Query psy14121
Match_columns 118
No_of_seqs 104 out of 160
Neff 3.4
Searched_HMMs 29240
Date Fri Aug 16 20:06:52 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14121.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14121hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4gqb_B Methylosome protein 50; 97.8 8E-06 2.7E-10 62.7 3.2 61 2-70 275-340 (344)
2 2pm9_A Protein WEB1, protein t 97.8 3.4E-05 1.2E-09 56.8 5.7 79 2-84 84-176 (416)
3 4e54_B DNA damage-binding prot 97.6 3E-05 1E-09 59.8 2.9 51 2-57 137-192 (435)
4 3k26_A Polycomb protein EED; W 97.5 5.4E-05 1.9E-09 54.2 3.5 75 2-83 90-171 (366)
5 4g56_B MGC81050 protein; prote 97.5 3.9E-05 1.3E-09 58.3 2.9 48 2-57 287-339 (357)
6 4e54_B DNA damage-binding prot 97.4 0.00028 9.7E-09 54.3 5.6 48 2-57 226-278 (435)
7 4ggc_A P55CDC, cell division c 97.3 0.00021 7E-09 50.5 4.0 49 2-57 259-311 (318)
8 3lrv_A PRE-mRNA-splicing facto 97.3 0.00033 1.1E-08 51.9 5.2 49 2-57 187-240 (343)
9 2oit_A Nucleoporin 214KDA; NH2 97.3 0.00018 6E-09 57.3 3.9 77 2-83 113-202 (434)
10 4gqb_B Methylosome protein 50; 97.2 0.00026 9E-09 54.2 4.2 49 2-57 144-197 (344)
11 4ggc_A P55CDC, cell division c 97.2 0.0002 7E-09 50.5 2.7 47 6-57 44-94 (318)
12 4gga_A P55CDC, cell division c 97.1 0.00021 7.1E-09 54.6 2.7 72 3-83 122-199 (420)
13 4g56_B MGC81050 protein; prote 97.1 0.0007 2.4E-08 51.3 5.4 49 2-57 156-209 (357)
14 3mmy_A MRNA export factor; mRN 97.1 0.00021 7.3E-09 50.9 2.2 71 2-81 59-135 (368)
15 3fm0_A Protein CIAO1; WDR39,SG 97.1 0.00035 1.2E-08 52.3 3.4 54 2-57 269-331 (345)
16 3ei3_B DNA damage-binding prot 97.1 0.00025 8.7E-09 52.4 2.5 51 2-57 91-146 (383)
17 2xzm_R RACK1; ribosome, transl 97.0 0.00056 1.9E-08 50.8 4.3 49 2-57 93-145 (343)
18 3vl1_A 26S proteasome regulato 97.0 0.00042 1.4E-08 51.4 3.4 71 2-82 114-190 (420)
19 2aq5_A Coronin-1A; WD40 repeat 97.0 0.00036 1.2E-08 52.5 3.0 79 2-83 99-186 (402)
20 1got_B GT-beta; complex (GTP-b 97.0 0.00037 1.3E-08 51.9 3.0 49 2-57 287-339 (340)
21 4gga_A P55CDC, cell division c 97.0 0.00041 1.4E-08 53.0 3.2 49 2-57 339-391 (420)
22 3gre_A Serine/threonine-protei 97.0 0.0004 1.4E-08 52.3 3.0 54 2-57 81-138 (437)
23 2xyi_A Probable histone-bindin 97.0 0.00063 2.2E-08 52.4 4.1 75 2-83 249-331 (430)
24 4aow_A Guanine nucleotide-bind 97.0 0.00031 1.1E-08 50.0 2.2 53 3-57 57-113 (340)
25 4gq1_A NUP37; propeller, trans 96.9 0.00012 4E-09 56.2 -0.2 54 2-57 106-171 (393)
26 2xzm_R RACK1; ribosome, transl 96.9 0.00063 2.1E-08 50.6 3.7 70 3-83 190-265 (343)
27 1sq9_A Antiviral protein SKI8; 96.9 0.00044 1.5E-08 50.7 2.8 54 2-57 31-96 (397)
28 3ei3_B DNA damage-binding prot 96.9 0.00056 1.9E-08 50.6 3.3 71 2-83 180-260 (383)
29 4gq1_A NUP37; propeller, trans 96.9 0.00033 1.1E-08 53.7 2.0 49 2-57 161-214 (393)
30 3zwl_B Eukaryotic translation 96.9 0.00062 2.1E-08 48.5 3.2 49 2-57 49-101 (369)
31 2aq5_A Coronin-1A; WD40 repeat 96.9 0.00069 2.4E-08 50.9 3.6 53 2-57 52-109 (402)
32 3vl1_A 26S proteasome regulato 96.9 0.00054 1.8E-08 50.8 2.8 49 2-57 156-208 (420)
33 4h5i_A Guanine nucleotide-exch 96.9 0.0006 2E-08 52.0 3.1 50 2-58 286-340 (365)
34 1got_B GT-beta; complex (GTP-b 96.8 0.00065 2.2E-08 50.6 3.2 49 2-57 201-253 (340)
35 3ow8_A WD repeat-containing pr 96.8 0.0006 2.1E-08 51.0 2.9 51 2-59 265-319 (321)
36 2pm7_B Protein transport prote 96.8 0.00055 1.9E-08 50.0 2.6 51 2-57 26-82 (297)
37 3dwl_C Actin-related protein 2 96.8 0.00061 2.1E-08 49.9 2.8 74 2-83 28-110 (377)
38 3f3f_A Nucleoporin SEH1; struc 96.8 0.00042 1.5E-08 48.3 1.7 30 26-57 300-333 (351)
39 2ymu_A WD-40 repeat protein; u 96.8 0.0006 2E-08 52.9 2.7 48 3-58 34-85 (577)
40 3odt_A Protein DOA1; ubiquitin 96.8 0.0011 3.9E-08 46.4 3.8 71 2-82 34-113 (313)
41 2ynn_A Coatomer subunit beta'; 96.8 0.00072 2.5E-08 49.5 2.8 49 2-57 72-124 (304)
42 4ery_A WD repeat-containing pr 96.8 0.00097 3.3E-08 48.1 3.4 49 2-57 82-134 (312)
43 3f3f_A Nucleoporin SEH1; struc 96.7 0.00071 2.4E-08 47.2 2.4 52 2-57 28-86 (351)
44 1vyh_C Platelet-activating fac 96.7 0.0014 4.8E-08 50.4 4.2 73 2-84 313-391 (410)
45 2ymu_A WD-40 repeat protein; u 96.7 0.00088 3E-08 52.0 2.9 48 2-57 525-576 (577)
46 4aow_A Guanine nucleotide-bind 96.7 0.00063 2.2E-08 48.4 2.0 52 2-57 9-66 (340)
47 2ynn_A Coatomer subunit beta'; 96.7 0.00089 3E-08 49.0 2.7 49 2-57 203-255 (304)
48 3bg1_A Protein SEC13 homolog; 96.7 0.00092 3.1E-08 49.4 2.8 50 3-57 77-132 (316)
49 4aez_A CDC20, WD repeat-contai 96.6 0.00092 3.1E-08 50.6 2.7 71 3-83 235-313 (401)
50 3frx_A Guanine nucleotide-bind 96.6 0.00091 3.1E-08 49.5 2.6 49 2-57 171-223 (319)
51 2pbi_B Guanine nucleotide-bind 96.6 0.0011 3.7E-08 50.1 3.0 49 2-57 301-353 (354)
52 3jrp_A Fusion protein of prote 96.6 0.00076 2.6E-08 48.4 2.1 74 2-83 74-157 (379)
53 2hes_X YDR267CP; beta-propelle 96.6 0.00083 2.8E-08 49.9 2.1 54 2-57 75-134 (330)
54 3jrp_A Fusion protein of prote 96.6 0.0012 4.2E-08 47.3 2.7 54 2-57 226-283 (379)
55 3mkq_A Coatomer beta'-subunit; 96.5 0.0012 4E-08 53.6 2.7 72 2-83 30-107 (814)
56 3v7d_B Cell division control p 96.5 0.0013 4.5E-08 49.9 2.6 71 2-82 137-212 (464)
57 1vyh_C Platelet-activating fac 96.5 0.0014 4.8E-08 50.5 2.8 49 2-57 125-177 (410)
58 3jro_A Fusion protein of prote 96.5 0.0011 3.7E-08 55.9 2.3 75 2-84 26-110 (753)
59 2pm7_B Protein transport prote 96.5 0.0015 5E-08 47.7 2.7 54 2-57 224-281 (297)
60 4ery_A WD repeat-containing pr 96.5 0.002 6.8E-08 46.4 3.4 49 2-57 254-308 (312)
61 2pm9_A Protein WEB1, protein t 96.5 0.0015 5.2E-08 48.0 2.8 49 2-57 280-333 (416)
62 1gxr_A ESG1, transducin-like e 96.5 0.0019 6.6E-08 45.5 3.2 48 6-57 71-124 (337)
63 2xyi_A Probable histone-bindin 96.4 0.0017 5.9E-08 50.0 3.1 54 2-57 146-209 (430)
64 3i2n_A WD repeat-containing pr 96.4 0.0016 5.5E-08 46.5 2.7 54 2-57 277-349 (357)
65 3odt_A Protein DOA1; ubiquitin 96.4 0.0017 5.8E-08 45.5 2.7 48 2-58 119-171 (313)
66 3dm0_A Maltose-binding peripla 96.4 0.0023 7.9E-08 52.4 3.8 75 2-83 447-527 (694)
67 3k26_A Polycomb protein EED; W 96.4 0.0014 4.8E-08 46.8 2.2 51 2-57 304-362 (366)
68 3bg1_A Protein SEC13 homolog; 96.4 0.0021 7.1E-08 47.5 3.1 53 2-57 233-289 (316)
69 3ow8_A WD repeat-containing pr 96.4 0.0018 6.3E-08 48.3 2.9 72 2-83 223-300 (321)
70 1erj_A Transcriptional repress 96.4 0.0018 6.2E-08 49.3 2.8 49 2-57 140-192 (393)
71 3frx_A Guanine nucleotide-bind 96.3 0.0019 6.6E-08 47.7 2.7 49 2-57 82-134 (319)
72 2pbi_B Guanine nucleotide-bind 96.3 0.0023 8E-08 48.3 3.2 49 2-57 215-267 (354)
73 3iz6_a 40S ribosomal protein R 96.3 0.002 6.9E-08 48.8 2.8 50 2-57 223-276 (380)
74 4a11_B DNA excision repair pro 96.3 0.0037 1.3E-07 45.3 3.8 49 2-57 161-214 (408)
75 4aez_A CDC20, WD repeat-contai 96.2 0.0028 9.7E-08 47.9 3.3 72 3-83 192-269 (401)
76 1yfq_A Cell cycle arrest prote 96.2 0.003 1E-07 45.1 3.2 71 2-84 74-161 (342)
77 3vu4_A KMHSV2; beta-propeller 96.2 0.0025 8.5E-08 48.1 2.9 77 3-83 155-250 (355)
78 3lrv_A PRE-mRNA-splicing facto 96.2 0.0047 1.6E-07 45.6 4.3 72 3-83 145-224 (343)
79 2hes_X YDR267CP; beta-propelle 96.2 0.0026 8.9E-08 47.2 2.9 52 2-57 124-180 (330)
80 3i2n_A WD repeat-containing pr 96.2 0.0017 5.8E-08 46.4 1.7 54 2-57 229-287 (357)
81 3vu4_A KMHSV2; beta-propeller 96.2 0.0026 8.7E-08 48.1 2.7 49 2-57 212-267 (355)
82 1r5m_A SIR4-interacting protei 96.1 0.0026 8.8E-08 46.2 2.5 77 2-83 63-159 (425)
83 3fm0_A Protein CIAO1; WDR39,SG 96.1 0.0026 9E-08 47.5 2.6 51 2-57 78-132 (345)
84 1r5m_A SIR4-interacting protei 96.1 0.003 1E-07 45.8 2.8 48 2-57 125-176 (425)
85 4a11_B DNA excision repair pro 96.1 0.0035 1.2E-07 45.4 3.0 54 2-57 61-127 (408)
86 3gre_A Serine/threonine-protei 96.1 0.003 1E-07 47.5 2.6 49 2-57 187-241 (437)
87 1yfq_A Cell cycle arrest prote 96.1 0.0045 1.5E-07 44.2 3.4 76 2-83 28-111 (342)
88 1p22_A F-BOX/WD-repeat protein 96.0 0.0028 9.7E-08 48.4 2.4 54 2-57 351-410 (435)
89 3iz6_a 40S ribosomal protein R 96.0 0.0031 1.1E-07 47.7 2.6 51 2-57 315-371 (380)
90 1gxr_A ESG1, transducin-like e 96.0 0.0036 1.2E-07 44.1 2.8 48 3-57 159-210 (337)
91 1pgu_A Actin interacting prote 96.0 0.0056 1.9E-07 47.2 4.0 73 2-84 505-595 (615)
92 1k8k_C P40, ARP2/3 complex 41 96.0 0.0031 1E-07 45.5 2.3 51 2-57 25-79 (372)
93 3dw8_B Serine/threonine-protei 95.9 0.0033 1.1E-07 46.8 2.2 47 5-57 196-254 (447)
94 3dm0_A Maltose-binding peripla 95.9 0.0036 1.2E-07 51.2 2.6 53 2-57 400-457 (694)
95 3mmy_A MRNA export factor; mRN 95.9 0.0039 1.3E-07 44.3 2.5 48 2-57 103-156 (368)
96 3v7d_B Cell division control p 95.7 0.0055 1.9E-07 46.4 2.8 49 2-57 178-232 (464)
97 3zwl_B Eukaryotic translation 95.7 0.0055 1.9E-07 43.6 2.7 49 3-57 193-245 (369)
98 3dw8_B Serine/threonine-protei 95.7 0.0042 1.4E-07 46.2 2.0 54 2-57 45-122 (447)
99 4h5i_A Guanine nucleotide-exch 95.7 0.0051 1.8E-07 46.8 2.4 48 2-57 152-202 (365)
100 2j04_B YDR362CP, TAU91; beta p 95.7 0.0061 2.1E-07 50.4 3.0 50 2-58 372-425 (524)
101 3dwl_C Actin-related protein 2 95.6 0.0066 2.3E-07 44.4 2.7 76 2-83 72-156 (377)
102 1sq9_A Antiviral protein SKI8; 95.5 0.0074 2.5E-07 44.1 2.7 48 3-57 251-318 (397)
103 2j04_B YDR362CP, TAU91; beta p 95.5 0.01 3.5E-07 49.1 3.7 60 2-64 230-301 (524)
104 1nr0_A Actin interacting prote 95.4 0.0077 2.6E-07 48.9 2.8 49 2-57 165-217 (611)
105 1k8k_C P40, ARP2/3 complex 41 95.4 0.0064 2.2E-07 43.8 2.0 49 2-57 219-270 (372)
106 1erj_A Transcriptional repress 95.4 0.0095 3.3E-07 45.3 3.0 49 2-57 327-385 (393)
107 1nr0_A Actin interacting prote 95.1 0.019 6.4E-07 46.7 4.2 73 2-82 508-590 (611)
108 2ovr_B FBW7, F-BOX/WD repeat p 95.0 0.013 4.4E-07 44.6 2.8 49 2-57 134-184 (445)
109 3mkq_A Coatomer beta'-subunit; 94.9 0.014 4.8E-07 47.3 2.9 49 2-57 72-124 (814)
110 3jro_A Fusion protein of prote 94.9 0.014 4.6E-07 49.2 2.9 54 2-57 224-281 (753)
111 3sfz_A APAF-1, apoptotic pepti 94.9 0.014 4.7E-07 50.3 2.8 49 2-57 632-684 (1249)
112 1pgu_A Actin interacting prote 94.8 0.023 7.7E-07 43.9 3.7 73 3-82 179-262 (615)
113 1p22_A F-BOX/WD-repeat protein 94.5 0.02 6.9E-07 43.7 2.6 72 2-83 148-223 (435)
114 2oit_A Nucleoporin 214KDA; NH2 94.4 0.016 5.5E-07 46.0 2.1 76 2-84 167-251 (434)
115 2ojh_A Uncharacterized protein 94.4 0.053 1.8E-06 36.9 4.3 47 3-57 18-67 (297)
116 2ovr_B FBW7, F-BOX/WD repeat p 94.2 0.029 9.9E-07 42.6 3.0 74 3-83 295-372 (445)
117 2w18_A PALB2, fancn, partner a 93.8 0.023 7.8E-07 47.0 2.0 49 2-57 300-353 (356)
118 2oaj_A Protein SNI1; WD40 repe 93.8 0.031 1.1E-06 48.9 2.8 47 2-57 34-84 (902)
119 2oaj_A Protein SNI1; WD40 repe 93.7 0.029 1E-06 49.0 2.5 54 2-57 452-515 (902)
120 2j04_A TAU60, YPL007P, hypothe 93.7 0.057 1.9E-06 47.4 4.3 73 2-85 102-194 (588)
121 3sfz_A APAF-1, apoptotic pepti 93.5 0.039 1.3E-06 47.5 2.9 49 2-57 718-770 (1249)
122 2vdu_B TRNA (guanine-N(7)-)-me 92.9 0.068 2.3E-06 41.0 3.2 47 3-57 216-267 (450)
123 2vdu_B TRNA (guanine-N(7)-)-me 92.5 0.062 2.1E-06 41.3 2.4 53 2-57 120-176 (450)
124 3bws_A Protein LP49; two-domai 92.2 0.1 3.6E-06 38.7 3.2 49 2-57 186-239 (433)
125 3bws_A Protein LP49; two-domai 90.3 0.066 2.3E-06 39.8 0.6 51 2-57 139-196 (433)
126 1l0q_A Surface layer protein; 89.3 0.23 7.8E-06 36.4 2.8 48 2-57 7-59 (391)
127 1l0q_A Surface layer protein; 87.8 0.37 1.3E-05 35.2 3.1 48 2-57 49-101 (391)
128 1ri6_A Putative isomerase YBHE 86.5 0.31 1.1E-05 34.3 1.9 50 3-57 11-65 (343)
129 2j04_A TAU60, YPL007P, hypothe 86.3 0.31 1E-05 42.8 2.2 75 2-82 146-235 (588)
130 1ri6_A Putative isomerase YBHE 75.7 0.71 2.4E-05 32.5 0.5 50 3-57 102-156 (343)
131 2hqs_A Protein TOLB; TOLB, PAL 73.9 2.7 9.1E-05 32.5 3.4 43 7-57 159-208 (415)
132 3u4y_A Uncharacterized protein 67.7 3.8 0.00013 29.0 2.8 47 3-57 16-67 (331)
133 1pby_B Quinohemoprotein amine 63.8 3.6 0.00012 28.7 2.0 47 3-57 7-61 (337)
134 2hqs_A Protein TOLB; TOLB, PAL 63.5 12 0.0004 28.9 5.1 43 7-57 203-252 (415)
135 1xip_A Nucleoporin NUP159; bet 62.3 3.4 0.00011 33.7 1.9 44 5-57 104-151 (388)
136 1xfd_A DIP, dipeptidyl aminope 61.6 7 0.00024 31.3 3.6 47 4-57 34-96 (723)
137 2ojh_A Uncharacterized protein 60.2 8.5 0.00029 25.8 3.3 49 3-57 147-200 (297)
138 2ecf_A Dipeptidyl peptidase IV 58.4 7.9 0.00027 31.2 3.4 46 7-57 129-177 (741)
139 3hfq_A Uncharacterized protein 56.2 5 0.00017 28.9 1.7 50 4-57 259-313 (347)
140 1xfd_A DIP, dipeptidyl aminope 52.7 6.2 0.00021 31.6 1.9 47 6-57 90-139 (723)
141 2z3z_A Dipeptidyl aminopeptida 51.0 5.3 0.00018 32.1 1.3 45 5-57 99-146 (706)
142 1jmx_B Amine dehydrogenase; ox 49.7 9.7 0.00033 26.7 2.3 48 3-57 17-70 (349)
143 3vgz_A Uncharacterized protein 49.2 15 0.00052 25.9 3.3 48 3-57 107-169 (353)
144 2w18_A PALB2, fancn, partner a 48.4 8.7 0.0003 31.6 2.2 47 5-57 155-208 (356)
145 1nir_A Nitrite reductase; hemo 48.0 13 0.00045 30.3 3.2 58 4-63 390-462 (543)
146 3hfq_A Uncharacterized protein 44.4 9.9 0.00034 27.4 1.7 48 5-57 61-113 (347)
147 3o4h_A Acylamino-acid-releasin 43.7 13 0.00044 29.3 2.4 43 7-57 175-223 (582)
148 4a5s_A Dipeptidyl peptidase 4 41.9 21 0.0007 29.6 3.5 43 7-57 92-137 (740)
149 2ecf_A Dipeptidyl peptidase IV 39.9 22 0.00076 28.6 3.3 23 33-57 109-134 (741)
150 3scy_A Hypothetical bacterial 39.0 22 0.00076 25.7 2.9 71 6-81 281-359 (361)
151 1k32_A Tricorn protease; prote 37.4 12 0.00041 32.5 1.4 48 3-57 396-457 (1045)
152 1nir_A Nitrite reductase; hemo 35.8 23 0.00078 28.9 2.8 47 3-57 155-205 (543)
153 1z68_A Fibroblast activation p 32.5 23 0.00079 28.6 2.3 44 6-57 89-135 (719)
154 1jof_A Carboxy-CIS,CIS-muconat 31.7 30 0.001 25.6 2.7 49 5-57 165-220 (365)
155 1xip_A Nucleoporin NUP159; bet 30.8 21 0.00072 28.9 1.8 44 3-57 142-187 (388)
156 3fvz_A Peptidyl-glycine alpha- 27.9 35 0.0012 24.9 2.5 36 4-42 215-250 (329)
157 1z68_A Fibroblast activation p 26.8 19 0.00063 29.1 0.8 46 5-57 34-95 (719)
158 3e5z_A Putative gluconolactona 21.9 1E+02 0.0035 21.6 3.9 46 3-57 46-95 (296)
No 1
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.85 E-value=8e-06 Score=62.68 Aligned_cols=61 Identities=11% Similarity=0.096 Sum_probs=42.3
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhhccCCCCCCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLWRNLHHHFRVPGKK 70 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIWnn~~~P~t~PG~k 70 (118)
.|.+||+|.|||... ..+.+...|+++|.+|.|+|.... +.||.| .+|+-+..|..-||.+
T Consensus 275 sgs~D~~i~vwd~~~------~~~~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v--~~w~v~~~~~~~p~p~ 340 (344)
T 4gqb_B 275 SLSEDCSLAVLDSSL------SELFRSQAHRDFVRDATWSPLNHSLLTTVGWDHQV--VHHVVPTEPLPAPGPA 340 (344)
T ss_dssp EEETTSCEEEECTTC------CEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCE--EEEECCC---------
T ss_pred EEeCCCeEEEEECCC------CcEEEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeE--EEEECCCCCCCCCCCC
Confidence 467899999999632 235667889999999999998876 679999 9996555655435544
No 2
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=97.80 E-value=3.4e-05 Score=56.81 Aligned_cols=79 Identities=23% Similarity=0.328 Sum_probs=56.2
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCC------CCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLH------HHFRVPG 68 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~------~P~t~PG 68 (118)
.|.+||.|.|||......+. ..+.....|+++|.+|.|+|...+ +.+|.| .|| .... .++. ++
T Consensus 84 ~~~~dg~v~vw~~~~~~~~~-~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v--~iwd~~~~~~~~~~~~~~~-~~ 159 (416)
T 2pm9_A 84 GALDNGSLELYSTNEANNAI-NSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEI--FIWDMNKCTESPSNYTPLT-PG 159 (416)
T ss_dssp EEESSSCEEEECCSSTTSCC-CEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCE--EBCBTTTTSSCTTTCCCBC-CC
T ss_pred EEccCCeEEEeecccccccc-cchhhccCCccceEEEEEcCCCCCEEEEEcCCCeE--EEEECCCCccccccccccc-cc
Confidence 46789999999987644332 234777889999999999998555 789999 999 4444 4555 32
Q ss_pred C-CCCcccceeeecCcc
Q psy14121 69 K-KTFNLILGRLGLGQS 84 (118)
Q Consensus 69 ~-ks~p~ei~~l~~~~~ 84 (118)
. ......+.+|.|...
T Consensus 160 ~~~~~~~~v~~~~~~~~ 176 (416)
T 2pm9_A 160 QSMSSVDEVISLAWNQS 176 (416)
T ss_dssp CSCCSSCCCCEEEECSS
T ss_pred cccCCCCCeeEEEeCCC
Confidence 2 233557788888654
No 3
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.60 E-value=3e-05 Score=59.78 Aligned_cols=51 Identities=22% Similarity=0.257 Sum_probs=40.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
-|.+||.|.|||.+. ++...+.+...|+++|.+|.|+|...+ +.||.| .||
T Consensus 137 sGs~dg~i~lWd~~~---~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v--~iw 192 (435)
T 4e54_B 137 VGSKGGDIMLWNFGI---KDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTT--RLQ 192 (435)
T ss_dssp EEETTSCEEEECSSC---CSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCE--EEE
T ss_pred EEeCCCEEEEEECCC---CCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEE--EEe
Confidence 478999999999742 222223667789999999999998877 789999 999
No 4
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=97.55 E-value=5.4e-05 Score=54.17 Aligned_cols=75 Identities=13% Similarity=0.093 Sum_probs=50.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh-ccCCCC-CCCCCCCCCcc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW-RNLHHH-FRVPGKKTFNL 74 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW-nn~~~P-~t~PG~ks~p~ 74 (118)
.|.+||.|.|||.+. + ..+.....|+++|.+|.|+|...+ +.+|.| .|| -...++ ..+........
T Consensus 90 ~~~~dg~i~v~d~~~---~--~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i--~iwd~~~~~~~~~~~~~~~~~~ 162 (366)
T 3k26_A 90 VAGSRGIIRIINPIT---M--QCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHAL--RLWNIQTDTLVAIFGGVEGHRD 162 (366)
T ss_dssp EEETTCEEEEECTTT---C--CEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCE--EEEETTTTEEEEEECSTTSCSS
T ss_pred EecCCCEEEEEEchh---c--eEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeE--EEEEeecCeEEEEecccccccC
Confidence 467899999999853 1 234667789999999999996555 679999 999 222222 22111123455
Q ss_pred cceeeecCc
Q psy14121 75 ILGRLGLGQ 83 (118)
Q Consensus 75 ei~~l~~~~ 83 (118)
.+.+|.|..
T Consensus 163 ~v~~~~~~~ 171 (366)
T 3k26_A 163 EVLSADYDL 171 (366)
T ss_dssp CEEEEEECT
T ss_pred ceeEEEECC
Confidence 677787754
No 5
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.54 E-value=3.9e-05 Score=58.31 Aligned_cols=48 Identities=10% Similarity=0.097 Sum_probs=38.8
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.+||+|.|||.+. ..+.+...|+++|.+|+|+|.... +.||.| .||
T Consensus 287 sgs~D~~i~iwd~~~------~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v--~iW 339 (357)
T 4g56_B 287 SISEDCTVAVLDADF------SEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWDHKV--LHH 339 (357)
T ss_dssp EEETTSCEEEECTTS------CEEEEECCCSSCEEEEEECSSSTTEEEEEETTSCE--EEE
T ss_pred EEeCCCEEEEEECCC------CcEeEECCCCCCEEEEEEeCCCCCEEEEEcCCCeE--EEE
Confidence 467899999999742 234455689999999999997665 789999 999
No 6
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=97.36 E-value=0.00028 Score=54.30 Aligned_cols=48 Identities=21% Similarity=0.308 Sum_probs=40.2
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.+||.|.|||.+ + ..+.....|+++|.+|.|+|..++ +.|+.| .||
T Consensus 226 ~g~~dg~i~~wd~~----~--~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v--~iw 278 (435)
T 4e54_B 226 TGDNVGNVILLNMD----G--KELWNLRMHKKKVTHVALNPCCDWFLATASVDQTV--KIW 278 (435)
T ss_dssp EECSSSBEEEEESS----S--CBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBC--CEE
T ss_pred EEeCCCcEeeeccC----c--ceeEEEecccceEEeeeecCCCceEEEEecCccee--eEE
Confidence 46789999999963 2 234677889999999999999887 578999 999
No 7
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.31 E-value=0.00021 Score=50.50 Aligned_cols=49 Identities=16% Similarity=0.217 Sum_probs=40.4
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
+|.+||.|.|||... + ..+...+-|+++|.+|.|+|...- +.||.| .||
T Consensus 259 sg~~d~~i~iwd~~~---~--~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v--~iW 311 (318)
T 4ggc_A 259 HGFAQNQLVIWKYPT---M--AKVAELKGHTSRVLSLTMSPDGATVASAAADETL--RLW 311 (318)
T ss_dssp ECTTTCCEEEEETTT---C--CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEE--EEE
T ss_pred EEcCCCEEEEEECCC---C--cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeE--EEE
Confidence 467899999999753 1 234777889999999999997766 789999 999
No 8
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=97.29 E-value=0.00033 Score=51.93 Aligned_cols=49 Identities=12% Similarity=0.164 Sum_probs=38.2
Q ss_pred CccccceEEEeehhhhcCCCCccc-ccccc-cccceeEEEeccCCCC---CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKK-HSGPVRALDFNKFQVV---ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~K-HtGpVraLdFNp~Q~N---gs~GEI~~fIW 57 (118)
.|.+||.|.|||...- ..+ ...+. |.++|.+|.|+|.... ++++.| .||
T Consensus 187 sg~~dg~i~iwd~~~~-----~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v--~iw 240 (343)
T 3lrv_A 187 LYSPDGILDVYNLSSP-----DQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTV--VCF 240 (343)
T ss_dssp EECTTSCEEEEESSCT-----TSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBE--EEE
T ss_pred EEcCCCEEEEEECCCC-----CCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeE--EEE
Confidence 4679999999998531 122 45555 9999999999997766 667799 999
No 9
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=97.28 E-value=0.00018 Score=57.34 Aligned_cols=77 Identities=12% Similarity=0.088 Sum_probs=52.1
Q ss_pred CccccceEEEeehhhhcCCCCc---c---cccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNK---V---DILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHHFRVPG 68 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~---~---l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P~t~PG 68 (118)
.|.+||.|.|||.+....+... . +...+.|+++|.+|.|+|...+ +.+|.| .|| +.....+.
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~v--~iwD~~~~~~~~~--- 187 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGSI--AVLQVTETVKVCA--- 187 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSCE--EEEEESSSEEEEE---
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCeE--EEEEcCCCcceee---
Confidence 4678999999999887544211 1 2445569999999999999766 789999 999 33222222
Q ss_pred CCCCcccceeeecCc
Q psy14121 69 KKTFNLILGRLGLGQ 83 (118)
Q Consensus 69 ~ks~p~ei~~l~~~~ 83 (118)
.......+.||.|..
T Consensus 188 ~~~~~~~v~~v~wsp 202 (434)
T 2oit_A 188 TLPSTVAVTSVCWSP 202 (434)
T ss_dssp EECGGGCEEEEEECT
T ss_pred ccCCCCceeEEEEcC
Confidence 111234677788763
No 10
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=97.22 E-value=0.00026 Score=54.21 Aligned_cols=49 Identities=18% Similarity=0.331 Sum_probs=40.3
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
-|.+||+|.|||.+. ...+....-|+++|.++.|+|...+ +.|+.| .||
T Consensus 144 sgs~d~~i~iwd~~~-----~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v--~iw 197 (344)
T 4gqb_B 144 SGSKDICIKVWDLAQ-----QVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRI--LLW 197 (344)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCE--EEE
T ss_pred EEeCCCeEEEEECCC-----CcEEEEEcCcCCceEEEEecCCCCCceeeecccccc--ccc
Confidence 367899999999853 1234777889999999999999877 678999 999
No 11
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=97.15 E-value=0.0002 Score=50.52 Aligned_cols=47 Identities=13% Similarity=0.275 Sum_probs=37.0
Q ss_pred cceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 6 DGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 6 nG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
|++|.|||++. |+...+.+...|.+.|.+|.|+|.... +.||.| .||
T Consensus 44 D~tV~iWd~~t---g~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs~Dg~v--~iw 94 (318)
T 4ggc_A 44 DNSVYLWSASS---GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV--QLW 94 (318)
T ss_dssp TTEEEEEETTT---CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred CCEEEEEECCC---CCEEEEEEecCCCCeEEEEEECCCCCEEEEEECCCcE--EEe
Confidence 78999999853 221122566789999999999998776 789999 999
No 12
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=97.13 E-value=0.00021 Score=54.64 Aligned_cols=72 Identities=11% Similarity=0.214 Sum_probs=47.5
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCC-CCCCCCCCCcccc
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHH-FRVPGKKTFNLIL 76 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P-~t~PG~ks~p~ei 76 (118)
|+ |++|.|||++. |+-..+.+...|.+.|.+|.|+|...- +.+|.| .|| -...++ .++.| ....+
T Consensus 122 gl-d~tV~lWd~~t---g~~~~~~~~~~~~~~V~sv~fspdg~~lasgs~Dg~v--~iWd~~~~~~~~~~~~---h~~~v 192 (420)
T 4gga_A 122 AL-DNSVYLWSASS---GDILQLLQMEQPGEYISSVAWIKEGNYLAVGTSSAEV--QLWDVQQQKRLRNMTS---HSARV 192 (420)
T ss_dssp EE-TTEEEEEETTT---CCEEEEEECCSTTCCEEEEEECTTSSEEEEEETTSCE--EEEETTTTEEEEEECC---CSSCE
T ss_pred Ee-CCEEEEEECCC---CCEEEEEEecCCCCcEEEEEECCCCCEEEEEECCCeE--EEEEcCCCcEEEEEeC---CCCce
Confidence 45 78999999852 221123566789999999999997665 789999 999 222222 22122 23456
Q ss_pred eeeecCc
Q psy14121 77 GRLGLGQ 83 (118)
Q Consensus 77 ~~l~~~~ 83 (118)
.|+.|+.
T Consensus 193 ~~~s~~~ 199 (420)
T 4gga_A 193 GSLSWNS 199 (420)
T ss_dssp EEEEEET
T ss_pred EEEeeCC
Confidence 6777754
No 13
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=97.10 E-value=0.0007 Score=51.34 Aligned_cols=49 Identities=18% Similarity=0.245 Sum_probs=40.2
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
-|..||.|.|||... ...+...+.|+++|.+|.|+|.... +.+|.| .||
T Consensus 156 sgs~dg~v~iwd~~~-----~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v--~~w 209 (357)
T 4g56_B 156 SGGKDFSVKVWDLSQ-----KAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRI--LLW 209 (357)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCE--EEC
T ss_pred EEeCCCeEEEEECCC-----CcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCce--EEE
Confidence 367899999999753 1234777889999999999998876 788999 999
No 14
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=97.08 E-value=0.00021 Score=50.92 Aligned_cols=71 Identities=10% Similarity=0.195 Sum_probs=49.3
Q ss_pred CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCCCCCCCCCCCccc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHHFRVPGKKTFNLI 75 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P~t~PG~ks~p~e 75 (118)
.|.+||.|.|||.+. ....+ .....|.++|.+|.|+|.... +.+|.| .|| -....+.. .......
T Consensus 59 ~~~~dg~i~iw~~~~----~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v--~iwd~~~~~~~~---~~~~~~~ 129 (368)
T 3mmy_A 59 AGSWANDVRCWEVQD----SGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTA--KMWDLSSNQAIQ---IAQHDAP 129 (368)
T ss_dssp EEETTSEEEEEEECT----TSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE--EEEETTTTEEEE---EEECSSC
T ss_pred EECCCCcEEEEEcCC----CCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcE--EEEEcCCCCcee---eccccCc
Confidence 467899999999853 11233 677789999999999996555 779999 999 22223322 1223456
Q ss_pred ceeeec
Q psy14121 76 LGRLGL 81 (118)
Q Consensus 76 i~~l~~ 81 (118)
+.++.|
T Consensus 130 v~~~~~ 135 (368)
T 3mmy_A 130 VKTIHW 135 (368)
T ss_dssp EEEEEE
T ss_pred eEEEEE
Confidence 777777
No 15
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=97.06 E-value=0.00035 Score=52.28 Aligned_cols=54 Identities=19% Similarity=0.337 Sum_probs=39.3
Q ss_pred CccccceEEEeehhhhcCCCCcc--c--ccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKV--D--ILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~--l--~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.+||.|.|||.+.--...... + .....|++.|.+|.|+|..+. +.||.| .||
T Consensus 269 s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~laS~s~Dg~v--~~W 331 (345)
T 3fm0_A 269 TACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKEPGLLASCSDDGEV--AFW 331 (345)
T ss_dssp EEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSSTTEEEEEETTSCE--EEE
T ss_pred EEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCCceEEEEcCCCCcE--EEE
Confidence 36789999999975422111111 1 234679999999999998875 789999 999
No 16
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=97.05 E-value=0.00025 Score=52.44 Aligned_cols=51 Identities=18% Similarity=0.245 Sum_probs=38.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.+||.|.|||... +......+...|+++|.+|.|+|...+ +.+|.| .||
T Consensus 91 s~~~dg~i~iwd~~~---~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i--~iw 146 (383)
T 3ei3_B 91 VGSKGGDIILWDYDV---QNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSSIRGAT--TLR 146 (383)
T ss_dssp EEEBTSCEEEEETTS---TTCEEEECCCSTTCBEEEEEEETTEEEEEEEEETTTEE--EEE
T ss_pred EEcCCCeEEEEeCCC---cccceeeecCCcCCceeEEEeCCCCCCEEEEEeCCCEE--EEE
Confidence 467899999999863 111112444579999999999996555 788999 999
No 17
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=97.04 E-value=0.00056 Score=50.81 Aligned_cols=49 Identities=16% Similarity=0.282 Sum_probs=39.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||+|.|||... + ..+.....|+++|.+|.|+|.... +.++.| .||
T Consensus 93 s~s~D~~v~lwd~~~---~--~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i--~~w 145 (343)
T 2xzm_R 93 SSSWDKTLRLWDLRT---G--TTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREI--KLW 145 (343)
T ss_dssp EEETTSEEEEEETTS---S--CEEEEEECCCSCEEEEEECSSTTEEEEEETTSCE--EEE
T ss_pred EEcCCCcEEEEECCC---C--cEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEE--EEE
Confidence 366899999999743 1 223667789999999999997766 789999 999
No 18
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=97.02 E-value=0.00042 Score=51.39 Aligned_cols=71 Identities=10% Similarity=0.212 Sum_probs=48.3
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCccc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLI 75 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~e 75 (118)
.|..||.|.|||.+. + ........|.++|.+|.|+|.... +.+|.| .|| .......++. .....
T Consensus 114 ~~~~dg~i~iwd~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i--~iwd~~~~~~~~~~~---~h~~~ 183 (420)
T 3vl1_A 114 LGTTEGDIKVLDSNF---N--LQREIDQAHVSEITKLKFFPSGEALISSSQDMQL--KIWSVKDGSNPRTLI---GHRAT 183 (420)
T ss_dssp EEETTSCEEEECTTS---C--EEEEETTSSSSCEEEEEECTTSSEEEEEETTSEE--EEEETTTCCCCEEEE---CCSSC
T ss_pred EEECCCCEEEEeCCC---c--ceeeecccccCccEEEEECCCCCEEEEEeCCCeE--EEEeCCCCcCceEEc---CCCCc
Confidence 367899999999742 1 123556789999999999997655 778999 999 3333333321 23345
Q ss_pred ceeeecC
Q psy14121 76 LGRLGLG 82 (118)
Q Consensus 76 i~~l~~~ 82 (118)
+.+|.|.
T Consensus 184 v~~~~~~ 190 (420)
T 3vl1_A 184 VTDIAII 190 (420)
T ss_dssp EEEEEEE
T ss_pred EEEEEEc
Confidence 6677774
No 19
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=97.01 E-value=0.00036 Score=52.47 Aligned_cols=79 Identities=10% Similarity=0.119 Sum_probs=51.4
Q ss_pred CccccceEEEeehhhhcCCC--CcccccccccccceeEEEeccCCCC-----CCcceehhhhh-ccCCCC-CCCCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGD--NKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW-RNLHHH-FRVPGKKTF 72 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~--~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW-nn~~~P-~t~PG~ks~ 72 (118)
.|.+||.|.|||...--... ...+.....|.++|.+|.|+|...+ +.+|.| .|| -...++ .++ .....
T Consensus 99 s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i--~iwd~~~~~~~~~~-~~~~~ 175 (402)
T 2aq5_A 99 SGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVI--LVWDVGTGAAVLTL-GPDVH 175 (402)
T ss_dssp EEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCE--EEEETTTTEEEEEE-CTTTC
T ss_pred EEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEE--EEEECCCCCccEEE-ecCCC
Confidence 46789999999975421000 1234677789999999999999866 789999 999 222222 221 00223
Q ss_pred cccceeeecCc
Q psy14121 73 NLILGRLGLGQ 83 (118)
Q Consensus 73 p~ei~~l~~~~ 83 (118)
...+.+|.|..
T Consensus 176 ~~~v~~~~~~~ 186 (402)
T 2aq5_A 176 PDTIYSVDWSR 186 (402)
T ss_dssp CSCEEEEEECT
T ss_pred CCceEEEEECC
Confidence 45677888753
No 20
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=97.00 E-value=0.00037 Score=51.87 Aligned_cols=49 Identities=14% Similarity=0.206 Sum_probs=39.8
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.|||..+ + ..+.....|+++|.+|.|+|.... +.||.| .||
T Consensus 287 ~g~~d~~i~vwd~~~---~--~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~i--~iW 339 (340)
T 1got_B 287 AGYDDFNCNVWDALK---A--DRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFL--KIW 339 (340)
T ss_dssp EEETTSEEEEEETTT---C--CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE--EEE
T ss_pred EECCCCeEEEEEccc---C--cEeeEeecCCCcEEEEEEcCCCCEEEEEcCCccE--Eec
Confidence 477899999999743 1 233667789999999999997766 789999 999
No 21
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=96.99 E-value=0.00041 Score=53.01 Aligned_cols=49 Identities=16% Similarity=0.257 Sum_probs=40.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
+|.+||.|.|||.... ..+...+-|+++|.+|.|+|...- +.|+-| .||
T Consensus 339 sg~~d~~I~iwd~~~~-----~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tv--riW 391 (420)
T 4gga_A 339 HGFAQNQLVIWKYPTM-----AKVAELKGHTSRVLSLTMSPDGATVASAAADETL--RLW 391 (420)
T ss_dssp ECTTTCCEEEEETTTC-----CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEE--EEE
T ss_pred EecCCCEEEEEECCCC-----cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeE--EEE
Confidence 4678999999997532 234777889999999999998776 789999 999
No 22
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.99 E-value=0.0004 Score=52.32 Aligned_cols=54 Identities=20% Similarity=0.320 Sum_probs=40.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
-|.+||+|.|||......+........-.|+++|.+|.|+|.... +.+|.| .||
T Consensus 81 s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg~i--~vw 138 (437)
T 3gre_A 81 TGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDGQI--IVL 138 (437)
T ss_dssp EEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred EecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCCEE--EEE
Confidence 367899999999988665542212222259999999999995554 788999 999
No 23
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.96 E-value=0.00063 Score=52.42 Aligned_cols=75 Identities=19% Similarity=0.314 Sum_probs=52.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCCCCCC-CCCCCCCc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLHHHFR-VPGKKTFN 73 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~~P~t-~PG~ks~p 73 (118)
.|.+||.|.+||...-- ....+.....|.++|++|.|+|..++ +.+|.| .|| .+...|.. +.+ ..
T Consensus 249 s~~~dg~i~i~d~~~~~--~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v--~vwd~~~~~~~~~~~~~---h~ 321 (430)
T 2xyi_A 249 SVADDQKLMIWDTRNNN--TSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTV--ALWDLRNLKLKLHSFES---HK 321 (430)
T ss_dssp EEETTSEEEEEETTCSC--SSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEE--EEEETTCTTSCSEEEEC---CS
T ss_pred EEeCCCeEEEEECCCCC--CCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeE--EEEeCCCCCCCeEEeec---CC
Confidence 36789999999986421 01233566789999999999999887 788999 999 55555532 111 24
Q ss_pred ccceeeecCc
Q psy14121 74 LILGRLGLGQ 83 (118)
Q Consensus 74 ~ei~~l~~~~ 83 (118)
..+.+|.|..
T Consensus 322 ~~v~~i~~sp 331 (430)
T 2xyi_A 322 DEIFQVQWSP 331 (430)
T ss_dssp SCEEEEEECS
T ss_pred CCEEEEEECC
Confidence 4677888854
No 24
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.96 E-value=0.00031 Score=50.03 Aligned_cols=53 Identities=15% Similarity=0.125 Sum_probs=39.0
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
|.+||+|.|||...--..........+-|+++|.+|.|+|...- +.++.| .+|
T Consensus 57 ~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~~d~~i--~~~ 113 (340)
T 4aow_A 57 ASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGSWDGTL--RLW 113 (340)
T ss_dssp EETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred EcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEcccccc--eEE
Confidence 56899999999754211111112566789999999999997665 789999 899
No 25
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.94 E-value=0.00012 Score=56.23 Aligned_cols=54 Identities=15% Similarity=0.194 Sum_probs=38.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCC-------C-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQV-------V-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~-------N-----gs~GEI~~fIW 57 (118)
.|.+|++|.|||.+.--......+...+-|++.|.+|+|+|... + +.|+.| -||
T Consensus 106 s~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv--~~W 171 (393)
T 4gq1_A 106 CVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTL--IIW 171 (393)
T ss_dssp EEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEE--EEE
T ss_pred EEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeE--EEE
Confidence 47789999999975310000011256788999999999998532 2 789999 999
No 26
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=96.94 E-value=0.00063 Score=50.55 Aligned_cols=70 Identities=17% Similarity=0.209 Sum_probs=47.3
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCcccc
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLIL 76 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei 76 (118)
|..||.|.|||.. + ........|.++|.+|.|+|.... +.+|.| .|| .+...+.... .....+
T Consensus 190 ~~~d~~i~iwd~~----~--~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v--~iwd~~~~~~~~~~~---~~~~~v 258 (343)
T 2xzm_R 190 VGWDGRLKVWNTN----F--QIRYTFKAHESNVNHLSISPNGKYIATGGKDKKL--LIWDILNLTYPQREF---DAGSTI 258 (343)
T ss_dssp EETTSEEEEEETT----T--EEEEEEECCSSCEEEEEECTTSSEEEEEETTCEE--EEEESSCCSSCSEEE---ECSSCE
T ss_pred EcCCCEEEEEcCC----C--ceeEEEcCccccceEEEECCCCCEEEEEcCCCeE--EEEECCCCcccceee---cCCCcE
Confidence 5679999999942 1 223667789999999999997766 789999 999 3444332201 012236
Q ss_pred eeeecCc
Q psy14121 77 GRLGLGQ 83 (118)
Q Consensus 77 ~~l~~~~ 83 (118)
.+|.|..
T Consensus 259 ~~v~~sp 265 (343)
T 2xzm_R 259 NQIAFNP 265 (343)
T ss_dssp EEEEECS
T ss_pred EEEEECC
Confidence 6666654
No 27
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=96.93 E-value=0.00044 Score=50.68 Aligned_cols=54 Identities=9% Similarity=0.156 Sum_probs=41.0
Q ss_pred CccccceEEEeehhhhcCCCCc-ccccccccccceeEEEeccC----C---CC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNK-VDILSKKHSGPVRALDFNKF----Q---VV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~-~l~~~~KHtGpVraLdFNp~----Q---~N----gs~GEI~~fIW 57 (118)
.|..||.|.|||.+..-..... .+.....|.++|.+|.|+|. . .. +.+|.| .||
T Consensus 31 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i--~iw 96 (397)
T 1sq9_A 31 SCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDL--LFY 96 (397)
T ss_dssp EEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCE--EEE
T ss_pred EEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEcCCCCE--EEE
Confidence 4678999999998653221111 23777799999999999998 5 44 679999 999
No 28
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=96.92 E-value=0.00056 Score=50.58 Aligned_cols=71 Identities=18% Similarity=0.265 Sum_probs=49.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh--ccCC---CCCCCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW--RNLH---HHFRVPGKKT 71 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW--nn~~---~P~t~PG~ks 71 (118)
.|.+||.|.+||.. + ..+.....|.++|.+|.|+|..++ +.++.| .|| .... .+.. ...
T Consensus 180 ~~~~d~~i~i~d~~----~--~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i--~iwd~~~~~~~~~~~~---~~~ 248 (383)
T 3ei3_B 180 TGDSTGRLLLLGLD----G--HEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATV--KLWDLRNIKDKNSYIA---EMP 248 (383)
T ss_dssp EEETTSEEEEEETT----S--CEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEE--EEEEGGGCCSTTCEEE---EEE
T ss_pred EECCCCCEEEEECC----C--CEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEE--EEEeCCCCCcccceEE---Eec
Confidence 36789999999972 2 234677789999999999999985 779999 999 4322 2221 111
Q ss_pred CcccceeeecCc
Q psy14121 72 FNLILGRLGLGQ 83 (118)
Q Consensus 72 ~p~ei~~l~~~~ 83 (118)
....+.+|.|..
T Consensus 249 ~~~~v~~~~~s~ 260 (383)
T 3ei3_B 249 HEKPVNAAYFNP 260 (383)
T ss_dssp CSSCEEEEEECT
T ss_pred CCCceEEEEEcC
Confidence 344566777654
No 29
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=96.90 E-value=0.00033 Score=53.67 Aligned_cols=49 Identities=14% Similarity=0.168 Sum_probs=40.2
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
-|.+|++|.|||... ...+.....|.++|.++.|+|..++ +.+|.| .||
T Consensus 161 s~s~D~tv~~Wd~~~-----~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v--~~w 214 (393)
T 4gq1_A 161 SVGDDCTLIIWRLTD-----EGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNI--RIF 214 (393)
T ss_dssp EEETTSEEEEEEEET-----TEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEE--EEE
T ss_pred EEECCCeEEEEECCC-----CceeeeecCCCCCcEEEEECCCCCceEEecCCCCEE--EEE
Confidence 356899999999743 1234677889999999999998876 789999 999
No 30
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=96.89 E-value=0.00062 Score=48.52 Aligned_cols=49 Identities=20% Similarity=0.396 Sum_probs=39.3
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.|||... + ..+.....|+++|.+|+|+|.... +.+|.| .||
T Consensus 49 ~~~~dg~i~vwd~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i--~iw 101 (369)
T 3zwl_B 49 SCSKDSSASVWYSLN---G--ERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSI--KLW 101 (369)
T ss_dssp EEESSSCEEEEETTT---C--CEEEEECCCSSCEEEEEECTTSSEEEEEETTTEE--EEE
T ss_pred EEeCCCEEEEEeCCC---c--hhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeE--EEE
Confidence 366899999999743 1 234677889999999999996555 789999 999
No 31
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=96.89 E-value=0.00069 Score=50.92 Aligned_cols=53 Identities=13% Similarity=0.214 Sum_probs=39.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|..+|.|.|||.++--.- ...+.....|+++|.+|+|+|+..+ +.+|.| .||
T Consensus 52 ~~~~~g~i~v~~~~~~~~~-~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v--~vw 109 (402)
T 2aq5_A 52 EASGGGAFLVLPLGKTGRV-DKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTV--MVW 109 (402)
T ss_dssp CCSSSCCEEEEETTCCEEC-CTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEE--EEE
T ss_pred EEcCCCEEEEEECccCCCC-CCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeE--EEE
Confidence 4678999999998542110 0123566789999999999997666 679999 999
No 32
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=96.86 E-value=0.00054 Score=50.80 Aligned_cols=49 Identities=16% Similarity=0.244 Sum_probs=39.4
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.+||.+. + ..+.....|+++|.+|.|+|.... +.+|.| .||
T Consensus 156 s~s~d~~i~iwd~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v--~iw 208 (420)
T 3vl1_A 156 SSSQDMQLKIWSVKD---G--SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTI--RLW 208 (420)
T ss_dssp EEETTSEEEEEETTT---C--CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCE--EEE
T ss_pred EEeCCCeEEEEeCCC---C--cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcE--EEe
Confidence 367899999999853 1 223666789999999999997665 778999 999
No 33
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=96.86 E-value=0.0006 Score=52.03 Aligned_cols=50 Identities=12% Similarity=0.238 Sum_probs=39.5
Q ss_pred CccccceEEEeehhhhcCCCCccccc-ccccccceeEEEeccCCCC----CCcceehhhhhc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDIL-SKKHSGPVRALDFNKFQVV----ATNFKIRAHLWR 58 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~-~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWn 58 (118)
-|.+||+|.|||.+.. ..+.. .+-|+++|.+|.|+|...- ..|+-| -||+
T Consensus 286 sgs~D~~V~iwd~~~~-----~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tv--rvw~ 340 (365)
T 4h5i_A 286 LASNDNSIALVKLKDL-----SMSKIFKQAHSFAITEVTISPDSTYVASVSAANTI--HIIK 340 (365)
T ss_dssp EEETTSCEEEEETTTT-----EEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEE--EEEE
T ss_pred EEcCCCEEEEEECCCC-----cEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeE--EEEE
Confidence 4778999999998532 12344 4669999999999997766 789999 9993
No 34
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=96.85 E-value=0.00065 Score=50.57 Aligned_cols=49 Identities=16% Similarity=0.247 Sum_probs=39.4
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||+|.|||... + ..+.....|.++|.+|.|+|.... +.+|.| .||
T Consensus 201 sg~~d~~v~~wd~~~---~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v--~iw 253 (340)
T 1got_B 201 SGACDASAKLWDVRE---G--MCRQTFTGHESDINAICFFPNGNAFATGSDDATC--RLF 253 (340)
T ss_dssp EEETTSCEEEEETTT---C--SEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEE
T ss_pred EEeCCCcEEEEECCC---C--eeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcE--EEE
Confidence 367899999999843 1 223667789999999999997665 789999 999
No 35
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.83 E-value=0.0006 Score=50.98 Aligned_cols=51 Identities=14% Similarity=0.237 Sum_probs=40.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhcc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWRN 59 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWnn 59 (118)
.|.+||+|.|||... ...+.....|+++|.+|.|+|.... +.||.| .||+-
T Consensus 265 s~s~D~~v~iwd~~~-----~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d~~i--~vwd~ 319 (321)
T 3ow8_A 265 SSSSDKSVKVWDVGT-----RTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDDQEI--HIYDC 319 (321)
T ss_dssp EEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCCE--EEEEC
T ss_pred EEeCCCcEEEEeCCC-----CEEEEEEcCCCCcEEEEEECCCCCEEEEEeCCCeE--EEEeC
Confidence 367899999999843 1234677889999999999997665 889999 99953
No 36
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.83 E-value=0.00055 Score=50.01 Aligned_cols=51 Identities=22% Similarity=0.360 Sum_probs=38.4
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccC-CCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKF-QVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~-Q~N-----gs~GEI~~fIW 57 (118)
-|..||+|.|||.+. +....+.....|+++|.+|+|+|- ..+ +.|+.| .||
T Consensus 26 s~s~D~~v~iw~~~~---~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v--~iW 82 (297)
T 2pm7_B 26 TCSSDKTIKIFEVEG---ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV--MIW 82 (297)
T ss_dssp EEETTSCEEEEEBCS---SCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEE--EEE
T ss_pred EEeCCCEEEEEecCC---CCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEE--EEE
Confidence 367899999999742 111233677889999999999864 233 789999 999
No 37
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=96.83 E-value=0.00061 Score=49.93 Aligned_cols=74 Identities=11% Similarity=0.074 Sum_probs=48.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCC--CC-CCCCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLH--HH-FRVPGKKTF 72 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~--~P-~t~PG~ks~ 72 (118)
-|..||.|.|||.+. +....+.....|+++|.+|+|+|...- +.+|.| .|| .... .+ ..+.+ .
T Consensus 28 ~~~~d~~i~iw~~~~---~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v--~vwd~~~~~~~~~~~~~~~---~ 99 (377)
T 3dwl_C 28 TTTATNQVELYEQDG---NGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNA--YVYEKRPDGTWKQTLVLLR---L 99 (377)
T ss_dssp CCCSSSCBCEEEEET---TEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSE--EEC------CCCCEEECCC---C
T ss_pred EecCCCEEEEEEccC---CceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeE--EEEEcCCCCceeeeeEecc---c
Confidence 466899999999862 100233677789999999999998665 678999 999 2222 12 22111 3
Q ss_pred cccceeeecCc
Q psy14121 73 NLILGRLGLGQ 83 (118)
Q Consensus 73 p~ei~~l~~~~ 83 (118)
...+.+|.|..
T Consensus 100 ~~~v~~~~~~~ 110 (377)
T 3dwl_C 100 NRAATFVRWSP 110 (377)
T ss_dssp SSCEEEEECCT
T ss_pred CCceEEEEECC
Confidence 44577777753
No 38
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.80 E-value=0.00042 Score=48.29 Aligned_cols=30 Identities=23% Similarity=0.470 Sum_probs=26.2
Q ss_pred ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 26 ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 26 ~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.....|.++|.+|+|+|...- +.||.| .||
T Consensus 300 ~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v--~iw 333 (351)
T 3f3f_A 300 SEHDDHNGEVWSVSWNLTGTILSSAGDDGKV--RLW 333 (351)
T ss_dssp EEECTTSSCEEEEEECSSSCCEEEEETTSCE--EEE
T ss_pred EEEecccccEEEEEEcCCCCEEEEecCCCcE--EEE
Confidence 556779999999999997765 789999 999
No 39
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.79 E-value=0.0006 Score=52.93 Aligned_cols=48 Identities=21% Similarity=0.401 Sum_probs=38.9
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhc
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWR 58 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWn 58 (118)
|.+||+|.|||+ .+ ..+...+-|+++|.+|.|+|...- +.++.| .||+
T Consensus 34 ~~~d~~v~iWd~----~~--~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~i--~vWd 85 (577)
T 2ymu_A 34 ASDDKTVKLWNR----NG--QLLQTLTGHSSSVWGVAFSPDGQTIASASDDKTV--KLWN 85 (577)
T ss_dssp EETTSEEEEECT----TS--CEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE--EEEE
T ss_pred EeCCCEEEEEEC----CC--CEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCEE--EEEE
Confidence 568999999995 23 234677889999999999997665 788999 9993
No 40
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.77 E-value=0.0011 Score=46.36 Aligned_cols=71 Identities=8% Similarity=0.102 Sum_probs=48.5
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCC--CCC-CCCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLH--HHF-RVPGKKTF 72 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~--~P~-t~PG~ks~ 72 (118)
.|.+||.|.|||.+. .........|.++|.+|.|+|.... +.+|.| .+| .+.. .+. .+ ...
T Consensus 34 s~~~dg~v~vw~~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i--~~~~~~~~~~~~~~~~~---~~~ 103 (313)
T 3odt_A 34 SVSRDGTVRLWSKDD-----QWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI--NGVPLFATSGEDPLYTL---IGH 103 (313)
T ss_dssp EEETTSEEEEEEESS-----SEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCE--EEEETTCCTTSCC-CEE---CCC
T ss_pred EEEcCCcEEEEECCC-----CEEEEEeecCCccEEEEEECCCCCEEEEecCCCeE--EEEEeeecCCCCcccch---hhc
Confidence 467899999999732 1223777889999999999996665 789999 988 3332 222 21 223
Q ss_pred cccceeeecC
Q psy14121 73 NLILGRLGLG 82 (118)
Q Consensus 73 p~ei~~l~~~ 82 (118)
...+.+|.|.
T Consensus 104 ~~~i~~~~~~ 113 (313)
T 3odt_A 104 QGNVCSLSFQ 113 (313)
T ss_dssp SSCEEEEEEE
T ss_pred ccCEEEEEec
Confidence 4556777774
No 41
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.76 E-value=0.00072 Score=49.55 Aligned_cols=49 Identities=20% Similarity=0.425 Sum_probs=40.3
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||+|.|||.+. + ..+.....|++.|.+|.|+|..+. +.||.| .||
T Consensus 72 s~s~d~~i~vwd~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v--~lW 124 (304)
T 2ynn_A 72 VGSDDFRIRVFNYNT---G--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTV--KLW 124 (304)
T ss_dssp EEETTSEEEEEETTT---C--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE--EEE
T ss_pred EECCCCEEEEEECCC---C--cEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeE--EEE
Confidence 367899999999743 1 234677889999999999998776 789999 999
No 42
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.76 E-value=0.00097 Score=48.07 Aligned_cols=49 Identities=22% Similarity=0.376 Sum_probs=39.8
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.|||... ...+...+.|.+.|.++.|+|.... +.+|.| .||
T Consensus 82 s~~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i--~iw 134 (312)
T 4ery_A 82 SASDDKTLKIWDVSS-----GKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESV--RIW 134 (312)
T ss_dssp EEETTSEEEEEETTT-----CCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE--EEE
T ss_pred EECCCCEEEEEECCC-----CcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcE--EEE
Confidence 367899999999743 1234677889999999999997665 789999 999
No 43
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=96.72 E-value=0.00071 Score=47.16 Aligned_cols=52 Identities=17% Similarity=0.323 Sum_probs=38.9
Q ss_pred CccccceEEEeehhhhcCCCC-cccccccccccceeEEEeccCC-CC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDN-KVDILSKKHSGPVRALDFNKFQ-VV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~-~~l~~~~KHtGpVraLdFNp~Q-~N-----gs~GEI~~fIW 57 (118)
.|.+||.|.|||.+.-- .. ..+.....|+++|.+|.|+|.+ .+ +.+|.| .||
T Consensus 28 ~~~~dg~i~iw~~~~~~--~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v--~vw 86 (351)
T 3f3f_A 28 TCSSDQHIKVFKLDKDT--SNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTV--KLW 86 (351)
T ss_dssp EEETTSEEEEEEECSSS--CCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCE--EEE
T ss_pred EeeCCCeEEEEECCCCC--CcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeE--EEE
Confidence 46789999999985310 11 1226667899999999999963 33 779999 999
No 44
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.70 E-value=0.0014 Score=50.45 Aligned_cols=73 Identities=19% Similarity=0.302 Sum_probs=50.2
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCccc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLI 75 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~e 75 (118)
.|..||+|.|||... + ..+.....|.+.|++|.|+|.... +.||.| .|| .+.....++.| ....
T Consensus 313 sgs~D~~i~iwd~~~---~--~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i--~vwd~~~~~~~~~~~~---h~~~ 382 (410)
T 1vyh_C 313 SGSRDKTIKMWDVST---G--MCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTL--RVWDYKNKRCMKTLNA---HEHF 382 (410)
T ss_dssp EEETTSEEEEEETTT---T--EEEEEEECCSSCEEEEEECSSSSCEEEEETTTEE--EEECCTTSCCCEEEEC---CSSC
T ss_pred EEeCCCeEEEEECCC---C--ceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeE--EEEECCCCceEEEEcC---CCCc
Confidence 367899999999743 1 123666789999999999997776 789999 999 32222223212 2345
Q ss_pred ceeeecCcc
Q psy14121 76 LGRLGLGQS 84 (118)
Q Consensus 76 i~~l~~~~~ 84 (118)
|.+|.|...
T Consensus 383 v~~l~~~~~ 391 (410)
T 1vyh_C 383 VTSLDFHKT 391 (410)
T ss_dssp EEEEEECSS
T ss_pred EEEEEEcCC
Confidence 778887643
No 45
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=96.69 E-value=0.00088 Score=51.98 Aligned_cols=48 Identities=21% Similarity=0.412 Sum_probs=39.3
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.|||. .+ +.+....-|+++|.+|.|.|.... +.|+.| +||
T Consensus 525 s~~~dg~v~lwd~----~~--~~~~~~~~h~~~v~~~~fs~dg~~l~s~~~D~~i--~~W 576 (577)
T 2ymu_A 525 SASDDKTVKLWNR----NG--QLLQTLTGHSSSVWGVAFSPDGQTIASASSDKTV--KLW 576 (577)
T ss_dssp EEETTSEEEEECT----TS--CEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE--EEE
T ss_pred EEECcCEEEEEeC----CC--CEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEE--EEe
Confidence 3678999999994 23 234677889999999999997766 789999 999
No 46
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=96.69 E-value=0.00063 Score=48.45 Aligned_cols=52 Identities=19% Similarity=0.195 Sum_probs=28.4
Q ss_pred CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.|.|+..+|-...+ .+.-.+ ..++-|+|+|.+|+|+|..++ +.|+.| .||
T Consensus 9 ~g~d~g~~~~~~~~~~--~~~~~l~~tL~GH~~~V~~v~~sp~~~~~l~S~s~D~~i--~vW 66 (340)
T 4aow_A 9 SGVDLGTENLYFQSMM--TEQMTLRGTLKGHNGWVTQIATTPQFPDMILSASRDKTI--IMW 66 (340)
T ss_dssp -------------------CEEEEEEEECCCSSCEEEEEECTTCTTEEEEEETTSCE--EEE
T ss_pred cccCCCCccEEEEEcc--CCceEEEEEECCccCCEEEEEEeCCCCCEEEEEcCCCeE--EEE
Confidence 5788898888755332 111133 667889999999999998877 678999 999
No 47
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=96.67 E-value=0.00089 Score=49.05 Aligned_cols=49 Identities=14% Similarity=0.253 Sum_probs=40.5
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||+|.|||... ...+...+-|.++|.++.|+|..+- +.||.| .||
T Consensus 203 s~s~D~~i~iWd~~~-----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i--~iW 255 (304)
T 2ynn_A 203 TASDDLTIKIWDYQT-----KSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGTL--KIW 255 (304)
T ss_dssp EEETTSEEEEEETTT-----TEEEEEEECCSSCEEEEEECSSSSEEEEEETTSCE--EEE
T ss_pred EEcCCCeEEEEeCCC-----CccceeeCCCCCCEEEEEECCCCCEEEEEcCCCeE--EEE
Confidence 467899999999743 1234777889999999999998776 789999 999
No 48
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.66 E-value=0.00092 Score=49.39 Aligned_cols=50 Identities=14% Similarity=0.149 Sum_probs=38.2
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC------CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV------ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N------gs~GEI~~fIW 57 (118)
|..||+|.|||... +.-..+.....|+++|.+|.|+|.... +.|+.| .||
T Consensus 77 ~s~D~~v~iWd~~~---~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i--~lw 132 (316)
T 3bg1_A 77 CSYDRKVIIWREEN---GTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAI--SLL 132 (316)
T ss_dssp EETTSCEEEECCSS---SCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCE--EEE
T ss_pred EECCCEEEEEECCC---CcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCE--EEE
Confidence 56799999999752 211223556789999999999998532 789999 999
No 49
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.65 E-value=0.00092 Score=50.56 Aligned_cols=71 Identities=15% Similarity=0.310 Sum_probs=48.8
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----C---Ccceehhhhh-ccCCCCCCCCCCCCCcc
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----A---TNFKIRAHLW-RNLHHHFRVPGKKTFNL 74 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----g---s~GEI~~fIW-nn~~~P~t~PG~ks~p~ 74 (118)
|..||.|.+||... ...+.....|.++|.+|.|+|.+.+ + .++.| .|| -...++.. .-....
T Consensus 235 ~~~d~~v~iwd~~~-----~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i--~i~d~~~~~~~~---~~~~~~ 304 (401)
T 4aez_A 235 GGNDNVVQIWDARS-----SIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQI--HFWNAATGARVN---TVDAGS 304 (401)
T ss_dssp EETTSCEEEEETTC-----SSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEE--EEEETTTCCEEE---EEECSS
T ss_pred EeCCCeEEEccCCC-----CCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEE--EEEECCCCCEEE---EEeCCC
Confidence 66899999999854 1233666789999999999999888 3 49999 999 23333322 011233
Q ss_pred cceeeecCc
Q psy14121 75 ILGRLGLGQ 83 (118)
Q Consensus 75 ei~~l~~~~ 83 (118)
.+.+|.|..
T Consensus 305 ~v~~~~~s~ 313 (401)
T 4aez_A 305 QVTSLIWSP 313 (401)
T ss_dssp CEEEEEECS
T ss_pred cEEEEEECC
Confidence 467777754
No 50
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.64 E-value=0.00091 Score=49.50 Aligned_cols=49 Identities=14% Similarity=0.339 Sum_probs=39.5
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.+||.... ........|+++|.+|.|+|...- +.||.| .||
T Consensus 171 s~~~d~~i~~wd~~~~-----~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i--~iw 223 (319)
T 3frx_A 171 SAGNDKMVKAWNLNQF-----QIEADFIGHNSNINTLTASPDGTLIASAGKDGEI--MLW 223 (319)
T ss_dssp EEETTSCEEEEETTTT-----EEEEEECCCCSCEEEEEECTTSSEEEEEETTCEE--EEE
T ss_pred EEeCCCEEEEEECCcc-----hhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeE--EEE
Confidence 3568999999998532 122667789999999999997766 789999 999
No 51
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.63 E-value=0.0011 Score=50.10 Aligned_cols=49 Identities=18% Similarity=0.310 Sum_probs=39.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.|||..+ + ..+.....|+++|.+|.|+|.... +.||.| .||
T Consensus 301 ~g~~d~~i~vwd~~~---~--~~~~~l~~h~~~v~~l~~spdg~~l~sgs~D~~v--~vW 353 (354)
T 2pbi_B 301 AGYNDYTINVWDVLK---G--SRVSILFGHENRVSTLRVSPDGTAFCSGSWDHTL--RVW 353 (354)
T ss_dssp EEETTSCEEEEETTT---C--SEEEEECCCSSCEEEEEECTTSSCEEEEETTSEE--EEE
T ss_pred EEECCCcEEEEECCC---C--ceEEEEECCCCcEEEEEECCCCCEEEEEcCCCCE--Eec
Confidence 467899999999742 2 234667789999999999998777 779999 998
No 52
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.63 E-value=0.00076 Score=48.41 Aligned_cols=74 Identities=11% Similarity=0.186 Sum_probs=48.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCC--CC----CCcceehhhhh--ccC--CCCCCCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ--VV----ATNFKIRAHLW--RNL--HHHFRVPGKKT 71 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q--~N----gs~GEI~~fIW--nn~--~~P~t~PG~ks 71 (118)
.|.+||.|.|||... +....+.....|.++|.+|.|+|.. .. +.+|.| .|| ... ..++.+ ..
T Consensus 74 s~~~dg~v~iwd~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i--~v~d~~~~~~~~~~~~---~~ 145 (379)
T 3jrp_A 74 SCSYDGKVLIWKEEN---GRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKV--SVVEFKENGTTSPIII---DA 145 (379)
T ss_dssp EEETTSCEEEEEEET---TEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEE--EEEECCTTSCCCEEEE---EC
T ss_pred EeccCCEEEEEEcCC---CceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcE--EEEecCCCCceeeEEe---cC
Confidence 467899999999754 1111336677799999999999984 33 789999 999 322 122221 12
Q ss_pred CcccceeeecCc
Q psy14121 72 FNLILGRLGLGQ 83 (118)
Q Consensus 72 ~p~ei~~l~~~~ 83 (118)
....+.++.|..
T Consensus 146 ~~~~v~~~~~~~ 157 (379)
T 3jrp_A 146 HAIGVNSASWAP 157 (379)
T ss_dssp CTTCEEEEEECC
T ss_pred CCCceEEEEEcC
Confidence 344566666654
No 53
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.58 E-value=0.00083 Score=49.95 Aligned_cols=54 Identities=9% Similarity=0.287 Sum_probs=34.5
Q ss_pred CccccceEEEeehhhhcCCC-C-cccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGD-N-KVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~-~-~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||+|.|||.+.-.... . ..+...+.|+++|.+|.|+|.... +.|+.| .||
T Consensus 75 s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v--~iw 134 (330)
T 2hes_X 75 AGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSV--WIW 134 (330)
T ss_dssp EEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCE--EEE
T ss_pred EEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEE--EEE
Confidence 36689999999985422111 1 123667789999999999997655 679999 999
No 54
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=96.55 E-value=0.0012 Score=47.33 Aligned_cols=54 Identities=17% Similarity=0.172 Sum_probs=40.2
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||.|.|||...--......+.....|.++|.+|.|.|...- +.+|.| .||
T Consensus 226 s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i--~iw 283 (379)
T 3jrp_A 226 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV--TLW 283 (379)
T ss_dssp EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSE--EEE
T ss_pred EEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcE--EEE
Confidence 356899999999864211001123566779999999999998776 789999 999
No 55
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=96.52 E-value=0.0012 Score=53.57 Aligned_cols=72 Identities=13% Similarity=0.139 Sum_probs=49.1
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCccc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLI 75 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~e 75 (118)
-|..||.|.|||... + ..+.....|.++|+++.|+|.... +.+|.| .|| ++-....++.| ....
T Consensus 30 ~~~~~g~v~iwd~~~---~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i--~vw~~~~~~~~~~~~~---~~~~ 99 (814)
T 3mkq_A 30 TTLYSGRVEIWNYET---Q--VEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRI--RVFNYNTGEKVVDFEA---HPDY 99 (814)
T ss_dssp EEETTSEEEEEETTT---T--EEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEE--EEEETTTCCEEEEEEC---CSSC
T ss_pred EEeCCCEEEEEECCC---C--ceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeE--EEEECCCCcEEEEEec---CCCC
Confidence 356899999999743 1 223677789999999999997766 779999 999 32222223111 2344
Q ss_pred ceeeecCc
Q psy14121 76 LGRLGLGQ 83 (118)
Q Consensus 76 i~~l~~~~ 83 (118)
|.++.|..
T Consensus 100 v~~~~~s~ 107 (814)
T 3mkq_A 100 IRSIAVHP 107 (814)
T ss_dssp EEEEEECS
T ss_pred EEEEEEeC
Confidence 66777754
No 56
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=96.47 E-value=0.0013 Score=49.86 Aligned_cols=71 Identities=24% Similarity=0.369 Sum_probs=48.1
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh--ccCCCCCCCCCCCCCcccc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW--RNLHHHFRVPGKKTFNLIL 76 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei 76 (118)
.|.+||+|.+||...- ..+.....|+++|.+|.|.|..-- +.+|.| .|| .+.....++.| ....+
T Consensus 137 sgs~dg~i~vwd~~~~-----~~~~~~~~h~~~V~~l~~~~~~~l~s~s~dg~i--~vwd~~~~~~~~~~~~---h~~~v 206 (464)
T 3v7d_B 137 TGADDKMIRVYDSINK-----KFLLQLSGHDGGVWALKYAHGGILVSGSTDRTV--RVWDIKKGCCTHVFEG---HNSTV 206 (464)
T ss_dssp EEETTSCEEEEETTTT-----EEEEEECCCSSCEEEEEECSTTEEEEEETTSCE--EEEETTTTEEEEEECC---CSSCE
T ss_pred EEcCCCcEEEEECCCC-----cEEEEEeCCCcCEEEEEEcCCCEEEEEeCCCCE--EEEECCCCcEEEEECC---CCCcc
Confidence 4678999999997431 233667789999999999875522 889999 999 33222223222 34556
Q ss_pred eeeecC
Q psy14121 77 GRLGLG 82 (118)
Q Consensus 77 ~~l~~~ 82 (118)
.||.|.
T Consensus 207 ~~l~~~ 212 (464)
T 3v7d_B 207 RCLDIV 212 (464)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 677765
No 57
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=96.47 E-value=0.0014 Score=50.47 Aligned_cols=49 Identities=20% Similarity=0.548 Sum_probs=39.3
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||+|.|||.+. + ......+.|+++|.+|.|+|...- +.||.| .||
T Consensus 125 s~s~Dg~i~vwd~~~---~--~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i--~iw 177 (410)
T 1vyh_C 125 SASEDATIKVWDYET---G--DFERTLKGHTDSVQDISFDHSGKLLASCSADMTI--KLW 177 (410)
T ss_dssp EEESSSCEEEEETTT---C--CCCEEECCCSSCEEEEEECTTSSEEEEEETTSCC--CEE
T ss_pred EEeCCCeEEEEECCC---C--cEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeE--EEE
Confidence 467899999999743 1 123667789999999999987655 789999 999
No 58
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=96.47 E-value=0.0011 Score=55.89 Aligned_cols=75 Identities=16% Similarity=0.229 Sum_probs=50.3
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCC-CC-----CCcceehhhhh--ccCC--CCCCCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQ-VV-----ATNFKIRAHLW--RNLH--HHFRVPGKKT 71 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q-~N-----gs~GEI~~fIW--nn~~--~P~t~PG~ks 71 (118)
.|.+||+|.|||... +....+.....|+++|.+|.|+|.. .+ +.+|.| .|| .+.. ....+ ..
T Consensus 26 tg~~dg~I~vwd~~~---~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I--~vwd~~~~~~~~~~~~---~~ 97 (753)
T 3jro_A 26 TCSSDKTIKIFEVEG---ETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKV--LIWKEENGRWSQIAVH---AV 97 (753)
T ss_dssp EEETTTEEEEEEEET---TEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCE--EEEEEETTEEEEEEEE---CC
T ss_pred EEECCCcEEEEecCC---CCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeE--EEEECCCCcccccccc---cC
Confidence 467899999999752 1112236778899999999999874 33 789999 999 3221 11221 12
Q ss_pred CcccceeeecCcc
Q psy14121 72 FNLILGRLGLGQS 84 (118)
Q Consensus 72 ~p~ei~~l~~~~~ 84 (118)
....|.||.|...
T Consensus 98 h~~~V~~v~~sp~ 110 (753)
T 3jro_A 98 HSASVNSVQWAPH 110 (753)
T ss_dssp CSSCEEEEEECCG
T ss_pred CCCCeEEEEECCC
Confidence 3456778888654
No 59
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=96.47 E-value=0.0015 Score=47.73 Aligned_cols=54 Identities=17% Similarity=0.172 Sum_probs=38.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||+|.|||.+.--......+.....|.++|.+++|+|...- +.||.| .||
T Consensus 224 s~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v--~lw 281 (297)
T 2pm7_B 224 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV--TLW 281 (297)
T ss_dssp EEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCE--EEE
T ss_pred EEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcE--EEE
Confidence 367899999999854110000112333679999999999998776 789999 999
No 60
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=96.47 E-value=0.002 Score=46.43 Aligned_cols=49 Identities=18% Similarity=0.412 Sum_probs=39.5
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---C---Ccceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---A---TNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---g---s~GEI~~fIW 57 (118)
.|.+||.|.|||... ...+.....|+++|.++.|+|..+- + .|+.| .||
T Consensus 254 sg~~dg~i~vwd~~~-----~~~~~~~~~h~~~v~~~~~~p~~~~l~s~~~~~d~~i--~~W 308 (312)
T 4ery_A 254 SGSEDNLVYIWNLQT-----KEIVQKLQGHTDVVISTACHPTENIIASAALENDKTI--KLW 308 (312)
T ss_dssp ECCTTSCEEEEETTT-----CCEEEEECCCSSCEEEEEECSSSSEEEEEECTTTCCE--EEE
T ss_pred EECCCCEEEEEECCC-----chhhhhhhccCCcEEEEeecCcCCceEEEEccCCccE--EEe
Confidence 477899999999742 1234778889999999999998776 3 58999 999
No 61
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=96.46 E-value=0.0015 Score=47.96 Aligned_cols=49 Identities=10% Similarity=0.003 Sum_probs=39.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.+||.|.|||... + ..+.....|.++|.++.|+|..+. +.+|.| .||
T Consensus 280 s~~~dg~v~~wd~~~---~--~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i--~iw 333 (416)
T 2pm9_A 280 SSGRDNTVLLWNPES---A--EQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKI--EVQ 333 (416)
T ss_dssp EEESSSEEEEECSSS---C--CEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEE--EEE
T ss_pred EEeCCCCEEEeeCCC---C--ccceeecCCCCceEEEEECCCCCCEEEEEecCCcE--EEE
Confidence 356899999999743 1 234777889999999999998865 779999 999
No 62
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.46 E-value=0.0019 Score=45.52 Aligned_cols=48 Identities=6% Similarity=0.206 Sum_probs=35.3
Q ss_pred cceEEEeehhhhcCCCCccc--ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 6 DGIIQMYNVDNIMSGDNKVD--ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 6 nG~I~lwdp~kIL~g~~~~l--~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
||.|.|||.+.-- ....+ .....|.++|.++.|+|...- +.+|.| .||
T Consensus 71 dg~i~iw~~~~~~--~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i--~~~ 124 (337)
T 1gxr_A 71 KGCVKVWDISHPG--NKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTL--SIW 124 (337)
T ss_dssp BSEEEEEETTSTT--CCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEE--EEE
T ss_pred CCeEEEEECCCCC--ceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcE--EEE
Confidence 8999999986421 11112 333379999999999996554 678999 999
No 63
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=96.44 E-value=0.0017 Score=49.97 Aligned_cols=54 Identities=15% Similarity=0.172 Sum_probs=43.2
Q ss_pred CccccceEEEeehhhhcCCC-----CcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGD-----NKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~-----~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.++|.|.|||..+..... ...+.....|+++|.+|+|+|...+ +.+|.| .||
T Consensus 146 t~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~dg~i--~vw 209 (430)
T 2xyi_A 146 TKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASDDHTI--CLW 209 (430)
T ss_dssp EECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECTTSCE--EEE
T ss_pred EECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeCCCeE--EEE
Confidence 46789999999998743321 1233777889999999999999885 779999 999
No 64
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.42 E-value=0.0016 Score=46.47 Aligned_cols=54 Identities=7% Similarity=0.107 Sum_probs=40.6
Q ss_pred CccccceEEEeehhhhcCC-------C------C-cccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSG-------D------N-KVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g-------~------~-~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.+||.|.|||...--.. . + ..+.....|+++|.+|.|+|.... +.+|.| .||
T Consensus 277 ~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i--~iw 349 (357)
T 3i2n_A 277 TAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTV--RVL 349 (357)
T ss_dssp EEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEE--EEE
T ss_pred EEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcE--EEE
Confidence 4678999999998642111 0 0 123677889999999999998776 568999 999
No 65
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=96.41 E-value=0.0017 Score=45.48 Aligned_cols=48 Identities=17% Similarity=0.275 Sum_probs=38.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhhc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLWR 58 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIWn 58 (118)
.|.+||.|.+||.. ..+.....|.++|.++.|.|...+ +.+|.| .||+
T Consensus 119 ~~~~d~~i~~~d~~-------~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i--~i~d 171 (313)
T 3odt_A 119 SGSWDKTAKVWKEG-------SLVYNLQAHNASVWDAKVVSFSENKFLTASADKTI--KLWQ 171 (313)
T ss_dssp EEETTSEEEEEETT-------EEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCE--EEEE
T ss_pred EEeCCCCEEEEcCC-------cEEEecccCCCceeEEEEccCCCCEEEEEECCCCE--EEEe
Confidence 36789999999921 233677789999999999997776 789999 9994
No 66
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=96.39 E-value=0.0023 Score=52.36 Aligned_cols=75 Identities=13% Similarity=0.202 Sum_probs=49.8
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhcc-CCCCCCC-CCCCCCccc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWRN-LHHHFRV-PGKKTFNLI 75 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWnn-~~~P~t~-PG~ks~p~e 75 (118)
.|..||+|.|||...- ..+.+...|+++|.+|.|+|.... +.|+.| .||+. ....+++ .+.......
T Consensus 447 sgs~Dg~v~vwd~~~~-----~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i--~iwd~~~~~~~~~~~~~~~h~~~ 519 (694)
T 3dm0_A 447 SGSWDGELRLWDLAAG-----VSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTI--KLWNTLGECKYTISEGGEGHRDW 519 (694)
T ss_dssp EEETTSEEEEEETTTT-----EEEEEEECCSSCEEEEEECTTSSCEEEEETTSCE--EEECTTSCEEEEECSSTTSCSSC
T ss_pred EEeCCCcEEEEECCCC-----cceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEE--EEEECCCCcceeeccCCCCCCCc
Confidence 3678999999997431 123667789999999999998776 789999 99932 1212110 122233445
Q ss_pred ceeeecCc
Q psy14121 76 LGRLGLGQ 83 (118)
Q Consensus 76 i~~l~~~~ 83 (118)
+.||.|..
T Consensus 520 v~~~~~~~ 527 (694)
T 3dm0_A 520 VSCVRFSP 527 (694)
T ss_dssp EEEEEECS
T ss_pred EEEEEEeC
Confidence 67777643
No 67
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=96.39 E-value=0.0014 Score=46.81 Aligned_cols=51 Identities=16% Similarity=0.313 Sum_probs=37.8
Q ss_pred CccccceEEEeehhhhcCCCCc--cccccccc--ccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNK--VDILSKKH--SGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~--~l~~~~KH--tGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.|||... ++.. .+.....| .++|.+|.|+|.... +.+|.| +||
T Consensus 304 ~~~~dg~i~vwd~~~---~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i--~iw 362 (366)
T 3k26_A 304 LGNQVGKLYVWDLEV---EDPHKAKCTTLTHHKCGAAIRQTSFSRDSSILIAVCDDASI--WRW 362 (366)
T ss_dssp EECTTSCEEEEECCS---SSGGGCEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred EEecCCcEEEEECCC---CCCccccceEEcccccCCceEEEEeCCCCCeEEEEeCCCEE--EEE
Confidence 367899999999753 1111 12355555 899999999996655 789999 999
No 68
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=96.38 E-value=0.0021 Score=47.50 Aligned_cols=53 Identities=19% Similarity=0.300 Sum_probs=39.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||+|.|||.+....+.. .......|+++|.+|.|+|...- +.||.| .||
T Consensus 233 s~s~D~~v~iw~~~~~~~~~~-~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v--~lw 289 (316)
T 3bg1_A 233 SCSQDGRVFIWTCDDASSNTW-SPKLLHKFNDVVWHVSWSITANILAVSGGDNKV--TLW 289 (316)
T ss_dssp EEETTCEEEEEECSSTTCCCC-BCCEEEECSSCEEEEEECTTTCCEEEEESSSCE--EEE
T ss_pred EEcCCCeEEEEEccCccccch-hhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeE--EEE
Confidence 367899999999865322211 11334679999999999998776 789999 999
No 69
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=96.38 E-value=0.0018 Score=48.31 Aligned_cols=72 Identities=14% Similarity=0.176 Sum_probs=49.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCCCCCCCCCCccc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHFRVPGKKTFNLI 75 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~t~PG~ks~p~e 75 (118)
.|.+||.|.|||...- ..+.....|+++|.+|.|+|.... +.|+.| .|| .......++.| ....
T Consensus 223 s~s~dg~i~iwd~~~~-----~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~v--~iwd~~~~~~~~~~~~---h~~~ 292 (321)
T 3ow8_A 223 TASDDGYIKIYDVQHA-----NLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKSV--KVWDVGTRTCVHTFFD---HQDQ 292 (321)
T ss_dssp EECTTSCEEEEETTTC-----CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEEETTTTEEEEEECC---CSSC
T ss_pred EEcCCCeEEEEECCCc-----ceeEEEcCCCCceEEEEECCCCCEEEEEeCCCcE--EEEeCCCCEEEEEEcC---CCCc
Confidence 4678999999998531 223677889999999999998766 789999 999 32222222222 2345
Q ss_pred ceeeecCc
Q psy14121 76 LGRLGLGQ 83 (118)
Q Consensus 76 i~~l~~~~ 83 (118)
+.+|.|..
T Consensus 293 v~~v~~s~ 300 (321)
T 3ow8_A 293 VWGVKYNG 300 (321)
T ss_dssp EEEEEECT
T ss_pred EEEEEECC
Confidence 77777754
No 70
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=96.36 E-value=0.0018 Score=49.25 Aligned_cols=49 Identities=18% Similarity=0.491 Sum_probs=39.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.|||.+.- ..+...+.|+++|.+|+|+|.... +.++.| .||
T Consensus 140 s~~~d~~i~iwd~~~~-----~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v--~iw 192 (393)
T 1erj_A 140 TGAEDRLIRIWDIENR-----KIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTV--RIW 192 (393)
T ss_dssp EEETTSCEEEEETTTT-----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred EEcCCCeEEEEECCCC-----cEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcE--EEE
Confidence 3678999999997531 223667889999999999997766 789999 999
No 71
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=96.33 E-value=0.0019 Score=47.73 Aligned_cols=49 Identities=18% Similarity=0.343 Sum_probs=39.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||+|.|||.+. + ..+.....|+++|.+|+|+|.... +.|+.| .||
T Consensus 82 s~s~D~~v~~wd~~~---~--~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i--~vw 134 (319)
T 3frx_A 82 SASWDKTLRLWDVAT---G--ETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTI--KVW 134 (319)
T ss_dssp EEETTSEEEEEETTT---T--EEEEEEECCSSCEEEEEECTTSCEEEEEETTSCE--EEE
T ss_pred EEeCCCEEEEEECCC---C--CeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeE--EEE
Confidence 356899999999843 1 233677889999999999997766 789999 999
No 72
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=96.32 E-value=0.0023 Score=48.26 Aligned_cols=49 Identities=12% Similarity=0.203 Sum_probs=39.3
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||.|.+||... + ..+.....|+++|.+|.|+|.... +.|+.| .||
T Consensus 215 sgs~Dg~v~~wd~~~---~--~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v--~lw 267 (354)
T 2pbi_B 215 SGGCDKKAMVWDMRS---G--QCVQAFETHESDVNSVRYYPSGDAFASGSDDATC--RLY 267 (354)
T ss_dssp EEETTSCEEEEETTT---C--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEE
T ss_pred EEeCCCeEEEEECCC---C--cEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCeE--EEE
Confidence 366899999999753 1 223667789999999999997665 789999 999
No 73
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.31 E-value=0.002 Score=48.77 Aligned_cols=50 Identities=12% Similarity=0.218 Sum_probs=39.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||+|.|||... ....+.....|.++|.+|.|+|.... +.||.| .||
T Consensus 223 sgs~D~~v~~wd~~~----~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i--~lw 276 (380)
T 3iz6_a 223 SGSCDTTVRLWDLRI----TSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTC--RLF 276 (380)
T ss_dssp EEETTSCEEEEETTT----TCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCE--EEE
T ss_pred EEECCCeEEEEECCC----CCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeE--EEE
Confidence 367899999999742 11234566789999999999997665 789999 999
No 74
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.25 E-value=0.0037 Score=45.30 Aligned_cols=49 Identities=14% Similarity=0.335 Sum_probs=40.2
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|..+|.|.+||... + ..+.....|.++|.+|.|+|.... +.+|.| .||
T Consensus 161 ~~~~~~~v~~~d~~~---~--~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i--~i~ 214 (408)
T 4a11_B 161 VGTRGPKVQLCDLKS---G--SCSHILQGHRQEILAVSWSPRYDYILATASADSRV--KLW 214 (408)
T ss_dssp EEESSSSEEEEESSS---S--CCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCE--EEE
T ss_pred EEcCCCeEEEEeCCC---c--ceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcE--EEE
Confidence 467899999999843 1 233667789999999999999886 788999 999
No 75
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=96.25 E-value=0.0028 Score=47.86 Aligned_cols=72 Identities=17% Similarity=0.193 Sum_probs=45.5
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCC-CCCCCCCCCcccc
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHH-FRVPGKKTFNLIL 76 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P-~t~PG~ks~p~ei 76 (118)
|..||.|.+||... ....+.....|.++|.+|+|+|.... +.+|.| .|| -....+ +.+. .....+
T Consensus 192 ~~~dg~i~i~d~~~----~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v--~iwd~~~~~~~~~~~---~~~~~v 262 (401)
T 4aez_A 192 GSRSGAIHHHDVRI----ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVV--QIWDARSSIPKFTKT---NHNAAV 262 (401)
T ss_dssp EETTSEEEEEETTS----SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCE--EEEETTCSSEEEEEC---CCSSCC
T ss_pred EcCCCCEEEEeccc----CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeE--EEccCCCCCccEEec---CCcceE
Confidence 45677777777632 11223667789999999999995554 678999 999 222333 2211 123446
Q ss_pred eeeecCc
Q psy14121 77 GRLGLGQ 83 (118)
Q Consensus 77 ~~l~~~~ 83 (118)
.+|.|..
T Consensus 263 ~~~~~~p 269 (401)
T 4aez_A 263 KAVAWCP 269 (401)
T ss_dssp CEEEECT
T ss_pred EEEEECC
Confidence 6676654
No 76
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.25 E-value=0.003 Score=45.15 Aligned_cols=71 Identities=10% Similarity=-0.074 Sum_probs=47.2
Q ss_pred CccccceEEEeeh-hhhcCCCCcccccccc--cccceeEEEeccCCCC----CCcceehhhhh--ccC--------CCCC
Q psy14121 2 GGCDDGIIQMYNV-DNIMSGDNKVDILSKK--HSGPVRALDFNKFQVV----ATNFKIRAHLW--RNL--------HHHF 64 (118)
Q Consensus 2 GGlenG~I~lwdp-~kIL~g~~~~l~~~~K--HtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~--------~~P~ 64 (118)
.|..||.|.+||. +.- ....... |.++|.+|.|+| ... +.++.| .|| ... .++.
T Consensus 74 ~~~~dg~i~~wd~~~~~------~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~~d~~i--~iwd~~~~~~~~~~~~~~~~ 144 (342)
T 1yfq_A 74 VGTVQGEILKVDLIGSP------SFQALTNNEANLGICRICKYG-DDKLIAASWDGLI--EVIDPRNYGDGVIAVKNLNS 144 (342)
T ss_dssp EEETTSCEEEECSSSSS------SEEECBSCCCCSCEEEEEEET-TTEEEEEETTSEE--EEECHHHHTTBCEEEEESCS
T ss_pred EEcCCCeEEEEEeccCC------ceEeccccCCCCceEEEEeCC-CCEEEEEcCCCeE--EEEcccccccccccccCCee
Confidence 3568999999997 431 2244555 999999999999 333 889999 999 321 3333
Q ss_pred CCCCCCCCcccceeeecCcc
Q psy14121 65 RVPGKKTFNLILGRLGLGQS 84 (118)
Q Consensus 65 t~PG~ks~p~ei~~l~~~~~ 84 (118)
. .-..+..+.++.|...
T Consensus 145 ~---~~~~~~~v~~~~~~~~ 161 (342)
T 1yfq_A 145 N---NTKVKNKIFTMDTNSS 161 (342)
T ss_dssp S---SSSSCCCEEEEEECSS
T ss_pred e---EEeeCCceEEEEecCC
Confidence 2 1114456777777543
No 77
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.23 E-value=0.0025 Score=48.13 Aligned_cols=77 Identities=14% Similarity=0.155 Sum_probs=48.7
Q ss_pred ccccceEEEeehhhhcC---CCCc-------c-cccccccccceeEEEeccCCCC----CCcce-ehhhhh--ccCCCCC
Q psy14121 3 GCDDGIIQMYNVDNIMS---GDNK-------V-DILSKKHSGPVRALDFNKFQVV----ATNFK-IRAHLW--RNLHHHF 64 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~---g~~~-------~-l~~~~KHtGpVraLdFNp~Q~N----gs~GE-I~~fIW--nn~~~P~ 64 (118)
|..+|.|.|||...--. .+.. . +.....|+++|.+|.|+|...- +.||. | .|| .+.....
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v--~iwd~~~~~~~~ 232 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTII--RVFKTEDGVLVR 232 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEE--EEEETTTCCEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEE--EEEECCCCcEEE
Confidence 78899999999864210 0000 1 4567889999999999996655 78897 9 999 3222222
Q ss_pred CCC-CCCCCcccceeeecCc
Q psy14121 65 RVP-GKKTFNLILGRLGLGQ 83 (118)
Q Consensus 65 t~P-G~ks~p~ei~~l~~~~ 83 (118)
++. | ..+..+.+|.|..
T Consensus 233 ~~~~g--~h~~~v~~~~~s~ 250 (355)
T 3vu4_A 233 EFRRG--LDRADVVDMKWST 250 (355)
T ss_dssp EEECT--TCCSCEEEEEECT
T ss_pred EEEcC--CCCCcEEEEEECC
Confidence 221 2 1335677777754
No 78
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.0047 Score=45.65 Aligned_cols=72 Identities=10% Similarity=0.096 Sum_probs=48.3
Q ss_pred ccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCC-CCCCCCCCCcc
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHH-FRVPGKKTFNL 74 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P-~t~PG~ks~p~ 74 (118)
|..||+|.|||.+. + ..+ .....|..+|.++.|+|...- +.+|.| .|| .+.... .++.+ ....
T Consensus 145 ~s~dg~i~~wd~~~---~--~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i--~iwd~~~~~~~~~~~~~--~h~~ 215 (343)
T 3lrv_A 145 ADNRGTIGFQSYED---D--SQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGIL--DVYNLSSPDQASSRFPV--DEEA 215 (343)
T ss_dssp EETTCCEEEEESSS---S--CEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCE--EEEESSCTTSCCEECCC--CTTS
T ss_pred EeCCCcEEEEECCC---C--cEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEE--EEEECCCCCCCccEEec--cCCC
Confidence 66899999999752 1 122 333556778999999996655 789999 999 444433 34333 1234
Q ss_pred cceeeecCc
Q psy14121 75 ILGRLGLGQ 83 (118)
Q Consensus 75 ei~~l~~~~ 83 (118)
.|.+|.|..
T Consensus 216 ~v~~l~fs~ 224 (343)
T 3lrv_A 216 KIKEVKFAD 224 (343)
T ss_dssp CEEEEEECT
T ss_pred CEEEEEEeC
Confidence 677887754
No 79
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=96.21 E-value=0.0026 Score=47.24 Aligned_cols=52 Identities=13% Similarity=0.328 Sum_probs=39.5
Q ss_pred CccccceEEEeehhhhcCCCC-cccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDN-KVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~-~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||+|.|||...- +.. ..+...+.|+++|.+|.|+|.... +.|+.| .||
T Consensus 124 s~s~D~~v~iwd~~~~--~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i--~iW 180 (330)
T 2hes_X 124 TCSRDKSVWIWETDES--GEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTV--RIW 180 (330)
T ss_dssp EEETTSCEEEEECCTT--CCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCE--EEE
T ss_pred EEeCCCEEEEEeccCC--CCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeE--EEE
Confidence 3668999999997421 111 123667889999999999997665 779999 999
No 80
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=96.20 E-value=0.0017 Score=46.36 Aligned_cols=54 Identities=13% Similarity=0.211 Sum_probs=38.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.+||.|.+||...--.-..-.......|.++|.+|.|+|.... +.+|.| .||
T Consensus 229 ~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i--~iw 287 (357)
T 3i2n_A 229 ATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGL--HLW 287 (357)
T ss_dssp EEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEE--EEE
T ss_pred EECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcE--EEe
Confidence 367899999999864211000001234489999999999998774 789999 999
No 81
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=96.16 E-value=0.0026 Score=48.06 Aligned_cols=49 Identities=12% Similarity=0.297 Sum_probs=38.0
Q ss_pred Cccccce-EEEeehhhhcCCCCccccccc--ccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGI-IQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~-I~lwdp~kIL~g~~~~l~~~~--KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||+ |.|||... + ..+.... .|.++|.+|.|+|...- +.++.| .||
T Consensus 212 s~s~d~~~v~iwd~~~---~--~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v--~iw 267 (355)
T 3vu4_A 212 TCSQDGTIIRVFKTED---G--VLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTL--HVF 267 (355)
T ss_dssp EEETTCSEEEEEETTT---C--CEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEE--EEE
T ss_pred EEeCCCCEEEEEECCC---C--cEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEE--EEE
Confidence 4678998 99999853 1 2234444 39999999999997665 788999 999
No 82
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.15 E-value=0.0026 Score=46.22 Aligned_cols=77 Identities=10% Similarity=0.055 Sum_probs=43.1
Q ss_pred CccccceEEEeehhhhcCCCC------c--cc-------ccccccccceeEEEeccCCCC----CCcceehhhhhccCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDN------K--VD-------ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWRNLHH 62 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~------~--~l-------~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWnn~~~ 62 (118)
.|..||.|.|||......... . .+ .....|.++|.+|.|+|...- +.+|.| .||+....
T Consensus 63 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i--~i~~~~~~ 140 (425)
T 1r5m_A 63 YGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSIVTGVENGEL--RLWNKTGA 140 (425)
T ss_dssp EEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEEEEEETTSCE--EEEETTSC
T ss_pred EecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEEEEEeCCCeE--EEEeCCCC
Confidence 467899999999822211111 0 01 123348999999999996554 688999 99942222
Q ss_pred C-CCCCCCCCCcccceeeecCc
Q psy14121 63 H-FRVPGKKTFNLILGRLGLGQ 83 (118)
Q Consensus 63 P-~t~PG~ks~p~ei~~l~~~~ 83 (118)
+ ..+. .....+.+|.|..
T Consensus 141 ~~~~~~---~~~~~v~~~~~~~ 159 (425)
T 1r5m_A 141 LLNVLN---FHRAPIVSVKWNK 159 (425)
T ss_dssp EEEEEC---CCCSCEEEEEECT
T ss_pred eeeecc---CCCccEEEEEECC
Confidence 2 2212 1334567777743
No 83
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=96.14 E-value=0.0026 Score=47.51 Aligned_cols=51 Identities=10% Similarity=0.226 Sum_probs=39.0
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||+|.|||... +....+.....|+++|.+|.|+|.... +.|+.| .||
T Consensus 78 s~s~D~~v~iw~~~~---~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v--~iw 132 (345)
T 3fm0_A 78 SASFDATTCIWKKNQ---DDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSV--WVW 132 (345)
T ss_dssp EEETTSCEEEEEECC---C-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEE
T ss_pred EEECCCcEEEEEccC---CCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeE--EEE
Confidence 366899999999632 111223677889999999999996655 789999 999
No 84
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=96.12 E-value=0.003 Score=45.84 Aligned_cols=48 Identities=21% Similarity=0.419 Sum_probs=38.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||.|.|||. .+ ..+.....|.++|.+|.|+|.... +.+|.| .||
T Consensus 125 ~~~~dg~i~i~~~----~~--~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i--~iw 176 (425)
T 1r5m_A 125 TGVENGELRLWNK----TG--ALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVT--ILW 176 (425)
T ss_dssp EEETTSCEEEEET----TS--CEEEEECCCCSCEEEEEECTTSSEEEEEETTCCE--EEE
T ss_pred EEeCCCeEEEEeC----CC--CeeeeccCCCccEEEEEECCCCCEEEEEecCCeE--EEE
Confidence 3678999999982 22 234677889999999999997665 778999 999
No 85
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=96.11 E-value=0.0035 Score=45.44 Aligned_cols=54 Identities=17% Similarity=0.323 Sum_probs=37.5
Q ss_pred CccccceEEEeehhhhcCCCCccc--------ccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVD--------ILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l--------~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.+||.|.|||.+.--.-..... .....|.++|.+|.|+|...+ +.+|.| .||
T Consensus 61 ~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~~d~~i--~iw 127 (408)
T 4a11_B 61 SGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSSFDKTL--KVW 127 (408)
T ss_dssp EEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEETTSEE--EEE
T ss_pred EEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEeCCCeE--EEe
Confidence 467899999999864221110000 111359999999999997665 679999 999
No 86
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=96.06 E-value=0.003 Score=47.50 Aligned_cols=49 Identities=12% Similarity=0.194 Sum_probs=37.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccc--cccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKK--HSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~K--HtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||.|.+||... + ..+...+. |.++|.+|.|+|.... +.+|.| .||
T Consensus 187 ~~~~d~~i~iwd~~~---~--~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i--~iw 241 (437)
T 3gre_A 187 ALTNLSRVIIFDIRT---L--ERLQIIENSPRHGAVSSICIDEECCVLILGTTRGII--DIW 241 (437)
T ss_dssp EEETTSEEEEEETTT---C--CEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCE--EEE
T ss_pred EEeCCCeEEEEeCCC---C--eeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeE--EEE
Confidence 467899999999854 1 22344444 9999999999998655 789999 999
No 87
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=96.06 E-value=0.0045 Score=44.20 Aligned_cols=76 Identities=14% Similarity=0.010 Sum_probs=52.3
Q ss_pred CccccceEEEeehhhhcCCCCc-ccccccccccceeEEEeccCCC-C----CCcceehhhhh-c-cCCCCCCCCCCCCCc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNK-VDILSKKHSGPVRALDFNKFQV-V----ATNFKIRAHLW-R-NLHHHFRVPGKKTFN 73 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~-~l~~~~KHtGpVraLdFNp~Q~-N----gs~GEI~~fIW-n-n~~~P~t~PG~ks~p 73 (118)
.|..||.|.|||.+.- ... .+.....|.++|.+|.|+|... . +.+|.| +|| - .......+.+. ...
T Consensus 28 ~~~~d~~v~iw~~~~~---~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i--~~wd~~~~~~~~~~~~~-~~~ 101 (342)
T 1yfq_A 28 ITSWDGSLTVYKFDIQ---AKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEI--LKVDLIGSPSFQALTNN-EAN 101 (342)
T ss_dssp EEETTSEEEEEEEETT---TTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCE--EEECSSSSSSEEECBSC-CCC
T ss_pred EEcCCCeEEEEEeCCC---CccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeE--EEEEeccCCceEecccc-CCC
Confidence 3567899999998532 211 2355568999999999999888 5 779999 999 4 55555443221 144
Q ss_pred ccceeeecCc
Q psy14121 74 LILGRLGLGQ 83 (118)
Q Consensus 74 ~ei~~l~~~~ 83 (118)
..|.+|.|..
T Consensus 102 ~~v~~l~~~~ 111 (342)
T 1yfq_A 102 LGICRICKYG 111 (342)
T ss_dssp SCEEEEEEET
T ss_pred CceEEEEeCC
Confidence 5677887754
No 88
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=96.05 E-value=0.0028 Score=48.40 Aligned_cols=54 Identities=28% Similarity=0.482 Sum_probs=39.5
Q ss_pred CccccceEEEeehhhhcCCCCc----ccccccccccceeEEEeccCCCC--CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNK----VDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~----~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW 57 (118)
.|.+||.|.+||...-...... .+.....|+++|.+|+|++..=- +.||.| .||
T Consensus 351 sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~Dg~i--~iw 410 (435)
T 1p22_A 351 SGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDDTI--LIW 410 (435)
T ss_dssp EEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSSEE--EEE
T ss_pred EEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEeCCCEEEEEeCCCEE--EEE
Confidence 4678999999998765432211 23677899999999999542221 779999 999
No 89
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=96.04 E-value=0.0031 Score=47.74 Aligned_cols=51 Identities=14% Similarity=0.273 Sum_probs=38.2
Q ss_pred CccccceEEEeehhhhcCCCCc-cc-ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNK-VD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~-~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||.|.|||... ++.. .+ .....|.++|.+|.|+|...- +.||.| .||
T Consensus 315 ~g~~dg~i~vwd~~~---~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i--~iW 371 (380)
T 3iz6_a 315 AGYSNGDCYVWDTLL---AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNL--KIW 371 (380)
T ss_dssp EECTTSCEEEEETTT---CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCE--EEE
T ss_pred EEECCCCEEEEECCC---CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCE--EEE
Confidence 467899999999732 2111 12 223679999999999997776 789999 999
No 90
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=96.04 E-value=0.0036 Score=44.13 Aligned_cols=48 Identities=17% Similarity=0.370 Sum_probs=38.6
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
|.+||.|.+||... ...+...+.|.++|.+|.|+|.... +.+|.| +||
T Consensus 159 ~~~dg~v~~~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i--~~~ 210 (337)
T 1gxr_A 159 CCSDGNIAVWDLHN-----QTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTV--RSW 210 (337)
T ss_dssp EETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred EeCCCcEEEEeCCC-----CceeeeeecccCceEEEEECCCCCEEEEEecCCcE--EEE
Confidence 56899999999853 1233667779999999999996655 689999 999
No 91
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=96.01 E-value=0.0056 Score=47.22 Aligned_cols=73 Identities=11% Similarity=0.167 Sum_probs=48.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccc-cccceeEEEecc----------CCCC----CCcceehhhhh--ccCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKK-HSGPVRALDFNK----------FQVV----ATNFKIRAHLW--RNLHHHF 64 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~K-HtGpVraLdFNp----------~Q~N----gs~GEI~~fIW--nn~~~P~ 64 (118)
-|.+||.|.|||.+.- ..+..... |.++|.+|.|+| ...- +.+|.| +|| .+...+.
T Consensus 505 ~~~~dg~i~iw~~~~~-----~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i--~iw~~~~~~~~~ 577 (615)
T 1pgu_A 505 AGDVMGKILLYDLQSR-----EVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNI--FIYSVKRPMKII 577 (615)
T ss_dssp EEETTSCEEEEETTTT-----EEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCE--EEEESSCTTCCE
T ss_pred EcCCCCeEEEeeCCCC-----cceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcE--EEEECCCCceec
Confidence 3668999999998531 12344454 999999999999 4444 678999 999 3332443
Q ss_pred C-CCCCCCCcccceeeecCcc
Q psy14121 65 R-VPGKKTFNLILGRLGLGQS 84 (118)
Q Consensus 65 t-~PG~ks~p~ei~~l~~~~~ 84 (118)
. +.| ....|.+|.|...
T Consensus 578 ~~~~~---h~~~v~~l~~s~~ 595 (615)
T 1pgu_A 578 KALNA---HKDGVNNLLWETP 595 (615)
T ss_dssp EETTS---STTCEEEEEEEET
T ss_pred hhhhc---CccceEEEEEcCC
Confidence 2 122 3456778877543
No 92
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=96.00 E-value=0.0031 Score=45.46 Aligned_cols=51 Identities=16% Similarity=0.160 Sum_probs=39.1
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.|||.+.- +-..+.....|.++|.+|.|+|.... +.+|.| .||
T Consensus 25 ~~~~d~~v~i~~~~~~---~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i--~vw 79 (372)
T 1k8k_C 25 ICPNNHEVHIYEKSGN---KWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA--YVW 79 (372)
T ss_dssp EECSSSEEEEEEEETT---EEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE--EEE
T ss_pred EEeCCCEEEEEeCCCC---cEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeE--EEE
Confidence 3568999999997531 10133677789999999999996554 778999 999
No 93
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.91 E-value=0.0033 Score=46.76 Aligned_cols=47 Identities=15% Similarity=0.181 Sum_probs=37.3
Q ss_pred ccceEEEeehhhhcCCCCccc-------ccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 5 DDGIIQMYNVDNIMSGDNKVD-------ILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 5 enG~I~lwdp~kIL~g~~~~l-------~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
+||.|.|||...- ...+ .....|++.|.+|.|+|..++ +.+|.| .||
T Consensus 196 ~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i--~iw 254 (447)
T 3dw8_B 196 DDLRINLWHLEIT----DRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGTI--RLC 254 (447)
T ss_dssp CSSEEEEEETTEE----EEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSCE--EEE
T ss_pred CCCeEEEEECCCC----CceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCeE--EEE
Confidence 7999999998631 0111 257789999999999999855 789999 999
No 94
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=95.91 E-value=0.0036 Score=51.20 Aligned_cols=53 Identities=15% Similarity=0.126 Sum_probs=39.9
Q ss_pred CccccceEEEeehhhhcCCCCccc-ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVD-ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l-~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||+|.|||..+--. ..... .+...|++.|.+|.|+|.... +.+|.| .||
T Consensus 400 s~s~D~~i~~W~~~~~~~-~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v--~vw 457 (694)
T 3dm0_A 400 SASRDKSIILWKLTKDDK-AYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL--RLW 457 (694)
T ss_dssp EEETTSEEEEEECCCSTT-CSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred EEeCCCcEEEEEccCCCc-ccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE--EEE
Confidence 467899999999753110 01112 567889999999999997665 779999 999
No 95
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=95.90 E-value=0.0039 Score=44.35 Aligned_cols=48 Identities=15% Similarity=0.363 Sum_probs=36.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEe--ccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDF--NKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdF--Np~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.|||.+. ....+...|.++|.+|.| +|.... +.+|.| .||
T Consensus 103 s~~~dg~v~iwd~~~------~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i--~vw 156 (368)
T 3mmy_A 103 TASCDKTAKMWDLSS------NQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTL--KFW 156 (368)
T ss_dssp EEETTSEEEEEETTT------TEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEE--EEE
T ss_pred EEcCCCcEEEEEcCC------CCceeeccccCceEEEEEEeCCCCCEEEEccCCCcE--EEE
Confidence 367899999999753 224456779999999999 554443 779999 999
No 96
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=95.74 E-value=0.0055 Score=46.45 Aligned_cols=49 Identities=20% Similarity=0.578 Sum_probs=39.1
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC------CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV------ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N------gs~GEI~~fIW 57 (118)
.|.+||+|.+||.+. + ..+.....|+++|.+|+|.+.... +.+|.| .||
T Consensus 178 s~s~dg~i~vwd~~~---~--~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i--~vw 232 (464)
T 3v7d_B 178 SGSTDRTVRVWDIKK---G--CCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTL--HVW 232 (464)
T ss_dssp EEETTSCEEEEETTT---T--EEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCE--EEE
T ss_pred EEeCCCCEEEEECCC---C--cEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcE--EEe
Confidence 467899999999853 1 233667789999999999986543 789999 999
No 97
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=95.74 E-value=0.0055 Score=43.60 Aligned_cols=49 Identities=20% Similarity=0.222 Sum_probs=39.1
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
|..||.|.+||...- ...+.....|.++|.+|.|+|.... +.+|.| .||
T Consensus 193 ~~~dg~i~i~d~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i--~v~ 245 (369)
T 3zwl_B 193 GHKDGKISKYDVSNN----YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNS--FLV 245 (369)
T ss_dssp EETTSEEEEEETTTT----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred EcCCCEEEEEECCCC----cEeEEEEecCCCceeEEEECCCCCEEEEecCCceE--EEE
Confidence 568899999998531 1234677789999999999997655 678999 999
No 98
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=95.71 E-value=0.0042 Score=46.24 Aligned_cols=54 Identities=13% Similarity=0.207 Sum_probs=39.5
Q ss_pred CccccceEEEeehhhhcCC-----CCc-ccccccccc------------cceeEEEeccCCC--C----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSG-----DNK-VDILSKKHS------------GPVRALDFNKFQV--V----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g-----~~~-~l~~~~KHt------------GpVraLdFNp~Q~--N----gs~GEI~~fIW 57 (118)
.|..||.|.|||.+..-.. .+- .+...+-|+ ++|.+|.|+|... . +.++.| .||
T Consensus 45 ~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i--~iw 122 (447)
T 3dw8_B 45 TGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTI--KLW 122 (447)
T ss_dssp EEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCE--EEE
T ss_pred EEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCCcceEEEeCCCCeE--EEE
Confidence 4678999999998654310 111 136677788 9999999999974 3 889999 999
No 99
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=95.66 E-value=0.0051 Score=46.84 Aligned_cols=48 Identities=15% Similarity=0.245 Sum_probs=35.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW 57 (118)
+|-+||+|.|||++.. .....-+|.+.|.+|+|+|...- ++++.+ .+|
T Consensus 152 s~~~d~~i~iwd~~~~------~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~--~~~ 202 (365)
T 4h5i_A 152 SSKVPAIMRIIDPSDL------TEKFEIETRGEVKDLHFSTDGKVVAYITGSSL--EVI 202 (365)
T ss_dssp ESCSSCEEEEEETTTT------EEEEEEECSSCCCEEEECTTSSEEEEECSSCE--EEE
T ss_pred ECCCCCEEEEeECCCC------cEEEEeCCCCceEEEEEccCCceEEeccceeE--EEE
Confidence 4567999999998542 22223369999999999997666 667777 777
No 100
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.65 E-value=0.0061 Score=50.45 Aligned_cols=50 Identities=2% Similarity=-0.063 Sum_probs=39.4
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhhc
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLWR 58 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIWn 58 (118)
.|.+|++|.|||.... ..+.....|+++|.+|+|+|..+- +.||.| .||+
T Consensus 372 s~~~d~tv~lwd~~~~-----~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv--~lwd 425 (524)
T 2j04_B 372 YSDGASSLRAVPSRAA-----FAVHPLVSRETTITAIGVSRLHPMVLAGSADGSL--IITN 425 (524)
T ss_dssp EECSSSEEEEEETTCT-----TCCEEEEECSSCEEEEECCSSCCBCEEEETTTEE--ECCB
T ss_pred EeCCCCcEEEEECccc-----ccceeeecCCCceEEEEeCCCCCeEEEEECCCEE--EEEe
Confidence 4568899999997541 122456679999999999998776 789999 9994
No 101
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=95.57 E-value=0.0066 Score=44.39 Aligned_cols=76 Identities=7% Similarity=-0.052 Sum_probs=44.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh-ccCCCC----CCCCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW-RNLHHH----FRVPGKKTF 72 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW-nn~~~P----~t~PG~ks~ 72 (118)
.|.+||.|.|||.+.-- .-........|.++|.+|.|+|.... +.++.| .|| -+..++ ..+.+ ..
T Consensus 72 s~s~d~~v~vwd~~~~~--~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i--~iwd~~~~~~~~~~~~~~~--~h 145 (377)
T 3dwl_C 72 TCSQDRNAYVYEKRPDG--TWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVI--SVCYFEQENDWWVSKHLKR--PL 145 (377)
T ss_dssp EEETTSSEEEC--------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCE--EECCC-----CCCCEEECS--SC
T ss_pred EEeCCCeEEEEEcCCCC--ceeeeeEecccCCceEEEEECCCCCEEEEEecCCeE--EEEEECCcccceeeeEeec--cc
Confidence 35689999999985421 01123667789999999999996555 678999 999 222221 11111 13
Q ss_pred cccceeeecCc
Q psy14121 73 NLILGRLGLGQ 83 (118)
Q Consensus 73 p~ei~~l~~~~ 83 (118)
...+.+|.|..
T Consensus 146 ~~~v~~~~~~~ 156 (377)
T 3dwl_C 146 RSTILSLDWHP 156 (377)
T ss_dssp CSCEEEEEECT
T ss_pred CCCeEEEEEcC
Confidence 45677777754
No 102
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=95.49 E-value=0.0074 Score=44.14 Aligned_cols=48 Identities=25% Similarity=0.272 Sum_probs=37.1
Q ss_pred cccc---ceEEEeehhhhcCCCCcccccccc-------------cccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 3 GCDD---GIIQMYNVDNIMSGDNKVDILSKK-------------HSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 3 Glen---G~I~lwdp~kIL~g~~~~l~~~~K-------------HtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
|.+| |.|.+||...- ..+..... |.++|.+|.|+|.... +.+|.| .||
T Consensus 251 ~~~d~~~g~i~i~d~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i--~iw 318 (397)
T 1sq9_A 251 AHDSNSFGCITLYETEFG-----ERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKL--RFW 318 (397)
T ss_dssp EEEETTEEEEEEEETTTC-----CEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEE--EEE
T ss_pred EecCCCCceEEEEECCCC-----cccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeE--EEE
Confidence 5567 99999998531 12344444 9999999999997666 779999 999
No 103
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=95.46 E-value=0.01 Score=49.10 Aligned_cols=60 Identities=10% Similarity=0.025 Sum_probs=40.9
Q ss_pred CccccceEEEeehhhhcCCC------CcccccccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGD------NKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHF 64 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~------~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~ 64 (118)
.|..||+|.|||...-.... ........-|+++|.+|+|+|-. . +.||.| .|| +....|.
T Consensus 230 s~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV--~lWD~~~~~~~~ 301 (524)
T 2j04_B 230 FVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFV--AEFDLTDPEVPS 301 (524)
T ss_dssp EEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEE--EEEETTBCSSCS
T ss_pred EEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEE--EEEECCCCCCce
Confidence 46789999999985421110 01123556799999999999742 3 789999 999 4444553
No 104
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.41 E-value=0.0077 Score=48.93 Aligned_cols=49 Identities=18% Similarity=0.282 Sum_probs=38.8
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||+|.|||.... ..+.....|++.|.+|.|+|...- +.|+.| .||
T Consensus 165 s~s~D~~v~lwd~~~~-----~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i--~lw 217 (611)
T 1nr0_A 165 SGSDDNTVAIFEGPPF-----KFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTI--VLY 217 (611)
T ss_dssp EEETTSCEEEEETTTB-----EEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE--EEE
T ss_pred EEeCCCeEEEEECCCC-----eEeeeeccccCceEEEEECCCCCEEEEEECCCcE--EEE
Confidence 3678999999995321 123667789999999999997655 789999 999
No 105
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=95.40 E-value=0.0064 Score=43.76 Aligned_cols=49 Identities=12% Similarity=0.054 Sum_probs=39.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW 57 (118)
.|.+||.|.+||...- ..+.....|.++|.+|.|+|...- +.++.| +||
T Consensus 219 ~~~~d~~i~i~d~~~~-----~~~~~~~~~~~~v~~~~~~~~~~~l~~~~d~~i--~i~ 270 (372)
T 1k8k_C 219 WVSHDSTVCLADADKK-----MAVATLASETLPLLAVTFITESSLVAAGHDCFP--VLF 270 (372)
T ss_dssp EEETTTEEEEEEGGGT-----TEEEEEECSSCCEEEEEEEETTEEEEEETTSSC--EEE
T ss_pred EEeCCCEEEEEECCCC-----ceeEEEccCCCCeEEEEEecCCCEEEEEeCCeE--EEE
Confidence 3568999999998642 234677789999999999996655 899999 999
No 106
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=95.35 E-value=0.0095 Score=45.26 Aligned_cols=49 Identities=14% Similarity=0.299 Sum_probs=37.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccC---CCC-------CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKF---QVV-------ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~---Q~N-------gs~GEI~~fIW 57 (118)
.|.+||.|.|||... + ..+...+-|+++|.++.|.|- .+. +.||.| .||
T Consensus 327 sgs~D~~v~iwd~~~---~--~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i--~iW 385 (393)
T 1erj_A 327 SGSKDRGVLFWDKKS---G--NPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKA--RIW 385 (393)
T ss_dssp EEETTSEEEEEETTT---C--CEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEE--EEE
T ss_pred EEeCCCeEEEEECCC---C--eEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcE--EEC
Confidence 467899999999743 1 234667789999999999983 222 789999 999
No 107
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=95.14 E-value=0.019 Score=46.65 Aligned_cols=73 Identities=11% Similarity=0.028 Sum_probs=47.9
Q ss_pred CccccceEEEeehhhhcCCCCcccc--cccccccceeEEEeccCCCC----CCcceehhhhh--ccCCCCC--CCCCCCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDI--LSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--RNLHHHF--RVPGKKT 71 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~--~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--nn~~~P~--t~PG~ks 71 (118)
.|..|++|.|||...- + ..+. ....|++.|.+|+|+|.... +.|+.| .|| +.+..+. .+.|.
T Consensus 508 s~s~d~~v~~w~~~~~--~--~~~~~~~~~~H~~~V~~v~fspdg~~lasgs~D~~v--~lW~~~~~~~~~~~~~~~h-- 579 (611)
T 1nr0_A 508 ATDQSRKVIPYSVANN--F--ELAHTNSWTFHTAKVACVSWSPDNVRLATGSLDNSV--IVWNMNKPSDHPIIIKGAH-- 579 (611)
T ss_dssp EEETTSCEEEEEGGGT--T--EESCCCCCCCCSSCEEEEEECTTSSEEEEEETTSCE--EEEETTCTTSCCEEETTSS--
T ss_pred EEcCCCCEEEEEcCCC--C--ceeeeeeeeecccceeEEEECCCCCEEEEEECCCcE--EEEECCCcccccchhhccC--
Confidence 3568999999998641 1 1111 23349999999999998776 789999 999 4444332 31221
Q ss_pred CcccceeeecC
Q psy14121 72 FNLILGRLGLG 82 (118)
Q Consensus 72 ~p~ei~~l~~~ 82 (118)
....+.+|.|.
T Consensus 580 ~~~~v~~v~fs 590 (611)
T 1nr0_A 580 AMSSVNSVIWL 590 (611)
T ss_dssp TTSCEEEEEEE
T ss_pred cccCeeEEEEc
Confidence 13456777774
No 108
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=95.01 E-value=0.013 Score=44.59 Aligned_cols=49 Identities=20% Similarity=0.423 Sum_probs=37.0
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW 57 (118)
.|.+||.|.+||... + ..+.....|+++|.+++|++..-- +.+|.| .||
T Consensus 134 sg~~dg~i~vwd~~~---~--~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i--~vw 184 (445)
T 2ovr_B 134 SGSDDNTLKVWSAVT---G--KCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL--KVW 184 (445)
T ss_dssp EEETTSCEEEEETTT---C--CEEEECCCCSSCEEEEEEETTEEEEEETTSCE--EEE
T ss_pred EEECCCcEEEEECCC---C--cEEEEEcCCCCCEEEEEecCCEEEEEeCCCeE--EEE
Confidence 467899999999853 1 233677789999999999831111 789999 999
No 109
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=94.92 E-value=0.014 Score=47.30 Aligned_cols=49 Identities=20% Similarity=0.425 Sum_probs=39.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
-|.+||.|.|||... + ..+.....|.++|++|.|+|..+. +.+|.| .||
T Consensus 72 ~~~~dg~i~vw~~~~---~--~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i--~vw 124 (814)
T 3mkq_A 72 VGSDDFRIRVFNYNT---G--EKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTV--KLW 124 (814)
T ss_dssp EEETTSEEEEEETTT---C--CEEEEEECCSSCEEEEEECSSSSEEEEEETTSEE--EEE
T ss_pred EEeCCCeEEEEECCC---C--cEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEE--EEE
Confidence 356799999999742 1 233667789999999999998877 778999 999
No 110
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=94.92 E-value=0.014 Score=49.23 Aligned_cols=54 Identities=17% Similarity=0.172 Sum_probs=40.3
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||.|.|||...--......+.....|.++|.++.|+|...- +.+|.| +||
T Consensus 224 s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I--~vw 281 (753)
T 3jro_A 224 SVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKV--TLW 281 (753)
T ss_dssp EEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCE--ECC
T ss_pred EEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEE--EEE
Confidence 366899999999864211111123666789999999999997666 789999 999
No 111
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=94.87 E-value=0.014 Score=50.32 Aligned_cols=49 Identities=18% Similarity=0.340 Sum_probs=39.7
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
-|.+||+|.|||... + ..+...+.|+++|.+|.|+|.... +.+|.| .||
T Consensus 632 s~~~d~~i~vw~~~~---~--~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v--~vw 684 (1249)
T 3sfz_A 632 SCGADKTLQVFKAET---G--EKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKV--KIW 684 (1249)
T ss_dssp EEETTSCEEEEETTT---C--CEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred EEeCCCeEEEEECCC---C--CEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeE--EEE
Confidence 356899999999843 1 234677789999999999997666 788999 999
No 112
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=94.84 E-value=0.023 Score=43.85 Aligned_cols=73 Identities=16% Similarity=0.160 Sum_probs=47.8
Q ss_pred ccccceEEEeehhhhcCCCCccccccccccc---ceeEEEeccC-CCC----CCcceehhhhh-ccCCCCC-CC-CCCCC
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSG---PVRALDFNKF-QVV----ATNFKIRAHLW-RNLHHHF-RV-PGKKT 71 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtG---pVraLdFNp~-Q~N----gs~GEI~~fIW-nn~~~P~-t~-PG~ks 71 (118)
|.+||.|.+||.... ..+.....|.+ +|.+|.|+|. ... +.+|.| .|| -...++. .+ .....
T Consensus 179 ~~~d~~v~vwd~~~~-----~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i--~vwd~~~~~~~~~~~~~~~~ 251 (615)
T 1pgu_A 179 VGDDGSVVFYQGPPF-----KFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKI--SCFDGKSGEFLKYIEDDQEP 251 (615)
T ss_dssp EETTTEEEEEETTTB-----EEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCE--EEEETTTCCEEEECCBTTBC
T ss_pred EeCCCcEEEEeCCCc-----ceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeE--EEEECCCCCEeEEecccccc
Confidence 568999999996321 22366777999 9999999998 554 679999 999 2223332 21 10002
Q ss_pred CcccceeeecC
Q psy14121 72 FNLILGRLGLG 82 (118)
Q Consensus 72 ~p~ei~~l~~~ 82 (118)
....+.+|.|.
T Consensus 252 ~~~~v~~~~~~ 262 (615)
T 1pgu_A 252 VQGGIFALSWL 262 (615)
T ss_dssp CCSCEEEEEES
T ss_pred cCCceEEEEEc
Confidence 34557777774
No 113
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=94.46 E-value=0.02 Score=43.65 Aligned_cols=72 Identities=14% Similarity=0.297 Sum_probs=44.9
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh-ccCCCC-CCCCCCCCCcccce
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW-RNLHHH-FRVPGKKTFNLILG 77 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW-nn~~~P-~t~PG~ks~p~ei~ 77 (118)
.|..||.|.+||... + ..+.....|+++|.+|.|+...-- +.+|.| .|| -...++ .++.| ....+.
T Consensus 148 ~g~~dg~i~iwd~~~---~--~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i--~vwd~~~~~~~~~~~~---h~~~v~ 217 (435)
T 1p22_A 148 SGLRDNTIKIWDKNT---L--ECKRILTGHTGSVLCLQYDERVIITGSSDSTV--RVWDVNTGEMLNTLIH---HCEAVL 217 (435)
T ss_dssp EEESSSCEEEEESSS---C--CEEEEECCCSSCEEEEECCSSEEEEEETTSCE--EEEESSSCCEEEEECC---CCSCEE
T ss_pred EEeCCCeEEEEeCCC---C--eEEEEEcCCCCcEEEEEECCCEEEEEcCCCeE--EEEECCCCcEEEEEcC---CCCcEE
Confidence 467899999999743 1 223667789999999999321101 789999 999 222222 12122 233466
Q ss_pred eeecCc
Q psy14121 78 RLGLGQ 83 (118)
Q Consensus 78 ~l~~~~ 83 (118)
+|.|..
T Consensus 218 ~l~~~~ 223 (435)
T 1p22_A 218 HLRFNN 223 (435)
T ss_dssp EEECCT
T ss_pred EEEEcC
Confidence 666653
No 114
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=94.42 E-value=0.016 Score=46.02 Aligned_cols=76 Identities=9% Similarity=-0.042 Sum_probs=49.2
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh--c-cCCCCCCCCCC--CCC
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW--R-NLHHHFRVPGK--KTF 72 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW--n-n~~~P~t~PG~--ks~ 72 (118)
.|..||+|.|||...- ..+.....|...|.+|.|+|.... +.+|.| .|| + ....-+..|-. ...
T Consensus 167 s~s~Dg~v~iwD~~~~-----~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v--~iwd~~~~~~~~~~~~~~~~~~~ 239 (434)
T 2oit_A 167 VCLADGSIAVLQVTET-----VKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTV--VQYLPTLQEKKVIPCPPFYESDH 239 (434)
T ss_dssp EEETTSCEEEEEESSS-----EEEEEEECGGGCEEEEEECTTSSCEEEEETTSCE--EEECTTCCEEEEECCCTTCCTTS
T ss_pred EEECCCeEEEEEcCCC-----cceeeccCCCCceeEEEEcCCCCEEEEEcCCCcE--EEEccCCcccccccCCcccCCCC
Confidence 3678999999998532 122344568999999999998665 789999 999 3 11111111100 112
Q ss_pred cccceeeecCcc
Q psy14121 73 NLILGRLGLGQS 84 (118)
Q Consensus 73 p~ei~~l~~~~~ 84 (118)
+..+.+|.|...
T Consensus 240 ~~~v~~v~w~~~ 251 (434)
T 2oit_A 240 PVRVLDVLWIGT 251 (434)
T ss_dssp CEEEEEEEEEET
T ss_pred ceeEEEEEEecC
Confidence 357888999653
No 115
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=94.36 E-value=0.053 Score=36.94 Aligned_cols=47 Identities=9% Similarity=0.036 Sum_probs=37.1
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW 57 (118)
+-.++.|.+||.+. ........|.+.|.++.|+|.... +.++.| ++|
T Consensus 18 ~~~~~~i~~~d~~~------~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~i--~~~ 67 (297)
T 2ojh_A 18 GSMRSSIEIFNIRT------RKMRVVWQTPELFEAPNWSPDGKYLLLNSEGLL--YRL 67 (297)
T ss_dssp CCCCEEEEEEETTT------TEEEEEEEESSCCEEEEECTTSSEEEEEETTEE--EEE
T ss_pred CCcceeEEEEeCCC------CceeeeccCCcceEeeEECCCCCEEEEEcCCeE--EEE
Confidence 34689999999742 123455669999999999998776 778999 999
No 116
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=94.20 E-value=0.029 Score=42.65 Aligned_cols=74 Identities=12% Similarity=0.249 Sum_probs=45.1
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh--ccCCCCCCCCCCCCCccccee
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW--RNLHHHFRVPGKKTFNLILGR 78 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW--nn~~~P~t~PG~ks~p~ei~~ 78 (118)
|..||.|.+||... ...+.....|.+.|.++.|++..-- +.+|.| .|| .+.....++.+.......+.+
T Consensus 295 ~~~d~~i~i~d~~~-----~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i--~vwd~~~~~~~~~~~~~~~~~~~v~~ 367 (445)
T 2ovr_B 295 GSLDTSIRVWDVET-----GNCIHTLTGHQSLTSGMELKDNILVSGNADSTV--KIWDIKTGQCLQTLQGPNKHQSAVTC 367 (445)
T ss_dssp EETTSCEEEEETTT-----CCEEEEECCCCSCEEEEEEETTEEEEEETTSCE--EEEETTTCCEEEEECSTTSCSSCEEE
T ss_pred EeCCCeEEEEECCC-----CCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeE--EEEECCCCcEEEEEccCCCCCCCEEE
Confidence 55678888887643 1123666788999999988642111 678999 999 232222222333334556777
Q ss_pred eecCc
Q psy14121 79 LGLGQ 83 (118)
Q Consensus 79 l~~~~ 83 (118)
+.|..
T Consensus 368 ~~~~~ 372 (445)
T 2ovr_B 368 LQFNK 372 (445)
T ss_dssp EEECS
T ss_pred EEECC
Confidence 87754
No 117
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=93.84 E-value=0.023 Score=47.05 Aligned_cols=49 Identities=12% Similarity=0.135 Sum_probs=35.0
Q ss_pred CccccceEEEeehhhhcCCCCccccccccccccee-EEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVR-ALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVr-aLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|..||+|.|||... | ..+...+-|+..|. .|.|.|..+- ..|+.| .||
T Consensus 300 SgS~DgTIkIWDl~t---G--k~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TI--klW 353 (356)
T 2w18_A 300 AILTSGTIAIWDLLL---G--QCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNI--FVY 353 (356)
T ss_dssp EEETTSCEEEEETTT---C--SEEEEECCC--CCCCEEEECSSSSEEEEECTTSCE--EEE
T ss_pred EEcCCCcEEEEECCC---C--cEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcE--EEe
Confidence 456899999999832 2 12366667887655 5999997766 789999 999
No 118
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=93.78 E-value=0.031 Score=48.87 Aligned_cols=47 Identities=9% Similarity=0.228 Sum_probs=35.6
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
-|..||+|.|||.... .......|+++|++|.|+| ..- +.++.| .||
T Consensus 34 sgs~Dg~I~lw~~~~~------~~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v--~lW 84 (902)
T 2oaj_A 34 IATVTGEVHIYGQQQV------EVVIKLEDRSAIKEMRFVK-GIYLVVINAKDTV--YVL 84 (902)
T ss_dssp EEETTSEEEEECSTTC------EEEEECSSCCCEEEEEEET-TTEEEEEETTCEE--EEE
T ss_pred EEeCCCEEEEEeCCCc------EEEEEcCCCCCEEEEEEcC-CCEEEEEECcCeE--EEE
Confidence 4678999999997431 2222345899999999999 333 789999 999
No 119
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=93.73 E-value=0.029 Score=49.02 Aligned_cols=54 Identities=17% Similarity=0.201 Sum_probs=38.0
Q ss_pred CccccceEEEeehhhhcCCCCccc-ccc-----cccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVD-ILS-----KKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l-~~~-----~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
-|.+||+|.|||.+.-.-.....+ ... ..|+++|.+|.|.|...- +.+|.| .||
T Consensus 452 Sgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV--~lw 515 (902)
T 2oaj_A 452 TGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDV--VLF 515 (902)
T ss_dssp EEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCE--EEE
T ss_pred EecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEE--EEE
Confidence 367899999999854210000111 111 279999999999998777 789999 999
No 120
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=93.72 E-value=0.057 Score=47.43 Aligned_cols=73 Identities=5% Similarity=0.097 Sum_probs=48.2
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccc-----eeEEEeccCCCC----CCcceehhhhh----ccCCCC-----
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGP-----VRALDFNKFQVV----ATNFKIRAHLW----RNLHHH----- 63 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGp-----VraLdFNp~Q~N----gs~GEI~~fIW----nn~~~P----- 63 (118)
.+..||+|.|||.+. .+.... |.++ |++|.|+|...- +.||+| -|| .....|
T Consensus 102 s~s~dg~V~iwd~~~-------~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtV--kIWd~~~~~l~~~~~i~l 171 (588)
T 2j04_A 102 VLSNNGNVSVFKDNK-------MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGEL--QFFSIRKNSENTPEFYFE 171 (588)
T ss_dssp EEETTSCEEEEETTE-------EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEE--EEEECCCCTTTCCCCEEE
T ss_pred EEeCCCcEEEEeCCc-------eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEE--EEEECCCCccccccceee
Confidence 456899999999544 235555 7775 999999998777 779999 999 211122
Q ss_pred --CCCCCCCCCcccceeeecCcce
Q psy14121 64 --FRVPGKKTFNLILGRLGLGQSF 85 (118)
Q Consensus 64 --~t~PG~ks~p~ei~~l~~~~~~ 85 (118)
+. .+......-|.+|+|....
T Consensus 172 ~ti~-~~~~gh~~~V~sVawSPdg 194 (588)
T 2j04_A 172 SSIR-LSDAGSKDWVTHIVWYEDV 194 (588)
T ss_dssp EEEE-CSCTTCCCCEEEEEEETTE
T ss_pred eeee-cccccccccEEEEEEcCCc
Confidence 21 1111134578888887543
No 121
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=93.54 E-value=0.039 Score=47.53 Aligned_cols=49 Identities=14% Similarity=0.339 Sum_probs=39.5
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.+||... + ..+.....|+++|.++.|+|.... +.+|.| .||
T Consensus 718 sg~~d~~v~vwd~~~---~--~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~dg~v--~vw 770 (1249)
T 3sfz_A 718 TGSNDFFLKLWDLNQ---K--ECRNTMFGHTNSVNHCRFSPDDELLASCSADGTL--RLW 770 (1249)
T ss_dssp EEETTSCEEEEETTS---S--SEEEEECCCSSCEEEEEECSSTTEEEEEESSSEE--EEE
T ss_pred EEeCCCeEEEEECCC---c--chhheecCCCCCEEEEEEecCCCEEEEEECCCeE--EEE
Confidence 467899999999743 1 233667789999999999997665 788999 999
No 122
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.94 E-value=0.068 Score=41.04 Aligned_cols=47 Identities=15% Similarity=0.053 Sum_probs=35.1
Q ss_pred ccccceEEEeehhhhcCCCCccccc-ccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDIL-SKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~-~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
|..||.|.|||... + ..+.. ...|+++|.+|.|+ ...- +.++.| .||
T Consensus 216 ~~~d~~i~vwd~~~---~--~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v--~vw 267 (450)
T 2vdu_B 216 SDRDEHIKISHYPQ---C--FIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKI--FAW 267 (450)
T ss_dssp EETTSCEEEEEESC---T--TCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEE--EEE
T ss_pred EcCCCcEEEEECCC---C--ceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeE--EEE
Confidence 56789999999742 1 12333 56799999999999 3333 789999 999
No 123
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=92.48 E-value=0.062 Score=41.27 Aligned_cols=53 Identities=11% Similarity=-0.059 Sum_probs=36.5
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
.|.+||.|.|||...- .+..........|.+.|.+|.|+|.... +.+|.| ++|
T Consensus 120 ~~~~dg~v~iwd~~~~-~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v--~~~ 176 (450)
T 2vdu_B 120 CADSDKSLLVFDVDKT-SKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDV--YSI 176 (450)
T ss_dssp EEGGGTEEEEEEECSS-SSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEE--EEE
T ss_pred EECCCCeEEEEECcCC-CCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcE--EEE
Confidence 3568999999998420 1111111233467899999999997766 567889 999
No 124
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=92.16 E-value=0.1 Score=38.75 Aligned_cols=49 Identities=4% Similarity=0.044 Sum_probs=38.4
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.+.++|.|.+||.+. ...+.+...|...|.++.|+|.... ..++.| ++|
T Consensus 186 s~~~d~~v~~~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i--~~~ 239 (433)
T 3bws_A 186 SQMQANAVHVFDLKT-----LAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDI--SVI 239 (433)
T ss_dssp EEGGGTEEEEEETTT-----CCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEE--EEE
T ss_pred EECCCCEEEEEECCC-----ceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcE--EEE
Confidence 466899999999842 1223566689999999999998776 368999 999
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=90.34 E-value=0.066 Score=39.82 Aligned_cols=51 Identities=14% Similarity=0.219 Sum_probs=36.8
Q ss_pred CccccceEEEeehhhhcCCCCcc-c--ccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKV-D--ILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~-l--~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
++.++|.|.+||++. ++... . .....|.+.|.++.|.|...- ..++.| ++|
T Consensus 139 ~~~~~~~i~~~d~~~---g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v--~~~ 196 (433)
T 3bws_A 139 PLLEDEGMDVLDINS---GQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAV--HVF 196 (433)
T ss_dssp EBTTSSSEEEEETTT---CCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEE--EEE
T ss_pred EeCCCCeEEEEECCC---CeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEE--EEE
Confidence 456789999999753 22111 1 255689999999999775544 667999 999
No 126
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=89.34 E-value=0.23 Score=36.38 Aligned_cols=48 Identities=10% Similarity=0.003 Sum_probs=35.0
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.|.+||.|.+||.+.- ..+.....| +.|.++.|+|.... ..++.| .||
T Consensus 7 s~~~d~~v~v~d~~~~-----~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~d~~i--~v~ 59 (391)
T 1l0q_A 7 ANSESDNISVIDVTSN-----KVTATIPVG-SNPMGAVISPDGTKVYVANAHSNDV--SII 59 (391)
T ss_dssp EETTTTEEEEEETTTT-----EEEEEEECS-SSEEEEEECTTSSEEEEEEGGGTEE--EEE
T ss_pred EcCCCCEEEEEECCCC-----eEEEEeecC-CCcceEEECCCCCEEEEECCCCCeE--EEE
Confidence 4678999999998531 122334444 45899999998876 478999 999
No 127
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=87.84 E-value=0.37 Score=35.22 Aligned_cols=48 Identities=2% Similarity=-0.007 Sum_probs=34.0
Q ss_pred CccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.+..+|.|.+||.+. ..+.+.-.+.+.|.++.|+|.... ..++.| +||
T Consensus 49 ~~~~d~~i~v~d~~~------~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~v--~v~ 101 (391)
T 1l0q_A 49 ANAHSNDVSIIDTAT------NNVIATVPAGSSPQGVAVSPDGKQVYVTNMASSTL--SVI 101 (391)
T ss_dssp EEGGGTEEEEEETTT------TEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEE--EEE
T ss_pred ECCCCCeEEEEECCC------CeEEEEEECCCCccceEECCCCCEEEEEECCCCEE--EEE
Confidence 355789999999843 123222233449999999998776 356999 999
No 128
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=86.48 E-value=0.31 Score=34.34 Aligned_cols=50 Identities=12% Similarity=0.211 Sum_probs=35.9
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CC-cceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----AT-NFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs-~GEI~~fIW 57 (118)
+..+|.|.+||.+. .+.. .......|.+.+.+|.|+|.... +. ++.| .||
T Consensus 11 ~~~~~~v~~~~~~~--~~~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v--~~~ 65 (343)
T 1ri6_A 11 SPESQQIHVWNLNH--EGAL-TLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRV--LAY 65 (343)
T ss_dssp EGGGTEEEEEEECT--TSCE-EEEEEEECSSCCCCEEECTTSSEEEEEETTTTEE--EEE
T ss_pred CCCCCeEEEEEECC--CCcE-EEeeeEecCCCCceEEECCCCCEEEEeecCCCeE--EEE
Confidence 45789999999854 2221 12344568889999999998776 33 3899 999
No 129
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=86.32 E-value=0.31 Score=42.82 Aligned_cols=75 Identities=9% Similarity=0.062 Sum_probs=46.9
Q ss_pred CccccceEEEeehhhhcCCCCc--cccc----ccccccceeEEEeccCCCC---CCcceehhhhh-ccCCC----CCCC-
Q psy14121 2 GGCDDGIIQMYNVDNIMSGDNK--VDIL----SKKHSGPVRALDFNKFQVV---ATNFKIRAHLW-RNLHH----HFRV- 66 (118)
Q Consensus 2 GGlenG~I~lwdp~kIL~g~~~--~l~~----~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW-nn~~~----P~t~- 66 (118)
-|.+||+|.|||+..=.-.+.. .+.. ..-|.+.|.+|+|.|.. - +.|+.| ++| -+-.. +-++
T Consensus 146 sgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg-Laass~D~tV--rlWd~~~~~~~~~~~tL~ 222 (588)
T 2j04_A 146 VGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV-LVAALSNNSV--FSMTVSASSHQPVSRMIQ 222 (588)
T ss_dssp EEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE-EEEEETTCCE--EEECCCSSSSCCCEEEEE
T ss_pred EEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc-EEEEeCCCeE--EEEECCCCccccceeeec
Confidence 4789999999998641000000 1122 35688999999999977 6 788999 999 21111 1121
Q ss_pred CCCCCCcccceeeecC
Q psy14121 67 PGKKTFNLILGRLGLG 82 (118)
Q Consensus 67 PG~ks~p~ei~~l~~~ 82 (118)
+| ....+.+|+|.
T Consensus 223 ~~---h~~~V~svaFs 235 (588)
T 2j04_A 223 NA---SRRKITDLKIV 235 (588)
T ss_dssp CC---CSSCCCCEEEE
T ss_pred cc---ccCcEEEEEEE
Confidence 33 33667777774
No 130
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=75.68 E-value=0.71 Score=32.47 Aligned_cols=50 Identities=8% Similarity=0.046 Sum_probs=33.3
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
+.++|.|.+||.+ ++......+...+...+.++.|+|.... ..++.| ++|
T Consensus 102 ~~~~~~i~~~d~~---~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v--~~~ 156 (343)
T 1ri6_A 102 SYNAGNVSVTRLE---DGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRI--CLF 156 (343)
T ss_dssp ETTTTEEEEEEEE---TTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEE--EEE
T ss_pred ecCCCeEEEEECC---CCccccccccccCCCCceEEEECCCCCEEEEecCCCCEE--EEE
Confidence 4468999999985 2322222222233446899999998776 268899 999
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=73.90 E-value=2.7 Score=32.51 Aligned_cols=43 Identities=7% Similarity=0.070 Sum_probs=33.1
Q ss_pred ceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCc---ceehhhhh
Q psy14121 7 GIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATN---FKIRAHLW 57 (118)
Q Consensus 7 G~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~---GEI~~fIW 57 (118)
+.|.+||.+ +. .......|.+.|.++.|+|.... ..+ ..| +||
T Consensus 159 ~~i~i~d~~----g~--~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i--~~~ 208 (415)
T 2hqs_A 159 YELRVSDYD----GY--NQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSAL--VIQ 208 (415)
T ss_dssp EEEEEEETT----SC--SCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEE--EEE
T ss_pred ceEEEEcCC----CC--CCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEE--EEE
Confidence 899999984 22 23556679999999999998776 233 489 999
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=67.67 E-value=3.8 Score=29.04 Aligned_cols=47 Identities=6% Similarity=-0.202 Sum_probs=32.7
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
+.++|.|.+||++. + ..+....-+..++ +|.|+|.... ..++.| ++|
T Consensus 16 ~~~~~~v~~~d~~~---~--~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i--~~~ 67 (331)
T 3u4y_A 16 EQHLRRISFFSTDT---L--EILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTL--VQI 67 (331)
T ss_dssp EGGGTEEEEEETTT---C--CEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEE--EEE
T ss_pred ecCCCeEEEEeCcc---c--ceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeE--EEE
Confidence 45789999999843 2 1223334456667 9999998875 446789 999
No 133
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=63.82 E-value=3.6 Score=28.74 Aligned_cols=47 Identities=0% Similarity=-0.189 Sum_probs=31.8
Q ss_pred ccccceEEEeehhhhcCCCCccccccccccc---ceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSG---PVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtG---pVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
+..+|.|.+||++.- .+.+.-.+.+ .+.++.|+|.... ..+++| ++|
T Consensus 7 ~~~~~~v~~~d~~~~------~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v--~~~ 61 (337)
T 1pby_B 7 PARPDKLVVIDTEKM------AVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESL--VKI 61 (337)
T ss_dssp EETTTEEEEEETTTT------EEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEE--EEE
T ss_pred cCCCCeEEEEECCCC------cEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeE--EEE
Confidence 456899999998531 2212222233 5889999998765 456889 999
No 134
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=63.46 E-value=12 Score=28.88 Aligned_cols=43 Identities=9% Similarity=0.050 Sum_probs=31.4
Q ss_pred ceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CC--cceehhhhh
Q psy14121 7 GIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----AT--NFKIRAHLW 57 (118)
Q Consensus 7 G~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs--~GEI~~fIW 57 (118)
..|.+||.+. + ...+...|.+.|.++.|+|.... .. +.+| |+|
T Consensus 203 ~~i~~~d~~t---g---~~~~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i--~~~ 252 (415)
T 2hqs_A 203 SALVIQTLAN---G---AVRQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNL--YVM 252 (415)
T ss_dssp CEEEEEETTT---C---CEEEEECCSSCEEEEEECTTSSEEEEEECTTSSCEE--EEE
T ss_pred cEEEEEECCC---C---cEEEeecCCCcccCEEEcCCCCEEEEEEecCCCceE--EEE
Confidence 4899999852 2 22456678899999999998775 22 4458 999
No 135
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=62.26 E-value=3.4 Score=33.67 Aligned_cols=44 Identities=7% Similarity=0.002 Sum_probs=28.6
Q ss_pred ccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 5 DDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 5 enG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
++|.|.+||...++.+ .....|.-+|..+.+. .++ .++|+| +||
T Consensus 104 ~~~~l~v~dv~sl~~~-----~~~~~~~~~v~~i~~~--~p~~av~~~dG~L--~v~ 151 (388)
T 1xip_A 104 TRNALYSLDLEELSEF-----RTVTSFEKPVFQLKNV--NNTLVILNSVNDL--SAL 151 (388)
T ss_dssp ESSEEEEEESSSTTCE-----EEEEECSSCEEEEEEC--SSEEEEEETTSEE--EEE
T ss_pred cCCcEEEEEchhhhcc-----CccceeecceeeEEec--CCCEEEEECCCCE--EEE
Confidence 6788888988877643 2334555566655444 334 577888 888
No 136
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=61.61 E-value=7 Score=31.33 Aligned_cols=47 Identities=11% Similarity=0.101 Sum_probs=31.2
Q ss_pred cccceEEEeehhhhcCCCCccccccccccc---ceeEEEeccCCCC---CC----------cceehhhhh
Q psy14121 4 CDDGIIQMYNVDNIMSGDNKVDILSKKHSG---PVRALDFNKFQVV---AT----------NFKIRAHLW 57 (118)
Q Consensus 4 lenG~I~lwdp~kIL~g~~~~l~~~~KHtG---pVraLdFNp~Q~N---gs----------~GEI~~fIW 57 (118)
..||+|.+||++. ++.. .....|+. .|.++.|+|.... ++ ++.| +||
T Consensus 34 ~~dg~i~~~d~~~---g~~~--~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i--~~~ 96 (723)
T 1xfd_A 34 EQKGTVRLWNVET---NTST--VLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYY--VLS 96 (723)
T ss_dssp CSSSCEEEBCGGG---CCCE--EEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEE--EEE
T ss_pred eCCCCEEEEECCC---CcEE--EEeccccccccccceEEECCCCCEEEEEecCccceeecceeeE--EEE
Confidence 3688999999854 2211 22233444 4999999998775 22 2788 999
No 137
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=60.20 E-value=8.5 Score=25.84 Aligned_cols=49 Identities=16% Similarity=0.337 Sum_probs=34.5
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
+..+|.+.||+.+. . .........|.+.|..+.|+|.... ..++.+ .||
T Consensus 147 ~~~~~~~~l~~~~~--~--~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~--~i~ 200 (297)
T 2ojh_A 147 GIRDQVFDIYSMDI--D--SGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQM--QIW 200 (297)
T ss_dssp EEETTEEEEEEEET--T--TCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSC--EEE
T ss_pred ECCCCceEEEEEEC--C--CCcceEcccCCCccccceECCCCCEEEEEecCCCCc--cEE
Confidence 34678888887542 1 1223556678899999999998776 247788 888
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=58.43 E-value=7.9 Score=31.22 Aligned_cols=46 Identities=7% Similarity=0.050 Sum_probs=34.2
Q ss_pred ceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121 7 GIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW 57 (118)
Q Consensus 7 G~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW 57 (118)
|.|.+||.+. +....+.+...|.+.|..+.|.|.... +++++| |||
T Consensus 129 ~~i~~~d~~~---~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i--~~~ 177 (741)
T 2ecf_A 129 GELYLYDLKQ---EGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNL--WVI 177 (741)
T ss_dssp TEEEEEESSS---CSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEE--EEE
T ss_pred CcEEEEECCC---CCcceEEEcccCCcccccccCCCCCCEEEEEeCCcE--EEE
Confidence 7888998742 100023566778899999999998776 667899 999
No 139
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=56.15 E-value=5 Score=28.94 Aligned_cols=50 Identities=10% Similarity=0.124 Sum_probs=33.5
Q ss_pred cccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 4 CDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 4 lenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
..++.|.+||.+. .|.-..+.....|...+++|.|.|.... ..++.| .||
T Consensus 259 ~~~~~v~v~~~~~--~g~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v--~v~ 313 (347)
T 3hfq_A 259 RGYNTLAVFAVTA--DGHLTLIQQISTEGDFPRDFDLDPTEAFVVVVNQNTDNA--TLY 313 (347)
T ss_dssp ETTTEEEEEEECG--GGCEEEEEEEECSSSCCCEEEECTTSSEEEEEETTTTEE--EEE
T ss_pred CCCCEEEEEEECC--CCcEEEeEEEecCCCCcCeEEECCCCCEEEEEEcCCCcE--EEE
Confidence 3578899999752 2211123555566677899999998775 334778 888
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=52.67 E-value=6.2 Score=31.62 Aligned_cols=47 Identities=9% Similarity=0.022 Sum_probs=33.8
Q ss_pred cceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121 6 DGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW 57 (118)
Q Consensus 6 nG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW 57 (118)
++.|.|||.+. +....+.....|...|..+.|+|.... +++++| |+|
T Consensus 90 ~~~i~~~d~~~---~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i--~~~ 139 (723)
T 1xfd_A 90 TGYYVLSKIPH---GDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNI--YYC 139 (723)
T ss_dssp CSEEEEEESSS---CCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEE--EEE
T ss_pred eeeEEEEECCC---CceEeccCCccccccccccEECCCCCEEEEEECCeE--EEE
Confidence 47889998742 222223444567777999999998877 667899 999
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=51.04 E-value=5.3 Score=32.13 Aligned_cols=45 Identities=11% Similarity=0.093 Sum_probs=34.0
Q ss_pred ccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121 5 DDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW 57 (118)
Q Consensus 5 enG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW 57 (118)
.+|.|.+||.+. ..+.+...|.+.|..+.|+|.... ..++.| +||
T Consensus 99 ~~~~i~~~d~~~------~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i--~v~ 146 (706)
T 2z3z_A 99 TQGGLVGFDMLA------RKVTYLFDTNEETASLDFSPVGDRVAYVRNHNL--YIA 146 (706)
T ss_dssp ETTEEEEEETTT------TEEEEEECCTTCCTTCEECTTSSEEEEEETTEE--EEE
T ss_pred ECCEEEEEECCC------CceEEccCCcccccCCcCCCCCCEEEEEECCeE--EEE
Confidence 358899999732 123445567888999999998776 678999 999
No 142
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=49.73 E-value=9.7 Score=26.73 Aligned_cols=48 Identities=6% Similarity=-0.239 Sum_probs=31.4
Q ss_pred ccccceEEEeehhhhcCCCCccccccccc-ccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKH-SGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KH-tGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
+..+|.|.+||++. + ..+.+..-+ .+.+.++.|.|.... ..++.| ++|
T Consensus 17 ~~~~~~v~~~d~~~---~--~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i--~~~ 70 (349)
T 1jmx_B 17 TNYPNNLHVVDVAS---D--TVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDI--YGI 70 (349)
T ss_dssp EETTTEEEEEETTT---T--EEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEE--EEE
T ss_pred eCCCCeEEEEECCC---C--cEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcE--EEE
Confidence 45789999999853 1 112222222 225788999987764 457889 999
No 143
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=49.17 E-value=15 Score=25.85 Aligned_cols=48 Identities=10% Similarity=0.013 Sum_probs=30.9
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccc---------eeEEEeccCCCC------CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGP---------VRALDFNKFQVV------ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGp---------VraLdFNp~Q~N------gs~GEI~~fIW 57 (118)
+..+|.|.+||++. + ..+.....|.+. ++++.|.|.... +.++.| ++|
T Consensus 107 ~~~~~~v~~~d~~~---~--~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i--~~~ 169 (353)
T 3vgz_A 107 NTVNSAVTAIDAKT---G--EVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVI--WVV 169 (353)
T ss_dssp ETTTTEEEEEETTT---C--CEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEE--EEE
T ss_pred ecCCCEEEEEeCCC---C--eeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceE--EEE
Confidence 34578999999853 1 112333333332 688999997765 347889 999
No 144
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=48.38 E-value=8.7 Score=31.60 Aligned_cols=47 Identities=15% Similarity=0.169 Sum_probs=35.6
Q ss_pred ccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-------CCcceehhhhh
Q psy14121 5 DDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-------ATNFKIRAHLW 57 (118)
Q Consensus 5 enG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-------gs~GEI~~fIW 57 (118)
-|+.|++|+... +| ..+....-|+..|+.|.|.|-|.. +.|+.| -||
T Consensus 155 ~d~~V~~~~~s~--dG--~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TI--kIW 208 (356)
T 2w18_A 155 SDQQVEVMTFAE--DG--GGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNI--VIW 208 (356)
T ss_dssp TTCEEEEEEECT--TS--CEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEE--EEE
T ss_pred CCCcEEEEEECC--CC--ceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcE--EEE
Confidence 488899998733 11 233677789999999999995443 679999 999
No 145
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=48.02 E-value=13 Score=30.34 Aligned_cols=58 Identities=16% Similarity=0.110 Sum_probs=40.0
Q ss_pred cccceEEEeehhhhcCCC--CcccccccccccceeEEEeccCCCC---CC--------cceehhhhh--ccCCCC
Q psy14121 4 CDDGIIQMYNVDNIMSGD--NKVDILSKKHSGPVRALDFNKFQVV---AT--------NFKIRAHLW--RNLHHH 63 (118)
Q Consensus 4 lenG~I~lwdp~kIL~g~--~~~l~~~~KHtGpVraLdFNp~Q~N---gs--------~GEI~~fIW--nn~~~P 63 (118)
+.+++|.|||.+.--..+ -..+...+-|.+.+..+.|.|..++ ++ +..| .|| ++...+
T Consensus 390 ~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg~~l~v~~~~~~~~~~~~~v--~v~d~~~~~~~ 462 (543)
T 1nir_A 390 LGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKSSHLYVDTTFNPDARISQSV--AVFDLKNLDAK 462 (543)
T ss_dssp SSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTCCEEEECCTTCSSHHHHTCE--EEEETTCTTSC
T ss_pred CCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCCCcEEEecCCCCCcccCceE--EEEECCCCCCC
Confidence 468999999986511001 1223777789999999999998887 33 5689 899 544444
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=44.43 E-value=9.9 Score=27.35 Aligned_cols=48 Identities=10% Similarity=0.081 Sum_probs=34.0
Q ss_pred ccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 5 DDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 5 enG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
++|.|.+||.+ .+.-..+.....|.+.+..|.|.|.... ..++.| .||
T Consensus 61 ~~~~v~~~~~~---~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v--~v~ 113 (347)
T 3hfq_A 61 DEGGIAAWQID---GQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTA--EVM 113 (347)
T ss_dssp TEEEEEEEEEE---TTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEE--EEE
T ss_pred CCceEEEEEec---CCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEE--EEE
Confidence 36899999983 1211123445668889999999998775 356889 999
No 147
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=43.74 E-value=13 Score=29.34 Aligned_cols=43 Identities=12% Similarity=-0.016 Sum_probs=32.1
Q ss_pred ceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcc--eehhhhh
Q psy14121 7 GIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNF--KIRAHLW 57 (118)
Q Consensus 7 G~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~G--EI~~fIW 57 (118)
+.|.+||++. + .+.+...|.+.|..+.|.|.... ..+| .| |+|
T Consensus 175 ~~i~~~d~~~---g---~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i--~~~ 223 (582)
T 3o4h_A 175 VSLFTSNLSS---G---GLRVFDSGEGSFSSASISPGMKVTAGLETAREARL--VTV 223 (582)
T ss_dssp EEEEEEETTT---C---CCEEECCSSCEEEEEEECTTSCEEEEEECSSCEEE--EEE
T ss_pred eEEEEEcCCC---C---CceEeecCCCccccceECCCCCEEEEccCCCeeEE--EEE
Confidence 6788888642 2 23456789999999999998776 3455 78 999
No 148
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=41.85 E-value=21 Score=29.63 Aligned_cols=43 Identities=9% Similarity=0.117 Sum_probs=33.5
Q ss_pred ceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121 7 GIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW 57 (118)
Q Consensus 7 G~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW 57 (118)
|.|.|||.+. ..+.+...|.+.+....|+|.... ..++.| |||
T Consensus 92 ~~~~~~d~~~------~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i--~~~ 137 (740)
T 4a5s_A 92 ASYDIYDLNK------RQLITEERIPNNTQWVTWSPVGHKLAYVWNNDI--YVK 137 (740)
T ss_dssp EEEEEEETTT------TEECCSSCCCTTEEEEEECSSTTCEEEEETTEE--EEE
T ss_pred eEEEEEECCC------CcEEEcccCCCcceeeEECCCCCEEEEEECCeE--EEE
Confidence 6677888742 223456678899999999998887 778999 999
No 149
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=39.88 E-value=22 Score=28.61 Aligned_cols=23 Identities=4% Similarity=-0.015 Sum_probs=19.3
Q ss_pred cceeEEEeccCCCC---CCcceehhhhh
Q psy14121 33 GPVRALDFNKFQVV---ATNFKIRAHLW 57 (118)
Q Consensus 33 GpVraLdFNp~Q~N---gs~GEI~~fIW 57 (118)
..|.++.|+|.... +++++| +||
T Consensus 109 ~~v~~~~~SpDg~~l~~~~~~~i--~~~ 134 (741)
T 2ecf_A 109 TGIVDYQWSPDAQRLLFPLGGEL--YLY 134 (741)
T ss_dssp EESCCCEECTTSSEEEEEETTEE--EEE
T ss_pred cCcceeEECCCCCEEEEEeCCcE--EEE
Confidence 45899999998876 666999 999
No 150
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=38.97 E-value=22 Score=25.71 Aligned_cols=71 Identities=11% Similarity=-0.053 Sum_probs=38.2
Q ss_pred cceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC-----CCcceehhhhh-ccCC--CCCCCCCCCCCcccce
Q psy14121 6 DGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV-----ATNFKIRAHLW-RNLH--HHFRVPGKKTFNLILG 77 (118)
Q Consensus 6 nG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW-nn~~--~P~t~PG~ks~p~ei~ 77 (118)
++.|.+|+.+.- .+.-..+..... ...+++|.|+|.... ..++.| .|| -++. ..-. -+....-..+.
T Consensus 281 ~~~i~v~~~~~~-~g~~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v--~v~~~d~~~g~~~~-~~~~~~~~~p~ 355 (361)
T 3scy_A 281 ADGVAIFKVDET-NGTLTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVI--QIFERDQATGLLTD-IKKDIKVDKPV 355 (361)
T ss_dssp SCEEEEEEECTT-TCCEEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEE--EEEEECTTTCCEEE-CSCCEECSSEE
T ss_pred CCEEEEEEEcCC-CCcEEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCE--EEEEEECCCCcEee-cceeeeCCCCe
Confidence 678999986420 111111222222 457899999998775 356788 777 3332 2222 22222223567
Q ss_pred eeec
Q psy14121 78 RLGL 81 (118)
Q Consensus 78 ~l~~ 81 (118)
||.|
T Consensus 356 ~v~~ 359 (361)
T 3scy_A 356 CLKF 359 (361)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 7766
No 151
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=37.35 E-value=12 Score=32.49 Aligned_cols=48 Identities=10% Similarity=0.193 Sum_probs=33.5
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CC----------cceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----AT----------NFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs----------~GEI~~fIW 57 (118)
+..++.|.+||.+. ++ .......|.++|.++.|.|.... +. +++| +||
T Consensus 396 ~~~~~~v~~~d~~t---g~--~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i--~l~ 457 (1045)
T 1k32_A 396 ANDRFEIMTVDLET---GK--PTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAI--HVY 457 (1045)
T ss_dssp EETTSEEEEEETTT---CC--EEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEE--EEE
T ss_pred ECCCCeEEEEECCC---Cc--eEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeE--EEE
Confidence 34678899999842 21 11333469999999999998775 22 2589 999
No 152
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=35.83 E-value=23 Score=28.90 Aligned_cols=47 Identities=15% Similarity=0.100 Sum_probs=32.0
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC----CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV----ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N----gs~GEI~~fIW 57 (118)
+..+|+|.+||++.. +.+.....+.. |.++.|+|...- ..++.| .+|
T Consensus 155 ~~~d~~V~v~D~~t~-----~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V--~v~ 205 (543)
T 1nir_A 155 LRDAGQIALVDGDSK-----KIVKVIDTGYA-VHISRMSASGRYLLVIGRDARI--DMI 205 (543)
T ss_dssp EGGGTEEEEEETTTC-----CEEEEEECSTT-EEEEEECTTSCEEEEEETTSEE--EEE
T ss_pred EcCCCeEEEEECCCc-----eEEEEEecCcc-cceEEECCCCCEEEEECCCCeE--EEE
Confidence 457899999998531 12233332333 889999997776 556889 898
No 153
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=32.49 E-value=23 Score=28.56 Aligned_cols=44 Identities=16% Similarity=0.207 Sum_probs=30.9
Q ss_pred cceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC---CCcceehhhhh
Q psy14121 6 DGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV---ATNFKIRAHLW 57 (118)
Q Consensus 6 nG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N---gs~GEI~~fIW 57 (118)
++.|.+||.+. + ......+-++.|..+.|+|.... +.+++| |||
T Consensus 89 ~~~i~~~d~~~---g---~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i--~~~ 135 (719)
T 1z68_A 89 TATYYIYDLSN---G---EFVRGNELPRPIQYLCWSPVGSKLAYVYQNNI--YLK 135 (719)
T ss_dssp EEEEEEEETTT---T---EECCSSCCCSSBCCEEECSSTTCEEEEETTEE--EEE
T ss_pred ceEEEEEECCC---C---ccccceecCcccccceECCCCCEEEEEECCeE--EEE
Confidence 68999999742 1 11001222467999999998877 678899 999
No 154
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=31.68 E-value=30 Score=25.55 Aligned_cols=49 Identities=8% Similarity=-0.053 Sum_probs=30.9
Q ss_pred ccceEEEeehhhhcCCCCccccccc--ccccceeEEEeccCCCC-----CCcceehhhhh
Q psy14121 5 DDGIIQMYNVDNIMSGDNKVDILSK--KHSGPVRALDFNKFQVV-----ATNFKIRAHLW 57 (118)
Q Consensus 5 enG~I~lwdp~kIL~g~~~~l~~~~--KHtGpVraLdFNp~Q~N-----gs~GEI~~fIW 57 (118)
.++.|.+||.+. .|.-..+.... .|...++.+.|.|.... ..+++| .||
T Consensus 165 ~~~~v~~~~~~~--~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v--~v~ 220 (365)
T 1jof_A 165 TANKLWTHRKLA--SGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRI--CEY 220 (365)
T ss_dssp TTTEEEEEEECT--TSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEE--EEE
T ss_pred CCCEEEEEEECC--CCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeE--EEE
Confidence 457899998863 23211122222 35567999999998766 235788 777
No 155
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=30.81 E-value=21 Score=28.94 Aligned_cols=44 Identities=9% Similarity=0.083 Sum_probs=33.2
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--CCcceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--ATNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--gs~GEI~~fIW 57 (118)
+..||+|.+||-.. + +..+|...|++++++|...- ..+|.| .||
T Consensus 142 ~~~dG~L~v~dl~~---~------~~~~~~~~Vs~v~WSpkG~~vg~~dg~i--~~~ 187 (388)
T 1xip_A 142 LNSVNDLSALDLRT---K------STKQLAQNVTSFDVTNSQLAVLLKDRSF--QSF 187 (388)
T ss_dssp EETTSEEEEEETTT---C------CEEEEEESEEEEEECSSEEEEEETTSCE--EEE
T ss_pred EECCCCEEEEEccC---C------ccccccCCceEEEEcCCceEEEEcCCcE--EEE
Confidence 46899999998742 1 11236679999999999855 778888 777
No 156
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=27.92 E-value=35 Score=24.93 Aligned_cols=36 Identities=19% Similarity=0.277 Sum_probs=23.3
Q ss_pred cccceEEEeehhhhcCCCCcccccccccccceeEEEecc
Q psy14121 4 CDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNK 42 (118)
Q Consensus 4 lenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp 42 (118)
..++.|.+||++ .|.--.......|.+.+.++.|.|
T Consensus 215 ~~~~~I~~~~~~---~G~~~~~~~~~~~~~~~~~~~~~p 250 (329)
T 3fvz_A 215 RENGRIQCFKTD---TKEFVREIKHASFGRNVFAISYIP 250 (329)
T ss_dssp TTTTEEEEEETT---TCCEEEEECCTTTTTCEEEEEEET
T ss_pred CCCCEEEEEECC---CCcEEEEEeccccCCCcceeeecC
Confidence 467889999985 221111133345677888999998
No 157
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=26.84 E-value=19 Score=29.11 Aligned_cols=46 Identities=11% Similarity=0.231 Sum_probs=30.1
Q ss_pred ccceEEEeehhhhcCCCCccccccccccc---ceeEEEeccCCCC---CC----------cceehhhhh
Q psy14121 5 DDGIIQMYNVDNIMSGDNKVDILSKKHSG---PVRALDFNKFQVV---AT----------NFKIRAHLW 57 (118)
Q Consensus 5 enG~I~lwdp~kIL~g~~~~l~~~~KHtG---pVraLdFNp~Q~N---gs----------~GEI~~fIW 57 (118)
+||.|.+||++. +... .....|+. .|.++.|+|.... ++ ++.| +||
T Consensus 34 ~d~~i~~~~~~~---g~~~--~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i--~~~ 95 (719)
T 1z68_A 34 ADNNIVLYNIET---GQSY--TILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATY--YIY 95 (719)
T ss_dssp TTSCEEEEESSS---CCEE--EEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEE--EEE
T ss_pred CCCCEEEEEcCC---CcEE--EEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEE--EEE
Confidence 588999999742 2111 12222333 4999999998776 33 5899 999
No 158
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=21.90 E-value=1e+02 Score=21.57 Aligned_cols=46 Identities=9% Similarity=-0.096 Sum_probs=29.8
Q ss_pred ccccceEEEeehhhhcCCCCcccccccccccceeEEEeccCCCC--C--Ccceehhhhh
Q psy14121 3 GCDDGIIQMYNVDNIMSGDNKVDILSKKHSGPVRALDFNKFQVV--A--TNFKIRAHLW 57 (118)
Q Consensus 3 GlenG~I~lwdp~kIL~g~~~~l~~~~KHtGpVraLdFNp~Q~N--g--s~GEI~~fIW 57 (118)
+..+|.|..||++. . ......+.+.+.+|.|.|...- + .++.| ++|
T Consensus 46 ~~~~~~i~~~~~~~----~---~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i--~~~ 95 (296)
T 3e5z_A 46 DVRQNRTWAWSDDG----Q---LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRL--ERQ 95 (296)
T ss_dssp EGGGTEEEEEETTS----C---EEEEESSCSSEEEEEECTTCCEEEEETTTTEE--EEE
T ss_pred eCCCCEEEEEECCC----C---eEEEECCCCCcceeeECCCCcEEEEecCCCeE--EEE
Confidence 45677888888752 1 2333456788999999885433 2 24678 888
Done!