BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14121
(118 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3TZ89|SC31B_MOUSE Protein transport protein Sec31B OS=Mus musculus GN=Sec31b PE=1
SV=2
Length = 1158
Score = 46.2 bits (108), Expect = 5e-05, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 30/44 (68%), Gaps = 1/44 (2%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ 44
GG D+G + +YNV +++S + I K KH+G VRALDFN FQ
Sbjct: 90 GGGDNGTLTLYNVTHVLSSGKEPLIAQKQKHTGAVRALDFNPFQ 133
>sp|Q9NQW1|SC31B_HUMAN Protein transport protein Sec31B OS=Homo sapiens GN=SEC31B PE=1
SV=1
Length = 1179
Score = 45.4 bits (106), Expect = 1e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 1 MGGCDDGIIQMYNVDNIMS-GDNKVDILSKKHSGPVRALDFNKFQ 44
+GG D+G++ +YNV +I+S G V +KH+G VRALD N FQ
Sbjct: 89 VGGGDNGMLILYNVTHILSSGKEPVIAQKQKHTGAVRALDLNPFQ 133
>sp|Q9Z2Q1|SC31A_RAT Protein transport protein Sec31A OS=Rattus norvegicus GN=Sec31a
PE=1 SV=2
Length = 1249
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ 44
+ G ++G I +Y+ I++GD +V I K KH+GPVRALD N FQ
Sbjct: 90 IAGGENGNIILYDPSKIIAGDKEVVIAQKDKHTGPVRALDVNIFQ 134
>sp|Q3UPL0|SC31A_MOUSE Protein transport protein Sec31A OS=Mus musculus GN=Sec31a PE=1
SV=2
Length = 1230
Score = 44.7 bits (104), Expect = 2e-04, Method: Composition-based stats.
Identities = 22/45 (48%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ 44
+ G ++G I +Y+ I++GD +V I K KH+GPVRALD N FQ
Sbjct: 90 IAGGENGNIILYDPSKIIAGDKEVVIAQKDKHTGPVRALDVNIFQ 134
>sp|Q5F3X8|SC31A_CHICK Protein transport protein Sec31A OS=Gallus gallus GN=SEC31A PE=2
SV=1
Length = 1227
Score = 43.9 bits (102), Expect = 3e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSK-KHSGPVRALDFNKFQ 44
+ G ++G + +Y+ I++GD +V I K KH+GPVRALD N FQ
Sbjct: 90 IAGGENGNVILYDPAKIIAGDTEVIIAQKDKHTGPVRALDVNMFQ 134
>sp|Q7SYD5|SC31A_DANRE Protein transport protein Sec31A OS=Danio rerio GN=sec31a PE=2 SV=1
Length = 1254
Score = 43.1 bits (100), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDI-LSKKHSGPVRALDFNKFQ---VVATNFKIRAHL 56
+ G ++G I +Y+ I++GD++V I S+KH+G VRALD N FQ V + + ++
Sbjct: 90 IAGGENGNIILYDASKIIAGDSEVIISQSEKHTGAVRALDVNSFQSNLVASGGNESEIYI 149
Query: 57 WR-NLHHHFRVPGKKT 71
W N PG KT
Sbjct: 150 WDLNNFSSPMTPGPKT 165
>sp|Q5R4F4|SC31A_PONAB Protein transport protein Sec31A OS=Pongo abelii GN=SEC31A PE=2
SV=1
Length = 1106
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDIL-SKKHSGPVRALDFNKFQ 44
+ G ++G I +Y+ I++GD +V I + KH+GPVRALD N FQ
Sbjct: 90 IAGGENGNIILYDPSKIIAGDKEVVIAQNDKHTGPVRALDVNIFQ 134
>sp|O94979|SC31A_HUMAN Protein transport protein Sec31A OS=Homo sapiens GN=SEC31A PE=1
SV=3
Length = 1220
Score = 42.7 bits (99), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/45 (46%), Positives = 31/45 (68%), Gaps = 1/45 (2%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDIL-SKKHSGPVRALDFNKFQ 44
+ G ++G I +Y+ I++GD +V I + KH+GPVRALD N FQ
Sbjct: 90 IAGGENGNIILYDPSKIIAGDKEVVIAQNDKHTGPVRALDVNIFQ 134
>sp|Q2GVT8|SEC31_CHAGB Protein transport protein SEC31 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=SEC31 PE=3 SV=1
Length = 1258
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKF--QVVAT 48
G +DG +Q+++ +++G+ V KH+GP++AL FN QV+AT
Sbjct: 89 GAMEDGSLQLWDAAKLLAGEEAVMSRDTKHTGPIKALQFNPLRPQVLAT 137
>sp|Q873A1|SEC31_NEUCR Protein transport protein sec31 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=sec31 PE=3 SV=1
Length = 1256
Score = 37.7 bits (86), Expect = 0.019, Method: Composition-based stats.
Identities = 15/49 (30%), Positives = 33/49 (67%), Gaps = 2/49 (4%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKF--QVVAT 48
G ++G + +++ + +++G++ + + KH+GP++AL FN QV+AT
Sbjct: 89 GAMENGSLDLWDAEKLIAGEDALISRTTKHTGPIKALQFNPLRPQVLAT 137
>sp|Q6NV31|WDR82_DANRE WD repeat-containing protein 82 OS=Danio rerio GN=wdr82 PE=2 SV=1
Length = 313
Score = 35.4 bits (80), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFN-KFQVVAT 48
M G +DG I ++N ++ M KV +L KH+GPV L FN KF A+
Sbjct: 255 MIGSEDGKIHVWNAESGM----KVALLDGKHTGPVTCLQFNPKFMTFAS 299
>sp|Q640J6|WD82A_XENLA WD repeat-containing protein 82-A OS=Xenopus laevis GN=wdr82-a PE=2
SV=1
Length = 313
Score = 35.4 bits (80), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFN-KFQVVAT 48
M G +DG I ++N ++ M KV +L KH+GP+ L FN KF A+
Sbjct: 255 MIGSEDGKIHVWNCESGM----KVAVLDGKHTGPITCLQFNPKFMTFAS 299
>sp|Q58E77|WD82B_XENLA WD repeat-containing protein 82-B OS=Xenopus laevis GN=wdr82-b PE=2
SV=1
Length = 313
Score = 35.4 bits (80), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFN-KFQVVAT 48
M G +DG I ++N ++ M KV +L KH+GP+ L FN KF A+
Sbjct: 255 MIGSEDGKIHVWNCESGM----KVAVLDGKHTGPITCLQFNPKFMTFAS 299
>sp|Q5AZM3|SEC31_EMENI Protein transport protein sec31 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=sec31
PE=3 SV=2
Length = 1282
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFN 41
GG + G + +++ D ++SG + +LSK KHSG ++AL FN
Sbjct: 89 GGLESGSLGLWDADKLLSGASDA-VLSKSSKHSGAIKALQFN 129
>sp|Q4P2B6|SEC31_USTMA Protein transport protein SEC31 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=SEC31 PE=3 SV=1
Length = 1416
Score = 35.0 bits (79), Expect = 0.15, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVD---ILSKKHSGPVRALDFNKFQ 44
G ++G + +++ D +++ + D I + H+GPVR LDFN Q
Sbjct: 94 AGLENGELGIWDADKVLAAAAESDAQVIKNTTHTGPVRGLDFNPLQ 139
>sp|Q1DX43|SEC31_COCIM Protein transport protein SEC31 OS=Coccidioides immitis (strain RS)
GN=SEC31 PE=3 SV=1
Length = 1261
Score = 34.3 bits (77), Expect = 0.22, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDILS-KKHSGPVRALDFN 41
G ++G + +++ D +++G + I S KH+GP++AL FN
Sbjct: 89 GALENGSLDLWDADKLLNGASDALISSASKHTGPIKALQFN 129
>sp|A2QBZ0|SEC31_ASPNC Protein transport protein sec31 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=sec31 PE=3 SV=1
Length = 1259
Score = 34.3 bits (77), Expect = 0.24, Method: Composition-based stats.
Identities = 15/41 (36%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 2 GGCDDGIIQMYNVDNIMSG-DNKVDILSKKHSGPVRALDFN 41
G ++G + +++ D +++G D+ V + KHSG V+AL FN
Sbjct: 89 GALENGSLDLWDADKLLNGSDDAVISRTSKHSGAVKALQFN 129
>sp|Q5ZMV7|WDR82_CHICK WD repeat-containing protein 82 OS=Gallus gallus GN=WDR82 PE=2 SV=1
Length = 313
Score = 33.9 bits (76), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFN-KFQVVAT 48
M G +DG I ++N ++ M KV +L KH+GP+ L FN KF A+
Sbjct: 255 MIGSEDGKIHVWNGESGM----KVAVLDGKHTGPITCLQFNPKFMTFAS 299
>sp|Q6GL39|WDR82_XENTR WD repeat-containing protein 82 OS=Xenopus tropicalis GN=wdr82 PE=2
SV=1
Length = 313
Score = 33.9 bits (76), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 25/41 (60%), Gaps = 4/41 (9%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFN 41
M G +DG I ++N ++ M KV +L KH+GP+ L FN
Sbjct: 255 MIGSEDGKIHVWNCESGM----KVAVLDGKHTGPITCLQFN 291
>sp|Q5S580|SEC31_AJECA Protein transport protein SEC31 OS=Ajellomyces capsulatus GN=SEC31
PE=1 SV=1
Length = 1273
Score = 33.9 bits (76), Expect = 0.32, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 2 GGCDDGIIQMYNVDNIMSG-DNKVDILSKKHSGPVRALDFN 41
G ++G + ++N D ++SG + + + +HSGPV+ L FN
Sbjct: 89 GALENGSLDLWNADKLLSGASDPLVSRASQHSGPVKTLQFN 129
>sp|Q0ULF5|SEC31_PHANO Protein transport protein SEC31 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=SEC31 PE=3 SV=3
Length = 1256
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 2 GGCDDGIIQMYNVDNIMSG--DNKVDILSKKHSGPVRALDFNKFQ 44
G D G + +++ + + +G D ++D + K H+GP++A+ FN F+
Sbjct: 90 GALDSGALVLWDAEKLRTGASDAQIDQIDK-HTGPIQAIQFNPFR 133
>sp|Q6C414|SEC31_YARLI Protein transport protein SEC31 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SEC31 PE=3 SV=1
Length = 1184
Score = 33.5 bits (75), Expect = 0.44, Method: Composition-based stats.
Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDF---NKFQVVATNFKIRAHLW 57
+G + G ++++ DNI V + K+HSGP++ L F N ++V+ K +W
Sbjct: 85 VGATESGSLEVWEADNIKDSSTSVSV--KEHSGPIKTLQFDPHNPTRLVSGGTKGEIFVW 142
>sp|A5DB75|SEC31_PICGU Protein transport protein SEC31 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=SEC31 PE=3 SV=2
Length = 1266
Score = 33.5 bits (75), Expect = 0.45, Method: Composition-based stats.
Identities = 16/46 (34%), Positives = 27/46 (58%), Gaps = 3/46 (6%)
Query: 2 GGCDDGIIQMYNVDNIMSGDN--KVDIL-SKKHSGPVRALDFNKFQ 44
G ++G I++++V +++ + K I S HSGPV+ L FN Q
Sbjct: 84 GAFENGTIELWDVQELITSKDLQKASIFKSSAHSGPVKTLQFNPLQ 129
>sp|Q2UF60|SEC31_ASPOR Protein transport protein sec31 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=sec31 PE=3 SV=2
Length = 1273
Score = 32.7 bits (73), Expect = 0.64, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 2/42 (4%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFN 41
G + G + +++ D +++G + ++S+ KHSG ++AL FN
Sbjct: 89 GALESGSLDLWDADKLINGSSDDAVISRTSKHSGAIKALQFN 130
>sp|Q0CYG9|SEC31_ASPTN Protein transport protein sec31 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=sec31 PE=3 SV=1
Length = 1247
Score = 32.3 bits (72), Expect = 0.94, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 2 GGCDDGIIQMYNVDNIMSGD-NKVDILSKKHSGPVRALDFN 41
G ++G + +++ D +++G + V S KHSG ++AL FN
Sbjct: 89 GALENGSLDLWDADKLLNGSSDSVISRSTKHSGAIKALQFN 129
>sp|Q8BFQ4|WDR82_MOUSE WD repeat-containing protein 82 OS=Mus musculus GN=Wdr82 PE=1 SV=1
Length = 313
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFN-KFQVVAT 48
M G +DG I ++N ++ + KV +L KH+GP+ L FN KF A+
Sbjct: 255 MIGSEDGKIHVWNGESGI----KVAVLDGKHTGPITCLQFNPKFMTFAS 299
>sp|Q6UXN9|WDR82_HUMAN WD repeat-containing protein 82 OS=Homo sapiens GN=WDR82 PE=1 SV=1
Length = 313
Score = 32.3 bits (72), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 5/49 (10%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFN-KFQVVAT 48
M G +DG I ++N ++ + KV +L KH+GP+ L FN KF A+
Sbjct: 255 MIGSEDGKIHVWNGESGI----KVAVLDGKHTGPITCLQFNPKFMTFAS 299
>sp|Q54N86|FBXAL_DICDI F-box/WD repeat-containing protein A-like protein OS=Dictyostelium
discoideum GN=DDB_G0285445 PE=3 SV=1
Length = 1178
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 30/58 (51%), Gaps = 6/58 (10%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDF-NKFQVVATNFKIRAHLW 57
M C D ++++++D+ NK +++ H G V LDF N +Q++ + +W
Sbjct: 1038 MIACTDKTVKLWDIDS-----NKTELVLNGHKGSVNCLDFLNDYQLITGSSDKTIRMW 1090
>sp|A3GFK8|SEC31_PICST Protein transport protein SEC31 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=SEC31 PE=3 SV=2
Length = 1244
Score = 31.6 bits (70), Expect = 1.4, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 28/43 (65%), Gaps = 3/43 (6%)
Query: 5 DDGIIQMYNVDN-IMSGD-NKVDI-LSKKHSGPVRALDFNKFQ 44
++G+I+ ++ + I+S D K + S KHSGPVR+L FN Q
Sbjct: 88 ENGVIEFWDAEVLIISKDLAKASVHKSSKHSGPVRSLQFNPLQ 130
>sp|A1C6X5|SEC31_ASPCL Protein transport protein sec31 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=sec31 PE=3 SV=1
Length = 1276
Score = 31.6 bits (70), Expect = 1.7, Method: Composition-based stats.
Identities = 14/42 (33%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFN 41
G ++G + +++ D +++G + I+S+ KHSG ++AL FN
Sbjct: 89 GALENGSLDLWDADKLINGSSDA-IISRMTKHSGAIKALQFN 129
>sp|Q55CT5|SEC31_DICDI Protein transport protein SEC31 OS=Dictyostelium discoideum
GN=sec31 PE=3 SV=1
Length = 1355
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 10/50 (20%)
Query: 2 GGCDDGIIQMYNVDNIMSGD----------NKVDILSKKHSGPVRALDFN 41
G D+G I +++ I++ D + + + ++HSGPV+++DFN
Sbjct: 89 GAMDNGTINLWDPTKILASDATDGGGSDDQSSLIGVGQRHSGPVQSIDFN 138
>sp|A1DHK2|SEC31_NEOFI Protein transport protein sec31 OS=Neosartorya fischeri (strain
ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=sec31
PE=3 SV=1
Length = 1263
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFN 41
G ++G + +++ D +++G + ++S+ KHSG ++AL FN
Sbjct: 89 GALENGSLDLWDADKLINGSSDA-VISRMTKHSGAIKALQFN 129
>sp|Q4X0M4|SEC31_ASPFU Protein transport protein sec31 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=sec31 PE=3 SV=1
Length = 1263
Score = 30.8 bits (68), Expect = 2.6, Method: Composition-based stats.
Identities = 13/42 (30%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFN 41
G ++G + +++ D +++G + ++S+ KHSG ++AL FN
Sbjct: 89 GALENGSLDLWDADKLINGSSDA-VISRMTKHSGAIKALQFN 129
>sp|A4RD35|SEC31_MAGO7 Protein transport protein SEC31 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=SEC31 PE=3 SV=1
Length = 1269
Score = 30.8 bits (68), Expect = 2.9, Method: Composition-based stats.
Identities = 14/50 (28%), Positives = 32/50 (64%), Gaps = 3/50 (6%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDI-LSKKHSGPVRALDFN--KFQVVAT 48
G ++G + +++ + ++SG + + + KH+G +++L FN K Q++AT
Sbjct: 90 GALENGSLDLWDAEKLLSGASDAHMSRTTKHTGAIKSLQFNPLKPQILAT 139
>sp|Q54ED4|GRWD1_DICDI Glutamate-rich WD repeat-containing protein 1 OS=Dictyostelium
discoideum GN=grwd1 PE=3 SV=1
Length = 482
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 14/60 (23%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 1 MGGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKF---QVVATNFKIRAHLW 57
+ GCDDG +++++ D K H+GP+ ++++N + QV+ ++ + +W
Sbjct: 356 VSGCDDGSFRVWDLRAFKDNSPVSDF--KYHTGPITSIEWNPYEESQVIVSSSDDQVTIW 413
>sp|O75037|KI21B_HUMAN Kinesin-like protein KIF21B OS=Homo sapiens GN=KIF21B PE=1 SV=2
Length = 1637
Score = 29.3 bits (64), Expect = 6.8, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 7/58 (12%)
Query: 1 MGGCDDGIIQMYNVDNIMS-GDNKVDILSKKHSGPVRALDFNKFQVVATNFKIRAHLW 57
+ C G+I+++NVDN G+ K H P+ A+ N + + R LW
Sbjct: 1561 LSACRAGVIKVWNVDNFTPIGE------IKGHDSPINAICTNAKHIFTASSDCRVKLW 1612
>sp|Q6BRR2|SEC31_DEBHA Protein transport protein SEC31 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SEC31 PE=3 SV=2
Length = 1265
Score = 29.3 bits (64), Expect = 7.7, Method: Composition-based stats.
Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Query: 2 GGCDDGIIQMYNVDNIMSGD--NKVDI-LSKKHSGPVRALDFNKFQ 44
G ++G+++ ++ + ++ NK + KHSGPV+ L FN Q
Sbjct: 85 GAFENGVVEFWDAEVLIKSKDLNKASVHKGTKHSGPVKTLSFNPNQ 130
>sp|Q54WS5|ROCO6_DICDI Probable serine/threonine-protein kinase roco6 OS=Dictyostelium
discoideum GN=roco6 PE=3 SV=1
Length = 2147
Score = 28.9 bits (63), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 14/37 (37%), Positives = 22/37 (59%), Gaps = 4/37 (10%)
Query: 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRAL 38
GGC+ G I ++N +N N++ K H GP+R+L
Sbjct: 1754 GGCESGEIIVWNAEN----GNQIFREQKLHPGPIRSL 1786
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.140 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,467,108
Number of Sequences: 539616
Number of extensions: 1811431
Number of successful extensions: 3517
Number of sequences better than 100.0: 38
Number of HSP's better than 100.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 3500
Number of HSP's gapped (non-prelim): 39
length of query: 118
length of database: 191,569,459
effective HSP length: 85
effective length of query: 33
effective length of database: 145,702,099
effective search space: 4808169267
effective search space used: 4808169267
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)