Query psy14115
Match_columns 319
No_of_seqs 356 out of 2037
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 19:55:18 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14115.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14115hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3bld_A Queuine tRNA-ribosyltra 100.0 3.1E-72 1.1E-76 549.2 22.0 214 1-214 166-384 (386)
2 2ash_A Queuine tRNA-ribosyltra 100.0 6.5E-72 2.2E-76 545.4 22.6 213 1-214 164-377 (381)
3 1iq8_A Archaeosine tRNA-guanin 100.0 3.5E-58 1.2E-62 470.7 17.7 204 1-226 140-347 (582)
4 3bld_A Queuine tRNA-ribosyltra 99.9 1.4E-26 4.9E-31 226.5 1.3 82 236-319 48-129 (386)
5 2ash_A Queuine tRNA-ribosyltra 99.9 3.1E-26 1.1E-30 223.5 1.9 81 236-319 47-127 (381)
6 1iq8_A Archaeosine tRNA-guanin 99.7 6.2E-19 2.1E-23 180.6 -3.5 77 237-315 42-118 (582)
7 2ftp_A Hydroxymethylglutaryl-C 94.9 0.19 6.5E-06 46.8 11.2 80 35-115 154-237 (302)
8 1ydo_A HMG-COA lyase; TIM-barr 93.5 0.38 1.3E-05 45.0 10.0 81 34-115 151-235 (307)
9 3ewb_X 2-isopropylmalate synth 93.3 0.54 1.9E-05 43.7 10.6 91 35-125 145-241 (293)
10 1nvm_A HOA, 4-hydroxy-2-oxoval 93.2 0.25 8.6E-06 46.9 8.4 91 35-126 144-239 (345)
11 3ble_A Citramalate synthase fr 93.1 0.7 2.4E-05 43.7 11.2 85 37-122 166-254 (337)
12 1ydn_A Hydroxymethylglutaryl-C 91.5 0.83 2.9E-05 42.0 9.4 77 36-113 151-231 (295)
13 1xky_A Dihydrodipicolinate syn 91.3 0.76 2.6E-05 42.8 8.9 82 34-116 27-117 (301)
14 3b4u_A Dihydrodipicolinate syn 91.3 0.92 3.1E-05 42.0 9.5 83 34-117 18-109 (294)
15 3s5o_A 4-hydroxy-2-oxoglutarat 91.1 0.77 2.6E-05 42.8 8.8 83 34-117 29-120 (307)
16 1rqb_A Transcarboxylase 5S sub 90.6 0.88 3E-05 46.1 9.2 89 37-125 172-264 (539)
17 2wkj_A N-acetylneuraminate lya 90.5 0.76 2.6E-05 42.8 8.2 82 34-116 26-116 (303)
18 3cpr_A Dihydrodipicolinate syn 90.5 0.89 3E-05 42.4 8.6 82 34-116 31-121 (304)
19 2nuw_A 2-keto-3-deoxygluconate 90.5 1.5 5E-05 40.5 10.0 79 34-117 14-102 (288)
20 3bg3_A Pyruvate carboxylase, m 90.2 2.4 8.2E-05 44.4 12.4 89 37-126 258-350 (718)
21 2cw6_A Hydroxymethylglutaryl-C 90.0 1.4 4.8E-05 40.7 9.5 79 35-114 151-233 (298)
22 3flu_A DHDPS, dihydrodipicolin 90.0 1 3.6E-05 41.7 8.6 81 34-116 22-112 (297)
23 2ehh_A DHDPS, dihydrodipicolin 90.0 0.82 2.8E-05 42.3 7.9 81 34-116 15-105 (294)
24 3a5f_A Dihydrodipicolinate syn 89.5 0.91 3.1E-05 41.9 7.8 81 34-116 17-106 (291)
25 2yxg_A DHDPS, dihydrodipicolin 89.5 0.83 2.8E-05 42.2 7.5 81 34-116 15-105 (289)
26 2r8w_A AGR_C_1641P; APC7498, d 89.2 0.88 3E-05 43.0 7.6 83 34-117 49-140 (332)
27 3rmj_A 2-isopropylmalate synth 89.1 2.2 7.4E-05 41.0 10.3 90 34-123 151-246 (370)
28 1f6k_A N-acetylneuraminate lya 89.0 0.92 3.1E-05 41.9 7.4 82 34-116 18-109 (293)
29 1w3i_A EDA, 2-keto-3-deoxy glu 88.8 1.7 5.6E-05 40.2 9.0 80 34-117 14-102 (293)
30 2r91_A 2-keto-3-deoxy-(6-phosp 88.6 1.6 5.4E-05 40.2 8.7 79 34-117 13-101 (286)
31 2rfg_A Dihydrodipicolinate syn 88.6 0.84 2.9E-05 42.4 6.9 83 34-117 15-106 (297)
32 2v9d_A YAGE; dihydrodipicolini 88.6 1.3 4.3E-05 42.2 8.2 82 34-116 46-136 (343)
33 2vc6_A MOSA, dihydrodipicolina 88.5 0.8 2.7E-05 42.3 6.6 82 34-116 15-105 (292)
34 2ojp_A DHDPS, dihydrodipicolin 88.3 0.94 3.2E-05 41.9 6.9 82 34-116 16-106 (292)
35 2nx9_A Oxaloacetate decarboxyl 88.1 2 6.9E-05 42.6 9.5 87 37-125 155-245 (464)
36 3m5v_A DHDPS, dihydrodipicolin 87.8 1.3 4.4E-05 41.1 7.6 82 34-117 22-114 (301)
37 3fkr_A L-2-keto-3-deoxyarabona 87.8 1.3 4.4E-05 41.4 7.6 82 34-117 23-114 (309)
38 3zwt_A Dihydroorotate dehydrog 87.7 2.3 7.9E-05 40.8 9.5 86 27-112 221-326 (367)
39 3tak_A DHDPS, dihydrodipicolin 87.6 1.9 6.4E-05 39.8 8.5 82 34-117 16-107 (291)
40 3eeg_A 2-isopropylmalate synth 87.5 2.1 7E-05 40.4 8.9 89 32-120 143-237 (325)
41 1o5k_A DHDPS, dihydrodipicolin 87.4 1.3 4.5E-05 41.2 7.4 82 34-116 27-117 (306)
42 2ekc_A AQ_1548, tryptophan syn 87.2 1.2 4.2E-05 40.4 7.0 82 27-109 17-125 (262)
43 1jub_A Dihydroorotate dehydrog 86.7 3.7 0.00013 37.6 10.0 85 28-112 160-270 (311)
44 3si9_A DHDPS, dihydrodipicolin 85.7 3.2 0.00011 38.9 9.1 81 34-116 37-127 (315)
45 3na8_A Putative dihydrodipicol 85.4 2.7 9.3E-05 39.3 8.5 83 34-118 39-131 (315)
46 3l21_A DHDPS, dihydrodipicolin 85.4 3.1 0.00011 38.7 8.8 81 34-116 30-120 (304)
47 1f76_A Dihydroorotate dehydrog 85.4 10 0.00035 35.1 12.4 85 28-112 213-317 (336)
48 3dz1_A Dihydrodipicolinate syn 85.2 2.6 9E-05 39.3 8.2 80 34-116 23-112 (313)
49 4dpp_A DHDPS 2, dihydrodipicol 85.0 3.5 0.00012 39.6 9.1 80 34-115 74-163 (360)
50 3qfe_A Putative dihydrodipicol 84.9 2 6.7E-05 40.3 7.2 83 34-117 26-117 (318)
51 3qze_A DHDPS, dihydrodipicolin 84.3 2.8 9.5E-05 39.2 7.9 82 34-117 38-129 (314)
52 3vkj_A Isopentenyl-diphosphate 82.9 6.6 0.00023 37.6 10.2 75 33-113 195-296 (368)
53 3e96_A Dihydrodipicolinate syn 81.5 2.8 9.4E-05 39.2 6.7 82 34-117 27-117 (316)
54 3d0c_A Dihydrodipicolinate syn 81.0 3.6 0.00012 38.4 7.3 83 34-117 27-117 (314)
55 3h5d_A DHDPS, dihydrodipicolin 79.7 7.4 0.00025 36.2 9.0 81 34-116 22-113 (311)
56 1vcf_A Isopentenyl-diphosphate 79.6 8.4 0.00029 35.8 9.4 80 33-117 189-289 (332)
57 1ep3_A Dihydroorotate dehydrog 79.0 5.7 0.00019 36.0 7.9 83 29-113 100-196 (311)
58 2ztj_A Homocitrate synthase; ( 78.7 5.9 0.0002 38.0 8.2 84 37-121 142-229 (382)
59 3oix_A Putative dihydroorotate 78.6 10 0.00034 36.1 9.7 85 28-112 195-303 (345)
60 2qf7_A Pyruvate carboxylase pr 78.4 5.6 0.00019 43.7 8.8 87 37-125 706-796 (1165)
61 3daq_A DHDPS, dihydrodipicolin 78.1 5.7 0.00019 36.5 7.6 79 36-116 19-107 (292)
62 2pcq_A Putative dihydrodipicol 77.7 4.7 0.00016 36.9 6.9 76 34-116 13-98 (283)
63 3eb2_A Putative dihydrodipicol 77.0 1.8 6.3E-05 40.1 3.9 81 34-116 19-109 (300)
64 1jub_A Dihydroorotate dehydrog 76.5 23 0.00079 32.2 11.3 83 28-113 95-192 (311)
65 1qop_A Tryptophan synthase alp 75.6 6 0.00021 35.8 6.9 82 27-109 17-125 (268)
66 2hmc_A AGR_L_411P, dihydrodipi 75.6 5.9 0.0002 37.6 7.1 80 34-117 41-129 (344)
67 1eep_A Inosine 5'-monophosphat 75.0 6.2 0.00021 37.8 7.2 66 44-112 156-221 (404)
68 3dxi_A Putative aldolase; TIM 74.1 9.6 0.00033 35.8 8.1 68 51-120 154-225 (320)
69 3hbl_A Pyruvate carboxylase; T 74.0 11 0.00036 41.5 9.5 86 37-124 689-778 (1150)
70 3ivs_A Homocitrate synthase, m 73.9 16 0.00055 35.8 9.9 85 37-121 177-263 (423)
71 3i65_A Dihydroorotate dehydrog 73.7 9.9 0.00034 37.2 8.3 84 29-112 272-373 (415)
72 1rd5_A Tryptophan synthase alp 73.4 14 0.00047 32.9 8.7 82 28-111 19-123 (262)
73 1vrd_A Inosine-5'-monophosphat 72.9 7.6 0.00026 38.1 7.4 66 44-112 240-305 (494)
74 2nli_A Lactate oxidase; flavoe 72.5 5.4 0.00018 38.1 6.0 67 45-114 242-314 (368)
75 1zfj_A Inosine monophosphate d 71.6 7 0.00024 38.2 6.8 66 45-113 237-302 (491)
76 1ep3_A Dihydroorotate dehydrog 69.5 8.9 0.0003 34.7 6.6 66 45-112 181-269 (311)
77 2nzl_A Hydroxyacid oxidase 1; 68.7 6.5 0.00022 37.9 5.7 68 44-114 264-337 (392)
78 1p0k_A Isopentenyl-diphosphate 68.0 32 0.0011 32.0 10.2 66 44-113 193-280 (349)
79 1nvm_A HOA, 4-hydroxy-2-oxoval 67.6 13 0.00043 35.0 7.4 79 37-116 27-116 (345)
80 1gox_A (S)-2-hydroxy-acid oxid 67.3 16 0.00054 34.7 8.1 70 44-113 237-309 (370)
81 2e6f_A Dihydroorotate dehydrog 66.9 23 0.0008 32.2 8.9 83 29-112 163-272 (314)
82 1tv5_A Dhodehase, dihydroorota 66.0 31 0.001 33.9 10.0 84 29-112 300-401 (443)
83 1ypf_A GMP reductase; GUAC, pu 65.8 15 0.00053 34.2 7.6 71 44-117 161-243 (336)
84 3sr7_A Isopentenyl-diphosphate 65.1 26 0.00088 33.5 9.1 69 44-114 221-308 (365)
85 2f6u_A GGGPS, (S)-3-O-geranylg 63.9 17 0.00058 32.7 7.2 57 43-109 23-80 (234)
86 1y0e_A Putative N-acetylmannos 63.7 16 0.00055 31.3 6.8 70 44-115 79-148 (223)
87 3o63_A Probable thiamine-phosp 63.4 20 0.00067 32.2 7.5 62 50-112 152-218 (243)
88 1gte_A Dihydropyrimidine dehyd 62.2 20 0.00068 38.5 8.5 85 27-113 635-735 (1025)
89 2gjl_A Hypothetical protein PA 62.2 19 0.00063 33.2 7.3 72 47-120 132-208 (328)
90 3r2g_A Inosine 5'-monophosphat 61.5 31 0.001 33.0 8.9 67 45-115 154-230 (361)
91 3vnd_A TSA, tryptophan synthas 60.8 13 0.00045 33.9 5.9 104 13-117 4-135 (267)
92 3sgz_A Hydroxyacid oxidase 2; 60.6 11 0.00038 35.9 5.6 67 44-113 229-301 (352)
93 1wa3_A 2-keto-3-deoxy-6-phosph 59.5 21 0.00071 30.2 6.7 82 27-116 10-91 (205)
94 2e6f_A Dihydroorotate dehydrog 59.0 31 0.0011 31.3 8.2 84 27-113 94-195 (314)
95 1yad_A Regulatory protein TENI 57.5 25 0.00084 30.2 6.9 67 46-115 123-194 (221)
96 1jcn_A Inosine monophosphate d 57.1 20 0.00067 35.4 6.9 68 43-113 257-324 (514)
97 2c6q_A GMP reductase 2; TIM ba 56.7 20 0.0007 33.8 6.7 79 30-113 109-189 (351)
98 3r2g_A Inosine 5'-monophosphat 56.5 19 0.00065 34.4 6.4 69 41-112 100-168 (361)
99 1eep_A Inosine 5'-monophosphat 55.6 35 0.0012 32.4 8.2 69 44-116 206-288 (404)
100 1ypf_A GMP reductase; GUAC, pu 54.7 54 0.0018 30.4 9.2 73 36-113 102-177 (336)
101 4ef8_A Dihydroorotate dehydrog 54.3 19 0.00065 34.3 6.0 84 28-112 195-305 (354)
102 1jcn_A Inosine monophosphate d 54.2 39 0.0013 33.2 8.5 69 45-116 309-390 (514)
103 3qja_A IGPS, indole-3-glycerol 54.0 17 0.00058 33.2 5.4 61 51-112 180-241 (272)
104 1mzh_A Deoxyribose-phosphate a 53.6 61 0.0021 28.3 8.9 76 34-113 126-204 (225)
105 2z6i_A Trans-2-enoyl-ACP reduc 52.6 20 0.00068 33.2 5.8 72 46-119 123-197 (332)
106 3khj_A Inosine-5-monophosphate 52.6 76 0.0026 30.0 9.9 66 43-112 107-172 (361)
107 1thf_D HISF protein; thermophI 52.6 29 0.001 30.2 6.6 63 44-112 155-223 (253)
108 1yxy_A Putative N-acetylmannos 51.4 34 0.0012 29.5 6.8 66 44-111 92-158 (234)
109 1viz_A PCRB protein homolog; s 51.2 31 0.0011 31.0 6.6 58 43-110 23-81 (240)
110 1vrd_A Inosine-5'-monophosphat 51.1 65 0.0022 31.3 9.5 67 46-115 292-371 (494)
111 3bo9_A Putative nitroalkan dio 51.0 19 0.00066 33.4 5.4 73 46-120 137-212 (326)
112 1ka9_F Imidazole glycerol phos 50.5 46 0.0016 28.9 7.6 67 44-112 35-103 (252)
113 4e38_A Keto-hydroxyglutarate-a 50.4 20 0.00069 32.2 5.2 62 43-117 96-157 (232)
114 3bw2_A 2-nitropropane dioxygen 49.7 29 0.00098 32.6 6.5 70 47-118 159-242 (369)
115 4avf_A Inosine-5'-monophosphat 49.7 48 0.0016 32.6 8.3 66 44-112 232-297 (490)
116 1kbi_A Cytochrome B2, L-LCR; f 49.6 21 0.00072 35.6 5.7 69 44-113 355-432 (511)
117 1ujp_A Tryptophan synthase alp 48.2 43 0.0015 30.4 7.2 87 27-116 16-130 (271)
118 2tps_A Protein (thiamin phosph 47.4 21 0.00073 30.5 4.8 64 49-114 132-201 (227)
119 3oix_A Putative dihydroorotate 47.4 1.5E+02 0.0051 27.8 11.0 83 28-113 130-227 (345)
120 3nav_A Tryptophan synthase alp 46.6 89 0.003 28.4 9.1 104 13-117 6-137 (271)
121 3usb_A Inosine-5'-monophosphat 46.6 51 0.0017 32.7 8.0 65 45-112 260-324 (511)
122 4avf_A Inosine-5'-monophosphat 46.3 50 0.0017 32.5 7.8 65 45-110 283-358 (490)
123 1f76_A Dihydroorotate dehydrog 46.2 1E+02 0.0034 28.2 9.5 74 39-113 152-245 (336)
124 3usb_A Inosine-5'-monophosphat 45.8 71 0.0024 31.6 8.9 65 44-112 309-387 (511)
125 4fxs_A Inosine-5'-monophosphat 45.7 37 0.0013 33.5 6.8 65 45-112 235-299 (496)
126 1eye_A DHPS 1, dihydropteroate 45.6 52 0.0018 30.2 7.4 75 38-116 27-110 (280)
127 3b0p_A TRNA-dihydrouridine syn 45.5 54 0.0018 30.7 7.6 83 29-113 59-164 (350)
128 3nav_A Tryptophan synthase alp 45.1 68 0.0023 29.2 8.0 71 38-112 161-236 (271)
129 1z41_A YQJM, probable NADH-dep 44.9 60 0.002 30.1 7.8 78 33-112 222-306 (338)
130 1me8_A Inosine-5'-monophosphat 44.2 57 0.002 32.1 7.9 72 43-115 295-383 (503)
131 3vnd_A TSA, tryptophan synthas 44.2 59 0.002 29.6 7.4 42 69-112 192-234 (267)
132 3tsm_A IGPS, indole-3-glycerol 44.1 29 0.001 31.8 5.3 58 51-112 187-248 (272)
133 1h5y_A HISF; histidine biosynt 43.9 66 0.0023 27.3 7.5 69 44-114 37-107 (253)
134 1p4c_A L(+)-mandelate dehydrog 43.6 70 0.0024 30.3 8.2 64 45-113 238-307 (380)
135 4ef8_A Dihydroorotate dehydrog 43.3 1E+02 0.0036 29.0 9.3 83 28-113 128-228 (354)
136 1ka9_F Imidazole glycerol phos 43.3 1E+02 0.0034 26.6 8.6 61 46-112 158-224 (252)
137 2vp8_A Dihydropteroate synthas 43.2 60 0.002 30.5 7.4 87 27-115 42-146 (318)
138 3tdn_A FLR symmetric alpha-bet 42.8 52 0.0018 28.7 6.6 67 43-111 38-106 (247)
139 1aj0_A DHPS, dihydropteroate s 41.5 60 0.0021 29.8 7.1 78 35-115 31-119 (282)
140 1geq_A Tryptophan synthase alp 41.4 52 0.0018 28.5 6.4 82 28-112 6-114 (248)
141 1h5y_A HISF; histidine biosynt 40.9 82 0.0028 26.7 7.6 62 45-112 159-226 (253)
142 4fo4_A Inosine 5'-monophosphat 39.6 50 0.0017 31.4 6.4 65 45-112 112-176 (366)
143 4fxs_A Inosine-5'-monophosphat 39.1 80 0.0027 31.1 8.0 64 44-110 284-360 (496)
144 2c6q_A GMP reductase 2; TIM ba 39.0 1E+02 0.0035 28.9 8.4 69 44-116 173-255 (351)
145 1rd5_A Tryptophan synthase alp 38.9 69 0.0024 28.2 6.9 41 70-112 188-229 (262)
146 1xi3_A Thiamine phosphate pyro 38.8 46 0.0016 27.9 5.5 63 49-114 124-191 (215)
147 3q58_A N-acetylmannosamine-6-p 38.4 59 0.002 28.7 6.3 62 45-111 93-154 (229)
148 2y5s_A DHPS, dihydropteroate s 37.5 75 0.0026 29.4 7.1 88 27-115 23-126 (294)
149 2hl7_A Cytochrome C-type bioge 37.1 20 0.00068 27.4 2.5 47 150-213 28-74 (84)
150 1zfj_A Inosine monophosphate d 37.0 1E+02 0.0035 29.8 8.3 69 44-116 286-368 (491)
151 1y0e_A Putative N-acetylmannos 37.0 1.1E+02 0.0038 25.8 7.8 64 47-112 133-203 (223)
152 2w6r_A Imidazole glycerol phos 36.9 1.4E+02 0.0049 25.8 8.7 61 46-112 162-228 (266)
153 1thf_D HISF protein; thermophI 36.3 1.2E+02 0.0041 26.1 8.0 64 45-110 35-100 (253)
154 3w01_A Heptaprenylglyceryl pho 35.9 70 0.0024 28.7 6.4 59 42-109 25-83 (235)
155 3vzx_A Heptaprenylglyceryl pho 35.8 64 0.0022 28.8 6.1 57 44-109 22-78 (228)
156 3ffs_A Inosine-5-monophosphate 35.6 58 0.002 31.5 6.2 65 45-110 197-272 (400)
157 2yxb_A Coenzyme B12-dependent 35.1 1.2E+02 0.004 25.0 7.4 58 52-110 68-126 (161)
158 2kw0_A CCMH protein; oxidoredu 35.0 22 0.00074 27.6 2.5 50 147-213 22-71 (90)
159 3igs_A N-acetylmannosamine-6-p 34.8 74 0.0025 28.0 6.3 63 45-112 93-155 (232)
160 3hq1_A 2-isopropylmalate synth 34.4 2.4E+02 0.0083 29.0 10.9 88 37-124 223-322 (644)
161 3gr7_A NADPH dehydrogenase; fl 34.4 1.1E+02 0.0037 28.5 7.8 76 34-111 223-305 (340)
162 3vkj_A Isopentenyl-diphosphate 34.2 1.3E+02 0.0044 28.5 8.4 73 36-113 134-218 (368)
163 3t7v_A Methylornithine synthas 34.2 55 0.0019 30.0 5.6 83 36-118 213-305 (350)
164 2ekc_A AQ_1548, tryptophan syn 34.1 2E+02 0.0068 25.5 9.2 40 70-112 193-233 (262)
165 1gte_A Dihydropyrimidine dehyd 33.4 46 0.0016 35.7 5.5 41 72-113 775-816 (1025)
166 3sr7_A Isopentenyl-diphosphate 33.3 73 0.0025 30.3 6.4 83 26-113 144-237 (365)
167 1vhc_A Putative KHG/KDPG aldol 33.2 80 0.0027 27.7 6.3 54 49-115 85-138 (224)
168 3ffs_A Inosine-5-monophosphate 33.2 1.1E+02 0.0039 29.4 7.9 66 43-112 146-211 (400)
169 3m47_A Orotidine 5'-phosphate 32.9 34 0.0012 30.2 3.8 62 44-114 141-203 (228)
170 1vhn_A Putative flavin oxidore 32.8 18 0.00062 33.3 2.0 73 36-112 136-212 (318)
171 2vef_A Dihydropteroate synthas 32.8 80 0.0027 29.4 6.5 86 27-115 10-114 (314)
172 3lab_A Putative KDPG (2-keto-3 32.7 20 0.00069 31.9 2.2 48 88-136 114-173 (217)
173 3hgj_A Chromate reductase; TIM 32.5 1.2E+02 0.004 28.3 7.7 78 33-112 232-317 (349)
174 2qr6_A IMP dehydrogenase/GMP r 32.4 1.1E+02 0.0039 28.6 7.7 72 45-116 224-309 (393)
175 3jr2_A Hexulose-6-phosphate sy 31.8 53 0.0018 28.2 4.8 63 45-112 75-138 (218)
176 3tjx_A Dihydroorotate dehydrog 31.2 97 0.0033 28.7 6.8 52 60-112 253-305 (354)
177 4a29_A Engineered retro-aldol 31.1 59 0.002 29.7 5.1 36 76-111 195-231 (258)
178 1tx2_A DHPS, dihydropteroate s 31.0 1.3E+02 0.0046 27.7 7.6 86 27-115 40-144 (297)
179 1qop_A Tryptophan synthase alp 30.3 88 0.003 27.9 6.2 39 72-112 194-233 (268)
180 1p0k_A Isopentenyl-diphosphate 30.1 99 0.0034 28.5 6.7 82 27-113 117-209 (349)
181 3igs_A N-acetylmannosamine-6-p 30.1 1.2E+02 0.004 26.7 6.9 61 47-110 143-207 (232)
182 3b0p_A TRNA-dihydrouridine syn 30.0 78 0.0027 29.5 6.0 68 43-112 147-224 (350)
183 2otd_A Glycerophosphodiester p 29.8 51 0.0017 28.8 4.4 36 85-120 207-242 (247)
184 3qvq_A Phosphodiesterase OLEI0 29.5 37 0.0012 30.0 3.4 35 85-119 210-244 (252)
185 3khj_A Inosine-5-monophosphate 29.2 1.4E+02 0.0049 28.1 7.7 67 45-111 158-234 (361)
186 1yxy_A Putative N-acetylmannos 29.0 64 0.0022 27.7 4.9 64 46-112 146-214 (234)
187 1ydn_A Hydroxymethylglutaryl-C 28.9 1.6E+02 0.0056 26.3 7.8 72 37-112 23-98 (295)
188 4fo4_A Inosine 5'-monophosphat 28.7 1.9E+02 0.0063 27.4 8.4 66 46-112 163-239 (366)
189 1vd6_A Glycerophosphoryl diest 28.7 42 0.0014 29.0 3.6 37 84-120 185-221 (224)
190 4af0_A Inosine-5'-monophosphat 28.6 1E+02 0.0035 31.3 6.7 78 28-110 270-347 (556)
191 1vzw_A Phosphoribosyl isomeras 28.4 69 0.0024 27.6 5.0 63 44-112 150-221 (244)
192 1xm3_A Thiazole biosynthesis p 27.8 68 0.0023 28.7 4.9 31 85-115 178-209 (264)
193 3ta6_A Triosephosphate isomera 27.4 42 0.0014 30.8 3.4 31 48-80 227-257 (267)
194 3l0g_A Nicotinate-nucleotide p 26.8 1.5E+02 0.005 27.7 7.1 64 49-120 223-286 (300)
195 1zlp_A PSR132, petal death pro 26.3 1.1E+02 0.0037 28.7 6.2 81 45-126 51-153 (318)
196 3gnn_A Nicotinate-nucleotide p 26.2 1.4E+02 0.0049 27.7 6.9 66 47-120 223-288 (298)
197 3ks6_A Glycerophosphoryl diest 26.1 40 0.0014 29.7 3.0 35 85-119 204-238 (250)
198 3hgj_A Chromate reductase; TIM 25.9 1.5E+02 0.0052 27.5 7.2 71 44-114 156-260 (349)
199 1qpo_A Quinolinate acid phosph 25.7 1.6E+02 0.0056 26.9 7.2 71 45-120 206-276 (284)
200 3lab_A Putative KDPG (2-keto-3 25.3 1E+02 0.0035 27.3 5.5 77 27-113 13-92 (217)
201 1ea0_A Glutamate synthase [NAD 25.3 1.8E+02 0.0063 32.9 8.6 68 46-113 1010-1093(1479)
202 3mcm_A 2-amino-4-hydroxy-6-hyd 25.1 1.5E+02 0.005 29.1 7.1 89 26-115 190-301 (442)
203 2ztj_A Homocitrate synthase; ( 25.0 1.2E+02 0.004 28.8 6.3 73 36-113 21-94 (382)
204 4dbe_A Orotidine 5'-phosphate 24.9 52 0.0018 29.0 3.5 68 43-119 125-193 (222)
205 3iix_A Biotin synthetase, puta 24.7 2E+02 0.0068 25.9 7.6 71 38-111 85-157 (348)
206 3tqv_A Nicotinate-nucleotide p 24.5 1.3E+02 0.0045 27.8 6.3 65 48-120 213-277 (287)
207 3kxq_A Triosephosphate isomera 24.3 48 0.0017 30.6 3.3 28 49-78 245-272 (275)
208 2btm_A TIM, protein (triosepho 24.2 31 0.001 31.5 1.9 42 31-77 206-248 (252)
209 3ve9_A Orotidine-5'-phosphate 23.9 54 0.0018 28.8 3.4 70 40-119 115-186 (215)
210 3no3_A Glycerophosphodiester p 23.9 47 0.0016 29.1 3.0 35 85-119 196-230 (238)
211 3cwo_X Beta/alpha-barrel prote 23.7 1.3E+02 0.0045 24.7 5.7 64 45-110 135-200 (237)
212 1vcf_A Isopentenyl-diphosphate 23.6 79 0.0027 29.1 4.6 40 71-113 170-212 (332)
213 4g1k_A Triosephosphate isomera 23.6 45 0.0015 30.7 2.9 27 49-77 244-270 (272)
214 2y88_A Phosphoribosyl isomeras 23.5 1.1E+02 0.0037 26.2 5.3 63 44-112 153-224 (244)
215 2w6r_A Imidazole glycerol phos 23.5 1.1E+02 0.0039 26.5 5.5 65 44-110 34-100 (266)
216 3ch0_A Glycerophosphodiester p 23.3 63 0.0021 28.5 3.8 35 85-119 236-270 (272)
217 3q94_A Fructose-bisphosphate a 23.0 68 0.0023 29.7 4.0 97 4-108 117-231 (288)
218 1yya_A Triosephosphate isomera 23.0 39 0.0013 30.7 2.3 41 31-77 206-248 (250)
219 1wv2_A Thiazole moeity, thiazo 23.0 3E+02 0.01 25.1 8.3 28 85-112 187-215 (265)
220 3l12_A Putative glycerophospho 22.8 53 0.0018 29.9 3.2 35 85-119 268-302 (313)
221 1m6j_A TIM, TPI, triosephospha 22.8 54 0.0019 29.9 3.3 33 46-80 227-259 (261)
222 3q58_A N-acetylmannosamine-6-p 22.2 1.1E+02 0.0038 26.8 5.2 61 47-110 143-207 (229)
223 2bdq_A Copper homeostasis prot 22.2 2.1E+02 0.0073 25.4 7.0 67 42-113 135-207 (224)
224 3sgz_A Hydroxyacid oxidase 2; 22.0 64 0.0022 30.7 3.7 43 70-114 204-246 (352)
225 3m9y_A Triosephosphate isomera 21.9 65 0.0022 29.3 3.6 29 47-77 224-252 (254)
226 3s6d_A Putative triosephosphat 21.9 57 0.002 30.6 3.3 29 52-82 281-309 (310)
227 4hb7_A Dihydropteroate synthas 21.9 2.3E+02 0.0079 25.9 7.3 87 27-114 7-109 (270)
228 1kbi_A Cytochrome B2, L-LCR; f 21.7 61 0.0021 32.2 3.6 40 72-113 332-371 (511)
229 3iwp_A Copper homeostasis prot 21.7 2.8E+02 0.0095 25.6 7.9 68 42-114 168-239 (287)
230 3pm6_A Putative fructose-bisph 21.4 69 0.0024 30.0 3.7 63 45-108 177-246 (306)
231 2v82_A 2-dehydro-3-deoxy-6-pho 21.2 3.1E+02 0.01 22.8 7.7 78 26-111 6-85 (212)
232 3ceu_A Thiamine phosphate pyro 21.1 1.9E+02 0.0066 24.4 6.4 64 52-115 106-174 (210)
233 2gou_A Oxidoreductase, FMN-bin 21.1 1.5E+02 0.005 27.9 6.0 73 35-111 245-320 (365)
234 3vk5_A MOEO5; TIM barrel, tran 21.0 98 0.0033 28.7 4.6 40 73-112 215-255 (286)
235 2nli_A Lactate oxidase; flavoe 21.0 66 0.0023 30.4 3.6 41 71-113 217-257 (368)
236 1tre_A Triosephosphate isomera 20.6 60 0.0021 29.5 3.1 42 32-78 207-249 (255)
237 3f4w_A Putative hexulose 6 pho 20.5 1.5E+02 0.005 24.8 5.4 60 45-110 69-131 (211)
238 2v82_A 2-dehydro-3-deoxy-6-pho 20.4 90 0.0031 26.3 4.0 57 50-112 118-175 (212)
239 3bo9_A Putative nitroalkan dio 20.2 2.6E+02 0.0089 25.5 7.5 74 31-113 28-109 (326)
240 3tr9_A Dihydropteroate synthas 20.2 2.2E+02 0.0074 26.6 6.9 76 38-116 47-135 (314)
No 1
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=100.00 E-value=3.1e-72 Score=549.24 Aligned_cols=214 Identities=36% Similarity=0.741 Sum_probs=197.5
Q ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCC----CceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHH
Q psy14115 1 PRVAIAKDRTVRWLDRCLAAHRNPTT----QNIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVL 76 (319)
Q Consensus 1 ~r~~~av~RT~rWl~r~~~~~~~~~~----q~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~ 76 (319)
+|+++||+||+||++||++++++.+. |++|||||||.++|||++|++++.+++++||||||+++||++++++++|+
T Consensus 166 ~~~~~sv~rT~rW~~r~~~~~~~~~~~~~~~~lfgiVQGg~~~dLR~~sa~~l~~~~~~GyaIGGlsvge~~~~~~~~l~ 245 (386)
T 3bld_A 166 SRAASSMERSMRWAKRSRDAFDSRKEQAENAALFGIQQGSVFENLRQQSADALAEIGFDGYAVGGLAGGEGQDEMFRVLD 245 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSHHHHHHCEEEEEECCTTCHHHHHHHHHHHHHHCCSEEEECSCSSSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCcccccccEEEEEcCCCCHHHHHHHHHHHHhcCCCCeeEcCcccCCCHHHHHHHHH
Confidence 37999999999999999999876544 89999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCccccCcCCcceeccceEEcCCcccccCCCCCCCCCCCcccCc
Q psy14115 77 VSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTARFGSALVRQGQLQLKRDEYATDFTPIDNQCPCSTCAR 156 (319)
Q Consensus 77 ~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar~G~alt~~G~i~L~~~~~~~D~~Pi~~~C~C~tC~~ 156 (319)
.+.+.||++||||+||+|+|++|+.+|++|||||||++|+|.||+|.|||++|.+||++.+|++||+||+++|+||+|++
T Consensus 246 ~~~~~LP~~kPRylmGvg~P~~il~~V~~GvDmFDcv~ptr~Ar~G~alt~~g~i~l~~~~y~~D~~Pld~~C~C~tC~~ 325 (386)
T 3bld_A 246 FSVPMLPDDKPHYLMGVGKPDDIVGAVERGIDMFDCVLPTRSGRNGQAFTWDGPINIRNARFSEDLKPLDSECHCAVCQK 325 (386)
T ss_dssp HHGGGSCTTSCEEETTCCCHHHHHHHHTTTCCEEC----------CEECCTTCCEETTSGGGTTCCSCSSSSCCSHHHHH
T ss_pred HHHhhCCCCCcEEEeCCCCHHHHHHHHHcCCCEEeCcHHHHHHhCCEEEcCCccEECcchhhccCCCCCCCCCCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHhhhh-cCChhHhhHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHhCCC
Q psy14115 157 YTRAYLHHIA-TVEPSACHLLSVHNIAFQMRLMREIRESIKEQRFPQYVKQYMKDAYPD 214 (319)
Q Consensus 157 ~tRAYLhHLl-~~E~la~~LLtiHNl~~~~~l~~~iR~aI~~g~f~~~v~~f~~~~~~~ 214 (319)
|||||||||+ ++||||++||++||+++|.+||++||+||++|+|++|+++|.++|+++
T Consensus 326 ysRAYLhHL~~~~E~l~~~LltiHNl~~~~~l~~~iR~aI~~g~f~e~~~~f~~~~~~~ 384 (386)
T 3bld_A 326 WSRAYIHHLIRAGEILGAMLMTEHNIAFYQQLMQKIRDSISEGRFSQFAQDFRARYFAR 384 (386)
T ss_dssp CCHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHC--
T ss_pred cCHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhcCC
Confidence 9999999999 999999999999999999999999999999999999999999999874
No 2
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=100.00 E-value=6.5e-72 Score=545.36 Aligned_cols=213 Identities=39% Similarity=0.640 Sum_probs=207.1
Q ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCCCceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhc
Q psy14115 1 PRVAIAKDRTVRWLDRCLAAHRNPTTQNIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSIN 80 (319)
Q Consensus 1 ~r~~~av~RT~rWl~r~~~~~~~~~~q~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~ 80 (319)
+|+++||+||+||++||++++++. .|++|||||||.++|||++|++++.+++++||||||+++||++++++++|+.+.+
T Consensus 164 ~~~~~sv~rT~rWa~r~~~~~~~~-~~~lfgiVQGg~~~dLR~~sa~~l~~~~~~GyaIGGlsvGe~~~~~~~~l~~~~~ 242 (381)
T 2ash_A 164 EEVKEATERTYRWALRSKKAFKTE-NQALFGIVQGGIYPDLRRESALQLTSIGFDGYAIGGLSIGEERSLTLEMTEVTVE 242 (381)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCCCS-SCEEEEEECCTTCHHHHHHHHHHHHTTCCSEEEECSCSSSSCHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCC-CCcEEEEEcCCCCHHHHHHHHHHHHhcCCceEEecCcccCCCHHHHHHHHHHHHh
Confidence 379999999999999999998765 5899999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCccccCcCCcceeccceEEcCCcccccCCCCCCCCCCCcccCcCCHH
Q psy14115 81 CLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTARFGSALVRQGQLQLKRDEYATDFTPIDNQCPCSTCARYTRA 160 (319)
Q Consensus 81 ~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar~G~alt~~G~i~L~~~~~~~D~~Pi~~~C~C~tC~~~tRA 160 (319)
.||++||||+||+|+|.+|+.+|++|||||||++|+|.||+|.|||++|.+||++.+|++|++||+++|+||+|++||||
T Consensus 243 ~LP~~kPRyLmGvG~P~~il~~V~~GvDmFDcv~Ptr~Ar~G~~lt~~G~i~l~~~~y~~D~~Pld~~C~C~tC~~ysRA 322 (381)
T 2ash_A 243 FLPEDKPRYFMGGGSPELILELVDRGVDMFDSVFPTRIARHGTALTWNGKLNLKASYNKRSLEPVDERCGCYTCKNFTRS 322 (381)
T ss_dssp TSCTTSCEEECSCCCHHHHHHHHTTTCCEEEESHHHHHHHTTEEEETTEEEETTSGGGTTCCSCSCTTCCSHHHHHCCHH
T ss_pred hCCCCCcEEEcCCCCHHHHHHHHHcCCCEEeCChhhhhhcCceEeccCCceEecchhhccCCCCCCCCCCCccCcccCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhh-cCChhHhhHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHhCCC
Q psy14115 161 YLHHIA-TVEPSACHLLSVHNIAFQMRLMREIRESIKEQRFPQYVKQYMKDAYPD 214 (319)
Q Consensus 161 YLhHLl-~~E~la~~LLtiHNl~~~~~l~~~iR~aI~~g~f~~~v~~f~~~~~~~ 214 (319)
|||||+ ++||||++||++||+++|.+||++||+||++|+|++|+++|.++|+++
T Consensus 323 YLhHL~~~~E~l~~~LltiHNl~~~~~l~~~iR~aI~~g~f~e~~~~f~~~~~~~ 377 (381)
T 2ash_A 323 YIHHLFDRGEVLGQILLTIHNINFMISLMKEVRRSIESGTFKELKSKVVEVYSSG 377 (381)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHTC--
T ss_pred HHHhhhccchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhccC
Confidence 999999 999999999999999999999999999999999999999999999863
No 3
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=100.00 E-value=3.5e-58 Score=470.67 Aligned_cols=204 Identities=20% Similarity=0.303 Sum_probs=189.9
Q ss_pred CHHHHHHHHHHHHHHHHHHhhcCCCCCceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC---CHHHHHHHHHH
Q psy14115 1 PRVAIAKDRTVRWLDRCLAAHRNPTTQNIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE---AKEDFWYSVLV 77 (319)
Q Consensus 1 ~r~~~av~RT~rWl~r~~~~~~~~~~q~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge---~~~e~~~ii~~ 77 (319)
+|+++||+||+||++||++. . + |++|||||||.++|||++|++++.+++++||||||+..++ +.+++.++|..
T Consensus 140 ~~~~~s~~rT~rw~~r~~~~-~--~-~~lfgiVQGg~~~dLR~~sa~~l~~~~~~G~aIGg~~~~~e~~~~~~~~~~l~~ 215 (582)
T 1iq8_A 140 EQAVKELEITLSRAREAEEI-K--E-IPMNATIQGSTYTDLRRYAARRLSSMNFEIHPIGGVVPLLESYRFRDVVDIVIS 215 (582)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-C--C-SCBBCCBCCTTCHHHHHHHHHHHHHSCCSBEEECSCHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhc-C--C-CeEEEEEeCCCCHHHHHHHHHHHHhCCCCeEEecCccchhhhccHHHHHHHHHH
Confidence 37899999999999999987 2 2 8999999999999999999999999999999999985443 24567999999
Q ss_pred hhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCccccCcCCcceeccceEEcCCcccccCCCCCCCCCCCcccCcC
Q psy14115 78 SINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTARFGSALVRQGQLQLKRDEYATDFTPIDNQCPCSTCARY 157 (319)
Q Consensus 78 ~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar~G~alt~~G~i~L~~~~~~~D~~Pi~~~C~C~tC~~~ 157 (319)
+.+.||++||||+||+|+|.+|+.+|++|||||||++|++.||+|.|||++|.+||++.+| ++|+||||++|
T Consensus 216 ~~~~LP~~kPr~lmGvg~P~~i~~~v~~GvD~FDcv~ptr~Ar~G~~~t~~g~~~l~~~~~--------~~C~C~tC~~~ 287 (582)
T 1iq8_A 216 SKMALRPDRPVHLFGAGHPIVFALAVAMGVDLFDSASYALYAKDDRYMTPEGTKRLDELDY--------FPCSCPVCSKY 287 (582)
T ss_dssp HHHHSCTTSCEEETTCCCGGGHHHHHHTTCCEEEESHHHHHHHTTEEEETTEEEEGGGCSS--------CCCCSTTTTTC
T ss_pred HHhhCCCCCcEEecCCCCHHHHHHHHHcCCcEEecchhhhhhcCCEEEecCCceecccccc--------CCCCCcccCcc
Confidence 9999999999999999999999999999999999999999999999999999999999987 39999999999
Q ss_pred CHHHHhhhh-cCChhHhhHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHhCCCCCCChhHhhhhh
Q psy14115 158 TRAYLHHIA-TVEPSACHLLSVHNIAFQMRLMREIRESIKEQRFPQYVKQYMKDAYPDENYPRWTIDALR 226 (319)
Q Consensus 158 tRAYLhHLl-~~E~la~~LLtiHNl~~~~~l~~~iR~aI~~g~f~~~v~~f~~~~~~~~~~p~~~~~~~r 226 (319)
||||||||+ ++| ++||++||+++|.+||++||+||++|+|++|+++|++ ..||+.+++|
T Consensus 288 sraYl~HL~~~~~---~~Ll~iHNl~~~~~l~~~iR~aI~~g~~~~~~~~~~r-------~hp~l~~~~r 347 (582)
T 1iq8_A 288 TPQELREMPKEER---TRLLALHNLWVIKEEIKRVKQAIKEGELWRLVDERAR-------SHPKLYSAYK 347 (582)
T ss_dssp CHHHHTTSCHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHTCHHHHHHHHHT-------TCHHHHHHHH
T ss_pred CHHHHHHhhhhhh---HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHH-------hCHHHHHHHH
Confidence 999999999 765 7999999999999999999999999999999999987 4677888887
No 4
>3bld_A Queuine tRNA-ribosyltransferase; TGT, PREQ1, glycosyltransferase, metal-binding, queuosine biosynthesis, tRNA processing; HET: PRF; 1.19A {Zymomonas mobilis} PDB: 3bl3_A* 1ozq_A* 1ozm_A* 1r5y_A* 1enu_A* 1f3e_A* 1k4h_A* 1n2v_A* 1p0b_A* 1p0d_A 1p0e_A* 1pud_A 1q2r_A* 1q2s_A* 1q4w_A* 1q63_A* 1q65_A* 1q66_A* 1k4g_A* 1s38_A* ...
Probab=99.92 E-value=1.4e-26 Score=226.50 Aligned_cols=82 Identities=35% Similarity=0.596 Sum_probs=70.2
Q ss_pred ccccccccchhhhhcccceeeehhhHHHhhcCccHHHHHHhCCcccccCCCCccccCCCCceeEecccccccccCceeee
Q psy14115 236 EPCRSGLRRSLKCLQISTYLVRSETACAVGYVIGVDVLKKAGGLHKFMGWKRALLTDSGGFQMVSLLKFAEITEEGVKFQ 315 (319)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~g~~~~~~~gglh~f~~w~~~ilTDSGgfQ~~sl~~~~~~~e~gv~f~ 315 (319)
.++.|+|--+ ++.+++.-||++||| ||+++||.|+|+++||||+||+|++||||||||||||||++++|++|+||.|+
T Consensus 48 ~gtvk~lt~~-~l~~~g~~iil~Nty-hl~lrPg~~~i~~~gGLh~Fm~w~~~ilTDSGgfQv~sl~~~~~i~e~Gv~F~ 125 (386)
T 3bld_A 48 AATVKALKPE-TVRATGADIILGNTY-HLMLRPGAERIAKLGGLHSFMGWDRPILTDSGGFQVMSLSSLTKQSEEGVTFK 125 (386)
T ss_dssp SSSBTTCCHH-HHHHTTCSCEEECHH-HHHHTTCHHHHHHTTCHHHHHTCCSCEEECCSHHHHHC------CBTTBCCCC
T ss_pred CCcCCcCCHH-HHHHcCCCEEecchH-HHhhcCcHHHHHHhCChHhhccCCCCceeecCceEEEeccccccCCCCceeee
Confidence 5688998888 888999999999999 99999999999999999999999999999999999999999999999999999
Q ss_pred CCCC
Q psy14115 316 SPNN 319 (319)
Q Consensus 316 s~~~ 319 (319)
||+|
T Consensus 126 s~~d 129 (386)
T 3bld_A 126 SHLD 129 (386)
T ss_dssp C---
T ss_pred cCCC
Confidence 9986
No 5
>2ash_A Queuine tRNA-ribosyltransferase; TM1561, tRNA-guanine, struc genomics, joint center for structural genomics, JCSG; 1.90A {Thermotoga maritima}
Probab=99.91 E-value=3.1e-26 Score=223.54 Aligned_cols=81 Identities=41% Similarity=0.632 Sum_probs=77.4
Q ss_pred ccccccccchhhhhcccceeeehhhHHHhhcCccHHHHHHhCCcccccCCCCccccCCCCceeEecccccccccCceeee
Q psy14115 236 EPCRSGLRRSLKCLQISTYLVRSETACAVGYVIGVDVLKKAGGLHKFMGWKRALLTDSGGFQMVSLLKFAEITEEGVKFQ 315 (319)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~g~~~~~~~gglh~f~~w~~~ilTDSGgfQ~~sl~~~~~~~e~gv~f~ 315 (319)
.++.|+|--+ ++.+++.-||++||| ||+++||.++|+++||||+||+|++||||||||||||||++++ ++|+||.|+
T Consensus 47 ~gtvk~lt~~-~l~~~g~~iiL~Nty-hL~lrPg~~~i~~~GGLh~Fm~w~~~ilTDSGgfQv~sl~~~~-i~e~Gv~F~ 123 (381)
T 2ash_A 47 NASVKLLTPR-DLEEAGAEIILSNTF-HLMLKPGVEIIKLHRGLHNFMGWKRPILTDSGGFQVFSLPKIR-IDDEGVVFR 123 (381)
T ss_dssp SSSCTTCCHH-HHHHHTCSCEEECCH-HHHHTTCHHHHHHTTSHHHHHTCCSCEEECCCHHHHHTSTTCE-ECSSCEEEE
T ss_pred CCcCCcCCHH-HHHHcCCCEEehhHH-HHhhCCcHHHHHHccChHhhccCCCCeeecccccccccccccc-cCCCCceEe
Confidence 5678898887 888999999999999 9999999999999999999999999999999999999999999 999999999
Q ss_pred CCCC
Q psy14115 316 SPNN 319 (319)
Q Consensus 316 s~~~ 319 (319)
||+|
T Consensus 124 s~~d 127 (381)
T 2ash_A 124 SPID 127 (381)
T ss_dssp CTTT
T ss_pred cCcC
Confidence 9986
No 6
>1iq8_A Archaeosine tRNA-guanine transglycosylase; (alpha/beta)8 barrel, riken structural genomics/proteomics initiative, RSGI; 2.20A {Pyrococcus horikoshii} SCOP: b.122.1.1 c.1.20.1 d.17.6.1 PDB: 1it7_A* 1it8_A* 1j2b_A
Probab=99.69 E-value=6.2e-19 Score=180.65 Aligned_cols=77 Identities=14% Similarity=0.200 Sum_probs=67.6
Q ss_pred cccccccchhhhhcccceeeehhhHHHhhcCccHHHHHHhCCcccccCCCCccccCCCCceeEecccccccccCceeee
Q psy14115 237 PCRSGLRRSLKCLQISTYLVRSETACAVGYVIGVDVLKKAGGLHKFMGWKRALLTDSGGFQMVSLLKFAEITEEGVKFQ 315 (319)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~n~~~~l~~~~g~~~~~~~gglh~f~~w~~~ilTDSGgfQ~~sl~~~~~~~e~gv~f~ 315 (319)
++.|+|--+ ++.+++..||++||| ||+++||.++++++||||+||+|++||||||||||||||+++.-.+|+-+.+|
T Consensus 42 ~~vk~lt~~-~l~~~g~~iil~Nty-hl~lrp~~~~i~~~gGlh~F~~w~~~iltDSGgfQv~s~g~~~ltpe~~~~iq 118 (582)
T 1iq8_A 42 PKQMVVEPK-ELEKMGFEIIITNSY-IIYKDEELRRKALELGIHRMLDYNGIIEVDSGSFQLMKYGSIEVSNREIIEFQ 118 (582)
T ss_dssp SSSCSSCHH-HHHHTTCCEEEEEHH-HHHHCHHHHHHHHHHHHHHHHTCCSEEEEECSTTHHHHSSCCSSCHHHHHHHH
T ss_pred CcCCCCCHH-HHHhcCCCceecchh-heeeCcchhhhhhcCChheeccCCCCceecccccccccccccccCHHHHHHHH
Confidence 568888877 788888889999999 99999999999999999999999999999999999999997655555544444
No 7
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=94.92 E-value=0.19 Score=46.77 Aligned_cols=80 Identities=14% Similarity=0.095 Sum_probs=66.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC---CCCh-HHHHHHHHcCCcEe
Q psy14115 35 GGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG---IGFA-VDLLICCALGADMF 110 (319)
Q Consensus 35 GG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G---vg~P-~~Il~~V~lGvD~F 110 (319)
|-.+++.-.+.++.+.+.+++-++|....+...+.+..++++.+.+.+| +.|.-+.+ .|.+ .+++.++..|+|.|
T Consensus 154 ~~~~~~~~~~~~~~~~~~G~d~i~l~DT~G~~~P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~An~laAv~aGa~~v 232 (302)
T 2ftp_A 154 GDVDPRQVAWVARELQQMGCYEVSLGDTIGVGTAGATRRLIEAVASEVP-RERLAGHFHDTYGQALANIYASLLEGIAVF 232 (302)
T ss_dssp BCCCHHHHHHHHHHHHHTTCSEEEEEESSSCCCHHHHHHHHHHHTTTSC-GGGEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCCCcCHHHHHHHHHHHHHhCC-CCeEEEEeCCCccHHHHHHHHHHHhCCCEE
Confidence 3467888888899999999999999987777889999999999999997 56765553 6764 45999999999999
Q ss_pred ecCCc
Q psy14115 111 DCVFP 115 (319)
Q Consensus 111 D~~~P 115 (319)
|++.-
T Consensus 233 d~tv~ 237 (302)
T 2ftp_A 233 DSSVA 237 (302)
T ss_dssp EEBGG
T ss_pred Eeccc
Confidence 98764
No 8
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=93.48 E-value=0.38 Score=45.04 Aligned_cols=81 Identities=10% Similarity=0.112 Sum_probs=66.6
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC---CCC-hHHHHHHHHcCCcE
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG---IGF-AVDLLICCALGADM 109 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G---vg~-P~~Il~~V~lGvD~ 109 (319)
.|-.+++.-.+.++.+.+.+++-+.|....+...++++.+++..+.+.+| +.|.-+.+ .|. ..+.+.++..|+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~-~~~l~~H~Hnd~Gla~AN~laAv~aGa~~ 229 (307)
T 1ydo_A 151 EKDVPIEQVIRLSEALFEFGISELSLGDTIGAANPAQVETVLEALLARFP-ANQIALHFHDTRGTALANMVTALQMGITV 229 (307)
T ss_dssp TBCCCHHHHHHHHHHHHHHTCSCEEEECSSCCCCHHHHHHHHHHHHTTSC-GGGEEEECBGGGSCHHHHHHHHHHHTCCE
T ss_pred CCCCCHHHHHHHHHHHHhcCCCEEEEcCCCCCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCCchHHHHHHHHHHhCCCE
Confidence 34577888888899999999999999998888899999999999999997 45654432 343 45799999999999
Q ss_pred eecCCc
Q psy14115 110 FDCVFP 115 (319)
Q Consensus 110 FD~~~P 115 (319)
||++.-
T Consensus 230 vd~tv~ 235 (307)
T 1ydo_A 230 FDGSAG 235 (307)
T ss_dssp EEEBGG
T ss_pred EEEccc
Confidence 998864
No 9
>3ewb_X 2-isopropylmalate synthase; LEUA, structural genomics, unknown function, amino-acid biosynthesis; 2.10A {Listeria monocytogenes str}
Probab=93.26 E-value=0.54 Score=43.72 Aligned_cols=91 Identities=11% Similarity=0.043 Sum_probs=72.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCC--CCeEe--cC-CCC-hHHHHHHHHcCCc
Q psy14115 35 GGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKD--KPRYV--MG-IGF-AVDLLICCALGAD 108 (319)
Q Consensus 35 GG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~d--kPr~l--~G-vg~-P~~Il~~V~lGvD 108 (319)
|-.+++.-.+.++.+.+.+.+-+.|....+...+.++.+++..+.+.+|.. .|.-+ .. .|. ..+.+.++..|+|
T Consensus 145 ~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~l~~H~Hnd~Gla~AN~laA~~aGa~ 224 (293)
T 3ewb_X 145 TRSDRAFLIEAVQTAIDAGATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIENGAR 224 (293)
T ss_dssp GGSCHHHHHHHHHHHHHTTCCEEEEECSSSCCCHHHHHHHHHHHHHHCTTGGGSEEEEECBCTTSCHHHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEecCCCCCCCHHHHHHHHHHHHHhcCCccCceEEEEeCCCcChHHHHHHHHHHhCCC
Confidence 346778778889999999999999999888889999999999999999852 34433 21 343 5689999999999
Q ss_pred EeecCCccccCcCCcce
Q psy14115 109 MFDCVFPTRTARFGSAL 125 (319)
Q Consensus 109 ~FD~~~Ptr~Ar~G~al 125 (319)
.||++.--.-.+.|.+=
T Consensus 225 ~vd~sv~GlGeraGN~~ 241 (293)
T 3ewb_X 225 RVEGTINGIGERAGNTA 241 (293)
T ss_dssp EEEEBGGGCCTTTCBCB
T ss_pred EEEeeccccccccccHh
Confidence 99999877666665543
No 10
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=93.23 E-value=0.25 Score=46.86 Aligned_cols=91 Identities=12% Similarity=0.100 Sum_probs=74.7
Q ss_pred CCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEec-----CCCChHHHHHHHHcCCcE
Q psy14115 35 GGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVM-----GIGFAVDLLICCALGADM 109 (319)
Q Consensus 35 GG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~-----Gvg~P~~Il~~V~lGvD~ 109 (319)
...+++--.+.++.+.+.++.-+.+.+..+...++++.++|+.+.+.+|++.|..+. |.| ..+.+.++..|+|.
T Consensus 144 ~~~~~e~~~~ia~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~pi~~H~Hn~~G~a-vAn~laA~~aGa~~ 222 (345)
T 1nvm_A 144 HMIPAEKLAEQGKLMESYGATCIYMADSGGAMSMNDIRDRMRAFKAVLKPETQVGMHAHHNLSLG-VANSIVAVEEGCDR 222 (345)
T ss_dssp TSSCHHHHHHHHHHHHHHTCSEEEEECTTCCCCHHHHHHHHHHHHHHSCTTSEEEEECBCTTSCH-HHHHHHHHHTTCCE
T ss_pred CCCCHHHHHHHHHHHHHCCCCEEEECCCcCccCHHHHHHHHHHHHHhcCCCceEEEEECCCccHH-HHHHHHHHHcCCCE
Confidence 346677667778888888999999999888788999999999999999877887663 443 45789999999999
Q ss_pred eecCCccccCcCCccee
Q psy14115 110 FDCVFPTRTARFGSALV 126 (319)
Q Consensus 110 FD~~~Ptr~Ar~G~alt 126 (319)
||++.--.-.+.|.+=+
T Consensus 223 vd~tv~GlG~~aGN~~l 239 (345)
T 1nvm_A 223 VDASLAGMGAGAGNAPL 239 (345)
T ss_dssp EEEBGGGCSSTTCBCBH
T ss_pred EEecchhccCCccCcCH
Confidence 99998887777776644
No 11
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=93.06 E-value=0.7 Score=43.72 Aligned_cols=85 Identities=14% Similarity=0.111 Sum_probs=67.2
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC---CCC-hHHHHHHHHcCCcEeec
Q psy14115 37 LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG---IGF-AVDLLICCALGADMFDC 112 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G---vg~-P~~Il~~V~lGvD~FD~ 112 (319)
.+++.-.+.++.+.+.+++-+.|....+...++++.+++..+.+.+| +.|.-+.. .|. ..+.+.|+..|+|.||+
T Consensus 166 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~v~~lv~~l~~~~p-~~~i~~H~Hnd~GlA~AN~laAv~aGa~~vd~ 244 (337)
T 3ble_A 166 NSPDYVKSLVEHLSKEHIERIFLPDTLGVLSPEETFQGVDSLIQKYP-DIHFEFHGHNDYDLSVANSLQAIRAGVKGLHA 244 (337)
T ss_dssp HCHHHHHHHHHHHHTSCCSEEEEECTTCCCCHHHHHHHHHHHHHHCT-TSCEEEECBCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCcCHHHHHHHHHHHHHhcC-CCeEEEEecCCcchHHHHHHHHHHhCCCEEEE
Confidence 35666677888899999999999998888899999999999999997 55654432 343 55799999999999999
Q ss_pred CCccccCcCC
Q psy14115 113 VFPTRTARFG 122 (319)
Q Consensus 113 ~~Ptr~Ar~G 122 (319)
+.--.-.+.|
T Consensus 245 tv~GlG~~aG 254 (337)
T 3ble_A 245 SINGLGERAG 254 (337)
T ss_dssp BGGGCSSTTC
T ss_pred eccccccccc
Confidence 8765544433
No 12
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=91.47 E-value=0.83 Score=42.01 Aligned_cols=77 Identities=12% Similarity=0.100 Sum_probs=62.6
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEec---CCCCh-HHHHHHHHcCCcEee
Q psy14115 36 GLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVM---GIGFA-VDLLICCALGADMFD 111 (319)
Q Consensus 36 G~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~---Gvg~P-~~Il~~V~lGvD~FD 111 (319)
-.+++.-.+.++.+.+.+++-++|....+..++++..++++.+.+.+| +.|.-+. +.|.+ .+.+.++..|++.||
T Consensus 151 ~~~~~~~~~~~~~~~~~G~d~i~l~Dt~G~~~P~~~~~lv~~l~~~~~-~~~l~~H~Hn~~Gla~an~l~Ai~aG~~~vd 229 (295)
T 1ydn_A 151 PVTPQAVASVTEQLFSLGCHEVSLGDTIGRGTPDTVAAMLDAVLAIAP-AHSLAGHYHDTGGRALDNIRVSLEKGLRVFD 229 (295)
T ss_dssp ECCHHHHHHHHHHHHHHTCSEEEEEETTSCCCHHHHHHHHHHHHTTSC-GGGEEEEEBCTTSCHHHHHHHHHHHTCCEEE
T ss_pred CCCHHHHHHHHHHHHhcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCcchHHHHHHHHHHhCCCEEE
Confidence 367787888888888999999999987767789999999999999987 3455443 35653 469999999999999
Q ss_pred cC
Q psy14115 112 CV 113 (319)
Q Consensus 112 ~~ 113 (319)
++
T Consensus 230 ~s 231 (295)
T 1ydn_A 230 AS 231 (295)
T ss_dssp EB
T ss_pred ec
Confidence 86
No 13
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=91.28 E-value=0.76 Score=42.76 Aligned_cols=82 Identities=20% Similarity=0.261 Sum_probs=60.4
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi-aGvg~~~t~~ai~la~~A~~ 105 (301)
T 1xky_A 27 NGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVI-AGTGSNNTHASIDLTKKATE 105 (301)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE-EECCCSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEE-eCCCCCCHHHHHHHHHHHHh
Confidence 3678888888899999999999999988532 2467899999998888776666655 57764 33333 3567
Q ss_pred cCCcEeecCCcc
Q psy14115 105 LGADMFDCVFPT 116 (319)
Q Consensus 105 lGvD~FD~~~Pt 116 (319)
+|+|-+=.+-|.
T Consensus 106 ~Gadavlv~~P~ 117 (301)
T 1xky_A 106 VGVDAVMLVAPY 117 (301)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEEcCCC
Confidence 999976555554
No 14
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=91.27 E-value=0.92 Score=42.01 Aligned_cols=83 Identities=13% Similarity=0.034 Sum_probs=62.4
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ ..+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-+
T Consensus 18 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~A~~ 96 (294)
T 3b4u_A 18 DGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIV-TGVLVDSIEDAADQSAEALN 96 (294)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEE-EEECCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE-EeCCCccHHHHHHHHHHHHh
Confidence 4678888888899999999999999988532 2467899999999998887666655 57764 34433 3456
Q ss_pred cCCcEeecCCccc
Q psy14115 105 LGADMFDCVFPTR 117 (319)
Q Consensus 105 lGvD~FD~~~Ptr 117 (319)
+|+|-+=.+-|..
T Consensus 97 ~Gadavlv~~P~y 109 (294)
T 3b4u_A 97 AGARNILLAPPSY 109 (294)
T ss_dssp TTCSEEEECCCCS
T ss_pred cCCCEEEEcCCcC
Confidence 8999776666654
No 15
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=91.08 E-value=0.77 Score=42.82 Aligned_cols=83 Identities=20% Similarity=0.221 Sum_probs=63.3
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+..+...|.++ |+|. ..+.+ .+-+
T Consensus 29 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia-Gvg~~~t~~ai~la~~A~~ 107 (307)
T 3s5o_A 29 TAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLA-GSGCESTQATVEMTVSMAQ 107 (307)
T ss_dssp TSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEE-ECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEE-ecCCCCHHHHHHHHHHHHH
Confidence 4678888888899999999999999999532 24688999999999999887777665 7763 33333 5567
Q ss_pred cCCcEeecCCccc
Q psy14115 105 LGADMFDCVFPTR 117 (319)
Q Consensus 105 lGvD~FD~~~Ptr 117 (319)
+|+|-+=.+-|..
T Consensus 108 ~Gadavlv~~P~y 120 (307)
T 3s5o_A 108 VGADAAMVVTPCY 120 (307)
T ss_dssp TTCSEEEEECCCT
T ss_pred cCCCEEEEcCCCc
Confidence 9999776655554
No 16
>1rqb_A Transcarboxylase 5S subunit; TIM-barrel, carbamylated lysine, transfera; HET: KCX; 1.90A {Propionibacterium freudenreichii subspshermanii} SCOP: a.5.7.2 c.1.10.5 PDB: 1rqe_A 1rqh_A* 1rr2_A* 1u5j_A* 1s3h_A*
Probab=90.57 E-value=0.88 Score=46.12 Aligned_cols=89 Identities=11% Similarity=0.088 Sum_probs=72.1
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC---CCC-hHHHHHHHHcCCcEeec
Q psy14115 37 LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG---IGF-AVDLLICCALGADMFDC 112 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G---vg~-P~~Il~~V~lGvD~FD~ 112 (319)
.+++--.+.++.+.+.+.+-+.|....+...+.++.++|..+.+.+|++.|..+.. .|. ..+.+.|+..|+|.||+
T Consensus 172 ~~~e~~~~~a~~l~~~Gad~I~L~DT~G~~~P~~v~~lv~~l~~~~p~~i~I~~H~Hnd~GlAvAN~laAveAGa~~VD~ 251 (539)
T 1rqb_A 172 HTVEGYVKLAGQLLDMGADSIALKDMAALLKPQPAYDIIKAIKDTYGQKTQINLHCHSTTGVTEVSLMKAIEAGVDVVDT 251 (539)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHHCTTCCEEEEEBCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEeCCCCCCcCHHHHHHHHHHHHHhcCCCceEEEEeCCCCChHHHHHHHHHHhCCCEEEE
Confidence 46777788899999999999999998888899999999999999998666765532 343 55799999999999999
Q ss_pred CCccccCcCCcce
Q psy14115 113 VFPTRTARFGSAL 125 (319)
Q Consensus 113 ~~Ptr~Ar~G~al 125 (319)
+.--...+-|.+=
T Consensus 252 ti~g~GertGN~~ 264 (539)
T 1rqb_A 252 AISSMSLGPGHNP 264 (539)
T ss_dssp BCGGGCSTTSBCB
T ss_pred eccccCCCccChh
Confidence 9875555556543
No 17
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=90.53 E-value=0.76 Score=42.78 Aligned_cols=82 Identities=17% Similarity=0.191 Sum_probs=59.8
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-+
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpVi-aGvg~~~t~~ai~la~~A~~ 104 (303)
T 2wkj_A 26 QQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLI-AHVGCVSTAESQQLAASAKR 104 (303)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEE-EECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEE-EecCCCCHHHHHHHHHHHHh
Confidence 4778888888899999999999999988532 2467899999998888776655544 48764 33433 3457
Q ss_pred cCCcEeecCCcc
Q psy14115 105 LGADMFDCVFPT 116 (319)
Q Consensus 105 lGvD~FD~~~Pt 116 (319)
+|+|-+=.+-|.
T Consensus 105 ~Gadavlv~~P~ 116 (303)
T 2wkj_A 105 YGFDAVSAVTPF 116 (303)
T ss_dssp HTCSEEEEECCC
T ss_pred CCCCEEEecCCC
Confidence 899976554444
No 18
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=90.50 E-value=0.89 Score=42.36 Aligned_cols=82 Identities=18% Similarity=0.255 Sum_probs=60.6
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-+
T Consensus 31 dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~st~~ai~la~~A~~ 109 (304)
T 3cpr_A 31 SGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLI-AGVGTNNTRTSVELAEAAAS 109 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEE-EECCCSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE-ecCCCCCHHHHHHHHHHHHh
Confidence 4778888888899999999999999988532 2467899999998888776666644 58764 34433 3557
Q ss_pred cCCcEeecCCcc
Q psy14115 105 LGADMFDCVFPT 116 (319)
Q Consensus 105 lGvD~FD~~~Pt 116 (319)
+|+|-+=.+-|.
T Consensus 110 ~Gadavlv~~P~ 121 (304)
T 3cpr_A 110 AGADGLLVVTPY 121 (304)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEECCCC
Confidence 999976555554
No 19
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=90.48 E-value=1.5 Score=40.52 Aligned_cols=79 Identities=18% Similarity=0.227 Sum_probs=60.6
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC----CCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG----EAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g----e~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .| .+.+|..++++.+.+.... .+.|+|. ..+.+ .+-
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gt-TGE~~~Ls~eEr~~v~~~~~~~~~g----ViaGvg~~~t~~ai~la~~A~ 88 (288)
T 2nuw_A 14 QGKVNVDALKTHAKNLLEKGIDAIFVNGT-TGLGPALSKDEKRQNLNALYDVTHK----LIFQVGSLNLNDVMELVKFSN 88 (288)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEETST-TTTGGGSCHHHHHHHHHHHTTTCSC----EEEECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCC----eEEeeCCCCHHHHHHHHHHHH
Confidence 47789998889999999999999999885 34 4678999999999988764 6678875 33433 345
Q ss_pred HcCCcEeecCCccc
Q psy14115 104 ALGADMFDCVFPTR 117 (319)
Q Consensus 104 ~lGvD~FD~~~Ptr 117 (319)
++|+|-+=.+-|..
T Consensus 89 ~~Gadavlv~~P~y 102 (288)
T 2nuw_A 89 EMDILGVSSHSPYY 102 (288)
T ss_dssp TSCCSEEEECCCCS
T ss_pred hcCCCEEEEcCCcC
Confidence 68999776665554
No 20
>3bg3_A Pyruvate carboxylase, mitochondrial; TIM barrel, ATP-binding, biotin, disease mutation, gluconeogenesis, ligase, lipid synthesis, manganese; HET: KCX BTI; 2.80A {Homo sapiens} PDB: 3bg9_A
Probab=90.23 E-value=2.4 Score=44.37 Aligned_cols=89 Identities=16% Similarity=0.177 Sum_probs=74.7
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC---CCC-hHHHHHHHHcCCcEeec
Q psy14115 37 LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG---IGF-AVDLLICCALGADMFDC 112 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G---vg~-P~~Il~~V~lGvD~FD~ 112 (319)
.+++--.+.++.+.+.+.+-+.|....+...++++.++|..+.+.+| +.|..+.. .|. ..+.+.|+..|+|.+|+
T Consensus 258 ~~~e~~~~~a~~l~~~Ga~~I~l~DT~G~~~P~~v~~lV~~lk~~~p-~~~I~~H~Hnd~GlAvANslaAveAGa~~VD~ 336 (718)
T 3bg3_A 258 YSLQYYMGLAEELVRAGTHILCIKDMAGLLKPTACTMLVSSLRDRFP-DLPLHIHTHDTSGAGVAAMLACAQAGADVVDV 336 (718)
T ss_dssp TCHHHHHHHHHHHHHHTCSEEEEECTTSCCCHHHHHHHHHHHHHHST-TCCEEEECCCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcCcCCCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCccHHHHHHHHHHHhCCCEEEe
Confidence 47788888999999999999999999888999999999999999998 67776542 343 55799999999999999
Q ss_pred CCccccCcCCccee
Q psy14115 113 VFPTRTARFGSALV 126 (319)
Q Consensus 113 ~~Ptr~Ar~G~alt 126 (319)
+.--.-.+-|.+=+
T Consensus 337 ti~GlGertGN~~l 350 (718)
T 3bg3_A 337 AADSMSGMTSQPSM 350 (718)
T ss_dssp BCGGGCSTTSCCBH
T ss_pred cCcccccccCchhH
Confidence 98877777776643
No 21
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=90.02 E-value=1.4 Score=40.68 Aligned_cols=79 Identities=13% Similarity=0.141 Sum_probs=63.5
Q ss_pred CCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEec---CCCC-hHHHHHHHHcCCcEe
Q psy14115 35 GGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVM---GIGF-AVDLLICCALGADMF 110 (319)
Q Consensus 35 GG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~---Gvg~-P~~Il~~V~lGvD~F 110 (319)
|-.+++.-.+.++.+.+.+++-+.|....+...++++.+++..+.+.+| +.|.-+. ..|. ..+.+.++..|+|.|
T Consensus 151 ~~~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~-~~~i~~H~Hn~~Gla~An~laA~~aGa~~v 229 (298)
T 2cw6_A 151 GKISPAKVAEVTKKFYSMGCYEISLGDTIGVGTPGIMKDMLSAVMQEVP-LAALAVHCHDTYGQALANTLMALQMGVSVV 229 (298)
T ss_dssp BSCCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHSC-GGGEEEEEBCTTSCHHHHHHHHHHTTCCEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEecCCCCCcCHHHHHHHHHHHHHhCC-CCeEEEEECCCCchHHHHHHHHHHhCCCEE
Confidence 3457787888899999999999999988878899999999999998887 3444332 2354 467899999999999
Q ss_pred ecCC
Q psy14115 111 DCVF 114 (319)
Q Consensus 111 D~~~ 114 (319)
|++.
T Consensus 230 d~tv 233 (298)
T 2cw6_A 230 DSSV 233 (298)
T ss_dssp EEBT
T ss_pred Eeec
Confidence 9863
No 22
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=89.96 E-value=1 Score=41.70 Aligned_cols=81 Identities=22% Similarity=0.307 Sum_probs=62.1
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .|| +.+|..++++.+.+......|.++ |+|. ..+.+ .+-
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~ 99 (297)
T 3flu_A 22 DGSIHYEQLRDLIDWHIENGTDGIVAVGT-TGESATLSVEEHTAVIEAVVKHVAKRVPVIA-GTGANNTVEAIALSQAAE 99 (297)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCCEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCcc-ccCcccCCHHHHHHHHHHHHHHhCCCCcEEE-eCCCcCHHHHHHHHHHHH
Confidence 47788888889999999999999999984 455 678999999998888776667665 8764 44433 455
Q ss_pred HcCCcEeecCCcc
Q psy14115 104 ALGADMFDCVFPT 116 (319)
Q Consensus 104 ~lGvD~FD~~~Pt 116 (319)
++|+|-+=.+-|.
T Consensus 100 ~~Gadavlv~~P~ 112 (297)
T 3flu_A 100 KAGADYTLSVVPY 112 (297)
T ss_dssp HTTCSEEEEECCC
T ss_pred HcCCCEEEECCCC
Confidence 7999976555554
No 23
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=89.96 E-value=0.82 Score=42.28 Aligned_cols=81 Identities=17% Similarity=0.137 Sum_probs=60.8
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC----CCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG----EAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g----e~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .| .+.+|..++++.+.+......|.+ .|+|. ..+.+ .+.
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~A~ 92 (294)
T 2ehh_A 15 EGEVDYEALGNLIEFHVDNGTDAILVCGT-TGESPTLTFEEHEKVIEFAVKRAAGRIKVI-AGTGGNATHEAVHLTAHAK 92 (294)
T ss_dssp TTEECHHHHHHHHHHHHTTTCCEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSEEE-EECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCcEE-EecCCCCHHHHHHHHHHHH
Confidence 67899998889999999999999999885 34 467899999998888776656644 57764 34433 455
Q ss_pred HcCCcEeecCCcc
Q psy14115 104 ALGADMFDCVFPT 116 (319)
Q Consensus 104 ~lGvD~FD~~~Pt 116 (319)
++|+|-+=.+-|.
T Consensus 93 ~~Gadavlv~~P~ 105 (294)
T 2ehh_A 93 EVGADGALVVVPY 105 (294)
T ss_dssp HTTCSEEEEECCC
T ss_pred hcCCCEEEECCCC
Confidence 7999976555454
No 24
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=89.53 E-value=0.91 Score=41.92 Aligned_cols=81 Identities=16% Similarity=0.207 Sum_probs=60.0
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.| +|.+.-.+-++.+.+.+++|+.+.|..+ ..+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-+
T Consensus 17 dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi-~Gvg~~~t~~ai~la~~a~~ 94 (291)
T 3a5f_A 17 TG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVI-AGTGSNNTAASIAMSKWAES 94 (291)
T ss_dssp SS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHHHHH
T ss_pred CC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE-EeCCcccHHHHHHHHHHHHh
Confidence 47 8999888999999999999999988522 2467899999998888777666654 58764 33433 4557
Q ss_pred cCCcEeecCCcc
Q psy14115 105 LGADMFDCVFPT 116 (319)
Q Consensus 105 lGvD~FD~~~Pt 116 (319)
+|+|-+=.+-|.
T Consensus 95 ~Gadavlv~~P~ 106 (291)
T 3a5f_A 95 IGVDGLLVITPY 106 (291)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEEcCCC
Confidence 899976555554
No 25
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=89.52 E-value=0.83 Score=42.16 Aligned_cols=81 Identities=16% Similarity=0.201 Sum_probs=60.6
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC----CCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG----EAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g----e~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .| .+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~a~ 92 (289)
T 2yxg_A 15 NKEVDFDGLEENINFLIENGVSGIVAVGT-TGESPTLSHEEHKKVIEKVVDVVNGRVQVI-AGAGSNCTEEAIELSVFAE 92 (289)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTSSEEE-EECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCcEE-EeCCCCCHHHHHHHHHHHH
Confidence 67899998889999999999999999885 34 467899999998888776656654 57764 33333 455
Q ss_pred HcCCcEeecCCcc
Q psy14115 104 ALGADMFDCVFPT 116 (319)
Q Consensus 104 ~lGvD~FD~~~Pt 116 (319)
++|+|-+=.+-|.
T Consensus 93 ~~Gadavlv~~P~ 105 (289)
T 2yxg_A 93 DVGADAVLSITPY 105 (289)
T ss_dssp HHTCSEEEEECCC
T ss_pred hcCCCEEEECCCC
Confidence 7899976555454
No 26
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=89.19 E-value=0.88 Score=43.03 Aligned_cols=83 Identities=17% Similarity=0.151 Sum_probs=60.7
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+......|.++ |+|. ..+.+ .+-+
T Consensus 49 dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia-Gvg~~st~eai~la~~A~~ 127 (332)
T 2r8w_A 49 AGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMA-GIGALRTDEAVALAKDAEA 127 (332)
T ss_dssp TCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEE-EECCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-ecCCCCHHHHHHHHHHHHh
Confidence 4678888888899999999999999988532 24678999999988887776666554 7764 33433 4557
Q ss_pred cCCcEeecCCccc
Q psy14115 105 LGADMFDCVFPTR 117 (319)
Q Consensus 105 lGvD~FD~~~Ptr 117 (319)
+|+|-+=.+-|..
T Consensus 128 ~Gadavlv~~P~Y 140 (332)
T 2r8w_A 128 AGADALLLAPVSY 140 (332)
T ss_dssp HTCSEEEECCCCS
T ss_pred cCCCEEEECCCCC
Confidence 8999776555543
No 27
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=89.10 E-value=2.2 Score=41.05 Aligned_cols=90 Identities=12% Similarity=0.065 Sum_probs=71.1
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCC--CCCeEe--cC-CCC-hHHHHHHHHcCC
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPK--DKPRYV--MG-IGF-AVDLLICCALGA 107 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~--dkPr~l--~G-vg~-P~~Il~~V~lGv 107 (319)
.+-.+++--.+.++.+.+.+.+-+.|....+...+.++.+++..+.+.+|. +.|.-+ .- .|. ..+.+.++..|+
T Consensus 151 ~~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~Hnd~GlAvAN~laAv~aGa 230 (370)
T 3rmj_A 151 ALRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHCHNDLGLAVANSLAALKGGA 230 (370)
T ss_dssp GGGSCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEECBCTTSCHHHHHHHHHHTTC
T ss_pred CCccCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEeCCCCChHHHHHHHHHHhCC
Confidence 445788888888999999999999999998888999999999999999985 245433 21 343 557999999999
Q ss_pred cEeecCCccccCcCCc
Q psy14115 108 DMFDCVFPTRTARFGS 123 (319)
Q Consensus 108 D~FD~~~Ptr~Ar~G~ 123 (319)
|.||++.--.-.|.|.
T Consensus 231 ~~vd~tv~GlGeraGN 246 (370)
T 3rmj_A 231 RQVECTVNGLGERAGN 246 (370)
T ss_dssp CEEEEBGGGCSSTTCB
T ss_pred CEEEEeccccCccccc
Confidence 9999997655554443
No 28
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=89.03 E-value=0.92 Score=41.93 Aligned_cols=82 Identities=18% Similarity=0.244 Sum_probs=60.3
Q ss_pred cCCCCHHHHHHHHHHHHh-CCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVE-KDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~-~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+ .+++|+.+.|..+ -.+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-
T Consensus 18 dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~a~ 96 (293)
T 1f6k_A 18 DGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALI-AQVGSVNLKEAVELGKYAT 96 (293)
T ss_dssp TSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEE-EECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEE-EecCCCCHHHHHHHHHHHH
Confidence 477898888899999999 9999999988422 2467899999998888776656654 58765 33333 355
Q ss_pred HcCCcEeecCCcc
Q psy14115 104 ALGADMFDCVFPT 116 (319)
Q Consensus 104 ~lGvD~FD~~~Pt 116 (319)
++|+|-+=.+-|.
T Consensus 97 ~~Gadavlv~~P~ 109 (293)
T 1f6k_A 97 ELGYDCLSAVTPF 109 (293)
T ss_dssp HHTCSEEEEECCC
T ss_pred hcCCCEEEECCCC
Confidence 6899976555554
No 29
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=88.80 E-value=1.7 Score=40.24 Aligned_cols=80 Identities=15% Similarity=0.158 Sum_probs=60.0
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLLI----CCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il~----~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+.... .+.|+|. ..+.+. +-+
T Consensus 14 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~g----viaGvg~~~t~~ai~la~~A~~ 89 (293)
T 1w3i_A 14 DNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTNK----IIFQVGGLNLDDAIRLAKLSKD 89 (293)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCSC----EEEECCCSCHHHHHHHHHHGGG
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcCC----EEEecCCCCHHHHHHHHHHHHh
Confidence 4778988888999999999999999998532 24678999999999988764 6678875 444443 345
Q ss_pred cCCcEeecCCccc
Q psy14115 105 LGADMFDCVFPTR 117 (319)
Q Consensus 105 lGvD~FD~~~Ptr 117 (319)
+|+|-+=.+-|..
T Consensus 90 ~Gadavlv~~P~y 102 (293)
T 1w3i_A 90 FDIVGIASYAPYY 102 (293)
T ss_dssp SCCSEEEEECCCS
T ss_pred cCCCEEEEcCCCC
Confidence 8999765555543
No 30
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=88.64 E-value=1.6 Score=40.18 Aligned_cols=79 Identities=16% Similarity=0.180 Sum_probs=60.5
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC----CCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG----EAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g----e~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .| .+.+|..++++.+.+.... .+.|+|. ..+.+ .+-
T Consensus 13 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~g----vi~Gvg~~~t~~ai~la~~A~ 87 (286)
T 2r91_A 13 GGRLDPELFANHVKNITSKGVDVVFVAGT-TGLGPALSLQEKMELTDAATSAARR----VIVQVASLNADEAIALAKYAE 87 (286)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEETST-TTTGGGSCHHHHHHHHHHHHHHCSS----EEEECCCSSHHHHHHHHHHHH
T ss_pred CCccCHHHHHHHHHHHHHCCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCC----EEEeeCCCCHHHHHHHHHHHH
Confidence 57789998889999999999999999985 34 4678999999998887764 6678875 33333 455
Q ss_pred HcCCcEeecCCccc
Q psy14115 104 ALGADMFDCVFPTR 117 (319)
Q Consensus 104 ~lGvD~FD~~~Ptr 117 (319)
++|+|-+=.+-|..
T Consensus 88 ~~Gadavlv~~P~y 101 (286)
T 2r91_A 88 SRGAEAVASLPPYY 101 (286)
T ss_dssp HTTCSEEEECCSCS
T ss_pred hcCCCEEEEcCCcC
Confidence 68999776665554
No 31
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=88.61 E-value=0.84 Score=42.39 Aligned_cols=83 Identities=20% Similarity=0.229 Sum_probs=61.3
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-+
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpvi-aGvg~~~t~~ai~la~~A~~ 93 (297)
T 2rfg_A 15 NGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVI-AGAGSNNPVEAVRYAQHAQQ 93 (297)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBE-EECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEE-EccCCCCHHHHHHHHHHHHh
Confidence 5778999888999999999999999988522 2467899999998888777666655 57764 33333 3556
Q ss_pred cCCcEeecCCccc
Q psy14115 105 LGADMFDCVFPTR 117 (319)
Q Consensus 105 lGvD~FD~~~Ptr 117 (319)
+|+|-+=.+-|..
T Consensus 94 ~Gadavlv~~P~y 106 (297)
T 2rfg_A 94 AGADAVLCVAGYY 106 (297)
T ss_dssp HTCSEEEECCCTT
T ss_pred cCCCEEEEcCCCC
Confidence 8999776655543
No 32
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=88.60 E-value=1.3 Score=42.20 Aligned_cols=82 Identities=21% Similarity=0.256 Sum_probs=60.3
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-+
T Consensus 46 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpVi-aGvg~~st~eai~la~~A~~ 124 (343)
T 2v9d_A 46 DGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVL-IGTGGTNARETIELSQHAQQ 124 (343)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE-EECCSSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEE-EecCCCCHHHHHHHHHHHHh
Confidence 4678888888899999999999999998532 2467899999998888777666655 57764 34433 3557
Q ss_pred cCCcEeecCCcc
Q psy14115 105 LGADMFDCVFPT 116 (319)
Q Consensus 105 lGvD~FD~~~Pt 116 (319)
+|+|-+=.+-|.
T Consensus 125 ~Gadavlv~~P~ 136 (343)
T 2v9d_A 125 AGADGIVVINPY 136 (343)
T ss_dssp HTCSEEEEECCS
T ss_pred cCCCEEEECCCC
Confidence 899976555454
No 33
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=88.46 E-value=0.8 Score=42.33 Aligned_cols=82 Identities=22% Similarity=0.229 Sum_probs=61.0
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ ..+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-+
T Consensus 15 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~A~~ 93 (292)
T 2vc6_A 15 DDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVI-AGAGSNSTAEAIAFVRHAQN 93 (292)
T ss_dssp TTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBE-EECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEE-EecCCccHHHHHHHHHHHHH
Confidence 5778999888999999999999999988522 2467899999998888776666655 47764 33333 3567
Q ss_pred cCCcEeecCCcc
Q psy14115 105 LGADMFDCVFPT 116 (319)
Q Consensus 105 lGvD~FD~~~Pt 116 (319)
+|+|-+=.+-|.
T Consensus 94 ~Gadavlv~~P~ 105 (292)
T 2vc6_A 94 AGADGVLIVSPY 105 (292)
T ss_dssp TTCSEEEEECCC
T ss_pred cCCCEEEEcCCC
Confidence 999976555554
No 34
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=88.28 E-value=0.94 Score=41.85 Aligned_cols=82 Identities=16% Similarity=0.144 Sum_probs=60.0
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLLI----CCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il~----~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+......|.+ .|+|. ..+.+. +-+
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi-aGvg~~~t~~ai~la~~a~~ 94 (292)
T 2ojp_A 16 KGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVI-AGTGANATAEAISLTQRFND 94 (292)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEE-EECCCSSHHHHHHHHHHTTT
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEE-EecCCccHHHHHHHHHHHHh
Confidence 4778988888899999999999999988532 2467899999998888777666654 57764 444443 345
Q ss_pred cCCcEeecCCcc
Q psy14115 105 LGADMFDCVFPT 116 (319)
Q Consensus 105 lGvD~FD~~~Pt 116 (319)
+|+|-+=.+-|.
T Consensus 95 ~Gadavlv~~P~ 106 (292)
T 2ojp_A 95 SGIVGCLTVTPY 106 (292)
T ss_dssp SSCSEEEEECCC
T ss_pred cCCCEEEECCCC
Confidence 899976555444
No 35
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=88.05 E-value=2 Score=42.63 Aligned_cols=87 Identities=18% Similarity=0.163 Sum_probs=70.0
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC---CCC-hHHHHHHHHcCCcEeec
Q psy14115 37 LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG---IGF-AVDLLICCALGADMFDC 112 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G---vg~-P~~Il~~V~lGvD~FD~ 112 (319)
.+++--.+.++++.+.+.+-+.|....+...+.+..++|..+.+.+ +.|..+.+ .|. ..+.+.|+..|+|.||+
T Consensus 155 ~~~e~~~~~a~~l~~~Gad~I~l~DT~G~~~P~~v~~lv~~l~~~~--~~~i~~H~Hnd~GlAvAN~laAv~AGa~~VD~ 232 (464)
T 2nx9_A 155 HNLQTWVDVAQQLAELGVDSIALKDMAGILTPYAAEELVSTLKKQV--DVELHLHCHSTAGLADMTLLKAIEAGVDRVDT 232 (464)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEETTSCCCHHHHHHHHHHHHHHC--CSCEEEEECCTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCCcCHHHHHHHHHHHHHhc--CCeEEEEECCCCChHHHHHHHHHHhCCCEEEE
Confidence 4677778889999999999999999888889999999999998887 46665432 343 55899999999999999
Q ss_pred CCccccCcCCcce
Q psy14115 113 VFPTRTARFGSAL 125 (319)
Q Consensus 113 ~~Ptr~Ar~G~al 125 (319)
+.--...+-|.+=
T Consensus 233 ti~g~gertGN~~ 245 (464)
T 2nx9_A 233 AISSMSGTYGHPA 245 (464)
T ss_dssp BCGGGCSTTSCCB
T ss_pred eccccCCCCcCHH
Confidence 9876655566553
No 36
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=87.81 E-value=1.3 Score=41.11 Aligned_cols=82 Identities=18% Similarity=0.241 Sum_probs=62.7
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCC-CCCeEecCCCC--hHHHH----HH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPK-DKPRYVMGIGF--AVDLL----IC 102 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~-dkPr~l~Gvg~--P~~Il----~~ 102 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .|| +.+|..++++.+.+.... ..|.++ |+|. ..+.+ .+
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~g~rvpvia-Gvg~~~t~~ai~la~~a 99 (301)
T 3m5v_A 22 NGKVDEQSYARLIKRQIENGIDAVVPVGT-TGESATLTHEEHRTCIEIAVETCKGTKVKVLA-GAGSNATHEAVGLAKFA 99 (301)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEECSST-TTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEE-ECCCSSHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCCeEEE-eCCCCCHHHHHHHHHHH
Confidence 67799998889999999999999999884 455 678999999999888876 566655 8863 44444 45
Q ss_pred HHcCCcEeecCCccc
Q psy14115 103 CALGADMFDCVFPTR 117 (319)
Q Consensus 103 V~lGvD~FD~~~Ptr 117 (319)
-++|+|-+=.+-|..
T Consensus 100 ~~~Gadavlv~~P~y 114 (301)
T 3m5v_A 100 KEHGADGILSVAPYY 114 (301)
T ss_dssp HHTTCSEEEEECCCS
T ss_pred HHcCCCEEEEcCCCC
Confidence 579999765555543
No 37
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=87.80 E-value=1.3 Score=41.41 Aligned_cols=82 Identities=18% Similarity=0.171 Sum_probs=62.6
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.| +.|| +.+|..++++.+.+......|.++ |+|. ..+.+ .+-
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~gl~v~G-tTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~A~ 100 (309)
T 3fkr_A 23 TGDLDLASQKRAVDFMIDAGSDGLCILA-NFSEQFAITDDERDVLTRTILEHVAGRVPVIV-TTSHYSTQVCAARSLRAQ 100 (309)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSCEEESS-GGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECc-cccCcccCCHHHHHHHHHHHHHHhCCCCcEEE-ecCCchHHHHHHHHHHHH
Confidence 4778988888999999999999999998 4455 688999999998887766666654 6653 44433 556
Q ss_pred HcCCcEeecCCccc
Q psy14115 104 ALGADMFDCVFPTR 117 (319)
Q Consensus 104 ~lGvD~FD~~~Ptr 117 (319)
++|+|-+=.+-|..
T Consensus 101 ~~Gadavlv~~Pyy 114 (309)
T 3fkr_A 101 QLGAAMVMAMPPYH 114 (309)
T ss_dssp HTTCSEEEECCSCB
T ss_pred HcCCCEEEEcCCCC
Confidence 79999877766653
No 38
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=87.66 E-value=2.3 Score=40.78 Aligned_cols=86 Identities=15% Similarity=0.137 Sum_probs=62.4
Q ss_pred CceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---------------CCC----HHHHHHHHHHhhcCCCCCCC
Q psy14115 27 QNIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---------------GEA----KEDFWYSVLVSINCLPKDKP 87 (319)
Q Consensus 27 q~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---------------ge~----~~e~~~ii~~~~~~LP~dkP 87 (319)
..++.=+-.+.+.+.-.+.++.+.+.+++|+.+-+-.. |.+ +..-+++|..+.+.+|.+.|
T Consensus 221 ~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ntt~~r~~~~~~~~~~~~gGlSG~~i~p~a~~~v~~i~~~v~~~ip 300 (367)
T 3zwt_A 221 PAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVTNTTVSRPAGLQGALRSETGGLSGKPLRDLSTQTIREMYALTQGRVP 300 (367)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEECCCBSCCCTTCCCTTTTSSSEEEEGGGHHHHHHHHHHHHHHTTTCSC
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEeCCCcccccccccccccccCCcCCcccchhHHHHHHHHHHHcCCCce
Confidence 45666666667665556677777788999999765321 111 12235788888888888889
Q ss_pred eEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 88 RYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 88 r~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.... |+.+++++..++..|+|.+-.
T Consensus 301 vI~~GGI~s~~da~~~l~~GAd~V~v 326 (367)
T 3zwt_A 301 IIGVGGVSSGQDALEKIRAGASLVQL 326 (367)
T ss_dssp EEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred EEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 9876 689999999999999997754
No 39
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=87.57 E-value=1.9 Score=39.78 Aligned_cols=82 Identities=24% Similarity=0.264 Sum_probs=62.9
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.| +.|| +.+|..++++.+.+......|.++ |+|. ..+.+ .+-
T Consensus 16 dg~iD~~~l~~lv~~li~~Gv~gl~~~G-ttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvia-Gvg~~~t~~ai~la~~a~ 93 (291)
T 3tak_A 16 DGGVDWKSLEKLVEWHIEQGTNSIVAVG-TTGEASTLSMEEHTQVIKEIIRVANKRIPIIA-GTGANSTREAIELTKAAK 93 (291)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEECc-cccccccCCHHHHHHHHHHHHHHhCCCCeEEE-eCCCCCHHHHHHHHHHHH
Confidence 4778888888899999999999999999 4565 789999999998888776666665 8764 44443 456
Q ss_pred HcCCcEeecCCccc
Q psy14115 104 ALGADMFDCVFPTR 117 (319)
Q Consensus 104 ~lGvD~FD~~~Ptr 117 (319)
++|+|-+=.+-|..
T Consensus 94 ~~Gadavlv~~P~y 107 (291)
T 3tak_A 94 DLGADAALLVTPYY 107 (291)
T ss_dssp HHTCSEEEEECCCS
T ss_pred hcCCCEEEEcCCCC
Confidence 79999765555543
No 40
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=87.51 E-value=2.1 Score=40.38 Aligned_cols=89 Identities=12% Similarity=0.135 Sum_probs=69.8
Q ss_pred eccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCC--CCCeEecC---CCC-hHHHHHHHHc
Q psy14115 32 IVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPK--DKPRYVMG---IGF-AVDLLICCAL 105 (319)
Q Consensus 32 iVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~--dkPr~l~G---vg~-P~~Il~~V~l 105 (319)
+-.|-.+++.-.+.++.+.+.+.+-+.|....+...+.++.+++..+.+.+|. +.|.-+.. .|. -.+.+.++..
T Consensus 143 ~d~~~~~~~~~~~~~~~~~~~G~~~i~l~DT~G~~~P~~v~~lv~~l~~~~~~~~~~~i~~H~Hnd~GlA~AN~laA~~a 222 (325)
T 3eeg_A 143 EDAGRADQAFLARMVEAVIEAGADVVNIPDTTGYMLPWQYGERIKYLMDNVSNIDKAILSAHCHNDLGLATANSLAALQN 222 (325)
T ss_dssp ETGGGSCHHHHHHHHHHHHHHTCSEEECCBSSSCCCHHHHHHHHHHHHHHCSCGGGSEEEECBCCTTSCHHHHHHHHHHH
T ss_pred cccccchHHHHHHHHHHHHhcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCCCceEEEEEeCCCCCHHHHHHHHHHHh
Confidence 33444777877888999999999999999998888999999999999999984 35554421 343 4579999999
Q ss_pred CCcEeecCCccccCc
Q psy14115 106 GADMFDCVFPTRTAR 120 (319)
Q Consensus 106 GvD~FD~~~Ptr~Ar 120 (319)
|+|.||++.--.-.+
T Consensus 223 Ga~~vd~tv~GlGer 237 (325)
T 3eeg_A 223 GARQVECTINGIGER 237 (325)
T ss_dssp TCCEEEEBGGGCCST
T ss_pred CCCEEEEeccccccc
Confidence 999999987554443
No 41
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=87.41 E-value=1.3 Score=41.18 Aligned_cols=82 Identities=23% Similarity=0.227 Sum_probs=60.8
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+......|.+ .|+|. ..+.+ .+-+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVi-aGvg~~st~~ai~la~~A~~ 105 (306)
T 1o5k_A 27 NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVI-VGAGTNSTEKTLKLVKQAEK 105 (306)
T ss_dssp TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEE-EECCCSCHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEE-EcCCCccHHHHHHHHHHHHh
Confidence 6789999888999999999999999988522 2467899999998888776666655 57764 33433 3557
Q ss_pred cCCcEeecCCcc
Q psy14115 105 LGADMFDCVFPT 116 (319)
Q Consensus 105 lGvD~FD~~~Pt 116 (319)
+|+|-+=.+-|.
T Consensus 106 ~Gadavlv~~P~ 117 (306)
T 1o5k_A 106 LGANGVLVVTPY 117 (306)
T ss_dssp HTCSEEEEECCC
T ss_pred cCCCEEEECCCC
Confidence 899976555444
No 42
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=87.21 E-value=1.2 Score=40.38 Aligned_cols=82 Identities=15% Similarity=0.061 Sum_probs=56.8
Q ss_pred CceeeeccCCC-CHHHHHHHHHHHHhCCCceEEeCCCCC-------------------CCCHHHHHHHHHHhhcCCCCCC
Q psy14115 27 QNIFPIVQGGL-DEALRKDCAHQMVEKDVNGFAVGGLSG-------------------GEAKEDFWYSVLVSINCLPKDK 86 (319)
Q Consensus 27 q~lfgiVqGG~-~~dlR~~s~~~l~~~~~~G~aIgGl~~-------------------ge~~~e~~~ii~~~~~~LP~dk 86 (319)
..+.+.|..|. +.+.-.+-++.|.+.+++.+-+|..-. |.+.+...+++..+++.+| +.
T Consensus 17 ~~~i~~i~~g~p~~~~~~~~~~~l~~~G~D~IElG~P~sdP~adgp~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~-~~ 95 (262)
T 2ekc_A 17 KALVSYLMVGYPDYETSLKAFKEVLKNGTDILEIGFPFSDPVADGPTIQVAHEVALKNGIRFEDVLELSETLRKEFP-DI 95 (262)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSEEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCT-TS
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHHcCCCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhhcC-CC
Confidence 45666665554 445556678888899999999987432 2233456677888887754 68
Q ss_pred CeEecCCCCh-------HHHHHHHHcCCcE
Q psy14115 87 PRYVMGIGFA-------VDLLICCALGADM 109 (319)
Q Consensus 87 Pr~l~Gvg~P-------~~Il~~V~lGvD~ 109 (319)
|..+|+...| ..+-.+.+.|+|-
T Consensus 96 Pi~~m~y~n~v~~~g~~~f~~~~~~aG~dg 125 (262)
T 2ekc_A 96 PFLLMTYYNPIFRIGLEKFCRLSREKGIDG 125 (262)
T ss_dssp CEEEECCHHHHHHHCHHHHHHHHHHTTCCE
T ss_pred CEEEEecCcHHHHhhHHHHHHHHHHcCCCE
Confidence 9999876665 3345688999994
No 43
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=86.70 E-value=3.7 Score=37.64 Aligned_cols=85 Identities=15% Similarity=-0.022 Sum_probs=59.6
Q ss_pred ceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCC------------------------CCC-HHHHHHHHHHhhcCC
Q psy14115 28 NIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSG------------------------GEA-KEDFWYSVLVSINCL 82 (319)
Q Consensus 28 ~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~------------------------ge~-~~e~~~ii~~~~~~L 82 (319)
.++.=+-++.+.+.-.+.++.+.+.+++++.+.+... |.. ...-++.+..+.+.+
T Consensus 160 Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~~~~~~g~~i~~~~~~~~~~~~~~~gG~sg~~~~~~~~~~i~~v~~~~ 239 (311)
T 1jub_A 160 PLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSVNSIGNGLFIDPEAESVVIKPKDGFGGIGGAYIKPTALANVRAFYTRL 239 (311)
T ss_dssp CEEEEECCCCSHHHHHHHHHHHTTSCCCEEEECCCEEEEECEETTTTEESCSGGGGEEEEESGGGHHHHHHHHHHHHTTS
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHcCCcEEEecCCCCcCceeccCCCCcccccCCCCCccccccccHHHHHHHHHHHHhc
Confidence 3444444556655445557777888999988765420 111 123467888888888
Q ss_pred CCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 83 PKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 83 P~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.+.|.... |+.+|+++..+++.|+|.+-.
T Consensus 240 ~~~ipvi~~GGI~~~~da~~~l~~GAd~V~v 270 (311)
T 1jub_A 240 KPEIQIIGTGGIETGQDAFEHLLCGATMLQI 270 (311)
T ss_dssp CTTSEEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred CCCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 878898875 689999999999999998743
No 44
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=85.71 E-value=3.2 Score=38.85 Aligned_cols=81 Identities=22% Similarity=0.299 Sum_probs=62.2
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .|| +.+|..++++.+.+......|.++ |+|. ..+.+ .+-
T Consensus 37 dg~iD~~~l~~li~~li~~Gv~Gl~v~Gt-TGE~~~Ls~~Er~~v~~~~v~~~~grvpVia-Gvg~~st~~ai~la~~A~ 114 (315)
T 3si9_A 37 NGAIDEKAFCNFVEWQITQGINGVSPVGT-TGESPTLTHEEHKRIIELCVEQVAKRVPVVA-GAGSNSTSEAVELAKHAE 114 (315)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEECSST-TTTGGGSCHHHHHHHHHHHHHHHTTSSCBEE-ECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCcc-ccCccccCHHHHHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHH
Confidence 47788888888999999999999999994 454 678999999998888777677665 8763 44443 466
Q ss_pred HcCCcEeecCCcc
Q psy14115 104 ALGADMFDCVFPT 116 (319)
Q Consensus 104 ~lGvD~FD~~~Pt 116 (319)
++|+|-+=.+-|.
T Consensus 115 ~~Gadavlv~~P~ 127 (315)
T 3si9_A 115 KAGADAVLVVTPY 127 (315)
T ss_dssp HTTCSEEEEECCC
T ss_pred hcCCCEEEECCCC
Confidence 7999976555444
No 45
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=85.45 E-value=2.7 Score=39.29 Aligned_cols=83 Identities=18% Similarity=0.244 Sum_probs=63.3
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCCCCCeEecCCC--ChHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPKDKPRYVMGIG--FAVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~dkPr~l~Gvg--~P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .|| +.+|..++++.+.+......|.++ |+| +..+.+ .+-
T Consensus 39 dg~iD~~~l~~lv~~li~~Gv~Gi~v~Gt-TGE~~~Ls~~Er~~v~~~~v~~~~grvpVia-Gvg~~~t~~ai~la~~A~ 116 (315)
T 3na8_A 39 DGGLDLPALGRSIERLIDGGVHAIAPLGS-TGEGAYLSDPEWDEVVDFTLKTVAHRVPTIV-SVSDLTTAKTVRRAQFAE 116 (315)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCSEEECSSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSCBEE-ECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-ecCCCCHHHHHHHHHHHH
Confidence 46788888888999999999999999994 444 678999999998888777777765 776 344433 456
Q ss_pred HcCCcEeecCCcccc
Q psy14115 104 ALGADMFDCVFPTRT 118 (319)
Q Consensus 104 ~lGvD~FD~~~Ptr~ 118 (319)
++|+|-+=.+-|...
T Consensus 117 ~~Gadavlv~~P~y~ 131 (315)
T 3na8_A 117 SLGAEAVMVLPISYW 131 (315)
T ss_dssp HTTCSEEEECCCCSS
T ss_pred hcCCCEEEECCCCCC
Confidence 799997766655443
No 46
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=85.44 E-value=3.1 Score=38.68 Aligned_cols=81 Identities=23% Similarity=0.343 Sum_probs=61.4
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCCCCCeEecCCC--ChHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPKDKPRYVMGIG--FAVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~dkPr~l~Gvg--~P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .|| +.+|..++++.+.+......|.++ |+| +..+.+ .+-
T Consensus 30 dg~iD~~~l~~lv~~li~~Gv~gi~v~Gt-tGE~~~Lt~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~ 107 (304)
T 3l21_A 30 DGSLDTATAARLANHLVDQGCDGLVVSGT-TGESPTTTDGEKIELLRAVLEAVGDRARVIA-GAGTYDTAHSIRLAKACA 107 (304)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEESST-TTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE-ECCCSCHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCcc-ccchhhCCHHHHHHHHHHHHHHhCCCCeEEE-eCCCCCHHHHHHHHHHHH
Confidence 46788888889999999999999999984 455 688999999998888776666655 776 344433 455
Q ss_pred HcCCcEeecCCcc
Q psy14115 104 ALGADMFDCVFPT 116 (319)
Q Consensus 104 ~lGvD~FD~~~Pt 116 (319)
++|+|-+=.+-|.
T Consensus 108 ~~Gadavlv~~P~ 120 (304)
T 3l21_A 108 AEGAHGLLVVTPY 120 (304)
T ss_dssp HHTCSEEEEECCC
T ss_pred HcCCCEEEECCCC
Confidence 7999976555554
No 47
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=85.39 E-value=10 Score=35.10 Aligned_cols=85 Identities=15% Similarity=0.047 Sum_probs=59.1
Q ss_pred ceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC---------------CC----HHHHHHHHHHhhcCCCCCCCe
Q psy14115 28 NIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG---------------EA----KEDFWYSVLVSINCLPKDKPR 88 (319)
Q Consensus 28 ~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g---------------e~----~~e~~~ii~~~~~~LP~dkPr 88 (319)
.++.=+-++.+.+.-.+-++.+.+.+++++.+.+-..+ .+ ....++.+..+.+.++.+.|.
T Consensus 213 Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn~~~~~~~~~~~~~~~~~gg~~g~~~~~~~~~~i~~i~~~~~~~ipV 292 (336)
T 1f76_A 213 PIAVKIAPDLSEEELIQVADSLVRHNIDGVIATNTTLDRSLVQGMKNCDQTGGLSGRPLQLKSTEIIRRLSLELNGRLPI 292 (336)
T ss_dssp CEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECCCBCCCTTSTTSTTTTCSSEEEEGGGHHHHHHHHHHHHHHHTTSSCE
T ss_pred ceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCcccccccccccccccCCCcCCchhHHHHHHHHHHHHHHhCCCCCE
Confidence 35545556666554456677888899999998764211 11 112346667777777777888
Q ss_pred Eec-CCCChHHHHHHHHcCCcEeec
Q psy14115 89 YVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 89 ~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
... |+.+|+++..+++.|+|++-.
T Consensus 293 i~~GGI~~~~da~~~l~~GAd~V~i 317 (336)
T 1f76_A 293 IGVGGIDSVIAAREKIAAGASLVQI 317 (336)
T ss_dssp EEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred EEECCCCCHHHHHHHHHCCCCEEEe
Confidence 876 689999999999999998743
No 48
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=85.19 E-value=2.6 Score=39.27 Aligned_cols=80 Identities=18% Similarity=0.124 Sum_probs=60.9
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC----CCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG----EAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g----e~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .| .+.+|..++++.+.+.. ...|.++ |+|. ..+.+ .+-
T Consensus 23 dg~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Lt~~Er~~v~~~~v~~~-grvpVia-Gvg~~~t~~ai~la~~A~ 99 (313)
T 3dz1_A 23 DGKIDDVSIDRLTDFYAEVGCEGVTVLGI-LGEAPKLDAAEAEAVATRFIKRA-KSMQVIV-GVSAPGFAAMRRLARLSM 99 (313)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSEEEESTG-GGTGGGSCHHHHHHHHHHHHHHC-TTSEEEE-ECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHCCCCEEEeCcc-CcChhhCCHHHHHHHHHHHHHHc-CCCcEEE-ecCCCCHHHHHHHHHHHH
Confidence 46788888889999999999999999984 44 46789999999998888 5566554 8863 44433 455
Q ss_pred HcCCcEeecCCcc
Q psy14115 104 ALGADMFDCVFPT 116 (319)
Q Consensus 104 ~lGvD~FD~~~Pt 116 (319)
++|+|-+=.+-|.
T Consensus 100 ~~Gadavlv~~P~ 112 (313)
T 3dz1_A 100 DAGAAGVMIAPPP 112 (313)
T ss_dssp HHTCSEEEECCCT
T ss_pred HcCCCEEEECCCC
Confidence 7999977666554
No 49
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=85.03 E-value=3.5 Score=39.63 Aligned_cols=80 Identities=19% Similarity=0.281 Sum_probs=60.1
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHHH----HH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLLI----CC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il~----~V 103 (319)
.|.+|.+.-++-++.+.+.+++|+.+.| +.|| +.+|..++++.+.+......|.++ |+|. ..+.+. +-
T Consensus 74 dg~ID~~al~~lv~~li~~Gv~Gl~v~G-TTGE~~~Ls~eEr~~vi~~~ve~~~grvpVia-Gvg~~st~eai~la~~A~ 151 (360)
T 4dpp_A 74 DGRFDLEAYDDLVNIQIQNGAEGVIVGG-TTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIG-NTGSNSTREAIHATEQGF 151 (360)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCEEEESS-TTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEE-ECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEecc-cccChhhCCHHHHHHHHHHHHHHhCCCCeEEE-ecCCCCHHHHHHHHHHHH
Confidence 4778888888899999999999999998 4455 678999999988887766566554 7763 445443 44
Q ss_pred HcCCcEeecCCc
Q psy14115 104 ALGADMFDCVFP 115 (319)
Q Consensus 104 ~lGvD~FD~~~P 115 (319)
++|+|-+=.+-|
T Consensus 152 ~~Gadavlvv~P 163 (360)
T 4dpp_A 152 AVGMHAALHINP 163 (360)
T ss_dssp HTTCSEEEEECC
T ss_pred HcCCCEEEEcCC
Confidence 689996655544
No 50
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=84.88 E-value=2 Score=40.31 Aligned_cols=83 Identities=17% Similarity=0.197 Sum_probs=62.8
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.+.+......|.++ |+|. ..+.+ .+-+
T Consensus 26 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~ 104 (318)
T 3qfe_A 26 TDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMA-GVGAHSTRQVLEHINDASV 104 (318)
T ss_dssp TTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEE-ECCCSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHHH
Confidence 4678888888899999999999999998532 24678999999998888876677665 8763 44433 4557
Q ss_pred cCCcEeecCCccc
Q psy14115 105 LGADMFDCVFPTR 117 (319)
Q Consensus 105 lGvD~FD~~~Ptr 117 (319)
+|+|-+=.+-|..
T Consensus 105 ~Gadavlv~~P~y 117 (318)
T 3qfe_A 105 AGANYVLVLPPAY 117 (318)
T ss_dssp HTCSEEEECCCCC
T ss_pred cCCCEEEEeCCcc
Confidence 9999777776643
No 51
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=84.25 E-value=2.8 Score=39.22 Aligned_cols=82 Identities=21% Similarity=0.187 Sum_probs=61.9
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .|| +.+|+.++++.+.+......|.++ |+|. ..+.+ .+-
T Consensus 38 dg~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~~Er~~v~~~~v~~~~grvpVia-Gvg~~st~eai~la~~A~ 115 (314)
T 3qze_A 38 QGRLDWDSLAKLVDFHLQEGTNAIVAVGT-TGESATLDVEEHIQVIRRVVDQVKGRIPVIA-GTGANSTREAVALTEAAK 115 (314)
T ss_dssp TSCBCHHHHHHHHHHHHHHTCCEEEESSG-GGTGGGCCHHHHHHHHHHHHHHHTTSSCEEE-ECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCCCcCHHHHHHHHHHHH
Confidence 46788888888999999999999999884 454 788999999988888776667655 8764 44444 455
Q ss_pred HcCCcEeecCCccc
Q psy14115 104 ALGADMFDCVFPTR 117 (319)
Q Consensus 104 ~lGvD~FD~~~Ptr 117 (319)
++|+|-+=.+-|..
T Consensus 116 ~~Gadavlv~~P~y 129 (314)
T 3qze_A 116 SGGADACLLVTPYY 129 (314)
T ss_dssp HTTCSEEEEECCCS
T ss_pred HcCCCEEEEcCCCC
Confidence 79999765555543
No 52
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=82.94 E-value=6.6 Score=37.60 Aligned_cols=75 Identities=23% Similarity=0.284 Sum_probs=50.5
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHH--HH------------------------HHHHHHhhcCCCCCC
Q psy14115 33 VQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKE--DF------------------------WYSVLVSINCLPKDK 86 (319)
Q Consensus 33 VqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~--e~------------------------~~ii~~~~~~LP~dk 86 (319)
|.+|..+ +-++.+.+.+++++.++|- +|.+.. |. ...|..+.+.+| +.
T Consensus 195 vG~g~s~----~~A~~l~~aGad~I~V~g~-GGt~~~~iE~~R~~~~~~~~~~~~~~~~~~g~pt~~~l~~v~~~~~-~i 268 (368)
T 3vkj_A 195 SGNGISM----ETAKLLYSYGIKNFDTSGQ-GGTNWIAIEMIRDIRRGNWKAESAKNFLDWGVPTAASIMEVRYSVP-DS 268 (368)
T ss_dssp SSSCCCH----HHHHHHHHTTCCEEECCCB-TSBCHHHHHHHHHHHTTCTHHHHHHHTTTCSCBHHHHHHHHHHHST-TC
T ss_pred CCCCCCH----HHHHHHHhCCCCEEEEeCC-CCCcccchhhhhcccccccchhhccccccccccHHHHHHHHHHHcC-CC
Confidence 4555654 3577888899999999885 342111 00 023344555555 56
Q ss_pred CeEec-CCCChHHHHHHHHcCCcEeecC
Q psy14115 87 PRYVM-GIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 87 Pr~l~-Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
|.... |+-+|.|++.++++|+|.+=..
T Consensus 269 pvia~GGI~~~~d~~kal~lGA~~v~ig 296 (368)
T 3vkj_A 269 FLVGSGGIRSGLDAAKAIALGADIAGMA 296 (368)
T ss_dssp EEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred cEEEECCCCCHHHHHHHHHcCCCEEEEc
Confidence 77776 6899999999999999976544
No 53
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=81.53 E-value=2.8 Score=39.19 Aligned_cols=82 Identities=20% Similarity=0.223 Sum_probs=61.9
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCCCCCeEecCCC-ChHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPKDKPRYVMGIG-FAVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~dkPr~l~Gvg-~P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .|| +.+|..++++.+.+......|.++ |+| +..+.+ .+-+
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~eEr~~v~~~~v~~~~grvpVia-Gvg~~t~~ai~la~~A~~ 104 (316)
T 3e96_A 27 DGSIDWHHYKETVDRIVDNGIDVIVPCGN-TSEFYALSLEEAKEEVRRTVEYVHGRALVVA-GIGYATSTAIELGNAAKA 104 (316)
T ss_dssp TCCBCHHHHHHHHHHHHTTTCCEECTTSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE-EECSSHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEeCcc-ccCcccCCHHHHHHHHHHHHHHhCCCCcEEE-EeCcCHHHHHHHHHHHHh
Confidence 57788888889999999999999999994 454 788999999998888776666554 665 344433 3557
Q ss_pred cCCcEeecCCccc
Q psy14115 105 LGADMFDCVFPTR 117 (319)
Q Consensus 105 lGvD~FD~~~Ptr 117 (319)
+|+|-+=.+-|..
T Consensus 105 ~Gadavlv~~P~y 117 (316)
T 3e96_A 105 AGADAVMIHMPIH 117 (316)
T ss_dssp HTCSEEEECCCCC
T ss_pred cCCCEEEEcCCCC
Confidence 8999877665553
No 54
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=81.05 E-value=3.6 Score=38.42 Aligned_cols=83 Identities=13% Similarity=0.074 Sum_probs=60.7
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCC---CCCCHHHHHHHHHHhhcCCCCCCCeEecCCCC-hHHHH----HHHHc
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLS---GGEAKEDFWYSVLVSINCLPKDKPRYVMGIGF-AVDLL----ICCAL 105 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~---~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~-P~~Il----~~V~l 105 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|.. ...+.+|..++++.+.+......|.++ |+|. ..+.+ .+-++
T Consensus 27 dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpVia-Gvg~st~~ai~la~~A~~~ 105 (314)
T 3d0c_A 27 TREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVA-GIGYSVDTAIELGKSAIDS 105 (314)
T ss_dssp TCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEE-EECSSHHHHHHHHHHHHHT
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEe-cCCcCHHHHHHHHHHHHHc
Confidence 477888888889999999999999998852 224678999999988887776666554 6653 33333 34568
Q ss_pred CCcEeecCCccc
Q psy14115 106 GADMFDCVFPTR 117 (319)
Q Consensus 106 GvD~FD~~~Ptr 117 (319)
|+|-+=.+-|..
T Consensus 106 Gadavlv~~P~y 117 (314)
T 3d0c_A 106 GADCVMIHQPVH 117 (314)
T ss_dssp TCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 999776655543
No 55
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=79.66 E-value=7.4 Score=36.22 Aligned_cols=81 Identities=11% Similarity=0.178 Sum_probs=60.3
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC----CCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG----EAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g----e~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .| .+.+|..++++.+.+......|.++ |+|. ..+.+ .+-
T Consensus 22 dg~iD~~~l~~lv~~li~~Gv~Gl~v~Gt-TGE~~~Ls~~Er~~v~~~~~~~~~grvpVia-Gvg~~~t~~ai~la~~A~ 99 (311)
T 3h5d_A 22 DGSINFDAIPALIEHLLAHHTDGILLAGT-TAESPTLTHDEELELFAAVQKVVNGRVPLIA-GVGTNDTRDSIEFVKEVA 99 (311)
T ss_dssp TSSBCTTHHHHHHHHHHHTTCCCEEESST-TTTGGGSCHHHHHHHHHHHHHHSCSSSCEEE-ECCCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcc-ccChhhCCHHHHHHHHHHHHHHhCCCCcEEE-eCCCcCHHHHHHHHHHHH
Confidence 46688888888999999999999999995 44 4678999999999988877777665 7764 44444 355
Q ss_pred HcCC-cEeecCCcc
Q psy14115 104 ALGA-DMFDCVFPT 116 (319)
Q Consensus 104 ~lGv-D~FD~~~Pt 116 (319)
++|. |-+=.+-|.
T Consensus 100 ~~Ga~davlv~~P~ 113 (311)
T 3h5d_A 100 EFGGFAAGLAIVPY 113 (311)
T ss_dssp HSCCCSEEEEECCC
T ss_pred hcCCCcEEEEcCCC
Confidence 6786 955444443
No 56
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=79.58 E-value=8.4 Score=35.84 Aligned_cols=80 Identities=24% Similarity=0.246 Sum_probs=52.0
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC--------CC------------HHHHHHHHHHhhcCCCCCCCeEec-
Q psy14115 33 VQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG--------EA------------KEDFWYSVLVSINCLPKDKPRYVM- 91 (319)
Q Consensus 33 VqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g--------e~------------~~e~~~ii~~~~~~LP~dkPr~l~- 91 (319)
|.+|..++ -++.+.+.+++++.+.|-.++ -. ..-.++.|..+.+.++ +.|....
T Consensus 189 v~~g~~~e----~a~~~~~~G~d~I~vs~~ggt~~~~~~~~r~~~~~~~~~~~~~g~~~~~~l~~v~~~~~-~ipvia~G 263 (332)
T 1vcf_A 189 VGHGLSRE----AALALRDLPLAAVDVAGAGGTSWARVEEWVRFGEVRHPELCEIGIPTARAILEVREVLP-HLPLVASG 263 (332)
T ss_dssp SSSCCCHH----HHHHHTTSCCSEEECCCBTSCCHHHHHHTC--------CCTTCSCBHHHHHHHHHHHCS-SSCEEEES
T ss_pred cCCCCCHH----HHHHHHHcCCCEEEeCCCCCCcchhHHHhhccccchhhhHhhccccHHHHHHHHHHhcC-CCeEEEEC
Confidence 44455544 366778889999999653211 00 0012445555555555 5778776
Q ss_pred CCCChHHHHHHHHcCCcEeecCCccc
Q psy14115 92 GIGFAVDLLICCALGADMFDCVFPTR 117 (319)
Q Consensus 92 Gvg~P~~Il~~V~lGvD~FD~~~Ptr 117 (319)
|+-+|.++..++++|+|.+=..-|..
T Consensus 264 GI~~~~d~~kal~~GAd~V~igr~~l 289 (332)
T 1vcf_A 264 GVYTGTDGAKALALGADLLAVARPLL 289 (332)
T ss_dssp SCCSHHHHHHHHHHTCSEEEECGGGH
T ss_pred CCCCHHHHHHHHHhCCChHhhhHHHH
Confidence 68999999999999999876554433
No 57
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=79.04 E-value=5.7 Score=36.04 Aligned_cols=83 Identities=18% Similarity=0.075 Sum_probs=57.4
Q ss_pred eeeeccCCCCHHHHHHHHHHHHh-CCCceEEeCC---------CCCCCCHHHHHHHHHHhhcCCCCCCCeEe---cCCCC
Q psy14115 29 IFPIVQGGLDEALRKDCAHQMVE-KDVNGFAVGG---------LSGGEAKEDFWYSVLVSINCLPKDKPRYV---MGIGF 95 (319)
Q Consensus 29 lfgiVqGG~~~dlR~~s~~~l~~-~~~~G~aIgG---------l~~ge~~~e~~~ii~~~~~~LP~dkPr~l---~Gvg~ 95 (319)
.+++-.+|.+++.-.++++.+.+ .+++++-|.- ...|.+.+...++++.+.+.+ +.|..+ .++.+
T Consensus 100 p~~v~l~~~~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~~~~~~~eii~~v~~~~--~~pv~vk~~~~~~~ 177 (311)
T 1ep3_A 100 PIIANVAGSEEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGTDPEVAAALVKACKAVS--KVPLYVKLSPNVTD 177 (311)
T ss_dssp CEEEEECCSSHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGGCHHHHHHHHHHHHHHC--SSCEEEEECSCSSC
T ss_pred cEEEEEcCCCHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCChHH
Confidence 44555556677777888888877 7888887742 222335566688888887765 467665 36667
Q ss_pred hHHH-HHHHHcCCcEeecC
Q psy14115 96 AVDL-LICCALGADMFDCV 113 (319)
Q Consensus 96 P~~I-l~~V~lGvD~FD~~ 113 (319)
+.++ ..+.+.|+|.++..
T Consensus 178 ~~~~a~~l~~~G~d~i~v~ 196 (311)
T 1ep3_A 178 IVPIAKAVEAAGADGLTMI 196 (311)
T ss_dssp SHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEe
Confidence 7774 56778999998875
No 58
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=78.74 E-value=5.9 Score=37.97 Aligned_cols=84 Identities=11% Similarity=-0.006 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEec---CCCC-hHHHHHHHHcCCcEeec
Q psy14115 37 LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVM---GIGF-AVDLLICCALGADMFDC 112 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~---Gvg~-P~~Il~~V~lGvD~FD~ 112 (319)
.+++.-.+.++.+.+. .+-+.|....+...+.++.+++..+.+.++++.|.-+. -.|. ..+.+.|+..|+|.||+
T Consensus 142 ~~~~~~~~~~~~~~~~-a~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ 220 (382)
T 2ztj_A 142 SEEQDLLAVYEAVAPY-VDRVGLADTVGVATPRQVYALVREVRRVVGPRVDIEFHGHNDTGCAIANAYEAIEAGATHVDT 220 (382)
T ss_dssp SCHHHHHHHHHHHGGG-CSEEEEEETTSCCCHHHHHHHHHHHHHHHTTTSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEE
T ss_pred CCHHHHHHHHHHHHHh-cCEEEecCCCCCCCHHHHHHHHHHHHHhcCCCCeEEEEeCCCccHHHHHHHHHHHhCCCEEEE
Confidence 5677778888999999 99999999888889999999999988875335555432 1343 45799999999999999
Q ss_pred CCccccCcC
Q psy14115 113 VFPTRTARF 121 (319)
Q Consensus 113 ~~Ptr~Ar~ 121 (319)
+.--.-.|.
T Consensus 221 tv~GlGera 229 (382)
T 2ztj_A 221 TILGIGERN 229 (382)
T ss_dssp BGGGCSSTT
T ss_pred ccccccccc
Confidence 865444433
No 59
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=78.56 E-value=10 Score=36.05 Aligned_cols=85 Identities=15% Similarity=0.036 Sum_probs=56.1
Q ss_pred ceeeeccCCCCHHHHHHHHHHHHhCCCceEE-----------------------eCCCCCCCCHHHHHHHHHHhhcCCCC
Q psy14115 28 NIFPIVQGGLDEALRKDCAHQMVEKDVNGFA-----------------------VGGLSGGEAKEDFWYSVLVSINCLPK 84 (319)
Q Consensus 28 ~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~a-----------------------IgGl~~ge~~~e~~~ii~~~~~~LP~ 84 (319)
.++.=+-.+.+.+.-.+.++.....+++++. .||+|+-..+..-+++|..+.+.++.
T Consensus 195 PV~vKi~p~~~~~~~a~~~~~aga~~i~~int~nt~g~~~~i~~~~~~~~~~~~~gGlSG~ai~p~a~~~v~~i~~~~~~ 274 (345)
T 3oix_A 195 PLGIKLPPYFDIVHFDQAAAIFNXYPLTFVNCINSIGNGLVIEDETVVIXPKNGFGGIGGDYVKPTALANVHAFYKRLNP 274 (345)
T ss_dssp CEEEEECCCCCHHHHHHHHHHHTTSCCSEEEECCCEEEEECEETTEESCSGGGGEEEEEEGGGHHHHHHHHHHHHTTSCT
T ss_pred CeEEEECCCCCHHHHHHHHHHhCCCceEEEEeecccccceeeccCccccccccccCCcCCccccHHHHHHHHHHHHHcCC
Confidence 4555555555555555555555555555432 12333211223347888899999988
Q ss_pred CCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 85 DKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 85 dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.|.... ||-+++|+..++..|+|.+-.
T Consensus 275 ~ipIIg~GGI~s~~da~~~l~aGAd~V~i 303 (345)
T 3oix_A 275 SIQIIGTGGVXTGRDAFEHILCGASMVQI 303 (345)
T ss_dssp TSEEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred CCcEEEECCCCChHHHHHHHHhCCCEEEE
Confidence 8998876 689999999999999997644
No 60
>2qf7_A Pyruvate carboxylase protein; multi-domain, multi-functional, biotin-dependent, ligase; HET: KCX COA AGS; 2.00A {Rhizobium etli} PDB: 3tw6_A* 3tw7_A*
Probab=78.37 E-value=5.6 Score=43.72 Aligned_cols=87 Identities=14% Similarity=0.079 Sum_probs=71.6
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC---CCC-hHHHHHHHHcCCcEeec
Q psy14115 37 LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG---IGF-AVDLLICCALGADMFDC 112 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G---vg~-P~~Il~~V~lGvD~FD~ 112 (319)
.+++--.+.++++.+.+.+-+.|....+...+.++.++|..+.+.+ +.|..+.. .|. ..+.+.|+..|+|.||+
T Consensus 706 ~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~--~~~i~~H~Hnd~GlAvAn~laAv~aGa~~vd~ 783 (1165)
T 2qf7_A 706 YDLKYYTNLAVELEKAGAHIIAVKDMAGLLKPAAAKVLFKALREAT--GLPIHFHTHDTSGIAAATVLAAVEAGVDAVDA 783 (1165)
T ss_dssp GCHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC--SSCEEEEECBTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeCccCCcCHHHHHHHHHHHHHhc--CCeEEEEECCCCCHHHHHHHHHHHhCCCEEEe
Confidence 5777788889999999999999999988899999999999998887 46665431 343 55799999999999999
Q ss_pred CCccccCcCCcce
Q psy14115 113 VFPTRTARFGSAL 125 (319)
Q Consensus 113 ~~Ptr~Ar~G~al 125 (319)
+.--.-.+-|.+=
T Consensus 784 ti~GlGe~~Gn~~ 796 (1165)
T 2qf7_A 784 AMDALSGNTSQPC 796 (1165)
T ss_dssp BCGGGCSBTSCCB
T ss_pred cccccCCCccchh
Confidence 9887777766653
No 61
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=78.10 E-value=5.7 Score=36.54 Aligned_cols=79 Identities=20% Similarity=0.236 Sum_probs=58.0
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeCCCCCCC----CHHHHHHHHHHhhcCCCCCCCeEecCCC--ChHHHH----HHHHc
Q psy14115 36 GLDEALRKDCAHQMVEKDVNGFAVGGLSGGE----AKEDFWYSVLVSINCLPKDKPRYVMGIG--FAVDLL----ICCAL 105 (319)
Q Consensus 36 G~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge----~~~e~~~ii~~~~~~LP~dkPr~l~Gvg--~P~~Il----~~V~l 105 (319)
.+|.+.-.+-++.+.+.+++|+.+.|. .|| +.+|..++++.+.+......|.++ |+| +..+.+ .+-++
T Consensus 19 ~iD~~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~Lt~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~~~ 96 (292)
T 3daq_A 19 KVNLEALKAHVNFLLENNAQAIIVNGT-TAESPTLTTDEKELILKTVIDLVDKRVPVIA-GTGTNDTEKSIQASIQAKAL 96 (292)
T ss_dssp EECHHHHHHHHHHHHHTTCCEEEESSG-GGTGGGSCHHHHHHHHHHHHHHHTTSSCEEE-ECCCSCHHHHHHHHHHHHHH
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEECcc-ccccccCCHHHHHHHHHHHHHHhCCCCcEEE-eCCcccHHHHHHHHHHHHHc
Confidence 466677778889999999999999984 444 678999999988887776667665 776 344443 45578
Q ss_pred CCcEeecCCcc
Q psy14115 106 GADMFDCVFPT 116 (319)
Q Consensus 106 GvD~FD~~~Pt 116 (319)
|+|-+=.+-|.
T Consensus 97 Gadavlv~~P~ 107 (292)
T 3daq_A 97 GADAIMLITPY 107 (292)
T ss_dssp TCSEEEEECCC
T ss_pred CCCEEEECCCC
Confidence 99966555443
No 62
>2pcq_A Putative dihydrodipicolinate synthase; lyase, lysine biosynthesis, dihydrodipicoliante, S genomics, NPPSFA; 2.10A {Thermus thermophilus}
Probab=77.65 E-value=4.7 Score=36.94 Aligned_cols=76 Identities=24% Similarity=0.189 Sum_probs=55.9
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC----CCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG----EAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g----e~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+. ++|+.+.|. .| .+.+|..++++.+.+ ..|.+ .|+|. ..+.+ .+-
T Consensus 13 dg~iD~~~l~~lv~~li~~-v~gl~v~Gt-tGE~~~Ls~~Er~~v~~~~~~----rvpvi-aGvg~~~t~~ai~la~~A~ 85 (283)
T 2pcq_A 13 EGRLDEEAFRELAQALEPL-VDGLLVYGS-NGEGVHLTPEERARGLRALRP----RKPFL-VGLMEETLPQAEGALLEAK 85 (283)
T ss_dssp TCCBCHHHHHHHHHHHGGG-SSCCEETCT-TTTGGGSCHHHHHHHHHTCCC----SSCCE-EEECCSSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHhh-CCEEEECCc-CcCchhcCHHHHHHHHHHHHh----CCcEE-EeCCCCCHHHHHHHHHHHH
Confidence 4778989888899999999 999999885 34 467899999998887 45544 57764 33333 355
Q ss_pred HcCCcEeecCCcc
Q psy14115 104 ALGADMFDCVFPT 116 (319)
Q Consensus 104 ~lGvD~FD~~~Pt 116 (319)
++|+|-+=.+-|.
T Consensus 86 ~~Gadavlv~~P~ 98 (283)
T 2pcq_A 86 AAGAMALLATPPR 98 (283)
T ss_dssp HHTCSEEEECCCC
T ss_pred hcCCCEEEecCCc
Confidence 7899976555554
No 63
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=76.97 E-value=1.8 Score=40.12 Aligned_cols=81 Identities=17% Similarity=0.254 Sum_probs=61.3
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC----CCHHHHHHHHHHhhcCCCCCCCeEecCCC--ChHHHH----HHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG----EAKEDFWYSVLVSINCLPKDKPRYVMGIG--FAVDLL----ICC 103 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g----e~~~e~~~ii~~~~~~LP~dkPr~l~Gvg--~P~~Il----~~V 103 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|. .| .+.+|..++++.+.+......|.++ |+| +..+.+ .+-
T Consensus 19 dg~iD~~~l~~lv~~li~~Gv~gl~v~Gt-tGE~~~Ls~~Er~~v~~~~~~~~~grvpvia-Gvg~~~t~~ai~la~~a~ 96 (300)
T 3eb2_A 19 EGRVRADVMGRLCDDLIQAGVHGLTPLGS-TGEFAYLGTAQREAVVRATIEAAQRRVPVVA-GVASTSVADAVAQAKLYE 96 (300)
T ss_dssp TSCBCHHHHHHHHHHHHHTTCSCBBTTSG-GGTGGGCCHHHHHHHHHHHHHHHTTSSCBEE-EEEESSHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEECcc-ccCccccCHHHHHHHHHHHHHHhCCCCcEEE-eCCCCCHHHHHHHHHHHH
Confidence 46788888888999999999999999884 44 4788999999998888776677655 776 344433 455
Q ss_pred HcCCcEeecCCcc
Q psy14115 104 ALGADMFDCVFPT 116 (319)
Q Consensus 104 ~lGvD~FD~~~Pt 116 (319)
++|+|-+=.+-|.
T Consensus 97 ~~Gadavlv~~P~ 109 (300)
T 3eb2_A 97 KLGADGILAILEA 109 (300)
T ss_dssp HHTCSEEEEEECC
T ss_pred HcCCCEEEEcCCC
Confidence 7999966555444
No 64
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=76.51 E-value=23 Score=32.18 Aligned_cols=83 Identities=16% Similarity=0.011 Sum_probs=57.7
Q ss_pred ceeeeccCCCCHHHHHHHHHHHHhCCCc-eEEeCCC--------CCCCCHHHHHHHHHHhhcCCCCCCCeEe-cCCC-Ch
Q psy14115 28 NIFPIVQGGLDEALRKDCAHQMVEKDVN-GFAVGGL--------SGGEAKEDFWYSVLVSINCLPKDKPRYV-MGIG-FA 96 (319)
Q Consensus 28 ~lfgiVqGG~~~dlR~~s~~~l~~~~~~-G~aIgGl--------~~ge~~~e~~~ii~~~~~~LP~dkPr~l-~Gvg-~P 96 (319)
.+++-+ +|..++.-.++++.+.+.+++ ++.|.-. ..|.+.+...++++.+.+.. +.|..+ +..+ ++
T Consensus 95 p~~~~i-~g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~~g~~~~g~~~e~~~~iv~~vr~~~--~~Pv~vKi~~~~~~ 171 (311)
T 1jub_A 95 PIFFSI-AGMSAAENIAMLKKIQESDFSGITELNLSCPNVPGEPQLAYDFEATEKLLKEVFTFF--TKPLGVKLPPYFDL 171 (311)
T ss_dssp CCEEEE-CCSSHHHHHHHHHHHHHSCCCSEEEEESCCCCSSSCCCGGGCHHHHHHHHHHHTTTC--CSCEEEEECCCCSH
T ss_pred CEEEEc-CCCCHHHHHHHHHHHHhcCCCeEEEEeccCCCCCCcccccCCHHHHHHHHHHHHHhc--CCCEEEEECCCCCH
Confidence 344444 467888888999999999999 8887422 22346777889999998876 578876 2322 55
Q ss_pred HHH----HHHHHcCCcEeecC
Q psy14115 97 VDL----LICCALGADMFDCV 113 (319)
Q Consensus 97 ~~I----l~~V~lGvD~FD~~ 113 (319)
.++ ..+.+.|+|.+...
T Consensus 172 ~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 172 VHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp HHHHHHHHHHTTSCCCEEEEC
T ss_pred HHHHHHHHHHHHcCCcEEEec
Confidence 554 34556799988764
No 65
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=75.60 E-value=6 Score=35.77 Aligned_cols=82 Identities=12% Similarity=0.127 Sum_probs=53.9
Q ss_pred CceeeeccCCCC-HHHHHHHHHHHHhCCCceEEeCCCCC-------------------CCCHHHHHHHHHHhhcCCCCCC
Q psy14115 27 QNIFPIVQGGLD-EALRKDCAHQMVEKDVNGFAVGGLSG-------------------GEAKEDFWYSVLVSINCLPKDK 86 (319)
Q Consensus 27 q~lfgiVqGG~~-~dlR~~s~~~l~~~~~~G~aIgGl~~-------------------ge~~~e~~~ii~~~~~~LP~dk 86 (319)
..+.+.|..|.. .+.-.+-++.|.+.+++.+-+|..-. |.+.+...++++.+++..+ +.
T Consensus 17 ~~~i~~i~~gdp~~~~~~~~~~~l~~~GaD~ieig~P~sdp~~DG~~i~~a~~~al~~G~~~~~~~~~v~~ir~~~~-~~ 95 (268)
T 1qop_A 17 GAFVPFVTLGDPGIEQSLKIIDTLIDAGADALELGVPFSDPLADGPTIQNANLRAFAAGVTPAQCFEMLAIIREKHP-TI 95 (268)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHCS-SS
T ss_pred ceEEEEeeCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCccCCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhcCC-CC
Confidence 456777766543 35556678888889999999987421 1122334567777776522 47
Q ss_pred CeEecCCCCh-------HHHHHHHHcCCcE
Q psy14115 87 PRYVMGIGFA-------VDLLICCALGADM 109 (319)
Q Consensus 87 Pr~l~Gvg~P-------~~Il~~V~lGvD~ 109 (319)
|.++|+-..| ..+-.+.+.|+|.
T Consensus 96 Pv~lm~y~n~v~~~g~~~~~~~~~~aGadg 125 (268)
T 1qop_A 96 PIGLLMYANLVFNNGIDAFYARCEQVGVDS 125 (268)
T ss_dssp CEEEEECHHHHHTTCHHHHHHHHHHHTCCE
T ss_pred CEEEEEcccHHHHhhHHHHHHHHHHcCCCE
Confidence 8888864444 5567788999993
No 66
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=75.58 E-value=5.9 Score=37.58 Aligned_cols=80 Identities=13% Similarity=0.053 Sum_probs=55.6
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeCCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCCCC--hHHHH----HHHH
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVGGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGIGF--AVDLL----ICCA 104 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~--P~~Il----~~V~ 104 (319)
.|.+|.+.-.+-++.+.+.+++|+.+.|..+ -.+.+|..++++.. .....|.+ .|+|. ..+.+ .+-+
T Consensus 41 dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~---~~grvpVi-aGvg~~st~eai~la~~A~~ 116 (344)
T 2hmc_A 41 DRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERL---VKAGIPVI-VGTGAVNTASAVAHAVHAQK 116 (344)
T ss_dssp TSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHH---HHTTCCEE-EECCCSSHHHHHHHHHHHHH
T ss_pred CCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHH---hCCCCcEE-EecCCCCHHHHHHHHHHHHh
Confidence 4678888888899999999999999988522 24678888888872 23345544 58864 33433 3556
Q ss_pred cCCcEeecCCccc
Q psy14115 105 LGADMFDCVFPTR 117 (319)
Q Consensus 105 lGvD~FD~~~Ptr 117 (319)
+|+|-+=.+-|..
T Consensus 117 ~Gadavlv~~P~y 129 (344)
T 2hmc_A 117 VGAKGLMVIPRVL 129 (344)
T ss_dssp HTCSEEEECCCCS
T ss_pred cCCCEEEECCCcc
Confidence 8999776655543
No 67
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=75.03 E-value=6.2 Score=37.79 Aligned_cols=66 Identities=14% Similarity=0.109 Sum_probs=51.6
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeec
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.++.+.+.+++.+.|.. +.| +++..+++|+.+.+.+| +.|..+-++.++++...+.+.|+|.++.
T Consensus 156 ~~a~~~~~~G~d~i~i~~-~~g-~~~~~~e~i~~ir~~~~-~~pviv~~v~~~~~a~~a~~~Gad~I~v 221 (404)
T 1eep_A 156 ERVEELVKAHVDILVIDS-AHG-HSTRIIELIKKIKTKYP-NLDLIAGNIVTKEAALDLISVGADCLKV 221 (404)
T ss_dssp HHHHHHHHTTCSEEEECC-SCC-SSHHHHHHHHHHHHHCT-TCEEEEEEECSHHHHHHHHTTTCSEEEE
T ss_pred HHHHHHHHCCCCEEEEeC-CCC-ChHHHHHHHHHHHHHCC-CCeEEEcCCCcHHHHHHHHhcCCCEEEE
Confidence 345667778999998832 223 34678889988888887 6787765778999999999999999987
No 68
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=74.06 E-value=9.6 Score=35.83 Aligned_cols=68 Identities=13% Similarity=0.115 Sum_probs=53.2
Q ss_pred hCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC---CCC-hHHHHHHHHcCCcEeecCCccccCc
Q psy14115 51 EKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG---IGF-AVDLLICCALGADMFDCVFPTRTAR 120 (319)
Q Consensus 51 ~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G---vg~-P~~Il~~V~lGvD~FD~~~Ptr~Ar 120 (319)
+.+++-+.|.+..+...+++..+++..+.+.+| .|..+.. .|. ..+.+.++..|+|.||++.--.-.+
T Consensus 154 ~~G~~~i~l~Dt~G~~~P~~~~~lv~~l~~~~~--~~i~~H~Hn~~G~a~an~laA~~aGa~~vd~si~GlG~~ 225 (320)
T 3dxi_A 154 DKIADLFCMVDSFGGITPKEVKNLLKEVRKYTH--VPVGFHGHDNLQLGLINSITAIDDGIDFIDATITGMGRG 225 (320)
T ss_dssp TTTCSEEEEECTTSCCCHHHHHHHHHHHHHHCC--SCEEEECBCTTSCHHHHHHHHHHTTCSEEEEBGGGCSST
T ss_pred hCCCCEEEECcccCCCCHHHHHHHHHHHHHhCC--CeEEEEeCCCCccHHHHHHHHHHhCCCEEEEeccccCCc
Confidence 468889999998888899999999999998886 5655431 332 4478899999999999987555444
No 69
>3hbl_A Pyruvate carboxylase; TIM barrel, ligase; HET: BTI ADP; 2.71A {Staphylococcus aureus subsp} PDB: 3bg5_A* 3ho8_A* 4hnu_A* 4hnt_A* 4hnv_A* 3hb9_A*
Probab=73.99 E-value=11 Score=41.52 Aligned_cols=86 Identities=10% Similarity=0.074 Sum_probs=69.8
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC---CCC-hHHHHHHHHcCCcEeec
Q psy14115 37 LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG---IGF-AVDLLICCALGADMFDC 112 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G---vg~-P~~Il~~V~lGvD~FD~ 112 (319)
.+.+--.+.++++.+.+.+-+.|....+...+.+..++|..+.+.+ +.|..+.. .|. ..+.+.|+..|+|.||+
T Consensus 689 ~~~~~~~~~a~~~~~~Ga~~i~l~Dt~G~~~P~~~~~lv~~l~~~~--~~~i~~H~Hnt~G~a~An~laA~~aGa~~vD~ 766 (1150)
T 3hbl_A 689 YTLEYYVKLAKELEREGFHILAIKDMAGLLKPKAAYELIGELKSAV--DLPIHLHTHDTSGNGLLTYKQAIDAGVDIIDT 766 (1150)
T ss_dssp SSHHHHHHHHHHHHHTTCSEEEEEETTCCCCHHHHHHHHHHHHHHC--CSCEEEEECBTTSCHHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCeeeEcCccCCCCHHHHHHHHHHHHHhc--CCeEEEEeCCCCcHHHHHHHHHHHhCCCEEEE
Confidence 4566677889999999999999999988889999999999988876 56765531 343 55799999999999999
Q ss_pred CCccccCcCCcc
Q psy14115 113 VFPTRTARFGSA 124 (319)
Q Consensus 113 ~~Ptr~Ar~G~a 124 (319)
+.--.-.+-|.+
T Consensus 767 ai~GlG~~~gn~ 778 (1150)
T 3hbl_A 767 AVASMSGLTSQP 778 (1150)
T ss_dssp BCGGGCSBTSCC
T ss_pred eccccCCCCCCc
Confidence 987776666654
No 70
>3ivs_A Homocitrate synthase, mitochondrial; TIM barrel, metalloprotein, transferase, claisen condensatio acid biosynthesis; 2.24A {Schizosaccharomyces pombe} PDB: 3ivt_A* 3ivu_A* 3mi3_A*
Probab=73.86 E-value=16 Score=35.75 Aligned_cols=85 Identities=12% Similarity=0.024 Sum_probs=62.8
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC-CCC-hHHHHHHHHcCCcEeecCC
Q psy14115 37 LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG-IGF-AVDLLICCALGADMFDCVF 114 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G-vg~-P~~Il~~V~lGvD~FD~~~ 114 (319)
.+++--.+.++.+.+.+.+-+.|....+...+.++.+++..+.+.++...-.|... .|. -.+.+.++..|+|.||++.
T Consensus 177 ~d~~~~~~v~~~~~~~Ga~~i~l~DTvG~~~P~~v~~lv~~l~~~~~~~i~~H~Hnd~GlAvAN~laAv~aGa~~vd~ti 256 (423)
T 3ivs_A 177 SDLVDLLSLYKAVDKIGVNRVGIADTVGCATPRQVYDLIRTLRGVVSCDIECHFHNDTGMAIANAYCALEAGATHIDTSI 256 (423)
T ss_dssp SCHHHHHHHHHHHHHHCCSEEEEEETTSCCCHHHHHHHHHHHHHHCSSEEEEEEBCTTSCHHHHHHHHHHTTCCEEEEBG
T ss_pred CCHHHHHHHHHHHHHhCCCccccCCccCcCCHHHHHHHHHHHHhhcCCeEEEEECCCCchHHHHHHHHHHhCCCEEEEec
Confidence 46666677788888899999999998888899999999998887664222223332 343 4579999999999999986
Q ss_pred ccccCcC
Q psy14115 115 PTRTARF 121 (319)
Q Consensus 115 Ptr~Ar~ 121 (319)
--.-.|-
T Consensus 257 ~GlGERa 263 (423)
T 3ivs_A 257 LGIGERN 263 (423)
T ss_dssp GGCSSTT
T ss_pred ccccCcc
Confidence 4444333
No 71
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=73.66 E-value=9.9 Score=37.18 Aligned_cols=84 Identities=20% Similarity=0.250 Sum_probs=61.7
Q ss_pred eeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCC-------------CCC----HHHHHHHHHHhhcCCCCCCCeEec
Q psy14115 29 IFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSG-------------GEA----KEDFWYSVLVSINCLPKDKPRYVM 91 (319)
Q Consensus 29 lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~-------------ge~----~~e~~~ii~~~~~~LP~dkPr~l~ 91 (319)
++.=+-.+.+.+.-.+-++.+.+.+++|+.+.+-.. |.+ +..-.++|..+.+.++.+.|....
T Consensus 272 V~VKi~pd~~~~~i~~iA~~a~~aGaDgIiv~Ntt~~r~dl~~~~~~~GGlSG~a~~p~al~~I~~v~~~v~~~iPIIg~ 351 (415)
T 3i65_A 272 VFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS 351 (415)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHHTCSEEEECCCBSCCCCCGGGTTCCSEEEEGGGHHHHHHHHHHHHHHTTTCSCEEEC
T ss_pred EEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeCCCcccccccccccccCCcCCccchHHHHHHHHHHHHHhCCCCCEEEE
Confidence 566666677765556677777788999999876421 111 122357788888888778899877
Q ss_pred -CCCChHHHHHHHHcCCcEeec
Q psy14115 92 -GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 92 -Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
||.+++|+..++..|+|.+-.
T Consensus 352 GGI~s~eDa~e~l~aGAd~VqI 373 (415)
T 3i65_A 352 GGIFSGLDALEKIEAGASVCQL 373 (415)
T ss_dssp SSCCSHHHHHHHHHHTEEEEEE
T ss_pred CCCCCHHHHHHHHHcCCCEEEE
Confidence 689999999999999998654
No 72
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=73.39 E-value=14 Score=32.94 Aligned_cols=82 Identities=11% Similarity=0.046 Sum_probs=54.7
Q ss_pred ceeeec-cCCCCHHHHHHHHHHHHhCCCceEEeCCC-------------------CCCCCHHHHHHHHHHhhcCCCCCCC
Q psy14115 28 NIFPIV-QGGLDEALRKDCAHQMVEKDVNGFAVGGL-------------------SGGEAKEDFWYSVLVSINCLPKDKP 87 (319)
Q Consensus 28 ~lfgiV-qGG~~~dlR~~s~~~l~~~~~~G~aIgGl-------------------~~ge~~~e~~~ii~~~~~~LP~dkP 87 (319)
.+.+.+ -|..+.+.-.+.++.+.+.+++.+-+|.. ..|.+.++..++++.+++. .+.|
T Consensus 19 ~~~~~i~~g~~~~~~~~~~~~~l~~~Gad~ielg~p~~dp~~dg~~i~~a~~~al~~g~~~~~~~~~i~~ir~~--~~~P 96 (262)
T 1rd5_A 19 AFIPYITAGDPDLATTAEALRLLDGCGADVIELGVPCSDPYIDGPIIQASVARALASGTTMDAVLEMLREVTPE--LSCP 96 (262)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTSCHHHHHHHHHHHTTTCCHHHHHHHHHHHGGG--CSSC
T ss_pred eEEEEeeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCcccCCHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc--CCCC
Confidence 344444 34344455566788888889999999753 2345667778888888876 3688
Q ss_pred eEecCCCChHH---HHHHHHcCCcEee
Q psy14115 88 RYVMGIGFAVD---LLICCALGADMFD 111 (319)
Q Consensus 88 r~l~Gvg~P~~---Il~~V~lGvD~FD 111 (319)
.++|+.-.|.. +-.+.+.|+|.+-
T Consensus 97 v~~m~~~~~~~~~~~~~a~~aGadgv~ 123 (262)
T 1rd5_A 97 VVLLSYYKPIMFRSLAKMKEAGVHGLI 123 (262)
T ss_dssp EEEECCSHHHHSCCTHHHHHTTCCEEE
T ss_pred EEEEecCcHHHHHHHHHHHHcCCCEEE
Confidence 88887555532 3348889998543
No 73
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=72.90 E-value=7.6 Score=38.06 Aligned_cols=66 Identities=14% Similarity=0.134 Sum_probs=52.9
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeec
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.++.+.+.+++.+.+.... | .....++.++.+.+..| +.|..+-++.++++...+.+.|+|.++.
T Consensus 240 ~~a~~l~~aGvd~v~i~~~~-G-~~~~~~e~i~~i~~~~p-~~pvi~g~~~t~e~a~~l~~~G~d~I~v 305 (494)
T 1vrd_A 240 ERVEKLVKAGVDVIVIDTAH-G-HSRRVIETLEMIKADYP-DLPVVAGNVATPEGTEALIKAGADAVKV 305 (494)
T ss_dssp HHHHHHHHTTCSEEEECCSC-C-SSHHHHHHHHHHHHHCT-TSCEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhCCCEEEEEecC-C-chHHHHHHHHHHHHHCC-CceEEeCCcCCHHHHHHHHHcCCCEEEE
Confidence 45777888899999986532 3 34567788888888887 5887776678999999999999999986
No 74
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=72.49 E-value=5.4 Score=38.12 Aligned_cols=67 Identities=15% Similarity=0.103 Sum_probs=46.5
Q ss_pred HHHHHHhCCCceEEeCCCC-----CCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecCC
Q psy14115 45 CAHQMVEKDVNGFAVGGLS-----GGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCVF 114 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~-----~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~~ 114 (319)
-++.+.+.+++++.++|-+ .|.. .++.+..+.+.++.+.|.+.- |+-++.|++.++++|+|.+=.--
T Consensus 242 ~a~~a~~~Gad~I~vs~~ggr~~~~g~~---~~~~l~~v~~~v~~~ipVia~GGI~~g~D~~kalalGAd~V~iGr 314 (368)
T 2nli_A 242 DADMAIKRGASGIWVSNHGARQLYEAPG---SFDTLPAIAERVNKRVPIVFDSGVRRGEHVAKALASGADVVALGR 314 (368)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSCSSCCC---HHHHHHHHHHHHTTSSCEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHcCCCEEEEcCCCcCCCCCCCC---hHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEECH
Confidence 3566667899999996632 1222 234444555555666788876 68999999999999999875543
No 75
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=71.62 E-value=7 Score=38.18 Aligned_cols=66 Identities=12% Similarity=0.114 Sum_probs=52.7
Q ss_pred HHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecC
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
-++.+.+.+++.+.+++. .| ..+..++.+..+.+.+| +.|...=+++++.....++.+|+|.++..
T Consensus 237 ~a~~l~~~G~d~ivi~~a-~g-~~~~~~~~i~~l~~~~p-~~pvi~G~v~t~~~a~~~~~~Gad~I~vg 302 (491)
T 1zfj_A 237 RAEALFEAGADAIVIDTA-HG-HSAGVLRKIAEIRAHFP-NRTLIAGNIATAEGARALYDAGVDVVKVG 302 (491)
T ss_dssp HHHHHHHHTCSEEEECCS-CT-TCHHHHHHHHHHHHHCS-SSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHcCCCeEEEeee-cC-cchhHHHHHHHHHHHCC-CCcEeCCCccCHHHHHHHHHcCCCEEEEC
Confidence 366677789999999984 33 45567888888888886 77877656899999999999999999754
No 76
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=69.48 E-value=8.9 Score=34.71 Aligned_cols=66 Identities=18% Similarity=0.122 Sum_probs=44.8
Q ss_pred HHHHHHhCCCceEEeCCCCC------------------CCC-HH---HHHHHHHHhhcCCCCCCCeEec-CCCChHHHHH
Q psy14115 45 CAHQMVEKDVNGFAVGGLSG------------------GEA-KE---DFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLI 101 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~------------------ge~-~~---e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~ 101 (319)
.++.+.+.+++++.+.|... |.+ +. ...+.+..+.+.+ +.|.... |+.+|+++..
T Consensus 181 ~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~--~ipvia~GGI~~~~d~~~ 258 (311)
T 1ep3_A 181 IAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDV--DIPIIGMGGVANAQDVLE 258 (311)
T ss_dssp HHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTC--SSCEEECSSCCSHHHHHH
T ss_pred HHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHH
Confidence 45667778999999854210 001 11 1246666666655 6788875 5899999999
Q ss_pred HHHcCCcEeec
Q psy14115 102 CCALGADMFDC 112 (319)
Q Consensus 102 ~V~lGvD~FD~ 112 (319)
+++.|+|.+-.
T Consensus 259 ~l~~GAd~V~v 269 (311)
T 1ep3_A 259 MYMAGASAVAV 269 (311)
T ss_dssp HHHHTCSEEEE
T ss_pred HHHcCCCEEEE
Confidence 99999998643
No 77
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=68.65 E-value=6.5 Score=37.90 Aligned_cols=68 Identities=21% Similarity=0.174 Sum_probs=46.6
Q ss_pred HHHHHHHhCCCceEEeCCCCC-----CCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecCC
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSG-----GEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCVF 114 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~-----ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~~ 114 (319)
+-++.+.+.+++++.++|-.+ |.+ .++.+..+.+.++.+.|.+.- |+-++.|++.++++|+|.+=.--
T Consensus 264 e~A~~a~~aGad~I~vs~~ggr~~~~g~~---~~~~l~~v~~av~~~ipVia~GGI~~g~Dv~kalalGAd~V~iGr 337 (392)
T 2nzl_A 264 DDAREAVKHGLNGILVSNHGARQLDGVPA---TIDVLPEIVEAVEGKVEVFLDGGVRKGTDVLKALALGAKAVFVGR 337 (392)
T ss_dssp HHHHHHHHTTCCEEEECCGGGTSSTTCCC---HHHHHHHHHHHHTTSSEEEECSSCCSHHHHHHHHHTTCSEEEECH
T ss_pred HHHHHHHHcCCCEEEeCCCCCCcCCCCcC---hHHHHHHHHHHcCCCCEEEEECCCCCHHHHHHHHHhCCCeeEECH
Confidence 346777788999999966321 222 234444444445556778876 68999999999999999765443
No 78
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=67.98 E-value=32 Score=31.98 Aligned_cols=66 Identities=20% Similarity=0.176 Sum_probs=43.4
Q ss_pred HHHHHHHhCCCceEEeCCCC---------------------CCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHH
Q psy14115 44 DCAHQMVEKDVNGFAVGGLS---------------------GGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLI 101 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~---------------------~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~ 101 (319)
+-++.+.+.+++|+.+.+-+ .|.+. ++.|..+.+.+ .+.|...- |+.+|.|+..
T Consensus 193 ~~a~~a~~~Gad~I~v~~~ggt~~~~~e~~r~~~~~~~~~~~g~~~---~~~l~~v~~~~-~~ipvia~GGI~~~~d~~k 268 (349)
T 1p0k_A 193 ASAGKLYEAGAAAVDIGGYGGTNFSKIENLRRQRQISFFNSWGIST---AASLAEIRSEF-PASTMIASGGLQDALDVAK 268 (349)
T ss_dssp HHHHHHHHHTCSEEEEEC---------------CCGGGGTTCSCCH---HHHHHHHHHHC-TTSEEEEESSCCSHHHHHH
T ss_pred HHHHHHHHcCCCEEEEcCCCCcchhhHHHhhcccchhhhhccCccH---HHHHHHHHHhc-CCCeEEEECCCCCHHHHHH
Confidence 34667777899999985421 11221 23444444444 36777764 7899999999
Q ss_pred HHHcCCcEeecC
Q psy14115 102 CCALGADMFDCV 113 (319)
Q Consensus 102 ~V~lGvD~FD~~ 113 (319)
++++|+|.+=.-
T Consensus 269 ~l~~GAd~V~iG 280 (349)
T 1p0k_A 269 AIALGASCTGMA 280 (349)
T ss_dssp HHHTTCSEEEEC
T ss_pred HHHcCCCEEEEc
Confidence 999999977543
No 79
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=67.62 E-value=13 Score=34.99 Aligned_cols=79 Identities=18% Similarity=0.169 Sum_probs=56.0
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeC---CCCC-----CCCHHHHHHHHHHhhcCCCCCCCeEec---CCCChHHHHHHHHc
Q psy14115 37 LDEALRKDCAHQMVEKDVNGFAVG---GLSG-----GEAKEDFWYSVLVSINCLPKDKPRYVM---GIGFAVDLLICCAL 105 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~~~~G~aIg---Gl~~-----ge~~~e~~~ii~~~~~~LP~dkPr~l~---Gvg~P~~Il~~V~l 105 (319)
...+...+-++.|.+.+++-.-+| |+.. |.....-++.+..+++.+| +.|..+| |.+.+.++-.+.+.
T Consensus 27 ~~~e~k~~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~-~~~i~~l~~p~~~~~~~i~~a~~a 105 (345)
T 1nvm_A 27 YTLDDVRAIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEIS-HAQIATLLLPGIGSVHDLKNAYQA 105 (345)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCS-SSEEEEEECBTTBCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCC-CCEEEEEecCCcccHHHHHHHHhC
Confidence 667788888999999999999887 3321 2222334556666666665 5555566 77889999999999
Q ss_pred CCcEeecCCcc
Q psy14115 106 GADMFDCVFPT 116 (319)
Q Consensus 106 GvD~FD~~~Pt 116 (319)
|+|.+-...|.
T Consensus 106 Gvd~v~I~~~~ 116 (345)
T 1nvm_A 106 GARVVRVATHC 116 (345)
T ss_dssp TCCEEEEEEET
T ss_pred CcCEEEEEEec
Confidence 99987554444
No 80
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=67.29 E-value=16 Score=34.67 Aligned_cols=70 Identities=16% Similarity=0.140 Sum_probs=48.6
Q ss_pred HHHHHHHhCCCceEEeCCCCCC--CCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecC
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGG--EAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~g--e~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
+-++.+.+.+++++.+++-.+. ......++.+..+.+.+|.+.|.+.. |+.++.|+..++++|+|.+-.-
T Consensus 237 e~a~~a~~~Gad~I~vs~~ggr~~~~~~~~~~~l~~v~~~~~~~ipvia~GGI~~~~D~~k~l~~GAdaV~iG 309 (370)
T 1gox_A 237 EDARLAVQHGAAGIIVSNHGARQLDYVPATIMALEEVVKAAQGRIPVFLDGGVRRGTDVFKALALGAAGVFIG 309 (370)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSTTCCCHHHHHHHHHHHTTTSSCEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEECCCCCccCCCcccHHHHHHHHHHHhCCCCEEEEECCCCCHHHHHHHHHcCCCEEeec
Confidence 3456677889999999662210 00012345556666667777888875 6899999999999999977554
No 81
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=66.91 E-value=23 Score=32.16 Aligned_cols=83 Identities=18% Similarity=0.029 Sum_probs=55.3
Q ss_pred eeeeccCCCCHHHHHHHHHHHHhCC-CceEEeCCCCC------------------------CCC-HHHHHHHHHHhhcCC
Q psy14115 29 IFPIVQGGLDEALRKDCAHQMVEKD-VNGFAVGGLSG------------------------GEA-KEDFWYSVLVSINCL 82 (319)
Q Consensus 29 lfgiVqGG~~~dlR~~s~~~l~~~~-~~G~aIgGl~~------------------------ge~-~~e~~~ii~~~~~~L 82 (319)
++.=+-++.+.+.-.+.++.+.+.+ ++++.+.+... |.. ...-++.+..+.+.+
T Consensus 163 v~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~~~~~~~~~i~~~~~~~~~~~~~~~gG~sg~~~~p~~~~~i~~v~~~~ 242 (314)
T 2e6f_A 163 FGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCVNSVGNGLVIDAESESVVIKPKQGFGGLGGKYILPTALANVNAFYRRC 242 (314)
T ss_dssp EEEEECCCCCHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCCGGGGEEEEESGGGHHHHHHHHHHHHHHC
T ss_pred EEEEECCCCCHHHHHHHHHHHHhcCCceEEEEeCCCCccccccCCCCCcccccCcCCCccCcccccHHHHHHHHHHHHhc
Confidence 4433445566555555577778889 99998766320 100 112356777777766
Q ss_pred CCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 83 PKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 83 P~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
++.|.... |+.+|+++..+++.|+|.+-.
T Consensus 243 -~~ipvi~~GGI~~~~da~~~l~~GAd~V~i 272 (314)
T 2e6f_A 243 -PDKLVFGCGGVYSGEDAFLHILAGASMVQV 272 (314)
T ss_dssp -TTSEEEEESSCCSHHHHHHHHHHTCSSEEE
T ss_pred -CCCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 46788765 689999999999999997643
No 82
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=65.97 E-value=31 Score=33.88 Aligned_cols=84 Identities=20% Similarity=0.250 Sum_probs=60.4
Q ss_pred eeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCC-------------CCC----HHHHHHHHHHhhcCCCCCCCeEec
Q psy14115 29 IFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSG-------------GEA----KEDFWYSVLVSINCLPKDKPRYVM 91 (319)
Q Consensus 29 lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~-------------ge~----~~e~~~ii~~~~~~LP~dkPr~l~ 91 (319)
++.=+-.+.+.+.-.+-++.+.+.+++|+.+.+-.. |.+ ...-++++..+.+.++.+.|....
T Consensus 300 V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~ntt~~~~d~~~~~~~~GGlSG~~~~~~sl~~i~~v~~~v~~~iPVIg~ 379 (443)
T 1tv5_A 300 VFVKLAPDLNQEQKKEIADVLLETNIDGMIISNTTTQINDIKSFENKKGGVSGAKLKDISTKFICEMYNYTNKQIPIIAS 379 (443)
T ss_dssp EEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCCBSCCCCCGGGTTCCSEEEEHHHHHHHHHHHHHHHHHTTTCSCEEEE
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECCCcccccccccccccCCcCCCcchHHHHHHHHHHHHHcCCCCcEEEE
Confidence 455566666655455567777888999998877422 111 112357788888888778898876
Q ss_pred -CCCChHHHHHHHHcCCcEeec
Q psy14115 92 -GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 92 -Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
||-+|+++..++..|+|++-.
T Consensus 380 GGI~s~~DA~e~l~aGAd~Vqi 401 (443)
T 1tv5_A 380 GGIFSGLDALEKIEAGASVCQL 401 (443)
T ss_dssp SSCCSHHHHHHHHHTTEEEEEE
T ss_pred CCCCCHHHHHHHHHcCCCEEEE
Confidence 689999999999999998754
No 83
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=65.85 E-value=15 Score=34.18 Aligned_cols=71 Identities=17% Similarity=0.098 Sum_probs=47.7
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCC---HHH--------HHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEee
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGEA---KED--------FWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFD 111 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge~---~~e--------~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD 111 (319)
+-++.+.+.+++++.+++-. |-. ... -++.+..+.+.+ +.|.+.- |+.++.|++.++++|+|.+=
T Consensus 161 e~A~~a~~aGad~Ivvs~hg-G~~~~~~~~~~~g~~g~~~~~l~~v~~~~--~ipVIa~GGI~~g~Dv~kalalGAdaV~ 237 (336)
T 1ypf_A 161 EAVRELENAGADATKVGIGP-GKVCITKIKTGFGTGGWQLAALRWCAKAA--SKPIIADGGIRTNGDVAKSIRFGATMVM 237 (336)
T ss_dssp HHHHHHHHHTCSEEEECSSC-STTCHHHHHHSCSSTTCHHHHHHHHHHTC--SSCEEEESCCCSTHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEecCC-CceeecccccCcCCchhHHHHHHHHHHHc--CCcEEEeCCCCCHHHHHHHHHcCCCEEE
Confidence 45667778899999996532 211 111 245555555555 5777765 79999999999999999775
Q ss_pred cCCccc
Q psy14115 112 CVFPTR 117 (319)
Q Consensus 112 ~~~Ptr 117 (319)
.--|..
T Consensus 238 iGr~~l 243 (336)
T 1ypf_A 238 IGSLFA 243 (336)
T ss_dssp ESGGGT
T ss_pred eChhhh
Confidence 544433
No 84
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=65.11 E-value=26 Score=33.49 Aligned_cols=69 Identities=17% Similarity=0.207 Sum_probs=43.1
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCCHH--------------H----HHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHH
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGEAKE--------------D----FWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCA 104 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge~~~--------------e----~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~ 104 (319)
+-++.+.+.+++++.++|- +|.... + ....+..+.. +..+.|.... |+-++.|++.+++
T Consensus 221 e~A~~l~~aGad~I~V~g~-GGt~~a~ie~~r~~~~~~~~~~g~pt~~~L~~v~~-~~~~ipvia~GGI~~g~Dv~KaLa 298 (365)
T 3sr7_A 221 KTIQTAIDLGVKTVDISGR-GGTSFAYIENRRGGNRSYLNQWGQTTAQVLLNAQP-LMDKVEILASGGIRHPLDIIKALV 298 (365)
T ss_dssp HHHHHHHHHTCCEEECCCB-C--------------CGGGTTCSCBHHHHHHHHGG-GTTTSEEEECSSCCSHHHHHHHHH
T ss_pred HHHHHHHHcCCCEEEEeCC-CCcccchhhccccccccccccccccHHHHHHHHHH-hcCCCeEEEeCCCCCHHHHHHHHH
Confidence 3466677889999999775 222110 0 0123333332 3335677776 6899999999999
Q ss_pred cCCcEeecCC
Q psy14115 105 LGADMFDCVF 114 (319)
Q Consensus 105 lGvD~FD~~~ 114 (319)
+|+|.+=..-
T Consensus 299 lGAdaV~ig~ 308 (365)
T 3sr7_A 299 LGAKAVGLSR 308 (365)
T ss_dssp HTCSEEEESH
T ss_pred cCCCEEEECH
Confidence 9999765443
No 85
>2f6u_A GGGPS, (S)-3-O-geranylgeranylglyceryl phosphate synthase; non-canonical TIM-barrel, prenyltransferase, archaeal lipid synthesis, dimer; HET: CIT; 1.55A {Archaeoglobus fulgidus} SCOP: c.1.4.1 PDB: 2f6x_A*
Probab=63.95 E-value=17 Score=32.66 Aligned_cols=57 Identities=11% Similarity=0.072 Sum_probs=47.6
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCC-ChHHHHHHHHcCCcE
Q psy14115 43 KDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIG-FAVDLLICCALGADM 109 (319)
Q Consensus 43 ~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg-~P~~Il~~V~lGvD~ 109 (319)
.+.++.+.+.+.+.+-||+ |.|.+.+...++++.+++ .+.|..+|+-. .|. ..|+|-
T Consensus 23 ~~~~~~l~~~GaD~IelG~-S~g~t~~~~~~~v~~ir~---~~~Pivl~~y~~n~i------~~gvDg 80 (234)
T 2f6u_A 23 DEIIKAVADSGTDAVMISG-TQNVTYEKARTLIEKVSQ---YGLPIVVEPSDPSNV------VYDVDY 80 (234)
T ss_dssp HHHHHHHHTTTCSEEEECC-CTTCCHHHHHHHHHHHTT---SCCCEEECCSSCCCC------CCCSSE
T ss_pred HHHHHHHHHcCCCEEEECC-CCCCCHHHHHHHHHHhcC---CCCCEEEecCCcchh------hcCCCE
Confidence 4457888899999999999 788899999999999987 37999999876 554 668884
No 86
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=63.66 E-value=16 Score=31.31 Aligned_cols=70 Identities=14% Similarity=0.096 Sum_probs=48.9
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCc
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFP 115 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~P 115 (319)
+.++.+.+.+.+...++......+.+...++++.+.+.+| +++. +.++.+|.+...+...|+|.+-...+
T Consensus 79 ~~i~~~~~~Gad~v~l~~~~~~~p~~~~~~~i~~~~~~~~-~~~v-~~~~~t~~e~~~~~~~G~d~i~~~~~ 148 (223)
T 1y0e_A 79 KEVDELIESQCEVIALDATLQQRPKETLDELVSYIRTHAP-NVEI-MADIATVEEAKNAARLGFDYIGTTLH 148 (223)
T ss_dssp HHHHHHHHHTCSEEEEECSCSCCSSSCHHHHHHHHHHHCT-TSEE-EEECSSHHHHHHHHHTTCSEEECTTT
T ss_pred HHHHHHHhCCCCEEEEeeecccCcccCHHHHHHHHHHhCC-CceE-EecCCCHHHHHHHHHcCCCEEEeCCC
Confidence 3456667788999988875422111345677777777775 5544 34888999999999999999865443
No 87
>3o63_A Probable thiamine-phosphate pyrophosphorylase; thiamin biosynthesis, TIM barrel, transferase; 2.35A {Mycobacterium tuberculosis}
Probab=63.44 E-value=20 Score=32.24 Aligned_cols=62 Identities=26% Similarity=0.178 Sum_probs=40.8
Q ss_pred HhCCCceEEeCCCCCCCCHHH----HHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 50 VEKDVNGFAVGGLSGGEAKED----FWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 50 ~~~~~~G~aIgGl~~ge~~~e----~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.+.+++...+|.+-...++.. =++.+..+.+.+|.+.|.+.. |+ +|.++..+.+.|+|.+=.
T Consensus 152 ~~~GaDyI~vgpvf~T~tK~~~~~~gl~~l~~~~~~~~~~iPvvAiGGI-~~~ni~~~~~aGa~gvav 218 (243)
T 3o63_A 152 AAGDADYFCVGPCWPTPTKPGRAAPGLGLVRVAAELGGDDKPWFAIGGI-NAQRLPAVLDAGARRIVV 218 (243)
T ss_dssp HHSSCSEEEECCSSCCCC-----CCCHHHHHHHHTC---CCCEEEESSC-CTTTHHHHHHTTCCCEEE
T ss_pred hhCCCCEEEEcCccCCCCCCCcchhhHHHHHHHHHhccCCCCEEEecCC-CHHHHHHHHHcCCCEEEE
Confidence 357899999987533333322 144556666656668899987 56 999999999999997643
No 88
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=62.22 E-value=20 Score=38.54 Aligned_cols=85 Identities=8% Similarity=0.029 Sum_probs=59.8
Q ss_pred CceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCC------------CCCCHHHHHHHHHHhhcCCCCCCCeEe---c
Q psy14115 27 QNIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLS------------GGEAKEDFWYSVLVSINCLPKDKPRYV---M 91 (319)
Q Consensus 27 q~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~------------~ge~~~e~~~ii~~~~~~LP~dkPr~l---~ 91 (319)
..+++.+-+|.+++.-.++++.+.+.+++++.|.--+ .+.+.+..+++++.+.+.. +.|..+ .
T Consensus 635 ~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~~~~~~~G~~~~~~~~~~~~iv~~v~~~~--~~Pv~vK~~~ 712 (1025)
T 1gte_A 635 NIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHGMGERGMGLACGQDPELVRNICRWVRQAV--QIPFFAKLTP 712 (1025)
T ss_dssp SEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCCCC-----SBGGGCHHHHHHHHHHHHHHC--SSCEEEEECS
T ss_pred CCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCCCCCCCcccccccCHHHHHHHHHHHHHhh--CCceEEEeCC
Confidence 3455556567888888889998888899999984321 1245667788888888766 477775 3
Q ss_pred CCCChHHHH-HHHHcCCcEeecC
Q psy14115 92 GIGFAVDLL-ICCALGADMFDCV 113 (319)
Q Consensus 92 Gvg~P~~Il-~~V~lGvD~FD~~ 113 (319)
++....++. .+.+.|+|.++.+
T Consensus 713 ~~~~~~~~a~~~~~~G~d~i~v~ 735 (1025)
T 1gte_A 713 NVTDIVSIARAAKEGGADGVTAT 735 (1025)
T ss_dssp CSSCHHHHHHHHHHHTCSEEEEC
T ss_pred ChHHHHHHHHHHHHcCCCEEEEe
Confidence 444555654 4568999999873
No 89
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=62.18 E-value=19 Score=33.24 Aligned_cols=72 Identities=21% Similarity=0.188 Sum_probs=48.5
Q ss_pred HHHHhCCCceEEeCCCCC----CCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecCCccccCc
Q psy14115 47 HQMVEKDVNGFAVGGLSG----GEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCVFPTRTAR 120 (319)
Q Consensus 47 ~~l~~~~~~G~aIgGl~~----ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar 120 (319)
+...+.+++++.+.|... |.....-++.+..+.+.+ +.|..+- |+.+|.++..++++|+|.++.-.+...+.
T Consensus 132 ~~~~~~GaD~i~v~g~~~GG~~G~~~~~~~~~l~~v~~~~--~iPviaaGGI~~~~~v~~al~~GAdgV~vGs~~~~~~ 208 (328)
T 2gjl_A 132 LKAERLGVDAVSIDGFECAGHPGEDDIPGLVLLPAAANRL--RVPIIASGGFADGRGLVAALALGADAINMGTRFLATR 208 (328)
T ss_dssp HHHHHTTCSEEEEECTTCSBCCCSSCCCHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTSS
T ss_pred HHHHHcCCCEEEEECCCCCcCCCCccccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECHHHHcCc
Confidence 344567899999855432 211112345666666554 5788875 68999999999999999998765554443
No 90
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=61.55 E-value=31 Score=32.99 Aligned_cols=67 Identities=16% Similarity=0.102 Sum_probs=45.0
Q ss_pred HHHHHHhCCCceEEeCCCCCCCCHH---------HHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecCC
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEAKE---------DFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCVF 114 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~~~---------e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~~ 114 (319)
-++.+.+.+++++.+| ..+|-... ...+.|..+.+... |...- |+.+|.++..++++|+|.+=.-.
T Consensus 154 ~A~~a~~aGaD~I~Vg-~g~G~~~~tr~~~g~g~p~l~aI~~~~~~~~---PVIAdGGI~~~~di~kALa~GAd~V~iGr 229 (361)
T 3r2g_A 154 GADYLASCGADIIKAG-IGGGSVCSTRIKTGFGVPMLTCIQDCSRADR---SIVADGGIKTSGDIVKALAFGADFVMIGG 229 (361)
T ss_dssp HHHHHHHTTCSEEEEC-CSSSSCHHHHHHHCCCCCHHHHHHHHTTSSS---EEEEESCCCSHHHHHHHHHTTCSEEEESG
T ss_pred HHHHHHHcCCCEEEEc-CCCCcCccccccCCccHHHHHHHHHHHHhCC---CEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 3667778899999985 33332211 13455555555543 77664 78999999999999999765443
Q ss_pred c
Q psy14115 115 P 115 (319)
Q Consensus 115 P 115 (319)
+
T Consensus 230 ~ 230 (361)
T 3r2g_A 230 M 230 (361)
T ss_dssp G
T ss_pred H
Confidence 3
No 91
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=60.82 E-value=13 Score=33.94 Aligned_cols=104 Identities=16% Similarity=0.121 Sum_probs=67.4
Q ss_pred HHHHHHHhhcCCCCCceeeeccCCCC-HHHHHHHHHHHHhCCCceEEeCCCC-------------------CCCCHHHHH
Q psy14115 13 WLDRCLAAHRNPTTQNIFPIVQGGLD-EALRKDCAHQMVEKDVNGFAVGGLS-------------------GGEAKEDFW 72 (319)
Q Consensus 13 Wl~r~~~~~~~~~~q~lfgiVqGG~~-~dlR~~s~~~l~~~~~~G~aIgGl~-------------------~ge~~~e~~ 72 (319)
|+++.++..+..++..+.+-+..|.. .+.=.+.++.|.+.+++.+-+|=.- .|.+.+...
T Consensus 4 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElgiPfSDP~aDGp~Iq~a~~~AL~~G~~~~~~~ 83 (267)
T 3vnd_A 4 RYQAKFAALKAQDKGAFVPFVTIGDPSPELSLKIIQTLVDNGADALELGFPFSDPLADGPVIQGANLRSLAAGTTSSDCF 83 (267)
T ss_dssp HHHHHHHHHHHHTCCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCSCCTTCCHHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 45555544332233567777776543 4555677888888899988888321 234455667
Q ss_pred HHHHHhhcCCCCCCCeEecCCCCh------H-HHHHHHHcCCcEe-ecCCccc
Q psy14115 73 YSVLVSINCLPKDKPRYVMGIGFA------V-DLLICCALGADMF-DCVFPTR 117 (319)
Q Consensus 73 ~ii~~~~~~LP~dkPr~l~Gvg~P------~-~Il~~V~lGvD~F-D~~~Ptr 117 (319)
++|+.+++..+ +.|.++|+-.+| + .+-.+.+.|+|.+ -...|..
T Consensus 84 ~~v~~ir~~~~-~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~e 135 (267)
T 3vnd_A 84 DIITKVRAQHP-DMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVE 135 (267)
T ss_dssp HHHHHHHHHCT-TCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGG
T ss_pred HHHHHHHhcCC-CCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHh
Confidence 88888776432 578999987666 3 3667889999974 4445553
No 92
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=60.57 E-value=11 Score=35.95 Aligned_cols=67 Identities=21% Similarity=0.213 Sum_probs=44.9
Q ss_pred HHHHHHHhCCCceEEeCCCCC-----CCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecC
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSG-----GEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~-----ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
+-++.+.+.+++|+.+.|-++ +.+ -+++|..+.+.+..+.|.+.- |+-++.|++.++++|+|.+=.-
T Consensus 229 e~A~~a~~~GaD~I~vsn~GG~~~d~~~~---~~~~L~~i~~av~~~ipVia~GGI~~g~Dv~kaLalGA~aV~iG 301 (352)
T 3sgz_A 229 EDAELAMKHNVQGIVVSNHGGRQLDEVSA---SIDALREVVAAVKGKIEVYMDGGVRTGTDVLKALALGARCIFLG 301 (352)
T ss_dssp HHHHHHHHTTCSEEEECCGGGTSSCSSCC---HHHHHHHHHHHHTTSSEEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHcCCCEEEEeCCCCCccCCCcc---HHHHHHHHHHHhCCCCeEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 346667788999999966321 222 233333333334445678776 6899999999999999976543
No 93
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=59.49 E-value=21 Score=30.18 Aligned_cols=82 Identities=13% Similarity=-0.029 Sum_probs=54.5
Q ss_pred CceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcC
Q psy14115 27 QNIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALG 106 (319)
Q Consensus 27 q~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lG 106 (319)
..+++++-+ .+.+.-.+-++.+.+.+++.+.+.--.. ...+.+..+++.+|++.+.-+-.+-+|.++..+++.|
T Consensus 10 ~~~i~~~~~-~~~~~~~~~~~~~~~~G~~~iev~~~~~-----~~~~~i~~ir~~~~~~~~ig~~~v~~~~~~~~a~~~G 83 (205)
T 1wa3_A 10 HKIVAVLRA-NSVEEAKEKALAVFEGGVHLIEITFTVP-----DADTVIKELSFLKEKGAIIGAGTVTSVEQCRKAVESG 83 (205)
T ss_dssp HCEEEEECC-SSHHHHHHHHHHHHHTTCCEEEEETTST-----THHHHHHHTHHHHHTTCEEEEESCCSHHHHHHHHHHT
T ss_pred CCEEEEEec-CCHHHHHHHHHHHHHCCCCEEEEeCCCh-----hHHHHHHHHHHHCCCCcEEEecccCCHHHHHHHHHcC
Confidence 358888886 6777666778888888899887643111 2234566666656644432221246899999999999
Q ss_pred CcEeecCCcc
Q psy14115 107 ADMFDCVFPT 116 (319)
Q Consensus 107 vD~FD~~~Pt 116 (319)
+|.+ +.|.
T Consensus 84 ad~i--v~~~ 91 (205)
T 1wa3_A 84 AEFI--VSPH 91 (205)
T ss_dssp CSEE--ECSS
T ss_pred CCEE--EcCC
Confidence 9998 4454
No 94
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=59.04 E-value=31 Score=31.34 Aligned_cols=84 Identities=10% Similarity=-0.008 Sum_probs=55.4
Q ss_pred CceeeeccCCCCHHHHHHHHHHHHhCCCc---eEEeCCC--------CCCCCHHHHHHHHHHhhcCCCCCCCeEec-CC-
Q psy14115 27 QNIFPIVQGGLDEALRKDCAHQMVEKDVN---GFAVGGL--------SGGEAKEDFWYSVLVSINCLPKDKPRYVM-GI- 93 (319)
Q Consensus 27 q~lfgiVqGG~~~dlR~~s~~~l~~~~~~---G~aIgGl--------~~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gv- 93 (319)
..+++.| +|...+.-.++++.+.+.+++ ++-|.-. ..|.+.+...++++.+.+.+ +.|..+- ..
T Consensus 94 ~p~~~~i-~g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~~g~~~~g~~~~~~~~ii~~vr~~~--~~Pv~vK~~~~ 170 (314)
T 2e6f_A 94 KPLFLSI-SGLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNVPGKPQVAYDFEAMRTYLQQVSLAY--GLPFGVKMPPY 170 (314)
T ss_dssp CCEEEEE-CCSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCSTTCCCGGGSHHHHHHHHHHHHHHH--CSCEEEEECCC
T ss_pred CcEEEEe-CCCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCCCCchhhcCCHHHHHHHHHHHHHhc--CCCEEEEECCC
Confidence 3455454 457888888888888877788 6776422 22346677788888887765 4777662 32
Q ss_pred CChHHH----HHHHHcC-CcEeecC
Q psy14115 94 GFAVDL----LICCALG-ADMFDCV 113 (319)
Q Consensus 94 g~P~~I----l~~V~lG-vD~FD~~ 113 (319)
-++.++ -.+.+.| +|.++..
T Consensus 171 ~~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 171 FDIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp CCHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CCHHHHHHHHHHHHhcCCceEEEEe
Confidence 255663 3456899 9998754
No 95
>1yad_A Regulatory protein TENI; TIM barrel, transcription; 2.10A {Bacillus subtilis} PDB: 3qh2_A*
Probab=57.47 E-value=25 Score=30.21 Aligned_cols=67 Identities=16% Similarity=0.036 Sum_probs=42.5
Q ss_pred HHHHHhCCCceEEeCCCCCCCCH----HHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecCCc
Q psy14115 46 AHQMVEKDVNGFAVGGLSGGEAK----EDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCVFP 115 (319)
Q Consensus 46 ~~~l~~~~~~G~aIgGl~~ge~~----~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~~P 115 (319)
++...+.+++.+.+|..-.+.++ ..-++.+..+.+.+ +.|.++. |+ +|.++..+++.|+|.++....
T Consensus 123 ~~~a~~~gaD~i~~~~~f~~~~~~g~~~~~~~~l~~~~~~~--~~pvia~GGI-~~~nv~~~~~~Ga~gv~vgs~ 194 (221)
T 1yad_A 123 AVQAEKEDADYVLFGHVFETDCKKGLEGRGVSLLSDIKQRI--SIPVIAIGGM-TPDRLRDVKQAGADGIAVMSG 194 (221)
T ss_dssp HHHHHHTTCSEEEEECCC----------CHHHHHHHHHHHC--CSCEEEESSC-CGGGHHHHHHTTCSEEEESHH
T ss_pred HHHHHhCCCCEEEECCccccCCCCCCCCCCHHHHHHHHHhC--CCCEEEECCC-CHHHHHHHHHcCCCEEEEhHH
Confidence 34444578888888764222111 11245555554433 5788876 57 999999999999999987643
No 96
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=57.06 E-value=20 Score=35.38 Aligned_cols=68 Identities=12% Similarity=-0.062 Sum_probs=51.6
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecC
Q psy14115 43 KDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 43 ~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
.+.++.+.+.+++++.|..-. |. ....+++++.+.+.+| +.|...-++.++++...+++.|+|.++..
T Consensus 257 ~~~a~~~~~aG~d~v~i~~~~-G~-~~~~~~~i~~i~~~~~-~~pvi~~~v~t~~~a~~l~~aGad~I~vg 324 (514)
T 1jcn_A 257 KYRLDLLTQAGVDVIVLDSSQ-GN-SVYQIAMVHYIKQKYP-HLQVIGGNVVTAAQAKNLIDAGVDGLRVG 324 (514)
T ss_dssp HHHHHHHHHTTCSEEEECCSC-CC-SHHHHHHHHHHHHHCT-TCEEEEEEECSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEeeccC-Cc-chhHHHHHHHHHHhCC-CCceEecccchHHHHHHHHHcCCCEEEEC
Confidence 345566778899999986532 32 3445688888888875 67776656899999999999999999773
No 97
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=56.68 E-value=20 Score=33.80 Aligned_cols=79 Identities=15% Similarity=0.075 Sum_probs=53.0
Q ss_pred eeeccCCCCHHHHHHHHHHHHhC--CCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCC
Q psy14115 30 FPIVQGGLDEALRKDCAHQMVEK--DVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGA 107 (319)
Q Consensus 30 fgiVqGG~~~dlR~~s~~~l~~~--~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGv 107 (319)
+++.+| ...+.. +-++.+.+. +++.+.+-. +.| +....++.|+.+.+..| +.|..+-++.++++...+++.|+
T Consensus 109 v~~~~g-~~~~~~-~~~~~l~~~~~g~~~i~i~~-~~g-~~~~~~~~i~~lr~~~~-~~~vi~g~v~t~e~A~~a~~aGa 183 (351)
T 2c6q_A 109 LAASSG-TGSSDF-EQLEQILEAIPQVKYICLDV-ANG-YSEHFVEFVKDVRKRFP-QHTIMAGNVVTGEMVEELILSGA 183 (351)
T ss_dssp EEEEEC-SSHHHH-HHHHHHHHHCTTCCEEEEEC-SCT-TBHHHHHHHHHHHHHCT-TSEEEEEEECSHHHHHHHHHTTC
T ss_pred eEeecC-CChHHH-HHHHHHHhccCCCCEEEEEe-cCC-CcHHHHHHHHHHHHhcC-CCeEEEEeCCCHHHHHHHHHhCC
Confidence 344455 444332 335555554 677766642 122 34567888998888886 56766656789999999999999
Q ss_pred cEeecC
Q psy14115 108 DMFDCV 113 (319)
Q Consensus 108 D~FD~~ 113 (319)
|.++..
T Consensus 184 D~I~v~ 189 (351)
T 2c6q_A 184 DIIKVG 189 (351)
T ss_dssp SEEEEC
T ss_pred CEEEEC
Confidence 999774
No 98
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=56.45 E-value=19 Score=34.44 Aligned_cols=69 Identities=10% Similarity=-0.012 Sum_probs=50.4
Q ss_pred HHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeec
Q psy14115 41 LRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 41 lR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.-.+.++.+.+.+++.+.|.... | ..+.++++|+.+.+..| +.|...=++.+|++...++..|+|.++.
T Consensus 100 ~~~e~~~~a~~aGvdvI~id~a~-G-~~~~~~e~I~~ir~~~~-~~~Vi~G~V~T~e~A~~a~~aGaD~I~V 168 (361)
T 3r2g_A 100 NELQRAEALRDAGADFFCVDVAH-A-HAKYVGKTLKSLRQLLG-SRCIMAGNVATYAGADYLASCGADIIKA 168 (361)
T ss_dssp HHHHHHHHHHHTTCCEEEEECSC-C-SSHHHHHHHHHHHHHHT-TCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEeCCC-C-CcHhHHHHHHHHHHhcC-CCeEEEcCcCCHHHHHHHHHcCCCEEEE
Confidence 33456788888899988885422 2 23556788888887766 4444442489999999999999999985
No 99
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=55.55 E-value=35 Score=32.45 Aligned_cols=69 Identities=17% Similarity=0.122 Sum_probs=43.3
Q ss_pred HHHHHHHhCCCceEEeCCCCCC------------CCHHHHHHHHHHhhcCCC-CCCCeEec-CCCChHHHHHHHHcCCcE
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGG------------EAKEDFWYSVLVSINCLP-KDKPRYVM-GIGFAVDLLICCALGADM 109 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~g------------e~~~e~~~ii~~~~~~LP-~dkPr~l~-Gvg~P~~Il~~V~lGvD~ 109 (319)
+-++.+.+.+++++.+|+ .+| .+. +..+..+.+.++ .+.|.+.. |+.+|.++..++++|+|.
T Consensus 206 ~~a~~a~~~Gad~I~vg~-~~G~~~~~~~~~~~g~p~---~~~l~~v~~~~~~~~ipVia~GGI~~~~d~~~ala~GAd~ 281 (404)
T 1eep_A 206 EAALDLISVGADCLKVGI-GPGSICTTRIVAGVGVPQ---ITAICDVYEACNNTNICIIADGGIRFSGDVVKAIAAGADS 281 (404)
T ss_dssp HHHHHHHTTTCSEEEECS-SCSTTSHHHHHHCCCCCH---HHHHHHHHHHHTTSSCEEEEESCCCSHHHHHHHHHHTCSE
T ss_pred HHHHHHHhcCCCEEEECC-CCCcCcCccccCCCCcch---HHHHHHHHHHHhhcCceEEEECCCCCHHHHHHHHHcCCCH
Confidence 345666678999999942 211 122 223333333222 25677764 789999999999999998
Q ss_pred eecCCcc
Q psy14115 110 FDCVFPT 116 (319)
Q Consensus 110 FD~~~Pt 116 (319)
+=.--+.
T Consensus 282 V~iG~~~ 288 (404)
T 1eep_A 282 VMIGNLF 288 (404)
T ss_dssp EEECHHH
T ss_pred HhhCHHH
Confidence 7554333
No 100
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=54.73 E-value=54 Score=30.42 Aligned_cols=73 Identities=15% Similarity=0.151 Sum_probs=50.7
Q ss_pred CCCHHHHHHHHHHHHhCC--CceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecC-CCChHHHHHHHHcCCcEeec
Q psy14115 36 GLDEALRKDCAHQMVEKD--VNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMG-IGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 36 G~~~dlR~~s~~~l~~~~--~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~G-vg~P~~Il~~V~lGvD~FD~ 112 (319)
|..++.. +.++.+.+.+ ++...+.. +.| .....+++|+.+++..| .|..+-| +.++++...+++.|+|.++.
T Consensus 102 g~~~~~~-~~a~~~~~~g~~~~~i~i~~-~~G-~~~~~~~~i~~lr~~~~--~~~vi~G~v~s~e~A~~a~~aGad~Ivv 176 (336)
T 1ypf_A 102 GVKEDEY-EFVQQLAAEHLTPEYITIDI-AHG-HSNAVINMIQHIKKHLP--ESFVIAGNVGTPEAVRELENAGADATKV 176 (336)
T ss_dssp CCSHHHH-HHHHHHHHTTCCCSEEEEEC-SSC-CSHHHHHHHHHHHHHCT--TSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred CCCHHHH-HHHHHHHhcCCCCCEEEEEC-CCC-CcHHHHHHHHHHHHhCC--CCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 3444433 3366677766 77766532 223 45667888888888775 3555667 88999999999999999887
Q ss_pred C
Q psy14115 113 V 113 (319)
Q Consensus 113 ~ 113 (319)
.
T Consensus 177 s 177 (336)
T 1ypf_A 177 G 177 (336)
T ss_dssp C
T ss_pred e
Confidence 3
No 101
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=54.33 E-value=19 Score=34.26 Aligned_cols=84 Identities=18% Similarity=0.064 Sum_probs=53.4
Q ss_pred ceeeeccCCCCHHHHHHHHHHHHhCC-CceEEeC-------------------------CCCCCCCHHHHHHHHHHhhcC
Q psy14115 28 NIFPIVQGGLDEALRKDCAHQMVEKD-VNGFAVG-------------------------GLSGGEAKEDFWYSVLVSINC 81 (319)
Q Consensus 28 ~lfgiVqGG~~~dlR~~s~~~l~~~~-~~G~aIg-------------------------Gl~~ge~~~e~~~ii~~~~~~ 81 (319)
.++.=+-.+.+.+.-.+.++.+.+.+ ++|+.+- |+|+-.-+..-+++|..+.+.
T Consensus 195 PV~vKi~p~~d~~~~~~~a~~~~~~Gg~d~I~~~NT~~~g~~idi~~~~~~~~~~~~~gGlSG~~i~p~a~~~i~~v~~~ 274 (354)
T 4ef8_A 195 SFGVKMPPYFDFAHFDAAAEILNEFPKVQFITCINSIGNGLVIDAETESVVIKPKQGFGGLGGRYVLPTALANINAFYRR 274 (354)
T ss_dssp CEEEEECCCCSHHHHHHHHHHHHTCTTEEEEEECCCEEEEECEETTTTEESCSGGGGEEEEEGGGGHHHHHHHHHHHHHH
T ss_pred CeEEEecCCCCHHHHHHHHHHHHhCCCccEEEEecccCcceeeeccCCccccccccccCCCCCCCCchHHHHHHHHHHHh
Confidence 45555555666554455566666776 8887641 222111112346777777766
Q ss_pred CCCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 82 LPKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 82 LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.| +.|.... ||-+++|+..++..|+|.+-.
T Consensus 275 ~~-~ipII~~GGI~s~~da~~~l~aGAd~V~v 305 (354)
T 4ef8_A 275 CP-GKLIFGCGGVYTGEDAFLHVLAGASMVQV 305 (354)
T ss_dssp CT-TSEEEEESCCCSHHHHHHHHHHTEEEEEE
T ss_pred CC-CCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 33 5777765 689999999999999997644
No 102
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=54.22 E-value=39 Score=33.17 Aligned_cols=69 Identities=22% Similarity=0.243 Sum_probs=45.9
Q ss_pred HHHHHHhCCCceEEeCCCC------------CCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEee
Q psy14115 45 CAHQMVEKDVNGFAVGGLS------------GGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFD 111 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~------------~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD 111 (319)
.++.+.+.+++++.+| .+ .|.+...-...+..+.+.. +.|.... |+.+|.++..++++|+|.+=
T Consensus 309 ~a~~l~~aGad~I~vg-~~~G~~~~t~~~~~~g~~~~~~~~~~~~~~~~~--~ipVia~GGI~~~~di~kala~GAd~V~ 385 (514)
T 1jcn_A 309 QAKNLIDAGVDGLRVG-MGCGSICITQEVMACGRPQGTAVYKVAEYARRF--GVPIIADGGIQTVGHVVKALALGASTVM 385 (514)
T ss_dssp HHHHHHHHTCSEEEEC-SSCSCCBTTBCCCSCCCCHHHHHHHHHHHHGGG--TCCEEEESCCCSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEEC-CCCCcccccccccCCCccchhHHHHHHHHHhhC--CCCEEEECCCCCHHHHHHHHHcCCCeee
Confidence 3666777899999883 22 1223333344555555433 4677765 68999999999999999875
Q ss_pred cCCcc
Q psy14115 112 CVFPT 116 (319)
Q Consensus 112 ~~~Pt 116 (319)
.-.+.
T Consensus 386 iG~~~ 390 (514)
T 1jcn_A 386 MGSLL 390 (514)
T ss_dssp ESTTT
T ss_pred ECHHH
Confidence 54443
No 103
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=54.02 E-value=17 Score=33.20 Aligned_cols=61 Identities=20% Similarity=0.106 Sum_probs=40.2
Q ss_pred hCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 51 EKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 51 ~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.+++-+.+++-......-+ .+.+..+.+.+|.+.|... .|+.+|+++..+...|+|-|=.
T Consensus 180 ~~Gad~IGv~~r~l~~~~~d-l~~~~~l~~~v~~~~pvVaegGI~t~edv~~l~~~GadgvlV 241 (272)
T 3qja_A 180 KAGAKVIGVNARDLMTLDVD-RDCFARIAPGLPSSVIRIAESGVRGTADLLAYAGAGADAVLV 241 (272)
T ss_dssp HHTCSEEEEESBCTTTCCBC-TTHHHHHGGGSCTTSEEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HCCCCEEEECCCcccccccC-HHHHHHHHHhCcccCEEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 34777777775321111111 1223445566788888875 6899999999999999998754
No 104
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=53.59 E-value=61 Score=28.32 Aligned_cols=76 Identities=16% Similarity=0.070 Sum_probs=50.7
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeC-CC-CCCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEe
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVG-GL-SGGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMF 110 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIg-Gl-~~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~F 110 (319)
-++++.+.-.+.++.+.+.+++++... |. .+|-+.+.+..+.+. ++.+.|.... |+-+|++.+..+.+|+|.+
T Consensus 126 ~~~l~~~~~~~~a~~a~eaGad~I~tstg~~~gga~~~~i~~v~~~----v~~~ipVia~GGI~t~~da~~~l~aGA~~i 201 (225)
T 1mzh_A 126 TPYLNEEEIKKAVEICIEAGADFIKTSTGFAPRGTTLEEVRLIKSS----AKGRIKVKASGGIRDLETAISMIEAGADRI 201 (225)
T ss_dssp GGGCCHHHHHHHHHHHHHHTCSEEECCCSCSSSCCCHHHHHHHHHH----HTTSSEEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred CCCCCHHHHHHHHHHHHHhCCCEEEECCCCCCCCCCHHHHHHHHHH----hCCCCcEEEECCCCCHHHHHHHHHhCchHH
Confidence 456777666667777778888888654 44 234444444444433 3445677776 5789999999999999965
Q ss_pred ecC
Q psy14115 111 DCV 113 (319)
Q Consensus 111 D~~ 113 (319)
-..
T Consensus 202 G~s 204 (225)
T 1mzh_A 202 GTS 204 (225)
T ss_dssp EES
T ss_pred HHc
Confidence 433
No 105
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=52.61 E-value=20 Score=33.24 Aligned_cols=72 Identities=18% Similarity=0.137 Sum_probs=46.4
Q ss_pred HHHHHhCCCceEEeCCCCCC-C-CHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecCCccccC
Q psy14115 46 AHQMVEKDVNGFAVGGLSGG-E-AKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCVFPTRTA 119 (319)
Q Consensus 46 ~~~l~~~~~~G~aIgGl~~g-e-~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~~Ptr~A 119 (319)
++.+.+.+++++.+.|...| - ....-++.+..+.+.+ +.|..+- |+.+|.++..++++|+|.++...+...+
T Consensus 123 a~~~~~~GaD~i~v~g~~~GG~~g~~~~~~ll~~i~~~~--~iPViaaGGI~~~~~~~~al~~GAdgV~vGs~~l~~ 197 (332)
T 2z6i_A 123 AKRMEKIGADAVIAEGMEAGGHIGKLTTMTLVRQVATAI--SIPVIAAGGIADGEGAAAGFMLGAEAVQVGTRFVVA 197 (332)
T ss_dssp HHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEEEECHHHHTB
T ss_pred HHHHHHcCCCEEEEECCCCCCCCCCccHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEecHHHhcC
Confidence 45556778999988543211 1 0111234444444433 4788775 6899999999999999999876555444
No 106
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=52.57 E-value=76 Score=30.00 Aligned_cols=66 Identities=14% Similarity=0.022 Sum_probs=49.3
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeec
Q psy14115 43 KDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 43 ~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.+-++.+.+.+++.+.|... .| +.+.+.+.|+.+.+.+ +.|..+-++.+|++...++..|+|.+..
T Consensus 107 ~e~a~~l~eaGad~I~ld~a-~G-~~~~~~~~i~~i~~~~--~~~Vivg~v~t~e~A~~l~~aGaD~I~V 172 (361)
T 3khj_A 107 IERAKLLVEAGVDVIVLDSA-HG-HSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKELIENGADGIKV 172 (361)
T ss_dssp HHHHHHHHHTTCSEEEECCS-CC-SBHHHHHHHHHHHHHC--CCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCcCeEEEeCC-CC-CcHHHHHHHHHHHHhc--CCcEEEccCCCHHHHHHHHHcCcCEEEE
Confidence 55677788889998887643 23 3455667777777766 4666554679999999999999999986
No 107
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=52.56 E-value=29 Score=30.16 Aligned_cols=63 Identities=14% Similarity=0.093 Sum_probs=42.2
Q ss_pred HHHHHHHhCCCceEEeCCCC-----CCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 44 DCAHQMVEKDVNGFAVGGLS-----GGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~-----~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.++.+.+.+++.+.+-+.. .|.+ ++.+..+.+.+ +.|...- |+.+|+++..+.+.|+|-+=.
T Consensus 155 e~~~~~~~~G~~~i~~~~~~~~g~~~g~~----~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~v 223 (253)
T 1thf_D 155 DWVVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALA 223 (253)
T ss_dssp HHHHHHHHTTCSEEEEEETTTTTSCSCCC----HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHCCCCEEEEEeccCCCCCCCCC----HHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCChHHHH
Confidence 34555666788888875432 1222 34455555544 5788874 799999999999999997644
No 108
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=51.44 E-value=34 Score=29.50 Aligned_cols=66 Identities=12% Similarity=0.072 Sum_probs=47.5
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCC-HHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEee
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGEA-KEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFD 111 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge~-~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD 111 (319)
+.++...+.+.+.+.++......+ .+...++++.+.+..| +.+ .+.++.+|.+...+...|+|++.
T Consensus 92 ~~i~~~~~~Gad~V~l~~~~~~~~~~~~~~~~i~~i~~~~~-~~~-v~~~~~t~~ea~~a~~~Gad~i~ 158 (234)
T 1yxy_A 92 TEVDQLAALNIAVIAMDCTKRDRHDGLDIASFIRQVKEKYP-NQL-LMADISTFDEGLVAHQAGIDFVG 158 (234)
T ss_dssp HHHHHHHTTTCSEEEEECCSSCCTTCCCHHHHHHHHHHHCT-TCE-EEEECSSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHHcCCCEEEEcccccCCCCCccHHHHHHHHHHhCC-CCe-EEEeCCCHHHHHHHHHcCCCEEe
Confidence 446777888999999887643221 1245667777777665 454 44588999999999999999984
No 109
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=51.19 E-value=31 Score=31.02 Aligned_cols=58 Identities=16% Similarity=0.200 Sum_probs=44.0
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCC-ChHHHHHHHHcCCcEe
Q psy14115 43 KDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIG-FAVDLLICCALGADMF 110 (319)
Q Consensus 43 ~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg-~P~~Il~~V~lGvD~F 110 (319)
.+.++.+.+.+.+..-+|| +.|.+.+...++++.+++ .+.|..+|+-. .|. +.|+|-+
T Consensus 23 ~~~~~~l~~~GaD~ielG~-S~Gvt~~~~~~~v~~ir~---~~~Pivlm~y~~n~i------~~G~dg~ 81 (240)
T 1viz_A 23 DEQLEILCESGTDAVIIGG-SDGVTEDNVLRMMSKVRR---FLVPCVLEVSAIEAI------VPGFDLY 81 (240)
T ss_dssp HHHHHHHHTSCCSEEEECC-----CHHHHHHHHHHHTT---SSSCEEEECSCGGGC------CSCCSEE
T ss_pred HHHHHHHHHcCCCEEEECC-CCCCCHHHHHHHHHHhhC---cCCCEEEecCccccc------cCCCCEE
Confidence 4557888899999999999 788888889999999987 37999998755 443 6788853
No 110
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=51.11 E-value=65 Score=31.32 Aligned_cols=67 Identities=21% Similarity=0.260 Sum_probs=41.7
Q ss_pred HHHHHhCCCceEEeCCCCC-----------CCCHHHHHHHHHHhhcCCCC-CCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 46 AHQMVEKDVNGFAVGGLSG-----------GEAKEDFWYSVLVSINCLPK-DKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 46 ~~~l~~~~~~G~aIgGl~~-----------ge~~~e~~~ii~~~~~~LP~-dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
++.+.+.+++++.+|+-.+ |.+.-+ .+..+.+.++. +.|...- |+.+|.++..++++|+|.+=.
T Consensus 292 a~~l~~~G~d~I~v~~~~G~~~~~~~~~~~g~p~~~---~l~~v~~~~~~~~ipvia~GGI~~~~di~kala~GAd~V~i 368 (494)
T 1vrd_A 292 TEALIKAGADAVKVGVGPGSICTTRVVAGVGVPQLT---AVMECSEVARKYDVPIIADGGIRYSGDIVKALAAGAESVMV 368 (494)
T ss_dssp HHHHHHTTCSEEEECSSCSTTCHHHHHHCCCCCHHH---HHHHHHHHHHTTTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEEcCCCCccccccccCCCCccHHH---HHHHHHHHHhhcCCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 4667778999999954221 112222 22222222221 5677765 789999999999999998755
Q ss_pred CCc
Q psy14115 113 VFP 115 (319)
Q Consensus 113 ~~P 115 (319)
--|
T Consensus 369 Gr~ 371 (494)
T 1vrd_A 369 GSI 371 (494)
T ss_dssp SHH
T ss_pred CHH
Confidence 433
No 111
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=51.04 E-value=19 Score=33.37 Aligned_cols=73 Identities=15% Similarity=0.147 Sum_probs=46.1
Q ss_pred HHHHHhCCCceEEeCCCCC-CCC-HHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecCCccccCc
Q psy14115 46 AHQMVEKDVNGFAVGGLSG-GEA-KEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCVFPTRTAR 120 (319)
Q Consensus 46 ~~~l~~~~~~G~aIgGl~~-ge~-~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar 120 (319)
++.+.+.+++++.+-|... |-. ...-++.+..+.+.+ +.|.++- |+.+|.++..++++|+|.++...+...+.
T Consensus 137 a~~a~~~GaD~i~v~g~~~GG~~G~~~~~~ll~~i~~~~--~iPviaaGGI~~~~dv~~al~~GA~gV~vGs~~~~~~ 212 (326)
T 3bo9_A 137 ARMVERAGADAVIAEGMESGGHIGEVTTFVLVNKVSRSV--NIPVIAAGGIADGRGMAAAFALGAEAVQMGTRFVASV 212 (326)
T ss_dssp HHHHHHTTCSCEEEECTTSSEECCSSCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESHHHHTBS
T ss_pred HHHHHHcCCCEEEEECCCCCccCCCccHHHHHHHHHHHc--CCCEEEECCCCCHHHHHHHHHhCCCEEEechHHHcCc
Confidence 3445567899998844321 110 011234444444433 4778775 68999999999999999998776555443
No 112
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=50.53 E-value=46 Score=28.85 Aligned_cols=67 Identities=18% Similarity=0.064 Sum_probs=48.2
Q ss_pred HHHHHHHhCCCceEEeCCCC-CCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 44 DCAHQMVEKDVNGFAVGGLS-GGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~-~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.++.+.+.+++.+.+-+.. .+.......+.+..+++.. +.|..+. |+-+|.++-.+.+.|+|.+-.
T Consensus 35 ~~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~--~iPvi~~Ggi~~~~~~~~~~~~Gad~V~l 103 (252)
T 1ka9_F 35 EAARAYDEAGADELVFLDISATHEERAILLDVVARVAERV--FIPLTVGGGVRSLEDARKLLLSGADKVSV 103 (252)
T ss_dssp HHHHHHHHHTCSCEEEEECCSSTTCHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHHcCCCEEEEEcCCccccCccccHHHHHHHHHhC--CCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 44666677788877765554 2344555667777777764 5889886 578899999999999997643
No 113
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=50.43 E-value=20 Score=32.17 Aligned_cols=62 Identities=15% Similarity=0.138 Sum_probs=40.1
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCccc
Q psy14115 43 KDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFPTR 117 (319)
Q Consensus 43 ~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr 117 (319)
.+.++...+.+.+.....++ ++ ++++.+... ...+++|+.+|.++..+.++|+|.+=. ||+.
T Consensus 96 ~~~a~~Ai~AGA~fIvsP~~----~~----~vi~~~~~~----gi~~ipGv~TptEi~~A~~~Gad~vK~-FPa~ 157 (232)
T 4e38_A 96 GEQALAAKEAGATFVVSPGF----NP----NTVRACQEI----GIDIVPGVNNPSTVEAALEMGLTTLKF-FPAE 157 (232)
T ss_dssp HHHHHHHHHHTCSEEECSSC----CH----HHHHHHHHH----TCEEECEECSHHHHHHHHHTTCCEEEE-CSTT
T ss_pred HHHHHHHHHcCCCEEEeCCC----CH----HHHHHHHHc----CCCEEcCCCCHHHHHHHHHcCCCEEEE-CcCc
Confidence 33444555556666654442 22 233443332 345777999999999999999998854 8864
No 114
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=49.75 E-value=29 Score=32.59 Aligned_cols=70 Identities=14% Similarity=0.090 Sum_probs=45.3
Q ss_pred HHHHhCCCceEEeCCCC----CCCC-H--------HHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 47 HQMVEKDVNGFAVGGLS----GGEA-K--------EDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 47 ~~l~~~~~~G~aIgGl~----~ge~-~--------~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.+.+.+++.+.+-|.. .|.. + ...++.+..+.+.+ +.|.+.- |+.+|.++..++++|+|.++.
T Consensus 159 ~~a~~~GaD~i~v~g~~~GGh~g~~~~~~~~~~~~~~~~~~l~~i~~~~--~iPViaaGGI~~~~~~~~~l~~GAd~V~v 236 (369)
T 3bw2_A 159 RAVEAAGADAVIAQGVEAGGHQGTHRDSSEDDGAGIGLLSLLAQVREAV--DIPVVAAGGIMRGGQIAAVLAAGADAAQL 236 (369)
T ss_dssp HHHHHTTCSEEEEECTTCSEECCCSSCCGGGTTCCCCHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHcCCCEEEEeCCCcCCcCCCcccccccccccccHHHHHHHHHHhc--CceEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 34556789999883321 1111 0 12355555555443 5788876 588999999999999999987
Q ss_pred CCcccc
Q psy14115 113 VFPTRT 118 (319)
Q Consensus 113 ~~Ptr~ 118 (319)
..+...
T Consensus 237 Gs~~~~ 242 (369)
T 3bw2_A 237 GTAFLA 242 (369)
T ss_dssp SHHHHT
T ss_pred ChHHhC
Confidence 644433
No 115
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=49.66 E-value=48 Score=32.63 Aligned_cols=66 Identities=18% Similarity=0.105 Sum_probs=50.9
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeec
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.++.+.+.+++.+.|..-. | ......+.|+.+.+..| +.|..+-++.++++...++..|+|.+..
T Consensus 232 ~~a~~l~~aG~d~I~id~a~-g-~~~~~~~~v~~i~~~~p-~~~Vi~g~v~t~e~a~~l~~aGaD~I~v 297 (490)
T 4avf_A 232 ERVAALVAAGVDVVVVDTAH-G-HSKGVIERVRWVKQTFP-DVQVIGGNIATAEAAKALAEAGADAVKV 297 (490)
T ss_dssp HHHHHHHHTTCSEEEEECSC-C-SBHHHHHHHHHHHHHCT-TSEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHhhcccceEEecccC-C-cchhHHHHHHHHHHHCC-CceEEEeeeCcHHHHHHHHHcCCCEEEE
Confidence 34667778899999887543 2 34567788888888876 5676664589999999999999999985
No 116
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=49.61 E-value=21 Score=35.58 Aligned_cols=69 Identities=19% Similarity=0.191 Sum_probs=44.2
Q ss_pred HHHHHHHhCCCceEEeCCCCCCC---CHHHHHHHHHHhhcCC-----CCCCCeEec-CCCChHHHHHHHHcCCcEeecC
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGE---AKEDFWYSVLVSINCL-----PKDKPRYVM-GIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge---~~~e~~~ii~~~~~~L-----P~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
+-++.+.+.+++++.++|- +|- ....-++.+..+.+.+ ..+.|.+.. |+-++.|++.++++|+|.+=.-
T Consensus 355 e~A~~a~~aGad~I~vs~h-gG~~~d~~~~~~~~l~~v~~~v~~~~~~~~ipVia~GGI~~g~Dv~kaLalGAdaV~iG 432 (511)
T 1kbi_A 355 EDVIKAAEIGVSGVVLSNH-GGRQLDFSRAPIEVLAETMPILEQRNLKDKLEVFVDGGVRRGTDVLKALCLGAKGVGLG 432 (511)
T ss_dssp HHHHHHHHTTCSEEEECCT-TTTSSTTCCCHHHHHHHHHHHHHTTTCBTTBEEEEESSCCSHHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHcCCCEEEEcCC-CCccCCCCCchHHHHHHHHHHHHhhccCCCcEEEEECCCCCHHHHHHHHHcCCCEEEEC
Confidence 3466677889999999763 221 1011123333333333 235677776 6899999999999999976543
No 117
>1ujp_A Tryptophan synthase alpha chain; riken structural genomics/P initiative, RSGI, structural genomics, lyase; HET: CIT; 1.34A {Thermus thermophilus} SCOP: c.1.2.4 PDB: 1wxj_A*
Probab=48.21 E-value=43 Score=30.43 Aligned_cols=87 Identities=13% Similarity=0.088 Sum_probs=57.6
Q ss_pred CceeeeccCCC-CHHHHHHHHHHHHhCCCceEEeCCCC-------------------CCCCHHHHHHHHHHhhcCCCCCC
Q psy14115 27 QNIFPIVQGGL-DEALRKDCAHQMVEKDVNGFAVGGLS-------------------GGEAKEDFWYSVLVSINCLPKDK 86 (319)
Q Consensus 27 q~lfgiVqGG~-~~dlR~~s~~~l~~~~~~G~aIgGl~-------------------~ge~~~e~~~ii~~~~~~LP~dk 86 (319)
..+.+-|..|. +.+.=.+.++.|.+. ++++-||..- .|.+.+.+.+++..+++. + +.
T Consensus 16 ~~li~~i~~GdP~~~~~~~~~~~l~~~-aD~IElG~PfsdP~adGp~Iq~a~~~Al~~G~~~~~~~~~v~~ir~~-~-~~ 92 (271)
T 1ujp_A 16 AALIPYLTAGFPSREGFLQAVEEVLPY-ADLLEIGLPYSDPLGDGPVIQRASELALRKGMSVQGALELVREVRAL-T-EK 92 (271)
T ss_dssp CEEEEEEETTSSCHHHHHHHHHHHGGG-CSSEEEECCCCC----CHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH-C-CS
T ss_pred ceEEEEecCCCCChHHHHHHHHHHHhc-CCEEEECCCCCCcccccHHHHHHHHHHHHcCCCHHHHHHHHHHHHhc-C-CC
Confidence 45677776554 333334566777777 9999998742 234445667788888876 2 68
Q ss_pred CeEecCCCCh-------HHHHHHHHcCCc-EeecCCcc
Q psy14115 87 PRYVMGIGFA-------VDLLICCALGAD-MFDCVFPT 116 (319)
Q Consensus 87 Pr~l~Gvg~P-------~~Il~~V~lGvD-~FD~~~Pt 116 (319)
|..+|+-..| ..+-.+.+.|+| ++-...|.
T Consensus 93 Pii~m~y~n~v~~~g~~~f~~~~~~aG~dGviv~Dl~~ 130 (271)
T 1ujp_A 93 PLFLMTYLNPVLAWGPERFFGLFKQAGATGVILPDLPP 130 (271)
T ss_dssp CEEEECCHHHHHHHCHHHHHHHHHHHTCCEEECTTCCG
T ss_pred CEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEecCCCH
Confidence 9999875444 335568899999 66555554
No 118
>2tps_A Protein (thiamin phosphate synthase); thiamin biosynthesis, TIM barrel; HET: TPS; 1.25A {Bacillus subtilis} SCOP: c.1.3.1 PDB: 1g4t_A* 3o15_A* 1g6c_A* 1g4e_A* 1g69_A* 3o16_A 1g4s_A* 1g4p_A* 1g67_A*
Probab=47.40 E-value=21 Score=30.46 Aligned_cols=64 Identities=14% Similarity=-0.014 Sum_probs=39.6
Q ss_pred HHhCCCceEEeCCCCCCCC-----HHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecCC
Q psy14115 49 MVEKDVNGFAVGGLSGGEA-----KEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCVF 114 (319)
Q Consensus 49 l~~~~~~G~aIgGl~~ge~-----~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~~ 114 (319)
..+.+++.+.+|-+..... ...-++.+..+.+.++ +.|.++. |+. |+++..+.+.|+|.++...
T Consensus 132 a~~~g~d~v~~~~v~~t~~~~~~~~~~~~~~l~~~~~~~~-~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs 201 (227)
T 2tps_A 132 AEEDGADYVGLGPIYPTETKKDTRAVQGVSLIEAVRRQGI-SIPIVGIGGIT-IDNAAPVIQAGADGVSMIS 201 (227)
T ss_dssp HHHHTCSEEEECCSSCCCSSSSCCCCCTTHHHHHHHHTTC-CCCEEEESSCC-TTTSHHHHHTTCSEEEESH
T ss_pred HHhCCCCEEEECCCcCCCCCCCCCCccCHHHHHHHHHhCC-CCCEEEEcCCC-HHHHHHHHHcCCCEEEEhH
Confidence 3456788888753211000 0111344455555444 5788876 566 9999999999999998754
No 119
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=47.39 E-value=1.5e+02 Score=27.83 Aligned_cols=83 Identities=10% Similarity=-0.014 Sum_probs=53.8
Q ss_pred ceeeeccCCCCHHHHHHHHHHHHhCCCc-eEEe--C------CCCCCCCHHHHHHHHHHhhcCCCCCCCeEe-cCCC-Ch
Q psy14115 28 NIFPIVQGGLDEALRKDCAHQMVEKDVN-GFAV--G------GLSGGEAKEDFWYSVLVSINCLPKDKPRYV-MGIG-FA 96 (319)
Q Consensus 28 ~lfgiVqGG~~~dlR~~s~~~l~~~~~~-G~aI--g------Gl~~ge~~~e~~~ii~~~~~~LP~dkPr~l-~Gvg-~P 96 (319)
.+++-| +|.+++.-.++++.+.+.+++ ++-| + +...+.+++.+.+++..+.+.. ++|..+ +..+ ++
T Consensus 130 pvivsI-~g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~~G~~~l~~~~e~l~~il~av~~~~--~~PV~vKi~p~~~~ 206 (345)
T 3oix_A 130 NHFLSL-VGMSPEETHTILXMVEASKYQGLVELNLSCPNVPGXPQIAYDFETTDQILSEVFTYF--TKPLGIKLPPYFDI 206 (345)
T ss_dssp CCEEEE-CCSSHHHHHHHHHHHHHSSCCSEEEEECSCCCSTTCCCGGGCHHHHHHHHHHHTTTC--CSCEEEEECCCCCH
T ss_pred CEEEEe-cCCCHHHHHHHHHHHhccCCCcEEEEecCCCCcCCchhhcCCHHHHHHHHHHHHHHh--CCCeEEEECCCCCH
Confidence 344444 568889899999999877766 5543 2 2233456788899999988876 478776 4443 56
Q ss_pred HHHHHHH-H---cCCcEeecC
Q psy14115 97 VDLLICC-A---LGADMFDCV 113 (319)
Q Consensus 97 ~~Il~~V-~---lGvD~FD~~ 113 (319)
.++...+ . .|+|++.++
T Consensus 207 ~~~a~~~~~aga~~i~~int~ 227 (345)
T 3oix_A 207 VHFDQAAAIFNXYPLTFVNCI 227 (345)
T ss_dssp HHHHHHHHHHTTSCCSEEEEC
T ss_pred HHHHHHHHHhCCCceEEEEee
Confidence 6666554 3 355555444
No 120
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=46.57 E-value=89 Score=28.43 Aligned_cols=104 Identities=11% Similarity=0.072 Sum_probs=66.6
Q ss_pred HHHHHHHhhcCCCCCceeeeccCCC-CHHHHHHHHHHHHhCCCceEEeCCCC-------------------CCCCHHHHH
Q psy14115 13 WLDRCLAAHRNPTTQNIFPIVQGGL-DEALRKDCAHQMVEKDVNGFAVGGLS-------------------GGEAKEDFW 72 (319)
Q Consensus 13 Wl~r~~~~~~~~~~q~lfgiVqGG~-~~dlR~~s~~~l~~~~~~G~aIgGl~-------------------~ge~~~e~~ 72 (319)
|+++.++..+..++..+.+-+..|. +.+.=.+.++.|.+.+++..-+|=.- .|.+.++..
T Consensus 6 ri~~~f~~~~~~~~~ali~yi~aGdP~~~~~~~~~~~l~~~GaD~iElGiPfSDP~aDGpvIq~a~~rAL~~G~~~~~~~ 85 (271)
T 3nav_A 6 RYQALFQRLSAAQQGAFVPFVTIGDPNPEQSLAIMQTLIDAGADALELGMPFSDPLADGPTIQGANLRALAAKTTPDICF 85 (271)
T ss_dssp HHHHHHHHHHHTTBCEEEEEEETTSSCHHHHHHHHHHHHHTTCSSEEEECCCCCGGGCCSHHHHHHHHHHHTTCCHHHHH
T ss_pred HHHHHHHHHHhcCCCeEEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEECCCCCCCCCCCHHHHHHHHHHHHcCCCHHHHH
Confidence 4555554433333456777777664 34555667888888899988888432 233445667
Q ss_pred HHHHHhhcCCCCCCCeEecCCCCh-------HHHHHHHHcCCcEe-ecCCccc
Q psy14115 73 YSVLVSINCLPKDKPRYVMGIGFA-------VDLLICCALGADMF-DCVFPTR 117 (319)
Q Consensus 73 ~ii~~~~~~LP~dkPr~l~Gvg~P-------~~Il~~V~lGvD~F-D~~~Ptr 117 (319)
+++..+++..+ +.|..+|+-.+| ..+-.|.+.|+|.+ -...|..
T Consensus 86 ~~v~~~r~~~~-~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIipDlp~e 137 (271)
T 3nav_A 86 ELIAQIRARNP-ETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLIADVPTN 137 (271)
T ss_dssp HHHHHHHHHCT-TSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEETTSCGG
T ss_pred HHHHHHHhcCC-CCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEECCCCHH
Confidence 78888776533 678999885444 23667889999974 4445554
No 121
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=46.56 E-value=51 Score=32.66 Aligned_cols=65 Identities=12% Similarity=0.072 Sum_probs=51.6
Q ss_pred HHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeec
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
-++.+.+.+++...|....+ ......++|+.+.+..| +.|..+-+++++++...++..|+|.+..
T Consensus 260 ra~aLveaGvd~I~Id~a~g--~~~~v~~~i~~i~~~~~-~~~vi~g~v~t~e~a~~~~~aGad~i~v 324 (511)
T 3usb_A 260 RIDALVKASVDAIVLDTAHG--HSQGVIDKVKEVRAKYP-SLNIIAGNVATAEATKALIEAGANVVKV 324 (511)
T ss_dssp HHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCT-TSEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhhccceEEeccccc--chhhhhhHHHHHHHhCC-CceEEeeeeccHHHHHHHHHhCCCEEEE
Confidence 36777888999999986532 34567788888888776 4677766889999999999999999973
No 122
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=46.32 E-value=50 Score=32.47 Aligned_cols=65 Identities=22% Similarity=0.220 Sum_probs=41.6
Q ss_pred HHHHHHhCCCceEEeCCCCCCCC-H-H-------HHHHHHHHhhcCCC-CCCCeEec-CCCChHHHHHHHHcCCcEe
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEA-K-E-------DFWYSVLVSINCLP-KDKPRYVM-GIGFAVDLLICCALGADMF 110 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~-~-~-------e~~~ii~~~~~~LP-~dkPr~l~-Gvg~P~~Il~~V~lGvD~F 110 (319)
.++.+.+.+++++.+|+ ..|.. . . --...+..+.+.+. .+.|...- |+.+|.+|..++++|+|.+
T Consensus 283 ~a~~l~~aGaD~I~vg~-g~Gs~~~t~~~~g~g~p~~~~l~~v~~~~~~~~iPVIa~GGI~~~~di~kal~~GAd~V 358 (490)
T 4avf_A 283 AAKALAEAGADAVKVGI-GPGSICTTRIVAGVGVPQISAIANVAAALEGTGVPLIADGGIRFSGDLAKAMVAGAYCV 358 (490)
T ss_dssp HHHHHHHTTCSEEEECS-SCSTTCHHHHHTCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEEEECC-CCCcCCCccccCCCCccHHHHHHHHHHHhccCCCcEEEeCCCCCHHHHHHHHHcCCCee
Confidence 46778889999999964 22211 0 0 01233333333221 25777765 7999999999999999964
No 123
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=46.16 E-value=1e+02 Score=28.23 Aligned_cols=74 Identities=12% Similarity=-0.122 Sum_probs=48.4
Q ss_pred HHHHHHHHHHHHhCCCceEEeCCCCC-------CCCHHHHHHHHHHhhcCC-------CCCCCeEe-cCCC-ChHH----
Q psy14115 39 EALRKDCAHQMVEKDVNGFAVGGLSG-------GEAKEDFWYSVLVSINCL-------PKDKPRYV-MGIG-FAVD---- 98 (319)
Q Consensus 39 ~dlR~~s~~~l~~~~~~G~aIgGl~~-------ge~~~e~~~ii~~~~~~L-------P~dkPr~l-~Gvg-~P~~---- 98 (319)
.+.-.++++.+.+ +++++.|--.++ +++.+..+++++.+.+.. +++.|..+ +..+ +.++
T Consensus 152 ~~~~~~aa~~~~~-g~d~iein~~sP~~~g~~~~~~~~~~~~il~~vr~~~~~~~~~~g~~~Pv~vKi~~~~~~~~~~~~ 230 (336)
T 1f76_A 152 KDDYLICMEKIYA-YAGYIAINISSPNTPGLRTLQYGEALDDLLTAIKNKQNDLQAMHHKYVPIAVKIAPDLSEEELIQV 230 (336)
T ss_dssp HHHHHHHHHHHGG-GCSEEEEECCCSSSTTGGGGGSHHHHHHHHHHHHHHHHHHHHHHTSCCCEEEECCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHhc-cCCEEEEEccCCCCCCcccccCHHHHHHHHHHHHHHHHhhhhcccccCceEEEecCCCCHHHHHHH
Confidence 5666677777665 889887754332 234455678888887766 34788776 3333 3334
Q ss_pred HHHHHHcCCcEeecC
Q psy14115 99 LLICCALGADMFDCV 113 (319)
Q Consensus 99 Il~~V~lGvD~FD~~ 113 (319)
.-.+.+.|+|.++.+
T Consensus 231 a~~l~~~Gvd~i~vs 245 (336)
T 1f76_A 231 ADSLVRHNIDGVIAT 245 (336)
T ss_dssp HHHHHHTTCSEEEEC
T ss_pred HHHHHHcCCcEEEEe
Confidence 346678999999876
No 124
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=45.77 E-value=71 Score=31.61 Aligned_cols=65 Identities=18% Similarity=0.251 Sum_probs=41.1
Q ss_pred HHHHHHHhCCCceEEeCCCCCCC------------CH-HHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcE
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGE------------AK-EDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADM 109 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge------------~~-~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~ 109 (319)
+.++.+.+.+++++.+|. ..|. +. ..+.++.+.+.+ . +.|...- |+.+|.+|..++++|+|.
T Consensus 309 e~a~~~~~aGad~i~vg~-g~gsi~~~~~~~g~g~p~~~~l~~v~~~~~~-~--~iPVIa~GGI~~~~di~kala~GA~~ 384 (511)
T 3usb_A 309 EATKALIEAGANVVKVGI-GPGSICTTRVVAGVGVPQLTAVYDCATEARK-H--GIPVIADGGIKYSGDMVKALAAGAHV 384 (511)
T ss_dssp HHHHHHHHHTCSEEEECS-SCSTTCCHHHHHCCCCCHHHHHHHHHHHHHT-T--TCCEEEESCCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCEEEECC-CCccccccccccCCCCCcHHHHHHHHHHHHh-C--CCcEEEeCCCCCHHHHHHHHHhCchh
Confidence 346667778999998843 2222 11 122233222222 1 4677764 899999999999999997
Q ss_pred eec
Q psy14115 110 FDC 112 (319)
Q Consensus 110 FD~ 112 (319)
+=.
T Consensus 385 V~v 387 (511)
T 3usb_A 385 VML 387 (511)
T ss_dssp EEE
T ss_pred hee
Confidence 543
No 125
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=45.72 E-value=37 Score=33.53 Aligned_cols=65 Identities=12% Similarity=0.077 Sum_probs=51.2
Q ss_pred HHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeec
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.++.+.+.+++.+.|....+ ......++|+.+.+..| +.|..+-++.++++...++..|+|.+..
T Consensus 235 ~a~~l~~aG~d~I~id~a~g--~~~~~~~~i~~ir~~~p-~~~Vi~g~v~t~e~a~~l~~aGaD~I~V 299 (496)
T 4fxs_A 235 RVKALVEAGVDVLLIDSSHG--HSEGVLQRIRETRAAYP-HLEIIGGNVATAEGARALIEAGVSAVKV 299 (496)
T ss_dssp HHHHHHHTTCSEEEEECSCT--TSHHHHHHHHHHHHHCT-TCCEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhccCceEEeccccc--cchHHHHHHHHHHHHCC-CceEEEcccCcHHHHHHHHHhCCCEEEE
Confidence 46667778999999886542 33566788888888876 6777775689999999999999999974
No 126
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=45.61 E-value=52 Score=30.17 Aligned_cols=75 Identities=17% Similarity=-0.022 Sum_probs=48.1
Q ss_pred CHHHHHHHHHHHHhCCCceEEeCCCCC--C----CCHHHHHH---HHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCc
Q psy14115 38 DEALRKDCAHQMVEKDVNGFAVGGLSG--G----EAKEDFWY---SVLVSINCLPKDKPRYVMGIGFAVDLLICCALGAD 108 (319)
Q Consensus 38 ~~dlR~~s~~~l~~~~~~G~aIgGl~~--g----e~~~e~~~---ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD 108 (319)
+.+.=.+-++++.+.|.+-+=|||-|. | ...+|+.+ +|+.+.+. +.|. ..-.-.|.-+-.+++.|+|
T Consensus 27 ~~~~a~~~a~~~v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~---~~pi-SIDT~~~~va~aAl~aGa~ 102 (280)
T 1eye_A 27 DLDDAVKHGLAMAAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQ---GITV-SIDTMRADVARAALQNGAQ 102 (280)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECC--------------HHHHHHHHHHHHHT---TCCE-EEECSCHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcC---CCEE-EEeCCCHHHHHHHHHcCCC
Confidence 345555567888999999999999663 2 11344444 45554432 4444 3355789999999999999
Q ss_pred EeecCCcc
Q psy14115 109 MFDCVFPT 116 (319)
Q Consensus 109 ~FD~~~Pt 116 (319)
++-.+.-.
T Consensus 103 iINdvsg~ 110 (280)
T 1eye_A 103 MVNDVSGG 110 (280)
T ss_dssp EEEETTTT
T ss_pred EEEECCCC
Confidence 99776543
No 127
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=45.46 E-value=54 Score=30.67 Aligned_cols=83 Identities=10% Similarity=-0.049 Sum_probs=56.5
Q ss_pred eeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCC-------------CCCHHHHHHHHHHhhcCCCCCCCeEe---cC
Q psy14115 29 IFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSG-------------GEAKEDFWYSVLVSINCLPKDKPRYV---MG 92 (319)
Q Consensus 29 lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~-------------ge~~~e~~~ii~~~~~~LP~dkPr~l---~G 92 (319)
.+++-.+|.+++.-.++++.+.+.+++++-|..-++ ....+...++|+.+.+.+ +.|..+ +|
T Consensus 59 p~~vQL~g~~p~~~~~aA~~a~~~G~D~IeIn~gcP~~~~~~d~~G~~l~~~~~~~~eiv~av~~~v--~~PV~vKiR~g 136 (350)
T 3b0p_A 59 PIALQLAGSDPKSLAEAARIGEAFGYDEINLNLGCPSEKAQEGGYGACLLLDLARVREILKAMGEAV--RVPVTVKMRLG 136 (350)
T ss_dssp SEEEEEECSCHHHHHHHHHHHHHTTCSEEEEEECCCSHHHHHTTCGGGGGGCHHHHHHHHHHHHHHC--SSCEEEEEESC
T ss_pred eEEEEeCCCCHHHHHHHHHHHHHcCCCEEEECCcCCCCcCcCCCcchhHHhCHHHHHHHHHHHHHHh--CCceEEEEecC
Confidence 444555567888888899999889999998864221 123556677888887765 467666 56
Q ss_pred CCC------hHHH-HHHHHcCCcEeecC
Q psy14115 93 IGF------AVDL-LICCALGADMFDCV 113 (319)
Q Consensus 93 vg~------P~~I-l~~V~lGvD~FD~~ 113 (319)
... ..++ -.+.+.|+|.+...
T Consensus 137 ~~~~~~~~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 137 LEGKETYRGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp BTTCCCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred cCccccHHHHHHHHHHHHHcCCCEEEEe
Confidence 532 2333 35668999999864
No 128
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=45.10 E-value=68 Score=29.23 Aligned_cols=71 Identities=11% Similarity=0.013 Sum_probs=44.7
Q ss_pred CHHHHHHHHHHHHhCCCceEEeCCCC-CCCC---HHHHHHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 38 DEALRKDCAHQMVEKDVNGFAVGGLS-GGEA---KEDFWYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 38 ~~dlR~~s~~~l~~~~~~G~aIgGl~-~ge~---~~e~~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.++.|.+.+.+.. .+| -|.+...+ .|.. ..+..+.++.+.+.. +.|..+ +|+.+|+++-.++..|+|.+-.
T Consensus 161 t~~eri~~i~~~~-~gf-iY~vs~~GvTG~~~~~~~~~~~~v~~vr~~~--~~Pv~vGfGIst~e~~~~~~~~gADgvIV 236 (271)
T 3nav_A 161 ASDETLRAVAQLG-KGY-TYLLSRAGVTGAETKANMPVHALLERLQQFD--APPALLGFGISEPAQVKQAIEAGAAGAIS 236 (271)
T ss_dssp CCHHHHHHHHHHC-CSC-EEECCCC--------CCHHHHHHHHHHHHTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred CCHHHHHHHHHHC-CCe-EEEEeccCCCCcccCCchhHHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 3345666655542 344 34332221 1221 345677777777765 589988 8899999998899999997644
No 129
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=44.89 E-value=60 Score=30.08 Aligned_cols=78 Identities=18% Similarity=-0.079 Sum_probs=51.9
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCC-----CCHHHHHHHHHHhhcCCCCCCCeEecC-CCChHHHHHHHHcC
Q psy14115 33 VQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGG-----EAKEDFWYSVLVSINCLPKDKPRYVMG-IGFAVDLLICCALG 106 (319)
Q Consensus 33 VqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~g-----e~~~e~~~ii~~~~~~LP~dkPr~l~G-vg~P~~Il~~V~lG 106 (319)
..||.+.+.-.+-++.+.+.+++.+.+.+-... ..+...++.+..+.+.+ +.|...-| +-+|++...+++.|
T Consensus 222 ~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~s~~~a~~~l~~G 299 (338)
T 1z41_A 222 TDKGLDIADHIGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQA--DMATGAVGMITDGSMAEEILQNG 299 (338)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCSHHHHHHHHHTT
T ss_pred CCCCCCHHHHHHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHC--CCCEEEECCCCCHHHHHHHHHcC
Confidence 356788877777888898999999988653210 01111234444444433 46777654 67899999999999
Q ss_pred -CcEeec
Q psy14115 107 -ADMFDC 112 (319)
Q Consensus 107 -vD~FD~ 112 (319)
+|++=.
T Consensus 300 ~aD~V~i 306 (338)
T 1z41_A 300 RADLIFI 306 (338)
T ss_dssp SCSEEEE
T ss_pred CceEEee
Confidence 998743
No 130
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=44.21 E-value=57 Score=32.08 Aligned_cols=72 Identities=15% Similarity=0.153 Sum_probs=43.5
Q ss_pred HHHHHHHHhCCCceEEeCCCCCC------------CCH-HHHHHHHHHhhcC---CCCCCCeEec-CCCChHHHHHHHHc
Q psy14115 43 KDCAHQMVEKDVNGFAVGGLSGG------------EAK-EDFWYSVLVSINC---LPKDKPRYVM-GIGFAVDLLICCAL 105 (319)
Q Consensus 43 ~~s~~~l~~~~~~G~aIgGl~~g------------e~~-~e~~~ii~~~~~~---LP~dkPr~l~-Gvg~P~~Il~~V~l 105 (319)
.+.++.+.+.++++..+ |.++| .+. .-+.++.+.+... ...+.|.+.- |+.+|.+|..|+++
T Consensus 295 ~~~a~~l~~aGad~I~V-g~~~g~~~~~r~~~~~g~p~~~~l~~v~~~~~~~~~~~~~~ipvia~GGi~~~~di~kAlal 373 (503)
T 1me8_A 295 GEGFRYLADAGADFIKI-GIGGGSICITREQKGIGRGQATAVIDVVAERNKYFEETGIYIPVCSDGGIVYDYHMTLALAM 373 (503)
T ss_dssp HHHHHHHHHHTCSEEEE-CSSCSTTCCSTTTTCCCCCHHHHHHHHHHHHHHHHHHHSEECCEEEESCCCSHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCeEEe-cccCCcCcccccccCCCCchHHHHHHHHHHHHHHhhhcCCCceEEEeCCCCCHHHHHHHHHc
Confidence 44666777889999988 66443 121 2223333333221 0013455543 79999999999999
Q ss_pred CCcEeecCCc
Q psy14115 106 GADMFDCVFP 115 (319)
Q Consensus 106 GvD~FD~~~P 115 (319)
|+|.+=.--|
T Consensus 374 GA~~V~iG~~ 383 (503)
T 1me8_A 374 GADFIMLGRY 383 (503)
T ss_dssp TCSEEEESHH
T ss_pred CCCEEEECch
Confidence 9997644333
No 131
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=44.17 E-value=59 Score=29.55 Aligned_cols=42 Identities=14% Similarity=0.011 Sum_probs=33.3
Q ss_pred HHHHHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 69 EDFWYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 69 ~e~~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.+..+.|+.+.+.. +.|..+ +|+.+|+++-.++..|+|.+-.
T Consensus 192 ~~~~~~v~~vr~~~--~~pv~vGfGI~~~e~~~~~~~~gADgvVV 234 (267)
T 3vnd_A 192 EPIENILTQLAEFN--APPPLLGFGIAEPEQVRAAIKAGAAGAIS 234 (267)
T ss_dssp -CHHHHHHHHHTTT--CCCEEECSSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHHHHhc--CCCEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 44677777777764 588887 7888999999899999998754
No 132
>3tsm_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, ssgcid, seattle structural GE center for infectious disease, lyase; 2.15A {Brucella melitensis} SCOP: c.1.2.0
Probab=44.05 E-value=29 Score=31.78 Aligned_cols=58 Identities=16% Similarity=-0.083 Sum_probs=37.8
Q ss_pred hCCCceEEeCCCC--CC-CCHHHHHHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 51 EKDVNGFAVGGLS--GG-EAKEDFWYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 51 ~~~~~G~aIgGl~--~g-e~~~e~~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.+++-+.+..-. .. -+.+...+ ..+.+|.+.|... .|+.+|+++..+..+|+|-|=.
T Consensus 187 ~~ga~iIGinnr~l~t~~~dl~~~~~----L~~~ip~~~~vIaesGI~t~edv~~l~~~Ga~gvLV 248 (272)
T 3tsm_A 187 KLSSRLLGVNNRNLRSFEVNLAVSER----LAKMAPSDRLLVGESGIFTHEDCLRLEKSGIGTFLI 248 (272)
T ss_dssp TSCCSEEEEECBCTTTCCBCTHHHHH----HHHHSCTTSEEEEESSCCSHHHHHHHHTTTCCEEEE
T ss_pred hcCCCEEEECCCCCccCCCChHHHHH----HHHhCCCCCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 4566666555422 11 12233333 3445788888775 6899999999999999998743
No 133
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=43.93 E-value=66 Score=27.31 Aligned_cols=69 Identities=20% Similarity=0.197 Sum_probs=48.6
Q ss_pred HHHHHHHhCCCceEEeCCCCCC-CCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecCC
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGG-EAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCVF 114 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~g-e~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~~ 114 (319)
+.++.+.+.+++.+.+-..... .......+.+..+.+.. +.|..+. |+.+|.++..+++.|+|.+....
T Consensus 37 ~~a~~~~~~G~d~i~v~~~~~~~~~~~~~~~~i~~i~~~~--~ipvi~~g~i~~~~~~~~~~~~Gad~V~i~~ 107 (253)
T 1h5y_A 37 EMAVRYEEEGADEIAILDITAAPEGRATFIDSVKRVAEAV--SIPVLVGGGVRSLEDATTLFRAGADKVSVNT 107 (253)
T ss_dssp HHHHHHHHTTCSCEEEEECCCCTTTHHHHHHHHHHHHHHC--SSCEEEESSCCSHHHHHHHHHHTCSEEEESH
T ss_pred HHHHHHHHcCCCEEEEEeCCccccCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCCEEEECh
Confidence 4566777788998887655332 23334566677666654 4777765 57899999999999999987543
No 134
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=43.58 E-value=70 Score=30.32 Aligned_cols=64 Identities=19% Similarity=0.206 Sum_probs=41.2
Q ss_pred HHHHHHhCCCceEEeCCCCC-----CCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecC
Q psy14115 45 CAHQMVEKDVNGFAVGGLSG-----GEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~-----ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
-++.+.+.+++++.++|-.+ +.+. ++.+..+.+.++ .|.+.. |+.++.|+..++++|+|.+-.-
T Consensus 238 ~a~~a~~aGad~I~vs~~gg~~~d~~~~~---~~~l~~v~~~~~--~pVia~GGI~~~~dv~kal~~GAdaV~iG 307 (380)
T 1p4c_A 238 DADRCIAEGADGVILSNHGGRQLDCAISP---MEVLAQSVAKTG--KPVLIDSGFRRGSDIVKALALGAEAVLLG 307 (380)
T ss_dssp HHHHHHHTTCSEEEECCGGGTSCTTCCCG---GGTHHHHHHHHC--SCEEECSSCCSHHHHHHHHHTTCSCEEES
T ss_pred HHHHHHHcCCCEEEEcCCCCCcCCCCcCH---HHHHHHHHHHcC--CeEEEECCCCCHHHHHHHHHhCCcHhheh
Confidence 45666678999999965321 1221 223333333333 278876 6899999999999999976443
No 135
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=43.30 E-value=1e+02 Score=29.04 Aligned_cols=83 Identities=7% Similarity=0.021 Sum_probs=52.6
Q ss_pred ceeeeccCCCCHHHHHHHHHHHH---hCCCceEEe--C------CCCCCCCHHHHHHHHHHhhcCCCCCCCeEe-cCCC-
Q psy14115 28 NIFPIVQGGLDEALRKDCAHQMV---EKDVNGFAV--G------GLSGGEAKEDFWYSVLVSINCLPKDKPRYV-MGIG- 94 (319)
Q Consensus 28 ~lfgiVqGG~~~dlR~~s~~~l~---~~~~~G~aI--g------Gl~~ge~~~e~~~ii~~~~~~LP~dkPr~l-~Gvg- 94 (319)
.+++-| .|.+++.-.++++.+. +.+++++-| + |...+.+++.+.+++..+.+.. ++|..+ +..+
T Consensus 128 pvivsI-~G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~~gg~~l~~~~e~~~~il~av~~~~--~~PV~vKi~p~~ 204 (354)
T 4ef8_A 128 PLFLSM-SGLSMRENVEMCKRLAAVATEKGVILELNLSCPNVPGKPQVAYDFDAMRQCLTAVSEVY--PHSFGVKMPPYF 204 (354)
T ss_dssp CEEEEE-CCSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCSTTSCCGGGSHHHHHHHHHHHHHHC--CSCEEEEECCCC
T ss_pred cEEEEe-ccCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCCCCchhhccCHHHHHHHHHHHHHhh--CCCeEEEecCCC
Confidence 344444 4578888888888887 344555553 2 3333456788888998888765 478776 3333
Q ss_pred ChHHHHHHH----HcC-CcEeecC
Q psy14115 95 FAVDLLICC----ALG-ADMFDCV 113 (319)
Q Consensus 95 ~P~~Il~~V----~lG-vD~FD~~ 113 (319)
++.++..++ +.| +|.+-..
T Consensus 205 d~~~~~~~a~~~~~~Gg~d~I~~~ 228 (354)
T 4ef8_A 205 DFAHFDAAAEILNEFPKVQFITCI 228 (354)
T ss_dssp SHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred CHHHHHHHHHHHHhCCCccEEEEe
Confidence 566665544 566 8877543
No 136
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=43.30 E-value=1e+02 Score=26.61 Aligned_cols=61 Identities=16% Similarity=0.111 Sum_probs=39.2
Q ss_pred HHHHHhCCCceEEeCCCC-----CCCCHHHHHHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 46 AHQMVEKDVNGFAVGGLS-----GGEAKEDFWYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 46 ~~~l~~~~~~G~aIgGl~-----~ge~~~e~~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
++.+.+.+++++.+-+.. .|.+ ++.+..+.+.+ +.|... -|+.+|+++..+.+.|+|-+=.
T Consensus 158 ~~~~~~~G~~~i~~~~~~~~g~~~g~~----~~~i~~l~~~~--~ipvia~GGI~~~~d~~~~~~~Gadgv~v 224 (252)
T 1ka9_F 158 AVKGVELGAGEILLTSMDRDGTKEGYD----LRLTRMVAEAV--GVPVIASGGAGRMEHFLEAFQAGAEAALA 224 (252)
T ss_dssp HHHHHHHTCCEEEEEETTTTTTCSCCC----HHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEEecccCCCCcCCCC----HHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHCCCHHHHH
Confidence 444555688888765432 2222 33344444333 467876 5799999999999999996643
No 137
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=43.23 E-value=60 Score=30.48 Aligned_cols=87 Identities=23% Similarity=0.305 Sum_probs=53.5
Q ss_pred Cceeeecc--------CCCC--HHHHHHHHHHHHhCCCceEEeCCCCC--C--C-CHHHHHHH---HHHhhcCCCCCCCe
Q psy14115 27 QNIFPIVQ--------GGLD--EALRKDCAHQMVEKDVNGFAVGGLSG--G--E-AKEDFWYS---VLVSINCLPKDKPR 88 (319)
Q Consensus 27 q~lfgiVq--------GG~~--~dlR~~s~~~l~~~~~~G~aIgGl~~--g--e-~~~e~~~i---i~~~~~~LP~dkPr 88 (319)
..++||+- ||.+ .+.=.+-++++.+.|.+-+=|||-|. | - ..+|+.++ |+.+.+..| +.|.
T Consensus 42 ~~vMGIlNvTPDSFsdgg~~~~~~~a~~~A~~~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~-~vpI 120 (318)
T 2vp8_A 42 ALIMAIVNRTPDSFYDKGATFSDAAARDAVHRAVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYP-DQLI 120 (318)
T ss_dssp CEEEEEEC--------------CHHHHHHHHHHHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHST-TCEE
T ss_pred cEEEEEEeCCCCcccCCCccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCC-CCeE
Confidence 45777773 4433 33445567888899999999999752 3 1 14566555 566565443 3443
Q ss_pred EecCCCChHHHHHHHHcCCcEeecCCc
Q psy14115 89 YVMGIGFAVDLLICCALGADMFDCVFP 115 (319)
Q Consensus 89 ~l~Gvg~P~~Il~~V~lGvD~FD~~~P 115 (319)
..-.-.|.-+-.+++.|+|++-++.-
T Consensus 121 -SIDT~~~~VaeaAl~aGa~iINDVsg 146 (318)
T 2vp8_A 121 -SVDTWRAQVAKAACAAGADLINDTWG 146 (318)
T ss_dssp -EEECSCHHHHHHHHHHTCCEEEETTS
T ss_pred -EEeCCCHHHHHHHHHhCCCEEEECCC
Confidence 33557899999999999999877654
No 138
>3tdn_A FLR symmetric alpha-beta TIM barrel; symmetric superfold, de novo protein; 1.40A {Synthetic construct} PDB: 3og3_A 3tdm_A
Probab=42.80 E-value=52 Score=28.70 Aligned_cols=67 Identities=13% Similarity=0.090 Sum_probs=46.5
Q ss_pred HHHHHHHHhCCCceEEeCCCCC-CCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEee
Q psy14115 43 KDCAHQMVEKDVNGFAVGGLSG-GEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFD 111 (319)
Q Consensus 43 ~~s~~~l~~~~~~G~aIgGl~~-ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD 111 (319)
.+.++.+.+.+++.+.+-++.. +.......+.+..+.+.. +.|..+- |+.+|.++..+.+.|+|.+-
T Consensus 38 ~~~a~~~~~~G~~~i~v~d~~~~~~~~~~~~~~i~~i~~~~--~ipvi~~Ggi~~~~~~~~~l~~Gad~V~ 106 (247)
T 3tdn_A 38 RDWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLRGADKVS 106 (247)
T ss_dssp HHHHHHHHHTTCSEEEEEETTTTTCSSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHTTCSEEC
T ss_pred HHHHHHHHHcCCCEEEEEecCcccCCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCeee
Confidence 4567777888988887765532 111122345666666655 4788876 68999999999999999863
No 139
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=41.51 E-value=60 Score=29.79 Aligned_cols=78 Identities=17% Similarity=0.133 Sum_probs=51.8
Q ss_pred CCCC--HHHHHHHHHHHHhCCCceEEeCCCCC--CC----CHHHH---HHHHHHhhcCCCCCCCeEecCCCChHHHHHHH
Q psy14115 35 GGLD--EALRKDCAHQMVEKDVNGFAVGGLSG--GE----AKEDF---WYSVLVSINCLPKDKPRYVMGIGFAVDLLICC 103 (319)
Q Consensus 35 GG~~--~dlR~~s~~~l~~~~~~G~aIgGl~~--ge----~~~e~---~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V 103 (319)
||.+ .+.=.+-++++.+.|.+-+=|||-|. |- ..+|+ ..+|+.+.+.. +.|. ..-.-.|.-+-.++
T Consensus 31 gg~~~~~~~a~~~a~~~v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~--~~pi-SIDT~~~~va~aAl 107 (282)
T 1aj0_A 31 GGTHNSLIDAVKHANLMINAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRF--EVWI-SVDTSKPEVIRESA 107 (282)
T ss_dssp CCCCTHHHHHHHHHHHHHHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHC--CCEE-EEECCCHHHHHHHH
T ss_pred ccccCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhc--CCeE-EEeCCCHHHHHHHH
Confidence 4544 34444567888889999999999664 31 13444 44555555432 3443 33557899999999
Q ss_pred HcCCcEeecCCc
Q psy14115 104 ALGADMFDCVFP 115 (319)
Q Consensus 104 ~lGvD~FD~~~P 115 (319)
+.|+|++-++..
T Consensus 108 ~aGa~iINdvsg 119 (282)
T 1aj0_A 108 KVGAHIINDIRS 119 (282)
T ss_dssp HTTCCEEEETTT
T ss_pred HcCCCEEEECCC
Confidence 999999976654
No 140
>1geq_A Tryptophan synthase alpha-subunit; hyperthermophIle, pyrococ furiosus, X-RAY analysis, stability, calorimetry, lyase; 2.00A {Pyrococcus furiosus} SCOP: c.1.2.4 PDB: 1wdw_A* 2dzu_A 2dzp_A 2e09_A 2dzw_A 2dzs_A 2dzv_A 2dzt_A 2dzx_A
Probab=41.38 E-value=52 Score=28.53 Aligned_cols=82 Identities=15% Similarity=0.065 Sum_probs=55.2
Q ss_pred ceeeeccCCCCH-HHHHHHHHHHHhCCCceEEeC------CCC-------------CCCCHHHHHHHHHHhhcCCCCCCC
Q psy14115 28 NIFPIVQGGLDE-ALRKDCAHQMVEKDVNGFAVG------GLS-------------GGEAKEDFWYSVLVSINCLPKDKP 87 (319)
Q Consensus 28 ~lfgiVqGG~~~-dlR~~s~~~l~~~~~~G~aIg------Gl~-------------~ge~~~e~~~ii~~~~~~LP~dkP 87 (319)
.+.+.+..|... +.-.+.++.+.+. ++.+=++ .+. .|.+.....++++.+++.. +.|
T Consensus 6 ~~~~~i~~~~~~~~~~~~~a~~~~~~-ad~iel~~p~sdp~~DG~~~~~~~~~al~~g~~~~~~~~~i~~i~~~~--~~p 82 (248)
T 1geq_A 6 SLIPYLTAGDPDKQSTLNFLLALDEY-AGAIELGIPFSDPIADGKTIQESHYRALKNGFKLREAFWIVKEFRRHS--STP 82 (248)
T ss_dssp EEEEEEETTSSCHHHHHHHHHHHGGG-BSCEEEECCCSCCTTSCHHHHHHHHHHHHTTCCHHHHHHHHHHHHTTC--CCC
T ss_pred cEEEEEeCCCCCHHHHHHHHHHHHHc-CCEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHhhC--CCC
Confidence 466667665442 4455667777777 8888777 221 1224455678888888774 578
Q ss_pred eEecCCCCh-------HHHHHHHHcCCcEeec
Q psy14115 88 RYVMGIGFA-------VDLLICCALGADMFDC 112 (319)
Q Consensus 88 r~l~Gvg~P-------~~Il~~V~lGvD~FD~ 112 (319)
.++|+.-+| ..+-.+.+.|+|.+-.
T Consensus 83 v~~~~~~~~~~~~~~~~~~~~~~~~Gad~v~~ 114 (248)
T 1geq_A 83 IVLMTYYNPIYRAGVRNFLAEAKASGVDGILV 114 (248)
T ss_dssp EEEEECHHHHHHHCHHHHHHHHHHHTCCEEEE
T ss_pred EEEEeccchhhhcCHHHHHHHHHHCCCCEEEE
Confidence 888875466 5677888999997654
No 141
>1h5y_A HISF; histidine biosynthesis, TIM-barrel; 2.0A {Pyrobaculum aerophilum} SCOP: c.1.2.1
Probab=40.92 E-value=82 Score=26.71 Aligned_cols=62 Identities=18% Similarity=0.149 Sum_probs=40.0
Q ss_pred HHHHHHhCCCceEEeCCCCC-----CCCHHHHHHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 45 CAHQMVEKDVNGFAVGGLSG-----GEAKEDFWYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~-----ge~~~e~~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.++.+.+.+++.+.+.+... +.+.+.+.++ .+.. +.|... -|+.+|.++..+.+.|+|.+-.
T Consensus 159 ~~~~~~~~G~d~i~~~~~~~~g~~~~~~~~~i~~l----~~~~--~~pvia~GGi~~~~~~~~~~~~Ga~~v~v 226 (253)
T 1h5y_A 159 WAKEVEELGAGEILLTSIDRDGTGLGYDVELIRRV----ADSV--RIPVIASGGAGRVEHFYEAAAAGADAVLA 226 (253)
T ss_dssp HHHHHHHHTCSEEEEEETTTTTTCSCCCHHHHHHH----HHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHhCCCCEEEEecccCCCCcCcCCHHHHHHH----HHhc--CCCEEEeCCCCCHHHHHHHHHcCCcHHHH
Confidence 35566667888887755432 2223333333 3322 567776 4789999999999999997644
No 142
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=39.64 E-value=50 Score=31.43 Aligned_cols=65 Identities=12% Similarity=0.071 Sum_probs=46.9
Q ss_pred HHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeec
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
-++.+.+.+++.+.|... .| ..+...+.|+.+.+..| +.|...-.+.++++...++..|+|.+..
T Consensus 112 ~~~~lieaGvd~I~idta-~G-~~~~~~~~I~~ik~~~p-~v~Vi~G~v~t~e~A~~a~~aGAD~I~v 176 (366)
T 4fo4_A 112 RVKALVEAGVDVLLIDSS-HG-HSEGVLQRIRETRAAYP-HLEIIGGNVATAEGARALIEAGVSAVKV 176 (366)
T ss_dssp HHHHHHHTTCSEEEEECS-CT-TSHHHHHHHHHHHHHCT-TCEEEEEEECSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHhCCCCEEEEeCC-CC-CCHHHHHHHHHHHHhcC-CCceEeeeeCCHHHHHHHHHcCCCEEEE
Confidence 466777788998887432 12 33566777888877776 4544432379999999999999999887
No 143
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=39.09 E-value=80 Score=31.11 Aligned_cols=64 Identities=23% Similarity=0.213 Sum_probs=41.1
Q ss_pred HHHHHHHhCCCceEEeCCCCCC-----------CC-HHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEe
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGG-----------EA-KEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMF 110 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~g-----------e~-~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~F 110 (319)
+.++.+.+.+++++.+|+-.++ .+ ...+.++.+.+.+ .+.|...- |+.+|.+|..++++|+|.+
T Consensus 284 e~a~~l~~aGaD~I~Vg~g~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~---~~iPVIa~GGI~~~~di~kala~GAd~V 360 (496)
T 4fxs_A 284 EGARALIEAGVSAVKVGIGPGSICTTRIVTGVGVPQITAIADAAGVANE---YGIPVIADGGIRFSGDISKAIAAGASCV 360 (496)
T ss_dssp HHHHHHHHHTCSEEEECSSCCTTBCHHHHHCCCCCHHHHHHHHHHHHGG---GTCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHHhCCCEEEECCCCCcCcccccccCCCccHHHHHHHHHHHhcc---CCCeEEEeCCCCCHHHHHHHHHcCCCeE
Confidence 3467777889999998732211 11 1222333333222 24677765 7999999999999999964
No 144
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=38.96 E-value=1e+02 Score=28.91 Aligned_cols=69 Identities=12% Similarity=-0.000 Sum_probs=41.9
Q ss_pred HHHHHHHhCCCceEEeCCCCCC--C----------CH-HHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcE
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGG--E----------AK-EDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADM 109 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~g--e----------~~-~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~ 109 (319)
+-++.+.+.+++++.++. ++| + +. .-+.++.+.+.. .+.|.+.- |+.+|.||..++++|+|.
T Consensus 173 e~A~~a~~aGaD~I~v~~-g~G~~~~~r~~~g~~~p~~~~l~~v~~~~~~---~~ipvIa~GGI~~g~di~kAlalGA~~ 248 (351)
T 2c6q_A 173 EMVEELILSGADIIKVGI-GPGSVCTTRKKTGVGYPQLSAVMECADAAHG---LKGHIISDGGCSCPGDVAKAFGAGADF 248 (351)
T ss_dssp HHHHHHHHTTCSEEEECS-SCSTTBCHHHHHCBCCCHHHHHHHHHHHHHH---TTCEEEEESCCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHhCCCEEEECC-CCCcCcCccccCCCCccHHHHHHHHHHHHhh---cCCcEEEeCCCCCHHHHHHHHHcCCCc
Confidence 356667788999998853 221 1 11 122333332221 13555554 799999999999999998
Q ss_pred eecCCcc
Q psy14115 110 FDCVFPT 116 (319)
Q Consensus 110 FD~~~Pt 116 (319)
+=.--|.
T Consensus 249 V~vG~~f 255 (351)
T 2c6q_A 249 VMLGGML 255 (351)
T ss_dssp EEESTTT
T ss_pred eeccHHH
Confidence 7544333
No 145
>1rd5_A Tryptophan synthase alpha chain, chloroplast; hydroxamic acid, diboa, dimboa, indole, indole-glycerol-PHOS lyase; 2.02A {Zea mays} SCOP: c.1.2.4 PDB: 1tjr_A
Probab=38.93 E-value=69 Score=28.24 Aligned_cols=41 Identities=20% Similarity=0.080 Sum_probs=30.4
Q ss_pred HHHHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 70 DFWYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 70 e~~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
...+.+..+.+.. +.|..+ .|+.+|+++..+.+.|+|.+-.
T Consensus 188 ~~~~~i~~v~~~~--~~pI~vgGGI~~~e~~~~~~~~GAdgvvV 229 (262)
T 1rd5_A 188 RVESLIQEVKKVT--NKPVAVGFGISKPEHVKQIAQWGADGVII 229 (262)
T ss_dssp HHHHHHHHHHHHC--SSCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred hHHHHHHHHHhhc--CCeEEEECCcCCHHHHHHHHHcCCCEEEE
Confidence 3445555555543 467776 6899999999999999998763
No 146
>1xi3_A Thiamine phosphate pyrophosphorylase; structural genomics, southeast collaboratory for structural genomics, hyperthermophIle; 1.70A {Pyrococcus furiosus} SCOP: c.1.3.1
Probab=38.80 E-value=46 Score=27.89 Aligned_cols=63 Identities=11% Similarity=0.075 Sum_probs=38.8
Q ss_pred HHhCCCceEEeCCCCCCCC----HHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecCC
Q psy14115 49 MVEKDVNGFAVGGLSGGEA----KEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCVF 114 (319)
Q Consensus 49 l~~~~~~G~aIgGl~~ge~----~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~~ 114 (319)
..+.+++.+.+++...+.. ...-++.+..+.+.+ +.|.++. |+. |.++..+.+.|+|.++...
T Consensus 124 ~~~~g~d~i~~~~~~~~~~~~~~~~~~~~~l~~l~~~~--~~pvia~GGI~-~~nv~~~~~~Ga~gv~vgs 191 (215)
T 1xi3_A 124 AEKKGADYLGAGSVFPTKTKEDARVIGLEGLRKIVESV--KIPVVAIGGIN-KDNAREVLKTGVDGIAVIS 191 (215)
T ss_dssp HHHHTCSEEEEECSSCC----CCCCCHHHHHHHHHHHC--SSCEEEESSCC-TTTHHHHHTTTCSEEEESH
T ss_pred HHhcCCCEEEEcCCccCCCCCCCCCcCHHHHHHHHHhC--CCCEEEECCcC-HHHHHHHHHcCCCEEEEhH
Confidence 3456788888765321100 111233444444333 5788876 566 9999999999999998754
No 147
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=38.37 E-value=59 Score=28.65 Aligned_cols=62 Identities=6% Similarity=-0.056 Sum_probs=43.9
Q ss_pred HHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEee
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFD 111 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD 111 (319)
-++++.+.+++..+++... ..+++...++++.+.+. +. ..+..+.++++...+.++|+|++-
T Consensus 93 ~i~~~~~aGad~I~l~~~~-~~~p~~l~~~i~~~~~~---g~-~v~~~v~t~eea~~a~~~Gad~Ig 154 (229)
T 3q58_A 93 DVDALAQAGADIIAFDASF-RSRPVDIDSLLTRIRLH---GL-LAMADCSTVNEGISCHQKGIEFIG 154 (229)
T ss_dssp HHHHHHHHTCSEEEEECCS-SCCSSCHHHHHHHHHHT---TC-EEEEECSSHHHHHHHHHTTCSEEE
T ss_pred HHHHHHHcCCCEEEECccc-cCChHHHHHHHHHHHHC---CC-EEEEecCCHHHHHHHHhCCCCEEE
Confidence 3666778899999887643 23345556666665543 23 344578999999999999999985
No 148
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=37.50 E-value=75 Score=29.37 Aligned_cols=88 Identities=18% Similarity=0.235 Sum_probs=54.7
Q ss_pred Cceeeecc--------CCC--CHHHHHHHHHHHHhCCCceEEeCCCCC--C----CCHHHHHHHHHHhhcCCCCCCCeEe
Q psy14115 27 QNIFPIVQ--------GGL--DEALRKDCAHQMVEKDVNGFAVGGLSG--G----EAKEDFWYSVLVSINCLPKDKPRYV 90 (319)
Q Consensus 27 q~lfgiVq--------GG~--~~dlR~~s~~~l~~~~~~G~aIgGl~~--g----e~~~e~~~ii~~~~~~LP~dkPr~l 90 (319)
..++||+- ||. +.+.=.+-++++.+.|.+-+=|||-|. | ...+|+.+++..+......+.|. .
T Consensus 23 ~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~vpi-S 101 (294)
T 2y5s_A 23 PLVMGILNATPDSFSDGGRFLARDDALRRAERMIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNVPL-S 101 (294)
T ss_dssp CEEEEEEECCC----------CTTHHHHHHHHHHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCSCE-E
T ss_pred ceEEEEEeCCCCCCCCCCCcCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCCeE-E
Confidence 45666662 443 234445567888899999999999763 3 12456655544332221124443 3
Q ss_pred cCCCChHHHHHHHHcCCcEeecCCc
Q psy14115 91 MGIGFAVDLLICCALGADMFDCVFP 115 (319)
Q Consensus 91 ~Gvg~P~~Il~~V~lGvD~FD~~~P 115 (319)
.-.-.|.-+-.+++.|+|++-++.-
T Consensus 102 IDT~~~~Va~aAl~aGa~iINdVsg 126 (294)
T 2y5s_A 102 IDTYKPAVMRAALAAGADLINDIWG 126 (294)
T ss_dssp EECCCHHHHHHHHHHTCSEEEETTT
T ss_pred EECCCHHHHHHHHHcCCCEEEECCC
Confidence 3557899999999999999976654
No 149
>2hl7_A Cytochrome C-type biogenesis protein CCMH; three-helices bundle, oxidoreductase; HET: PG4; 1.70A {Pseudomonas aeruginosa}
Probab=37.14 E-value=20 Score=27.42 Aligned_cols=47 Identities=19% Similarity=0.368 Sum_probs=32.9
Q ss_pred CCcccCcCCHHHHhhhhcCChhHhhHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHhCC
Q psy14115 150 PCSTCARYTRAYLHHIATVEPSACHLLSVHNIAFQMRLMREIRESIKEQRFPQYVKQYMKDAYP 213 (319)
Q Consensus 150 ~C~tC~~~tRAYLhHLl~~E~la~~LLtiHNl~~~~~l~~~iR~aI~~g~f~~~v~~f~~~~~~ 213 (319)
-|+.|++-|=+. ++-. .-..+=..||+.|++|.=++-+.+|+...|+
T Consensus 28 RCp~Cqnqsi~d-----Sna~------------iA~dlR~~V~~~l~~G~sd~eI~~~~v~RYG 74 (84)
T 2hl7_A 28 RCPKCQNQDIAD-----SNAP------------IAADLRKQIYGQLQQGKSDGEIVDYMVARYG 74 (84)
T ss_dssp ECTTSSSCBTTT-----CCSH------------HHHHHHHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred cCCCCCCCchhh-----cCcH------------HHHHHHHHHHHHHHcCCCHHHHHHHHHHhcC
Confidence 488999854321 3322 2334556899999999988888888877665
No 150
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=37.01 E-value=1e+02 Score=29.78 Aligned_cols=69 Identities=16% Similarity=0.142 Sum_probs=42.9
Q ss_pred HHHHHHHhCCCceEEeCCCCC-------------CCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcE
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSG-------------GEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADM 109 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~-------------ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~ 109 (319)
+.++.+.+.+++++.+| ..+ +...+.+.++...+.. .+.|...- |+.+|.|+..++++|+|.
T Consensus 286 ~~a~~~~~~Gad~I~vg-~g~g~~~~tr~~~~~~~p~~~~l~~~~~~~~~---~~ipvia~GGi~~~~di~kal~~GA~~ 361 (491)
T 1zfj_A 286 EGARALYDAGVDVVKVG-IGPGSICTTRVVAGVGVPQVTAIYDAAAVARE---YGKTIIADGGIKYSGDIVKALAAGGNA 361 (491)
T ss_dssp HHHHHHHHTTCSEEEEC-SSCCTTBCHHHHTCCCCCHHHHHHHHHHHHHH---TTCEEEEESCCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHHHcCCCEEEEC-ccCCcceEEeeecCCCCCcHHHHHHHHHHHhh---cCCCEEeeCCCCCHHHHHHHHHcCCcc
Confidence 34556677899999886 211 1122233333332211 24667664 789999999999999998
Q ss_pred eecCCcc
Q psy14115 110 FDCVFPT 116 (319)
Q Consensus 110 FD~~~Pt 116 (319)
.-.-.|.
T Consensus 362 v~vG~~~ 368 (491)
T 1zfj_A 362 VMLGSMF 368 (491)
T ss_dssp EEESTTT
T ss_pred eeeCHHh
Confidence 7664443
No 151
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=37.00 E-value=1.1e+02 Score=25.81 Aligned_cols=64 Identities=6% Similarity=-0.054 Sum_probs=40.1
Q ss_pred HHHHhCCCceEEeCC--CCC---CCC-HHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 47 HQMVEKDVNGFAVGG--LSG---GEA-KEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 47 ~~l~~~~~~G~aIgG--l~~---ge~-~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
..+.+.+++.+.++. ... +.. ...-++.+..+.+.+ +.|...- |+.+|.++..+.+.|+|.+-.
T Consensus 133 ~~~~~~G~d~i~~~~~g~t~~~~~~~~~~~~~~~~~~~~~~~--~ipvia~GGI~~~~~~~~~~~~Gad~v~v 203 (223)
T 1y0e_A 133 KNAARLGFDYIGTTLHGYTSYTQGQLLYQNDFQFLKDVLQSV--DAKVIAEGNVITPDMYKRVMDLGVHCSVV 203 (223)
T ss_dssp HHHHHTTCSEEECTTTTSSTTSTTCCTTHHHHHHHHHHHHHC--CSEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHcCCCEEEeCCCcCcCCCCCCCCCcccHHHHHHHHhhC--CCCEEEecCCCCHHHHHHHHHcCCCEEEE
Confidence 345567788776542 211 110 122244555555544 4778776 688999999999999998754
No 152
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=36.93 E-value=1.4e+02 Score=25.85 Aligned_cols=61 Identities=13% Similarity=0.065 Sum_probs=39.9
Q ss_pred HHHHHhCCCceEEeCCCC-----CCCCHHHHHHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 46 AHQMVEKDVNGFAVGGLS-----GGEAKEDFWYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 46 ~~~l~~~~~~G~aIgGl~-----~ge~~~e~~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
++.+.+.+++.+.+-+.+ .|.+ ++.+..+.+.+ +.|... -|+.+|+++..+.+.|+|-+=.
T Consensus 162 ~~~~~~~G~~~i~~t~~~~~g~~~g~~----~~~i~~l~~~~--~ipvia~GGI~~~ed~~~~~~~Gadgv~v 228 (266)
T 2w6r_A 162 VVEVEKRGAGEILLTSIDRDGTKSGYD----TEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAALA 228 (266)
T ss_dssp HHHHHHTTCSEEEEEETTTTTTCSCCC----HHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHcCCCEEEEEeecCCCCcCCCC----HHHHHHHHHHc--CCCEEEeCCCCCHHHHHHHHHcCCHHHHc
Confidence 344556777776663322 2222 34555555544 578886 5799999999999999996544
No 153
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=36.32 E-value=1.2e+02 Score=26.13 Aligned_cols=64 Identities=17% Similarity=0.067 Sum_probs=46.3
Q ss_pred HHHHHHhCCCceEEeCCCCCC-CCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEe
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGG-EAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMF 110 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~g-e~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~F 110 (319)
-++.+.+.+++.+.+-+.... .......+.+..+.+.. +.|..+. |+-+|.++..+.+.|+|.+
T Consensus 35 ~a~~~~~~Gad~i~v~d~~~~~~~~~~~~~~i~~i~~~~--~ipvi~~ggI~~~~~~~~~~~~Gad~V 100 (253)
T 1thf_D 35 LGKFYSEIGIDELVFLDITASVEKRKTMLELVEKVAEQI--DIPFTVGGGIHDFETASELILRGADKV 100 (253)
T ss_dssp HHHHHHHTTCCEEEEEESSCSSSHHHHHHHHHHHHHTTC--CSCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHHHHcCCCEEEEECCchhhcCCcccHHHHHHHHHhC--CCCEEEeCCCCCHHHHHHHHHcCCCEE
Confidence 356667788888776655422 23344567777777654 4788876 6799999999999999976
No 154
>3w01_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; HET: PGE; 1.54A {Staphylococcus aureus} PDB: 3w02_A
Probab=35.88 E-value=70 Score=28.74 Aligned_cols=59 Identities=10% Similarity=0.076 Sum_probs=45.8
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcE
Q psy14115 42 RKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADM 109 (319)
Q Consensus 42 R~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~ 109 (319)
-.+.++.+.+.+.+.+.||| +.|-+.+.+.++++.+.+ .+.|..++-- +|..+ .-|+|-
T Consensus 25 ~~~~l~~~~~~GtDaI~vGg-s~gvt~~~~~~~v~~ik~---~~~Piil~p~-~~~~~----~~gaD~ 83 (235)
T 3w01_A 25 SDDDLDAICMSQTDAIMIGG-TDDVTEDNVIHLMSKIRR---YPLPLVLEIS-NIESV----MPGFDF 83 (235)
T ss_dssp CHHHHHHHHTSSCSEEEECC-SSCCCHHHHHHHHHHHTT---SCSCEEEECC-CSTTC----CTTCSE
T ss_pred CHHHHHHHHHcCCCEEEECC-cCCcCHHHHHHHHHHhcC---cCCCEEEecC-CHHHh----hcCCCE
Confidence 34566667889999999999 677789999999999987 4789988643 56444 458884
No 155
>3vzx_A Heptaprenylglyceryl phosphate synthase; biosynthesis, prenyltransferases, enzyme catalysis, transfer; 1.54A {Bacillus subtilis} PDB: 3vzy_A* 3vzz_A* 3w00_A* 1viz_A
Probab=35.81 E-value=64 Score=28.79 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=43.8
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcE
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADM 109 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~ 109 (319)
+.++.+.+.+.+.+.||| +.|-+.+++.++++.+.+ .+.|.+++- ++|..+ .-|+|-
T Consensus 22 ~~~~~~~~~GtD~i~vGG-s~gvt~~~~~~~v~~ik~---~~~Pvvlfp-~~~~~v----~~gaD~ 78 (228)
T 3vzx_A 22 EQLEILCESGTDAVIIGG-SDGVTEDNVLRMMSKVRR---FLVPCVLEV-SAIEAI----VPGFDL 78 (228)
T ss_dssp THHHHHHTSSCSEEEECC-CSCCCHHHHHHHHHHHTT---SSSCEEEEC-SCGGGC----CSCCSE
T ss_pred HHHHHHHHcCCCEEEECC-cCCCCHHHHHHHHHHhhc---cCCCEEEeC-CCHHHc----cccCCE
Confidence 345667788999999999 667788999999999887 368999864 446544 358884
No 156
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=35.55 E-value=58 Score=31.49 Aligned_cols=65 Identities=18% Similarity=0.248 Sum_probs=39.2
Q ss_pred HHHHHHhCCCceEEeCCCCCCC---CH------HHHHHHHHHhhcCCC-CCCCeEec-CCCChHHHHHHHHcCCcEe
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGE---AK------EDFWYSVLVSINCLP-KDKPRYVM-GIGFAVDLLICCALGADMF 110 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge---~~------~e~~~ii~~~~~~LP-~dkPr~l~-Gvg~P~~Il~~V~lGvD~F 110 (319)
.++.+.+.+++++.+|. ..|- .. .-....+..+.+.+. .+.|...- |+.+|.+|..++++|+|.+
T Consensus 197 ~A~~a~~aGAD~I~vG~-g~Gs~~~tr~~~g~g~p~~~al~~v~~~~~~~~IPVIA~GGI~~~~di~kalalGAd~V 272 (400)
T 3ffs_A 197 ATKELIENGADGIKVGI-GPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSV 272 (400)
T ss_dssp HHHHHHHTTCSEEEECC----------CCSCBCCCHHHHHHHHHHHHTTTTCCEEEESCCCSHHHHHHHHTTTCSEE
T ss_pred HHHHHHHcCCCEEEEeC-CCCcCcccccccccchhHHHHHHHHHHHHHhcCCCEEecCCCCCHHHHHHHHHcCCCEE
Confidence 45667778999999852 2110 00 001233333333222 25677765 7899999999999999965
No 157
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=35.12 E-value=1.2e+02 Score=25.02 Aligned_cols=58 Identities=22% Similarity=0.082 Sum_probs=37.1
Q ss_pred CCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcE-e
Q psy14115 52 KDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADM-F 110 (319)
Q Consensus 52 ~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~-F 110 (319)
.+.+-+++..+.. ...+.+.++++.+.+.-+++-|.++=|...+.+.-.+-+.|+|- |
T Consensus 68 ~~~diV~lS~~~~-~~~~~~~~~i~~L~~~g~~~i~v~vGG~~~~~~~~~l~~~G~d~v~ 126 (161)
T 2yxb_A 68 EDVDVIGVSILNG-AHLHLMKRLMAKLRELGADDIPVVLGGTIPIPDLEPLRSLGIREIF 126 (161)
T ss_dssp TTCSEEEEEESSS-CHHHHHHHHHHHHHHTTCTTSCEEEEECCCHHHHHHHHHTTCCEEE
T ss_pred cCCCEEEEEeech-hhHHHHHHHHHHHHhcCCCCCEEEEeCCCchhcHHHHHHCCCcEEE
Confidence 3455555554422 34556777777777654556666776776677776677899994 5
No 158
>2kw0_A CCMH protein; oxidoreductase, cytochrome C maturation; NMR {Escherichia coli}
Probab=35.02 E-value=22 Score=27.60 Aligned_cols=50 Identities=18% Similarity=0.307 Sum_probs=34.4
Q ss_pred CCCCCcccCcCCHHHHhhhhcCChhHhhHHHHHHHHHHHHHHHHHHHHHHcCChHHHHHHHHHHhCC
Q psy14115 147 NQCPCSTCARYTRAYLHHIATVEPSACHLLSVHNIAFQMRLMREIRESIKEQRFPQYVKQYMKDAYP 213 (319)
Q Consensus 147 ~~C~C~tC~~~tRAYLhHLl~~E~la~~LLtiHNl~~~~~l~~~iR~aI~~g~f~~~v~~f~~~~~~ 213 (319)
..=-|+.|++-|=+. ++-.+ -..+-..||+.|++|.=++-+.+|+...|+
T Consensus 22 ~~LRCpvCqnqsI~d-----SnA~i------------A~dlR~~Vre~l~~G~Sd~eI~~~mv~RYG 71 (90)
T 2kw0_A 22 EELRCPKCQNNSIAD-----SNSMI------------ATDLRQKVYELMQEGKSKKEIVDYMVARYG 71 (90)
T ss_dssp HSSBCSCTTSCTTTS-----CCCHH------------HHHHHHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred HcCcCCCCCCCchhh-----cCcHH------------HHHHHHHHHHHHHcCCCHHHHHHHHHHhcC
Confidence 345689999865321 33332 234556899999999988888888876665
No 159
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=34.76 E-value=74 Score=28.02 Aligned_cols=63 Identities=16% Similarity=0.082 Sum_probs=44.2
Q ss_pred HHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeec
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
-++++.+.+++..+++... ..+++.+.++++.+.+. +. ..+..+.++++...+.++|+|.+-.
T Consensus 93 ~i~~~~~~Gad~V~l~~~~-~~~p~~l~~~i~~~~~~---g~-~v~~~v~t~eea~~a~~~Gad~Ig~ 155 (232)
T 3igs_A 93 DVDALAQAGAAIIAVDGTA-RQRPVAVEALLARIHHH---HL-LTMADCSSVDDGLACQRLGADIIGT 155 (232)
T ss_dssp HHHHHHHHTCSEEEEECCS-SCCSSCHHHHHHHHHHT---TC-EEEEECCSHHHHHHHHHTTCSEEEC
T ss_pred HHHHHHHcCCCEEEECccc-cCCHHHHHHHHHHHHHC---CC-EEEEeCCCHHHHHHHHhCCCCEEEE
Confidence 3566778899999887643 23345556666665543 23 3445789999999999999999853
No 160
>3hq1_A 2-isopropylmalate synthase; LEUA, mycobacterium tuberculosis inhibition, bromopyruvate, amino-acid biosynthesis; HET: FLC; 1.70A {Mycobacterium tuberculosis} PDB: 1sr9_A 3hpz_A 3hps_A* 3fig_A 3u6w_A 3hpx_A
Probab=34.43 E-value=2.4e+02 Score=28.97 Aligned_cols=88 Identities=14% Similarity=0.016 Sum_probs=63.2
Q ss_pred CCHHHHHHHHHHHHhC---CCc---eEEeCCCCCCCCHHHHHHHHHHhhcCCCC--CCCe--EecC-CCC-hHHHHHHHH
Q psy14115 37 LDEALRKDCAHQMVEK---DVN---GFAVGGLSGGEAKEDFWYSVLVSINCLPK--DKPR--YVMG-IGF-AVDLLICCA 104 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~---~~~---G~aIgGl~~ge~~~e~~~ii~~~~~~LP~--dkPr--~l~G-vg~-P~~Il~~V~ 104 (319)
.+++.-.+.++.+.+. +.+ -+.|....+-..+.++.++|..+.+.+|. +.|. |... .|. -.+.+.++.
T Consensus 223 td~dfl~ev~~aa~eaG~~Gad~~~~I~LpDTvG~~tP~~~~~li~~l~~~v~~~~~v~l~vH~HND~GlAvANslaAv~ 302 (644)
T 3hq1_A 223 TELEYAKQVCDAVGEVIAPTPERPIIFNLPATVEMTTPNVYADSIEWMSRNLANRESVILSLHPHNDRGTAVAAAELGFA 302 (644)
T ss_dssp SCHHHHHHHHHHHHHHHCCCSSSCEEEEEEESSCCSCHHHHHHHHHHHHHHSTTGGGEEEEEEEBCTTSCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhcCCCCCceeEEEecCCCcccCHHHHHHHHHHHHHhcccccCceEEEecCCCCCcHHHHHHHHHH
Confidence 6788777778877764 344 56677766667899999999999998885 3343 3321 343 457899999
Q ss_pred cCCcEeecCCccccCcCCcc
Q psy14115 105 LGADMFDCVFPTRTARFGSA 124 (319)
Q Consensus 105 lGvD~FD~~~Ptr~Ar~G~a 124 (319)
.|+|.||+..--.-.|-|.+
T Consensus 303 AGA~~Vdgti~G~GERaGNa 322 (644)
T 3hq1_A 303 AGADRIEGCLFGNGERTGNV 322 (644)
T ss_dssp TTCCEEEEBGGGCSSTTCBC
T ss_pred hCCCEEEecCCCCCccccCc
Confidence 99999998765555556654
No 161
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=34.40 E-value=1.1e+02 Score=28.48 Aligned_cols=76 Identities=18% Similarity=0.020 Sum_probs=50.3
Q ss_pred cCCCCHHHHHHHHHHHHhCCCceEEeC--CCCCC---CCHHHHHHHHHHhhcCCCCCCCeEecC-CCChHHHHHHHHcC-
Q psy14115 34 QGGLDEALRKDCAHQMVEKDVNGFAVG--GLSGG---EAKEDFWYSVLVSINCLPKDKPRYVMG-IGFAVDLLICCALG- 106 (319)
Q Consensus 34 qGG~~~dlR~~s~~~l~~~~~~G~aIg--Gl~~g---e~~~e~~~ii~~~~~~LP~dkPr~l~G-vg~P~~Il~~V~lG- 106 (319)
.||.+.+.-.+-++.+.+.+++.+-+. +.... ..+...++.+..+.+.+ +.|....| +-+|++...+++.|
T Consensus 223 ~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~--~iPVi~~GgI~s~e~a~~~L~~G~ 300 (340)
T 3gr7_A 223 PDGLTAKDYVPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREA--DIPTGAVGLITSGWQAEEILQNGR 300 (340)
T ss_dssp TTSCCGGGHHHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHT--TCCEEEESSCCCHHHHHHHHHTTS
T ss_pred CCCCCHHHHHHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHc--CCcEEeeCCCCCHHHHHHHHHCCC
Confidence 456777777778888999999988874 22210 01111344444555444 47777664 57899999999999
Q ss_pred CcEee
Q psy14115 107 ADMFD 111 (319)
Q Consensus 107 vD~FD 111 (319)
+|++-
T Consensus 301 aD~V~ 305 (340)
T 3gr7_A 301 ADLVF 305 (340)
T ss_dssp CSEEE
T ss_pred eeEEE
Confidence 99764
No 162
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=34.19 E-value=1.3e+02 Score=28.50 Aligned_cols=73 Identities=16% Similarity=0.049 Sum_probs=50.2
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeCCC-------CCCCCHH--HHHHHHHHhhcCCCCCCCeEecCC---CChHHHHHHH
Q psy14115 36 GLDEALRKDCAHQMVEKDVNGFAVGGL-------SGGEAKE--DFWYSVLVSINCLPKDKPRYVMGI---GFAVDLLICC 103 (319)
Q Consensus 36 G~~~dlR~~s~~~l~~~~~~G~aIgGl-------~~ge~~~--e~~~ii~~~~~~LP~dkPr~l~Gv---g~P~~Il~~V 103 (319)
|...+.-.+.++.+ +.++..|.=. ..|.... ..++.|+.+.+.++ .|..+=++ -+|.+...+.
T Consensus 134 ~~~~~~~~~av~~~---~a~al~Ihln~~~~~~~p~g~~~~~~~~~~~i~~i~~~~~--vPVivK~vG~g~s~~~A~~l~ 208 (368)
T 3vkj_A 134 GYGLKEFQDAIQMI---EADAIAVHLNPAQEVFQPEGEPEYQIYALEKLRDISKELS--VPIIVKESGNGISMETAKLLY 208 (368)
T ss_dssp TCCHHHHHHHHHHT---TCSEEEEECCHHHHHHSSSCCCBCBTHHHHHHHHHHTTCS--SCEEEECSSSCCCHHHHHHHH
T ss_pred CCCHHHHHHHHHHh---cCCCeEEEecchhhhhCCCCCchhhHHHHHHHHHHHHHcC--CCEEEEeCCCCCCHHHHHHHH
Confidence 37777766666665 4556665411 0122211 37888888888874 89988656 3799999999
Q ss_pred HcCCcEeecC
Q psy14115 104 ALGADMFDCV 113 (319)
Q Consensus 104 ~lGvD~FD~~ 113 (319)
..|+|.++..
T Consensus 209 ~aGad~I~V~ 218 (368)
T 3vkj_A 209 SYGIKNFDTS 218 (368)
T ss_dssp HTTCCEEECC
T ss_pred hCCCCEEEEe
Confidence 9999999864
No 163
>3t7v_A Methylornithine synthase PYLB; TIM-barrel fold, mutase, [4Fe-4S]-cluster, SAM, lysine, transferase; HET: SAM MD0; 1.50A {Methanosarcina barkeri}
Probab=34.17 E-value=55 Score=30.04 Aligned_cols=83 Identities=13% Similarity=0.067 Sum_probs=50.3
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeCCCCC----------CCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHc
Q psy14115 36 GLDEALRKDCAHQMVEKDVNGFAVGGLSG----------GEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCAL 105 (319)
Q Consensus 36 G~~~dlR~~s~~~l~~~~~~G~aIgGl~~----------ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~l 105 (319)
|-..+-+.+.++.+.+.+.+-+.+.-+.+ ..+.+++.+++..++-.+|.-.-+-..-...+.....++..
T Consensus 213 get~e~~~~~l~~l~~l~~~~v~~~~f~p~~gT~l~~~~~~~~~e~l~~ia~~Rl~lp~~~I~a~~~~~g~~~~~~~l~~ 292 (350)
T 3t7v_A 213 GNDIESTILSLRGMSTNDPDMVRVMTFLPQEGTPLEGFRDKSNLSELKIISVLRLMFPKRLIPASLDLEGIDGMVLRLNA 292 (350)
T ss_dssp SCCHHHHHHHHHHHHHTCCSEEEEEECCCCTTSTTTTCCCCCCCCHHHHHHHHHHHSTTSBCEEEHHHHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHhCCCCEEEecceeeCCCCcCccCCCCChHHHHHHHHHHHHhCCCcCccccccccChhHHHHHHhc
Confidence 35566777888888887766444443321 12345778888887777775311111111223345578899
Q ss_pred CCcEeecCCcccc
Q psy14115 106 GADMFDCVFPTRT 118 (319)
Q Consensus 106 GvD~FD~~~Ptr~ 118 (319)
|+|.++.+.+-..
T Consensus 293 Gan~~~~~~~~~~ 305 (350)
T 3t7v_A 293 GANIVTSILPPDS 305 (350)
T ss_dssp TCCEEEEECCSSC
T ss_pred CCceecCCCCCCC
Confidence 9999998877664
No 164
>2ekc_A AQ_1548, tryptophan synthase alpha chain; structural genomics, lyase, NPPSFA, national project on PROT structural and functional analyses; 2.00A {Aquifex aeolicus}
Probab=34.06 E-value=2e+02 Score=25.48 Aligned_cols=40 Identities=20% Similarity=-0.026 Sum_probs=27.6
Q ss_pred HHHHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 70 DFWYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 70 e~~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+..+.++.+.+.. +.|..+ +|+.+|+++.. +..|+|.+-.
T Consensus 193 ~~~~~v~~vr~~~--~~pv~vG~GI~t~e~~~~-~~~gADgvIV 233 (262)
T 2ekc_A 193 RIKKKVEEYRELC--DKPVVVGFGVSKKEHARE-IGSFADGVVV 233 (262)
T ss_dssp HHHHHHHHHHHHC--CSCEEEESSCCSHHHHHH-HHTTSSEEEE
T ss_pred cHHHHHHHHHhhc--CCCEEEeCCCCCHHHHHH-HHcCCCEEEE
Confidence 3455666666544 467665 67888999888 8888887643
No 165
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=33.37 E-value=46 Score=35.73 Aligned_cols=41 Identities=24% Similarity=0.224 Sum_probs=31.8
Q ss_pred HHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeecC
Q psy14115 72 WYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 72 ~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
.+++..+.+.+| +.|.... ||.++.++..++++|+|.+-..
T Consensus 775 ~~~v~~v~~~~~-~ipvi~~GGI~s~~da~~~l~~Ga~~v~vg 816 (1025)
T 1gte_A 775 LRAVTTIARALP-GFPILATGGIDSAESGLQFLHSGASVLQVC 816 (1025)
T ss_dssp HHHHHHHHHHST-TCCEEEESSCCSHHHHHHHHHTTCSEEEES
T ss_pred HHHHHHHHHHcC-CCCEEEecCcCCHHHHHHHHHcCCCEEEEe
Confidence 356666666664 5788876 6899999999999999987554
No 166
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=33.30 E-value=73 Score=30.30 Aligned_cols=83 Identities=10% Similarity=-0.078 Sum_probs=53.3
Q ss_pred CCceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCC-------CCCCC-HHHHHHHHHHhhcCCCCCCCeEecCC---C
Q psy14115 26 TQNIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGL-------SGGEA-KEDFWYSVLVSINCLPKDKPRYVMGI---G 94 (319)
Q Consensus 26 ~q~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl-------~~ge~-~~e~~~ii~~~~~~LP~dkPr~l~Gv---g 94 (319)
...+++.|-.+...+.-.+.++ ..+.+.++|.-- ..|+. .+.+.+.|+.+++.+ ++|..+=++ -
T Consensus 144 ~~~~ianig~~~~~e~~~~~ve---~~~adal~ihln~~qe~~~p~Gd~~~~~~~~~I~~l~~~~--~~PVivK~vg~g~ 218 (365)
T 3sr7_A 144 HLLLATNIGLDKPYQAGLQAVR---DLQPLFLQVHINLMQELLMPEGEREFRSWKKHLSDYAKKL--QLPFILKEVGFGM 218 (365)
T ss_dssp -CCEEEEEETTSCHHHHHHHHH---HHCCSCEEEEECHHHHHTSSSSCCCCHHHHHHHHHHHHHC--CSCEEEEECSSCC
T ss_pred CCcEEEEeCCCCCHHHHHHHHH---hcCCCEEEEeccccccccCCCCCCcHHHHHHHHHHHHHhh--CCCEEEEECCCCC
Confidence 3567777766555443233333 345666654421 12332 335667888888876 489988766 4
Q ss_pred ChHHHHHHHHcCCcEeecC
Q psy14115 95 FAVDLLICCALGADMFDCV 113 (319)
Q Consensus 95 ~P~~Il~~V~lGvD~FD~~ 113 (319)
+|++...+++.|+|.++..
T Consensus 219 s~e~A~~l~~aGad~I~V~ 237 (365)
T 3sr7_A 219 DVKTIQTAIDLGVKTVDIS 237 (365)
T ss_dssp CHHHHHHHHHHTCCEEECC
T ss_pred CHHHHHHHHHcCCCEEEEe
Confidence 8999999999999999864
No 167
>1vhc_A Putative KHG/KDPG aldolase; structural genomics, unknown function; HET: MSE; 1.89A {Haemophilus influenzae} SCOP: c.1.10.1
Probab=33.24 E-value=80 Score=27.74 Aligned_cols=54 Identities=17% Similarity=0.187 Sum_probs=36.3
Q ss_pred HHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCc
Q psy14115 49 MVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFP 115 (319)
Q Consensus 49 l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~P 115 (319)
..+.+.+|...++. + .++++.+.. + .+.+++|+.+|.++..+.+.|+|.+=. ||
T Consensus 85 A~~aGAd~v~~p~~----d----~~v~~~ar~-~---g~~~i~Gv~t~~e~~~A~~~Gad~vk~-Fp 138 (224)
T 1vhc_A 85 AKSSGADFVVTPGL----N----PKIVKLCQD-L---NFPITPGVNNPMAIEIALEMGISAVKF-FP 138 (224)
T ss_dssp HHHHTCSEEECSSC----C----HHHHHHHHH-T---TCCEECEECSHHHHHHHHHTTCCEEEE-TT
T ss_pred HHHCCCCEEEECCC----C----HHHHHHHHH-h---CCCEEeccCCHHHHHHHHHCCCCEEEE-ee
Confidence 34456777765542 2 234445554 3 234456999999999999999998665 88
No 168
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=33.22 E-value=1.1e+02 Score=29.36 Aligned_cols=66 Identities=14% Similarity=0.022 Sum_probs=49.0
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeec
Q psy14115 43 KDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 43 ~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.+-++.+.+.+++-+.+... .| .++.+.+.|+.+.+.+ +.|..+-++.++++...+++.|+|.+..
T Consensus 146 ~e~~~~lveaGvdvIvldta-~G-~~~~~~e~I~~ik~~~--~i~Vi~g~V~t~e~A~~a~~aGAD~I~v 211 (400)
T 3ffs_A 146 IERAKLLVEAGVDVIVLDSA-HG-HSLNIIRTLKEIKSKM--NIDVIVGNVVTEEATKELIENGADGIKV 211 (400)
T ss_dssp CHHHHHHHHHTCSEEEECCS-CC-SBHHHHHHHHHHHTTC--CCEEEEEEECSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHHcCCCEEEEeCC-CC-CcccHHHHHHHHHhcC--CCeEEEeecCCHHHHHHHHHcCCCEEEE
Confidence 45677788889998887532 22 3456677888877766 3555544689999999999999999876
No 169
>3m47_A Orotidine 5'-phosphate decarboxylase; orotidine 5'-monophosphate decarboxylase, mutant I218A, LYAS; 1.20A {Methanothermobacter thermautotrophicusdelta H} SCOP: c.1.2.3 PDB: 3li1_A 3m5z_A 3lty_A 3ltp_A* 3g18_A* 3g1d_A* 3g1f_A* 3g1h_A* 3g1a_A* 3lv6_A* 1klz_A* 3g1y_A 3g22_A* 3g24_A* 3p5z_A* 3siz_A* 3sy5_A* 1loq_A* 1lor_A* 1kly_A* ...
Probab=32.90 E-value=34 Score=30.16 Aligned_cols=62 Identities=16% Similarity=-0.033 Sum_probs=33.3
Q ss_pred HHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCCh-HHHHHHHHcCCcEeecCC
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFA-VDLLICCALGADMFDCVF 114 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P-~~Il~~V~lGvD~FD~~~ 114 (319)
+.++...+.+++|+..+.. ..++..+ +++..|.+-+...+|+|.- .+. .+++.|.|.+-.-.
T Consensus 141 ~~a~~a~~~G~~GvV~~at----~~~e~~~----ir~~~~~~~~iv~PGI~~~g~~p-~~~~aGad~iVvGr 203 (228)
T 3m47_A 141 EIARMGVDLGVKNYVGPST----RPERLSR----LREIIGQDSFLISPGVGAQGGDP-GETLRFADAIIVGR 203 (228)
T ss_dssp HHHHHHHHTTCCEEECCSS----CHHHHHH----HHHHHCSSSEEEECC----------CGGGTCSEEEECH
T ss_pred HHHHHHHHhCCcEEEECCC----ChHHHHH----HHHhcCCCCEEEecCcCcCCCCH-hHHHcCCCEEEECH
Confidence 3344445678999887662 3444433 3334566666777888632 134 77889999765433
No 170
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=32.84 E-value=18 Score=33.28 Aligned_cols=73 Identities=16% Similarity=0.131 Sum_probs=46.5
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeCCCCC--CCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHH-cCCcEee
Q psy14115 36 GLDEALRKDCAHQMVEKDVNGFAVGGLSG--GEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCA-LGADMFD 111 (319)
Q Consensus 36 G~~~dlR~~s~~~l~~~~~~G~aIgGl~~--ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~-lGvD~FD 111 (319)
|.+.+.-.+-++.+.+.+++++.+.|-.. +.+....++.+..+.+ +.|...- |+.+|+++..+++ .|+|.+=
T Consensus 136 G~~~~~~~~~a~~l~~~G~d~i~v~g~~~~~~~~~~~~~~~i~~i~~----~ipVi~~GgI~s~~da~~~l~~~gad~V~ 211 (318)
T 1vhn_A 136 GWEKNEVEEIYRILVEEGVDEVFIHTRTVVQSFTGRAEWKALSVLEK----RIPTFVSGDIFTPEDAKRALEESGCDGLL 211 (318)
T ss_dssp CSSSCCHHHHHHHHHHTTCCEEEEESSCTTTTTSSCCCGGGGGGSCC----SSCEEEESSCCSHHHHHHHHHHHCCSEEE
T ss_pred CCChHHHHHHHHHHHHhCCCEEEEcCCCccccCCCCcCHHHHHHHHc----CCeEEEECCcCCHHHHHHHHHcCCCCEEE
Confidence 55433223678888889999998865321 1111111244444443 6788775 5789999999998 7999764
Q ss_pred c
Q psy14115 112 C 112 (319)
Q Consensus 112 ~ 112 (319)
.
T Consensus 212 i 212 (318)
T 1vhn_A 212 V 212 (318)
T ss_dssp E
T ss_pred E
Confidence 4
No 171
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=32.82 E-value=80 Score=29.43 Aligned_cols=86 Identities=17% Similarity=0.140 Sum_probs=53.2
Q ss_pred Cceeeec--------cCCCC--HHHHHHHHHHHHhCCCceEEeCCCCC--CCC----HHHHHH---HHHHhhcCCCCCCC
Q psy14115 27 QNIFPIV--------QGGLD--EALRKDCAHQMVEKDVNGFAVGGLSG--GEA----KEDFWY---SVLVSINCLPKDKP 87 (319)
Q Consensus 27 q~lfgiV--------qGG~~--~dlR~~s~~~l~~~~~~G~aIgGl~~--ge~----~~e~~~---ii~~~~~~LP~dkP 87 (319)
..+.||+ -||.+ .+.=.+-++++.+.|.+-+=|||-|. |-+ .+|+.+ +|+.+.+.. +.|
T Consensus 10 ~~iMGIlNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~--~vp 87 (314)
T 2vef_A 10 TVICGIINVTPDSFSDGGQFFALEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKES--DVL 87 (314)
T ss_dssp CEEEEEEECCC---------CHHHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHC--CCE
T ss_pred ceEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhC--Cce
Confidence 4566666 25543 34445567888899999999999763 311 245544 444455432 333
Q ss_pred eEecCCCChHHHHHHHHcCCcEeecCCc
Q psy14115 88 RYVMGIGFAVDLLICCALGADMFDCVFP 115 (319)
Q Consensus 88 r~l~Gvg~P~~Il~~V~lGvD~FD~~~P 115 (319)
...-.-.|.-+-.|++.|+|++-.+.-
T Consensus 88 -iSIDT~~~~Va~aAl~aGa~iINDVsg 114 (314)
T 2vef_A 88 -ISIDTWKSQVAEAALAAGADLVNDITG 114 (314)
T ss_dssp -EEEECSCHHHHHHHHHTTCCEEEETTT
T ss_pred -EEEeCCCHHHHHHHHHcCCCEEEECCC
Confidence 333557899999999999999966653
No 172
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=32.69 E-value=20 Score=31.93 Aligned_cols=48 Identities=17% Similarity=0.358 Sum_probs=33.9
Q ss_pred eEecCCCChHHHHHHHHcCCcEeecCCccccC-----------cC-CcceeccceEEcCCc
Q psy14115 88 RYVMGIGFAVDLLICCALGADMFDCVFPTRTA-----------RF-GSALVRQGQLQLKRD 136 (319)
Q Consensus 88 r~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~A-----------r~-G~alt~~G~i~L~~~ 136 (319)
.+++|+.+|.++..+.++|+|++ -.||.... .. ..-+.+.|.++..|.
T Consensus 114 ~~~PG~~TptE~~~A~~~Gad~v-K~FPa~~~gG~~~lkal~~p~p~i~~~ptGGI~~~N~ 173 (217)
T 3lab_A 114 VFLPGVATASEVMIAAQAGITQL-KCFPASAIGGAKLLKAWSGPFPDIQFCPTGGISKDNY 173 (217)
T ss_dssp EEEEEECSHHHHHHHHHTTCCEE-EETTTTTTTHHHHHHHHHTTCTTCEEEEBSSCCTTTH
T ss_pred eEeCCCCCHHHHHHHHHcCCCEE-EECccccccCHHHHHHHHhhhcCceEEEeCCCCHHHH
Confidence 57789999999999999999998 45785431 01 223345577777663
No 173
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=32.55 E-value=1.2e+02 Score=28.29 Aligned_cols=78 Identities=15% Similarity=-0.028 Sum_probs=50.1
Q ss_pred ccCCCCHHHHHHHHHHHHhCCCceEEeC--CCCCC----CCHHHHHHHHHHhhcCCCCCCCeEecC-CCChHHHHHHHHc
Q psy14115 33 VQGGLDEALRKDCAHQMVEKDVNGFAVG--GLSGG----EAKEDFWYSVLVSINCLPKDKPRYVMG-IGFAVDLLICCAL 105 (319)
Q Consensus 33 VqGG~~~dlR~~s~~~l~~~~~~G~aIg--Gl~~g----e~~~e~~~ii~~~~~~LP~dkPr~l~G-vg~P~~Il~~V~l 105 (319)
+.||.+.+.=.+-++.|.+.+++.+-+. +.... ..+...++.+..+.+.+ +.|...-| +-+|++...+++.
T Consensus 232 ~~~g~~~~~~~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~--~iPVi~~Ggi~t~e~a~~~l~~ 309 (349)
T 3hgj_A 232 GEGGWSLEDTLAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRV--GLRTGAVGLITTPEQAETLLQA 309 (349)
T ss_dssp STTSCCHHHHHHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHH--CCEEEECSSCCCHHHHHHHHHT
T ss_pred cCCCCCHHHHHHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHc--CceEEEECCCCCHHHHHHHHHC
Confidence 3467887776777888889999988875 33211 01111233344444333 36666654 4689999999999
Q ss_pred C-CcEeec
Q psy14115 106 G-ADMFDC 112 (319)
Q Consensus 106 G-vD~FD~ 112 (319)
| +|++-.
T Consensus 310 G~aD~V~i 317 (349)
T 3hgj_A 310 GSADLVLL 317 (349)
T ss_dssp TSCSEEEE
T ss_pred CCceEEEe
Confidence 9 898743
No 174
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=32.44 E-value=1.1e+02 Score=28.64 Aligned_cols=72 Identities=18% Similarity=0.039 Sum_probs=44.2
Q ss_pred HHHHHHhCCCceEEeCCC--------CCCCCH-HHHHHHHHHhhcC---CCC-CCCeEec-CCCChHHHHHHHHcCCcEe
Q psy14115 45 CAHQMVEKDVNGFAVGGL--------SGGEAK-EDFWYSVLVSINC---LPK-DKPRYVM-GIGFAVDLLICCALGADMF 110 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl--------~~ge~~-~e~~~ii~~~~~~---LP~-dkPr~l~-Gvg~P~~Il~~V~lGvD~F 110 (319)
.++.+.+.+++++.+|.- ..|.+. +.+.++.+.+... +.. +.|...- |+.++.|+..++++|+|.+
T Consensus 224 ~a~~~~~~Gad~i~vg~Gg~~~~~~~~~g~~~~~~l~~v~~~~~~~~~~~~~~~ipvia~GGI~~~~dv~kalalGA~~V 303 (393)
T 2qr6_A 224 TALHMMRTGAVGIIVGGGENTNSLALGMEVSMATAIADVAAARRDYLDETGGRYVHIIADGSIENSGDVVKAIACGADAV 303 (393)
T ss_dssp HHHHHHTTTCSEEEESCCSCCHHHHTSCCCCHHHHHHHHHHHHHHHHHHHTSCCCEEEECSSCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHHHcCCCEEEECCCcccccccCCCCCChHHHHHHHHHHHHHhHhhcCCcceEEEEECCCCCHHHHHHHHHcCCCEE
Confidence 466677889999999530 112232 2233333332111 222 2567765 6899999999999999987
Q ss_pred ecCCcc
Q psy14115 111 DCVFPT 116 (319)
Q Consensus 111 D~~~Pt 116 (319)
-.--|.
T Consensus 304 ~iG~~~ 309 (393)
T 2qr6_A 304 VLGSPL 309 (393)
T ss_dssp EECGGG
T ss_pred EECHHH
Confidence 655443
No 175
>3jr2_A Hexulose-6-phosphate synthase SGBH; 3-keto-L-gulonate-6-phosphate decarboxylase, ULAD, niaid,CSG bound, biosynthetic protein; HET: MSE; 1.80A {Vibrio cholerae} SCOP: c.1.2.0 PDB: 3ieb_A*
Probab=31.85 E-value=53 Score=28.23 Aligned_cols=63 Identities=11% Similarity=-0.028 Sum_probs=42.4
Q ss_pred HHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeE-ecCCCChHHHHHHHHcCCcEeec
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRY-VMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~-l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.++.+.+.+++++.+-+.+. .+.+.+.++.+.+. .-++.. ++|+.||+++..+...|+|.+-.
T Consensus 75 ~~~~~~~aGad~i~vh~~~~---~~~~~~~~~~~~~~--g~~~~~d~l~~~T~~~~~~~~~~g~d~v~~ 138 (218)
T 3jr2_A 75 LSRMAFEAGADWITVSAAAH---IATIAACKKVADEL--NGEIQIEIYGNWTMQDAKAWVDLGITQAIY 138 (218)
T ss_dssp HHHHHHHHTCSEEEEETTSC---HHHHHHHHHHHHHH--TCEEEEECCSSCCHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHhcCCCEEEEecCCC---HHHHHHHHHHHHHh--CCccceeeeecCCHHHHHHHHHcCccceee
Confidence 45667778999999887643 23345555555432 113333 77889999999999999996543
No 176
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=31.15 E-value=97 Score=28.73 Aligned_cols=52 Identities=21% Similarity=0.230 Sum_probs=35.0
Q ss_pred CCCCCCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 60 GGLSGGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 60 gGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
||+|+-..+..-.++|..+...+| +.|..-. ||-+++|.++.+.+|+|.+-.
T Consensus 253 GGlSG~~~~~~a~~~v~~~~~~~~-~~pIIg~GGI~s~~Da~e~i~aGAs~Vqv 305 (354)
T 3tjx_A 253 GGLGGRYVLPTALANINAFYRRCP-GKLIFGCGGVYTGEDAFLHVLAGASMVQV 305 (354)
T ss_dssp EEEEGGGGHHHHHHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHHHHTEEEEEE
T ss_pred cccCchhhHHHHHHHHHHHHHhcC-CCcEEEeCCcCCHHHHHHHHHcCCCEEEE
Confidence 344433334444566766666665 5665544 688999999999999998653
No 177
>4a29_A Engineered retro-aldol enzyme RA95.0; de novo protein, engineered enzyme, retro-aldolase, directed evolution; HET: 3NK MLT; 1.10A {Synthetic construct} PDB: 4a2s_A* 4a2r_A* 3tc7_A 3tc6_A 3nl8_A* 3nxf_A* 3o6y_X 3ud6_A* 1igs_A 1juk_A 1jul_A* 3hoj_A 1a53_A* 1lbf_A* 1lbl_A* 3nyz_A 3nz1_A* 3uy7_A 3uxd_A* 3uxa_A* ...
Probab=31.11 E-value=59 Score=29.75 Aligned_cols=36 Identities=19% Similarity=0.253 Sum_probs=29.9
Q ss_pred HHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEee
Q psy14115 76 LVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFD 111 (319)
Q Consensus 76 ~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD 111 (319)
....+.+|++.+... .|+.+|.|+..+...|+|-|=
T Consensus 195 ~~L~~~ip~~~~~VsESGI~t~~dv~~l~~~G~~a~L 231 (258)
T 4a29_A 195 RKLISMIPSNVVKVAKLGISERNEIEELRKLGVNAFL 231 (258)
T ss_dssp HHHHTTSCTTSEEEEEESSCCHHHHHHHHHTTCCEEE
T ss_pred HHHHhhCCCCCEEEEcCCCCCHHHHHHHHHCCCCEEE
Confidence 345678898887665 699999999999999999774
No 178
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=30.96 E-value=1.3e+02 Score=27.71 Aligned_cols=86 Identities=19% Similarity=0.173 Sum_probs=56.1
Q ss_pred Cceeeecc--------CCCC--HHHHHHHHHHHHhCCCceEEeCCCCC--C----CCHHHHHHHH---HHhhcCCCCCCC
Q psy14115 27 QNIFPIVQ--------GGLD--EALRKDCAHQMVEKDVNGFAVGGLSG--G----EAKEDFWYSV---LVSINCLPKDKP 87 (319)
Q Consensus 27 q~lfgiVq--------GG~~--~dlR~~s~~~l~~~~~~G~aIgGl~~--g----e~~~e~~~ii---~~~~~~LP~dkP 87 (319)
..++||+- ||.+ .+.=.+-++++.+.+.+-+-|||-|. | ...+|+.+++ +.+.+.. +.|
T Consensus 40 ~~iMgilNvTPDSFsdgg~~~~~~~a~~~a~~~v~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~--~vp 117 (297)
T 1tx2_A 40 TLIMGILNVTPDSFSDGGSYNEVDAAVRHAKEMRDEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEV--KLP 117 (297)
T ss_dssp CEEEEECCCCCCTTCSSCBHHHHHHHHHHHHHHHHTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHS--CSC
T ss_pred CEEEEEEeCCCCccccCCccCCHHHHHHHHHHHHHcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcC--Cce
Confidence 45777763 4443 23334456777889999999999763 3 1256666555 5555432 455
Q ss_pred eEecCCCChHHHHHHHHcCCcEeecCCc
Q psy14115 88 RYVMGIGFAVDLLICCALGADMFDCVFP 115 (319)
Q Consensus 88 r~l~Gvg~P~~Il~~V~lGvD~FD~~~P 115 (319)
.-+ -.-.|.-+-.+++.|.|++-++..
T Consensus 118 iSI-DT~~~~V~~aAl~aGa~iINdvsg 144 (297)
T 1tx2_A 118 ISI-DTYKAEVAKQAIEAGAHIINDIWG 144 (297)
T ss_dssp EEE-ECSCHHHHHHHHHHTCCEEEETTT
T ss_pred EEE-eCCCHHHHHHHHHcCCCEEEECCC
Confidence 433 446899999999999999977654
No 179
>1qop_A Tryptophan synthase alpha chain; lyase, carbon-oxygen lyase, tryptophan biosynthesis, pyridoxal phosphate; HET: IPL PLP; 1.4A {Salmonella typhimurium} SCOP: c.1.2.4 PDB: 1k8x_A* 1wbj_A* 2clk_A* 2j9z_A* 3cep_A* 1k8y_A* 1a5s_A* 1a50_A* 1c29_A* 1c8v_A* 1c9d_A* 1bks_A* 1cx9_A* 1fuy_A* 1cw2_A* 1k7e_A* 1k7f_A* 1k7x_A* 1k3u_A* 1k8z_A* ...
Probab=30.26 E-value=88 Score=27.89 Aligned_cols=39 Identities=13% Similarity=-0.010 Sum_probs=28.8
Q ss_pred HHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 72 WYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 72 ~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.+.|..+.+.. +.|..+ .|+.+|+++..++..|+|.+-.
T Consensus 194 ~~~i~~lr~~~--~~pi~vggGI~t~e~~~~~~~agAD~vVV 233 (268)
T 1qop_A 194 HHLIEKLKEYH--AAPALQGFGISSPEQVSAAVRAGAAGAIS 233 (268)
T ss_dssp HHHHHHHHHTT--CCCEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcc--CCcEEEECCCCCHHHHHHHHHcCCCEEEE
Confidence 44444555444 567766 7888999999999999998754
No 180
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=30.14 E-value=99 Score=28.52 Aligned_cols=82 Identities=13% Similarity=0.008 Sum_probs=52.1
Q ss_pred CceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCC-------CCCH-HHHHHHHHHhhcCCCCCCCeEecCC---CC
Q psy14115 27 QNIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSG-------GEAK-EDFWYSVLVSINCLPKDKPRYVMGI---GF 95 (319)
Q Consensus 27 q~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~-------ge~~-~e~~~ii~~~~~~LP~dkPr~l~Gv---g~ 95 (319)
..+++.+-.|.+++.-.+.++ +.+++++.|-.-.. +... +..+++|..+++.. +.|..+.++ -+
T Consensus 117 ~pv~~~i~~~~~~~~~~~~~~---~~gad~i~i~~~~~~~~~~~~~~~~~~~~~~~i~~vr~~~--~~Pv~vK~~~~~~~ 191 (349)
T 1p0k_A 117 GLIFANLGSEATAAQAKEAVE---MIGANALQIHLNVIQEIVMPEGDRSFSGALKRIEQICSRV--SVPVIVKEVGFGMS 191 (349)
T ss_dssp SCEEEEEETTCCHHHHHHHHH---HTTCSEEEEEECTTTTC--------CTTHHHHHHHHHHHC--SSCEEEEEESSCCC
T ss_pred ceeEEeecCCCCHHHHHHHHH---hcCCCeEEecccchhhhcCCCCCcchHHHHHHHHHHHHHc--CCCEEEEecCCCCC
Confidence 457777764677765444433 34677765532111 1111 12567788777665 488888643 57
Q ss_pred hHHHHHHHHcCCcEeecC
Q psy14115 96 AVDLLICCALGADMFDCV 113 (319)
Q Consensus 96 P~~Il~~V~lGvD~FD~~ 113 (319)
|+++..+.+.|+|.++.+
T Consensus 192 ~~~a~~a~~~Gad~I~v~ 209 (349)
T 1p0k_A 192 KASAGKLYEAGAAAVDIG 209 (349)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHcCCCEEEEc
Confidence 999999999999998875
No 181
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=30.07 E-value=1.2e+02 Score=26.65 Aligned_cols=61 Identities=8% Similarity=-0.134 Sum_probs=36.5
Q ss_pred HHHHhCCCceEEeC--CCCCCC-CHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEe
Q psy14115 47 HQMVEKDVNGFAVG--GLSGGE-AKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMF 110 (319)
Q Consensus 47 ~~l~~~~~~G~aIg--Gl~~ge-~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~F 110 (319)
+...+.+++.+.+. |+..+. ...--++.+..+.+. +.|...- |+.+|.++..+.++|+|-+
T Consensus 143 ~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~~i~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV 207 (232)
T 3igs_A 143 LACQRLGADIIGTTMSGYTTPDTPEEPDLPLVKALHDA---GCRVIAEGRYNSPALAAEAIRYGAWAV 207 (232)
T ss_dssp HHHHHTTCSEEECTTTTSSSSSCCSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHHTTCSEE
T ss_pred HHHHhCCCCEEEEcCccCCCCCCCCCCCHHHHHHHHhc---CCcEEEECCCCCHHHHHHHHHcCCCEE
Confidence 34456788876532 332111 000012344444443 6788764 7899999999999999975
No 182
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=30.04 E-value=78 Score=29.54 Aligned_cols=68 Identities=18% Similarity=0.017 Sum_probs=44.6
Q ss_pred HHHHHHHHhCCCceEEeCCCCC--CCCHH-------HHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 43 KDCAHQMVEKDVNGFAVGGLSG--GEAKE-------DFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 43 ~~s~~~l~~~~~~G~aIgGl~~--ge~~~-------e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.+-++.+.+.+++++.+.|-.. |.+.. -.++.+..+.+.+| +.|...- |+.+|+++..+++ |+|.+=.
T Consensus 147 ~~~a~~l~~aG~d~I~V~~r~~~~g~~g~~~~~~~~~~~~~i~~ik~~~~-~iPVianGgI~s~eda~~~l~-GaD~V~i 224 (350)
T 3b0p_A 147 AQSVEAMAEAGVKVFVVHARSALLALSTKANREIPPLRHDWVHRLKGDFP-QLTFVTNGGIRSLEEALFHLK-RVDGVML 224 (350)
T ss_dssp HHHHHHHHHTTCCEEEEECSCBC----------CCCCCHHHHHHHHHHCT-TSEEEEESSCCSHHHHHHHHT-TSSEEEE
T ss_pred HHHHHHHHHcCCCEEEEecCchhcccCcccccCCCcccHHHHHHHHHhCC-CCeEEEECCcCCHHHHHHHHh-CCCEEEE
Confidence 4456777888999999876321 11110 12556666666555 5777765 5789999999998 9886543
No 183
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=29.77 E-value=51 Score=28.79 Aligned_cols=36 Identities=8% Similarity=-0.147 Sum_probs=32.6
Q ss_pred CCCeEecCCCChHHHHHHHHcCCcEeecCCccccCc
Q psy14115 85 DKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTAR 120 (319)
Q Consensus 85 dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar 120 (319)
.++.++.++-+|.++-.++.+|||.+-+.+|....+
T Consensus 207 G~~v~~wTvn~~~~~~~l~~~GvdgI~TD~p~~~~~ 242 (247)
T 2otd_A 207 GLRILVYTVNKPQHAAELLRWGVDCICTDAIDVIGP 242 (247)
T ss_dssp TCEEEEECCCCHHHHHHHHHHTCSEEEESCTTTSCT
T ss_pred CCEEEEEccCCHHHHHHHHHcCCCEEEeCCHHHHHH
Confidence 578889999999999999999999999999987754
No 184
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=29.52 E-value=37 Score=29.99 Aligned_cols=35 Identities=14% Similarity=0.045 Sum_probs=31.7
Q ss_pred CCCeEecCCCChHHHHHHHHcCCcEeecCCccccC
Q psy14115 85 DKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTA 119 (319)
Q Consensus 85 dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~A 119 (319)
.++.++..+-+|.++-.++.+|||.+-+.+|.+..
T Consensus 210 G~~v~~WTvn~~~~~~~l~~~GVdgIiTD~P~~~~ 244 (252)
T 3qvq_A 210 GYKVLAFTINDESLALKLYNQGLDAVFSDYPQKIQ 244 (252)
T ss_dssp TCEEEEECCCCHHHHHHHHHTTCCEEEESSHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHcCCCEEEeCCHHHHH
Confidence 57888999999999999999999999999998753
No 185
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=29.16 E-value=1.4e+02 Score=28.08 Aligned_cols=67 Identities=18% Similarity=0.197 Sum_probs=39.6
Q ss_pred HHHHHHhCCCceEEeCCCCCC-CCHH-------HHHHHHHHhhcCCC-CCCCeEec-CCCChHHHHHHHHcCCcEee
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGG-EAKE-------DFWYSVLVSINCLP-KDKPRYVM-GIGFAVDLLICCALGADMFD 111 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~g-e~~~-------e~~~ii~~~~~~LP-~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD 111 (319)
-++.+.+.+++++.+|+-.+. .... -....+..+.+..+ .+.|...- |+.+|.++..++++|+|.+=
T Consensus 158 ~A~~l~~aGaD~I~VG~~~Gs~~~tr~~~g~g~p~~~~i~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~ 234 (361)
T 3khj_A 158 ATKELIENGADGIKVGIGPGSICTTRIVAGVGVPQITAIEKCSSVASKFGIPIIADGGIRYSGDIGKALAVGASSVM 234 (361)
T ss_dssp HHHHHHHTTCSEEEECSSCCTTCCHHHHTCBCCCHHHHHHHHHHHHHHHTCCEEEESCCCSHHHHHHHHHHTCSEEE
T ss_pred HHHHHHHcCcCEEEEecCCCcCCCcccccCCCCCcHHHHHHHHHHHhhcCCeEEEECCCCCHHHHHHHHHcCCCEEE
Confidence 356677789999998532111 0110 01222233322111 14677764 78999999999999999754
No 186
>1yxy_A Putative N-acetylmannosamine-6-phosphate 2-epimer; structural genomics, epimerase, PSI, structure initiative; 1.60A {Streptococcus pyogenes} SCOP: c.1.2.5
Probab=29.03 E-value=64 Score=27.72 Aligned_cols=64 Identities=6% Similarity=-0.122 Sum_probs=38.9
Q ss_pred HHHHHhCCCceE--EeCCCCCCCC--HHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 46 AHQMVEKDVNGF--AVGGLSGGEA--KEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 46 ~~~l~~~~~~G~--aIgGl~~ge~--~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
++...+.+++.+ .+.|...+.. ...-++.+..+.+. +.|...- |+.+|.++..+.+.|+|.+-.
T Consensus 146 a~~a~~~Gad~i~~~v~g~~~~~~~~~~~~~~~i~~~~~~---~ipvia~GGI~s~~~~~~~~~~Gad~v~v 214 (234)
T 1yxy_A 146 GLVAHQAGIDFVGTTLSGYTPYSRQEAGPDVALIEALCKA---GIAVIAEGKIHSPEEAKKINDLGVAGIVV 214 (234)
T ss_dssp HHHHHHTTCSEEECTTTTSSTTSCCSSSCCHHHHHHHHHT---TCCEEEESCCCSHHHHHHHHTTCCSEEEE
T ss_pred HHHHHHcCCCEEeeeccccCCCCcCCCCCCHHHHHHHHhC---CCCEEEECCCCCHHHHHHHHHCCCCEEEE
Confidence 444456677776 4555533210 00012334444442 5777775 688999999999999998754
No 187
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=28.92 E-value=1.6e+02 Score=26.33 Aligned_cols=72 Identities=11% Similarity=-0.010 Sum_probs=51.7
Q ss_pred CCHHHHHHHHHHHHhCCCceEEeCCCCCCC--C-HHHHHHHHHHhhcCCCCCCCeE-ecCCCChHHHHHHHHcCCcEeec
Q psy14115 37 LDEALRKDCAHQMVEKDVNGFAVGGLSGGE--A-KEDFWYSVLVSINCLPKDKPRY-VMGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 37 ~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge--~-~~e~~~ii~~~~~~LP~dkPr~-l~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+..+...+-++.|.+.+++-.-+|++...+ + ..+.++++..+.+. | ..++ ++. ....++-.+++.|+|.+-.
T Consensus 23 ~~~e~k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~-~--~~~v~~l~-~n~~~i~~a~~~G~~~V~i 98 (295)
T 1ydn_A 23 VPTADKIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRA-D--GVRYSVLV-PNMKGYEAAAAAHADEIAV 98 (295)
T ss_dssp CCHHHHHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCC-S--SSEEEEEC-SSHHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhC-C--CCEEEEEe-CCHHHHHHHHHCCCCEEEE
Confidence 677888899999999999999998875433 1 12456777776553 3 3344 443 6789999999999996543
No 188
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=28.75 E-value=1.9e+02 Score=27.44 Aligned_cols=66 Identities=21% Similarity=0.208 Sum_probs=38.7
Q ss_pred HHHHHhCCCceEEeCCCCCCCC--HH-------HHHHHHHHhhcCCC-CCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 46 AHQMVEKDVNGFAVGGLSGGEA--KE-------DFWYSVLVSINCLP-KDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 46 ~~~l~~~~~~G~aIgGl~~ge~--~~-------e~~~ii~~~~~~LP-~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
++.+.+.+++++.+|. ..|.. .. -....|..+.+..+ .+.|...- |+.+|.+|..++++|+|.+=.
T Consensus 163 A~~a~~aGAD~I~vG~-gpGs~~~tr~~~g~g~p~~~~l~~v~~~~~~~~iPVIA~GGI~~~~di~kala~GAd~V~v 239 (366)
T 4fo4_A 163 ARALIEAGVSAVKVGI-GPGSICTTRIVTGVGVPQITAIADAAGVANEYGIPVIADGGIRFSGDISKAIAAGASCVMV 239 (366)
T ss_dssp HHHHHHHTCSEEEECS-SCSTTBCHHHHHCCCCCHHHHHHHHHHHHGGGTCCEEEESCCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHcCCCEEEEec-CCCCCCCcccccCcccchHHHHHHHHHHHhhcCCeEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 4555667899999852 22211 00 01222222222111 14677664 789999999999999997643
No 189
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=28.74 E-value=42 Score=28.98 Aligned_cols=37 Identities=14% Similarity=-0.112 Sum_probs=32.6
Q ss_pred CCCCeEecCCCChHHHHHHHHcCCcEeecCCccccCc
Q psy14115 84 KDKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTAR 120 (319)
Q Consensus 84 ~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar 120 (319)
..++.++.++.+|.++-.++.+|||.+-+.+|....+
T Consensus 185 ~G~~v~~wtvn~~~~~~~l~~~GvdgI~TD~p~~~~~ 221 (224)
T 1vd6_A 185 RGLFVVAWTVNEEGEARRLLALGLDGLIGDRPEVLLP 221 (224)
T ss_dssp TTCEEEEECCCCHHHHHHHHHTTCSEEEESCHHHHTT
T ss_pred CCCEEEEEeCCCHHHHHHHHhcCCCEEEcCCHHHHHH
Confidence 3577899999999999999999999999999987643
No 190
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=28.57 E-value=1e+02 Score=31.28 Aligned_cols=78 Identities=12% Similarity=-0.034 Sum_probs=57.3
Q ss_pred ceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCC
Q psy14115 28 NIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGA 107 (319)
Q Consensus 28 ~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGv 107 (319)
.+.|.-.| ..++-. +-++.|.+.+++-+.|....+ ..+.+.+.++.+.+..| +.|...-.+.+++....++..|+
T Consensus 270 L~VgAAVg-v~~d~~-eR~~aLv~AGvD~iviD~ahG--hs~~v~~~i~~ik~~~p-~~~viaGNVaT~e~a~~Li~aGA 344 (556)
T 4af0_A 270 LYCGAAIG-TRPGDK-DRLKLLAEAGLDVVVLDSSQG--NSVYQIEFIKWIKQTYP-KIDVIAGNVVTREQAAQLIAAGA 344 (556)
T ss_dssp BCCEEEEC-SSHHHH-HHHHHHHHTTCCEEEECCSCC--CSHHHHHHHHHHHHHCT-TSEEEEEEECSHHHHHHHHHHTC
T ss_pred eeeEEEec-cCccHH-HHHHHHHhcCCcEEEEecccc--ccHHHHHHHHHHHhhCC-cceEEeccccCHHHHHHHHHcCC
Confidence 34444443 555533 345678889999999987643 34556778888887776 66777767899999999999999
Q ss_pred cEe
Q psy14115 108 DMF 110 (319)
Q Consensus 108 D~F 110 (319)
|.+
T Consensus 345 D~v 347 (556)
T 4af0_A 345 DGL 347 (556)
T ss_dssp SEE
T ss_pred CEE
Confidence 997
No 191
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=28.42 E-value=69 Score=27.63 Aligned_cols=63 Identities=14% Similarity=0.177 Sum_probs=40.1
Q ss_pred HHHHHHHhCCCceEEeCCCC-----CCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHc---CCcEeec
Q psy14115 44 DCAHQMVEKDVNGFAVGGLS-----GGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCAL---GADMFDC 112 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~-----~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~l---GvD~FD~ 112 (319)
+.++.+.+.+++.+.+-+.. .|-+ ++.+..+.+.+ +.|...- |+.+|.++..+.+. |+|.+-.
T Consensus 150 e~~~~~~~~G~~~i~~~~~~~~~~~~g~~----~~~~~~i~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gadgv~v 221 (244)
T 1vzw_A 150 ETLDRLNKEGCARYVVTDIAKDGTLQGPN----LELLKNVCAAT--DRPVVASGGVSSLDDLRAIAGLVPAGVEGAIV 221 (244)
T ss_dssp HHHHHHHHTTCCCEEEEEC-------CCC----HHHHHHHHHTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEE
T ss_pred HHHHHHHhCCCCEEEEeccCcccccCCCC----HHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHhhccCCCceeee
Confidence 34566666778776654432 1222 33444444443 4778875 68999999999999 9997654
No 192
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=27.83 E-value=68 Score=28.73 Aligned_cols=31 Identities=32% Similarity=0.274 Sum_probs=25.7
Q ss_pred CCCeEe-cCCCChHHHHHHHHcCCcEeecCCc
Q psy14115 85 DKPRYV-MGIGFAVDLLICCALGADMFDCVFP 115 (319)
Q Consensus 85 dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~~~P 115 (319)
+.|..+ .|+.+|+++..+++.|+|.+-....
T Consensus 178 ~iPviv~gGI~t~eda~~~~~~GAdgViVGSA 209 (264)
T 1xm3_A 178 KVPVIVDAGIGSPKDAAYAMELGADGVLLNTA 209 (264)
T ss_dssp SSCBEEESCCCSHHHHHHHHHTTCSEEEESHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHcCCCEEEEcHH
Confidence 678887 5899999999999999998755443
No 193
>3ta6_A Triosephosphate isomerase; HET: FLC; 1.41A {Mycobacterium tuberculosis} SCOP: c.1.1.0 PDB: 3tao_A* 3gvg_A
Probab=27.35 E-value=42 Score=30.82 Aligned_cols=31 Identities=29% Similarity=0.328 Sum_probs=24.4
Q ss_pred HHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhc
Q psy14115 48 QMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSIN 80 (319)
Q Consensus 48 ~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~ 80 (319)
-+...++||+.|||.|. ..++|.++++....
T Consensus 227 l~~~~diDG~LVGgASL--~~~~F~~Ii~~~~~ 257 (267)
T 3ta6_A 227 IVAQDDVDGGLVGGASL--DGEHFATLAAIAAG 257 (267)
T ss_dssp HHTSTTCCEEEECGGGG--SHHHHHHHHHHHHC
T ss_pred HhcCCCCCEEEechHhc--CHHHHHHHHHHHhc
Confidence 34456899999999875 68899999986543
No 194
>3l0g_A Nicotinate-nucleotide pyrophosphorylase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; 2.05A {Ehrlichia chaffeensis}
Probab=26.79 E-value=1.5e+02 Score=27.69 Aligned_cols=64 Identities=11% Similarity=0.027 Sum_probs=47.1
Q ss_pred HHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCccccCc
Q psy14115 49 MVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTAR 120 (319)
Q Consensus 49 l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar 120 (319)
..+.+.+...+..+ +++++.+++..+.. .-..-..|==+|.+|....+.|||.|..-..|..++
T Consensus 223 Al~aGaDiImLDn~----s~~~l~~av~~~~~----~v~leaSGGIt~~~i~~~A~tGVD~IsvGalthsa~ 286 (300)
T 3l0g_A 223 SLSNNVDMILLDNM----SISEIKKAVDIVNG----KSVLEVSGCVNIRNVRNIALTGVDYISIGCITNSFQ 286 (300)
T ss_dssp HHHTTCSEEEEESC----CHHHHHHHHHHHTT----SSEEEEESSCCTTTHHHHHTTTCSEEECGGGTSSCC
T ss_pred HHHcCCCEEEECCC----CHHHHHHHHHhhcC----ceEEEEECCCCHHHHHHHHHcCCCEEEeCccccCCC
Confidence 34468888888875 56888888876542 222334554589999999999999999888776664
No 195
>1zlp_A PSR132, petal death protein; TIM-barrel, helix swapping,2-ethyl-3-methylmalate lyase, 2-P methylmalate lyase, lyase/PEP mutase superfamily; 2.70A {Dianthus caryophyllus}
Probab=26.28 E-value=1.1e+02 Score=28.68 Aligned_cols=81 Identities=20% Similarity=0.183 Sum_probs=54.8
Q ss_pred HHHHHHhCCCceEEeCCCC-----CC------CCHHHHHHHHHHhhcCCCCCCCeEe---cCCCChHHHHH----HHHcC
Q psy14115 45 CAHQMVEKDVNGFAVGGLS-----GG------EAKEDFWYSVLVSINCLPKDKPRYV---MGIGFAVDLLI----CCALG 106 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~-----~g------e~~~e~~~ii~~~~~~LP~dkPr~l---~Gvg~P~~Il~----~V~lG 106 (319)
+++-+.+.+++...+||.+ .| -+.+++...+..+....| +.|..+ .|.|.|.++.. .++.|
T Consensus 51 sA~i~e~aGfdai~vs~~~~a~~~lG~pD~~~vt~~em~~~~~~I~r~~~-~~PviaD~d~Gyg~~~~v~~tv~~l~~aG 129 (318)
T 1zlp_A 51 SAAVVEKTGFHAAFVSGYSVSAAMLGLPDFGLLTTTEVVEATRRITAAAP-NLCVVVDGDTGGGGPLNVQRFIRELISAG 129 (318)
T ss_dssp HHHHHHHTTCSEEEECHHHHHHHHHCCCSSSCSCHHHHHHHHHHHHHHSS-SSEEEEECTTCSSSHHHHHHHHHHHHHTT
T ss_pred HHHHHHHcCCCEEEECcHHHhhHhcCCCCCCCCCHHHHHHHHHHHHhhcc-CCCEEEeCCCCCCCHHHHHHHHHHHHHcC
Confidence 5555666799999999842 12 346778777777777665 577776 47778987654 45678
Q ss_pred CcEe---ecCCccccCcCC-ccee
Q psy14115 107 ADMF---DCVFPTRTARFG-SALV 126 (319)
Q Consensus 107 vD~F---D~~~Ptr~Ar~G-~alt 126 (319)
++.+ |.+.|-+.+..| ..|+
T Consensus 130 aagv~iED~~~~k~cgH~~gk~L~ 153 (318)
T 1zlp_A 130 AKGVFLEDQVWPKKCGHMRGKAVV 153 (318)
T ss_dssp CCEEEEECBCSSCCCSSSSCCCBC
T ss_pred CcEEEECCCCCCccccCCCCCccC
Confidence 8865 777776666543 4444
No 196
>3gnn_A Nicotinate-nucleotide pyrophosphorylase; decode biostructures, ssgcid, niaid, SBRI, UWPPG, glycosyltransferase, transferase, structural genomics; 2.25A {Burkholderia pseudomallei}
Probab=26.17 E-value=1.4e+02 Score=27.67 Aligned_cols=66 Identities=12% Similarity=0.011 Sum_probs=46.6
Q ss_pred HHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCccccCc
Q psy14115 47 HQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTAR 120 (319)
Q Consensus 47 ~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar 120 (319)
++..+.++++.-+..+ +.+++.+.+..+ .++-+....|==++.+|....+.|||.|-.-..+..+.
T Consensus 223 ~eAl~aGaD~I~LDn~----~~~~l~~av~~i----~~~v~ieaSGGI~~~~i~~~a~tGVD~isvG~lt~sa~ 288 (298)
T 3gnn_A 223 RTALAHGARSVLLDNF----TLDMMRDAVRVT----EGRAVLEVSGGVNFDTVRAIAETGVDRISIGALTKDVR 288 (298)
T ss_dssp HHHHHTTCEEEEEESC----CHHHHHHHHHHH----TTSEEEEEESSCSTTTHHHHHHTTCSEEECGGGGTSCC
T ss_pred HHHHHcCCCEEEECCC----CHHHHHHHHHHh----CCCCeEEEEcCCCHHHHHHHHHcCCCEEEECCeecCCC
Confidence 3444568888888875 567888887765 22233344565589999999999999998877665543
No 197
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=26.12 E-value=40 Score=29.72 Aligned_cols=35 Identities=14% Similarity=0.044 Sum_probs=31.7
Q ss_pred CCCeEecCCCChHHHHHHHHcCCcEeecCCccccC
Q psy14115 85 DKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTA 119 (319)
Q Consensus 85 dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~A 119 (319)
.++.++..+-+|.++-.++.+|||.+-+.+|.+..
T Consensus 204 G~~V~~WTvn~~~~~~~l~~~GVDgIiTD~P~~~~ 238 (250)
T 3ks6_A 204 GLDFGCWAAHTPSQITKALDLGVKVFTTDRPTLAI 238 (250)
T ss_dssp TCEEEEECCCSHHHHHHHHHHTCSEEEESCHHHHH
T ss_pred CCEEEEEeCCCHHHHHHHHHcCCCEEEcCCHHHHH
Confidence 57889999999999999999999999999998753
No 198
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=25.90 E-value=1.5e+02 Score=27.47 Aligned_cols=71 Identities=20% Similarity=0.284 Sum_probs=46.2
Q ss_pred HHHHHHHhCCCceEEeCCCC---------C---------CCCHHH----HHHHHHHhhcCCCCCCCeEe-cCC------C
Q psy14115 44 DCAHQMVEKDVNGFAVGGLS---------G---------GEAKED----FWYSVLVSINCLPKDKPRYV-MGI------G 94 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~---------~---------ge~~~e----~~~ii~~~~~~LP~dkPr~l-~Gv------g 94 (319)
++++...+.+|+|+-|-+-. . |-+.+. ..++|+.+++.++++.|.-+ ++. |
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGGslenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~g 235 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGGSLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEGG 235 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSSSHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTTS
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCCC
Confidence 45566667899998876533 1 223332 36788999999999998765 222 2
Q ss_pred -ChHHHH----HHHHcCCcEeecCC
Q psy14115 95 -FAVDLL----ICCALGADMFDCVF 114 (319)
Q Consensus 95 -~P~~Il----~~V~lGvD~FD~~~ 114 (319)
++.+.+ .+.+.|+|.++.+.
T Consensus 236 ~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 236 WSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEec
Confidence 444532 34468999999764
No 199
>1qpo_A Quinolinate acid phosphoribosyl transferase; type II prtase, de novo NAD biosynthesis, PRPP, phosphoribos transferase; 2.40A {Mycobacterium tuberculosis H37RV} SCOP: c.1.17.1 d.41.2.1 PDB: 1qpn_A 1qpq_A* 1qpr_A*
Probab=25.73 E-value=1.6e+02 Score=26.88 Aligned_cols=71 Identities=11% Similarity=-0.075 Sum_probs=51.4
Q ss_pred HHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCccccCc
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTAR 120 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar 120 (319)
-+++..+.+.+.+.+..+ +++++.+.++.+....| .-+.-+.|==+|.+|....+.|||.|-....+..+.
T Consensus 206 ea~eal~aGaD~I~LDn~----~~~~~~~~v~~l~~~~~-~v~ieaSGGIt~~~i~~~a~tGVD~isvG~l~~~a~ 276 (284)
T 1qpo_A 206 QLDAVLPEKPELILLDNF----AVWQTQTAVQRRDSRAP-TVMLESSGGLSLQTAATYAETGVDYLAVGALTHSVR 276 (284)
T ss_dssp HHHHHGGGCCSEEEEETC----CHHHHHHHHHHHHHHCT-TCEEEEESSCCTTTHHHHHHTTCSEEECGGGTSSBC
T ss_pred HHHHHHHcCCCEEEECCC----CHHHHHHHHHHhhccCC-CeEEEEECCCCHHHHHHHHhcCCCEEEECHHHcCCC
Confidence 444555678888888885 56888888887665333 334555664589999999999999998777666554
No 200
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=25.33 E-value=1e+02 Score=27.28 Aligned_cols=77 Identities=18% Similarity=0.166 Sum_probs=57.0
Q ss_pred CceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCC---ChHHHHHHH
Q psy14115 27 QNIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIG---FAVDLLICC 103 (319)
Q Consensus 27 q~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg---~P~~Il~~V 103 (319)
+.+.+|+-| .+++.=..-++.+.+-++..+-|---+ ..-.+.|..+.+.+|. .+.|.| ++++.-.++
T Consensus 13 ~~vi~Vir~-~~~~~a~~~a~al~~gGi~~iEvt~~t-----~~a~~~I~~l~~~~p~----~~IGAGTVlt~~~a~~ai 82 (217)
T 3lab_A 13 KPLIPVIVI-DDLVHAIPMAKALVAGGVHLLEVTLRT-----EAGLAAISAIKKAVPE----AIVGAGTVCTADDFQKAI 82 (217)
T ss_dssp CSEEEEECC-SCGGGHHHHHHHHHHTTCCEEEEETTS-----TTHHHHHHHHHHHCTT----SEEEEECCCSHHHHHHHH
T ss_pred CCEEEEEEc-CCHHHHHHHHHHHHHcCCCEEEEeCCC-----ccHHHHHHHHHHHCCC----CeEeeccccCHHHHHHHH
Confidence 579999997 788877888999999999988884321 2234555666666663 344654 699999999
Q ss_pred HcCCcEeecC
Q psy14115 104 ALGADMFDCV 113 (319)
Q Consensus 104 ~lGvD~FD~~ 113 (319)
..|.|.+-++
T Consensus 83 ~AGA~fivsP 92 (217)
T 3lab_A 83 DAGAQFIVSP 92 (217)
T ss_dssp HHTCSEEEES
T ss_pred HcCCCEEEeC
Confidence 9999998664
No 201
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=25.30 E-value=1.8e+02 Score=32.90 Aligned_cols=68 Identities=22% Similarity=0.166 Sum_probs=44.0
Q ss_pred HHHHHhCCCceEEeCCCCCCC-------------CHHHHH-HHHHHhhc-CCCCCCCeEec-CCCChHHHHHHHHcCCcE
Q psy14115 46 AHQMVEKDVNGFAVGGLSGGE-------------AKEDFW-YSVLVSIN-CLPKDKPRYVM-GIGFAVDLLICCALGADM 109 (319)
Q Consensus 46 ~~~l~~~~~~G~aIgGl~~ge-------------~~~e~~-~ii~~~~~-~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~ 109 (319)
++.+.+.+++++.|.|..+|- +..... ++.+.+.. .+..+-|.... |+.++.||+.++++|+|.
T Consensus 1010 A~~a~~AGAD~IvVsG~eGGTgasp~~~~~~~G~Pt~~aL~ev~~al~~~glr~~VpVIAdGGIrtG~DVakALaLGAda 1089 (1479)
T 1ea0_A 1010 AAGVAKANADIILISGNSGGTGASPQTSIKFAGLPWEMGLSEVHQVLTLNRLRHRVRLRTDGGLKTGRDIVIAAMLGAEE 1089 (1479)
T ss_dssp HHHHHHTTCSEEEEECTTCCCSSEETTHHHHSCCCHHHHHHHHHHHHHTTTCTTTSEEEEESSCCSHHHHHHHHHTTCSE
T ss_pred HHHHHHcCCcEEEEcCCCCCCCCCchhhhcCCchhHHHHHHHHHHHHHHcCCCCCceEEEECCCCCHHHHHHHHHcCCCe
Confidence 456677899999998775442 222222 22222211 23345667766 689999999999999997
Q ss_pred eecC
Q psy14115 110 FDCV 113 (319)
Q Consensus 110 FD~~ 113 (319)
+-.-
T Consensus 1090 V~iG 1093 (1479)
T 1ea0_A 1090 FGIG 1093 (1479)
T ss_dssp EECC
T ss_pred eeEc
Confidence 6543
No 202
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=25.07 E-value=1.5e+02 Score=29.13 Aligned_cols=89 Identities=15% Similarity=0.042 Sum_probs=59.6
Q ss_pred CCceeeec--------cCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCC------CHHHHHHH---HHHhhcCCCC---C
Q psy14115 26 TQNIFPIV--------QGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGE------AKEDFWYS---VLVSINCLPK---D 85 (319)
Q Consensus 26 ~q~lfgiV--------qGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge------~~~e~~~i---i~~~~~~LP~---d 85 (319)
...+.||+ -||.+.+.-.+-++++.+.|.+-+=|||-|... ..+|+.++ |+.+.+..|. +
T Consensus 190 ~~~vMGIlNvTPDSFsDgg~~~~~al~~A~~mv~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~ 269 (442)
T 3mcm_A 190 NTIRMGIVNLSNQSFSDGNFDDNQRKLNLDELIQSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYK 269 (442)
T ss_dssp SSEEEEEEECSSCC-CCCSSCCCHHHHHHHHHHHHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSC
T ss_pred CceEEEEEeCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCC
Confidence 34566665 355666667778888999999999999865421 24566664 5555552222 3
Q ss_pred CCeEecCCCChHHHHHHHH--cCCcE-eecCCc
Q psy14115 86 KPRYVMGIGFAVDLLICCA--LGADM-FDCVFP 115 (319)
Q Consensus 86 kPr~l~Gvg~P~~Il~~V~--lGvD~-FD~~~P 115 (319)
.| ...-.-.|.-+-.|++ .|+|| +-++.-
T Consensus 270 vp-ISIDT~~~~VaeaAL~~~aGa~i~INDVsg 301 (442)
T 3mcm_A 270 PL-VSIDTRKLEVMQKILAKHHDIIWMINDVEC 301 (442)
T ss_dssp CE-EEEECCCHHHHHHHHHHHGGGCCEEEECCC
T ss_pred Ce-EEEeCCCHHHHHHHHhhCCCCCEEEEcCCC
Confidence 33 3335567988999999 99999 866654
No 203
>2ztj_A Homocitrate synthase; (beta/alpha)8 TIM barrel, substrate complex, amino-acid BIOS lysine biosynthesis, transferase; HET: AKG; 1.80A {Thermus thermophilus} PDB: 2ztk_A* 2zyf_A* 3a9i_A*
Probab=25.01 E-value=1.2e+02 Score=28.81 Aligned_cols=73 Identities=11% Similarity=-0.040 Sum_probs=50.4
Q ss_pred CCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeecC
Q psy14115 36 GLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 36 G~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
.+..+...+-++.|.+.|++-.-+|.... ++. ..+.++.+.+..+. ++.+ +..+.+.+|-.+++.|+|.+...
T Consensus 21 ~~~~~~k~~ia~~L~~~Gv~~IE~g~p~~--~~~-~~~~~~~i~~~~~~--~~v~~~~r~~~~di~~a~~~g~~~v~i~ 94 (382)
T 2ztj_A 21 NFSTQDKVEIAKALDEFGIEYIEVTTPVA--SPQ-SRKDAEVLASLGLK--AKVVTHIQCRLDAAKVAVETGVQGIDLL 94 (382)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEECCTTS--CHH-HHHHHHHHHTSCCS--SEEEEEEESCHHHHHHHHHTTCSEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCcCEEEEcCCcC--CHH-HHHHHHHHHhcCCC--cEEEEEcccChhhHHHHHHcCCCEEEEE
Confidence 36778888899999999999999987432 333 33445555544332 3433 45578999999999999965433
No 204
>4dbe_A Orotidine 5'-phosphate decarboxylase; TIM barrel, orotidine 5'-monophosphate decarboxylase, inhibi lyase-lyase inhibitor complex; HET: BMP; 1.79A {Sulfolobus solfataricus}
Probab=24.88 E-value=52 Score=29.00 Aligned_cols=68 Identities=18% Similarity=0.047 Sum_probs=38.3
Q ss_pred HHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChH-HHHHHHHcCCcEeecCCccccC
Q psy14115 43 KDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAV-DLLICCALGADMFDCVFPTRTA 119 (319)
Q Consensus 43 ~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~-~Il~~V~lGvD~FD~~~Ptr~A 119 (319)
.+.++...+.+.+|+..++. .+++. ..+++.+|. .....+|++... +.-.++..|.|.+-.--|...|
T Consensus 125 ~~~a~~a~~~g~~GvV~sat----~p~e~----~~ir~~~~~-~~~vtPGI~~~g~tp~~a~~~Gad~iVVGR~I~~A 193 (222)
T 4dbe_A 125 DYIKNVIREISPKGIVVGGT----KLDHI----TQYRRDFEK-MTIVSPGMGSQGGSYGDAVCAGADYEIIGRSIYNA 193 (222)
T ss_dssp HHHHHHHHHHCCSEEEECTT----CHHHH----HHHHHHCTT-CEEEECCBSTTSBCTTHHHHHTCSEEEECHHHHTS
T ss_pred HHHHHHHHHhCCCEEEECCC----CHHHH----HHHHHhCCC-CEEEcCCcccCccCHHHHHHcCCCEEEECHHhcCC
Confidence 34445455678999988773 23333 233444564 445567885211 2335568999987654444433
No 205
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=24.68 E-value=2e+02 Score=25.88 Aligned_cols=71 Identities=10% Similarity=-0.156 Sum_probs=47.7
Q ss_pred CHHHHHHHHHHHHhCCCceEEeCCCC-CCCCHHHHHHHHHHhhcCCCCCCCeE-ecCCCChHHHHHHHHcCCcEee
Q psy14115 38 DEALRKDCAHQMVEKDVNGFAVGGLS-GGEAKEDFWYSVLVSINCLPKDKPRY-VMGIGFAVDLLICCALGADMFD 111 (319)
Q Consensus 38 ~~dlR~~s~~~l~~~~~~G~aIgGl~-~ge~~~e~~~ii~~~~~~LP~dkPr~-l~Gvg~P~~Il~~V~lGvD~FD 111 (319)
.++.-.+.++++.+.++..+.+.|-. +..+.+.+.++++.+.+. +.... -.|.-+++.+-.+...|+|.+-
T Consensus 85 s~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~---~~~i~~s~g~l~~e~l~~L~~ag~~~v~ 157 (348)
T 3iix_A 85 TPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKM---GVAVTLSLGEWPREYYEKWKEAGADRYL 157 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTT---SCEEEEECCCCCHHHHHHHHHHTCCEEE
T ss_pred CHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhc---CceEEEecCCCCHHHHHHHHHhCCCEEe
Confidence 55666667777888889888886521 112236678888887765 33233 2455678888888899999764
No 206
>3tqv_A Nicotinate-nucleotide pyrophosphorylase; glycosyltransferase, transferase; 2.62A {Francisella tularensis subsp}
Probab=24.51 E-value=1.3e+02 Score=27.76 Aligned_cols=65 Identities=14% Similarity=0.087 Sum_probs=47.8
Q ss_pred HHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCccccCc
Q psy14115 48 QMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTAR 120 (319)
Q Consensus 48 ~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~Ar 120 (319)
+..+.+.++..+..+ +++++.++++.+. .+-+.-..|==+|.+|....+.|||.|..-..|..++
T Consensus 213 eAl~aGaD~I~LDn~----~~~~l~~av~~~~----~~v~ieaSGGIt~~~i~~~a~tGVD~IsvGalt~sa~ 277 (287)
T 3tqv_A 213 QAIAAKADIVMLDNF----SGEDIDIAVSIAR----GKVALEVSGNIDRNSIVAIAKTGVDFISVGAITKHIK 277 (287)
T ss_dssp HHHHTTCSEEEEESC----CHHHHHHHHHHHT----TTCEEEEESSCCTTTHHHHHTTTCSEEECSHHHHSBC
T ss_pred HHHHcCCCEEEEcCC----CHHHHHHHHHhhc----CCceEEEECCCCHHHHHHHHHcCCCEEEEChhhcCCc
Confidence 334568888888875 5678888887654 2333445565589999999999999999887776654
No 207
>3kxq_A Triosephosphate isomerase; ssgcid, NIH, niaid, SBRI, UW, gluconeogenesis, glycolysis, pentose shunt; 1.60A {Bartonella henselae}
Probab=24.30 E-value=48 Score=30.56 Aligned_cols=28 Identities=32% Similarity=0.313 Sum_probs=22.5
Q ss_pred HHhCCCceEEeCCCCCCCCHHHHHHHHHHh
Q psy14115 49 MVEKDVNGFAVGGLSGGEAKEDFWYSVLVS 78 (319)
Q Consensus 49 l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~ 78 (319)
+...++||+.|||.|. +.++|.++++..
T Consensus 245 ~~~~dIDG~LVGgASL--~~~~F~~Ii~~~ 272 (275)
T 3kxq_A 245 LSTAHVNGALIGGASL--KAIDFLTICDVY 272 (275)
T ss_dssp HTSTTCCEEEESGGGS--SHHHHHHHHGGG
T ss_pred HcCCccceEEeehhhc--CHHHHHHHHHHH
Confidence 3346899999999875 688999999754
No 208
>2btm_A TIM, protein (triosephosphate isomerase); thermophilic triose-phosphate, glycolysis; 2.40A {Geobacillus stearothermophilus} SCOP: c.1.1.1 PDB: 1btm_A
Probab=24.15 E-value=31 Score=31.46 Aligned_cols=42 Identities=24% Similarity=0.362 Sum_probs=29.1
Q ss_pred eeccCC-CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHH
Q psy14115 31 PIVQGG-LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLV 77 (319)
Q Consensus 31 giVqGG-~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~ 77 (319)
-|+-|| ..+ .-+.+-+.+.+++|+.+||.+. ..++|.++++.
T Consensus 206 rIlYGGSV~~---~N~~~l~~~~diDG~LVGgAsL--~a~~F~~Ii~~ 248 (252)
T 2btm_A 206 RIQYGGSVKP---DNIRDFLAQQQIDGALVGGASL--EPASFLQLVEA 248 (252)
T ss_dssp EEEEESSCCT---TTHHHHHTSTTCCEEEESGGGS--SHHHHHHHHHT
T ss_pred eEEEcCCCCH---HHHHHHHcCCCCCeeEecHHHh--ChHHHHHHHHH
Confidence 355555 444 2344444578999999999875 67889999875
No 209
>3ve9_A Orotidine-5'-phosphate decarboxylase; TIM barrel fold, orotidine 5'-monopho decarboxylase, lyase; 1.45A {Metallosphaera sedula} PDB: 3ve7_A
Probab=23.91 E-value=54 Score=28.80 Aligned_cols=70 Identities=16% Similarity=0.019 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEecCCCChH--HHHHHHHcCCcEeecCCccc
Q psy14115 40 ALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVMGIGFAV--DLLICCALGADMFDCVFPTR 117 (319)
Q Consensus 40 dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg~P~--~Il~~V~lGvD~FD~~~Ptr 117 (319)
++-.+.++...+.+.+|++.++. .+++. ..+++..|. ......|++. + ++-.++..|.|.+-.--|..
T Consensus 115 ~~v~~~a~~a~~~G~~GvV~sat----~~~e~----~~ir~~~~~-f~~v~pGI~~-~g~~~~~a~~~Gad~iVvGr~I~ 184 (215)
T 3ve9_A 115 AFYPYLREVARRVNPKGFVAPAT----RPSMI----SRVKGDFPD-KLVISPGVGT-QGAKPGIALCHGADYEIVGRSVY 184 (215)
T ss_dssp GGHHHHHHHHHHHCCSEEECCTT----SHHHH----HHHHHHCTT-SEEEECCTTS-TTCCTTHHHHTTCSEEEECHHHH
T ss_pred HHHHHHHHHHHHcCCCceeeCCC----CHHHH----HHHHHhCCC-cEEEcCCCCc-CcCCHHHHHHcCCCEEEeCHHHc
Confidence 33444444445568999987763 23333 234444564 3333478852 2 34567788999876655544
Q ss_pred cC
Q psy14115 118 TA 119 (319)
Q Consensus 118 ~A 119 (319)
.|
T Consensus 185 ~a 186 (215)
T 3ve9_A 185 QS 186 (215)
T ss_dssp TS
T ss_pred CC
Confidence 44
No 210
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=23.91 E-value=47 Score=29.07 Aligned_cols=35 Identities=14% Similarity=0.120 Sum_probs=31.4
Q ss_pred CCCeEecCCCChHHHHHHHHcCCcEeecCCccccC
Q psy14115 85 DKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTA 119 (319)
Q Consensus 85 dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~A 119 (319)
.++.++..+-+|.++-.++.+|||.+-+.+|.+..
T Consensus 196 G~~v~~WTVn~~~~~~~l~~~GVdgIiTD~P~~~~ 230 (238)
T 3no3_A 196 GMTSNVWTVDDPKLMEEMIDMGVDFITTDLPEETQ 230 (238)
T ss_dssp TCEEEEECCCSHHHHHHHHHHTCSEEEESCHHHHH
T ss_pred CCEEEEECCCCHHHHHHHHHcCCCEEECCCHHHHH
Confidence 57788899999999999999999999999998653
No 211
>3cwo_X Beta/alpha-barrel protein based on 1THF and 1TMY; XRAY, CHEY, HISF, half barrel, de novo protein; 3.10A {Thermotoga maritima} PDB: 2lle_A
Probab=23.74 E-value=1.3e+02 Score=24.72 Aligned_cols=64 Identities=13% Similarity=0.052 Sum_probs=38.4
Q ss_pred HHHHHHhCCCceEEeCCC-CCCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEe
Q psy14115 45 CAHQMVEKDVNGFAVGGL-SGGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMF 110 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl-~~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~F 110 (319)
.++.+...+.+-+.+-|. ..|..+.--.+.+....... +.|...+ |++.|.++..+...|+|-+
T Consensus 135 ~i~~~~~~~~~~vli~~~~~~g~~~g~~~~~i~~~~~~~--~~Pvia~~g~~~~~~~~~~~~~G~~~~ 200 (237)
T 3cwo_X 135 WVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADAA 200 (237)
T ss_dssp HHHHHHHHTCSEEEEEETTTTTCCSCCCHHHHHHHGGGC--CSCEEEESCCCSHHHHHHHHHHTCSEE
T ss_pred HHHHHhhcCCCeEEEEecCCCCccccccHHHHHHHHHhc--CCCEEecCCCCCHHHHHHHHHcCcHHH
Confidence 344555556664544442 11111111155666655543 6888876 6789999999999999854
No 212
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=23.57 E-value=79 Score=29.09 Aligned_cols=40 Identities=15% Similarity=-0.016 Sum_probs=33.9
Q ss_pred HHHHHHHhhcCCCCCCCeEecCC---CChHHHHHHHHcCCcEeecC
Q psy14115 71 FWYSVLVSINCLPKDKPRYVMGI---GFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 71 ~~~ii~~~~~~LP~dkPr~l~Gv---g~P~~Il~~V~lGvD~FD~~ 113 (319)
.+++|+.+++ . ++|..+-++ -+|++...+.+.|+|.++.+
T Consensus 170 ~~~~i~~vr~-~--~~Pv~vK~v~~g~~~e~a~~~~~~G~d~I~vs 212 (332)
T 1vcf_A 170 LVERLAELLP-L--PFPVMVKEVGHGLSREAALALRDLPLAAVDVA 212 (332)
T ss_dssp HHHHHHHHCS-C--SSCEEEECSSSCCCHHHHHHHTTSCCSEEECC
T ss_pred HHHHHHHHHc-C--CCCEEEEecCCCCCHHHHHHHHHcCCCEEEeC
Confidence 6788998888 6 589888666 68999999999999999875
No 213
>4g1k_A Triosephosphate isomerase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel, TPIA; 2.35A {Burkholderia thailandensis}
Probab=23.56 E-value=45 Score=30.73 Aligned_cols=27 Identities=26% Similarity=0.326 Sum_probs=21.6
Q ss_pred HHhCCCceEEeCCCCCCCCHHHHHHHHHH
Q psy14115 49 MVEKDVNGFAVGGLSGGEAKEDFWYSVLV 77 (319)
Q Consensus 49 l~~~~~~G~aIgGl~~ge~~~e~~~ii~~ 77 (319)
+...++||+.|||.|. +.++|.++++.
T Consensus 244 ~~~~dIDG~LVGgASL--~~~~F~~Ii~~ 270 (272)
T 4g1k_A 244 FGQPDIDGGLIGGASL--KSGDFLAICRA 270 (272)
T ss_dssp HTSTTCCEEEECGGGG--SHHHHHHHHHT
T ss_pred hcCCCCCEEEechHhc--CHHHHHHHHhh
Confidence 3346899999999875 67899999864
No 214
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=23.53 E-value=1.1e+02 Score=26.23 Aligned_cols=63 Identities=19% Similarity=0.225 Sum_probs=40.6
Q ss_pred HHHHHHHhCCCceEEeCCCC-----CCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHc---CCcEeec
Q psy14115 44 DCAHQMVEKDVNGFAVGGLS-----GGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCAL---GADMFDC 112 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~-----~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~l---GvD~FD~ 112 (319)
+.++.+.+.+++.+.+-+.. .|.+ ++.+..+.+.+ +.|...- |+.+|+++..+.+. |+|.+=.
T Consensus 153 e~~~~~~~~G~~~i~~~~~~~~~~~~g~~----~~~~~~l~~~~--~ipvia~GGI~~~~d~~~~~~~~~~Gad~v~v 224 (244)
T 2y88_A 153 DVLERLDSEGCSRFVVTDITKDGTLGGPN----LDLLAGVADRT--DAPVIASGGVSSLDDLRAIATLTHRGVEGAIV 224 (244)
T ss_dssp HHHHHHHHTTCCCEEEEETTTTTTTSCCC----HHHHHHHHTTC--SSCEEEESCCCSHHHHHHHHTTGGGTEEEEEE
T ss_pred HHHHHHHhCCCCEEEEEecCCccccCCCC----HHHHHHHHHhC--CCCEEEECCCCCHHHHHHHHhhccCCCCEEEE
Confidence 34556666788877764432 1223 33444444433 5788775 68999999999998 9997543
No 215
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=23.46 E-value=1.1e+02 Score=26.54 Aligned_cols=65 Identities=14% Similarity=0.069 Sum_probs=42.7
Q ss_pred HHHHHHHhCCCceEEeCCCCC-CCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEe
Q psy14115 44 DCAHQMVEKDVNGFAVGGLSG-GEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMF 110 (319)
Q Consensus 44 ~s~~~l~~~~~~G~aIgGl~~-ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~F 110 (319)
+.++.+.+.+++.+.+-+... +.......+.+..+.+.. +.|..+. |+.++.++..+.+.|+|.+
T Consensus 34 ~~a~~~~~~Ga~~i~v~d~~~~~~~~g~~~~~i~~i~~~~--~iPvi~~ggi~~~~~i~~~~~~Gad~v 100 (266)
T 2w6r_A 34 DWVVEVEKRGAGEILLTSIDRDGTKSGYDTEMIRFVRPLT--TLPIIASGGAGKMEHFLEAFLAGADKA 100 (266)
T ss_dssp HHHHHHHHHTCSEEEEEETTTSSCSSCCCHHHHHHHGGGC--CSCEEEESCCCSTHHHHHHHHHTCSEE
T ss_pred HHHHHHHHCCCCEEEEEecCcccCCCcccHHHHHHHHHhc--CCCEEEECCCCCHHHHHHHHHcCCcHh
Confidence 456667777888888755431 111111245555555543 4788886 5689999999999999964
No 216
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=23.28 E-value=63 Score=28.52 Aligned_cols=35 Identities=11% Similarity=0.026 Sum_probs=31.2
Q ss_pred CCCeEecCCCChHHHHHHHHcCCcEeecCCccccC
Q psy14115 85 DKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTA 119 (319)
Q Consensus 85 dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~A 119 (319)
.++.++.++-+|.++..++.+|||.+-+.+|....
T Consensus 236 Gl~v~~wTvn~~~~~~~l~~~GvdgIiTD~P~~~~ 270 (272)
T 3ch0_A 236 GMRVIPWTVNTKEEIETLISLGVDGIITDYPDLFF 270 (272)
T ss_dssp TCEECCBCCCSHHHHHHHHHHTCSEEEESCGGGGT
T ss_pred CCEEEEeccCCHHHHHHHHHcCCCEEEeCCHHHHh
Confidence 56788889999999999999999999999998753
No 217
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=23.02 E-value=68 Score=29.66 Aligned_cols=97 Identities=18% Similarity=0.204 Sum_probs=53.1
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCceeeeccCC-----------CCHHHHHHHHHHHHhCCCceEEeC-----CCCCCCC
Q psy14115 4 AIAKDRTVRWLDRCLAAHRNPTTQNIFPIVQGG-----------LDEALRKDCAHQMVEKDVNGFAVG-----GLSGGEA 67 (319)
Q Consensus 4 ~~av~RT~rWl~r~~~~~~~~~~q~lfgiVqGG-----------~~~dlR~~s~~~l~~~~~~G~aIg-----Gl~~ge~ 67 (319)
++-+++|.+.++.|-..--. -..-.|.|.|. .+|+ ++.+...+.+++-+|+. |.-.|++
T Consensus 117 eeNi~~Tk~vv~~ah~~gvs--VEaElG~vgG~Ed~~~~~~~~yT~Pe---ea~~Fv~~TgvD~LAvaiGt~HG~Y~~~p 191 (288)
T 3q94_A 117 EENVETTKKVVEYAHARNVS--VEAELGTVGGQEDDVIAEGVIYADPA---ECKHLVEATGIDCLAPALGSVHGPYKGEP 191 (288)
T ss_dssp HHHHHHHHHHHHHHHTTTCE--EEEEESBCBCSCSSCGGGGCBCCCHH---HHHHHHHHHCCSEEEECSSCBSSCCSSSC
T ss_pred HHHHHHHHHHHHHHHHcCCe--EEEEeeeeccccCCcCCccccCCCHH---HHHHHHHHHCCCEEEEEcCcccCCcCCCC
Confidence 55677777777766422100 01123444432 3333 44455556788888754 3222322
Q ss_pred HHHHHHHHHHhhcCCCCCCCeEecCC-CChHH-HHHHHHcCCc
Q psy14115 68 KEDFWYSVLVSINCLPKDKPRYVMGI-GFAVD-LLICCALGAD 108 (319)
Q Consensus 68 ~~e~~~ii~~~~~~LP~dkPr~l~Gv-g~P~~-Il~~V~lGvD 108 (319)
.--.+.|+.+.+.+| -|.-+.|- |.|.+ |..||.+||=
T Consensus 192 -~Ld~~~L~~I~~~v~--vpLVlHGgSG~~~e~i~~ai~~Gv~ 231 (288)
T 3q94_A 192 -NLGFAEMEQVRDFTG--VPLVLHGGTGIPTADIEKAISLGTS 231 (288)
T ss_dssp -CCCHHHHHHHHHHHC--SCEEECCCTTCCHHHHHHHHHTTEE
T ss_pred -ccCHHHHHHHHHhcC--CCEEEeCCCCCCHHHHHHHHHcCCe
Confidence 222334444444444 78888875 77766 8899999874
No 218
>1yya_A Triosephosphate isomerase; riken structural genomics/proteom initiative, RSGI, structural genomics; 1.60A {Thermus thermophilus}
Probab=23.02 E-value=39 Score=30.69 Aligned_cols=41 Identities=27% Similarity=0.396 Sum_probs=28.0
Q ss_pred eeccCC-CCHHHHHHHHHHHHh-CCCceEEeCCCCCCCCHHHHHHHHHH
Q psy14115 31 PIVQGG-LDEALRKDCAHQMVE-KDVNGFAVGGLSGGEAKEDFWYSVLV 77 (319)
Q Consensus 31 giVqGG-~~~dlR~~s~~~l~~-~~~~G~aIgGl~~ge~~~e~~~ii~~ 77 (319)
-|+-|| ..+ .-++++.+ .+++|+.+||.+. ..++|.++++.
T Consensus 206 rIlYGGSV~~----~N~~~l~~~~diDG~LVGgAsL--~a~~F~~ii~~ 248 (250)
T 1yya_A 206 RILYGGSVNP----KNFADLLSMPNVDGGLVGGASL--ELESFLALLRI 248 (250)
T ss_dssp EEEEESSCCT----TTHHHHHTSTTCCEEEESGGGS--SHHHHHHHHHH
T ss_pred eEEEcCCCCH----HHHHHHHcCCCCCeeEeeHHHh--ChHHHHHHHHh
Confidence 355555 444 23444554 5999999999875 67889998874
No 219
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=22.96 E-value=3e+02 Score=25.13 Aligned_cols=28 Identities=32% Similarity=0.412 Sum_probs=23.0
Q ss_pred CCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 85 DKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 85 dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
+.|..+= |+++|.|+..+.++|+|-+=.
T Consensus 187 ~vPVI~eGGI~TPsDAa~AmeLGAdgVlV 215 (265)
T 1wv2_A 187 KVPVLVDAGVGTASDAAIAMELGCEAVLM 215 (265)
T ss_dssp SSCBEEESCCCSHHHHHHHHHHTCSEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHHHcCCCEEEE
Confidence 4567764 899999999999999997543
No 220
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=22.83 E-value=53 Score=29.94 Aligned_cols=35 Identities=17% Similarity=0.119 Sum_probs=31.7
Q ss_pred CCCeEecCCCChHHHHHHHHcCCcEeecCCccccC
Q psy14115 85 DKPRYVMGIGFAVDLLICCALGADMFDCVFPTRTA 119 (319)
Q Consensus 85 dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~Ptr~A 119 (319)
.++.++..|-+|.++-.++.+|||.+-+.+|.+..
T Consensus 268 Gl~V~~WTVn~~~~~~~l~~~GVDgIiTD~P~~~~ 302 (313)
T 3l12_A 268 GLIVLTWTVNEPEDIRRMATTGVDGIVTDYPGRTQ 302 (313)
T ss_dssp TCEEEEBCCCSHHHHHHHHHHTCSEEEESCHHHHH
T ss_pred CCEEEEEcCCCHHHHHHHHHcCCCEEEeCCHHHHH
Confidence 57889999999999999999999999999998753
No 221
>1m6j_A TIM, TPI, triosephosphate isomerase; asymmetry, monomer stability; 1.50A {Entamoeba histolytica} SCOP: c.1.1.1
Probab=22.77 E-value=54 Score=29.90 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=25.2
Q ss_pred HHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhc
Q psy14115 46 AHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSIN 80 (319)
Q Consensus 46 ~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~ 80 (319)
.+-+.+.++||+.|||.+. ..++|.++++...+
T Consensus 227 ~~l~~~~diDG~LVGgAsL--~a~~F~~ii~~~~~ 259 (261)
T 1m6j_A 227 NELAKKADIDGFLVGGASL--DAAKFKTIINSVSE 259 (261)
T ss_dssp HHHHTSTTCCEEEESGGGG--SHHHHHHHHGGGGG
T ss_pred HHHhcCCCCCeeEecHHHh--ChHHHHHHHHHHHh
Confidence 3444567899999999875 67889999886543
No 222
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=22.22 E-value=1.1e+02 Score=26.80 Aligned_cols=61 Identities=11% Similarity=-0.101 Sum_probs=37.2
Q ss_pred HHHHhCCCceEEeC--CCCCCC-CHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEe
Q psy14115 47 HQMVEKDVNGFAVG--GLSGGE-AKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMF 110 (319)
Q Consensus 47 ~~l~~~~~~G~aIg--Gl~~ge-~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~F 110 (319)
+...+.+++.+.+. |+..+. ...--++.+..+.+. +.|...- |+.+|.++..+.++|+|-+
T Consensus 143 ~~a~~~Gad~Ig~~~~g~t~~~~~~~~~~~li~~l~~~---~ipvIA~GGI~t~~d~~~~~~~GadgV 207 (229)
T 3q58_A 143 ISCHQKGIEFIGTTLSGYTGPITPVEPDLAMVTQLSHA---GCRVIAEGRYNTPALAANAIEHGAWAV 207 (229)
T ss_dssp HHHHHTTCSEEECTTTTSSSSCCCSSCCHHHHHHHHTT---TCCEEEESSCCSHHHHHHHHHTTCSEE
T ss_pred HHHHhCCCCEEEecCccCCCCCcCCCCCHHHHHHHHHc---CCCEEEECCCCCHHHHHHHHHcCCCEE
Confidence 33445788877542 332211 000012444554443 6788864 7899999999999999965
No 223
>2bdq_A Copper homeostasis protein CUTC; alpha beta protein, structural genomics, PSI, protein structure initiative; 2.30A {Streptococcus agalactiae}
Probab=22.20 E-value=2.1e+02 Score=25.45 Aligned_cols=67 Identities=19% Similarity=0.215 Sum_probs=45.6
Q ss_pred HHHHHHHHHhCCCceEEeCCCCCCCCHH----HHHHHHHHhhcCCCCCCCeEecCCC-ChHHHHHHH-HcCCcEeecC
Q psy14115 42 RKDCAHQMVEKDVNGFAVGGLSGGEAKE----DFWYSVLVSINCLPKDKPRYVMGIG-FAVDLLICC-ALGADMFDCV 113 (319)
Q Consensus 42 R~~s~~~l~~~~~~G~aIgGl~~ge~~~----e~~~ii~~~~~~LP~dkPr~l~Gvg-~P~~Il~~V-~lGvD~FD~~ 113 (319)
+.++++.|.+.+++-+.=.|-....+.. .+.++++.. .+++..+.|-| ++.++...+ +.|++-|-.+
T Consensus 135 ~~~ale~L~~lGv~rILTSG~~~~~~a~~g~~~L~~Lv~~a-----~~ri~Im~GgGV~~~Ni~~l~~~tGv~e~H~s 207 (224)
T 2bdq_A 135 QKKSIDQLVALGFTRILLHGSSNGEPIIENIKHIKALVEYA-----NNRIEIMVGGGVTAENYQYICQETGVKQAHGT 207 (224)
T ss_dssp HHHHHHHHHHTTCCEEEECSCSSCCCGGGGHHHHHHHHHHH-----TTSSEEEECSSCCTTTHHHHHHHHTCCEEEET
T ss_pred HHHHHHHHHHcCCCEEECCCCCCCCcHHHHHHHHHHHHHhh-----CCCeEEEeCCCCCHHHHHHHHHhhCCCEEccc
Confidence 3567888889999888766644332233 344444432 24677888888 789998888 6899988754
No 224
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=22.02 E-value=64 Score=30.67 Aligned_cols=43 Identities=12% Similarity=0.009 Sum_probs=34.8
Q ss_pred HHHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCC
Q psy14115 70 DFWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVF 114 (319)
Q Consensus 70 e~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~ 114 (319)
--|+.|+.+.+.. +.|..+=|+-++++...+++.|+|.++..-
T Consensus 204 ~~w~~i~~lr~~~--~~PvivK~v~~~e~A~~a~~~GaD~I~vsn 246 (352)
T 3sgz_A 204 FCWNDLSLLQSIT--RLPIILKGILTKEDAELAMKHNVQGIVVSN 246 (352)
T ss_dssp CCHHHHHHHHHHC--CSCEEEEEECSHHHHHHHHHTTCSEEEECC
T ss_pred CCHHHHHHHHHhc--CCCEEEEecCcHHHHHHHHHcCCCEEEEeC
Confidence 3466677777665 488988889999999999999999998653
No 225
>3m9y_A Triosephosphate isomerase; TIM barrel, glycolysis, gluconeogenesis, pentose; HET: CIT; 1.90A {Staphylococcus aureus} SCOP: c.1.1.1 PDB: 3uwv_A* 3uwu_A* 3uww_A* 3uwy_A 3uwz_A*
Probab=21.95 E-value=65 Score=29.26 Aligned_cols=29 Identities=34% Similarity=0.389 Sum_probs=23.0
Q ss_pred HHHHhCCCceEEeCCCCCCCCHHHHHHHHHH
Q psy14115 47 HQMVEKDVNGFAVGGLSGGEAKEDFWYSVLV 77 (319)
Q Consensus 47 ~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~ 77 (319)
+-+.+.++||+.|||.|. ..++|.++++.
T Consensus 224 ~l~~~~diDG~LVGgASL--~~~~F~~Ii~~ 252 (254)
T 3m9y_A 224 EYMAQTDIDGALVGGASL--KVEDFVQLLEG 252 (254)
T ss_dssp HHHTSTTCCEEEESGGGS--SHHHHHHHHHH
T ss_pred HHHcCCCCCeEEeeHHhh--CHHHHHHHHHh
Confidence 333467899999999875 68899999875
No 226
>3s6d_A Putative triosephosphate isomerase; seattle structural genomics center for infectious disease, S pathogenic fungus, eukaryote; 2.20A {Coccidioides immitis RS}
Probab=21.93 E-value=57 Score=30.64 Aligned_cols=29 Identities=24% Similarity=0.275 Sum_probs=24.3
Q ss_pred CCCceEEeCCCCCCCCHHHHHHHHHHhhcCC
Q psy14115 52 KDVNGFAVGGLSGGEAKEDFWYSVLVSINCL 82 (319)
Q Consensus 52 ~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~L 82 (319)
.++||+.|||.+. +.++|.++++.+...|
T Consensus 281 ~dVDG~LVGgASL--~a~~F~~Ii~e~~~~~ 309 (310)
T 3s6d_A 281 KEVDGMFLGRFAH--DIEGVRKVVREVEESL 309 (310)
T ss_dssp GTCSEEEECGGGG--SHHHHHHHHHHHHHHC
T ss_pred CCCCEEEeeheee--cHHHHHHHHHHHHHHh
Confidence 7899999999875 6889999998876543
No 227
>4hb7_A Dihydropteroate synthase; transferase; 1.95A {Staphylococcus aureus} PDB: 1ad1_A 1ad4_A*
Probab=21.88 E-value=2.3e+02 Score=25.89 Aligned_cols=87 Identities=20% Similarity=0.242 Sum_probs=53.4
Q ss_pred Cceeeec--------cCCCCHH--HHHHHHHHHHhCCCceEEeCCCCC--C----CCHHHHHHHHHHhhcCCCCCCCeEe
Q psy14115 27 QNIFPIV--------QGGLDEA--LRKDCAHQMVEKDVNGFAVGGLSG--G----EAKEDFWYSVLVSINCLPKDKPRYV 90 (319)
Q Consensus 27 q~lfgiV--------qGG~~~d--lR~~s~~~l~~~~~~G~aIgGl~~--g----e~~~e~~~ii~~~~~~LP~dkPr~l 90 (319)
+.+.||+ -||.+.+ .=.+.+++|.+.|.+-.=|||-|. | ...+|+.+++..+.. |........
T Consensus 7 ~~iMGIlNvTPDSFsDGG~~~~~~~a~~~a~~m~~~GAdiIDIGgeSTRPga~~vs~eeE~~Rv~pvi~~-l~~~~v~iS 85 (270)
T 4hb7_A 7 TKIMGILNVTPDSFSDGGKFNNVETAINRVKAMIDEGADIIDVGGVSTRPGHEMVTLEEELNRVLPVVEA-IVGFDVKIS 85 (270)
T ss_dssp CEEEEEEECC----------CHHHHHHHHHHHHHHTTCSEEEEESCCCSTTCCCCCHHHHHHHHHHHHHH-HTTSSSEEE
T ss_pred CeEEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCccCCCCCCCCchHHHHHHHHHHHHH-hhcCCCeEE
Confidence 4567776 3565433 345668889999999999999764 2 234566665543332 222122333
Q ss_pred cCCCChHHHHHHHHcCCcEeecCC
Q psy14115 91 MGIGFAVDLLICCALGADMFDCVF 114 (319)
Q Consensus 91 ~Gvg~P~~Il~~V~lGvD~FD~~~ 114 (319)
.-.-.|.-+-.|++.|+|++--+.
T Consensus 86 IDT~~~~Va~~al~aGa~iINDVs 109 (270)
T 4hb7_A 86 VDTFRSEVAEACLKLGVDMINDQW 109 (270)
T ss_dssp EECSCHHHHHHHHHHTCCEEEETT
T ss_pred EECCCHHHHHHHHHhccceecccc
Confidence 345779989999999999986543
No 228
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=21.72 E-value=61 Score=32.21 Aligned_cols=40 Identities=13% Similarity=0.179 Sum_probs=33.9
Q ss_pred HHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecC
Q psy14115 72 WYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 72 ~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
|+.|+.+++.. +.|..+=|++++++...+++.|+|.++..
T Consensus 332 ~~~i~~lr~~~--~~PvivKgv~~~e~A~~a~~aGad~I~vs 371 (511)
T 1kbi_A 332 WKDIEELKKKT--KLPIVIKGVQRTEDVIKAAEIGVSGVVLS 371 (511)
T ss_dssp HHHHHHHHHHC--SSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHHh--CCcEEEEeCCCHHHHHHHHHcCCCEEEEc
Confidence 66777777765 58888889999999999999999999884
No 229
>3iwp_A Copper homeostasis protein CUTC homolog; conserved sequence motif, metal-binding site, polymorphism, metal binding protein; 2.50A {Homo sapiens}
Probab=21.69 E-value=2.8e+02 Score=25.61 Aligned_cols=68 Identities=13% Similarity=0.052 Sum_probs=47.5
Q ss_pred HHHHHHHHHhCCCceEEeCCCC--CCCCHHHHHHHHHHhhcCCCCCCCeEecCCC-ChHHHHHHHH-cCCcEeecCC
Q psy14115 42 RKDCAHQMVEKDVNGFAVGGLS--GGEAKEDFWYSVLVSINCLPKDKPRYVMGIG-FAVDLLICCA-LGADMFDCVF 114 (319)
Q Consensus 42 R~~s~~~l~~~~~~G~aIgGl~--~ge~~~e~~~ii~~~~~~LP~dkPr~l~Gvg-~P~~Il~~V~-lGvD~FD~~~ 114 (319)
..++++.+.+.+++-+.-+|-. .-+..+.+.++++..- .+...+.|-| ++.++...++ .|+|-|-++.
T Consensus 168 ~~~Ale~Li~lGvdrILTSG~~~~a~~Gl~~Lk~Lv~~a~-----~rI~ImaGGGV~~~Ni~~l~~~tG~~~~H~S~ 239 (287)
T 3iwp_A 168 PMAALETLLTLGFERVLTSGCDSSALEGLPLIKRLIEQAK-----GRIVVMPGGGITDRNLQRILEGSGATEFHCSA 239 (287)
T ss_dssp HHHHHHHHHHHTCSEEEECTTSSSTTTTHHHHHHHHHHHT-----TSSEEEECTTCCTTTHHHHHHHHCCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEECCCCCCChHHhHHHHHHHHHHhC-----CCCEEEECCCcCHHHHHHHHHhhCCCEEeECc
Confidence 3467788888899988887752 2233455566666533 2445666776 7999998887 9999998865
No 230
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=21.45 E-value=69 Score=29.97 Aligned_cols=63 Identities=13% Similarity=0.144 Sum_probs=37.3
Q ss_pred HHHHHHhCCCceEEe--CCCCC---CCCHHHHHHHHHHhhcCCCCCCCeEecCC-CChHH-HHHHHHcCCc
Q psy14115 45 CAHQMVEKDVNGFAV--GGLSG---GEAKEDFWYSVLVSINCLPKDKPRYVMGI-GFAVD-LLICCALGAD 108 (319)
Q Consensus 45 s~~~l~~~~~~G~aI--gGl~~---ge~~~e~~~ii~~~~~~LP~dkPr~l~Gv-g~P~~-Il~~V~lGvD 108 (319)
+.+.+ +.+++-+|+ |...+ ..++.--.+.|+.+.+.++++-|.-+.|- |.|.+ |-.+|.+||=
T Consensus 177 a~~Fv-~TgvD~LAvaiGt~HG~Yk~~~p~Ld~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~ai~~GV~ 246 (306)
T 3pm6_A 177 SEEFV-ATGINWLAPAFGNVHGNYGPRGVQLDYERLQRINEAVGERVGLVLHGADPFTKEIFEKCIERGVA 246 (306)
T ss_dssp HHHHH-TTTCSEECCCSSCCSSCCCTTCCCCCHHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHHHHTTEE
T ss_pred HHHHH-HcCCCEEEEEcCccccCcCCCCCccCHHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHHHHcCCe
Confidence 33333 678887774 43221 11122234455555555555678888875 77766 8899999873
No 231
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=21.20 E-value=3.1e+02 Score=22.83 Aligned_cols=78 Identities=6% Similarity=0.084 Sum_probs=50.1
Q ss_pred CCceeeeccCCCCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEe--cCCCChHHHHHHH
Q psy14115 26 TQNIFPIVQGGLDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYV--MGIGFAVDLLICC 103 (319)
Q Consensus 26 ~q~lfgiVqGG~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l--~Gvg~P~~Il~~V 103 (319)
...+.++|.| .+.+--.+.++.+.+.+++.+-+.-.. .+ ..+.+..+++..| .|..+ -++-+|.++-.++
T Consensus 6 ~~~i~~~i~~-~d~~~~~~~~~~~~~~G~~~i~l~~~~----~~-~~~~i~~i~~~~~--~~l~vg~g~~~~~~~i~~a~ 77 (212)
T 2v82_A 6 KLPLIAILRG-ITPDEALAHVGAVIDAGFDAVEIPLNS----PQ-WEQSIPAIVDAYG--DKALIGAGTVLKPEQVDALA 77 (212)
T ss_dssp SSCEEEECTT-CCHHHHHHHHHHHHHHTCCEEEEETTS----TT-HHHHHHHHHHHHT--TTSEEEEECCCSHHHHHHHH
T ss_pred CCCEEEEEeC-CCHHHHHHHHHHHHHCCCCEEEEeCCC----hh-HHHHHHHHHHhCC--CCeEEEeccccCHHHHHHHH
Confidence 3568888876 666656667788888888888775432 11 1233444443333 44554 2334688999999
Q ss_pred HcCCcEee
Q psy14115 104 ALGADMFD 111 (319)
Q Consensus 104 ~lGvD~FD 111 (319)
+.|+|.+-
T Consensus 78 ~~Gad~V~ 85 (212)
T 2v82_A 78 RMGCQLIV 85 (212)
T ss_dssp HTTCCEEE
T ss_pred HcCCCEEE
Confidence 99999884
No 232
>3ceu_A Thiamine phosphate pyrophosphorylase; TIM barrel-like protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacteroides thetaiotaomicron vpi-5482}
Probab=21.11 E-value=1.9e+02 Score=24.42 Aligned_cols=64 Identities=9% Similarity=-0.147 Sum_probs=39.8
Q ss_pred CCCceEEeCCCCCCCCHHH-----HHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecCCc
Q psy14115 52 KDVNGFAVGGLSGGEAKED-----FWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCVFP 115 (319)
Q Consensus 52 ~~~~G~aIgGl~~ge~~~e-----~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~~P 115 (319)
.+.+.+.+|.+-...++.. =++.+..+...++.+.|.+..|==+|.++..+++.|+|.++....
T Consensus 106 ~GaDyv~~g~vf~t~sk~~~~~~~g~~~l~~~~~~~~~~iPviaiGGI~~~nv~~~~~~Ga~gVav~s~ 174 (210)
T 3ceu_A 106 HFYDYVFMSPIYDSISKVNYYSTYTAEELREAQKAKIIDSKVMALGGINEDNLLEIKDFGFGGAVVLGD 174 (210)
T ss_dssp GGSSEEEECCCC---------CCCCHHHHHHHHHTTCSSTTEEEESSCCTTTHHHHHHTTCSEEEESHH
T ss_pred hCCCEEEECCcCCCCCCCCCCCCCCHHHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhCCCEEEEhHH
Confidence 5788888876521111111 134455555544236889988633599999999999999887643
No 233
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=21.05 E-value=1.5e+02 Score=27.89 Aligned_cols=73 Identities=8% Similarity=-0.134 Sum_probs=46.3
Q ss_pred CCCCHHHHHHHHHHHHhCCCceEEeCCCCC-CCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcC-CcEee
Q psy14115 35 GGLDEALRKDCAHQMVEKDVNGFAVGGLSG-GEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALG-ADMFD 111 (319)
Q Consensus 35 GG~~~dlR~~s~~~l~~~~~~G~aIgGl~~-ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lG-vD~FD 111 (319)
+|...+.=.+-++.+.+.+++.+.+.+-.. +... .-++.+..+.+.++ .|.... |+ +|++...+++.| +|++=
T Consensus 245 ~~~~~~~~~~~a~~l~~~G~d~i~v~~~~~~~~~~-~~~~~~~~i~~~~~--iPvi~~Ggi-~~~~a~~~l~~g~aD~V~ 320 (365)
T 2gou_A 245 DADPILTYTAAAALLNKHRIVYLHIAEVDWDDAPD-TPVSFKRALREAYQ--GVLIYAGRY-NAEKAEQAINDGLADMIG 320 (365)
T ss_dssp CSSHHHHHHHHHHHHHHTTCSEEEEECCBTTBCCC-CCHHHHHHHHHHCC--SEEEEESSC-CHHHHHHHHHTTSCSEEE
T ss_pred CCCCHHHHHHHHHHHHHcCCCEEEEeCCCcCCCCC-ccHHHHHHHHHHCC--CcEEEeCCC-CHHHHHHHHHCCCcceeh
Confidence 344445555667888889999999876311 1110 01234444444443 577765 46 899999999998 99873
No 234
>3vk5_A MOEO5; TIM barrel, transferase; HET: FPQ; 1.39A {Streptomyces ghanaensis} PDB: 3vka_A* 3vkb_A* 3vkc_A* 3vkd_A*
Probab=21.05 E-value=98 Score=28.73 Aligned_cols=40 Identities=18% Similarity=0.032 Sum_probs=30.1
Q ss_pred HHHHHhhcCCCCCCCeEe-cCCCChHHHHHHHHcCCcEeec
Q psy14115 73 YSVLVSINCLPKDKPRYV-MGIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 73 ~ii~~~~~~LP~dkPr~l-~Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
++|+.+.+.++.+.|..+ .|+-+|+++-.++..|+|.+-.
T Consensus 215 e~V~~I~~~~~~~iPV~vGGGIrs~Eda~~ll~aGAD~VVV 255 (286)
T 3vk5_A 215 EVVRHFRKGLGPDQVLFVSGNVRSGRQVTEYLDSGADYVGF 255 (286)
T ss_dssp HHHHHHHHHSCTTCEEEEESSCCSHHHHHHHHHTTCSEEEE
T ss_pred HHHHHHHHhcCCCCCEEEEeCCCCHHHHHHHHHcCCCEEEE
Confidence 455555555544677877 5899999999999999998754
No 235
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=21.03 E-value=66 Score=30.45 Aligned_cols=41 Identities=17% Similarity=0.018 Sum_probs=33.8
Q ss_pred HHHHHHHhhcCCCCCCCeEecCCCChHHHHHHHHcCCcEeecC
Q psy14115 71 FWYSVLVSINCLPKDKPRYVMGIGFAVDLLICCALGADMFDCV 113 (319)
Q Consensus 71 ~~~ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~lGvD~FD~~ 113 (319)
.++.|+.+++.. +.|..+=|+-+|++...+++.|+|.++..
T Consensus 217 ~~~~i~~lr~~~--~~PvivK~v~~~e~a~~a~~~Gad~I~vs 257 (368)
T 2nli_A 217 SPRDIEEIAGHS--GLPVFVKGIQHPEDADMAIKRGASGIWVS 257 (368)
T ss_dssp CHHHHHHHHHHS--SSCEEEEEECSHHHHHHHHHTTCSEEEEC
T ss_pred hHHHHHHHHHHc--CCCEEEEcCCCHHHHHHHHHcCCCEEEEc
Confidence 366677777765 47888888899999999999999999874
No 236
>1tre_A Triosephosphate isomerase; intramolecular oxidoreductase; 2.60A {Escherichia coli} SCOP: c.1.1.1 PDB: 1tmh_A
Probab=20.56 E-value=60 Score=29.53 Aligned_cols=42 Identities=29% Similarity=0.451 Sum_probs=28.1
Q ss_pred eccCC-CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHh
Q psy14115 32 IVQGG-LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVS 78 (319)
Q Consensus 32 iVqGG-~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~ 78 (319)
|+-|| ..++ -+.+-+...+++|+.+||.+. ..++|.++++..
T Consensus 207 IlYGGSV~~~---N~~~l~~~~diDG~LVGgAsL--~a~~F~~Ii~~~ 249 (255)
T 1tre_A 207 IQYGGSVNAS---NAAELFAQPDIDGALVGGASL--KADAFAVIVKAA 249 (255)
T ss_dssp EEECSCCCTT---THHHHHTSTTCCEEEESGGGG--CHHHHHHHHHHH
T ss_pred EEEcCCCCHH---HHHHHHcCCCCCeeEecHHHh--ChHHHHHHHHHH
Confidence 44444 4443 233334447999999999875 678899998754
No 237
>3f4w_A Putative hexulose 6 phosphate synthase; humps, malonate, lyase; 1.65A {Salmonella typhimurium} SCOP: c.1.2.0
Probab=20.46 E-value=1.5e+02 Score=24.77 Aligned_cols=60 Identities=12% Similarity=0.106 Sum_probs=39.3
Q ss_pred HHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeE--ecCCCChHH-HHHHHHcCCcEe
Q psy14115 45 CAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRY--VMGIGFAVD-LLICCALGADMF 110 (319)
Q Consensus 45 s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~--l~Gvg~P~~-Il~~V~lGvD~F 110 (319)
.++...+.+++++.+.+... .+.+.++++.+.+. ..+.. +.++.+|.+ +..+...|+|.+
T Consensus 69 ~~~~~~~~Gad~v~v~~~~~---~~~~~~~~~~~~~~---g~~~~v~~~~~~t~~~~~~~~~~~g~d~i 131 (211)
T 3f4w_A 69 ESQLLFDAGADYVTVLGVTD---VLTIQSCIRAAKEA---GKQVVVDMICVDDLPARVRLLEEAGADML 131 (211)
T ss_dssp HHHHHHHTTCSEEEEETTSC---HHHHHHHHHHHHHH---TCEEEEECTTCSSHHHHHHHHHHHTCCEE
T ss_pred HHHHHHhcCCCEEEEeCCCC---hhHHHHHHHHHHHc---CCeEEEEecCCCCHHHHHHHHHHcCCCEE
Confidence 37777889999999988642 23445555554432 22222 356678755 678889999986
No 238
>2v82_A 2-dehydro-3-deoxy-6-phosphogalactonate aldolase; lyase, kdpgal; HET: KDP; 2.1A {Escherichia coli} PDB: 2v81_A*
Probab=20.41 E-value=90 Score=26.31 Aligned_cols=57 Identities=12% Similarity=0.057 Sum_probs=37.1
Q ss_pred HhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCChHHHHHHHHcCCcEeec
Q psy14115 50 VEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFAVDLLICCALGADMFDC 112 (319)
Q Consensus 50 ~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P~~Il~~V~lGvD~FD~ 112 (319)
.+.+++.+.+.. +...-.+.+..+.+.+|.+.|.+.. |+. |.++..+.+.|+|.+-.
T Consensus 118 ~~~G~d~v~v~~-----t~~~g~~~~~~l~~~~~~~ipvia~GGI~-~~~i~~~~~~Ga~gv~v 175 (212)
T 2v82_A 118 LEAGAQALKIFP-----SSAFGPQYIKALKAVLPSDIAVFAVGGVT-PENLAQWIDAGCAGAGL 175 (212)
T ss_dssp HHTTCSEEEETT-----HHHHCHHHHHHHHTTSCTTCEEEEESSCC-TTTHHHHHHHTCSEEEE
T ss_pred HHCCCCEEEEec-----CCCCCHHHHHHHHHhccCCCeEEEeCCCC-HHHHHHHHHcCCCEEEE
Confidence 345677666521 0111135555666666656788876 465 99999999999998764
No 239
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=20.18 E-value=2.6e+02 Score=25.54 Aligned_cols=74 Identities=19% Similarity=0.126 Sum_probs=43.4
Q ss_pred eeccCC----CCHHHHHHHHHHHHhCCCceEEeCCCCCCCCHHHHHHHHHHhhcCCCCCCCeEec-CCCCh---HHHHHH
Q psy14115 31 PIVQGG----LDEALRKDCAHQMVEKDVNGFAVGGLSGGEAKEDFWYSVLVSINCLPKDKPRYVM-GIGFA---VDLLIC 102 (319)
Q Consensus 31 giVqGG----~~~dlR~~s~~~l~~~~~~G~aIgGl~~ge~~~e~~~ii~~~~~~LP~dkPr~l~-Gvg~P---~~Il~~ 102 (319)
+||||+ .++++...+ .+.+.-|+.-.+ ..+++++.+.+..+.+.. ++|.-+- .+..| ..+-.+
T Consensus 28 Pii~apM~gvs~~~la~av----~~aGglG~i~~~---~~~~~~l~~~i~~i~~~~--~~p~gVnl~~~~~~~~~~~~~~ 98 (326)
T 3bo9_A 28 PILMGGMAWAGTPTLAAAV----SEAGGLGIIGSG---AMKPDDLRKAISELRQKT--DKPFGVNIILVSPWADDLVKVC 98 (326)
T ss_dssp SEEECCCTTTSCHHHHHHH----HHTTSBEEEECT---TCCHHHHHHHHHHHHTTC--SSCEEEEEETTSTTHHHHHHHH
T ss_pred CEEECCCCCCCCHHHHHHH----HhCCCcEEeCCC---CCCHHHHHHHHHHHHHhc--CCCEEEEEeccCCCHHHHHHHH
Confidence 455544 455554433 445666665433 246788888888877654 4565331 12233 345567
Q ss_pred HHcCCcEeecC
Q psy14115 103 CALGADMFDCV 113 (319)
Q Consensus 103 V~lGvD~FD~~ 113 (319)
++.|+|.+...
T Consensus 99 ~~~g~d~V~l~ 109 (326)
T 3bo9_A 99 IEEKVPVVTFG 109 (326)
T ss_dssp HHTTCSEEEEE
T ss_pred HHCCCCEEEEC
Confidence 78999998753
No 240
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=20.15 E-value=2.2e+02 Score=26.62 Aligned_cols=76 Identities=13% Similarity=0.040 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhCCCceEEeCCCCC--CCC--------HHHHHH---HHHHhhcCCCCCCCeEecCCCChHHHHHHHH
Q psy14115 38 DEALRKDCAHQMVEKDVNGFAVGGLSG--GEA--------KEDFWY---SVLVSINCLPKDKPRYVMGIGFAVDLLICCA 104 (319)
Q Consensus 38 ~~dlR~~s~~~l~~~~~~G~aIgGl~~--ge~--------~~e~~~---ii~~~~~~LP~dkPr~l~Gvg~P~~Il~~V~ 104 (319)
+.+.=.+-++++.+.|.+-+=|||-|. |.. .+|+.+ +|+.+.+.. +.| ...-.-.|.-+-.|++
T Consensus 47 ~~~~al~~A~~~v~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~--~vp-ISIDT~~~~Va~aAl~ 123 (314)
T 3tr9_A 47 DLNSALRTAEKMVDEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRF--PQL-ISVDTSRPRVMREAVN 123 (314)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHC--CSE-EEEECSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhC--CCe-EEEeCCCHHHHHHHHH
Confidence 344445667888899999999999653 322 355444 444444432 233 3335567999999999
Q ss_pred cCCcEeecCCcc
Q psy14115 105 LGADMFDCVFPT 116 (319)
Q Consensus 105 lGvD~FD~~~Pt 116 (319)
.|+|++-++...
T Consensus 124 aGa~iINDVsg~ 135 (314)
T 3tr9_A 124 TGADMINDQRAL 135 (314)
T ss_dssp HTCCEEEETTTT
T ss_pred cCCCEEEECCCC
Confidence 999999777543
Done!