Query psy14122
Match_columns 168
No_of_seqs 183 out of 1228
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 20:08:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy14122.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/14122hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hx3_A Retinaldehyde-binding p 100.0 3.4E-33 1.2E-37 229.7 10.4 144 24-168 28-264 (316)
2 1r5l_A Alpha-TTP, protein (alp 99.9 2.7E-28 9.3E-33 194.2 8.9 133 36-168 43-205 (262)
3 1aua_A Phosphatidylinositol tr 99.9 5.2E-26 1.8E-30 184.6 8.0 132 36-168 62-236 (296)
4 1olm_A SEC14-like protein 2; l 99.9 3.6E-26 1.2E-30 192.8 6.9 133 36-168 45-216 (403)
5 3q8g_A CRAL-TRIO domain-contai 99.9 2.9E-24 1E-28 176.8 6.3 133 35-168 70-251 (320)
6 3pg7_A Neurofibromin; SEC lipi 97.4 0.00018 6.3E-09 56.9 5.3 90 67-164 31-121 (256)
7 3peg_A Neurofibromin; SEC14 do 97.3 0.00014 4.7E-09 58.7 3.9 91 67-165 50-141 (290)
8 2q3l_A Uncharacterized protein 64.2 22 0.00076 24.2 6.3 84 73-166 29-113 (126)
9 2oo3_A Protein involved in cat 52.1 9.9 0.00034 30.2 3.0 33 134-166 233-265 (283)
10 3mvn_A UDP-N-acetylmuramate:L- 35.6 61 0.0021 22.7 4.9 40 98-148 34-73 (163)
11 2ka5_A Putative anti-sigma fac 35.4 90 0.0031 20.6 5.6 51 101-157 53-103 (125)
12 3oqv_A ALBC; rossman fold, cyc 33.5 1.6E+02 0.0055 22.7 7.2 53 38-90 130-183 (247)
13 3t6o_A Sulfate transporter/ant 33.0 86 0.0029 20.4 5.1 52 100-156 48-99 (121)
14 1sbo_A Putative anti-sigma fac 32.6 92 0.0031 19.4 5.5 50 102-157 46-95 (110)
15 2ook_A Hypothetical protein; s 32.2 15 0.00051 25.1 1.0 83 73-165 29-112 (127)
16 3ct6_A PTS-dependent dihydroxy 30.5 59 0.002 22.3 4.0 41 99-155 59-99 (131)
17 3llo_A Prestin; STAS domain, c 28.7 1.3E+02 0.0045 20.0 5.7 50 101-156 65-114 (143)
18 3uws_A Hypothetical protein; c 22.7 1.8E+02 0.0063 19.7 5.3 28 118-145 84-111 (126)
19 4dgh_A Sulfate permease family 21.9 1.7E+02 0.006 19.1 5.8 50 101-156 50-99 (130)
20 3ny7_A YCHM protein, sulfate t 21.3 1.8E+02 0.006 18.9 5.4 49 101-156 47-95 (118)
21 4hyl_A Stage II sporulation pr 21.2 1.1E+02 0.0036 19.6 3.7 50 102-157 44-93 (117)
No 1
>3hx3_A Retinaldehyde-binding protein 1; lipid transfer protein, 11-CIS-retinal, bothnia dystrophy, acetylation, cytoplasm, disease mutation; HET: RET; 1.69A {Homo sapiens} PDB: 3hy5_A*
Probab=100.00 E-value=3.4e-33 Score=229.65 Aligned_cols=144 Identities=27% Similarity=0.520 Sum_probs=112.7
Q ss_pred CCC-ceeeccCCCCHHHHHHHHHHhcCCHHHHHHHHHHHHHHH------------------c------------------
Q psy14122 24 ADP-RFRIEDGELSEESKKVAEVELRETPERVQESLRQLKQML------------------K------------------ 66 (168)
Q Consensus 24 ~~~-~~~~~~~~l~~~~~~~A~~~L~E~~~~R~~~~~~lr~~i------------------~------------------ 66 (168)
++| +|+... +|||+.+++|++||+|+++.|+++|++||+|| .
T Consensus 28 ~~~~~~~~~~-~l~~~~~~~a~~eL~E~~~~~~~~l~~LR~wi~~~p~l~~~l~~~~~~~~~~~dD~~LlRFLRarkfdv 106 (316)
T 3hx3_A 28 DHGPVFGPCS-QLPRHTLQKAKDELNEREETREEAVRELQEMVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKFNV 106 (316)
T ss_dssp -----------------------------CHHHHHHHHHHHHHHHHHTTTCHHHHHHHHHTTTCCHHHHHHHHHHTTTCH
T ss_pred cCCccccCCC-CCCHHHHHHHHHHhCCChHHHHHHHHHHHHHHHhCCCccccccccccccCCCCCHHHHHHHHHHcCCCH
Confidence 555 677666 89999999999999999999999999999998 1
Q ss_pred --------------------------------------------------------CCCCCCCCCHHHHHHHHHHHHHHH
Q psy14122 67 --------------------------------------------------------GPWDPKVLSTDQILRVLYLIHLAA 90 (168)
Q Consensus 67 --------------------------------------------------------g~~dp~~~s~~~~~r~~~~~~E~~ 90 (168)
|++||++++.++++|+.++++|.+
T Consensus 107 ~kA~~~L~~~l~wR~~~~~~~~~~~~~~i~~~l~~g~~~~l~g~Dk~GrpVii~r~g~~d~~~~~~~~~~r~~~~~lE~~ 186 (316)
T 3hx3_A 107 GRAYELLRGYVNFRLQYPELFDSLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQSQEITFDEILQAYCFILEKL 186 (316)
T ss_dssp HHHHHHHHHHHHHHHHCGGGTTTCCHHHHHHHHHTTSSEECSSCCTTSCEEEEEECTTCCTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCchhhcCCCHHHHHHHHHcCCccccCCCCCCCCEEEEEecccCCCCCCCHHHHHHHHHHHHHHH
Confidence 899999999999999999999999
Q ss_pred HhcCCCeeccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHHHHhhhhcHHhhcC
Q psy14122 91 IREPESQVRGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWRLFKPFIREKLQKR 168 (168)
Q Consensus 91 ~~~~~~qi~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~ivkpfL~~k~~~R 168 (168)
+.++..+++|+++|+|++|+|++|+++++++.+|+++.++|++||+|++++||||+|++|+++|+++||||+++|++|
T Consensus 187 l~~~~~~v~g~v~IiD~~g~sl~~~~~~~~~~~k~~~~~lq~~YPerL~~i~iiN~P~~f~~i~~ivkpfl~~kt~~K 264 (316)
T 3hx3_A 187 LENEETQINGFCIIENFKGFTMQQAASLRTSDLRKMVDMLQDSFPAWFKAIHFIHQPWYFTTTYNVVKPFLKSKLLER 264 (316)
T ss_dssp TTSHHHHHHCEEEEEECTTCCHHHHHHCCHHHHHHHHHHHHTTSTTTEEEEEEESCCTTHHHHHHHHGGGCCHHHHTT
T ss_pred HhcccCCcceEEEEEECCCCCHHHhccCChHHHHHHHHHHHHhhhhhhceEEEEeCCHHHHHHHHHHHHhCCHHhhhh
Confidence 987777899999999999999999988999999999999999999999999999999999999999999999999986
No 2
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=99.95 E-value=2.7e-28 Score=194.20 Aligned_cols=133 Identities=29% Similarity=0.547 Sum_probs=119.3
Q ss_pred CHHHHHHHHHHhcCCHHHHHHHHH--------HHHHHHc----------------------CCCCCCCCCHHHHHHHHHH
Q psy14122 36 SEESKKVAEVELRETPERVQESLR--------QLKQMLK----------------------GPWDPKVLSTDQILRVLYL 85 (168)
Q Consensus 36 ~~~~~~~A~~~L~E~~~~R~~~~~--------~lr~~i~----------------------g~~dp~~~s~~~~~r~~~~ 85 (168)
..+++++|.++|.++.+||++.-+ ++.+.+. |++||+.++..+++|+.++
T Consensus 43 ~k~dv~~A~~~l~~~l~wR~~~~~i~~~~~~~~~~~~~~~g~~~~l~g~D~~GrpV~i~~~~~~d~~~~~~~~~~r~~~~ 122 (262)
T 1r5l_A 43 RDFDLDLAWRLLKNYYKWRAECPEISADLHPRSIIGLLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLI 122 (262)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHCHHHHSCCCGGGTHHHHHTTCEEECSSCCTTCCEEEEEEGGGCCTTTSCHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHhChHhhhcCChHHHHHHHHcCCccCCCCcCCCCCEEEEEeccccCcccCCHHHHHHHHHH
Confidence 557899999999999999998611 1111111 7799999999999999999
Q ss_pred HHHHHHhcCCCeeccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHHHHhhhhcHHh
Q psy14122 86 IHLAAIREPESQVRGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWRLFKPFIREKL 165 (168)
Q Consensus 86 ~~E~~~~~~~~qi~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~ivkpfL~~k~ 165 (168)
++|.++.+++.++.|+++|+|++|+|++|+++++++.++.++.++|++||+|++++||||+|++|+++|+++||||+++|
T Consensus 123 ~~E~~~~~~~~~~~g~~~I~D~~g~s~~~~~~~~~~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vkpfl~~~t 202 (262)
T 1r5l_A 123 TSELIVQEVETQRNGIKAIFDLEGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKI 202 (262)
T ss_dssp HHHHHTTSHHHHHHCEEEEEECTTCCHHHHHHCCHHHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHGGGSCHHH
T ss_pred HHHHHHhChhhcccceEEEEECCCCCHHHHhccCHHHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHHHhcCHHH
Confidence 99999888777889999999999999999988899999999999999999999999999999999999999999999999
Q ss_pred hcC
Q psy14122 166 QKR 168 (168)
Q Consensus 166 ~~R 168 (168)
++|
T Consensus 203 ~~K 205 (262)
T 1r5l_A 203 KER 205 (262)
T ss_dssp HTT
T ss_pred Hhh
Confidence 986
No 3
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding protein, peripheral golgi membrane protein, phospholipid exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae} SCOP: a.5.3.1 c.13.1.1
Probab=99.92 E-value=5.2e-26 Score=184.57 Aligned_cols=132 Identities=17% Similarity=0.288 Sum_probs=111.6
Q ss_pred CHHHHHHHHHHhcCCHHHHHHH-HHHH-HHH-------Hc----------------------CCCCCCC----CCHHHHH
Q psy14122 36 SEESKKVAEVELRETPERVQES-LRQL-KQM-------LK----------------------GPWDPKV----LSTDQIL 80 (168)
Q Consensus 36 ~~~~~~~A~~~L~E~~~~R~~~-~~~l-r~~-------i~----------------------g~~dp~~----~s~~~~~ 80 (168)
..+++++|.++|.++.+||++. ++.+ .++ +. |++|+++ .+.++++
T Consensus 62 rkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~Dk~GrpV~i~~~g~~d~~~~~~~~~~~~~~ 141 (296)
T 1aua_A 62 RKFDVQLAKEMFENCEKWRKDYGTDTILQDFHYDEKPLIAKFYPQYYHKTDKDGRPVYFEELGAVNLHEMNKVTSEERML 141 (296)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHTGGGHHHHCCCTTHHHHGGGSCCEEEEECTTSCEEEEECGGGCCHHHHTTTCCHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHcCcchhhhccccCcHHHHHHhCCceecccCCCCCEEEEEeeccCChHHhhccCCHHHHH
Confidence 4578999999999999999987 1111 111 11 6677753 6899999
Q ss_pred HHHHHHHHHHHhc--------CCCeeccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHH
Q psy14122 81 RVLYLIHLAAIRE--------PESQVRGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNL 152 (168)
Q Consensus 81 r~~~~~~E~~~~~--------~~~qi~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~ 152 (168)
++.++.+|.++.. .+.+++|+++|+|++|+|++|+.++ ++.+|.++.++|++||+|++++||||+|++|++
T Consensus 142 ~~~~~~~E~~~~~~~~~~s~~~g~~v~~~~~I~D~~g~s~~~~~~~-~~~~k~~~~~~q~~YPerl~~i~iiN~P~~f~~ 220 (296)
T 1aua_A 142 KNLVWEYESVVQYRLPACSRAAGHLVETSCTIMDLKGISISSAYSV-MSYVREASYISQNYYPERMGKFYIINAPFGFST 220 (296)
T ss_dssp HHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCHHHHHHH-HHHHHHHHHHHHHHSTTCEEEEEEESCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCceeEEEEEECCCCCHHHHHHH-HHHHHHHHHHHHHhHHHhhCeEEEECchHHHHH
Confidence 9999999987753 2335789999999999999998766 889999999999999999999999999999999
Q ss_pred HHHHHhhhhcHHhhcC
Q psy14122 153 VWRLFKPFIREKLQKR 168 (168)
Q Consensus 153 i~~ivkpfL~~k~~~R 168 (168)
+|+++||||+++|++|
T Consensus 221 ~~~iikpfl~~~t~~K 236 (296)
T 1aua_A 221 AFRLFKPFLDPVTVSK 236 (296)
T ss_dssp HHHHHGGGSCHHHHTT
T ss_pred HHHHHHhhcCHhhcce
Confidence 9999999999999986
No 4
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=99.92 E-value=3.6e-26 Score=192.84 Aligned_cols=133 Identities=25% Similarity=0.369 Sum_probs=116.3
Q ss_pred CHHHHHHHHHHhcCCHHHHHHH-HH---------HHHHHHc------------------CCCCCC----CCCHHHHHHHH
Q psy14122 36 SEESKKVAEVELRETPERVQES-LR---------QLKQMLK------------------GPWDPK----VLSTDQILRVL 83 (168)
Q Consensus 36 ~~~~~~~A~~~L~E~~~~R~~~-~~---------~lr~~i~------------------g~~dp~----~~s~~~~~r~~ 83 (168)
..+++++|.++|.++.+||++. ++ .++.... |++|++ .++.++++|+.
T Consensus 45 rkfdv~~A~~~l~~~l~wR~~~~~~~i~~~~~~~~~~~~~~~~~~g~Dk~GrpV~~~~~g~~d~~~l~~~~~~~~~~r~~ 124 (403)
T 1olm_A 45 RSFDLQKSEAMLRKHVEFRKQKDIDNIISWQPPEVIQQYLSGGMCGYDLDGCPVWYDIIGPLDAKGLLFSASKQDLLRTK 124 (403)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHTTGGGGGGSCCCHHHHHHCCBEEEEECTTSCEEEEEECTTCCHHHHHTTSCHHHHHHHH
T ss_pred cCCCHHHHHHHHHHHHHHHHHcCCCcccccCCHHHHHHhCCceeeccCCCcCEEEEEecCCCChHHhhccCCHHHHHHHH
Confidence 5578999999999999999975 11 2333322 888987 58999999999
Q ss_pred HHHHHHHHhcCCC-------eeccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHHH
Q psy14122 84 YLIHLAAIREPES-------QVRGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWRL 156 (168)
Q Consensus 84 ~~~~E~~~~~~~~-------qi~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~i 156 (168)
++++|.++.+... .+.|+++|+|++|+|++|+++..++.++.++.++|++||+|++++||||+|++|+++|++
T Consensus 125 ~~~~E~~~~~~~~~s~~~g~~v~~~~~I~D~~g~sl~~~~~~~~~~~k~~~~~lq~~YPerl~~i~iiN~P~~f~~i~~~ 204 (403)
T 1olm_A 125 MRECELLLQECAHQTTKLGRKVETITIIYDCEGLGLKHLWKPAVEAYGEFLCMFEENYPETLKRLFVVKAPKLFPVAYNL 204 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHTSCCCCEEEEEECTTCCGGGGCHHHHHHHHHHHHHHHHHSTTCEEEEEEESCCTTHHHHHHH
T ss_pred HHHHHHHHHHHHhhHHhhCCcccceEEEEECCCCCHHHHhhHHHHHHHHHHHHHHhhCcHhhCeEEEEeCCHHHHHHHHH
Confidence 9999999876443 379999999999999999877678889999999999999999999999999999999999
Q ss_pred HhhhhcHHhhcC
Q psy14122 157 FKPFIREKLQKR 168 (168)
Q Consensus 157 vkpfL~~k~~~R 168 (168)
+||||+++|++|
T Consensus 205 ikpfl~~~t~~K 216 (403)
T 1olm_A 205 IKPFLSEDTRKK 216 (403)
T ss_dssp HGGGSCHHHHHT
T ss_pred HHhhcCHhhhce
Confidence 999999999986
No 5
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif, signaling protein, directed evoluti SEC14, phospholipid transporter, lipid; HET: PEE; 1.80A {Saccharomyces cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Probab=99.90 E-value=2.9e-24 Score=176.77 Aligned_cols=133 Identities=19% Similarity=0.231 Sum_probs=110.5
Q ss_pred CCHHHHHHHHHHhcCCHHHHHHHH-HHH-HH--------------HHc---------------------CCCCCCC----
Q psy14122 35 LSEESKKVAEVELRETPERVQESL-RQL-KQ--------------MLK---------------------GPWDPKV---- 73 (168)
Q Consensus 35 l~~~~~~~A~~~L~E~~~~R~~~~-~~l-r~--------------~i~---------------------g~~dp~~---- 73 (168)
...+++++|.++|.++.+||++.- +.+ .+ ... |++|+++
T Consensus 70 Arkfdv~kA~~mL~~~l~WRk~~~vd~i~~~~~~~~~~~~~e~~~~~~~~~~~~~g~Dk~GRpV~i~r~g~~d~~~l~~~ 149 (320)
T 3q8g_A 70 ARKFDINASVEMFVETERWREEYGANTIIEDYENNKEAEDKERIKLAKMYPQYYHHVDKDGRPLYFAELGGINLKKMYKI 149 (320)
T ss_dssp HTTTCHHHHHHHHHHHHHHHHHHTGGGHHHHHHHTHHHHHHHHHHHHTTSCEEEEEECTTCCEEEEEECTTCCHHHHHHH
T ss_pred HcCCCHHHHHHHHHHHHHHHHHcCccccccccccccccchhHHHHHHHhCCceecCCCCCcCEEEEEeccccCHHHhhcc
Confidence 355789999999999999999861 111 11 111 7788875
Q ss_pred CCHHHHHHHHHHHHHHHHhcC--------CCeeccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEe
Q psy14122 74 LSTDQILRVLYLIHLAAIREP--------ESQVRGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVK 145 (168)
Q Consensus 74 ~s~~~~~r~~~~~~E~~~~~~--------~~qi~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN 145 (168)
.+.++++|+.++.+|.++... +..+.+.++|+|++|+|++|+.++ ++.+|.++.++|++||+|++++||||
T Consensus 150 ~~~~~~lr~lv~~~E~~~~~~l~~~s~~~G~~ve~~~~IiD~~g~sl~~~~~~-~~~~k~~~~~lq~~YPerl~~i~iiN 228 (320)
T 3q8g_A 150 TTEKQMLRNLVKEYELFATYRVPACSRRAGYLIETSCTVLDLKGISLSNAYHV-LSYIKDVADISQNYYPERMGKFYIIH 228 (320)
T ss_dssp CCHHHHHHHHHHHHHHHHHTHHHHHHHHHTSCCCCEEEEEECTTCCHHHHHHT-HHHHHHHHHHHHHHSTTCEEEEEEES
T ss_pred CCHHHHHHHHHHHHHHHHHHhhhHHHHhcCCCcceeEEEEECCCCCHHHHHHH-HHHHHHHHHHHHhhCchhhceEEEEC
Confidence 488999999999999887431 122567899999999999998765 78899999999999999999999999
Q ss_pred CChhHHHHHHHHhhhhcHHhhcC
Q psy14122 146 EPIYFNLVWRLFKPFIREKLQKR 168 (168)
Q Consensus 146 ~P~~f~~i~~ivkpfL~~k~~~R 168 (168)
+|++|+++|+++||||+++|++|
T Consensus 229 ~P~~f~~~~~~ikpfl~~~t~~K 251 (320)
T 3q8g_A 229 SPFGFSTMFKMVKPFLDPVTVSK 251 (320)
T ss_dssp CCTTHHHHHTTTGGGSCHHHHHT
T ss_pred CCHHHHHHHHHHHHhCCHHHhhh
Confidence 99999999999999999999986
No 6
>3pg7_A Neurofibromin; SEC lipid binding domain, PH domain, lipid binding protein; HET: PTY; 2.19A {Homo sapiens} PDB: 2e2x_A* 3p7z_A* 2d4q_A*
Probab=97.40 E-value=0.00018 Score=56.94 Aligned_cols=90 Identities=13% Similarity=0.082 Sum_probs=68.9
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeeccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeC
Q psy14122 67 GPWDPKVLSTDQILRVLYLIHLAAIREPESQVRGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKE 146 (168)
Q Consensus 67 g~~dp~~~s~~~~~r~~~~~~E~~~~~~~~qi~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~ 146 (168)
++++++..+.+.++.+.+..+|.... ....+|+|++|++..+ ..+.+.++++.+++...|...++++||+|+
T Consensus 31 ~~l~~~~~D~e~Ll~~vl~tl~~~~~------~~y~lV~d~T~~~~~n--~p~~~wl~~~~~llp~~~~kNlk~~Yivnp 102 (256)
T 3pg7_A 31 RRFKTGQINGDLLIYHVLLTLKPYYA------KPYEIVVDLTHTGPSN--RFKTDFLSKWFVVFPGFAYDNVSAVYIYNC 102 (256)
T ss_dssp GGCCBTTBCHHHHHHHHHHHHTTTTT------SCEEEEEECTTCCGGG--CCCHHHHHHTTTSSCHHHHHTEEEEEEESC
T ss_pred ecCCCCCCCHHHHHHHHHHHHHHhcC------CCeEEEEECCCCCccc--CCcHHHHHHHHHHcCHHHHhcccEEEEECC
Confidence 44566667777777766666654332 4688999999999875 446788999999999999999999999999
Q ss_pred ChhHHHHHHH-HhhhhcHH
Q psy14122 147 PIYFNLVWRL-FKPFIREK 164 (168)
Q Consensus 147 P~~f~~i~~i-vkpfL~~k 164 (168)
+++|...+.. .++|.+.+
T Consensus 103 t~~~k~~~~~~~~~~~~~k 121 (256)
T 3pg7_A 103 NSWVREYTKYHERLLTGLK 121 (256)
T ss_dssp CHHHHHHHHHTHHHHTTTT
T ss_pred CHHHHHHHHHHhccccccc
Confidence 9999976655 45555434
No 7
>3peg_A Neurofibromin; SEC14 domain, pleckstrin homology domain, PH domain, phosphatidylethanolamin binding, lipid binding, lipid bindi protein; HET: PEV; 2.52A {Homo sapiens}
Probab=97.34 E-value=0.00014 Score=58.75 Aligned_cols=91 Identities=13% Similarity=0.042 Sum_probs=70.4
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHhcCCCeeccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeC
Q psy14122 67 GPWDPKVLSTDQILRVLYLIHLAAIREPESQVRGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKE 146 (168)
Q Consensus 67 g~~dp~~~s~~~~~r~~~~~~E~~~~~~~~qi~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~ 146 (168)
++++....+.+.++-+.+..++.... ....+|+|++|++..+ ..+.+.++++..++...|+..++++|++|+
T Consensus 50 ~~~~~~~~D~e~Lly~il~tl~~~~~------~~y~lV~D~T~~~~~n--~p~~~~l~~~~~llp~~~~kNl~~~Yi~np 121 (290)
T 3peg_A 50 RRFKTGQINGDLLIYHVLLTLKPYYA------KPYEIVVDLTHTGPSN--RFKTDFLSKWFVVFPGFAYDNVSAVYIYNC 121 (290)
T ss_dssp GGCCBTTBCHHHHHHHHHHHHTTTTT------SCEEEEEECTTCCGGG--CCCHHHHGGGGTSSCHHHHHTEEEEEEESC
T ss_pred ecCCccCCCHHHHHHHHHHHHHHhcC------CCeEEEEEcCCCCccC--CChHHHHHHHHHHCCHHHHhhccEEEEECC
Confidence 56676777877776666666554331 4688999999999875 457789999999999999999999999999
Q ss_pred ChhHHHHH-HHHhhhhcHHh
Q psy14122 147 PIYFNLVW-RLFKPFIREKL 165 (168)
Q Consensus 147 P~~f~~i~-~ivkpfL~~k~ 165 (168)
|.+|...+ ...++|.+.+.
T Consensus 122 ~~~f~~~~k~~~~~~~~~k~ 141 (290)
T 3peg_A 122 NSWVREYTKYHERLLTGLKG 141 (290)
T ss_dssp CHHHHHHHHHTTTTGGGGTT
T ss_pred CHHHHHHHHHHHhhhhhhhc
Confidence 99998755 45566665443
No 8
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2
Probab=64.18 E-value=22 Score=24.16 Aligned_cols=84 Identities=15% Similarity=0.145 Sum_probs=54.3
Q ss_pred CCCHHHHHHHHHHHHHHHHhcCCC-eeccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHH
Q psy14122 73 VLSTDQILRVLYLIHLAAIREPES-QVRGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFN 151 (168)
Q Consensus 73 ~~s~~~~~r~~~~~~E~~~~~~~~-qi~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~ 151 (168)
+.|.+|+-. ..=.+|..+...+. .+.-++.+-|++|++++-++ .-+.+--.+ -..+.++-||-.+.+..
T Consensus 29 ~lt~~d~~~-l~~~l~~~l~~~~~~~i~ll~~~~~f~G~~~~a~~--------~d~k~~~~h-~~~~~RiAvV~d~~W~~ 98 (126)
T 2q3l_A 29 KLTHEDYEQ-MTPLLESALAGIKTPEIVALIDITELDGLSLHAAW--------DDLKLGLKH-GKEFKRVAIIGQGELQE 98 (126)
T ss_dssp EECHHHHHH-HHHHHHHHTTTCCSSCEEEEEEEEEEEEECHHHHH--------HHHHHHHHH-GGGEEEEEEECCSHHHH
T ss_pred eECHHHHHH-HHHHHHHHHHhCCCceEEEEEEecCCCCCCHHHHH--------HHHHhhhhH-HhcCCEEEEEcChHHHH
Confidence 467777766 56666766654332 14545555566666655332 222221222 36789999999999999
Q ss_pred HHHHHHhhhhcHHhh
Q psy14122 152 LVWRLFKPFIREKLQ 166 (168)
Q Consensus 152 ~i~~ivkpfL~~k~~ 166 (168)
.+.++..+|++..+|
T Consensus 99 ~~~~~~~~~~~~evk 113 (126)
T 2q3l_A 99 WATRVANWFTPGEFK 113 (126)
T ss_dssp HHHHHHHHHCSSEEE
T ss_pred HHHHHHhhccCCcee
Confidence 999999999876543
No 9
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=52.07 E-value=9.9 Score=30.15 Aligned_cols=33 Identities=12% Similarity=0.104 Sum_probs=27.0
Q ss_pred cceeeeeEEEEeCChhHHHHHHHHhhhhcHHhh
Q psy14122 134 LPLRVKEVHIVKEPIYFNLVWRLFKPFIREKLQ 166 (168)
Q Consensus 134 yP~Rl~~i~iIN~P~~f~~i~~ivkpfL~~k~~ 166 (168)
..+.=.++.|||+||-+.-...-+-|+|.+.+.
T Consensus 233 ~gm~gsGm~viNpP~~l~~~~~~~l~~l~~~l~ 265 (283)
T 2oo3_A 233 EGMTGCGLWIINPPYTFPSEIKLVLETLTTYFN 265 (283)
T ss_dssp CSCCEEEEEEESCCTTHHHHHHHHHHHHHHHSS
T ss_pred CCcCceeEEEECCchhHHHHHHHHHHHHHHHhC
Confidence 445556899999999999999999999877653
No 10
>3mvn_A UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamayl-M diaminopimelate ligase; structural genomics, MCSG, PSI-2; 1.90A {Haemophilus ducreyi}
Probab=35.57 E-value=61 Score=22.67 Aligned_cols=40 Identities=20% Similarity=0.208 Sum_probs=30.0
Q ss_pred eccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCCh
Q psy14122 98 VRGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPI 148 (168)
Q Consensus 98 i~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~ 148 (168)
..|.++|.|+.. +|.-++..+..+.+.||. +++.+|-.|.
T Consensus 34 ~~g~~vi~DyaH---------nP~si~a~l~al~~~~~~--~riivvf~~g 73 (163)
T 3mvn_A 34 VNNITVYDDFAH---------HPTAITATIDALRAKVGQ--QRILAVLEPR 73 (163)
T ss_dssp ETTEEEEEECCC---------SHHHHHHHHHHHHHHHTT--SCEEEEECCC
T ss_pred CCCcEEEEcCCC---------CHHHHHHHHHHHHHhcCC--CcEEEEECCC
Confidence 357899999533 688899999999888886 4666665653
No 11
>2ka5_A Putative anti-sigma factor antagonist TM_1081; termotoga marithima, phosphoprotein, structural GENO PSI-2, protein structure initiative; NMR {Thermotoga maritima} PDB: 3f43_A*
Probab=35.42 E-value=90 Score=20.55 Aligned_cols=51 Identities=10% Similarity=-0.011 Sum_probs=34.5
Q ss_pred EEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHHHH
Q psy14122 101 GVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWRLF 157 (168)
Q Consensus 101 ~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~iv 157 (168)
-.+|+|+++++.= +.+.+..+..+.+.+ -.+=..+.++|++.-..-++.+.
T Consensus 53 ~~vvlDls~V~~i-----DSsGl~~L~~~~~~~-~~~g~~l~l~~~~~~v~~~l~~~ 103 (125)
T 2ka5_A 53 NKIFLVLSDVESI-----DSFSLGVIVNILKSI-SSSGGFFALVSPNEKVERVLSLT 103 (125)
T ss_dssp CEEEEECTTCSCC-----CHHHHHHHHHHHHHH-HHHTCEEEEECCCHHHHHHHHHT
T ss_pred CEEEEECCCCCEE-----cHHHHHHHHHHHHHH-HHcCCEEEEEeCCHHHHHHHHHc
Confidence 3589999998764 555555555555443 22336789999998877777654
No 12
>3oqv_A ALBC; rossman fold, cyclodipeptide synthase, aminoacyl-tRNA, prote binding; 1.90A {Streptomyces noursei}
Probab=33.53 E-value=1.6e+02 Score=22.68 Aligned_cols=53 Identities=9% Similarity=0.074 Sum_probs=42.2
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHcCCCCC-CCCCHHHHHHHHHHHHHHH
Q psy14122 38 ESKKVAEVELRETPERVQESLRQLKQMLKGPWDP-KVLSTDQILRVLYLIHLAA 90 (168)
Q Consensus 38 ~~~~~A~~~L~E~~~~R~~~~~~lr~~i~g~~dp-~~~s~~~~~r~~~~~~E~~ 90 (168)
......+..++++++-|+...+..++.+.++..+ ...+.+++-...-|++|.+
T Consensus 130 ~l~~~ve~a~~~d~~fR~ac~~ms~~~l~~rl~~g~~~~e~~l~~a~~YilaEl 183 (247)
T 3oqv_A 130 AVRERTDRAFEEDAEFATACEDMVRAVVMNRPGDGVGISAEHLRAGLNYVLAEA 183 (247)
T ss_dssp HHHHHHHHHHHHCHHHHHHHHHHHHHHHHTCSSSCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCHHHHHHHHHHHHHHHHcccCCCCCCCHHHHHHHHHHHHHhh
Confidence 3456778899999999999999999999977633 4567777777777888764
No 13
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=32.99 E-value=86 Score=20.40 Aligned_cols=52 Identities=12% Similarity=0.083 Sum_probs=35.5
Q ss_pred cEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHHH
Q psy14122 100 GGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWRL 156 (168)
Q Consensus 100 G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~i 156 (168)
.-.+|+|+++++.= +.+.+..++.+...+-.-+=+.+.++|++.-..-++.+
T Consensus 48 ~~~vvlDls~v~~i-----DSsGl~~L~~~~~~~~~~~g~~l~l~~~~~~v~~~l~~ 99 (121)
T 3t6o_A 48 PRKVLIDLEGVEFF-----GSSFIELLVRGWKRIKEDQQGVFALCSVSPYCVEVLQV 99 (121)
T ss_dssp SCEEEEECTTCCEE-----CHHHHHHHHHHHHHHTTSTTCEEEEESCCHHHHHHHTT
T ss_pred CCeEEEECCCCCEE-----cHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHH
Confidence 34699999998863 55666666666654432144678999998877766654
No 14
>1sbo_A Putative anti-sigma factor antagonist TM1442; open sandwich, JCSG, structural genomics, joint center for structural genomics, PSI; NMR {Thermotoga maritima} SCOP: c.13.2.1 PDB: 1t6r_A* 1vc1_A
Probab=32.57 E-value=92 Score=19.42 Aligned_cols=50 Identities=22% Similarity=0.204 Sum_probs=33.3
Q ss_pred EEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHHHH
Q psy14122 102 VIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWRLF 157 (168)
Q Consensus 102 v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~iv 157 (168)
.+|+|+++++.= +.+.+..+..+.+.+ -.+=+.+.++|.+.-+.-++...
T Consensus 46 ~vvlDls~v~~i-----Dssgl~~L~~~~~~~-~~~g~~l~l~~~~~~v~~~l~~~ 95 (110)
T 1sbo_A 46 KIVLDLSSVSYM-----DSAGLGTLVVILKDA-KINGKEFILSSLKESISRILKLT 95 (110)
T ss_dssp EEEEECTTCCCB-----CHHHHHHHHHHHHHH-HHTTCEEEEESCCHHHHHHHHHT
T ss_pred EEEEECCCCcEE-----ccHHHHHHHHHHHHH-HHcCCEEEEEeCCHHHHHHHHHh
Confidence 479999998763 555555555555433 22336789999988777766654
No 15
>2ook_A Hypothetical protein; structural genomics, JOIN for structural genomics, JCSG, protein structure initiative unknown function; HET: MSE; 1.80A {Shewanella frigidimarina} SCOP: c.13.2.2
Probab=32.23 E-value=15 Score=25.11 Aligned_cols=83 Identities=13% Similarity=0.119 Sum_probs=58.4
Q ss_pred CCCHHHHHHHHHHHHHHHHhcC-CCeeccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHH
Q psy14122 73 VLSTDQILRVLYLIHLAAIREP-ESQVRGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFN 151 (168)
Q Consensus 73 ~~s~~~~~r~~~~~~E~~~~~~-~~qi~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~ 151 (168)
+.|.+|+-. ..=.+|..+.+. ...++-++.+-|++|++++-++. +.. +.-..-..+.++-||-.+.+..
T Consensus 29 ~lt~eD~~~-l~~~i~~~l~~~~~~~i~lL~~~~~f~G~~~~A~~~-d~k--------~~~~h~~~~~RiAvV~d~~W~~ 98 (127)
T 2ook_A 29 TLTHEDYLV-ITPMLEGALSQVDQPKVSLFLDATELDGWDLRAAWD-DLK--------LGLKHKSEFERVAILGNKDWQE 98 (127)
T ss_dssp EECHHHHHH-HHHHHHHHHTTCCCSSCCEEEEEEEEEEECTTCGGG-GCC--------CCCTTSCCEEEEEEECCSSCCT
T ss_pred eECHHHHHH-HHHHHHHHHhhccCCCEEEEEEccCCCCCCHHHHHH-HHH--------hhhhhHhcCCEEEEEcChHHHH
Confidence 467778774 566777777651 22366677777899999887653 111 1123566789999999999999
Q ss_pred HHHHHHhhhhcHHh
Q psy14122 152 LVWRLFKPFIREKL 165 (168)
Q Consensus 152 ~i~~ivkpfL~~k~ 165 (168)
.+.++..+|++..+
T Consensus 99 ~~~~~~~~~~~~ev 112 (127)
T 2ook_A 99 WAAKIGSWFIAGEI 112 (127)
T ss_dssp TTTTGGGGCCEEEE
T ss_pred HHHHHHhhCcCCce
Confidence 99999999987544
No 16
>3ct6_A PTS-dependent dihydroxyacetone kinase, phosphotransferase subunit DHAM; mixed alpha beta structure, glycerol metabolism; 1.10A {Lactococcus lactis} SCOP: c.54.1.2 PDB: 3cr3_C*
Probab=30.53 E-value=59 Score=22.32 Aligned_cols=41 Identities=15% Similarity=0.117 Sum_probs=24.9
Q ss_pred ccEEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHH
Q psy14122 99 RGGVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWR 155 (168)
Q Consensus 99 ~G~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~ 155 (168)
+|++++.|+ |-|..+. ...+. + .. .+++++|+|-+...+..
T Consensus 59 dgVlvltDL-Ggsp~N~--------~~al~-~--~~----~~v~viNlPmvega~~a 99 (131)
T 3ct6_A 59 DNLLTFFDL-GSARMNL--------DLVSE-M--TD----KELTIFNVPLIEGAYTA 99 (131)
T ss_dssp SEEEEEESS-GGGHHHH--------HHHHH-T--CS----SEEEECCSCHHHHHHHH
T ss_pred CCEEEEEeC-CCChHHH--------HHHHH-h--cC----CCEEEEEhhHHHHHHHH
Confidence 799999999 6544311 11111 1 11 27888899999655543
No 17
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=28.68 E-value=1.3e+02 Score=20.02 Aligned_cols=50 Identities=10% Similarity=-0.031 Sum_probs=33.4
Q ss_pred EEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHHH
Q psy14122 101 GVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWRL 156 (168)
Q Consensus 101 ~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~i 156 (168)
-.+|+||++++. ++.+.+..+..+... +-.+=..+++.|.+.-..-++..
T Consensus 65 ~~vvlDls~v~~-----iDssgl~~L~~~~~~-~~~~g~~l~l~~~~~~v~~~l~~ 114 (143)
T 3llo_A 65 HTVILDFTQVNF-----MDSVGVKTLAGIVKE-YGDVGIYVYLAGCSAQVVNDLTS 114 (143)
T ss_dssp SEEEEECTTCCC-----CCHHHHHHHHHHHHH-HHTTTCEEEEESCCHHHHHHHHH
T ss_pred eEEEEECCCCcc-----ccHHHHHHHHHHHHH-HHHCCCEEEEEeCCHHHHHHHHh
Confidence 469999999876 355555555555443 33455789999988776666554
No 18
>3uws_A Hypothetical protein; clostripain family protein, peptidase_C11, structural genomi center for structural genomics, JCSG; HET: MSE; 1.70A {Parabacteroides merdae}
Probab=22.71 E-value=1.8e+02 Score=19.65 Aligned_cols=28 Identities=7% Similarity=0.075 Sum_probs=24.5
Q ss_pred cCHHHHHHHHHHhhhccceeeeeEEEEe
Q psy14122 118 FTPTFSYKLLTFIQDALPLRVKEVHIVK 145 (168)
Q Consensus 118 ~~~~~~k~~~~~~q~~yP~Rl~~i~iIN 145 (168)
-++..++.+++.....||..-.++.+=+
T Consensus 84 ~d~~~l~~~l~~~~~~~PA~~y~LIlw~ 111 (126)
T 3uws_A 84 ADPDVMRSVIGEVVSQYPADSYGLVLWS 111 (126)
T ss_dssp TSHHHHHHHHHHHHHHSCEEEEEEEEES
T ss_pred CCHHHHHHHHHHHHHhCCccceEEEEEe
Confidence 3799999999999999999988887754
No 19
>4dgh_A Sulfate permease family protein; STAS domain, anion exchange, membrane, transport protein; HET: MSE; 1.90A {Vibrio cholerae} PDB: 3mgl_A*
Probab=21.92 E-value=1.7e+02 Score=19.08 Aligned_cols=50 Identities=16% Similarity=0.010 Sum_probs=33.3
Q ss_pred EEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHHH
Q psy14122 101 GVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWRL 156 (168)
Q Consensus 101 ~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~i 156 (168)
-.+|+|+++++.= +.+.+..+..+... +-.+=+.+++.|.+.-..-++..
T Consensus 50 ~~vvlDls~v~~i-----Dssgl~~L~~~~~~-~~~~g~~l~l~~~~~~v~~~l~~ 99 (130)
T 4dgh_A 50 QILILRLKWVPFM-----DITGIQTLEEMIQS-FHKRGIKVLISGANSRVSQKLVK 99 (130)
T ss_dssp SEEEEECTTCCCC-----CHHHHHHHHHHHHH-HHTTTCEEEEECCCHHHHHHHHH
T ss_pred CEEEEECCCCCcc-----cHHHHHHHHHHHHH-HHHCCCEEEEEcCCHHHHHHHHH
Confidence 4699999998763 55555555555443 33445789999998776665554
No 20
>3ny7_A YCHM protein, sulfate transporter; fatty acid biosynthesis(FAB), bicarbonate transport, anion T membrane protein, STAS domain, SLC26; HET: SXM; 1.92A {Escherichia coli}
Probab=21.31 E-value=1.8e+02 Score=18.89 Aligned_cols=49 Identities=8% Similarity=0.054 Sum_probs=35.4
Q ss_pred EEEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHHH
Q psy14122 101 GVIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWRL 156 (168)
Q Consensus 101 ~v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~i 156 (168)
-.+|+|+++++. ++.+.+..+..+.+.+- . =+.+++.|.+.-..-++..
T Consensus 47 ~~vilDl~~v~~-----iDssgl~~L~~~~~~~~-~-g~~l~l~~~~~~v~~~l~~ 95 (118)
T 3ny7_A 47 RIVILKWDAVPV-----LDAGGLDAFQRFVKRLP-E-GCELRVCNVEFQPLRTMAR 95 (118)
T ss_dssp SEEEEEEEECCC-----BCHHHHHHHHHHHHHCC-T-TCEEEEECCCHHHHHHHHH
T ss_pred cEEEEEcCCCCe-----ecHHHHHHHHHHHHHHH-C-CCEEEEecCCHHHHHHHHH
Confidence 469999998875 46677777777776543 3 5789999988777666554
No 21
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=21.18 E-value=1.1e+02 Score=19.63 Aligned_cols=50 Identities=12% Similarity=0.058 Sum_probs=34.4
Q ss_pred EEEEeCCCCCcccccccCHHHHHHHHHHhhhccceeeeeEEEEeCChhHHHHHHHH
Q psy14122 102 VIVLDFDGLSTKQALQFTPTFSYKLLTFIQDALPLRVKEVHIVKEPIYFNLVWRLF 157 (168)
Q Consensus 102 v~I~Dl~g~sl~~~~~~~~~~~k~~~~~~q~~yP~Rl~~i~iIN~P~~f~~i~~iv 157 (168)
.+|+|+++++.= +.+.+..++.+.+.+- .+=+.+.++|++.-+.-++.+.
T Consensus 44 ~vvlDls~v~~i-----Dssgl~~L~~~~~~~~-~~g~~l~l~~~~~~v~~~l~~~ 93 (117)
T 4hyl_A 44 KMILDLREVSYM-----SSAGLRVLLSLYRHTS-NQQGALVLVGVSEEIRDTMEIT 93 (117)
T ss_dssp EEEEEEEEEEEE-----CHHHHHHHHHHHHHHH-HTTCEEEEECCCHHHHHHHHHH
T ss_pred eEEEECCCCcEE-----cHHHHHHHHHHHHHHH-HcCCEEEEEeCCHHHHHHHHHh
Confidence 899999998753 5555555555554432 2346789999998877777654
Done!