Query psy14118
Match_columns 766
No_of_seqs 584 out of 3195
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 19:59:34 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14118.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/14118hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0045|consensus 100.0 7.2E-79 1.6E-83 692.1 25.3 522 17-748 10-610 (612)
2 smart00230 CysPc Calpain-like 100.0 4E-61 8.7E-66 517.2 25.6 247 20-273 1-317 (318)
3 cd00044 CysPc Calpains, domain 100.0 3.5E-54 7.6E-59 464.9 23.8 234 22-264 1-315 (315)
4 PF00648 Peptidase_C2: Calpain 100.0 9.9E-55 2.2E-59 466.8 18.1 229 33-266 1-298 (298)
5 cd00214 Calpain_III Calpain, s 100.0 2.3E-33 5E-38 269.7 14.8 149 361-514 2-150 (150)
6 smart00720 calpain_III calpain 100.0 2.4E-31 5.3E-36 254.2 13.9 142 362-511 1-142 (143)
7 PF01067 Calpain_III: Calpain 100.0 7.7E-29 1.7E-33 238.2 12.3 146 361-511 1-146 (147)
8 KOG0037|consensus 99.9 5.7E-25 1.2E-29 213.6 19.1 165 540-766 55-221 (221)
9 COG5126 FRQ1 Ca2+-binding prot 99.8 1.5E-18 3.3E-23 164.5 16.2 134 536-733 14-156 (160)
10 KOG0027|consensus 99.8 1E-17 2.2E-22 161.6 16.3 133 537-732 3-148 (151)
11 KOG0028|consensus 99.7 2.8E-15 6.1E-20 138.7 15.1 135 536-733 27-170 (172)
12 PTZ00184 calmodulin; Provision 99.6 7.7E-15 1.7E-19 140.5 17.0 133 537-732 6-147 (149)
13 PTZ00183 centrin; Provisional 99.6 1.5E-14 3.2E-19 140.2 17.5 135 536-733 11-154 (158)
14 KOG0030|consensus 99.5 1.7E-13 3.8E-18 123.9 13.7 133 537-732 6-150 (152)
15 KOG0031|consensus 99.5 5.1E-13 1.1E-17 122.9 15.9 130 536-732 26-164 (171)
16 KOG0036|consensus 99.4 1.7E-12 3.7E-17 136.9 15.1 136 536-733 8-146 (463)
17 KOG0034|consensus 99.3 1.7E-11 3.7E-16 120.8 14.7 138 536-740 27-182 (187)
18 KOG0044|consensus 99.3 3.1E-11 6.7E-16 119.0 15.6 143 540-744 24-186 (193)
19 KOG0027|consensus 99.3 9.3E-11 2E-15 113.1 14.5 125 638-764 6-148 (151)
20 COG5126 FRQ1 Ca2+-binding prot 99.2 1.5E-10 3.2E-15 110.4 14.9 130 634-766 11-157 (160)
21 PTZ00183 centrin; Provisional 99.2 2.4E-10 5.2E-15 110.6 15.6 123 639-763 16-152 (158)
22 PTZ00184 calmodulin; Provision 99.2 3.5E-10 7.6E-15 108.1 15.4 124 639-764 10-147 (149)
23 KOG0044|consensus 99.1 8.4E-10 1.8E-14 108.9 14.1 128 634-763 20-173 (193)
24 KOG4223|consensus 99.1 7.3E-10 1.6E-14 114.6 11.0 158 538-760 73-264 (325)
25 cd05022 S-100A13 S-100A13: S-1 99.0 1.7E-09 3.6E-14 94.0 8.3 69 667-735 5-77 (89)
26 KOG0028|consensus 99.0 1E-08 2.2E-13 95.6 13.9 123 639-763 32-168 (172)
27 PF13499 EF-hand_7: EF-hand do 98.8 6.4E-09 1.4E-13 85.3 6.6 61 671-731 1-66 (66)
28 cd05027 S-100B S-100B: S-100B 98.8 2.6E-08 5.7E-13 86.6 10.2 70 666-735 4-81 (88)
29 PLN02964 phosphatidylserine de 98.8 7.3E-08 1.6E-12 111.4 13.7 137 500-713 112-272 (644)
30 KOG4223|consensus 98.7 2.4E-08 5.3E-13 103.5 8.2 128 540-729 161-301 (325)
31 KOG0034|consensus 98.7 2.6E-07 5.6E-12 91.3 14.6 125 637-763 27-173 (187)
32 cd05029 S-100A6 S-100A6: S-100 98.7 9.5E-08 2.1E-12 83.1 9.6 69 667-735 7-81 (88)
33 KOG0038|consensus 98.7 8.6E-08 1.9E-12 87.6 9.0 99 643-741 74-185 (189)
34 cd05026 S-100Z S-100Z: S-100Z 98.7 1.5E-07 3.2E-12 82.9 10.3 71 666-736 6-84 (93)
35 cd05031 S-100A10_like S-100A10 98.7 1.7E-07 3.6E-12 82.8 10.2 71 668-738 6-84 (94)
36 KOG0031|consensus 98.6 2.9E-07 6.2E-12 85.4 11.5 86 667-755 29-121 (171)
37 KOG0037|consensus 98.6 1.8E-07 3.9E-12 92.1 10.4 119 638-764 55-187 (221)
38 cd05025 S-100A1 S-100A1: S-100 98.6 3E-07 6.5E-12 80.9 10.3 69 668-736 7-83 (92)
39 KOG2643|consensus 98.6 4.5E-07 9.7E-12 97.1 13.1 115 646-762 292-450 (489)
40 smart00027 EH Eps15 homology d 98.5 4.1E-07 8.9E-12 80.6 9.2 70 668-739 8-78 (96)
41 cd00052 EH Eps15 homology doma 98.5 2.9E-07 6.3E-12 75.4 7.7 61 673-735 2-63 (67)
42 PLN02964 phosphatidylserine de 98.5 4E-07 8.6E-12 105.4 11.3 86 670-761 143-239 (644)
43 cd05023 S-100A11 S-100A11: S-1 98.5 7.3E-07 1.6E-11 77.7 9.9 69 667-735 6-82 (89)
44 KOG0036|consensus 98.5 1.4E-06 3.1E-11 92.8 13.5 118 638-762 12-143 (463)
45 cd00213 S-100 S-100: S-100 dom 98.5 7.1E-07 1.5E-11 77.7 9.0 69 667-735 5-81 (88)
46 PF13833 EF-hand_8: EF-hand do 98.5 4E-07 8.6E-12 71.5 6.3 51 683-733 1-53 (54)
47 cd05022 S-100A13 S-100A13: S-1 98.4 7.4E-07 1.6E-11 77.5 8.1 70 538-669 4-76 (89)
48 PF13499 EF-hand_7: EF-hand do 98.4 8E-07 1.7E-11 72.8 6.7 65 543-666 1-66 (66)
49 cd00051 EFh EF-hand, calcium b 98.3 2.2E-06 4.7E-11 68.0 7.5 60 672-731 2-62 (63)
50 KOG0377|consensus 98.3 6.9E-06 1.5E-10 87.8 12.9 65 670-734 547-616 (631)
51 KOG2643|consensus 98.3 2.4E-06 5.2E-11 91.7 9.0 114 649-764 208-345 (489)
52 cd05027 S-100B S-100B: S-100B 98.3 4.3E-06 9.3E-11 72.7 9.0 74 538-669 4-80 (88)
53 cd05026 S-100Z S-100Z: S-100Z 98.3 4.2E-06 9.1E-11 73.7 9.0 75 537-669 5-82 (93)
54 smart00027 EH Eps15 homology d 98.3 3.9E-06 8.4E-11 74.4 8.4 73 537-674 5-78 (96)
55 cd00252 SPARC_EC SPARC_EC; ext 98.2 3.8E-06 8.3E-11 76.7 6.9 62 669-734 47-109 (116)
56 KOG4251|consensus 98.2 8.7E-06 1.9E-10 80.8 9.8 201 478-759 56-303 (362)
57 cd05029 S-100A6 S-100A6: S-100 98.2 8.3E-06 1.8E-10 70.9 8.7 74 536-669 4-80 (88)
58 KOG0030|consensus 98.2 1.3E-05 2.8E-10 73.4 9.8 126 638-766 9-152 (152)
59 cd05030 calgranulins Calgranul 98.1 9E-06 2E-10 70.8 8.2 68 667-734 5-80 (88)
60 KOG0041|consensus 98.1 8E-06 1.7E-10 79.0 8.3 75 659-733 87-163 (244)
61 KOG0751|consensus 98.1 4.6E-05 1E-09 82.7 14.6 117 635-754 69-198 (694)
62 PF13833 EF-hand_8: EF-hand do 98.1 9.3E-06 2E-10 63.6 6.2 35 634-668 18-53 (54)
63 cd05023 S-100A11 S-100A11: S-1 98.1 2.2E-05 4.8E-10 68.4 8.8 75 537-669 4-81 (89)
64 cd00052 EH Eps15 homology doma 98.0 1.5E-05 3.3E-10 65.1 7.2 60 545-669 2-62 (67)
65 cd05031 S-100A10_like S-100A10 98.0 2.5E-05 5.5E-10 68.9 8.8 74 538-669 4-80 (94)
66 cd05025 S-100A1 S-100A1: S-100 98.0 4.1E-05 8.8E-10 67.3 10.0 75 538-670 5-82 (92)
67 PF14658 EF-hand_9: EF-hand do 98.0 2E-05 4.4E-10 63.5 6.6 60 674-733 2-64 (66)
68 cd05024 S-100A10 S-100A10: A s 97.9 5.5E-05 1.2E-09 65.4 8.7 74 538-669 4-77 (91)
69 cd05030 calgranulins Calgranul 97.9 5.5E-05 1.2E-09 65.9 8.0 74 538-669 4-80 (88)
70 cd00213 S-100 S-100: S-100 dom 97.9 8.4E-05 1.8E-09 64.6 8.9 75 537-669 3-80 (88)
71 KOG2562|consensus 97.8 0.00017 3.7E-09 78.5 11.7 116 641-759 226-375 (493)
72 cd05024 S-100A10 S-100A10: A s 97.8 0.00028 6.1E-09 61.1 10.5 69 667-736 5-79 (91)
73 KOG0041|consensus 97.7 0.00022 4.8E-09 69.2 9.6 96 537-695 94-200 (244)
74 PF00036 EF-hand_1: EF hand; 97.7 4.4E-05 9.4E-10 51.6 3.4 27 672-698 2-28 (29)
75 cd00051 EFh EF-hand, calcium b 97.7 0.00021 4.5E-09 56.3 7.7 60 544-666 2-62 (63)
76 PF00036 EF-hand_1: EF hand; 97.6 7.9E-05 1.7E-09 50.3 3.3 28 641-668 1-28 (29)
77 KOG0751|consensus 97.6 0.00054 1.2E-08 74.7 11.2 162 541-763 107-276 (694)
78 PF13405 EF-hand_6: EF-hand do 97.5 0.00012 2.5E-09 50.4 3.4 30 671-700 1-31 (31)
79 KOG2562|consensus 97.5 0.00046 1E-08 75.2 9.3 93 638-730 309-421 (493)
80 KOG0040|consensus 97.4 0.00091 2E-08 80.9 12.1 132 536-731 2247-2396(2399)
81 cd00252 SPARC_EC SPARC_EC; ext 97.4 0.00037 8.1E-09 63.7 6.6 61 636-696 44-106 (116)
82 KOG4666|consensus 97.3 0.00026 5.7E-09 73.4 5.4 102 640-743 259-369 (412)
83 PF12763 EF-hand_4: Cytoskelet 97.3 0.00082 1.8E-08 60.2 7.8 69 537-670 5-73 (104)
84 KOG4251|consensus 97.3 0.00012 2.6E-09 72.9 2.6 93 638-730 234-342 (362)
85 KOG0040|consensus 97.2 0.0014 2.9E-08 79.5 9.7 88 669-759 2252-2355(2399)
86 KOG1029|consensus 97.2 0.0038 8.3E-08 71.4 12.7 63 671-735 196-259 (1118)
87 PF14658 EF-hand_9: EF-hand do 97.1 0.0017 3.6E-08 52.6 6.5 60 547-668 3-64 (66)
88 PRK12309 transaldolase/EF-hand 97.1 0.0015 3.3E-08 72.2 8.3 58 634-698 328-385 (391)
89 PF12763 EF-hand_4: Cytoskelet 97.0 0.0036 7.9E-08 56.1 8.2 64 670-736 10-74 (104)
90 PF14788 EF-hand_10: EF hand; 96.9 0.0031 6.6E-08 48.2 5.7 49 686-734 1-50 (51)
91 smart00230 CysPc Calpain-like 96.9 0.00085 1.8E-08 72.9 4.0 54 295-348 260-313 (318)
92 KOG0377|consensus 96.8 0.0077 1.7E-07 65.1 10.8 124 639-764 463-614 (631)
93 PF13202 EF-hand_5: EF hand; P 96.8 0.0011 2.4E-08 43.1 2.8 23 673-695 2-24 (25)
94 KOG0038|consensus 96.7 0.007 1.5E-07 56.0 7.6 90 673-764 74-176 (189)
95 KOG0045|consensus 96.6 0.001 2.3E-08 77.5 2.9 62 282-348 273-334 (612)
96 PRK12309 transaldolase/EF-hand 96.6 0.0047 1E-07 68.4 7.1 50 670-732 334-384 (391)
97 PF13202 EF-hand_5: EF hand; P 96.4 0.0041 8.9E-08 40.4 3.1 25 642-666 1-25 (25)
98 PF00648 Peptidase_C2: Calpain 96.3 0.0029 6.3E-08 68.2 3.3 50 295-344 248-297 (298)
99 KOG0046|consensus 96.1 0.013 2.9E-07 64.8 7.5 66 669-735 18-87 (627)
100 KOG0169|consensus 96.1 0.061 1.3E-06 62.7 12.9 132 537-732 131-273 (746)
101 PF14788 EF-hand_10: EF hand; 95.8 0.027 5.8E-07 43.1 5.6 34 635-668 16-49 (51)
102 PF10591 SPARC_Ca_bdg: Secrete 95.7 0.0033 7.2E-08 57.3 0.7 59 670-730 54-113 (113)
103 PF13405 EF-hand_6: EF-hand do 95.5 0.016 3.5E-07 39.6 3.3 27 641-667 1-27 (31)
104 KOG0046|consensus 95.5 0.04 8.7E-07 61.2 7.7 74 536-669 13-86 (627)
105 KOG4065|consensus 95.3 0.042 9.2E-07 48.9 5.9 57 674-730 71-142 (144)
106 KOG4666|consensus 95.1 0.1 2.2E-06 54.8 9.0 92 670-763 259-357 (412)
107 smart00054 EFh EF-hand, calciu 93.8 0.062 1.3E-06 34.6 2.8 26 672-697 2-27 (29)
108 PF09279 EF-hand_like: Phospho 93.4 0.17 3.7E-06 43.2 5.5 61 671-732 1-68 (83)
109 smart00054 EFh EF-hand, calciu 92.8 0.099 2.1E-06 33.6 2.5 27 642-668 2-28 (29)
110 cd00044 CysPc Calpains, domain 92.7 0.088 1.9E-06 57.2 3.4 47 296-343 269-315 (315)
111 PF09279 EF-hand_like: Phospho 92.6 0.27 5.7E-06 42.0 5.5 64 543-667 1-68 (83)
112 PF10591 SPARC_Ca_bdg: Secrete 92.6 0.048 1E-06 49.7 0.9 58 637-694 51-112 (113)
113 KOG0169|consensus 91.9 1.5 3.2E-05 51.7 11.9 122 637-763 133-272 (746)
114 KOG4065|consensus 91.7 0.53 1.1E-05 42.1 6.3 25 546-570 71-96 (144)
115 KOG1707|consensus 90.3 1.8 3.9E-05 49.6 10.4 58 670-732 315-376 (625)
116 PF05042 Caleosin: Caleosin re 88.5 2.7 5.9E-05 40.9 8.8 61 670-730 96-163 (174)
117 PF05042 Caleosin: Caleosin re 87.1 7.5 0.00016 37.9 10.9 61 635-696 91-164 (174)
118 PLN02952 phosphoinositide phos 86.9 2.6 5.7E-05 49.3 9.1 79 653-732 13-109 (599)
119 KOG1955|consensus 85.5 1.5 3.2E-05 48.7 5.8 68 536-668 225-293 (737)
120 KOG3555|consensus 84.2 1.7 3.7E-05 46.3 5.3 66 635-700 245-312 (434)
121 cd02619 Peptidase_C1 C1 Peptid 83.9 3 6.4E-05 42.2 7.1 52 172-257 167-218 (223)
122 KOG2243|consensus 83.7 2.3 5E-05 52.1 6.6 58 673-731 4060-4118(5019)
123 KOG0042|consensus 83.1 2.2 4.7E-05 48.6 5.9 66 670-735 593-659 (680)
124 PF05517 p25-alpha: p25-alpha 79.6 7.2 0.00016 37.6 7.6 62 673-734 2-70 (154)
125 PF05517 p25-alpha: p25-alpha 79.1 7.2 0.00016 37.6 7.4 35 635-669 36-70 (154)
126 KOG0035|consensus 78.8 13 0.00028 45.1 10.7 99 537-694 742-848 (890)
127 PF08726 EFhand_Ca_insen: Ca2+ 78.8 1 2.3E-05 37.0 1.2 53 670-730 6-66 (69)
128 KOG3555|consensus 77.2 2.9 6.2E-05 44.6 4.2 60 670-733 250-310 (434)
129 KOG0998|consensus 76.4 2.7 5.8E-05 51.7 4.3 60 671-732 284-344 (847)
130 KOG4578|consensus 74.9 2.2 4.9E-05 45.1 2.7 58 641-698 334-398 (421)
131 KOG3866|consensus 74.1 9 0.0002 40.3 6.7 58 673-730 247-321 (442)
132 PF09069 EF-hand_3: EF-hand; 73.5 12 0.00027 32.5 6.5 32 541-572 2-33 (90)
133 KOG1707|consensus 73.3 16 0.00035 42.2 9.1 90 670-761 195-339 (625)
134 KOG1029|consensus 72.8 5.3 0.00011 46.9 5.2 66 539-669 192-258 (1118)
135 KOG4578|consensus 71.3 3.1 6.8E-05 44.0 2.7 60 672-733 335-398 (421)
136 KOG0035|consensus 66.7 16 0.00035 44.3 7.7 65 669-733 746-816 (890)
137 KOG1955|consensus 66.3 11 0.00024 42.1 5.7 60 671-732 232-292 (737)
138 KOG4347|consensus 65.7 7.3 0.00016 45.2 4.4 53 639-692 554-612 (671)
139 KOG4347|consensus 64.3 8.3 0.00018 44.8 4.5 70 657-727 535-612 (671)
140 cd02248 Peptidase_C1A Peptidas 61.0 33 0.00071 34.4 7.9 44 173-252 155-198 (210)
141 KOG1265|consensus 58.6 57 0.0012 39.5 9.9 77 657-733 205-299 (1189)
142 PF09069 EF-hand_3: EF-hand; 52.9 80 0.0017 27.6 7.6 62 670-733 3-75 (90)
143 PF07910 Peptidase_C78: Peptid 51.7 40 0.00087 34.5 6.6 99 94-209 60-181 (218)
144 KOG0042|consensus 51.1 29 0.00063 39.9 5.9 71 536-669 587-658 (680)
145 COG4870 Cysteine protease [Pos 48.1 20 0.00043 39.1 3.9 57 172-256 260-318 (372)
146 PF00112 Peptidase_C1: Papain 47.5 25 0.00053 35.3 4.4 43 174-252 163-205 (219)
147 KOG3866|consensus 47.2 30 0.00066 36.6 4.9 56 643-698 247-324 (442)
148 PF01023 S_100: S-100/ICaBP ty 45.9 35 0.00076 25.4 3.8 33 539-571 3-38 (44)
149 PLN02222 phosphoinositide phos 43.5 58 0.0013 38.3 7.0 28 639-668 24-51 (581)
150 PLN02952 phosphoinositide phos 41.7 1.1E+02 0.0025 36.1 9.1 82 683-764 13-109 (599)
151 PF14513 DAG_kinase_N: Diacylg 41.0 96 0.0021 29.3 6.8 62 655-716 6-79 (138)
152 PF08726 EFhand_Ca_insen: Ca2+ 36.1 33 0.00071 28.4 2.5 28 541-568 5-32 (69)
153 KOG0998|consensus 32.3 64 0.0014 40.0 5.4 62 671-735 130-192 (847)
154 KOG4403|consensus 31.3 1E+02 0.0022 34.3 6.0 31 635-665 63-93 (575)
155 PF05543 Peptidase_C47: Stapho 30.7 1.5E+02 0.0031 29.2 6.4 55 142-209 91-145 (175)
156 KOG2871|consensus 29.9 59 0.0013 35.5 3.9 59 670-728 309-369 (449)
157 PF11116 DUF2624: Protein of u 29.2 2.4E+02 0.0052 24.3 6.7 50 685-734 13-63 (85)
158 KOG1785|consensus 29.0 8.4E+02 0.018 27.1 12.3 78 683-760 187-269 (563)
159 PLN02228 Phosphoinositide phos 28.1 1.6E+02 0.0035 34.6 7.4 31 637-669 21-51 (567)
160 PLN02222 phosphoinositide phos 27.5 1.7E+02 0.0037 34.5 7.4 65 542-668 25-90 (581)
161 KOG2243|consensus 26.8 86 0.0019 39.6 4.8 31 636-666 4088-4118(5019)
162 KOG3449|consensus 26.6 1.7E+02 0.0036 26.4 5.4 53 673-729 4-56 (112)
163 PLN02230 phosphoinositide phos 26.2 2.1E+02 0.0046 33.9 7.9 30 541-570 28-57 (598)
164 PLN02228 Phosphoinositide phos 25.7 2.1E+02 0.0046 33.6 7.8 30 540-570 22-51 (567)
165 PF08976 DUF1880: Domain of un 25.3 52 0.0011 30.0 2.1 33 637-669 4-36 (118)
166 PLN02230 phosphoinositide phos 24.5 1.8E+02 0.0038 34.5 6.9 62 671-733 30-102 (598)
167 PF07308 DUF1456: Protein of u 24.0 2.7E+02 0.0058 22.9 5.9 45 687-731 14-59 (68)
168 PF08414 NADPH_Ox: Respiratory 23.6 2.1E+02 0.0045 25.5 5.4 59 671-734 31-93 (100)
169 cd02620 Peptidase_C1A_Cathepsi 23.1 1.4E+02 0.003 30.8 5.2 26 176-209 184-209 (236)
170 PF12631 GTPase_Cys_C: Catalyt 22.8 2.8E+02 0.006 22.9 6.0 56 660-715 13-72 (73)
171 cd07313 terB_like_2 tellurium 21.9 3.6E+02 0.0077 23.5 7.0 80 555-697 13-99 (104)
172 PTZ00373 60S Acidic ribosomal 21.6 2.3E+02 0.0049 25.8 5.5 52 674-729 7-58 (112)
173 PF12486 DUF3702: ImpA domain 21.3 3.9E+02 0.0085 25.6 7.4 51 649-699 48-98 (148)
No 1
>KOG0045|consensus
Probab=100.00 E-value=7.2e-79 Score=692.05 Aligned_cols=522 Identities=45% Similarity=0.750 Sum_probs=436.0
Q ss_pred CCCHHHHHHHHHHcCCceeCCCCCCCCCCcccCCC-CC---CceEeeCCC------------------------------
Q psy14118 17 VQDFAAIRDRCLSQGTLFEDPDFPCDDSSIFYSKM-PP---KSFEWMRPM------------------------------ 62 (766)
Q Consensus 17 ~~~~~~i~~~c~~~~~~f~D~~Fp~~~~sl~~~~~-~~---~~~~w~Rp~------------------------------ 62 (766)
.++|+++++.|++++.+|+|+.|||..+||++... +. ..++|+||.
T Consensus 10 ~~~~~~~~~~cl~~~~~F~D~~FP~~~~Sl~~~~~~p~~~~~~i~W~RP~ei~~~p~~i~~~~~~~di~Qg~lgdCw~la 89 (612)
T KOG0045|consen 10 MKDFERLRRDCLPAKSLFVDALFPAADSSLFYKLSTPLAQFSDIVWKRPQEICANPRLIVDGPSRFDVKQGLLGDCWFLA 89 (612)
T ss_pred hhhHHHHHHHHhhcCCcccccCCCCCCccccccccCCCcccccceecCcccccCCCCeecCCCCcceeEEeeecchHHHH
Confidence 45899999999999999999999999999998654 44 589999999
Q ss_pred ------------------------------------CCeEEEEEeceeeeccCCcEEEEecCCCCchhHHHHHHHhhhhc
Q psy14118 63 ------------------------------------YGRWVDVVIDDRLPTYYGKLVFLHSSTDNEFWSALLEKAYAKLH 106 (766)
Q Consensus 63 ------------------------------------~G~W~~V~VDD~lP~~~g~~~~~~s~~~~e~W~~LlEKAyAKl~ 106 (766)
+|+|+.|+|||+|||.+|.++|+++..++|||+|||||||||++
T Consensus 90 A~a~la~~~~ll~~vip~~~~~~~~yaGif~f~~w~~G~W~~VvIDD~LP~~~~~~~~~~s~~~~efW~aLlEKAyaKl~ 169 (612)
T KOG0045|consen 90 ACAALALRPELLDKVIPQDQSFQENYAGIFHFRFWQNGEWVEVVIDDRLPTSNGGLLFSHSSGKNEFWAALLEKAYAKLL 169 (612)
T ss_pred HHHHhhcCHHHHHhccCCCcccccccceEEEEEEEeCCeEEEEEeeeecceEcCCEEEEeecCCceeHHHHHHHHHHHHh
Confidence 99999999999999999999999999889999999999999999
Q ss_pred CCcccccCCChhhhhhhccCCeeEEEEcCCCch----HHHHHHHHHhhcCCceeeecCC-CCccc--ccccCCCCCCCce
Q psy14118 107 GSYEALKGGSTCEAMEDFTGGVSEMYELNEAPS----NLWQILLKAHERSSLMGCSIEP-DPSVL--EMQTPQGLVKGHA 179 (766)
Q Consensus 107 GsY~~l~gg~~~~al~dlTG~~~~~~~l~~~~~----~lw~~l~~~~~~g~l~~~~~~~-~~~~~--~~~~~~GL~~~ha 179 (766)
|||++|.||.+.+||++|||++++.+.+.+.+. +++..+....++|.+++|++.. +.... +....+||+++||
T Consensus 170 GsY~~l~gg~~~~a~~~lTG~~~e~~~l~~~~~~~~~~l~~~~~~~~~~~~~l~c~~~~~~~~~~~~~~~~~~gL~~~Ha 249 (612)
T KOG0045|consen 170 GSYEALHGGSTIDALVDLTGGVTEPFDLNKTPKSFKNNLVWALLKSAHRGSLLLCSIESKDPTEEEEEAKLRNGLVKGHA 249 (612)
T ss_pred CcccCCCCCchhhHHHhccCCccceeEcccCcchhHHHHHHHHHHhhhccCceeeeccccccchhHHHHHhhcCcccccc
Confidence 999999999999999999999999999988554 7788888899999999998865 33333 5678899999999
Q ss_pred eEEeeEEEecccCCCCCCceeEEEEeCCCCCCCcccccCCCCCccCCCCCHHHHHHhCCccCCCCeEEEeHhHHHhhcCe
Q psy14118 180 YSITRIKYVDISTPNTSGKIPLIRMRNPWGNEAEWNGAWSDKSQEWRFIPDHEKRELGLTFDDDGEFWMSYKDFLKYFSR 259 (766)
Q Consensus 180 Ysv~~v~~~~~~~~~~~~~~~ll~lrNPWg~~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~Fwm~~~df~~~F~~ 259 (766)
|+|++++++ +..++.++||||||||| ..+|+|.|||.+++|..+....++.++....+||+|||+++||+++|+.
T Consensus 250 Ysit~~~~~----~~~~~~~~lirlrNPwg-~~~W~G~wsd~~~~W~~v~~~~~~~~~~~~~~dGeFWms~~dF~~~F~~ 324 (612)
T KOG0045|consen 250 YAITDVREV----QGRGGKHRLIRLRNPWG-ESEWNGPWSDGSEEWHLVDKSKLSELGRQPLDDGEFWMSFDDFLREFDS 324 (612)
T ss_pred EEEEEEEEe----ecccccceeEEecCCcC-CceeccccccCCcchhhhCHHHHhhcccccccCCCeeeeHHHHHhhCCe
Confidence 999999997 34556799999999999 9999999999999999998888888888878999999999999999999
Q ss_pred EEEEecCCCcccccccccccCccccceeccccccccccCCCCCcccccCchhhhhcCccccCCCceeeecccccccccce
Q psy14118 260 LEICNLSPDSLIEDAMSRDRGKKWEMSVYEGEWVRGVTAGGSQEWRFIPDHEKRELGLTFDDDGEFWMSYKDFLKYFSRL 339 (766)
Q Consensus 260 ~~vc~~~p~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~W~ll~rh~~~~lg~~~~~~g~~~~~~~d~~~~~~~i 339 (766)
++||++.+++...+.
T Consensus 325 ~~vC~~~~~~~~~~~----------------------------------------------------------------- 339 (612)
T KOG0045|consen 325 LTVCRLRPDWLESRN----------------------------------------------------------------- 339 (612)
T ss_pred EeecCCCcchhhhhh-----------------------------------------------------------------
Confidence 999999999765432
Q ss_pred EEeecCCCchhhhhccccCCCceeEEEEeeee--eeCCcCCCCccCccccccCCeEEEEEecccCCCCCCceEEEEEEEe
Q psy14118 340 EICNLSPDSLIEDAMSRDRGKKWEMSVYEGEW--VRGVTAGGCRNYLETFWCNPQFKITLTEVDENDEDGKCTVIIGLMQ 417 (766)
Q Consensus 340 ~~~~l~~~~~~~~~~~~~~~~~w~~~~~~G~W--~~g~tAGG~~~~~~tf~~NPQy~l~v~~~~~~~~~~~~~v~i~L~Q 417 (766)
...|....++|+| ..+.+||||.++.+||++||||.|.+..+++ +.|.+++.|+|
T Consensus 340 -------------------~~~~~~~~~~~~w~~~~~~t~ggc~~~~~tF~~npq~~~~~~~~~~----~~~~~v~~~~q 396 (612)
T KOG0045|consen 340 -------------------QLQWVKLSLDGEWELARGVTAGGCRNSVDTFDRNPQYILAVRKPTK----SLCAVVLALFQ 396 (612)
T ss_pred -------------------eeeeeeeecCCccceeecccCCCCccCcccccCCceEEEEecCCCc----cceEEEEEeec
Confidence 1357788899999 8889999999999999999999999988652 46999999999
Q ss_pred ccchhhhccCCceeeeeEEEEEecCCCCCCCCCCcccccccCCCcCCccccccceeeeeeeecCCceEEEcCCCCCCCcc
Q psy14118 418 KNRRAQKKTGAECLTIGFAVYQIEDPDNVPTPLDLNFFKYNASCARAPSFINLREVSCRFKLPPGVYCIVPSTFEPNEEG 497 (766)
Q Consensus 418 ~~~r~~~~~~~~~~~Igf~v~~v~~~~~~~~~l~~~~~~~~~~~~~s~~y~~~rev~~~~~L~pG~Y~IVPsT~~p~~~g 497 (766)
++++..++.+.+...|||+||+++.+ ...++..+.+++.+..|++.|+|+.++.+|||.|++|||||+|++++
T Consensus 397 ~~~~~~~~~~~~~~~ig~~i~~v~~~-------~~~~~~~~~~~~~~~~~i~~r~v~~~~~~P~~~y~~~pst~~~~~~~ 469 (612)
T KOG0045|consen 397 KTRRGERSFGANILDIGFHIYEVPLE-------GKYFVLDNAPIASSSSFINNREVSVRFRLPPGTYVIVPSTFEPGEEG 469 (612)
T ss_pred ccccccccccceeeecceEEEEecCC-------CCceEecccchhcccccccceeEEEEecCCCcceeecccCCCCCCCc
Confidence 99999888888899999999999853 24556667789999999999999999999999999999999999999
Q ss_pred CceeEEeecCCCCcccCccccccCcccCccCCCCCCCCcchhhHHHHHHHHHHHcCCCcccCHHHHHHHHHHHhhccccc
Q psy14118 498 EFILRVFSEHKNNMEENDEEVGMGEIDNRIQIPDEPQPEKEKKTEAIRQFFQKLAGDDMEVDWMELKDILDYAMRNETKT 577 (766)
Q Consensus 498 ~F~LrV~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~F~~~d~~~g~i~~~el~~~l~~~~~~~~~~ 577 (766)
+|+|||||...+..++ +..+ ...+++...+..
T Consensus 470 ~f~lrvfs~~~~~~~~-~~~i----------------------------------------~~~~~~~~~~~~------- 501 (612)
T KOG0045|consen 470 EFLLRVFSNVKVKSEE-DMEI----------------------------------------SLDETKRSTNII------- 501 (612)
T ss_pred cEEEEEeecccccCcc-ceEE----------------------------------------eecccccceeee-------
Confidence 9999999999887664 1111 100000000000
Q ss_pred cccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccc
Q psy14118 578 TTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKL 657 (766)
Q Consensus 578 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I 657 (766)
...+++...+..+...++.+.++++
T Consensus 502 -------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~k~ 526 (612)
T KOG0045|consen 502 -------------------------------------------------------VMKGFSLGECGDKWKLSSTLVNTKV 526 (612)
T ss_pred -------------------------------------------------------eecceehhhhchhhhcccccccccc
Confidence 0124556677788888999999999
Q ss_pred cHHHHHHHHHHHHHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCCcccHHHHHHHHHHHHHH
Q psy14118 658 GFEEFQQLWKDIRNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYSGRDARISFDDFMMCAVRLKTM 737 (766)
Q Consensus 658 ~~~EF~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~dd~dG~Is~~EF~~~l~~l~~~ 737 (766)
+..+|..++..+... + |.++.+.+.. |+..++...+.......+..+...+.+.+..+++.-+..+......+
T Consensus 527 s~~~~~~~~~~~~~~---~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 599 (612)
T KOG0045|consen 527 SRSSEFILTVEVVSP---L---DIEGESTLVV-DIPIAIESKGSGDVAPLLNVIRLRIADPEIAYSFDSTSCCATEGPLV 599 (612)
T ss_pred chhhceeeeeccccc---E---EEeccccccc-cccceeeccCCcccccceeeeeeeccChhheeeccccccccccCcch
Confidence 999999888877555 2 8889999998 98888777665555444444444444555667777777777777777
Q ss_pred HHHHhccCCCC
Q psy14118 738 IDLFKARDPSS 748 (766)
Q Consensus 738 ~~~F~~~D~d~ 748 (766)
..+|..++.+.
T Consensus 600 ~~~~~~~~~~~ 610 (612)
T KOG0045|consen 600 LDELFDLSSKK 610 (612)
T ss_pred hhhhhcCCCCC
Confidence 77776665543
No 2
>smart00230 CysPc Calpain-like thiol protease family. Calpain-like thiol protease family (peptidase family C2). Calcium activated neutral protease (large subunit).
Probab=100.00 E-value=4e-61 Score=517.21 Aligned_cols=247 Identities=62% Similarity=1.105 Sum_probs=226.9
Q ss_pred HHHHHHHHHHcCCceeCCCCCCCCCCcccCCCCCCceEeeCCC-------------------------------------
Q psy14118 20 FAAIRDRCLSQGTLFEDPDFPCDDSSIFYSKMPPKSFEWMRPM------------------------------------- 62 (766)
Q Consensus 20 ~~~i~~~c~~~~~~f~D~~Fp~~~~sl~~~~~~~~~~~w~Rp~------------------------------------- 62 (766)
|++|++.|++++.+|+|++|||+..||+.+......++|+||+
T Consensus 1 y~~i~~~c~~~~~~f~D~~Fpp~~~sl~~~~~~~~~~~W~Rp~e~~~~~~~~~~~i~~~di~QG~lgDC~~lsal~~la~ 80 (318)
T smart00230 1 YEALRQYCKESGTLFEDPLFPANNGSLFFSQRQRKFVVWKRPHEIFENPPFIVGGASRTDICQGVLGDCWLLAALASLTL 80 (318)
T ss_pred ChHHHHHHHHcCCCccCCCCCCCcCccccCCCCCCCcEEECcHHHcCCCEEEeCCCChhhccCcccccHHHHHHHHHHHh
Confidence 7899999999999999999999999999876666789999988
Q ss_pred -----------------------------CCeEEEEEeceeeeccCCcEEEEecCCCCchhHHHHHHHhhhhcCCccccc
Q psy14118 63 -----------------------------YGRWVDVVIDDRLPTYYGKLVFLHSSTDNEFWSALLEKAYAKLHGSYEALK 113 (766)
Q Consensus 63 -----------------------------~G~W~~V~VDD~lP~~~g~~~~~~s~~~~e~W~~LlEKAyAKl~GsY~~l~ 113 (766)
+|+|+.|+|||+|||.+|.++|+++++++|+||+||||||||+||||++|.
T Consensus 81 ~~~~i~~if~~~~~~~~~~~G~y~vrl~~~G~w~~V~VDd~lP~~~~~~~~~~~~~~~e~W~~LLEKAyAK~~GsY~~i~ 160 (318)
T smart00230 81 REKLLDRVIPHDQEFSENYAGIFHFRFWRFGKWVDVVIDDRLPTYNGELVFMHSNSRNEFWSALLEKAYAKLNGCYEALK 160 (318)
T ss_pred CHHHHhheEeCCcccccccCCEEEEEEEECCEEEEEEecCCCeeeCCceEEEEeCCCCcchhHHHHHHHHHHcCCCcccC
Confidence 899999999999999988899999999999999999999999999999999
Q ss_pred CCChhhhhhhccCCeeEEEEcCCC---chHHHHHHHHHhhcCCceeeecCCCC-cccccccCCCCCCCceeEEeeEEEec
Q psy14118 114 GGSTCEAMEDFTGGVSEMYELNEA---PSNLWQILLKAHERSSLMGCSIEPDP-SVLEMQTPQGLVKGHAYSITRIKYVD 189 (766)
Q Consensus 114 gg~~~~al~dlTG~~~~~~~l~~~---~~~lw~~l~~~~~~g~l~~~~~~~~~-~~~~~~~~~GL~~~haYsv~~v~~~~ 189 (766)
||.+.+||++|||+|++.++++.. ++++|+.|.+++++|++|+|++.... ...+.....||+++|||+|++|.++.
T Consensus 161 gg~~~~al~~LTG~~~~~i~l~~~~~~~~~~w~~l~~~~~~g~lv~~~t~~~~~~~~~~~~~~GLv~~HaYsVl~v~~~~ 240 (318)
T smart00230 161 GGSTTEALEDLTGGVAESIDLKEASKDPDNLFEDLFKAFERGSLMGCSIGAGTAVEEEEQKDCGLVKGHAYSVTDVREVQ 240 (318)
T ss_pred CCCHHHHHHHhcCCCeEEEEcccccCCHHHHHHHHHHHHhCCCeEEEEcCCCCcchhhhhhhcCcccCccEEEEEEEEEe
Confidence 999999999999999999999763 68899999999999999999986443 22344567999999999999999971
Q ss_pred ccCCCCCCceeEEEEeCCCCCCCcccccCCCCCccCCCCCHHHHHHhCCccCCCCeEEEeHhHHHhhcCeEEEEecCCCc
Q psy14118 190 ISTPNTSGKIPLIRMRNPWGNEAEWNGAWSDKSQEWRFIPDHEKRELGLTFDDDGEFWMSYKDFLKYFSRLEICNLSPDS 269 (766)
Q Consensus 190 ~~~~~~~~~~~ll~lrNPWg~~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~Fwm~~~df~~~F~~~~vc~~~p~~ 269 (766)
+.+++||+|||||| ..||+|+|||+|++|+++++++++++++...+||+|||+|+||+++|++|+||+++|++
T Consensus 241 ------~~~~~Ll~lrNPWg-~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~FWM~~~df~~~F~~~~vc~~~~~~ 313 (318)
T smart00230 241 ------GRRQELLRLRNPWG-QVEWNGPWSDDSPEWRSVSASEKKNLGLTFDDDGEFWMSFEDFLRHFDKVEICNLNPDS 313 (318)
T ss_pred ------cCCeEEEEEECCCC-CCCcCCCCCCCCccccccCHHHHHHhCCCCCCCCEEEEEhHHHHhhCCeEEEeccCCcc
Confidence 23466999999999 99999999999999999998999999998899999999999999999999999999998
Q ss_pred cccc
Q psy14118 270 LIED 273 (766)
Q Consensus 270 ~~~~ 273 (766)
+.++
T Consensus 314 ~~~r 317 (318)
T smart00230 314 LEER 317 (318)
T ss_pred cccc
Confidence 7654
No 3
>cd00044 CysPc Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Probab=100.00 E-value=3.5e-54 Score=464.94 Aligned_cols=234 Identities=54% Similarity=0.977 Sum_probs=209.8
Q ss_pred HHHHHHHHcCCceeCCCCCCCCCCcccC-----CCCCCceEeeCCC----------------------------------
Q psy14118 22 AIRDRCLSQGTLFEDPDFPCDDSSIFYS-----KMPPKSFEWMRPM---------------------------------- 62 (766)
Q Consensus 22 ~i~~~c~~~~~~f~D~~Fp~~~~sl~~~-----~~~~~~~~w~Rp~---------------------------------- 62 (766)
.|++.|++++++|+|++|||+..||+.. ......++|+||.
T Consensus 1 ~~~~~c~~~~~~f~D~~Fpp~~~s~~~~~~~~~~~~~~~~~W~Rp~~~~~~~~~~~~~~~~~~~~~~dI~QG~lgDC~~l 80 (315)
T cd00044 1 TLLQICLLSGVLFEDPDFPPNDSSLGFDDSLSNGQPKKVIEWKRPSEIFADDGNSNPRLFVNGASPSDVCQGILGDCWFL 80 (315)
T ss_pred CHHHHHHHcCCCccCCCCCCCccccccccccccccCcCcceEECcHHHhCcccCCCCEEEeCCCChhhcccCcccchHHH
Confidence 3789999999999999999999999873 3345679999988
Q ss_pred -------------------------------------CCeEEEEEeceeeeccCCcEEEEecCCCCchhHHHHHHHhhhh
Q psy14118 63 -------------------------------------YGRWVDVVIDDRLPTYYGKLVFLHSSTDNEFWSALLEKAYAKL 105 (766)
Q Consensus 63 -------------------------------------~G~W~~V~VDD~lP~~~g~~~~~~s~~~~e~W~~LlEKAyAKl 105 (766)
+|+|+.|+|||+|||.++.|+|+++.+.+|+||+||||||||+
T Consensus 81 saL~~la~~~~~i~~lf~~~~~~~~~~~G~y~v~l~~~G~w~~V~VDD~lP~~~~~~~~~~s~~~~e~W~~LlEKAyAK~ 160 (315)
T cd00044 81 AALAALAERPELLKRVIPPDQSFEENYAGIYHFRFWKNGEWVEVVIDDRLPTSNGGLLFMHSRDRNELWVALLEKAYAKL 160 (315)
T ss_pred HHHHHHHcCHHHHhheEcCCcccccCcCcEEEEEEEECCEEEEEEecCCCeecCCceEEEEECCCCeEcHHHHHHHHHhh
Confidence 9999999999999999888999999988999999999999999
Q ss_pred cCCcccccCCChhhhhhhccCCeeEEEEcCCC-----chHHHHHHHHHhhcCCceeeecCCCCcccccccCCCCCCCcee
Q psy14118 106 HGSYEALKGGSTCEAMEDFTGGVSEMYELNEA-----PSNLWQILLKAHERSSLMGCSIEPDPSVLEMQTPQGLVKGHAY 180 (766)
Q Consensus 106 ~GsY~~l~gg~~~~al~dlTG~~~~~~~l~~~-----~~~lw~~l~~~~~~g~l~~~~~~~~~~~~~~~~~~GL~~~haY 180 (766)
||||++|.||++.+||++|||+|++.++++.. .+.+|+.|.++.+++++|+|++...... +.....||+.+|||
T Consensus 161 ~GsY~~i~gg~~~~al~~LTG~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~lv~~~t~~~~~~-~~~~~~Gl~~~HaY 239 (315)
T cd00044 161 HGSYEALVGGNTAEALEDLTGGPTERIDLKSADASSGDNDLFALLLSFLQGGSLIGCSTGSRSEE-EARTANGLVKGHAY 239 (315)
T ss_pred cCCccccCCCCHHHHHHHhhCCCcEEEEccccccccCHHHHHHHHHHHhhCCCEEEEEcCCCCcc-hhhccCCcccCcce
Confidence 99999999999999999999999999998763 5789999999999999999998743221 13567899999999
Q ss_pred EEeeEEEecccCCCCCCceeEEEEeCCCCCCCcccccCCCCCccCCCCCHHHHHHhCCccCCCCeEEEeHhHHHhhcCeE
Q psy14118 181 SITRIKYVDISTPNTSGKIPLIRMRNPWGNEAEWNGAWSDKSQEWRFIPDHEKRELGLTFDDDGEFWMSYKDFLKYFSRL 260 (766)
Q Consensus 181 sv~~v~~~~~~~~~~~~~~~ll~lrNPWg~~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~Fwm~~~df~~~F~~~ 260 (766)
+|+++.+++ ..++|||+|||||| ..+|+|+||+.|++|... +..++.+.....+||+|||+|+||+++|+.+
T Consensus 240 ~Vl~~~~~~------~~~~~lv~lrNPWg-~~~w~G~ws~~~~~w~~~-~~~~~~~~~~~~~dG~Fwm~~~df~~~F~~~ 311 (315)
T cd00044 240 SVLDVREVQ------EEGLRLLRLRNPWG-VGEWWGGWSDDSSEWWVI-DAERKKLLLSGKDDGEFWMSFEDFLRNFDGL 311 (315)
T ss_pred EEeEEEEEc------cCceEEEEecCCcc-CCCccCCCCCCCchhccC-hHHHHHhcCCCCCCCEEEEEhHHhheeeCeE
Confidence 999999971 13899999999999 999999999999999844 4667777778889999999999999999999
Q ss_pred EEEe
Q psy14118 261 EICN 264 (766)
Q Consensus 261 ~vc~ 264 (766)
+||+
T Consensus 312 ~vc~ 315 (315)
T cd00044 312 YVCN 315 (315)
T ss_pred EEeC
Confidence 9995
No 4
>PF00648 Peptidase_C2: Calpain family cysteine protease This is family C2 in the peptidase classification. ; InterPro: IPR001300 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C2 (calpain family, clan CA). A type example is calpain, which is an intracellular protease involved in many important cellular functions that are regulated by calcium []. The protein is a complex of 2 polypeptide chains (light and heavy), with three known forms in mammals [, ]: a highly calcium-sensitive (i.e., micro-molar range) form known as mu-calpain, mu-CANP or calpain I; a form sensitive to calcium in the milli-molar range, known as m-calpain, m-CANP or calpain II; and a third form, known as p94, which is found in skeletal muscle only []. All forms have identical light but different heavy chains. Both mu- and m-calpain are heterodimers containing an identical 28kDa subunit and an 80kDa subunit that shares 55-65% sequence homology between the two proteases [, ]. The crystallographic structure of m-calpain reveals six "domains" in the 80kDa subunit: A 19-amino acid NH2-terminal sequence; Active site domain IIa; Active site domain IIb. Domain 2 shows low levels of sequence similarity to papain; although the catalytic His has not been located by biochemical means, it is likely that calpain and papain are related []. Domain III; An 18-amino acid extended sequence linking domain III to domain IV; Domain IV, which resembles the penta EF-hand family of polypeptides, binds calcium and regulates activity []. />]. Ca2+-binding causes a rearrangement of the protein backbone, the net effect of which is that a Trp side chain, which acts as a wedge between catalytic domains IIa and IIb in the apo state, moves away from the active site cleft allowing for the proper formation of the catalytic triad []. Calpain-like mRNAs have been identified in other organisms including bacteria, but the molecules encoded by these mRNAs have not been isolated, so little is known about their properties. How calpain activity is regulated in these organisms cells is still unclear In metazoans, the activity of calpain is controlled by a single proteinase inhibitor, calpastatin (IPR001259 from INTERPRO). The calpastatin gene can produce eight or more calpastatin polypeptides ranging from 17 to 85 kDa by use of different promoters and alternative splicing events. The physiological significance of these different calpastatins is unclear, although all bind to three different places on the calpain molecule; binding to at least two of the sites is Ca2+ dependent. The calpains ostensibly participate in a variety of cellular processes including remodelling of cytoskeletal/membrane attachments, different signal transduction pathways, and apoptosis. Deregulated calpain activity following loss of Ca2+ homeostasis results in tissue damage in response to events such as myocardial infarcts, stroke, and brain trauma []. Calpains are a family of cytosolic cysteine proteinases (see PDOC00126 from PROSITEDOC). Members of the calpain family are believed to function in various biological processes, including integrin-mediated cell migration, cytoskeletal remodeling, cell differentiation and apoptosis [, ]. The calpain family includes numerous members from C. elegans to mammals and with homologues in yeast and bacteria. The best characterised members are the m- and mu-calpains, both proteins are heterodimer composed of a large catalytic subunit and a small regulatory subunit. The large subunit comprises four domains (dI-dIV) while the small subunit has two domains (dV-dVI). Domain dI is a short region cleaved by autolysis, dII is the catalytic core, dIII is a C2-like domain, dIV consists of five calcium binding EF-hand motifs []. The crystal structure of calpain has been solved [, ]. The catalytic region consists of two distinct structural domains (dIIa and dIIb). dIIa contains a central helix flanked on three faces by a cluster of alpha-helices and is entirely unrelated to the corresponding domain in the typical thiol proteinases. The fold of dIIb is similar to the corresponding domain in other cysteine proteinases and contains two three-stranded anti-parallel beta-sheets. The catalytic triad residues (C,H,N) are located in dIIa and dIIb. The activation of the domain is dependent on the binding of two calcium atoms in two non EF-hand calcium binding sites located in the catalytic core, one close to the Cys active site in dIIa and one at the end of dIIb. Calcium-binding induced conformational changes in the catalytic domain which align the active site [][]. The profile covers the whole catalytic domain.; GO: 0004198 calcium-dependent cysteine-type endopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 2NQA_A 1KFU_L 1KFX_L 1QXP_B 2R9C_A 1TL9_A 2G8E_A 1KXR_B 2G8J_A 2NQG_A ....
Probab=100.00 E-value=9.9e-55 Score=466.78 Aligned_cols=229 Identities=47% Similarity=0.913 Sum_probs=190.7
Q ss_pred ceeCCCCCCCCCCcccCCCCCCceEeeCCC--------------------------------------------------
Q psy14118 33 LFEDPDFPCDDSSIFYSKMPPKSFEWMRPM-------------------------------------------------- 62 (766)
Q Consensus 33 ~f~D~~Fp~~~~sl~~~~~~~~~~~w~Rp~-------------------------------------------------- 62 (766)
+|+||+|||+.+||+.+......++|+||+
T Consensus 1 ~f~D~~Fpp~~~Sl~~~~~~~~~~~W~R~~e~~~~~~~~~~~~~~~di~QG~lgDc~llaaL~~la~~~~~i~~i~~~~~ 80 (298)
T PF00648_consen 1 LFEDPEFPPNDSSLGFDDQKPKNVEWKRPSEICENPQFFIDGISPSDIRQGSLGDCWLLAALAALAEHPDLIKKIFPVNQ 80 (298)
T ss_dssp ----TTS-SSHHHHTSSTTSTTT-EEE-HHHHSSS-BSSSSSSSGGGEBE-SSSSHHHHHHHHHHTTSHHHHHHHS-SS-
T ss_pred CccCCCCccCccccccCCCCCCcceeEechhcCCCCeEEECCCccccccccccCChhHHHHHHHHHhccccccccccccc
Confidence 699999999999999887777889999988
Q ss_pred ----------------CCeEEEEEeceeeeccCCcEEEEecCCCCchhHHHHHHHhhhhcCCcccccCCChhhhhhhccC
Q psy14118 63 ----------------YGRWVDVVIDDRLPTYYGKLVFLHSSTDNEFWSALLEKAYAKLHGSYEALKGGSTCEAMEDFTG 126 (766)
Q Consensus 63 ----------------~G~W~~V~VDD~lP~~~g~~~~~~s~~~~e~W~~LlEKAyAKl~GsY~~l~gg~~~~al~dlTG 126 (766)
+|+|++|+|||+|||.+|+|+|++|.+++|+||+||||||||+||||++|.||++.+||++|||
T Consensus 81 ~~~~~~~G~y~v~l~~~G~w~~V~VDd~lP~~~g~~~f~~s~~~~elW~~LlEKAyAKl~GsY~~l~gg~~~~al~~LTG 160 (298)
T PF00648_consen 81 SFNENYNGIYTVRLFKNGEWREVTVDDRLPCKNGKPLFARSSDPNELWPSLLEKAYAKLHGSYSALEGGNPSEALQDLTG 160 (298)
T ss_dssp -SSTT-SSEEEEEEEETTEEEEEEEES-EEEETTEESSSBESSTTB-HHHHHHHHHHHHTTSSGGGSSBSHHHHHHHHHS
T ss_pred ccccccCceeeEeeccCCeeeeeccchhhhccccceeeeccCCcccchhhhhhchhhhccccccccCCCChhhhhHhhcC
Confidence 8999999999999999999999999899999999999999999999999999999999999999
Q ss_pred CeeEEEEcCCC--chHHHHHHHHHhhcCCceeeecCCC-CcccccccCCCCCCCceeEEeeEEEecccCCCCCCceeEEE
Q psy14118 127 GVSEMYELNEA--PSNLWQILLKAHERSSLMGCSIEPD-PSVLEMQTPQGLVKGHAYSITRIKYVDISTPNTSGKIPLIR 203 (766)
Q Consensus 127 ~~~~~~~l~~~--~~~lw~~l~~~~~~g~l~~~~~~~~-~~~~~~~~~~GL~~~haYsv~~v~~~~~~~~~~~~~~~ll~ 203 (766)
+|++.+.+++. ..++|+.+.+..+++.+++|.+... ....+.....||+++|||+|++++++. ..+.+++||+
T Consensus 161 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~HaY~Vl~~~~~~----~~~~~~~lv~ 236 (298)
T PF00648_consen 161 GPPESIDLRDDSSDDELWELWKKLLKSGSLVGCSTGSSTPFDSEEYEKNGLVPGHAYAVLDVREVN----GNGEGHRLVK 236 (298)
T ss_dssp SEEEEEEGGG--T--THHHHHHHHHHCT-EEEEE--SSSGGGTTSBCTTSBBTTS-EEEEEEEEEE----ETTEEEEEEE
T ss_pred CcceeeeccccchhhhHHHHHHHHHHhccccccccccccccccccccccCcccceeEEEEEEEeec----cccceeEEEE
Confidence 99999999763 3579999999999999999887633 233445678999999999999999972 1345699999
Q ss_pred EeCCCCCCCcccccCCCCCccCCCCCHHHHHHhCCccCCCCeEEEeHhHHHhhcCeEEEEecC
Q psy14118 204 MRNPWGNEAEWNGAWSDKSQEWRFIPDHEKRELGLTFDDDGEFWMSYKDFLKYFSRLEICNLS 266 (766)
Q Consensus 204 lrNPWg~~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~Fwm~~~df~~~F~~~~vc~~~ 266 (766)
|||||| ..+|+|+||+.|++|+.+.++++++++....+||+|||+|+||+++|+.|+||++.
T Consensus 237 LrNPwg-~~~w~G~ws~~s~~W~~~~~~~~~~~~~~~~~dg~FWM~~~df~~~F~~i~vc~~~ 298 (298)
T PF00648_consen 237 LRNPWG-STEWKGDWSDDSPEWTEIHPSLRKRLNQSSSDDGTFWMSFEDFLKYFSSIYVCRLT 298 (298)
T ss_dssp EE-TTS-S---SSTTSTTSGGGGGS-HHHHHHHTTTSSSSSEEEEEHHHHHHHSEEEEEEESC
T ss_pred EcCCCc-cccccccccccccccccCCHHHHhhcccccccCccHhHhHHHHHhhCCceEEEeeC
Confidence 999999 99999999999999998888899999999889999999999999999999999974
No 5
>cd00214 Calpain_III Calpain, subdomain III. Calpains are calcium-activated cytoplasmic cysteine proteinases, participate in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction. Catalytic domain and the two calmodulin-like domains are separated by C2-like domain III. Domain III plays an important role in calcium-induced activation of calpain involving electrostatic interactions with subdomain II. Proposed to mediate calpain's interaction with phospholipids and translocation to cytoplasmic/nuclear membranes. CD includes subdomain III of typical and atypical calpains.
Probab=100.00 E-value=2.3e-33 Score=269.68 Aligned_cols=149 Identities=58% Similarity=1.011 Sum_probs=133.0
Q ss_pred ceeEEEEeeeeeeCCcCCCCccCccccccCCeEEEEEecccCCCCCCceEEEEEEEeccchhhhccCCceeeeeEEEEEe
Q psy14118 361 KWEMSVYEGEWVRGVTAGGCRNYLETFWCNPQFKITLTEVDENDEDGKCTVIIGLMQKNRRAQKKTGAECLTIGFAVYQI 440 (766)
Q Consensus 361 ~w~~~~~~G~W~~g~tAGG~~~~~~tf~~NPQy~l~v~~~~~~~~~~~~~v~i~L~Q~~~r~~~~~~~~~~~Igf~v~~v 440 (766)
.|....++|+|+.|.|||||.+++.||++||||.|+|.++++ ++++|+|+|+|+|+++|..+..+.+..+|||+||++
T Consensus 2 ~W~~~~~~G~W~~g~tAGGc~~~~~tf~~NPQf~l~v~~~~~--~~~~~~v~i~L~q~~~r~~~~~~~~~~~IGf~v~~~ 79 (150)
T cd00214 2 KWHTKSFNGEWRRGQTAGGCRNNPDTFWTNPQFRIRVPEPDD--DEGKCTVLIALMQKNRRHLRKKGLDLLTIGFHVYKV 79 (150)
T ss_pred cceEEEEeCeEeCCcccCCCCCcccccccCceEEEEecCCCC--CCCccEEEEEeccCCcchhcccCCCcceEEEEEEEe
Confidence 599999999999999999999988999999999999998653 245699999999999888777777889999999999
Q ss_pred cCCCCCCCCCCcccccccCCCcCCccccccceeeeeeeecCCceEEEcCCCCCCCccCceeEEeecCCCCcccC
Q psy14118 441 EDPDNVPTPLDLNFFKYNASCARAPSFINLREVSCRFKLPPGVYCIVPSTFEPNEEGEFILRVFSEHKNNMEEN 514 (766)
Q Consensus 441 ~~~~~~~~~l~~~~~~~~~~~~~s~~y~~~rev~~~~~L~pG~Y~IVPsT~~p~~~g~F~LrV~s~~~~~~~~~ 514 (766)
+.. ...+++.+|..+.+++.++.|.+.|+|+.++.|+||.|+||||||+|+++|+|.|||||+.++.+.++
T Consensus 80 ~~~---~~~~~~~~~~~~~~~~~s~~~~~~rev~~~~~L~pG~YvIIPsT~~p~~~g~F~LrVfs~~~~~~~~~ 150 (150)
T cd00214 80 PGE---NRHLRRDFFLHKAPRARSSTFINTREVSLRFRLPPGEYVIVPSTFEPGEEGEFLLRVFSEKSIKSSEL 150 (150)
T ss_pred CCc---CcccChhhhhccCcccccCccccccEEEEEEEcCCCCEEEEeeecCCCCcccEEEEEEecCCCccccC
Confidence 753 23566777887888889999999999999999999999999999999999999999999999988764
No 6
>smart00720 calpain_III calpain_III.
Probab=99.97 E-value=2.4e-31 Score=254.17 Aligned_cols=142 Identities=58% Similarity=1.017 Sum_probs=126.7
Q ss_pred eeEEEEeeeeeeCCcCCCCccCccccccCCeEEEEEecccCCCCCCceEEEEEEEeccchhhhccCCceeeeeEEEEEec
Q psy14118 362 WEMSVYEGEWVRGVTAGGCRNYLETFWCNPQFKITLTEVDENDEDGKCTVIIGLMQKNRRAQKKTGAECLTIGFAVYQIE 441 (766)
Q Consensus 362 w~~~~~~G~W~~g~tAGG~~~~~~tf~~NPQy~l~v~~~~~~~~~~~~~v~i~L~Q~~~r~~~~~~~~~~~Igf~v~~v~ 441 (766)
|+...++|+|++|.|||||++++.||++||||.|+|.++++ ..|+|+|+|+|+++|..+..+....+|||+||+++
T Consensus 1 w~~~~~~G~W~~~~tAGG~~~~~~tf~~NPqy~l~v~~~~~----~~~~v~i~L~q~~~r~~~~~~~~~~~iGf~v~~~~ 76 (143)
T smart00720 1 WHTKSVQGSWTRGQTAGGCRNYPATFWTNPQFRITLEEPDD----DDCTVLIALMQKNRRRLRRKGADFLTIGFAVYKVP 76 (143)
T ss_pred CcEEEEeCeEECCCccCCccccccccccCCeEEEEecCCCC----CceEEEEEecccCcccccccCCccceEeEEEEEec
Confidence 78899999999899999999998899999999999987542 24899999999999877766678899999999997
Q ss_pred CCCCCCCCCCcccccccCCCcCCccccccceeeeeeeecCCceEEEcCCCCCCCccCceeEEeecCCCCc
Q psy14118 442 DPDNVPTPLDLNFFKYNASCARAPSFINLREVSCRFKLPPGVYCIVPSTFEPNEEGEFILRVFSEHKNNM 511 (766)
Q Consensus 442 ~~~~~~~~l~~~~~~~~~~~~~s~~y~~~rev~~~~~L~pG~Y~IVPsT~~p~~~g~F~LrV~s~~~~~~ 511 (766)
... .+++.++....+++.++.|.++|+|+.++.|+||.|+||||||+|+++|+|.|||||+.++.+
T Consensus 77 ~~~----~~~~~~~~~~~~~~~s~~y~~~r~v~~~~~L~~G~Y~iVPsT~~p~~~g~F~LrV~s~~~~~l 142 (143)
T smart00720 77 KEL----HLRRDFFLSNAPRASSGDYINGREVSERFRLPPGEYVIVPSTFEPNQEGDFLLRVFSEGPFKL 142 (143)
T ss_pred ccc----ccchhhhhccCccccccccccCeEEEEEEEcCCCCEEEEEeecCCCCccCEEEEEEecCcccc
Confidence 431 456777777788888999999999999999999999999999999999999999999998865
No 7
>PF01067 Calpain_III: Calpain large subunit, domain III; InterPro: IPR022682 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C2 (calpain family, clan CA). A type example is calpain, which is an intracellular protease involved in many important cellular functions that are regulated by calcium []. The protein is a complex of 2 polypeptide chains (light and heavy), with three known forms in mammals [, ]: a highly calcium-sensitive (i.e., micro-molar range) form known as mu-calpain, mu-CANP or calpain I; a form sensitive to calcium in the milli-molar range, known as m-calpain, m-CANP or calpain II; and a third form, known as p94, which is found in skeletal muscle only []. All forms have identical light but different heavy chains. Both mu- and m-calpain are heterodimers containing an identical 28kDa subunit and an 80kDa subunit that shares 55-65% sequence homology between the two proteases [, ]. The crystallographic structure of m-calpain reveals six "domains" in the 80kDa subunit: A 19-amino acid NH2-terminal sequence; Active site domain IIa; Active site domain IIb. Domain 2 shows low levels of sequence similarity to papain; although the catalytic His has not been located by biochemical means, it is likely that calpain and papain are related []. Domain III; An 18-amino acid extended sequence linking domain III to domain IV; Domain IV, which resembles the penta EF-hand family of polypeptides, binds calcium and regulates activity []. />]. Ca2+-binding causes a rearrangement of the protein backbone, the net effect of which is that a Trp side chain, which acts as a wedge between catalytic domains IIa and IIb in the apo state, moves away from the active site cleft allowing for the proper formation of the catalytic triad []. Calpain-like mRNAs have been identified in other organisms including bacteria, but the molecules encoded by these mRNAs have not been isolated, so little is known about their properties. How calpain activity is regulated in these organisms cells is still unclear In metazoans, the activity of calpain is controlled by a single proteinase inhibitor, calpastatin (IPR001259 from INTERPRO). The calpastatin gene can produce eight or more calpastatin polypeptides ranging from 17 to 85 kDa by use of different promoters and alternative splicing events. The physiological significance of these different calpastatins is unclear, although all bind to three different places on the calpain molecule; binding to at least two of the sites is Ca2+ dependent. The calpains ostensibly participate in a variety of cellular processes including remodelling of cytoskeletal/membrane attachments, different signal transduction pathways, and apoptosis. Deregulated calpain activity following loss of Ca2+ homeostasis results in tissue damage in response to events such as myocardial infarcts, stroke, and brain trauma []. This entry represents domain III. It is found in association with PF00648 from PFAM. The function of the domain III and I are currently unknown. Domain II is a cysteine protease and domain IV is a calcium binding domain. Calpains are believed to participate in intracellular signaling pathways mediated by calcium ions. ; PDB: 1QXP_B 2QFE_A 1DF0_A 1U5I_A 3DF0_A 3BOW_A 1KFU_L 1KFX_L.
Probab=99.96 E-value=7.7e-29 Score=238.23 Aligned_cols=146 Identities=47% Similarity=0.883 Sum_probs=114.8
Q ss_pred ceeEEEEeeeeeeCCcCCCCccCccccccCCeEEEEEecccCCCCCCceEEEEEEEeccchhhhccCCceeeeeEEEEEe
Q psy14118 361 KWEMSVYEGEWVRGVTAGGCRNYLETFWCNPQFKITLTEVDENDEDGKCTVIIGLMQKNRRAQKKTGAECLTIGFAVYQI 440 (766)
Q Consensus 361 ~w~~~~~~G~W~~g~tAGG~~~~~~tf~~NPQy~l~v~~~~~~~~~~~~~v~i~L~Q~~~r~~~~~~~~~~~Igf~v~~v 440 (766)
.|+..+++|+|..|.|||||.+++.+|++||||.|+|..+++. ..+|+|+|+|+|++++..+..+.+..+|||+||++
T Consensus 1 ~W~~~~~~G~W~~~~taGG~~~~~~s~~~NPQy~l~v~~~~~~--~~~~~v~i~L~q~~~~~~~~~~~~~~~Ig~~v~~~ 78 (147)
T PF01067_consen 1 KWHTVTIEGEWVTGNTAGGCPNNPYSWWNNPQYRLTVSEPTEE--SNKCTVVISLMQKDRRRKRDVGEKDLPIGFYVFKV 78 (147)
T ss_dssp EEEEEEEEEEE-TTTS---STT-TTTGGGS-EEEEEESSGCCC--SSBEEEEEEEEECSGCCGCSTTTTTSEEEEEEEEE
T ss_pred CeeEEEEeCEEeCCCcCCCCcccccccccCcEEEEEEcCCCCC--cceeEEEEEEEecCcchhhcccccceEEeEEEEee
Confidence 4999999999988999999999977999999999999987632 12689999999999887665556789999999999
Q ss_pred cCCCCCCCCCCcccccccCCCcCCccccccceeeeeeeecCCceEEEcCCCCCCCccCceeEEeecCCCCc
Q psy14118 441 EDPDNVPTPLDLNFFKYNASCARAPSFINLREVSCRFKLPPGVYCIVPSTFEPNEEGEFILRVFSEHKNNM 511 (766)
Q Consensus 441 ~~~~~~~~~l~~~~~~~~~~~~~s~~y~~~rev~~~~~L~pG~Y~IVPsT~~p~~~g~F~LrV~s~~~~~~ 511 (766)
.. ....++..++.....++.++.|.+.|+|+..+.|+||.|+||||||+|+++|+|.|||||+.++++
T Consensus 79 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~L~~G~YvIVPsT~~~~~~g~F~L~v~s~~~~~l 146 (147)
T PF01067_consen 79 QS---QQKRLPRQYFLFNKPVVSSGDYSNSREVSEEFTLPPGTYVIVPSTYEPGQEGEFTLRVFSDSPFEL 146 (147)
T ss_dssp TT---TTSE--HHHHHTS-SSEE-SSEBSSSEEEEEEEE-SEEEEEEEEESSTT--EEEEEEEEESSSEEE
T ss_pred ec---ccccCCcceeccccceeeccccccceEEEEEEEcCCCCEEEEEecCCCCCeeeEEEEEEECCCccc
Confidence 31 134455666666678888999999999999999999999999999999999999999999999875
No 8
>KOG0037|consensus
Probab=99.93 E-value=5.7e-25 Score=213.57 Aligned_cols=165 Identities=35% Similarity=0.670 Sum_probs=156.6
Q ss_pred hHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhcccc
Q psy14118 540 KTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNAC 618 (766)
Q Consensus 540 ~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (766)
.-..+...|+..| ++.|.|+.+||+++|...
T Consensus 55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~------------------------------------------------ 86 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNG------------------------------------------------ 86 (221)
T ss_pred ccHHHHHHHHhhCccccccccHHHHHHHhhcC------------------------------------------------
Confidence 4557888999998 999999999999999653
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHHHHHHHHhhhhcCCCCcccCHHHHHHHHHH
Q psy14118 619 RDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDIRNWKSVFKMYDQENSGYLSPFELRQALTS 698 (766)
Q Consensus 619 ~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~L~~ 698 (766)
....++.+.|+.|+..||.+.+|+|+++||..+|..+..|+.+|+.||+|++|+|+..||+.+|..
T Consensus 87 --------------~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i~~Wr~vF~~~D~D~SG~I~~sEL~~Al~~ 152 (221)
T KOG0037|consen 87 --------------TWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYINQWRNVFRTYDRDRSGTIDSSELRQALTQ 152 (221)
T ss_pred --------------CCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHHHHHHHHHHhcccCCCCcccHHHHHHHHHH
Confidence 357899999999999999999999999999999999999999999999999999999999999999
Q ss_pred hCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHHHHHHHHhccCCCCCceEEeCHHHHHHHHhcC
Q psy14118 699 AGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLKTMIDLFKARDPSSTNKATFTLEEWVENTLYS 766 (766)
Q Consensus 699 ~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~~~~~~F~~~D~d~~G~I~lt~~ef~~~~~~~ 766 (766)
+|+.++++..+.++++|| -++|.|.|++|+.+++.+..++++|+.+|.+.+|.|++++++|++++||.
T Consensus 153 ~Gy~Lspq~~~~lv~kyd~~~~g~i~FD~FI~ccv~L~~lt~~Fr~~D~~q~G~i~~~y~dfl~~t~~~ 221 (221)
T KOG0037|consen 153 LGYRLSPQFYNLLVRKYDRFGGGRIDFDDFIQCCVVLQRLTEAFRRRDTAQQGSITISYDDFLQMTMSI 221 (221)
T ss_pred cCcCCCHHHHHHHHHHhccccCCceeHHHHHHHHHHHHHHHHHHHHhccccceeEEEeHHHHHHHhhcC
Confidence 999999999999999999 44999999999999999999999999999999999999999999999985
No 9
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.80 E-value=1.5e-18 Score=164.54 Aligned_cols=134 Identities=24% Similarity=0.375 Sum_probs=126.0
Q ss_pred cchhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 536 EKEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
-++++++++++.|+.+| +++|.|+..||..+|+.+
T Consensus 14 ~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~l-------------------------------------------- 49 (160)
T COG5126 14 LTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSL-------------------------------------------- 49 (160)
T ss_pred CCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHc--------------------------------------------
Confidence 46889999999999999 999999999999999864
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCccc
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYL 687 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~I 687 (766)
+.++++.++..||..+|. +++.|+|.+|+.++... ++++.+|+.||+|++|+|
T Consensus 50 -------------------g~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~~~Eel~~aF~~fD~d~dG~I 109 (160)
T COG5126 50 -------------------GFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGDKEEELREAFKLFDKDHDGYI 109 (160)
T ss_pred -------------------CCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCCcHHHHHHHHHHhCCCCCcee
Confidence 567889999999999999 99999999999999864 789999999999999999
Q ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHH
Q psy14118 688 SPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVR 733 (766)
Q Consensus 688 s~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~ 733 (766)
+..||+.+|+.+|..+++++++.|++.++ |+||.|+|++|+..+..
T Consensus 110 s~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG~i~~~eF~~~~~~ 156 (160)
T COG5126 110 SIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDGEIDYEEFKKLIKD 156 (160)
T ss_pred cHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCceEeHHHHHHHHhc
Confidence 99999999999999999999999999999 99999999999998753
No 10
>KOG0027|consensus
Probab=99.76 E-value=1e-17 Score=161.64 Aligned_cols=133 Identities=23% Similarity=0.465 Sum_probs=124.3
Q ss_pred chhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhc
Q psy14118 537 KEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICG 615 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (766)
+..+...++.+|+.+| +++|.|+..||..+++.+
T Consensus 3 ~~~~~~el~~~F~~fD~d~~G~i~~~el~~~lr~l--------------------------------------------- 37 (151)
T KOG0027|consen 3 SEEQILELKEAFQLFDKDGDGKISVEELGAVLRSL--------------------------------------------- 37 (151)
T ss_pred CHHHHHHHHHHHHHHCCCCCCcccHHHHHHHHHHc---------------------------------------------
Confidence 4567889999999998 999999999999999876
Q ss_pred cccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-----------HHHHHHhhhhcCCCC
Q psy14118 616 NACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-----------RNWKSVFKMYDQENS 684 (766)
Q Consensus 616 ~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-----------~~l~~~F~~~D~d~~ 684 (766)
+..+++.++..+++.+|.+++|.|+++||+.++... +.++++|+.||+|++
T Consensus 38 ------------------g~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~el~eaF~~fD~d~~ 99 (151)
T KOG0027|consen 38 ------------------GQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSEELKEAFRVFDKDGD 99 (151)
T ss_pred ------------------CCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHHHHHHHHHHHccCCC
Confidence 456889999999999999999999999999998864 289999999999999
Q ss_pred cccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHH
Q psy14118 685 GYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAV 732 (766)
Q Consensus 685 G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~ 732 (766)
|+|+..||+.+|..+|..++.++++.+++.+| |+||.|+|++|+.+|.
T Consensus 100 G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i~f~ef~~~m~ 148 (151)
T KOG0027|consen 100 GFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKVNFEEFVKMMS 148 (151)
T ss_pred CcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeEeHHHHHHHHh
Confidence 99999999999999999999999999999999 9999999999999875
No 11
>KOG0028|consensus
Probab=99.65 E-value=2.8e-15 Score=138.70 Aligned_cols=135 Identities=20% Similarity=0.319 Sum_probs=123.8
Q ss_pred cchhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 536 EKEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
-++++.+.++..|..++ +++|.||..||..++..+
T Consensus 27 l~~~q~q~i~e~f~lfd~~~~g~iD~~EL~vAmral-------------------------------------------- 62 (172)
T KOG0028|consen 27 LTEEQKQEIKEAFELFDPDMAGKIDVEELKVAMRAL-------------------------------------------- 62 (172)
T ss_pred ccHHHHhhHHHHHHhhccCCCCcccHHHHHHHHHHc--------------------------------------------
Confidence 35667789999999998 999999999999988775
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCccc
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYL 687 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~I 687 (766)
+..+..+++..|+..+|.++.|.|+|++|+..+... ++++.+|+.+|.|++|+|
T Consensus 63 -------------------GFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~afrl~D~D~~Gki 123 (172)
T KOG0028|consen 63 -------------------GFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKAFRLFDDDKTGKI 123 (172)
T ss_pred -------------------CCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHHHHcccccCCCCc
Confidence 456778999999999999999999999999987653 789999999999999999
Q ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHH
Q psy14118 688 SPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVR 733 (766)
Q Consensus 688 s~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~ 733 (766)
+..+|+.+.+.+|.+++++++.+|+..+| ++||.|+-+||..+|.+
T Consensus 124 s~~~lkrvakeLgenltD~El~eMIeEAd~d~dgevneeEF~~imk~ 170 (172)
T KOG0028|consen 124 SQRNLKRVAKELGENLTDEELMEMIEEADRDGDGEVNEEEFIRIMKK 170 (172)
T ss_pred CHHHHHHHHHHhCccccHHHHHHHHHHhcccccccccHHHHHHHHhc
Confidence 99999999999999999999999999999 99999999999998753
No 12
>PTZ00184 calmodulin; Provisional
Probab=99.63 E-value=7.7e-15 Score=140.47 Aligned_cols=133 Identities=21% Similarity=0.414 Sum_probs=119.7
Q ss_pred chhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhc
Q psy14118 537 KEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICG 615 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (766)
++++.+.++..|..+| +++|.|+..||..+|..+
T Consensus 6 ~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~--------------------------------------------- 40 (149)
T PTZ00184 6 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSL--------------------------------------------- 40 (149)
T ss_pred CHHHHHHHHHHHHHHcCCCCCcCCHHHHHHHHHHh---------------------------------------------
Confidence 4667788999999998 899999999999999764
Q ss_pred cccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCcccC
Q psy14118 616 NACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYLS 688 (766)
Q Consensus 616 ~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~Is 688 (766)
+..++.+.++.+++.+|.+++|.|+|+||+.++... ..++.+|+.+|.+++|+|+
T Consensus 41 ------------------~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~F~~~D~~~~g~i~ 102 (149)
T PTZ00184 41 ------------------GQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEAFKVFDRDGNGFIS 102 (149)
T ss_pred ------------------CCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHHHHhhCCCCCCeEe
Confidence 223456789999999999999999999999987753 5689999999999999999
Q ss_pred HHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHH
Q psy14118 689 PFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAV 732 (766)
Q Consensus 689 ~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~ 732 (766)
.+||+.++..+|..++.++++.++..+| +++|.|+|+||+.++.
T Consensus 103 ~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~ 147 (149)
T PTZ00184 103 AAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMMM 147 (149)
T ss_pred HHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCCcCcHHHHHHHHh
Confidence 9999999999999999999999999999 9999999999998864
No 13
>PTZ00183 centrin; Provisional
Probab=99.62 E-value=1.5e-14 Score=140.24 Aligned_cols=135 Identities=23% Similarity=0.334 Sum_probs=121.5
Q ss_pred cchhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 536 EKEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
-+.++.+.+..+|..+| +++|.|+..||..+|+..
T Consensus 11 ~~~~~~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~-------------------------------------------- 46 (158)
T PTZ00183 11 LTEDQKKEIREAFDLFDTDGSGTIDPKELKVAMRSL-------------------------------------------- 46 (158)
T ss_pred CCHHHHHHHHHHHHHhCCCCCCcccHHHHHHHHHHh--------------------------------------------
Confidence 45777888999999999 999999999999999765
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCccc
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYL 687 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~I 687 (766)
+...+...+..+++.+|.+++|.|+|+||..++... +.++.+|+.+|.+++|+|
T Consensus 47 -------------------g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~F~~~D~~~~G~i 107 (158)
T PTZ00183 47 -------------------GFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKAFRLFDDDKTGKI 107 (158)
T ss_pred -------------------CCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHHHHHhCCCCCCcC
Confidence 233566789999999999999999999999987653 578999999999999999
Q ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHH
Q psy14118 688 SPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVR 733 (766)
Q Consensus 688 s~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~ 733 (766)
+.+||..++..+|..++..++..++..+| +++|.|+|++|+.++..
T Consensus 108 ~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g~i~~~ef~~~~~~ 154 (158)
T PTZ00183 108 SLKNLKRVAKELGETITDEELQEMIDEADRNGDGEISEEEFYRIMKK 154 (158)
T ss_pred cHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHhc
Confidence 99999999999999999999999999999 99999999999998754
No 14
>KOG0030|consensus
Probab=99.52 E-value=1.7e-13 Score=123.85 Aligned_cols=133 Identities=17% Similarity=0.313 Sum_probs=120.9
Q ss_pred chhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhc
Q psy14118 537 KEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICG 615 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (766)
++++...++.+|..+| .+||.|+..+....|+.+
T Consensus 6 ~~d~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRal--------------------------------------------- 40 (152)
T KOG0030|consen 6 TPDQMEEFKEAFLLFDRTGDGKISGSQVGDVLRAL--------------------------------------------- 40 (152)
T ss_pred CcchHHHHHHHHHHHhccCcccccHHHHHHHHHHh---------------------------------------------
Confidence 3455689999999999 899999999999999886
Q ss_pred cccCCCCccccccccccCCCCCCHHHHHHHHHhhcCC--CCccccHHHHHHHHHHH---------HHHHHHhhhhcCCCC
Q psy14118 616 NACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVD--RSGKLGFEEFQQLWKDI---------RNWKSVFKMYDQENS 684 (766)
Q Consensus 616 ~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d--~~G~I~~~EF~~~~~~~---------~~l~~~F~~~D~d~~ 684 (766)
+.++++.++.+.+...+.+ +-.+|+|++|+.++..+ +.+-+.++.||++++
T Consensus 41 ------------------G~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t~edfvegLrvFDkeg~ 102 (152)
T KOG0030|consen 41 ------------------GQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGTYEDFVEGLRVFDKEGN 102 (152)
T ss_pred ------------------cCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCcHHHHHHHHHhhcccCC
Confidence 5788999999999999877 55789999999999886 678899999999999
Q ss_pred cccCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCCcccHHHHHHHHH
Q psy14118 685 GYLSPFELRQALTSAGYHLNNHILNILAHRYSGRDARISFDDFMMCAV 732 (766)
Q Consensus 685 G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~dd~dG~Is~~EF~~~l~ 732 (766)
|+|...||+.+|..+|..+++++++.++....|++|.|+|+.|++.+.
T Consensus 103 G~i~~aeLRhvLttlGekl~eeEVe~Llag~eD~nG~i~YE~fVk~i~ 150 (152)
T KOG0030|consen 103 GTIMGAELRHVLTTLGEKLTEEEVEELLAGQEDSNGCINYEAFVKHIM 150 (152)
T ss_pred cceeHHHHHHHHHHHHhhccHHHHHHHHccccccCCcCcHHHHHHHHh
Confidence 999999999999999999999999999999889999999999998754
No 15
>KOG0031|consensus
Probab=99.51 E-value=5.1e-13 Score=122.86 Aligned_cols=130 Identities=18% Similarity=0.291 Sum_probs=119.7
Q ss_pred cchhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 536 EKEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
-+..+++++++.|..+| |+||.|+.++|+..|..+
T Consensus 26 f~q~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSl-------------------------------------------- 61 (171)
T KOG0031|consen 26 FDQSQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASL-------------------------------------------- 61 (171)
T ss_pred hhHHHHHHHHHHHHHHhccCCCcccHHHHHHHHHHc--------------------------------------------
Confidence 36789999999999999 999999999999999876
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCccc
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYL 687 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~I 687 (766)
+..++++++..|++.. .|-|+|.-|+.++... +.+..+|+.||.+++|+|
T Consensus 62 -------------------Gk~~~d~elDaM~~Ea----~gPINft~FLTmfGekL~gtdpe~~I~~AF~~FD~~~~G~I 118 (171)
T KOG0031|consen 62 -------------------GKIASDEELDAMMKEA----PGPINFTVFLTMFGEKLNGTDPEEVILNAFKTFDDEGSGKI 118 (171)
T ss_pred -------------------CCCCCHHHHHHHHHhC----CCCeeHHHHHHHHHHHhcCCCHHHHHHHHHHhcCccCCCcc
Confidence 4458899999999874 7899999999999864 679999999999999999
Q ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHH
Q psy14118 688 SPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAV 732 (766)
Q Consensus 688 s~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~ 732 (766)
..+.|+++|...|..+++++++.|++.+- |..|.|+|.+|+.++.
T Consensus 119 ~~d~lre~Ltt~gDr~~~eEV~~m~r~~p~d~~G~~dy~~~~~~it 164 (171)
T KOG0031|consen 119 DEDYLRELLTTMGDRFTDEEVDEMYREAPIDKKGNFDYKAFTYIIT 164 (171)
T ss_pred CHHHHHHHHHHhcccCCHHHHHHHHHhCCcccCCceeHHHHHHHHH
Confidence 99999999999999999999999999999 8999999999999875
No 16
>KOG0036|consensus
Probab=99.43 E-value=1.7e-12 Score=136.88 Aligned_cols=136 Identities=19% Similarity=0.344 Sum_probs=123.0
Q ss_pred cchhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 536 EKEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
..++.+.+++.+|+.+| +++|.||..+|.+.|.++
T Consensus 8 ~~~er~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l-------------------------------------------- 43 (463)
T KOG0036|consen 8 TDEERDIRIRCLFKELDSKNDGQVDLDQLEKGLEKL-------------------------------------------- 43 (463)
T ss_pred CcHHHHHHHHHHHHHhccCCCCceeHHHHHHHHHhc--------------------------------------------
Confidence 45777889999999999 899999999999999876
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-HHHHHHhhhhcCCCCcccCHHHHH
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-RNWKSVFKMYDQENSGYLSPFELR 693 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-~~l~~~F~~~D~d~~G~Is~~El~ 693 (766)
.......+.++.+|+.+|.|.+|.++|+||...+... .++.++|+..|.++||.|+.+|+.
T Consensus 44 ------------------~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~~E~~l~~~F~~iD~~hdG~i~~~Ei~ 105 (463)
T KOG0036|consen 44 ------------------DHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDNKELELYRIFQSIDLEHDGKIDPNEIW 105 (463)
T ss_pred ------------------CCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHHhHHHHHHHHhhhccccCCccCHHHHH
Confidence 1124556788899999999999999999999998865 679999999999999999999999
Q ss_pred HHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHH
Q psy14118 694 QALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVR 733 (766)
Q Consensus 694 ~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~ 733 (766)
..|+++|.++++++++.+++.+| ++++.|+++||...++.
T Consensus 106 ~~l~~~gi~l~de~~~k~~e~~d~~g~~~I~~~e~rd~~ll 146 (463)
T KOG0036|consen 106 RYLKDLGIQLSDEKAAKFFEHMDKDGKATIDLEEWRDHLLL 146 (463)
T ss_pred HHHHHhCCccCHHHHHHHHHHhccCCCeeeccHHHHhhhhc
Confidence 99999999999999999999999 99999999999988753
No 17
>KOG0034|consensus
Probab=99.34 E-value=1.7e-11 Score=120.77 Aligned_cols=138 Identities=22% Similarity=0.391 Sum_probs=113.0
Q ss_pred cchhhHHHHHHHHHHHc-C-CCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHH
Q psy14118 536 EKEKKTEAIRQFFQKLA-G-DDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALI 613 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d-~-~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (766)
-+..++..+...|.+++ + ++|.|+.+|+..+.....
T Consensus 27 fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~------------------------------------------ 64 (187)
T KOG0034|consen 27 FSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELAL------------------------------------------ 64 (187)
T ss_pred cCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhc------------------------------------------
Confidence 35778899999999998 6 899999999999993320
Q ss_pred hccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCcc-ccHHHHHHHHHHH-------HHHHHHhhhhcCCCCc
Q psy14118 614 CGNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGK-LGFEEFQQLWKDI-------RNWKSVFKMYDQENSG 685 (766)
Q Consensus 614 ~~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~-I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G 685 (766)
+ -....++..+|.+++|. |+|++|+.++... ++++-+|+.||.+++|
T Consensus 65 ----------------------N---p~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl~faF~vYD~~~~G 119 (187)
T KOG0034|consen 65 ----------------------N---PLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKLRFAFRVYDLDGDG 119 (187)
T ss_pred ----------------------C---cHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHHHHHHHHhcCCCCC
Confidence 0 12457899999998888 9999999998864 5899999999999999
Q ss_pred ccCHHHHHHHHHHh-CCCCC--HHH----HHHHHHHcc-CCCCcccHHHHHHHHHHHHHHHHH
Q psy14118 686 YLSPFELRQALTSA-GYHLN--NHI----LNILAHRYS-GRDARISFDDFMMCAVRLKTMIDL 740 (766)
Q Consensus 686 ~Is~~El~~~L~~~-g~~ls--~~~----~~~l~~~~d-d~dG~Is~~EF~~~l~~l~~~~~~ 740 (766)
+|+.+||..++..+ |...+ ++. ++.++..+| |+||+|+|+||.+++.+...+.+.
T Consensus 120 ~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~IsfeEf~~~v~~~P~~~~~ 182 (187)
T KOG0034|consen 120 FISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGKISFEEFCKVVEKQPDLLEK 182 (187)
T ss_pred cCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCcCcHHHHHHHHHcCccHHHH
Confidence 99999999999986 43444 443 566777899 999999999999998876555443
No 18
>KOG0044|consensus
Probab=99.33 E-value=3.1e-11 Score=118.95 Aligned_cols=143 Identities=14% Similarity=0.321 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHc--CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccc
Q psy14118 540 KTEAIRQFFQKLA--GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNA 617 (766)
Q Consensus 540 ~~~~~r~~F~~~d--~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (766)
..+.++..|+.+- -.+|.++..+++.++...+.
T Consensus 24 ~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp--------------------------------------------- 58 (193)
T KOG0044|consen 24 SKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFP--------------------------------------------- 58 (193)
T ss_pred CHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCC---------------------------------------------
Confidence 3456677777774 46899999999999988742
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH------HHHHHHhhhhcCCCCcccCHHH
Q psy14118 618 CRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI------RNWKSVFKMYDQENSGYLSPFE 691 (766)
Q Consensus 618 ~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~E 691 (766)
.+-+..-++.+|+.+|.|++|.|+|.||+..+..+ +.++-+|++||.|++|+|+.+|
T Consensus 59 -----------------~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~eekl~w~F~lyD~dgdG~It~~E 121 (193)
T KOG0044|consen 59 -----------------DGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLEEKLKWAFRLYDLDGDGYITKEE 121 (193)
T ss_pred -----------------CCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHHHHhhhhheeecCCCCceEcHHH
Confidence 12345677889999999999999999999998875 6788889999999999999999
Q ss_pred HHHHHHHh----CC-------CCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHHHHHHHHhcc
Q psy14118 692 LRQALTSA----GY-------HLNNHILNILAHRYS-GRDARISFDDFMMCAVRLKTMIDLFKAR 744 (766)
Q Consensus 692 l~~~L~~~----g~-------~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~~~~~~F~~~ 744 (766)
+..+++++ |. ....+.+..+|+.+| |+||.|+++||+..+.....+.+++..+
T Consensus 122 ml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg~lT~eef~~~~~~d~~i~~~l~~~ 186 (193)
T KOG0044|consen 122 MLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDGKLTLEEFIEGCKADPSILRALEQD 186 (193)
T ss_pred HHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCCcccHHHHHHHhhhCHHHHHHhhhc
Confidence 99888874 31 123566889999999 9999999999999998888887777554
No 19
>KOG0027|consensus
Probab=99.26 E-value=9.3e-11 Score=113.15 Aligned_cols=125 Identities=17% Similarity=0.247 Sum_probs=110.4
Q ss_pred CHHHHHHHHHhhcCCCCccccHHHHHHHHHHH------HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCC-----CHH
Q psy14118 638 SKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI------RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHL-----NNH 706 (766)
Q Consensus 638 s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~l-----s~~ 706 (766)
...+++.+|+.+|.+++|.|+-.|+..++..+ .++..+++.+|.|++|.|+.+||..++...+... +.+
T Consensus 6 ~~~el~~~F~~fD~d~~G~i~~~el~~~lr~lg~~~t~~el~~~~~~~D~dg~g~I~~~eF~~l~~~~~~~~~~~~~~~~ 85 (151)
T KOG0027|consen 6 QILELKEAFQLFDKDGDGKISVEELGAVLRSLGQNPTEEELRDLIKEIDLDGDGTIDFEEFLDLMEKLGEEKTDEEASSE 85 (151)
T ss_pred HHHHHHHHHHHHCCCCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHHhCCCCCCeEcHHHHHHHHHhhhcccccccccHH
Confidence 34678999999999999999999999999876 7899999999999999999999999999875432 345
Q ss_pred HHHHHHHHcc-CCCCcccHHHHHHHHHHH------HHHHHHHhccCCCCCceEEeCHHHHHHHHh
Q psy14118 707 ILNILAHRYS-GRDARISFDDFMMCAVRL------KTMIDLFKARDPSSTNKATFTLEEWVENTL 764 (766)
Q Consensus 707 ~~~~l~~~~d-d~dG~Is~~EF~~~l~~l------~~~~~~F~~~D~d~~G~I~lt~~ef~~~~~ 764 (766)
++.+.|+.+| |++|.|+.+|+..+|..+ ..+...++..|.|++|.| ++++|+.+..
T Consensus 86 el~eaF~~fD~d~~G~Is~~el~~~l~~lg~~~~~~e~~~mi~~~d~d~dg~i--~f~ef~~~m~ 148 (151)
T KOG0027|consen 86 ELKEAFRVFDKDGDGFISASELKKVLTSLGEKLTDEECKEMIREVDVDGDGKV--NFEEFVKMMS 148 (151)
T ss_pred HHHHHHHHHccCCCCcCcHHHHHHHHHHhCCcCCHHHHHHHHHhcCCCCCCeE--eHHHHHHHHh
Confidence 9999999999 999999999999999865 467778899999999966 8899998765
No 20
>COG5126 FRQ1 Ca2+-binding protein (EF-Hand superfamily) [Signal transduction mechanisms / Cytoskeleton / Cell division and chromosome partitioning / General function prediction only]
Probab=99.25 E-value=1.5e-10 Score=110.37 Aligned_cols=130 Identities=14% Similarity=0.177 Sum_probs=112.5
Q ss_pred CCCCCHHH---HHHHHHhhcCCCCccccHHHHHHHHHHH------HHHHHHhhhhcCCCCcccCHHHHHHHHHHh-CCCC
Q psy14118 634 EGGFSKDV---CRSMVAMLDVDRSGKLGFEEFQQLWKDI------RNWKSVFKMYDQENSGYLSPFELRQALTSA-GYHL 703 (766)
Q Consensus 634 ~~~~s~~~---i~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~-g~~l 703 (766)
...++.++ +++.|..+|.|++|.|++.|+..++..+ ..+.++|..+|. ++|.|+..+|..+|... ...-
T Consensus 11 ~~~~t~~qi~~lkeaF~l~D~d~~G~I~~~el~~ilr~lg~~~s~~ei~~l~~~~d~-~~~~idf~~Fl~~ms~~~~~~~ 89 (160)
T COG5126 11 FTQLTEEQIQELKEAFQLFDRDSDGLIDRNELGKILRSLGFNPSEAEINKLFEEIDA-GNETVDFPEFLTVMSVKLKRGD 89 (160)
T ss_pred cccCCHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHcCCCCcHHHHHHHHHhccC-CCCccCHHHHHHHHHHHhccCC
Confidence 34566655 5667889999999999999999999865 789999999999 99999999999999865 3556
Q ss_pred CHHHHHHHHHHcc-CCCCcccHHHHHHHHHHH------HHHHHHHhccCCCCCceEEeCHHHHHHHHhcC
Q psy14118 704 NNHILNILAHRYS-GRDARISFDDFMMCAVRL------KTMIDLFKARDPSSTNKATFTLEEWVENTLYS 766 (766)
Q Consensus 704 s~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l------~~~~~~F~~~D~d~~G~I~lt~~ef~~~~~~~ 766 (766)
+++++...|+.|| |+||+|+..+++.++..+ +.+.+.++.+|++++| .|++++|+.+++.+
T Consensus 90 ~~Eel~~aF~~fD~d~dG~Is~~eL~~vl~~lge~~~deev~~ll~~~d~d~dG--~i~~~eF~~~~~~~ 157 (160)
T COG5126 90 KEEELREAFKLFDKDHDGYISIGELRRVLKSLGERLSDEEVEKLLKEYDEDGDG--EIDYEEFKKLIKDS 157 (160)
T ss_pred cHHHHHHHHHHhCCCCCceecHHHHHHHHHhhcccCCHHHHHHHHHhcCCCCCc--eEeHHHHHHHHhcc
Confidence 7899999999999 999999999999999754 4677889999999999 55999999988754
No 21
>PTZ00183 centrin; Provisional
Probab=99.23 E-value=2.4e-10 Score=110.64 Aligned_cols=123 Identities=17% Similarity=0.258 Sum_probs=105.8
Q ss_pred HHHHHHHHHhhcCCCCccccHHHHHHHHHHH------HHHHHHhhhhcCCCCcccCHHHHHHHHHHh-CCCCCHHHHHHH
Q psy14118 639 KDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI------RNWKSVFKMYDQENSGYLSPFELRQALTSA-GYHLNNHILNIL 711 (766)
Q Consensus 639 ~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~-g~~ls~~~~~~l 711 (766)
..++..+|..+|.+++|.|+++||..++..+ ..+..+|..+|.+++|.|+..||..++... ......+.++.+
T Consensus 16 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~g~~~~~~~~~~l~~~~d~~~~g~i~~~eF~~~~~~~~~~~~~~~~l~~~ 95 (158)
T PTZ00183 16 KKEIREAFDLFDTDGSGTIDPKELKVAMRSLGFEPKKEEIKQMIADVDKDGSGKIDFEEFLDIMTKKLGERDPREEILKA 95 (158)
T ss_pred HHHHHHHHHHhCCCCCCcccHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCcEeHHHHHHHHHHHhcCCCcHHHHHHH
Confidence 4566778999999999999999999988754 568999999999999999999999987753 344567889999
Q ss_pred HHHcc-CCCCcccHHHHHHHHHHH------HHHHHHHhccCCCCCceEEeCHHHHHHHH
Q psy14118 712 AHRYS-GRDARISFDDFMMCAVRL------KTMIDLFKARDPSSTNKATFTLEEWVENT 763 (766)
Q Consensus 712 ~~~~d-d~dG~Is~~EF~~~l~~l------~~~~~~F~~~D~d~~G~I~lt~~ef~~~~ 763 (766)
|+.+| +++|.|+.+||..++..+ ..+..+|..+|.+++| .|++++|+.++
T Consensus 96 F~~~D~~~~G~i~~~e~~~~l~~~~~~l~~~~~~~~~~~~d~~~~g--~i~~~ef~~~~ 152 (158)
T PTZ00183 96 FRLFDDDKTGKISLKNLKRVAKELGETITDEELQEMIDEADRNGDG--EISEEEFYRIM 152 (158)
T ss_pred HHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCC--cCcHHHHHHHH
Confidence 99999 999999999999998753 4577789999999999 46999998765
No 22
>PTZ00184 calmodulin; Provisional
Probab=99.20 E-value=3.5e-10 Score=108.08 Aligned_cols=124 Identities=11% Similarity=0.201 Sum_probs=105.7
Q ss_pred HHHHHHHHHhhcCCCCccccHHHHHHHHHHH------HHHHHHhhhhcCCCCcccCHHHHHHHHHHh-CCCCCHHHHHHH
Q psy14118 639 KDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI------RNWKSVFKMYDQENSGYLSPFELRQALTSA-GYHLNNHILNIL 711 (766)
Q Consensus 639 ~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~-g~~ls~~~~~~l 711 (766)
.+.++..|..+|.+++|.|+++||..++..+ +.+..+|+.+|.+++|.|+.+||..++... ......+.+..+
T Consensus 10 ~~~~~~~F~~~D~~~~G~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g~i~~~ef~~~l~~~~~~~~~~~~~~~~ 89 (149)
T PTZ00184 10 IAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTLMARKMKDTDSEEEIKEA 89 (149)
T ss_pred HHHHHHHHHHHcCCCCCcCCHHHHHHHHHHhCCCCCHHHHHHHHHhcCcCCCCcCcHHHHHHHHHHhccCCcHHHHHHHH
Confidence 3566788999999999999999999988764 578999999999999999999999988764 233456778999
Q ss_pred HHHcc-CCCCcccHHHHHHHHHHH------HHHHHHHhccCCCCCceEEeCHHHHHHHHh
Q psy14118 712 AHRYS-GRDARISFDDFMMCAVRL------KTMIDLFKARDPSSTNKATFTLEEWVENTL 764 (766)
Q Consensus 712 ~~~~d-d~dG~Is~~EF~~~l~~l------~~~~~~F~~~D~d~~G~I~lt~~ef~~~~~ 764 (766)
|+.+| +++|.|+.+||..++... ..+..+|..+|.+++| .|+++||+.+++
T Consensus 90 F~~~D~~~~g~i~~~e~~~~l~~~~~~~~~~~~~~~~~~~d~~~~g--~i~~~ef~~~~~ 147 (149)
T PTZ00184 90 FKVFDRDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDG--QINYEEFVKMMM 147 (149)
T ss_pred HHhhCCCCCCeEeHHHHHHHHHHHCCCCCHHHHHHHHHhcCCCCCC--cCcHHHHHHHHh
Confidence 99999 999999999999888643 4567789999999999 569999998765
No 23
>KOG0044|consensus
Probab=99.13 E-value=8.4e-10 Score=108.89 Aligned_cols=128 Identities=21% Similarity=0.349 Sum_probs=111.6
Q ss_pred CCCCCHHHHHHHHHhhcCCC-CccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCH
Q psy14118 634 EGGFSKDVCRSMVAMLDVDR-SGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNN 705 (766)
Q Consensus 634 ~~~~s~~~i~~l~~~~D~d~-~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~ 705 (766)
.+.++..+++.+.+.|-.+. +|.|+.++|..++... .-...+|+.||.|++|+|+..||..+|...-....+
T Consensus 20 ~t~f~~~ei~~~Yr~Fk~~cP~G~~~~~~F~~i~~~~fp~gd~~~y~~~vF~~fD~~~dg~i~F~Efi~als~~~rGt~e 99 (193)
T KOG0044|consen 20 QTKFSKKEIQQWYRGFKNECPSGRLTLEEFREIYASFFPDGDASKYAELVFRTFDKNKDGTIDFLEFICALSLTSRGTLE 99 (193)
T ss_pred hcCCCHHHHHHHHHHhcccCCCCccCHHHHHHHHHHHCCCCCHHHHHHHHHHHhcccCCCCcCHHHHHHHHHHHcCCcHH
Confidence 47899999999999997765 8999999999999875 457899999999999999999999999887666778
Q ss_pred HHHHHHHHHcc-CCCCcccHHHHHHHHHHH-----------------HHHHHHHhccCCCCCceEEeCHHHHHHHH
Q psy14118 706 HILNILAHRYS-GRDARISFDDFMMCAVRL-----------------KTMIDLFKARDPSSTNKATFTLEEWVENT 763 (766)
Q Consensus 706 ~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l-----------------~~~~~~F~~~D~d~~G~I~lt~~ef~~~~ 763 (766)
+-+.-.|+.|| |+||.|+++|++.++..+ +...++|+.+|.|+|| .+|+++|+..+
T Consensus 100 ekl~w~F~lyD~dgdG~It~~Eml~iv~~i~~m~~~~~~~~~~~~~~~~v~~if~k~D~n~Dg--~lT~eef~~~~ 173 (193)
T KOG0044|consen 100 EKLKWAFRLYDLDGDGYITKEEMLKIVQAIYQMTGSKALPEDEETPEERVDKIFSKMDKNKDG--KLTLEEFIEGC 173 (193)
T ss_pred HHhhhhheeecCCCCceEcHHHHHHHHHHHHHHcccccCCcccccHHHHHHHHHHHcCCCCCC--cccHHHHHHHh
Confidence 88889999999 999999999999887532 2345689999999999 45999999764
No 24
>KOG4223|consensus
Probab=99.06 E-value=7.3e-10 Score=114.64 Aligned_cols=158 Identities=19% Similarity=0.244 Sum_probs=125.2
Q ss_pred hhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhcc
Q psy14118 538 EKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGN 616 (766)
Q Consensus 538 ~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (766)
++..+++..++.++| +++|.|+..||+........+
T Consensus 73 ee~~~rl~~l~~~iD~~~Dgfv~~~El~~wi~~s~k~------------------------------------------- 109 (325)
T KOG4223|consen 73 EESQERLGKLVPKIDSDSDGFVTESELKAWIMQSQKK------------------------------------------- 109 (325)
T ss_pred chhHHHHHHHHhhhcCCCCCceeHHHHHHHHHHHHHH-------------------------------------------
Confidence 447788999999998 899999999999998776321
Q ss_pred ccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHH--------------------HHHHHHHh
Q psy14118 617 ACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKD--------------------IRNWKSVF 676 (766)
Q Consensus 617 ~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~--------------------~~~l~~~F 676 (766)
...+++..-+..+|.|.+|.|+|+|++..+.. +...++-|
T Consensus 110 --------------------~v~~~~~~~~~~~d~~~Dg~i~~eey~~~~~~~~~~~~~~~d~e~~~~~~km~~rDe~rF 169 (325)
T KOG4223|consen 110 --------------------YVVEEAARRWDEYDKNKDGFITWEEYLPQTYGRVDLPDEFPDEEDNEEYKKMIARDEERF 169 (325)
T ss_pred --------------------HHHHHHHHHHHHhccCccceeeHHHhhhhhhhcccCccccccchhcHHHHHHHHHHHHHH
Confidence 12356677788999999999999999886652 13468889
Q ss_pred hhhcCCCCcccCHHHHHHHHHHhC-CCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHH-----------HHHHHHhc
Q psy14118 677 KMYDQENSGYLSPFELRQALTSAG-YHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLK-----------TMIDLFKA 743 (766)
Q Consensus 677 ~~~D~d~~G~Is~~El~~~L~~~g-~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~-----------~~~~~F~~ 743 (766)
+..|.|++|.++.+||..+|..-. ..+.+-.+.+-+...| |+||+|+++||+.=|.... .-...+..
T Consensus 170 k~AD~d~dg~lt~EEF~aFLHPEe~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~F~~~ 249 (325)
T KOG4223|consen 170 KAADQDGDGSLTLEEFTAFLHPEEHPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQFFEF 249 (325)
T ss_pred hhcccCCCCcccHHHHHhccChhhcchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccHHHHHHH
Confidence 999999999999999999998653 3466777888899999 9999999999998776432 22346677
Q ss_pred cCCCCCceEEeCHHHHH
Q psy14118 744 RDPSSTNKATFTLEEWV 760 (766)
Q Consensus 744 ~D~d~~G~I~lt~~ef~ 760 (766)
+|+|++| .|+.+|-.
T Consensus 250 ~DknkDG--~L~~dEl~ 264 (325)
T KOG4223|consen 250 RDKNKDG--KLDGDELL 264 (325)
T ss_pred hhcCCCC--ccCHHHHh
Confidence 8999999 44766544
No 25
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.98 E-value=1.7e-09 Score=93.99 Aligned_cols=69 Identities=22% Similarity=0.242 Sum_probs=63.8
Q ss_pred HHHHHHHHHhhhhcC-CCCcccCHHHHHHHHHH-hCCCCCH-HHHHHHHHHcc-CCCCcccHHHHHHHHHHHH
Q psy14118 667 KDIRNWKSVFKMYDQ-ENSGYLSPFELRQALTS-AGYHLNN-HILNILAHRYS-GRDARISFDDFMMCAVRLK 735 (766)
Q Consensus 667 ~~~~~l~~~F~~~D~-d~~G~Is~~El~~~L~~-~g~~ls~-~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~ 735 (766)
..+..++.+|+.||+ +++|+|+..||+.+|.. +|..+++ ++++.|++.+| |+||+|+|+||+.++.++.
T Consensus 5 ~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~elg~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l~ 77 (89)
T cd05022 5 KAIETLVSNFHKASVKGGKESLTASEFQELLTQQLPHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGELA 77 (89)
T ss_pred HHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHhhhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHH
Confidence 456789999999999 99999999999999999 8887888 99999999999 9999999999999998774
No 26
>KOG0028|consensus
Probab=98.98 E-value=1e-08 Score=95.64 Aligned_cols=123 Identities=17% Similarity=0.290 Sum_probs=106.6
Q ss_pred HHHHHHHHHhhcCCCCccccHHHHHHHHHHH------HHHHHHhhhhcCCCCcccCHHHHHHHHHH-hCCCCCHHHHHHH
Q psy14118 639 KDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI------RNWKSVFKMYDQENSGYLSPFELRQALTS-AGYHLNNHILNIL 711 (766)
Q Consensus 639 ~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~~L~~-~g~~ls~~~~~~l 711 (766)
.++++..|..+|.+++|.|+++|+...+..+ +++..+..-+|++++|.|+.++|+..+.. +|..-+.+++..+
T Consensus 32 ~q~i~e~f~lfd~~~~g~iD~~EL~vAmralGFE~~k~ei~kll~d~dk~~~g~i~fe~f~~~mt~k~~e~dt~eEi~~a 111 (172)
T KOG0028|consen 32 KQEIKEAFELFDPDMAGKIDVEELKVAMRALGFEPKKEEILKLLADVDKEGSGKITFEDFRRVMTVKLGERDTKEEIKKA 111 (172)
T ss_pred HhhHHHHHHhhccCCCCcccHHHHHHHHHHcCCCcchHHHHHHHHhhhhccCceechHHHHHHHHHHHhccCcHHHHHHH
Confidence 4678899999999999999999997776654 78899999999999999999999998764 5766799999999
Q ss_pred HHHcc-CCCCcccHHHHHHHHHHHH------HHHHHHhccCCCCCceEEeCHHHHHHHH
Q psy14118 712 AHRYS-GRDARISFDDFMMCAVRLK------TMIDLFKARDPSSTNKATFTLEEWVENT 763 (766)
Q Consensus 712 ~~~~d-d~dG~Is~~EF~~~l~~l~------~~~~~F~~~D~d~~G~I~lt~~ef~~~~ 763 (766)
|+.+| |++|+||+.+|..++..|. .+.+.....|.|++| .++.+||+.+.
T Consensus 112 frl~D~D~~Gkis~~~lkrvakeLgenltD~El~eMIeEAd~d~dg--evneeEF~~im 168 (172)
T KOG0028|consen 112 FRLFDDDKTGKISQRNLKRVAKELGENLTDEELMEMIEEADRDGDG--EVNEEEFIRIM 168 (172)
T ss_pred HHcccccCCCCcCHHHHHHHHHHhCccccHHHHHHHHHHhcccccc--cccHHHHHHHH
Confidence 99999 9999999999999998763 455556788999999 66999998653
No 27
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.84 E-value=6.4e-09 Score=85.32 Aligned_cols=61 Identities=33% Similarity=0.630 Sum_probs=53.1
Q ss_pred HHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHH----HHHHHHHcc-CCCCcccHHHHHHHH
Q psy14118 671 NWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHI----LNILAHRYS-GRDARISFDDFMMCA 731 (766)
Q Consensus 671 ~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~----~~~l~~~~d-d~dG~Is~~EF~~~l 731 (766)
.++++|+.+|+|++|+|+.+||+.+++.++...+.+. ++.+++.+| |+||.|+|+||+.+|
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDMSDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHSTHHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccccHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 4789999999999999999999999999987665544 455599999 999999999999875
No 28
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.83 E-value=2.6e-08 Score=86.56 Aligned_cols=70 Identities=17% Similarity=0.278 Sum_probs=63.3
Q ss_pred HHHHHHHHHHhhhhc-CCCCc-ccCHHHHHHHHHH-----hCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHH
Q psy14118 666 WKDIRNWKSVFKMYD-QENSG-YLSPFELRQALTS-----AGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLK 735 (766)
Q Consensus 666 ~~~~~~l~~~F~~~D-~d~~G-~Is~~El~~~L~~-----~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~ 735 (766)
-..+..++.+|+.|| +|++| +|+..||+.+|+. +|...++++++.+++.+| |+||+|+|+||+.++..+.
T Consensus 4 e~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~~ 81 (88)
T cd05027 4 EKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSHFLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMVT 81 (88)
T ss_pred HHHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHHHhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHH
Confidence 345678999999998 89999 6999999999999 898899999999999999 9999999999999886553
No 29
>PLN02964 phosphatidylserine decarboxylase
Probab=98.75 E-value=7.3e-08 Score=111.40 Aligned_cols=137 Identities=23% Similarity=0.287 Sum_probs=102.4
Q ss_pred eeEEeecCCCCcccCccccccCcccCccCCCCCCCCcchhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhcccccc
Q psy14118 500 ILRVFSEHKNNMEENDEEVGMGEIDNRIQIPDEPQPEKEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTT 578 (766)
Q Consensus 500 ~LrV~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~ 578 (766)
.++|+......-..+.+-.- ++ + .--..++.+.+++.|+.+| +++|.| |..++..++.
T Consensus 112 ~~~~~~~~~~s~n~lv~~~e---~~--~------t~f~~kqi~elkeaF~lfD~dgdG~i----Lg~ilrslG~------ 170 (644)
T PLN02964 112 RISVFETNRLSKNTLVGYCE---LD--L------FDFVTQEPESACESFDLLDPSSSNKV----VGSIFVSCSI------ 170 (644)
T ss_pred EEEEEecCCCCHHHhhhhee---ec--H------hhccHHHHHHHHHHHHHHCCCCCCcC----HHHHHHHhCC------
Confidence 66777766665444332111 10 0 1124667789999999999 899987 7777766521
Q ss_pred ccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccCCCCccccccccccCCCCCCHHH---HHHHHHhhcCCCCc
Q psy14118 579 TEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACRDTPLGAALETKTTTEGGFSKDV---CRSMVAMLDVDRSG 655 (766)
Q Consensus 579 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~s~~~---i~~l~~~~D~d~~G 655 (766)
..+++++ ++.+|+.+|.|++|
T Consensus 171 --------------------------------------------------------~~pte~e~~fi~~mf~~~D~DgdG 194 (644)
T PLN02964 171 --------------------------------------------------------EDPVETERSFARRILAIVDYDEDG 194 (644)
T ss_pred --------------------------------------------------------CCCCHHHHHHHHHHHHHhCCCCCC
Confidence 2355555 89999999999999
Q ss_pred cccHHHHHHHHHHH------HHHHHHhhhhcCCCCcccCHHHHHHHHHH-------------hCCCCCH-HHHHHHHH
Q psy14118 656 KLGFEEFQQLWKDI------RNWKSVFKMYDQENSGYLSPFELRQALTS-------------AGYHLNN-HILNILAH 713 (766)
Q Consensus 656 ~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~~L~~-------------~g~~ls~-~~~~~l~~ 713 (766)
.|+|+||+.++..+ ++++.+|+.||+|++|+|+.+||+.+|.. .|..++. +++..|++
T Consensus 195 ~IdfdEFl~lL~~lg~~~seEEL~eaFk~fDkDgdG~Is~dEL~~vL~~~~~~~~~~~~cp~cg~~l~~~~~~~~iiH 272 (644)
T PLN02964 195 QLSFSEFSDLIKAFGNLVAANKKEELFKAADLNGDGVVTIDELAALLALQQEQEPIINNCPVCGEALGVSDKLNAMIH 272 (644)
T ss_pred eEcHHHHHHHHHHhccCCCHHHHHHHHHHhCCCCCCcCCHHHHHHHHHhcccCcchhhhchhhcCcccchhhHHHHHH
Confidence 99999999998865 57999999999999999999999999998 5655665 56666664
No 30
>KOG4223|consensus
Probab=98.73 E-value=2.4e-08 Score=103.51 Aligned_cols=128 Identities=16% Similarity=0.187 Sum_probs=105.0
Q ss_pred hHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhcccc
Q psy14118 540 KTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNAC 618 (766)
Q Consensus 540 ~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 618 (766)
-..+=+..|+..| |+||.++.+||.++|.--
T Consensus 161 m~~rDe~rFk~AD~d~dg~lt~EEF~aFLHPE------------------------------------------------ 192 (325)
T KOG4223|consen 161 MIARDEERFKAADQDGDGSLTLEEFTAFLHPE------------------------------------------------ 192 (325)
T ss_pred HHHHHHHHHhhcccCCCCcccHHHHHhccChh------------------------------------------------
Confidence 3344467798898 999999999999988432
Q ss_pred CCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-----------HHHHHHhhhhcCCCCccc
Q psy14118 619 RDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-----------RNWKSVFKMYDQENSGYL 687 (766)
Q Consensus 619 ~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-----------~~l~~~F~~~D~d~~G~I 687 (766)
. ...+..-.|+.-+..+|+|+||+|+++||+.=+-.. .+-.+.|..+|+|++|+|
T Consensus 193 ------------e--~p~M~~iVi~Etl~d~Dkn~DG~I~~eEfigd~~~~~~~~~epeWv~~Ere~F~~~~DknkDG~L 258 (325)
T KOG4223|consen 193 ------------E--HPHMKDIVIAETLEDIDKNGDGKISLEEFIGDLYSHEGNEEEPEWVLTEREQFFEFRDKNKDGKL 258 (325)
T ss_pred ------------h--cchHHHHHHHHHHhhcccCCCCceeHHHHHhHHhhccCCCCCcccccccHHHHHHHhhcCCCCcc
Confidence 1 234555567888999999999999999999866543 234577888999999999
Q ss_pred CHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHH
Q psy14118 688 SPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMM 729 (766)
Q Consensus 688 s~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~ 729 (766)
+.+|++..+..-+......++..|+...| |+||++|++|.+.
T Consensus 259 ~~dEl~~WI~P~~~d~A~~EA~hL~~eaD~dkD~kLs~eEIl~ 301 (325)
T KOG4223|consen 259 DGDELLDWILPSEQDHAKAEARHLLHEADEDKDGKLSKEEILE 301 (325)
T ss_pred CHHHHhcccCCCCccHHHHHHHHHhhhhccCccccccHHHHhh
Confidence 99999998877777888899999999999 9999999999664
No 31
>KOG0034|consensus
Probab=98.72 E-value=2.6e-07 Score=91.34 Aligned_cols=125 Identities=18% Similarity=0.210 Sum_probs=102.0
Q ss_pred CCHHHHHH---HHHhhcCC-CCccccHHHHHHHHHHH--HHHHHHhhhhcCCCCcc-cCHHHHHHHHHHhCCCCCHH-HH
Q psy14118 637 FSKDVCRS---MVAMLDVD-RSGKLGFEEFQQLWKDI--RNWKSVFKMYDQENSGY-LSPFELRQALTSAGYHLNNH-IL 708 (766)
Q Consensus 637 ~s~~~i~~---l~~~~D~d-~~G~I~~~EF~~~~~~~--~~l~~~F~~~D~d~~G~-Is~~El~~~L~~~g~~ls~~-~~ 708 (766)
++..+|.. .|..+|.+ ++|.|+.+||..+.... --..+++..||.+++|. |+.++|..+|...-..-+.+ .+
T Consensus 27 fs~~EI~~L~~rF~kl~~~~~~g~lt~eef~~i~~~~~Np~~~rI~~~f~~~~~~~~v~F~~Fv~~ls~f~~~~~~~~Kl 106 (187)
T KOG0034|consen 27 FSANEIERLYERFKKLDRNNGDGYLTKEEFLSIPELALNPLADRIIDRFDTDGNGDPVDFEEFVRLLSVFSPKASKREKL 106 (187)
T ss_pred cCHHHHHHHHHHHHHhccccccCccCHHHHHHHHHHhcCcHHHHHHHHHhccCCCCccCHHHHHHHHhhhcCCccHHHHH
Confidence 66666654 56778988 99999999999988543 34689999999999999 99999999998876554544 88
Q ss_pred HHHHHHcc-CCCCcccHHHHHHHHHHH-------------HHHHHHHhccCCCCCceEEeCHHHHHHHH
Q psy14118 709 NILAHRYS-GRDARISFDDFMMCAVRL-------------KTMIDLFKARDPSSTNKATFTLEEWVENT 763 (766)
Q Consensus 709 ~~l~~~~d-d~dG~Is~~EF~~~l~~l-------------~~~~~~F~~~D~d~~G~I~lt~~ef~~~~ 763 (766)
+..++.|| +++|.|+.+|+..++..+ .-+..+|..+|.|+||. |+++||..++
T Consensus 107 ~faF~vYD~~~~G~I~reel~~iv~~~~~~~~~~~~e~~~~i~d~t~~e~D~d~DG~--IsfeEf~~~v 173 (187)
T KOG0034|consen 107 RFAFRVYDLDGDGFISREELKQILRMMVGENDDMSDEQLEDIVDKTFEEADTDGDGK--ISFEEFCKVV 173 (187)
T ss_pred HHHHHHhcCCCCCcCcHHHHHHHHHHHHccCCcchHHHHHHHHHHHHHHhCCCCCCc--CcHHHHHHHH
Confidence 99999999 999999999998877532 12344799999999994 5999999765
No 32
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.70 E-value=9.5e-08 Score=83.06 Aligned_cols=69 Identities=20% Similarity=0.357 Sum_probs=61.9
Q ss_pred HHHHHHHHHhhhhcC-CC-CcccCHHHHHHHHHH---hCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHH
Q psy14118 667 KDIRNWKSVFKMYDQ-EN-SGYLSPFELRQALTS---AGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLK 735 (766)
Q Consensus 667 ~~~~~l~~~F~~~D~-d~-~G~Is~~El~~~L~~---~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~ 735 (766)
..+..+..+|..||. ++ +|+|+.+||+.+|.. +|..+++++++++++.+| |++|+|+|+||+.++.++.
T Consensus 7 ~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l~ 81 (88)
T cd05029 7 QAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELTIGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGALA 81 (88)
T ss_pred HHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHhcCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHH
Confidence 445678899999997 77 899999999999973 699999999999999999 9999999999999987764
No 33
>KOG0038|consensus
Probab=98.68 E-value=8.6e-08 Score=87.60 Aligned_cols=99 Identities=22% Similarity=0.441 Sum_probs=82.8
Q ss_pred HHHHHhhcCCCCccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCcccCHHHHHHHHHHhC-CCCCHHHH----HH
Q psy14118 643 RSMVAMLDVDRSGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYLSPFELRQALTSAG-YHLNNHIL----NI 710 (766)
Q Consensus 643 ~~l~~~~D~d~~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g-~~ls~~~~----~~ 710 (766)
+.+.+.+..|+.|.++|++|+.+++.+ -+..-+|+.||-|++++|...+|...+..+- -.++++++ +.
T Consensus 74 ~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ek 153 (189)
T KOG0038|consen 74 RRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEK 153 (189)
T ss_pred HHHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHH
Confidence 456677888999999999999998875 2457789999999999999999999999874 45787775 45
Q ss_pred HHHHcc-CCCCcccHHHHHHHHHHHHHHHHHH
Q psy14118 711 LAHRYS-GRDARISFDDFMMCAVRLKTMIDLF 741 (766)
Q Consensus 711 l~~~~d-d~dG~Is~~EF~~~l~~l~~~~~~F 741 (766)
++...| |+||+|+|.||..++.+.......|
T Consensus 154 vieEAD~DgDgkl~~~eFe~~i~raPDFlsTF 185 (189)
T KOG0038|consen 154 VIEEADLDGDGKLSFAEFEHVILRAPDFLSTF 185 (189)
T ss_pred HHHHhcCCCCCcccHHHHHHHHHhCcchHhhh
Confidence 666788 9999999999999998877666555
No 34
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.68 E-value=1.5e-07 Score=82.94 Aligned_cols=71 Identities=17% Similarity=0.326 Sum_probs=60.8
Q ss_pred HHHHHHHHHHhhhhc-CCCCc-ccCHHHHHHHHHH-h----CCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHHH
Q psy14118 666 WKDIRNWKSVFKMYD-QENSG-YLSPFELRQALTS-A----GYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLKT 736 (766)
Q Consensus 666 ~~~~~~l~~~F~~~D-~d~~G-~Is~~El~~~L~~-~----g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~~ 736 (766)
-..+..++++|..|| +|++| +|+..||+.+|.. + +...++.+++.+++.+| |+||.|+|+||+.++..+..
T Consensus 6 e~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l~~ 84 (93)
T cd05026 6 EGAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDFLSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAALTV 84 (93)
T ss_pred HHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHhcccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHH
Confidence 345678899999999 88998 5999999999976 2 33457889999999999 99999999999999987753
No 35
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.66 E-value=1.7e-07 Score=82.79 Aligned_cols=71 Identities=15% Similarity=0.300 Sum_probs=62.3
Q ss_pred HHHHHHHHhhhhcC-CC-CcccCHHHHHHHHHH-----hCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHHHHH
Q psy14118 668 DIRNWKSVFKMYDQ-EN-SGYLSPFELRQALTS-----AGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLKTMI 738 (766)
Q Consensus 668 ~~~~l~~~F~~~D~-d~-~G~Is~~El~~~L~~-----~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~~~~ 738 (766)
.+..++.+|..||. |+ +|+|+..||+.+|.. +|..+++++++.+++.+| +++|.|+|+||+.++..+.-..
T Consensus 6 ~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~~~~~ 84 (94)
T cd05031 6 AMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSEFLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGLSIAC 84 (94)
T ss_pred HHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHHHhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHH
Confidence 45678999999997 97 799999999999986 467889999999999999 9999999999999987765433
No 36
>KOG0031|consensus
Probab=98.64 E-value=2.9e-07 Score=85.39 Aligned_cols=86 Identities=22% Similarity=0.386 Sum_probs=75.9
Q ss_pred HHHHHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCCcccHHHHHHHHHH-------HHHHHH
Q psy14118 667 KDIRNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYSGRDARISFDDFMMCAVR-------LKTMID 739 (766)
Q Consensus 667 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~dd~dG~Is~~EF~~~l~~-------l~~~~~ 739 (766)
.++++++++|..+|.|+||.|+.++|+.++.++|...++++++.|++... |-|+|--|+.++-. .+.++.
T Consensus 29 ~QIqEfKEAF~~mDqnrDG~IdkeDL~d~~aSlGk~~~d~elDaM~~Ea~---gPINft~FLTmfGekL~gtdpe~~I~~ 105 (171)
T KOG0031|consen 29 SQIQEFKEAFNLMDQNRDGFIDKEDLRDMLASLGKIASDEELDAMMKEAP---GPINFTVFLTMFGEKLNGTDPEEVILN 105 (171)
T ss_pred HHHHHHHHHHHHHhccCCCcccHHHHHHHHHHcCCCCCHHHHHHHHHhCC---CCeeHHHHHHHHHHHhcCCCHHHHHHH
Confidence 35789999999999999999999999999999999999999999999764 78999999998842 357888
Q ss_pred HHhccCCCCCceEEeC
Q psy14118 740 LFKARDPSSTNKATFT 755 (766)
Q Consensus 740 ~F~~~D~d~~G~I~lt 755 (766)
+|+.+|.+++|.|...
T Consensus 106 AF~~FD~~~~G~I~~d 121 (171)
T KOG0031|consen 106 AFKTFDDEGSGKIDED 121 (171)
T ss_pred HHHhcCccCCCccCHH
Confidence 9999999999976433
No 37
>KOG0037|consensus
Probab=98.63 E-value=1.8e-07 Score=92.08 Aligned_cols=119 Identities=18% Similarity=0.266 Sum_probs=102.1
Q ss_pred CHHHHHHHHHhhcCCCCccccHHHHHHHHHH-------HHHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHH
Q psy14118 638 SKDVCRSMVAMLDVDRSGKLGFEEFQQLWKD-------IRNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNI 710 (766)
Q Consensus 638 s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~-------~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~ 710 (766)
+..++...|..+|.|..|.|+-+|....+.. ++.++.+..+||.+++|+|..+||+.+.+.+ ...+.
T Consensus 55 ~~~~~~~~f~~vD~d~sg~i~~~eLq~aLsn~~~~~Fs~~TcrlmI~mfd~~~~G~i~f~EF~~Lw~~i------~~Wr~ 128 (221)
T KOG0037|consen 55 TFPQLAGWFQSVDRDRSGRILAKELQQALSNGTWSPFSIETCRLMISMFDRDNSGTIGFKEFKALWKYI------NQWRN 128 (221)
T ss_pred ccHHHHHHHHhhCccccccccHHHHHHHhhcCCCCCCCHHHHHHHHHHhcCCCCCccCHHHHHHHHHHH------HHHHH
Confidence 4568889999999999999999999998873 4889999999999999999999999988765 56889
Q ss_pred HHHHcc-CCCCcccHHHHHHHHHHH------HHHHHHHhccCCCCCceEEeCHHHHHHHHh
Q psy14118 711 LAHRYS-GRDARISFDDFMMCAVRL------KTMIDLFKARDPSSTNKATFTLEEWVENTL 764 (766)
Q Consensus 711 l~~~~d-d~dG~Is~~EF~~~l~~l------~~~~~~F~~~D~d~~G~I~lt~~ef~~~~~ 764 (766)
+++.+| |+.|+|+..|+...+..+ +....+++++|..+.| .+.+++|+++++
T Consensus 129 vF~~~D~D~SG~I~~sEL~~Al~~~Gy~Lspq~~~~lv~kyd~~~~g--~i~FD~FI~ccv 187 (221)
T KOG0037|consen 129 VFRTYDRDRSGTIDSSELRQALTQLGYRLSPQFYNLLVRKYDRFGGG--RIDFDDFIQCCV 187 (221)
T ss_pred HHHhcccCCCCcccHHHHHHHHHHcCcCCCHHHHHHHHHHhccccCC--ceeHHHHHHHHH
Confidence 999999 999999999999998754 3344568889988888 559999998765
No 38
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.61 E-value=3e-07 Score=80.86 Aligned_cols=69 Identities=17% Similarity=0.316 Sum_probs=60.3
Q ss_pred HHHHHHHHhhhhc-CCCCc-ccCHHHHHHHHHH-hC----CCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHHH
Q psy14118 668 DIRNWKSVFKMYD-QENSG-YLSPFELRQALTS-AG----YHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLKT 736 (766)
Q Consensus 668 ~~~~l~~~F~~~D-~d~~G-~Is~~El~~~L~~-~g----~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~~ 736 (766)
.++.++++|+.|| ++++| +|+..||+.+|+. +| ..+++++++.+++.+| +++|.|+|+||+.++..+..
T Consensus 7 ~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~~ 83 (92)
T cd05025 7 AMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSDFLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALTV 83 (92)
T ss_pred HHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHHHccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHHH
Confidence 3477999999997 99999 5999999999985 54 3568899999999999 99999999999999887654
No 39
>KOG2643|consensus
Probab=98.60 E-value=4.5e-07 Score=97.14 Aligned_cols=115 Identities=18% Similarity=0.348 Sum_probs=86.1
Q ss_pred HHhhcCCCCccccHHHHHHHHHHH--HHHHHHhhhhcCCCCcccCHHHHHHHHHHh-CCCCCH--HHHHHHHHHccCCCC
Q psy14118 646 VAMLDVDRSGKLGFEEFQQLWKDI--RNWKSVFKMYDQENSGYLSPFELRQALTSA-GYHLNN--HILNILAHRYSGRDA 720 (766)
Q Consensus 646 ~~~~D~d~~G~I~~~EF~~~~~~~--~~l~~~F~~~D~d~~G~Is~~El~~~L~~~-g~~ls~--~~~~~l~~~~dd~dG 720 (766)
.-.|-.+++++++++||+.++..+ +-++.-|..+|+..+|.|+..+|..+|-.. +.+... ..++.+-+++++.+.
T Consensus 292 ~yFFG~rg~~kLs~deF~~F~e~Lq~Eil~lEF~~~~~~~~g~Ise~DFA~~lL~~a~~n~~~k~~~lkrvk~kf~~~~~ 371 (489)
T KOG2643|consen 292 TYFFGKRGNGKLSIDEFLKFQENLQEEILELEFERFDKGDSGAISEVDFAELLLAYAGVNSKKKHKYLKRVKEKFKDDGK 371 (489)
T ss_pred HHhhccCCCccccHHHHHHHHHHHHHHHHHHHHHHhCcccccccCHHHHHHHHHHHcccchHhHHHHHHHHHHhccCCCC
Confidence 345688999999999999999987 457888999999999999999999888664 333222 235556666764356
Q ss_pred cccHHHHHHHHHHHHH----------------------H----------------H-HHHhccCCCCCceEEeCHHHHHH
Q psy14118 721 RISFDDFMMCAVRLKT----------------------M----------------I-DLFKARDPSSTNKATFTLEEWVE 761 (766)
Q Consensus 721 ~Is~~EF~~~l~~l~~----------------------~----------------~-~~F~~~D~d~~G~I~lt~~ef~~ 761 (766)
.||++||..+...+.. + . -+|.-+|.|+|| +|+.+||+.
T Consensus 372 gISl~Ef~~Ff~Fl~~l~dfd~Al~fy~~Ag~~i~~~~f~raa~~vtGveLSdhVvdvvF~IFD~N~Dg--~LS~~EFl~ 449 (489)
T KOG2643|consen 372 GISLQEFKAFFRFLNNLNDFDIALRFYHMAGASIDEKTFQRAAKVVTGVELSDHVVDVVFTIFDENNDG--TLSHKEFLA 449 (489)
T ss_pred CcCHHHHHHHHHHHhhhhHHHHHHHHHHHcCCCCCHHHHHHHHHHhcCcccccceeeeEEEEEccCCCC--cccHHHHHH
Confidence 7999999876643210 0 1 157788999999 779999996
Q ss_pred H
Q psy14118 762 N 762 (766)
Q Consensus 762 ~ 762 (766)
+
T Consensus 450 V 450 (489)
T KOG2643|consen 450 V 450 (489)
T ss_pred H
Confidence 5
No 40
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.54 E-value=4.1e-07 Score=80.63 Aligned_cols=70 Identities=16% Similarity=0.341 Sum_probs=62.4
Q ss_pred HHHHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHHHHHH
Q psy14118 668 DIRNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLKTMID 739 (766)
Q Consensus 668 ~~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~~~~~ 739 (766)
.+..++.+|..+|.|++|.|+.+||+.+|+..| +++++++.+++.+| +++|.|+|+||+.++..+..+..
T Consensus 8 ~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~~--~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 78 (96)
T smart00027 8 DKAKYEQIFRSLDKNQDGTVTGAQAKPILLKSG--LPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLN 78 (96)
T ss_pred HHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHcC--CCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHHc
Confidence 346789999999999999999999999999865 68899999999999 99999999999999887765543
No 41
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.53 E-value=2.9e-07 Score=75.38 Aligned_cols=61 Identities=18% Similarity=0.349 Sum_probs=55.5
Q ss_pred HHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHH
Q psy14118 673 KSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLK 735 (766)
Q Consensus 673 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~ 735 (766)
+.+|+.+|.|++|.|+.+||+.++..+|. ++++++.+++.+| +++|.|+|+||+.++....
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~g~--~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~~ 63 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKSGL--PRSVLAQIWDLADTDKDGKLDKEEFAIAMHLIA 63 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHcCC--CHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHHH
Confidence 67899999999999999999999998874 8889999999999 9999999999999876543
No 42
>PLN02964 phosphatidylserine decarboxylase
Probab=98.53 E-value=4e-07 Score=105.38 Aligned_cols=86 Identities=17% Similarity=0.220 Sum_probs=44.6
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHhC-CCCCHHH---HHHHHHHcc-CCCCcccHHHHHHHHHHH------HHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSAG-YHLNNHI---LNILAHRYS-GRDARISFDDFMMCAVRL------KTMI 738 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g-~~ls~~~---~~~l~~~~d-d~dG~Is~~EF~~~l~~l------~~~~ 738 (766)
++++++|..+|.|++|+| +..+++.+| ...++++ ++.+++.+| |++|.|+|+||+.++..+ +.+.
T Consensus 143 ~elkeaF~lfD~dgdG~i----Lg~ilrslG~~~pte~e~~fi~~mf~~~D~DgdG~IdfdEFl~lL~~lg~~~seEEL~ 218 (644)
T PLN02964 143 ESACESFDLLDPSSSNKV----VGSIFVSCSIEDPVETERSFARRILAIVDYDEDGQLSFSEFSDLIKAFGNLVAANKKE 218 (644)
T ss_pred HHHHHHHHHHCCCCCCcC----HHHHHHHhCCCCCCHHHHHHHHHHHHHhCCCCCCeEcHHHHHHHHHHhccCCCHHHHH
Confidence 455555555555555554 555555555 3444444 455555555 555555555555555432 2344
Q ss_pred HHHhccCCCCCceEEeCHHHHHH
Q psy14118 739 DLFKARDPSSTNKATFTLEEWVE 761 (766)
Q Consensus 739 ~~F~~~D~d~~G~I~lt~~ef~~ 761 (766)
++|+.+|.|++| .|+++|+..
T Consensus 219 eaFk~fDkDgdG--~Is~dEL~~ 239 (644)
T PLN02964 219 ELFKAADLNGDG--VVTIDELAA 239 (644)
T ss_pred HHHHHhCCCCCC--cCCHHHHHH
Confidence 555555555555 235555544
No 43
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.51 E-value=7.3e-07 Score=77.67 Aligned_cols=69 Identities=16% Similarity=0.289 Sum_probs=60.2
Q ss_pred HHHHHHHHHhhh-hcCCCCc-ccCHHHHHHHHHHh-----CCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHH
Q psy14118 667 KDIRNWKSVFKM-YDQENSG-YLSPFELRQALTSA-----GYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLK 735 (766)
Q Consensus 667 ~~~~~l~~~F~~-~D~d~~G-~Is~~El~~~L~~~-----g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~ 735 (766)
..+..+..+|+. +|++++| +|+.+||+.++... +...++.+++.+++.+| |+||.|+|+||+.++..+.
T Consensus 6 ~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l~ 82 (89)
T cd05023 6 RCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASFTKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGLA 82 (89)
T ss_pred HHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHhhcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHHH
Confidence 456788999999 7888976 99999999999875 34567899999999999 9999999999999988764
No 44
>KOG0036|consensus
Probab=98.50 E-value=1.4e-06 Score=92.81 Aligned_cols=118 Identities=17% Similarity=0.287 Sum_probs=102.3
Q ss_pred CHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHH
Q psy14118 638 SKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNI 710 (766)
Q Consensus 638 s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~ 710 (766)
-+..++.+|+.+|.+++|.|+..+....+..+ +-.+.+|...|.|.+|.++.+||++.+.. .+.++-.
T Consensus 12 r~~r~~~lf~~lD~~~~g~~d~~~l~k~~~~l~~~~~~~~~~~~l~~~~d~~~dg~vDy~eF~~Y~~~-----~E~~l~~ 86 (463)
T KOG0036|consen 12 RDIRIRCLFKELDSKNDGQVDLDQLEKGLEKLDHPKPNYEAAKMLFSAMDANRDGRVDYSEFKRYLDN-----KELELYR 86 (463)
T ss_pred HHHHHHHHHHHhccCCCCceeHHHHHHHHHhcCCCCCchHHHHHHHHhcccCcCCcccHHHHHHHHHH-----hHHHHHH
Confidence 35578899999999999999999999887765 56789999999999999999999999876 5677889
Q ss_pred HHHHcc-CCCCcccHHHHHHHHHH------HHHHHHHHhccCCCCCceEEeCHHHHHHH
Q psy14118 711 LAHRYS-GRDARISFDDFMMCAVR------LKTMIDLFKARDPSSTNKATFTLEEWVEN 762 (766)
Q Consensus 711 l~~~~d-d~dG~Is~~EF~~~l~~------l~~~~~~F~~~D~d~~G~I~lt~~ef~~~ 762 (766)
+|..+| +.||.|+-+|....+.. .+.+.++|+..|+++++ +|+++||-..
T Consensus 87 ~F~~iD~~hdG~i~~~Ei~~~l~~~gi~l~de~~~k~~e~~d~~g~~--~I~~~e~rd~ 143 (463)
T KOG0036|consen 87 IFQSIDLEHDGKIDPNEIWRYLKDLGIQLSDEKAAKFFEHMDKDGKA--TIDLEEWRDH 143 (463)
T ss_pred HHhhhccccCCccCHHHHHHHHHHhCCccCHHHHHHHHHHhccCCCe--eeccHHHHhh
Confidence 999999 99999999998888764 35677789999999999 5588888743
No 45
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=98.48 E-value=7.1e-07 Score=77.72 Aligned_cols=69 Identities=20% Similarity=0.369 Sum_probs=60.1
Q ss_pred HHHHHHHHHhhhhcC--CCCcccCHHHHHHHHHH-hCCC----CCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHH
Q psy14118 667 KDIRNWKSVFKMYDQ--ENSGYLSPFELRQALTS-AGYH----LNNHILNILAHRYS-GRDARISFDDFMMCAVRLK 735 (766)
Q Consensus 667 ~~~~~l~~~F~~~D~--d~~G~Is~~El~~~L~~-~g~~----ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~ 735 (766)
..++.++.+|..||+ |++|.|+.+||..+++. +|.. .+.++++.++..+| +++|.|+|++|+.++..+.
T Consensus 5 ~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~~ 81 (88)
T cd00213 5 KAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNFLKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKLA 81 (88)
T ss_pred HHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhhccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHHH
Confidence 346778999999999 89999999999999986 5543 45899999999999 9999999999999887653
No 46
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.46 E-value=4e-07 Score=71.47 Aligned_cols=51 Identities=29% Similarity=0.501 Sum_probs=48.1
Q ss_pred CCcccCHHHHHHHHHHhCCC-CCHHHHHHHHHHcc-CCCCcccHHHHHHHHHH
Q psy14118 683 NSGYLSPFELRQALTSAGYH-LNNHILNILAHRYS-GRDARISFDDFMMCAVR 733 (766)
Q Consensus 683 ~~G~Is~~El~~~L~~~g~~-ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~ 733 (766)
++|.|+.+||+.+|..+|.. ++++++..++..+| +++|.|+|+||+.++.+
T Consensus 1 ~~G~i~~~~~~~~l~~~g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 1 KDGKITREEFRRALSKLGIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp SSSEEEHHHHHHHHHHTTSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CcCEECHHHHHHHHHHhCCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 47999999999999888999 99999999999999 99999999999998864
No 47
>cd05022 S-100A13 S-100A13: S-100A13 domain found in proteins similar to S100A13. S100A13 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A13 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100A13 is involved in the cellular export of interleukin-1 (IL-1) and of fibroblast growth factor-1 (FGF-1), which plays an important role in angiogenesis and tissue regeneration. Export is based on the CuII-dependent formation of multiprotein complexes containing the S100A13 protein. Assembly of these complexes occurs near the inner surface of the plasma membrane. Binding of two Ca(II) ions per monomer triggers key conformational changes leading to the creation of two identical and symmetrical Cu(II)-binding sites on the surface of the protein, close to the interface between the two monomers. These Cu
Probab=98.44 E-value=7.4e-07 Score=77.46 Aligned_cols=70 Identities=24% Similarity=0.347 Sum_probs=59.5
Q ss_pred hhhHHHHHHHHHHHcC--CCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhc
Q psy14118 538 EKKTEAIRQFFQKLAG--DDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICG 615 (766)
Q Consensus 538 ~~~~~~~r~~F~~~d~--~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (766)
+.....++.+|+.+|. ++|.|+..||+.+|+.-+
T Consensus 4 E~ai~~l~~~F~~fd~~~~~g~i~~~ELk~ll~~el-------------------------------------------- 39 (89)
T cd05022 4 EKAIETLVSNFHKASVKGGKESLTASEFQELLTQQL-------------------------------------------- 39 (89)
T ss_pred HHHHHHHHHHHHHHhCCCCCCeECHHHHHHHHHHHh--------------------------------------------
Confidence 5567889999999984 899999999999998821
Q ss_pred cccCCCCccccccccccCCCCCCH-HHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 616 NACRDTPLGAALETKTTTEGGFSK-DVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 616 ~~~~~~~l~~~~~~~~~~~~~~s~-~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
+..++. ++++.||+.+|.|+||.|+|+||..++..+
T Consensus 40 ------------------g~~ls~~~~v~~mi~~~D~d~DG~I~F~EF~~l~~~l 76 (89)
T cd05022 40 ------------------PHLLKDVEGLEEKMKNLDVNQDSKLSFEEFWELIGEL 76 (89)
T ss_pred ------------------hhhccCHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHH
Confidence 122444 889999999999999999999999998876
No 48
>PF13499 EF-hand_7: EF-hand domain pair; PDB: 1TCF_A 2TN4_A 1TN4_A 1A2X_A 2CT9_B 2OTG_B 2OS8_B 1SNL_A 3O4Y_A 3J04_E ....
Probab=98.39 E-value=8e-07 Score=72.77 Aligned_cols=65 Identities=22% Similarity=0.368 Sum_probs=52.0
Q ss_pred HHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccCCC
Q psy14118 543 AIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACRDT 621 (766)
Q Consensus 543 ~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (766)
+++.+|+.+| +++|.|+.+||..+++.++...
T Consensus 1 ~l~~~F~~~D~d~~G~i~~~el~~~~~~~~~~~----------------------------------------------- 33 (66)
T PF13499_consen 1 RLKEAFKKFDKDGDGYISKEELRRALKHLGRDM----------------------------------------------- 33 (66)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHHTTSHS-----------------------------------------------
T ss_pred CHHHHHHHHcCCccCCCCHHHHHHHHHHhcccc-----------------------------------------------
Confidence 4789999999 9999999999999998873211
Q ss_pred CccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHH
Q psy14118 622 PLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLW 666 (766)
Q Consensus 622 ~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~ 666 (766)
......+.++.+|+.+|.|++|.|+|+||+.++
T Consensus 34 ------------~~~~~~~~~~~~~~~~D~d~dG~i~~~Ef~~~~ 66 (66)
T PF13499_consen 34 ------------SDEESDEMIDQIFREFDTDGDGRISFDEFLNFM 66 (66)
T ss_dssp ------------THHHHHHHHHHHHHHHTTTSSSSEEHHHHHHHH
T ss_pred ------------cHHHHHHHHHHHHHHhCCCCcCCCcHHHHhccC
Confidence 012234567777999999999999999998864
No 49
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=98.31 E-value=2.2e-06 Score=68.00 Aligned_cols=60 Identities=25% Similarity=0.517 Sum_probs=56.2
Q ss_pred HHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHH
Q psy14118 672 WKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCA 731 (766)
Q Consensus 672 l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l 731 (766)
++.+|+.+|.+++|.|+.+|+..++..++...+.+.+..+++.++ +++|.|++++|+.++
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSLGEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 578899999999999999999999999999999999999999999 999999999998764
No 50
>KOG0377|consensus
Probab=98.30 E-value=6.9e-06 Score=87.79 Aligned_cols=65 Identities=22% Similarity=0.355 Sum_probs=57.9
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHh----CCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSA----GYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRL 734 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~----g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l 734 (766)
..+..+|+.+|.|++|.|+.+||+.+.+-+ ...++++++.++.+.+| |+||.|++.||++.+.-.
T Consensus 547 s~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~IDlNEfLeAFrlv 616 (631)
T KOG0377|consen 547 SSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKIDLNEFLEAFRLV 616 (631)
T ss_pred hhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcccHHHHHHHHhhh
Confidence 568999999999999999999999988765 45789999999999999 999999999999876533
No 51
>KOG2643|consensus
Probab=98.28 E-value=2.4e-06 Score=91.70 Aligned_cols=114 Identities=19% Similarity=0.351 Sum_probs=86.3
Q ss_pred hcCCCCccccHHHHHHHHHHH----HHHHHHhhhhcCCCCcccCHHHHHHHHHHh------CC----------CCCHHHH
Q psy14118 649 LDVDRSGKLGFEEFQQLWKDI----RNWKSVFKMYDQENSGYLSPFELRQALTSA------GY----------HLNNHIL 708 (766)
Q Consensus 649 ~D~d~~G~I~~~EF~~~~~~~----~~l~~~F~~~D~d~~G~Is~~El~~~L~~~------g~----------~ls~~~~ 708 (766)
++.+.+|-|+|.||+-++..+ ..++-+|+.||.|+||-|+.+||..+.+-+ |. .......
T Consensus 208 ~~lg~~GLIsfSdYiFLlTlLS~p~~~F~IAFKMFD~dgnG~IdkeEF~~v~~li~sQ~~~g~~hrd~~tt~~s~~~~~n 287 (489)
T KOG2643|consen 208 YKLGESGLISFSDYIFLLTLLSIPERNFRIAFKMFDLDGNGEIDKEEFETVQQLIRSQTSVGVRHRDHFTTGNSFKVEVN 287 (489)
T ss_pred EEcCCCCeeeHHHHHHHHHHHccCcccceeeeeeeecCCCCcccHHHHHHHHHHHHhccccceecccCccccceehhhhh
Confidence 466788999999999888876 578999999999999999999998776432 21 1111222
Q ss_pred HHHHHH-cc-CCCCcccHHHHHHHHHHHH--HHHHHHhccCCCCCceEEeCHHHHHHHHh
Q psy14118 709 NILAHR-YS-GRDARISFDDFMMCAVRLK--TMIDLFKARDPSSTNKATFTLEEWVENTL 764 (766)
Q Consensus 709 ~~l~~~-~d-d~dG~Is~~EF~~~l~~l~--~~~~~F~~~D~d~~G~I~lt~~ef~~~~~ 764 (766)
..+... +. +++++++++||++++..|+ -+.--|..+|+..+|.| +..+|..+++
T Consensus 288 saL~~yFFG~rg~~kLs~deF~~F~e~Lq~Eil~lEF~~~~~~~~g~I--se~DFA~~lL 345 (489)
T KOG2643|consen 288 SALLTYFFGKRGNGKLSIDEFLKFQENLQEEILELEFERFDKGDSGAI--SEVDFAELLL 345 (489)
T ss_pred hhHHHHhhccCCCccccHHHHHHHHHHHHHHHHHHHHHHhCccccccc--CHHHHHHHHH
Confidence 233333 45 8999999999999998775 34446999999999954 8888886654
No 52
>cd05027 S-100B S-100B: S-100B domain found in proteins similar to S100B. S100B is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100B group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100B is most abundant in glial cells of the central nervous system, predominately in astrocytes. S100B is involved in signal transduction via the inhibition of protein phoshorylation, regulation of enzyme activity and by affecting the calcium homeostasis. Upon calcium binding the S100B homodimer changes conformation to expose a hydrophobic cleft, which represents the interaction site of S100B with its more than 20 known target proteins. These target proteins include several cellular architecture proteins such as tubulin and GFAP; S100B can inhibit polymerization of these oligomeric molecules. Furthermore, S100B i
Probab=98.28 E-value=4.3e-06 Score=72.72 Aligned_cols=74 Identities=23% Similarity=0.364 Sum_probs=61.0
Q ss_pred hhhHHHHHHHHHHHc--CCCc-ccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 538 EKKTEAIRQFFQKLA--GDDM-EVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 538 ~~~~~~~r~~F~~~d--~~~g-~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
+.....++.+|+.+| +++| .|+..||+.+|+.-+..
T Consensus 4 e~~~~~l~~aF~~fD~~dgdG~~I~~~eL~~ll~~~~~~----------------------------------------- 42 (88)
T cd05027 4 EKAMVALIDVFHQYSGREGDKHKLKKSELKELINNELSH----------------------------------------- 42 (88)
T ss_pred HHHHHHHHHHHHHhcccCCCcCEECHHHHHHHHHHHhHH-----------------------------------------
Confidence 456778999999996 6899 69999999999873211
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
..+...+++++..+++.+|.|++|.|+|+||+.++..+
T Consensus 43 -----------------~lg~~~~~~~v~~~i~~~D~n~dG~v~f~eF~~li~~~ 80 (88)
T cd05027 43 -----------------FLEEIKEQEVVDKVMETLDSDGDGECDFQEFMAFVAMV 80 (88)
T ss_pred -----------------HhcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 01345688999999999999999999999999988765
No 53
>cd05026 S-100Z S-100Z: S-100Z domain found in proteins similar to S100Z. S100Z is a member of the S100 domain family within the EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100Z group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately.S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control. S100Z is normally expressed in various tissues, with its highest level of expression being in spleen and leukocytes. The function of S100Z remains unclear. Preliminary structural data suggests that S100Z is homodimer, however a heterodimer with S100P has been reported. S100Z is capable of binding calcium ions. When calcium binds to S110Z, the protein experiences a conformational change, which exposes hydrophobic surfac
Probab=98.27 E-value=4.2e-06 Score=73.69 Aligned_cols=75 Identities=17% Similarity=0.289 Sum_probs=60.5
Q ss_pred chhhHHHHHHHHHHHc--CCCc-ccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHH
Q psy14118 537 KEKKTEAIRQFFQKLA--GDDM-EVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALI 613 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d--~~~g-~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (766)
-+.....++.+|+++| +++| .|+..||+.+|...+...
T Consensus 5 le~a~~~~~~~F~~~dd~dgdg~~Is~~EL~~ll~~~~~~~--------------------------------------- 45 (93)
T cd05026 5 LEGAMDTLIRIFHNYSGKEGDRYKLSKGELKELLQRELTDF--------------------------------------- 45 (93)
T ss_pred HHHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHhHHh---------------------------------------
Confidence 4667788899999998 5777 599999999997742110
Q ss_pred hccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 614 CGNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 614 ~~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
.....+..++.+|++.+|.|++|.|+|+||+.++..+
T Consensus 46 -------------------~~~~~~~~~v~~i~~elD~n~dG~Idf~EF~~l~~~l 82 (93)
T cd05026 46 -------------------LSSQKDPMLVDKIMNDLDSNKDNEVDFNEFVVLVAAL 82 (93)
T ss_pred -------------------cccccCHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHH
Confidence 0123467899999999999999999999999998876
No 54
>smart00027 EH Eps15 homology domain. Pair of EF hand motifs that recognise proteins containing Asn-Pro-Phe (NPF) sequences.
Probab=98.25 E-value=3.9e-06 Score=74.40 Aligned_cols=73 Identities=22% Similarity=0.280 Sum_probs=63.5
Q ss_pred chhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhc
Q psy14118 537 KEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICG 615 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (766)
+.++...++.+|..+| +++|.|+..||+.+|...
T Consensus 5 s~~~~~~l~~~F~~~D~d~~G~Is~~el~~~l~~~--------------------------------------------- 39 (96)
T smart00027 5 SPEDKAKYEQIFRSLDKNQDGTVTGAQAKPILLKS--------------------------------------------- 39 (96)
T ss_pred CHHHHHHHHHHHHHhCCCCCCeEeHHHHHHHHHHc---------------------------------------------
Confidence 4678889999999999 899999999999999653
Q ss_pred cccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHHHHHHH
Q psy14118 616 NACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDIRNWKS 674 (766)
Q Consensus 616 ~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~~~l~~ 674 (766)
+++.++++.|++.+|.+++|.|+|+||+.++..+..+..
T Consensus 40 --------------------~~~~~ev~~i~~~~d~~~~g~I~~~eF~~~~~~~~~~~~ 78 (96)
T smart00027 40 --------------------GLPQTLLAKIWNLADIDNDGELDKDEFALAMHLIYRKLN 78 (96)
T ss_pred --------------------CCCHHHHHHHHHHhcCCCCCCcCHHHHHHHHHHHHHHHc
Confidence 256789999999999999999999999999987765544
No 55
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=98.18 E-value=3.8e-06 Score=76.68 Aligned_cols=62 Identities=23% Similarity=0.334 Sum_probs=53.1
Q ss_pred HHHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHH
Q psy14118 669 IRNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRL 734 (766)
Q Consensus 669 ~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l 734 (766)
...+..+|..+|.|+||+|+.+||..+. ....+..+..++..+| |+||.||++||..++.+.
T Consensus 47 ~~~l~w~F~~lD~d~DG~Ls~~EL~~~~----l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl~~~ 109 (116)
T cd00252 47 KDPVGWMFNQLDGNYDGKLSHHELAPIR----LDPNEHCIKPFFESCDLDKDGSISLDEWCYCFIKE 109 (116)
T ss_pred HHHHHHHHHHHCCCCCCcCCHHHHHHHH----ccchHHHHHHHHHHHCCCCCCCCCHHHHHHHHhCh
Confidence 4678899999999999999999999876 3345677889999999 999999999999998543
No 56
>KOG4251|consensus
Probab=98.18 E-value=8.7e-06 Score=80.82 Aligned_cols=201 Identities=15% Similarity=0.175 Sum_probs=130.0
Q ss_pred eecCCceEEEcCCCCCCCccCceeEEeecCCCCcccCccccccCcccCccCCCCCCCCcchhhHHHHHHHHHHHc-CCCc
Q psy14118 478 KLPPGVYCIVPSTFEPNEEGEFILRVFSEHKNNMEENDEEVGMGEIDNRIQIPDEPQPEKEKKTEAIRQFFQKLA-GDDM 556 (766)
Q Consensus 478 ~L~pG~Y~IVPsT~~p~~~g~F~LrV~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~F~~~d-~~~g 556 (766)
.|||...-.||--.+-.-...|.-.||-.+... + .+ ...+.....+.+..+|.+.| +.|+
T Consensus 56 iLppDHlngvkLEmDGhLNrgFhQEvflgkdLg----------g-fD--------edaeprrsrrklmviFsKvDVNtDr 116 (362)
T KOG4251|consen 56 ILPPDHLNGVKLEMDGHLNRGFHQEVFLGKDLG----------G-FD--------EDAEPRRSRRKLMVIFSKVDVNTDR 116 (362)
T ss_pred cCCcccccccccccccccchhhhhhheeccCCC----------C-cc--------cccchhHHHHHHHHHHhhcccCccc
Confidence 388888888887777666777777776654432 0 00 12234556788899999999 9999
Q ss_pred ccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccCCCCccccccccccCCCC
Q psy14118 557 EVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACRDTPLGAALETKTTTEGG 636 (766)
Q Consensus 557 ~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 636 (766)
.|++.|+++.+......+- .
T Consensus 117 kisAkEmqrwImektaEHf------------------------------------------------------------q 136 (362)
T KOG4251|consen 117 KISAKEMQRWIMEKTAEHF------------------------------------------------------------Q 136 (362)
T ss_pred cccHHHHHHHHHHHHHHHH------------------------------------------------------------H
Confidence 9999999998876522111 1
Q ss_pred CCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH--------------------HHHHHHhhhhcCCCCcccCH-------
Q psy14118 637 FSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI--------------------RNWKSVFKMYDQENSGYLSP------- 689 (766)
Q Consensus 637 ~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~--------------------~~l~~~F~~~D~d~~G~Is~------- 689 (766)
-..++.+-.|+..|+|++|.|+++||..-+... ++-.+.|..-+++..|..+.
T Consensus 137 eameeSkthFraVDpdgDGhvsWdEykvkFlaskghsekevadairlneelkVDeEtqevlenlkdRwyqaDsppadlll 216 (362)
T KOG4251|consen 137 EAMEESKTHFRAVDPDGDGHVSWDEYKVKFLASKGHSEKEVADAIRLNEELKVDEETQEVLENLKDRWYQADSPPADLLL 216 (362)
T ss_pred HHHhhhhhheeeeCCCCCCceehhhhhhHHHhhcCcchHHHHHHhhccCcccccHHHHHHHHhhhhhhccccCchhhhhh
Confidence 122444567888999999999999998755432 22345565566666666554
Q ss_pred --HHHHHHHHHh-CCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHH--------------HHHHHHHHh-ccCCCCCc
Q psy14118 690 --FELRQALTSA-GYHLNNHILNILAHRYS-GRDARISFDDFMMCAVR--------------LKTMIDLFK-ARDPSSTN 750 (766)
Q Consensus 690 --~El~~~L~~~-g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~--------------l~~~~~~F~-~~D~d~~G 750 (766)
+|+..+|..- ...+-...++.++..+| |+|..++..||++.... .+.-.+.|. .+|.+.+|
T Consensus 217 teeEflsFLHPEhSrgmLrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDG 296 (362)
T KOG4251|consen 217 TEEEFLSFLHPEHSRGMLRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDG 296 (362)
T ss_pred hHHHHHHHcChHhhhhhHHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCcc
Confidence 7776666532 12233455677777788 88888888888875421 111222343 46888888
Q ss_pred eEEeCHHHH
Q psy14118 751 KATFTLEEW 759 (766)
Q Consensus 751 ~I~lt~~ef 759 (766)
.+ |++|.
T Consensus 297 iv--TaeEL 303 (362)
T KOG4251|consen 297 IV--TAEEL 303 (362)
T ss_pred ce--eHHHH
Confidence 55 55554
No 57
>cd05029 S-100A6 S-100A6: S-100A6 domain found in proteins similar to S100A6. S100A6 is a member of the S100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A6 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100A6 is normally expressed in the G1 phase of the cell cycle in neuronal cells. The function of S100A6 remains unclear, but evidence suggests that it is involved in cell cycle regulation and exocytosis. S100A6 may also be involved in tumorigenesis; the protein is overexpressed in several tumors. Ca2+ binding to S100A6 leads to a conformational change in the protein, which exposes a hydrophobic surface for interact
Probab=98.18 E-value=8.3e-06 Score=70.93 Aligned_cols=74 Identities=12% Similarity=0.269 Sum_probs=61.4
Q ss_pred cchhhHHHHHHHHHHHc--CC-CcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHH
Q psy14118 536 EKEKKTEAIRQFFQKLA--GD-DMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLAL 612 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d--~~-~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 612 (766)
+-++....+-.+|.+++ ++ +|.|+..||+.+|++...
T Consensus 4 ~~e~~~~~~i~~F~~y~~~~~~~g~Is~~EL~~~l~~~~~---------------------------------------- 43 (88)
T cd05029 4 PLDQAIGLLVAIFHKYSGREGDKNTLSKKELKELIQKELT---------------------------------------- 43 (88)
T ss_pred HHHHHHHHHHHHHHHHHccCCCCCEECHHHHHHHHHHHHh----------------------------------------
Confidence 34677788899999998 34 679999999999975310
Q ss_pred HhccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 613 ICGNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 613 ~~~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
.+..++.+++.++++.+|.|++|+|+|+||+.++..+
T Consensus 44 --------------------lg~k~t~~ev~~m~~~~D~d~dG~Idf~EFv~lm~~l 80 (88)
T cd05029 44 --------------------IGSKLQDAEIAKLMEDLDRNKDQEVNFQEYVTFLGAL 80 (88)
T ss_pred --------------------cCCCCCHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHH
Confidence 1355789999999999999999999999999988765
No 58
>KOG0030|consensus
Probab=98.16 E-value=1.3e-05 Score=73.38 Aligned_cols=126 Identities=10% Similarity=0.088 Sum_probs=94.3
Q ss_pred CHHHHHHHHHhhcCCCCccccHHHHHHHHHHH------HHHHHHhhhhcCC--CCcccCHHHHHHHHHHhC---CCCCHH
Q psy14118 638 SKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI------RNWKSVFKMYDQE--NSGYLSPFELRQALTSAG---YHLNNH 706 (766)
Q Consensus 638 s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d--~~G~Is~~El~~~L~~~g---~~ls~~ 706 (766)
...+++++|..||..+||+|++.+--..++.+ .++.+....++++ +--.|++++|.-++..+. ...+-+
T Consensus 9 ~~~e~ke~F~lfD~~gD~ki~~~q~gdvlRalG~nPT~aeV~k~l~~~~~~~~~~~rl~FE~fLpm~q~vaknk~q~t~e 88 (152)
T KOG0030|consen 9 QMEEFKEAFLLFDRTGDGKISGSQVGDVLRALGQNPTNAEVLKVLGQPKRREMNVKRLDFEEFLPMYQQVAKNKDQGTYE 88 (152)
T ss_pred hHHHHHHHHHHHhccCcccccHHHHHHHHHHhcCCCcHHHHHHHHcCcccchhhhhhhhHHHHHHHHHHHHhccccCcHH
Confidence 34788889999998899999998888877776 5677777777776 557788888888887764 344566
Q ss_pred HHHHHHHHcc-CCCCcccHHHHHHHHHHHHH------HHHHHhccCCCCCceEEeCHHHHHHHHhcC
Q psy14118 707 ILNILAHRYS-GRDARISFDDFMMCAVRLKT------MIDLFKARDPSSTNKATFTLEEWVENTLYS 766 (766)
Q Consensus 707 ~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~~------~~~~F~~~D~d~~G~I~lt~~ef~~~~~~~ 766 (766)
+.-+-++.+| +++|.|...|+..+++.+-. +..+.. --.|.+| .|+++.|+..+|++
T Consensus 89 dfvegLrvFDkeg~G~i~~aeLRhvLttlGekl~eeEVe~Lla-g~eD~nG--~i~YE~fVk~i~~g 152 (152)
T KOG0030|consen 89 DFVEGLRVFDKEGNGTIMGAELRHVLTTLGEKLTEEEVEELLA-GQEDSNG--CINYEAFVKHIMSG 152 (152)
T ss_pred HHHHHHHhhcccCCcceeHHHHHHHHHHHHhhccHHHHHHHHc-cccccCC--cCcHHHHHHHHhcC
Confidence 6667778888 88899999999888888742 222222 2356677 66999999998875
No 59
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=98.14 E-value=9e-06 Score=70.78 Aligned_cols=68 Identities=19% Similarity=0.395 Sum_probs=58.3
Q ss_pred HHHHHHHHHhhhhcCC--CCcccCHHHHHHHHH-HhCCCCC----HHHHHHHHHHcc-CCCCcccHHHHHHHHHHH
Q psy14118 667 KDIRNWKSVFKMYDQE--NSGYLSPFELRQALT-SAGYHLN----NHILNILAHRYS-GRDARISFDDFMMCAVRL 734 (766)
Q Consensus 667 ~~~~~l~~~F~~~D~d--~~G~Is~~El~~~L~-~~g~~ls----~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l 734 (766)
..+..+..+|..|+.. ++|+|+.+||+.+|. .+|..++ +++++.+++.+| +++|.|+|+||+.++..+
T Consensus 5 ~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 5 KAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNFLKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred HHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHhhccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 3456788999999966 489999999999997 5565566 899999999999 999999999999988754
No 60
>KOG0041|consensus
Probab=98.13 E-value=8e-06 Score=78.98 Aligned_cols=75 Identities=24% Similarity=0.512 Sum_probs=64.1
Q ss_pred HHHHHHHH-HHHHHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHH
Q psy14118 659 FEEFQQLW-KDIRNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVR 733 (766)
Q Consensus 659 ~~EF~~~~-~~~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~ 733 (766)
|.||..+- ..++.+..+|+.||.|.||+|+..||+.+|..+|..-+.--++.|++..| |.||+|+|-||+-++..
T Consensus 87 yteF~eFsrkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLgapQTHL~lK~mikeVded~dgklSfreflLIfrk 163 (244)
T KOG0041|consen 87 YTEFSEFSRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLGAPQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRK 163 (244)
T ss_pred hhhhhHHHHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhCCchhhHHHHHHHHHhhcccccchhHHHHHHHHHH
Confidence 34444322 23578899999999999999999999999999998888888999999999 99999999999977653
No 61
>KOG0751|consensus
Probab=98.12 E-value=4.6e-05 Score=82.69 Aligned_cols=117 Identities=14% Similarity=0.384 Sum_probs=90.7
Q ss_pred CCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH----HHHHHHhhhhcCCCCcccCHHHHHHHHHHhC------CCCC
Q psy14118 635 GGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI----RNWKSVFKMYDQENSGYLSPFELRQALTSAG------YHLN 704 (766)
Q Consensus 635 ~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~----~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g------~~ls 704 (766)
..+.++.++.+-...|..+||-|+|+||+.+-..+ ...+.+|..||+.++|.++.+++..++.... ++.+
T Consensus 69 ~~~n~~~v~Lla~iaD~tKDglisf~eF~afe~~lC~pDal~~~aFqlFDr~~~~~vs~~~~~~if~~t~l~~~~~f~~d 148 (694)
T KOG0751|consen 69 SNFNDKIVRLLASIADQTKDGLISFQEFRAFESVLCAPDALFEVAFQLFDRLGNGEVSFEDVADIFGQTNLHHHIPFNWD 148 (694)
T ss_pred ccCChHHHHHHHhhhhhcccccccHHHHHHHHhhccCchHHHHHHHHHhcccCCCceehHHHHHHHhccccccCCCccCC
Confidence 44566666666667788999999999999876554 5678999999999999999999999998753 2334
Q ss_pred HHHHHHHHHHcc-CCCCcccHHHHHHHHHH--HHHHHHHHhccCCCCCceEEe
Q psy14118 705 NHILNILAHRYS-GRDARISFDDFMMCAVR--LKTMIDLFKARDPSSTNKATF 754 (766)
Q Consensus 705 ~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~--l~~~~~~F~~~D~d~~G~I~l 754 (766)
.+-+.. .+. +....++|.||.+++.. ++...++|...|+.++|.|+.
T Consensus 149 ~efI~~---~Fg~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~d~~~ng~is~ 198 (694)
T KOG0751|consen 149 SEFIKL---HFGDIRKRHLNYAEFTQFLHEFQLEHAEQAFREKDKAKNGFISV 198 (694)
T ss_pred cchHHH---HhhhHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcccCCCeeee
Confidence 444443 333 44557999999999864 566788999999999998843
No 62
>PF13833 EF-hand_8: EF-hand domain pair; PDB: 3KF9_A 1TTX_A 1WLZ_A 1ALV_A 1NX3_A 1ALW_A 1NX2_A 1NX1_A 1NX0_A 1DF0_A ....
Probab=98.07 E-value=9.3e-06 Score=63.64 Aligned_cols=35 Identities=20% Similarity=0.380 Sum_probs=31.6
Q ss_pred CCC-CCHHHHHHHHHhhcCCCCccccHHHHHHHHHH
Q psy14118 634 EGG-FSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKD 668 (766)
Q Consensus 634 ~~~-~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~ 668 (766)
+.. +++++++.||..+|.|++|.|+|+||+.++..
T Consensus 18 g~~~~s~~e~~~l~~~~D~~~~G~I~~~EF~~~~~~ 53 (54)
T PF13833_consen 18 GIKDLSEEEVDRLFREFDTDGDGYISFDEFISMMQR 53 (54)
T ss_dssp TSSSSCHHHHHHHHHHHTTSSSSSEEHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHhcccCCCCCCCHHHHHHHHHh
Confidence 345 88999999999999999999999999998864
No 63
>cd05023 S-100A11 S-100A11: S-100A11 domain found in proteins similar to S100A11. S100A11 is a member of the S-100 domain family within EF-hand Ca2+-binding proteins superfamily. Note that the S-100 hierarchy, to which this S-100A11 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins exhibit unique patterns of tissue- and cell type-specific expression and have been implicated in the Ca2+-dependent regulation of diverse physiological processes, including cell cycle regulation, differentiation, growth, and metabolic control . S100 proteins have also been associated with a variety of pathological events, including neoplastic transformation and neurodegenerative diseases such as Alzheimer's, usually via over expression of the protein. S100A11 is expressed in smooth muscle and other tissues and involves in calcium-dependent membrane aggregation, which is important for cell vesiculation . As is the case for many other S100 proteins, S
Probab=98.05 E-value=2.2e-05 Score=68.39 Aligned_cols=75 Identities=25% Similarity=0.387 Sum_probs=60.1
Q ss_pred chhhHHHHHHHHHHHc--CCCc-ccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHH
Q psy14118 537 KEKKTEAIRQFFQKLA--GDDM-EVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALI 613 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d--~~~g-~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (766)
-+.....+..+|++++ ++++ .|+..||+.++...+...
T Consensus 4 le~~i~~l~~~F~~y~~~dg~~~~Ls~~Elk~ll~~e~~~~--------------------------------------- 44 (89)
T cd05023 4 TERCIESLIAVFQKYAGKDGDSYQLSKTEFLSFMNTELASF--------------------------------------- 44 (89)
T ss_pred HHHHHHHHHHHHHHHhccCCCcCeECHHHHHHHHHHhhhHh---------------------------------------
Confidence 4667788999999954 4554 999999999998863210
Q ss_pred hccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 614 CGNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 614 ~~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
.....+..++.++++.+|.|+||.|+|+||+.++..+
T Consensus 45 -------------------~~~~~~~~~~~~ll~~~D~d~DG~I~f~EF~~l~~~l 81 (89)
T cd05023 45 -------------------TKNQKDPGVLDRMMKKLDLNSDGQLDFQEFLNLIGGL 81 (89)
T ss_pred -------------------hcCCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 1234567899999999999999999999999988766
No 64
>cd00052 EH Eps15 homology domain; found in proteins implicated in endocytosis, vesicle transport, and signal transduction. The alignment contains a pair of EF-hand motifs, typically one of them is canonical and binds to Ca2+, while the other may not bind to Ca2+. A hydrophobic binding pocket is formed by residues from both EF-hand motifs. The EH domain binds to proteins containing NPF (class I), [WF]W or SWG (class II), or H[TS]F (class III) sequence motifs.
Probab=98.04 E-value=1.5e-05 Score=65.07 Aligned_cols=60 Identities=28% Similarity=0.379 Sum_probs=51.7
Q ss_pred HHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccCCCCc
Q psy14118 545 RQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACRDTPL 623 (766)
Q Consensus 545 r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 623 (766)
+++|..+| +++|.|+..||+.++...
T Consensus 2 ~~~F~~~D~~~~G~i~~~el~~~l~~~----------------------------------------------------- 28 (67)
T cd00052 2 DQIFRSLDPDGDGLISGDEARPFLGKS----------------------------------------------------- 28 (67)
T ss_pred hHHHHHhCCCCCCcCcHHHHHHHHHHc-----------------------------------------------------
Confidence 67899998 899999999999999663
Q ss_pred cccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 624 GAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 624 ~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
+.+.++++.+++.+|.+++|.|+|+||+.++..+
T Consensus 29 ------------g~~~~~~~~i~~~~d~~~~g~i~~~ef~~~~~~~ 62 (67)
T cd00052 29 ------------GLPRSVLAQIWDLADTDKDGKLDKEEFAIAMHLI 62 (67)
T ss_pred ------------CCCHHHHHHHHHHhcCCCCCcCCHHHHHHHHHHH
Confidence 2367889999999999999999999999988654
No 65
>cd05031 S-100A10_like S-100A10_like: S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1_like group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=98.02 E-value=2.5e-05 Score=68.86 Aligned_cols=74 Identities=23% Similarity=0.354 Sum_probs=59.4
Q ss_pred hhhHHHHHHHHHHHc--CC-CcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 538 EKKTEAIRQFFQKLA--GD-DMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 538 ~~~~~~~r~~F~~~d--~~-~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
+.....++.+|..+| ++ +|.|+..||+.+|...+..
T Consensus 4 ~~~~~~l~~~F~~~D~~dg~dG~Is~~El~~~l~~~~g~----------------------------------------- 42 (94)
T cd05031 4 EHAMESLILTFHRYAGKDGDKNTLSRKELKKLMEKELSE----------------------------------------- 42 (94)
T ss_pred HHHHHHHHHHHHHHhccCCCCCeECHHHHHHHHHHHhHH-----------------------------------------
Confidence 344677899999997 44 6999999999999763110
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
..+..++.++++.+++.+|.+++|.|+|+||+.++..+
T Consensus 43 -----------------~lg~~~s~~ei~~~~~~~D~~~dg~I~f~eF~~l~~~~ 80 (94)
T cd05031 43 -----------------FLKNQKDPMAVDKIMKDLDQNRDGKVNFEEFVSLVAGL 80 (94)
T ss_pred -----------------HhhccccHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 01345678899999999999999999999999988765
No 66
>cd05025 S-100A1 S-100A1: S-100A1 domain found in proteins similar to S100A1. S100A1 is a calcium-binding protein belonging to a large S100 vertebrate-specific protein family within the EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A1 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. As is the case with many other members of S100 protein family, S100A1 is implicated in intracellular and extracellular regulatory activities, including interaction with myosin-associated twitchin kinase, actin-capping protein CapZ, sinapsin I, and tubulin. Structural data suggests that S100A1 proteins exist within cells as antiparallel homodimers, while heterodimers with S100A4 and S100B also has been reported. Upon binding calcium S100A1 changes conformation to expose a hydrophobic cleft which is the interaction site of S100A1 with its more that 20 known target proteins.
Probab=98.02 E-value=4.1e-05 Score=67.27 Aligned_cols=75 Identities=23% Similarity=0.366 Sum_probs=60.3
Q ss_pred hhhHHHHHHHHHHHc--CCCc-ccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 538 EKKTEAIRQFFQKLA--GDDM-EVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 538 ~~~~~~~r~~F~~~d--~~~g-~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
+...+.++++|+.+| +++| .|+..||+.+|+..+..
T Consensus 5 e~~~~~l~~~F~~fDd~dg~G~~Is~~El~~~l~~~lg~----------------------------------------- 43 (92)
T cd05025 5 ETAMETLINVFHAHSGKEGDKYKLSKKELKDLLQTELSD----------------------------------------- 43 (92)
T ss_pred HHHHHHHHHHHHHHhcccCCCCeECHHHHHHHHHHHHHH-----------------------------------------
Confidence 455678999999995 6899 59999999999763110
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHHH
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDIR 670 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~~ 670 (766)
..+..++.++++.+|+.+|.|++|.|+|+||+.++..+.
T Consensus 44 -----------------~~~~~~s~~~v~~i~~~~D~d~~G~I~f~eF~~l~~~~~ 82 (92)
T cd05025 44 -----------------FLDAQKDADAVDKIMKELDENGDGEVDFQEFVVLVAALT 82 (92)
T ss_pred -----------------HccCCCCHHHHHHHHHHHCCCCCCcCcHHHHHHHHHHHH
Confidence 002246788999999999999999999999999988763
No 67
>PF14658 EF-hand_9: EF-hand domain
Probab=97.98 E-value=2e-05 Score=63.51 Aligned_cols=60 Identities=17% Similarity=0.269 Sum_probs=55.1
Q ss_pred HHhhhhcCCCCcccCHHHHHHHHHHhCC-CCCHHHHHHHHHHcc-CCC-CcccHHHHHHHHHH
Q psy14118 674 SVFKMYDQENSGYLSPFELRQALTSAGY-HLNNHILNILAHRYS-GRD-ARISFDDFMMCAVR 733 (766)
Q Consensus 674 ~~F~~~D~d~~G~Is~~El~~~L~~~g~-~ls~~~~~~l~~~~d-d~d-G~Is~~EF~~~l~~ 733 (766)
.+|..||.++.|.|...+|..+|++++. ..++.+++.+.+.+| ++. |.|+|+.|...|..
T Consensus 2 ~~F~~fD~~~tG~V~v~~l~~~Lra~~~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 2 TAFDAFDTQKTGRVPVSDLITYLRAVTGRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred cchhhcCCcCCceEeHHHHHHHHHHHcCCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 4799999999999999999999999987 899999999999999 555 99999999998753
No 68
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.92 E-value=5.5e-05 Score=65.44 Aligned_cols=74 Identities=22% Similarity=0.340 Sum_probs=61.0
Q ss_pred hhhHHHHHHHHHHHcCCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccc
Q psy14118 538 EKKTEAIRQFFQKLAGDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNA 617 (766)
Q Consensus 538 ~~~~~~~r~~F~~~d~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (766)
+.....+-.+|.+++++.++++..||+.+|++-+...
T Consensus 4 E~ai~~lI~~FhkYaG~~~tLsk~Elk~Ll~~Elp~~------------------------------------------- 40 (91)
T cd05024 4 EHSMEKMMLTFHKFAGEKNYLNRDDLQKLMEKEFSEF------------------------------------------- 40 (91)
T ss_pred HHHHHHHHHHHHHHcCCCCcCCHHHHHHHHHHHhHHH-------------------------------------------
Confidence 4556778889999998888999999999998864321
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 618 CRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 618 ~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
....-.+..+..+|+.+|.|+||.|+|.||+.++..+
T Consensus 41 ---------------l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l 77 (91)
T cd05024 41 ---------------LKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGL 77 (91)
T ss_pred ---------------HcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHH
Confidence 0122367889999999999999999999999999876
No 69
>cd05030 calgranulins Calgranulins: S-100 domain found in proteins belonging to the Calgranulin subgroup of the S100 family of EF-hand calcium-modulated proteins, including S100A8, S100A9, and S100A12 . Note that the S-100 hierarchy, to which this Calgranulin group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. These proteins are expressed mainly in granulocytes, and are involved in inflammation, allergy, and neuritogenesis, as well as in host-parasite response. Calgranulins are modulated not only by calcium, but also by other metals such as zinc and copper. Structural data suggested that calgranulins may exist in multiple structural forms, homodimers, as well as hetero-oligomers. For example, the S100A8/S100A9 complex called calprotectin plays important roles in the regulation of inflammatory processes, wound repair, and regulating zinc-dependent enzymes as well as microbial growth.
Probab=97.87 E-value=5.5e-05 Score=65.87 Aligned_cols=74 Identities=24% Similarity=0.360 Sum_probs=58.4
Q ss_pred hhhHHHHHHHHHHHc---CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 538 EKKTEAIRQFFQKLA---GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 538 ~~~~~~~r~~F~~~d---~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
++....+...|.+++ +++|.|+..||+.+|...+...
T Consensus 4 e~~i~~~~~~f~~y~~~~~~~~~Is~~El~~ll~~~~g~~---------------------------------------- 43 (88)
T cd05030 4 EKAIETIINVFHQYSVRKGHPDTLYKKEFKQLVEKELPNF---------------------------------------- 43 (88)
T ss_pred HHHHHHHHHHHHHHhccCCCcccCCHHHHHHHHHHHhhHh----------------------------------------
Confidence 556778889999997 2478999999999997542110
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
.....+.+++..+|+.+|.+++|.|+|+||+.++..+
T Consensus 44 ------------------~t~~~~~~~v~~i~~~~D~d~dG~I~f~eF~~~~~~~ 80 (88)
T cd05030 44 ------------------LKKEKNQKAIDKIFEDLDTNQDGQLSFEEFLVLVIKV 80 (88)
T ss_pred ------------------hccCCCHHHHHHHHHHcCCCCCCcCcHHHHHHHHHHH
Confidence 0012458899999999999999999999999988754
No 70
>cd00213 S-100 S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. Intracellularly, S100 proteins act as Ca-signaling or Ca-buffering proteins. The most unusual characteristic of certain S100 proteins is their occurrence in extracellular space, where they act in a cytokine-like manner through RAGE, the receptor for advanced glycation products. Structural data suggest that many S100 members exist within cells as homo- or heterodimers and even oligomers; oligomerization contributes to their functional diversification. Upon binding calcium, most S100 proteins change conformation to a more open structure exposing a hydrophobic cleft. This hydrophobic surface represents th
Probab=97.85 E-value=8.4e-05 Score=64.62 Aligned_cols=75 Identities=29% Similarity=0.450 Sum_probs=61.2
Q ss_pred chhhHHHHHHHHHHHcC---CCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHH
Q psy14118 537 KEKKTEAIRQFFQKLAG---DDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALI 613 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d~---~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 613 (766)
-+++.+.++.+|..+|. ++|.|+..||..+++..+...
T Consensus 3 ~~~~~~~l~~~F~~~D~~~~~~G~Is~~el~~~l~~~~g~~--------------------------------------- 43 (88)
T cd00213 3 LEKAIETIIDVFHKYSGKEGDKDTLSKKELKELLETELPNF--------------------------------------- 43 (88)
T ss_pred HHHHHHHHHHHHHHHhhccCCCCcCcHHHHHHHHHHHhhhh---------------------------------------
Confidence 36778889999999974 899999999999997632100
Q ss_pred hccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 614 CGNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 614 ~~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
.+..++.+++..|+..+|.+++|.|+|+||+.++..+
T Consensus 44 -------------------~~~~~~~~ei~~i~~~~d~~~~g~I~f~eF~~~~~~~ 80 (88)
T cd00213 44 -------------------LKNQKDPEAVDKIMKDLDVNKDGKVDFQEFLVLIGKL 80 (88)
T ss_pred -------------------ccCCCCHHHHHHHHHHhccCCCCcCcHHHHHHHHHHH
Confidence 0133678899999999999999999999999988865
No 71
>KOG2562|consensus
Probab=97.79 E-value=0.00017 Score=78.46 Aligned_cols=116 Identities=15% Similarity=0.299 Sum_probs=88.9
Q ss_pred HHHHHHHhhcCCCCccccHHHHHHH-----HHHH---------------HHHHHH---hhhhcCCCCcccCHHHHHHHHH
Q psy14118 641 VCRSMVAMLDVDRSGKLGFEEFQQL-----WKDI---------------RNWKSV---FKMYDQENSGYLSPFELRQALT 697 (766)
Q Consensus 641 ~i~~l~~~~D~d~~G~I~~~EF~~~-----~~~~---------------~~l~~~---F~~~D~d~~G~Is~~El~~~L~ 697 (766)
.++.+|=.++....|+|+..|.++- +..+ +....+ |-.+|+|+||.|+.++|+..-.
T Consensus 226 vi~rIFy~~nrs~tG~iti~el~~snll~~l~~l~eEed~nq~~~~FS~e~f~viy~kFweLD~Dhd~lidk~~L~ry~d 305 (493)
T KOG2562|consen 226 VIQRIFYYLNRSRTGRITIQELLRSNLLDALLELDEEEDINQVTRYFSYEHFYVIYCKFWELDTDHDGLIDKEDLKRYGD 305 (493)
T ss_pred HhhhhheeeCCccCCceeHHHHHHhHHHHHHHHHHHHhhhhhhhhheeHHHHHHHHHHHhhhccccccccCHHHHHHHhc
Confidence 4567777889999999999997652 2111 344555 8889999999999999987643
Q ss_pred HhCCCCCHHHHHHHHHHc----c-CCCCcccHHHHHHHHHHHH------HHHHHHhccCCCCCceEEeCHHHH
Q psy14118 698 SAGYHLNNHILNILAHRY----S-GRDARISFDDFMMCAVRLK------TMIDLFKARDPSSTNKATFTLEEW 759 (766)
Q Consensus 698 ~~g~~ls~~~~~~l~~~~----d-d~dG~Is~~EF~~~l~~l~------~~~~~F~~~D~d~~G~I~lt~~ef 759 (766)
..++...++.+|.+. - ..+|+++|++|+-++..++ .+.-.|+-+|-+++|+++...-+|
T Consensus 306 ---~tlt~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~Lt~~el~~ 375 (493)
T KOG2562|consen 306 ---HTLTERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGILTLNELRY 375 (493)
T ss_pred ---cchhhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCcccHHHHHH
Confidence 346778889999833 2 6789999999999998764 566689999999999775554443
No 72
>cd05024 S-100A10 S-100A10: A subgroup of the S-100A10 domain found in proteins similar to S100A10. S100A10 is a member of the S100 family of EF-hand superfamily of calcium-binding proteins. Note that the S-100 hierarchy, to which this S-100A10 group belongs, contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 proteins are expressed exclusively in vertebrates, and are implicated in intracellular and extracellular regulatory activities. A unique feature of S100A10 is that it contains mutation in both of the calcium binding sites, making it calcium insensitive. S100A10 has been detected in brain, heart, gastrointestinal tract, kidney, liver, lung, spleen, testes, epidermis, aorta, and thymus. Structural data supports the homo- and hetero-dimeric as well as hetero-tetrameric nature of the protein. S100A10 has multiple binding partners in its calcium free state and is therefore involved in many diverse biological functions.
Probab=97.76 E-value=0.00028 Score=61.07 Aligned_cols=69 Identities=13% Similarity=0.275 Sum_probs=57.7
Q ss_pred HHHHHHHHHhhhhcCCCCcccCHHHHHHHHHH-----hCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHHH
Q psy14118 667 KDIRNWKSVFKMYDQENSGYLSPFELRQALTS-----AGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLKT 736 (766)
Q Consensus 667 ~~~~~l~~~F~~~D~d~~G~Is~~El~~~L~~-----~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~~ 736 (766)
..+..+..+|..|-. +.++++..||+.+|.. ++..-++..++.+++..| |+||.|+|.||+.++..+..
T Consensus 5 ~ai~~lI~~FhkYaG-~~~tLsk~Elk~Ll~~Elp~~l~~~~d~~~vd~im~~LD~n~Dg~vdF~EF~~Lv~~l~~ 79 (91)
T cd05024 5 HSMEKMMLTFHKFAG-EKNYLNRDDLQKLMEKEFSEFLKNQNDPMAVDKIMKDLDDCRDGKVGFQSFFSLIAGLLI 79 (91)
T ss_pred HHHHHHHHHHHHHcC-CCCcCCHHHHHHHHHHHhHHHHcCCCCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHH
Confidence 345678889999984 4679999999999975 234557889999999999 99999999999999987753
No 73
>KOG0041|consensus
Probab=97.69 E-value=0.00022 Score=69.20 Aligned_cols=96 Identities=21% Similarity=0.312 Sum_probs=73.2
Q ss_pred chhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhc
Q psy14118 537 KEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICG 615 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (766)
+.++++.+...|.++| +.||.||..||+.++.+++
T Consensus 94 srkqIk~~~~~Fk~yDe~rDgfIdl~ELK~mmEKLg-------------------------------------------- 129 (244)
T KOG0041|consen 94 SRKQIKDAESMFKQYDEDRDGFIDLMELKRMMEKLG-------------------------------------------- 129 (244)
T ss_pred HHHHHHHHHHHHHHhcccccccccHHHHHHHHHHhC--------------------------------------------
Confidence 4678899999999999 9999999999999999872
Q ss_pred cccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH--------HHHHHHhhh--hcCCCCc
Q psy14118 616 NACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI--------RNWKSVFKM--YDQENSG 685 (766)
Q Consensus 616 ~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~--------~~l~~~F~~--~D~d~~G 685 (766)
.+-+.--++.||+.+|.|.+|+|+|.||+-++... ..+..+=+. .|..+-|
T Consensus 130 -------------------apQTHL~lK~mikeVded~dgklSfreflLIfrkaaagEL~~ds~~~~LAr~~eVDVskeG 190 (244)
T KOG0041|consen 130 -------------------APQTHLGLKNMIKEVDEDFDGKLSFREFLLIFRKAAAGELQEDSGLLRLARLSEVDVSKEG 190 (244)
T ss_pred -------------------CchhhHHHHHHHHHhhcccccchhHHHHHHHHHHHhccccccchHHHHHHHhcccchhhhh
Confidence 12222346789999999999999999999988754 223333333 6777777
Q ss_pred ccCHHHHHHH
Q psy14118 686 YLSPFELRQA 695 (766)
Q Consensus 686 ~Is~~El~~~ 695 (766)
...+..|-.+
T Consensus 191 V~GAknFFeA 200 (244)
T KOG0041|consen 191 VSGAKNFFEA 200 (244)
T ss_pred hhhHHHHHHH
Confidence 7766666544
No 74
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.68 E-value=4.4e-05 Score=51.61 Aligned_cols=27 Identities=19% Similarity=0.468 Sum_probs=14.4
Q ss_pred HHHHhhhhcCCCCcccCHHHHHHHHHH
Q psy14118 672 WKSVFKMYDQENSGYLSPFELRQALTS 698 (766)
Q Consensus 672 l~~~F~~~D~d~~G~Is~~El~~~L~~ 698 (766)
++.+|+.||+|+||+|+.+||..+|+.
T Consensus 2 ~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 2 LKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred HHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 445555555555555555555555543
No 75
>cd00051 EFh EF-hand, calcium binding motif; A diverse superfamily of calcium sensors and calcium signal modulators; most examples in this alignment model have 2 active canonical EF hands. Ca2+ binding induces a conformational change in the EF-hand motif, leading to the activation or inactivation of target proteins. EF-hands tend to occur in pairs or higher copy numbers.
Probab=97.65 E-value=0.00021 Score=56.34 Aligned_cols=60 Identities=32% Similarity=0.474 Sum_probs=51.1
Q ss_pred HHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccCCCC
Q psy14118 544 IRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACRDTP 622 (766)
Q Consensus 544 ~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (766)
++.+|..+| +++|.|+..|+..++...
T Consensus 2 ~~~~f~~~d~~~~g~l~~~e~~~~l~~~---------------------------------------------------- 29 (63)
T cd00051 2 LREAFRLFDKDGDGTISADELKAALKSL---------------------------------------------------- 29 (63)
T ss_pred HHHHHHHhCCCCCCcCcHHHHHHHHHHh----------------------------------------------------
Confidence 567899888 889999999999999775
Q ss_pred ccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHH
Q psy14118 623 LGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLW 666 (766)
Q Consensus 623 l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~ 666 (766)
+...+.+.+..++..+|.+++|.|+++||..++
T Consensus 30 -----------~~~~~~~~~~~~~~~~~~~~~~~l~~~ef~~~~ 62 (63)
T cd00051 30 -----------GEGLSEEEIDEMIREVDKDGDGKIDFEEFLELM 62 (63)
T ss_pred -----------CCCCCHHHHHHHHHHhCCCCCCeEeHHHHHHHh
Confidence 245667888999999999999999999998764
No 76
>PF00036 EF-hand_1: EF hand; InterPro: IPR018248 Many calcium-binding proteins belong to the same evolutionary family and share a type of calcium-binding domain known as the EF-hand. This type of domain consists of a twelve residue loop flanked on both sides by a twelve residue alpha-helical domain. In an EF-hand loop the calcium ion is coordinated in a pentagonal bipyramidal configuration. The six residues involved in the binding are in positions 1, 3, 5, 7, 9 and 12; these residues are denoted by X, Y, Z, -Y, -X and -Z. The invariant Glu or Asp at position 12 provides two oxygens for liganding Ca (bidentate ligand).; PDB: 1BJF_A 1XFW_R 1XFV_O 2K0J_A 2F3Z_A 3BYA_A 1XFU_Q 2R28_B 1ZOT_B 3G43_D ....
Probab=97.56 E-value=7.9e-05 Score=50.34 Aligned_cols=28 Identities=32% Similarity=0.573 Sum_probs=25.9
Q ss_pred HHHHHHHhhcCCCCccccHHHHHHHHHH
Q psy14118 641 VCRSMVAMLDVDRSGKLGFEEFQQLWKD 668 (766)
Q Consensus 641 ~i~~l~~~~D~d~~G~I~~~EF~~~~~~ 668 (766)
+++.+|+.+|.|+||.|+++||+.++..
T Consensus 1 E~~~~F~~~D~d~dG~I~~~Ef~~~~~~ 28 (29)
T PF00036_consen 1 ELKEAFREFDKDGDGKIDFEEFKEMMKK 28 (29)
T ss_dssp HHHHHHHHHSTTSSSEEEHHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCCHHHHHHHHHh
Confidence 5789999999999999999999998875
No 77
>KOG0751|consensus
Probab=97.56 E-value=0.00054 Score=74.68 Aligned_cols=162 Identities=14% Similarity=0.244 Sum_probs=111.6
Q ss_pred HHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccC
Q psy14118 541 TEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACR 619 (766)
Q Consensus 541 ~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 619 (766)
...++.+|+.+| ..+|+++.+++.+++.+.- +.+
T Consensus 107 Dal~~~aFqlFDr~~~~~vs~~~~~~if~~t~---------------------------------------------l~~ 141 (694)
T KOG0751|consen 107 DALFEVAFQLFDRLGNGEVSFEDVADIFGQTN---------------------------------------------LHH 141 (694)
T ss_pred hHHHHHHHHHhcccCCCceehHHHHHHHhccc---------------------------------------------ccc
Confidence 456778899898 7899999999999986641 011
Q ss_pred CCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH--HHHHHHhhhhcCCCCcccCHHHHHHHHH
Q psy14118 620 DTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI--RNWKSVFKMYDQENSGYLSPFELRQALT 697 (766)
Q Consensus 620 ~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~--~~l~~~F~~~D~d~~G~Is~~El~~~L~ 697 (766)
..| .+.+.+.|+..|. .+....++|.||.+++... ++-+++|+..|+.++|+|+.-+++.++.
T Consensus 142 ~~~------------f~~d~efI~~~Fg---~~~~r~~ny~~f~Q~lh~~~~E~~~qafr~~d~~~ng~is~Ldfq~imv 206 (694)
T KOG0751|consen 142 HIP------------FNWDSEFIKLHFG---DIRKRHLNYAEFTQFLHEFQLEHAEQAFREKDKAKNGFISVLDFQDIMV 206 (694)
T ss_pred CCC------------ccCCcchHHHHhh---hHHHHhccHHHHHHHHHHHHHHHHHHHHHHhcccCCCeeeeechHhhhh
Confidence 111 1233344444333 3344579999999999864 7789999999999999999999999988
Q ss_pred HhCCCCCHHHHHHHHHHcc--CCCCcccHHHH---HHHHHHHHHHHHHHhccCCCCCceEEeCHHHHHHHH
Q psy14118 698 SAGYHLNNHILNILAHRYS--GRDARISFDDF---MMCAVRLKTMIDLFKARDPSSTNKATFTLEEWVENT 763 (766)
Q Consensus 698 ~~g~~ls~~~~~~l~~~~d--d~dG~Is~~EF---~~~l~~l~~~~~~F~~~D~d~~G~I~lt~~ef~~~~ 763 (766)
.....+....+++.+-... +...++||..| -+++..++.++++|..+..... .+.++++|+....
T Consensus 207 t~~~h~lt~~v~~nlv~vagg~~~H~vSf~yf~afnslL~~melirk~y~s~~~~~~-d~~~~kdq~~~~a 276 (694)
T KOG0751|consen 207 TIRIHLLTPFVEENLVSVAGGNDSHQVSFSYFNAFNSLLNNMELIRKIYSSLAGTRK-DVEVTKDQFSLAA 276 (694)
T ss_pred hhhhhcCCHHHhhhhhhhcCCCCccccchHHHHHHHHHHhhHHHHHHHHHHhccccc-chhhhHHHHHHHH
Confidence 7765555555655555544 33346777665 4556667777778877643332 3577999987553
No 78
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=97.48 E-value=0.00012 Score=50.38 Aligned_cols=30 Identities=37% Similarity=0.689 Sum_probs=25.5
Q ss_pred HHHHHhhhhcCCCCcccCHHHHHHHHH-HhC
Q psy14118 671 NWKSVFKMYDQENSGYLSPFELRQALT-SAG 700 (766)
Q Consensus 671 ~l~~~F~~~D~d~~G~Is~~El~~~L~-~~g 700 (766)
+++.+|+.+|.|++|+|+.+||+.+|+ ++|
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~~~lG 31 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILRKSLG 31 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHHHHTT
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHHHhcC
Confidence 478899999999999999999999998 565
No 79
>KOG2562|consensus
Probab=97.46 E-value=0.00046 Score=75.19 Aligned_cols=93 Identities=16% Similarity=0.285 Sum_probs=71.3
Q ss_pred CHHHHHHHHHh----hcCCCCccccHHHHHHHHHHH------HHHHHHhhhhcCCCCcccCHHHHHHHHHH-------hC
Q psy14118 638 SKDVCRSMVAM----LDVDRSGKLGFEEFQQLWKDI------RNWKSVFKMYDQENSGYLSPFELRQALTS-------AG 700 (766)
Q Consensus 638 s~~~i~~l~~~----~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~~L~~-------~g 700 (766)
+..-+..+|.. .-...+|+|+|++|+.++..+ ..++-.|+.+|.+++|.|+..||+-+... +|
T Consensus 309 t~~ivdRIFs~v~r~~~~~~eGrmdykdFv~FilA~e~k~t~~SleYwFrclDld~~G~Lt~~el~~fyeeq~~rm~~~~ 388 (493)
T KOG2562|consen 309 TERIVDRIFSQVPRGFTVKVEGRMDYKDFVDFILAEEDKDTPASLEYWFRCLDLDGDGILTLNELRYFYEEQLQRMECMG 388 (493)
T ss_pred hhHHHHHHHhhccccceeeecCcccHHHHHHHHHHhccCCCccchhhheeeeeccCCCcccHHHHHHHHHHHHHHHHhcC
Confidence 34566778873 334568999999999988876 46899999999999999999999766554 23
Q ss_pred -CCC-CHHHHHHHHHHcc-CCCCcccHHHHHHH
Q psy14118 701 -YHL-NNHILNILAHRYS-GRDARISFDDFMMC 730 (766)
Q Consensus 701 -~~l-s~~~~~~l~~~~d-d~dG~Is~~EF~~~ 730 (766)
..+ -++.+.+|+..+. ...++|++.+|..+
T Consensus 389 ~e~l~fed~l~qi~DMvkP~~~~kItLqDlk~s 421 (493)
T KOG2562|consen 389 QEALPFEDALCQIRDMVKPEDENKITLQDLKGS 421 (493)
T ss_pred CCcccHHHHHHHHHHHhCccCCCceeHHHHhhc
Confidence 222 2556677888887 67789999999873
No 80
>KOG0040|consensus
Probab=97.44 E-value=0.00091 Score=80.89 Aligned_cols=132 Identities=14% Similarity=0.264 Sum_probs=103.9
Q ss_pred cchhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 536 EKEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
-+++....+..+|+-|| +++|.++..+++.+|+..+.+-+ |+
T Consensus 2247 VtEe~L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lp---------------------------mv---------- 2289 (2399)
T KOG0040|consen 2247 VTEEQLKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLP---------------------------MV---------- 2289 (2399)
T ss_pred CCHHHHHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCc---------------------------cc----------
Confidence 47888899999999999 99999999999999988743211 11
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH--------HHHHHHhhhhcCCCCcc
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI--------RNWKSVFKMYDQENSGY 686 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~--------~~l~~~F~~~D~d~~G~ 686 (766)
..+-.+-+.+.++..+|++.+|.|+..+|+++|... +.+..+|+.+|. +.-|
T Consensus 2290 -------------------Ee~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeNI~s~~eIE~AfraL~a-~~~y 2349 (2399)
T KOG0040|consen 2290 -------------------EEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETENILSSEEIEDAFRALDA-GKPY 2349 (2399)
T ss_pred -------------------ccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhcccccccchHHHHHHHHHhhc-CCcc
Confidence 112233478899999999999999999999999864 689999999999 7899
Q ss_pred cCHHHHHHHHHHhCCCCCHHHHHHHHHHcc----CCC-----CcccHHHHHHHH
Q psy14118 687 LSPFELRQALTSAGYHLNNHILNILAHRYS----GRD-----ARISFDDFMMCA 731 (766)
Q Consensus 687 Is~~El~~~L~~~g~~ls~~~~~~l~~~~d----d~d-----G~Is~~EF~~~l 731 (766)
|+.+++... ++.++++.++.++. ... +.++|.+|+..+
T Consensus 2350 vtke~~~~~-------ltreqaefc~s~m~~~~e~~~~~s~q~~l~y~dfv~sl 2396 (2399)
T KOG0040|consen 2350 VTKEELYQN-------LTREQAEFCMSKMKPYAETSSGRSDQVALDYKDFVNSL 2396 (2399)
T ss_pred ccHHHHHhc-------CCHHHHHHHHHHhhhhcccccCCCccccccHHHHHHHH
Confidence 999998654 57788877777653 211 358888988754
No 81
>cd00252 SPARC_EC SPARC_EC; extracellular Ca2+ binding domain (containing 2 EF-hand motifs) of SPARC and related proteins (QR1, SC1/hevin, testican and tsc-36/FRP). SPARC (BM-40) is a multifunctional glycoprotein, a matricellular protein, that functions to regulate cell-matrix interactions; binds to such proteins as collagen and vitronectin and binds to endothelial cells thus inhibiting cellular proliferation. The EC domain interacts with a follistatin-like (FS) domain which appears to stabilize Ca2+ binding. The two EF-hands interact canonically but their conserved disulfide bonds confer a tight association between the EF-hand pair and an acid/amphiphilic N-terminal helix. Proposed active form involves a Ca2+ dependent symmetric homodimerization of EC-FS modules.
Probab=97.40 E-value=0.00037 Score=63.72 Aligned_cols=61 Identities=26% Similarity=0.278 Sum_probs=52.9
Q ss_pred CCCHHHHHHHHHhhcCCCCccccHHHHHHHHHH--HHHHHHHhhhhcCCCCcccCHHHHHHHH
Q psy14118 636 GFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKD--IRNWKSVFKMYDQENSGYLSPFELRQAL 696 (766)
Q Consensus 636 ~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~--~~~l~~~F~~~D~d~~G~Is~~El~~~L 696 (766)
..-...+.-+|..+|.|+||.|+.+|+..+... -..+...|+.+|.|++|.||.+|+...|
T Consensus 44 ~~~~~~l~w~F~~lD~d~DG~Ls~~EL~~~~l~~~e~~~~~f~~~~D~n~Dg~IS~~Ef~~cl 106 (116)
T cd00252 44 PMCKDPVGWMFNQLDGNYDGKLSHHELAPIRLDPNEHCIKPFFESCDLDKDGSISLDEWCYCF 106 (116)
T ss_pred HHHHHHHHHHHHHHCCCCCCcCCHHHHHHHHccchHHHHHHHHHHHCCCCCCCCCHHHHHHHH
Confidence 345678899999999999999999999987522 2567889999999999999999999988
No 82
>KOG4666|consensus
Probab=97.34 E-value=0.00026 Score=73.44 Aligned_cols=102 Identities=15% Similarity=0.125 Sum_probs=84.0
Q ss_pred HHHHHHHHhhcCCCCccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCcccCHHHHHHHHHHh-CCCCCHHHHHHH
Q psy14118 640 DVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYLSPFELRQALTSA-GYHLNNHILNIL 711 (766)
Q Consensus 640 ~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~-g~~ls~~~~~~l 711 (766)
+..+.+|..||.+.+|.++|.|....+..+ ..++-+|+.|+.+.||.+...+|.-+|+.. | +..-.+-.+
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lg--v~~l~v~~l 336 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLG--VEVLRVPVL 336 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcC--cceeecccc
Confidence 567889999999999999999988876643 678999999999999999999999998864 4 233335568
Q ss_pred HHHcc-CCCCcccHHHHHHHHHHHHHHHHHHhc
Q psy14118 712 AHRYS-GRDARISFDDFMMCAVRLKTMIDLFKA 743 (766)
Q Consensus 712 ~~~~d-d~dG~Is~~EF~~~l~~l~~~~~~F~~ 743 (766)
+...+ ..+|+|+|++|.+++.....+...|..
T Consensus 337 f~~i~q~d~~ki~~~~f~~fa~~~p~~a~~~~~ 369 (412)
T KOG4666|consen 337 FPSIEQKDDPKIYASNFRKFAATEPNLALSELG 369 (412)
T ss_pred chhhhcccCcceeHHHHHHHHHhCchhhhhhhc
Confidence 88888 778999999999999877766655543
No 83
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=97.32 E-value=0.00082 Score=60.20 Aligned_cols=69 Identities=26% Similarity=0.421 Sum_probs=59.4
Q ss_pred chhhHHHHHHHHHHHcCCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhcc
Q psy14118 537 KEKKTEAIRQFFQKLAGDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGN 616 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 616 (766)
++++.+.++++|+.++.++|.|+-.+...+|.+.
T Consensus 5 s~~e~~~y~~~F~~l~~~~g~isg~~a~~~f~~S---------------------------------------------- 38 (104)
T PF12763_consen 5 SPEEKQKYDQIFQSLDPQDGKISGDQAREFFMKS---------------------------------------------- 38 (104)
T ss_dssp SCCHHHHHHHHHHCTSSSTTEEEHHHHHHHHHHT----------------------------------------------
T ss_pred CHHHHHHHHHHHHhcCCCCCeEeHHHHHHHHHHc----------------------------------------------
Confidence 4667889999999998778999999999988663
Q ss_pred ccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHHH
Q psy14118 617 ACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDIR 670 (766)
Q Consensus 617 ~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~~ 670 (766)
+++.+.+..|+...|.|++|.++++||+.++..+.
T Consensus 39 -------------------~L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~ 73 (104)
T PF12763_consen 39 -------------------GLPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLIN 73 (104)
T ss_dssp -------------------TSSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHH
T ss_pred -------------------CCCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHH
Confidence 56788999999999999999999999999887653
No 84
>KOG4251|consensus
Probab=97.32 E-value=0.00012 Score=72.90 Aligned_cols=93 Identities=19% Similarity=0.274 Sum_probs=72.6
Q ss_pred CHHHHHHHHHhhcCCCCccccHHHHHHHHHH---------H------HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCC
Q psy14118 638 SKDVCRSMVAMLDVDRSGKLGFEEFQQLWKD---------I------RNWKSVFKMYDQENSGYLSPFELRQALTSAGYH 702 (766)
Q Consensus 638 s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~---------~------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ 702 (766)
-...++.++..+|.|++..++..||+.+..- + +..++.=..+|.|++|.++++||..++....+.
T Consensus 234 LrfmVkeivrdlDqdgDkqlSvpeFislpvGTVenqqgqdiddnwvkdRkkEFeElIDsNhDGivTaeELe~y~dP~n~~ 313 (362)
T KOG4251|consen 234 LRFMVKEIVRDLDQDGDKQLSVPEFISLPVGTVENQQGQDIDDNWVKDRKKEFEELIDSNHDGIVTAEELEDYVDPQNFR 313 (362)
T ss_pred HHHHHHHHHHHhccCCCeeecchhhhcCCCcchhhhhccchHHHHHHHHHHHHHHHhhcCCccceeHHHHHhhcCchhhh
Confidence 3456778888999999999999999885421 1 234444457899999999999999987766666
Q ss_pred CCHHHHHHHHHHcc-CCCCcccHHHHHHH
Q psy14118 703 LNNHILNILAHRYS-GRDARISFDDFMMC 730 (766)
Q Consensus 703 ls~~~~~~l~~~~d-d~dG~Is~~EF~~~ 730 (766)
+...++..++...| ++|.+++.+|.+..
T Consensus 314 ~alne~~~~ma~~d~n~~~~Ls~eell~r 342 (362)
T KOG4251|consen 314 LALNEVNDIMALTDANNDEKLSLEELLER 342 (362)
T ss_pred hhHHHHHHHHhhhccCCCcccCHHHHHHH
Confidence 77777888888888 89999999987653
No 85
>KOG0040|consensus
Probab=97.18 E-value=0.0014 Score=79.49 Aligned_cols=88 Identities=26% Similarity=0.455 Sum_probs=73.8
Q ss_pred HHHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCC--H-----HHHHHHHHHcc-CCCCcccHHHHHHHHHHH------
Q psy14118 669 IRNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLN--N-----HILNILAHRYS-GRDARISFDDFMMCAVRL------ 734 (766)
Q Consensus 669 ~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls--~-----~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l------ 734 (766)
+.++..+|+.||++++|.++.++|+.+|+.+|+.++ + .+++.++...| +.+|.|+..+|+.+|...
T Consensus 2252 L~EFs~~fkhFDkek~G~Ldhq~F~sCLrslgY~lpmvEe~~~~p~fe~~ld~vDP~r~G~Vsl~dY~afmi~~ETeNI~ 2331 (2399)
T KOG0040|consen 2252 LKEFSMMFKHFDKEKNGRLDHQHFKSCLRSLGYDLPMVEEGEPEPEFEEILDLVDPNRDGYVSLQDYMAFMISKETENIL 2331 (2399)
T ss_pred HHHHHHHHHHhchhhccCCcHHHHHHHHHhcCCCCcccccCCCChhHHHHHHhcCCCCcCcccHHHHHHHHHhccccccc
Confidence 467889999999999999999999999999998762 2 37899999999 999999999999999753
Q ss_pred --HHHHHHHhccCCCCCceEEeCHHHH
Q psy14118 735 --KTMIDLFKARDPSSTNKATFTLEEW 759 (766)
Q Consensus 735 --~~~~~~F~~~D~d~~G~I~lt~~ef 759 (766)
+.+..+|+.+|. +.- ++++++.
T Consensus 2332 s~~eIE~AfraL~a-~~~--yvtke~~ 2355 (2399)
T KOG0040|consen 2332 SSEEIEDAFRALDA-GKP--YVTKEEL 2355 (2399)
T ss_pred chHHHHHHHHHhhc-CCc--cccHHHH
Confidence 467889999998 333 5566554
No 86
>KOG1029|consensus
Probab=97.17 E-value=0.0038 Score=71.42 Aligned_cols=63 Identities=27% Similarity=0.473 Sum_probs=54.5
Q ss_pred HHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHH
Q psy14118 671 NWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLK 735 (766)
Q Consensus 671 ~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~ 735 (766)
.++.+|+.+|+..+|+|+...-+.+|-..+ ++...+..|....| |+||+++-+||+-.|...+
T Consensus 196 KY~QlFNa~DktrsG~Lsg~qaR~aL~qS~--Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~lie 259 (1118)
T KOG1029|consen 196 KYRQLFNALDKTRSGYLSGQQARSALGQSG--LPQNQLAHIWTLSDVDGDGKLSADEFILAMHLIE 259 (1118)
T ss_pred HHHHHhhhcccccccccccHHHHHHHHhcC--CchhhHhhheeeeccCCCCcccHHHHHHHHHHHH
Confidence 468999999999999999999999987644 67788888888889 9999999999998775443
No 87
>PF14658 EF-hand_9: EF-hand domain
Probab=97.09 E-value=0.0017 Score=52.56 Aligned_cols=60 Identities=17% Similarity=0.263 Sum_probs=52.9
Q ss_pred HHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccCCCCccc
Q psy14118 547 FFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACRDTPLGA 625 (766)
Q Consensus 547 ~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 625 (766)
.|+.+| ++.|.|...+|..+|+...
T Consensus 3 ~F~~fD~~~tG~V~v~~l~~~Lra~~------------------------------------------------------ 28 (66)
T PF14658_consen 3 AFDAFDTQKTGRVPVSDLITYLRAVT------------------------------------------------------ 28 (66)
T ss_pred chhhcCCcCCceEeHHHHHHHHHHHc------------------------------------------------------
Confidence 588888 8999999999999998861
Q ss_pred cccccccCCCCCCHHHHHHHHHhhcCCCC-ccccHHHHHHHHHH
Q psy14118 626 ALETKTTTEGGFSKDVCRSMVAMLDVDRS-GKLGFEEFQQLWKD 668 (766)
Q Consensus 626 ~~~~~~~~~~~~s~~~i~~l~~~~D~d~~-G~I~~~EF~~~~~~ 668 (766)
+..+++++++.+.+.+|+++. |.|+|+.|+.+|..
T Consensus 29 --------~~~p~e~~Lq~l~~elDP~g~~~~v~~d~F~~iM~~ 64 (66)
T PF14658_consen 29 --------GRSPEESELQDLINELDPEGRDGSVNFDTFLAIMRD 64 (66)
T ss_pred --------CCCCcHHHHHHHHHHhCCCCCCceEeHHHHHHHHHH
Confidence 236888999999999999998 99999999998864
No 88
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=97.07 E-value=0.0015 Score=72.25 Aligned_cols=58 Identities=24% Similarity=0.405 Sum_probs=45.7
Q ss_pred CCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHHHHHHHHhhhhcCCCCcccCHHHHHHHHHH
Q psy14118 634 EGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDIRNWKSVFKMYDQENSGYLSPFELRQALTS 698 (766)
Q Consensus 634 ~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~L~~ 698 (766)
+.......++.+|+.+|.|++|.|+.+||.. ...+|..+|.|++|.|+.+||..++..
T Consensus 328 ~~~~~~~~l~~aF~~~D~dgdG~Is~~E~~~-------~~~~F~~~D~d~DG~Is~eEf~~~~~~ 385 (391)
T PRK12309 328 GGEAFTHAAQEIFRLYDLDGDGFITREEWLG-------SDAVFDALDLNHDGKITPEEMRAGLGA 385 (391)
T ss_pred ccChhhHHHHHHHHHhCCCCCCcCcHHHHHH-------HHHHHHHhCCCCCCCCcHHHHHHHHHH
Confidence 3445567888888889999999999998853 466788888888888888888887764
No 89
>PF12763 EF-hand_4: Cytoskeletal-regulatory complex EF hand; PDB: 2QPT_A 2KSP_A 2KFG_A 2JQ6_A 2KFH_A 2KFF_A 1IQ3_A 3FIA_A 2KHN_A 2KGR_A ....
Probab=96.96 E-value=0.0036 Score=56.06 Aligned_cols=64 Identities=17% Similarity=0.403 Sum_probs=54.7
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLKT 736 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~~ 736 (766)
..+..+|...|. ++|.|+.++.+.+|...| ++.+.+..|....| ++||.++++||+-+|..+..
T Consensus 10 ~~y~~~F~~l~~-~~g~isg~~a~~~f~~S~--L~~~~L~~IW~LaD~~~dG~L~~~EF~iAm~Li~~ 74 (104)
T PF12763_consen 10 QKYDQIFQSLDP-QDGKISGDQAREFFMKSG--LPRDVLAQIWNLADIDNDGKLDFEEFAIAMHLINR 74 (104)
T ss_dssp HHHHHHHHCTSS-STTEEEHHHHHHHHHHTT--SSHHHHHHHHHHH-SSSSSEEEHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCC-CCCeEeHHHHHHHHHHcC--CCHHHHHHHHhhhcCCCCCcCCHHHHHHHHHHHHH
Confidence 567889999985 689999999999998765 78899999999999 99999999999988765543
No 90
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=96.86 E-value=0.0031 Score=48.15 Aligned_cols=49 Identities=16% Similarity=0.216 Sum_probs=39.4
Q ss_pred ccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHH
Q psy14118 686 YLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRL 734 (766)
Q Consensus 686 ~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l 734 (766)
+++..|++.+|+.+.+.++++.+..+|+..| +++|++..+||..+...|
T Consensus 1 kmsf~Evk~lLk~~NI~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~L 50 (51)
T PF14788_consen 1 KMSFKEVKKLLKMMNIEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKRL 50 (51)
T ss_dssp EBEHHHHHHHHHHTT----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHccCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHHh
Confidence 4688999999999999999999999999999 999999999999887654
No 91
>smart00230 CysPc Calpain-like thiol protease family. Calpain-like thiol protease family (peptidase family C2). Calcium activated neutral protease (large subunit).
Probab=96.86 E-value=0.00085 Score=72.86 Aligned_cols=54 Identities=61% Similarity=1.175 Sum_probs=48.2
Q ss_pred cccCCCCCcccccCchhhhhcCccccCCCceeeecccccccccceEEeecCCCc
Q psy14118 295 GVTAGGSQEWRFIPDHEKRELGLTFDDDGEFWMSYKDFLKYFSRLEICNLSPDS 348 (766)
Q Consensus 295 ~~~~~~~~~W~ll~rh~~~~lg~~~~~~g~~~~~~~d~~~~~~~i~~~~l~~~~ 348 (766)
|..+..++.|...++..++.+++..+++|+|||+|+||+++|+.+.+|.+.|+.
T Consensus 260 G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~FWM~~~df~~~F~~~~vc~~~~~~ 313 (318)
T smart00230 260 GPWSDDSPEWRSVSASEKKNLGLTFDDDGEFWMSFEDFLRHFDKVEICNLNPDS 313 (318)
T ss_pred CCCCCCCccccccCHHHHHHhCCCCCCCCEEEEEhHHHHhhCCeEEEeccCCcc
Confidence 455678899998888888889999999999999999999999999999988764
No 92
>KOG0377|consensus
Probab=96.84 E-value=0.0077 Score=65.14 Aligned_cols=124 Identities=20% Similarity=0.309 Sum_probs=86.1
Q ss_pred HHHHHHHHHhhcCCCCccccHHHHHHHHHHHHH----HHHH-hhhhcCCCCcccCHHHHHHHHHH------hCCC-----
Q psy14118 639 KDVCRSMVAMLDVDRSGKLGFEEFQQLWKDIRN----WKSV-FKMYDQENSGYLSPFELRQALTS------AGYH----- 702 (766)
Q Consensus 639 ~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~~~----l~~~-F~~~D~d~~G~Is~~El~~~L~~------~g~~----- 702 (766)
..++..-|+.+|.++.|.|+...+...+..+-. |+.+ =+....+.+|++...+-.+.+.. ++..
T Consensus 463 ~sdL~~eF~~~D~~ksG~lsis~Wa~~mE~i~~L~LPWr~L~~kla~~s~d~~v~Y~~~~~~l~~e~~~~ea~~slvetL 542 (631)
T KOG0377|consen 463 RSDLEDEFRKYDPKKSGKLSISHWAKCMENITGLNLPWRLLRPKLANGSDDGKVEYKSTLDNLDTEVILEEAGSSLVETL 542 (631)
T ss_pred hhHHHHHHHhcChhhcCeeeHHHHHHHHHHHhcCCCcHHHhhhhccCCCcCcceehHhHHHHhhhhhHHHHHHhHHHHHH
Confidence 457788899999999999999999999887622 1111 22233344566655443333221 1111
Q ss_pred -CCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHH----------HHHHHHHhccCCCCCceEEeCHHHHHHHHh
Q psy14118 703 -LNNHILNILAHRYS-GRDARISFDDFMMCAVRL----------KTMIDLFKARDPSSTNKATFTLEEWVENTL 764 (766)
Q Consensus 703 -ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l----------~~~~~~F~~~D~d~~G~I~lt~~ef~~~~~ 764 (766)
-....++.+|+.+| |+.|.|+.+||..+..-+ ..+.++-..+|.++||.| .+.||+.+..
T Consensus 543 Yr~ks~LetiF~~iD~D~SG~isldEF~~a~~l~~sh~~~~i~~~~i~~la~~mD~NkDG~I--DlNEfLeAFr 614 (631)
T KOG0377|consen 543 YRNKSSLETIFNIIDADNSGEISLDEFRTAWKLLSSHMNGAISDDEILELARSMDLNKDGKI--DLNEFLEAFR 614 (631)
T ss_pred HhchhhHHHHHHHhccCCCCceeHHHHHHHHHHHHhhcCCCcCHHHHHHHHHhhccCCCCcc--cHHHHHHHHh
Confidence 12345788999999 999999999999887543 356777888999999955 8889998753
No 93
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.83 E-value=0.0011 Score=43.11 Aligned_cols=23 Identities=26% Similarity=0.492 Sum_probs=13.5
Q ss_pred HHHhhhhcCCCCcccCHHHHHHH
Q psy14118 673 KSVFKMYDQENSGYLSPFELRQA 695 (766)
Q Consensus 673 ~~~F~~~D~d~~G~Is~~El~~~ 695 (766)
+.+|+.+|.|+||.|+.+||.++
T Consensus 2 ~~~F~~~D~d~DG~is~~E~~~~ 24 (25)
T PF13202_consen 2 KDAFQQFDTDGDGKISFEEFQRL 24 (25)
T ss_dssp HHHHHHHTTTSSSEEEHHHHHHH
T ss_pred HHHHHHHcCCCCCcCCHHHHHHH
Confidence 44566666666666666666553
No 94
>KOG0038|consensus
Probab=96.65 E-value=0.007 Score=56.01 Aligned_cols=90 Identities=13% Similarity=0.177 Sum_probs=69.6
Q ss_pred HHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCH-HHHHHHHHHcc-CCCCcccHHHHHHHHHHHH-----------HHHH
Q psy14118 673 KSVFKMYDQENSGYLSPFELRQALTSAGYHLNN-HILNILAHRYS-GRDARISFDDFMMCAVRLK-----------TMID 739 (766)
Q Consensus 673 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~-~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~-----------~~~~ 739 (766)
+++-..|..||.|.++.++|..++.-+....+. -.+...++.|| |+|+.|.-++...++.++. -..+
T Consensus 74 ~ri~e~FSeDG~GnlsfddFlDmfSV~sE~APrdlK~~YAFkIYDfd~D~~i~~~DL~~~l~~lTr~eLs~eEv~~i~ek 153 (189)
T KOG0038|consen 74 RRICEVFSEDGRGNLSFDDFLDMFSVFSEMAPRDLKAKYAFKIYDFDGDEFIGHDDLEKTLTSLTRDELSDEEVELICEK 153 (189)
T ss_pred HHHHHHhccCCCCcccHHHHHHHHHHHHhhChHHhhhhheeEEeecCCCCcccHHHHHHHHHHHhhccCCHHHHHHHHHH
Confidence 466677889999999999999988876443222 23455678899 9999999999988887653 2345
Q ss_pred HHhccCCCCCceEEeCHHHHHHHHh
Q psy14118 740 LFKARDPSSTNKATFTLEEWVENTL 764 (766)
Q Consensus 740 ~F~~~D~d~~G~I~lt~~ef~~~~~ 764 (766)
+....|.|++| +|++.+|-.+++
T Consensus 154 vieEAD~DgDg--kl~~~eFe~~i~ 176 (189)
T KOG0038|consen 154 VIEEADLDGDG--KLSFAEFEHVIL 176 (189)
T ss_pred HHHHhcCCCCC--cccHHHHHHHHH
Confidence 67888999999 668999988775
No 95
>KOG0045|consensus
Probab=96.65 E-value=0.001 Score=77.49 Aligned_cols=62 Identities=45% Similarity=0.977 Sum_probs=52.2
Q ss_pred cccceeccccccccccCCCCCcccccCchhhhhcCccccCCCceeeecccccccccceEEeecCCCc
Q psy14118 282 KWEMSVYEGEWVRGVTAGGSQEWRFIPDHEKRELGLTFDDDGEFWMSYKDFLKYFSRLEICNLSPDS 348 (766)
Q Consensus 282 ~w~~~~~~~~~~~~~~~~~~~~W~ll~rh~~~~lg~~~~~~g~~~~~~~d~~~~~~~i~~~~l~~~~ 348 (766)
+|....++|.| +.+++.|..+....+..++....+||+|||++.||+++|+.+++|++.+..
T Consensus 273 Pwg~~~W~G~w-----sd~~~~W~~v~~~~~~~~~~~~~~dGeFWms~~dF~~~F~~~~vC~~~~~~ 334 (612)
T KOG0045|consen 273 PWGESEWNGPW-----SDGSEEWHLVDKSKLSELGRQPLDDGEFWMSFDDFLREFDSLTVCRLRPDW 334 (612)
T ss_pred CcCCceecccc-----ccCCcchhhhCHHHHhhcccccccCCCeeeeHHHHHhhCCeEeecCCCcch
Confidence 34434444444 678999999999999999888899999999999999999999999988764
No 96
>PRK12309 transaldolase/EF-hand domain-containing protein; Provisional
Probab=96.55 E-value=0.0047 Score=68.43 Aligned_cols=50 Identities=14% Similarity=0.316 Sum_probs=43.1
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAV 732 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~ 732 (766)
..++.+|+.+|.|++|+|+.+||.. ++.+|..+| |+||.|+++||...+.
T Consensus 334 ~~l~~aF~~~D~dgdG~Is~~E~~~-------------~~~~F~~~D~d~DG~Is~eEf~~~~~ 384 (391)
T PRK12309 334 HAAQEIFRLYDLDGDGFITREEWLG-------------SDAVFDALDLNHDGKITPEEMRAGLG 384 (391)
T ss_pred HHHHHHHHHhCCCCCCcCcHHHHHH-------------HHHHHHHhCCCCCCCCcHHHHHHHHH
Confidence 5678899999999999999999832 567899999 9999999999998764
No 97
>PF13202 EF-hand_5: EF hand; PDB: 3DD4_A 2Q4U_A 2BE4_A 1UHJ_B 1UHI_A 1UHH_B 1EJ3_B 1UHK_A 2ZFD_A 1UHN_A ....
Probab=96.35 E-value=0.0041 Score=40.43 Aligned_cols=25 Identities=40% Similarity=0.675 Sum_probs=22.2
Q ss_pred HHHHHHhhcCCCCccccHHHHHHHH
Q psy14118 642 CRSMVAMLDVDRSGKLGFEEFQQLW 666 (766)
Q Consensus 642 i~~l~~~~D~d~~G~I~~~EF~~~~ 666 (766)
++.+|+.+|.|++|.|+++||..++
T Consensus 1 l~~~F~~~D~d~DG~is~~E~~~~~ 25 (25)
T PF13202_consen 1 LKDAFQQFDTDGDGKISFEEFQRLV 25 (25)
T ss_dssp HHHHHHHHTTTSSSEEEHHHHHHHH
T ss_pred CHHHHHHHcCCCCCcCCHHHHHHHC
Confidence 4678999999999999999998863
No 98
>PF00648 Peptidase_C2: Calpain family cysteine protease This is family C2 in the peptidase classification. ; InterPro: IPR001300 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the MEROPS peptidase family C2 (calpain family, clan CA). A type example is calpain, which is an intracellular protease involved in many important cellular functions that are regulated by calcium []. The protein is a complex of 2 polypeptide chains (light and heavy), with three known forms in mammals [, ]: a highly calcium-sensitive (i.e., micro-molar range) form known as mu-calpain, mu-CANP or calpain I; a form sensitive to calcium in the milli-molar range, known as m-calpain, m-CANP or calpain II; and a third form, known as p94, which is found in skeletal muscle only []. All forms have identical light but different heavy chains. Both mu- and m-calpain are heterodimers containing an identical 28kDa subunit and an 80kDa subunit that shares 55-65% sequence homology between the two proteases [, ]. The crystallographic structure of m-calpain reveals six "domains" in the 80kDa subunit: A 19-amino acid NH2-terminal sequence; Active site domain IIa; Active site domain IIb. Domain 2 shows low levels of sequence similarity to papain; although the catalytic His has not been located by biochemical means, it is likely that calpain and papain are related []. Domain III; An 18-amino acid extended sequence linking domain III to domain IV; Domain IV, which resembles the penta EF-hand family of polypeptides, binds calcium and regulates activity []. />]. Ca2+-binding causes a rearrangement of the protein backbone, the net effect of which is that a Trp side chain, which acts as a wedge between catalytic domains IIa and IIb in the apo state, moves away from the active site cleft allowing for the proper formation of the catalytic triad []. Calpain-like mRNAs have been identified in other organisms including bacteria, but the molecules encoded by these mRNAs have not been isolated, so little is known about their properties. How calpain activity is regulated in these organisms cells is still unclear In metazoans, the activity of calpain is controlled by a single proteinase inhibitor, calpastatin (IPR001259 from INTERPRO). The calpastatin gene can produce eight or more calpastatin polypeptides ranging from 17 to 85 kDa by use of different promoters and alternative splicing events. The physiological significance of these different calpastatins is unclear, although all bind to three different places on the calpain molecule; binding to at least two of the sites is Ca2+ dependent. The calpains ostensibly participate in a variety of cellular processes including remodelling of cytoskeletal/membrane attachments, different signal transduction pathways, and apoptosis. Deregulated calpain activity following loss of Ca2+ homeostasis results in tissue damage in response to events such as myocardial infarcts, stroke, and brain trauma []. Calpains are a family of cytosolic cysteine proteinases (see PDOC00126 from PROSITEDOC). Members of the calpain family are believed to function in various biological processes, including integrin-mediated cell migration, cytoskeletal remodeling, cell differentiation and apoptosis [, ]. The calpain family includes numerous members from C. elegans to mammals and with homologues in yeast and bacteria. The best characterised members are the m- and mu-calpains, both proteins are heterodimer composed of a large catalytic subunit and a small regulatory subunit. The large subunit comprises four domains (dI-dIV) while the small subunit has two domains (dV-dVI). Domain dI is a short region cleaved by autolysis, dII is the catalytic core, dIII is a C2-like domain, dIV consists of five calcium binding EF-hand motifs []. The crystal structure of calpain has been solved [, ]. The catalytic region consists of two distinct structural domains (dIIa and dIIb). dIIa contains a central helix flanked on three faces by a cluster of alpha-helices and is entirely unrelated to the corresponding domain in the typical thiol proteinases. The fold of dIIb is similar to the corresponding domain in other cysteine proteinases and contains two three-stranded anti-parallel beta-sheets. The catalytic triad residues (C,H,N) are located in dIIa and dIIb. The activation of the domain is dependent on the binding of two calcium atoms in two non EF-hand calcium binding sites located in the catalytic core, one close to the Cys active site in dIIa and one at the end of dIIb. Calcium-binding induced conformational changes in the catalytic domain which align the active site [][]. The profile covers the whole catalytic domain.; GO: 0004198 calcium-dependent cysteine-type endopeptidase activity, 0006508 proteolysis, 0005622 intracellular; PDB: 2NQA_A 1KFU_L 1KFX_L 1QXP_B 2R9C_A 1TL9_A 2G8E_A 1KXR_B 2G8J_A 2NQG_A ....
Probab=96.27 E-value=0.0029 Score=68.16 Aligned_cols=50 Identities=44% Similarity=0.858 Sum_probs=43.2
Q ss_pred cccCCCCCcccccCchhhhhcCccccCCCceeeecccccccccceEEeec
Q psy14118 295 GVTAGGSQEWRFIPDHEKRELGLTFDDDGEFWMSYKDFLKYFSRLEICNL 344 (766)
Q Consensus 295 ~~~~~~~~~W~ll~rh~~~~lg~~~~~~g~~~~~~~d~~~~~~~i~~~~l 344 (766)
|..+..++.|..+++-.++.++....+||.|||+|+||+++|+.|++|++
T Consensus 248 G~ws~~s~~W~~~~~~~~~~~~~~~~~dg~FWM~~~df~~~F~~i~vc~~ 297 (298)
T PF00648_consen 248 GDWSDDSPEWTEIHPSLRKRLNQSSSDDGTFWMSFEDFLKYFSSIYVCRL 297 (298)
T ss_dssp STTSTTSGGGGGS-HHHHHHHTTTSSSSSEEEEEHHHHHHHSEEEEEEES
T ss_pred ccccccccccccCCHHHHhhcccccccCccHhHhHHHHHhhCCceEEEee
Confidence 45566788899877778888888888999999999999999999999987
No 99
>KOG0046|consensus
Probab=96.13 E-value=0.013 Score=64.82 Aligned_cols=66 Identities=26% Similarity=0.476 Sum_probs=57.2
Q ss_pred HHHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCC---CHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHH
Q psy14118 669 IRNWKSVFKMYDQENSGYLSPFELRQALTSAGYHL---NNHILNILAHRYS-GRDARISFDDFMMCAVRLK 735 (766)
Q Consensus 669 ~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~l---s~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~ 735 (766)
+..++..|...| |++|+|+..|+..++.+.+... ..++++.++...+ |.+|+|+|++|+.++..+.
T Consensus 18 l~~l~~kF~~~d-~~~G~v~~~~l~~~f~k~~~~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l~ 87 (627)
T KOG0046|consen 18 LRELKEKFNKLD-DQKGYVTVYELPDAFKKAKLPLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNLK 87 (627)
T ss_pred HHHHHHHHHhhc-CCCCeeehHHhHHHHHHhcccccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhhh
Confidence 456788999999 9999999999999999886543 5788999999999 9999999999999876553
No 100
>KOG0169|consensus
Probab=96.10 E-value=0.061 Score=62.67 Aligned_cols=132 Identities=22% Similarity=0.308 Sum_probs=108.7
Q ss_pred chhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhc
Q psy14118 537 KEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICG 615 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (766)
..+...-+..+|++.| +++|.++..+...+++.+
T Consensus 131 ~~~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~--------------------------------------------- 165 (746)
T KOG0169|consen 131 RSRREHWIHSIFQEADKNKNGHMSFDEVLDLLKQL--------------------------------------------- 165 (746)
T ss_pred cchHHHHHHHHHHHHccccccccchhhHHHHHHHH---------------------------------------------
Confidence 3555667788999999 899999999999998775
Q ss_pred cccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH---HHHHHHhhhhcCCCCcccCHHHH
Q psy14118 616 NACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI---RNWKSVFKMYDQENSGYLSPFEL 692 (766)
Q Consensus 616 ~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~---~~l~~~F~~~D~d~~G~Is~~El 692 (766)
...++...+..+|+..|...++++..++|..+...+ .++..+|..+-.+ .++++.++|
T Consensus 166 ------------------n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rpev~~~f~~~s~~-~~~ls~~~L 226 (746)
T KOG0169|consen 166 ------------------NVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRPEVYFLFVQYSHG-KEYLSTDDL 226 (746)
T ss_pred ------------------HHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCchHHHHHHHHhCC-CCccCHHHH
Confidence 234566778889999998899999999999987764 4788888888765 999999999
Q ss_pred HHHHHHhC--CCCCHHHHHHHHHHcc-C----CCCcccHHHHHHHHH
Q psy14118 693 RQALTSAG--YHLNNHILNILAHRYS-G----RDARISFDDFMMCAV 732 (766)
Q Consensus 693 ~~~L~~~g--~~ls~~~~~~l~~~~d-d----~dG~Is~~EF~~~l~ 732 (766)
..+|...+ ..++.+.++++++.+. . ..+.++++.|..+|.
T Consensus 227 ~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~~l~ldgF~~yL~ 273 (746)
T KOG0169|consen 227 LRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHGLLSLDGFTRYLF 273 (746)
T ss_pred HHHHHHhcccccccHHHHHHHHHHhhhhhhccccceecHHHHHHHhc
Confidence 99999874 4578889999999886 2 445699999999885
No 101
>PF14788 EF-hand_10: EF hand; PDB: 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B 1DJZ_B 1DJY_B 1DJX_B 1QAT_A 1DJH_A ....
Probab=95.79 E-value=0.027 Score=43.09 Aligned_cols=34 Identities=26% Similarity=0.438 Sum_probs=22.6
Q ss_pred CCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHH
Q psy14118 635 GGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKD 668 (766)
Q Consensus 635 ~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~ 668 (766)
..++++.+..+|+..|.+++|+|+.+||..++..
T Consensus 16 I~~~~~yA~~LFq~~D~s~~g~Le~~Ef~~Fy~~ 49 (51)
T PF14788_consen 16 IEMDDEYARQLFQECDKSQSGRLEGEEFEEFYKR 49 (51)
T ss_dssp ----HHHHHHHHHHH-SSSSSEBEHHHHHHHHHH
T ss_pred cCcCHHHHHHHHHHhcccCCCCccHHHHHHHHHH
Confidence 4567777788888888888888888888777654
No 102
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=95.75 E-value=0.0033 Score=57.32 Aligned_cols=59 Identities=22% Similarity=0.316 Sum_probs=39.8
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMC 730 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~ 730 (766)
..+.-.|..+|.|+||.|+..||+.+...+ ...+.-+..+++..| |+||.||+.|+..+
T Consensus 54 ~~~~W~F~~LD~n~d~~L~~~El~~l~~~l--~~~e~C~~~F~~~CD~n~d~~Is~~EW~~C 113 (113)
T PF10591_consen 54 RVVHWKFCQLDRNKDGVLDRSELKPLRRPL--MPPEHCARPFFRSCDVNKDGKISLDEWCNC 113 (113)
T ss_dssp HHHHHHHHHH--T-SSEE-TTTTGGGGSTT--STTGGGHHHHHHHH-TT-SSSEEHHHHHHH
T ss_pred hhhhhhHhhhcCCCCCccCHHHHHHHHHHH--hhhHHHHHHHHHHcCCCCCCCCCHHHHccC
Confidence 456777999999999999999987765433 334455777888888 89999999988754
No 103
>PF13405 EF-hand_6: EF-hand domain; PDB: 2AMI_A 3QRX_A 1W7J_B 1OE9_B 1W7I_B 1KFU_S 1KFX_S 2BL0_B 1Y1X_B 3MSE_B ....
Probab=95.53 E-value=0.016 Score=39.63 Aligned_cols=27 Identities=30% Similarity=0.524 Sum_probs=23.9
Q ss_pred HHHHHHHhhcCCCCccccHHHHHHHHH
Q psy14118 641 VCRSMVAMLDVDRSGKLGFEEFQQLWK 667 (766)
Q Consensus 641 ~i~~l~~~~D~d~~G~I~~~EF~~~~~ 667 (766)
+++.+|+.+|.|++|.|+++||..++.
T Consensus 1 ~l~~~F~~~D~d~dG~I~~~el~~~l~ 27 (31)
T PF13405_consen 1 RLREAFKMFDKDGDGFIDFEELRAILR 27 (31)
T ss_dssp HHHHHHHHH-TTSSSEEEHHHHHHHHH
T ss_pred CHHHHHHHHCCCCCCcCcHHHHHHHHH
Confidence 467899999999999999999999887
No 104
>KOG0046|consensus
Probab=95.45 E-value=0.04 Score=61.20 Aligned_cols=74 Identities=23% Similarity=0.394 Sum_probs=62.5
Q ss_pred cchhhHHHHHHHHHHHcCCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhc
Q psy14118 536 EKEKKTEAIRQFFQKLAGDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICG 615 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (766)
-+.++...+++-|.++|+++|.|+..||..++.+...
T Consensus 13 ~tq~El~~l~~kF~~~d~~~G~v~~~~l~~~f~k~~~------------------------------------------- 49 (627)
T KOG0046|consen 13 LTQEELRELKEKFNKLDDQKGYVTVYELPDAFKKAKL------------------------------------------- 49 (627)
T ss_pred ccHHHHHHHHHHHHhhcCCCCeeehHHhHHHHHHhcc-------------------------------------------
Confidence 3567778899999999999999999999999987611
Q ss_pred cccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 616 NACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 616 ~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
....+..++++.++...+.|.+|+|+|+||+.++..+
T Consensus 50 -----------------~~g~~~~eei~~~l~~~~~~~~g~v~fe~f~~~~~~l 86 (627)
T KOG0046|consen 50 -----------------PLGYFVREEIKEILGEVGVDADGRVEFEEFVGIFLNL 86 (627)
T ss_pred -----------------cccchhHHHHHHHHhccCCCcCCccCHHHHHHHHHhh
Confidence 1234668999999999999999999999999977654
No 105
>KOG4065|consensus
Probab=95.29 E-value=0.042 Score=48.88 Aligned_cols=57 Identities=25% Similarity=0.369 Sum_probs=41.4
Q ss_pred HHhhhhcCCCCcccCHHHHHHHHHHh------CC----CCCHHHHHHHHHH----cc-CCCCcccHHHHHHH
Q psy14118 674 SVFKMYDQENSGYLSPFELRQALTSA------GY----HLNNHILNILAHR----YS-GRDARISFDDFMMC 730 (766)
Q Consensus 674 ~~F~~~D~d~~G~Is~~El~~~L~~~------g~----~ls~~~~~~l~~~----~d-d~dG~Is~~EF~~~ 730 (766)
..|+..|.|++|+|+--||.+++... |. -.++.+++.|+.. .| |+||.|+|-||++.
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~H~~h~~ghep~Pl~sE~Ele~~iD~vL~DdDfN~DG~IDYgEflK~ 142 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHTHDAHDSGHEPVPLSSEAELERLIDAVLDDDDFNGDGVIDYGEFLKR 142 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHHhhhhhcCCCCCCCCCHHHHHHHHHHHhcccccCCCceeeHHHHHhh
Confidence 45788888888888888888777643 21 2456666666554 45 89999999999864
No 106
>KOG4666|consensus
Probab=95.10 E-value=0.1 Score=54.78 Aligned_cols=92 Identities=14% Similarity=0.142 Sum_probs=72.9
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHh-CCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHH-----HHHHHHHh
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSA-GYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRL-----KTMIDLFK 742 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~-g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l-----~~~~~~F~ 742 (766)
+.++..|.+||.+++|.++..|-...+.-+ |...+.+.++..+++|+ +.||.+.-.+|-.++... -.+...|.
T Consensus 259 d~l~~~f~LFde~~tg~~D~re~v~~lavlc~p~~t~~iiq~afk~f~v~eDg~~ge~~ls~ilq~~lgv~~l~v~~lf~ 338 (412)
T KOG4666|consen 259 DKLAPTFMLFDEGTTGNGDYRETVKTLAVLCGPPVTPVIIQYAFKRFSVAEDGISGEHILSLILQVVLGVEVLRVPVLFP 338 (412)
T ss_pred hhhhhhhheecCCCCCcccHHHHhhhheeeeCCCCcHHHHHHHHHhcccccccccchHHHHHHHHHhcCcceeeccccch
Confidence 568999999999999999998887777654 56788999999999999 999999987776555321 13445799
Q ss_pred ccCCCCCceEEeCHHHHHHHH
Q psy14118 743 ARDPSSTNKATFTLEEWVENT 763 (766)
Q Consensus 743 ~~D~d~~G~I~lt~~ef~~~~ 763 (766)
.++...+|.| ++.+|-.++
T Consensus 339 ~i~q~d~~ki--~~~~f~~fa 357 (412)
T KOG4666|consen 339 SIEQKDDPKI--YASNFRKFA 357 (412)
T ss_pred hhhcccCcce--eHHHHHHHH
Confidence 9999999955 777776543
No 107
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=93.85 E-value=0.062 Score=34.62 Aligned_cols=26 Identities=23% Similarity=0.544 Sum_probs=13.9
Q ss_pred HHHHhhhhcCCCCcccCHHHHHHHHH
Q psy14118 672 WKSVFKMYDQENSGYLSPFELRQALT 697 (766)
Q Consensus 672 l~~~F~~~D~d~~G~Is~~El~~~L~ 697 (766)
++.+|+.+|.+++|.|+..||..+++
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~ 27 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLK 27 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHH
Confidence 34455555555555555555555543
No 108
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=93.40 E-value=0.17 Score=43.21 Aligned_cols=61 Identities=15% Similarity=0.386 Sum_probs=51.2
Q ss_pred HHHHHhhhhcCCCCcccCHHHHHHHHHHhC-C-CCCHHHHHHHHHHcc-C----CCCcccHHHHHHHHH
Q psy14118 671 NWKSVFKMYDQENSGYLSPFELRQALTSAG-Y-HLNNHILNILAHRYS-G----RDARISFDDFMMCAV 732 (766)
Q Consensus 671 ~l~~~F~~~D~d~~G~Is~~El~~~L~~~g-~-~ls~~~~~~l~~~~d-d----~dG~Is~~EF~~~l~ 732 (766)
+++.+|..+-. +.+.|+.++|..+|.... . .++.+.+..++.++. + ..+.+++++|..+|.
T Consensus 1 ei~~if~~ys~-~~~~mt~~~f~~FL~~eQ~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 1 EIEEIFRKYSS-DKEYMTAEEFRRFLREEQGEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLF 68 (83)
T ss_dssp HHHHHHHHHCT-TSSSEEHHHHHHHHHHTSS-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHH
T ss_pred CHHHHHHHHhC-CCCcCCHHHHHHHHHHHhccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHC
Confidence 46789999965 799999999999998763 3 578999999999986 3 578999999999875
No 109
>smart00054 EFh EF-hand, calcium binding motif. EF-hands are calcium-binding motifs that occur at least in pairs. Links between disease states and genes encoding EF-hands, particularly the S100 subclass, are emerging. Each motif consists of a 12 residue loop flanked on either side by a 12 residue alpha-helix. EF-hands undergo a conformational change unpon binding calcium ions.
Probab=92.84 E-value=0.099 Score=33.61 Aligned_cols=27 Identities=37% Similarity=0.676 Sum_probs=24.2
Q ss_pred HHHHHHhhcCCCCccccHHHHHHHHHH
Q psy14118 642 CRSMVAMLDVDRSGKLGFEEFQQLWKD 668 (766)
Q Consensus 642 i~~l~~~~D~d~~G~I~~~EF~~~~~~ 668 (766)
++.+|+.+|.+++|.|++.||..++..
T Consensus 2 ~~~~f~~~d~~~~g~i~~~e~~~~~~~ 28 (29)
T smart00054 2 LKEAFRLFDKDGDGKIDFEEFKDLLKA 28 (29)
T ss_pred HHHHHHHHCCCCCCcEeHHHHHHHHHh
Confidence 578999999999999999999988764
No 110
>cd00044 CysPc Calpains, domains IIa, IIb; calcium-dependent cytoplasmic cysteine proteinases, papain-like. Functions in cytoskeletal remodeling processes, cell differentiation, apoptosis and signal transduction.
Probab=92.70 E-value=0.088 Score=57.19 Aligned_cols=47 Identities=47% Similarity=0.885 Sum_probs=35.2
Q ss_pred ccCCCCCcccccCchhhhhcCccccCCCceeeecccccccccceEEee
Q psy14118 296 VTAGGSQEWRFIPDHEKRELGLTFDDDGEFWMSYKDFLKYFSRLEICN 343 (766)
Q Consensus 296 ~~~~~~~~W~ll~rh~~~~lg~~~~~~g~~~~~~~d~~~~~~~i~~~~ 343 (766)
..++.++.|- .....+.......++||.|||+|+||+++|+.+.+|+
T Consensus 269 ~ws~~~~~w~-~~~~~~~~~~~~~~~dG~Fwm~~~df~~~F~~~~vc~ 315 (315)
T cd00044 269 GWSDDSSEWW-VIDAERKKLLLSGKDDGEFWMSFEDFLRNFDGLYVCN 315 (315)
T ss_pred CCCCCCchhc-cChHHHHHhcCCCCCCCEEEEEhHHhheeeCeEEEeC
Confidence 3455667776 2233334455678899999999999999999999984
No 111
>PF09279 EF-hand_like: Phosphoinositide-specific phospholipase C, efhand-like; InterPro: IPR015359 This domain is predominantly found in the enzyme phosphoinositol-specific phospholipase C. It adopts a structure consisting of a core of four alpha helices, in an EF like fold, and is required for functioning of the enzyme []. ; PDB: 3OHM_B 3QR0_A 2ZKM_X 2FJU_B 3QR1_D 1DJW_B 1DJI_B 1DJG_B 1QAS_B 2ISD_B ....
Probab=92.56 E-value=0.27 Score=42.04 Aligned_cols=64 Identities=19% Similarity=0.367 Sum_probs=51.1
Q ss_pred HHHHHHHHHcCCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccCCCC
Q psy14118 543 AIRQFFQKLAGDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACRDTP 622 (766)
Q Consensus 543 ~~r~~F~~~d~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 622 (766)
.++.+|.+++++.+.++.++|++.|+..-
T Consensus 1 ei~~if~~ys~~~~~mt~~~f~~FL~~eQ--------------------------------------------------- 29 (83)
T PF09279_consen 1 EIEEIFRKYSSDKEYMTAEEFRRFLREEQ--------------------------------------------------- 29 (83)
T ss_dssp HHHHHHHHHCTTSSSEEHHHHHHHHHHTS---------------------------------------------------
T ss_pred CHHHHHHHHhCCCCcCCHHHHHHHHHHHh---------------------------------------------------
Confidence 36789999987789999999999998750
Q ss_pred ccccccccccCCCCCCHHHHHHHHHhhcCC----CCccccHHHHHHHHH
Q psy14118 623 LGAALETKTTTEGGFSKDVCRSMVAMLDVD----RSGKLGFEEFQQLWK 667 (766)
Q Consensus 623 l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d----~~G~I~~~EF~~~~~ 667 (766)
.....+.+++..+|..+..+ ..+.|++++|..++.
T Consensus 30 ----------~~~~~~~~~~~~li~~~~~~~~~~~~~~lt~~gF~~fL~ 68 (83)
T PF09279_consen 30 ----------GEPRLTDEQAKELIEKFEPDERNRQKGQLTLEGFTRFLF 68 (83)
T ss_dssp ----------S-TTSSHHHHHHHHHHHHHHHHHHCTTEEEHHHHHHHHH
T ss_pred ----------ccccCcHHHHHHHHHHHccchhhcccCCcCHHHHHHHHC
Confidence 12245789999999998654 468899999988775
No 112
>PF10591 SPARC_Ca_bdg: Secreted protein acidic and rich in cysteine Ca binding region; InterPro: IPR019577 This entry represents the calcium-binding domain found in SPARC (Secreted Protein Acidic and Rich in Cysteine) and Testican (also known as SPOCK; or SParc/Osteonectin, Cwcv and Kazal-like domains) proteins. SPARC proteins are down-regulated in various tumours and may have a tumour-suppressor function [, ]. Testican-3 appears to be a novel regulator that reduces the activity of matrix metalloproteinase (MMP) in adult T-cell leukemia (ATL) []. This cysteine-rich domain is responsible for the anti-spreading activity of human urothelial cells. This extracellular calcium-binding domain is rich in alpha-helices and contains two EF-hands that each coordinates one Ca2+ ion, forming a helix-loop-helix structure that not only drives the conformation of the protein but is also necessary for biological activity. The anti-spreading activity was dependent on the coordination of Ca2+ by a Glu residue at the Z position of EF-hand 2 []. ; GO: 0005509 calcium ion binding, 0007165 signal transduction, 0005578 proteinaceous extracellular matrix; PDB: 1BMO_A 1SRA_A 2V53_A 1NUB_B.
Probab=92.56 E-value=0.048 Score=49.74 Aligned_cols=58 Identities=22% Similarity=0.265 Sum_probs=43.1
Q ss_pred CCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH----HHHHHHhhhhcCCCCcccCHHHHHH
Q psy14118 637 FSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI----RNWKSVFKMYDQENSGYLSPFELRQ 694 (766)
Q Consensus 637 ~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~----~~l~~~F~~~D~d~~G~Is~~El~~ 694 (766)
.-...+.-.|..+|.|+||.|+-.|...+...+ ..++..|+..|.|+||.|+..|...
T Consensus 51 ~~~~~~~W~F~~LD~n~d~~L~~~El~~l~~~l~~~e~C~~~F~~~CD~n~d~~Is~~EW~~ 112 (113)
T PF10591_consen 51 ECKRVVHWKFCQLDRNKDGVLDRSELKPLRRPLMPPEHCARPFFRSCDVNKDGKISLDEWCN 112 (113)
T ss_dssp GGHHHHHHHHHHH--T-SSEE-TTTTGGGGSTTSTTGGGHHHHHHHH-TT-SSSEEHHHHHH
T ss_pred hhhhhhhhhHhhhcCCCCCccCHHHHHHHHHHHhhhHHHHHHHHHHcCCCCCCCCCHHHHcc
Confidence 345678889999999999999999988876633 4578899999999999999999754
No 113
>KOG0169|consensus
Probab=91.90 E-value=1.5 Score=51.66 Aligned_cols=122 Identities=17% Similarity=0.253 Sum_probs=90.1
Q ss_pred CCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH------HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHH
Q psy14118 637 FSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI------RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNI 710 (766)
Q Consensus 637 ~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~ 710 (766)
..+.-+..+|...|.+++|.+++.+-..++..+ ..++.+|+..|..+++.+...++.++...+.... ++..
T Consensus 133 ~~~~wi~~~~~~ad~~~~~~~~~~~~~~~~~~~n~~l~~~~~~~~f~e~~~~~~~k~~~~~~~~~~~~~~~rp---ev~~ 209 (746)
T KOG0169|consen 133 RREHWIHSIFQEADKNKNGHMSFDEVLDLLKQLNVQLSESKARRLFKESDNSQTGKLEEEEFVKFRKELTKRP---EVYF 209 (746)
T ss_pred hHHHHHHHHHHHHccccccccchhhHHHHHHHHHHhhhHHHHHHHHHHHHhhccceehHHHHHHHHHhhccCc---hHHH
Confidence 344567889999999999999999988888765 4578889999999999999999999888776443 7778
Q ss_pred HHHHccCCCCcccHHHHHHHHHHH-----------HHHHHHHhccCC-CCCceEEeCHHHHHHHH
Q psy14118 711 LAHRYSGRDARISFDDFMMCAVRL-----------KTMIDLFKARDP-SSTNKATFTLEEWVENT 763 (766)
Q Consensus 711 l~~~~dd~dG~Is~~EF~~~l~~l-----------~~~~~~F~~~D~-d~~G~I~lt~~ef~~~~ 763 (766)
++..+.++.+.++.++++.++... +.+++.|+.... ...+ .++++.|....
T Consensus 210 ~f~~~s~~~~~ls~~~L~~Fl~~~q~e~~~~~~~ae~ii~~~e~~k~~~~~~--~l~ldgF~~yL 272 (746)
T KOG0169|consen 210 LFVQYSHGKEYLSTDDLLRFLEEEQGEDGATLDEAEEIIERYEPSKEFRRHG--LLSLDGFTRYL 272 (746)
T ss_pred HHHHHhCCCCccCHHHHHHHHHHhcccccccHHHHHHHHHHhhhhhhccccc--eecHHHHHHHh
Confidence 888887558889998888877533 233333433222 2333 46888887654
No 114
>KOG4065|consensus
Probab=91.74 E-value=0.53 Score=42.12 Aligned_cols=25 Identities=16% Similarity=0.242 Sum_probs=21.9
Q ss_pred HHHHHHc-CCCcccCHHHHHHHHHHH
Q psy14118 546 QFFQKLA-GDDMEVDWMELKDILDYA 570 (766)
Q Consensus 546 ~~F~~~d-~~~g~i~~~el~~~l~~~ 570 (766)
..|..-| |+++.||--||.++++..
T Consensus 71 HYF~MHDldknn~lDGiEl~kAiTH~ 96 (144)
T KOG4065|consen 71 HYFSMHDLDKNNFLDGIELLKAITHT 96 (144)
T ss_pred hhhhhhccCcCCcchHHHHHHHHHHH
Confidence 5677778 999999999999999875
No 115
>KOG1707|consensus
Probab=90.33 E-value=1.8 Score=49.62 Aligned_cols=58 Identities=22% Similarity=0.318 Sum_probs=42.2
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCC----CHHHHHHHHHHccCCCCcccHHHHHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHL----NNHILNILAHRYSGRDARISFDDFMMCAV 732 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~l----s~~~~~~l~~~~dd~dG~Is~~EF~~~l~ 732 (766)
+.+..+|..||.|+||-++..||..++...+... ...+.-.. +..|.++|+-|+....
T Consensus 315 ~Fl~~~f~~~D~d~Dg~L~p~El~~LF~~~P~~pW~~~~~~~~t~~-----~~~G~ltl~g~l~~Ws 376 (625)
T KOG1707|consen 315 RFLVDVFEKFDRDNDGALSPEELKDLFSTAPGSPWTSSPYKDSTVK-----NERGWLTLNGFLSQWS 376 (625)
T ss_pred HHHHHHHHhccCCCCCCcCHHHHHHHhhhCCCCCCCCCccccccee-----cccceeehhhHHHHHH
Confidence 4689999999999999999999999998874322 11110000 4678999999987543
No 116
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=88.51 E-value=2.7 Score=40.86 Aligned_cols=61 Identities=16% Similarity=0.155 Sum_probs=35.9
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCC-------CCHHHHHHHHHHccCCCCcccHHHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSAGYH-------LNNHILNILAHRYSGRDARISFDDFMMC 730 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~-------ls~~~~~~l~~~~dd~dG~Is~~EF~~~ 730 (766)
+.+.++|..+++.+.+.|+..|+..+++.--.. -+.-|...+....-+.||.+..|+-..+
T Consensus 96 ~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~~d~dG~l~Ke~iR~v 163 (174)
T PF05042_consen 96 QKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILAKDKDGFLSKEDIRGV 163 (174)
T ss_pred HHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHHcCcCCcEeHHHHhhh
Confidence 467888888887777788888887777652111 1222233333333366777776664443
No 117
>PF05042 Caleosin: Caleosin related protein; InterPro: IPR007736 This family contains plant proteins related to caleosin. Caleosins contain calcium-binding domains and have an oleosin-like association with lipid bodies. Caleosins are present at relatively low levels and are mainly bound to microsomal membrane fractions at the early stages of seed development. As the seeds mature, overall levels of caleosins increased dramatically and they were associated almost exclusively with storage lipid bodies []. The calcium binding domain is probably related to the calcium-binding EF-hands motif IPR002048 from INTERPRO.
Probab=87.13 E-value=7.5 Score=37.89 Aligned_cols=61 Identities=16% Similarity=0.368 Sum_probs=51.4
Q ss_pred CCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-------------HHHHHHhhhhcCCCCcccCHHHHHHHH
Q psy14118 635 GGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-------------RNWKSVFKMYDQENSGYLSPFELRQAL 696 (766)
Q Consensus 635 ~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-------------~~l~~~F~~~D~d~~G~Is~~El~~~L 696 (766)
..+.++..++||+.++..+.+.|++.|...++..- -+|..++.+. +|++|.+..++++.+.
T Consensus 91 GrFvp~kFe~iF~kya~~~~d~LT~~E~~~m~~~nr~~~D~~GW~a~~~EW~~~y~L~-~d~dG~l~Ke~iR~vY 164 (174)
T PF05042_consen 91 GRFVPQKFEEIFSKYAKTGPDALTLRELWRMLKGNRNANDPFGWFAAFFEWGALYILA-KDKDGFLSKEDIRGVY 164 (174)
T ss_pred CcCCHHHHHHHHHHhCCCCCCCcCHHHHHHHHHhccccCCcchhhhhhhHHHHHHHHH-cCcCCcEeHHHHhhhc
Confidence 45788999999999999888999999999988752 4678888776 5678999999998764
No 118
>PLN02952 phosphoinositide phospholipase C
Probab=86.89 E-value=2.6 Score=49.32 Aligned_cols=79 Identities=16% Similarity=0.221 Sum_probs=60.1
Q ss_pred CCccccHHHHHHHHHHH--------HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCC--CCCHHHHHHHHHHcc------
Q psy14118 653 RSGKLGFEEFQQLWKDI--------RNWKSVFKMYDQENSGYLSPFELRQALTSAGY--HLNNHILNILAHRYS------ 716 (766)
Q Consensus 653 ~~G~I~~~EF~~~~~~~--------~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~--~ls~~~~~~l~~~~d------ 716 (766)
+.|.++|+||..+...+ .++..+|..+-.+ .+.|+.++|..+|..... ..+.+.++.++..+-
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~-~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~ 91 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVG-GGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHV 91 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCC-CCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhcccc
Confidence 35899999998877665 4899999999654 478999999999998642 366777777765442
Q ss_pred --CCCCcccHHHHHHHHH
Q psy14118 717 --GRDARISFDDFMMCAV 732 (766)
Q Consensus 717 --d~dG~Is~~EF~~~l~ 732 (766)
.+.+.++++.|..++.
T Consensus 92 ~~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 92 TRYTRHGLNLDDFFHFLL 109 (599)
T ss_pred ccccccCcCHHHHHHHHc
Confidence 1234589999999886
No 119
>KOG1955|consensus
Probab=85.48 E-value=1.5 Score=48.67 Aligned_cols=68 Identities=16% Similarity=0.189 Sum_probs=57.6
Q ss_pred cchhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 536 EKEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
-++++++.+-..|+.+. |-+|.|+-..-++++++.
T Consensus 225 IT~EQReYYvnQFrtvQpDp~gfisGsaAknFFtKS-------------------------------------------- 260 (737)
T KOG1955|consen 225 ITPEQREYYVNQFRTVQPDPHGFISGSAAKNFFTKS-------------------------------------------- 260 (737)
T ss_pred cCHHHHHHHHhhhhcccCCcccccccHHHHhhhhhc--------------------------------------------
Confidence 46888999999999997 889999977766666542
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHH
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKD 668 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~ 668 (766)
.+..+++..|+++.|.|.||.|++.||++.+..
T Consensus 261 ---------------------klpi~ELshIWeLsD~d~DGALtL~EFcAAfHL 293 (737)
T KOG1955|consen 261 ---------------------KLPIEELSHIWELSDVDRDGALTLSEFCAAFHL 293 (737)
T ss_pred ---------------------cCchHHHHHHHhhcccCccccccHHHHHhhHhh
Confidence 456689999999999999999999999998865
No 120
>KOG3555|consensus
Probab=84.20 E-value=1.7 Score=46.27 Aligned_cols=66 Identities=21% Similarity=0.142 Sum_probs=55.5
Q ss_pred CCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH--HHHHHHhhhhcCCCCcccCHHHHHHHHHHhC
Q psy14118 635 GGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI--RNWKSVFKMYDQENSGYLSPFELRQALTSAG 700 (766)
Q Consensus 635 ~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~--~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g 700 (766)
.++-+.++.-||+.+|.|.|+.|+..|...+.... ..++..|...|...||.|+..|.-..+..-+
T Consensus 245 ~p~CKds~gWMFnklD~N~Dl~Ld~sEl~~I~ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k~~ 312 (434)
T KOG3555|consen 245 LPICKDSLGWMFNKLDTNYDLLLDQSELRAIELDKNEACIKPFFNSCDTYKDGSISTNEWCYCFQKSD 312 (434)
T ss_pred CcchhhhhhhhhhccccccccccCHHHhhhhhccCchhHHHHHHhhhcccccCccccchhhhhhccCC
Confidence 34557888999999999999999999998877653 5689999999999999999999877766544
No 121
>cd02619 Peptidase_C1 C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed of two subfamilies of cysteine peptidases (CPs), C1A (papain) and C1B (bleomycin hydrolase). Papain-like enzymes are mostly endopeptidases with some exceptions like cathepsins B, C, H and X, which are exopeptidases. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds while mammalian CPs are primarily lysosomal enzymes responsible for protein degradation in the lysosome. Papain-like CPs are synthesized as inactive proenzymes with N-terminal propeptide regions, which are removed upon activation. Bleomycin hydrolase (BH) is a CP that detoxifies bleomycin by hydrolysis of an amide group. It acts as a carboxypeptidase on its C-terminus to convert itself into an aminopeptidase and peptide ligase. BH is found in all tissues in mammals as well as in many other eukaryotes. It forms a hexameric ring barrel str
Probab=83.90 E-value=3 Score=42.22 Aligned_cols=52 Identities=27% Similarity=0.443 Sum_probs=39.0
Q ss_pred CCCCCCceeEEeeEEEecccCCCCCCceeEEEEeCCCCCCCcccccCCCCCccCCCCCHHHHHHhCCccCCCCeEEEeHh
Q psy14118 172 QGLVKGHAYSITRIKYVDISTPNTSGKIPLIRMRNPWGNEAEWNGAWSDKSQEWRFIPDHEKRELGLTFDDDGEFWMSYK 251 (766)
Q Consensus 172 ~GL~~~haYsv~~v~~~~~~~~~~~~~~~ll~lrNPWg~~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~Fwm~~~ 251 (766)
.....+||-.|++...- .. .+.....+||.|| +.| .++|-|||+++
T Consensus 167 ~~~~~~Hav~ivGy~~~----~~--~~~~~~i~~NSwG-------------~~w---------------g~~Gy~~i~~~ 212 (223)
T cd02619 167 DGDLGGHAVVIVGYDDN----YV--EGKGAFIVKNSWG-------------TDW---------------GDNGYGRISYE 212 (223)
T ss_pred CCccCCeEEEEEeecCC----CC--CCCCEEEEEeCCC-------------Ccc---------------ccCCEEEEehh
Confidence 34567999999999762 00 2567899999999 233 26899999999
Q ss_pred HHHhhc
Q psy14118 252 DFLKYF 257 (766)
Q Consensus 252 df~~~F 257 (766)
++..++
T Consensus 213 ~~~~~~ 218 (223)
T cd02619 213 DVYEMT 218 (223)
T ss_pred hhhhhh
Confidence 998554
No 122
>KOG2243|consensus
Probab=83.73 E-value=2.3 Score=52.07 Aligned_cols=58 Identities=19% Similarity=0.376 Sum_probs=50.2
Q ss_pred HHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHH
Q psy14118 673 KSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCA 731 (766)
Q Consensus 673 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l 731 (766)
...|+.||.|+.|.|+..||.++|... ...+..+++.++.... |.+..++|++|+.-+
T Consensus 4060 sdtfkeydpdgkgiiskkdf~kame~~-k~ytqse~dfllscae~dend~~~y~dfv~rf 4118 (5019)
T KOG2243|consen 4060 SDTFKEYDPDGKGIISKKDFHKAMEGH-KHYTQSEIDFLLSCAEADENDMFDYEDFVDRF 4118 (5019)
T ss_pred cccchhcCCCCCccccHHHHHHHHhcc-ccchhHHHHHHHHhhccCccccccHHHHHHHh
Confidence 467999999999999999999998753 4578889999999888 888899999998654
No 123
>KOG0042|consensus
Probab=83.12 E-value=2.2 Score=48.61 Aligned_cols=66 Identities=14% Similarity=0.212 Sum_probs=59.6
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLK 735 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~ 735 (766)
...+..|..+|.|+.|+++..++.++|++.+...+++.+.+++...+ +-.|.+...||..++..+.
T Consensus 593 ~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~~ 659 (680)
T KOG0042|consen 593 LRRKTRFAFLDADKKAYQAIADVLKVLKSENVGWDEDRLHEELQEADENLNGFVELREFLQLMSAIK 659 (680)
T ss_pred HHHHHHHHhhcchHHHHHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHHh
Confidence 45678899999999999999999999999998999999999999999 7799999999999886543
No 124
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=79.63 E-value=7.2 Score=37.62 Aligned_cols=62 Identities=18% Similarity=0.385 Sum_probs=47.6
Q ss_pred HHHhhhh---cCCCCcccCHHHHHHHHHHhCC---CCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHH
Q psy14118 673 KSVFKMY---DQENSGYLSPFELRQALTSAGY---HLNNHILNILAHRYS-GRDARISFDDFMMCAVRL 734 (766)
Q Consensus 673 ~~~F~~~---D~d~~G~Is~~El~~~L~~~g~---~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l 734 (766)
+.+|..| -......|+...|.+++++.++ .++...++.+|.++- .+..+|+|++|+.+|..+
T Consensus 2 ~~~F~~f~~fG~~~~~~m~~~~F~Kl~kD~~i~d~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 2 EAVFKAFASFGKKNGTEMDSKNFAKLCKDCGIIDKKLTSTDVDIIFSKVKAKGARKITFEQFLEALAEL 70 (154)
T ss_dssp HHHHHHHHCSSTSTSSEEEHHHHHHHHHHTSS--SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCccccccHHHHHHHHHHcCCCCCCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 4455555 4566778999999999999753 589999999999987 666779999999988644
No 125
>PF05517 p25-alpha: p25-alpha ; InterPro: IPR008907 This family encodes a 25 kDa protein that is phosphorylated by a Ser/Thr-Pro kinase []. It has been described as a brain specific protein, but it is found in Tetrahymena thermophila.; PDB: 1WLM_A 1PUL_A 2JRF_A.
Probab=79.14 E-value=7.2 Score=37.63 Aligned_cols=35 Identities=11% Similarity=0.270 Sum_probs=27.1
Q ss_pred CCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 635 GGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 635 ~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
..++...+..+|..+-..+..+|+|++|+.++..+
T Consensus 36 ~k~t~tdvDiiF~Kvk~k~~~~I~f~~F~~aL~~l 70 (154)
T PF05517_consen 36 KKLTSTDVDIIFSKVKAKGARKITFEQFLEALAEL 70 (154)
T ss_dssp SSS-HHHHHHHHHHHT-SS-SEEEHHHHHHHHHHH
T ss_pred CCCchHHHHHHHHHhhcCCCcccCHHHHHHHHHHH
Confidence 34888999999999876677789999999988755
No 126
>KOG0035|consensus
Probab=78.84 E-value=13 Score=45.11 Aligned_cols=99 Identities=16% Similarity=0.040 Sum_probs=75.6
Q ss_pred chhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhc
Q psy14118 537 KEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICG 615 (766)
Q Consensus 537 ~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 615 (766)
+......++.+|+..+ .+.|..+.+++.+.|...+.+..
T Consensus 742 sQ~v~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e---------------------------------------- 781 (890)
T KOG0035|consen 742 SQYVLDELRALENEQDKIDGGAASPEELLRCLMSLGYNTE---------------------------------------- 781 (890)
T ss_pred hHHHHHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccc----------------------------------------
Confidence 4567789999999998 67788999999999987632210
Q ss_pred cccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCcccC
Q psy14118 616 NACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYLS 688 (766)
Q Consensus 616 ~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~Is 688 (766)
...--..++..+++..|.+..|.++|.+|...+.+- ..+..+|+..-+++. +|.
T Consensus 782 ------------------~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R~~e~l~~~~r~i~s~~d~~ktk~-~lL 842 (890)
T KOG0035|consen 782 ------------------EEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLEREYEDLDTELRAILAFEDWAKTKA-YLL 842 (890)
T ss_pred ------------------hhHHHHHHHHHHHhccCcccccceeHHHHHhHhhhhhhhhcHHHHHHHHHHHHHcchh-HHH
Confidence 011224567778888888888999999999988763 467778888877766 788
Q ss_pred HHHHHH
Q psy14118 689 PFELRQ 694 (766)
Q Consensus 689 ~~El~~ 694 (766)
.+||..
T Consensus 843 ~eEL~~ 848 (890)
T KOG0035|consen 843 LEELVR 848 (890)
T ss_pred HHHHHh
Confidence 888876
No 127
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=78.76 E-value=1 Score=37.05 Aligned_cols=53 Identities=17% Similarity=0.340 Sum_probs=39.2
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc---CCC-----CcccHHHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS---GRD-----ARISFDDFMMC 730 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d---d~d-----G~Is~~EF~~~ 730 (766)
+++..+|+.+ .++.++|+.+||+..| +.+.++.+++++. +.+ |.++|..|+..
T Consensus 6 eqv~~aFr~l-A~~KpyVT~~dLr~~l-------~pe~aey~~~~Mp~~~~~~~~~~~~~~DY~~f~~~ 66 (69)
T PF08726_consen 6 EQVEEAFRAL-AGGKPYVTEEDLRRSL-------TPEQAEYCISRMPPYEGPDGDAIPGAYDYESFTNS 66 (69)
T ss_dssp HHHHHHHHHH-CTSSSCEEHHHHHHHS--------CCCHHHHHCCSEC--SSS----TTEEECHHHHCC
T ss_pred HHHHHHHHHH-HcCCCcccHHHHHHHc-------CcHHHHHHHHHCcccCCCCcCCCCCCcCHHHHHHH
Confidence 5788999999 7788999999999886 3334466777664 222 67899988753
No 128
>KOG3555|consensus
Probab=77.16 E-value=2.9 Score=44.63 Aligned_cols=60 Identities=18% Similarity=0.236 Sum_probs=51.5
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVR 733 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~ 733 (766)
..+.-+|..+|.|.||.|+..||+.+- ..-.+.-++.+|...| ..||.|+-.|+..++.+
T Consensus 250 ds~gWMFnklD~N~Dl~Ld~sEl~~I~----ldknE~CikpFfnsCD~~kDg~iS~~EWC~CF~k 310 (434)
T KOG3555|consen 250 DSLGWMFNKLDTNYDLLLDQSELRAIE----LDKNEACIKPFFNSCDTYKDGSISTNEWCYCFQK 310 (434)
T ss_pred hhhhhhhhccccccccccCHHHhhhhh----ccCchhHHHHHHhhhcccccCccccchhhhhhcc
Confidence 667889999999999999999998753 3346677899999999 89999999999988753
No 129
>KOG0998|consensus
Probab=76.43 E-value=2.7 Score=51.71 Aligned_cols=60 Identities=20% Similarity=0.318 Sum_probs=41.9
Q ss_pred HHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHH
Q psy14118 671 NWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAV 732 (766)
Q Consensus 671 ~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~ 732 (766)
.+..+|...|.+.+|+|+..+.+..+.. ..++...++.+....| .+.|.|++++|.-.|.
T Consensus 284 ~~~~if~q~d~~~dG~I~s~~~~~~f~~--~gl~~~~l~~~w~l~d~~n~~~ls~~ef~~~~~ 344 (847)
T KOG0998|consen 284 KYSKIFSQVDKDNDGSISSNEARNIFLP--FGLSKPRLAHVWLLADTQNTGTLSKDEFALAMH 344 (847)
T ss_pred HHHHHHHhccccCCCccccccccccccc--CCCChhhhhhhhhhcchhccCcccccccchhhh
Confidence 3456677777777777777777777655 4466667777777777 7777777777765554
No 130
>KOG4578|consensus
Probab=74.94 E-value=2.2 Score=45.08 Aligned_cols=58 Identities=19% Similarity=0.210 Sum_probs=41.2
Q ss_pred HHHHHHHhhcCCCCccccHHHH---HHHHHHH----HHHHHHhhhhcCCCCcccCHHHHHHHHHH
Q psy14118 641 VCRSMVAMLDVDRSGKLGFEEF---QQLWKDI----RNWKSVFKMYDQENSGYLSPFELRQALTS 698 (766)
Q Consensus 641 ~i~~l~~~~D~d~~G~I~~~EF---~~~~~~~----~~l~~~F~~~D~d~~G~Is~~El~~~L~~ 698 (766)
.+.-.|..+|.|.++.|+-.|. ..++... +..+..|+..|.|+|.+|+..|++..|..
T Consensus 334 vv~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 334 VVHWYFNQLDKNSNNDIERREWKPFKRVLLKKSKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred eeeeeeeeecccccCccchhhcchHHHHHHhhccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 4555788888888888887774 4444332 44677788888888888888888777643
No 131
>KOG3866|consensus
Probab=74.10 E-value=9 Score=40.33 Aligned_cols=58 Identities=17% Similarity=0.340 Sum_probs=36.4
Q ss_pred HHHhhhhcCCCCcccCHHHHHHHHHHh-----CCCCCHHHH-----------HHHHHHcc-CCCCcccHHHHHHH
Q psy14118 673 KSVFKMYDQENSGYLSPFELRQALTSA-----GYHLNNHIL-----------NILAHRYS-GRDARISFDDFMMC 730 (766)
Q Consensus 673 ~~~F~~~D~d~~G~Is~~El~~~L~~~-----g~~ls~~~~-----------~~l~~~~d-d~dG~Is~~EF~~~ 730 (766)
+..|.++|.|+||+++..||..++..- ...-.++.. +.+++.+| |.|..|+.+||+..
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~ 321 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLND 321 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhh
Confidence 567999999999999999998776541 111111111 23455566 66666666666654
No 132
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=73.53 E-value=12 Score=32.50 Aligned_cols=32 Identities=16% Similarity=0.237 Sum_probs=25.6
Q ss_pred HHHHHHHHHHHcCCCcccCHHHHHHHHHHHhh
Q psy14118 541 TEAIRQFFQKLAGDDMEVDWMELKDILDYAMR 572 (766)
Q Consensus 541 ~~~~r~~F~~~d~~~g~i~~~el~~~l~~~~~ 572 (766)
.+.+|-+|++++|.+|.++...|..+|.....
T Consensus 2 ~dKyRylFslisd~~g~~~~~~l~~lL~d~lq 33 (90)
T PF09069_consen 2 EDKYRYLFSLISDSNGCMDQRKLGLLLHDVLQ 33 (90)
T ss_dssp HHHHHHHHHHHS-TTS-B-HHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHH
Confidence 46789999999999999999999999988743
No 133
>KOG1707|consensus
Probab=73.29 E-value=16 Score=42.19 Aligned_cols=90 Identities=20% Similarity=0.319 Sum_probs=61.8
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHH-hCCCCCHHHHHHHHHHcc--C----CCCcccHHHHHHHHHH---------
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTS-AGYHLNNHILNILAHRYS--G----RDARISFDDFMMCAVR--------- 733 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~-~g~~ls~~~~~~l~~~~d--d----~dG~Is~~EF~~~l~~--------- 733 (766)
..|.++|+..|.|.||.++-.||-.+-+. ++..++..+++.+....+ - .+..++...|+.+...
T Consensus 195 ~al~RIFki~D~d~D~~Lsd~Eln~fQ~~CF~~pl~p~~l~~vk~vv~e~~p~gv~~~~ltl~GFLfL~~lfiergr~Et 274 (625)
T KOG1707|consen 195 KALKRIFKISDSDNDGALSDAELNDFQKKCFNTPLDPQELEDVKNVVQEICPDGVYERGLTLPGFLFLNTLFIERGRHET 274 (625)
T ss_pred HHHHHHHhhhccccccccchhhhhHHHHHhcCCCCCHHHHHHHHHHHHhhcCchhhhccccccchHHHHHHHHHhccccc
Confidence 56899999999999999999998665443 567777777766655543 1 1234666666543320
Q ss_pred ---------------------------------------HHHHHHHHhccCCCCCceEEeCHHHHHH
Q psy14118 734 ---------------------------------------LKTMIDLFKARDPSSTNKATFTLEEWVE 761 (766)
Q Consensus 734 ---------------------------------------l~~~~~~F~~~D~d~~G~I~lt~~ef~~ 761 (766)
.+-+...|..+|.|+|| .++-+|+-.
T Consensus 275 tW~iLR~fgY~DsleL~~~~l~p~~~~~p~~s~ELs~~~~~Fl~~~f~~~D~d~Dg--~L~p~El~~ 339 (625)
T KOG1707|consen 275 TWTILRKFGYTDSLELTDEYLPPRLKVPPDQSVELSPKGYRFLVDVFEKFDRDNDG--ALSPEELKD 339 (625)
T ss_pred hhhhhhhcCCcchhhhhhhhcCccccCCCCcceeccHHHHHHHHHHHHhccCCCCC--CcCHHHHHH
Confidence 13455689999999999 567666643
No 134
>KOG1029|consensus
Probab=72.78 E-value=5.3 Score=46.93 Aligned_cols=66 Identities=23% Similarity=0.286 Sum_probs=53.5
Q ss_pred hhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccc
Q psy14118 539 KKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNA 617 (766)
Q Consensus 539 ~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 617 (766)
.....+|++|+.+| -..|.++-.+-+.+|-.
T Consensus 192 ~~klKY~QlFNa~DktrsG~Lsg~qaR~aL~q------------------------------------------------ 223 (1118)
T KOG1029|consen 192 HNKLKYRQLFNALDKTRSGYLSGQQARSALGQ------------------------------------------------ 223 (1118)
T ss_pred hhhhHHHHHhhhcccccccccccHHHHHHHHh------------------------------------------------
Confidence 34567899999999 78999998888887744
Q ss_pred cCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 618 CRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 618 ~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
.+++...+..|...-|.|+||+|+-+||.-.+..+
T Consensus 224 -----------------S~Lpq~~LA~IW~LsDvd~DGkL~~dEfilam~li 258 (1118)
T KOG1029|consen 224 -----------------SGLPQNQLAHIWTLSDVDGDGKLSADEFILAMHLI 258 (1118)
T ss_pred -----------------cCCchhhHhhheeeeccCCCCcccHHHHHHHHHHH
Confidence 23455667788999999999999999998877654
No 135
>KOG4578|consensus
Probab=71.33 E-value=3.1 Score=44.04 Aligned_cols=60 Identities=15% Similarity=0.191 Sum_probs=46.1
Q ss_pred HHHHhhhhcCCCCcccCHHHHHH---HHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHH
Q psy14118 672 WKSVFKMYDQENSGYLSPFELRQ---ALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVR 733 (766)
Q Consensus 672 l~~~F~~~D~d~~G~Is~~El~~---~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~ 733 (766)
+.--|..+|+|+++.|...|++. +|.+. .-...-...|++..| |+|.+|+++|++.++..
T Consensus 335 v~w~F~qLdkN~nn~i~rrEwKpFK~~l~k~--s~~rkC~rk~~~yCDlNkDKkISl~Ew~~CL~~ 398 (421)
T KOG4578|consen 335 VHWYFNQLDKNSNNDIERREWKPFKRVLLKK--SKPRKCSRKFFKYCDLNKDKKISLDEWRGCLGV 398 (421)
T ss_pred eeeeeeeecccccCccchhhcchHHHHHHhh--ccHHHHhhhcchhcccCCCceecHHHHhhhhcc
Confidence 45669999999999999998654 44332 123344677888889 99999999999999853
No 136
>KOG0035|consensus
Probab=66.69 E-value=16 Score=44.34 Aligned_cols=65 Identities=20% Similarity=0.246 Sum_probs=47.2
Q ss_pred HHHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHH--HHHH---HHHHcc-CCCCcccHHHHHHHHHH
Q psy14118 669 IRNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNH--ILNI---LAHRYS-GRDARISFDDFMMCAVR 733 (766)
Q Consensus 669 ~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~--~~~~---l~~~~d-d~dG~Is~~EF~~~l~~ 733 (766)
+.+++..|+.+|+...|.++.+++..+|..+|...-++ -+.+ ++...| +.-|.++|.+|...|.+
T Consensus 746 ~~ElrAle~~~~~~d~~aa~~e~~~~~Lmslg~~~e~ee~~~~e~~~lvn~~n~l~~~qv~~~e~~ddl~R 816 (890)
T KOG0035|consen 746 LDELRALENEQDKIDGGAASPEELLRCLMSLGYNTEEEEQGIAEWFRLVNKKNPLIQGQVQLLEFEDDLER 816 (890)
T ss_pred HHHHHHHHhHHHHhhcccCCHHHHHHHHHhcCcccchhHHHHHHHHHHHhccCcccccceeHHHHHhHhhh
Confidence 46788888888888888899999988888888776532 2333 333344 44578888888888764
No 137
>KOG1955|consensus
Probab=66.33 E-value=11 Score=42.15 Aligned_cols=60 Identities=15% Similarity=0.243 Sum_probs=48.4
Q ss_pred HHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHH
Q psy14118 671 NWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAV 732 (766)
Q Consensus 671 ~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~ 732 (766)
-+-.-|+-+..|-+|+|+..--++++.+ -++.-+++..|.+..| |.||-+++.||...|.
T Consensus 232 YYvnQFrtvQpDp~gfisGsaAknFFtK--Sklpi~ELshIWeLsD~d~DGALtL~EFcAAfH 292 (737)
T KOG1955|consen 232 YYVNQFRTVQPDPHGFISGSAAKNFFTK--SKLPIEELSHIWELSDVDRDGALTLSEFCAAFH 292 (737)
T ss_pred HHHhhhhcccCCcccccccHHHHhhhhh--ccCchHHHHHHHhhcccCccccccHHHHHhhHh
Confidence 3456688888899999998877777765 3467788888998888 9999999999988764
No 138
>KOG4347|consensus
Probab=65.67 E-value=7.3 Score=45.20 Aligned_cols=53 Identities=19% Similarity=0.228 Sum_probs=30.9
Q ss_pred HHHHHHHHHhhcCCCCccccHHHHHHHHHHH------HHHHHHhhhhcCCCCcccCHHHH
Q psy14118 639 KDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI------RNWKSVFKMYDQENSGYLSPFEL 692 (766)
Q Consensus 639 ~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~------~~l~~~F~~~D~d~~G~Is~~El 692 (766)
....+.+|...|.+.+|.|+|.+|+..+..+ +.++.+|+.+|.+++ ..+.+|.
T Consensus 554 ~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 554 LIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 3344556666666666666666666655442 455666666666666 5555555
No 139
>KOG4347|consensus
Probab=64.33 E-value=8.3 Score=44.76 Aligned_cols=70 Identities=14% Similarity=0.280 Sum_probs=56.3
Q ss_pred ccHHHHHHHHHH-------HHHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHH
Q psy14118 657 LGFEEFQQLWKD-------IRNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDF 727 (766)
Q Consensus 657 I~~~EF~~~~~~-------~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF 727 (766)
|+|+.|..++.. ...++++|..+|.+++|.|+..+|...|..+...-..+.+..+++.+| +++ ..+-+|-
T Consensus 535 i~~~~f~~~f~~l~pw~~s~~~~~rlF~l~D~s~~g~Ltf~~lv~gL~~l~~~~~~ek~~l~y~lh~~p~~-~~d~e~~ 612 (671)
T KOG4347|consen 535 IDYAQFLEVFRELLPWAVSLIFLERLFRLLDDSMTGLLTFKDLVSGLSILKAGDALEKLKLLYKLHDPPAD-ELDREEV 612 (671)
T ss_pred HHHhhHHHHhhccCchhHHHHHHHHHHHhcccCCcceeEHHHHHHHHHHHHhhhHHHHHHHHHhhccCCcc-ccccccc
Confidence 567777776654 256899999999999999999999999988765555677888999999 887 7777665
No 140
>cd02248 Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs) similar to papain, including the mammalian CPs (cathepsins B, C, F, H, L, K, O, S, V, X and W). Papain is an endopeptidase with specific substrate preferences, primarily for bulky hydrophobic or aromatic residues at the S2 subsite, a hydrophobic pocket in papain that accommodates the P2 sidechain of the substrate (the second residue away from the scissile bond). Most members of the papain subfamily are endopeptidases. Some exceptions to this rule can be explained by specific details of the catalytic domains like the occluding loop in cathepsin B which confers an additional carboxydipeptidyl activity and the mini-chain of cathepsin H resulting in an N-terminal exopeptidase activity. Papain-like CPs have different functions in various organisms. Plant CPs are used to mobilize storage proteins in seeds. Parasitic CPs act extracellularly to help invade tissues and cells, to h
Probab=61.03 E-value=33 Score=34.39 Aligned_cols=44 Identities=16% Similarity=0.347 Sum_probs=34.1
Q ss_pred CCCCCceeEEeeEEEecccCCCCCCceeEEEEeCCCCCCCcccccCCCCCccCCCCCHHHHHHhCCccCCCCeEEEeHhH
Q psy14118 173 GLVKGHAYSITRIKYVDISTPNTSGKIPLIRMRNPWGNEAEWNGAWSDKSQEWRFIPDHEKRELGLTFDDDGEFWMSYKD 252 (766)
Q Consensus 173 GL~~~haYsv~~v~~~~~~~~~~~~~~~ll~lrNPWg~~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~Fwm~~~d 252 (766)
....+||=.|++...- .+.....+||.|| +.| .++|-|||+.++
T Consensus 155 ~~~~~Hav~iVGy~~~--------~~~~ywiv~NSWG-------------~~W---------------G~~Gy~~i~~~~ 198 (210)
T cd02248 155 NTNLNHAVLLVGYGTE--------NGVDYWIVKNSWG-------------TSW---------------GEKGYIRIARGS 198 (210)
T ss_pred CCcCCEEEEEEEEeec--------CCceEEEEEcCCC-------------Ccc---------------ccCcEEEEEcCC
Confidence 3456899999999873 3567899999999 223 267999999887
No 141
>KOG1265|consensus
Probab=58.61 E-value=57 Score=39.51 Aligned_cols=77 Identities=17% Similarity=0.317 Sum_probs=61.1
Q ss_pred ccHHHHHHHHHHH---HHHHHHhhhhcCCCCcccCHHHHHHHHHHhC----------CCCCHHHHHHHHHHcc-C----C
Q psy14118 657 LGFEEFQQLWKDI---RNWKSVFKMYDQENSGYLSPFELRQALTSAG----------YHLNNHILNILAHRYS-G----R 718 (766)
Q Consensus 657 I~~~EF~~~~~~~---~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g----------~~ls~~~~~~l~~~~d-d----~ 718 (766)
.+++.|..++..+ .++..+|..+-.++.-+++.++|..+|+.-. ..++...+..+++.|. + .
T Consensus 205 f~~e~f~~~l~klcpR~eie~iF~ki~~~~kpylT~~ql~dfln~~QrDpRLNeilfp~~~~~r~~~liekyEp~~~~a~ 284 (1189)
T KOG1265|consen 205 FTLEKFYRLLNKLCPRPEIEEIFRKISGKKKPYLTKEQLVDFLNKKQRDPRLNEILFPPADPRRIQSLIEKYEPNSDNAE 284 (1189)
T ss_pred ccHHHHHHHHHhcCCchhHHHHHHHhccCCCccccHHHHHHHHhhhccCcchhhhhcCCCCHHHHHHHHHHcCCchhhhh
Confidence 4455556666655 6899999999999889999999999998742 2357788999999997 4 4
Q ss_pred CCcccHHHHHHHHHH
Q psy14118 719 DARISFDDFMMCAVR 733 (766)
Q Consensus 719 dG~Is~~EF~~~l~~ 733 (766)
+|.++-+-|+..+..
T Consensus 285 ~gqms~dgf~ryl~g 299 (1189)
T KOG1265|consen 285 KGQMSTDGFVRYLMG 299 (1189)
T ss_pred ccccchhhhHHHhhC
Confidence 589999999988753
No 142
>PF09069 EF-hand_3: EF-hand; InterPro: IPR015154 Like other EF hand domains, this domain forms a helix-loop-helix motif, though since it does not contain the canonical pattern of calcium binding residues found in many EF hand domains, it does not bind calcium ions. The main function of this domain is the provision of specificity in beta-dystroglycan recognition, though in dystrophin it serves an additional role: stabilisation of the WW domain (IPR001202 from INTERPRO), enhancing dystroglycan binding []. ; PDB: 1EG3_A 1EG4_A.
Probab=52.89 E-value=80 Score=27.55 Aligned_cols=62 Identities=11% Similarity=0.215 Sum_probs=35.5
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHh-------CC----CCCHHHHHHHHHHccCCCCcccHHHHHHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSA-------GY----HLNNHILNILAHRYSGRDARISFDDFMMCAVR 733 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~-------g~----~ls~~~~~~l~~~~dd~dG~Is~~EF~~~l~~ 733 (766)
++++-+|..+ .|.+|.++..-|..+|+++ |+ .-.+..++..|... .....|+.++|+..|..
T Consensus 3 dKyRylFsli-sd~~g~~~~~~l~~lL~d~lqip~~vgE~~aFg~~e~sv~sCF~~~-~~~~~I~~~~Fl~wl~~ 75 (90)
T PF09069_consen 3 DKYRYLFSLI-SDSNGCMDQRKLGLLLHDVLQIPRAVGEGPAFGYIEPSVRSCFQQV-QLSPKITENQFLDWLMS 75 (90)
T ss_dssp HHHHHHHHHH-S-TTS-B-HHHHHHHHHHHHHHHHHTT-GGGGT--HHHHHHHHHHT-TT-S-B-HHHHHHHHHT
T ss_pred HHHHHHHHHH-cCCCCCCcHHHHHHHHHHHHHHHHHhCccccccCcHHHHHHHhccc-CCCCccCHHHHHHHHHh
Confidence 5677888888 5778888888887777753 22 12344455555544 24456888999888753
No 143
>PF07910 Peptidase_C78: Peptidase family C78; InterPro: IPR012462 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This entry contains UfSP1 and UfSP2, which are cysteine peptidases required for the processing and activation of Ubiquitin fold modifier 1 (Ufm1, IPR005375 from INTERPRO) and for its release from conjugated cellular proteins. UfSP1 and UfSP2 are 217 aa and 461 aa respectively [, ]. The peptidases belong to MEROPS peptidase family C78, clan CA. The UfSP2 family have an N-terminal extension with one or more zinc finger domains of the C2H2 type (IPR007087 from INTERPRO), which have been shown to be involved in protein:protein interaction. UfSP2 is present in most, if not all, multi-cellular organisms including plants, nematodes, flies, and mammals, whereas UfSP1 is not present in plants and nematodes []. ; PDB: 3OQC_B 2Z84_A.
Probab=51.68 E-value=40 Score=34.51 Aligned_cols=99 Identities=19% Similarity=0.242 Sum_probs=51.0
Q ss_pred hHHHHHHHhhh---hcCCcccccCC---------Ch--hhhhhhccCCeeEEEEcC-C--C---chHHHHHHHHHhhcCC
Q psy14118 94 WSALLEKAYAK---LHGSYEALKGG---------ST--CEAMEDFTGGVSEMYELN-E--A---PSNLWQILLKAHERSS 153 (766)
Q Consensus 94 W~~LlEKAyAK---l~GsY~~l~gg---------~~--~~al~dlTG~~~~~~~l~-~--~---~~~lw~~l~~~~~~g~ 153 (766)
.-.+||+|+.| ..|. .+.++ .+ .-.|..| |-++..+++. . . .+.+.+.|.+.+..+.
T Consensus 60 iQ~~le~awdkG~d~~G~--~~~~~~~GsrkWIGt~E~~~~l~~~-gi~~~i~~f~~~~~~~~~~~~l~~~v~~yF~~~~ 136 (218)
T PF07910_consen 60 IQQWLEEAWDKGFDPQGA--QLTGGFVGSRKWIGTTEASALLRSL-GIPCKIVDFPKSGSEIRAHPRLLDWVWNYFESGC 136 (218)
T ss_dssp HHHHHHHCTSS---C---------CGTT------HHHHHHHHHHC--SEEEEEEES-SGCCC---CCGHHHHHHHHCCT-
T ss_pred HHHHHHHHHhhcCCcccc--cccccccccccEEcHHHHHHHHhhC-CceEEEEEEECCCcccccHHHHHHHHHHHhhcCC
Confidence 45799999999 5555 22222 11 2346667 9999999988 3 1 2568888888887762
Q ss_pred c-eeee--cCCCCcccccccCCCCCCCceeEEeeEEEecccCCCCCCceeEEEEeCCCC
Q psy14118 154 L-MGCS--IEPDPSVLEMQTPQGLVKGHAYSITRIKYVDISTPNTSGKIPLIRMRNPWG 209 (766)
Q Consensus 154 l-~~~~--~~~~~~~~~~~~~~GL~~~haYsv~~v~~~~~~~~~~~~~~~ll~lrNPWg 209 (766)
- ..-. |...| .. .| ..+|+++|+++..- . .+..-+.|-+|--
T Consensus 137 ~~~~~~~~t~~~P----iy--lq-h~ghS~TIvGie~~------~-~g~~~LLVlDP~~ 181 (218)
T PF07910_consen 137 GSPSQSRQTNKPP----IY--LQ-HDGHSRTIVGIERN------K-DGEVNLLVLDPHY 181 (218)
T ss_dssp -----------------EE--EE-ETTEEEEEEEEEE-------T-T--EEEEEE-TT-
T ss_pred CccccccccCCCC----eE--eC-ccccceEEEEEEEC------C-CCCEEEEEECCCC
Confidence 1 0000 00000 00 01 17899999999983 2 3334444667754
No 144
>KOG0042|consensus
Probab=51.10 E-value=29 Score=39.90 Aligned_cols=71 Identities=17% Similarity=0.171 Sum_probs=60.9
Q ss_pred cchhhHHHHHHHHHHHc-CCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHh
Q psy14118 536 EKEKKTEAIRQFFQKLA-GDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALIC 614 (766)
Q Consensus 536 ~~~~~~~~~r~~F~~~d-~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 614 (766)
-++++....+.-|..+| ++.+.+...+..++|...
T Consensus 587 ~~~~~~~~~~~rf~~lD~~k~~~~~i~~v~~vlk~~-------------------------------------------- 622 (680)
T KOG0042|consen 587 LTPEDFLRRKTRFAFLDADKKAYQAIADVLKVLKSE-------------------------------------------- 622 (680)
T ss_pred cCHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHh--------------------------------------------
Confidence 46788888889999998 788999988888888764
Q ss_pred ccccCCCCccccccccccCCCCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 615 GNACRDTPLGAALETKTTTEGGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 615 ~~~~~~~~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
+.+.+++.+.++.+..|.+.+|.+...||.+++..+
T Consensus 623 -------------------~~~~d~~~~~~~l~ea~~~~~g~v~l~e~~q~~s~~ 658 (680)
T KOG0042|consen 623 -------------------NVGWDEDRLHEELQEADENLNGFVELREFLQLMSAI 658 (680)
T ss_pred -------------------cCCCCHHHHHHHHHHHHHhhcceeeHHHHHHHHHHH
Confidence 246778899999999999999999999999988765
No 145
>COG4870 Cysteine protease [Posttranslational modification, protein turnover, chaperones]
Probab=48.12 E-value=20 Score=39.07 Aligned_cols=57 Identities=30% Similarity=0.496 Sum_probs=37.1
Q ss_pred CCCCCCceeEEeeEEEe-ccc-CCCCCCceeEEEEeCCCCCCCcccccCCCCCccCCCCCHHHHHHhCCccCCCCeEEEe
Q psy14118 172 QGLVKGHAYSITRIKYV-DIS-TPNTSGKIPLIRMRNPWGNEAEWNGAWSDKSQEWRFIPDHEKRELGLTFDDDGEFWMS 249 (766)
Q Consensus 172 ~GL~~~haYsv~~v~~~-~~~-~~~~~~~~~ll~lrNPWg~~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~Fwm~ 249 (766)
.|...|||-.|++...- ++. ......+.--++|||.|| ..| .++|-|||+
T Consensus 260 s~~~~gHAv~iVGyDDs~~~n~~~~~~~g~GAfiikNSWG-------------t~w---------------G~~GYfwis 311 (372)
T COG4870 260 SGENWGHAVLIVGYDDSFDINNFKYGPPGDGAFIIKNSWG-------------TNW---------------GENGYFWIS 311 (372)
T ss_pred ccccccceEEEEeccccccccccccCCCCCceEEEECccc-------------ccc---------------ccCceEEEE
Confidence 34678999999988662 111 111222344788999999 122 367999999
Q ss_pred HhHHHhh
Q psy14118 250 YKDFLKY 256 (766)
Q Consensus 250 ~~df~~~ 256 (766)
+.+-..-
T Consensus 312 Y~ya~~g 318 (372)
T COG4870 312 YYYALNG 318 (372)
T ss_pred eeecccc
Confidence 9986544
No 146
>PF00112 Peptidase_C1: Papain family cysteine protease This is family C1 in the peptidase classification. ; InterPro: IPR000668 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of proteins belong to the peptidase family C1, sub-family C1A (papain family, clan CA). It includes proteins classed as non-peptidase homologs. These are have either been shown experimentally to lack peptidase activity or lack one or more of the active site residues. The papain family has a wide variety of activities, including broad-range (papain) and narrow-range endo-peptidases, aminopeptidases, dipeptidyl peptidases and enzymes with both exo- and endo-peptidase activity []. Members of the papain family are widespread, found in baculovirus [], eubacteria, yeast, and practically all protozoa, plants and mammals []. The proteins are typically lysosomal or secreted, and proteolytic cleavage of the propeptide is required for enzyme activation, although bleomycin hydrolase is cytosolic in fungi and mammals []. Papain-like cysteine proteinases are essentially synthesised as inactive proenzymes (zymogens) with N-terminal propeptide regions. The activation process of these enzymes includes the removal of propeptide regions. The propeptide regions serve a variety of functions in vivo and in vitro. The pro-region is required for the proper folding of the newly synthesised enzyme, the inactivation of the peptidase domain and stabilisation of the enzyme against denaturing at neutral to alkaline pH conditions. Amino acid residues within the pro-region mediate their membrane association, and play a role in the transport of the proenzyme to lysosomes. Among the most notable features of propeptides is their ability to inhibit the activity of their cognate enzymes and that certain propeptides exhibit high selectivity for inhibition of the peptidases from which they originate []. The catalytic residues of papain are Cys-25 and His-159, other important residues being Gln-19, which helps form the 'oxyanion hole', and Asn-175, which orientates the imidazole ring of His-159. ; GO: 0008234 cysteine-type peptidase activity, 0006508 proteolysis; PDB: 3MOR_B 3HHI_B 1S4V_A 3F75_A 1MEG_A 1PCI_C 1PPO_A 3HD3_B 1F29_A 1EWL_A ....
Probab=47.48 E-value=25 Score=35.31 Aligned_cols=43 Identities=30% Similarity=0.536 Sum_probs=34.2
Q ss_pred CCCCceeEEeeEEEecccCCCCCCceeEEEEeCCCCCCCcccccCCCCCccCCCCCHHHHHHhCCccCCCCeEEEeHhH
Q psy14118 174 LVKGHAYSITRIKYVDISTPNTSGKIPLIRMRNPWGNEAEWNGAWSDKSQEWRFIPDHEKRELGLTFDDDGEFWMSYKD 252 (766)
Q Consensus 174 L~~~haYsv~~v~~~~~~~~~~~~~~~ll~lrNPWg~~~eW~G~wsd~s~~W~~~~~~~~~~l~~~~~~dG~Fwm~~~d 252 (766)
...+||-.|++...- .+.....+||.|| ..| .+.|.|||+...
T Consensus 163 ~~~~Hav~iVGy~~~--------~~~~~wiv~NSWG-------------~~W---------------G~~Gy~~i~~~~ 205 (219)
T PF00112_consen 163 ESGGHAVLIVGYDDE--------NGKGYWIVKNSWG-------------TDW---------------GDNGYFRISYDY 205 (219)
T ss_dssp SSEEEEEEEEEEEEE--------TTEEEEEEE-SBT-------------TTS---------------TBTTEEEEESSS
T ss_pred ccccccccccccccc--------cceeeEeeehhhC-------------Ccc---------------CCCeEEEEeeCC
Confidence 678999999999885 4788999999999 223 268999999875
No 147
>KOG3866|consensus
Probab=47.18 E-value=30 Score=36.57 Aligned_cols=56 Identities=20% Similarity=0.301 Sum_probs=43.7
Q ss_pred HHHHHhhcCCCCccccHHHHHHHHHHH----------------------HHHHHHhhhhcCCCCcccCHHHHHHHHHH
Q psy14118 643 RSMVAMLDVDRSGKLGFEEFQQLWKDI----------------------RNWKSVFKMYDQENSGYLSPFELRQALTS 698 (766)
Q Consensus 643 ~~l~~~~D~d~~G~I~~~EF~~~~~~~----------------------~~l~~~F~~~D~d~~G~Is~~El~~~L~~ 698 (766)
+-+|...|.|+||.++-.|.-+++..- ..-..+.+..|.|.|..|+.+||.+.-..
T Consensus 247 KTFF~LHD~NsDGfldeqELEaLFtkELEKvYdpkNeeDDM~EmeEErlRMREHVMk~vDtNqDRlvtleEFL~~t~~ 324 (442)
T KOG3866|consen 247 KTFFALHDLNSDGFLDEQELEALFTKELEKVYDPKNEEDDMKEMEEERLRMREHVMKQVDTNQDRLVTLEEFLNDTDN 324 (442)
T ss_pred chheeeeccCCcccccHHHHHHHHHHHHHHhcCCCCcchHHHHHHHHHHHHHHHHHHhcccchhhhhhHHHHHhhhhh
Confidence 346778899999999999998887642 11245788999999999999999766544
No 148
>PF01023 S_100: S-100/ICaBP type calcium binding domain; InterPro: IPR013787 The calcium-binding domain found in S100 and CaBP-9k proteins is a subfamily of the EF-hand calcium-binding domain []. S100s are small dimeric acidic calcium and zinc-binding proteins abundant in the brain, with S100B playing an important role in modulating the proliferation and differentiation of neurons and glia cells []. S100 proteins have two different types of calcium-binding sites: a low affinity one with a special structure, and a 'normal' EF-hand type high-affinity site. Calbindin-D9k (CaBP-9k) also belong to this family of proteins, but it does not form dimers. CaBP-9k is a cytosolic protein expressed in a variety of tissues. Although its precise function is unknown, it appears to be under the control of the steroid hormones oestrogen and progesterone in the female reproductive system []. In the intestine, CaBP-9k may be involved in calcium absorption by mediating intracellular diffusion []. This entry represents a subdomain of the calcium-binding domain found in S100, CaBP-9k, and related proteins.; PDB: 2RGI_A 4DUQ_B 2KAY_B 2KAX_A 2CNP_A 1CNP_A 1A03_A 1JWD_B 2JTT_A 1XK4_B ....
Probab=45.91 E-value=35 Score=25.43 Aligned_cols=33 Identities=36% Similarity=0.532 Sum_probs=26.9
Q ss_pred hhHHHHHHHHHHHc---CCCcccCHHHHHHHHHHHh
Q psy14118 539 KKTEAIRQFFQKLA---GDDMEVDWMELKDILDYAM 571 (766)
Q Consensus 539 ~~~~~~r~~F~~~d---~~~g~i~~~el~~~l~~~~ 571 (766)
.....+-.+|.+++ +....++..||+++|+.-+
T Consensus 3 ~ai~~iI~vFhkYa~~~Gd~~~Lsk~Elk~Ll~~El 38 (44)
T PF01023_consen 3 KAIETIIDVFHKYAGKEGDKDTLSKKELKELLEKEL 38 (44)
T ss_dssp HHHHHHHHHHHHHHTSSSSTTSEEHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHhccCCCCCeEcHHHHHHHHHHHH
Confidence 34567788999997 5567999999999998864
No 149
>PLN02222 phosphoinositide phospholipase C 2
Probab=43.50 E-value=58 Score=38.29 Aligned_cols=28 Identities=7% Similarity=0.233 Sum_probs=14.9
Q ss_pred HHHHHHHHHhhcCCCCccccHHHHHHHHHH
Q psy14118 639 KDVCRSMVAMLDVDRSGKLGFEEFQQLWKD 668 (766)
Q Consensus 639 ~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~ 668 (766)
..++..+|..+-. ++.++.++|..++..
T Consensus 24 ~~ei~~if~~~~~--~~~mt~~~l~~FL~~ 51 (581)
T PLN02222 24 PREIKTIFEKYSE--NGVMTVDHLHRFLID 51 (581)
T ss_pred cHHHHHHHHHhcC--CCCcCHHHHHHHHHH
Confidence 3466666665532 245666665555543
No 150
>PLN02952 phosphoinositide phospholipase C
Probab=41.72 E-value=1.1e+02 Score=36.07 Aligned_cols=82 Identities=9% Similarity=0.017 Sum_probs=54.6
Q ss_pred CCcccCHHHHHHHHHHhC--CCCCHHHHHHHHHHccCCCCcccHHHHHHHHHHHH--------HHHHHHhcc----C-CC
Q psy14118 683 NSGYLSPFELRQALTSAG--YHLNNHILNILAHRYSGRDARISFDDFMMCAVRLK--------TMIDLFKAR----D-PS 747 (766)
Q Consensus 683 ~~G~Is~~El~~~L~~~g--~~ls~~~~~~l~~~~dd~dG~Is~~EF~~~l~~l~--------~~~~~F~~~----D-~d 747 (766)
+.|.++.+|+..+.+.+. ......++..++..+..+++.++.++|..++...+ ....+|..+ . ..
T Consensus 13 ~~g~l~f~~f~~f~~~~k~~~~~~r~ei~~lf~~~~~~~~~mt~~~l~~FL~~~Q~e~~~~~~~~~~i~~~~~~~~~~~~ 92 (599)
T PLN02952 13 DSGSYNYKMFNLFNRKFKITEAEPPDDVKDVFCKFSVGGGHMGADQLRRFLVLHQDELDCTLAEAQRIVEEVINRRHHVT 92 (599)
T ss_pred cCCCcCHHHHHHHHHHhccccCCChHHHHHHHHHHhCCCCccCHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHhhccccc
Confidence 468999999988877663 23478899999999985556899999999986432 223333221 1 11
Q ss_pred CCceEEeCHHHHHHHHh
Q psy14118 748 STNKATFTLEEWVENTL 764 (766)
Q Consensus 748 ~~G~I~lt~~ef~~~~~ 764 (766)
..+.-.++++.|....+
T Consensus 93 ~~~~~~l~~~~F~~~l~ 109 (599)
T PLN02952 93 RYTRHGLNLDDFFHFLL 109 (599)
T ss_pred cccccCcCHHHHHHHHc
Confidence 11112478888887765
No 151
>PF14513 DAG_kinase_N: Diacylglycerol kinase N-terminus; PDB: 1TUZ_A.
Probab=41.00 E-value=96 Score=29.34 Aligned_cols=62 Identities=19% Similarity=0.185 Sum_probs=38.1
Q ss_pred ccccHHHHHHHHHHH----HHHHHHhhhhcC-------CCCcccCHHHHHHHHHHh-CCCCCHHHHHHHHHHcc
Q psy14118 655 GKLGFEEFQQLWKDI----RNWKSVFKMYDQ-------ENSGYLSPFELRQALTSA-GYHLNNHILNILAHRYS 716 (766)
Q Consensus 655 G~I~~~EF~~~~~~~----~~l~~~F~~~D~-------d~~G~Is~~El~~~L~~~-g~~ls~~~~~~l~~~~d 716 (766)
+.|+-.||.++-..+ ..++.+.+.|.. +..+.|+.+.|+.+|+.. +..++++.++.+|..|-
T Consensus 6 ~~lsp~eF~qLq~y~eys~kklkdvl~eF~~~g~~~~~~~~~~Id~egF~~Fm~~yLe~d~P~~lc~hLF~sF~ 79 (138)
T PF14513_consen 6 VSLSPEEFAQLQKYSEYSTKKLKDVLKEFHGDGSLAKYNPEEPIDYEGFKLFMKTYLEVDLPEDLCQHLFLSFQ 79 (138)
T ss_dssp S-S-HHHHHHHHHHHHH----HHHHHHHH-HTSGGGGGEETTEE-HHHHHHHHHHHTT-S--HHHHHHHHHHS-
T ss_pred eccCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccCCCCCcCHHHHHHHHHHHHcCCCCHHHHHHHHHHHh
Confidence 567778887765543 344555444432 235689999999999984 67799999999999987
No 152
>PF08726 EFhand_Ca_insen: Ca2+ insensitive EF hand; InterPro: IPR014837 EF hands are helix-loop-helix binding motifs involved in the regulation of many cellular processes. EF hands usually bind to Ca2+ ions, which cause a major conformational change that allows the protein to interact with its designated targets. This protein corresponds to an EF hand which has partially or entirely lost its calcium-binding properties. The calcium insensitive EF hand is still able to mediate protein-protein recognition []. ; PDB: 1H8B_A 1SJJ_B.
Probab=36.06 E-value=33 Score=28.35 Aligned_cols=28 Identities=29% Similarity=0.381 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHcCCCcccCHHHHHHHHH
Q psy14118 541 TEAIRQFFQKLAGDDMEVDWMELKDILD 568 (766)
Q Consensus 541 ~~~~r~~F~~~d~~~g~i~~~el~~~l~ 568 (766)
.+++++.|+.++++.+.|+.+||++.|.
T Consensus 5 ~eqv~~aFr~lA~~KpyVT~~dLr~~l~ 32 (69)
T PF08726_consen 5 AEQVEEAFRALAGGKPYVTEEDLRRSLT 32 (69)
T ss_dssp CHHHHHHHHHHCTSSSCEEHHHHHHHS-
T ss_pred HHHHHHHHHHHHcCCCcccHHHHHHHcC
Confidence 4678889999998889999999999884
No 153
>KOG0998|consensus
Probab=32.29 E-value=64 Score=39.95 Aligned_cols=62 Identities=16% Similarity=0.311 Sum_probs=48.6
Q ss_pred HHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHHH
Q psy14118 671 NWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRLK 735 (766)
Q Consensus 671 ~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l~ 735 (766)
.+..+|.-+... +|.++..-.+.+|.. -.++.+.+..+....| +.+|.+++.||.-.|....
T Consensus 130 ky~q~f~s~~p~-~g~~sg~~~~pil~~--s~Lp~~~l~~iw~l~d~d~~g~Ld~~ef~~am~l~~ 192 (847)
T KOG0998|consen 130 KYDQIFRSLSPS-NGLLSGDKAKPILLN--SKLPSDVLGRIWELSDIDKDGNLDRDEFAVAMHLIN 192 (847)
T ss_pred HHHHHHhccCCC-CCccccchhhhhhhc--CCCChhhhccccccccccccCCCChhhhhhhhhHHH
Confidence 456678888876 899998888888755 3467777777888888 9999999999988775443
No 154
>KOG4403|consensus
Probab=31.35 E-value=1e+02 Score=34.27 Aligned_cols=31 Identities=19% Similarity=0.373 Sum_probs=16.9
Q ss_pred CCCCHHHHHHHHHhhcCCCCccccHHHHHHH
Q psy14118 635 GGFSKDVCRSMVAMLDVDRSGKLGFEEFQQL 665 (766)
Q Consensus 635 ~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~ 665 (766)
..++-+.|+.|-+.+|.|.+|.|+.+|=-.+
T Consensus 63 dklg~EAir~iHrqmDDD~nG~Id~~ESdeF 93 (575)
T KOG4403|consen 63 DKLGYEAIRDIHRQMDDDHNGSIDVEESDEF 93 (575)
T ss_pred chhhHHHHHHHHHhcccccCCCcccccchHH
Confidence 3445555556666666666666655553333
No 155
>PF05543 Peptidase_C47: Staphopain peptidase C47; InterPro: IPR008750 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to the peptidase family C47 (staphopain family, clan CA). The type example are the staphopains, which are one of four major families of proteinases secreted by the Gram-positive Staphylococcus aureus. These staphylococcal cysteine proteases are secreted as preproenzymes that are proteolytically cleaved to generate the mature enzyme [, , ].; GO: 0008234 cysteine-type peptidase activity, 0006508 proteolysis; PDB: 1X9Y_D 1Y4H_B 1PXV_B 1CV8_A.
Probab=30.67 E-value=1.5e+02 Score=29.24 Aligned_cols=55 Identities=15% Similarity=0.238 Sum_probs=31.8
Q ss_pred HHHHHHHhhcCCceeeecCCCCcccccccCCCCCCCceeEEeeEEEecccCCCCCCceeEEEEeCCCC
Q psy14118 142 WQILLKAHERSSLMGCSIEPDPSVLEMQTPQGLVKGHAYSITRIKYVDISTPNTSGKIPLIRMRNPWG 209 (766)
Q Consensus 142 w~~l~~~~~~g~l~~~~~~~~~~~~~~~~~~GL~~~haYsv~~v~~~~~~~~~~~~~~~ll~lrNPWg 209 (766)
++.+.+..+++.-+..... ......|...|||-+|.+-.... .+.+.+-+.|||-
T Consensus 91 ~~eV~~~~~~nk~i~i~~~------~v~~~~~~~~gHAlavvGya~~~-------~g~~~y~~WNPW~ 145 (175)
T PF05543_consen 91 FDEVKKLIDNNKGIAILAD------RVEQTNGPHAGHALAVVGYAKPN-------NGQKTYYFWNPWW 145 (175)
T ss_dssp HHHHHHHHHTT-EEEEEEE------ETTSCTTB--EEEEEEEEEEEET-------TSEEEEEEE-TT-
T ss_pred HHHHHHHHHcCCCeEEEec------ccccCCCCccceeEEEEeeeecC-------CCCeEEEEeCCcc
Confidence 5556655555443332211 11123788899999999998751 3578899999995
No 156
>KOG2871|consensus
Probab=29.95 E-value=59 Score=35.48 Aligned_cols=59 Identities=19% Similarity=0.316 Sum_probs=43.2
Q ss_pred HHHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHH-Hcc-CCCCcccHHHHH
Q psy14118 670 RNWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAH-RYS-GRDARISFDDFM 728 (766)
Q Consensus 670 ~~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~-~~d-d~dG~Is~~EF~ 728 (766)
++++++|+.+|+.++|+|+..-++.+|..+...+++.+.-.+++ ..| .+-|.|-.++|.
T Consensus 309 ~q~rR~f~a~d~~d~nfis~s~~~~vm~~~N~~vse~a~v~l~~~~l~pE~~~iil~~d~l 369 (449)
T KOG2871|consen 309 EQLRRNFHAYDPEDNNFISCSGLQIVMTALNRLVSEPAYVMLMRQPLDPESLGIILLEDFL 369 (449)
T ss_pred HHHHhhhhccCccCCCeeecHHHHHHHHHhcccccCHHHHHHhcCccChhhcceEEecccc
Confidence 58999999999999999999999999998886666655444443 344 444445444444
No 157
>PF11116 DUF2624: Protein of unknown function (DUF2624); InterPro: IPR020277 This entry contains proteins with no known function.
Probab=29.23 E-value=2.4e+02 Score=24.34 Aligned_cols=50 Identities=6% Similarity=-0.051 Sum_probs=36.3
Q ss_pred cccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHHHHH
Q psy14118 685 GYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCAVRL 734 (766)
Q Consensus 685 G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l~~l 734 (766)
..||.+||.+..+..+..++.++++.++..+. +.=.-.+-++=..++..+
T Consensus 13 n~iT~~eLlkyskqy~i~it~~QA~~I~~~lr~k~inIfn~~~r~~llkei 63 (85)
T PF11116_consen 13 NNITAKELLKYSKQYNISITKKQAEQIANILRGKNINIFNEQERKKLLKEI 63 (85)
T ss_pred hcCCHHHHHHHHHHhCCCCCHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHH
Confidence 35899999999999999999999999998876 332334444444444443
No 158
>KOG1785|consensus
Probab=28.95 E-value=8.4e+02 Score=27.14 Aligned_cols=78 Identities=18% Similarity=0.074 Sum_probs=52.0
Q ss_pred CCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCccc---HHHHHHHHHHHHHHHHHHhccCCCCCceE-EeCHH
Q psy14118 683 NSGYLSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARIS---FDDFMMCAVRLKTMIDLFKARDPSSTNKA-TFTLE 757 (766)
Q Consensus 683 ~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is---~~EF~~~l~~l~~~~~~F~~~D~d~~G~I-~lt~~ 757 (766)
..--+...+|+++|.+..--.+.-+..++-..+| ..++.|| |+-|.+++.-...+.+-++.+-....|++ -+||+
T Consensus 187 ~k~ivPW~~F~q~L~~~Hpi~~gleAmaLktTIDLtcnd~iS~FEFDvFTRLFqPw~tllkNWq~LavtHPGYmAFLTYD 266 (563)
T KOG1785|consen 187 KKTIVPWKTFRQALHKVHPISSGLEAMALKTTIDLTCNDFISNFEFDVFTRLFQPWKTLLKNWQTLAVTHPGYMAFLTYD 266 (563)
T ss_pred CcccccHHHHHHHHHhcCCCcchhHHHHhhceeccccccceeeehhhhHHHhhccHHHHHHhhhhhhccCCceeEEeeHH
Confidence 3455678889999887643333444444555577 7777776 45556666556677777888888888887 56777
Q ss_pred HHH
Q psy14118 758 EWV 760 (766)
Q Consensus 758 ef~ 760 (766)
|-.
T Consensus 267 EVk 269 (563)
T KOG1785|consen 267 EVK 269 (563)
T ss_pred HHH
Confidence 653
No 159
>PLN02228 Phosphoinositide phospholipase C
Probab=28.13 E-value=1.6e+02 Score=34.64 Aligned_cols=31 Identities=13% Similarity=0.308 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 637 FSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 637 ~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
....++..+|..+-. ++.|+.++|..++...
T Consensus 21 ~~~~ei~~if~~~s~--~~~~t~~~~~~FL~~~ 51 (567)
T PLN02228 21 EPPVSIKRLFEAYSR--NGKMSFDELLRFVSEV 51 (567)
T ss_pred CCcHHHHHHHHHhcC--CCccCHHHHHHHHHHh
Confidence 356777777777643 2467777777766543
No 160
>PLN02222 phosphoinositide phospholipase C 2
Probab=27.52 E-value=1.7e+02 Score=34.54 Aligned_cols=65 Identities=12% Similarity=0.152 Sum_probs=47.6
Q ss_pred HHHHHHHHHHcCCCcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccCCC
Q psy14118 542 EAIRQFFQKLAGDDMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACRDT 621 (766)
Q Consensus 542 ~~~r~~F~~~d~~~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 621 (766)
..++.+|.++.+ ++.++.++|..+|+..-
T Consensus 25 ~ei~~if~~~~~-~~~mt~~~l~~FL~~~Q-------------------------------------------------- 53 (581)
T PLN02222 25 REIKTIFEKYSE-NGVMTVDHLHRFLIDVQ-------------------------------------------------- 53 (581)
T ss_pred HHHHHHHHHhcC-CCCcCHHHHHHHHHHhc--------------------------------------------------
Confidence 378889999975 47999999999998751
Q ss_pred CccccccccccCCCCCCHHHHHHHHHhhcC-CCCccccHHHHHHHHHH
Q psy14118 622 PLGAALETKTTTEGGFSKDVCRSMVAMLDV-DRSGKLGFEEFQQLWKD 668 (766)
Q Consensus 622 ~l~~~~~~~~~~~~~~s~~~i~~l~~~~D~-d~~G~I~~~EF~~~~~~ 668 (766)
.....+.+.++.||+.+.. ...+.++++.|..++..
T Consensus 54 -----------~~~~~~~~~~~~ii~~~~~~~~~~~~~~~gF~~yL~s 90 (581)
T PLN02222 54 -----------KQDKATREDAQSIINSASSLLHRNGLHLDAFFKYLFG 90 (581)
T ss_pred -----------CCccCCHHHHHHHHHhhhhhhhccCcCHHHHHHHhcC
Confidence 0123567788888887632 23567999999887753
No 161
>KOG2243|consensus
Probab=26.75 E-value=86 Score=39.63 Aligned_cols=31 Identities=10% Similarity=0.361 Sum_probs=26.3
Q ss_pred CCCHHHHHHHHHhhcCCCCccccHHHHHHHH
Q psy14118 636 GFSKDVCRSMVAMLDVDRSGKLGFEEFQQLW 666 (766)
Q Consensus 636 ~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~ 666 (766)
..+..++.-++.....|.+..++|++|+.-+
T Consensus 4088 ~ytqse~dfllscae~dend~~~y~dfv~rf 4118 (5019)
T KOG2243|consen 4088 HYTQSEIDFLLSCAEADENDMFDYEDFVDRF 4118 (5019)
T ss_pred cchhHHHHHHHHhhccCccccccHHHHHHHh
Confidence 4567888889999999999999999998744
No 162
>KOG3449|consensus
Probab=26.55 E-value=1.7e+02 Score=26.45 Aligned_cols=53 Identities=9% Similarity=0.281 Sum_probs=44.0
Q ss_pred HHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCCcccHHHHHH
Q psy14118 673 KSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYSGRDARISFDDFMM 729 (766)
Q Consensus 673 ~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~dd~dG~Is~~EF~~ 729 (766)
-.+|-+++.-++-..+..+++++|...|..+.++.++.++.... |+ +.+|.+.
T Consensus 4 vaAYLL~~lgGn~~psa~DikkIl~sVG~E~d~e~i~~visel~---GK-~i~ElIA 56 (112)
T KOG3449|consen 4 VAAYLLAVLGGNASPSASDIKKILESVGAEIDDERINLVLSELK---GK-DIEELIA 56 (112)
T ss_pred HHHHHHHHhcCCCCCCHHHHHHHHHHhCcccCHHHHHHHHHHhc---CC-CHHHHHH
Confidence 45677788888889999999999999999999999999999886 22 5566553
No 163
>PLN02230 phosphoinositide phospholipase C 4
Probab=26.19 E-value=2.1e+02 Score=33.88 Aligned_cols=30 Identities=20% Similarity=0.387 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHcCCCcccCHHHHHHHHHHH
Q psy14118 541 TEAIRQFFQKLAGDDMEVDWMELKDILDYA 570 (766)
Q Consensus 541 ~~~~r~~F~~~d~~~g~i~~~el~~~l~~~ 570 (766)
...++.+|.++.++++.++.++|.++|+..
T Consensus 28 ~~ei~~lf~~~s~~~~~mt~~~l~~FL~~~ 57 (598)
T PLN02230 28 VADVRDLFEKYADGDAHMSPEQLQKLMAEE 57 (598)
T ss_pred cHHHHHHHHHHhCCCCccCHHHHHHHHHHh
Confidence 456889999997555899999999999875
No 164
>PLN02228 Phosphoinositide phospholipase C
Probab=25.69 E-value=2.1e+02 Score=33.64 Aligned_cols=30 Identities=13% Similarity=0.288 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHcCCCcccCHHHHHHHHHHH
Q psy14118 540 KTEAIRQFFQKLAGDDMEVDWMELKDILDYA 570 (766)
Q Consensus 540 ~~~~~r~~F~~~d~~~g~i~~~el~~~l~~~ 570 (766)
-...++.+|.+++++ +.++.++|.++|+..
T Consensus 22 ~~~ei~~if~~~s~~-~~~t~~~~~~FL~~~ 51 (567)
T PLN02228 22 PPVSIKRLFEAYSRN-GKMSFDELLRFVSEV 51 (567)
T ss_pred CcHHHHHHHHHhcCC-CccCHHHHHHHHHHh
Confidence 345688899998743 579999999999775
No 165
>PF08976 DUF1880: Domain of unknown function (DUF1880); InterPro: IPR015070 This entry represents EF-hand calcium-binding domain-containing protein 6 that negatively regulates the androgen receptor by recruiting histone deacetylase complex, and protein DJ-1 antagonises this inhibition by abrogation of this complex [].; PDB: 1WLZ_C.
Probab=25.25 E-value=52 Score=29.97 Aligned_cols=33 Identities=15% Similarity=0.371 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH
Q psy14118 637 FSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI 669 (766)
Q Consensus 637 ~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~ 669 (766)
+++++.+.+.+.+-.|..|+|.|.||+.-+..-
T Consensus 4 LtDeQFdrLW~e~Pvn~~GrLkY~eFL~kfs~e 36 (118)
T PF08976_consen 4 LTDEQFDRLWNEMPVNAKGRLKYQEFLSKFSSE 36 (118)
T ss_dssp --HHHHHHHHTTS-B-TTS-EEHHHHHHHT---
T ss_pred ccHHHhhhhhhhCcCCccCCEeHHHHHHHcccc
Confidence 678999999999999999999999999877643
No 166
>PLN02230 phosphoinositide phospholipase C 4
Probab=24.48 E-value=1.8e+02 Score=34.52 Aligned_cols=62 Identities=15% Similarity=0.254 Sum_probs=30.7
Q ss_pred HHHHHhhhhcCCCCcccCHHHHHHHHHHhC-C--CCCHHHHHHHHHHcc--------CCCCcccHHHHHHHHHH
Q psy14118 671 NWKSVFKMYDQENSGYLSPFELRQALTSAG-Y--HLNNHILNILAHRYS--------GRDARISFDDFMMCAVR 733 (766)
Q Consensus 671 ~l~~~F~~~D~d~~G~Is~~El~~~L~~~g-~--~ls~~~~~~l~~~~d--------d~dG~Is~~EF~~~l~~ 733 (766)
+++.+|..|-.++ +.++.++|..+|.+.. . ..+.+.++.++..+- -+.+.++++.|..++..
T Consensus 30 ei~~lf~~~s~~~-~~mt~~~l~~FL~~~Q~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~F~~yL~s 102 (598)
T PLN02230 30 DVRDLFEKYADGD-AHMSPEQLQKLMAEEGGGEGETSLEEAERIVDEVLRRKHHIAKFTRRNLTLDDFNYYLFS 102 (598)
T ss_pred HHHHHHHHHhCCC-CccCHHHHHHHHHHhCCCcccCCHHHHHHHHHHHHhhccccccccccccCHHHHHHHHcC
Confidence 3444455543222 4555555555555543 1 224444444444331 12345888888877653
No 167
>PF07308 DUF1456: Protein of unknown function (DUF1456); InterPro: IPR009921 This domain occurs in several hypothetical bacterial proteins of around 150 residues in length. The function of this domain is unknown.
Probab=24.03 E-value=2.7e+02 Score=22.93 Aligned_cols=45 Identities=11% Similarity=0.046 Sum_probs=29.6
Q ss_pred cCHHHHHHHHHHhCCCCCHHHHHHHHHHcc-CCCCcccHHHHHHHH
Q psy14118 687 LSPFELRQALTSAGYHLNNHILNILAHRYS-GRDARISFDDFMMCA 731 (766)
Q Consensus 687 Is~~El~~~L~~~g~~ls~~~~~~l~~~~d-d~dG~Is~~EF~~~l 731 (766)
|+.+++..++...|+.++..++..+++.-+ .+--..+-+.+..++
T Consensus 14 l~d~~m~~if~l~~~~vs~~el~a~lrke~~~~y~~c~D~~L~~FL 59 (68)
T PF07308_consen 14 LKDDDMIEIFALAGFEVSKAELSAWLRKEDEKGYKECSDQLLRNFL 59 (68)
T ss_pred CChHHHHHHHHHcCCccCHHHHHHHHCCCCCccccccChHHHHHHH
Confidence 344678888888888888888888888766 333334444444433
No 168
>PF08414 NADPH_Ox: Respiratory burst NADPH oxidase; InterPro: IPR013623 This domain is found in plant proteins such as respiratory burst NADPH oxidase proteins which produce reactive oxygen species as a defence mechanism. It tends to occur to the N terminus of an EF-hand (IPR002048 from INTERPRO), which suggests a direct regulatory effect of Ca2+ on the activity of the NADPH oxidase in plants []. ; GO: 0004601 peroxidase activity, 0050664 oxidoreductase activity, acting on NADH or NADPH, oxygen as acceptor, 0055114 oxidation-reduction process; PDB: 3A8R_A.
Probab=23.57 E-value=2.1e+02 Score=25.47 Aligned_cols=59 Identities=12% Similarity=0.175 Sum_probs=35.8
Q ss_pred HHHHHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHcc----CCCCcccHHHHHHHHHHH
Q psy14118 671 NWKSVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYS----GRDARISFDDFMMCAVRL 734 (766)
Q Consensus 671 ~l~~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~d----d~dG~Is~~EF~~~l~~l 734 (766)
.++.-|..+-. +|+|...+|...+ |+.-+.+-..+||..+. -....|+.+|...+..++
T Consensus 31 ~VE~RFd~La~--dG~L~rs~Fg~CI---GM~dSkeFA~eLFdALaRrr~i~~~~I~k~eL~efW~qi 93 (100)
T PF08414_consen 31 EVEKRFDKLAK--DGLLPRSDFGECI---GMKDSKEFAGELFDALARRRGIKGDSITKDELKEFWEQI 93 (100)
T ss_dssp HHHHHHHHH-B--TTBEEGGGHHHHH---T--S-HHHHHHHHHHHHHHTT--SSEE-HHHHHHHHHHH
T ss_pred HHHHHHHHhCc--CCcccHHHHHHhc---CCcccHHHHHHHHHHHHHhcCCccCCcCHHHHHHHHHHh
Confidence 34555666655 7888888887654 66666777777777654 224578888877776554
No 169
>cd02620 Peptidase_C1A_CathepsinB Cathepsin B group; composed of cathepsin B and similar proteins, including tubulointerstitial nephritis antigen (TIN-Ag). Cathepsin B is a lysosomal papain-like cysteine peptidase which is expressed in all tissues and functions primarily as an exopeptidase through its carboxydipeptidyl activity. Together with other cathepsins, it is involved in the degradation of proteins, proenzyme activation, Ag processing, metabolism and apoptosis. Cathepsin B has been implicated in a number of human diseases such as cancer, rheumatoid arthritis, osteoporosis and Alzheimer's disease. The unique carboxydipeptidyl activity of cathepsin B is attributed to the presence of an occluding loop in its active site which favors the binding of the C-termini of substrate proteins. Some members of this group do not possess the occluding loop. TIN-Ag is an extracellular matrix basement protein which was originally identified as a target Ag involved in anti-tubular basement membrane
Probab=23.09 E-value=1.4e+02 Score=30.80 Aligned_cols=26 Identities=31% Similarity=0.502 Sum_probs=21.7
Q ss_pred CCceeEEeeEEEecccCCCCCCceeEEEEeCCCC
Q psy14118 176 KGHAYSITRIKYVDISTPNTSGKIPLIRMRNPWG 209 (766)
Q Consensus 176 ~~haYsv~~v~~~~~~~~~~~~~~~ll~lrNPWg 209 (766)
.+||=.|++..+- .+.+...|||.||
T Consensus 184 ~~HaV~iVGyg~~--------~g~~YWivrNSWG 209 (236)
T cd02620 184 GGHAVKIIGWGVE--------NGVPYWLAANSWG 209 (236)
T ss_pred CCeEEEEEEEecc--------CCeeEEEEEeCCC
Confidence 5799999998762 4578899999999
No 170
>PF12631 GTPase_Cys_C: Catalytic cysteine-containing C-terminus of GTPase, MnmE; PDB: 1XZQ_A 1XZP_A 2GJ8_D 3GEH_A 3GEI_B 3GEE_A.
Probab=22.84 E-value=2.8e+02 Score=22.92 Aligned_cols=56 Identities=20% Similarity=0.240 Sum_probs=37.2
Q ss_pred HHHHHHHHHHHHHHHHhhhhcCCCCcccCHHHHHHHHHHh----CCCCCHHHHHHHHHHc
Q psy14118 660 EEFQQLWKDIRNWKSVFKMYDQENSGYLSPFELRQALTSA----GYHLNNHILNILAHRY 715 (766)
Q Consensus 660 ~EF~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~----g~~ls~~~~~~l~~~~ 715 (766)
.....+-..+..+..+....+....--|-..+|+.++..+ |...+++.+..+|+.|
T Consensus 13 Rq~~~L~~a~~~l~~a~~~l~~~~~~dl~a~~L~~A~~~L~~ItG~~~~ediLd~IFs~F 72 (73)
T PF12631_consen 13 RQRQLLEQALEHLEDALEALENGLPLDLVAEDLREALESLGEITGEVVTEDILDNIFSNF 72 (73)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT--HHHHHHHHHHHHHHHHHHCTSS--HHHHHHHHCTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHhh
Confidence 3333444445777777877776655566778888888876 6777888899998875
No 171
>cd07313 terB_like_2 tellurium resistance terB-like protein, subgroup 2. This family includes several uncharacterized bacterial proteins. Protein sequence homology analysis shows they are similar to tellurium resistance protein terB, but the function of this family is unknown.
Probab=21.92 E-value=3.6e+02 Score=23.49 Aligned_cols=80 Identities=18% Similarity=0.147 Sum_probs=0.0
Q ss_pred CcccCHHHHHHHHHHHhhccccccccCCcccceeeccCCCCCCCCCCCCcchhhhHHHHhccccCCCCccccccccccCC
Q psy14118 555 DMEVDWMELKDILDYAMRNETKTTTEGGFSKDVCRNVPANTSTTDSPATGIVGNLLALICGNACRDTPLGAALETKTTTE 634 (766)
Q Consensus 555 ~g~i~~~el~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~ 634 (766)
||.++..|.+.+-.-+ ...
T Consensus 13 DG~v~~~E~~~i~~~l-------------------------------------------------------------~~~ 31 (104)
T cd07313 13 DGEYDEEERAAIDRLL-------------------------------------------------------------AER 31 (104)
T ss_pred cCCCCHHHHHHHHHHH-------------------------------------------------------------HHH
Q ss_pred CCCCHHHHHHHHHhhcCCCCccccHHHHHHHHHHH-------HHHHHHhhhhcCCCCcccCHHHHHHHHH
Q psy14118 635 GGFSKDVCRSMVAMLDVDRSGKLGFEEFQQLWKDI-------RNWKSVFKMYDQENSGYLSPFELRQALT 697 (766)
Q Consensus 635 ~~~s~~~i~~l~~~~D~d~~G~I~~~EF~~~~~~~-------~~l~~~F~~~D~d~~G~Is~~El~~~L~ 697 (766)
.+++.++...++..+........++.+|...+... .-+..++...-.| |.++..|-.-+-+
T Consensus 32 ~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~l~~L~~vA~AD--G~~~~~E~~~l~~ 99 (104)
T cd07313 32 FGLDAEEAAELLAEAEALEEEAPDLYEFTSLIKEHFDYEERLELVEALWEVAYAD--GELDEYEEHLIRR 99 (104)
T ss_pred hCcCHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhc--CCCCHHHHHHHHH
No 172
>PTZ00373 60S Acidic ribosomal protein P2; Provisional
Probab=21.55 E-value=2.3e+02 Score=25.84 Aligned_cols=52 Identities=10% Similarity=0.210 Sum_probs=41.4
Q ss_pred HHhhhhcCCCCcccCHHHHHHHHHHhCCCCCHHHHHHHHHHccCCCCcccHHHHHH
Q psy14118 674 SVFKMYDQENSGYLSPFELRQALTSAGYHLNNHILNILAHRYSGRDARISFDDFMM 729 (766)
Q Consensus 674 ~~F~~~D~d~~G~Is~~El~~~L~~~g~~ls~~~~~~l~~~~dd~dG~Is~~EF~~ 729 (766)
.++-+.-.-++..+|.+++.++|+..|..+....+..+++.+.. .+.+|.+.
T Consensus 7 aAYlL~~lgG~~~pTaddI~kIL~AaGveVd~~~~~l~~~~L~G----KdI~ELIa 58 (112)
T PTZ00373 7 AAYLMCVLGGNENPTKKEVKNVLSAVNADVEDDVLDNFFKSLEG----KTPHELIA 58 (112)
T ss_pred HHHHHHHHcCCCCCCHHHHHHHHHHcCCCccHHHHHHHHHHHcC----CCHHHHHH
Confidence 34555566677889999999999999999999999999998862 45666654
No 173
>PF12486 DUF3702: ImpA domain protein ; InterPro: IPR021069 This entry represents a conserved region located towards the C-terminal end of ImpA and related proteins. ImpA is an inner membrane protein, which has been suggested to be involved with proteins that are exported and associated with colony variations in Actinobacillus actinomycetemcomitans []. Note that many members are hypothetical proteins.
Probab=21.29 E-value=3.9e+02 Score=25.61 Aligned_cols=51 Identities=12% Similarity=0.225 Sum_probs=40.1
Q ss_pred hcCCCCccccHHHHHHHHHHHHHHHHHhhhhcCCCCcccCHHHHHHHHHHh
Q psy14118 649 LDVDRSGKLGFEEFQQLWKDIRNWKSVFKMYDQENSGYLSPFELRQALTSA 699 (766)
Q Consensus 649 ~D~d~~G~I~~~EF~~~~~~~~~l~~~F~~~D~d~~G~Is~~El~~~L~~~ 699 (766)
+.......-..+-+...+..++.+..-....|..+.+|||..||+.++-.+
T Consensus 48 l~~~a~~~~~l~gW~q~~~~Lq~L~~rL~~le~~rg~Y~TiSeLKT~vy~i 98 (148)
T PF12486_consen 48 LEARALPAPQLDGWHQGMTQLQQLADRLNQLEEQRGKYMTISELKTAVYQI 98 (148)
T ss_pred HHHhCCCchhhchHHHHHHHHHHHHHHHHHHHHhcCCceeHHHHHHHHHHH
Confidence 333333445666677788888999999999999999999999999887765
Done!