BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy14129
(160 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2BG9|A Chain A, Refined Structure Of The Nicotinic Acetylcholine Receptor
At 4a Resolution.
pdb|2BG9|D Chain D, Refined Structure Of The Nicotinic Acetylcholine Receptor
At 4a Resolution
Length = 370
Score = 87.8 bits (216), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W D L+W+P YG IK+I L +VW PDL +N+A G D + T + G I
Sbjct: 58 QQWIDVRLRWNPADYGGIKKIRLPSDDVWLPDLVLYNNADG-DFAIVHMTKLLLDYTGKI 116
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
W PP F+ YC + +T++PFD Q C + LG W YDG +
Sbjct: 117 MWTPPAIFKSYCEIIVTHFPFDQQNCTMKLGIWTYDGTKV 156
>pdb|4AQ5|A Chain A, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ5|D Chain D, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ9|A Chain A, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
pdb|4AQ9|D Chain D, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
Length = 461
Score = 87.4 bits (215), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W D L+W+P YG IK+I L +VW PDL +N+A G D + T + G I
Sbjct: 82 QQWIDVRLRWNPADYGGIKKIRLPSDDVWLPDLVLYNNADG-DFAIVHMTKLLLDYTGKI 140
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
W PP F+ YC + +T++PFD Q C + LG W YDG +
Sbjct: 141 MWTPPAIFKSYCEIIVTHFPFDQQNCTMKLGIWTYDGTKV 180
>pdb|2QC1|B Chain B, Crystal Structure Of The Extracellular Domain Of The
Nicotinic Acetylcholine Receptor 1 Subunit Bound To
Alpha-Bungarotoxin At 1.9 A Resolution
Length = 212
Score = 83.2 bits (204), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 63/100 (63%), Gaps = 1/100 (1%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W D L+W+P YG +K+I++ +++W+PD+ +N+A G D + T + G I
Sbjct: 59 QQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDVVLYNNADG-DFAIVKFTKVLLDYTGHI 117
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
+W PP F+ YC + +T++PFD Q C + LG+ YDG+ +
Sbjct: 118 TWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTRTYDGSAV 157
>pdb|4AQ5|B Chain B, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ9|B Chain B, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
Length = 493
Score = 68.6 bits (166), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 18 CTQTSLHSIEKKVDQT-----LNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTF 72
T TSL + +K ++ LN W D LQWDP Y IK + + +VWQPD+
Sbjct: 59 LTLTSLLILNEKNEEMTTSVFLNLA-WTDYRLQWDPAAYEGIKDLSIPSDDVWQPDIVLM 117
Query: 73 NSAGGNDVSPFGETYHI---ASSDGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSW 129
N+ G+ F T H+ G +SW P ++ C + + Y+PFD Q C ++ S+
Sbjct: 118 NNNDGS----FEITLHVNVLVQHTGAVSWHPSAIYRSSCTIKVMYFPFDWQNCTMVFKSY 173
Query: 130 VYDGNNI 136
YD + +
Sbjct: 174 TYDTSEV 180
>pdb|2BG9|B Chain B, Refined Structure Of The Nicotinic Acetylcholine Receptor
At 4a Resolution
Length = 370
Score = 68.6 bits (166), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 63/126 (50%), Gaps = 13/126 (10%)
Query: 19 TQTSLHSIEKKVDQT-----LNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFN 73
T TSL + +K ++ LN W D LQWDP Y IK + + +VWQPD+ N
Sbjct: 36 TLTSLLILNEKNEEMTTSVFLNLA-WTDYRLQWDPAAYEGIKDLSIPSDDVWQPDIVLMN 94
Query: 74 SAGGNDVSPFGETYHI---ASSDGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWV 130
+ G+ F T H+ G +SW P ++ C + + Y+PFD Q C ++ S+
Sbjct: 95 NNDGS----FEITLHVNVLVQHTGAVSWHPSAIYRSSCTIKVMYFPFDWQNCTMVFKSYT 150
Query: 131 YDGNNI 136
YD + +
Sbjct: 151 YDTSEV 156
>pdb|2BG9|C Chain C, Refined Structure Of The Nicotinic Acetylcholine Receptor
At 4a Resolution
Length = 369
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 28 KKVDQTLNFK-----KWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGN-DVS 81
K+ D+TL WYD L W+ +Y DI + L P+ +W PD+ N+ G +V+
Sbjct: 46 KETDETLTTNVWMDHAWYDHRLTWNASEYSDISILRLRPELIWIPDIVLQNNNDGQYNVA 105
Query: 82 PFGETYHIASSDGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
F + +G ++W+PP F+ C +++ Y+PFD Q C L + Y+ N I
Sbjct: 106 YFCNV--LVRPNGYVTWLPPAIFRSSCPINVLYFPFDWQNCSLKFTALNYNANEI 158
>pdb|4AQ5|C Chain C, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ9|C Chain C, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
Length = 522
Score = 67.8 bits (164), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 60/115 (52%), Gaps = 8/115 (6%)
Query: 28 KKVDQTLNFK-----KWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGN-DVS 81
K+ D+TL WYD L W+ +Y DI + L P+ +W PD+ N+ G +V+
Sbjct: 67 KETDETLTTNVWMDHAWYDHRLTWNASEYSDISILRLRPELIWIPDIVLQNNNDGQYNVA 126
Query: 82 PFGETYHIASSDGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
F + +G ++W+PP F+ C +++ Y+PFD Q C L + Y+ N I
Sbjct: 127 YFCNV--LVRPNGYVTWLPPAIFRSSCPINVLYFPFDWQNCSLKFTALNYNANEI 179
>pdb|4AFG|A Chain A, Capitella Teleta Achbp In Complex With Varenicline
pdb|4AFG|B Chain B, Capitella Teleta Achbp In Complex With Varenicline
pdb|4AFG|C Chain C, Capitella Teleta Achbp In Complex With Varenicline
pdb|4AFG|D Chain D, Capitella Teleta Achbp In Complex With Varenicline
pdb|4AFG|E Chain E, Capitella Teleta Achbp In Complex With Varenicline
pdb|4AFH|A Chain A, Capitella Teleta Achbp In Complex With Lobeline
pdb|4AFH|B Chain B, Capitella Teleta Achbp In Complex With Lobeline
pdb|4AFH|C Chain C, Capitella Teleta Achbp In Complex With Lobeline
pdb|4AFH|D Chain D, Capitella Teleta Achbp In Complex With Lobeline
pdb|4AFH|E Chain E, Capitella Teleta Achbp In Complex With Lobeline
pdb|4B5D|A Chain A, Capitella Teleta Achbp In Complex With Psychonicline
(3-((2(S)-
Azetidinyl)methoxy)-5-((1s,
2r)-2-(2-Hydroxyethyl)cyclopropyl) Pyridine)
pdb|4B5D|B Chain B, Capitella Teleta Achbp In Complex With Psychonicline
(3-((2(S)-
Azetidinyl)methoxy)-5-((1s,
2r)-2-(2-Hydroxyethyl)cyclopropyl) Pyridine)
pdb|4B5D|C Chain C, Capitella Teleta Achbp In Complex With Psychonicline
(3-((2(S)-
Azetidinyl)methoxy)-5-((1s,
2r)-2-(2-Hydroxyethyl)cyclopropyl) Pyridine)
pdb|4B5D|D Chain D, Capitella Teleta Achbp In Complex With Psychonicline
(3-((2(S)-
Azetidinyl)methoxy)-5-((1s,
2r)-2-(2-Hydroxyethyl)cyclopropyl) Pyridine)
pdb|4B5D|E Chain E, Capitella Teleta Achbp In Complex With Psychonicline
(3-((2(S)-
Azetidinyl)methoxy)-5-((1s,
2r)-2-(2-Hydroxyethyl)cyclopropyl) Pyridine)
Length = 230
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 39 WYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISW 98
W D +L+WDP+ D ++I ++P E+W PD+ FNS D++ T I S+G + W
Sbjct: 69 WVDTILRWDPEPPFDFQKIEISPDEIWTPDIKLFNSVDL-DMTLDRTTQAIVFSNGTVLW 127
Query: 99 VPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNID 137
+PP +V C D C GSWVY + +D
Sbjct: 128 IPPAVLKVLC-----VSQDDVDSCHFQFGSWVYSVDEVD 161
>pdb|4AQ5|E Chain E, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ9|E Chain E, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
Length = 488
Score = 59.3 bits (142), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 8/144 (5%)
Query: 17 RCTQTSLHSI-EKKVDQTLNF---KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTF 72
+ T T+L S+ EK+ T N +W D L W+ +Y I + + + +W PD+
Sbjct: 33 KLTLTNLISLNEKEEALTTNVWIEIQWNDYRLSWNTSEYEGIDLVRIPSELLWLPDVVLE 92
Query: 73 NSAGGN-DVSPFGETYHIASSDGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVY 131
N+ G +V+ + + +DG + W+PP ++ C + +TY+PFD Q C L+ S Y
Sbjct: 93 NNVDGQFEVAYYANV--LVYNDGSMYWLPPAIYRSTCPIAVTYFPFDWQNCSLVFRSQTY 150
Query: 132 DGNNIDFLACPSRSMPLIRWARRD 155
+ + ++ L + ++ W D
Sbjct: 151 NAHEVN-LQLSAEEGEVVEWIHID 173
>pdb|2BG9|E Chain E, Refined Structure Of The Nicotinic Acetylcholine Receptor
At 4a Resolution
Length = 370
Score = 57.8 bits (138), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 66/127 (51%), Gaps = 7/127 (5%)
Query: 17 RCTQTSLHSI-EKKVDQTLNF---KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTF 72
+ T T+L S+ EK+ T N +W D L W+ +Y I + + + +W PD+
Sbjct: 33 KLTLTNLISLNEKEEALTTNVWIEIQWNDYRLSWNTSEYEGIDLVRIPSELLWLPDVVLE 92
Query: 73 NSAGGN-DVSPFGETYHIASSDGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVY 131
N+ G +V+ + + +DG + W+PP ++ C + +TY+PFD Q C L+ S Y
Sbjct: 93 NNVDGQFEVAYYANV--LVYNDGSMYWLPPAIYRSTCPIAVTYFPFDWQNCSLVFRSQTY 150
Query: 132 DGNNIDF 138
+ + ++
Sbjct: 151 NAHEVNL 157
>pdb|2YMD|A Chain A, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|B Chain B, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|C Chain C, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|D Chain D, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|E Chain E, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|F Chain F, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|G Chain G, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|H Chain H, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|I Chain I, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|J Chain J, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
Length = 212
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 47/103 (45%), Gaps = 5/103 (4%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ + S V + + DG +
Sbjct: 56 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYEST--RPVQVLSPQIAVVTHDGSV 113
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQV-CELILGSWVYDGNNIDF 138
++P + C D T + V C L GSWVY G ID
Sbjct: 114 MFIPAQRLSFMC--DPTGVDSEEGVTCALTFGSWVYSGFEIDL 154
>pdb|2XNT|A Chain A, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|B Chain B, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|C Chain C, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|D Chain D, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|E Chain E, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|F Chain F, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|G Chain G, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|H Chain H, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|I Chain I, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|J Chain J, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNU|A Chain A, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNU|B Chain B, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNU|C Chain C, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNU|D Chain D, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNU|E Chain E, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|A Chain A, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|B Chain B, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|C Chain C, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|D Chain D, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|E Chain E, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|F Chain F, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|G Chain G, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|H Chain H, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|I Chain I, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|J Chain J, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
Length = 236
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 75 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 132
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQV-CELILGSWVYDGNNIDF 138
++P + C D T + V C + GSWVY G ID
Sbjct: 133 MFIPAQRLSFMC--DPTGVDSEEGVTCAVKFGSWVYSGFEIDL 173
>pdb|2XZ6|A Chain A, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|B Chain B, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|C Chain C, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|D Chain D, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|E Chain E, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|F Chain F, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|G Chain G, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|H Chain H, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|I Chain I, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|J Chain J, Mtset-Modified Y53c Mutant Of Aplysia Achbp
Length = 217
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 56 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 113
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQV-CELILGSWVYDGNNIDF 138
++P + C D T + V C + GSWVY G ID
Sbjct: 114 MFIPAQRLSFMC--DPTGVDSEEGVTCAVKFGSWVYSGFEIDL 154
>pdb|2YME|A Chain A, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|B Chain B, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|C Chain C, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|D Chain D, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|E Chain E, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|F Chain F, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|G Chain G, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|H Chain H, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|I Chain I, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|J Chain J, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
Length = 205
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 56 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 113
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQV-CELILGSWVYDGNNIDF 138
++P + C D T + V C + GSWVY G ID
Sbjct: 114 MFIPAQRLSFMC--DPTGVDSEEGVTCAVKFGSWVYSGFEIDL 154
>pdb|2XZ5|A Chain A, Mmts-Modified Y53c Mutant Of Aplysia Achbp In Complex With
Acetylcholine
pdb|2XZ5|B Chain B, Mmts-Modified Y53c Mutant Of Aplysia Achbp In Complex With
Acetylcholine
pdb|2XZ5|C Chain C, Mmts-Modified Y53c Mutant Of Aplysia Achbp In Complex With
Acetylcholine
pdb|2XZ5|D Chain D, Mmts-Modified Y53c Mutant Of Aplysia Achbp In Complex With
Acetylcholine
pdb|2XZ5|E Chain E, Mmts-Modified Y53c Mutant Of Aplysia Achbp In Complex With
Acetylcholine
Length = 217
Score = 50.8 bits (120), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 56 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 113
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQV-CELILGSWVYDGNNIDF 138
++P + C D T + V C + GSWVY G ID
Sbjct: 114 MFIPAQRLSFMC--DPTGVDSEEGVTCAVKFGSWVYSGFEIDL 154
>pdb|2BR7|A Chain A, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With Hepes
pdb|2BR7|B Chain B, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With Hepes
pdb|2BR7|C Chain C, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With Hepes
pdb|2BR7|D Chain D, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With Hepes
pdb|2BR7|E Chain E, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With Hepes
pdb|2BR8|A Chain A, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With An Alpha-
Conotoxin Pnia Variant
pdb|2BR8|B Chain B, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With An Alpha-
Conotoxin Pnia Variant
pdb|2BR8|C Chain C, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With An Alpha-
Conotoxin Pnia Variant
pdb|2BR8|D Chain D, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With An Alpha-
Conotoxin Pnia Variant
pdb|2BR8|E Chain E, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With An Alpha-
Conotoxin Pnia Variant
pdb|2C9T|A Chain A, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|B Chain B, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|C Chain C, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|D Chain D, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|E Chain E, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|F Chain F, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|G Chain G, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|H Chain H, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|I Chain I, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|J Chain J, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2UZ6|A Chain A, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|B Chain B, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|C Chain C, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|D Chain D, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|E Chain E, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|F Chain F, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|G Chain G, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|H Chain H, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|I Chain I, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|J Chain J, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2W8F|A Chain A, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|B Chain B, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|C Chain C, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|D Chain D, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|E Chain E, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|F Chain F, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|G Chain G, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|H Chain H, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|I Chain I, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|J Chain J, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8G|A Chain A, Aplysia Californica Achbp Bound To In Silico Compound 35
pdb|2W8G|B Chain B, Aplysia Californica Achbp Bound To In Silico Compound 35
pdb|2W8G|C Chain C, Aplysia Californica Achbp Bound To In Silico Compound 35
pdb|2W8G|D Chain D, Aplysia Californica Achbp Bound To In Silico Compound 35
pdb|2W8G|E Chain E, Aplysia Californica Achbp Bound To In Silico Compound 35
pdb|2XYS|A Chain A, Crystal Structure Of Aplysia Californica Achbp In Complex
With Strychnine
pdb|2XYS|B Chain B, Crystal Structure Of Aplysia Californica Achbp In Complex
With Strychnine
pdb|2XYS|C Chain C, Crystal Structure Of Aplysia Californica Achbp In Complex
With Strychnine
pdb|2XYS|D Chain D, Crystal Structure Of Aplysia Californica Achbp In Complex
With Strychnine
pdb|2XYS|E Chain E, Crystal Structure Of Aplysia Californica Achbp In Complex
With Strychnine
pdb|2XYT|A Chain A, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|B Chain B, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|C Chain C, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|D Chain D, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|E Chain E, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|F Chain F, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|G Chain G, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|H Chain H, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|I Chain I, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|J Chain J, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2Y7Y|A Chain A, Aplysia Californica Achbp In Apo State
pdb|2Y7Y|B Chain B, Aplysia Californica Achbp In Apo State
pdb|2Y7Y|C Chain C, Aplysia Californica Achbp In Apo State
pdb|2Y7Y|D Chain D, Aplysia Californica Achbp In Apo State
pdb|2Y7Y|E Chain E, Aplysia Californica Achbp In Apo State
pdb|2Y54|A Chain A, Fragment Growing Induces Conformational Changes In
Acetylcholine- Binding Protein: A Structural And
Thermodynamic Analysis - (Fragment 1)
pdb|2Y54|B Chain B, Fragment Growing Induces Conformational Changes In
Acetylcholine- Binding Protein: A Structural And
Thermodynamic Analysis - (Fragment 1)
pdb|2Y54|C Chain C, Fragment Growing Induces Conformational Changes In
Acetylcholine- Binding Protein: A Structural And
Thermodynamic Analysis - (Fragment 1)
pdb|2Y54|D Chain D, Fragment Growing Induces Conformational Changes In
Acetylcholine- Binding Protein: A Structural And
Thermodynamic Analysis - (Fragment 1)
pdb|2Y54|E Chain E, Fragment Growing Induces Conformational Changes In
Acetylcholine- Binding Protein: A Structural And
Thermodynamic Analysis - (Fragment 1)
pdb|2Y56|A Chain A, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 3)
pdb|2Y56|B Chain B, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 3)
pdb|2Y56|C Chain C, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 3)
pdb|2Y56|D Chain D, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 3)
pdb|2Y56|E Chain E, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 3)
pdb|2Y57|A Chain A, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 4)
pdb|2Y57|B Chain B, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 4)
pdb|2Y57|C Chain C, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 4)
pdb|2Y57|D Chain D, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 4)
pdb|2Y57|E Chain E, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 4)
pdb|2Y58|A Chain A, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 6)
pdb|2Y58|B Chain B, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 6)
pdb|2Y58|C Chain C, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 6)
pdb|2Y58|D Chain D, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 6)
pdb|2Y58|E Chain E, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 6)
pdb|4AFO|A Chain A, Aplysia Californica Achbp In Complex With Cytisine
pdb|4AFO|B Chain B, Aplysia Californica Achbp In Complex With Cytisine
pdb|4AFO|C Chain C, Aplysia Californica Achbp In Complex With Cytisine
pdb|4AFO|D Chain D, Aplysia Californica Achbp In Complex With Cytisine
pdb|4AFO|E Chain E, Aplysia Californica Achbp In Complex With Cytisine
pdb|4AFT|A Chain A, Aplysia Californica Achbp In Complex With Varenicline
pdb|4AFT|B Chain B, Aplysia Californica Achbp In Complex With Varenicline
pdb|4AFT|C Chain C, Aplysia Californica Achbp In Complex With Varenicline
pdb|4AFT|D Chain D, Aplysia Californica Achbp In Complex With Varenicline
pdb|4AFT|E Chain E, Aplysia Californica Achbp In Complex With Varenicline
Length = 217
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/103 (28%), Positives = 48/103 (46%), Gaps = 5/103 (4%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 56 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 113
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQV-CELILGSWVYDGNNIDF 138
++P + C D T + V C + GSWVY G ID
Sbjct: 114 MFIPAQRLSFMC--DPTGVDSEEGVTCAVKFGSWVYSGFEIDL 154
>pdb|2BYP|A Chain A, Crystal Structure Of Aplysia Californica Achbp In Complex
With Alpha-Conotoxin Imi
pdb|2BYP|B Chain B, Crystal Structure Of Aplysia Californica Achbp In Complex
With Alpha-Conotoxin Imi
pdb|2BYP|C Chain C, Crystal Structure Of Aplysia Californica Achbp In Complex
With Alpha-Conotoxin Imi
pdb|2BYP|D Chain D, Crystal Structure Of Aplysia Californica Achbp In Complex
With Alpha-Conotoxin Imi
pdb|2BYP|E Chain E, Crystal Structure Of Aplysia Californica Achbp In Complex
With Alpha-Conotoxin Imi
Length = 214
Score = 50.1 bits (118), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 64 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 121
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQ---VCELILGSWVYDGNNIDF 138
++P + C D T DS+ C + GSWVY G ID
Sbjct: 122 MFIPAQRLSFMC--DPT--GVDSEEGATCAVKFGSWVYSGFEIDL 162
>pdb|2BYN|A Chain A, Crystal Structure Of Apo Achbp From Aplysia Californica
pdb|2BYN|B Chain B, Crystal Structure Of Apo Achbp From Aplysia Californica
pdb|2BYN|C Chain C, Crystal Structure Of Apo Achbp From Aplysia Californica
pdb|2BYN|D Chain D, Crystal Structure Of Apo Achbp From Aplysia Californica
pdb|2BYN|E Chain E, Crystal Structure Of Apo Achbp From Aplysia Californica
pdb|2BYQ|A Chain A, Crystal Structure Of Aplysia Californica Achbp In Complex
With Epibatidine
pdb|2BYQ|B Chain B, Crystal Structure Of Aplysia Californica Achbp In Complex
With Epibatidine
pdb|2BYQ|C Chain C, Crystal Structure Of Aplysia Californica Achbp In Complex
With Epibatidine
pdb|2BYQ|D Chain D, Crystal Structure Of Aplysia Californica Achbp In Complex
With Epibatidine
pdb|2BYQ|E Chain E, Crystal Structure Of Aplysia Californica Achbp In Complex
With Epibatidine
pdb|2BYR|A Chain A, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|B Chain B, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|C Chain C, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|D Chain D, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|E Chain E, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|F Chain F, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|G Chain G, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|H Chain H, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|I Chain I, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|J Chain J, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYS|A Chain A, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|B Chain B, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|C Chain C, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|D Chain D, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|E Chain E, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|F Chain F, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|G Chain G, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|H Chain H, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|I Chain I, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|J Chain J, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|3C79|A Chain A, Crystal Structure Of Aplysia Californica Achbp In Complex
With The Neonicotinoid Imidacloprid
pdb|3C79|B Chain B, Crystal Structure Of Aplysia Californica Achbp In Complex
With The Neonicotinoid Imidacloprid
pdb|3C79|C Chain C, Crystal Structure Of Aplysia Californica Achbp In Complex
With The Neonicotinoid Imidacloprid
pdb|3C79|D Chain D, Crystal Structure Of Aplysia Californica Achbp In Complex
With The Neonicotinoid Imidacloprid
pdb|3C79|E Chain E, Crystal Structure Of Aplysia Californica Achbp In Complex
With The Neonicotinoid Imidacloprid
pdb|3C84|A Chain A, Crystal Structure Of A Complex Of Achbp From Aplysia
Californica And The Neonicotinoid Thiacloprid
pdb|3C84|B Chain B, Crystal Structure Of A Complex Of Achbp From Aplysia
Californica And The Neonicotinoid Thiacloprid
pdb|3C84|C Chain C, Crystal Structure Of A Complex Of Achbp From Aplysia
Californica And The Neonicotinoid Thiacloprid
pdb|3C84|D Chain D, Crystal Structure Of A Complex Of Achbp From Aplysia
Californica And The Neonicotinoid Thiacloprid
pdb|3C84|E Chain E, Crystal Structure Of A Complex Of Achbp From Aplysia
Californica And The Neonicotinoid Thiacloprid
pdb|2WNC|A Chain A, Crystal Structure Of Aplysia Achbp In Complex With
Tropisetron
pdb|2WNC|B Chain B, Crystal Structure Of Aplysia Achbp In Complex With
Tropisetron
pdb|2WNC|C Chain C, Crystal Structure Of Aplysia Achbp In Complex With
Tropisetron
pdb|2WNC|D Chain D, Crystal Structure Of Aplysia Achbp In Complex With
Tropisetron
pdb|2WNC|E Chain E, Crystal Structure Of Aplysia Achbp In Complex With
Tropisetron
pdb|2WNL|A Chain A, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|B Chain B, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|C Chain C, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|D Chain D, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|E Chain E, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|F Chain F, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|G Chain G, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|H Chain H, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|I Chain I, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|J Chain J, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
Length = 227
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 66 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 123
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQ---VCELILGSWVYDGNNIDF 138
++P + C D T DS+ C + GSWVY G ID
Sbjct: 124 MFIPAQRLSFMC--DPT--GVDSEEGATCAVKFGSWVYSGFEIDL 164
>pdb|3PMZ|A Chain A, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|B Chain B, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|C Chain C, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|D Chain D, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|E Chain E, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|F Chain F, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|G Chain G, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|H Chain H, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|I Chain I, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|J Chain J, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
Length = 227
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 66 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 123
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQ---VCELILGSWVYDGNNIDF 138
++P + C D T DS+ C + GSWVY G ID
Sbjct: 124 MFIPAQRLSFMC--DPT--GVDSEEGATCAVKFGSWVYSGFEIDL 164
>pdb|2PGZ|A Chain A, Crystal Structure Of Cocaine Bound To An Ach-binding
Protein
pdb|2PGZ|B Chain B, Crystal Structure Of Cocaine Bound To An Ach-binding
Protein
pdb|2PGZ|C Chain C, Crystal Structure Of Cocaine Bound To An Ach-binding
Protein
pdb|2PGZ|D Chain D, Crystal Structure Of Cocaine Bound To An Ach-binding
Protein
pdb|2PGZ|E Chain E, Crystal Structure Of Cocaine Bound To An Ach-binding
Protein
pdb|2PH9|A Chain A, Galanthamine Bound To An Ach-Binding Protein
pdb|2PH9|B Chain B, Galanthamine Bound To An Ach-Binding Protein
pdb|2PH9|C Chain C, Galanthamine Bound To An Ach-Binding Protein
pdb|2PH9|D Chain D, Galanthamine Bound To An Ach-Binding Protein
pdb|2PH9|E Chain E, Galanthamine Bound To An Ach-Binding Protein
pdb|4DBM|A Chain A, Aplysia Californica-Achbp In Complex With Triazole 18
pdb|4DBM|B Chain B, Aplysia Californica-Achbp In Complex With Triazole 18
pdb|4DBM|C Chain C, Aplysia Californica-Achbp In Complex With Triazole 18
pdb|4DBM|D Chain D, Aplysia Californica-Achbp In Complex With Triazole 18
pdb|4DBM|E Chain E, Aplysia Californica-Achbp In Complex With Triazole 18
Length = 230
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 67 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 124
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQ---VCELILGSWVYDGNNIDF 138
++P + C D T DS+ C + GSWVY G ID
Sbjct: 125 MFIPAQRLSFMC--DPT--GVDSEEGATCAVKFGSWVYSGFEIDL 165
>pdb|3GUA|A Chain A, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|B Chain B, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|C Chain C, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|D Chain D, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|E Chain E, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|F Chain F, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|G Chain G, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|H Chain H, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|I Chain I, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|J Chain J, Sulfates Bound In The Vestibule Of Achbp
Length = 217
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 67 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 124
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQ---VCELILGSWVYDGNNIDF 138
++P + C D T DS+ C + GSWVY G ID
Sbjct: 125 MFIPAQRLSFMC--DPT--GVDSEEGATCAVKFGSWVYSGFEIDL 165
>pdb|2X00|D Chain D, Crystal Structure Of A-Achbp In Complex With Gymnodimine A
Length = 227
Score = 50.1 bits (118), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 66 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 123
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQ---VCELILGSWVYDGNNIDF 138
++P + C D T DS+ C + GSWVY G ID
Sbjct: 124 MFIPAQRLSFMC--DPT--GVDSEEGATCAVKFGSWVYSGFEIDL 164
>pdb|2WN9|A Chain A, Crystal Structure Of Aplysia Achbp In Complex With 4-0h-
Dmxba
pdb|2WN9|B Chain B, Crystal Structure Of Aplysia Achbp In Complex With 4-0h-
Dmxba
pdb|2WN9|C Chain C, Crystal Structure Of Aplysia Achbp In Complex With 4-0h-
Dmxba
pdb|2WN9|D Chain D, Crystal Structure Of Aplysia Achbp In Complex With 4-0h-
Dmxba
pdb|2WN9|E Chain E, Crystal Structure Of Aplysia Achbp In Complex With 4-0h-
Dmxba
pdb|2WNJ|A Chain A, Crystal Structure Of Aplysia Achbp In Complex With Dmxba
pdb|2WNJ|B Chain B, Crystal Structure Of Aplysia Achbp In Complex With Dmxba
pdb|2WNJ|C Chain C, Crystal Structure Of Aplysia Achbp In Complex With Dmxba
pdb|2WNJ|D Chain D, Crystal Structure Of Aplysia Achbp In Complex With Dmxba
pdb|2WNJ|E Chain E, Crystal Structure Of Aplysia Achbp In Complex With Dmxba
pdb|2WZY|A Chain A, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|B Chain B, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|C Chain C, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|D Chain D, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|E Chain E, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|F Chain F, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|G Chain G, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|H Chain H, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|I Chain I, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|J Chain J, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2X00|A Chain A, Crystal Structure Of A-Achbp In Complex With Gymnodimine A
pdb|2X00|B Chain B, Crystal Structure Of A-Achbp In Complex With Gymnodimine A
pdb|2X00|C Chain C, Crystal Structure Of A-Achbp In Complex With Gymnodimine A
pdb|2X00|E Chain E, Crystal Structure Of A-Achbp In Complex With Gymnodimine A
pdb|3PEO|A Chain A, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|B Chain B, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|C Chain C, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|D Chain D, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|E Chain E, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|F Chain F, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|G Chain G, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|H Chain H, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|I Chain I, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|J Chain J, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
Length = 228
Score = 49.7 bits (117), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 49/105 (46%), Gaps = 9/105 (8%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 67 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQIAVVTHDGSV 124
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQ---VCELILGSWVYDGNNIDF 138
++P + C D T DS+ C + GSWVY G ID
Sbjct: 125 MFIPAQRLSFMC--DPT--GVDSEEGATCAVKFGSWVYSGFEIDL 165
>pdb|3T4M|A Chain A, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|B Chain B, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|C Chain C, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|D Chain D, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|E Chain E, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|F Chain F, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|G Chain G, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|H Chain H, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|I Chain I, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|J Chain J, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
Length = 230
Score = 47.0 bits (110), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 48/105 (45%), Gaps = 9/105 (8%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
++W L WDP +YG+I + ++W PD++ ++S V + + DG +
Sbjct: 67 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQNALVTHDGSV 124
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQ---VCELILGSWVYDGNNIDF 138
++P + C D T DS+ C + GSW Y G ID
Sbjct: 125 QYLPAQRLSFMC--DPT--GVDSEEGATCAVKFGSWSYSGFEIDL 165
>pdb|3SQ6|A Chain A, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|B Chain B, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|C Chain C, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|D Chain D, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|E Chain E, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|F Chain F, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|G Chain G, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|H Chain H, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|I Chain I, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|J Chain J, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ9|A Chain A, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|B Chain B, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|C Chain C, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|D Chain D, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|E Chain E, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|F Chain F, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|G Chain G, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|H Chain H, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|I Chain I, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|J Chain J, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
Length = 204
Score = 43.9 bits (102), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 49/101 (48%), Gaps = 5/101 (4%)
Query: 39 WYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISW 98
W D LQW+ +Y +KQ+ + +W PDL+ +N+ +V + +S G + +
Sbjct: 58 WTDHYLQWNVSEYPGVKQVSVPISSLWVPDLAAYNAISKPEV--LTPQLALVNSSGHVQY 115
Query: 99 VPPCQFQVYCHLDLTYWPFDS-QVCELILGSWVYDGNNIDF 138
+P + + C D++ +S C+L GSW + +D
Sbjct: 116 LPSIRQRFSC--DVSGVDTESGATCKLKFGSWTHHSRELDL 154
>pdb|4AOD|A Chain A, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 1
(Bgachbp1)
pdb|4AOD|B Chain B, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 1
(Bgachbp1)
pdb|4AOD|C Chain C, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 1
(Bgachbp1)
pdb|4AOD|D Chain D, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 1
(Bgachbp1)
pdb|4AOD|E Chain E, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 1
(Bgachbp1)
Length = 205
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 46/99 (46%), Gaps = 6/99 (6%)
Query: 39 WYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISW 98
W D L W ++ K++ + E+W PD+ F+S G ++ F + S DG +++
Sbjct: 60 WKDRCLNW-FNEFTSFKELTVPIAEIWTPDIFIFDSVGAPEI--FSDKLARVSQDGTVTY 116
Query: 99 VPPCQFQVYCHL-DLTYWPFDSQVCELILGSWVYDGNNI 136
VP + ++ C L DL C L GSW + +
Sbjct: 117 VPQLKVRLSCPLADLKLET--GVTCSLKSGSWTHSTQEL 153
>pdb|3SIO|A Chain A, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|B Chain B, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|C Chain C, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|D Chain D, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|E Chain E, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|F Chain F, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|G Chain G, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|H Chain H, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|I Chain I, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|J Chain J, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
Length = 230
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
+ W L WDP +YG+I + ++W PD++ ++S V + +S G +
Sbjct: 67 QSWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQNALVNSSGHV 124
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQ---VCELILGSWVYDGNNIDF 138
++P + C D T DS+ C + GSW Y G ID
Sbjct: 125 QYLPAQRLSFMC--DPT--GVDSEEGATCAVKFGSWSYGGWEIDL 165
>pdb|3SH1|A Chain A, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|B Chain B, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|C Chain C, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|D Chain D, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|E Chain E, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|F Chain F, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|G Chain G, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|H Chain H, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|I Chain I, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|J Chain J, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
Length = 230
Score = 43.9 bits (102), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 47/105 (44%), Gaps = 9/105 (8%)
Query: 37 KKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLI 96
+ W L WDP +YG+I + ++W PD++ ++S V + +S G +
Sbjct: 67 QSWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST--RPVQVLSPQNALVNSSGHV 124
Query: 97 SWVPPCQFQVYCHLDLTYWPFDSQ---VCELILGSWVYDGNNIDF 138
++P + C D T DS+ C + GSW Y G ID
Sbjct: 125 QYLPAQRLSFMC--DPT--GVDSEEGATCAVKFGSWSYGGWEIDL 165
>pdb|3EAM|A Chain A, An Open-Pore Structure Of A Bacterial Pentameric Ligand-
Gated Ion Channel
pdb|3EAM|B Chain B, An Open-Pore Structure Of A Bacterial Pentameric Ligand-
Gated Ion Channel
pdb|3EAM|C Chain C, An Open-Pore Structure Of A Bacterial Pentameric Ligand-
Gated Ion Channel
pdb|3EAM|D Chain D, An Open-Pore Structure Of A Bacterial Pentameric Ligand-
Gated Ion Channel
pdb|3EAM|E Chain E, An Open-Pore Structure Of A Bacterial Pentameric Ligand-
Gated Ion Channel
pdb|4HFI|A Chain A, The Glic Pentameric Ligand-gated Ion Channel At 2.4 A
Resolution
pdb|4HFI|B Chain B, The Glic Pentameric Ligand-gated Ion Channel At 2.4 A
Resolution
pdb|4HFI|C Chain C, The Glic Pentameric Ligand-gated Ion Channel At 2.4 A
Resolution
pdb|4HFI|D Chain D, The Glic Pentameric Ligand-gated Ion Channel At 2.4 A
Resolution
pdb|4HFI|E Chain E, The Glic Pentameric Ligand-gated Ion Channel At 2.4 A
Resolution
pdb|4IL4|A Chain A, The Pentameric Ligand-gated Ion Channel Glic In Complex
With Se-ddm
pdb|4IL4|B Chain B, The Pentameric Ligand-gated Ion Channel Glic In Complex
With Se-ddm
pdb|4IL4|C Chain C, The Pentameric Ligand-gated Ion Channel Glic In Complex
With Se-ddm
pdb|4IL4|D Chain D, The Pentameric Ligand-gated Ion Channel Glic In Complex
With Se-ddm
pdb|4IL4|E Chain E, The Pentameric Ligand-gated Ion Channel Glic In Complex
With Se-ddm
Length = 317
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 38 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 91
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 92 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 140
>pdb|4ILC|A Chain A, The Glic Pentameric Ligand-gated Ion Channel In Complex
With Sulfates
pdb|4ILC|B Chain B, The Glic Pentameric Ligand-gated Ion Channel In Complex
With Sulfates
pdb|4ILC|C Chain C, The Glic Pentameric Ligand-gated Ion Channel In Complex
With Sulfates
pdb|4ILC|D Chain D, The Glic Pentameric Ligand-gated Ion Channel In Complex
With Sulfates
pdb|4ILC|E Chain E, The Glic Pentameric Ligand-gated Ion Channel In Complex
With Sulfates
Length = 320
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 42 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 95
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 96 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 144
>pdb|3P4W|A Chain A, Structure Of Desflurane Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P4W|B Chain B, Structure Of Desflurane Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P4W|C Chain C, Structure Of Desflurane Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P4W|D Chain D, Structure Of Desflurane Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P4W|E Chain E, Structure Of Desflurane Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P50|A Chain A, Structure Of Propofol Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P50|B Chain B, Structure Of Propofol Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P50|C Chain C, Structure Of Propofol Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P50|D Chain D, Structure Of Propofol Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P50|E Chain E, Structure Of Propofol Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
Length = 318
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 38 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 91
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 92 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 140
>pdb|3EHZ|A Chain A, X-Ray Structure Of The Pentameric Ligand Gated Ion Channel
Of Gloebacter Violaceus (Glic) In A Presumptive Open
Conformation
pdb|3EHZ|B Chain B, X-Ray Structure Of The Pentameric Ligand Gated Ion Channel
Of Gloebacter Violaceus (Glic) In A Presumptive Open
Conformation
pdb|3EHZ|C Chain C, X-Ray Structure Of The Pentameric Ligand Gated Ion Channel
Of Gloebacter Violaceus (Glic) In A Presumptive Open
Conformation
pdb|3EHZ|D Chain D, X-Ray Structure Of The Pentameric Ligand Gated Ion Channel
Of Gloebacter Violaceus (Glic) In A Presumptive Open
Conformation
pdb|3EHZ|E Chain E, X-Ray Structure Of The Pentameric Ligand Gated Ion Channel
Of Gloebacter Violaceus (Glic) In A Presumptive Open
Conformation
pdb|2XQ3|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Br-Lidocaine
pdb|2XQ3|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Br-Lidocaine
pdb|2XQ3|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Br-Lidocaine
pdb|2XQ3|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Br-Lidocaine
pdb|2XQ3|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Br-Lidocaine
pdb|2XQ4|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetramethylarsonium (Tmas)
pdb|2XQ4|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetramethylarsonium (Tmas)
pdb|2XQ4|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetramethylarsonium (Tmas)
pdb|2XQ4|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetramethylarsonium (Tmas)
pdb|2XQ4|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetramethylarsonium (Tmas)
pdb|2XQ5|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetraethylarsonium (Teas)
pdb|2XQ5|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetraethylarsonium (Teas)
pdb|2XQ5|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetraethylarsonium (Teas)
pdb|2XQ5|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetraethylarsonium (Teas)
pdb|2XQ5|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetraethylarsonium (Teas)
pdb|2XQ6|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cesium Ion (Cs+)
pdb|2XQ6|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cesium Ion (Cs+)
pdb|2XQ6|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cesium Ion (Cs+)
pdb|2XQ6|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cesium Ion (Cs+)
pdb|2XQ6|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cesium Ion (Cs+)
pdb|2XQ7|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cadmium Ion (Cd2+)
pdb|2XQ7|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cadmium Ion (Cd2+)
pdb|2XQ7|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cadmium Ion (Cd2+)
pdb|2XQ7|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cadmium Ion (Cd2+)
pdb|2XQ7|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cadmium Ion (Cd2+)
pdb|2XQ8|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Zinc Ion (Zn2+)
pdb|2XQ8|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Zinc Ion (Zn2+)
pdb|2XQ8|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Zinc Ion (Zn2+)
pdb|2XQ8|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Zinc Ion (Zn2+)
pdb|2XQ8|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Zinc Ion (Zn2+)
pdb|2XQA|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetrabutylantimony (Tbsb)
pdb|2XQA|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetrabutylantimony (Tbsb)
pdb|2XQA|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetrabutylantimony (Tbsb)
pdb|2XQA|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetrabutylantimony (Tbsb)
pdb|2XQA|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetrabutylantimony (Tbsb)
pdb|4F8H|A Chain A, X-Ray Structure Of The Anesthetic Ketamine Bound To The
Glic Pentameric Ligand-Gated Ion Channel
pdb|4F8H|B Chain B, X-Ray Structure Of The Anesthetic Ketamine Bound To The
Glic Pentameric Ligand-Gated Ion Channel
pdb|4F8H|C Chain C, X-Ray Structure Of The Anesthetic Ketamine Bound To The
Glic Pentameric Ligand-Gated Ion Channel
pdb|4F8H|D Chain D, X-Ray Structure Of The Anesthetic Ketamine Bound To The
Glic Pentameric Ligand-Gated Ion Channel
pdb|4F8H|E Chain E, X-Ray Structure Of The Anesthetic Ketamine Bound To The
Glic Pentameric Ligand-Gated Ion Channel
Length = 317
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 38 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 91
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 92 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 140
>pdb|4IL9|A Chain A, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Bromide
pdb|4IL9|B Chain B, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Bromide
pdb|4IL9|C Chain C, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Bromide
pdb|4IL9|D Chain D, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Bromide
pdb|4IL9|E Chain E, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Bromide
pdb|4ILA|A Chain A, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Cesium
pdb|4ILA|B Chain B, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Cesium
pdb|4ILA|C Chain C, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Cesium
pdb|4ILA|D Chain D, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Cesium
pdb|4ILA|E Chain E, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Cesium
pdb|4ILB|A Chain A, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Rubidium
pdb|4ILB|B Chain B, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Rubidium
pdb|4ILB|C Chain C, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Rubidium
pdb|4ILB|D Chain D, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Rubidium
pdb|4ILB|E Chain E, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Rubidium
Length = 320
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 42 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 95
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 96 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 144
>pdb|3TLS|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel E19'p Mutant
In A Locally-Closed Conformation (Lc2 Subtype)
pdb|3TLS|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel E19'p Mutant
In A Locally-Closed Conformation (Lc2 Subtype)
pdb|3TLS|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel E19'p Mutant
In A Locally-Closed Conformation (Lc2 Subtype)
pdb|3TLS|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel E19'p Mutant
In A Locally-Closed Conformation (Lc2 Subtype)
pdb|3TLS|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel E19'p Mutant
In A Locally-Closed Conformation (Lc2 Subtype)
Length = 321
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 42 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 95
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 96 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 144
>pdb|3EI0|A Chain A, Structure Of The E221a Mutant Of The Gloebacter Violaceus
Pentameric Ligand Gated Ion Channnel (Glic)
pdb|3EI0|B Chain B, Structure Of The E221a Mutant Of The Gloebacter Violaceus
Pentameric Ligand Gated Ion Channnel (Glic)
pdb|3EI0|C Chain C, Structure Of The E221a Mutant Of The Gloebacter Violaceus
Pentameric Ligand Gated Ion Channnel (Glic)
pdb|3EI0|D Chain D, Structure Of The E221a Mutant Of The Gloebacter Violaceus
Pentameric Ligand Gated Ion Channnel (Glic)
pdb|3EI0|E Chain E, Structure Of The E221a Mutant Of The Gloebacter Violaceus
Pentameric Ligand Gated Ion Channnel (Glic)
Length = 317
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 38 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 91
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 92 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 140
>pdb|3TLW|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Oxidized Mutant In A Locally-Closed Conformation (Lc2
Subtype)
pdb|3TLW|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Oxidized Mutant In A Locally-Closed Conformation (Lc2
Subtype)
pdb|3TLW|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Oxidized Mutant In A Locally-Closed Conformation (Lc2
Subtype)
pdb|3TLW|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Oxidized Mutant In A Locally-Closed Conformation (Lc2
Subtype)
pdb|3TLW|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Oxidized Mutant In A Locally-Closed Conformation (Lc2
Subtype)
pdb|3UU4|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In The Crystal In A Locally-Closed
Conformation (Lc1 Subtype)
pdb|3UU4|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In The Crystal In A Locally-Closed
Conformation (Lc1 Subtype)
pdb|3UU4|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In The Crystal In A Locally-Closed
Conformation (Lc1 Subtype)
pdb|3UU4|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In The Crystal In A Locally-Closed
Conformation (Lc1 Subtype)
pdb|3UU4|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In The Crystal In A Locally-Closed
Conformation (Lc1 Subtype)
pdb|3UUB|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|F Chain F, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|G Chain G, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|H Chain H, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|I Chain I, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|J Chain J, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
Length = 321
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 42 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 95
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 96 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 144
>pdb|3TLV|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Oxidized Mutant In A Locally-Closed Conformation (Lc3
Subtype)
pdb|3TLV|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Oxidized Mutant In A Locally-Closed Conformation (Lc3
Subtype)
pdb|3TLV|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Oxidized Mutant In A Locally-Closed Conformation (Lc3
Subtype)
pdb|3TLV|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Oxidized Mutant In A Locally-Closed Conformation (Lc3
Subtype)
pdb|3TLV|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Oxidized Mutant In A Locally-Closed Conformation (Lc3
Subtype)
pdb|3UU6|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Mutant Reduced In Solution
pdb|3UU6|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Mutant Reduced In Solution
pdb|3UU6|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Mutant Reduced In Solution
pdb|3UU6|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Mutant Reduced In Solution
pdb|3UU6|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Mutant Reduced In Solution
Length = 321
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 42 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 95
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 96 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 144
>pdb|3LSV|A Chain A, Structure Of The A237f Mutant Of The Pentameric Ligand
Gated Channel From Gloeobacter Violaceus
pdb|3LSV|B Chain B, Structure Of The A237f Mutant Of The Pentameric Ligand
Gated Channel From Gloeobacter Violaceus
pdb|3LSV|C Chain C, Structure Of The A237f Mutant Of The Pentameric Ligand
Gated Channel From Gloeobacter Violaceus
pdb|3LSV|D Chain D, Structure Of The A237f Mutant Of The Pentameric Ligand
Gated Channel From Gloeobacter Violaceus
pdb|3LSV|E Chain E, Structure Of The A237f Mutant Of The Pentameric Ligand
Gated Channel From Gloeobacter Violaceus
Length = 317
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 38 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 91
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 92 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 140
>pdb|3UU3|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU3|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU3|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU3|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU3|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU5|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Mutant Reduced In Solution
pdb|3UU5|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Mutant Reduced In Solution
pdb|3UU5|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Mutant Reduced In Solution
pdb|3UU5|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Mutant Reduced In Solution
pdb|3UU5|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Mutant Reduced In Solution
Length = 321
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 42 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 95
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 96 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 144
>pdb|2XQ9|A Chain A, Pentameric Ligand Gated Ion Channel Glic Mutant E221a In
Complex With Tetraethylarsonium (Teas)
pdb|2XQ9|B Chain B, Pentameric Ligand Gated Ion Channel Glic Mutant E221a In
Complex With Tetraethylarsonium (Teas)
pdb|2XQ9|C Chain C, Pentameric Ligand Gated Ion Channel Glic Mutant E221a In
Complex With Tetraethylarsonium (Teas)
pdb|2XQ9|D Chain D, Pentameric Ligand Gated Ion Channel Glic Mutant E221a In
Complex With Tetraethylarsonium (Teas)
pdb|2XQ9|E Chain E, Pentameric Ligand Gated Ion Channel Glic Mutant E221a In
Complex With Tetraethylarsonium (Teas)
Length = 317
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 38 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 91
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 92 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 140
>pdb|3TLT|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel H11'f Mutant
In A Locally-Closed Conformation (Lc1 Subtype)
pdb|3TLT|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel H11'f Mutant
In A Locally-Closed Conformation (Lc1 Subtype)
pdb|3TLT|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel H11'f Mutant
In A Locally-Closed Conformation (Lc1 Subtype)
pdb|3TLT|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel H11'f Mutant
In A Locally-Closed Conformation (Lc1 Subtype)
pdb|3TLT|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel H11'f Mutant
In A Locally-Closed Conformation (Lc1 Subtype)
Length = 321
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 42 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 95
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 96 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 144
>pdb|3TLU|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3TLU|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3TLU|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3TLU|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3TLU|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU8|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Mutant Reduced In Solution
pdb|3UU8|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Mutant Reduced In Solution
pdb|3UU8|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Mutant Reduced In Solution
pdb|3UU8|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Mutant Reduced In Solution
pdb|3UU8|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Mutant Reduced In Solution
Length = 321
Score = 41.6 bits (96), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/109 (28%), Positives = 48/109 (44%), Gaps = 7/109 (6%)
Query: 29 KVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYH 88
KV+ L+ W D L +DP + G + Y P+ +W P++ N D +
Sbjct: 42 KVNAFLSLS-WKDRRLAFDPVRSGVRVKTY-EPEAIWIPEIRFVNVENARD----ADVVD 95
Query: 89 IASS-DGLISWVPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNI 136
I+ S DG + ++ +V LD +PFDSQ + L D NI
Sbjct: 96 ISVSPDGTVQYLERFSARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNI 144
>pdb|2BJ0|A Chain A, Crystal Structure Of Achbp From Bulinus Truncatus Revals
The Conserved Structural Scaffold And Sites Of Variation
In Nicotinic Acetylcholine Receptors
pdb|2BJ0|B Chain B, Crystal Structure Of Achbp From Bulinus Truncatus Revals
The Conserved Structural Scaffold And Sites Of Variation
In Nicotinic Acetylcholine Receptors
pdb|2BJ0|C Chain C, Crystal Structure Of Achbp From Bulinus Truncatus Revals
The Conserved Structural Scaffold And Sites Of Variation
In Nicotinic Acetylcholine Receptors
pdb|2BJ0|D Chain D, Crystal Structure Of Achbp From Bulinus Truncatus Revals
The Conserved Structural Scaffold And Sites Of Variation
In Nicotinic Acetylcholine Receptors
pdb|2BJ0|E Chain E, Crystal Structure Of Achbp From Bulinus Truncatus Revals
The Conserved Structural Scaffold And Sites Of Variation
In Nicotinic Acetylcholine Receptors
Length = 203
Score = 35.8 bits (81), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 38/79 (48%), Gaps = 5/79 (6%)
Query: 56 QIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISWVPPCQFQVYCHL-DLTY 114
Q+ L ++W PDLS +N+ ++ + S DG + +VP + + C L ++
Sbjct: 72 QVSLPVSKMWTPDLSFYNAIAAPEL--LSADRVVVSKDGSVIYVPSQRVRFTCDLINVDT 129
Query: 115 WPFDSQVCELILGSWVYDG 133
P C + +GSW +D
Sbjct: 130 EP--GATCRIKVGSWTHDN 146
>pdb|2ZJU|A Chain A, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Imidacloprid
pdb|2ZJU|B Chain B, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Imidacloprid
pdb|2ZJU|C Chain C, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Imidacloprid
pdb|2ZJU|D Chain D, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Imidacloprid
pdb|2ZJU|E Chain E, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Imidacloprid
pdb|2ZJV|A Chain A, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Clothianidin
pdb|2ZJV|B Chain B, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Clothianidin
pdb|2ZJV|C Chain C, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Clothianidin
pdb|2ZJV|D Chain D, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Clothianidin
pdb|2ZJV|E Chain E, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Clothianidin
Length = 214
Score = 33.9 bits (76), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 39 WYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISW 98
W D L WD D Q+ + +W PDL+ +N+ +V SDG + +
Sbjct: 62 WSDRTLAWDSSHSPD--QVSVPISSLWVPDLAAYNAISKPEV--LTPQLARVVSDGEVLY 117
Query: 99 VPPCQFQVYCHLDLTYWPFDS-QVCELILGSWVYDGNNI 136
+P + + C D++ +S C + +GSW + I
Sbjct: 118 MPSIRQRFSC--DVSGVDTESGATCRIKIGSWTHHSREI 154
>pdb|3RHW|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RI5|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RIA|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIF|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate
Length = 347
Score = 32.7 bits (73), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 59/145 (40%), Gaps = 22/145 (15%)
Query: 2 LNAHTRTLSSLHPVHRCTQTSLHSIEKKVDQTLNFKKWYDPVLQWDPKKYGDIKQIYL-A 60
+N RT+S + V+ +E TL + W D L + K G + L
Sbjct: 32 VNMLLRTISKIDVVN---------MEYSAQLTLR-ESWIDKRLSYGVKGDGQPDFVILTV 81
Query: 61 PQEVWQPDLSTFNSAGGNDVSPFGETYHIAS------SDGLISWVPPCQFQVYCHLDLTY 114
++W PD TF N+ + T + +DG + + + C + L Y
Sbjct: 82 GHQIWMPD--TFFP---NEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVLSCPMYLQY 136
Query: 115 WPFDSQVCELILGSWVYDGNNIDFL 139
+P D Q C + L S+ Y +I++L
Sbjct: 137 YPMDVQQCSIDLASYAYTTKDIEYL 161
>pdb|4ALX|A Chain A, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|B Chain B, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|C Chain C, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|D Chain D, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|E Chain E, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|F Chain F, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|G Chain G, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|H Chain H, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|I Chain I, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|J Chain J, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
Length = 229
Score = 32.0 bits (71), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 39 WYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISW 98
W D L W+ D Q+ + +W PDL+ +N+ +V SDG + +
Sbjct: 77 WSDRTLAWNSSHSPD--QVSVPISSLWVPDLAAYNAISKPEV--LTPQLARVVSDGEVLY 132
Query: 99 VPPCQFQVYCHLDLTYWPFDS-QVCELILGSWVYDGNNI 136
+P + + C D++ +S C + +GSW + I
Sbjct: 133 MPSIRQRFSC--DVSGVDTESGATCRIKIGSWTHHSREI 169
>pdb|1UV6|A Chain A, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|B Chain B, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|C Chain C, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|D Chain D, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|E Chain E, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|F Chain F, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|G Chain G, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|H Chain H, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|I Chain I, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|J Chain J, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1YI5|A Chain A, Crystal Structure Of The A-Cobratoxin-Achbp Complex
pdb|1YI5|B Chain B, Crystal Structure Of The A-Cobratoxin-Achbp Complex
pdb|1YI5|C Chain C, Crystal Structure Of The A-Cobratoxin-Achbp Complex
pdb|1YI5|D Chain D, Crystal Structure Of The A-Cobratoxin-Achbp Complex
pdb|1YI5|E Chain E, Crystal Structure Of The A-Cobratoxin-Achbp Complex
pdb|3U8J|B Chain B, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|A Chain A, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|C Chain C, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|D Chain D, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|E Chain E, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|F Chain F, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|G Chain G, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|J Chain J, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|I Chain I, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|H Chain H, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8K|A Chain A, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|B Chain B, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|C Chain C, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|D Chain D, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|E Chain E, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|F Chain F, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|G Chain G, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|H Chain H, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|I Chain I, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|J Chain J, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|K Chain K, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|L Chain L, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|M Chain M, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|N Chain N, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|O Chain O, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|P Chain P, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|Q Chain Q, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|R Chain R, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|S Chain S, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|T Chain T, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|A Chain A, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|B Chain B, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|C Chain C, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|D Chain D, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|E Chain E, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|F Chain F, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|G Chain G, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|H Chain H, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|I Chain I, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|J Chain J, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|A Chain A, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|B Chain B, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|C Chain C, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|D Chain D, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|E Chain E, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|F Chain F, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|G Chain G, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|H Chain H, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|I Chain I, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|J Chain J, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|K Chain K, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|L Chain L, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|M Chain M, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|N Chain N, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|O Chain O, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|P Chain P, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|Q Chain Q, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|R Chain R, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|S Chain S, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|T Chain T, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8N|A Chain A, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|B Chain B, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|C Chain C, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|D Chain D, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|E Chain E, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|F Chain F, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|G Chain G, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|H Chain H, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|I Chain I, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|J Chain J, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|K Chain K, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|L Chain L, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|M Chain M, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|N Chain N, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|O Chain O, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|P Chain P, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|Q Chain Q, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|R Chain R, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|S Chain S, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|T Chain T, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3ZDG|A Chain A, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|B Chain B, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|C Chain C, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|D Chain D, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|E Chain E, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|F Chain F, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|G Chain G, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|H Chain H, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|I Chain I, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|J Chain J, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|K Chain K, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|L Chain L, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|M Chain M, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|N Chain N, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|O Chain O, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|P Chain P, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|Q Chain Q, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|R Chain R, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|S Chain S, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|T Chain T, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDH|A Chain A, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|B Chain B, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|C Chain C, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|D Chain D, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|E Chain E, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|F Chain F, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|G Chain G, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|H Chain H, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|I Chain I, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|J Chain J, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
Length = 210
Score = 32.0 bits (71), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 39 WYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISW 98
W D L W+ D Q+ + +W PDL+ +N+ +V SDG + +
Sbjct: 58 WSDRTLAWNSSHSPD--QVSVPISSLWVPDLAAYNAISKPEV--LTPQLARVVSDGEVLY 113
Query: 99 VPPCQFQVYCHLDLTYWPFDS-QVCELILGSWVYDGNNI 136
+P + + C D++ +S C + +GSW + I
Sbjct: 114 MPSIRQRFSC--DVSGVDTESGATCRIKIGSWTHHSREI 150
>pdb|1UW6|A Chain A, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|B Chain B, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|C Chain C, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|D Chain D, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|E Chain E, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|F Chain F, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|G Chain G, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|H Chain H, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|I Chain I, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|J Chain J, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|K Chain K, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|L Chain L, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|M Chain M, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|N Chain N, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|O Chain O, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|P Chain P, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|Q Chain Q, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|R Chain R, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|S Chain S, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|T Chain T, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
Length = 211
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 39 WYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISW 98
W D L W+ D Q+ + +W PDL+ +N+ +V SDG + +
Sbjct: 59 WSDRTLAWNSSHSPD--QVSVPISSLWVPDLAAYNAISKPEV--LTPQLARVVSDGEVLY 114
Query: 99 VPPCQFQVYCHLDLTYWPFDS-QVCELILGSWVYDGNNI 136
+P + + C D++ +S C + +GSW + I
Sbjct: 115 MPSIRQRFSC--DVSGVDTESGATCRIKIGSWTHHSREI 151
>pdb|1UX2|A Chain A, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|B Chain B, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|C Chain C, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|D Chain D, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|E Chain E, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|F Chain F, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|G Chain G, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|H Chain H, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|I Chain I, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|J Chain J, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
Length = 212
Score = 32.0 bits (71), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 39 WYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISW 98
W D L W+ D Q+ + +W PDL+ +N+ +V SDG + +
Sbjct: 60 WSDRTLAWNSSHSPD--QVSVPISSLWVPDLAAYNAISKPEV--LTPQLARVVSDGEVLY 115
Query: 99 VPPCQFQVYCHLDLTYWPFDS-QVCELILGSWVYDGNNI 136
+P + + C D++ +S C + +GSW + I
Sbjct: 116 MPSIRQRFSC--DVSGVDTESGATCRIKIGSWTHHSREI 152
>pdb|1I9B|A Chain A, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1I9B|B Chain B, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1I9B|C Chain C, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1I9B|D Chain D, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1I9B|E Chain E, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
Length = 217
Score = 31.6 bits (70), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 43/99 (43%), Gaps = 7/99 (7%)
Query: 39 WYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISW 98
W D L W+ D Q+ + +W PDL+ +N+ +V SDG + +
Sbjct: 65 WSDRTLAWNSSHSPD--QVSVPISSLWVPDLAAYNAISKPEV--LTPQLARVVSDGEVLY 120
Query: 99 VPPCQFQVYCHLDLTYWPFDS-QVCELILGSWVYDGNNI 136
+P + + C D++ +S C + +GSW + I
Sbjct: 121 MPSIRQRFSC--DVSGVDTESGATCRIKIGSWTHHSREI 157
>pdb|4AOE|A Chain A, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2
(Bgachbp2)
pdb|4AOE|B Chain B, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2
(Bgachbp2)
pdb|4AOE|C Chain C, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2
(Bgachbp2)
pdb|4AOE|D Chain D, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2
(Bgachbp2)
pdb|4AOE|E Chain E, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2
(Bgachbp2)
Length = 205
Score = 31.6 bits (70), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 6/114 (5%)
Query: 39 WYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPFGETYHIASSDGLISW 98
W D L W + ++ L + +W P + +NS G + + DG +++
Sbjct: 60 WKDRSLSWS-NECTTFNELTLPSKYIWLPHIEVYNSIGKPGIH--SDQLVRVYKDGTVTF 116
Query: 99 VPPCQFQVYCHLDLTYWPFDSQVCELILGSWVYDGNNIDFLACPSRSMPLIRWA 152
VP + C L+ C L G W YD D + S+ + L +A
Sbjct: 117 VPQYTIRFSCALE-NVTTEQGAACTLKFGPWTYDVR--DLVLDESQQVDLTTYA 167
>pdb|2C5W|B Chain B, Penicillin-Binding Protein 1a (Pbp-1a) Acyl-Enzyme Complex
(Cefotaxime) From Streptococcus Pneumoniae
Length = 385
Score = 30.4 bits (67), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 13 HPVHRCTQTSLHSIEKKVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTF 72
+ V+ T T +H D+ N+ PV WD +G+I Y Q P + T
Sbjct: 119 YGVYESTATIVH------DEPYNYPGTNTPVYNWDRGYFGNITLQYALQQSRNVPAVETL 172
Query: 73 NSAGGNDVSPF 83
N G N F
Sbjct: 173 NKVGLNRAKTF 183
>pdb|2C6W|B Chain B, Penicillin-Binding Protein 1a (Pbp-1a) From Streptococcus
Pneumoniae
Length = 384
Score = 29.6 bits (65), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 13 HPVHRCTQTSLHSIEKKVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTF 72
+ V+ T T +H D+ N+ PV WD +G+I Y Q P + T
Sbjct: 118 YGVYDSTATIVH------DEPYNYPGTNTPVYNWDRGYFGNITLQYALQQSRNVPAVETL 171
Query: 73 NSAGGNDVSPF 83
N G N F
Sbjct: 172 NKVGLNRAKTF 182
>pdb|2ZC5|B Chain B, Penicillin-Binding Protein 1a (Pbp 1a) Acyl-Enzyme Complex
(Biapenem) From Streptococcus Pneumoniae
pdb|2ZC5|D Chain D, Penicillin-Binding Protein 1a (Pbp 1a) Acyl-Enzyme Complex
(Biapenem) From Streptococcus Pneumoniae
pdb|2ZC6|B Chain B, Penicillin-Binding Protein 1a (Pbp 1a) Acyl-Enzyme Complex
(Tebipenem) From Streptococcus Pneumoniae
pdb|2ZC6|D Chain D, Penicillin-Binding Protein 1a (Pbp 1a) Acyl-Enzyme Complex
(Tebipenem) From Streptococcus Pneumoniae
Length = 390
Score = 29.6 bits (65), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 6/71 (8%)
Query: 13 HPVHRCTQTSLHSIEKKVDQTLNFKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTF 72
+ V+ T T +H D+ N+ PV WD +G+I Y Q P + T
Sbjct: 121 YGVYDSTATIVH------DEPYNYPGTNTPVYNWDRGYFGNITLQYALQQSRNVPAVETL 174
Query: 73 NSAGGNDVSPF 83
N G N F
Sbjct: 175 NKVGLNRAKTF 185
>pdb|4DJH|A Chain A, Structure Of The Human Kappa Opioid Receptor In Complex
With Jdtic
pdb|4DJH|B Chain B, Structure Of The Human Kappa Opioid Receptor In Complex
With Jdtic
Length = 480
Score = 28.9 bits (63), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 23/40 (57%), Gaps = 3/40 (7%)
Query: 87 YHIASSDGLISWVPPCQFQVYCHLDLTYWPFDSQVCELIL 126
+++A +D L++ P Q VY + WPF +C+++L
Sbjct: 62 FNLALADALVTTTMPFQSTVYL---MNSWPFGDVLCKIVL 98
>pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein)
Synthase Ii From Thermus Thermophilus Hb8
pdb|1J3N|B Chain B, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein)
Synthase Ii From Thermus Thermophilus Hb8
Length = 408
Score = 27.3 bits (59), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 46 WDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSPF 83
DP++ G + + E W+ F G N +SPF
Sbjct: 93 LDPERVGTLVGTGIGGMETWEAQSRVFLERGPNRISPF 130
>pdb|1QH4|A Chain A, Crystal Structure Of Chicken Brain-Type Creatine Kinase At
1.41 Angstrom Resolution
pdb|1QH4|B Chain B, Crystal Structure Of Chicken Brain-Type Creatine Kinase At
1.41 Angstrom Resolution
pdb|1QH4|C Chain C, Crystal Structure Of Chicken Brain-Type Creatine Kinase At
1.41 Angstrom Resolution
pdb|1QH4|D Chain D, Crystal Structure Of Chicken Brain-Type Creatine Kinase At
1.41 Angstrom Resolution
Length = 380
Score = 26.9 bits (58), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 26/47 (55%), Gaps = 8/47 (17%)
Query: 36 FKKWYDPVLQWDPKKYGDIKQIYLAPQEVWQPDLSTFNSAGGNDVSP 82
FK+ +DPV++ ++G K P + + DL+ N GG+D+ P
Sbjct: 84 FKELFDPVIE---DRHGGYK-----PTDEHKTDLNADNLQGGDDLDP 122
>pdb|3EI8|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI8|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With Ll-Dap: External Aldimine Form
pdb|3EI9|A Chain A, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EI9|B Chain B, Crystal Structure Of K270n Variant Of Ll-diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-glu: External Aldimine Form
pdb|3EIB|A Chain A, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
pdb|3EIB|B Chain B, Crystal Structure Of K270n Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana
Length = 432
Score = 26.6 bits (57), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 47 DPKKYGDIKQIYLAPQEVWQPDLST 71
D +KYG+I+ + P+ + PDLST
Sbjct: 171 DVQKYGNIEYMRCTPENGFFPDLST 195
>pdb|2Z1Z|A Chain A, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|2Z1Z|B Chain B, Crystal Structure Of Ll-diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With L-malate Ion
pdb|3EI5|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI5|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Glu: An
External Aldimine Mimic
pdb|3EI6|A Chain A, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI6|B Chain B, Crystal Structure Of Ll-Diaminopimelate Aminotransferase
From Arabidopsis Thaliana Complexed With Plp-Dap: An
External Aldimine Mimic
pdb|3EI7|A Chain A, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
pdb|3EI7|B Chain B, Crystal Structure Of Apo-Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana (No Plp)
Length = 432
Score = 26.6 bits (57), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 47 DPKKYGDIKQIYLAPQEVWQPDLST 71
D +KYG+I+ + P+ + PDLST
Sbjct: 171 DVQKYGNIEYMRCTPENGFFPDLST 195
>pdb|3EIA|A Chain A, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
pdb|3EIA|B Chain B, Crystal Structure Of K270q Variant Of Ll-Diaminopimelate
Aminotransferase From Arabidopsis Thaliana Complexed
With L-Glu: External Aldimine Form
Length = 432
Score = 26.6 bits (57), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 17/25 (68%)
Query: 47 DPKKYGDIKQIYLAPQEVWQPDLST 71
D +KYG+I+ + P+ + PDLST
Sbjct: 171 DVQKYGNIEYMRCTPENGFFPDLST 195
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.137 0.469
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,541,246
Number of Sequences: 62578
Number of extensions: 233491
Number of successful extensions: 446
Number of sequences better than 100.0: 70
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 362
Number of HSP's gapped (non-prelim): 70
length of query: 160
length of database: 14,973,337
effective HSP length: 91
effective length of query: 69
effective length of database: 9,278,739
effective search space: 640232991
effective search space used: 640232991
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)