Query psy14114
Match_columns 248
No_of_seqs 111 out of 477
Neff 8.3
Searched_HMMs 29240
Date Fri Aug 16 19:54:24 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14114.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14114hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1zww_A SH3-containing GRB2-lik 100.0 2.2E-53 7.4E-58 364.4 24.3 233 6-247 4-241 (256)
2 2z0v_A SH3-containing GRB2-lik 100.0 1.2E-51 3.9E-56 350.5 21.3 219 20-247 2-225 (240)
3 2fic_A Bridging integrator 1; 100.0 4.2E-28 1.4E-32 206.7 22.0 221 3-248 23-248 (251)
4 1uru_A Amphiphysin; endocytosi 99.9 2.4E-26 8.1E-31 194.8 21.6 220 1-245 6-232 (244)
5 4avm_A Bridging integrator 2; 99.9 1.2E-20 4E-25 159.3 22.7 220 3-247 4-228 (237)
6 4a3a_A Amphiphysin; structural 99.9 4.8E-21 1.7E-25 162.1 17.0 220 3-247 9-233 (243)
7 2q12_A DIP13 alpha, DCC-intera 99.8 1.2E-19 4E-24 155.7 19.5 195 36-247 24-227 (265)
8 2q13_A DCC-interacting protein 99.8 1E-17 3.5E-22 150.8 18.1 195 36-247 24-227 (385)
9 4h8s_A DCC-interacting protein 99.5 1.1E-12 3.8E-17 118.7 20.5 196 34-246 45-249 (407)
10 1i4d_A Arfaptin 2, partner of 99.3 1.8E-09 6.2E-14 89.1 21.0 197 28-246 3-206 (224)
11 4akv_A Sorting nexin-33; trans 98.6 2.8E-06 9.7E-11 76.1 18.8 198 32-247 180-384 (386)
12 3dyt_A Sorting nexin-9; 3-heli 98.6 3E-06 1E-10 75.4 17.0 196 32-247 160-364 (366)
13 2ykt_A Brain-specific angiogen 98.2 0.00061 2.1E-08 57.3 21.6 143 105-247 73-230 (253)
14 3ok8_A Brain-specific angiogen 97.8 0.009 3.1E-07 48.9 23.3 140 105-247 71-219 (222)
15 2d1l_A Metastasis suppressor p 97.5 0.025 8.7E-07 47.3 19.4 139 105-247 76-234 (253)
16 3haj_A Human pacsin2 F-BAR; pa 96.9 0.23 8E-06 45.3 21.6 71 105-175 77-176 (486)
17 3aco_A Pacsin2, protein kinase 96.8 0.15 5E-06 44.5 19.0 40 106-145 85-124 (350)
18 4dyl_A Tyrosine-protein kinase 96.8 0.093 3.2E-06 46.9 17.3 90 32-145 11-108 (406)
19 2efl_A Formin-binding protein 96.7 0.24 8.4E-06 41.8 20.9 69 106-175 73-163 (305)
20 2efk_A CDC42-interacting prote 96.7 0.25 8.5E-06 41.7 22.3 71 105-175 65-156 (301)
21 3caz_A BAR protein; thermo-aci 96.4 0.07 2.4E-06 42.4 12.1 112 135-247 102-217 (294)
22 2x3v_A Syndapin I, protein kin 96.4 0.43 1.5E-05 41.2 23.1 71 106-176 76-175 (337)
23 3abh_A Pacsin2, protein kinase 96.3 0.42 1.4E-05 40.7 21.0 69 106-174 85-182 (312)
24 3g9g_A Suppressor of yeast pro 96.0 0.44 1.5E-05 40.5 16.1 121 106-237 119-242 (287)
25 3i2w_A Syndapin, LD46328P; EFC 96.0 0.62 2.1E-05 39.2 19.4 40 106-145 64-103 (290)
26 3qwe_A GMIP, GEM-interacting p 95.7 0.64 2.2E-05 39.3 15.9 97 129-226 114-223 (279)
27 2v0o_A FCHO2, FCH domain only 95.3 1 3.6E-05 37.3 19.5 92 32-145 17-108 (276)
28 3m3w_A Pacsin3, protein kinase 94.5 2.1 7E-05 36.7 22.3 40 106-145 76-115 (320)
29 2q13_A DCC-interacting protein 85.7 17 0.00059 31.6 18.6 118 31-165 26-147 (385)
30 2q12_A DIP13 alpha, DCC-intera 81.5 21 0.0007 29.3 18.8 120 30-167 25-149 (265)
31 3ghg_A Fibrinogen alpha chain; 80.0 12 0.00039 34.3 9.7 48 185-233 115-162 (562)
32 1ic2_A Tropomyosin alpha chain 55.4 43 0.0015 22.3 9.1 22 153-174 3-24 (81)
33 4hpq_C ATG17, KLTH0D15642P; au 50.1 1.4E+02 0.0046 26.5 10.8 54 1-56 6-59 (413)
34 2z0v_A SH3-containing GRB2-lik 46.1 1.1E+02 0.0039 24.4 16.8 67 87-164 91-158 (240)
35 2d1l_A Metastasis suppressor p 46.0 69 0.0024 26.4 7.4 23 111-133 75-97 (253)
36 3te3_A Polycystic kidney disea 43.0 46 0.0016 19.1 4.2 28 32-59 6-33 (39)
37 4hpq_C ATG17, KLTH0D15642P; au 41.5 1.9E+02 0.0064 25.6 10.1 37 135-175 312-348 (413)
38 4gif_A Polycystic kidney disea 36.8 65 0.0022 19.1 4.2 28 32-59 6-33 (45)
39 1zww_A SH3-containing GRB2-lik 31.4 2E+02 0.007 23.1 13.5 159 1-174 6-192 (256)
40 3aco_A Pacsin2, protein kinase 30.1 2.3E+02 0.0079 23.8 8.6 32 145-176 153-184 (350)
41 4aj5_1 SKA3, spindle and kinet 27.3 1.6E+02 0.0055 20.5 10.7 42 207-248 58-99 (101)
42 3vkg_A Dynein heavy chain, cyt 27.2 7.4E+02 0.025 28.2 15.0 25 106-130 1921-1945(3245)
43 1s35_A Beta-I spectrin, spectr 26.0 2.2E+02 0.0074 21.6 20.4 45 10-54 7-51 (214)
44 3vkg_A Dynein heavy chain, cyt 25.5 7.9E+02 0.027 28.0 15.6 101 109-212 1863-1966(3245)
45 2yy0_A C-MYC-binding protein; 24.6 41 0.0014 20.6 1.9 38 18-57 6-43 (53)
46 1m1j_A Fibrinogen alpha subuni 23.5 4E+02 0.014 23.9 13.5 77 147-233 87-163 (491)
47 2pnv_A Small conductance calci 22.6 63 0.0022 18.9 2.4 29 29-57 12-40 (43)
48 3hrn_A Transient receptor pote 22.6 1.4E+02 0.0048 19.0 4.2 27 32-58 5-31 (64)
49 1i4d_A Arfaptin 2, partner of 21.9 3.1E+02 0.011 22.0 16.7 20 222-241 175-194 (224)
50 3plt_A Sphingolipid long chain 21.3 3.3E+02 0.011 22.0 21.0 53 88-143 47-99 (234)
No 1
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=100.00 E-value=2.2e-53 Score=364.40 Aligned_cols=233 Identities=26% Similarity=0.392 Sum_probs=188.0
Q ss_pred hhHHHHHHHHHHHHhhhhcCcccccCChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhh-----cC
Q psy14114 6 KDAGSALSRVVQLTEEKLGTSEKTELDAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEK-----KR 80 (248)
Q Consensus 6 ~~~~~~~~r~~Q~~~Ek~G~~ekTel~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~-----~~ 80 (248)
.-++++|+|++||++||+|++|+|++|+||.++|+++|.++.++++|++.++.|++|||+.|.+.+..+.+++ +.
T Consensus 4 ~g~kK~~~ra~q~~~ek~G~~E~Tel~~d~~~lE~r~d~~k~~~~kl~k~~~~yl~~np~~r~~~~~~~~i~k~~g~~k~ 83 (256)
T 1zww_A 4 AGLKKQFHKATQKVSEKVGGAEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKG 83 (256)
T ss_dssp -----------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTTC------------------
T ss_pred hhHHHHHHHHHHHHHhHhccccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHhhccccc
Confidence 3478999999999999999999999999999999999999999999999999999999999988655444433 23
Q ss_pred CCCCCchhHHHHHHHHhcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhh
Q psy14114 81 PSRLSNLEYLGLDMTEAGNAFGPGTTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLES 160 (248)
Q Consensus 81 ~~~~~~~~~Lg~~m~~~~~~~~~~s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~ 160 (248)
+.+|.+...||.+|.++|.++|++++||.||..||.++.+||+++..++..|..+|++||++|++.+|++|.++||+|++
T Consensus 84 ~~~p~~~~~L~~~m~~~~~~l~~~s~~g~aL~~~g~a~~~la~~~~~~~~~i~~~~l~pl~~~l~~~~k~i~k~rkkl~~ 163 (256)
T 1zww_A 84 PGYPQAEALLAEAMLKFGRELGDDCNFGPALGEVGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDLREIQHHLKKLEG 163 (256)
T ss_dssp ---CCHHHHHHHHHHHHHHHHCSSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHHHHHHhhCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555557999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhHHHHHHHHhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHHHHHHHHHHHHHHHHH
Q psy14114 161 KRLDLDSCKNRVRKARSLLGTQSNAERDLRIAQSEFDRQAEITKLLLEGVQTSHTSHLRCLHEFVEAQVNYYANCHKIMQ 240 (248)
Q Consensus 161 ~RLd~Daak~k~~kak~~~~~~~~~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~e~~~~L~~lv~aQ~~y~~~~~~~L~ 240 (248)
+|||||++|+++++. +++|++.|+++|+.+++++...|.+|++++++++.+|.+||++|++||++|+++|+
T Consensus 164 ~rLdyD~~k~k~~k~---------~eeEle~A~~~fe~~~e~~~~~m~~l~~~e~e~~~~L~~~v~aQl~y~~~~~e~L~ 234 (256)
T 1zww_A 164 RRLDFGYKKKRQGKI---------PDEELRQALEKFDESKEIAESSMFNLLEMDIEQVSQLSALVQAQLEYHKQAVQILQ 234 (256)
T ss_dssp HHHHHHHHHHTTTTS---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccc---------cHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998753 68899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhc
Q psy14114 241 DLKNELS 247 (248)
Q Consensus 241 ~l~~~l~ 247 (248)
++++.|+
T Consensus 235 ~l~~~l~ 241 (256)
T 1zww_A 235 QVTVRLE 241 (256)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 9999985
No 2
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=100.00 E-value=1.2e-51 Score=350.49 Aligned_cols=219 Identities=27% Similarity=0.412 Sum_probs=194.5
Q ss_pred hhhhcCcccccCChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHH---Hhhh--cCCCCCCchhHHHHHH
Q psy14114 20 EEKLGTSEKTELDAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFE---KIEK--KRPSRLSNLEYLGLDM 94 (248)
Q Consensus 20 ~Ek~G~~ekTel~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~---k~~~--~~~~~~~~~~~Lg~~m 94 (248)
+||+|++++|++|+||.+||+++|.++.+|.+|++.++.|++|||+.|.+.++.+ ++.+ +.|.+|.|.+.||++|
T Consensus 2 ~Ek~G~~ekTel~~d~~~lE~r~d~~~~~~~~l~k~~~~yl~pn~~~r~~~~~~~~i~k~~~~~k~~~~~~~~~~L~~~m 81 (240)
T 2z0v_A 2 SSGSSGAEGTKLDDEFLDMERKIDVTNKVVAEILSKTTEYLQPNPAYRAKLGMLNTVSKIRGQVKTTGYPQTEGLLGDCM 81 (240)
T ss_dssp ------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSHHHHHHHHTCCCCCCSSCCCCCCSSCCHHHHHHHHH
T ss_pred CCCCCCCccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcchhHHHHHHHHHHHHhccccCCCCCCcHHHHHHHH
Confidence 6999999999999999999999999999999999999999999999887755444 4433 4456788889999999
Q ss_pred HHhcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHh
Q psy14114 95 TEAGNAFGPGTTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKRLDLDSCKNRVRK 174 (248)
Q Consensus 95 ~~~~~~~~~~s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~Daak~k~~k 174 (248)
.++|.++|++|+||.||.+||.++.+||+++..++..++.+|++||++|++.+|++|.++||+|+++|||||++|+|+++
T Consensus 82 ~~~~~~l~~ds~~g~aL~~~g~a~~~ia~~~~~~~~~v~~~~l~pL~~~l~~d~k~i~~~rKkle~~rLd~D~ak~k~~k 161 (240)
T 2z0v_A 82 LKYGKELGEDSTFGNALIEVGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGHHLKKLEGRRLDYDYKKKRVGK 161 (240)
T ss_dssp HHHHHHHCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHTTTTS
T ss_pred HHHHhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999965
Q ss_pred hccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14114 175 ARSLLGTQSNAERDLRIAQSEFDRQAEITKLLLEGVQTSHTSHLRCLHEFVEAQVNYYANCHKIMQDLKNELS 247 (248)
Q Consensus 175 ak~~~~~~~~~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~e~~~~L~~lv~aQ~~y~~~~~~~L~~l~~~l~ 247 (248)
. +++|++.|+++|+++++.+...|.+|++++++++++|.+||+||++||++|+++|++|+++|+
T Consensus 162 ~---------~eeEl~~A~~~fe~~~e~~~~~m~~~~~~~~e~l~~l~~~v~aQl~y~~~~~e~L~~l~~~l~ 225 (240)
T 2z0v_A 162 I---------PDEEVRQAVEKFEESKELAERSMFNFLENDVEQVSQLAVFIEAALDYHRQSTEILQELQSKLQ 225 (240)
T ss_dssp S---------CHHHHHHHHHHHHHHHHHHHHHHHHHHHSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred c---------cHHHHHHHHHHHHHHHHHHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1 689999999999999999999999999999999999999999999999999999999999985
No 3
>2fic_A Bridging integrator 1; BAR domain, homodimer, coiled-coils, endocytosis/exocytosis, protein complex, endocytosis-exocytosis; 1.99A {Homo sapiens} PDB: 2rmy_A 2rnd_A
Probab=99.96 E-value=4.2e-28 Score=206.75 Aligned_cols=221 Identities=15% Similarity=0.154 Sum_probs=157.9
Q ss_pred chHhhHHHHHHHHHHHHhhhhcCcccccCChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCC
Q psy14114 3 QFVKDAGSALSRVVQLTEEKLGTSEKTELDAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPS 82 (248)
Q Consensus 3 ~~~~~~~~~~~r~~Q~~~Ek~G~~ekTel~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~ 82 (248)
.|+..++++|+|+.|++.+++|.+++| .|++|..++++++.+..++.+|++.++.|+++. +...
T Consensus 23 ~~~~~~~K~~~Ra~q~~~~k~G~~e~T-~D~~Fe~~~~~f~~~e~~~~~l~k~~k~y~~~~---~~~~------------ 86 (251)
T 2fic_A 23 KIASNVQKKLTRAQEKVLQKLGKADET-KDEQFEQCVQNFNKQLTEGTRLQKDLRTYLASV---KAMH------------ 86 (251)
T ss_dssp ------------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH------------
T ss_pred HHHHHHHHHHHHhhHHHHHHcCCcccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH------------
Confidence 477888999999999999999999998 799999999999999999999999999999852 1110
Q ss_pred CCCchhHHHHHHHHhcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhh
Q psy14114 83 RLSNLEYLGLDMTEAGNAFGPGTTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKR 162 (248)
Q Consensus 83 ~~~~~~~Lg~~m~~~~~~~~~~s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~R 162 (248)
.....||.+|.+.. +++...+.++..+|+.+. .+..++...+...|+.||.+++. +|+.+.+.++|++++|
T Consensus 87 --~~~~~l~~~~~~l~---~~~~~~~~~~~~~~~~~~---~~~~d~~~~l~~~vi~Pl~~~~~-~~~~i~~~ikKR~~k~ 157 (251)
T 2fic_A 87 --EASKKLNECLQEVY---EPDWPGRDEANKIAENND---LLWMDYHQKLVDQALLTMDTYLG-QFPDIKSRIAKRGRKL 157 (251)
T ss_dssp --HHHHHHHHHHHHHC---CTTSTTHHHHHHHHHHHH---HHHHHHHHHHHHHTHHHHHHHHH-THHHHHHHHHHHHHHH
T ss_pred --HHHHHHHHHHHHHh---CCCcCCchhHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH
Confidence 02357888888743 344445667777776554 44456666788899999999996 9999999999999999
Q ss_pred hhhHHHHHHHHhhccc----cccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhHH-HHHHHHHHHHHHHHHHHH
Q psy14114 163 LDLDSCKNRVRKARSL----LGTQSNAERDLRIAQSEFDRQAEITKLLLEGVQTSHTSHLR-CLHEFVEAQVNYYANCHK 237 (248)
Q Consensus 163 Ld~Daak~k~~kak~~----~~~~~~~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~e~~~-~L~~lv~aQ~~y~~~~~~ 237 (248)
||||++++++.+.+.. +.+...++++++.|+..|+...+.+...|+.+...+.+.+. +|..||.+|+.||.+|++
T Consensus 158 lDyD~~~~~l~kl~~k~~kd~~kl~kae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~~~~l~~f~~~Q~~f~~~~~~ 237 (251)
T 2fic_A 158 VDYDSARHHYESLQTAKKKDEAKIAKAEEELIKAQKVFEEMNVDLQEELPSLWNSRVGFYVNTFQSIAGLEENFHKEMSK 237 (251)
T ss_dssp HHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999875322 11222378999999999999999999999999999888887 999999999999999999
Q ss_pred HHHHHHHhhcC
Q psy14114 238 IMQDLKNELSK 248 (248)
Q Consensus 238 ~L~~l~~~l~~ 248 (248)
++.+|.+.|++
T Consensus 238 ~~~~L~~~l~~ 248 (251)
T 2fic_A 238 LNQNLNDVLVG 248 (251)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHHHHHHHh
Confidence 99999998864
No 4
>1uru_A Amphiphysin; endocytosis, coiled-coil, membrane curvature; 2.6A {Drosophila melanogaster} SCOP: a.238.1.1
Probab=99.95 E-value=2.4e-26 Score=194.77 Aligned_cols=220 Identities=13% Similarity=0.097 Sum_probs=160.6
Q ss_pred CcchHhhHHHHHHHHHHHHhhhhcCcccccCChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcC
Q psy14114 1 MKQFVKDAGSALSRVVQLTEEKLGTSEKTELDAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKR 80 (248)
Q Consensus 1 ~~~~~~~~~~~~~r~~Q~~~Ek~G~~ekTel~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~ 80 (248)
+++++..++++|+|+.|.+.+++|.+++| .|++|.+++++++.+..++.+|++.++.|+++ .+.. ..
T Consensus 6 ~~~~~~~~~k~~~R~~q~~~~k~G~~e~t-~D~~fe~~~~~f~~~e~~~~~l~k~~~~y~~~---~~~~--~~------- 72 (244)
T 1uru_A 6 GIMLAKSVQKHAGRAKEKILQNLGKVDRT-ADEIFDDHLNNFNRQQASANRLQKEFNNYIRC---VRAA--QA------- 72 (244)
T ss_dssp --------------------CCSSCTTCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH--HH-------
T ss_pred cchHHHHHHHHHHHHHHHHHHHhCCCccc-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH--HH-------
Confidence 46789999999999999999999999998 69999999999999999999999999999874 1111 00
Q ss_pred CCCCCchhHHHHHHHHhcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhh
Q psy14114 81 PSRLSNLEYLGLDMTEAGNAFGPGTTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLES 160 (248)
Q Consensus 81 ~~~~~~~~~Lg~~m~~~~~~~~~~s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~ 160 (248)
....||.+|..... +++..+.++.. ....++.+..++...+...|+.||..++. +|+.+.+.++|+++
T Consensus 73 -----~~~~l~~~~~~l~~---~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~vi~Pl~~~~~-~~~~i~~~ikKR~~ 140 (244)
T 1uru_A 73 -----ASKTLMDSVCEIYE---PQWSGYDALQA---QTGASESLWADFAHKLGDQVLIPLNTYTG-QFPEMKKKVEKRNR 140 (244)
T ss_dssp -----HHHHHHHHHHHHSC---TTSTTHHHHHH---HHHHHHHHHHHHHHHHHTTTHHHHHHHHH-HHHHHHHHHHHHHH
T ss_pred -----HHHHHHHHHHHHhC---CCCCCchHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 13568888887544 33333334433 33457888889999999999999999997 99999999999999
Q ss_pred hhhhhHHHHHHHHhhcc------ccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhHH-HHHHHHHHHHHHHH
Q psy14114 161 KRLDLDSCKNRVRKARS------LLGTQSNAERDLRIAQSEFDRQAEITKLLLEGVQTSHTSHLR-CLHEFVEAQVNYYA 233 (248)
Q Consensus 161 ~RLd~Daak~k~~kak~------~~~~~~~~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~e~~~-~L~~lv~aQ~~y~~ 233 (248)
+|+|||++++++.+.+. ++.+...++++++.|+..|+...+.+...|+.+.....+.+. +|..||.+|+.||.
T Consensus 141 k~lDyD~~~~~l~kl~~k~~k~kd~~kl~~ae~el~~ak~~ye~ln~~L~~eLp~l~~~~~~~~~~~l~~fv~~q~~~~~ 220 (244)
T 1uru_A 141 KLIDYDGQRHSFQNLQANANKRKDDVKLTKGREQLEEARRTYEILNTELHDELPALYDSRILFLVTNLQTLFATEQVFHN 220 (244)
T ss_dssp HHHHHHHHHHHHHHHHTTTCBTTBCCTTTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHHHHHHHHHhccccCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999987531 122223489999999999999999999999999998777666 99999999999999
Q ss_pred HHHHHHHHHHHh
Q psy14114 234 NCHKIMQDLKNE 245 (248)
Q Consensus 234 ~~~~~L~~l~~~ 245 (248)
++..++..|.+.
T Consensus 221 ~~~~~~~~l~~~ 232 (244)
T 1uru_A 221 ETAKIYSELEAI 232 (244)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 995444444443
No 5
>4avm_A Bridging integrator 2; protein binding, plasma membrane, BAR adaptor; 1.91A {Homo sapiens}
Probab=99.88 E-value=1.2e-20 Score=159.33 Aligned_cols=220 Identities=16% Similarity=0.155 Sum_probs=173.8
Q ss_pred chHhhHHHHHHHHHHHHhhhhcCcccccCChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCC
Q psy14114 3 QFVKDAGSALSRVVQLTEEKLGTSEKTELDAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPS 82 (248)
Q Consensus 3 ~~~~~~~~~~~r~~Q~~~Ek~G~~ekTel~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~ 82 (248)
+|+..+++.++|+.|.+.+++|.++.| .|++|.++|+++..+...+.+|++.++.|++. .+... .
T Consensus 4 ~~~k~~~K~~~R~~q~lkqk~G~~e~T-~D~~Fe~~e~rF~~le~~~~kL~k~~k~y~~a---i~~~~--~--------- 68 (237)
T 4avm_A 4 LFAKQVQKKFSRAQEKVLQKLGKAVET-KDERFEQSASNFYQQQAEGHKLYKDLKNFLSA---VKVMH--E--------- 68 (237)
T ss_dssp ---CHHHHHHHHHHHHHHHHTTSSCCC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH--H---------
T ss_pred HHHHHHHHHHhhhhHHHHHHcCCCccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHH--H---------
Confidence 578899999999999999999999998 99999999999999999999999999999873 11111 0
Q ss_pred CCCchhHHHHHHHHhcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhh
Q psy14114 83 RLSNLEYLGLDMTEAGNAFGPGTTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKR 162 (248)
Q Consensus 83 ~~~~~~~Lg~~m~~~~~~~~~~s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~R 162 (248)
....++.++.+......++. ..+..+...+..+...|...+...|+.||..++. .|+.+.+..+|++++.
T Consensus 69 ---~q~~~~~~l~~~y~~~~~~~------~~~~~~~~~~~~l~~~~~~~l~~~vi~Pl~~~~~-~~~~i~k~I~KR~~kl 138 (237)
T 4avm_A 69 ---SSKRVSETLQEIYSSEWDGH------EELKAIVWNNDLLWEDYEEKLADQAVRTMEIYVA-QFSEIKERIAKRGRKL 138 (237)
T ss_dssp ---HHHHHHHHHHHHSCTTSTTH------HHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH-THHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHhCCccCcH------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhHHHHHHHHHHHHHH
Confidence 12456666666554332211 1222222233445667777777779999999998 9999999999999999
Q ss_pred hhhHHHHHHHHhhccc----cccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhHH-HHHHHHHHHHHHHHHHHH
Q psy14114 163 LDLDSCKNRVRKARSL----LGTQSNAERDLRIAQSEFDRQAEITKLLLEGVQTSHTSHLR-CLHEFVEAQVNYYANCHK 237 (248)
Q Consensus 163 Ld~Daak~k~~kak~~----~~~~~~~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~e~~~-~L~~lv~aQ~~y~~~~~~ 237 (248)
+|||.+++++.+.... +.+...++++++.|+..|+...+.+...|+.+......++. +|..||.+|.+||.....
T Consensus 139 lDyd~~~~~~~kl~~k~~kd~~kl~kae~el~~a~~~ye~lN~~L~~eLP~l~~~~~~~~~~~~~~~i~~q~~f~~~~~~ 218 (237)
T 4avm_A 139 VDYDSARHHLEAVQNAKKKDEAKTAKAEEEFNKAQTVFEDLNQELLEELPILYNSRIGCYVTIFQNISNLRDVFYREMSK 218 (237)
T ss_dssp HHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999865321 11112378899999999999999999999999998888888 899999999999999999
Q ss_pred HHHHHHHhhc
Q psy14114 238 IMQDLKNELS 247 (248)
Q Consensus 238 ~L~~l~~~l~ 247 (248)
...+|...|.
T Consensus 219 ~~~~l~~~~~ 228 (237)
T 4avm_A 219 LNHNLYEVMS 228 (237)
T ss_dssp HHHHHHHHHH
T ss_pred HHhhHHHHHH
Confidence 9988877664
No 6
>4a3a_A Amphiphysin; structural genomics, invagination, knobs-IN-holes, curvature membrane, structural genomics consortium; 1.78A {Homo sapiens} PDB: 4atm_A 3sog_A
Probab=99.87 E-value=4.8e-21 Score=162.11 Aligned_cols=220 Identities=15% Similarity=0.141 Sum_probs=165.7
Q ss_pred chHhhHHHHHHHHHHHHhhhhcCcccccCChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCC
Q psy14114 3 QFVKDAGSALSRVVQLTEEKLGTSEKTELDAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPS 82 (248)
Q Consensus 3 ~~~~~~~~~~~r~~Q~~~Ek~G~~ekTel~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~ 82 (248)
.|+.++.+.++|+.|.+..++|.++.| .|++|.++|+++..+...+.+|++.++.|++. .+....
T Consensus 9 ~~~~~i~K~~~Ra~~~l~qk~G~~~~T-~D~~F~~~e~~F~~le~~~~kL~k~~k~y~~a---i~~~~~----------- 73 (243)
T 4a3a_A 9 IFAKNVQKRLNRAQEKVLQKLGKADET-KDEQFEEYVQNFKRQEAEGTRLQRELRGYLAA---IKGMQE----------- 73 (243)
T ss_dssp -----------CGGGCHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH-----------
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCccc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHH-----------
Confidence 478899999999999999999999997 99999999999999999999999999999874 221110
Q ss_pred CCCchhHHHHHHHHhcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhh
Q psy14114 83 RLSNLEYLGLDMTEAGNAFGPGTTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKR 162 (248)
Q Consensus 83 ~~~~~~~Lg~~m~~~~~~~~~~s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~R 162 (248)
....++.++.+...+.+... ..+...++++. .+..+|...+...++.||..++. .|+.+.+..+|++++.
T Consensus 74 ---~q~~~ae~l~~ly~p~~~~~---~~~~~~~~~~~---~l~~d~~~~l~d~~l~Pl~~l~~-~f~~i~k~I~KR~~Kl 143 (243)
T 4a3a_A 74 ---ASMKLTESLHEVYEPDWYGR---EDVKMVGEKCD---VLWEDFHQKLVDGSLLTLDTYLG-QFPDIKNRIAKRSRKL 143 (243)
T ss_dssp ---HHHHHHHHHHHHCCTTSTTH---HHHHHHHHHHH---HHHHHHHHHHHHTHHHHHHHHHH-THHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHcCccccCc---cchHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHH-HChHHHHHHHHhcchH
Confidence 12456666666544332111 11222233322 35566666777788999999999 9999999999999999
Q ss_pred hhhHHHHHHHHhhcc----ccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhHH-HHHHHHHHHHHHHHHHHH
Q psy14114 163 LDLDSCKNRVRKARS----LLGTQSNAERDLRIAQSEFDRQAEITKLLLEGVQTSHTSHLR-CLHEFVEAQVNYYANCHK 237 (248)
Q Consensus 163 Ld~Daak~k~~kak~----~~~~~~~~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~e~~~-~L~~lv~aQ~~y~~~~~~ 237 (248)
||||.+++++.+... ++.+...+++|++.|+..|+..++.+...|+.+......++. +|.+||.+|..||..+..
T Consensus 144 lDYD~~~~k~~kL~~K~~kd~~kl~kae~el~~Ak~~Ye~lN~~L~eELP~l~~~r~~~~~~~~~s~i~~Q~~f~~e~~k 223 (243)
T 4a3a_A 144 VDYDSARHHLEALQSSKRKDESRISKAEEEFQKAQKVFEEFNVDLQEELPSLWSRRVGFYVNTFKNVSSLEAKFHKEIAV 223 (243)
T ss_dssp HHHHHHHHHHHHHHTCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999976532 111112378999999999999999999999999998888888 899999999999999999
Q ss_pred HHHHHHHhhc
Q psy14114 238 IMQDLKNELS 247 (248)
Q Consensus 238 ~L~~l~~~l~ 247 (248)
+..+|...|+
T Consensus 224 ~~~~l~~~~~ 233 (243)
T 4a3a_A 224 LCHKLYEVMT 233 (243)
T ss_dssp HHHHHHHHHH
T ss_pred HHHhHHHHHH
Confidence 9999887764
No 7
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=99.84 E-value=1.2e-19 Score=155.70 Aligned_cols=195 Identities=11% Similarity=0.150 Sum_probs=160.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCCCCCchhHHHHHHHHhccc----CCCCCcHHHHH
Q psy14114 36 ESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPSRLSNLEYLGLDMTEAGNA----FGPGTTYGTAL 111 (248)
Q Consensus 36 ~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~~~~~~~~Lg~~m~~~~~~----~~~~s~~g~aL 111 (248)
..+|..++.++.++.++++.++.++..- .. .......|+.+|.+++.. ..+|..++.+|
T Consensus 24 ~~~E~~~~~l~~~l~kl~k~~~~~~~a~------~~-----------~~~a~~~f~~~L~~~~~~~~~~~~~d~~~~~~L 86 (265)
T 2q12_A 24 GVFEEDATAISNYMNQLYQAMHRIYDAQ------NE-----------LSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTL 86 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HH-----------HHHHHHHHHHHHHGGGGSCCC-----CHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH------HH-----------HHHHHHHHHHHHHHHHhhhccCCCCcHHHHHHH
Confidence 6788999999999999999888776520 00 001246788888887753 34577899999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHhhccccc---cccchHHH
Q psy14114 112 IKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKRLDLDSCKNRVRKARSLLG---TQSNAERD 188 (248)
Q Consensus 112 ~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~Daak~k~~kak~~~~---~~~~~e~e 188 (248)
..||.+...|+..+..+...++..|+.||.+|++.+|+.+...||++++.+.+||++++|+...++.++ ...+++.+
T Consensus 87 ~~f~~~l~ei~~~~~~l~~~~~~~~~~PL~~f~~~dlk~~ke~kk~fdk~~~~yd~al~k~~~~~k~k~~e~~l~Ea~~~ 166 (265)
T 2q12_A 87 QQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTED 166 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcchhhHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999654433222 11126789
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh-ccchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhc
Q psy14114 189 LRIAQSEFDRQAEITKLLLEGVQT-SHTSHLRCLHEFVEAQVNYYANCHKIMQ-DLKNELS 247 (248)
Q Consensus 189 l~~a~~~fe~~~e~~~~~m~~i~~-~e~e~~~~L~~lv~aQ~~y~~~~~~~L~-~l~~~l~ 247 (248)
|..++..|..+.-++...|..+.. ...+++..|..|+.+|.+||++|++.+. ++.|++.
T Consensus 167 l~~~Rk~f~~~~ldyv~~l~~l~~kk~~e~le~l~~~~~a~~~ff~~g~e~~~~~~~p~~~ 227 (265)
T 2q12_A 167 VYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLA 227 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999888888887776 4789999999999999999999999995 9988764
No 8
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=99.77 E-value=1e-17 Score=150.79 Aligned_cols=195 Identities=11% Similarity=0.164 Sum_probs=160.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCCCCCchhHHHHHHHHhcccC----CCCCcHHHHH
Q psy14114 36 ESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPSRLSNLEYLGLDMTEAGNAF----GPGTTYGTAL 111 (248)
Q Consensus 36 ~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~~~~~~~~Lg~~m~~~~~~~----~~~s~~g~aL 111 (248)
..+|..++.++.++.+|++.++.+.... .. .......|+.++.+++... ..|..++.+|
T Consensus 24 ~~~E~~~~~l~~~l~kl~k~~~~~~~a~-----~~------------~~~a~~~f~~~L~~~~~~~~~~~~~d~~v~~~l 86 (385)
T 2q13_A 24 GVFEEDATAISNYMNQLYQAMHRIYDAQ-----NE------------LSAATHLTSKLLKEYEKQRFPLGGDDEVMSSTL 86 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH------------HHHHHHHHHHHHHTTTTSCCCC---CCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH------------HHHHHHHHHHHHHHHhhhccCCCCCcHHHHHHH
Confidence 5789999999999999999998775520 00 0012477888888877642 2456688999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHhhcccccc---ccchHHH
Q psy14114 112 IKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKRLDLDSCKNRVRKARSLLGT---QSNAERD 188 (248)
Q Consensus 112 ~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~Daak~k~~kak~~~~~---~~~~e~e 188 (248)
..||.+...|+..+..+...++..|+.||.+|++.+|+.+.+.||++++.+.+||++++|+.+.++.+.. ..+++.+
T Consensus 87 ~~f~~~~~ei~~~~~~l~~~~~~~~~~PL~~f~~~di~~~ke~kk~fek~~~~yd~al~k~~~~~k~k~~e~~~~ea~~~ 166 (385)
T 2q13_A 87 QQFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILTLKEVFQIASNDHDAAINRYSRLSKKRENDKVKYEVTED 166 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCchhhHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999999997655433221 1126688
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhh-ccchhHHHHHHHHHHHHHHHHHHHHHHH-HHHHhhc
Q psy14114 189 LRIAQSEFDRQAEITKLLLEGVQT-SHTSHLRCLHEFVEAQVNYYANCHKIMQ-DLKNELS 247 (248)
Q Consensus 189 l~~a~~~fe~~~e~~~~~m~~i~~-~e~e~~~~L~~lv~aQ~~y~~~~~~~L~-~l~~~l~ 247 (248)
|..++..|..+.-++...|..+.. ...+++..|..|+.+|+.||.+|++.+. ++.+++.
T Consensus 167 l~~~rk~f~~~~ldy~~~l~~l~~rk~~e~le~l~~~~~a~~~ff~~g~~~~~~~~~~~~~ 227 (385)
T 2q13_A 167 VYTSRKKQHQTMMHYFCALNTLQYKKKIALLEPLLGYMQAQISFFKMGSENLNEQLEEFLA 227 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999988888776 4688999999999999999999999984 7777653
No 9
>4h8s_A DCC-interacting protein 13-beta; BAR domain, pleckstrin homology domain, adaptor protein, RAB signaling protein; 3.50A {Homo sapiens}
Probab=99.52 E-value=1.1e-12 Score=118.70 Aligned_cols=196 Identities=10% Similarity=0.131 Sum_probs=153.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCCCCCchhHHHHHHHHhcccC----CCCCcHHH
Q psy14114 34 HFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPSRLSNLEYLGLDMTEAGNAF----GPGTTYGT 109 (248)
Q Consensus 34 e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~~~~~~~~Lg~~m~~~~~~~----~~~s~~g~ 109 (248)
-...+|.+++.++.+++++++.++.+...- + .+.. ....|+.++...+... ..|..+..
T Consensus 45 ~l~~~E~~~~~l~~~l~kl~k~~~~~~~~~---~---~~~~-----------a~~~f~~~l~~~~~~~~~~~~~d~~~~~ 107 (407)
T 4h8s_A 45 LLSVFEEDAGTLTDYTNQLLQAMQRVYGAQ---N---EMCL-----------ATQQLSKQLLAYEKQNFALGKGDEEVIS 107 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H---HHHH-----------HHHHHHHHHTTGGGSCCC----CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H---HHHH-----------HHHHHHHHHHHhhhccccccCCcHHHHH
Confidence 347789999999999999999998876530 0 0000 1245555555544321 22445778
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHhhccccccc---cchH
Q psy14114 110 ALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKRLDLDSCKNRVRKARSLLGTQ---SNAE 186 (248)
Q Consensus 110 aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~Daak~k~~kak~~~~~~---~~~e 186 (248)
+|..|+.+...+...+..+...+...++.||.+|++.+|+.+...||++++..-+||++..|+.+.++.+... .+..
T Consensus 108 ~l~~f~~~~~ei~~~~~~L~~~~~~~i~~pL~~f~k~di~~~ke~kK~Fek~~~~Yd~~l~Ky~~~~k~k~~~~~~~e~~ 187 (407)
T 4h8s_A 108 TLHYFSKVVDELNLLHTELAKQLADTMVLPIIQFREKDLTEVSTLKDLFGLASNEHDLSMAKYSRLPKKKENEKVKTEVG 187 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSTTCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchHHHHHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999987654332211 1145
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhh-ccchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhh
Q psy14114 187 RDLRIAQSEFDRQAEITKLLLEGVQT-SHTSHLRCLHEFVEAQVNYYANCHKIM-QDLKNEL 246 (248)
Q Consensus 187 ~el~~a~~~fe~~~e~~~~~m~~i~~-~e~e~~~~L~~lv~aQ~~y~~~~~~~L-~~l~~~l 246 (248)
.++..++..|..+.-++...|..+.. ...+.+..|..|+.+|..||..+++.+ .++.+++
T Consensus 188 ~~l~~~Rk~f~~asldyv~~l~~lq~rk~~e~le~l~~~~~a~~~~f~~~~~~~~~~~~~~~ 249 (407)
T 4h8s_A 188 KEVAAARRKQHLSSLQYYCALNALQYRKQMAMMEPMIGFAHGQINFFKKGAEMFSKRMDSFL 249 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67888999999988888888888776 478899999999999999999999986 4455543
No 10
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=99.25 E-value=1.8e-09 Score=89.08 Aligned_cols=197 Identities=13% Similarity=0.173 Sum_probs=156.8
Q ss_pred cccCChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCCCCCchhHHHHHHHHhcccCCCCCcH
Q psy14114 28 KTELDAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPSRLSNLEYLGLDMTEAGNAFGPGTTY 107 (248)
Q Consensus 28 kTel~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~~~~~~~~Lg~~m~~~~~~~~~~s~~ 107 (248)
+| +|.|+..--..+..+...|..|++.++.|.+. ++. +.. ....||+++.+.|.. ++.+
T Consensus 3 rt-vD~EL~~klE~l~~~q~~Y~~L~~~~~~l~~~---------~~~-l~q-------tq~~lG~~f~~l~~~---~p~l 61 (224)
T 1i4d_A 3 RT-VDLELELQIELLRETKRKYESVLQLGRALTAH---------LYS-LLQ-------TQHALGDAFADLSQK---SPEL 61 (224)
T ss_dssp CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHH-HHH-------HHHHHHHHHHHHHHT---CGGG
T ss_pred cc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHH-HHH-------HHHHHHHHHHHHHhh---CcHH
Confidence 44 78888888888888999999999999998762 111 111 257999999998885 3468
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHhhccc--ccc----
Q psy14114 108 GTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKRLDLDSCKNRVRKARSL--LGT---- 181 (248)
Q Consensus 108 g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~Daak~k~~kak~~--~~~---- 181 (248)
|..+..+|+++..++.-...+..++. .|+..|++|++.-|++-....++.++.|.+||+.+..++....+ +.+
T Consensus 62 ~~~f~~~~~~~r~~~k~g~~Ll~~L~-~f~s~l~T~~~kaI~DT~lTIk~ye~aR~EY~ay~~~~ee~~~~~~~~~~l~r 140 (224)
T 1i4d_A 62 QEEFGYNAETQKLLCKNGETLLGAVN-FFVSSINTLVTKTMEDTLMTVKQYEAARLEYDAYRTDLEELSLGPRDAGTRGR 140 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-----------
T ss_pred HHHHHHHHHHHHHHHHhHHHHHHHHH-HHHHHHHHHHhHhccHHHHHHHHHHHHhHhHHHHHhhHHHhhcccccccchhh
Confidence 99999999999999999999998885 89999999999999999999999999999999999988755422 111
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhHH-HHHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14114 182 QSNAERDLRIAQSEFDRQAEITKLLLEGVQTSHTSHLR-CLHEFVEAQVNYYANCHKIMQDLKNEL 246 (248)
Q Consensus 182 ~~~~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~e~~~-~L~~lv~aQ~~y~~~~~~~L~~l~~~l 246 (248)
...+...+..++.+|+.-..++..-|.=+-.++...+. +|..|+.+-..||..+.+.|++...++
T Consensus 141 ve~~q~~~~~ak~kf~kLR~DV~~KleLLd~~r~kv~~~qL~~~~~al~~y~~~~~~~l~~~~~~f 206 (224)
T 1i4d_A 141 LESAQATFQAHRDKYEKLRGDVAIKLKFLEENKIKVMHKQLLLFHNAVSAYFAGNQKQLEQTLQQF 206 (224)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHhC
Confidence 11256688899999999998888777655567777777 999999999999999999997766443
No 11
>4akv_A Sorting nexin-33; transport protein, organelle biogenesis; 2.65A {Homo sapiens}
Probab=98.63 E-value=2.8e-06 Score=76.09 Aligned_cols=198 Identities=10% Similarity=0.141 Sum_probs=132.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCCCCCchhHHHHHHHHhcccCC-----CCCc
Q psy14114 32 DAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPSRLSNLEYLGLDMTEAGNAFG-----PGTT 106 (248)
Q Consensus 32 ~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~~~~~~~~Lg~~m~~~~~~~~-----~~s~ 106 (248)
+..+.+.+..++..+..+.++...+.....- . +.+..+..+ ........||.++...|..+. ....
T Consensus 180 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-----~-~~~~~r~~~---~~~~e~~~l~~~l~~l~~~~~~~~~~~~~~ 250 (386)
T 4akv_A 180 HQDLQDVEDRVDTFKAFSKKMDDSVLQLSTV-----A-SELVRKHVG---GFRKEFQKLGSAFQAISHSFQMDPPFCSEA 250 (386)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----H-HHHHHHHHT---HHHHHHHHHHHHHHHHHHHTTSSGGGSCHH
T ss_pred ccChhhHHHHHHHHHHHHHHHHHHHHHHHHH-----H-HHHHHHHHh---HHHHHHHHHHHHHHHHHHHHhhccccccHH
Confidence 3457788888888888777777766553220 0 001111000 000012457777777666432 2457
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHH-hhccccccccch
Q psy14114 107 YGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKRLDLDSCKNRVR-KARSLLGTQSNA 185 (248)
Q Consensus 107 ~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~Daak~k~~-kak~~~~~~~~~ 185 (248)
++.+|..+|.++..|+.....+...-...|.+||..++. .+..+...-....+....|..+. |+. ++|. .
T Consensus 251 Ls~aL~~l~~~~e~i~~l~~~Qa~~d~~~L~E~L~~Y~~-ll~s~Kdll~~R~~aL~k~~ea~-kl~~~~K~-------~ 321 (386)
T 4akv_A 251 LNSAISHTGRTYEAIGEMFAEQPKNDLFQMLDTLSLYQG-LLSNFPDIIHLQKGAFAKVKESQ-RMSDEGRM-------V 321 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTTHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHTTSS-------C
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHH-HHHHhCCc-------c
Confidence 999999999999999999998888777889999987776 44333322222222333444443 221 1111 2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhhcc-chhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14114 186 ERDLRIAQSEFDRQAEITKLLLEGVQTSH-TSHLRCLHEFVEAQVNYYANCHKIMQDLKNELS 247 (248)
Q Consensus 186 e~el~~a~~~fe~~~e~~~~~m~~i~~~e-~e~~~~L~~lv~aQ~~y~~~~~~~L~~l~~~l~ 247 (248)
..+++.++.+|+.....+...|..+-... .+.-..|.+|++.|..||++..+.|+.+.+.++
T Consensus 322 ~~~~~e~~~r~e~IS~~~~~El~rF~~~Rv~Dfk~~l~eyle~qi~~~~~~~~~le~~l~~f~ 384 (386)
T 4akv_A 322 QDEADGIRRRCRVVGFALQAEMNHFHQRRELDFKHMMQNYLRQQILFYQRVGQQLEKTLRMYD 384 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 35778899999999999999999998764 555559999999999999999999999998876
No 12
>3dyt_A Sorting nexin-9; 3-helix bundle, BAR domain, PX domain, phosphoprotein, protein transport, SH3 domain, transport, transport protein; 2.08A {Homo sapiens} PDB: 3dyu_A 2raj_A 2rai_A 2rak_A*
Probab=98.56 E-value=3e-06 Score=75.38 Aligned_cols=196 Identities=8% Similarity=0.102 Sum_probs=128.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCCCCCchhHHHHHHHHhccc--C---CCCCc
Q psy14114 32 DAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPSRLSNLEYLGLDMTEAGNA--F---GPGTT 106 (248)
Q Consensus 32 ~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~~~~~~~~Lg~~m~~~~~~--~---~~~s~ 106 (248)
+.++.+.+..++..+..+..|...+.....- .. .+..+..+ ........||.++...|.. + .....
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~-----~~-~~~~~~~~---~~~~~~~~l~~~l~~l~~~~~~~~~~~~~~ 230 (366)
T 3dyt_A 160 DLDLVEIEQKCEAVGKFTKAMDDGVKELLTV-----GQ-EHWKRCTG---PLPKEYQKIGKALQSLATVFSSSGYQGETD 230 (366)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH-HHHHHHHT---HHHHHHHHHHHHHHHHHHHHHTTCCGGGHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HH-HHHHHHHh---HHHHHHHHHHHHHHHHHHHHhhccccccHH
Confidence 4457778888887777777777766554221 00 00000000 0000135667776666653 2 12356
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHH---HHHHHHHhhHhhhhhhhHHHHHHHHhhcccccccc
Q psy14114 107 YGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEM---KTIVKERSLLESKRLDLDSCKNRVRKARSLLGTQS 183 (248)
Q Consensus 107 ~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~---~~i~~~rkkl~~~RLd~Daak~k~~kak~~~~~~~ 183 (248)
++.+|..+|+++..|+.....+...-...+.+||..++. .+ +++-..|+ +....|..+. |+. .+.+.
T Consensus 231 L~~al~~l~~~~~~i~~l~~~qa~~d~~~l~E~L~~Y~~-~l~avKd~l~~r~---~aL~k~~e~~-kl~----~~~K~- 300 (366)
T 3dyt_A 231 LNDAITEAGKTYEEIASLVAEQPKKDLHFLMECNHEYKG-FLGCFPDIIGTHK---GAIEKVKESD-KLV----ATSKI- 300 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSGGGTHHHHHHHHHHHHH-HHTTHHHHHHHHH---HHHHHHHTHH-HHH----HTTSS-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHH-HHHHHHHHHHHHH---HHHHHHHHHH-HHH----hccCc-
Confidence 999999999999999999888877767788888887765 43 33333333 2222222221 111 01111
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhccc-hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14114 184 NAERDLRIAQSEFDRQAEITKLLLEGVQTSHT-SHLRCLHEFVEAQVNYYANCHKIMQDLKNELS 247 (248)
Q Consensus 184 ~~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~-e~~~~L~~lv~aQ~~y~~~~~~~L~~l~~~l~ 247 (248)
...+++.++.+|+.....+...|..+-.... +.-..|.+|+..|..||++..+.|+.+.+.++
T Consensus 301 -~~~~~~~~~~r~e~is~~~~~El~rF~~~r~~Dfk~~l~~yl~~qi~~~k~~~~~w~~~l~~~~ 364 (366)
T 3dyt_A 301 -TLQDKQNMVKRVSIMSYALQAEMNHFHSNRIYDYNSVIRLYLEQQVQFYETIAEKLRQALSRFP 364 (366)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred -chhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 2357889999999999999999999987644 55559999999999999999999999988775
No 13
>2ykt_A Brain-specific angiogenesis inhibitor 1-associate protein 2; signaling protein, NPY motif, binding pocket; 2.11A {Homo sapiens} PDB: 1y2o_A 1wdz_A
Probab=98.20 E-value=0.00061 Score=57.34 Aligned_cols=143 Identities=13% Similarity=0.164 Sum_probs=96.6
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhH----hhhhhhhHHHHHHHHhhc----
Q psy14114 105 TTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLL----ESKRLDLDSCKNRVRKAR---- 176 (248)
Q Consensus 105 s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl----~~~RLd~Daak~k~~kak---- 176 (248)
-.+|.+|..++..+..|..-+..+...+...++.||..-++.+.+.+....|+. .+++-+++-+.+.+.|..
T Consensus 73 ~elG~~L~~i~~~~r~ie~~l~~~~~~~~~~li~pL~~kie~d~K~v~~~~K~~~~e~k~~~~~l~K~~~e~~kl~KK~k 152 (253)
T 2ykt_A 73 KELGDVLFQMAEVHRQIQNQLEEMLKSFHNELLTQLEQKVELDSRYLSAALKKYQTEQRSKGDALDKCQAELKKLRKKSQ 152 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHhHhHHHHHHHHHHHHHhhcc
Confidence 479999999999999999999999999999999999999999999888775544 567888888876554321
Q ss_pred ccccc-c--c---chHHHHHHHHHHHHHHHHH-HHHHHHhhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14114 177 SLLGT-Q--S---NAERDLRIAQSEFDRQAEI-TKLLLEGVQTSHTSHLRCLHEFVEAQVNYYANCHKIMQDLKNELS 247 (248)
Q Consensus 177 ~~~~~-~--~---~~e~el~~a~~~fe~~~e~-~~~~m~~i~~~e~e~~~~L~~lv~aQ~~y~~~~~~~L~~l~~~l~ 247 (248)
+++.. . . ..-+++...+..+++.... ++..|..--..-.-.+..+..|++..+.||.++.++|....+.|.
T Consensus 153 ~gk~~~~~~~~~~~~~e~v~~~~~~le~~~~~~lr~aL~EERrRycflv~~~~~v~~~~~~~h~~~~~~L~~~l~~w~ 230 (253)
T 2ykt_A 153 GSKNPQKYSDKELQYIDAISNKQGELENYVSDGYKTALTEERRRFCFLVEKQCAVAKNSAAYHSKGKELLAQKLPLWQ 230 (253)
T ss_dssp ----CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHH
Confidence 11111 0 0 1222333334444433221 222221111112344567889999999999999999999888775
No 14
>3ok8_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 2; I-BAR, protein binding; 2.25A {Mus musculus}
Probab=97.82 E-value=0.009 Score=48.91 Aligned_cols=140 Identities=9% Similarity=0.133 Sum_probs=94.6
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHh----hhhhhhHHHHHHHHhhccccc
Q psy14114 105 TTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLE----SKRLDLDSCKNRVRKARSLLG 180 (248)
Q Consensus 105 s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~----~~RLd~Daak~k~~kak~~~~ 180 (248)
-.+|.+|..+++.+..|..-...+.......+|.||..-++.|.+-++..+|+.. .+.-.|+-|.+.++|..+...
T Consensus 71 keLG~vL~qis~~hR~i~~~le~~~k~f~~elI~pLE~k~e~D~k~i~~~~K~y~~e~k~~~~~leK~~~elkK~~rksq 150 (222)
T 3ok8_A 71 QILGEILVQMSDTQRHLNSDLEVVVQTFHGDLLQHMEKNTKLDMQFIKDSCQHYEIEYRHRAANLEKCMSELWRMERKRD 150 (222)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHhhhhhc
Confidence 4699999999999999999999999999999999999999999999998887554 355568888878766532211
Q ss_pred ccc-chHHHHHHHHHHHHHHHH-HHHHHHHhhhhc--cch-hHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14114 181 TQS-NAERDLRIAQSEFDRQAE-ITKLLLEGVQTS--HTS-HLRCLHEFVEAQVNYYANCHKIMQDLKNELS 247 (248)
Q Consensus 181 ~~~-~~e~el~~a~~~fe~~~e-~~~~~m~~i~~~--e~e-~~~~L~~lv~aQ~~y~~~~~~~L~~l~~~l~ 247 (248)
+.. ...+.+..-+.+++.-.. -.+..| ++- +.- .++.-..|+..-+.||.++.++|.+-.|.|.
T Consensus 151 k~~~k~~e~v~~~q~el~~f~~~s~r~Al---~EErRRYcFL~ekhc~~~~~~~~~h~k~~~~L~~kl~~W~ 219 (222)
T 3ok8_A 151 KNAREMKESVNRLHAQMQAFVSESKRAAE---LEEKRRYRFLAEKHLLLSNTFLQFLGRARGMLQNRVLLWK 219 (222)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred cChHHHHHHHHHHHhHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccchhhh
Confidence 110 012223223333332221 111111 110 111 1123478899999999999999999999886
No 15
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=97.47 E-value=0.025 Score=47.30 Aligned_cols=139 Identities=14% Similarity=0.225 Sum_probs=83.9
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHh----hHhhhhhhhHHHHHHHH----hhc
Q psy14114 105 TTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERS----LLESKRLDLDSCKNRVR----KAR 176 (248)
Q Consensus 105 s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rk----kl~~~RLd~Daak~k~~----kak 176 (248)
-.+|.+|..++..+..|..-+..+...+...++.||..-++.+.+.+....| .+.+.|-+...+..... |++
T Consensus 76 ~elG~~L~~i~~~hr~ie~~l~~~~k~~~~eli~pLe~k~e~d~k~~~~~~K~~~~~~k~~r~elkk~~~~~~k~qkK~r 155 (253)
T 2d1l_A 76 REIGSALTRMCMRHRSIEAKLRQFSSALIDCLINPLQEQMEEWKKVANQLDKDHAKEYKKARQEIKKKSSDTLKLQKKAK 155 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence 4699999999999999999999999999999999999999988888886554 33444555444444432 222
Q ss_pred cc--ccccc---chHHHHHH---HHHHHHHHHHHHHHHHHhhh-hc---cchhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14114 177 SL--LGTQS---NAERDLRI---AQSEFDRQAEITKLLLEGVQ-TS---HTSHLRCLHEFVEAQVNYYANCHKIMQDLKN 244 (248)
Q Consensus 177 ~~--~~~~~---~~e~el~~---a~~~fe~~~e~~~~~m~~i~-~~---e~e~~~~L~~lv~aQ~~y~~~~~~~L~~l~~ 244 (248)
+. .++.. .+..++.. -...++...... +.+.+ +- -.-.+..|..+++.++.|+... ..|..+.+
T Consensus 156 k~~~~gk~~~~~~l~~a~q~v~~~~~~le~~~~~~---~r~AL~EERrRycflv~~l~pv~~~e~~~~~e~-~~l~~~l~ 231 (253)
T 2d1l_A 156 KVDAQGRGDIQPQLDSALQDVNDKYLLLEETEKQA---VRKALIEERGRFCTFISMLRPVIEEEISMLGEI-THLQTISE 231 (253)
T ss_dssp CGGGTTTTSHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGH-HHHHHHHH
T ss_pred cccccCCCcchHHHHHHHHHHHHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHhHHHHHHHHHhhhH-HHHHHHHH
Confidence 21 01111 12233322 222333322111 22211 11 1334456667777788888755 56666666
Q ss_pred hhc
Q psy14114 245 ELS 247 (248)
Q Consensus 245 ~l~ 247 (248)
.|.
T Consensus 232 ~~~ 234 (253)
T 2d1l_A 232 DLK 234 (253)
T ss_dssp HHH
T ss_pred HHH
Confidence 653
No 16
>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}
Probab=96.91 E-value=0.23 Score=45.33 Aligned_cols=71 Identities=8% Similarity=0.049 Sum_probs=51.7
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHH-----------------------------HHHHHHHH
Q psy14114 105 TTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGE-----------------------------MKTIVKER 155 (248)
Q Consensus 105 s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~-----------------------------~~~i~~~r 155 (248)
.++..++..+-.....++..+..+...+...++.||..+.... ++.+.++|
T Consensus 77 gtl~~aw~~~~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~e~~~K~~~~~~kerK~~~~~~~k~qk~l~~~~~~l~KaK 156 (486)
T 3haj_A 77 GTVEKAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAK 156 (486)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCBCSSSSBHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3566777777777888899999999999999999999887621 13445566
Q ss_pred hhHhhhhhhhHHHHHHHHhh
Q psy14114 156 SLLESKRLDLDSCKNRVRKA 175 (248)
Q Consensus 156 kkl~~~RLd~Daak~k~~ka 175 (248)
++.+.+..+++.++.+..++
T Consensus 157 k~Y~~~cke~e~a~~~~~~a 176 (486)
T 3haj_A 157 KAHHAACKEEKLAISREANS 176 (486)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHh
Confidence 66666666677776666554
No 17
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=96.85 E-value=0.15 Score=44.46 Aligned_cols=40 Identities=10% Similarity=0.060 Sum_probs=33.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHH
Q psy14114 106 TYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLE 145 (248)
Q Consensus 106 ~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~ 145 (248)
++..++..+-.....+|..+..+...+...++.||..+..
T Consensus 85 tl~~aw~~l~~e~e~~a~~H~~la~~L~~~v~~~l~~~~~ 124 (350)
T 3aco_A 85 TVEKAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQK 124 (350)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777778888999999999999999999997754
No 18
>4dyl_A Tyrosine-protein kinase FES/FPS; structural genomics, structural genomics consortium, BCR, CR associated substrate, transferase; 2.18A {Homo sapiens}
Probab=96.76 E-value=0.093 Score=46.91 Aligned_cols=90 Identities=10% Similarity=0.033 Sum_probs=55.0
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCCCCCchhHHHHHHHHhccc--------CCC
Q psy14114 32 DAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPSRLSNLEYLGLDMTEAGNA--------FGP 103 (248)
Q Consensus 32 ~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~~~~~~~~Lg~~m~~~~~~--------~~~ 103 (248)
+..|..|.++++.=..+++.|.+=.+. |+. + ....|..|...+.. ..+
T Consensus 11 ~~gf~~L~kr~~~g~~lledl~~F~re--------RA~--I--------------E~eYAk~L~kLakk~~~k~~~~~~~ 66 (406)
T 4dyl_A 11 PQGHGVLQQMQEAELRLLEGMRKWMAQ--------RVK--S--------------DREYAGLLHHMSLQDSGGQSRAISP 66 (406)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHH--H--------------HHHHHHHHHHHC------------C
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHH--------HHH--H--------------HHHHHHHHHHHHHHHhcccccCCCC
Confidence 347888888888877777776653331 111 1 11222222222111 112
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHH
Q psy14114 104 GTTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLE 145 (248)
Q Consensus 104 ~s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~ 145 (248)
.+++..+...+-..-..+|..+..+...+...++.||..+..
T Consensus 67 ~~tl~~aW~~ll~ete~~a~~H~~lae~L~~~v~~~l~~~~k 108 (406)
T 4dyl_A 67 DSPISQSWAEITSQTEGLSRLLRQHAEDLNSGPLSKLSLLIR 108 (406)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 245667777777777788888998888888888888887766
No 19
>2efl_A Formin-binding protein 1; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.61A {Homo sapiens} SCOP: a.238.1.4
Probab=96.66 E-value=0.24 Score=41.79 Aligned_cols=69 Identities=13% Similarity=0.179 Sum_probs=47.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHHHH----------------------HHHHHHhhHhhhhh
Q psy14114 106 TYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGEMK----------------------TIVKERSLLESKRL 163 (248)
Q Consensus 106 ~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~~~----------------------~i~~~rkkl~~~RL 163 (248)
++..+...+-.....+|..+..+...+...++.||..+.. ++. .+.++|++.....-
T Consensus 73 t~~~aw~~~~~~~e~~a~~h~~~a~~l~~~v~~~l~~~~~-~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaK~~Y~~~~~ 151 (305)
T 2efl_A 73 TSCKAFISNLNEMNDYAGQHEVISENMASQIIVDLARYVQ-ELKQERKSNFHDGRKAQQHIETCWKQLESSKRRFERDCK 151 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666666778888888888888899999988876 333 34445666666666
Q ss_pred hhHHHHHHHHhh
Q psy14114 164 DLDSCKNRVRKA 175 (248)
Q Consensus 164 d~Daak~k~~ka 175 (248)
+++.++.+..++
T Consensus 152 e~e~a~~~~~~~ 163 (305)
T 2efl_A 152 EADRAQQYFEKM 163 (305)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 666666666544
No 20
>2efk_A CDC42-interacting protein 4; EFC domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.30A {Homo sapiens} SCOP: a.238.1.4
Probab=96.65 E-value=0.25 Score=41.75 Aligned_cols=71 Identities=8% Similarity=0.146 Sum_probs=52.7
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHH---------------------HHHHHHHHHhhHhhhhh
Q psy14114 105 TTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEG---------------------EMKTIVKERSLLESKRL 163 (248)
Q Consensus 105 s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~---------------------~~~~i~~~rkkl~~~RL 163 (248)
.++..+...+-.....+|..+..+...+...++.||..|... -+.++.++|++.+...-
T Consensus 65 ~t~~~~w~~~l~~~e~~a~~h~~~a~~L~~~v~~~l~~~~~~~~~~rK~~~~~~~k~~k~~~~~~~~l~KaKk~Y~~~~~ 144 (301)
T 2efk_A 65 FSQQQSFVQILQEVNDFAGQRELVAENLSVRVCLELTKYSQEMKQERKMHFQEGRRAQQQLENGFKQLENSKRKFERDCR 144 (301)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356667777777777888999999999988899999888752 23455667777777777
Q ss_pred hhHHHHHHHHhh
Q psy14114 164 DLDSCKNRVRKA 175 (248)
Q Consensus 164 d~Daak~k~~ka 175 (248)
+++.++.+..++
T Consensus 145 e~e~a~~~~~~a 156 (301)
T 2efk_A 145 EAEKAAQTAERL 156 (301)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhh
Confidence 777777776655
No 21
>3caz_A BAR protein; thermo-acidophilic RED ALGA, protein structure initiative, PSI, center for eukaryotic structural genomics, signaling protein; 3.34A {Galdieria sulphuraria}
Probab=96.39 E-value=0.07 Score=42.37 Aligned_cols=112 Identities=15% Similarity=0.155 Sum_probs=77.9
Q ss_pred HhhHhHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHhhcc---ccccccchHHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14114 135 SFVQPLQKFLEGEMKTIVKERSLLESKRLDLDSCKNRVRKARS---LLGTQSNAERDLRIAQSEFDRQAEITKLLLEGVQ 211 (248)
Q Consensus 135 ~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~Daak~k~~kak~---~~~~~~~~e~el~~a~~~fe~~~e~~~~~m~~i~ 211 (248)
..++.++.+.. .|.++..+-+.++.-||-||--|-|+....+ +..+...-...+..|++.|...+-+...-|.+++
T Consensus 102 rllekiqkyfQ-~IEtlK~ql~nf~e~RLiYDHYKlKvdELEK~~KdSeKI~RNQsKLssAEtaYkqvcsDiInkMnkll 180 (294)
T 3caz_A 102 RLLEKIQKYRQ-EIEEIKKEYKETDKYRERYDHYKVKLDNLEKKNKDQERIERNQQKFKDAEAAYSSVCADLIQKMETVW 180 (294)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHhhhHHHHHHHHHHHHhHHHHHhccchHHHHHHhHHHhhhHHHHHHHHHHHHHHHHHHHH
Confidence 45666666666 7888888899999999999999999864322 1111101234677888888888888888899999
Q ss_pred hccchhHHHH-HHHHHHHHHHHHHHHHHHHHHHHhhc
Q psy14114 212 TSHTSHLRCL-HEFVEAQVNYYANCHKIMQDLKNELS 247 (248)
Q Consensus 212 ~~e~e~~~~L-~~lv~aQ~~y~~~~~~~L~~l~~~l~ 247 (248)
.+....+..- ...-.-|+.|.+.--..-+-+.|+|+
T Consensus 181 ~n~~riineaasavwstqlqyakaleaaanpivpylq 217 (294)
T 3caz_A 181 KKHVSIFAEAASAVWSTQLQYAKALEAAANPIVPYLQ 217 (294)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGGGC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhhh
Confidence 8866666633 44446688887765555566666664
No 22
>2x3v_A Syndapin I, protein kinase C and casein kinase substrate in N protein 1; BAR, N-WAsp, dynamin, pacsin 1, endocytosis; 2.45A {Mus musculus} PDB: 2x3w_A 2x3x_A
Probab=96.37 E-value=0.43 Score=41.16 Aligned_cols=71 Identities=11% Similarity=0.069 Sum_probs=50.5
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHHH-----------------------------HHHHHHHHh
Q psy14114 106 TYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEGE-----------------------------MKTIVKERS 156 (248)
Q Consensus 106 ~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~~-----------------------------~~~i~~~rk 156 (248)
++..+...+-.....+|..+..+...+...++.||..+.... +.++.++|+
T Consensus 76 tl~~aw~~~~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~e~~~k~~~~~~ke~K~~~~~~~k~~k~~~~~~~~l~KaKk 155 (337)
T 2x3v_A 76 SLERAWGAMMTEADKVSELHQEVKNSLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKK 155 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCBCSSCSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355666677777778899999999999999999999876521 234556666
Q ss_pred hHhhhhhhhHHHHHHHHhhc
Q psy14114 157 LLESKRLDLDSCKNRVRKAR 176 (248)
Q Consensus 157 kl~~~RLd~Daak~k~~kak 176 (248)
+.+.+.-++|.|+....+++
T Consensus 156 ~Y~~~c~e~e~a~~~~~~~~ 175 (337)
T 2x3v_A 156 AYHLACKEERLAMTREMNSK 175 (337)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhHHhccc
Confidence 66777777777766665443
No 23
>3abh_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.00A {Homo sapiens} PDB: 3q0k_A 3lll_A 3hah_A 3qni_A 3hai_A 3q84_A
Probab=96.33 E-value=0.42 Score=40.70 Aligned_cols=69 Identities=9% Similarity=0.056 Sum_probs=49.2
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHH-----------------------------HHHHHHHHHh
Q psy14114 106 TYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEG-----------------------------EMKTIVKERS 156 (248)
Q Consensus 106 ~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~-----------------------------~~~~i~~~rk 156 (248)
.+..++..+-.....+|..+..+...+...++.||..+... -+..+.++|+
T Consensus 85 tl~~aw~~i~~e~e~~a~~H~~~a~~L~~~v~~~l~~~~~~~~~k~~~~~~ke~k~~~~~~~k~~k~~~~~~~~l~KaK~ 164 (312)
T 3abh_A 85 TVEKAWMAFMSEAERVSELHLEVKASLMNDDFEKIKNWQKEAFHKQMMGGFKETKEAEDGFRKAQKPWAKKLKEVEAAKK 164 (312)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCBCTTSSBHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 45566777777888899999999999999999999877652 1233555666
Q ss_pred hHhhhhhhhHHHHHHHHh
Q psy14114 157 LLESKRLDLDSCKNRVRK 174 (248)
Q Consensus 157 kl~~~RLd~Daak~k~~k 174 (248)
+.+...-+++.++.+..+
T Consensus 165 ~Y~~~c~e~e~a~~~~~~ 182 (312)
T 3abh_A 165 AHHAACKEEKLAISREAN 182 (312)
T ss_dssp HHHHHHHHHHHHTTHHHH
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 666666666666655533
No 24
>3g9g_A Suppressor of yeast profilin deletion; SYP1, BAR domain, FCH, adaptor, endocytosis, phosphoprotein; 2.40A {Saccharomyces cerevisiae}
Probab=95.99 E-value=0.44 Score=40.50 Aligned_cols=121 Identities=17% Similarity=0.196 Sum_probs=82.0
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHHH--HHHHHHHHHhhHhhhhhhhHHHHHHHHhhcccccccc
Q psy14114 106 TYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLEG--EMKTIVKERSLLESKRLDLDSCKNRVRKARSLLGTQS 183 (248)
Q Consensus 106 ~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~~--~~~~i~~~rkkl~~~RLd~Daak~k~~kak~~~~~~~ 183 (248)
.+..+...+-.....++.++..+...+...++.||++|.+. .+.+..+.-.+|+..--.+|.++.| .+
T Consensus 119 ~l~~~W~~v~~e~e~~a~~H~~la~~L~~ev~~pL~~~~e~~~~~~e~~~l~~~L~~~ak~le~~~kk------~~---- 188 (287)
T 3g9g_A 119 ELRNVWDTVIEELKSDLKSSTEYYNTLDQQVVRELKESVENNTSWRESKDLHSKLSKNAASIEHYSKN------NE---- 188 (287)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHCSSSSCHHHHHHHHHHHHHHHHHHHHHHCSSC------CS----
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHhh------HH----
Confidence 45566667777778899999999999999999999999863 4555444444444444344443311 11
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhHH-HHHHHHHHHHHHHHHHHH
Q psy14114 184 NAERDLRIAQSEFDRQAEITKLLLEGVQTSHTSHLR-CLHEFVEAQVNYYANCHK 237 (248)
Q Consensus 184 ~~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~e~~~-~L~~lv~aQ~~y~~~~~~ 237 (248)
+...++.++..++...-.+...+..+-..+..++. .|..|......|+....+
T Consensus 189 -a~~~le~a~~qWes~aP~~fe~fQ~lEEeRL~~Lkd~L~~y~~~~sd~~~~~~~ 242 (287)
T 3g9g_A 189 -NSSHLEEARRQWDQQSPYLFELFETIDYNRLDTLKNCMLRFQTSFSDYLLNTTK 242 (287)
T ss_dssp -CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33467888888887776666666666666677776 677788777777776333
No 25
>3i2w_A Syndapin, LD46328P; EFC, FBAR, SH3 domain, endocytosis; 2.67A {Drosophila melanogaster}
Probab=95.95 E-value=0.62 Score=39.21 Aligned_cols=40 Identities=8% Similarity=0.056 Sum_probs=32.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHH
Q psy14114 106 TYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLE 145 (248)
Q Consensus 106 ~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~ 145 (248)
++..++..+-.....+|..+..+...+...++.||..+..
T Consensus 64 s~~~aw~~~~~~~e~~a~~h~~~a~~l~~~v~~~l~~~~~ 103 (290)
T 3i2w_A 64 TTEAAWKGVLTESERISDVHMKIKDNLCNDVNSQIKTWQK 103 (290)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4555666666777788999999999999999999998876
No 26
>3qwe_A GMIP, GEM-interacting protein; structural genomics consortium, SGC, protein binding; 2.40A {Homo sapiens}
Probab=95.74 E-value=0.64 Score=39.32 Aligned_cols=97 Identities=6% Similarity=0.092 Sum_probs=58.9
Q ss_pred HHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHhh----------cccc-ccc--cchHHHHHHHHHH
Q psy14114 129 VNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKRLDLDSCKNRVRKA----------RSLL-GTQ--SNAERDLRIAQSE 195 (248)
Q Consensus 129 ~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~Daak~k~~ka----------k~~~-~~~--~~~e~el~~a~~~ 195 (248)
-..+...+..--++..+ -...+.++|.+...+--|||.+|+--.++ |..+ ... +++...++.|...
T Consensus 114 RK~~Ke~w~r~eKk~~d-ae~~l~KAK~~Y~~r~ee~ekak~~~~~~e~~q~~~~~~K~lek~r~~EEea~~K~eeAd~~ 192 (279)
T 3qwe_A 114 RKEFKEQWMKEQKRMNE-AVQALRRAQLQYVQRSEDLRARSQGSPEDSAPQASPGPSKQQERRRRSREEAQAKAQEAEAL 192 (279)
T ss_dssp HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHTCCCC-------------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHhcCCCccccccccccccchhhHHHhhHHHHHHHHHHHHHH
Confidence 33444444444344444 55677778888888888888777632211 0000 000 0134457778888
Q ss_pred HHHHHHHHHHHHHhhhhccchhHHHHHHHHH
Q psy14114 196 FDRQAEITKLLLEGVQTSHTSHLRCLHEFVE 226 (248)
Q Consensus 196 fe~~~e~~~~~m~~i~~~e~e~~~~L~~lv~ 226 (248)
|......+...-..+....+..+..|.++|.
T Consensus 193 Y~~~V~~a~~~r~eL~~tk~~~v~~Lr~LI~ 223 (279)
T 3qwe_A 193 YQACVREANARQQDLEIAKQRIVSHVRKLVF 223 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 8888877777766777777888989988875
No 27
>2v0o_A FCHO2, FCH domain only protein 2; lipid-binding protein, EFC domain, vesicle trafficking, membrane curvature, endocytosis, exocytosis, F-BAR domain; 2.30A {Homo sapiens}
Probab=95.30 E-value=1 Score=37.29 Aligned_cols=92 Identities=13% Similarity=0.158 Sum_probs=51.3
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhhcCCCCCCchhHHHHHHHHhcccCCCCCcHHHHH
Q psy14114 32 DAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEKKRPSRLSNLEYLGLDMTEAGNAFGPGTTYGTAL 111 (248)
Q Consensus 32 ~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~~~~~~~~~~~~Lg~~m~~~~~~~~~~s~~g~aL 111 (248)
++.|..|.++++.=...++.|..-.+.= ..++.....+ ...|+..... + +...++..+.
T Consensus 17 ~~g~~~l~~~~~~g~~~~~el~~f~~eR------a~iE~eYak~-----------L~kLa~~~~~-~---~~~gs~~~~w 75 (276)
T 2v0o_A 17 NSGFDVLYHNMKHGQISTKELADFVRER------ATIEEAYSRS-----------MTKLAKSASN-Y---SQLGTFAPVW 75 (276)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHH-----------HHHHHHHHHT-S---CCCSSSGGGH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHH-----------HHHHHHhcCC-C---CCcchHHHHH
Confidence 5678888888877777777666544320 0011111101 1222222111 1 1122444555
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHH
Q psy14114 112 IKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLE 145 (248)
Q Consensus 112 ~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~ 145 (248)
..+-.....+|..+..+...++ .++.||..|..
T Consensus 76 ~~~~~~~e~~a~~h~~~a~~l~-~~~~~l~~~~~ 108 (276)
T 2v0o_A 76 DVFKTSTEKLANCHLDLVRKLQ-ELIKEVQKYGE 108 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 6665666678888888888884 78899988876
No 28
>3m3w_A Pacsin3, protein kinase C and casein kinase II substrate P; mouse, BAR domain, endocytosis; 2.60A {Mus musculus} PDB: 3syv_A 3qe6_A
Probab=94.49 E-value=2.1 Score=36.72 Aligned_cols=40 Identities=13% Similarity=0.045 Sum_probs=32.9
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHHHH
Q psy14114 106 TYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKFLE 145 (248)
Q Consensus 106 ~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~l~ 145 (248)
++..++..+-.....+|..+..+...+...++.||..|..
T Consensus 76 sl~~aw~~i~~e~e~~a~~H~~~a~~l~~~v~~~l~~~~k 115 (320)
T 3m3w_A 76 TLEKAWHAFFTAAERLSELHLEVREKLHGPDSERVRTWQR 115 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4556677777777888999999999999999999998763
No 29
>2q13_A DCC-interacting protein 13 alpha; APPL1, BAR domain, PH domain, BAR-PH domain, protein transpo; 2.05A {Homo sapiens} PDB: 2z0o_A 2elb_A
Probab=85.72 E-value=17 Score=31.57 Aligned_cols=118 Identities=4% Similarity=-0.005 Sum_probs=70.9
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhh---cCCCCCCchhHHHHHHHHhcccCCCCCcH
Q psy14114 31 LDAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEK---KRPSRLSNLEYLGLDMTEAGNAFGPGTTY 107 (248)
Q Consensus 31 l~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~---~~~~~~~~~~~Lg~~m~~~~~~~~~~s~~ 107 (248)
+..++..++..++.+.+.+.+++..+..|.... ..+.+.+.. ..+......+.++.+|. .+
T Consensus 26 ~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~------~~f~~~L~~~~~~~~~~~~~d~~v~~~l~----------~f 89 (385)
T 2q13_A 26 FEEDATAISNYMNQLYQAMHRIYDAQNELSAAT------HLTSKLLKEYEKQRFPLGGDDEVMSSTLQ----------QF 89 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHTTTTSCCCC---CCHHHHHHH----------HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHhhhccCCCCCcHHHHHHHH----------HH
Confidence 467888899999999999999999988886531 111122211 00111112344555553 34
Q ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhhhhh
Q psy14114 108 GTALIKVGQYEQK-LGAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKRLDL 165 (248)
Q Consensus 108 g~aL~~~g~a~~~-ia~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~ 165 (248)
|.++..++..... +.++...+..++..-+-.-|+.+-+ .=+.+.+.+++++...--|
T Consensus 90 ~~~~~ei~~~~~~l~~~~~~~~~~PL~~f~~~di~~~ke-~kk~fek~~~~yd~al~k~ 147 (385)
T 2q13_A 90 SKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILT-LKEVFQIASNDHDAAINRY 147 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHH
Confidence 5577777766666 4566666777776555555666554 5566667777777554444
No 30
>2q12_A DIP13 alpha, DCC-interacting protein 13 alpha; APPL1, BAR domain, protein transport; 1.79A {Homo sapiens} PDB: 2z0n_A
Probab=81.50 E-value=21 Score=29.28 Aligned_cols=120 Identities=5% Similarity=0.016 Sum_probs=70.7
Q ss_pred cCChHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchhHHHHHHhhh---c-CCCCCCchhHHHHHHHHhcccCCCCC
Q psy14114 30 ELDAHFESLAGRSDVTKLWTEKIVGDTAAVLTPNPGNRVEDFLFEKIEK---K-RPSRLSNLEYLGLDMTEAGNAFGPGT 105 (248)
Q Consensus 30 el~~e~~~lE~~~d~~k~~~~~l~k~~~~yl~~np~~r~~~~~~~k~~~---~-~~~~~~~~~~Lg~~m~~~~~~~~~~s 105 (248)
.+..+...++..++.+.+.+..++..+..|.... ..+.+.+.. . .+ ...+...++.+|.
T Consensus 25 ~~E~~~~~l~~~l~kl~k~~~~~~~a~~~~~~a~------~~f~~~L~~~~~~~~~-~~~~d~~~~~~L~---------- 87 (265)
T 2q12_A 25 VFEEDATAISNYMNQLYQAMHRIYDAQNELSAAT------HLTSKLLKEYEKQRFP-LGGDDEVMSSTLQ---------- 87 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHGGGGSCCC------CHHHHHHH----------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH------HHHHHHHHHHHhhhcc-CCCCcHHHHHHHH----------
Confidence 3567788899999999999999999999987631 112222211 0 01 1123345555554
Q ss_pred cHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhhhhhHH
Q psy14114 106 TYGTALIKVGQYEQKL-GAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKRLDLDS 167 (248)
Q Consensus 106 ~~g~aL~~~g~a~~~i-a~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~Da 167 (248)
.+|.++..++.....+ .++...+..++..=+-.-|+.+-+ .=+.+.+.+.+++...--|=.
T Consensus 88 ~f~~~l~ei~~~~~~l~~~~~~~~~~PL~~f~~~dlk~~ke-~kk~fdk~~~~yd~al~k~~~ 149 (265)
T 2q12_A 88 QFSKVIDELSSCHAVLSTQLADAMMFPITQFKERDLKEILT-LKEVFQIASNDHDAAINRYSR 149 (265)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhc
Confidence 3455666666665554 456666677766544455665554 556666667666655554443
No 31
>3ghg_A Fibrinogen alpha chain; triple-stranded coiled coil, beta sheets, alpha helices, AMY amyloidosis, blood coagulation, disease mutation, glycoprot phosphoprotein; HET: NAG NDG BMA MAN GAL SIA; 2.90A {Homo sapiens} PDB: 3h32_A* 2a45_G*
Probab=79.96 E-value=12 Score=34.27 Aligned_cols=48 Identities=6% Similarity=0.086 Sum_probs=37.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHHHHHHHHHH
Q psy14114 185 AERDLRIAQSEFDRQAEITKLLLEGVQTSHTSHLRCLHEFVEAQVNYYA 233 (248)
Q Consensus 185 ~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~e~~~~L~~lv~aQ~~y~~ 233 (248)
++..+...+.+.+.+. .-...|.+++..-..-|..|..=|.+|++|++
T Consensus 115 LRRrIqyLKekVdnQl-snIrvLQsnLedq~~kIQRLEvDIdiqirsCK 162 (562)
T 3ghg_A 115 LRSRIEVLKRKVIEKV-QHIQLLQKNVRAQLVDMKRLEVDIDIKIRSCR 162 (562)
T ss_dssp HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 6667777777777777 55567777777666677789999999999975
No 32
>1ic2_A Tropomyosin alpha chain, skeletal muscle; alpha-helical coiled coil, alanine, symmetry, axial stagger, BEND, contractIle protein; 2.00A {Gallus gallus} SCOP: h.1.5.1
Probab=55.36 E-value=43 Score=22.26 Aligned_cols=22 Identities=14% Similarity=0.286 Sum_probs=18.4
Q ss_pred HHHhhHhhhhhhhHHHHHHHHh
Q psy14114 153 KERSLLESKRLDLDSCKNRVRK 174 (248)
Q Consensus 153 ~~rkkl~~~RLd~Daak~k~~k 174 (248)
..++|+...+++.|.+..++..
T Consensus 3 ~ikkKm~~lk~e~d~a~~~~~~ 24 (81)
T 1ic2_A 3 AIKKKMQMLKLDKENALDRAEQ 24 (81)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3578899999999999988865
No 33
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=50.12 E-value=1.4e+02 Score=26.48 Aligned_cols=54 Identities=7% Similarity=0.065 Sum_probs=32.4
Q ss_pred CcchHhhHHHHHHHHHHHHhhhhcCcccccCChHHHHHHHHHHHHHHHHHHHHHHh
Q psy14114 1 MKQFVKDAGSALSRVVQLTEEKLGTSEKTELDAHFESLAGRSDVTKLWTEKIVGDT 56 (248)
Q Consensus 1 ~~~~~~~~~~~~~r~~Q~~~Ek~G~~ekTel~~e~~~lE~~~d~~k~~~~~l~k~~ 56 (248)
+++++++|.+.+.+|++..++--..... ...++..+.+.+..++-....+...+
T Consensus 6 v~~~~~~A~~tL~~AQ~lC~~A~~~l~~--t~~~L~~~~~~~~k~~Fl~~~l~~Q~ 59 (413)
T 4hpq_C 6 IEKLLENSRKFLTGAKLICQESNDHLTT--TKLRIREWQKFQSKLHFVLDCIQQQT 59 (413)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3689999999999999888765433222 23444445555555544444444433
No 34
>2z0v_A SH3-containing GRB2-like protein 3; helix bundle, alternative splicing, coiled coil, SH3 domain, endocytosis, structural genomics, NPPSFA; 2.49A {Homo sapiens}
Probab=46.10 E-value=1.1e+02 Score=24.43 Aligned_cols=67 Identities=13% Similarity=0.192 Sum_probs=47.8
Q ss_pred hhHHHHHHHHhcccCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhHhHHHHHHHHHHHHHHHHhhHhhhhhh
Q psy14114 87 LEYLGLDMTEAGNAFGPGTTYGTALIKVGQYEQKL-GAAEREFVNSAHVSFVQPLQKFLEGEMKTIVKERSLLESKRLD 164 (248)
Q Consensus 87 ~~~Lg~~m~~~~~~~~~~s~~g~aL~~~g~a~~~i-a~~~~~~~~~~~~~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd 164 (248)
...||.+|.. +|.++..+|.+...+ ..+...+..+++...-.-|..+.. ..+...+.|=.++..|--
T Consensus 91 ds~~g~aL~~----------~g~a~~~ia~~~~~~~~~v~~~~l~pL~~~l~~d~k~i~~-~rKkle~~rLd~D~ak~k 158 (240)
T 2z0v_A 91 DSTFGNALIE----------VGESMKLMAEVKDSLDINVKQTFIDPLQLLQDKDLKEIGH-HLKKLEGRRLDYDYKKKR 158 (240)
T ss_dssp TCHHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHHHHHHH-HHHHHHHHHHHHHHHHTT
T ss_pred CchHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHH
Confidence 4667777755 466888888888776 568889999997555467766665 777777766666666553
No 35
>2d1l_A Metastasis suppressor protein 1; IRSP53, actin binding, IMD, protein binding; HET: MSE; 1.85A {Mus musculus}
Probab=45.97 E-value=69 Score=26.36 Aligned_cols=23 Identities=9% Similarity=0.121 Sum_probs=12.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q psy14114 111 LIKVGQYEQKLGAAEREFVNSAH 133 (248)
Q Consensus 111 L~~~g~a~~~ia~~~~~~~~~~~ 133 (248)
-..+|.+..+|+..+...+...+
T Consensus 75 s~elG~~L~~i~~~hr~ie~~l~ 97 (253)
T 2d1l_A 75 TREIGSALTRMCMRHRSIEAKLR 97 (253)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 34555555555555555555444
No 36
>3te3_A Polycystic kidney disease 2-like 1 protein; trimeric coiled-coil, oligomerization domain, C-terminal CYT regulatory domain, metal transport; 2.69A {Homo sapiens}
Probab=43.04 E-value=46 Score=19.08 Aligned_cols=28 Identities=25% Similarity=0.182 Sum_probs=24.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14114 32 DAHFESLAGRSDVTKLWTEKIVGDTAAV 59 (248)
Q Consensus 32 ~~e~~~lE~~~d~~k~~~~~l~k~~~~y 59 (248)
.+||.-|-+||..++.....|...+...
T Consensus 6 ~eeF~~L~rRVlqlE~~l~gI~S~idav 33 (39)
T 3te3_A 6 GEEFYMLTRRVLQLETVLEGVVSQIDAV 33 (39)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999999999999887653
No 37
>4hpq_C ATG17, KLTH0D15642P; autophagy, protein transport; 3.06A {Lachancea thermotolerans cbs 6340}
Probab=41.50 E-value=1.9e+02 Score=25.60 Aligned_cols=37 Identities=5% Similarity=0.070 Sum_probs=24.8
Q ss_pred HhhHhHHHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHhh
Q psy14114 135 SFVQPLQKFLEGEMKTIVKERSLLESKRLDLDSCKNRVRKA 175 (248)
Q Consensus 135 ~~l~pL~~~l~~~~~~i~~~rkkl~~~RLd~Daak~k~~ka 175 (248)
.|-+|+ ..++.++...+.-.++-.-.||+....+.+-
T Consensus 312 ~fk~~~----~~~~~~~~~L~~~Y~~f~~aY~~lL~Ev~RR 348 (413)
T 4hpq_C 312 KFKASC----LEDIRQTRNLLDFYANFERSYHNLLKEVKRR 348 (413)
T ss_dssp HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 355555 3355566777777888888888888777543
No 38
>4gif_A Polycystic kidney disease 2-like 1 protein; coiled-coil, trimer, Trp channel, transient receptor potenti channel, polycystic kidney disease (PKD); 2.80A {Homo sapiens}
Probab=36.83 E-value=65 Score=19.09 Aligned_cols=28 Identities=25% Similarity=0.182 Sum_probs=24.9
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14114 32 DAHFESLAGRSDVTKLWTEKIVGDTAAV 59 (248)
Q Consensus 32 ~~e~~~lE~~~d~~k~~~~~l~k~~~~y 59 (248)
.+||.-|-+||..++.....|...+...
T Consensus 6 ~eeF~~L~rRVlqlE~~l~gI~S~idav 33 (45)
T 4gif_A 6 GEEFYMLTRRVLQLETVLEGVVSQIDAV 33 (45)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 6899999999999999999999887653
No 39
>1zww_A SH3-containing GRB2-like protein 2; coiled coil, transferase; 2.30A {Mus musculus} SCOP: a.238.1.1 PDB: 1x03_A 2d4c_A 1x04_A 2c08_A
Probab=31.40 E-value=2e+02 Score=23.09 Aligned_cols=159 Identities=15% Similarity=0.152 Sum_probs=69.8
Q ss_pred CcchHhhHHHHHHHHHHHHhhhhc-CcccccCChHHHHHHHHHHHHHHHHHHHHHH-------------hhh-h--cC--
Q psy14114 1 MKQFVKDAGSALSRVVQLTEEKLG-TSEKTELDAHFESLAGRSDVTKLWTEKIVGD-------------TAA-V--LT-- 61 (248)
Q Consensus 1 ~~~~~~~~~~~~~r~~Q~~~Ek~G-~~ekTel~~e~~~lE~~~d~~k~~~~~l~k~-------------~~~-y--l~-- 61 (248)
|||.+++++..+.--.=. .|++- ..+=.++...+..++.-+..+...+...+.. +.. + ..
T Consensus 6 ~kK~~~ra~q~~~ek~G~-~E~Tel~~d~~~lE~r~d~~k~~~~kl~k~~~~yl~~np~~r~~~~~~~~i~k~~g~~k~~ 84 (256)
T 1zww_A 6 LKKQFHKATQKVSEKVGG-AEGTKLDDDFKEMERKVDVTSRAVMEIMTKTIEYLQPNPASRAKLSMINTMSKIRGQEKGP 84 (256)
T ss_dssp ----------------------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSTTTC-------------------
T ss_pred HHHHHHHHHHHHHhHhcc-ccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCccccHHHHHHHHHHHhhcccccC
Confidence 578888877655321111 15553 2233357888999988888888777754421 110 0 00
Q ss_pred CCCCcchhHHHHHHhhhcCCCCCCchhHHHHHHHHhcccCCCCCcHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHhhHhH
Q psy14114 62 PNPGNRVEDFLFEKIEKKRPSRLSNLEYLGLDMTEAGNAFGPGTTYGTALIKVGQYEQKL-GAAEREFVNSAHVSFVQPL 140 (248)
Q Consensus 62 ~np~~r~~~~~~~k~~~~~~~~~~~~~~Lg~~m~~~~~~~~~~s~~g~aL~~~g~a~~~i-a~~~~~~~~~~~~~~l~pL 140 (248)
.-|.. ...+...+.... ....+...+|.++.. +|.+...+|.+.... ..+...+..++..-...-|
T Consensus 85 ~~p~~--~~~L~~~m~~~~-~~l~~~s~~g~aL~~----------~g~a~~~la~~~~~~~~~i~~~~l~pl~~~l~~~~ 151 (256)
T 1zww_A 85 GYPQA--EALLAEAMLKFG-RELGDDCNFGPALGE----------VGEAMRELSEVKDSLDMEVKQNFIDPLQNLHDKDL 151 (256)
T ss_dssp --CCH--HHHHHHHHHHHH-HHHCSSSSHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred CCCCc--HHHHHHHHHHHH-hhCCCCChHHHHHHH----------HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 01211 001111111000 000123456666644 566788888777665 5578888888875444455
Q ss_pred HHHHHHHHHHHHHHHhhHhhhhh--------hhHHHHHHHHh
Q psy14114 141 QKFLEGEMKTIVKERSLLESKRL--------DLDSCKNRVRK 174 (248)
Q Consensus 141 ~~~l~~~~~~i~~~rkkl~~~RL--------d~Daak~k~~k 174 (248)
..... ..+...+.|=.++..|- +++.|+.++..
T Consensus 152 k~i~k-~rkkl~~~rLdyD~~k~k~~k~~eeEle~A~~~fe~ 192 (256)
T 1zww_A 152 REIQH-HLKKLEGRRLDFGYKKKRQGKIPDEELRQALEKFDE 192 (256)
T ss_dssp HHHHH-HHHHHHHHHHHHHHHHHTTTTSCHHHHHHHHHHHHH
T ss_pred HHHHH-HHHHHHHHHHHHHHHHHHhccccHHHHHHHHHHHHH
Confidence 54444 55555555544444444 45555555543
No 40
>3aco_A Pacsin2, protein kinase C and casein kinase substrate in neurons protein 2; helix bundle, coiled-coil, endocytosis; 2.70A {Homo sapiens}
Probab=30.08 E-value=2.3e+02 Score=23.77 Aligned_cols=32 Identities=6% Similarity=0.083 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHhhHhhhhhhhHHHHHHHHhhc
Q psy14114 145 EGEMKTIVKERSLLESKRLDLDSCKNRVRKAR 176 (248)
Q Consensus 145 ~~~~~~i~~~rkkl~~~RLd~Daak~k~~kak 176 (248)
..-+..+.++|++.+...-+++.++.+..+++
T Consensus 153 ~~~~~~l~KaKk~Y~~~c~e~e~a~~~~~~~~ 184 (350)
T 3aco_A 153 AKKLKEVEAAKKAHHAACKEEKLAISREANSK 184 (350)
T ss_dssp HHHHHHHHHTTTTHHHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 34567899999999999999999998876554
No 41
>4aj5_1 SKA3, spindle and kinetochore-associated protein 3; cell cycle, SKA complex, mitosis, cell division, kinetochore microtubule attachment; 3.32A {Homo sapiens}
Probab=27.25 E-value=1.6e+02 Score=20.53 Aligned_cols=42 Identities=7% Similarity=0.024 Sum_probs=28.4
Q ss_pred HHhhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q psy14114 207 LEGVQTSHTSHLRCLHEFVEAQVNYYANCHKIMQDLKNELSK 248 (248)
Q Consensus 207 m~~i~~~e~e~~~~L~~lv~aQ~~y~~~~~~~L~~l~~~l~~ 248 (248)
....+++.-.--..+.+||+|-.--.++...=+..|...|+|
T Consensus 58 v~~~L~k~~~e~qe~~~FIKa~kvL~~rns~DI~~ire~fqK 99 (101)
T 4aj5_1 58 INILLDKARLENQEGIDFIKATKVLMEKNSMDIMKIREYFQK 99 (101)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhHHHHHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 333444333334467889999888888888877777777764
No 42
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=27.17 E-value=7.4e+02 Score=28.22 Aligned_cols=25 Identities=12% Similarity=0.158 Sum_probs=16.4
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHH
Q psy14114 106 TYGTALIKVGQYEQKLGAAEREFVN 130 (248)
Q Consensus 106 ~~g~aL~~~g~a~~~ia~~~~~~~~ 130 (248)
-|...|.++.++..+++..+.++..
T Consensus 1921 rl~~GL~KL~et~~~V~~l~~~L~~ 1945 (3245)
T 3vkg_A 1921 HLNIGLKKLRDTEAQVKDLQVSLAQ 1945 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3555677777777777776666544
No 43
>1s35_A Beta-I spectrin, spectrin beta chain, erythrocyte; two repeats of spectrin, alpha helical linker region, 3- helix coiled-coils, beta spectrin; 2.40A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=25.98 E-value=2.2e+02 Score=21.63 Aligned_cols=45 Identities=7% Similarity=-0.005 Sum_probs=28.6
Q ss_pred HHHHHHHHHHhhhhcCcccccCChHHHHHHHHHHHHHHHHHHHHH
Q psy14114 10 SALSRVVQLTEEKLGTSEKTELDAHFESLAGRSDVTKLWTEKIVG 54 (248)
Q Consensus 10 ~~~~r~~Q~~~Ek~G~~ekTel~~e~~~lE~~~d~~k~~~~~l~k 54 (248)
..+.-+..|+.++......++++.|....+..+..-+.....|..
T Consensus 7 ~~~~~l~~Wl~~~~~~l~~~~~~~dl~~v~~ll~~h~~~~~ei~~ 51 (214)
T 1s35_A 7 QDLDDFQAWLSITQKAVASEDMPESLPEAEQLLQQHAGIKDEIDG 51 (214)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 334445578887766555566788887777776665555554443
No 44
>3vkg_A Dynein heavy chain, cytoplasmic; AAA+ protein, molecular motor, microtubles, motor protein; HET: ADP SPM; 2.81A {Dictyostelium discoideum} PDB: 3vkh_A*
Probab=25.49 E-value=7.9e+02 Score=28.00 Aligned_cols=101 Identities=18% Similarity=0.261 Sum_probs=56.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH-HHhhHhH--HHHHHHHHHHHHHHHhhHhhhhhhhHHHHHHHHhhccccccccch
Q psy14114 109 TALIKVGQYEQKLGAAEREFVNSAH-VSFVQPL--QKFLEGEMKTIVKERSLLESKRLDLDSCKNRVRKARSLLGTQSNA 185 (248)
Q Consensus 109 ~aL~~~g~a~~~ia~~~~~~~~~~~-~~~l~pL--~~~l~~~~~~i~~~rkkl~~~RLd~Daak~k~~kak~~~~~~~~~ 185 (248)
.....|...|..+.+.-..|..... .+++.|= -.|++.+-.-+.+-|+.+...+--|..-..|+..+... .. .+
T Consensus 1863 ~~~~~~~~iH~sv~~~s~~~~~~~~R~~yvTP~syLeli~~y~~ll~~K~~el~~~~~rl~~GL~KL~et~~~-V~--~l 1939 (3245)
T 3vkg_A 1863 AVVSSLVYIHQTIGEANIRLLKRQGRQNYVTPRHYLDFINQVVLLINEKRDQLEEEQLHLNIGLKKLRDTEAQ-VK--DL 1939 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHSSSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HH--HH
Confidence 3344567777777666555554432 2334442 12334344445555555555555555555555544211 11 16
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhh
Q psy14114 186 ERDLRIAQSEFDRQAEITKLLLEGVQT 212 (248)
Q Consensus 186 e~el~~a~~~fe~~~e~~~~~m~~i~~ 212 (248)
..+|...+.+.++...++...|..+..
T Consensus 1940 ~~~L~~~~~~L~~k~~ea~~~l~~i~~ 1966 (3245)
T 3vkg_A 1940 QVSLAQKNRELDVKNEQANQKLKQMVQ 1966 (3245)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777777777888777777767766654
No 45
>2yy0_A C-MYC-binding protein; conserved hypothetical protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.40A {Homo sapiens}
Probab=24.56 E-value=41 Score=20.63 Aligned_cols=38 Identities=21% Similarity=0.171 Sum_probs=16.2
Q ss_pred HHhhhhcCcccccCChHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14114 18 LTEEKLGTSEKTELDAHFESLAGRSDVTKLWTEKIVGDTA 57 (248)
Q Consensus 18 ~~~Ek~G~~ekTel~~e~~~lE~~~d~~k~~~~~l~k~~~ 57 (248)
++...+|.+. .-+.|+..|-.+.+.++.-+..|.+...
T Consensus 6 fIk~~LG~~~--p~~~d~eaLk~E~~eLk~k~~~L~~~~~ 43 (53)
T 2yy0_A 6 FLKHHLGAAT--PENPEIELLRLELAEMKEKYEAIVEENK 43 (53)
T ss_dssp ------------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCCCC--CChhhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566777421 2355666666666666666665555443
No 46
>1m1j_A Fibrinogen alpha subunit; coiled coils, disulfide rings, fibrinogen, blood clotting; HET: NDG NAG; 2.70A {Gallus gallus} SCOP: h.1.8.1 PDB: 1ei3_A
Probab=23.47 E-value=4e+02 Score=23.86 Aligned_cols=77 Identities=9% Similarity=0.027 Sum_probs=50.6
Q ss_pred HHHHHHHHHhhHhhhhhhhHHHHHHHHhhccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhhhccchhHHHHHHHHH
Q psy14114 147 EMKTIVKERSLLESKRLDLDSCKNRVRKARSLLGTQSNAERDLRIAQSEFDRQAEITKLLLEGVQTSHTSHLRCLHEFVE 226 (248)
Q Consensus 147 ~~~~i~~~rkkl~~~RLd~Daak~k~~kak~~~~~~~~~e~el~~a~~~fe~~~e~~~~~m~~i~~~e~e~~~~L~~lv~ 226 (248)
++..+...-++...-+.|.|-.-..+... +|..+.-.+.+.+.+. .-...|.+++.+-..-+..|..=|.
T Consensus 87 y~~~~~~~lk~~~~q~~dndn~~~e~S~e---------Le~ri~yIK~kVd~qi-~~IrvLq~~l~~q~skIQRLE~dI~ 156 (491)
T 1m1j_A 87 VIVETINILKPGLEGAQQLDENYGHVSTE---------LRRRIVTLKQRVATQV-NRIKALQNSIQEQVVEMKRLEVDID 156 (491)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH---------HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhccchhHHHHHHHH---------HHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555556666555555321 5666666677777776 5555677777766667778999999
Q ss_pred HHHHHHH
Q psy14114 227 AQVNYYA 233 (248)
Q Consensus 227 aQ~~y~~ 233 (248)
+|++|++
T Consensus 157 ~q~~~Cr 163 (491)
T 1m1j_A 157 IKIRACK 163 (491)
T ss_dssp HHHHTTT
T ss_pred HHHHHhc
Confidence 9999875
No 47
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=22.61 E-value=63 Score=18.93 Aligned_cols=29 Identities=17% Similarity=0.258 Sum_probs=21.8
Q ss_pred ccCChHHHHHHHHHHHHHHHHHHHHHHhh
Q psy14114 29 TELDAHFESLAGRSDVTKLWTEKIVGDTA 57 (248)
Q Consensus 29 Tel~~e~~~lE~~~d~~k~~~~~l~k~~~ 57 (248)
+++.+--.+||+|++.+..-.+.|.....
T Consensus 12 sel~~r~e~LE~Ri~~LE~KLd~L~~~l~ 40 (43)
T 2pnv_A 12 SDLNERSEDFEKRIVTLETKLETLIGSIH 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhHHHHHHHHHHHHHHHHHHHHHH
Confidence 45666778888888888888777776554
No 48
>3hrn_A Transient receptor potential (Trp) channel subfamily P member 2 (TRPP2); coiled coil, helix bundle, trimer, calcium, disease mutation, glycoprotein; 1.90A {Homo sapiens} PDB: 3hro_A
Probab=22.58 E-value=1.4e+02 Score=18.97 Aligned_cols=27 Identities=26% Similarity=0.233 Sum_probs=24.5
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHhhh
Q psy14114 32 DAHFESLAGRSDVTKLWTEKIVGDTAA 58 (248)
Q Consensus 32 ~~e~~~lE~~~d~~k~~~~~l~k~~~~ 58 (248)
.+||.-|-++|..++.....|...+..
T Consensus 5 ~EEF~~L~rRVlqLE~sl~gI~SqIDa 31 (64)
T 3hrn_A 5 YEEFQVLVRRVDRMEHSIGSIVSKIDA 31 (64)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 589999999999999999999988865
No 49
>1i4d_A Arfaptin 2, partner of RAC1; coiled coil, G-protein, complex, signaling protein; HET: GDP; 2.50A {Homo sapiens} SCOP: a.238.1.2 PDB: 1i49_A* 1i4l_A* 1i4t_A*
Probab=21.86 E-value=3.1e+02 Score=21.96 Aligned_cols=20 Identities=0% Similarity=-0.014 Sum_probs=7.8
Q ss_pred HHHHHHHHHHHHHHHHHHHH
Q psy14114 222 HEFVEAQVNYYANCHKIMQD 241 (248)
Q Consensus 222 ~~lv~aQ~~y~~~~~~~L~~ 241 (248)
..+...-..||..-....++
T Consensus 175 kv~~~qL~~~~~al~~y~~~ 194 (224)
T 1i4d_A 175 KVMHKQLLLFHNAVSAYFAG 194 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 33333334444443333333
No 50
>3plt_A Sphingolipid long chain base-responsive protein L; eisosomes, LSP1, PIL1, BAR domain, plasma membrane, SELF-ASS phosphoprotein; 2.90A {Saccharomyces cerevisiae}
Probab=21.25 E-value=3.3e+02 Score=22.01 Aligned_cols=53 Identities=13% Similarity=0.177 Sum_probs=38.0
Q ss_pred hHHHHHHHHhcccCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHhHHHH
Q psy14114 88 EYLGLDMTEAGNAFGPGTTYGTALIKVGQYEQKLGAAEREFVNSAHVSFVQPLQKF 143 (248)
Q Consensus 88 ~~Lg~~m~~~~~~~~~~s~~g~aL~~~g~a~~~ia~~~~~~~~~~~~~~l~pL~~~ 143 (248)
...+..|..-|..- ++.++.++.++|.....+|++...|...+.. +-..|+.+
T Consensus 47 ~~~A~~Ls~WG~~e--dddl~DIsdklgvLl~e~ge~e~~~a~~~d~-yR~~LK~I 99 (234)
T 3plt_A 47 REAAKQLSLWGADN--DDDVSDVTDKLGVLIYELGELQDQFIDKYDQ-YRVTLKSI 99 (234)
T ss_dssp HHHHHHHHHHHHTS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
T ss_pred HHHHHHHHHHhcCC--CchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHH
Confidence 34455566666643 5689999999999999999999999887764 44444433
Done!