IDA;NAS] [GO:0005737 "cytoplasm"
evidence=NAS] [GO:0007519 "skeletal muscle tissue development"
evidence=NAS] [GO:0030154 "cell differentiation" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008307
"structural constituent of muscle" evidence=IGI;IMP] [GO:0045214
"sarcomere organization" evidence=IGI] [GO:0030018 "Z disc"
evidence=IDA] [GO:0090175 "regulation of establishment of planar
polarity" evidence=IMP] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 EMBL:AE014297
GO:GO:0005634 GO:GO:0030018 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0007517 GO:GO:0045214 GO:GO:0008307
GeneTree:ENSGT00550000074548 eggNOG:NOG281414 GO:GO:0060537
EMBL:X91245 EMBL:AF090832 EMBL:BT003202 RefSeq:NP_477122.1
RefSeq:NP_731134.1 UniGene:Dm.5906 ProteinModelPortal:Q24400
SMR:Q24400 DIP:DIP-17587N IntAct:Q24400 MINT:MINT-329381
STRING:Q24400 PaxDb:Q24400 PRIDE:Q24400 EnsemblMetazoa:FBtr0081616
EnsemblMetazoa:FBtr0081617 GeneID:40849 KEGG:dme:Dmel_CG1019
CTD:40849 FlyBase:FBgn0014863 InParanoid:Q24400 OMA:PRCGGYV
OrthoDB:EOG42FQZR PhylomeDB:Q24400 GenomeRNAi:40849 NextBio:820948
Bgee:Q24400 GermOnline:CG1019 Uniprot:Q24400
Length = 495
Score = 134 (52.2 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 45/166 (27%), Positives = 63/166 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGK-AFYNVHGRVYCEEDY--LYS 375
C CG V A Q + G ++H C+ C C R L A G ++C Y L+
Sbjct: 325 CPRCGGAVFAAEQQL-SKGKVWHKKCYNCADCHRPLDSVLACDGPDGDIHCRACYGKLFG 383
Query: 376 ----GFQQTAEKCAICGHLIMEMYSGFQ----QTAEKCAICGHLIMEMILQAMGKS--YH 425
G+ + G ++ G +T+ C CG + Q + K+ +H
Sbjct: 384 PKGFGYGHAPTLVSTSGESTIQFPDGRPLAGPKTSGGCPRCGFAVFAAE-QMISKTRIWH 442
Query: 426 PGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKG 471
CF C C + LD D IYC Y R F PK G G
Sbjct: 443 KRCFYCSDCRKSLDSTNLNDGPDGDIYCRACYGRNFGPKGVGYGLG 488
Score = 115 (45.5 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 26/71 (36%), Positives = 35/71 (49%)
Query: 403 EKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
E C CG + E +L A G+S+H CF+C C + LD + D IYC Y +
Sbjct: 118 EGCPRCGGYVYAAEQML-ARGRSWHKECFKCGTCKKGLDSILCCEAPDKNIYCKGCYAKK 176
Query: 461 FAPKCAACGKG 471
F PK G+G
Sbjct: 177 FGPKGYGYGQG 187
Score = 107 (42.7 bits), Expect = 4.9e-06, Sum P(2) = 4.9e-06
Identities = 26/85 (30%), Positives = 41/85 (48%)
Query: 403 EKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
E C CG ++ E L + G+ +H CF C C++ LD + + D +YC Y +
Sbjct: 220 EGCPRCGGVVYAAEQKL-SKGREWHKKCFNCKDCHKTLDSINASDGPDRDVYCRTCYGKK 278
Query: 461 FAPKCA--ACGKGITPVEG-TEETV 482
+ P ACG G +G TE+ +
Sbjct: 279 WGPHGYGFACGSGFLQTDGLTEDQI 303
Score = 107 (42.7 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 402 AEKCAICGHLIMEMILQ-AMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
A KC CG + + A G +H CF+C +CN+ LD T + + ++YC + R
Sbjct: 9 APKCPRCGKSVYAAEERLAGGYVFHKNCFKCGMCNKSLDSTNCT-EHERELYCKTCHGRK 67
Query: 461 FAPKCAACGKG 471
F PK G G
Sbjct: 68 FGPKGYGFGTG 78
Score = 98 (39.6 bits), Expect = 4.7e-05, Sum P(2) = 4.7e-05
Identities = 26/83 (31%), Positives = 37/83 (44%)
Query: 403 EKCAICGHLIMEMILQ-AMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
E C CG + Q + GK +H C+ C C+ LD V D I+C Y ++F
Sbjct: 323 EGCPRCGGAVFAAEQQLSKGKVWHKKCYNCADCHRPLDSVLACDGPDGDIHCRACYGKLF 382
Query: 462 APKCAACGKGITPVEGT-EETVR 483
PK G T V + E T++
Sbjct: 383 GPKGFGYGHAPTLVSTSGESTIQ 405
Score = 76 (31.8 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 16/51 (31%), Positives = 24/51 (47%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCE 369
C CG+ V A + A G ++H NCF C C ++L +YC+
Sbjct: 12 CPRCGKSVYAAEERL-AGGYVFHKNCFKCGMCNKSLDSTNCTEHERELYCK 61
Score = 72 (30.4 bits), Expect = 3.1e-10, Sum P(3) = 3.1e-10
Identities = 18/62 (29%), Positives = 28/62 (45%)
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRA 524
C CG + E +++S + +H C+ C DC L D + P G + CRA
Sbjct: 421 CPRCGFAVFAAE------QMISKTRIWHKRCFYCSDCRKSL-DSTNLNDGP-DGDIYCRA 472
Query: 525 CH 526
C+
Sbjct: 473 CY 474
Score = 70 (29.7 bits), Expect = 4.9e-10, Sum P(3) = 4.9e-10
Identities = 19/62 (30%), Positives = 26/62 (41%)
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRA 524
C CG + E + +S K +H CY C DC L + C G + CRA
Sbjct: 325 CPRCGGAVFAAE------QQLSKGKVWHKKCYNCADCHRPL--DSVLACDGPDGDIHCRA 376
Query: 525 CH 526
C+
Sbjct: 377 CY 378
>UNIPROTKB|F1RKD0 [details] [associations]
symbol:LHX5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=IEA] [GO:0021879 "forebrain neuron
differentiation" evidence=IEA] [GO:0021846 "cell proliferation in
forebrain" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021527 "spinal cord association
neuron differentiation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0021766 GO:GO:0045893 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0021846 GO:GO:0021879
GO:GO:0021527 GO:GO:0021702 GeneTree:ENSGT00700000104177
GO:GO:0021937 OMA:SHQGQEM EMBL:CU468670 Ensembl:ENSSSCT00000010817
Uniprot:F1RKD0
Length = 401
Score = 174 (66.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 41/129 (31%), Positives = 68/129 (52%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHIKCVQCCECTN-LSEKCFSRE--GKLYCKNDFFRRFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRK-ARSKVFHLNCFTCMVCNKQLST--GEELYVIDENKFVC 114
Query: 523 RACHLSHLS 531
+ +LS S
Sbjct: 115 KDDYLSSSS 123
>UNIPROTKB|F5GZL6 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
HGNC:HGNC:19195 IPI:IPI01010741 ProteinModelPortal:F5GZL6
SMR:F5GZL6 PRIDE:F5GZL6 Ensembl:ENST00000546334 ArrayExpress:F5GZL6
Bgee:F5GZL6 Uniprot:F5GZL6
Length = 531
Score = 176 (67.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 56/191 (29%), Positives = 86/191 (45%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G + +KC++
Sbjct: 92 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKECMCQKCSL--P 137
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
+ + + Q C CG I L A+ K +H GCF+C C + L+ + D
Sbjct: 138 VSVGSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAE--YISKD 195
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCYMCEDCGLQLTD 507
YC DYH F +C +C K IT G RV+ +K +H C +C CG Q+
Sbjct: 196 GLPYCEADYHAKFGIRCDSCEKYIT---G-----RVLEAGEKHYHPSCALCVRCG-QMFA 246
Query: 508 EPDKRCYPLQG 518
E ++ Y LQG
Sbjct: 247 EGEEM-Y-LQG 255
Score = 141 (54.7 bits), Expect = 2.4e-06, P = 2.4e-06
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C CG ++ GQA A+ +H CF C SCG+ L + + + G YCE DY ++ F
Sbjct: 153 CGGCGTEIKN-GQALVALDKHWHLGCFKCKSCGKLLNAE-YISKDGLPYCEADY-HAKFG 209
Query: 379 QTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLIME---MILQAMGKS-YHPGC 428
+ C I G ++ + + C CG + E M LQ G S +HP C
Sbjct: 210 IRCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQ--GSSIWHPAC 263
Score = 139 (54.0 bits), Expect = 3.9e-06, P = 3.9e-06
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
TA C CG++ +L+ K +H CF C C L F V I C DY R+
Sbjct: 20 TAILCNTCGNVCKGEVLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYI-CTLDYQRL 78
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR- 519
+ +C +C + I EG E V ++ K +H DC++C C L P R G+
Sbjct: 79 YGTRCFSCDQFI---EG--EVVS--ALGKTYHPDCFVCAVCRLPFP--PGDRV-TFNGKE 128
Query: 520 LMCRACHL 527
MC+ C L
Sbjct: 129 CMCQKCSL 136
Score = 121 (47.7 bits), Expect = 0.00037, P = 0.00037
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFTVDVDNKIYCVNDYHRM 460
+C C I ++ A+GK+YHP CF C +C D V F + C +
Sbjct: 82 RCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFN---GKECMCQKCSLPV 138
Query: 461 FAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLTDE 508
A +G+ G ++ +V++DK +H+ C+ C+ CG L E
Sbjct: 139 SVGSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAE 190
>FB|FBgn0050178 [details] [associations]
symbol:CG30178 species:7227 "Drosophila melanogaster"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
EMBL:AE013599 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
HSSP:Q05158 GeneTree:ENSGT00690000101670 RefSeq:NP_726395.1
UniGene:Dm.29107 ProteinModelPortal:Q8MLQ2 SMR:Q8MLQ2 PRIDE:Q8MLQ2
EnsemblMetazoa:FBtr0072159 GeneID:246501 KEGG:dme:Dmel_CG30178
UCSC:CG30178-RA FlyBase:FBgn0050178 InParanoid:Q8MLQ2 OMA:WHEKCFR
OrthoDB:EOG4ZS7K7 PhylomeDB:Q8MLQ2 GenomeRNAi:246501 NextBio:842709
ArrayExpress:Q8MLQ2 Bgee:Q8MLQ2 Uniprot:Q8MLQ2
Length = 187
Score = 153 (58.9 bits), Expect = 3.5e-10, P = 3.5e-10
Identities = 42/184 (22%), Positives = 82/184 (44%)
Query: 346 ICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEK---CAICGHLIM-EMYSGFQQT 401
ICC C + +A ++ G+ Y + + A+ ++ E Y +
Sbjct: 5 ICCRCNEKIWPRAVCSL-GKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECY--LDKH 61
Query: 402 AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
A +C+ C I+E + A + +H CFRC C++ L F +V+ ++C + +F
Sbjct: 62 AARCSACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASF-FEVNGYLFCKAHFRELF 120
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM 521
+ +CA C K P++ VV++ +H C+ C C +++ + + G+ +
Sbjct: 121 SSRCAGCEK---PIDRRA----VVALSTKWHAKCFKCHHCRKRISA---REFWIENGQPI 170
Query: 522 CRAC 525
C AC
Sbjct: 171 CAAC 174
Score = 130 (50.8 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 37/130 (28%), Positives = 56/130 (43%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
+A C C I + ++GK+YHP F C C +D F VD+ + C Y
Sbjct: 2 SASICCRCNEKIWPRAVCSLGKTYHPHHFTCKECGLVVDPKLFFA-VDDDVVCSECYLDK 60
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
A +C+AC TP+ E V + ++ +H C+ C C L + + G L
Sbjct: 61 HAARCSACR---TPI--LERGV--AAAERKWHEKCFRCVSCSKSLVSAS---FFEVNGYL 110
Query: 521 MCRACHLSHL 530
C+A H L
Sbjct: 111 FCKA-HFREL 119
Score = 121 (47.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 45/166 (27%), Positives = 68/166 (40%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
IC C EK+ C ++G YH + F C CG + K F+ V V C E YL
Sbjct: 5 ICCRCNEKIWPRA-VC-SLGKTYHPHHFTCKECGLVVDPKLFFAVDDDVVCSECYL---- 58
Query: 378 QQTAEKCAICGHLIME--MYSGFQQTAEKCAIC----GHLIMEMILQAMGKSYHPGCFRC 431
+ A +C+ C I+E + + ++ EKC C L+ + G + FR
Sbjct: 59 DKHAARCSACRTPILERGVAAAERKWHEKCFRCVSCSKSLVSASFFEVNGYLFCKAHFRE 118
Query: 432 CLCNECLDGVPFTVDVDNKIYCVNDYH-RMFAPKCAACGKGITPVE 476
+ C G +D + +H + F KC C K I+ E
Sbjct: 119 LFSSRCA-GCEKPIDRRAVVALSTKWHAKCF--KCHHCRKRISARE 161
>ZFIN|ZDB-GENE-040121-6 [details] [associations]
symbol:ldb3a "LIM-domain binding factor 3a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0007507 "heart development" evidence=IMP]
[GO:0001756 "somitogenesis" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 ZFIN:ZDB-GENE-040121-6 GO:GO:0007507
GO:GO:0046872 GO:GO:0008270 GO:GO:0001756 Gene3D:2.10.110.10
SUPFAM:SSF50156 HOGENOM:HOG000220936 HOVERGEN:HBG051478
EMBL:DQ012157 IPI:IPI00770690 UniGene:Dr.76474
ProteinModelPortal:Q4ZGL7 SMR:Q4ZGL7 PRIDE:Q4ZGL7 InParanoid:Q4ZGL7
ArrayExpress:Q4ZGL7 Bgee:Q4ZGL7 Uniprot:Q4ZGL7
Length = 649
Score = 173 (66.0 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 36/98 (36%), Positives = 52/98 (53%)
Query: 405 CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPK 464
CA C ++I L A+G+S+HP F C C+ L V F V+ N +YC N Y FAP
Sbjct: 473 CATCNNIIRGPFLVALGRSWHPEEFNCHYCHTSLADVSF-VEEQNNVYCENCYEEFFAPT 531
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG 502
CA C T + G E + ++ + +H C++C CG
Sbjct: 532 CARCS---TKIMG--EVMH--ALRQTWHTTCFVCAACG 562
Score = 130 (50.8 bits), Expect = 1.9e-05, Sum P(2) = 1.9e-05
Identities = 29/100 (29%), Positives = 45/100 (45%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C K+ G + A+ +HT CF+C +CG+ F+ G YCE+DY+ + F
Sbjct: 532 CARCSTKIMG--EVMHALRQTWHTTCFVCAACGKPFGNSLFHMEDGEPYCEKDYI-ALFS 588
Query: 379 QTAEKCAI---CGHLIMEMYSG-FQQTAEKCAICGHLIME 414
C G +E + T CA+C H+ +E
Sbjct: 589 TKCHGCDFPVEAGDKFIEALGHTWHDTCFVCAVC-HVNLE 627
Score = 49 (22.3 bits), Expect = 3.6e-10, Sum P(2) = 3.6e-10
Identities = 20/78 (25%), Positives = 36/78 (46%)
Query: 165 QPQVPQGLKYIRDYPP-YEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPP-- 221
QP + Q ++ PP ++ PP+++ + +PP P+ +H + I + PP
Sbjct: 288 QPPLMQQPPLMQQPPPMHQHPPMHQP-PPMQQPPLMQQPPPM---QHSSIQIPVGPPPPK 343
Query: 222 VYSRANTVTSKAVPVKTA 239
V S A T+ + P A
Sbjct: 344 VVSTA-TIMPASYPAGPA 360
Score = 44 (20.5 bits), Expect = 1.2e-09, Sum P(2) = 1.2e-09
Identities = 15/75 (20%), Positives = 30/75 (40%)
Query: 179 PPYEAPPVYENIQELNKPP---KPGPQ---VPVFGGEHRQMAIALTSPPVYSRANT-VTS 231
PP + PP+ + + +PP +P P P+ Q + PP ++ +
Sbjct: 278 PPMQQPPLMQQPPLMQQPPLMQQPPPMHQHPPMHQPPPMQQPPLMQQPPPMQHSSIQIPV 337
Query: 232 KAVPVKTATSLSVTP 246
P K ++ ++ P
Sbjct: 338 GPPPPKVVSTATIMP 352
Score = 38 (18.4 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 28/102 (27%), Positives = 36/102 (35%)
Query: 147 RGSYVSNDINAFQFDRKAQPQVPQGLKYIRDYP-PYEAPPVYENIQELNKPPKPGPQVPV 205
R +V++D A +FD P P I+ P P APP I P P P
Sbjct: 386 RPPWVTDDNFAQKFD----PSKPTPNTNIKVQPLPQAAPPPPSIISN----PVPAAPSPA 437
Query: 206 FGGEHRQMAIALTSPPVYSRANTVTSKAVPVKTATSLSVTPN 247
F A PPV +R ++ T L T N
Sbjct: 438 FNPAPPPFNPA-PFPPV-ARGVAQRAERFAASNRTPLCATCN 477
>UNIPROTKB|F5GYR0 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
HGNC:HGNC:19195 IPI:IPI01011329 ProteinModelPortal:F5GYR0
SMR:F5GYR0 Ensembl:ENST00000545242 ArrayExpress:F5GYR0 Bgee:F5GYR0
Uniprot:F5GYR0
Length = 571
Score = 176 (67.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 56/191 (29%), Positives = 86/191 (45%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G + +KC++
Sbjct: 92 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKECMCQKCSL--P 137
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
+ + + Q C CG I L A+ K +H GCF+C C + L+ + D
Sbjct: 138 VSVGSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAE--YISKD 195
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCYMCEDCGLQLTD 507
YC DYH F +C +C K IT G RV+ +K +H C +C CG Q+
Sbjct: 196 GLPYCEADYHAKFGIRCDSCEKYIT---G-----RVLEAGEKHYHPSCALCVRCG-QMFA 246
Query: 508 EPDKRCYPLQG 518
E ++ Y LQG
Sbjct: 247 EGEEM-Y-LQG 255
Score = 141 (54.7 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C CG ++ GQA A+ +H CF C SCG+ L + + + G YCE DY ++ F
Sbjct: 153 CGGCGTEIKN-GQALVALDKHWHLGCFKCKSCGKLLNAE-YISKDGLPYCEADY-HAKFG 209
Query: 379 QTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLIME---MILQAMGKS-YHPGC 428
+ C I G ++ + + C CG + E M LQ G S +HP C
Sbjct: 210 IRCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQ--GSSIWHPAC 263
Score = 139 (54.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
TA C CG++ +L+ K +H CF C C L F V I C DY R+
Sbjct: 20 TAILCNTCGNVCKGEVLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYI-CTLDYQRL 78
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR- 519
+ +C +C + I EG E V ++ K +H DC++C C L P R G+
Sbjct: 79 YGTRCFSCDQFI---EG--EVVS--ALGKTYHPDCFVCAVCRLPFP--PGDRV-TFNGKE 128
Query: 520 LMCRACHL 527
MC+ C L
Sbjct: 129 CMCQKCSL 136
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFTVDVDNKIYCVNDYHRM 460
+C C I ++ A+GK+YHP CF C +C D V F + C +
Sbjct: 82 RCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFN---GKECMCQKCSLPV 138
Query: 461 FAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLTDE 508
A +G+ G ++ +V++DK +H+ C+ C+ CG L E
Sbjct: 139 SVGSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAE 190
>UNIPROTKB|F8W6D8 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
HGNC:HGNC:19195 IPI:IPI01013991 ProteinModelPortal:F8W6D8
SMR:F8W6D8 Ensembl:ENST00000296372 ArrayExpress:F8W6D8 Bgee:F8W6D8
Uniprot:F8W6D8
Length = 573
Score = 176 (67.0 bits), Expect = 3.8e-10, P = 3.8e-10
Identities = 56/191 (29%), Positives = 86/191 (45%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G + +KC++
Sbjct: 92 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKECMCQKCSL--P 137
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
+ + + Q C CG I L A+ K +H GCF+C C + L+ + D
Sbjct: 138 VSVGSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAE--YISKD 195
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCYMCEDCGLQLTD 507
YC DYH F +C +C K IT G RV+ +K +H C +C CG Q+
Sbjct: 196 GLPYCEADYHAKFGIRCDSCEKYIT---G-----RVLEAGEKHYHPSCALCVRCG-QMFA 246
Query: 508 EPDKRCYPLQG 518
E ++ Y LQG
Sbjct: 247 EGEEM-Y-LQG 255
Score = 141 (54.7 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C CG ++ GQA A+ +H CF C SCG+ L + + + G YCE DY ++ F
Sbjct: 153 CGGCGTEIKN-GQALVALDKHWHLGCFKCKSCGKLLNAE-YISKDGLPYCEADY-HAKFG 209
Query: 379 QTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLIME---MILQAMGKS-YHPGC 428
+ C I G ++ + + C CG + E M LQ G S +HP C
Sbjct: 210 IRCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQ--GSSIWHPAC 263
Score = 139 (54.0 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
TA C CG++ +L+ K +H CF C C L F V I C DY R+
Sbjct: 20 TAILCNTCGNVCKGEVLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYI-CTLDYQRL 78
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR- 519
+ +C +C + I EG E V ++ K +H DC++C C L P R G+
Sbjct: 79 YGTRCFSCDQFI---EG--EVVS--ALGKTYHPDCFVCAVCRLPFP--PGDRV-TFNGKE 128
Query: 520 LMCRACHL 527
MC+ C L
Sbjct: 129 CMCQKCSL 136
Score = 121 (47.7 bits), Expect = 0.00041, P = 0.00041
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFTVDVDNKIYCVNDYHRM 460
+C C I ++ A+GK+YHP CF C +C D V F + C +
Sbjct: 82 RCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFN---GKECMCQKCSLPV 138
Query: 461 FAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLTDE 508
A +G+ G ++ +V++DK +H+ C+ C+ CG L E
Sbjct: 139 SVGSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAE 190
>UNIPROTKB|E2QUL4 [details] [associations]
symbol:LPXN "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050859 "negative regulation of B cell
receptor signaling pathway" evidence=IEA] [GO:0033628 "regulation
of cell adhesion mediated by integrin" evidence=IEA] [GO:0007162
"negative regulation of cell adhesion" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0002102 "podosome" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0007162 GO:GO:0002102
GO:GO:0003712 GO:GO:0033628 CTD:9404 OMA:GFHEKDK GO:GO:0050859
InterPro:IPR017305 PIRSF:PIRSF037881 EMBL:AAEX03011425
RefSeq:XP_540583.2 Ensembl:ENSCAFT00000012313 GeneID:483465
KEGG:cfa:483465 NextBio:20857851 Uniprot:E2QUL4
Length = 386
Score = 176 (67.0 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 52/184 (28%), Positives = 82/184 (44%)
Query: 347 CCSCGRALRGKAFYNV----HGR----VYCEEDYLYSGFQQTAEKCAICGHLIMEMYSGF 398
C SC + + GK + + H +C+E+ S F + + A C ++S
Sbjct: 152 CASCQKPIAGKVIHALGQAWHPEHFVCTHCKEEIGSSPFFERSG-LAYCSKDYHHLFS-- 208
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
+CA C I++ +L AM +++HP F C C E F + D K YC D+
Sbjct: 209 ----PRCAYCAAPILDRVLTAMNQTWHPEHFFCSHCGEVFGAEGFH-EKDKKPYCRKDFL 263
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
MF+PKC C + PV E + +MD +H +C++C DC + + L G
Sbjct: 264 AMFSPKCGGCNR---PV--LENYLS--AMDTVWHPECFVCGDC---FSSFSSGSFFELDG 313
Query: 519 RLMC 522
R C
Sbjct: 314 RPYC 317
Score = 142 (55.0 bits), Expect = 3.0e-06, Sum P(2) = 3.0e-06
Identities = 45/156 (28%), Positives = 67/156 (42%)
Query: 367 YCEEDYLYSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHP 426
+C E + GF + +K C + M+S KC C ++E L AM +HP
Sbjct: 239 HCGEVFGAEGFHEKDKK-PYCRKDFLAMFS------PKCGGCNRPVLENYLSAMDTVWHP 291
Query: 427 GCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVS 486
CF C C F ++D + YC YH+ C CG+ P+ G R +S
Sbjct: 292 ECFVCGDCFSSFSSGSF-FELDGRPYCELHYHQRRGTLCHGCGQ---PITG-----RCIS 342
Query: 487 -MDKDFHVDCYMCEDCGLQLT-----DEPDKR-CYP 515
M FH + ++C C QL+ ++ DK C P
Sbjct: 343 AMGHKFHPEHFVCAFCLTQLSKGIFREQDDKTYCQP 378
Score = 37 (18.1 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 6/14 (42%), Positives = 8/14 (57%)
Query: 186 VYENIQELNKPPKP 199
+Y +QE K P P
Sbjct: 71 IYSEVQEPKKTPHP 84
>ZFIN|ZDB-GENE-980526-484 [details] [associations]
symbol:lhx5 "LIM homeobox 5" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IMP;IDA] [GO:0001654 "eye development" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-484 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0030900 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0001654
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F EMBL:L42547
EMBL:BC098523 IPI:IPI00509409 RefSeq:NP_571293.1 UniGene:Dr.75068
ProteinModelPortal:P52889 SMR:P52889 STRING:P52889
Ensembl:ENSDART00000080693 GeneID:30465 KEGG:dre:30465 CTD:64211
InParanoid:P52889 OMA:SHQGQEM NextBio:20806859 Bgee:P52889
Uniprot:P52889
Length = 399
Score = 173 (66.0 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 41/126 (32%), Positives = 67/126 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC CN L F+ D K+YC D+ R F
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHAKCVQCCECNCNLTEKCFSRD--GKLYCKIDFFRRFGT 62
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 63 KCAGCLQGISP----SDLVRR-ARSKVFHLNCFTCMVCNKQLST--GEELYVIDENKFVC 115
Query: 523 RACHLS 528
+ +LS
Sbjct: 116 KEDYLS 121
>WB|WBGene00001132 [details] [associations]
symbol:alp-1 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0043050 "pharyngeal pumping"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0055120 "striated muscle dense body"
evidence=IDA] Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0008340 GO:GO:0046872 GO:GO:0055120
GO:GO:0008270 GO:GO:0040011 Gene3D:2.10.110.10 GO:GO:0043050
SUPFAM:SSF50156 GeneTree:ENSGT00690000101670 InterPro:IPR006643
SMART:SM00735 HSSP:P48059 EMBL:Z54237 EMBL:Z54235
RefSeq:NP_501533.2 GeneID:177701 KEGG:cel:CELE_T11B7.4 CTD:177701
NextBio:897990 PIR:T19156 RefSeq:NP_001023371.1
ProteinModelPortal:G5EFL5 SMR:G5EFL5 IntAct:G5EFL5 PRIDE:G5EFL5
EnsemblMetazoa:T11B7.4d.1 EnsemblMetazoa:T11B7.4d.2
WormBase:T11B7.4d OMA:GDESEMI Uniprot:G5EFL5
Length = 1424
Score = 177 (67.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 347 CCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIME----MYSGFQQ-T 401
C SC + +RG AF G+ +C E ++ + + CG + + S F+Q
Sbjct: 1251 CESCKQQIRG-AFVLATGKSWCPEHFVCAN-SSCRRRLLECGFVEEDGQKFCESCFEQHI 1308
Query: 402 AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
A +C C I+ L A+ K +HP CF C C + F ++ YC D++ +F
Sbjct: 1309 APRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLE-QGLPYCEQDWNALF 1367
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM 521
KC +C P+E + V ++ FH +C+ C C L E + G+
Sbjct: 1368 TTKCVSCRY---PIEAGDRWVE--ALGNAFHSNCFTCARCNHNLEGES---FFAKNGQPF 1419
Query: 522 CR 523
CR
Sbjct: 1420 CR 1421
Score = 53 (23.7 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 164 AQPQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQV--PVF---GGEHRQMAIALT 218
++ +P+ ++ P Y + P+ + +P +PG QV P + G + + L
Sbjct: 604 SEAAIPESNGVVKPIPSYASQPIGISKTSTPQPFRPGSQVERPHYSSVGLKDVHAPVPLP 663
Query: 219 SPPVYS----RANTVTSKAVPVKTATSLSVTPNYQ 249
P +S ++ V S V T+T+L T Q
Sbjct: 664 RSPQHSPQPVQSYIVRSSDANVTTSTNLQTTVTRQ 698
Score = 41 (19.5 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 192 ELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVKTATSLSVTP 246
++++P P P V FG + + A A P + + + AV + T S TP
Sbjct: 808 KIHEPSSPPPSVHKFGAVNTRAAPA---PVQFMQTPRI---AVKIHEPTGPSPTP 856
Score = 40 (19.1 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 15/50 (30%), Positives = 20/50 (40%)
Query: 193 LNKPPKPGPQVP-----VFGGEHRQMAIALTSPPVYSRANTVTSKAVPVK 237
LN+ KP P P V + I +T P RA+ S P+K
Sbjct: 729 LNRHTKPEPSTPLSVPTVSINDIATSPIKITEPSRPWRASVSNSATSPIK 778
>UNIPROTKB|G5EFL5 [details] [associations]
symbol:alp-1 "Protein ALP-1, isoform d" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0008340 GO:GO:0046872 GO:GO:0055120
GO:GO:0008270 GO:GO:0040011 Gene3D:2.10.110.10 GO:GO:0043050
SUPFAM:SSF50156 GeneTree:ENSGT00690000101670 InterPro:IPR006643
SMART:SM00735 HSSP:P48059 EMBL:Z54237 EMBL:Z54235
RefSeq:NP_501533.2 GeneID:177701 KEGG:cel:CELE_T11B7.4 CTD:177701
NextBio:897990 PIR:T19156 RefSeq:NP_001023371.1
ProteinModelPortal:G5EFL5 SMR:G5EFL5 IntAct:G5EFL5 PRIDE:G5EFL5
EnsemblMetazoa:T11B7.4d.1 EnsemblMetazoa:T11B7.4d.2
WormBase:T11B7.4d OMA:GDESEMI Uniprot:G5EFL5
Length = 1424
Score = 177 (67.4 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 347 CCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIME----MYSGFQQ-T 401
C SC + +RG AF G+ +C E ++ + + CG + + S F+Q
Sbjct: 1251 CESCKQQIRG-AFVLATGKSWCPEHFVCAN-SSCRRRLLECGFVEEDGQKFCESCFEQHI 1308
Query: 402 AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
A +C C I+ L A+ K +HP CF C C + F ++ YC D++ +F
Sbjct: 1309 APRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLE-QGLPYCEQDWNALF 1367
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM 521
KC +C P+E + V ++ FH +C+ C C L E + G+
Sbjct: 1368 TTKCVSCRY---PIEAGDRWVE--ALGNAFHSNCFTCARCNHNLEGES---FFAKNGQPF 1419
Query: 522 CR 523
CR
Sbjct: 1420 CR 1421
Score = 53 (23.7 bits), Expect = 3.9e-10, Sum P(2) = 3.9e-10
Identities = 22/95 (23%), Positives = 41/95 (43%)
Query: 164 AQPQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQV--PVF---GGEHRQMAIALT 218
++ +P+ ++ P Y + P+ + +P +PG QV P + G + + L
Sbjct: 604 SEAAIPESNGVVKPIPSYASQPIGISKTSTPQPFRPGSQVERPHYSSVGLKDVHAPVPLP 663
Query: 219 SPPVYS----RANTVTSKAVPVKTATSLSVTPNYQ 249
P +S ++ V S V T+T+L T Q
Sbjct: 664 RSPQHSPQPVQSYIVRSSDANVTTSTNLQTTVTRQ 698
Score = 41 (19.5 bits), Expect = 6.8e-09, Sum P(2) = 6.8e-09
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 192 ELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVKTATSLSVTP 246
++++P P P V FG + + A A P + + + AV + T S TP
Sbjct: 808 KIHEPSSPPPSVHKFGAVNTRAAPA---PVQFMQTPRI---AVKIHEPTGPSPTP 856
Score = 40 (19.1 bits), Expect = 8.6e-09, Sum P(2) = 8.6e-09
Identities = 15/50 (30%), Positives = 20/50 (40%)
Query: 193 LNKPPKPGPQVP-----VFGGEHRQMAIALTSPPVYSRANTVTSKAVPVK 237
LN+ KP P P V + I +T P RA+ S P+K
Sbjct: 729 LNRHTKPEPSTPLSVPTVSINDIATSPIKITEPSRPWRASVSNSATSPIK 778
>ZFIN|ZDB-GENE-980526-347 [details] [associations]
symbol:lhx1a "LIM homeobox 1a" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0001071 "nucleic acid
binding transcription factor activity" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0010842 "retina layer formation" evidence=ISS]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0043234
"protein complex" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0060059 "embryonic
retina morphogenesis in camera-type eye" evidence=ISS] [GO:0072049
"comma-shaped body morphogenesis" evidence=ISS] [GO:0072178
"nephric duct morphogenesis" evidence=ISS] [GO:0090009 "primitive
streak formation" evidence=ISS] [GO:2000543 "positive regulation of
gastrulation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0009953 "dorsal/ventral pattern formation" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0060429 "epithelium development" evidence=ISS] [GO:0072077
"renal vesicle morphogenesis" evidence=ISS] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0061205 "paramesonephric duct development"
evidence=ISS] [GO:0072050 "S-shaped body morphogenesis"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0021871 "forebrain regionalization"
evidence=ISS] [GO:0021937 "cerebellar Purkinje cell-granule cell
precursor cell signaling involved in regulation of granule cell
precursor cell proliferation" evidence=ISS] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-347 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0001764 GO:GO:0045893 GO:GO:0043234 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0060322 GO:GO:0001071 GO:GO:0001706 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 KO:K09372 OrthoDB:EOG405S1F GO:GO:0021937
GO:GO:0021871 GO:GO:0072178 GO:GO:0061205 GO:GO:2000744
GO:GO:0072077 EMBL:L37802 IPI:IPI00485723 RefSeq:NP_571291.1
UniGene:Dr.364 ProteinModelPortal:Q90476 SMR:Q90476 STRING:Q90476
Ensembl:ENSDART00000005641 GeneID:30463 KEGG:dre:30463 CTD:30463
InParanoid:Q90476 OMA:PSEMNEG NextBio:20806857 ArrayExpress:Q90476
Bgee:Q90476 Uniprot:Q90476
Length = 405
Score = 173 (66.0 bits), Expect = 4.1e-10, P = 4.1e-10
Identities = 40/127 (31%), Positives = 68/127 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHIKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRRFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----NDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSH 529
+ +LS+
Sbjct: 115 KDDYLSN 121
>UNIPROTKB|Q6H8Q1 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA;NAS] [GO:0008270 "zinc ion binding"
evidence=NAS] [GO:0015629 "actin cytoskeleton" evidence=IDA]
[GO:0007411 "axon guidance" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IDA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153
GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111045 GO:GO:0007411
GO:GO:0007010 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 HOGENOM:HOG000285997
EMBL:DQ413177 EMBL:AJ748600 EMBL:AJ748601 EMBL:AK094754
EMBL:AK094798 EMBL:AC097381 EMBL:AC104650 EMBL:AC114807
EMBL:BC067214 EMBL:BC122567 EMBL:AB058711 EMBL:AL834195
IPI:IPI00167702 IPI:IPI00187164 IPI:IPI00434484 IPI:IPI00479275
IPI:IPI00761095 IPI:IPI00892702 IPI:IPI00902561 IPI:IPI00910569
RefSeq:NP_001123555.1 RefSeq:NP_001123556.1 RefSeq:NP_001123557.1
RefSeq:NP_001123558.1 RefSeq:NP_001123559.1 RefSeq:NP_001123560.1
RefSeq:NP_115808.3 UniGene:Hs.233404 PDB:1V6G PDB:1WIG PDB:2L3X
PDBsum:1V6G PDBsum:1WIG PDBsum:2L3X ProteinModelPortal:Q6H8Q1
SMR:Q6H8Q1 IntAct:Q6H8Q1 STRING:Q6H8Q1 PhosphoSite:Q6H8Q1
DMDM:56404514 PaxDb:Q6H8Q1 PRIDE:Q6H8Q1 Ensembl:ENST00000318888
Ensembl:ENST00000341937 Ensembl:ENST00000361581
Ensembl:ENST00000361737 Ensembl:ENST00000407564
Ensembl:ENST00000428004 Ensembl:ENST00000505872
Ensembl:ENST00000514025 GeneID:84448 KEGG:hsa:84448 UCSC:uc003gkl.3
UCSC:uc003gko.3 UCSC:uc003gkp.3 UCSC:uc003gkq.3 UCSC:uc003gks.3
CTD:84448 GeneCards:GC04M007967 HGNC:HGNC:19195 HPA:HPA035808
MIM:612544 neXtProt:NX_Q6H8Q1 PharmGKB:PA134940437
EvolutionaryTrace:Q6H8Q1 GenomeRNAi:84448 NextBio:74223
ArrayExpress:Q6H8Q1 Bgee:Q6H8Q1 CleanEx:HS_ABLIM2
Genevestigator:Q6H8Q1 GermOnline:ENSG00000163995 GO:GO:0045111
Uniprot:Q6H8Q1
Length = 611
Score = 176 (67.0 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 56/191 (29%), Positives = 86/191 (45%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G + +KC++
Sbjct: 92 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKECMCQKCSL--P 137
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
+ + + Q C CG I L A+ K +H GCF+C C + L+ + D
Sbjct: 138 VSVGSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAE--YISKD 195
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCYMCEDCGLQLTD 507
YC DYH F +C +C K IT G RV+ +K +H C +C CG Q+
Sbjct: 196 GLPYCEADYHAKFGIRCDSCEKYIT---G-----RVLEAGEKHYHPSCALCVRCG-QMFA 246
Query: 508 EPDKRCYPLQG 518
E ++ Y LQG
Sbjct: 247 EGEEM-Y-LQG 255
Score = 141 (54.7 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C CG ++ GQA A+ +H CF C SCG+ L + + + G YCE DY ++ F
Sbjct: 153 CGGCGTEIKN-GQALVALDKHWHLGCFKCKSCGKLLNAE-YISKDGLPYCEADY-HAKFG 209
Query: 379 QTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLIME---MILQAMGKS-YHPGC 428
+ C I G ++ + + C CG + E M LQ G S +HP C
Sbjct: 210 IRCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQ--GSSIWHPAC 263
Score = 139 (54.0 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
TA C CG++ +L+ K +H CF C C L F V I C DY R+
Sbjct: 20 TAILCNTCGNVCKGEVLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYI-CTLDYQRL 78
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR- 519
+ +C +C + I EG E V ++ K +H DC++C C L P R G+
Sbjct: 79 YGTRCFSCDQFI---EG--EVVS--ALGKTYHPDCFVCAVCRLPFP--PGDRV-TFNGKE 128
Query: 520 LMCRACHL 527
MC+ C L
Sbjct: 129 CMCQKCSL 136
Score = 121 (47.7 bits), Expect = 0.00045, P = 0.00045
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFTVDVDNKIYCVNDYHRM 460
+C C I ++ A+GK+YHP CF C +C D V F + C +
Sbjct: 82 RCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFN---GKECMCQKCSLPV 138
Query: 461 FAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLTDE 508
A +G+ G ++ +V++DK +H+ C+ C+ CG L E
Sbjct: 139 SVGSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAE 190
>UNIPROTKB|E9PF39 [details] [associations]
symbol:ABLIM2 "Actin-binding LIM protein 2" species:9606
"Homo sapiens" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0030016 "myofibril"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153
GO:GO:0005634 GO:GO:0005737 GO:GO:0007010 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 EMBL:AC097381 EMBL:AC104650
EMBL:AC114807 RefSeq:NP_001123555.1 UniGene:Hs.233404 GeneID:84448
KEGG:hsa:84448 CTD:84448 HGNC:HGNC:19195 GenomeRNAi:84448
NextBio:74223 GO:GO:0045111 GO:GO:0030016 IPI:IPI00761132
ProteinModelPortal:E9PF39 SMR:E9PF39 Ensembl:ENST00000447017
UCSC:uc003gkj.4 OMA:FRHHYIP ArrayExpress:E9PF39 Bgee:E9PF39
Uniprot:E9PF39
Length = 645
Score = 176 (67.0 bits), Expect = 4.6e-10, P = 4.6e-10
Identities = 56/191 (29%), Positives = 86/191 (45%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G + +KC++
Sbjct: 92 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKECMCQKCSL--P 137
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
+ + + Q C CG I L A+ K +H GCF+C C + L+ + D
Sbjct: 138 VSVGSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAE--YISKD 195
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCYMCEDCGLQLTD 507
YC DYH F +C +C K IT G RV+ +K +H C +C CG Q+
Sbjct: 196 GLPYCEADYHAKFGIRCDSCEKYIT---G-----RVLEAGEKHYHPSCALCVRCG-QMFA 246
Query: 508 EPDKRCYPLQG 518
E ++ Y LQG
Sbjct: 247 EGEEM-Y-LQG 255
Score = 141 (54.7 bits), Expect = 3.2e-06, P = 3.2e-06
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C CG ++ GQA A+ +H CF C SCG+ L + + + G YCE DY ++ F
Sbjct: 153 CGGCGTEIKN-GQALVALDKHWHLGCFKCKSCGKLLNAE-YISKDGLPYCEADY-HAKFG 209
Query: 379 QTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLIME---MILQAMGKS-YHPGC 428
+ C I G ++ + + C CG + E M LQ G S +HP C
Sbjct: 210 IRCDSCEKYITGRVLEAGEKHYHPSCALCVRCGQMFAEGEEMYLQ--GSSIWHPAC 263
Score = 139 (54.0 bits), Expect = 5.2e-06, P = 5.2e-06
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
TA C CG++ +L+ K +H CF C C L F V I C DY R+
Sbjct: 20 TAILCNTCGNVCKGEVLRVQDKYFHIKCFVCKACGCDLAEGGFFVRQGEYI-CTLDYQRL 78
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR- 519
+ +C +C + I EG E V ++ K +H DC++C C L P R G+
Sbjct: 79 YGTRCFSCDQFI---EG--EVVS--ALGKTYHPDCFVCAVCRLPFP--PGDRV-TFNGKE 128
Query: 520 LMCRACHL 527
MC+ C L
Sbjct: 129 CMCQKCSL 136
Score = 121 (47.7 bits), Expect = 0.00048, P = 0.00048
Identities = 30/112 (26%), Positives = 49/112 (43%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFTVDVDNKIYCVNDYHRM 460
+C C I ++ A+GK+YHP CF C +C D V F + C +
Sbjct: 82 RCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFN---GKECMCQKCSLPV 138
Query: 461 FAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLTDE 508
A +G+ G ++ +V++DK +H+ C+ C+ CG L E
Sbjct: 139 SVGSSAHLSQGLRSCGGCGTEIKNGQALVALDKHWHLGCFKCKSCGKLLNAE 190
>UNIPROTKB|B7ZP59 [details] [associations]
symbol:lhx1 "Homeobox protein" species:8355 "Xenopus
laevis" [GO:0001071 "nucleic acid binding transcription factor
activity" evidence=ISS] [GO:0001655 "urogenital system development"
evidence=ISS] [GO:0001657 "ureteric bud development" evidence=ISS]
[GO:0001702 "gastrulation with mouth forming second" evidence=ISS]
[GO:0001705 "ectoderm formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0001764 "neuron migration"
evidence=ISS] [GO:0001822 "kidney development" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=ISS] [GO:0007267 "cell-cell
signaling" evidence=ISS] [GO:0007389 "pattern specification
process" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0009653 "anatomical structure morphogenesis"
evidence=ISS] [GO:0009791 "post-embryonic development"
evidence=ISS] [GO:0009880 "embryonic pattern specification"
evidence=ISS] [GO:0009948 "anterior/posterior axis specification"
evidence=ISS] [GO:0009952 "anterior/posterior pattern
specification" evidence=ISS] [GO:0009953 "dorsal/ventral pattern
formation" evidence=ISS] [GO:0010468 "regulation of gene
expression" evidence=ISS] [GO:0010842 "retina layer formation"
evidence=ISS] [GO:0021527 "spinal cord association neuron
differentiation" evidence=ISS] [GO:0021549 "cerebellum development"
evidence=ISS] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=ISS] [GO:0021871 "forebrain
regionalization" evidence=ISS] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=ISS]
[GO:0040019 "positive regulation of embryonic development"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0048646 "anatomical structure
formation involved in morphogenesis" evidence=ISS] [GO:0048703
"embryonic viscerocranium morphogenesis" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0060322 "head development" evidence=ISS] [GO:0060429
"epithelium development" evidence=ISS] [GO:0061205 "paramesonephric
duct development" evidence=ISS] [GO:0072049 "comma-shaped body
morphogenesis" evidence=ISS] [GO:0072050 "S-shaped body
morphogenesis" evidence=ISS] [GO:0072077 "renal vesicle
morphogenesis" evidence=ISS] [GO:0072178 "nephric duct
morphogenesis" evidence=ISS] [GO:0090009 "primitive streak
formation" evidence=ISS] [GO:0090190 "positive regulation of
branching involved in ureteric bud morphogenesis" evidence=ISS]
[GO:2000543 "positive regulation of gastrulation" evidence=ISS]
[GO:2000744 "positive regulation of anterior head development"
evidence=ISS] [GO:2000768 "positive regulation of nephron tubule
epithelial cell differentiation" evidence=ISS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0006366 GO:GO:0009791
GO:GO:0090190 GO:GO:0010842 GO:GO:0009953 GO:GO:0040019
GO:GO:0009880 GO:GO:0001657 GO:GO:0021527 GO:GO:0021702
GO:GO:0090009 GO:GO:0060059 GO:GO:2000768 GO:GO:0048703
GO:GO:0060322 GO:GO:0001071 GO:GO:0001706 GO:GO:0001705
GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 CTD:3975
HOVERGEN:HBG006263 KO:K09372 GO:GO:0021937 GO:GO:0021871
GO:GO:0072178 GO:GO:0061205 GO:GO:2000744 GO:GO:0072077
RefSeq:NP_001084128.1 UniGene:Xl.32655 GeneID:399323
KEGG:xla:399323 Xenbase:XB-GENE-856460 EMBL:BC169338 EMBL:BC169340
SMR:B7ZP59 Uniprot:B7ZP59
Length = 403
Score = 172 (65.6 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRRFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSH 529
+ +L++
Sbjct: 115 KEDYLNN 121
>UNIPROTKB|P29674 [details] [associations]
symbol:lhx1 "LIM/homeobox protein Lhx1" species:8355
"Xenopus laevis" [GO:0003002 "regionalization" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0007517 "muscle organ development" evidence=IMP]
[GO:0009798 "axis specification" evidence=IMP] [GO:0009952
"anterior/posterior pattern specification" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0030903 "notochord
development" evidence=IMP] [GO:0035565 "regulation of pronephros
size" evidence=IGI] [GO:0039003 "pronephric field specification"
evidence=IGI] [GO:0039020 "pronephric nephron tubule development"
evidence=IGI] [GO:0042074 "cell migration involved in gastrulation"
evidence=IMP] [GO:0043009 "chordate embryonic development"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0048793 "pronephros development" evidence=IGI;IMP] [GO:0072080
"nephron tubule development" evidence=IGI] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0022008 GO:GO:0009952 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045944 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0007517 GO:GO:0042074 GO:GO:0009798 GO:GO:0043009
GO:GO:0030903 GO:GO:0039020 GO:GO:0035565 CTD:3975
HOVERGEN:HBG006263 KO:K09372 EMBL:X63889 EMBL:AF013242 PIR:S23802
RefSeq:NP_001084128.1 UniGene:Xl.32655 ProteinModelPortal:P29674
SMR:P29674 GeneID:399323 KEGG:xla:399323 Xenbase:XB-GENE-856460
GO:GO:0039003 Uniprot:P29674
Length = 403
Score = 172 (65.6 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRRFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSH 529
+ +L++
Sbjct: 115 KEDYLNN 121
>UNIPROTKB|F1NX79 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0072049
"comma-shaped body morphogenesis" evidence=IEA] [GO:0072283
"metanephric renal vesicle morphogenesis" evidence=IEA] [GO:0072284
"metanephric S-shaped body morphogenesis" evidence=IEA] [GO:0090009
"primitive streak formation" evidence=IEA] [GO:0090190 "positive
regulation of branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:2000543 "positive regulation of gastrulation"
evidence=IEA] [GO:2000744 "positive regulation of anterior head
development" evidence=IEA] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=IEA]
[GO:0001658 "branching involved in ureteric bud morphogenesis"
evidence=IEA] [GO:0001705 "ectoderm formation" evidence=IEA]
[GO:0001706 "endoderm formation" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001823 "mesonephros development"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0009791 "post-embryonic development"
evidence=IEA] [GO:0009953 "dorsal/ventral pattern formation"
evidence=IEA] [GO:0021517 "ventral spinal cord development"
evidence=IEA] [GO:0021527 "spinal cord association neuron
differentiation" evidence=IEA] [GO:0021537 "telencephalon
development" evidence=IEA] [GO:0021702 "cerebellar Purkinje cell
differentiation" evidence=IEA] [GO:0021871 "forebrain
regionalization" evidence=IEA] [GO:0021937 "cerebellar Purkinje
cell-granule cell precursor cell signaling involved in regulation
of granule cell precursor cell proliferation" evidence=IEA]
[GO:0032525 "somite rostral/caudal axis specification"
evidence=IEA] [GO:0035846 "oviduct epithelium development"
evidence=IEA] [GO:0035847 "uterine epithelium development"
evidence=IEA] [GO:0035849 "nephric duct elongation" evidence=IEA]
[GO:0035852 "horizontal cell localization" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0048703 "embryonic viscerocranium
morphogenesis" evidence=IEA] [GO:0048793 "pronephros development"
evidence=IEA] [GO:0060059 "embryonic retina morphogenesis in
camera-type eye" evidence=IEA] [GO:0060067 "cervix development"
evidence=IEA] [GO:0060068 "vagina development" evidence=IEA]
[GO:0060322 "head development" evidence=IEA] [GO:0061205
"paramesonephric duct development" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0045892 GO:GO:0045893 GO:GO:0043234
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0006366
GO:GO:0090190 GO:GO:0040019 GO:GO:2000768 GO:GO:2000543
GeneTree:ENSGT00700000104177 IPI:IPI00581331 GO:GO:0021937
GO:GO:2000744 OMA:PSEMNEG EMBL:AADN02025742 EMBL:AADN02025743
EMBL:AADN02025744 Ensembl:ENSGALT00000008686 Uniprot:F1NX79
Length = 406
Score = 172 (65.6 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSH 529
+ +L++
Sbjct: 115 KEDYLNN 121
>UNIPROTKB|P53411 [details] [associations]
symbol:LHX1 "LIM/homeobox protein Lhx1" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0048703 "embryonic viscerocranium morphogenesis"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0001655
"urogenital system development" evidence=ISS] [GO:0001657 "ureteric
bud development" evidence=ISS] [GO:0001702 "gastrulation with mouth
forming second" evidence=ISS] [GO:0001705 "ectoderm formation"
evidence=ISS] [GO:2000744 "positive regulation of anterior head
development" evidence=ISS] [GO:0072178 "nephric duct morphogenesis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0001071 "nucleic acid binding
transcription factor activity" evidence=ISS;NAS] [GO:0090190
"positive regulation of branching involved in ureteric bud
morphogenesis" evidence=ISS] [GO:0001822 "kidney development"
evidence=ISS] [GO:0007267 "cell-cell signaling" evidence=ISS]
[GO:0007389 "pattern specification process" evidence=ISS]
[GO:0009653 "anatomical structure morphogenesis" evidence=ISS]
[GO:0009880 "embryonic pattern specification" evidence=ISS]
[GO:0009948 "anterior/posterior axis specification" evidence=ISS]
[GO:0009952 "anterior/posterior pattern specification"
evidence=ISS] [GO:0009953 "dorsal/ventral pattern formation"
evidence=ISS] [GO:0021549 "cerebellum development" evidence=ISS]
[GO:0021702 "cerebellar Purkinje cell differentiation"
evidence=ISS] [GO:0021871 "forebrain regionalization" evidence=ISS]
[GO:0021937 "cerebellar Purkinje cell-granule cell precursor cell
signaling involved in regulation of granule cell precursor cell
proliferation" evidence=ISS] [GO:2000768 "positive regulation of
nephron tubule epithelial cell differentiation" evidence=ISS]
[GO:0072049 "comma-shaped body morphogenesis" evidence=ISS]
[GO:0072050 "S-shaped body morphogenesis" evidence=ISS] [GO:0072077
"renal vesicle morphogenesis" evidence=ISS] [GO:0061205
"paramesonephric duct development" evidence=ISS] [GO:0060059
"embryonic retina morphogenesis in camera-type eye" evidence=ISS]
[GO:0010842 "retina layer formation" evidence=ISS] [GO:0048646
"anatomical structure formation involved in morphogenesis"
evidence=ISS] [GO:0060322 "head development" evidence=ISS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0043234 "protein complex" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0021517 "ventral spinal cord development"
evidence=IEP] [GO:0001764 "neuron migration" evidence=ISS]
[GO:0090009 "primitive streak formation" evidence=ISS] [GO:0001706
"endoderm formation" evidence=ISS] [GO:0060429 "epithelium
development" evidence=ISS] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEP] [GO:0008045 "motor neuron axon
guidance" evidence=IDA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISS] [GO:2000543 "positive
regulation of gastrulation" evidence=ISS] [GO:0009791
"post-embryonic development" evidence=ISS] [GO:0010468 "regulation
of gene expression" evidence=ISS] [GO:0021527 "spinal cord
association neuron differentiation" evidence=ISS] [GO:0072179
"nephric duct formation" evidence=NAS] [GO:2001141 "regulation of
RNA biosynthetic process" evidence=NAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0001764
GO:GO:0045893 GO:GO:0043234 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0021522 GO:GO:0006366
GO:GO:0009791 GO:GO:0090190 GO:GO:0010842 GO:GO:0009953
GO:GO:0040019 GO:GO:0009880 GO:GO:0001657 GO:GO:0021527
GO:GO:0021702 GO:GO:0090009 GO:GO:0060059 GO:GO:2000768
GO:GO:0048703 GO:GO:0060322 GO:GO:0001071 GO:GO:0001706
GO:GO:0001705 GO:GO:2000543 GO:GO:0072049 GO:GO:0072050 EMBL:L35569
IPI:IPI00581331 PIR:I50375 RefSeq:NP_990744.1 UniGene:Gga.789
ProteinModelPortal:P53411 SMR:P53411 STRING:P53411 GeneID:396381
KEGG:gga:396381 CTD:3975 eggNOG:NOG257130 HOGENOM:HOG000231630
HOVERGEN:HBG006263 InParanoid:P53411 KO:K09372 OrthoDB:EOG405S1F
NextBio:20816423 GO:GO:0021937 GO:GO:0021871 GO:GO:0072178
GO:GO:0061205 GO:GO:2000744 GO:GO:0072077 Uniprot:P53411
Length = 406
Score = 172 (65.6 bits), Expect = 5.3e-10, P = 5.3e-10
Identities = 39/127 (30%), Positives = 68/127 (53%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC ND+ R F
Sbjct: 4 CAGCKRPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKNDFFRCFGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C +GI+P + VR + K FH++C+ C C QL+ + Y + + + +C
Sbjct: 62 KCAGCAQGISP----SDLVRR-ARSKVFHLNCFTCMMCNKQLST--GEELYIIDENKFVC 114
Query: 523 RACHLSH 529
+ +L++
Sbjct: 115 KEDYLNN 121
>CGD|CAL0005717 [details] [associations]
symbol:orf19.7489 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0051286 "cell tip" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0032153 "cell division site" evidence=IEA]
[GO:0005935 "cellular bud neck" evidence=IEA] [GO:0005100 "Rho
GTPase activator activity" evidence=IEA] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0051666 "actin
cortical patch localization" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] [GO:0009272 "fungal-type cell wall
biogenesis" evidence=IEA] Pfam:PF00412 InterPro:IPR000198
InterPro:IPR001781 InterPro:IPR008936 InterPro:IPR015880
Pfam:PF00620 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50238
SMART:SM00132 SMART:SM00324 SMART:SM00355 CGD:CAL0005717
GO:GO:0007165 Gene3D:1.10.555.10 SUPFAM:SSF48350 GO:GO:0046872
GO:GO:0008270 GO:GO:0005622 Gene3D:2.10.110.10 EMBL:AACQ01000039
eggNOG:NOG267887 RefSeq:XP_718646.1 ProteinModelPortal:Q5AAK0
GeneID:3639727 KEGG:cal:CaO19.7489 Uniprot:Q5AAK0
Length = 1468
Score = 172 (65.6 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 60/212 (28%), Positives = 90/212 (42%)
Query: 331 QACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHL 390
Q +A+ N YH +CF C CG+ K F + E+D G T + A+C
Sbjct: 346 QFVRALNNAYHVDCFTCHECGKQCSAKFFPY---EITNEQD----G---TKTQVALCE-- 393
Query: 391 IMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNK 450
Y F++ C +C + + A+G YH FRC +C + + DN
Sbjct: 394 ----YDYFKKLDLICYVCNSALRGPYITALGNKYHLEHFRCNVCQRVFESDESYYEHDNN 449
Query: 451 IYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYM-------C---ED 500
IYC Y +++A C C I V+ E R ++ +H +CYM C +
Sbjct: 450 IYCHFHYSKLYASHCEGCQSSI--VKQFVELFRG-GRNQHWHPECYMVHKFWNVCITPDS 506
Query: 501 CGLQ-LTDEPDKRCYPLQGRLMCRACHLSHLS 531
GLQ L D PD L G + + + SH+S
Sbjct: 507 VGLQKLFDLPDD---VLNGLKLVKDDNESHIS 535
Score = 57 (25.1 bits), Expect = 5.7e-10, Sum P(2) = 5.7e-10
Identities = 13/38 (34%), Positives = 23/38 (60%)
Query: 164 AQPQVPQGLKYI--RDYPPYEAPPVYENIQELNKPPKP 199
++P+ Q L+Y RD PP + PP+ + + + K P+P
Sbjct: 140 SKPKREQSLRYYIPRDTPP-QTPPMSQLPKPVGKSPQP 176
>ZFIN|ZDB-GENE-030131-3570 [details] [associations]
symbol:lmo4b "LIM domain only 4b" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-030131-3570 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:P70662 HOVERGEN:HBG054231 EMBL:AF398515
IPI:IPI00497185 RefSeq:NP_997854.1 UniGene:Dr.78922
ProteinModelPortal:Q8JFQ1 SMR:Q8JFQ1 STRING:Q8JFQ1 GeneID:324849
KEGG:dre:324849 CTD:324849 InParanoid:Q8JFQ1 NextBio:20808994
ArrayExpress:Q8JFQ1 Uniprot:Q8JFQ1
Length = 165
Score = 151 (58.2 bits), Expect = 5.8e-10, P = 5.8e-10
Identities = 42/138 (30%), Positives = 62/138 (44%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGV-PFTVDVDNKIYCVNDYHRM 460
++CA CG I + +L AM +H C +C C L + F I C NDY R+
Sbjct: 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEIGTFCYTKSGMILCRNDYIRL 80
Query: 461 FAPK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
F C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G
Sbjct: 81 FGNSGACSACGQSI-PA--SELVMR--AQGNVYHLKCFTCSTCRNRLV--PGDRFHYING 133
Query: 519 RLMCRACHLSHLSRHHQS 536
L C + L H S
Sbjct: 134 SLFCEHDRPTALINGHLS 151
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A GN+YH CF C +C R + G F+ ++G ++CE D
Sbjct: 85 GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
>UNIPROTKB|F6QGM2 [details] [associations]
symbol:LHX3 "LIM/homeobox protein Lhx3" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0000988 "protein binding transcription factor
activity" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0008045 "motor neuron axon guidance"
evidence=IEA] [GO:0021520 "spinal cord motor neuron cell fate
specification" evidence=IEA] [GO:0021521 "ventral spinal cord
interneuron specification" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0021983
"pituitary gland development" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048839 "inner ear development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0043066 GO:GO:0030154 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667 Gene3D:2.10.110.10
GO:GO:0000988 EMBL:AADN02026398 IPI:IPI00820696
ProteinModelPortal:F6QGM2 Ensembl:ENSGALT00000006259
ArrayExpress:F6QGM2 Uniprot:F6QGM2
Length = 214
Score = 155 (59.6 bits), Expect = 6.4e-10, P = 6.4e-10
Identities = 40/134 (29%), Positives = 66/134 (49%)
Query: 405 CAICG-HLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C H++ IL+ + + +H C +C C L F+ + +YC D+ + F
Sbjct: 28 CAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQTQLAEKCFSRG--DGVYCKEDFFKRFGT 85
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQ-GRLMC 522
KCAAC +GI P + VR + D +H+ C+ C C QL + Y ++ RL+C
Sbjct: 86 KCAACQQGIPPTQ----VVRR-AQDFVYHLHCFACIVCKRQLATGDE--FYLMEDSRLVC 138
Query: 523 RACHLSHLSRHHQS 536
+A + + R +S
Sbjct: 139 KADYETAKQREAES 152
>UNIPROTKB|Q3ZBI6 [details] [associations]
symbol:FHL3 "Four and a half LIM domains protein 3"
species:9913 "Bos taurus" [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0030018 "Z disc" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003779 "actin binding"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005634
GO:GO:0030018 GO:GO:0046872 GO:GO:0030036 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0001725 eggNOG:NOG314122
HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 EMBL:BC103276 IPI:IPI00700515
RefSeq:NP_001029395.1 UniGene:Bt.52916 HSSP:Q13643
ProteinModelPortal:Q3ZBI6 SMR:Q3ZBI6 Ensembl:ENSBTAT00000009604
GeneID:504795 KEGG:bta:504795 CTD:2275 InParanoid:Q3ZBI6
OMA:QFTSRDD OrthoDB:EOG46144B NextBio:20866834 Uniprot:Q3ZBI6
Length = 280
Score = 166 (63.5 bits), Expect = 7.4e-10, P = 7.4e-10
Identities = 54/219 (24%), Positives = 88/219 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFI------CCSCGRALR-GKAFYNVHGRVYCEED 371
C C + CQ L +C+ C +CG + G G+ + E
Sbjct: 68 CCRCQRSLADEPFTCQD-SELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQTWHEHC 126
Query: 372 YLYSGFQQTAEKCAIC----GHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPG 427
+L SG +Q + H + Y + A +CA C + + + + +H
Sbjct: 127 FLCSGCEQPLGSRSFVPDKGAHYCVPCYEN--KFAPRCARCSKTLTQGGVTYRDQPWHRE 184
Query: 428 CFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM 487
C C C L G FT D+ YCV + +FAPKC++C + IT + G + VS
Sbjct: 185 CLVCTGCQTPLAGQQFTSREDDP-YCVTCFGELFAPKCSSCKRPITGLGGG----KYVSF 239
Query: 488 -DKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRAC 525
D+ +H C+ C C L + P +++C+ C
Sbjct: 240 EDRHWHHSCFSCARCSTSLVGQG---FVPDGDQVLCQGC 275
Score = 158 (60.7 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 37/130 (28%), Positives = 62/130 (47%)
Query: 398 FQQTAEKCA-ICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVND 456
F T +C + GH E+ + + +H GCFRCC C L PFT D+++ C +
Sbjct: 36 FANTCAECQQLIGHDSRELFYE--DRHFHEGCFRCCRCQRSLADEPFTCQ-DSELLCNDC 92
Query: 457 YHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL 516
Y F+ +C+ACG+ + P G+ ++ + +H C++C C L + P
Sbjct: 93 YCSAFSSQCSACGETVMP--GSR---KLEYGGQTWHEHCFLCSGCEQPLGS---RSFVPD 144
Query: 517 QGRLMCRACH 526
+G C C+
Sbjct: 145 KGAHYCVPCY 154
Score = 124 (48.7 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 34/103 (33%), Positives = 46/103 (44%)
Query: 429 FRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMD 488
F C C+E L G + + D+ YCV Y FA CA C + I G ++ + D
Sbjct: 5 FDCAKCSESLYGRKY-IQTDDGPYCVPCYDNTFANTCAECQQLI----G-HDSRELFYED 58
Query: 489 KDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLSHLS 531
+ FH C+ C C L DEP C L+C C+ S S
Sbjct: 59 RHFHEGCFRCCRCQRSLADEPFT-CQ--DSELLCNDCYCSAFS 98
>UNIPROTKB|B0WXP3 [details] [associations]
symbol:CpipJ_CPIJ012054 "LIM domain-binding protein"
species:7176 "Culex quinquefasciatus" [GO:0001952 "regulation of
cell-matrix adhesion" evidence=ISS] [GO:0015629 "actin
cytoskeleton" evidence=ISS] [GO:0051371 "muscle alpha-actinin
binding" evidence=ISS] Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 GO:GO:0046872 GO:GO:0015629
GO:GO:0008270 Gene3D:2.10.110.10 SUPFAM:SSF50156 GO:GO:0001952
eggNOG:NOG286537 InterPro:IPR006643 SMART:SM00735 GO:GO:0051371
OrthoDB:EOG4VDNDB EMBL:DS232170 RefSeq:XP_001862167.1
ProteinModelPortal:B0WXP3 EnsemblMetazoa:CPIJ012054-RA
GeneID:6044694 KEGG:cqu:CpipJ_CPIJ012054 VectorBase:CPIJ012054
HOGENOM:HOG000046926 OMA:ENELHQY PhylomeDB:B0WXP3 Uniprot:B0WXP3
Length = 2543
Score = 191 (72.3 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 49/183 (26%), Positives = 84/183 (45%)
Query: 346 ICCSCGRALRGKAFYNVHGRVYCEEDYL-YSGF--QQTAEKCAI--CGHLIMEMYSGFQQ 400
IC C + F GR++C + ++ ++G + A+ + G L E Y +
Sbjct: 2367 ICNKCNHKITTGPFITALGRIWCPDHFICHNGNCKRPLADIGFVEEKGDLYCE-YCFEEF 2425
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
A C+ C + L A+GK +HP CF+C C + PF ++ + YC D++ +
Sbjct: 2426 LAPVCSKCNARVKGDCLNAIGKQFHPECFKCTYCGKQFGNSPFFLE-EGDPYCETDWNEL 2484
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
F KC ACG PVE ++ V +++ ++H C+ C C L + + GR
Sbjct: 2485 FTTKCFACG---FPVEAGDKWVE--ALNNNYHSQCFNCTSCKKNLEGQS---FFAKGGRP 2536
Query: 521 MCR 523
C+
Sbjct: 2537 FCK 2539
Score = 41 (19.5 bits), Expect = 7.4e-10, Sum P(2) = 7.4e-10
Identities = 10/28 (35%), Positives = 15/28 (53%)
Query: 193 LNKPPKPGPQVPVFGGEHRQMAIALTSP 220
+NK PG +VP+ G +Q+ SP
Sbjct: 2115 MNKAVAPGGRVPLCGCCSQQIRCEKKSP 2142
Score = 40 (19.1 bits), Expect = 9.4e-10, Sum P(2) = 9.4e-10
Identities = 13/38 (34%), Positives = 20/38 (52%)
Query: 165 QPQVPQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQ 202
+P +P+ IR P E P E ++E PP+P P+
Sbjct: 1454 KPIIPE----IR-VPEPEPEPEPEQVEE---PPQPEPE 1483
Score = 37 (18.1 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 10/23 (43%), Positives = 10/23 (43%)
Query: 182 EAPPVYENIQELNKPPKPGPQVP 204
E PP E E KP K P P
Sbjct: 1475 EEPPQPEPEPEPEKPKKKLPPYP 1497
>MGI|MGI:2385758 [details] [associations]
symbol:Ablim2 "actin-binding LIM protein 2" species:10090
"Mus musculus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003779 "actin binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0015629 "actin
cytoskeleton" evidence=ISA] [GO:0030016 "myofibril" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 MGI:MGI:2385758
GO:GO:0007010 GO:GO:0046872 GO:GO:0015629 GO:GO:0008270
GO:GO:0045944 eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520
Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
GeneTree:ENSGT00700000104021 HOGENOM:HOG000285997 CTD:84448
EMBL:AJ748602 EMBL:AJ748603 EMBL:AY274116 EMBL:AK046243
EMBL:AK046879 EMBL:AK082707 EMBL:BC141125 IPI:IPI00226694
IPI:IPI00312739 IPI:IPI00463583 IPI:IPI00468743 IPI:IPI00480577
RefSeq:NP_001171168.1 RefSeq:NP_001171170.1 RefSeq:NP_001171171.1
RefSeq:NP_808346.3 UniGene:Mm.254446 ProteinModelPortal:Q8BL65
SMR:Q8BL65 STRING:Q8BL65 PhosphoSite:Q8BL65 PaxDb:Q8BL65
PRIDE:Q8BL65 DNASU:231148 Ensembl:ENSMUST00000054598
Ensembl:ENSMUST00000114204 Ensembl:ENSMUST00000114205
Ensembl:ENSMUST00000114206 Ensembl:ENSMUST00000114210 GeneID:231148
KEGG:mmu:231148 UCSC:uc008xeg.2 UCSC:uc012dve.1 UCSC:uc012dvf.1
UCSC:uc012dvh.1 OrthoDB:EOG4Z62NJ NextBio:380433 Bgee:Q8BL65
CleanEx:MM_ABLIM2 Genevestigator:Q8BL65
GermOnline:ENSMUSG00000029095 GO:GO:0030016 Uniprot:Q8BL65
Length = 612
Score = 173 (66.0 bits), Expect = 9.0e-10, P = 9.0e-10
Identities = 56/191 (29%), Positives = 84/191 (43%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G + +KC+
Sbjct: 92 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKECMCQKCS--PP 137
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
++ + Q C CG I L A+ K +H GCF+C C + L+ + D
Sbjct: 138 TLLGNSAHVAQGLRSCGGCGLEIKNGQALVALDKHWHLGCFKCKTCGKLLNAE--YISKD 195
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCYMCEDCGLQLTD 507
YC DYH F +C C K IT G RV+ +K +H C +C CG Q+
Sbjct: 196 GLPYCEADYHSKFGIRCDGCEKYIT---G-----RVLEAGEKHYHPSCALCVRCG-QMFS 246
Query: 508 EPDKRCYPLQG 518
E ++ Y LQG
Sbjct: 247 EGEEM-Y-LQG 255
Score = 123 (48.4 bits), Expect = 0.00027, P = 0.00027
Identities = 45/183 (24%), Positives = 71/183 (38%)
Query: 342 TNCFICCSCGRALRGKAF--YN--VHGRVY----CEEDYLYSGF-QQTAEKCAICGHLIM 392
+ +C +CG +G+ N H R + C D GF + E IC
Sbjct: 19 STAILCNTCGNVCKGEVLRVQNKYFHIRCFVCKACGCDLAEGGFFVRQGEH--ICTRDYQ 76
Query: 393 EMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFTVDVDN 449
+Y +C C I ++ A+GK+YHP CF C +C D V F
Sbjct: 77 RLYG------TRCFSCDRFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFN---GK 127
Query: 450 KIYCVNDYHRMFAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQL 505
+ C A +G+ G ++ +V++DK +H+ C+ C+ CG L
Sbjct: 128 ECMCQKCSPPTLLGNSAHVAQGLRSCGGCGLEIKNGQALVALDKHWHLGCFKCKTCGKLL 187
Query: 506 TDE 508
E
Sbjct: 188 NAE 190
>UNIPROTKB|C9JF46 [details] [associations]
symbol:LIMS1 "LIM and senescent cell
antigen-like-containing domain protein 1" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC012487
OrthoDB:EOG4NP73S EMBL:AC010095 IPI:IPI00917739 HGNC:HGNC:6616
HOGENOM:HOG000253950 ChiTaRS:LIMS1 ProteinModelPortal:C9JF46
SMR:C9JF46 STRING:C9JF46 PRIDE:C9JF46 Ensembl:ENST00000428064
ArrayExpress:C9JF46 Bgee:C9JF46 Uniprot:C9JF46
Length = 177
Score = 149 (57.5 bits), Expect = 9.5e-10, P = 9.5e-10
Identities = 40/128 (31%), Positives = 64/128 (50%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVNDYHR 459
T E+C G E I+ + G+ YH CF C C + +G+ + + + + YC +D+
Sbjct: 21 TCERCK-GGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFY--EFEGRKYCEHDFQM 77
Query: 460 MFAPKCAACGKGITPVEGTEETVRVV-SMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
+FAP C CG+ I G RV+ +M+ +H +C+ C+ C L D + G
Sbjct: 78 LFAPCCHQCGEFII---G-----RVIKAMNNSWHPECFRCDLCQEVLADIGFVKN---AG 126
Query: 519 RLMCRACH 526
R +CR CH
Sbjct: 127 RHLCRPCH 134
Score = 134 (52.2 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 47/169 (27%), Positives = 71/169 (42%)
Query: 343 NCFICCSCGRALRGKA----FYNVHGRVYCEEDYLYSG-FQQTAEKC--AICGHLIMEMY 395
N +C R G A N +G +Y E+ ++ + FQQ E G E
Sbjct: 15 NALASATCERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCE-- 72
Query: 396 SGFQQT-AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCV 454
FQ A C CG I+ +++AM S+HP CFRC LC E L + F + + C
Sbjct: 73 HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADIGFVKNAGRHL-CR 131
Query: 455 NDYHRMFAPKCAACGKGITP-VEGTEETVRVVSMDKDFHVDCYMCEDCG 502
++R K GK I + ++ + +H D + C +CG
Sbjct: 132 PCHNR---EKARGLGKYICQKCHAIIDEQPLIFKNDPYHPDHFNCANCG 177
Score = 132 (51.5 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 27/99 (27%), Positives = 42/99 (42%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C A + + G LYH CF+C C + FY GR YCE D+ F
Sbjct: 22 CERCKGGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQML-FA 80
Query: 379 QTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLIMEM 415
+C I G +I M + + +C +C ++ ++
Sbjct: 81 PCCHQCGEFIIGRVIKAMNNSWHPECFRCDLCQEVLADI 119
>WB|WBGene00006826 [details] [associations]
symbol:unc-97 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0010171
"body morphogenesis" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0019915 "lipid storage" evidence=IMP] [GO:0061199
"striated muscle contraction involved in embryonic body
morphogenesis" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0030163 "protein catabolic process"
evidence=IMP] [GO:0045216 "cell-cell junction organization"
evidence=IMP] [GO:0050954 "sensory perception of mechanical
stimulus" evidence=IMP] [GO:0007517 "muscle organ development"
evidence=IMP] [GO:0005912 "adherens junction" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008305 "integrin complex"
evidence=IDA] [GO:0055120 "striated muscle dense body"
evidence=IDA] [GO:0031430 "M band" evidence=IDA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0005634 GO:GO:0009792 GO:GO:0006898 GO:GO:0031430
GO:GO:0002119 GO:GO:0046872 GO:GO:0055120 GO:GO:0008270
GO:GO:0040011 Gene3D:2.10.110.10 GO:GO:0019915 GO:GO:0007517
GO:GO:0005912 GO:GO:0030163 GO:GO:0045216 eggNOG:NOG263350
GO:GO:0050954 GeneTree:ENSGT00690000101670 HOGENOM:HOG000253950
InterPro:IPR017351 PIRSF:PIRSF038003 OMA:ECFRCEL EMBL:FO080820
GO:GO:0061199 EMBL:AF035583 PIR:T16076 RefSeq:NP_508943.3
UniGene:Cel.19566 ProteinModelPortal:P50464 SMR:P50464
DIP:DIP-24818N IntAct:P50464 MINT:MINT-1050203 STRING:P50464
PaxDb:P50464 EnsemblMetazoa:F14D12.2.1 EnsemblMetazoa:F14D12.2.2
GeneID:180827 KEGG:cel:CELE_F14D12.2 UCSC:F14D12.2.1 CTD:180827
WormBase:F14D12.2 InParanoid:P50464 NextBio:911142 Uniprot:P50464
Length = 348
Score = 168 (64.2 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 43/142 (30%), Positives = 70/142 (49%)
Query: 389 HLIMEMYSGFQQTAEKCAIC--GHLIMEMILQAMGKSYHPGCFRCCLCNECL-DGVPFTV 445
H+ ++ GF+ C C G + + ++ + G+ +H CF C C E DG+ F
Sbjct: 7 HINGDLAHGFENMV--CVRCNDGFSMQDQMVNSSGQVWHSECFVCAQCFEPFPDGIYF-- 62
Query: 446 DVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVV-SMDKDFHVDCYMCEDCGLQ 504
+ + + YC +D+H +F+P C C + I G RV+ +M+ +H C+ CE C Q
Sbjct: 63 EYEGRKYCEHDFHVLFSPCCGKCNEFIV---G-----RVIKAMNASWHPGCFCCEICNKQ 114
Query: 505 LTDEPDKRCYPLQGRLMCRACH 526
L D R GR +CR C+
Sbjct: 115 LADVGFLRN---AGRALCRECN 133
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 31/122 (25%), Positives = 52/122 (42%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + + Q + G ++H+ CF+C C ++ GR YCE D+ + F
Sbjct: 20 VCVRCNDGFSMQDQMVNSSGQVWHSECFVCAQCFEPFPDGIYFEYEGRKYCEHDF-HVLF 78
Query: 378 QQTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLIMEM-ILQAMGKSYHPGCFRCCLC 434
KC I G +I M + + C IC + ++ L+ G++ C C
Sbjct: 79 SPCCGKCNEFIVGRVIKAMNASWHPGCFCCEICNKQLADVGFLRNAGRAL------CREC 132
Query: 435 NE 436
NE
Sbjct: 133 NE 134
Score = 124 (48.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 51/213 (23%), Positives = 82/213 (38%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRAL--RGKAFYNVHGRVY-CEEDYLY 374
+C C E+ AG G C G+ + RG +F+ H + C +
Sbjct: 128 LCRECNEREKAAGH-----GRYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTT 182
Query: 375 SGFQQTAEK-CAICGHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCL 433
+ + E C C H M + C C I E ++ A+GK +H F C +
Sbjct: 183 ASREVNGELYCLRC-HDTMGI--------PICGACHRPIEERVIAALGKHWHVEHFVCSV 233
Query: 434 CNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHV 493
C + G + YC +H++F C CG P G E + ++ K + V
Sbjct: 234 CEKPFLGHRH-YERKGLPYCEQHFHKLFGNLCFKCGD---PCCG--EVFQ--ALQKTWCV 285
Query: 494 DCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACH 526
C+ C C +L D+ K Y + C+ C+
Sbjct: 286 KCFSCSFCDKKL-DQKTK-FYEFDMKPTCKRCY 316
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 34/132 (25%), Positives = 55/132 (41%)
Query: 405 CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC--VNDYHRMFA 462
C C I+ +++AM S+HPGCF C +CN+ L V F + + C N+ +
Sbjct: 82 CGKCNEFIVGRVIKAMNASWHPGCFCCEICNKQLADVGFLRNAGRAL-CRECNEREKAAG 140
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDK--------RCY 514
C K ++ + + FH + C+ C +LT + RC+
Sbjct: 141 HGRYVCHKCHAMIDDGQH---IKFRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRCH 197
Query: 515 PLQGRLMCRACH 526
G +C ACH
Sbjct: 198 DTMGIPICGACH 209
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 368 CEEDYLYSGFQQTAEK--CAICGHLIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSY 424
C + GF + A + C C E +G + C C +I + ++ G S+
Sbjct: 111 CNKQLADVGFLRNAGRALCRECNE--REKAAGHGRYV--CHKCHAMIDDGQHIKFRGDSF 166
Query: 425 HPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
HP F+C CN L + +V+ ++YC+ + M P C AC + P+E E V +
Sbjct: 167 HPYHFKCKRCNNELTTA--SREVNGELYCLRCHDTMGIPICGACHR---PIE---ERV-I 217
Query: 485 VSMDKDFHVDCYMCEDC 501
++ K +HV+ ++C C
Sbjct: 218 AALGKHWHVEHFVCSVC 234
>UNIPROTKB|P50464 [details] [associations]
symbol:unc-97 "LIM domain-containing protein unc-97"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] [GO:0017022 "myosin binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0005634 GO:GO:0009792 GO:GO:0006898
GO:GO:0031430 GO:GO:0002119 GO:GO:0046872 GO:GO:0055120
GO:GO:0008270 GO:GO:0040011 Gene3D:2.10.110.10 GO:GO:0019915
GO:GO:0007517 GO:GO:0005912 GO:GO:0030163 GO:GO:0045216
eggNOG:NOG263350 GO:GO:0050954 GeneTree:ENSGT00690000101670
HOGENOM:HOG000253950 InterPro:IPR017351 PIRSF:PIRSF038003
OMA:ECFRCEL EMBL:FO080820 GO:GO:0061199 EMBL:AF035583 PIR:T16076
RefSeq:NP_508943.3 UniGene:Cel.19566 ProteinModelPortal:P50464
SMR:P50464 DIP:DIP-24818N IntAct:P50464 MINT:MINT-1050203
STRING:P50464 PaxDb:P50464 EnsemblMetazoa:F14D12.2.1
EnsemblMetazoa:F14D12.2.2 GeneID:180827 KEGG:cel:CELE_F14D12.2
UCSC:F14D12.2.1 CTD:180827 WormBase:F14D12.2 InParanoid:P50464
NextBio:911142 Uniprot:P50464
Length = 348
Score = 168 (64.2 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 43/142 (30%), Positives = 70/142 (49%)
Query: 389 HLIMEMYSGFQQTAEKCAIC--GHLIMEMILQAMGKSYHPGCFRCCLCNECL-DGVPFTV 445
H+ ++ GF+ C C G + + ++ + G+ +H CF C C E DG+ F
Sbjct: 7 HINGDLAHGFENMV--CVRCNDGFSMQDQMVNSSGQVWHSECFVCAQCFEPFPDGIYF-- 62
Query: 446 DVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVV-SMDKDFHVDCYMCEDCGLQ 504
+ + + YC +D+H +F+P C C + I G RV+ +M+ +H C+ CE C Q
Sbjct: 63 EYEGRKYCEHDFHVLFSPCCGKCNEFIV---G-----RVIKAMNASWHPGCFCCEICNKQ 114
Query: 505 LTDEPDKRCYPLQGRLMCRACH 526
L D R GR +CR C+
Sbjct: 115 LADVGFLRN---AGRALCRECN 133
Score = 128 (50.1 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 31/122 (25%), Positives = 52/122 (42%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + + Q + G ++H+ CF+C C ++ GR YCE D+ + F
Sbjct: 20 VCVRCNDGFSMQDQMVNSSGQVWHSECFVCAQCFEPFPDGIYFEYEGRKYCEHDF-HVLF 78
Query: 378 QQTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLIMEM-ILQAMGKSYHPGCFRCCLC 434
KC I G +I M + + C IC + ++ L+ G++ C C
Sbjct: 79 SPCCGKCNEFIVGRVIKAMNASWHPGCFCCEICNKQLADVGFLRNAGRAL------CREC 132
Query: 435 NE 436
NE
Sbjct: 133 NE 134
Score = 124 (48.7 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 51/213 (23%), Positives = 82/213 (38%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRAL--RGKAFYNVHGRVY-CEEDYLY 374
+C C E+ AG G C G+ + RG +F+ H + C +
Sbjct: 128 LCRECNEREKAAGH-----GRYVCHKCHAMIDDGQHIKFRGDSFHPYHFKCKRCNNELTT 182
Query: 375 SGFQQTAEK-CAICGHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCL 433
+ + E C C H M + C C I E ++ A+GK +H F C +
Sbjct: 183 ASREVNGELYCLRC-HDTMGI--------PICGACHRPIEERVIAALGKHWHVEHFVCSV 233
Query: 434 CNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHV 493
C + G + YC +H++F C CG P G E + ++ K + V
Sbjct: 234 CEKPFLGHRH-YERKGLPYCEQHFHKLFGNLCFKCGD---PCCG--EVFQ--ALQKTWCV 285
Query: 494 DCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACH 526
C+ C C +L D+ K Y + C+ C+
Sbjct: 286 KCFSCSFCDKKL-DQKTK-FYEFDMKPTCKRCY 316
Score = 120 (47.3 bits), Expect = 0.00024, P = 0.00024
Identities = 34/132 (25%), Positives = 55/132 (41%)
Query: 405 CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC--VNDYHRMFA 462
C C I+ +++AM S+HPGCF C +CN+ L V F + + C N+ +
Sbjct: 82 CGKCNEFIVGRVIKAMNASWHPGCFCCEICNKQLADVGFLRNAGRAL-CRECNEREKAAG 140
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDK--------RCY 514
C K ++ + + FH + C+ C +LT + RC+
Sbjct: 141 HGRYVCHKCHAMIDDGQH---IKFRGDSFHPYHFKCKRCNNELTTASREVNGELYCLRCH 197
Query: 515 PLQGRLMCRACH 526
G +C ACH
Sbjct: 198 DTMGIPICGACH 209
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 37/137 (27%), Positives = 64/137 (46%)
Query: 368 CEEDYLYSGFQQTAEK--CAICGHLIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSY 424
C + GF + A + C C E +G + C C +I + ++ G S+
Sbjct: 111 CNKQLADVGFLRNAGRALCRECNE--REKAAGHGRYV--CHKCHAMIDDGQHIKFRGDSF 166
Query: 425 HPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
HP F+C CN L + +V+ ++YC+ + M P C AC + P+E E V +
Sbjct: 167 HPYHFKCKRCNNELTTA--SREVNGELYCLRCHDTMGIPICGACHR---PIE---ERV-I 217
Query: 485 VSMDKDFHVDCYMCEDC 501
++ K +HV+ ++C C
Sbjct: 218 AALGKHWHVEHFVCSVC 234
>UNIPROTKB|E1C5J6 [details] [associations]
symbol:LPXN "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0002102
"podosome" evidence=IEA] [GO:0003712 "transcription cofactor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005925 "focal adhesion" evidence=IEA]
[GO:0007162 "negative regulation of cell adhesion" evidence=IEA]
[GO:0033628 "regulation of cell adhesion mediated by integrin"
evidence=IEA] [GO:0050859 "negative regulation of B cell receptor
signaling pathway" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104021
GO:GO:0007162 GO:GO:0002102 GO:GO:0003712 GO:GO:0033628 OMA:GFHEKDK
GO:GO:0050859 EMBL:AADN02050741 EMBL:AADN02050742 IPI:IPI00588336
Ensembl:ENSGALT00000032676 Uniprot:E1C5J6
Length = 308
Score = 166 (63.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 38/108 (35%), Positives = 56/108 (51%)
Query: 402 AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
A CA C I + A+G+++HP F C C + L G PF + + YC DYH+ F
Sbjct: 72 AAVCAACHKPIAGKMFTALGETWHPEHFTCARCGQELGGQPF-FERGGQAYCEEDYHQAF 130
Query: 462 APKCAACGKGITPVEGTEETVRVVS-MDKDFHVDCYMCEDCGLQLTDE 508
+P+CA C G P+ RV+S MD+ +H + + C CG D+
Sbjct: 131 SPRCAYCA-G--PIRE-----RVLSAMDQTWHPEHFFCAHCGKVFGDD 170
Score = 149 (57.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 65/232 (28%), Positives = 90/232 (38%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + + AG+ A+G +H F C CG+ L G+ F+ G+ YCEEDY + F
Sbjct: 74 VCAACHKPI--AGKMFTALGETWHPEHFTCARCGQELGGQPFFERGGQAYCEEDY-HQAF 130
Query: 378 QQTAEKCAICGHLIME-MYSGFQQTAEK----CAICGHLIMEMILQAMGKSYHPGCFR-- 430
+ +CA C I E + S QT CA CG + + G P CF+
Sbjct: 131 ---SPRCAYCAGPIRERVLSAMDQTWHPEHFFCAHCGKVFGDDGFHERGGK--PYCFQDF 185
Query: 431 -CCLCNECLDGV--PFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM 487
+C G P T DN + + CA C T E R
Sbjct: 186 VVLFAPKC-QGCERPLT---DNYLSALQGVWHPECFVCADCLSSFTNGSFFELEGRPYC- 240
Query: 488 DKDFHV-DCYMCEDCGLQLTDEPDKRCYPLQGR------LMCRACHLSHLSR 532
+ FH +C CG +T RC GR +C C LS L +
Sbjct: 241 ELHFHQRQGSVCHGCGHPITG----RCITAAGRKYHPEHFICAYC-LSQLHK 287
Score = 119 (46.9 bits), Expect = 0.00024, P = 0.00024
Identities = 32/126 (25%), Positives = 55/126 (43%)
Query: 402 AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
A KC C + + L A+ +HP CF C C F +++ + YC +H+
Sbjct: 190 APKCQGCERPLTDNYLSALQGVWHPECFVCADCLSSFTNGSF-FELEGRPYCELHFHQRQ 248
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG-RL 520
C CG P+ G + + + +H + ++C C QL K + +G ++
Sbjct: 249 GSVCHGCGH---PITGR----CITAAGRKYHPEHFICAYCLSQL----HKGTFRERGDKM 297
Query: 521 MCRACH 526
C+ACH
Sbjct: 298 YCQACH 303
>UNIPROTKB|G5EEL1 [details] [associations]
symbol:alp-1 "Protein ALP-1, isoform b" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0008340 GO:GO:0046872 GO:GO:0055120
GO:GO:0008270 GO:GO:0040011 Gene3D:2.10.110.10 GO:GO:0043050
SUPFAM:SSF50156 GeneTree:ENSGT00690000101670 InterPro:IPR006643
SMART:SM00735 HSSP:P48059 EMBL:Z54237 EMBL:Z54235 GeneID:177701
KEGG:cel:CELE_T11B7.4 CTD:177701 NextBio:897990 PIR:T19157
RefSeq:NP_501534.2 ProteinModelPortal:G5EEL1 SMR:G5EEL1
IntAct:G5EEL1 PRIDE:G5EEL1 EnsemblMetazoa:T11B7.4b.1
EnsemblMetazoa:T11B7.4b.2 WormBase:T11B7.4b Uniprot:G5EEL1
Length = 645
Score = 177 (67.4 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 49/182 (26%), Positives = 79/182 (43%)
Query: 347 CCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGHLIME----MYSGFQQ-T 401
C SC + +RG AF G+ +C E ++ + + CG + + S F+Q
Sbjct: 472 CESCKQQIRG-AFVLATGKSWCPEHFVCAN-SSCRRRLLECGFVEEDGQKFCESCFEQHI 529
Query: 402 AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
A +C C I+ L A+ K +HP CF C C + F ++ YC D++ +F
Sbjct: 530 APRCNKCSKPIISDCLNALQKKWHPTCFTCAHCQKPFGNSAFYLE-QGLPYCEQDWNALF 588
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM 521
KC +C P+E + V ++ FH +C+ C C L E + G+
Sbjct: 589 TTKCVSCRY---PIEAGDRWVE--ALGNAFHSNCFTCARCNHNLEGES---FFAKNGQPF 640
Query: 522 CR 523
CR
Sbjct: 641 CR 642
Score = 39 (18.8 bits), Expect = 1.4e-09, Sum P(2) = 1.4e-09
Identities = 12/54 (22%), Positives = 20/54 (37%)
Query: 196 PPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVKTATSLSVTPNYQ 249
PP P P G + + + T+ + NT +A + L+ T Q
Sbjct: 410 PPVPSNPPPSNGSSYTKTSFERTTTETRPQQNTGAPRAGDFRGTGHLTTTTTTQ 463
>RGD|1307180 [details] [associations]
symbol:Fhl3 "four and a half LIM domains 3" species:10116
"Rattus norvegicus" [GO:0001725 "stress fiber" evidence=IEA;ISO]
[GO:0003779 "actin binding" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA;ISO] [GO:0030036 "actin
cytoskeleton organization" evidence=IEA;ISO] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
RGD:1307180 GO:GO:0005634 GO:GO:0030018 GO:GO:0046872 GO:GO:0030036
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0001725 EMBL:CH473968
GeneTree:ENSGT00690000101670 CTD:2275 OMA:QFTSRDD OrthoDB:EOG46144B
IPI:IPI00191454 RefSeq:NP_001101449.1 UniGene:Rn.229136
Ensembl:ENSRNOT00000010007 GeneID:313582 KEGG:rno:313582
UCSC:RGD:1307180 NextBio:666470 Uniprot:D3ZPF0
Length = 288
Score = 164 (62.8 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 55/223 (24%), Positives = 88/223 (39%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFI------CCSCGRALR-GKAFYNVHGRVYCEED 371
C C + CQ L C+ C +CG + G G+ + E
Sbjct: 68 CCRCQRSLADEPFTCQD-SELLCNECYCTAFSSQCSACGETVMPGSRKLEYGGQTWHEHC 126
Query: 372 YLYSGFQQTAEKCAIC----GHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPG 427
+L SG +Q + H + Y + A +CA C + + + + +H
Sbjct: 127 FLCSGCEQPLGSRSFVPDKGAHYCVPCYEN--KFAPRCARCSKTLTQGGVTYRDQPWHRE 184
Query: 428 CFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETV----R 483
C C C L G FT D+ YCV + +FAPKC++C + IT G+E +
Sbjct: 185 CLVCTGCQTPLAGQQFT-SRDDDPYCVACFGELFAPKCSSCKRPITGGSGSEGAGLGGGK 243
Query: 484 VVSM-DKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRAC 525
VS D+ +H C+ C C L + P +++C+ C
Sbjct: 244 YVSFEDRHWHHSCFSCARCSTSLVGQG---FVPDGDQVLCQGC 283
Score = 157 (60.3 bits), Expect = 9.7e-09, P = 9.7e-09
Identities = 37/130 (28%), Positives = 61/130 (46%)
Query: 398 FQQTAEKCA-ICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVND 456
F T +C + GH E+ + + +H GCFRCC C L PFT D+++ C
Sbjct: 36 FANTCAECQQLIGHDSRELFYE--DRHFHEGCFRCCRCQRSLADEPFTCQ-DSELLCNEC 92
Query: 457 YHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL 516
Y F+ +C+ACG+ + P G+ ++ + +H C++C C L + P
Sbjct: 93 YCTAFSSQCSACGETVMP--GSR---KLEYGGQTWHEHCFLCSGCEQPLGS---RSFVPD 144
Query: 517 QGRLMCRACH 526
+G C C+
Sbjct: 145 KGAHYCVPCY 154
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 34/103 (33%), Positives = 46/103 (44%)
Query: 429 FRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMD 488
F C CNE L G + + D+ YCV Y FA CA C + I G ++ + D
Sbjct: 5 FDCAKCNESLYGRKY-IQTDSGPYCVPCYDNTFANTCAECQQLI----G-HDSRELFYED 58
Query: 489 KDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLSHLS 531
+ FH C+ C C L DEP C L+C C+ + S
Sbjct: 59 RHFHEGCFRCCRCQRSLADEPFT-CQ--DSELLCNECYCTAFS 98
>ZFIN|ZDB-GENE-050522-236 [details] [associations]
symbol:lims1 "LIM and senescent cell antigen-like
domains 1" species:7955 "Danio rerio" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0014704 "intercalated disc"
evidence=IDA] [GO:0051896 "regulation of protein kinase B signaling
cascade" evidence=IMP] [GO:0060047 "heart contraction"
evidence=IMP] [GO:0030018 "Z disc" evidence=IDA] [GO:0046872 "metal
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-050522-236 GO:GO:0014704 GO:GO:0030018 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 GO:GO:0060047 GO:GO:0051896
eggNOG:NOG263350 OrthoDB:EOG4NP73S CTD:3987 HOGENOM:HOG000253950
HOVERGEN:HBG000053 InterPro:IPR017351 PIRSF:PIRSF038003
EMBL:BC095840 IPI:IPI00506748 RefSeq:NP_001019560.1
UniGene:Dr.106257 ProteinModelPortal:Q501W5 SMR:Q501W5
STRING:Q501W5 GeneID:554019 KEGG:dre:554019 InParanoid:Q501W5
NextBio:20880596 ArrayExpress:Q501W5 Uniprot:Q501W5
Length = 336
Score = 166 (63.5 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 63/207 (30%), Positives = 91/207 (43%)
Query: 325 KVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSG-FQQTAEK 383
++TG+ A A+ N +C C S G A K N +G +Y E+ ++ + FQQ E
Sbjct: 6 EMTGSNMA-NALAN---ASCERCKS-GFAPAEK-IVNSNGELYHEQCFVCAQCFQQFPEG 59
Query: 384 C--AICGHLIMEMYSGFQQT-AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDG 440
G E FQ A C CG I+ +++AM S+HP CF C +C L
Sbjct: 60 LFYEFEGRKYCE--HDFQMLFAPCCHQCGEFIIGRVIKAMNNSWHPDCFCCDICQAVLAD 117
Query: 441 VPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITP-VEGTEETVRVVSMDKDFHVDCYMCE 499
V F + + C ++R K GK I E ++ + +H D + C
Sbjct: 118 VGFVKNAGRHL-CRPCHNR---EKARGLGKYICQKCHAIIEEQPLIFKNDPYHPDHFNCS 173
Query: 500 DCGLQLTDEPDKRCYPLQGRLMCRACH 526
DCG +LT D R L+G L C CH
Sbjct: 174 DCGKELT--ADAR--ELKGELYCLPCH 196
Score = 131 (51.2 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 41/167 (24%), Positives = 64/167 (38%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C A + + G LYH CF+C C + FY GR YCE D+ F
Sbjct: 21 CERCKSGFAPAEKIVNSNGELYHEQCFVCAQCFQQFPEGLFYEFEGRKYCEHDFQML-FA 79
Query: 379 QTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLIMEM-ILQAMGKSYHPGCFRC---- 431
+C I G +I M + + C IC ++ ++ ++ G+ C
Sbjct: 80 PCCHQCGEFIIGRVIKAMNNSWHPDCFCCDICQAVLADVGFVKNAGRHLCRPCHNREKAR 139
Query: 432 ----CLCNECLDGVPFTVDVDNKIYCVND-YHRMFAPKCAACGKGIT 473
+C +C + + + ND YH C+ CGK +T
Sbjct: 140 GLGKYICQKC-----HAIIEEQPLIFKNDPYHPDHF-NCSDCGKELT 180
Score = 122 (48.0 bits), Expect = 0.00013, P = 0.00013
Identities = 54/196 (27%), Positives = 79/196 (40%)
Query: 347 CC-SCGRALRG---KAFYNV-HGRVYC----EEDYLYSGFQQTAEK--CAICGHLIMEMY 395
CC CG + G KA N H +C + GF + A + C C + E
Sbjct: 81 CCHQCGEFIIGRVIKAMNNSWHPDCFCCDICQAVLADVGFVKNAGRHLCRPCHN--REKA 138
Query: 396 SGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVN 455
G + C C +I E L YHP F C C + L ++ ++YC+
Sbjct: 139 RGLGKYI--CQKCHAIIEEQPLIFKNDPYHPDHFNCSDCGKELTAD--ARELKGELYCLP 194
Query: 456 DYHRMFAPKCAACGKGITPVEGTEETVRVVS-MDKDFHVDCYMCEDCGLQLTDEPDKRCY 514
+ +M P C AC + P+EG RVV+ M K +HV+ ++C C R Y
Sbjct: 195 CHDKMGVPICGACRR---PIEG-----RVVNAMGKQWHVEHFVCAKCEKPFLGH---RHY 243
Query: 515 PLQGRLMCRACHLSHL 530
+G C H + L
Sbjct: 244 ERKGLAYCET-HYNQL 258
>UNIPROTKB|F5GYZ6 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC007529
EMBL:AC007552 HGNC:HGNC:6643 IPI:IPI01010126
ProteinModelPortal:F5GYZ6 SMR:F5GYZ6 Ensembl:ENST00000546279
ArrayExpress:F5GYZ6 Bgee:F5GYZ6 Uniprot:F5GYZ6
Length = 110
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 405 CAICGHLIMEM-ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD-NKIYCVNDYHRMFA 462
CA C I + +L+A+ K +H C +C C+ L V T+ N I C DY R+F
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 463 P--KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
CAAC K + P E +R + D +H+DC+ C+ C
Sbjct: 73 VTGNCAACSK-LIPA--FEMVMR--AKDNVYHLDCFACQLC 108
Score = 85 (35.0 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLCNE 436
CA C LI EM+++A YH CF C LCN+
Sbjct: 77 CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQ 110
Score = 84 (34.6 bits), Expect = 1.9e-09, Sum P(2) = 1.9e-09
Identities = 22/75 (29%), Positives = 28/75 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCF--ICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
C C K+ +A+ +H +C CC C G Y + C DYL
Sbjct: 13 CAGCNRKIKDR-YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL- 70
Query: 377 FQQTAEKCAICGHLI 391
F T CA C LI
Sbjct: 71 FGVTGN-CAACSKLI 84
>WB|WBGene00003000 [details] [associations]
symbol:lin-11 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0040026 "positive
regulation of vulval development" evidence=IMP] [GO:0001708 "cell
fate specification" evidence=IMP] [GO:0007413 "axonal
fasciculation" evidence=IMP] [GO:0018991 "oviposition"
evidence=IMP] [GO:0045595 "regulation of cell differentiation"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0001708 GO:GO:0018991
GO:GO:0040010 GO:GO:0045595 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0030334 Gene3D:2.10.110.10 GO:GO:0007413 GO:GO:0040026
GeneTree:ENSGT00700000104177 eggNOG:NOG257130 HOGENOM:HOG000231630
KO:K09372 EMBL:Z80221 EMBL:X54355 PIR:T27509 RefSeq:NP_492696.1
ProteinModelPortal:P20154 SMR:P20154 STRING:P20154
EnsemblMetazoa:ZC247.3 GeneID:172893 KEGG:cel:CELE_ZC247.3
UCSC:ZC247.3 CTD:172893 WormBase:ZC247.3 InParanoid:P20154
OMA:NDQQFYP NextBio:877423 Uniprot:P20154
Length = 405
Score = 167 (63.8 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 41/127 (32%), Positives = 66/127 (51%)
Query: 401 TAEKCAICGHLIMEM-ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+ +CA C I++ + +GK +H C RCC C + F+ D I C D+ R
Sbjct: 64 SGNECAACAQPILDRYVFTVLGKCWHQSCLRCCDCRAPMSMTCFSRD--GLILCKTDFSR 121
Query: 460 MFAPKCAAC-GKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
++ +CA C GK +E E+ VR + DK FH+ C+ C C +L D D+ Y ++G
Sbjct: 122 RYSQRCAGCDGK----LE-KEDLVRR-ARDKVFHIRCFQCSVCQ-RLLDTGDQ-LYIMEG 173
Query: 519 -RLMCRA 524
R +C++
Sbjct: 174 NRFVCQS 180
>RGD|1303094 [details] [associations]
symbol:Ablim2 "actin binding LIM protein family, member 2"
species:10116 "Rattus norvegicus" [GO:0003779 "actin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0015629 "actin cytoskeleton" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] Pfam:PF00412
InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132 SMART:SM00153
RGD:1303094 GO:GO:0005737 GO:GO:0007010 GO:GO:0046872 GO:GO:0008270
eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 GeneTree:ENSGT00700000104021
HOGENOM:HOG000285997 CTD:84448 EMBL:AJ703892 EMBL:AJ703893
IPI:IPI00421834 IPI:IPI00480816 RefSeq:NP_001001514.1
RefSeq:NP_001171166.1 UniGene:Rn.131797 ProteinModelPortal:Q6KC51
SMR:Q6KC51 STRING:Q6KC51 PRIDE:Q6KC51 Ensembl:ENSRNOT00000010482
GeneID:360958 KEGG:rno:360958 NextBio:674717 ArrayExpress:Q6KC51
Genevestigator:Q6KC51 GermOnline:ENSRNOG00000007882 Uniprot:Q6KC51
Length = 612
Score = 170 (64.9 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 56/191 (29%), Positives = 83/191 (43%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G +KC+
Sbjct: 92 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKDCMCQKCS--PP 137
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
++ + Q C CG I L A+ K +H GCF+C C + L+ + D
Sbjct: 138 TLVGNSAHVAQGLRSCGGCGLEIKNGQALVALDKHWHLGCFKCKTCGKLLNAE--YISKD 195
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCYMCEDCGLQLTD 507
YC DYH F +C C K IT G RV+ +K +H C +C CG Q+
Sbjct: 196 GLPYCEADYHTKFGIRCDGCEKYIT---G-----RVLEAGEKHYHPSCALCVRCG-QMFS 246
Query: 508 EPDKRCYPLQG 518
E ++ Y LQG
Sbjct: 247 EGEEM-Y-LQG 255
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 45/182 (24%), Positives = 71/182 (39%)
Query: 342 TNCFICCSCGRALRGKAF--YNVHGRVYCEE------DYLYSGF-QQTAEKCAICGHLIM 392
+ +C +CG +G+ N H + C D GF + E IC
Sbjct: 19 STAILCNTCGNVCKGEVLRVQNKHFHIRCFVCKACGCDLAEGGFFVRQGEH--ICTRDYQ 76
Query: 393 EMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFT-VDVDNK- 450
+Y +C C I ++ A+GK+YHP CF C +C L P V + K
Sbjct: 77 RLYG------TRCFSCDCFIEGEVVSALGKTYHPDCFVCAVCR--LPFPPGDRVTFNGKD 128
Query: 451 IYCVNDYHRMFAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLT 506
C A +G+ G ++ +V++DK +H+ C+ C+ CG L
Sbjct: 129 CMCQKCSPPTLVGNSAHVAQGLRSCGGCGLEIKNGQALVALDKHWHLGCFKCKTCGKLLN 188
Query: 507 DE 508
E
Sbjct: 189 AE 190
>UNIPROTKB|Q6KC51 [details] [associations]
symbol:Ablim2 "Actin-binding LIM protein 2" species:10116
"Rattus norvegicus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 RGD:1303094
GO:GO:0005737 GO:GO:0007010 GO:GO:0046872 GO:GO:0008270
eggNOG:NOG302299 HOVERGEN:HBG031499 KO:K07520 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 GeneTree:ENSGT00700000104021
HOGENOM:HOG000285997 CTD:84448 EMBL:AJ703892 EMBL:AJ703893
IPI:IPI00421834 IPI:IPI00480816 RefSeq:NP_001001514.1
RefSeq:NP_001171166.1 UniGene:Rn.131797 ProteinModelPortal:Q6KC51
SMR:Q6KC51 STRING:Q6KC51 PRIDE:Q6KC51 Ensembl:ENSRNOT00000010482
GeneID:360958 KEGG:rno:360958 NextBio:674717 ArrayExpress:Q6KC51
Genevestigator:Q6KC51 GermOnline:ENSRNOG00000007882 Uniprot:Q6KC51
Length = 612
Score = 170 (64.9 bits), Expect = 1.9e-09, P = 1.9e-09
Identities = 56/191 (29%), Positives = 83/191 (43%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G +KC+
Sbjct: 92 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKDCMCQKCS--PP 137
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
++ + Q C CG I L A+ K +H GCF+C C + L+ + D
Sbjct: 138 TLVGNSAHVAQGLRSCGGCGLEIKNGQALVALDKHWHLGCFKCKTCGKLLNAE--YISKD 195
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCYMCEDCGLQLTD 507
YC DYH F +C C K IT G RV+ +K +H C +C CG Q+
Sbjct: 196 GLPYCEADYHTKFGIRCDGCEKYIT---G-----RVLEAGEKHYHPSCALCVRCG-QMFS 246
Query: 508 EPDKRCYPLQG 518
E ++ Y LQG
Sbjct: 247 EGEEM-Y-LQG 255
Score = 122 (48.0 bits), Expect = 0.00035, P = 0.00035
Identities = 45/182 (24%), Positives = 71/182 (39%)
Query: 342 TNCFICCSCGRALRGKAF--YNVHGRVYCEE------DYLYSGF-QQTAEKCAICGHLIM 392
+ +C +CG +G+ N H + C D GF + E IC
Sbjct: 19 STAILCNTCGNVCKGEVLRVQNKHFHIRCFVCKACGCDLAEGGFFVRQGEH--ICTRDYQ 76
Query: 393 EMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFT-VDVDNK- 450
+Y +C C I ++ A+GK+YHP CF C +C L P V + K
Sbjct: 77 RLYG------TRCFSCDCFIEGEVVSALGKTYHPDCFVCAVCR--LPFPPGDRVTFNGKD 128
Query: 451 IYCVNDYHRMFAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLT 506
C A +G+ G ++ +V++DK +H+ C+ C+ CG L
Sbjct: 129 CMCQKCSPPTLVGNSAHVAQGLRSCGGCGLEIKNGQALVALDKHWHLGCFKCKTCGKLLN 188
Query: 507 DE 508
E
Sbjct: 189 AE 190
>UNIPROTKB|E2QXW5 [details] [associations]
symbol:FHL3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 OMA:QFTSRDD EMBL:AAEX03009589
EMBL:AAEX03009588 Ensembl:ENSCAFT00000005165 Uniprot:E2QXW5
Length = 290
Score = 163 (62.4 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 54/219 (24%), Positives = 88/219 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFI------CCSCGRALR-GKAFYNVHGRVYCEED 371
C C + CQ L +C+ C +CG + G G+ + E
Sbjct: 78 CCRCQRSLADEPFTCQD-SELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQTWHEHC 136
Query: 372 YLYSGFQQTAEKCAIC----GHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPG 427
+L SG +Q + H + Y + A +CA C + + + + +H
Sbjct: 137 FLCSGCEQPLGSRSFVPDKGAHYCVPCYEN--KFAPRCARCSKTLTQGGVTYRDQPWHRE 194
Query: 428 CFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM 487
C C C L G FT D+ YCV + +FAPKC++C + IT + G + VS
Sbjct: 195 CLVCTGCQTPLAGQQFT-SRDDDPYCVACFGELFAPKCSSCKRPITGLGGG----KYVSF 249
Query: 488 -DKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRAC 525
D+ +H C+ C C L + P +++C+ C
Sbjct: 250 EDRHWHHSCFSCARCSTSLVGQG---FVPDGDQVVCQGC 285
Score = 160 (61.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 38/132 (28%), Positives = 63/132 (47%)
Query: 396 SGFQQTAEKCA-ICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCV 454
S F T +C + GH E+ + + +H GCFRCC C L PFT D+++ C
Sbjct: 44 STFANTCAECQQLIGHDSRELFYE--DRHFHEGCFRCCRCQRSLADEPFTCQ-DSELLCN 100
Query: 455 NDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCY 514
+ Y F+ +C+ACG+ + P G+ ++ + +H C++C C L +
Sbjct: 101 DCYCSAFSSQCSACGETVMP--GSR---KLEYGGQTWHEHCFLCSGCEQPLGS---RSFV 152
Query: 515 PLQGRLMCRACH 526
P +G C C+
Sbjct: 153 PDKGAHYCVPCY 164
Score = 123 (48.4 bits), Expect = 7.5e-05, P = 7.5e-05
Identities = 34/103 (33%), Positives = 46/103 (44%)
Query: 429 FRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMD 488
F C C+E L G + + D+ YCV Y FA CA C + I G ++ + D
Sbjct: 15 FDCAKCSESLYGRKY-IQTDDGPYCVPCYDSTFANTCAECQQLI----G-HDSRELFYED 68
Query: 489 KDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLSHLS 531
+ FH C+ C C L DEP C L+C C+ S S
Sbjct: 69 RHFHEGCFRCCRCQRSLADEPFT-CQ--DSELLCNDCYCSAFS 108
>UNIPROTKB|Q2KIA3 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:BC112712 IPI:IPI00722914 RefSeq:NP_001039802.1
UniGene:Bt.97510 ProteinModelPortal:Q2KIA3 SMR:Q2KIA3
Ensembl:ENSBTAT00000043044 GeneID:532870 KEGG:bta:532870 CTD:55885
eggNOG:NOG316748 HOGENOM:HOG000232175 HOVERGEN:HBG054231
InParanoid:Q2KIA3 OMA:HTEIGIY OrthoDB:EOG405S2K NextBio:20875832
Uniprot:Q2KIA3
Length = 145
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 405 CAICGHLIMEM-ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD-NKIYCVNDYHRMFA 462
CA C I + +L+A+ K +H C +C C+ L V T+ N I C DY R+F
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 463 P--KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
CAAC K + P E +R + D +H+DC+ C+ C
Sbjct: 73 VTGNCAACSK-LIPA--FEMVMR--AKDNVYHLDCFACQLC 108
Score = 101 (40.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLCNE--CLDGVPFTVDVDNKIYCVNDY 457
CA C LI EM+++A YH CF C LCN+ C+ G F + +N I C DY
Sbjct: 77 CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCV-GDKFFLK-NNMILCQTDY 131
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 22/75 (29%), Positives = 28/75 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCF--ICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
C C K+ +A+ +H +C CC C G Y + C DYL
Sbjct: 13 CAGCNRKIKDR-YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL- 70
Query: 377 FQQTAEKCAICGHLI 391
F T CA C LI
Sbjct: 71 FGVTGN-CAACSKLI 84
>UNIPROTKB|J9P4K0 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 EMBL:AAEX03015233
GeneID:486662 KEGG:cfa:486662 RefSeq:XP_866536.1
ProteinModelPortal:J9P4K0 Ensembl:ENSCAFT00000048736 Uniprot:J9P4K0
Length = 145
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 405 CAICGHLIMEM-ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD-NKIYCVNDYHRMFA 462
CA C I + +L+A+ K +H C +C C+ L V T+ N I C DY R+F
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 463 P--KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
CAAC K + P E +R + D +H+DC+ C+ C
Sbjct: 73 VTGNCAACSK-LIPA--FEMVMR--AKDNVYHLDCFACQLC 108
Score = 101 (40.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLCNE--CLDGVPFTVDVDNKIYCVNDY 457
CA C LI EM+++A YH CF C LCN+ C+ G F + +N I C DY
Sbjct: 77 CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCV-GDKFFLK-NNMILCQTDY 131
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 22/75 (29%), Positives = 28/75 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCF--ICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
C C K+ +A+ +H +C CC C G Y + C DYL
Sbjct: 13 CAGCNRKIKDR-YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL- 70
Query: 377 FQQTAEKCAICGHLI 391
F T CA C LI
Sbjct: 71 FGVTGN-CAACSKLI 84
>UNIPROTKB|Q8TAP4 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 EMBL:CH471094 CTD:55885
eggNOG:NOG316748 HOGENOM:HOG000232175 HOVERGEN:HBG054231
OMA:HTEIGIY OrthoDB:EOG405S2K EMBL:AB044745 EMBL:AB044746
EMBL:AK095595 EMBL:AK294909 EMBL:AC007529 EMBL:AC007552
EMBL:BC026311 EMBL:BC050085 IPI:IPI00744307 RefSeq:NP_001001395.1
RefSeq:NP_001230538.1 RefSeq:NP_001230539.1 RefSeq:NP_001230540.1
RefSeq:NP_001230542.1 RefSeq:NP_061110.2 UniGene:Hs.504908
ProteinModelPortal:Q8TAP4 SMR:Q8TAP4 IntAct:Q8TAP4
MINT:MINT-2874669 STRING:Q8TAP4 PhosphoSite:Q8TAP4 DMDM:34098603
PRIDE:Q8TAP4 DNASU:55885 Ensembl:ENST00000261169
Ensembl:ENST00000320122 Ensembl:ENST00000354662
Ensembl:ENST00000441439 Ensembl:ENST00000447609
Ensembl:ENST00000534946 Ensembl:ENST00000535535
Ensembl:ENST00000537304 Ensembl:ENST00000540445
Ensembl:ENST00000540848 Ensembl:ENST00000541846 GeneID:55885
KEGG:hsa:55885 UCSC:uc001rdk.2 GeneCards:GC12M016701 HGNC:HGNC:6643
MIM:180386 neXtProt:NX_Q8TAP4 PharmGKB:PA30409 InParanoid:Q8TAP4
PhylomeDB:Q8TAP4 GenomeRNAi:55885 NextBio:61212 ArrayExpress:Q8TAP4
Bgee:Q8TAP4 CleanEx:HS_LMO3 Genevestigator:Q8TAP4
GermOnline:ENSG00000048540 Uniprot:Q8TAP4
Length = 145
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 405 CAICGHLIMEM-ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD-NKIYCVNDYHRMFA 462
CA C I + +L+A+ K +H C +C C+ L V T+ N I C DY R+F
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 463 P--KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
CAAC K + P E +R + D +H+DC+ C+ C
Sbjct: 73 VTGNCAACSK-LIPA--FEMVMR--AKDNVYHLDCFACQLC 108
Score = 101 (40.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLCNE--CLDGVPFTVDVDNKIYCVNDY 457
CA C LI EM+++A YH CF C LCN+ C+ G F + +N I C DY
Sbjct: 77 CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCV-GDKFFLK-NNMILCQTDY 131
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 22/75 (29%), Positives = 28/75 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCF--ICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
C C K+ +A+ +H +C CC C G Y + C DYL
Sbjct: 13 CAGCNRKIKDR-YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL- 70
Query: 377 FQQTAEKCAICGHLI 391
F T CA C LI
Sbjct: 71 FGVTGN-CAACSKLI 84
>UNIPROTKB|A9ED84 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 CTD:55885 HOVERGEN:HBG054231
OMA:HTEIGIY OrthoDB:EOG405S2K EMBL:CU915363 EMBL:AB304400
RefSeq:NP_001106155.1 UniGene:Ssc.8086 SMR:A9ED84
Ensembl:ENSSSCT00000000642 GeneID:100127154 KEGG:ssc:100127154
eggNOG:NOG315878 Uniprot:A9ED84
Length = 145
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 405 CAICGHLIMEM-ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD-NKIYCVNDYHRMFA 462
CA C I + +L+A+ K +H C +C C+ L V T+ N I C DY R+F
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 463 P--KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
CAAC K + P E +R + D +H+DC+ C+ C
Sbjct: 73 VTGNCAACSK-LIPA--FEMVMR--AKDNVYHLDCFACQLC 108
Score = 101 (40.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLCNE--CLDGVPFTVDVDNKIYCVNDY 457
CA C LI EM+++A YH CF C LCN+ C+ G F + +N I C DY
Sbjct: 77 CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCV-GDKFFLK-NNMILCQTDY 131
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 22/75 (29%), Positives = 28/75 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCF--ICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
C C K+ +A+ +H +C CC C G Y + C DYL
Sbjct: 13 CAGCNRKIKDR-YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL- 70
Query: 377 FQQTAEKCAICGHLI 391
F T CA C LI
Sbjct: 71 FGVTGN-CAACSKLI 84
>MGI|MGI:102810 [details] [associations]
symbol:Lmo3 "LIM domain only 3" species:10090 "Mus musculus"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
MGI:MGI:102810 GO:GO:0006355 GO:GO:0046872 GO:GO:0008270
GO:GO:0006351 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
CTD:55885 eggNOG:NOG316748 HOVERGEN:HBG054231 OrthoDB:EOG405S2K
EMBL:AK034177 EMBL:BC057086 IPI:IPI00406211 RefSeq:NP_997105.1
UniGene:Mm.490545 ProteinModelPortal:Q8BZL8 SMR:Q8BZL8
STRING:Q8BZL8 PhosphoSite:Q8BZL8 PRIDE:Q8BZL8
Ensembl:ENSMUST00000161450 Ensembl:ENSMUST00000162772
Ensembl:ENSMUST00000163024 GeneID:109593 KEGG:mmu:109593
UCSC:uc009enl.1 InParanoid:Q8BZL8 NextBio:362405 Bgee:Q8BZL8
CleanEx:MM_LMO3 Genevestigator:Q8BZL8 GermOnline:ENSMUSG00000030226
Uniprot:Q8BZL8
Length = 145
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 405 CAICGHLIMEM-ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD-NKIYCVNDYHRMFA 462
CA C I + +L+A+ K +H C +C C+ L V T+ N I C DY R+F
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 463 P--KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
CAAC K + P E +R + D +H+DC+ C+ C
Sbjct: 73 VTGNCAACSK-LIPA--FEMVMR--AKDNVYHLDCFACQLC 108
Score = 101 (40.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLCNE--CLDGVPFTVDVDNKIYCVNDY 457
CA C LI EM+++A YH CF C LCN+ C+ G F + +N I C DY
Sbjct: 77 CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCV-GDKFFLK-NNMILCQTDY 131
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 22/75 (29%), Positives = 28/75 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCF--ICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
C C K+ +A+ +H +C CC C G Y + C DYL
Sbjct: 13 CAGCNRKIKDR-YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL- 70
Query: 377 FQQTAEKCAICGHLI 391
F T CA C LI
Sbjct: 71 FGVTGN-CAACSKLI 84
>RGD|1561357 [details] [associations]
symbol:RGD1561357 "similar to LIM domain only 3" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 RGD:1561357 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 OMA:HTEIGIY IPI:IPI00480651
RefSeq:XP_003749911.1 ProteinModelPortal:F2Z3R1 SMR:F2Z3R1
Ensembl:ENSRNOT00000010623 GeneID:497798 KEGG:rno:497798 CTD:497798
Uniprot:F2Z3R1
Length = 145
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 405 CAICGHLIMEM-ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD-NKIYCVNDYHRMFA 462
CA C I + +L+A+ K +H C +C C+ L V T+ N I C DY R+F
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 463 P--KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
CAAC K + P E +R + D +H+DC+ C+ C
Sbjct: 73 VTGNCAACSK-LIPA--FEMVMR--AKDNVYHLDCFACQLC 108
Score = 101 (40.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLCNE--CLDGVPFTVDVDNKIYCVNDY 457
CA C LI EM+++A YH CF C LCN+ C+ G F + +N I C DY
Sbjct: 77 CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCV-GDKFFLK-NNMILCQTDY 131
Score = 84 (34.6 bits), Expect = 2.1e-09, Sum P(2) = 2.1e-09
Identities = 22/75 (29%), Positives = 28/75 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCF--ICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
C C K+ +A+ +H +C CC C G Y + C DYL
Sbjct: 13 CAGCNRKIKDR-YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL- 70
Query: 377 FQQTAEKCAICGHLI 391
F T CA C LI
Sbjct: 71 FGVTGN-CAACSKLI 84
>ZFIN|ZDB-GENE-031219-1 [details] [associations]
symbol:fhl1b "four and a half LIM domains 1b"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-031219-1 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HSSP:Q05158 HOVERGEN:HBG074526 KO:K14365
EMBL:BC053279 IPI:IPI00481621 RefSeq:NP_954687.1 UniGene:Dr.84449
ProteinModelPortal:Q7T327 SMR:Q7T327 GeneID:387528 KEGG:dre:387528
CTD:387528 InParanoid:Q7T327 NextBio:20814152 ArrayExpress:Q7T327
Uniprot:Q7T327
Length = 280
Score = 162 (62.1 bits), Expect = 2.2e-09, P = 2.2e-09
Identities = 39/125 (31%), Positives = 57/125 (45%)
Query: 402 AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
A++CA C I + + +H CF C C + L G FT + K+YCV+ Y
Sbjct: 159 AKQCACCKKPITTGGVNYQDQPWHSECFVCSSCRKPLAGTRFTSH-EEKVYCVDCYKSTV 217
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDK-DFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
A KC+ C P+ G + VV+ + +H C+ C+ C L L D KR G +
Sbjct: 218 AKKCSGCQN---PITGFGKATNVVNYEGGSWHDYCFNCKKCSLNLAD---KRFVAHSGHI 271
Query: 521 MCRAC 525
C C
Sbjct: 272 YCSDC 276
Score = 144 (55.7 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 48/162 (29%), Positives = 63/162 (38%)
Query: 367 YCEEDYLYSGFQQTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIM--EMILQAMGKSY 424
YC ED F + EK +C + + F A C C I L GK +
Sbjct: 9 YCREDLSGKKFVRKDEK-QVC----VRCFDKF--CANTCTECRRTISTDSKELHHKGKYW 61
Query: 425 HPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRV 484
H CFRC C + L FT D++I C R AP+C C K I P GTE V
Sbjct: 62 HSDCFRCAKCYKNLAKESFT-SKDDRILCGTCSSREDAPRCHGCYKPILP--GTEN---V 115
Query: 485 VSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACH 526
+H +C+ C C + + K + C CH
Sbjct: 116 EYKGNSWHDECFKCYQCQKPIGN---KSFITKNNNVYCSPCH 154
>UNIPROTKB|P37137 [details] [associations]
symbol:lhx5 "LIM/homeobox protein Lhx5" species:8355
"Xenopus laevis" [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0007275 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
HOVERGEN:HBG006263 KO:K09372 CTD:64211 EMBL:L42546 EMBL:BC084744
EMBL:Z11587 PIR:S23803 RefSeq:NP_001084038.1 UniGene:Xl.1047
ProteinModelPortal:P37137 SMR:P37137 GeneID:399270 KEGG:xla:399270
Xenbase:XB-GENE-865965 Uniprot:P37137
Length = 402
Score = 166 (63.5 bits), Expect = 2.4e-09, P = 2.4e-09
Identities = 40/134 (29%), Positives = 68/134 (50%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + K+YC D+ R F
Sbjct: 5 CAGCERPILDRFLLNVLDRAWHVKCVQCCECKCNLTEKCFSRE--GKLYCKTDFFRRFGT 62
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KCA C GI+P + VR + +K FH++C+ C C QL+ + Y + + + +C
Sbjct: 63 KCAGCSLGISP----SDLVRK-ARNKVFHLNCFTCMVCNKQLST--GEELYIIDENKFVC 115
Query: 523 RACHLSHLSRHHQS 536
+ ++S S S
Sbjct: 116 KEDYISASSLKESS 129
>ZFIN|ZDB-GENE-060728-1 [details] [associations]
symbol:lhx4 "LIM homeobox 4" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-060728-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104177
HOGENOM:HOG000231629 KO:K09374 HOVERGEN:HBG006263 CTD:89884
OMA:LSFRDDQ EMBL:BX294388 EMBL:CR381643 EMBL:CT025732
IPI:IPI00616255 RefSeq:NP_001116445.1 UniGene:Dr.92005
Ensembl:ENSDART00000057644 GeneID:571943 KEGG:dre:571943
NextBio:20890768 Uniprot:B0S5S7
Length = 391
Score = 165 (63.1 bits), Expect = 2.9e-09, P = 2.9e-09
Identities = 39/126 (30%), Positives = 65/126 (51%)
Query: 400 QTAEKCAICG-HLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
Q +CA C H++ + IL+ + + +H C +C C+ L F+ N +YC D+
Sbjct: 28 QQIPQCAGCSQHILDKFILKVLDRHWHSKCLKCADCHALLADKCFS-RAGN-VYCKEDFF 85
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQ- 517
+ F KCA+C +GI P + VR + D +H+ C+ C C QL + Y ++
Sbjct: 86 KRFGTKCASCQQGIPPTQ----VVRK-AQDFVYHLHCFACVMCSRQLATGDE--FYLMED 138
Query: 518 GRLMCR 523
GRL+C+
Sbjct: 139 GRLVCK 144
>UNIPROTKB|F8VQR7 [details] [associations]
symbol:CSRP2 "Cysteine and glycine-rich protein 2"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 HGNC:HGNC:2470 EMBL:AC124784 IPI:IPI01021914
ProteinModelPortal:F8VQR7 SMR:F8VQR7 Ensembl:ENST00000547435
ArrayExpress:F8VQR7 Bgee:F8VQR7 Uniprot:F8VQR7
Length = 187
Score = 117 (46.2 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 23/69 (33%), Positives = 35/69 (50%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC CG + +Q G+S+H CF C +C + LD + D +IYC + Y + +
Sbjct: 9 KCGACGRTVYHAEEVQCDGRSFHRCCFLCMVCRKNLDSTTVAIH-DEEIYCKSCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 110 (43.8 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
AEKC+ CG + E I+ A GK +H CFRC C + L+ T + + +IYC H
Sbjct: 116 AEKCSRCGDSVYAAEKIIGA-GKPWHKNCFRCAKCGKSLESTTLT-EKEGEIYCKGKIH 172
Score = 76 (31.8 bits), Expect = 3.2e-09, Sum P(2) = 3.2e-09
Identities = 20/78 (25%), Positives = 35/78 (44%)
Query: 462 APKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGR 519
A KC+ CG + E +++ K +H +C+ C CG L+ T +K +G
Sbjct: 116 AEKCSRCGDSVYAAE------KIIGAGKPWHKNCFRCAKCGKSLESTTLTEK-----EGE 164
Query: 520 LMCRA-CHLSHLSRHHQS 536
+ C+ H S+ + S
Sbjct: 165 IYCKGKIHFSYCCPYEYS 182
Score = 73 (30.8 bits), Expect = 6.2e-08, Sum P(2) = 6.2e-08
Identities = 17/55 (30%), Positives = 24/55 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGR-VYCEEDY 372
C CG V A + Q G +H CF+C C + L +H +YC+ Y
Sbjct: 10 CGACGRTVYHAEEV-QCDGRSFHRCCFLCMVCRKNLDSTTVA-IHDEEIYCKSCY 62
>UNIPROTKB|F1NBH3 [details] [associations]
symbol:LMO3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 OMA:HTEIGIY EMBL:AADN02006566
EMBL:AADN02006567 EMBL:AADN02006568 IPI:IPI00590236
Ensembl:ENSGALT00000009596 Uniprot:F1NBH3
Length = 147
Score = 139 (54.0 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 39/115 (33%), Positives = 57/115 (49%)
Query: 392 MEMYSGFQQTAEK-CAICGHLIMEM-ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD- 448
++M S T K CA C I + +L+A+ K +H C +C C+ L V T+
Sbjct: 1 IQMLSVQPDTKPKGCAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKA 60
Query: 449 NKIYCVNDYHRMFAP--KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
N I C DY R+F CAAC K + P E +R + D +H+DC+ C+ C
Sbjct: 61 NLILCRRDYLRLFGVTGNCAACSK-LIPA--FEMVMR--AKDNVYHLDCFACQLC 110
Score = 101 (40.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 24/57 (42%), Positives = 31/57 (54%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLCNE--CLDGVPFTVDVDNKIYCVNDY 457
CA C LI EM+++A YH CF C LCN+ C+ G F + +N I C DY
Sbjct: 79 CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQRFCV-GDKFFLK-NNMILCQTDY 133
Score = 84 (34.6 bits), Expect = 3.3e-09, Sum P(2) = 3.3e-09
Identities = 22/75 (29%), Positives = 28/75 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCF--ICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
C C K+ +A+ +H +C CC C G Y + C DYL
Sbjct: 15 CAGCNRKIKDR-YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL- 72
Query: 377 FQQTAEKCAICGHLI 391
F T CA C LI
Sbjct: 73 FGVTGN-CAACSKLI 86
>UNIPROTKB|E1BYB0 [details] [associations]
symbol:LMO4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02012827 EMBL:AADN02012828
IPI:IPI00819278 Ensembl:ENSGALT00000010105 ArrayExpress:E1BYB0
Uniprot:E1BYB0
Length = 165
Score = 144 (55.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDN-KIYCVNDYHRM 460
++CA CG I + +L AM +H C +C C L + + + I C NDY R+
Sbjct: 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL 80
Query: 461 FAPK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
F C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G
Sbjct: 81 FGNSGACSACGQSI-PA--SELVMR--AQGNVYHLKCFTCSTCRNRLV--PGDRFHYING 133
Query: 519 RLMC 522
L C
Sbjct: 134 SLFC 137
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A GN+YH CF C +C R + G F+ ++G ++CE D
Sbjct: 85 GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVND 456
C+ CG I E++++A G YH CF C C N + G F ++ ++C +D
Sbjct: 87 CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHY-INGSLFCEHD 140
Score = 84 (34.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALR--GKAFYNVHGRVYCEEDYLYSG 376
C CG K+ AM + +H+ C C C L G + Y G + C DY+
Sbjct: 23 CAGCGGKIADRF-LLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL- 80
Query: 377 FQQTAEKCAICGHLI 391
F + C+ CG I
Sbjct: 81 FGNSGA-CSACGQSI 94
>UNIPROTKB|F1P113 [details] [associations]
symbol:LMO4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IEA] [GO:0001843
"neural tube closure" evidence=IEA] [GO:0003281 "ventricular septum
development" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008134 "transcription
factor binding" evidence=IEA] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IEA] [GO:0021522 "spinal cord
motor neuron differentiation" evidence=IEA] [GO:0021527 "spinal
cord association neuron differentiation" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048538 "thymus
development" evidence=IEA] [GO:0050865 "regulation of cell
activation" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0031333 GO:GO:0008270 GO:GO:0045944 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0006366 GO:GO:0001158 GO:GO:0042659
GeneTree:ENSGT00700000104177 OMA:ALSWKRC GO:GO:0050865
EMBL:AADN02012827 EMBL:AADN02012828 IPI:IPI00582860
Ensembl:ENSGALT00000033333 ArrayExpress:F1P113 Uniprot:F1P113
Length = 174
Score = 144 (55.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDN-KIYCVNDYHRM 460
++CA CG I + +L AM +H C +C C L + + + I C NDY R+
Sbjct: 30 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL 89
Query: 461 FAPK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
F C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G
Sbjct: 90 FGNSGACSACGQSI-PA--SELVMR--AQGNVYHLKCFTCSTCRNRLV--PGDRFHYING 142
Query: 519 RLMC 522
L C
Sbjct: 143 SLFC 146
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A GN+YH CF C +C R + G F+ ++G ++CE D
Sbjct: 94 GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 149
Score = 89 (36.4 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVND 456
C+ CG I E++++A G YH CF C C N + G F ++ ++C +D
Sbjct: 96 CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHY-INGSLFCEHD 149
Score = 84 (34.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALR--GKAFYNVHGRVYCEEDYLYSG 376
C CG K+ AM + +H+ C C C L G + Y G + C DY+
Sbjct: 32 CAGCGGKIADRF-LLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL- 89
Query: 377 FQQTAEKCAICGHLI 391
F + C+ CG I
Sbjct: 90 FGNSGA-CSACGQSI 103
>UNIPROTKB|Q3SWZ8 [details] [associations]
symbol:LMO4 "LIM domain transcription factor LMO4"
species:9913 "Bos taurus" [GO:0050865 "regulation of cell
activation" evidence=IEA] [GO:0048538 "thymus development"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0042659
"regulation of cell fate specification" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0021527 "spinal cord association neuron differentiation"
evidence=IEA] [GO:0021522 "spinal cord motor neuron
differentiation" evidence=IEA] [GO:0021514 "ventral spinal cord
interneuron differentiation" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IEA]
[GO:0003281 "ventricular septum development" evidence=IEA]
[GO:0001843 "neural tube closure" evidence=IEA] [GO:0001158
"enhancer sequence-specific DNA binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0031333 GO:GO:0008270 GO:GO:0045944 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366 GO:GO:0001843
GO:GO:0048538 GO:GO:0001158 GO:GO:0021527 GO:GO:0042659
GO:GO:0003281 GO:GO:0021514 GeneTree:ENSGT00700000104177
HOGENOM:HOG000232175 HOVERGEN:HBG054231 eggNOG:NOG314117
OrthoDB:EOG4XKV82 OMA:ALSWKRC EMBL:BC104582 IPI:IPI00705980
RefSeq:NP_001029923.1 UniGene:Bt.3730 ProteinModelPortal:Q3SWZ8
SMR:Q3SWZ8 PRIDE:Q3SWZ8 Ensembl:ENSBTAT00000000389 GeneID:614212
KEGG:bta:614212 CTD:8543 InParanoid:Q3SWZ8 NextBio:20898998
GO:GO:0050865 Uniprot:Q3SWZ8
Length = 165
Score = 144 (55.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDN-KIYCVNDYHRM 460
++CA CG I + +L AM +H C +C C L + + + I C NDY R+
Sbjct: 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL 80
Query: 461 FAPK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
F C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G
Sbjct: 81 FGNSGACSACGQSI-PA--SELVMR--AQGNVYHLKCFTCSTCRNRLV--PGDRFHYING 133
Query: 519 RLMC 522
L C
Sbjct: 134 SLFC 137
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A GN+YH CF C +C R + G F+ ++G ++CE D
Sbjct: 85 GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVND 456
C+ CG I E++++A G YH CF C C N + G F ++ ++C +D
Sbjct: 87 CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHY-INGSLFCEHD 140
Score = 84 (34.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALR--GKAFYNVHGRVYCEEDYLYSG 376
C CG K+ AM + +H+ C C C L G + Y G + C DY+
Sbjct: 23 CAGCGGKIADRF-LLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL- 80
Query: 377 FQQTAEKCAICGHLI 391
F + C+ CG I
Sbjct: 81 FGNSGA-CSACGQSI 94
>UNIPROTKB|E2QSI3 [details] [associations]
symbol:LMO4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050865 "regulation of cell activation"
evidence=IEA] [GO:0048538 "thymus development" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042659 "regulation of
cell fate specification" evidence=IEA] [GO:0031333 "negative
regulation of protein complex assembly" evidence=IEA] [GO:0021527
"spinal cord association neuron differentiation" evidence=IEA]
[GO:0021522 "spinal cord motor neuron differentiation"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0003281 "ventricular septum
development" evidence=IEA] [GO:0001843 "neural tube closure"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0031333 GO:GO:0008270
GO:GO:0045944 GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0006366 GO:GO:0001843 GO:GO:0048538 GO:GO:0001158
GO:GO:0021527 GO:GO:0042659 GO:GO:0003281 GO:GO:0021514
GeneTree:ENSGT00700000104177 OMA:ALSWKRC CTD:8543 GO:GO:0050865
EMBL:AAEX03004843 EMBL:AAEX03004844 RefSeq:XP_003434840.1
RefSeq:XP_537086.1 RefSeq:XP_867313.1 SMR:E2QSI3
Ensembl:ENSCAFT00000036423 GeneID:479962 KEGG:cfa:479962
NextBio:20855066 Uniprot:E2QSI3
Length = 165
Score = 144 (55.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDN-KIYCVNDYHRM 460
++CA CG I + +L AM +H C +C C L + + + I C NDY R+
Sbjct: 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL 80
Query: 461 FAPK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
F C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G
Sbjct: 81 FGNSGACSACGQSI-PA--SELVMR--AQGNVYHLKCFTCSTCRNRLV--PGDRFHYING 133
Query: 519 RLMC 522
L C
Sbjct: 134 SLFC 137
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A GN+YH CF C +C R + G F+ ++G ++CE D
Sbjct: 85 GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVND 456
C+ CG I E++++A G YH CF C C N + G F ++ ++C +D
Sbjct: 87 CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHY-INGSLFCEHD 140
Score = 84 (34.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALR--GKAFYNVHGRVYCEEDYLYSG 376
C CG K+ AM + +H+ C C C L G + Y G + C DY+
Sbjct: 23 CAGCGGKIADRF-LLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL- 80
Query: 377 FQQTAEKCAICGHLI 391
F + C+ CG I
Sbjct: 81 FGNSGA-CSACGQSI 94
>UNIPROTKB|P61968 [details] [associations]
symbol:LMO4 "LIM domain transcription factor LMO4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA] [GO:0003281 "ventricular septum development"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IEA] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0042659 "regulation of cell fate specification" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048538 "thymus
development" evidence=IEA] [GO:0050865 "regulation of cell
activation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=ISS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0001843 "neural tube closure" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0031333 GO:GO:0008270
GO:GO:0045944 Pathway_Interaction_DB:il6_7pathway GO:GO:0003700
EMBL:CH471097 GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522
GO:GO:0006366 GO:GO:0001843 GO:GO:0048538 GO:GO:0008134
GO:GO:0001158 GO:GO:0021527 GO:GO:0042659 GO:GO:0003281 PDB:2L4Z
PDBsum:2L4Z GO:GO:0021514 HOGENOM:HOG000232175 HOVERGEN:HBG054231
eggNOG:NOG314117 OrthoDB:EOG4XKV82 OMA:ALSWKRC CTD:8543
GO:GO:0050865 EMBL:U24576 EMBL:BC003600 EMBL:BC017673 EMBL:BC065818
IPI:IPI00297604 RefSeq:NP_006760.1 UniGene:Hs.436792
ProteinModelPortal:P61968 SMR:P61968 IntAct:P61968 MINT:MINT-265427
STRING:P61968 DMDM:48428992 PRIDE:P61968 Ensembl:ENST00000370542
Ensembl:ENST00000370544 GeneID:8543 KEGG:hsa:8543 UCSC:uc001dmi.3
GeneCards:GC01P087794 HGNC:HGNC:6644 HPA:CAB022345 MIM:603129
neXtProt:NX_P61968 PharmGKB:PA30410 InParanoid:P61968
PhylomeDB:P61968 ChiTaRS:LMO4 EvolutionaryTrace:P61968
GenomeRNAi:8543 NextBio:32002 Bgee:P61968 CleanEx:HS_LMO4
Genevestigator:P61968 GermOnline:ENSG00000143013 Uniprot:P61968
Length = 165
Score = 144 (55.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDN-KIYCVNDYHRM 460
++CA CG I + +L AM +H C +C C L + + + I C NDY R+
Sbjct: 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL 80
Query: 461 FAPK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
F C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G
Sbjct: 81 FGNSGACSACGQSI-PA--SELVMR--AQGNVYHLKCFTCSTCRNRLV--PGDRFHYING 133
Query: 519 RLMC 522
L C
Sbjct: 134 SLFC 137
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A GN+YH CF C +C R + G F+ ++G ++CE D
Sbjct: 85 GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVND 456
C+ CG I E++++A G YH CF C C N + G F ++ ++C +D
Sbjct: 87 CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHY-INGSLFCEHD 140
Score = 84 (34.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALR--GKAFYNVHGRVYCEEDYLYSG 376
C CG K+ AM + +H+ C C C L G + Y G + C DY+
Sbjct: 23 CAGCGGKIADRF-LLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL- 80
Query: 377 FQQTAEKCAICGHLI 391
F + C+ CG I
Sbjct: 81 FGNSGA-CSACGQSI 94
>UNIPROTKB|A9ED91 [details] [associations]
symbol:LMO4 "LIM domain only 4" species:9823 "Sus scrofa"
[GO:0050865 "regulation of cell activation" evidence=IEA]
[GO:0048538 "thymus development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0042659 "regulation of cell fate
specification" evidence=IEA] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IEA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA] [GO:0021522
"spinal cord motor neuron differentiation" evidence=IEA]
[GO:0021514 "ventral spinal cord interneuron differentiation"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003281 "ventricular septum development"
evidence=IEA] [GO:0001843 "neural tube closure" evidence=IEA]
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0031333 GO:GO:0008270 GO:GO:0045944
GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366
GO:GO:0001843 GO:GO:0048538 GO:GO:0001158 GO:GO:0021527
GO:GO:0042659 GO:GO:0003281 GO:GO:0021514
GeneTree:ENSGT00700000104177 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 OrthoDB:EOG4XKV82 OMA:ALSWKRC
CTD:8543 GO:GO:0050865 EMBL:CU550656 EMBL:AB304401
RefSeq:NP_001106156.1 UniGene:Ssc.9714 ProteinModelPortal:A9ED91
SMR:A9ED91 STRING:A9ED91 PRIDE:A9ED91 Ensembl:ENSSSCT00000007590
GeneID:100127155 KEGG:ssc:100127155 Uniprot:A9ED91
Length = 165
Score = 144 (55.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDN-KIYCVNDYHRM 460
++CA CG I + +L AM +H C +C C L + + + I C NDY R+
Sbjct: 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL 80
Query: 461 FAPK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
F C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G
Sbjct: 81 FGNSGACSACGQSI-PA--SELVMR--AQGNVYHLKCFTCSTCRNRLV--PGDRFHYING 133
Query: 519 RLMC 522
L C
Sbjct: 134 SLFC 137
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A GN+YH CF C +C R + G F+ ++G ++CE D
Sbjct: 85 GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVND 456
C+ CG I E++++A G YH CF C C N + G F ++ ++C +D
Sbjct: 87 CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHY-INGSLFCEHD 140
Score = 84 (34.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALR--GKAFYNVHGRVYCEEDYLYSG 376
C CG K+ AM + +H+ C C C L G + Y G + C DY+
Sbjct: 23 CAGCGGKIADRF-LLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL- 80
Query: 377 FQQTAEKCAICGHLI 391
F + C+ CG I
Sbjct: 81 FGNSGA-CSACGQSI 94
>MGI|MGI:109360 [details] [associations]
symbol:Lmo4 "LIM domain only 4" species:10090 "Mus musculus"
[GO:0001158 "enhancer sequence-specific DNA binding" evidence=IDA]
[GO:0001843 "neural tube closure" evidence=IMP] [GO:0003281
"ventricular septum development" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005667 "transcription factor complex"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0008134 "transcription
factor binding" evidence=IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IDA] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IDA] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IGI] [GO:0031333
"negative regulation of protein complex assembly" evidence=IDA]
[GO:0042659 "regulation of cell fate specification" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048538 "thymus development"
evidence=IGI] [GO:0050865 "regulation of cell activation"
evidence=IMP] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 MGI:MGI:109360 GO:GO:0046872
GO:GO:0031333 GO:GO:0008270 GO:GO:0045944 GO:GO:0005667
Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366 GO:GO:0001843
GO:GO:0048538 GO:GO:0008134 GO:GO:0001158 GO:GO:0021527
GO:GO:0042659 GO:GO:0003281 GO:GO:0021514 PDB:1M3V PDB:1RUT
PDBsum:1M3V PDBsum:1RUT HOGENOM:HOG000232175 HOVERGEN:HBG054231
eggNOG:NOG314117 OrthoDB:EOG4XKV82 OMA:ALSWKRC CTD:8543
GO:GO:0050865 ChiTaRS:LMO4 EMBL:AF074600 EMBL:AF102817
EMBL:AF096996 EMBL:BC003488 EMBL:BC004661 EMBL:BC010278
IPI:IPI00281974 RefSeq:NP_001155241.1 RefSeq:NP_001155242.1
RefSeq:NP_034853.1 UniGene:Mm.29187 PDB:2DFY PDBsum:2DFY
ProteinModelPortal:P61969 SMR:P61969 STRING:P61969 PRIDE:P61969
Ensembl:ENSMUST00000120539 Ensembl:ENSMUST00000121112
Ensembl:ENSMUST00000121796 GeneID:16911 KEGG:mmu:16911
InParanoid:P61969 EvolutionaryTrace:P61969 NextBio:290952
Bgee:P61969 CleanEx:MM_LMO4 Genevestigator:P61969 Uniprot:P61969
Length = 165
Score = 144 (55.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDN-KIYCVNDYHRM 460
++CA CG I + +L AM +H C +C C L + + + I C NDY R+
Sbjct: 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL 80
Query: 461 FAPK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
F C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G
Sbjct: 81 FGNSGACSACGQSI-PA--SELVMR--AQGNVYHLKCFTCSTCRNRLV--PGDRFHYING 133
Query: 519 RLMC 522
L C
Sbjct: 134 SLFC 137
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A GN+YH CF C +C R + G F+ ++G ++CE D
Sbjct: 85 GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVND 456
C+ CG I E++++A G YH CF C C N + G F ++ ++C +D
Sbjct: 87 CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHY-INGSLFCEHD 140
Score = 84 (34.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALR--GKAFYNVHGRVYCEEDYLYSG 376
C CG K+ AM + +H+ C C C L G + Y G + C DY+
Sbjct: 23 CAGCGGKIADRF-LLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL- 80
Query: 377 FQQTAEKCAICGHLI 391
F + C+ CG I
Sbjct: 81 FGNSGA-CSACGQSI 94
>RGD|1305670 [details] [associations]
symbol:Lmo4 "LIM domain only 4" species:10116 "Rattus
norvegicus" [GO:0001158 "enhancer sequence-specific DNA binding"
evidence=IEA;ISO] [GO:0001843 "neural tube closure"
evidence=IEA;ISO] [GO:0003281 "ventricular septum development"
evidence=IEA;ISO] [GO:0005667 "transcription factor complex"
evidence=IEA;ISO] [GO:0006366 "transcription from RNA polymerase II
promoter" evidence=IEA;ISO] [GO:0008134 "transcription factor
binding" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021514 "ventral spinal cord interneuron
differentiation" evidence=IEA;ISO] [GO:0021522 "spinal cord motor
neuron differentiation" evidence=IEA;ISO] [GO:0021527 "spinal cord
association neuron differentiation" evidence=IEA;ISO] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0042659 "regulation of cell fate specification"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048538
"thymus development" evidence=IEA;ISO] [GO:0050865 "regulation of
cell activation" evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 RGD:1305670
GO:GO:0046872 GO:GO:0031333 GO:GO:0008270 GO:GO:0045944
GO:GO:0005667 Gene3D:2.10.110.10 GO:GO:0021522 GO:GO:0006366
GO:GO:0001843 GO:GO:0048538 GO:GO:0001158 GO:GO:0021527
GO:GO:0042659 EMBL:CH473952 GO:GO:0003281 GO:GO:0021514
GeneTree:ENSGT00700000104177 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 OrthoDB:EOG4XKV82 CTD:8543
GO:GO:0050865 EMBL:BC087700 IPI:IPI00202852 RefSeq:NP_001009708.1
UniGene:Rn.2517 SMR:Q5PPG8 STRING:Q5PPG8 Ensembl:ENSRNOT00000067502
GeneID:362051 KEGG:rno:362051 UCSC:RGD:1305670 InParanoid:Q5PPG8
NextBio:678516 Genevestigator:Q5PPG8 Uniprot:Q5PPG8
Length = 165
Score = 144 (55.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDN-KIYCVNDYHRM 460
++CA CG I + +L AM +H C +C C L + + + I C NDY R+
Sbjct: 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL 80
Query: 461 FAPK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
F C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G
Sbjct: 81 FGNSGACSACGQSI-PA--SELVMR--AQGNVYHLKCFTCSTCRNRLV--PGDRFHYING 133
Query: 519 RLMC 522
L C
Sbjct: 134 SLFC 137
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A GN+YH CF C +C R + G F+ ++G ++CE D
Sbjct: 85 GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVND 456
C+ CG I E++++A G YH CF C C N + G F ++ ++C +D
Sbjct: 87 CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHY-INGSLFCEHD 140
Score = 84 (34.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALR--GKAFYNVHGRVYCEEDYLYSG 376
C CG K+ AM + +H+ C C C L G + Y G + C DY+
Sbjct: 23 CAGCGGKIADRF-LLYAMDSYWHSRCLKCSCCQAQLGDIGTSCYTKSGMILCRNDYIRL- 80
Query: 377 FQQTAEKCAICGHLI 391
F + C+ CG I
Sbjct: 81 FGNSGA-CSACGQSI 94
>UNIPROTKB|C9JJK5 [details] [associations]
symbol:ZYX "Zyxin" species:9606 "Homo sapiens" [GO:0008270
"zinc ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC092214 HGNC:HGNC:13200
ChiTaRS:ZYX IPI:IPI00658086 ProteinModelPortal:C9JJK5 SMR:C9JJK5
STRING:C9JJK5 PRIDE:C9JJK5 Ensembl:ENST00000446634
ArrayExpress:C9JJK5 Bgee:C9JJK5 Uniprot:C9JJK5
Length = 171
Score = 144 (55.7 bits), Expect = 3.3e-09, P = 3.3e-09
Identities = 28/76 (36%), Positives = 40/76 (52%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + + A A +A+G L+H CF C C + L+G+ FY++ G YCE Y
Sbjct: 73 LCGRCHQPLARAQPAVRALGQLFHIACFTCHQCAQQLQGQQFYSLEGAPYCEGCYT---- 128
Query: 378 QQTAEKCAICGHLIME 393
T EKC CG I +
Sbjct: 129 -DTLEKCNTCGEPITD 143
Score = 118 (46.6 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 20/43 (46%), Positives = 27/43 (62%)
Query: 398 FQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDG 440
+ T EKC CG I + +L+A GK+YHP CF C +C L+G
Sbjct: 127 YTDTLEKCNTCGEPITDRMLRATGKAYHPHCFTCVVCARPLEG 169
>ZFIN|ZDB-GENE-040206-1 [details] [associations]
symbol:fhl1a "four and a half LIM domains 1a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 ZFIN:ZDB-GENE-040206-1 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GeneTree:ENSGT00690000101670 EMBL:BX511227
IPI:IPI00497720 Ensembl:ENSDART00000131056 Bgee:F1QYK5
Uniprot:F1QYK5
Length = 340
Score = 146 (56.5 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 39/126 (30%), Positives = 55/126 (43%)
Query: 402 AEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMF 461
A+ C C I L + +H CF C C + L G FT D + YCV+ Y
Sbjct: 219 AKHCVRCKEAITSGGLTYQDQPWHSECFVCHTCKKPLAGARFTAHED-QFYCVDCYKSDV 277
Query: 462 APKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR- 519
A KC+ C P+ G VV+ DK +H C+ C+ C L + KR + + G
Sbjct: 278 AKKCSGCQN---PITGFGRGTNVVNYEDKSWHEYCFNCKKCSLSMAH---KR-FVINGED 330
Query: 520 LMCRAC 525
+ C C
Sbjct: 331 IYCSDC 336
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 41/135 (30%), Positives = 57/135 (42%)
Query: 402 AEKCAICGHLIMEMI--LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
A CA C I L + +H GCFRC C + L PF D KI C R
Sbjct: 96 ANTCAECRKPIGADAKELNHKNRHWHEGCFRCAKCYKPLANEPFQAKDDGKIMCGKCGDR 155
Query: 460 MFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR 519
+P+C C K ITP G + V K +H +C+ C +C + + + +G
Sbjct: 156 DGSPRCQGCYKVITP--GCKN---VEYKHKVWHEECFTCFECKQPIRTQS----FLTKGD 206
Query: 520 LM-CRACHLSHLSRH 533
M C CH ++H
Sbjct: 207 DMYCTPCHEKKFAKH 221
Score = 102 (41.0 bits), Expect = 0.00031, Sum P(2) = 0.00031
Identities = 29/113 (25%), Positives = 45/113 (39%)
Query: 422 KSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEET 481
K +H CF C C + + F D+ +YC + + FA C C + IT G
Sbjct: 180 KVWHEECFTCFECKQPIRTQSFLTKGDD-MYCTPCHEKKFAKHCVRCKEAIT--SGG--- 233
Query: 482 VRVVSMDKDFHVDCYMCEDC-----GLQLTDEPDK----RCYPLQGRLMCRAC 525
+ D+ +H +C++C C G + T D+ CY C C
Sbjct: 234 --LTYQDQPWHSECFVCHTCKKPLAGARFTAHEDQFYCVDCYKSDVAKKCSGC 284
Score = 59 (25.8 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 20/79 (25%), Positives = 33/79 (41%)
Query: 318 IC-HTCGE--KVTGA-GQACQAMGNLYHTNCFICCSCGRALRGKAFY-NVHGRVYCEEDY 372
+C +TC E K GA + +H CF C C + L + F G++ C +
Sbjct: 94 LCANTCAECRKPIGADAKELNHKNRHWHEGCFRCAKCYKPLANEPFQAKDDGKIMCGK-- 151
Query: 373 LYSGFQQTAEKCAICGHLI 391
G + + +C C +I
Sbjct: 152 --CGDRDGSPRCQGCYKVI 168
>UNIPROTKB|H0YIE4 [details] [associations]
symbol:PXN "Paxillin" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC004263
HGNC:HGNC:9718 ChiTaRS:PXN Ensembl:ENST00000550795 Uniprot:H0YIE4
Length = 171
Score = 128 (50.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 24/64 (37%), Positives = 34/64 (53%)
Query: 405 CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPK 464
C C I ++ AMGK++HP F C C E + F + D + YC DYH +F+P+
Sbjct: 107 CGACKKPIAGQVVTAMGKTWHPEHFVCTHCQEEIGSRNF-FERDGQPYCEKDYHNLFSPR 165
Query: 465 CAAC 468
C C
Sbjct: 166 CYYC 169
Score = 115 (45.5 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 20/56 (35%), Positives = 30/56 (53%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY 372
G+C C + + AGQ AMG +H F+C C + + F+ G+ YCE+DY
Sbjct: 105 GVCGACKKPI--AGQVVTAMGKTWHPEHFVCTHCQEEIGSRNFFERDGQPYCEKDY 158
Score = 37 (18.1 bits), Expect = 3.4e-09, Sum P(2) = 3.4e-09
Identities = 6/8 (75%), Positives = 7/8 (87%)
Query: 196 PPKPGPQV 203
PPKPG Q+
Sbjct: 76 PPKPGSQL 83
>UNIPROTKB|F1SNZ3 [details] [associations]
symbol:LIMD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000637 "positive regulation of gene silencing by
miRNA" evidence=IEA] [GO:0090090 "negative regulation of canonical
Wnt receptor signaling pathway" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045668 "negative regulation of osteoblast differentiation"
evidence=IEA] [GO:0035331 "negative regulation of hippo signaling
cascade" evidence=IEA] [GO:0035195 "gene silencing by miRNA"
evidence=IEA] [GO:0033962 "cytoplasmic mRNA processing body
assembly" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
[GO:0016442 "RNA-induced silencing complex" evidence=IEA]
[GO:0016310 "phosphorylation" evidence=IEA] [GO:0008360 "regulation
of cell shape" evidence=IEA] [GO:0007010 "cytoskeleton
organization" evidence=IEA] [GO:0005925 "focal adhesion"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0002076
"osteoblast development" evidence=IEA] [GO:0001666 "response to
hypoxia" evidence=IEA] [GO:0000932 "cytoplasmic mRNA processing
body" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0007010 GO:GO:0016477
GO:GO:0008360 GO:GO:0016310 GO:GO:0008270 GO:GO:0001666
GO:GO:0005925 Gene3D:2.10.110.10 GO:GO:0002076 GO:GO:0090090
GO:GO:0000932 GO:GO:0016442 GO:GO:0035195
GeneTree:ENSGT00610000085810 GO:GO:0035331 GO:GO:2000637
GO:GO:0045668 GO:GO:0033962 OMA:SLASPKW EMBL:CU856104 EMBL:FP331358
Ensembl:ENSSSCT00000012385 Uniprot:F1SNZ3
Length = 514
Score = 166 (63.5 bits), Expect = 3.9e-09, P = 3.9e-09
Identities = 35/80 (43%), Positives = 40/80 (50%)
Query: 276 LPYNVTPPRP-MGPTEAERKIXXXXXXXXXXXXXXXXXXXYFGICHTCGEKVTGAGQACQ 334
LP P P +GPT AE K+ YFG C C + V GAGQACQ
Sbjct: 424 LPCQTLVPGPELGPTAAELKLEALTQRLEREMDAHPKAD-YFGACVKCSKGVFGAGQACQ 482
Query: 335 AMGNLYHTNCFICCSCGRAL 354
AMGNLYH CF C +C + L
Sbjct: 483 AMGNLYHDACFTCAACSKCL 502
>ZFIN|ZDB-GENE-990415-133 [details] [associations]
symbol:isl2b "islet2b" species:7955 "Danio rerio"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-990415-133 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG264882 GeneTree:ENSGT00700000104050 HOVERGEN:HBG004671
HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR EMBL:D38454 EMBL:AL845510
EMBL:BC095011 EMBL:U09404 IPI:IPI00485578 PIR:I51735
RefSeq:NP_571039.1 UniGene:Dr.20916 ProteinModelPortal:P53407
SMR:P53407 STRING:P53407 Ensembl:ENSDART00000055936 GeneID:30151
KEGG:dre:30151 CTD:30151 InParanoid:P53407 OMA:HAHKQAE
NextBio:20806624 Bgee:P53407 Uniprot:P53407
Length = 358
Score = 163 (62.4 bits), Expect = 4.0e-09, P = 4.0e-09
Identities = 40/130 (30%), Positives = 57/130 (43%)
Query: 405 CAICGHLIMEMILQAMGKS--YHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
C CG I + + + +H C +C CN+ LD D K YC DY R+F
Sbjct: 27 CVGCGSQIHDQYILRVSPDLEWHAACLKCVECNQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMC 522
KCA C G + ++ +R + D +H++C+ C C QL P L+C
Sbjct: 87 IKCAKCTLGFS---SSDLVMR--ARDSVYHIECFRCSVCSRQLL--PGDEFSVRDEELLC 139
Query: 523 RACHLSHLSR 532
RA H L R
Sbjct: 140 RADHGLALER 149
>UNIPROTKB|E2R9P5 [details] [associations]
symbol:CSRP3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060048 "cardiac muscle contraction"
evidence=IEA] [GO:0055003 "cardiac myofibril assembly"
evidence=IEA] [GO:0042805 "actinin binding" evidence=IEA]
[GO:0035995 "detection of muscle stretch" evidence=IEA] [GO:0033365
"protein localization to organelle" evidence=IEA] [GO:0031433
"telethonin binding" evidence=IEA] [GO:0030018 "Z disc"
evidence=IEA] [GO:0008307 "structural constituent of muscle"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0003300 "cardiac muscle hypertrophy"
evidence=IEA] [GO:0002026 "regulation of the force of heart
contraction" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0030018 GO:GO:0008270
GO:GO:0048738 Gene3D:2.10.110.10 GO:GO:0006874 GO:GO:0002026
GeneTree:ENSGT00550000074548 KO:K09377 CTD:8048 OMA:KYGPKGI
EMBL:AAEX03012974 RefSeq:XP_852328.1 Ensembl:ENSCAFT00000014992
GeneID:610946 KEGG:cfa:610946 NextBio:20896492 Uniprot:E2R9P5
Length = 194
Score = 116 (45.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+EKC CG + E ++ GK +H CFRC +C + L+ T D D ++YC Y +
Sbjct: 117 SEKCPRCGKSVYAAEKVMGG-GKPWHKTCFRCAICGKSLESTNVT-DKDGELYCKVCYAK 174
Query: 460 MFAPKCAACGKGITP-VEGTE 479
F P G G+T VE E
Sbjct: 175 NFGPTGIGFG-GLTQQVEKKE 194
Score = 109 (43.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC C + +Q G+S+H CF C C + LD +++IYC Y R +
Sbjct: 9 KCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAH-ESEIYCKVCYGRRYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGIGYGQG 76
Score = 83 (34.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
KC CGK + E +V+ K +H C+ C CG L+ T+ DK G L
Sbjct: 119 KCPRCGKSVYAAE------KVMGGGKPWHKTCFRCAICGKSLESTNVTDK-----DGELY 167
Query: 522 CRACH 526
C+ C+
Sbjct: 168 CKVCY 172
Score = 78 (32.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY 372
C C EK + Q G +H CF C +C +AL +YC+ Y
Sbjct: 10 CGAC-EKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCY 62
>UNIPROTKB|P50461 [details] [associations]
symbol:CSRP3 "Cysteine and glycine-rich protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007519 "skeletal muscle tissue development"
evidence=TAS] [GO:0035995 "detection of muscle stretch"
evidence=IMP] [GO:0060048 "cardiac muscle contraction"
evidence=IMP] [GO:0033365 "protein localization to organelle"
evidence=IMP] [GO:0030018 "Z disc" evidence=IDA] [GO:0008307
"structural constituent of muscle" evidence=IMP] [GO:0031433
"telethonin binding" evidence=IDA;IPI] [GO:0055003 "cardiac
myofibril assembly" evidence=ISS] [GO:0042805 "actinin binding"
evidence=ISS] [GO:0002026 "regulation of the force of heart
contraction" evidence=ISS] [GO:0003300 "cardiac muscle hypertrophy"
evidence=IMP] [GO:0006874 "cellular calcium ion homeostasis"
evidence=ISS] [GO:0048738 "cardiac muscle tissue development"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0030018
GO:GO:0005856 GO:GO:0046872 GO:GO:0003300 GO:GO:0008270
Orphanet:155 Orphanet:154 Gene3D:2.10.110.10 GO:GO:0001974
GO:GO:0006874 GO:GO:0055003 GO:GO:0060048 GO:GO:0008307
GO:GO:0002026 GO:GO:0033365 GO:GO:0007519 HOVERGEN:HBG051143
KO:K09377 HOGENOM:HOG000111233 CTD:8048 eggNOG:NOG294681
OMA:KYGPKGI OrthoDB:EOG470TJ6 EMBL:U20324 EMBL:U49837 EMBL:U72898
EMBL:U72894 EMBL:U72895 EMBL:U72896 EMBL:U72897 EMBL:U72899
EMBL:AF121260 EMBL:BC005900 EMBL:BC024010 EMBL:BC057221
IPI:IPI00032164 RefSeq:NP_003467.1 UniGene:Hs.83577 PDB:2O10
PDB:2O13 PDBsum:2O10 PDBsum:2O13 ProteinModelPortal:P50461
SMR:P50461 IntAct:P50461 STRING:P50461 PhosphoSite:P50461
DMDM:1705933 PaxDb:P50461 PeptideAtlas:P50461 PRIDE:P50461
DNASU:8048 Ensembl:ENST00000265968 Ensembl:ENST00000533783
GeneID:8048 KEGG:hsa:8048 UCSC:uc001mpk.2 GeneCards:GC11M019160
HGNC:HGNC:2472 HPA:HPA042581 MIM:600824 MIM:607482 MIM:612124
neXtProt:NX_P50461 PharmGKB:PA26971 InParanoid:P50461
PhylomeDB:P50461 EvolutionaryTrace:P50461 GenomeRNAi:8048
NextBio:30640 ArrayExpress:P50461 Bgee:P50461 CleanEx:HS_CSRP3
Genevestigator:P50461 GermOnline:ENSG00000129170 GO:GO:0042805
GO:GO:0031433 GO:GO:0035995 Uniprot:P50461
Length = 194
Score = 116 (45.9 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+EKC CG + E ++ GK +H CFRC +C + L+ T D D ++YC Y +
Sbjct: 117 SEKCPRCGKSVYAAEKVMGG-GKPWHKTCFRCAICGKSLESTNVT-DKDGELYCKVCYAK 174
Query: 460 MFAPKCAACGKGITP-VEGTE 479
F P G G+T VE E
Sbjct: 175 NFGPTGIGFG-GLTQQVEKKE 194
Score = 109 (43.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC C + +Q G+S+H CF C C + LD +++IYC Y R +
Sbjct: 9 KCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAH-ESEIYCKVCYGRRYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGIGYGQG 76
Score = 83 (34.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
KC CGK + E +V+ K +H C+ C CG L+ T+ DK G L
Sbjct: 119 KCPRCGKSVYAAE------KVMGGGKPWHKTCFRCAICGKSLESTNVTDK-----DGELY 167
Query: 522 CRACH 526
C+ C+
Sbjct: 168 CKVCY 172
Score = 78 (32.5 bits), Expect = 4.1e-09, Sum P(2) = 4.1e-09
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY 372
C C EK + Q G +H CF C +C +AL +YC+ Y
Sbjct: 10 CGAC-EKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCY 62
>UNIPROTKB|Q6DJ06 [details] [associations]
symbol:lmo4.2 "LIM domain transcription factor LMO4.2"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003712
"transcription cofactor activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=ISS] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007498 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 GO:GO:0045665 GO:GO:0006351
Gene3D:2.10.110.10 GO:GO:0003712 GO:GO:0007369
GeneTree:ENSGT00700000104177 HSSP:P61969 HOGENOM:HOG000232175
HOVERGEN:HBG054231 eggNOG:NOG314117 EMBL:CR760333 EMBL:BC075379
RefSeq:NP_001004922.1 UniGene:Str.145 ProteinModelPortal:Q6DJ06
SMR:Q6DJ06 Ensembl:ENSXETT00000053847 GeneID:448304 KEGG:xtr:448304
CTD:447751 Xenbase:XB-GENE-971939 InParanoid:Q6DJ06 OMA:ALSWKRC
Bgee:Q6DJ06 Uniprot:Q6DJ06
Length = 165
Score = 143 (55.4 bits), Expect = 4.2e-09, P = 4.2e-09
Identities = 38/124 (30%), Positives = 59/124 (47%)
Query: 403 EKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDN-KIYCVNDYHRM 460
++CA CG I + +L AM +H C +C C L + + + I C NDY R+
Sbjct: 21 KRCAGCGGKIADRFLLYAMDSYWHSRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRL 80
Query: 461 FAPK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQG 518
F C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G
Sbjct: 81 FGNSGACSACGQSI-PA--SELVMR--AQGNVYHLKCFTCSTCRNRLV--PGDRFHYING 133
Query: 519 RLMC 522
L C
Sbjct: 134 SLFC 137
Score = 129 (50.5 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A GN+YH CF C +C R + G F+ ++G ++CE D
Sbjct: 85 GACSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHYINGSLFCEHD 140
Score = 89 (36.4 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVND 456
C+ CG I E++++A G YH CF C C N + G F ++ ++C +D
Sbjct: 87 CSACGQSIPASELVMRAQGNVYHLKCFTCSTCRNRLVPGDRFHY-INGSLFCEHD 140
Score = 84 (34.6 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 22/75 (29%), Positives = 31/75 (41%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALR--GKAFYNVHGRVYCEEDYLYSG 376
C CG K+ AM + +H+ C C C L G + Y G + C DY+
Sbjct: 23 CAGCGGKIADRF-LLYAMDSYWHSRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRL- 80
Query: 377 FQQTAEKCAICGHLI 391
F + C+ CG I
Sbjct: 81 FGNSGA-CSACGQSI 94
>MGI|MGI:1341092 [details] [associations]
symbol:Fhl3 "four and a half LIM domains 3" species:10090
"Mus musculus" [GO:0001725 "stress fiber" evidence=IDA] [GO:0003779
"actin binding" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030018 "Z disc"
evidence=IDA] [GO:0030036 "actin cytoskeleton organization"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 MGI:MGI:1341092 GO:GO:0005634 GO:GO:0003779
GO:GO:0030018 GO:GO:0046872 GO:GO:0030036 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0001725 eggNOG:NOG314122
HOVERGEN:HBG074526 GeneTree:ENSGT00690000101670
HOGENOM:HOG000231075 CTD:2275 OMA:QFTSRDD EMBL:AF134772
EMBL:AF114382 EMBL:AL606907 EMBL:BC144903 EMBL:BC145939
EMBL:AF149826 IPI:IPI00345772 IPI:IPI00828338 RefSeq:NP_034343.2
UniGene:Mm.331856 ProteinModelPortal:Q9R059 MINT:MINT-4788495
STRING:Q9R059 PhosphoSite:Q9R059 PaxDb:Q9R059 PRIDE:Q9R059
Ensembl:ENSMUST00000038684 GeneID:14201 KEGG:mmu:14201
InParanoid:Q9R059 NextBio:285438 CleanEx:MM_FHL3
Genevestigator:Q9R059 GermOnline:ENSMUSG00000032643 Uniprot:Q9R059
Length = 289
Score = 160 (61.4 bits), Expect = 4.4e-09, P = 4.4e-09
Identities = 55/224 (24%), Positives = 87/224 (38%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFI------CCSCGRALR-GKAFYNVHGRVYCEED 371
C C + CQ L C+ C +CG + G G+ + E
Sbjct: 68 CCRCQRSLADEPFTCQD-SELLCNECYCTAFSSQCSACGETVMPGSRKLEYGGQTWHEHC 126
Query: 372 YLYSGFQQTAEKCAIC----GHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPG 427
+L SG +Q + H + Y + A +CA C + + + + +H
Sbjct: 127 FLCSGCEQPLGSRSFVPDKGAHYCVPCYEN--KFAPRCARCSKTLTQGGVTYRDQPWHRE 184
Query: 428 CFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETV----- 482
C C C L G FT D+ YCV + +FAPKC++C + IT G E
Sbjct: 185 CLVCTGCKTPLAGQQFT-SRDDDPYCVACFGELFAPKCSSCKRPITGGSGGGEGAGLGGG 243
Query: 483 RVVSM-DKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRAC 525
+ VS D+ +H C+ C C L + P +++C+ C
Sbjct: 244 KYVSFEDRHWHHSCFSCARCSTSLVGQG---FVPDGDQVLCQGC 284
Score = 157 (60.3 bits), Expect = 9.9e-09, P = 9.9e-09
Identities = 37/130 (28%), Positives = 61/130 (46%)
Query: 398 FQQTAEKCA-ICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVND 456
F T +C + GH E+ + + +H GCFRCC C L PFT D+++ C
Sbjct: 36 FANTCAECQQLIGHDSRELFYE--DRHFHEGCFRCCRCQRSLADEPFTCQ-DSELLCNEC 92
Query: 457 YHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL 516
Y F+ +C+ACG+ + P G+ ++ + +H C++C C L + P
Sbjct: 93 YCTAFSSQCSACGETVMP--GSR---KLEYGGQTWHEHCFLCSGCEQPLGS---RSFVPD 144
Query: 517 QGRLMCRACH 526
+G C C+
Sbjct: 145 KGAHYCVPCY 154
Score = 127 (49.8 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 34/103 (33%), Positives = 46/103 (44%)
Query: 429 FRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMD 488
F C CNE L G + + D+ YCV Y FA CA C + I G ++ + D
Sbjct: 5 FDCAKCNESLYGRKY-IQTDSGPYCVPCYDNTFANTCAECQQLI----G-HDSRELFYED 58
Query: 489 KDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLSHLS 531
+ FH C+ C C L DEP C L+C C+ + S
Sbjct: 59 RHFHEGCFRCCRCQRSLADEPFT-CQ--DSELLCNECYCTAFS 98
>UNIPROTKB|A2I8Z7 [details] [associations]
symbol:lhx9 "LIM/homeobox protein Lhx9" species:223369
"Astyanax fasciatus" [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0003714 GO:GO:0045892 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0008045 HOVERGEN:HBG006262 EMBL:EF175738
ProteinModelPortal:A2I8Z7 Uniprot:A2I8Z7
Length = 377
Score = 163 (62.4 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 42/142 (29%), Positives = 67/142 (47%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 52 CAGCGSKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 111
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 112 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCTSCNKTLTTGDH---FGMRENLVY 163
Query: 522 CRACHLSHLSRHHQSPTDLQDV 543
CRA S + + +P + ++
Sbjct: 164 CRAHFESLVQGEYHAPLNYAEL 185
>ZFIN|ZDB-GENE-041010-119 [details] [associations]
symbol:csrp3 "cysteine and glycine-rich protein 3
(cardiac LIM protein)" species:7955 "Danio rerio" [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0045214 "sarcomere organization" evidence=IMP]
[GO:0060047 "heart contraction" evidence=IMP] [GO:0046872 "metal
ion binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
ZFIN:ZDB-GENE-041010-119 GO:GO:0046872 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0060047 GO:GO:0045214 HOVERGEN:HBG051143
KO:K09377 HOGENOM:HOG000111233 CTD:8048 eggNOG:NOG294681
OrthoDB:EOG470TJ6 EMBL:BC083395 IPI:IPI00899252
RefSeq:NP_001006026.1 UniGene:Dr.85255 ProteinModelPortal:Q5XJA9
SMR:Q5XJA9 GeneID:450005 KEGG:dre:450005 InParanoid:Q5XJA9
NextBio:20832988 Uniprot:Q5XJA9
Length = 193
Score = 119 (46.9 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 29/84 (34%), Positives = 43/84 (51%)
Query: 401 TAEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
+ ++C C + E I+ A GK +H CFRC LC + L+ T D D ++YC Y
Sbjct: 116 STDRCPRCSKAVYAAEKIMGA-GKPWHKTCFRCLLCGKSLESTTVT-DKDGELYCKVCYA 173
Query: 459 RMFAPKCAACGKGITPVEGTEETV 482
+ F PK G+G+ EE+V
Sbjct: 174 KNFGPK----GRGLRNPGMVEESV 193
Score = 102 (41.0 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 21/69 (30%), Positives = 33/69 (47%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KCA C + +Q +S+H CF C +C + LD +++IYC Y + +
Sbjct: 9 KCAACEKTVYHAEEIQCNSRSFHKTCFICMVCRKGLDSTTVAAH-ESEIYCKTCYGKKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGYGYGQG 76
Score = 73 (30.8 bits), Expect = 4.8e-09, Sum P(2) = 4.8e-09
Identities = 15/54 (27%), Positives = 20/54 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY 372
C C EK + Q +H CFIC C + L +YC+ Y
Sbjct: 10 CAAC-EKTVYHAEEIQCNSRSFHKTCFICMVCRKGLDSTTVAAHESEIYCKTCY 62
Score = 70 (29.7 bits), Expect = 1.9e-06, Sum P(2) = 1.9e-06
Identities = 18/65 (27%), Positives = 28/65 (43%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
+C C K + E +++ K +H C+ C CG L+ T DK G L
Sbjct: 119 RCPRCSKAVYAAE------KIMGAGKPWHKTCFRCLLCGKSLESTTVTDK-----DGELY 167
Query: 522 CRACH 526
C+ C+
Sbjct: 168 CKVCY 172
>ZFIN|ZDB-GENE-040426-2092 [details] [associations]
symbol:pdlim7 "PDZ and LIM domain 7" species:7955
"Danio rerio" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001756 "somitogenesis" evidence=IMP] [GO:0003143 "embryonic
heart tube morphogenesis" evidence=IGI] [GO:0031941 "filamentous
actin" evidence=IDA] [GO:0003294 "atrial ventricular junction
remodeling" evidence=IMP] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0003190 "atrioventricular valve
formation" evidence=IMP] [GO:0015629 "actin cytoskeleton"
evidence=IPI] [GO:0001947 "heart looping" evidence=IGI;IMP]
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106
SMART:SM00132 SMART:SM00228 ZFIN:ZDB-GENE-040426-2092 GO:GO:0048471
GO:GO:0046872 GO:GO:0008270 GO:GO:0001756 Gene3D:2.10.110.10
GO:GO:0031941 SUPFAM:SSF50156 GO:GO:0001947 GO:GO:0003294
GO:GO:0003190 eggNOG:NOG286537 HOVERGEN:HBG051478 CTD:9260
EMBL:BC061704 IPI:IPI00493189 RefSeq:NP_957134.1 UniGene:Dr.118064
UniGene:Dr.121170 UniGene:Dr.85085 ProteinModelPortal:Q6P7E4
SMR:Q6P7E4 STRING:Q6P7E4 PRIDE:Q6P7E4 GeneID:393813 KEGG:dre:393813
InParanoid:Q6P7E4 NextBio:20814803 Uniprot:Q6P7E4
Length = 419
Score = 166 (63.5 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 36/104 (34%), Positives = 52/104 (50%)
Query: 405 CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPK 464
CA C +I + A+G+S+HP F CC C LD F + IYC Y ++P
Sbjct: 244 CAACSKIIRGRYVVALGRSWHPEEFMCCQCKRLLDEGGF-FEEKGSIYCSKCYDNRYSPN 302
Query: 465 CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDE 508
CA C K IT G E + + M +HV C++C C L + ++
Sbjct: 303 CAKCKKIIT---G--EIMHALKMT--YHVQCFLCAACKLPIRNQ 339
Score = 127 (49.8 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 32/95 (33%), Positives = 42/95 (44%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C C + +TG + A+ YH CF+C +C +R +AFY G YCE DY F
Sbjct: 303 CAKCKKIITG--EIMHALKMTYHVQCFLCAACKLPIRNQAFYMEEGEPYCERDY-EKMFG 359
Query: 379 QTAEKCAI---CGHLIMEM--YSGFQQTAEKCAIC 408
C G +E YS + T CAIC
Sbjct: 360 TKCHGCDFKIDAGDRFLEALGYS-WHDTCFVCAIC 393
Score = 39 (18.8 bits), Expect = 4.9e-09, Sum P(2) = 4.9e-09
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 207 GGEHRQMAIALTSPPVYSRANTVTSKAVPVKTATSLSVTP 246
GGE + + +S P YS A S A+ K A S +P
Sbjct: 89 GGEQKDSLTSSSSQPKYSFA---PSTAIN-KMARPFSASP 124
>UNIPROTKB|E1C557 [details] [associations]
symbol:Gga.6147 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003779 "actin binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR003128 Pfam:PF02209
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51089 SMART:SM00132
SMART:SM00153 GO:GO:0007010 GO:GO:0046872 GO:GO:0008270
GO:GO:0045944 Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
GeneTree:ENSGT00700000104021 OMA:DPYYASE EMBL:AADN02074945
EMBL:AADN02074946 EMBL:AADN02074947 EMBL:AADN02074948
EMBL:AADN02074949 EMBL:AADN02074950 EMBL:AADN02074951
EMBL:AADN02074952 EMBL:AADN02074953 EMBL:AADN02074954
IPI:IPI00585380 Ensembl:ENSGALT00000004410 Uniprot:E1C557
Length = 589
Score = 166 (63.5 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 44/156 (28%), Positives = 66/156 (42%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C +CG+ +TG + A+G YH CF+C +C + + + +V +SG
Sbjct: 82 CDSCGDFITG--EVISALGRTYHPKCFVCSTCRKP------FPIGDKV------TFSGKD 127
Query: 379 QTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNEC 437
C C H ++ CA C I + L A+ K +H CF+C C
Sbjct: 128 CV---CQNCSHSLISTKPIKIHGPSHCAGCKEEIKQGQSLLALEKQWHVSCFKCQTCGII 184
Query: 438 LDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGIT 473
L G + D YC +DYH F KC C + I+
Sbjct: 185 LTGE--YISKDGVPYCESDYHAQFGIKCETCDRYIS 218
Score = 165 (63.1 bits), Expect = 6.4e-09, P = 6.4e-09
Identities = 48/177 (27%), Positives = 79/177 (44%)
Query: 347 CCSCGRALRGKAFY----NVHGRVY----CEEDYLYSGFQQTAEKCAICGHLIMEMYSGF 398
C CG +G+ + H R + C D SGF ++ IC H ++Y
Sbjct: 23 CYRCGDTCKGEVVRVQSNHFHIRCFTCQVCGWDLAQSGFFFKNQEY-ICTHDYQQLYG-- 79
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFTVDVDNKIYCVN 455
+C CG I ++ A+G++YHP CF C C + D V F+ C N
Sbjct: 80 ----TRCDSCGDFITGEVISALGRTYHPKCFVCSTCRKPFPIGDKVTFS---GKDCVCQN 132
Query: 456 DYHRMFAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLTDE 508
H + + K G + G +E ++ +++++K +HV C+ C+ CG+ LT E
Sbjct: 133 CSHSLISTKPIKI-HGPSHCAGCKEEIKQGQSLLALEKQWHVSCFKCQTCGIILTGE 188
>UNIPROTKB|Q13643 [details] [associations]
symbol:FHL3 "Four and a half LIM domains protein 3"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001725 "stress fiber" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0030018 "Z disc" evidence=IEA] [GO:0030036 "actin cytoskeleton
organization" evidence=IEA] [GO:0007517 "muscle organ development"
evidence=TAS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0030018
GO:GO:0046872 EMBL:CH471059 GO:GO:0030036 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0007517 GO:GO:0001725 eggNOG:NOG314122
HOVERGEN:HBG074526 HOGENOM:HOG000231075 CTD:2275 OMA:QFTSRDD
OrthoDB:EOG46144B EMBL:U60116 EMBL:AK290641 EMBL:BT007052
EMBL:CR457425 EMBL:AL603790 EMBL:BC001351 EMBL:BC011697
IPI:IPI00014399 PIR:T09504 RefSeq:NP_001230807.1 RefSeq:NP_004459.2
UniGene:Hs.57687 PDB:1WYH PDB:2CUQ PDB:2EHE PDBsum:1WYH PDBsum:2CUQ
PDBsum:2EHE ProteinModelPortal:Q13643 SMR:Q13643 IntAct:Q13643
MINT:MINT-155453 STRING:Q13643 PhosphoSite:Q13643 DMDM:209572768
PaxDb:Q13643 PRIDE:Q13643 DNASU:2275 Ensembl:ENST00000373016
GeneID:2275 KEGG:hsa:2275 UCSC:uc001cck.3 GeneCards:GC01M038462
HGNC:HGNC:3704 HPA:HPA045723 MIM:602790 neXtProt:NX_Q13643
PharmGKB:PA28142 InParanoid:Q13643 PhylomeDB:Q13643 ChiTaRS:FHL3
EvolutionaryTrace:Q13643 GenomeRNAi:2275 NextBio:9257
ArrayExpress:Q13643 Bgee:Q13643 CleanEx:HS_FHL3
Genevestigator:Q13643 GermOnline:ENSG00000183386 Uniprot:Q13643
Length = 280
Score = 159 (61.0 bits), Expect = 5.0e-09, P = 5.0e-09
Identities = 53/219 (24%), Positives = 87/219 (39%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFI------CCSCGRALR-GKAFYNVHGRVYCEED 371
C C + CQ L +C+ C +CG + G G+ + E
Sbjct: 68 CCRCQRSLADEPFTCQD-SELLCNDCYCSAFSSQCSACGETVMPGSRKLEYGGQTWHEHC 126
Query: 372 YLYSGFQQTAEKCAIC----GHLIMEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPG 427
+L SG +Q + H + Y + A +CA C + + + + +H
Sbjct: 127 FLCSGCEQPLGSRSFVPDKGAHYCVPCYEN--KFAPRCARCSKTLTQGGVTYRDQPWHRE 184
Query: 428 CFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSM 487
C C C L G FT D YCV + +FAPKC++C + I + G + VS
Sbjct: 185 CLVCTGCQTPLAGQQFT-SRDEDPYCVACFGELFAPKCSSCKRPIVGLGGG----KYVSF 239
Query: 488 -DKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRAC 525
D+ +H +C+ C C L + P +++C+ C
Sbjct: 240 EDRHWHHNCFSCARCSTSLVGQG---FVPDGDQVLCQGC 275
Score = 158 (60.7 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 37/130 (28%), Positives = 62/130 (47%)
Query: 398 FQQTAEKCA-ICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVND 456
F T +C + GH E+ + + +H GCFRCC C L PFT D+++ C +
Sbjct: 36 FANTCAECQQLIGHDSRELFYE--DRHFHEGCFRCCRCQRSLADEPFTCQ-DSELLCNDC 92
Query: 457 YHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL 516
Y F+ +C+ACG+ + P G+ ++ + +H C++C C L + P
Sbjct: 93 YCSAFSSQCSACGETVMP--GSR---KLEYGGQTWHEHCFLCSGCEQPLGS---RSFVPD 144
Query: 517 QGRLMCRACH 526
+G C C+
Sbjct: 145 KGAHYCVPCY 154
Score = 129 (50.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/103 (33%), Positives = 46/103 (44%)
Query: 429 FRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMD 488
F C CNE L G + + D+ YCV Y FA CA C + I G ++ + D
Sbjct: 5 FDCAKCNESLYGRKY-IQTDSGPYCVPCYDNTFANTCAECQQLI----G-HDSRELFYED 58
Query: 489 KDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACHLSHLS 531
+ FH C+ C C L DEP C L+C C+ S S
Sbjct: 59 RHFHEGCFRCCRCQRSLADEPFT-CQ--DSELLCNDCYCSAFS 98
>ZFIN|ZDB-GENE-980526-116 [details] [associations]
symbol:lhx1b "LIM homeobox 1b" species:7955 "Danio
rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389
ZFIN:ZDB-GENE-980526-116 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 HSSP:P06601 GeneTree:ENSGT00700000104177
eggNOG:NOG257130 HOGENOM:HOG000231630 HOVERGEN:HBG006263
EMBL:BX255908 EMBL:AF001299 EMBL:BC162280 EMBL:BC162303
IPI:IPI00505711 RefSeq:NP_571282.1 UniGene:Dr.277
Ensembl:ENSDART00000021159 GeneID:30454 KEGG:dre:30454 CTD:30454
InParanoid:O13106 OrthoDB:EOG49CQ7Z NextBio:20806849 Uniprot:O13106
Length = 402
Score = 163 (62.4 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 37/127 (29%), Positives = 67/127 (52%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C I++ +L + +++H C +CC C L F+ + ++YC ND+ R +
Sbjct: 4 CAGCERPILDRFLLSVLDRAWHAKCVQCCDCKCSLTDRCFSRE--GRLYCKNDFFRRYGT 61
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPL-QGRLMC 522
KC C +GI+P + VR + K FH++C+ C C QL+ + Y L + + +C
Sbjct: 62 KCGGCAQGISP----SDLVRK-ARSKVFHLNCFTCIMCNKQLST--GEELYILDEYKFVC 114
Query: 523 RACHLSH 529
+ +L++
Sbjct: 115 KEDYLNN 121
>UNIPROTKB|E2R2S6 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00680000099670
EMBL:AAEX03005042 SMR:E2R2S6 Ensembl:ENSCAFT00000018020
Uniprot:E2R2S6
Length = 330
Score = 161 (61.7 bits), Expect = 5.3e-09, P = 5.3e-09
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 131 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCSTCNKTLTTGDH---FGMKDSLVY 182
Query: 522 CRACHLSHLSRHHQSP 537
CRA H L + P
Sbjct: 183 CRA-HFETLLQGEYPP 197
>UNIPROTKB|H9L2C7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001890
"placenta development" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0009887 "organ morphogenesis"
evidence=IEA] [GO:0021526 "medial motor column neuron
differentiation" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104177 EMBL:AADN02073379 EMBL:AADN02073380
Ensembl:ENSGALT00000035845 OMA:ERSWHSK Uniprot:H9L2C7
Length = 237
Score = 155 (59.6 bits), Expect = 5.5e-09, P = 5.5e-09
Identities = 37/122 (30%), Positives = 60/122 (49%)
Query: 404 KCAICG-HLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
+CA C H++ + IL+ + + +H C +C C L F +YC D+ + F
Sbjct: 4 QCAGCSQHILDKFILKVLDRHWHSSCLKCADCQMQLAERCFARA--GSVYCKEDFFKRFG 61
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQ-GRLM 521
KC AC +GI P + VR + D +H+ C+ C C QL + Y ++ GRL+
Sbjct: 62 TKCTACQQGIPPTQ----VVRK-AQDFVYHLHCFACIICSRQLATGDE--FYLMEDGRLV 114
Query: 522 CR 523
C+
Sbjct: 115 CK 116
>UNIPROTKB|H0YL54 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
Pfam:PF00046 PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071
SMART:SM00132 SMART:SM00389 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:AL590115 HGNC:HGNC:14222
ProteinModelPortal:H0YL54 SMR:H0YL54 Ensembl:ENST00000561173
Bgee:H0YL54 Uniprot:H0YL54
Length = 336
Score = 161 (61.7 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 77 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 136
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 137 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCSTCNKTLTTGDH---FGMKDSLVY 188
Query: 522 CRACHLSHLSRHHQSP 537
CRA H L + P
Sbjct: 189 CRA-HFETLLQGEYPP 203
>UNIPROTKB|Q4U0T9 [details] [associations]
symbol:CSRP3 "Cysteine and glycine-rich protein 3"
species:9913 "Bos taurus" [GO:0030018 "Z disc" evidence=IEA]
[GO:0005856 "cytoskeleton" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0060048 "cardiac muscle contraction"
evidence=IEA] [GO:0055003 "cardiac myofibril assembly"
evidence=IEA] [GO:0042805 "actinin binding" evidence=IEA]
[GO:0035995 "detection of muscle stretch" evidence=IEA] [GO:0033365
"protein localization to organelle" evidence=IEA] [GO:0031433
"telethonin binding" evidence=IEA] [GO:0008307 "structural
constituent of muscle" evidence=IEA] [GO:0006874 "cellular calcium
ion homeostasis" evidence=IEA] [GO:0003300 "cardiac muscle
hypertrophy" evidence=IEA] [GO:0002026 "regulation of the force of
heart contraction" evidence=IEA] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0005634 GO:GO:0030154
GO:GO:0030018 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0048738 Gene3D:2.10.110.10 GO:GO:0007517 GO:GO:0006874
GO:GO:0002026 GeneTree:ENSGT00550000074548 HOVERGEN:HBG051143
KO:K09377 HOGENOM:HOG000111233 EMBL:DQ022067 EMBL:BC103108
IPI:IPI00693233 RefSeq:NP_001019860.1 UniGene:Bt.34390
ProteinModelPortal:Q4U0T9 SMR:Q4U0T9 STRING:Q4U0T9 PRIDE:Q4U0T9
Ensembl:ENSBTAT00000030320 GeneID:540407 KEGG:bta:540407 CTD:8048
eggNOG:NOG294681 InParanoid:Q4U0T9 OMA:KYGPKGI OrthoDB:EOG470TJ6
NextBio:20878615 Uniprot:Q4U0T9
Length = 194
Score = 115 (45.5 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+EKC CG + E ++ GK +H CFRC +C + L+ T D D ++YC Y +
Sbjct: 117 SEKCPRCGKSVYAAEKVMGG-GKPWHKTCFRCAICGKSLESTNVT-DKDGELYCKVCYAK 174
Query: 460 MFAPKCAACGKGIT 473
F P G G+T
Sbjct: 175 NFGPTGIGFG-GLT 187
Score = 109 (43.4 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC C + +Q G+S+H CF C C + LD +++IYC Y R +
Sbjct: 9 KCGACEKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAH-ESEIYCKVCYGRRYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGIGYGQG 76
Score = 83 (34.3 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
KC CGK + E +V+ K +H C+ C CG L+ T+ DK G L
Sbjct: 119 KCPRCGKSVYAAE------KVMGGGKPWHKTCFRCAICGKSLESTNVTDK-----DGELY 167
Query: 522 CRACH 526
C+ C+
Sbjct: 168 CKVCY 172
Score = 78 (32.5 bits), Expect = 5.9e-09, Sum P(2) = 5.9e-09
Identities = 16/54 (29%), Positives = 22/54 (40%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY 372
C C EK + Q G +H CF C +C +AL +YC+ Y
Sbjct: 10 CGAC-EKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCY 62
>UNIPROTKB|D2SQP3 [details] [associations]
symbol:CSRP3 "Cysteine and glycine-rich protein 3"
species:9823 "Sus scrofa" [GO:0060048 "cardiac muscle contraction"
evidence=IEA] [GO:0055003 "cardiac myofibril assembly"
evidence=IEA] [GO:0042805 "actinin binding" evidence=IEA]
[GO:0035995 "detection of muscle stretch" evidence=IEA] [GO:0033365
"protein localization to organelle" evidence=IEA] [GO:0031433
"telethonin binding" evidence=IEA] [GO:0030018 "Z disc"
evidence=IEA] [GO:0008307 "structural constituent of muscle"
evidence=IEA] [GO:0006874 "cellular calcium ion homeostasis"
evidence=IEA] [GO:0003300 "cardiac muscle hypertrophy"
evidence=IEA] [GO:0002026 "regulation of the force of heart
contraction" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0030018 GO:GO:0046872
GO:GO:0008270 GO:GO:0048738 Gene3D:2.10.110.10 GO:GO:0006874
GO:GO:0002026 GeneTree:ENSGT00550000074548 KO:K09377 CTD:8048
OMA:KYGPKGI EMBL:CU929970 EMBL:FJ494917 RefSeq:NP_001165839.1
UniGene:Ssc.19310 Ensembl:ENSSSCT00000014585 GeneID:100337687
KEGG:ssc:100337687 Uniprot:D2SQP3
Length = 194
Score = 116 (45.9 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 29/81 (35%), Positives = 41/81 (50%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
+EKC CG + E ++ GK +H CFRC +C + L+ T D D ++YC Y +
Sbjct: 117 SEKCPRCGKSVYAAEKVMGG-GKPWHKTCFRCAICGKSLESTNVT-DKDGELYCKVCYAK 174
Query: 460 MFAPKCAACGKGIT-PVEGTE 479
F P G G+T VE E
Sbjct: 175 NFGPTGIGFG-GLTHQVEKKE 194
Score = 110 (43.8 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC C + +Q G+S+H CF C C + LD +++IYC Y R +
Sbjct: 9 KCGACDKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAH-ESEIYCKVCYGRRYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGIGYGQG 76
Score = 83 (34.3 bits), Expect = 8.1e-09, Sum P(2) = 8.1e-09
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
KC CGK + E +V+ K +H C+ C CG L+ T+ DK G L
Sbjct: 119 KCPRCGKSVYAAE------KVMGGGKPWHKTCFRCAICGKSLESTNVTDK-----DGELY 167
Query: 522 CRACH 526
C+ C+
Sbjct: 168 CKVCY 172
Score = 76 (31.8 bits), Expect = 6.7e-09, Sum P(2) = 6.7e-09
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY 372
C C + V A + Q G +H CF C +C +AL +YC+ Y
Sbjct: 10 CGACDKTVYHA-EEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCY 62
>UNIPROTKB|F5H3S4 [details] [associations]
symbol:LMO3 "LIM domain only protein 3" species:9606 "Homo
sapiens" [GO:0008270 "zinc ion binding" evidence=IEA] Pfam:PF00412
InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132
GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10 EMBL:AC007529
EMBL:AC007552 HGNC:HGNC:6643 IPI:IPI01011541 SMR:F5H3S4
Ensembl:ENST00000537757 Ensembl:ENST00000539534
Ensembl:ENST00000546281 Uniprot:F5H3S4
Length = 118
Score = 136 (52.9 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 35/101 (34%), Positives = 51/101 (50%)
Query: 405 CAICGHLIMEM-ILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD-NKIYCVNDYHRMFA 462
CA C I + +L+A+ K +H C +C C+ L V T+ N I C DY R+F
Sbjct: 13 CAGCNRKIKDRYLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRLFG 72
Query: 463 P--KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC 501
CAAC K + P E +R + D +H+DC+ C+ C
Sbjct: 73 VTGNCAACSK-LIPA--FEMVMR--AKDNVYHLDCFACQLC 108
Score = 85 (35.0 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 405 CAICGHLI--MEMILQAMGKSYHPGCFRCCLCNE 436
CA C LI EM+++A YH CF C LCN+
Sbjct: 77 CAACSKLIPAFEMVMRAKDNVYHLDCFACQLCNQ 110
Score = 84 (34.6 bits), Expect = 7.2e-09, Sum P(2) = 7.2e-09
Identities = 22/75 (29%), Positives = 28/75 (37%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCF--ICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
C C K+ +A+ +H +C CC C G Y + C DYL
Sbjct: 13 CAGCNRKIKDR-YLLKALDKYWHEDCLKCACCDCRLGEVGSTLYTKANLILCRRDYLRL- 70
Query: 377 FQQTAEKCAICGHLI 391
F T CA C LI
Sbjct: 71 FGVTGN-CAACSKLI 84
>UNIPROTKB|Q58CW3 [details] [associations]
symbol:LHX9 "LIM homeobox 9" species:9913 "Bos taurus"
[GO:0005634 "nucleus" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OrthoDB:EOG4G4GQK
IPI:IPI00692674 UniGene:Bt.31799 CTD:56956 EMBL:DAAA02043909
EMBL:DAAA02043910 EMBL:BT021834 IPI:IPI00903761
RefSeq:NP_001019715.1 SMR:Q58CW3 Ensembl:ENSBTAT00000017945
GeneID:515012 KEGG:bta:515012 InParanoid:Q58CW3 NextBio:20871620
Uniprot:Q58CW3
Length = 378
Score = 161 (61.7 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 52 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 111
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 112 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCSTCNKTLTTGDH---FGMKDSLVY 163
Query: 522 CRACHLSHLSRHHQSP 537
CRA H L + P
Sbjct: 164 CRA-HFETLLQGEYPP 178
>WB|WBGene00006407 [details] [associations]
symbol:lim-9 species:6239 "Caenorhabditis elegans"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0071688 "striated
muscle myosin thick filament assembly" evidence=IMP] [GO:0031430 "M
band" evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
Pfam:PF00412 InterPro:IPR001781 InterPro:IPR010442 Pfam:PF06297
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS51303 SMART:SM00132
GO:GO:0031430 GO:GO:0046872 GO:GO:0008270 GO:GO:0071688
Gene3D:2.10.110.10 EMBL:Z81068 GeneTree:ENSGT00690000101670
EMBL:Z92780 UniGene:Cel.5046 GeneID:3565712 KEGG:cel:CELE_F25H5.1
CTD:3565712 NextBio:957561 EMBL:EF443133 RefSeq:NP_001021410.2
ProteinModelPortal:G5EF39 SMR:G5EF39 PRIDE:G5EF39
EnsemblMetazoa:F25H5.1f WormBase:F25H5.1f OMA:GACSRER
Uniprot:G5EF39
Length = 656
Score = 165 (63.1 bits), Expect = 7.6e-09, P = 7.6e-09
Identities = 37/108 (34%), Positives = 54/108 (50%)
Query: 399 QQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYH 458
++ A +C+ C +I + + +H CF C CN L G FT D K YC N Y
Sbjct: 527 EKFATRCSKCKKVITAGGVTYKNEPWHRECFCCTNCNSSLAGQRFT-SKDEKPYCANCYG 585
Query: 459 RMFAPKCAACGKGITPVEGTEETVRVVSM-DKDFHVDCYMCEDCGLQL 505
+FA +C AC K IT + G + +S D+ +H DC++C C L
Sbjct: 586 DLFAKRCNACTKPITGIGGA----KFISFEDRHWHNDCFICAQCTTSL 629
Score = 152 (58.6 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 37/113 (32%), Positives = 57/113 (50%)
Query: 402 AEKCAICGHLI----MEMILQAMGKS--YHPGCFRCCLCNECLDGVPFTVDVDNKIYCVN 455
A +C C ++ M +I +G S +HP CF C C + L + + V DN+IYC
Sbjct: 283 AMECHKCSGILETNEMAVIAPKLGDSTGWHPACFTCQACEQLLVDLTYCVK-DNQIYCER 341
Query: 456 DYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDE 508
Y + P+C+AC + I E T+ +M+KD+H D + C C LT +
Sbjct: 342 HYAELHKPRCSACDELIFAGEYTK------AMNKDWHSDHFCCWQCDQTLTGQ 388
Score = 147 (56.8 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 35/124 (28%), Positives = 58/124 (46%)
Query: 404 KCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
+C+ C LI +AM K +H F C C++ L G + + D + YC+ Y +FA
Sbjct: 350 RCSACDELIFAGEYTKAMNKDWHSDHFCCWQCDQTLTGQRYIMR-DEQPYCIKCYEDVFA 408
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMC 522
+C C K I ++ + + + DK +H C++C C + L D P R+ C
Sbjct: 409 NQCDECAKPIG-IDSKDLSYK----DKHWHEHCFLCSMCKISLVDMPFGS---KNDRIFC 460
Query: 523 RACH 526
C+
Sbjct: 461 SNCY 464
Score = 121 (47.7 bits), Expect = 0.00049, P = 0.00049
Identities = 34/136 (25%), Positives = 59/136 (43%)
Query: 399 QQTAEKCAICGHLIMEMI--LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVND 456
Q A +C C + + ++ GK +H CF C C + G + ++ ++C
Sbjct: 466 QAFATRCDGCNEIFRAGMKKMEYKGKQWHDKCFCCAHCKLAI-GTKSFIPKNDDVFCGPC 524
Query: 457 YHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDC-----GLQLTDEPDK 511
Y FA +C+ C K IT G V ++ +H +C+ C +C G + T + +K
Sbjct: 525 YEEKFATRCSKCKKVIT-AGG------VTYKNEPWHRECFCCTNCNSSLAGQRFTSKDEK 577
Query: 512 R-CYPLQGRLMCRACH 526
C G L + C+
Sbjct: 578 PYCANCYGDLFAKRCN 593
>RGD|727956 [details] [associations]
symbol:Lhx9 "LIM homeobox 9" species:10116 "Rattus norvegicus"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IEA;ISO] [GO:0008584 "male gonad development"
evidence=IEA;ISO] [GO:0008585 "female gonad development"
evidence=IEA;ISO] [GO:0035262 "gonad morphogenesis"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 EMBL:AY273890
RGD:727956 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892 GO:GO:0008585
GO:GO:0046872 GO:GO:0008283 GO:GO:0043565 GO:GO:0008270
GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008584
Gene3D:2.10.110.10 GO:GO:0008045 eggNOG:NOG240987
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262
HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG HSSP:P61969
CTD:56956 EMBL:BC128722 EMBL:AF527619 IPI:IPI00208402
IPI:IPI00327074 RefSeq:NP_852032.1 UniGene:Rn.150335
ProteinModelPortal:Q80W90 SMR:Q80W90 STRING:Q80W90
Ensembl:ENSRNOT00000013873 GeneID:289048 KEGG:rno:289048
UCSC:RGD:727956 InParanoid:Q811Z4 NextBio:629139
ArrayExpress:Q80W90 Genevestigator:Q80W90 Uniprot:Q80W90
Length = 388
Score = 161 (61.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 121
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 122 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCSTCNKTLTTGDH---FGMKDSLVY 173
Query: 522 CRACHLSHLSRHHQSP 537
CRA H L + P
Sbjct: 174 CRA-HFETLLQGEYPP 188
>UNIPROTKB|Q80W90 [details] [associations]
symbol:Lhx9 "LIM/homeobox protein Lhx9" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 EMBL:AY273890 RGD:727956 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0035262 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG
HSSP:P61969 CTD:56956 EMBL:BC128722 EMBL:AF527619 IPI:IPI00208402
IPI:IPI00327074 RefSeq:NP_852032.1 UniGene:Rn.150335
ProteinModelPortal:Q80W90 SMR:Q80W90 STRING:Q80W90
Ensembl:ENSRNOT00000013873 GeneID:289048 KEGG:rno:289048
UCSC:RGD:727956 InParanoid:Q811Z4 NextBio:629139
ArrayExpress:Q80W90 Genevestigator:Q80W90 Uniprot:Q80W90
Length = 388
Score = 161 (61.7 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 62 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 121
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 122 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCSTCNKTLTTGDH---FGMKDSLVY 173
Query: 522 CRACHLSHLSRHHQSP 537
CRA H L + P
Sbjct: 174 CRA-HFETLLQGEYPP 188
>UNIPROTKB|F1MFM7 [details] [associations]
symbol:LHX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0021526 "medial
motor column neuron differentiation" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IEA] [GO:0001890 "placenta development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887 Gene3D:2.10.110.10
GO:GO:0008045 GeneTree:ENSGT00700000104177 KO:K09374 GO:GO:0021526
CTD:89884 OMA:LSFRDDQ EMBL:DAAA02043487 EMBL:DAAA02043488
EMBL:DAAA02043489 EMBL:DAAA02043490 IPI:IPI00695061
RefSeq:NP_001179714.1 UniGene:Bt.60930 Ensembl:ENSBTAT00000005216
GeneID:540797 KEGG:bta:540797 NextBio:20878839 Uniprot:F1MFM7
Length = 390
Score = 161 (61.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 393 EMYSGFQQTAEKCAICG-HLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKI 451
EM Q +CA C H++ + IL+ + + +H C +C C L F+ +
Sbjct: 18 EMLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRA--GSV 75
Query: 452 YCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDK 511
YC D+ + F KC AC +GI P + VR + D +H+ C+ C C QL +
Sbjct: 76 YCKEDFFKRFGTKCTACQQGIPPTQ----VVRK-AQDFVYHLHCFACIICNRQLATGDE- 129
Query: 512 RCYPLQ-GRLMCR 523
Y ++ GRL+C+
Sbjct: 130 -FYLMEDGRLVCK 141
>UNIPROTKB|Q969G2 [details] [associations]
symbol:LHX4 "LIM/homeobox protein Lhx4" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0001890 "placenta development" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=IEA] [GO:0009887
"organ morphogenesis" evidence=IEA] [GO:0021526 "medial motor
column neuron differentiation" evidence=IEA] [GO:0043066 "negative
regulation of apoptotic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009887
Gene3D:2.10.110.10 GO:GO:0008045 EMBL:AL139141 Orphanet:226307
Orphanet:95496 eggNOG:NOG275246 HOGENOM:HOG000231629 KO:K09374
HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0 GO:GO:0021526 EMBL:AY053457
EMBL:AF179849 EMBL:AF405430 EMBL:AF405425 EMBL:AF405426
EMBL:AF405427 EMBL:AF405428 EMBL:AF405429 EMBL:BC011759
EMBL:AB055703 EMBL:AB037683 EMBL:AF282899 EMBL:AH011598
IPI:IPI00169275 RefSeq:NP_203129.1 UniGene:Hs.658487
ProteinModelPortal:Q969G2 SMR:Q969G2 IntAct:Q969G2 STRING:Q969G2
DMDM:209572644 PRIDE:Q969G2 DNASU:89884 Ensembl:ENST00000263726
GeneID:89884 KEGG:hsa:89884 UCSC:uc001goe.2 CTD:89884
GeneCards:GC01P180199 HGNC:HGNC:21734 MIM:262700 MIM:602146
neXtProt:NX_Q969G2 Orphanet:85442 PharmGKB:PA134962876
InParanoid:Q969G2 OMA:LSFRDDQ PhylomeDB:Q969G2 GenomeRNAi:89884
NextBio:76401 ArrayExpress:Q969G2 Bgee:Q969G2 CleanEx:HS_LHX4
Genevestigator:Q969G2 GermOnline:ENSG00000121454 Uniprot:Q969G2
Length = 390
Score = 161 (61.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 393 EMYSGFQQTAEKCAICG-HLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKI 451
EM Q +CA C H++ + IL+ + + +H C +C C L F+ +
Sbjct: 18 EMLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRA--GSV 75
Query: 452 YCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDK 511
YC D+ + F KC AC +GI P + VR + D +H+ C+ C C QL +
Sbjct: 76 YCKEDFFKRFGTKCTACQQGIPPTQ----VVRK-AQDFVYHLHCFACIICNRQLATGDE- 129
Query: 512 RCYPLQ-GRLMCR 523
Y ++ GRL+C+
Sbjct: 130 -FYLMEDGRLVCK 141
>MGI|MGI:101776 [details] [associations]
symbol:Lhx4 "LIM homeobox protein 4" species:10090 "Mus
musculus" [GO:0001890 "placenta development" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005622 "intracellular" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008045 "motor neuron axon
guidance" evidence=IGI] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IMP]
[GO:0021526 "medial motor column neuron differentiation"
evidence=IGI] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:101776 GO:GO:0005634 GO:GO:0043066
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
GO:GO:0006351 GO:GO:0005622 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0009887 Gene3D:2.10.110.10 GO:GO:0008045 GO:GO:0001890
eggNOG:NOG275246 GeneTree:ENSGT00700000104177 HOGENOM:HOG000231629
KO:K09374 PDB:3MMK PDBsum:3MMK HOVERGEN:HBG006263 OrthoDB:EOG4SBDZ0
GO:GO:0021526 CTD:89884 OMA:LSFRDDQ EMBL:BC049834 EMBL:AF135415
EMBL:U89343 EMBL:S71659 IPI:IPI00134772 PIR:S46332
RefSeq:NP_034842.2 UniGene:Mm.103624 UniGene:Mm.351266
ProteinModelPortal:P53776 SMR:P53776 STRING:P53776 PRIDE:P53776
Ensembl:ENSMUST00000027740 GeneID:16872 KEGG:mmu:16872
UCSC:uc007dbn.2 InParanoid:P53776 NextBio:290842 Bgee:P53776
CleanEx:MM_LHX4 Genevestigator:P53776 GermOnline:ENSMUSG00000026468
Uniprot:P53776
Length = 390
Score = 161 (61.7 bits), Expect = 8.2e-09, P = 8.2e-09
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 393 EMYSGFQQTAEKCAICG-HLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKI 451
EM Q +CA C H++ + IL+ + + +H C +C C L F+ +
Sbjct: 18 EMLGVPMQQIPQCAGCNQHILDKFILKVLDRHWHSSCLKCADCQMQLADRCFSRA--GSV 75
Query: 452 YCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDK 511
YC D+ + F KC AC +GI P + VR + D +H+ C+ C C QL +
Sbjct: 76 YCKEDFFKRFGTKCTACQQGIPPTQ----VVRK-AQDFVYHLHCFACIICNRQLATGDE- 129
Query: 512 RCYPLQ-GRLMCR 523
Y ++ GRL+C+
Sbjct: 130 -FYLMEDGRLVCK 141
>UNIPROTKB|A0JNI8 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9913 "Bos
taurus" [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003714 "transcription corepressor
activity" evidence=ISS] [GO:0008045 "motor neuron axon guidance"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0035262
"gonad morphogenesis" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0008585 GO:GO:0046872 GO:GO:0008283 GO:GO:0043565
GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045 eggNOG:NOG240987
GeneTree:ENSGT00680000099670 GO:GO:0035262 HOGENOM:HOG000034022
HOVERGEN:HBG006262 EMBL:BT026326 EMBL:BC126704 IPI:IPI00692674
IPI:IPI00839239 UniGene:Bt.31799 ProteinModelPortal:A0JNI8
SMR:A0JNI8 Ensembl:ENSBTAT00000043591 Ensembl:ENSBTAT00000054943
InParanoid:Q0V893 OMA:AAMLFHG Uniprot:A0JNI8
Length = 397
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 131 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCSTCNKTLTTGDH---FGMKDSLVY 182
Query: 522 CRACHLSHLSRHHQSP 537
CRA H L + P
Sbjct: 183 CRA-HFETLLQGEYPP 197
>UNIPROTKB|E2R2S5 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0035262
"gonad morphogenesis" evidence=IEA] [GO:0008585 "female gonad
development" evidence=IEA] [GO:0008584 "male gonad development"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0008585 GO:GO:0046872
GO:GO:0008283 GO:GO:0043565 GO:GO:0008270 GO:GO:0003700
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 KO:K09373 GO:GO:0035262 OMA:AAMLFHG
CTD:56956 EMBL:AAEX03005042 RefSeq:XP_848787.1 SMR:E2R2S5
Ensembl:ENSCAFT00000018021 GeneID:490257 KEGG:cfa:490257
NextBio:20863313 Uniprot:E2R2S5
Length = 397
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 131 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCSTCNKTLTTGDH---FGMKDSLVY 182
Query: 522 CRACHLSHLSRHHQSP 537
CRA H L + P
Sbjct: 183 CRA-HFETLLQGEYPP 197
>UNIPROTKB|Q9NQ69 [details] [associations]
symbol:LHX9 "LIM/homeobox protein Lhx9" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008283 "cell proliferation" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0008585
"female gonad development" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008045 "motor neuron axon guidance" evidence=ISS] [GO:0003714
"transcription corepressor activity" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISS]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0003714 GO:GO:0045892
GO:GO:0008585 GO:GO:0046872 GO:GO:0008283 GO:GO:0043565
GO:GO:0008270 EMBL:CH471067 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 KO:K09373 GO:GO:0035262 HOVERGEN:HBG006262
OrthoDB:EOG4G4GQK OMA:AAMLFHG CTD:56956 EMBL:AJ277915 EMBL:AJ277916
EMBL:AJ277917 EMBL:AJ277918 EMBL:AJ277919 EMBL:AJ277920
EMBL:AJ296272 EMBL:AY273889 EMBL:AL590115 EMBL:BC131622
IPI:IPI00328729 IPI:IPI00396103 IPI:IPI00642345 IPI:IPI00642361
RefSeq:NP_001014434.1 RefSeq:NP_064589.2 UniGene:Hs.442578
UniGene:Hs.706475 PDB:2DMQ PDBsum:2DMQ ProteinModelPortal:Q9NQ69
SMR:Q9NQ69 STRING:Q9NQ69 PhosphoSite:Q9NQ69 DMDM:224471883
PRIDE:Q9NQ69 Ensembl:ENST00000337020 Ensembl:ENST00000367387
Ensembl:ENST00000367390 Ensembl:ENST00000367391 GeneID:56956
KEGG:hsa:56956 UCSC:uc001gui.1 UCSC:uc001guk.1
GeneCards:GC01P197881 HGNC:HGNC:14222 HPA:HPA009695 MIM:606066
neXtProt:NX_Q9NQ69 PharmGKB:PA30368 PhylomeDB:Q9NQ69
EvolutionaryTrace:Q9NQ69 GenomeRNAi:56956 NextBio:62575
ArrayExpress:Q9NQ69 Bgee:Q9NQ69 CleanEx:HS_LHX9
Genevestigator:Q9NQ69 GermOnline:ENSG00000143355 Uniprot:Q9NQ69
Length = 397
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 131 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCSTCNKTLTTGDH---FGMKDSLVY 182
Query: 522 CRACHLSHLSRHHQSP 537
CRA H L + P
Sbjct: 183 CRA-HFETLLQGEYPP 197
>UNIPROTKB|F1S5F5 [details] [associations]
symbol:LHX9 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0035262 "gonad
morphogenesis" evidence=IEA] [GO:0008585 "female gonad development"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008283 "cell proliferation" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10
GeneTree:ENSGT00680000099670 GO:GO:0035262 OMA:AAMLFHG
EMBL:FP325281 Ensembl:ENSSSCT00000011930 Uniprot:F1S5F5
Length = 397
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 71 CAGCGGKIADRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 131 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCSTCNKTLTTGDH---FGMKDSLVY 182
Query: 522 CRACHLSHLSRHHQSP 537
CRA H L + P
Sbjct: 183 CRA-HFETLLQGEYPP 197
>MGI|MGI:1316721 [details] [associations]
symbol:Lhx9 "LIM homeobox protein 9" species:10090 "Mus
musculus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0008584 "male gonad development" evidence=IMP]
[GO:0008585 "female gonad development" evidence=IMP] [GO:0035262
"gonad morphogenesis" evidence=IMP] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 MGI:MGI:1316721 GO:GO:0005634 GO:GO:0003714
GO:GO:0045892 GO:GO:0008585 GO:GO:0046872 GO:GO:0008283
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0008584 Gene3D:2.10.110.10 GO:GO:0008045
eggNOG:NOG240987 GeneTree:ENSGT00680000099670 KO:K09373
GO:GO:0035262 HOGENOM:HOG000034022 HOVERGEN:HBG006262 OMA:AAMLFHG
CTD:56956 EMBL:AJ243851 EMBL:AJ243852 EMBL:AJ243853 EMBL:AJ243854
EMBL:AJ243855 EMBL:AJ243856 EMBL:AJ243857 EMBL:AC154398
EMBL:BC072623 EMBL:AF134761 EMBL:AF113518 IPI:IPI00124662
IPI:IPI00227842 IPI:IPI00626920 IPI:IPI00830796
RefSeq:NP_001020736.1 RefSeq:NP_001036042.1 RefSeq:NP_034844.1
UniGene:Mm.250732 ProteinModelPortal:Q9WUH2 SMR:Q9WUH2
IntAct:Q9WUH2 MINT:MINT-1340747 STRING:Q9WUH2 PRIDE:Q9WUH2
Ensembl:ENSMUST00000019374 Ensembl:ENSMUST00000046870
Ensembl:ENSMUST00000093486 Ensembl:ENSMUST00000112026
Ensembl:ENSMUST00000112030 GeneID:16876 KEGG:mmu:16876
UCSC:uc007cvr.1 UCSC:uc007cvs.1 UCSC:uc007cvu.1 ChiTaRS:LHX9
NextBio:290864 Bgee:Q9WUH2 CleanEx:MM_LHX9 Genevestigator:Q9WUH2
GermOnline:ENSMUSG00000019230 Uniprot:Q9WUH2
Length = 397
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 43/136 (31%), Positives = 63/136 (46%)
Query: 405 CAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA- 462
CA CG I + L A+ K +H C +CC C L+ D IYC DY+R F+
Sbjct: 71 CAGCGGKISDRYYLLAVDKQWHLRCLKCCECKLALESELTCFAKDGSIYCKEDYYRRFSV 130
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLM- 521
+CA C GI+ +E +R + D +H+ C+ C C LT + ++ L+
Sbjct: 131 QRCARCHLGIS---ASEMVMR--ARDSVYHLSCFTCSTCNKTLTTGDH---FGMKDSLVY 182
Query: 522 CRACHLSHLSRHHQSP 537
CRA H L + P
Sbjct: 183 CRA-HFETLLQGEYPP 197
>ZFIN|ZDB-GENE-980526-131 [details] [associations]
symbol:lhx3 "LIM homeobox 3" species:7955 "Danio
rerio" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 ZFIN:ZDB-GENE-980526-131 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 GO:GO:0003700 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
eggNOG:NOG275246 KO:K09374 HOVERGEN:HBG006263 CTD:8022 EMBL:U34590
IPI:IPI00486105 RefSeq:NP_571283.1 UniGene:Dr.570
ProteinModelPortal:Q90421 SMR:Q90421 STRING:Q90421 GeneID:30455
KEGG:dre:30455 NextBio:20806850 Uniprot:Q90421
Length = 398
Score = 161 (61.7 bits), Expect = 8.5e-09, P = 8.5e-09
Identities = 41/131 (31%), Positives = 63/131 (48%)
Query: 395 YSGFQQTAEKCAICG-HLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
YS Q CA C H++ IL+ + + +H C +C C L F+ + +YC
Sbjct: 19 YSS-SQDIPVCAGCNQHIVDRFILKVLDRHWHSKCLKCSDCQSQLADKCFSRG--DSVYC 75
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRC 513
+D+ + F KCAAC +GI P + VR + D +H+ C+ C C QL D+
Sbjct: 76 KDDFFKRFGTKCAACQQGIPPTQ----VVRR-AQDFVYHLHCFACIVCKRQLATG-DEYY 129
Query: 514 YPLQGRLMCRA 524
RL+C+A
Sbjct: 130 LMEDSRLVCKA 140
>UNIPROTKB|E1BM60 [details] [associations]
symbol:ISL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA] [GO:0031290
"retinal ganglion cell axon guidance" evidence=IEA] [GO:0021524
"visceral motor neuron differentiation" evidence=IEA] [GO:0021520
"spinal cord motor neuron cell fate specification" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GeneTree:ENSGT00700000104050
GO:GO:0031290 GO:GO:0021520 GO:GO:0021524 OMA:RHDSAVQ
EMBL:DAAA02052446 IPI:IPI00701951 UniGene:Bt.34422
Ensembl:ENSBTAT00000022147 NextBio:20928153 Uniprot:E1BM60
Length = 359
Score = 160 (61.4 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 405 CAICGHLIMEMILQAMGKS--YHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
C CG I + + + +H C +C C++ LD D K YC DY R+F
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMC 522
KCA C G + ++ +R + D +H++C+ C C QL P + L+C
Sbjct: 87 IKCAKCQVGFS---SSDLVMR--ARDSVYHIECFRCSVCSRQLL--PGDEFSLREHELLC 139
Query: 523 RACH 526
RA H
Sbjct: 140 RADH 143
>UNIPROTKB|Q96A47 [details] [associations]
symbol:ISL2 "Insulin gene enhancer protein ISL-2"
species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0021520 "spinal cord motor neuron cell
fate specification" evidence=IEA] [GO:0021524 "visceral motor
neuron differentiation" evidence=IEA] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IEA] [GO:0045665 "negative regulation
of neuron differentiation" evidence=IEA] [GO:0048935 "peripheral
nervous system neuron development" evidence=TAS] [GO:0003677 "DNA
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=IC]
[GO:0048666 "neuron development" evidence=TAS] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
GO:GO:0005634 GO:GO:0046872 GO:GO:0003677 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 EMBL:CH471136 GO:GO:0031290
GO:GO:0048935 eggNOG:COG5576 GO:GO:0021520 HOVERGEN:HBG004671
KO:K09370 HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR GO:GO:0021524
OMA:RHDSAVQ EMBL:AK001022 EMBL:BC011967 EMBL:BC012136
IPI:IPI00059240 RefSeq:NP_665804.1 UniGene:Hs.444677
ProteinModelPortal:Q96A47 SMR:Q96A47 STRING:Q96A47
PhosphoSite:Q96A47 DMDM:20978495 PRIDE:Q96A47 DNASU:64843
Ensembl:ENST00000290759 GeneID:64843 KEGG:hsa:64843 UCSC:uc002bbw.1
CTD:64843 GeneCards:GC15P076629 HGNC:HGNC:18524 MIM:609481
neXtProt:NX_Q96A47 PharmGKB:PA38566 InParanoid:Q96A47
PhylomeDB:Q96A47 GenomeRNAi:64843 NextBio:66950 Bgee:Q96A47
CleanEx:HS_ISL2 Genevestigator:Q96A47 GermOnline:ENSG00000159556
Uniprot:Q96A47
Length = 359
Score = 160 (61.4 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 405 CAICGHLIMEMILQAMGKS--YHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
C CG I + + + +H C +C C++ LD D K YC DY R+F
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMC 522
KCA C G + ++ +R + D +H++C+ C C QL P + L+C
Sbjct: 87 IKCAKCQVGFS---SSDLVMR--ARDSVYHIECFRCSVCSRQLL--PGDEFSLREHELLC 139
Query: 523 RACH 526
RA H
Sbjct: 140 RADH 143
>MGI|MGI:109156 [details] [associations]
symbol:Isl2 "insulin related protein 2 (islet 2)"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0005622
"intracellular" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IGI] [GO:0021524 "visceral motor neuron differentiation"
evidence=IGI;IMP] [GO:0031290 "retinal ganglion cell axon guidance"
evidence=IMP] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045665 "negative regulation of neuron
differentiation" evidence=IGI;IMP] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048663 "neuron fate commitment"
evidence=IGI;IMP] Pfam:PF00412 InterPro:IPR001356
InterPro:IPR001781 InterPro:IPR009057 InterPro:IPR017970
Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS50071 SMART:SM00132 SMART:SM00389 MGI:MGI:109156
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 EMBL:CH466522 GO:GO:0005622
Gene3D:1.10.10.60 SUPFAM:SSF46689 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104050 GO:GO:0031290 eggNOG:COG5576
GO:GO:0021520 HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304
OrthoDB:EOG4G4GQR GO:GO:0021524 OMA:RHDSAVQ CTD:64843 EMBL:AK013964
EMBL:AC116699 IPI:IPI00110854 RefSeq:NP_081673.2 UniGene:Mm.273996
PDB:3MMK PDBsum:3MMK ProteinModelPortal:Q9CXV0 STRING:Q9CXV0
PhosphoSite:Q9CXV0 PRIDE:Q9CXV0 DNASU:104360
Ensembl:ENSMUST00000034869 GeneID:104360 KEGG:mmu:104360
UCSC:uc009psm.1 InParanoid:Q9CXV0 NextBio:356992 CleanEx:MM_ISL2
Genevestigator:Q9CXV0 GermOnline:ENSMUSG00000032318 Uniprot:Q9CXV0
Length = 359
Score = 160 (61.4 bits), Expect = 8.7e-09, P = 8.7e-09
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 405 CAICGHLIMEMILQAMGKS--YHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
C CG I + + + +H C +C C++ LD D K YC DY R+F
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMC 522
KCA C G + ++ +R + D +H++C+ C C QL P + L+C
Sbjct: 87 IKCAQCQVGFS---SSDLVMR--ARDSVYHIECFRCSVCSRQLL--PGDEFSLREHELLC 139
Query: 523 RACH 526
RA H
Sbjct: 140 RADH 143
>UNIPROTKB|F5H0C2 [details] [associations]
symbol:LDB3 "LIM domain-binding protein 3" species:9606
"Homo sapiens" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00595 Pfam:PF00412 InterPro:IPR001478 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50106 SMART:SM00132
SMART:SM00228 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
SUPFAM:SSF50156 EMBL:AC067750 HGNC:HGNC:15710 ChiTaRS:LDB3
InterPro:IPR006643 SMART:SM00735 IPI:IPI00909356
ProteinModelPortal:F5H0C2 SMR:F5H0C2 Ensembl:ENST00000539402
ArrayExpress:F5H0C2 Bgee:F5H0C2 Uniprot:F5H0C2
Length = 648
Score = 166 (63.5 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 45/180 (25%), Positives = 83/180 (46%)
Query: 346 ICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQT-AEKCAICGHLIMEMYSGFQQT-AE 403
+C C +RG F GR + E++ + + + A+ C + + ++Q A
Sbjct: 471 LCGHCNNVIRGP-FLVAMGRSWHPEEFTCAYCKTSLADVCFVEEQNNVYCERCYEQFFAP 529
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAP 463
CA C IM ++ A+ +++H CF C C + F ++ D + YC DY +F+
Sbjct: 530 LCAKCNTKIMGEVMHALRQTWHTTCFVCAACKKPFGNSLFHME-DGEPYCEKDYINLFST 588
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCR 523
KC C PVE ++ + ++ +H C++C C + L +P Y + R +C+
Sbjct: 589 KCHGCD---FPVEAGDKFIE--ALGHTWHDTCFICAVCHVNLEGQP---FYSKKDRPLCK 640
Score = 123 (48.4 bits), Expect = 0.00043, Sum P(2) = 0.00043
Identities = 28/101 (27%), Positives = 45/101 (44%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C K+ G + A+ +HT CF+C +C + F+ G YCE+DY+ + F
Sbjct: 530 LCAKCNTKIMG--EVMHALRQTWHTTCFVCAACKKPFGNSLFHMEDGEPYCEKDYI-NLF 586
Query: 378 QQTAEKCAI---CGHLIMEMYSG-FQQTAEKCAICGHLIME 414
C G +E + T CA+C H+ +E
Sbjct: 587 STKCHGCDFPVEAGDKFIEALGHTWHDTCFICAVC-HVNLE 626
Score = 43 (20.2 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 12/30 (40%), Positives = 16/30 (53%)
Query: 168 VPQGLKYIRDYPPYEAPPVYEN-IQELNKP 196
+P G I+D A PVY+ I+ NKP
Sbjct: 227 LPGGSLPIKDLAVDSASPVYQAVIKSQNKP 256
Score = 43 (20.2 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 13/54 (24%), Positives = 21/54 (38%)
Query: 180 PYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKA 233
P++ P + L P P P+ G + T P +SR + +S A
Sbjct: 104 PHQKDPALDTNGSL-VAPSPSPEARASPGTPGTPELRPTFSPAFSRPSAFSSLA 156
Score = 43 (20.2 bits), Expect = 8.7e-09, Sum P(2) = 8.7e-09
Identities = 20/66 (30%), Positives = 27/66 (40%)
Query: 178 YPPYEAPPVYENIQELNKPPKPGPQVPVFGGEHRQMAIALTSPPVYSRANTVTSKAVPVK 237
Y P AP Y N P P V GG A + PP + ++ + K P K
Sbjct: 374 YTPSPAP-AYTPSPAPNY--NPAPSVAYSGGP----AEPASRPP-WVTDDSFSQKFAPGK 425
Query: 238 TATSLS 243
+ TS+S
Sbjct: 426 STTSIS 431
Score = 37 (18.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 10/35 (28%), Positives = 13/35 (37%)
Query: 169 PQGLKYIRDYPPYEAPPVYENIQELNKPPKPGPQV 203
PQ Y AP + + E P P P+V
Sbjct: 300 PQASSYSPAVAASSAPATHTSYSEGPAAPAPKPRV 334
Score = 37 (18.1 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 9/37 (24%), Positives = 16/37 (43%)
Query: 211 RQMAIALTSPPVYSRANTVTSKAVPVKTATSLSVTPN 247
R + I+ T+PPV + + + P V P+
Sbjct: 85 RPIPISTTAPPVQTPLPVIPHQKDPALDTNGSLVAPS 121
>RGD|621849 [details] [associations]
symbol:Isl2 "ISL LIM homeobox 2" species:10116 "Rattus
norvegicus" [GO:0003674 "molecular_function" evidence=ND]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005622 "intracellular" evidence=ISO] [GO:0005634
"nucleus" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021520 "spinal cord motor neuron cell fate specification"
evidence=IEA;ISO] [GO:0021524 "visceral motor neuron
differentiation" evidence=IEA;ISO] [GO:0031290 "retinal ganglion
cell axon guidance" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045665 "negative
regulation of neuron differentiation" evidence=IEA;ISO] [GO:0048663
"neuron fate commitment" evidence=ISO] Pfam:PF00412
InterPro:IPR001356 InterPro:IPR001781 InterPro:IPR009057
InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027 PROSITE:PS00478
PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132 SMART:SM00389
RGD:621849 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60 SUPFAM:SSF46689
Gene3D:2.10.110.10 GO:GO:0031290 eggNOG:COG5576 GO:GO:0021520
HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304 OrthoDB:EOG4G4GQR
GO:GO:0021524 CTD:64843 EMBL:L35571 IPI:IPI00198543 PIR:A55198
RefSeq:NP_065204.1 UniGene:Rn.10026 PDB:1BW5 PDBsum:1BW5
ProteinModelPortal:P50480 SMR:P50480 STRING:P50480 PRIDE:P50480
GeneID:57233 KEGG:rno:57233 UCSC:RGD:621849 InParanoid:P50480
EvolutionaryTrace:P50480 NextBio:611298 ArrayExpress:P50480
Genevestigator:P50480 GermOnline:ENSRNOG00000015336 Uniprot:P50480
Length = 360
Score = 160 (61.4 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 405 CAICGHLIMEMILQAMGKS--YHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
C CG I + + + +H C +C C++ LD D K YC DY R+F
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMC 522
KCA C G + ++ +R + D +H++C+ C C QL P + L+C
Sbjct: 87 IKCAQCQVGFS---SSDLVMR--ARDSVYHIECFRCSVCSRQLL--PGDEFSLREHELLC 139
Query: 523 RACH 526
RA H
Sbjct: 140 RADH 143
>UNIPROTKB|P50480 [details] [associations]
symbol:Isl2 "Insulin gene enhancer protein ISL-2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001356 InterPro:IPR001781
InterPro:IPR009057 InterPro:IPR017970 Pfam:PF00046 PROSITE:PS00027
PROSITE:PS00478 PROSITE:PS50023 PROSITE:PS50071 SMART:SM00132
SMART:SM00389 RGD:621849 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 GO:GO:0045665 GO:GO:0003700 Gene3D:1.10.10.60
SUPFAM:SSF46689 Gene3D:2.10.110.10 GO:GO:0031290 eggNOG:COG5576
GO:GO:0021520 HOVERGEN:HBG004671 KO:K09370 HOGENOM:HOG000236304
OrthoDB:EOG4G4GQR GO:GO:0021524 CTD:64843 EMBL:L35571
IPI:IPI00198543 PIR:A55198 RefSeq:NP_065204.1 UniGene:Rn.10026
PDB:1BW5 PDBsum:1BW5 ProteinModelPortal:P50480 SMR:P50480
STRING:P50480 PRIDE:P50480 GeneID:57233 KEGG:rno:57233
UCSC:RGD:621849 InParanoid:P50480 EvolutionaryTrace:P50480
NextBio:611298 ArrayExpress:P50480 Genevestigator:P50480
GermOnline:ENSRNOG00000015336 Uniprot:P50480
Length = 360
Score = 160 (61.4 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 37/124 (29%), Positives = 56/124 (45%)
Query: 405 CAICGHLIMEMILQAMGKS--YHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
C CG I + + + +H C +C C++ LD D K YC DY R+F
Sbjct: 27 CVGCGSQIHDQFILRVSPDLEWHAACLKCAECSQYLDETCTCFVRDGKTYCKRDYVRLFG 86
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMC 522
KCA C G + ++ +R + D +H++C+ C C QL P + L+C
Sbjct: 87 IKCAQCQVGFS---SSDLVMR--ARDSVYHIECFRCSVCSRQLL--PGDEFSLREHELLC 139
Query: 523 RACH 526
RA H
Sbjct: 140 RADH 143
>UNIPROTKB|J9PAF1 [details] [associations]
symbol:ABLIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 EMBL:AAEX03002409 EMBL:AAEX03002410
EMBL:AAEX03002411 Ensembl:ENSCAFT00000046666 Uniprot:J9PAF1
Length = 612
Score = 164 (62.8 bits), Expect = 8.8e-09, P = 8.8e-09
Identities = 54/190 (28%), Positives = 79/190 (41%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G + +KC++
Sbjct: 92 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKECMCQKCSLPKT 139
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
Y Q C CG I L A+ K +H GCF+C C + LD + D
Sbjct: 140 AGSSAY--LSQGLWSCGGCGAEIKNGQSLVALDKHWHLGCFKCETCGKQLDAE--YISKD 195
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDE 508
YC DYH F +C C K IT G + + +K +H C +C CG +
Sbjct: 196 GLPYCEADYHTKFGIRCDGCEKYIT---GHV----LEAGEKHYHPLCALCVRCGRMFAE- 247
Query: 509 PDKRCYPLQG 518
+ Y LQG
Sbjct: 248 -GEEMY-LQG 255
Score = 140 (54.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
TA C CG++ +L+ K +H CF C C L F V I C DY R+
Sbjct: 20 TAILCNTCGNVCKGEVLRVQNKYFHIKCFVCKACGCDLAEGGFFVRQGEYI-CTLDYQRL 78
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR- 519
+ +C +C + I EG E V ++ K +H DC++C C L P R G+
Sbjct: 79 YGTRCFSCDQFI---EG--EVVS--ALGKTYHPDCFVCAVCRLPFP--PGDRV-TFNGKE 128
Query: 520 LMCRACHL 527
MC+ C L
Sbjct: 129 CMCQKCSL 136
Score = 131 (51.2 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFTVDVDNKIYCVNDYHRM 460
+C C I ++ A+GK+YHP CF C +C D V F + C
Sbjct: 82 RCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFN---GKECMCQKCSLPK 138
Query: 461 FAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLTDE 508
A A +G+ G ++ +V++DK +H+ C+ CE CG QL E
Sbjct: 139 TAGSSAYLSQGLWSCGGCGAEIKNGQSLVALDKHWHLGCFKCETCGKQLDAE 190
>UNIPROTKB|J9NWS9 [details] [associations]
symbol:ABLIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 GO:GO:0046872 GO:GO:0008270 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 EMBL:AAEX03002409 EMBL:AAEX03002410
EMBL:AAEX03002411 Ensembl:ENSCAFT00000045774 Uniprot:J9NWS9
Length = 617
Score = 164 (62.8 bits), Expect = 8.9e-09, P = 8.9e-09
Identities = 54/190 (28%), Positives = 79/190 (41%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G + +KC++
Sbjct: 97 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKECMCQKCSLPKT 144
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
Y Q C CG I L A+ K +H GCF+C C + LD + D
Sbjct: 145 AGSSAY--LSQGLWSCGGCGAEIKNGQSLVALDKHWHLGCFKCETCGKQLDAE--YISKD 200
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDE 508
YC DYH F +C C K IT G + + +K +H C +C CG +
Sbjct: 201 GLPYCEADYHTKFGIRCDGCEKYIT---GHV----LEAGEKHYHPLCALCVRCGRMFAE- 252
Query: 509 PDKRCYPLQG 518
+ Y LQG
Sbjct: 253 -GEEMY-LQG 260
Score = 140 (54.3 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
TA C CG++ +L+ K +H CF C C L F V I C DY R+
Sbjct: 25 TAILCNTCGNVCKGEVLRVQNKYFHIKCFVCKACGCDLAEGGFFVRQGEYI-CTLDYQRL 83
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR- 519
+ +C +C + I EG E V ++ K +H DC++C C L P R G+
Sbjct: 84 YGTRCFSCDQFI---EG--EVVS--ALGKTYHPDCFVCAVCRLPFP--PGDRV-TFNGKE 133
Query: 520 LMCRACHL 527
MC+ C L
Sbjct: 134 CMCQKCSL 141
Score = 131 (51.2 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFTVDVDNKIYCVNDYHRM 460
+C C I ++ A+GK+YHP CF C +C D V F + C
Sbjct: 87 RCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFN---GKECMCQKCSLPK 143
Query: 461 FAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLTDE 508
A A +G+ G ++ +V++DK +H+ C+ CE CG QL E
Sbjct: 144 TAGSSAYLSQGLWSCGGCGAEIKNGQSLVALDKHWHLGCFKCETCGKQLDAE 195
>UNIPROTKB|Q5FVB2 [details] [associations]
symbol:lmo4.1 "LIM domain transcription factor LMO4.1"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0003712
"transcription cofactor activity" evidence=ISS] [GO:0005575
"cellular_component" evidence=ND] [GO:0007498 "mesoderm
development" evidence=ISS] [GO:0045665 "negative regulation of
neuron differentiation" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 GO:GO:0007498 GO:GO:0046872
GO:GO:0008270 GO:GO:0045944 GO:GO:0045665 GO:GO:0006351
Gene3D:2.10.110.10 GO:GO:0003712 GO:GO:0007369
GeneTree:ENSGT00700000104177 HSSP:P61969 HOGENOM:HOG000232175
HOVERGEN:HBG054231 EMBL:BC090104 RefSeq:NP_001015822.1
UniGene:Str.52903 ProteinModelPortal:Q5FVB2 SMR:Q5FVB2
Ensembl:ENSXETT00000050669 GeneID:548539 KEGG:xtr:548539 CTD:548539
Xenbase:XB-GENE-479327 eggNOG:NOG314117 InParanoid:Q5FVB2
OMA:DRYWHTR OrthoDB:EOG4XKV82 Bgee:Q5FVB2 Uniprot:Q5FVB2
Length = 167
Score = 140 (54.3 bits), Expect = 9.0e-09, P = 9.0e-09
Identities = 39/137 (28%), Positives = 63/137 (45%)
Query: 405 CAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDN-KIYCVNDYHRMFA 462
CA CG I + +L +M + +H C +C C L + + + I C NDY R+F
Sbjct: 24 CAGCGGKIADRFLLYSMERYWHTRCLKCSCCQAQLGEIGTSCYTKSGMILCRNDYIRLFG 83
Query: 463 PK--CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRL 520
C+ACG+ I P +E +R + +H+ C+ C C +L P R + + G +
Sbjct: 84 SSGACSACGQSI-PA--SEMVMR--AQGSVYHLKCFTCATCRNRLV--PGDRFHYVNGAI 136
Query: 521 MCRACHLSHLSRHHQSP 537
C + L H +P
Sbjct: 137 FCEHDRPTGLLSGHLNP 153
Score = 130 (50.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSC-GRALRGKAFYNVHGRVYCEED 371
G C CG+ + + +A G++YH CF C +C R + G F+ V+G ++CE D
Sbjct: 86 GACSACGQSIPASEMVMRAQGSVYHLKCFTCATCRNRLVPGDRFHYVNGAIFCEHD 141
>UNIPROTKB|F1PCZ6 [details] [associations]
symbol:ABLIM2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0007010 "cytoskeleton organization" evidence=IEA] [GO:0003779
"actin binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153 GO:GO:0007010
GO:GO:0046872 GO:GO:0008270 Gene3D:1.10.950.10 Gene3D:2.10.110.10
SUPFAM:SSF47050 GeneTree:ENSGT00700000104021 OMA:FRHHYIP
EMBL:AAEX03002409 EMBL:AAEX03002410 EMBL:AAEX03002411
Ensembl:ENSCAFT00000023075 Uniprot:F1PCZ6
Length = 643
Score = 164 (62.8 bits), Expect = 9.5e-09, P = 9.5e-09
Identities = 54/190 (28%), Positives = 79/190 (41%)
Query: 330 GQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQQTAEKCAICGH 389
G+ A+G YH +CF+C C + + RV ++G + +KC++
Sbjct: 90 GEVVSALGKTYHPDCFVCAVC------RLPFPPGDRV------TFNGKECMCQKCSLPKT 137
Query: 390 LIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVD 448
Y Q C CG I L A+ K +H GCF+C C + LD + D
Sbjct: 138 AGSSAY--LSQGLWSCGGCGAEIKNGQSLVALDKHWHLGCFKCETCGKQLDAE--YISKD 193
Query: 449 NKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDE 508
YC DYH F +C C K IT G + + +K +H C +C CG +
Sbjct: 194 GLPYCEADYHTKFGIRCDGCEKYIT---GHV----LEAGEKHYHPLCALCVRCGRMFAE- 245
Query: 509 PDKRCYPLQG 518
+ Y LQG
Sbjct: 246 -GEEMY-LQG 253
Score = 140 (54.3 bits), Expect = 4.1e-06, P = 4.1e-06
Identities = 41/128 (32%), Positives = 58/128 (45%)
Query: 401 TAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
TA C CG++ +L+ K +H CF C C L F V I C DY R+
Sbjct: 18 TAILCNTCGNVCKGEVLRVQNKYFHIKCFVCKACGCDLAEGGFFVRQGEYI-CTLDYQRL 76
Query: 461 FAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGR- 519
+ +C +C + I EG E V ++ K +H DC++C C L P R G+
Sbjct: 77 YGTRCFSCDQFI---EG--EVVS--ALGKTYHPDCFVCAVCRLPFP--PGDRV-TFNGKE 126
Query: 520 LMCRACHL 527
MC+ C L
Sbjct: 127 CMCQKCSL 134
Score = 131 (51.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 33/112 (29%), Positives = 50/112 (44%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFTVDVDNKIYCVNDYHRM 460
+C C I ++ A+GK+YHP CF C +C D V F + C
Sbjct: 80 RCFSCDQFIEGEVVSALGKTYHPDCFVCAVCRLPFPPGDRVTFN---GKECMCQKCSLPK 136
Query: 461 FAPKCAACGKGITPVEGTEETVR----VVSMDKDFHVDCYMCEDCGLQLTDE 508
A A +G+ G ++ +V++DK +H+ C+ CE CG QL E
Sbjct: 137 TAGSSAYLSQGLWSCGGCGAEIKNGQSLVALDKHWHLGCFKCETCGKQLDAE 188
>UNIPROTKB|E1BV80 [details] [associations]
symbol:LIMS2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005925
"focal adhesion" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
PROSITE:PS00478 PROSITE:PS50023 SMART:SM00132 GO:GO:0046872
GO:GO:0008270 GO:GO:0005925 Gene3D:2.10.110.10
GeneTree:ENSGT00690000101670 InterPro:IPR017351 PIRSF:PIRSF038003
CTD:55679 OMA:ECFRCEL EMBL:AADN02024426 IPI:IPI00599911
RefSeq:XP_422574.2 UniGene:Gga.13372 Ensembl:ENSGALT00000003103
GeneID:424752 KEGG:gga:424752 NextBio:20827038 Uniprot:E1BV80
Length = 341
Score = 159 (61.0 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 38/115 (33%), Positives = 61/115 (53%)
Query: 414 EMILQAMGKSYHPGCFRCCLC-NECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGI 472
E I+ + G+ YH CF C C + DG+ + + + + YC +D+ +FAP C CG+ I
Sbjct: 26 ERIVNSNGELYHENCFVCAQCFRQFPDGLFY--EFEGRKYCEHDFQMLFAPCCGECGEFI 83
Query: 473 TPVEGTEETVRVV-SMDKDFHVDCYMCEDCGLQLTDEPDKRCYPLQGRLMCRACH 526
G RV+ +M+ ++H +C+ CE C + L D + GR +CR CH
Sbjct: 84 I---G-----RVIKAMNNNWHPECFRCELCDVALADLGFVKN---AGRHLCRPCH 127
Score = 150 (57.9 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 41/167 (24%), Positives = 66/167 (39%)
Query: 318 ICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGF 377
+C C + A + + G LYH NCF+C C R FY GR YCE D+ F
Sbjct: 14 VCERCQTRFDPAERIVNSNGELYHENCFVCAQCFRQFPDGLFYEFEGRKYCEHDFQML-F 72
Query: 378 QQTAEKCA--ICGHLIMEMYSGFQQTAEKCAICGHLIMEM-ILQAMGKSYHPGCFRC--- 431
+C I G +I M + + +C +C + ++ ++ G+ C
Sbjct: 73 APCCGECGEFIIGRVIKAMNNNWHPECFRCELCDVALADLGFVKNAGRHLCRPCHNREKA 132
Query: 432 -----CLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGIT 473
+C +C +D ++ + YH C CGK +T
Sbjct: 133 KGLGKYICQKC----HLIIDEQPLMFRNDSYHPDHF-NCTHCGKELT 174
Score = 131 (51.2 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 56/198 (28%), Positives = 84/198 (42%)
Query: 347 CCS-CGRALRGKAFY----NVHGRVY-CEE-DYLYS--GFQQTAEK--CAICGHLIMEMY 395
CC CG + G+ N H + CE D + GF + A + C C + E
Sbjct: 75 CCGECGEFIIGRVIKAMNNNWHPECFRCELCDVALADLGFVKNAGRHLCRPCHN--REKA 132
Query: 396 SGF-QQTAEKCAICGHLIM-EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYC 453
G + +KC HLI+ E L SYHP F C C + L ++ ++YC
Sbjct: 133 KGLGKYICQKC----HLIIDEQPLMFRNDSYHPDHFNCTHCGKELTAE--ARELKGELYC 186
Query: 454 VNDYHRMFAPKCAACGKGITPVEGTEETVRVVS-MDKDFHVDCYMCEDCGLQLTDEPDKR 512
+ + +M P C AC + P+EG RVV+ + K +HV+ ++C C R
Sbjct: 187 LPCHDKMGIPICGACRR---PIEG-----RVVNALGKQWHVEHFVCAKCEKPFLGH---R 235
Query: 513 CYPLQGRLMCRACHLSHL 530
Y +G C H + L
Sbjct: 236 HYEKKGLAYCET-HYNQL 252
>RGD|71092 [details] [associations]
symbol:Csrp3 "cysteine and glycine-rich protein 3 (cardiac LIM
protein)" species:10116 "Rattus norvegicus" [GO:0001974 "blood
vessel remodeling" evidence=IEP] [GO:0002026 "regulation of the
force of heart contraction" evidence=IEA;ISO] [GO:0003300 "cardiac
muscle hypertrophy" evidence=IEA;ISO] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006874 "cellular calcium ion
homeostasis" evidence=IEA;ISO] [GO:0007517 "muscle organ
development" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008307 "structural constituent of muscle"
evidence=IEA;ISO] [GO:0030018 "Z disc" evidence=IEA;ISO;IDA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031433
"telethonin binding" evidence=IEA;ISO] [GO:0033365 "protein
localization to organelle" evidence=IEA;ISO] [GO:0035995 "detection
of muscle stretch" evidence=IEA;ISO] [GO:0042805 "actinin binding"
evidence=IEA;ISO] [GO:0048738 "cardiac muscle tissue development"
evidence=ISO] [GO:0055003 "cardiac myofibril assembly"
evidence=IEA;ISO] [GO:0060048 "cardiac muscle contraction"
evidence=IEA;ISO] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 RGD:71092 GO:GO:0005634 GO:GO:0030154
GO:GO:0030018 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0048738 Gene3D:2.10.110.10 GO:GO:0007517 GO:GO:0001974
GO:GO:0006874 GO:GO:0002026 HOVERGEN:HBG051143 eggNOG:NOG281414
KO:K09377 HOGENOM:HOG000111233 CTD:8048 OrthoDB:EOG470TJ6
EMBL:X81193 IPI:IPI00198497 PIR:A55099 RefSeq:NP_476485.1
UniGene:Rn.11345 ProteinModelPortal:P50463 SMR:P50463 STRING:P50463
PhosphoSite:P50463 PRIDE:P50463 GeneID:117505 KEGG:rno:117505
UCSC:RGD:71092 InParanoid:P50463 NextBio:620251
Genevestigator:P50463 GermOnline:ENSRNOG00000014327 Uniprot:P50463
Length = 194
Score = 112 (44.5 bits), Expect = 0.00040, P = 0.00040
Identities = 38/140 (27%), Positives = 59/140 (42%)
Query: 344 CFICCSCGRALRGKAFYNVHGRVYCEE-DYLYSGFQQTAEKCAICGHLIMEMYSGFQQTA 402
C +C +G F G + + ++L FQQ+ + +S +
Sbjct: 58 CKVCYGRKYGPKGIGFGQGAGCLSTDTGEHLGLQFQQSPKPARAATTSNPSKFSAKFGES 117
Query: 403 EKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
EKC CG + E ++ GK +H CF C +C + L+ T D D ++YC Y +
Sbjct: 118 EKCPRCGKSVYAAEKVMGG-GKPWHKTCFPCAICGKSLESTNVT-DKDGELYCKVCYAKN 175
Query: 461 FAPKCAACGKGIT-PVEGTE 479
F P G G+T VE E
Sbjct: 176 FGPTGIGFG-GLTHQVEKKE 194
Score = 110 (43.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC C + +Q G+S+H CF C C + LD +++IYC Y R +
Sbjct: 9 KCGACDKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAH-ESEIYCKVCYGRKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGIGFGQG 76
Score = 82 (33.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
KC CGK + E +V+ K +H C+ C CG L+ T+ DK G L
Sbjct: 119 KCPRCGKSVYAAE------KVMGGGKPWHKTCFPCAICGKSLESTNVTDK-----DGELY 167
Query: 522 CRACH 526
C+ C+
Sbjct: 168 CKVCY 172
Score = 76 (31.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY 372
C C + V A + Q G +H CF C +C +AL +YC+ Y
Sbjct: 10 CGACDKTVYHA-EEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCY 62
>UNIPROTKB|P50463 [details] [associations]
symbol:Csrp3 "Cysteine and glycine-rich protein 3"
species:10116 "Rattus norvegicus" [GO:0008270 "zinc ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 RGD:71092 GO:GO:0005634 GO:GO:0030154
GO:GO:0030018 GO:GO:0005856 GO:GO:0046872 GO:GO:0008270
GO:GO:0048738 Gene3D:2.10.110.10 GO:GO:0007517 GO:GO:0001974
GO:GO:0006874 GO:GO:0002026 HOVERGEN:HBG051143 eggNOG:NOG281414
KO:K09377 HOGENOM:HOG000111233 CTD:8048 OrthoDB:EOG470TJ6
EMBL:X81193 IPI:IPI00198497 PIR:A55099 RefSeq:NP_476485.1
UniGene:Rn.11345 ProteinModelPortal:P50463 SMR:P50463 STRING:P50463
PhosphoSite:P50463 PRIDE:P50463 GeneID:117505 KEGG:rno:117505
UCSC:RGD:71092 InParanoid:P50463 NextBio:620251
Genevestigator:P50463 GermOnline:ENSRNOG00000014327 Uniprot:P50463
Length = 194
Score = 112 (44.5 bits), Expect = 0.00040, P = 0.00040
Identities = 38/140 (27%), Positives = 59/140 (42%)
Query: 344 CFICCSCGRALRGKAFYNVHGRVYCEE-DYLYSGFQQTAEKCAICGHLIMEMYSGFQQTA 402
C +C +G F G + + ++L FQQ+ + +S +
Sbjct: 58 CKVCYGRKYGPKGIGFGQGAGCLSTDTGEHLGLQFQQSPKPARAATTSNPSKFSAKFGES 117
Query: 403 EKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRM 460
EKC CG + E ++ GK +H CF C +C + L+ T D D ++YC Y +
Sbjct: 118 EKCPRCGKSVYAAEKVMGG-GKPWHKTCFPCAICGKSLESTNVT-DKDGELYCKVCYAKN 175
Query: 461 FAPKCAACGKGIT-PVEGTE 479
F P G G+T VE E
Sbjct: 176 FGPTGIGFG-GLTHQVEKKE 194
Score = 110 (43.8 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 22/69 (31%), Positives = 32/69 (46%)
Query: 404 KCAICGHLIMEMI-LQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC C + +Q G+S+H CF C C + LD +++IYC Y R +
Sbjct: 9 KCGACDKTVYHAEEIQCNGRSFHKTCFHCMACRKALDSTTVAAH-ESEIYCKVCYGRKYG 67
Query: 463 PKCAACGKG 471
PK G+G
Sbjct: 68 PKGIGFGQG 76
Score = 82 (33.9 bits), Expect = 1.0e-08, Sum P(2) = 1.0e-08
Identities = 21/65 (32%), Positives = 30/65 (46%)
Query: 464 KCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG--LQLTDEPDKRCYPLQGRLM 521
KC CGK + E +V+ K +H C+ C CG L+ T+ DK G L
Sbjct: 119 KCPRCGKSVYAAE------KVMGGGKPWHKTCFPCAICGKSLESTNVTDK-----DGELY 167
Query: 522 CRACH 526
C+ C+
Sbjct: 168 CKVCY 172
Score = 76 (31.8 bits), Expect = 0.00013, Sum P(2) = 0.00013
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY 372
C C + V A + Q G +H CF C +C +AL +YC+ Y
Sbjct: 10 CGACDKTVYHA-EEIQCNGRSFHKTCFHCMACRKALDSTTVAAHESEIYCKVCY 62
>ZFIN|ZDB-GENE-030131-874 [details] [associations]
symbol:si:dkey-23o10.3 "si:dkey-23o10.3"
species:7955 "Danio rerio" [GO:0007010 "cytoskeleton organization"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003779 "actin binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153
ZFIN:ZDB-GENE-030131-874 HOVERGEN:HBG031499 Gene3D:1.10.950.10
Gene3D:2.10.110.10 SUPFAM:SSF47050 GeneTree:ENSGT00700000104021
HOGENOM:HOG000285997 NextBio:20888389 EMBL:CR457461 IPI:IPI00919355
Ensembl:ENSDART00000060067 Uniprot:F6PFJ2
Length = 682
Score = 164 (62.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 45/156 (28%), Positives = 68/156 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C +CG+ ++G + A+G YH CF+C C + + + RV +SG +
Sbjct: 81 CDSCGDFISG--EVVSALGRTYHPQCFVCSVCRKP------FPIGDRV------TFSGKE 126
Query: 379 QTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNEC 437
++C+I L+ CA C I + L A+ K +H CFRC C
Sbjct: 127 CVCQQCSI--KLVNPNEPIKIHGPSYCAGCKEEIKQGQSLLALEKQWHVSCFRCQTCGLV 184
Query: 438 LDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGIT 473
L G + D YC +DYH F KC C + I+
Sbjct: 185 LTGE--YISKDGVPYCESDYHAQFGIKCETCDRYIS 218
Score = 159 (61.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 54/182 (29%), Positives = 84/182 (46%)
Query: 343 NCFICCS-C-GRALRGKAFYNVHGRVY----CEEDYLYSGFQQTAEKCAICGHLIMEMYS 396
+CF C C G +R + + H + + C D +SGF Q + + IC +Y
Sbjct: 21 HCFRCRELCKGEVVRVQHVH-FHIKCFTCQVCGCDLAHSGFFQKSGEY-ICTSDYQRLYG 78
Query: 397 GFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFT----VDVDN 449
KC CG I ++ A+G++YHP CF C +C + D V F+ V
Sbjct: 79 ------TKCDSCGDFISGEVVSALGRTYHPQCFVCSVCRKPFPIGDRVTFSGKECVCQQC 132
Query: 450 KIYCVNDYH--RMFAPK-CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLT 506
I VN ++ P CA C + I +G +++++K +HV C+ C+ CGL LT
Sbjct: 133 SIKLVNPNEPIKIHGPSYCAGCKEEIK--QGQS----LLALEKQWHVSCFRCQTCGLVLT 186
Query: 507 DE 508
E
Sbjct: 187 GE 188
Score = 94 (38.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 29/94 (30%), Positives = 36/94 (38%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY--LYSG 376
C C E G Q + +H CF C CG L F+ G C DY LY
Sbjct: 22 CFRCRELCKGEVVRVQHVH--FHIKCFTCQVCGCDLAHSGFFQKSGEYICTSDYQRLYG- 78
Query: 377 FQQTAEKCAICGHLIM-EMYSGFQQTAE-KCAIC 408
KC CG I E+ S +T +C +C
Sbjct: 79 -----TKCDSCGDFISGEVVSALGRTYHPQCFVC 107
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLC 434
KC C I +L+A GK YHP C RC C
Sbjct: 209 KCETCDRYISGRVLEAGGKHYHPTCARCARC 239
>ZFIN|ZDB-GENE-070112-1122 [details] [associations]
symbol:ablim3 "actin binding LIM protein family,
member 3" species:7955 "Danio rerio" [GO:0003779 "actin binding"
evidence=IEA] [GO:0007010 "cytoskeleton organization" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] Pfam:PF00412 InterPro:IPR001781
InterPro:IPR003128 Pfam:PF02209 PROSITE:PS00478 PROSITE:PS50023
PROSITE:PS51089 SMART:SM00132 SMART:SM00153
ZFIN:ZDB-GENE-070112-1122 eggNOG:NOG302299 HOVERGEN:HBG031499
Gene3D:1.10.950.10 Gene3D:2.10.110.10 SUPFAM:SSF47050
GeneTree:ENSGT00700000104021 HOGENOM:HOG000285997 OrthoDB:EOG4PNXGH
EMBL:CU151895 IPI:IPI00919704 UniGene:Dr.111054
Ensembl:ENSDART00000052595 NextBio:20888389 Uniprot:F6P113
Length = 683
Score = 164 (62.8 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 45/156 (28%), Positives = 68/156 (43%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSGFQ 378
C +CG+ ++G + A+G YH CF+C C + + + RV +SG +
Sbjct: 82 CDSCGDFISG--EVVSALGRTYHPQCFVCSVCRKP------FPIGDRV------TFSGKE 127
Query: 379 QTAEKCAICGHLIMEMYSGFQQTAEKCAICGHLIME-MILQAMGKSYHPGCFRCCLCNEC 437
++C+I L+ CA C I + L A+ K +H CFRC C
Sbjct: 128 CVCQQCSI--KLVNPNEPIKIHGPSYCAGCKEEIKQGQSLLALEKQWHVSCFRCQTCGLV 185
Query: 438 LDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGIT 473
L G + D YC +DYH F KC C + I+
Sbjct: 186 LTGE--YISKDGVPYCESDYHAQFGIKCETCDRYIS 219
Score = 159 (61.0 bits), Expect = 3.7e-08, P = 3.7e-08
Identities = 54/182 (29%), Positives = 84/182 (46%)
Query: 343 NCFICCS-C-GRALRGKAFYNVHGRVY----CEEDYLYSGFQQTAEKCAICGHLIMEMYS 396
+CF C C G +R + + H + + C D +SGF Q + + IC +Y
Sbjct: 22 HCFRCRELCKGEVVRVQHVH-FHIKCFTCQVCGCDLAHSGFFQKSGEY-ICTSDYQRLYG 79
Query: 397 GFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECL---DGVPFT----VDVDN 449
KC CG I ++ A+G++YHP CF C +C + D V F+ V
Sbjct: 80 ------TKCDSCGDFISGEVVSALGRTYHPQCFVCSVCRKPFPIGDRVTFSGKECVCQQC 133
Query: 450 KIYCVNDYH--RMFAPK-CAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLT 506
I VN ++ P CA C + I +G +++++K +HV C+ C+ CGL LT
Sbjct: 134 SIKLVNPNEPIKIHGPSYCAGCKEEIK--QGQS----LLALEKQWHVSCFRCQTCGLVLT 187
Query: 507 DE 508
E
Sbjct: 188 GE 189
Score = 94 (38.1 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 29/94 (30%), Positives = 36/94 (38%)
Query: 319 CHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY--LYSG 376
C C E G Q + +H CF C CG L F+ G C DY LY
Sbjct: 23 CFRCRELCKGEVVRVQHVH--FHIKCFTCQVCGCDLAHSGFFQKSGEYICTSDYQRLYG- 79
Query: 377 FQQTAEKCAICGHLIM-EMYSGFQQTAE-KCAIC 408
KC CG I E+ S +T +C +C
Sbjct: 80 -----TKCDSCGDFISGEVVSALGRTYHPQCFVC 108
Score = 87 (35.7 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 15/31 (48%), Positives = 17/31 (54%)
Query: 404 KCAICGHLIMEMILQAMGKSYHPGCFRCCLC 434
KC C I +L+A GK YHP C RC C
Sbjct: 210 KCETCDRYISGRVLEAGGKHYHPTCARCARC 240
>FB|FBgn0041789 [details] [associations]
symbol:Pax "Paxillin" species:7227 "Drosophila melanogaster"
[GO:0007016 "cytoskeletal anchoring at plasma membrane"
evidence=ISS] [GO:0005925 "focal adhesion" evidence=ISS;NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0035218 "leg disc
development" evidence=IMP] [GO:0032319 "regulation of Rho GTPase
activity" evidence=IGI] [GO:0035220 "wing disc development"
evidence=IMP] [GO:0010506 "regulation of autophagy" evidence=IGI]
Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478 PROSITE:PS50023
SMART:SM00132 EMBL:AE014134 GO:GO:0046872 GO:GO:0008270
GO:GO:0005925 GO:GO:0035220 GO:GO:0010506 Gene3D:2.10.110.10
GeneTree:ENSGT00700000104021 GO:GO:0007016 GO:GO:0032319
GO:GO:0035218 eggNOG:NOG267887 KO:K05760 RefSeq:NP_001033913.1
RefSeq:NP_724184.2 UniGene:Dm.6483 SMR:Q2PDT4 STRING:Q2PDT4
EnsemblMetazoa:FBtr0081211 EnsemblMetazoa:FBtr0100449 GeneID:35215
KEGG:dme:Dmel_CG31794 UCSC:CG31794-RF CTD:35215 FlyBase:FBgn0041789
InParanoid:Q2PDT4 OrthoDB:EOG4DBRVZ GenomeRNAi:35215 NextBio:792414
Uniprot:Q2PDT4
Length = 581
Score = 163 (62.4 bits), Expect = 1.0e-08, P = 1.0e-08
Identities = 39/126 (30%), Positives = 63/126 (50%)
Query: 385 AICGHLIMEMYSGFQQTAEK--CAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVP 442
++ G+L M T +K C C I+ ++ A+GK++HP F C C++ L G
Sbjct: 326 SMLGNLQANMSRQGVNTVQKGCCNACEKPIVGQVITALGKTWHPEHFTCNHCSQEL-GTR 384
Query: 443 FTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCG 502
+ D YC DYH +F+P+CA C I ++ V ++DK +H + + C CG
Sbjct: 385 NFFERDGFPYCEPDYHNLFSPRCAYCNGAIL-----DKCV--TALDKTWHTEHFFCAQCG 437
Query: 503 LQLTDE 508
Q +E
Sbjct: 438 QQFGEE 443
Score = 159 (61.0 bits), Expect = 2.9e-08, P = 2.9e-08
Identities = 51/174 (29%), Positives = 70/174 (40%)
Query: 338 NLYHTNCFICCS-----CGRALRGKAFYNVHGR-VYCEEDYLYSGFQQTAEKCAICGHLI 391
NL+ C C C AL K ++ H C + + GF + K C +
Sbjct: 401 NLFSPRCAYCNGAILDKCVTAL-DKTWHTEHFFCAQCGQQFGEEGFHERDGK-PYCRNDY 458
Query: 392 MEMYSGFQQTAEKCAICGHLIMEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKI 451
EM+ A KC C IME + A+ +HP CF C C + G F D +
Sbjct: 459 FEMF------APKCNGCNRAIMENYISALNSQWHPDCFVCRDCRQPFQGGSF-FDHEGLP 511
Query: 452 YCVNDYHRMFAPKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQL 505
YC YH CA C K P+ G + +M K FH + ++C C QL
Sbjct: 512 YCETHYHAKRGSLCAGCSK---PITGR----CITAMFKKFHPEHFVCAFCLKQL 558
Score = 123 (48.4 bits), Expect = 0.00025, P = 0.00025
Identities = 44/167 (26%), Positives = 71/167 (42%)
Query: 317 GICHTCGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDYLYSG 376
G C+ C + + G Q A+G +H F C C + L + F+ G YCE DY ++
Sbjct: 346 GCCNACEKPIVG--QVITALGKTWHPEHFTCNHCSQELGTRNFFERDGFPYCEPDY-HNL 402
Query: 377 FQQTAEKCAIC-GHLIMEMYSGFQQT--AEK--CAICGHLIMEM-ILQAMGKSYHPGCFR 430
F + +CA C G ++ + + +T E CA CG E + GK Y +
Sbjct: 403 F---SPRCAYCNGAILDKCVTALDKTWHTEHFFCAQCGQQFGEEGFHERDGKPYCRNDYF 459
Query: 431 CCLCNECLDGVPFTVDVDNKIYCVNDYHRMFAPKCAACGKGITPVEG 477
+C +G + ++N I +N + P C C P +G
Sbjct: 460 EMFAPKC-NGCNRAI-MENYISALNS---QWHPDCFVCRDCRQPFQG 501
>ZFIN|ZDB-GENE-030909-4 [details] [associations]
symbol:csrp1a "cysteine and glycine-rich protein 1a"
species:7955 "Danio rerio" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0060027 "convergent extension involved in
gastrulation" evidence=IMP] [GO:0007254 "JNK cascade" evidence=IMP]
[GO:0042074 "cell migration involved in gastrulation" evidence=IMP]
[GO:0016055 "Wnt receptor signaling pathway" evidence=IMP]
[GO:0003007 "heart morphogenesis" evidence=IMP] [GO:0005622
"intracellular" evidence=IMP] [GO:0046872 "metal ion binding"
evidence=IEA] Pfam:PF00412 InterPro:IPR001781 PROSITE:PS00478
PROSITE:PS50023 SMART:SM00132 ZFIN:ZDB-GENE-030909-4 GO:GO:0016055
GO:GO:0007254 GO:GO:0046872 GO:GO:0003007 GO:GO:0008270
Gene3D:2.10.110.10 GO:GO:0042074 GO:GO:0060027
GeneTree:ENSGT00550000074548 HOVERGEN:HBG051143 eggNOG:NOG281414
KO:K09377 OMA:NKCGCCQ HOGENOM:HOG000111233 HSSP:P32965
EMBL:CT025929 EMBL:BC065956 IPI:IPI00498914 RefSeq:NP_991130.1
UniGene:Dr.83404 SMR:Q6NZV4 IntAct:Q6NZV4 STRING:Q6NZV4
Ensembl:ENSDART00000019455 GeneID:378726 KEGG:dre:378726 CTD:378726
InParanoid:Q6NZV4 OrthoDB:EOG4W0XFB NextBio:20813797 Uniprot:Q6NZV4
Length = 192
Score = 118 (46.6 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 25/80 (31%), Positives = 40/80 (50%)
Query: 402 AEKCAICGHLIM--EMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHR 459
++ C C + E ++ A G ++H GCFRC +C + L+ D D +IYC Y +
Sbjct: 115 SDVCPRCSKAVYAAEKVIGA-GNAWHRGCFRCAMCGKGLESTTLA-DKDGEIYCKGCYAK 172
Query: 460 MFAPKCAACGKGITPVEGTE 479
F PK G+G + T+
Sbjct: 173 NFGPKGFGYGQGAGALSHTQ 192
Score = 116 (45.9 bits), Expect = 0.00012, P = 0.00012
Identities = 37/125 (29%), Positives = 53/125 (42%)
Query: 404 KCAICGHLI-MEMILQAMGKSYHPGCFRCCLCNECLDGVPFTVDVDNKIYCVNDYHRMFA 462
KC C + +Q G+S+H CF C +C + LD V +N+IYC Y + +
Sbjct: 8 KCGCCQKTVYFAEEVQCEGRSFHRSCFLCMVCRKNLDSTTVAVH-ENEIYCKACYGKKYG 66
Query: 463 PKCAACGKGITPVEGTEETVRVVSMDKDFHVDCYMCEDCGLQLTDEPD--KRCYPLQGRL 520
PK G G GT +SMDK + + E Q T+ P+ K G
Sbjct: 67 PKGYGYGAGA----GT------LSMDKGESLGIKVVEPQNHQPTNNPNTSKFAQKFGGSD 116
Query: 521 MCRAC 525
+C C
Sbjct: 117 VCPRC 121
Score = 71 (30.1 bits), Expect = 1.1e-08, Sum P(2) = 1.1e-08
Identities = 13/51 (25%), Positives = 21/51 (41%)
Query: 322 CGEKVTGAGQACQAMGNLYHTNCFICCSCGRALRGKAFYNVHGRVYCEEDY 372
C +K + Q G +H +CF+C C + L +YC+ Y
Sbjct: 11 CCQKTVYFAEEVQCEGRSFHRSCFLCMVCRKNLDSTTVAVHENEIYCKACY 61
WARNING: HSPs involving 389 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.137 0.441 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 543 467 0.00098 118 3 11 22 0.38 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 639
No. of states in DFA: 609 (65 KB)
Total size of DFA: 307 KB (2154 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 40.55u 0.12s 40.67t Elapsed: 00:00:04
Total cpu time: 40.61u 0.12s 40.73t Elapsed: 00:00:04
Start: Thu Aug 15 11:19:37 2013 End: Thu Aug 15 11:19:41 2013
WARNINGS ISSUED: 2