BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1413
(408 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf
Whitefly
Length = 352
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 147/208 (70%), Gaps = 10/208 (4%)
Query: 206 NYLLEDTL---HAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF 262
+++++D + H G +K + DRVA+EPGVPCR C +CKEG+YNLC +
Sbjct: 55 DFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLT 114
Query: 263 FCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLI 322
FCATPPD GNL+RYY HAADFCHKLPD+VSLEEGALLEPLSVGVHACRRAGV LG+ VL+
Sbjct: 115 FCATPPDDGNLARYYVHAADFCHKLPDNVSLEEGALLEPLSVGVHACRRAGVQLGTTVLV 174
Query: 323 TGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHII 382
GAGPIGLV++L A+A GA VV T +L+ AK GAD T+++D +E + II
Sbjct: 175 IGAGPIGLVSVLAAKAYGAF-VVCTARSPRRLEVAKNCGADVTLVVD---PAKEEESSII 230
Query: 383 ELLQ---GEQPDKTIDCSGIESTIKLGM 407
E ++ G+ P+ TIDCSG E I +G+
Sbjct: 231 ERIRSAIGDLPNVTIDCSGNEKCITIGI 258
Score = 112 bits (281), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 54/92 (58%), Positives = 68/92 (73%)
Query: 142 LKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKK 201
+ TR GG L++VG GSQ V +PLV +EIDI+ VFRY NDYPIAL MVASG+ +VK+
Sbjct: 258 INITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGRCNVKQ 317
Query: 202 LITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233
L+TH++ LE T+ AFE A+ A N IKVMI C
Sbjct: 318 LVTHSFKLEQTVDAFEAARKKADNTIKVMISC 349
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 51/89 (57%), Positives = 62/89 (69%), Gaps = 6/89 (6%)
Query: 65 LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIV 124
LS +L ++ LR EQ+PI +P + EVLL+M VGICGSDVHY HG+I DF + DPM++
Sbjct: 6 LSAVLYKQNDLRL-EQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVI 64
Query: 125 GHEASGIVSKVGAKVKHLK-----ATRPG 148
GHEASG V KVG VKHLK A PG
Sbjct: 65 GHEASGTVVKVGKNVKHLKKGDRVAVEPG 93
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP 58
M VGICGSDVHY HG+I DF + DPM++GHEASG V KVG VKHLK ++ P
Sbjct: 35 MAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGDRVAVEP 92
>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase
Length = 355
Score = 222 bits (565), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 144/184 (78%), Gaps = 2/184 (1%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
G+ ++ + DRVAI+PG P +T +CK GRYNL IFFCATPPD GNL R+Y+H A+F
Sbjct: 78 GSLVRHLQPGDRVAIQPGAPRQTDEFCKIGRYNLSPTIFFCATPPDDGNLCRFYKHNANF 137
Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
C+KLPD+V+ EEGAL+EPLSVG+HACRRAGVTLG+KVL+ GAGPIGLV LL A+A+GA++
Sbjct: 138 CYKLPDNVTFEEGALIEPLSVGIHACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGAAQ 197
Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
VV+TD+ +L AKE+GAD + I N S EEI+ +E L G +P+ TI+C+G+E++I
Sbjct: 198 VVVTDLSASRLSKAKEVGADFILEIS-NESPEEIAKK-VEGLLGSKPEVTIECTGVETSI 255
Query: 404 KLGM 407
+ G+
Sbjct: 256 QAGI 259
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 74/108 (68%), Gaps = 5/108 (4%)
Query: 127 EASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYP 186
E +G+ + + A + AT GG LV+VG GS+ +PLV T+E+DI+GVFRY N +P
Sbjct: 247 ECTGVETSIQAGIY---ATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYCNTWP 303
Query: 187 IALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234
+A++M+AS V+VK L+TH + LE L AFET+K G G +KVMI CD
Sbjct: 304 MAISMLASKSVNVKPLVTHRFPLEKALEAFETSKKGLG--LKVMIKCD 349
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 55/75 (73%), Gaps = 5/75 (6%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
E PI +P +EVLL+MH VGICGSDVHY HG+IGDF + PM++GHEASG V KVG+
Sbjct: 21 ENYPIPEPGPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSL 80
Query: 139 VKHLK-----ATRPG 148
V+HL+ A +PG
Sbjct: 81 VRHLQPGDRVAIQPG 95
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP 58
MH VGICGSDVHY HG+IGDF + PM++GHEASG V KVG+ V+HL+ ++ P
Sbjct: 37 MHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGDRVAIQP 94
>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|B Chain B, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|C Chain C, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL7|D Chain D, Human Sorbitol Dehydrogenase (Apo)
pdb|1PL8|A Chain A, Human SdhNAD+ COMPLEX
pdb|1PL8|B Chain B, Human SdhNAD+ COMPLEX
pdb|1PL8|C Chain C, Human SdhNAD+ COMPLEX
pdb|1PL8|D Chain D, Human SdhNAD+ COMPLEX
Length = 356
Score = 212 bits (540), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 139/184 (75%), Gaps = 2/184 (1%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
G+++K + DRVAIEPG P +CK GRYNL IFFCATPPD GNL R+Y+H A F
Sbjct: 79 GSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF 138
Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
C+KLPD+V+ EEGAL+EPLSVG+HACRR GVTLG KVL+ GAGPIG+VTLL A+A+GA++
Sbjct: 139 CYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQ 198
Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
VV+TD+ +L AKE+GAD + I + S +EI+ +E G +P+ TI+C+G E++I
Sbjct: 199 VVVTDLSATRLSKAKEIGADLVLQISK-ESPQEIARK-VEGQLGCKPEVTIECTGAEASI 256
Query: 404 KLGM 407
+ G+
Sbjct: 257 QAGI 260
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Query: 144 ATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLI 203
ATR GG LV+VG GS+ +PL+ +E+DI+GVFRY N +P+A++M+AS V+VK L+
Sbjct: 262 ATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSVNVKPLV 321
Query: 204 THNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234
TH + LE L AFET K G G +K+M+ CD
Sbjct: 322 THRFPLEKALEAFETFKKGLG--LKIMLKCD 350
Score = 91.7 bits (226), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 50/65 (76%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
E PI +P +EVLL MH VGICGSDVHY +G+IG+F + PM++GHEASG V KVG+
Sbjct: 22 ENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSS 81
Query: 139 VKHLK 143
VKHLK
Sbjct: 82 VKHLK 86
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 43/58 (74%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP 58
MH VGICGSDVHY +G+IG+F + PM++GHEASG V KVG+ VKHLK ++ P
Sbjct: 38 MHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGDRVAIEP 95
>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|B Chain B, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|C Chain C, Human SdhNADHINHIBITOR COMPLEX
pdb|1PL6|D Chain D, Human SdhNADHINHIBITOR COMPLEX
Length = 356
Score = 210 bits (534), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 104/184 (56%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
G+++K + DRVAIEPG P +CK GRYNL IFFCATPPD GNL R+Y+H A F
Sbjct: 79 GSSVKHLKPGDRVAIEPGAPRENDEFCKXGRYNLSPSIFFCATPPDDGNLCRFYKHNAAF 138
Query: 284 CHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASR 343
C+KLPD+V+ EEGAL+EPLSVG+HACRR GVTLG KVL+ GAGPIG VTLL A+A GA++
Sbjct: 139 CYKLPDNVTFEEGALIEPLSVGIHACRRGGVTLGHKVLVCGAGPIGXVTLLVAKAXGAAQ 198
Query: 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
VV+TD+ +L AKE+GAD + I + S +EI+ +E G +P+ TI+C+G E++I
Sbjct: 199 VVVTDLSATRLSKAKEIGADLVLQISK-ESPQEIARK-VEGQLGCKPEVTIECTGAEASI 256
Query: 404 KLGM 407
+ G+
Sbjct: 257 QAGI 260
Score = 95.5 bits (236), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 63/91 (69%), Gaps = 2/91 (2%)
Query: 144 ATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLI 203
ATR GG LV+VG GS+ +PL+ +E+DI+GVFRY N +P+A++ +AS V+VK L+
Sbjct: 262 ATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVFRYCNTWPVAISXLASKSVNVKPLV 321
Query: 204 THNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234
TH + LE L AFET K G G +K+ + CD
Sbjct: 322 THRFPLEKALEAFETFKKGLG--LKIXLKCD 350
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 48/65 (73%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
E PI +P +EVLL H VGICGSDVHY +G+IG+F + P ++GHEASG V KVG+
Sbjct: 22 ENYPIPEPGPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEASGTVEKVGSS 81
Query: 139 VKHLK 143
VKHLK
Sbjct: 82 VKHLK 86
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 32/57 (56%), Positives = 41/57 (71%)
Query: 2 HCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP 58
H VGICGSDVHY +G+IG+F + P ++GHEASG V KVG+ VKHLK ++ P
Sbjct: 39 HSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEASGTVEKVGSSVKHLKPGDRVAIEP 95
>pdb|3M6I|A Chain A, L-Arabinitol 4-Dehydrogenase
pdb|3M6I|B Chain B, L-Arabinitol 4-Dehydrogenase
Length = 363
Score = 155 bits (393), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 84/175 (48%), Positives = 110/175 (62%), Gaps = 1/175 (0%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
DRVAIEP V C C C GRYN C ++ F +TPP G L RY H A +CHK+ ++S
Sbjct: 98 DRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHKI-GNMSY 156
Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
E GA+LEPLSV + +RAGV LG VLI GAGPIGL+T+L A+A GA +VITDI E +
Sbjct: 157 ENGAMLEPLSVALAGLQRAGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGR 216
Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGML 408
LK AKE+ + S EE + I+E G +P ++C+G+ES+I +
Sbjct: 217 LKFAKEICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIW 271
Score = 82.4 bits (202), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 124 VGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYAN 183
V E +G+ S + A + +K GG + ++G G +++IP + +E+D++ +RY N
Sbjct: 255 VALECTGVESSIAAAIWAVKF---GGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCN 311
Query: 184 DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232
+P A+ +V +G VD+ +L+TH + LED L AFETA AIKV I
Sbjct: 312 TWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQ 360
Score = 48.9 bits (115), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC 64
GICGSDVH+ HG IG + ++GHE++G V V VK +KV ++ P+
Sbjct: 51 GICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKVGDRVAIEPQVICNA 110
Query: 65 LSPILRRRFS 74
P L R++
Sbjct: 111 CEPCLTGRYN 120
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 84 EDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 143
E+ + EV + + GICGSDVH+ HG IG + ++GHE++G V V VK +K
Sbjct: 36 EELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIK 95
>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
pdb|4EJM|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase
(Target Psi-012003) From Sinorhizobium Meliloti 1021
Bound To Nadp
Length = 370
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 93/191 (48%), Gaps = 3/191 (1%)
Query: 214 HAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNL 273
H F AG+A++ + R+ +P + C C C+ GR NLCR + D G
Sbjct: 81 HEFCGIVVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRD-GGF 139
Query: 274 SRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTL 333
+ Y ++P + GA EPL+ +H +G+ GS V I G G IGL+T+
Sbjct: 140 AEYVLVPRKQAFEIPLTLDPVHGAFCEPLACCLHGVDLSGIKAGSTVAILGGGVIGLLTV 199
Query: 334 LTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393
AR GA+ V+++ K + A+E+GA ATV +E I+ + + G D
Sbjct: 200 QLARLAGATTVILSTRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGV--DVV 257
Query: 394 IDCSGIESTIK 404
I+C+G+ T+K
Sbjct: 258 IECAGVAETVK 268
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
I +P ++L+++ GICG+D H L G+F + P+ +GHE GIV + G+ V+ +
Sbjct: 42 IPEPGPDDLLVKVEACGICGTDRHLLH----GEFPSTPPVTLGHEFCGIVVEAGSAVRDI 97
Score = 35.4 bits (80), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 27/44 (61%), Gaps = 4/44 (9%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 48
GICG+D H L G+F + P+ +GHE GIV + G+ V+ +
Sbjct: 58 GICGTDRHLLH----GEFPSTPPVTLGHEFCGIVVEAGSAVRDI 97
>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
pdb|4A2C|B Chain B, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase
From Escherichia Coli
Length = 346
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/195 (31%), Positives = 94/195 (48%), Gaps = 7/195 (3%)
Query: 214 HAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNL 273
H F G+ + + D VA P +PC TC C +G Y+ C + F + D G
Sbjct: 59 HEFSGYIDAVGSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRD-GGF 117
Query: 274 SRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTL 333
+ Y LP + +E+GA +EP++VG+HA A V+I GAG IGL+ +
Sbjct: 118 AEYIVVKRKNVFALPTDMPIEDGAFIEPITVGLHAFHLAQGCENKNVIIIGAGTIGLLAI 177
Query: 334 LTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393
A ALGA V DI KL AK GA T +S E + + +L+ + ++
Sbjct: 178 QCAVALGAKSVTAIDISSEKLALAKSFGAMQTF-----NSSEMSAPQMQSVLRELRFNQL 232
Query: 394 I-DCSGIESTIKLGM 407
I + +G+ T++L +
Sbjct: 233 ILETAGVPQTVELAV 247
Score = 29.3 bits (64), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 4/53 (7%)
Query: 90 EVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
EV +++ G+CGSD+ + + P+ +GHE SG + VG+ V L
Sbjct: 27 EVRVKIASSGLCGSDLPRIFKNGAHYY----PITLGHEFSGYIDAVGSGVDDL 75
>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2DQ4|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase
pdb|2EJV|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
pdb|2EJV|B Chain B, Crystal Structure Of Threonine 3-Dehydrogenase Complexed
With Nad+
Length = 343
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 87/197 (44%), Gaps = 7/197 (3%)
Query: 212 TLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHG 271
T H F G ++ D V++E + C C C+ G Y++C D G
Sbjct: 61 TGHEFSGVVEAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRD-G 119
Query: 272 NLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLV 331
+ Y A+ P + E A+LEP VH G VLITGAGPIGL+
Sbjct: 120 GFAEYVVVPAENAWVNPKDLPFEVAAILEPFGNAVHTVYAGSGVSGKSVLITGAGPIGLM 179
Query: 332 TLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391
+ RA GA ++++D ++L A+ AD V + LEE ++ + G +
Sbjct: 180 AAMVVRASGAGPILVSDPNPYRLAFARPY-ADRLV-----NPLEEDLLEVVRRVTGSGVE 233
Query: 392 KTIDCSGIESTIKLGML 408
++ SG E+ I G++
Sbjct: 234 VLLEFSGNEAAIHQGLM 250
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 81 KPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK 140
+P+ +P E+L+ + ICG+D+H R+ P++ GHE SG+V VG V+
Sbjct: 18 RPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVR 77
Query: 141 H 141
Sbjct: 78 R 78
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/52 (32%), Positives = 27/52 (51%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDN 52
+ ICG+D+H R+ P++ GHE SG+V VG V+ +V +
Sbjct: 32 VEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 45/99 (45%), Gaps = 13/99 (13%)
Query: 140 KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVF-------RYANDYPIALAMV 192
+ L A PGG I+G S P+ + E+ +RG+ R + A+V
Sbjct: 247 QGLMALIPGGEARILGIPSD----PIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALV 302
Query: 193 ASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231
SG+VD+ L+TH L AF +G A+KV++
Sbjct: 303 YSGRVDLSPLLTHRLPLSRYREAF--GLLASGQAVKVIL 339
>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|B Chain B, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
pdb|2DFV|C Chain C, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus
Horikoshii
Length = 347
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
D V++E + C C C+ G+Y++C+ D G + Y A K P +
Sbjct: 86 DYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD-GVFAEYAVVPAQNIWKNPKSIPP 144
Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
E L EPL V AG G VLITGAGP+GL+ + A+A GA V++++ + +
Sbjct: 145 EYATLQEPLGNAVDTVL-AGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFR 203
Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
+ AK++GAD + N E++ + ++ G D ++ SG ++ G+
Sbjct: 204 RELAKKVGADYVI----NPFEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGL 253
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
+ P EVL+++ ICG+D+H + R+ P I GHE +G V ++G V+ +
Sbjct: 23 VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGI 82
Query: 143 K 143
+
Sbjct: 83 E 83
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 6 ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDN 52
ICG+D+H + R+ P I GHE +G V ++G V+ ++V +
Sbjct: 40 ICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 86
>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3
Length = 348
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 85/174 (48%), Gaps = 6/174 (3%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
D V++E + C C C+ G+Y++C+ D G + Y A K P +
Sbjct: 87 DYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTD-GVFAEYAVVPAQNIWKNPKSIPP 145
Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
E L EPL V AG G VLITGAGP+GL+ + A+A GA V++++ + +
Sbjct: 146 EYATLQEPLGNAVDTVL-AGPISGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFR 204
Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
+ AK++GAD + N E++ + ++ G D ++ SG ++ G+
Sbjct: 205 RELAKKVGADYVI----NPFEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQGL 254
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
+ P EVL+++ ICG+D+H + R+ P I GHE +G V ++G V+ +
Sbjct: 24 VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGI 83
Query: 143 K 143
+
Sbjct: 84 E 84
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 27/47 (57%)
Query: 6 ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDN 52
ICG+D+H + R+ P I GHE +G V ++G V+ ++V +
Sbjct: 41 ICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 87
>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|B Chain B, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|C Chain C, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
pdb|3GFB|D Chain D, L-Threonine Dehydrogenase (Tktdh) From The
Hyperthermophilic Archaeon Thermococcus Kodakaraensis
Length = 350
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 53/174 (30%), Positives = 84/174 (48%), Gaps = 6/174 (3%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
D +++E + C C CK RY++C+ D G + Y A K P +
Sbjct: 87 DYISVETHIVCGKCYACKHNRYHVCQNTKIFGVDMD-GVFAHYAIVPAKNAWKNPKDMPP 145
Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK 353
E AL EPL V AG G LITGAGP+GL+ + A+A GA V++++ E +
Sbjct: 146 EYAALQEPLGNAVDTVL-AGPIAGRSTLITGAGPLGLLGIAVAKASGAYPVIVSEPSEFR 204
Query: 354 LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407
K AK++GAD V N E+ ++++ G + ++ SG ++ G+
Sbjct: 205 RKLAKKVGADYVV----NPFEEDPVKFVMDITDGAGVEVFLEFSGAPKALEQGL 254
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
+ P EVL+++ ICG+D+H + R+ P I+GHE +G V +VG V+ L
Sbjct: 24 VPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDL 83
Query: 143 K 143
+
Sbjct: 84 Q 84
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 6 ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDN 52
ICG+D+H + R+ P I+GHE +G V +VG V+ L+V +
Sbjct: 41 ICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGD 87
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 142 LKATRPGGCLVIVGAGSQDVKIPLV-LTMTKEIDIRGV---FRYANDYPIALAMVASGKV 197
LKA PGG + ++G ++V I L + K +++ G+ + Y ++ +++ SGK+
Sbjct: 254 LKAVTPGGRVSLLGLFPREVTIDFNNLIIFKALEVHGITGRHLWETWYTVS-SLIQSGKL 312
Query: 198 DVKKLITHNYLLEDTL-HAFETAKTGAGNAIKVMIH 232
++ +ITH Y D AFE + G + H
Sbjct: 313 NLDPIITHKYKGFDKFEEAFELMRAGKTGKVVFFPH 348
>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
pdb|4ILK|B Chain B, Crystal Structure Of Short Chain Alcohol Dehydrogenase
(rspb) From E. Coli Cft073 (efi Target Efi-506413)
Complexed With Cofactor Nadh
Length = 359
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 52/192 (27%), Positives = 86/192 (44%), Gaps = 8/192 (4%)
Query: 214 HAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNL 273
H F G ++ +RVA++P V C C C G+ N+C + D G
Sbjct: 79 HEFFGVIDAVGEGVESARVGERVAVDPVVSCGHCYPCSIGKPNVCTTLAVLGVHAD-GGF 137
Query: 274 SRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTL 333
S Y A K+P+ V+ + ++EP ++ + T VL+ GAGPIGL +
Sbjct: 138 SEYAVVPAKNAWKIPEAVADQYAVMIEPFTIAANVTGHGQPTENDTVLVYGAGPIGLTIV 197
Query: 334 LTARAL-GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK 392
+ + V++ D ++ +L+ AKE GAD + N+S + E +G +P
Sbjct: 198 QVLKGVYNVKNVIVADRIDERLEKAKESGADWAI----NNSQTPLGESFAE--KGIKPTL 251
Query: 393 TIDCSGIESTIK 404
ID + S +K
Sbjct: 252 IIDAACHPSILK 263
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%), Gaps = 5/65 (7%)
Query: 80 QKPIEDPDDHEVLLEMHCVGICGSDVH-YLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
++ I P EV +++ GICGSD H Y H + P ++GHE G++ VG
Sbjct: 36 EREIPTPSAGEVRVKVKLAGICGSDSHIYRGHNPFAKY----PRVIGHEFFGVIDAVGEG 91
Query: 139 VKHLK 143
V+ +
Sbjct: 92 VESAR 96
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 5/55 (9%)
Query: 5 GICGSDVH-YLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP 58
GICGSD H Y H + P ++GHE G++ VG V+ +V + P
Sbjct: 55 GICGSDSHIYRGHNPFAKY----PRVIGHEFFGVIDAVGEGVESARVGERVAVDP 105
Score = 32.7 bits (73), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/74 (25%), Positives = 36/74 (48%), Gaps = 3/74 (4%)
Query: 147 PGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHN 206
P +V++G S+ ++ KE+ I AN +P+ + ++ G + +KLITH
Sbjct: 271 PAARIVLMGFSSEPSEVIQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIKPEKLITHT 330
Query: 207 YLLE---DTLHAFE 217
+ + D + FE
Sbjct: 331 FDFQHVADAISLFE 344
>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|B Chain B, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|C Chain C, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
pdb|1RJW|D Chain D, Crystal Structure Of Nad(+)-Dependent Alcohol
Dehydrogenase From Bacillus Stearothermophilus Strain
Lld-R
Length = 339
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 70/136 (51%), Gaps = 6/136 (4%)
Query: 234 DRVAIEPGV--PCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHV 291
DRV I P + C C YC G+ LC D G + Y R AAD+ K+PD++
Sbjct: 81 DRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-GGYAEYCRAAADYVVKIPDNL 138
Query: 292 SLEEGALLEPLSVGVH-ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
S EE A + V + A + G G V I G G +G V + A+A+G + VV DI
Sbjct: 139 SFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLN-VVAVDIG 197
Query: 351 EHKLKTAKEMGADATV 366
+ KL+ AKE+GAD V
Sbjct: 198 DEKLELAKELGADLVV 213
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 76 RFREQ---KPIEDP--DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASG 130
+F+E K +E P EVL+ + G+C +D+H HG + P+I GHE G
Sbjct: 8 QFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLH-AAHGDW-PVKPKLPLIPGHEGVG 65
Query: 131 IVSKVGAKVKHLK 143
IV +VG V HLK
Sbjct: 66 IVEEVGPGVTHLK 78
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC 64
G+C +D+H HG + P+I GHE GIV +VG V HLKV ++ +P + C
Sbjct: 36 GVCHTDLH-AAHGDW-PVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVG-IPWLYSAC 92
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 144 ATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRG-VFRYANDYPIALAMVASGKVDVKKL 202
+ R GG V+VG +++ IP+ T+ I I G + D AL A GKV K
Sbjct: 250 SIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV---KT 306
Query: 203 ITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDR 235
I LE F+ G N V+ D+
Sbjct: 307 IIEVQPLEKINEVFDRMLKGQINGRVVLTLEDK 339
>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|C Chain C, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|B Chain B, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
pdb|3PII|D Chain D, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase
With Substrate Analogue Butyramide
Length = 339
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 52/136 (38%), Positives = 69/136 (50%), Gaps = 6/136 (4%)
Query: 234 DRVAIEPGV--PCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHV 291
DRV I P + C C YC G+ LC D G + Y R AAD+ K+PD++
Sbjct: 81 DRVGI-PWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-GGYAEYCRAAADYVVKIPDNL 138
Query: 292 SLEEGALLEPLSVGVH-ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350
S EE A + V + A + G G V I G G G V + A+A+G + VV DI
Sbjct: 139 SFEEAAPIFCAGVTTYKALKVTGAKPGEWVAIYGIGGFGHVAVQYAKAMGLN-VVAVDIG 197
Query: 351 EHKLKTAKEMGADATV 366
+ KL+ AKE+GAD V
Sbjct: 198 DEKLELAKELGADLVV 213
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 7/73 (9%)
Query: 76 RFREQ---KPIEDP--DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASG 130
+F+E K +E P EVL+ + G+C +D+H HG + P+I GHE G
Sbjct: 8 QFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLH-AAHGDW-PVKPKLPLIPGHEGVG 65
Query: 131 IVSKVGAKVKHLK 143
IV +VG V HLK
Sbjct: 66 IVEEVGPGVTHLK 78
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC 64
G+C +D+H HG + P+I GHE GIV +VG V HLKV ++ +P + C
Sbjct: 36 GVCHTDLH-AAHGDW-PVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRVG-IPWLYSAC 92
Score = 28.1 bits (61), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 39/93 (41%), Gaps = 4/93 (4%)
Query: 144 ATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRG-VFRYANDYPIALAMVASGKVDVKKL 202
+ R GG V+VG +++ IP+ T+ I I G + D AL A GKV K
Sbjct: 250 SIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV---KT 306
Query: 203 ITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDR 235
I LE F+ G N V+ D+
Sbjct: 307 IIEVQPLEKINEVFDRMLKGQINGRVVLTLEDK 339
>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
pdb|2EIH|B Chain B, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase
Length = 343
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 80/187 (42%), Gaps = 12/187 (6%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF 283
G ++ D V I PG+ C C C G NLC + HG + Y
Sbjct: 73 GPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEH-RHGTYAEYVVLPEAN 131
Query: 284 CHKLPDHVSLEEGAL--LEPLSVGVHACRRAGVTLGSKVLITGAGP-IGLVTLLTARALG 340
P ++S EE A L L+ + GV G VL+ AG + + + A+ G
Sbjct: 132 LAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFG 191
Query: 341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG-- 398
A RV+ T E KL+ AK +GAD TV N++ + + L G+ DK +D +G
Sbjct: 192 A-RVIATAGSEDKLRRAKALGADETV----NYTHPDWPKEVRRLTGGKGADKVVDHTGAL 246
Query: 399 -IESTIK 404
E IK
Sbjct: 247 YFEGVIK 253
>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|B Chain B, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|C Chain C, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
pdb|3IP1|D Chain D, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From
Thermotoga Maritima
Length = 404
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 10/151 (6%)
Query: 236 VAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEE 295
V E + C C C EG N C + D G + Y + A + L + + E
Sbjct: 125 VCAEEXLWCGHCRPCAEGFPNHCENLNELGFNVD-GAFAEYVKVDAKYAWSLRELEGVYE 183
Query: 296 G-------ALLEPLSVGVHAC--RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVI 346
G +L+EP SV +A R G+ G V+I G GPIGL + + GAS+V++
Sbjct: 184 GDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVIL 243
Query: 347 TDILEHKLKTAKEMGADATVLIDRNHSLEEI 377
++ E + AKE+GAD + + + +E +
Sbjct: 244 SEPSEVRRNLAKELGADHVIDPTKENFVEAV 274
Score = 36.2 bits (82), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 14/72 (19%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVH--------YLTHGQIGDFRLSDPMIVGHEASGIVSK 134
IE P E+++++ GICGSDVH Y+ + + F P+ +GHE SG+V +
Sbjct: 52 IEKPT--EIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGF----PVTLGHEFSGVVVE 105
Query: 135 VGAKVKHLKATR 146
G + + + +
Sbjct: 106 AGPEAINRRTNK 117
Score = 31.6 bits (70), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 12/57 (21%)
Query: 5 GICGSDVH--------YLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQ 53
GICGSDVH Y+ + + F P+ +GHE SG+V + G + + + + +
Sbjct: 66 GICGSDVHXAQTDEEGYILYPGLTGF----PVTLGHEFSGVVVEAGPEAINRRTNKR 118
>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
pdb|1H2B|B Chain B, Crystal Structure Of The Alcohol Dehydrogenase From The
Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a
Resolution
Length = 359
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
D V + P V TC C+ G C + F D G + + R + KLP +S
Sbjct: 99 DPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNID-GGFAEFMRTSHRSVIKLPKDISR 157
Query: 294 EEGALLEPLS----VGVHACRRAGVTL--GSKVLITGAGPIGLVTLLTARALGASRVVIT 347
E+ + PL+ A ++A TL G+ V I G G +G + + + + + V+
Sbjct: 158 EKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIAL 217
Query: 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
D+ E KLK A+ +GAD V R+ ++EL +G + +D G ++T+
Sbjct: 218 DVKEEKLKLAERLGADHVVDARRDP-----VKQVMELTRGRGVNVAMDFVGSQATV 268
>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
pdb|4EEZ|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase Variant Re1
Length = 348
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 67/135 (49%), Gaps = 2/135 (1%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS 303
C C YC G CR++ D G ++ AD+ K+PD + E + +
Sbjct: 91 CGHCEYCVSGNETFCREVKNAGYSVD-GGMAEEAIVVADYAVKVPDGLDPIEASSITCAG 149
Query: 304 VGVH-ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGA 362
V + A + +GV G +I GAG +G + + A+ + ++V+ DI + KL AK++GA
Sbjct: 150 VTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA 209
Query: 363 DATVLIDRNHSLEEI 377
D T+ + ++EI
Sbjct: 210 DVTINSGDVNPVDEI 224
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 89 HEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 143
+E LL+M G+C +D+H GDF ++GHE GIV ++GA V L+
Sbjct: 27 NEALLDMEYCGVCHTDLHVAA----GDFGNKAGTVLGHEGIGIVKEIGADVSSLQ 77
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M G+C +D+H GDF ++GHE GIV ++GA V L+V ++ F
Sbjct: 33 MEYCGVCHTDLHVAA----GDFGNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFF 88
Query: 61 R 61
Sbjct: 89 E 89
>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
pdb|4EEX|B Chain B, Crystal Structure Of Lactococcus Lactis Alcohol
Dehydrogenase
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 2/135 (1%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS 303
C C YC G CR++ D G ++ AD+ K+PD + E + +
Sbjct: 91 CGHCEYCVSGNETFCREVKNAGYSVD-GGMAEEAIVVADYAVKVPDGLDPIEASSITCAG 149
Query: 304 VGVH-ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGA 362
V + A + +GV G +I GAG +G + + A+ + ++V+ DI + KL AK++GA
Sbjct: 150 VTTYKAIKVSGVKPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAKKIGA 209
Query: 363 DATVLIDRNHSLEEI 377
D + + ++EI
Sbjct: 210 DVIINSGDVNPVDEI 224
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
Query: 89 HEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 143
+E LL+M G+C +D+H GD+ ++GHE GIV ++GA V L+
Sbjct: 27 NEALLDMEYCGVCHTDLHVAA----GDYGNKAGTVLGHEGIGIVKEIGADVSSLQ 77
Score = 35.0 bits (79), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 30/61 (49%), Gaps = 4/61 (6%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M G+C +D+H GD+ ++GHE GIV ++GA V L+V ++ F
Sbjct: 33 MEYCGVCHTDLHVAA----GDYGNKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWFF 88
Query: 61 R 61
Sbjct: 89 E 89
>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|B Chain B, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|C Chain C, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
pdb|3COS|D Chain D, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase
(Adh4) In Complex With Nad And Zn
Length = 381
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 81/191 (42%), Gaps = 31/191 (16%)
Query: 244 CRTCTYCKEGRYNLCRQI-------------------FFCATPPDH-----GNLSRYYRH 279
CR C +C NLC +I F C P + S+Y
Sbjct: 100 CRKCKFCLSPLTNLCGKISNLKSPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFSQYTVV 159
Query: 280 AADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTAR 337
+ K+ D +LE LL S G A A VT GS + G G +GL ++ +
Sbjct: 160 SDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSAVMGCK 219
Query: 338 ALGASRVVITDILEHKLKTAKEMGA-DATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396
A GASR++ DI K AK +GA D D + ++E+ IIEL +G D +DC
Sbjct: 220 AAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEV---IIELTKGGV-DFALDC 275
Query: 397 SGIESTIKLGM 407
+G T+K +
Sbjct: 276 AGGSETMKAAL 286
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 3/65 (4%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
E+ + P HEV +++ +C +D + G L+ P+IVGHEA+GIV +G
Sbjct: 26 EEVEVAPPKAHEVRIQIIATSLCHTDATVIDSKFEG---LAFPVIVGHEAAGIVESIGPG 82
Query: 139 VKHLK 143
V ++K
Sbjct: 83 VTNVK 87
Score = 35.0 bits (79), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
Query: 24 LSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVPEFR--NVCLSPI 68
L+ P+IVGHEA+GIV +G V ++K ++ + P R CLSP+
Sbjct: 62 LAFPVIVGHEAAGIVESIGPGVTNVKPGDKVIPLYAPLCRKCKFCLSPL 110
>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|B Chain B, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|C Chain C, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
pdb|1VJ0|D Chain D, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From
Thermotoga Maritima At 2.00 A Resolution
Length = 380
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 50/82 (60%), Gaps = 1/82 (1%)
Query: 317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEE 376
G V+I GAGP+GL ++ AR+LGA V++ ++LK A+E+GAD T L R S+EE
Sbjct: 196 GKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAEEIGADLT-LNRRETSVEE 254
Query: 377 ISTHIIELLQGEQPDKTIDCSG 398
I+++ G D ++ +G
Sbjct: 255 RRKAIMDITHGRGADFILEATG 276
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
I D +L+E+ G+CGSDVH + G+ D R+ P+I+GHE +G V +V + + L
Sbjct: 37 ISDIPRGSILVEILSAGVCGSDVH-MFRGE--DPRVPLPIILGHEGAGRVVEVNGEKRDL 93
Query: 143 KAT--RPGGCLV 152
+PG +V
Sbjct: 94 NGELLKPGDLIV 105
Score = 35.0 bits (79), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 3/45 (6%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 49
G+CGSDVH + G+ D R+ P+I+GHE +G V +V + + L
Sbjct: 53 GVCGSDVH-MFRGE--DPRVPLPIILGHEGAGRVVEVNGEKRDLN 94
>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|B Chain B, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|C Chain C, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|2XAA|D Chain D, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm
44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol
pdb|3JV7|A Chain A, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|B Chain B, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|C Chain C, Structure Of Adh-A From Rhodococcus Ruber
pdb|3JV7|D Chain D, Structure Of Adh-A From Rhodococcus Ruber
Length = 345
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 76/181 (41%), Gaps = 20/181 (11%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLC-RQIFFCATPP---DHGNLSRYY-----RHAADFC 284
D VA+ C C C GR N C R TPP G+++ Y RH
Sbjct: 82 DAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPIG 141
Query: 285 HKLPDHVSLEEGALLEPLSVGVHACRRAGVTLG--SKVLITGAGPIGLVTLLTARALGAS 342
P + A L P HA R LG S ++ G G +G V + RA+ A+
Sbjct: 142 DLDPVAAAPLTDAGLTPY----HAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAA 197
Query: 343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402
RV+ D+ + +L A+E+GADA V S + I EL G+ D G +ST
Sbjct: 198 RVIAVDLDDDRLALAREVGADAAV-----KSGAGAADAIRELTGGQGATAVFDFVGAQST 252
Query: 403 I 403
I
Sbjct: 253 I 253
Score = 33.5 bits (75), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%), Gaps = 1/58 (1%)
Query: 82 PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKV 139
P P E+LL++ G+C SD+ ++ + P+ +GHE G V+++G V
Sbjct: 19 PTPTPGPGEILLKVTAAGLCHSDI-FVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGV 75
>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
pdb|2EER|B Chain B, Structural Study Of Project Id St2577 From Sulfolobus
Tokodaii Strain7
Length = 347
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/173 (24%), Positives = 74/173 (42%), Gaps = 5/173 (2%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
D VA+ P C YC+ G +LC + D + +KL ++
Sbjct: 88 DLVAVNPWEGEGNCYYCRIGEEHLCDSPRWLGINYDGAYAEYVLVPHYKYLYKLRRLSAV 147
Query: 294 EEGALLEPLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH 352
E L A R+A + +++ GA G +G + + A+A+ + ++ D+ E
Sbjct: 148 EAAPLTCSGVTTYRAVRKASLDPSKTLVVIGAGGGLGTMAIQIAKAVSGATIIGVDVREE 207
Query: 353 KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
L+ AK GAD + N S ++ + I + QG+ D ID + E T+ +
Sbjct: 208 ALEAAKRAGADYVI----NASSQDPVSEIRRITQGKGADAVIDLNNSEKTLSI 256
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 7/67 (10%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD------PMIVGHEASGIV 132
E PI P +VL+++ G+C SDVH + G+ G+ R+ + P+ +GHE +G +
Sbjct: 16 EDIPIPKPKGSQVLIKIEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGHEIAGRI 74
Query: 133 SKVGAKV 139
+VG +V
Sbjct: 75 EEVGDEV 81
Score = 34.3 bits (77), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSD------PMIVGHEASGIVSKVGAKV 45
+ G+C SDVH + G+ G+ R+ + P+ +GHE +G + +VG +V
Sbjct: 32 IEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEV 81
>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From
Acinetobacter Calcoaceticus
Length = 371
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 63/146 (43%), Gaps = 30/146 (20%)
Query: 244 CRTCTYCKEGRYNLCRQIF---FCATPP---------DHGNLSRYYRHAADFCH------ 285
C CT C G C + F F D G ++ ++ + F
Sbjct: 94 CGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRE 153
Query: 286 ----KLPDHVSLEEGALLEPLSVGVH----ACRRA-GVTLGSKVLITGAGPIGLVTLLTA 336
K+ V +E LL PL G+ AC A VT S + GAG +GL LL A
Sbjct: 154 NNTVKVTKDVPIE---LLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAA 210
Query: 337 RALGASRVVITDILEHKLKTAKEMGA 362
+ GAS ++ DI+E +L+ AK++GA
Sbjct: 211 KVCGASIIIAVDIVESRLELAKQLGA 236
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142
I P EVL+++ G+C +D+ + Q + + P ++GHE SGI+ +G V L
Sbjct: 26 IRQPQGDEVLVKVVATGMCHTDL--IVRDQ--KYPVPLPAVLGHEGSGIIEAIGPNVTEL 81
Query: 143 K 143
+
Sbjct: 82 Q 82
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 55/149 (36%), Gaps = 24/149 (16%)
Query: 27 PMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCL-----SPILRRRFSLRFREQK 81
P ++GHE SGI+ +G V L+V + + C +P F F
Sbjct: 60 PAVLGHEGSGIIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEF---FGRNF 116
Query: 82 PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD-----------PM-IVGHEAS 129
D + + L H G+ H+ + LS P+ ++G
Sbjct: 117 SGADSEGNHALC-THDQGVVND--HFFAQSSFATYALSRENNTVKVTKDVPIELLGPLGC 173
Query: 130 GIVSKVGAKVKHLKATRPGGCLVIVGAGS 158
GI + GA + LK T P V GAG+
Sbjct: 174 GIQTGAGACINALKVT-PASSFVTWGAGA 201
>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1HSO|B Chain B, Human Alpha Alcohol Dehydrogenase (Adh1a)
pdb|1U3T|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
pdb|1U3T|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Alpha-
Alpha Isoform Complexed With N-Cyclopentyl-N-
Cyclobutylformamide Determined To 2.5 Angstrom
Resolution
Length = 374
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
L++ FS+ E P P HEV ++M VGICG+D H ++ G P+I+GHEA
Sbjct: 17 LKKPFSIEEVEVAP---PKAHEVRIKMVAVGICGTDDHVVS----GTMVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
+GIV VG V +K
Sbjct: 70 AGIVESVGEGVTTVK 84
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLCRQI---------------FFCATPPDH-----GNLSRYYRHAADF 283
C C CK N C + F C P H S+Y +
Sbjct: 97 CGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKPIHHFLGISTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
K+ LE+ L+ S G A A VT GS + G G +GL ++ +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAIMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
+R++ DI + K AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 4/49 (8%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 49
M VGICG+D H ++ G P+I+GHEA+GIV VG V +K
Sbjct: 40 MVAVGICGTDDHVVS----GTMVTPLPVILGHEAAGIVESVGEGVTTVK 84
>pdb|3FPC|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
pdb|3FPC|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-294 Of T. Brockii Adh By
E. Histolytica Adh
Length = 352
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
LP + LE ++ + ++ G H A + LG V + G GP+GL+++ A LGA R+
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIF 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
+H A E GA + N+ +I I++ G+ DK + G
Sbjct: 196 AVGSRKHCCDIALEYGATDII----NYKNGDIVEQILKATDGKGVDKVVIAGG 244
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 78 REQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGA 137
++KP P D ++ V C SD+H + G IG+ MI+GHEA G V +VG+
Sbjct: 16 EKEKPAPGPFD--AIVRPLAVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGS 70
Query: 138 KVKHLKATRPGGCLVI 153
+VK K PG +V+
Sbjct: 71 EVKDFK---PGDRVVV 83
Score = 36.6 bits (83), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 6/62 (9%)
Query: 3 CVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT---RFVPE 59
V C SD+H + G IG+ MI+GHEA G V +VG++VK K ++ P+
Sbjct: 33 AVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPD 89
Query: 60 FR 61
+R
Sbjct: 90 WR 91
>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDZ|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 44/75 (58%), Gaps = 7/75 (9%)
Query: 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
+++ FS+ E P P +EV ++M VGICG+D H ++ G+ P+I+GHEA
Sbjct: 17 VKKPFSIEDVEVAP---PKAYEVRIKMVAVGICGTDDHVVS----GNLVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
+GIV VG V +K
Sbjct: 70 AGIVESVGEGVTTVK 84
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLC---------------RQIFFCATPPDH-----GNLSRYYRHAADF 283
C C CK N C + F C P H S+Y +
Sbjct: 97 CGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
K+ LE+ L+ S G A A VT GS + G G +GL ++ +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
+R++ DI + K AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M VGICG+D H ++ G+ P+I+GHEA+GIV VG V +K + + +P F
Sbjct: 40 MVAVGICGTDDHVVS----GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense
pdb|1HT0|B Chain B, Human Gamma-2 Alcohol Dehydrogense
pdb|1U3W|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
pdb|1U3W|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Gamma-2-
Gamma-2 Isoform Complexed With N-1-Methylheptylformamide
Determined To 1.45 Angstrom Resolution
Length = 374
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
L++ FS+ E P P HEV ++M GIC SD H ++ G+ P+I+GHEA
Sbjct: 17 LKKPFSIEEVEVAP---PKAHEVRIKMVAAGICRSDEHVVS----GNLVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
+GIV VG V +K
Sbjct: 70 AGIVESVGEGVTTVK 84
Score = 45.4 bits (106), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 58/141 (41%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLC---------------RQIFFCATPPDH-----GNLSRYYRHAADF 283
C C CK N C + F C+ P H S+Y +
Sbjct: 97 CGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPIHHFVGVSTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
K+ LE+ L+ S G A + A VT GS + G G +GL ++ +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAVFGLGGVGLSVVMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
+R++ DI + K AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 34/64 (53%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M GIC SD H ++ G+ P+I+GHEA+GIV VG V +K + + +P F
Sbjct: 40 MVAAGICRSDEHVVS----GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|3UKO|B Chain B, Crystal Structure Of S-Nitrosoglutathione Reductase From
Arabidopsis Thaliana, Complex With Nadh
pdb|4GL4|A Chain A, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
pdb|4GL4|B Chain B, Crystal Structure Of Oxidized S-nitrosoglutathione
Reductase From Arabidopsis Thalina, Complex With Nadh
Length = 378
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 79/189 (41%), Gaps = 30/189 (15%)
Query: 244 CRTCTYCKEGRYNLCRQI----------------FFCATPPDH-----GNLSRYYRHAAD 282
CR C +CK G+ NLC ++ F P + S+Y
Sbjct: 98 CRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDV 157
Query: 283 FCHKLPDHVSLEEGALLE---PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
K+ L++ LL P +G A V GS V I G G +GL A+
Sbjct: 158 SVAKIDPTAPLDKVCLLGCGVPTGLGA-VWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTA 216
Query: 340 GASRVVITDILEHKLKTAKEMGADATV-LIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
GASR++ DI K +TAK+ G + V D + ++E+ I++L G D + +C G
Sbjct: 217 GASRIIGIDIDSKKYETAKKFGVNEFVNPKDHDKPIQEV---IVDLTDG-GVDYSFECIG 272
Query: 399 IESTIKLGM 407
S ++ +
Sbjct: 273 NVSVMRAAL 281
Score = 32.7 bits (73), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 68 ILRRRFSLRFREQKP--IED-----PDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
++ + ++ + KP IED P EV +++ +C +D Y G+ D
Sbjct: 6 VITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDA-YTWSGK--DPEGLF 62
Query: 121 PMIVGHEASGIVSKVGAKVKHLKA 144
P I+GHEA+GIV VG V ++A
Sbjct: 63 PCILGHEAAGIVESVGEGVTEVQA 86
Score = 28.5 bits (62), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 2/38 (5%)
Query: 27 PMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC 64
P I+GHEA+GIV VG V ++ + +P ++ C
Sbjct: 63 PCILGHEAAGIVESVGEGVTEVQAGDHV--IPCYQAEC 98
>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DL9|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase From
Tomato (solanum Lycopersicum) In Complex With Nad+
pdb|4DLA|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLA|B Chain B, Crystal Structure Of S-nitrosoglutathione Reductase
Apoenzyme From Tomato (solanum Lycopersicum)
pdb|4DLB|A Chain A, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
pdb|4DLB|B Chain B, Structure Of S-nitrosoglutathione Reductase From Tomato
(solanum Lycopersicum) Crystallized In Presence Of Nadh
And Glutathione
Length = 396
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 73/185 (39%), Gaps = 28/185 (15%)
Query: 244 CRTCTYCKEGRYNLCRQI----------------FFCATPPDH-----GNLSRYYRHAAD 282
CR C +CK G+ NLC ++ F P + S+Y
Sbjct: 116 CRECKFCKSGKTNLCGKVRAATGVGVMMNDRKSRFSINGKPIYHFMGTSTFSQYTVVHDV 175
Query: 283 FCHKLPDHVSLEEGALLE---PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
K+ LE+ LL P +G A V GS V + G G +GL A+A
Sbjct: 176 SVAKIDPVAPLEKVCLLGCGVPTGLGA-VWNTAKVEPGSIVAVFGLGTVGLAVAEGAKAA 234
Query: 340 GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGI 399
GASR++ DI K AK G T I+ + I I++L G D + +C G
Sbjct: 235 GASRIIGIDIDSKKFDRAKNFG--VTEFINPKEHEQPIQQVIVDLTDGGV-DYSFECIGN 291
Query: 400 ESTIK 404
S ++
Sbjct: 292 VSVMR 296
Score = 30.4 bits (67), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 43/93 (46%), Gaps = 10/93 (10%)
Query: 58 PEFRNVCLSPILRRRFSLRFREQKP--IED-----PDDHEVLLEMHCVGICGSDVHYLTH 110
P + ++ + ++ + KP IED P EV +++ +C +D Y
Sbjct: 14 PNSSSATQGQVITCKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDA-YTWS 72
Query: 111 GQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 143
G+ D P ++GHEA+GIV VG V ++
Sbjct: 73 GK--DPEGLFPCVLGHEAAGIVESVGEGVTEVQ 103
>pdb|2NVB|A Chain A, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|B Chain B, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|C Chain C, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
pdb|2NVB|D Chain D, Contribution Of Pro275 To The Thermostability Of The
Alcohol Dehydrogenases (Adhs)
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
LP + LE ++ + ++ G H A + LG+ V + G GP+GL+ + A+ GA R++
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
+ AK GA V N+ I + I+ L +G+ D I G
Sbjct: 196 AVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGG 244
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 78 REQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGA 137
++KP P D ++ V C SD+H + G IG+ MI+GHEA G V +VG+
Sbjct: 16 EKEKPAPGPFD--AIVRPLAVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGS 70
Query: 138 KVKHLKATRPGGCLVI 153
+VK K PG +V+
Sbjct: 71 EVKDFK---PGDRVVV 83
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 3 CVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT---RFVPE 59
V C SD+H + G IG+ MI+GHEA G V +VG++VK K ++ P+
Sbjct: 33 AVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPD 89
Query: 60 FRN 62
+R
Sbjct: 90 WRT 92
>pdb|1YKF|A Chain A, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|B Chain B, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|C Chain C, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1YKF|D Chain D, Nadp-Dependent Alcohol Dehydrogenase From Thermoanaerobium
Brockii
pdb|1BXZ|A Chain A, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|B Chain B, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|C Chain C, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
pdb|1BXZ|D Chain D, Crystal Structure Of A Thermophilic Alcohol Dehydrogenase
Substrate Complex From Thermoanaerobacter Brockii
Length = 352
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
LP + LE ++ + ++ G H A + LG+ V + G GP+GL+ + A+ GA R++
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
+ AK GA V N+ I + I+ L +G+ D I G
Sbjct: 196 AVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGG 244
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 78 REQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGA 137
++KP P D ++ V C SD+H + G IG+ MI+GHEA G V +VG+
Sbjct: 16 EKEKPAPGPFD--AIVRPLAVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGS 70
Query: 138 KVKHLKATRPGGCLVI 153
+VK K PG +V+
Sbjct: 71 EVKDFK---PGDRVVV 83
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 6/63 (9%)
Query: 3 CVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT---RFVPE 59
V C SD+H + G IG+ MI+GHEA G V +VG++VK K ++ P+
Sbjct: 33 AVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGSEVKDFKPGDRVVVPAITPD 89
Query: 60 FRN 62
+R
Sbjct: 90 WRT 92
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/154 (30%), Positives = 68/154 (44%), Gaps = 16/154 (10%)
Query: 221 TGAGNAIKVMIHCDRVAIEPGVP-----CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSR 275
+ G+ + + DRV GVP C C +C +G LC + + G
Sbjct: 70 SAVGSGVSRVKEGDRV----GVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVN-GGYGE 124
Query: 276 YYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVT---LGSKVLITGAGPIGLVT 332
Y ++ LPD V E A + L GV + VT G V+I+G G +G V
Sbjct: 125 YVVADPNYVGLLPDKVGFVEIAPI--LCAGVTVYKGLKVTDTRPGQWVVISGIGGLGHVA 182
Query: 333 LLTARALGASRVVITDILEHKLKTAKEMGADATV 366
+ ARA+G RV DI + KL A+ +GA+ V
Sbjct: 183 VQYARAMGL-RVAAVDIDDAKLNLARRLGAEVAV 215
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%), Gaps = 6/67 (8%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD--PMIVGHEASGIVSKVG 136
++ P+ P +V +++ G+C +D+H GD+ + P I GHE G VS VG
Sbjct: 18 DEVPVPQPGPGQVQVKIEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVSAVG 73
Query: 137 AKVKHLK 143
+ V +K
Sbjct: 74 SGVSRVK 80
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 7/66 (10%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSD--PMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP 58
+ G+C +D+H GD+ + P I GHE G VS VG+ V +K ++ VP
Sbjct: 34 IEASGVCHTDLHAAD----GDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEGDRVG-VP 88
Query: 59 EFRNVC 64
+ C
Sbjct: 89 WLYSAC 94
>pdb|1Y9A|A Chain A, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
pdb|1Y9A|C Chain C, Alcohol Dehydrogenase From Entamoeba Histolotica In
Complex With Cacodylate
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALLEPL-SVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
LP + E+ +L + + G H A + LG V + G GP+GL+++ A LGA R+
Sbjct: 136 LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIF 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
+H A E GA + N+ +I I++ G+ DK + G
Sbjct: 196 AVGSRKHCCDIALEYGATDII----NYKNGDIVEQILKATDGKGVDKVVIAGG 244
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 7 CGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQ 53
C SD H + G IGD MI+GHEA G + KVG+ VK LKV ++
Sbjct: 37 CTSDTHTVWAGAIGDRH---DMILGHEAVGQIVKVGSLVKRLKVGDK 80
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 101 CGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 143
C SD H + G IGD MI+GHEA G + KVG+ VK LK
Sbjct: 37 CTSDTHTVWAGAIGDRH---DMILGHEAVGQIVKVGSLVKRLK 76
>pdb|2OUI|A Chain A, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|B Chain B, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|C Chain C, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
pdb|2OUI|D Chain D, D275p Mutant Of Alcohol Dehydrogenase From Protozoa
Entamoeba Histolytica
Length = 360
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 52/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALLEPL-SVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
LP + E+ +L + + G H A + LG V + G GP+GL+++ A LGA R+
Sbjct: 136 LPRDIKPEDAVMLSDMVTTGFHGAELANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIF 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
+H A E GA + N+ +I I++ G+ DK + G
Sbjct: 196 AVGSRKHCCDIALEYGATDII----NYKNGDIVEQILKATDGKGVDKVVIAGG 244
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 29/47 (61%), Gaps = 3/47 (6%)
Query: 7 CGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQ 53
C SD H + G IGD MI+GHEA G + KVG+ VK LKV ++
Sbjct: 37 CTSDTHTVWAGAIGDRH---DMILGHEAVGQIVKVGSLVKRLKVGDK 80
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/43 (51%), Positives = 26/43 (60%), Gaps = 3/43 (6%)
Query: 101 CGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 143
C SD H + G IGD MI+GHEA G + KVG+ VK LK
Sbjct: 37 CTSDTHTVWAGAIGDRH---DMILGHEAVGQIVKVGSLVKRLK 76
>pdb|3FPL|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of C. Beijerinckii
Adh By T. Brockii Adh
Length = 351
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
LP + LE ++ + ++ G H A + LG+ V + G GP+GL+ + A+ GA R++
Sbjct: 136 LPKDMPLENAVMITDMMTTGFHGAELADIELGATVAVLGIGPVGLMAVAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
+ AK GA V N+ I + I+ L +G+ D I G
Sbjct: 196 AVGSRPVCVDAAKYYGATDIV----NYKDGPIESQIMNLTEGKGVDAAIIAGG 244
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 9/68 (13%)
Query: 3 CVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN 62
V C SD+H + G +GD + MI+GHEA G V +VG++VK K ++ VP
Sbjct: 33 AVSPCTSDIHTVFEGALGDRK---NMILGHEAVGEVVEVGSEVKDFKPGDRV-IVP---- 84
Query: 63 VCLSPILR 70
C +P R
Sbjct: 85 -CTTPDWR 91
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 77 FREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVG 136
+++P+ ++ ++ V C SD+H + G +GD + MI+GHEA G V +VG
Sbjct: 15 IEKERPVAG--SYDAIVRPLAVSPCTSDIHTVFEGALGDRK---NMILGHEAVGEVVEVG 69
Query: 137 AKVKHLK 143
++VK K
Sbjct: 70 SEVKDFK 76
>pdb|1AXE|A Chain A, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
pdb|1AXE|B Chain B, Crystal Structure Of The Active-Site Mutant Phe93->trp Of
Horse Liver Alcohol Dehydrogenase In Complex With Nad
And Inhibitor Trifluoroethanol
Length = 374
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + E+KP + P HEV ++M GIC SD H ++ G
Sbjct: 6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
P+I GHEA+GIV +G V + RPG
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTV---RPG 86
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
A + A VT GS + G G +GL ++ +A GA+R++ DI + K AKE+GA V
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
D ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257
Score = 33.5 bits (75), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M GIC SD H ++ G P+I GHEA+GIV +G V ++ + + +P +
Sbjct: 40 MVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGD--KVIPLW 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|1MGO|A Chain A, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
pdb|1MGO|B Chain B, Horse Liver Alcohol Dehydrogenase Phe93ala Mutant
Length = 374
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + E+KP + P HEV ++M GIC SD H ++ G
Sbjct: 6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
P+I GHEA+GIV +G V + RPG
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTV---RPG 86
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
A + A VT GS + G G +GL ++ +A GA+R++ DI + K AKE+GA V
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
D ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257
Score = 33.1 bits (74), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 49
M GIC SD H ++ G P+I GHEA+GIV +G V ++
Sbjct: 40 MVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVR 84
>pdb|1QLH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nad Double
Mutant Of Gly 293 Ala And Pro 295 Thr
pdb|1QLJ|A Chain A, Horse Liver Alcohol Dehydrogenase Apo Enzyme Double Mutant
Of Gly 293 Ala And Pro 295 Thr
Length = 374
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + E+KP + P HEV ++M GIC SD H ++ G
Sbjct: 6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
P+I GHEA+GIV +G V + RPG
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTV---RPG 86
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
A + A VT GS + G G +GL ++ +A GA+R++ DI + K AKE+GA V
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
D ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257
Score = 34.7 bits (78), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M GIC SD H ++ G P+I GHEA+GIV +G V ++ + + +P F
Sbjct: 40 MVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|1AXG|A Chain A, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|B Chain B, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|C Chain C, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
pdb|1AXG|D Chain D, Crystal Structure Of The Val203->ala Mutant Of Liver
Alcohol Dehydrogenase Complexed With Cofactor Nad And
Inhibitor Trifluoroethanol Solved To 2.5 Angstrom
Resolution
Length = 374
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + E+KP + P HEV ++M GIC SD H ++ G
Sbjct: 6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
P+I GHEA+GIV +G V + RPG
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTV---RPG 86
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
A + A VT GS + G G GL ++ +A GA+R++ DI + K AKE+GA V
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
D ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M GIC SD H ++ G P+I GHEA+GIV +G V ++ + + +P F
Sbjct: 40 MVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|1N8K|A Chain A, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
pdb|1N8K|B Chain B, Horse Liver Alcohol Dehydrogenase Val292thr Mutant
Complexed To Nad+ And Pyrazole
Length = 374
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + E+KP + P HEV ++M GIC SD H ++ G
Sbjct: 6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
P+I GHEA+GIV +G V + RPG
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTV---RPG 86
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
A + A VT GS + G G +GL ++ +A GA+R++ DI + K AKE+GA V
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
D ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257
Score = 34.7 bits (78), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M GIC SD H ++ G P+I GHEA+GIV +G V ++ + + +P F
Sbjct: 40 MVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|6ADH|A Chain A, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|6ADH|B Chain B, Structure Of Triclinic Ternary Complex Of Horse Liver
Alcohol Dehydrogenase At 2.9 Angstroms Resolution
pdb|2OHX|A Chain A, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OHX|B Chain B, Refined Crystal Structure Of Liver Alcohol Dehydrogenase-
Nadh Complex At 1.8 Angstroms Resolution
pdb|2OXI|A Chain A, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|2OXI|B Chain B, Refined Crystal Structure Of Cu-Substituted Alcohol
Dehydrogenase At 2.1 Angstroms Resolution
pdb|1HLD|A Chain A, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1HLD|B Chain B, Structures Of Horse Liver Alcohol Dehydrogenase Complexed
With Nad+ And Substituted Benzyl Alcohols
pdb|1ADB|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADB|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|A Chain A, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|1ADC|B Chain B, Crystallographic Studies Of Isosteric Nad Analogues Bound
To Alcohol Dehydrogenase: Specificity And Substrate
Binding In Two Ternary Complexes
pdb|3BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|3BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3s)3-Butylthiolane 1-Oxide
pdb|1LDY|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDY|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
Cyclohexyl Formamide (Cxf)
pdb|1LDE|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1LDE|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
N-Formyl Piperdine
pdb|1BTO|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1BTO|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed To Nadh And
(1s, 3r)3-Butylthiolane 1-Oxide
pdb|1HET|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HET|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing A Hydroxide Adduct To Nadh
pdb|1HEU|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HEU|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|A Chain A, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1HF3|B Chain B, Atomic X-Ray Structure Of Liver Alcohol Dehydrogenase
Containing Cadmium And A Hydroxide Adduct To Nadh
pdb|1MG0|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1MG0|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2, 3-Difluorobenzyl Alcohol
pdb|1N92|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1N92|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
4- Iodopyrazole
pdb|1P1R|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|C Chain C, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1P1R|D Chain D, Horse Liver Alcohol Dehydrogenase Complexed With Nadh And
R- N-1-Methylhexylformamide
pdb|1YE3|A Chain A, Horse Liver Alcohol Dehydrogenase Apoenzyme
pdb|2JHF|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHF|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|A Chain A, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|2JHG|B Chain B, Structural Evidence For A Ligand Coordination Switch In
Liver Alcohol Dehydrogenase
pdb|1ADF|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|1ADG|A Chain A, Crystallographic Studies Of Two Alcohol
Dehydrogenase-Bound Analogs Of Thiazole-4-Carboxamide
Adenine Dinucleotide (Tad), The Active Anabolite Of The
Antitumor Agent Tiazofurin
pdb|5ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|7ADH|A Chain A, Three-Dimensional Structure Of Isonicotinimidylated Liver
Alcohol Dehydrogenase
pdb|8ADH|A Chain A, Interdomain Motion In Liver Alcohol Dehydrogenase.
Structural And Energetic Analysis Of The Hinge Bending
Mode
pdb|4DWV|A Chain A, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DWV|B Chain B, Horse Alcohol Dehydrogenase Complexed With Nad+ And
2,3,4,5,6- Pentafluorobenzyl Alcohol
pdb|4DXH|A Chain A, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
pdb|4DXH|B Chain B, Horse Liver Alcohol Dehydrogenase Complexed With Nad+ And
2,2,2- Trifluoroethanol
Length = 374
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + E+KP + P HEV ++M GIC SD H ++ G
Sbjct: 6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
P+I GHEA+GIV +G V + RPG
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTV---RPG 86
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
A + A VT GS + G G +GL ++ +A GA+R++ DI + K AKE+GA V
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
D ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257
Score = 34.7 bits (78), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M GIC SD H ++ G P+I GHEA+GIV +G V ++ + + +P F
Sbjct: 40 MVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|1A71|A Chain A, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A71|B Chain B, Ternary Complex Of An Active Site Double Mutant Of Horse
Liver Alcohol Dehydrogenase, Phe93>trp, Val203>ala With
Nad And Trifluoroethanol
pdb|1A72|A Chain A, An Active-Site Double Mutant (Phe93->trp, Val203->ala) Of
Horse Liver Alcohol Dehydrogenase In Complex With The
Isosteric Nad Analog Cpad
Length = 374
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + E+KP + P HEV ++M GIC SD H ++ G
Sbjct: 6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
P+I GHEA+GIV +G V + RPG
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTV---RPG 86
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
A + A VT GS + G G GL ++ +A GA+R++ DI + K AKE+GA V
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGAGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
D ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257
Score = 33.1 bits (74), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M GIC SD H ++ G P+I GHEA+GIV +G V ++ + + +P +
Sbjct: 40 MVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGD--KVIPLW 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|1JU9|A Chain A, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
pdb|1JU9|B Chain B, Horse Liver Alcohol Dehydrogenase Val292ser Mutant
Length = 374
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + E+KP + P HEV ++M GIC SD H ++ G
Sbjct: 6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
P+I GHEA+GIV +G V + RPG
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTV---RPG 86
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
A + A VT GS + G G +GL ++ +A GA+R++ DI + K AKE+GA V
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
D ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257
Score = 34.7 bits (78), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M GIC SD H ++ G P+I GHEA+GIV +G V ++ + + +P F
Sbjct: 40 MVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|3OQ6|A Chain A, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
pdb|3OQ6|B Chain B, Horse Liver Alcohol Dehydrogenase A317c Mutant Complexed
With Nad+ And 2,3,4,5,6-Pentafluorobenzyl Alcohol
Length = 374
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 14/88 (15%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + E+KP + P HEV ++M GIC SD H ++ G
Sbjct: 6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
P+I GHEA+GIV +G V + RPG
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTV---RPG 86
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV- 366
A + A VT GS + G G +GL ++ +A GA+R++ DI + K AKE+GA V
Sbjct: 183 AVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVN 242
Query: 367 LIDRNHSLEEISTHI 381
D ++E+ T +
Sbjct: 243 PQDYKKPIQEVLTEM 257
Score = 34.7 bits (78), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M GIC SD H ++ G P+I GHEA+GIV +G V ++ + + +P F
Sbjct: 40 MVATGICRSDDHVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|B Chain B, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|C Chain C, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
pdb|3MEQ|D Chain D, Crystal Structure Of Alcohol Dehydrogenase From Brucella
Mel
Length = 365
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 68/148 (45%), Gaps = 10/148 (6%)
Query: 224 GNAIKVMIHCDRVAIEPGV--PCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAA 281
G+ +K + DRV I P + C C +C G LC + + G + Y
Sbjct: 96 GSGVKHVKEGDRVGI-PWLYTACGHCRHCLGGWETLCEEQLNTGYSVN-GGFAEYVVADP 153
Query: 282 DFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVT---LGSKVLITGAGPIGLVTLLTARA 338
+F LP ++ E A + L GV + VT G V+I+G G +G + + ARA
Sbjct: 154 NFVGHLPKNIDFNEIAPV--LCAGVTVYKGLKVTDTKPGDWVVISGIGGLGHMAVQYARA 211
Query: 339 LGASRVVITDILEHKLKTAKEMGADATV 366
+G + V DI + KL A+ +GA TV
Sbjct: 212 MGLN-VAAVDIDDRKLDLARRLGATVTV 238
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF--RLSDPMIVGHEASGIVSKVG 136
++ PI P ++ + + G+C +D+H GD+ + + P I GHE G VS VG
Sbjct: 41 DEVPIPQPGPGQIQVAIQASGVCHTDLHAAE----GDWPVKPNPPFIPGHEGVGFVSAVG 96
Query: 137 AKVKHLK 143
+ VKH+K
Sbjct: 97 SGVKHVK 103
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 50/176 (28%)
Query: 1 MHCVGICGSDVHYLTHGQIGDF--RLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP 58
+ G+C +D+H GD+ + + P I GHE G VS VG+ VKH+K ++ +P
Sbjct: 57 IQASGVCHTDLHAAE----GDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEGDRVG-IP 111
Query: 59 EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG----ICGSDVH--YLTHGQ 112
C H HC+G +C ++ Y +G
Sbjct: 112 WLYTAC-----------------------GH----CRHCLGGWETLCEEQLNTGYSVNGG 144
Query: 113 IGDFRLSDPMIVGHEASGIVSKVGAKV--------KHLKA--TRPGGCLVIVGAGS 158
++ ++DP VGH I A V K LK T+PG +VI G G
Sbjct: 145 FAEYVVADPNFVGHLPKNIDFNEIAPVLCAGVTVYKGLKVTDTKPGDWVVISGIGG 200
>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDX|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|3HUD|A Chain A, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|3HUD|B Chain B, The Structure Of Human Beta 1 Beta 1 Alcohol
Dehydrogenase: Catalytic Effects Of Non-Active-Site
Substitutions
pdb|1DEH|A Chain A, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1DEH|B Chain B, Crystallization Of Human Beta1 Alcohol Dehydrogenase (15
MgML) IN 50 MM SODIUM PHOSPHATE (PH 7.5), 2.0 MM NAD+
AND 1 Mm 4-Iodopyrazole At 25 Oc, 13% (WV) PEG 8000
pdb|1HSZ|A Chain A, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1HSZ|B Chain B, Human Beta-1 Alcohol Dehydrogenase (Adh1b1)
pdb|1U3U|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3U|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-benzylformamide
Determined To 1.6 Angstrom Resolution
pdb|1U3V|A Chain A, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
pdb|1U3V|B Chain B, Crystal Structure Of Human Alcohol Dehydrogenase Beta-1-
Beta-1 Isoform Complexed With N-Heptylformamide
Determined To 1.65 Angstrom Resolution
Length = 374
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
+++ FS+ E P P +EV ++M VGIC +D H ++ G+ P+I+GHEA
Sbjct: 17 VKKPFSIEDVEVAP---PKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
+GIV VG V +K
Sbjct: 70 AGIVESVGEGVTTVK 84
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLC---------------RQIFFCATPPDH-----GNLSRYYRHAADF 283
C C CK N C + F C P H S+Y +
Sbjct: 97 CGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
K+ LE+ L+ S G A A VT GS + G G +GL ++ +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
+R++ DI + K AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M VGIC +D H ++ G+ P+I+GHEA+GIV VG V +K + + +P F
Sbjct: 40 MVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
pdb|1HTB|B Chain B, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10
MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+
And 1 Mm 4-Iodopyrazole At 25 C
Length = 374
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
+++ FS+ E P P +EV ++M VGIC +D H ++ G+ P+I+GHEA
Sbjct: 17 VKKPFSIEDVEVAP---PKAYEVRIKMVAVGICRTDDHVVS----GNLVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
+GIV VG V +K
Sbjct: 70 AGIVESVGEGVTTVK 84
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLC---------------RQIFFCATPPDH-----GNLSRYYRHAADF 283
C C CK N C + F C P H S+Y +
Sbjct: 97 CGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
K+ LE+ L+ S G A A VT GS + G G +GL ++ +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
+R++ DI + K AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M VGIC +D H ++ G+ P+I+GHEA+GIV VG V +K + + +P F
Sbjct: 40 MVAVGICRTDDHVVS----GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|2DPH|A Chain A, Crystal Structure Of Formaldehyde Dismutase
pdb|2DPH|B Chain B, Crystal Structure Of Formaldehyde Dismutase
Length = 398
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 85/198 (42%), Gaps = 27/198 (13%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHG------NLSRYY 277
G+ +++M D V++ V C C CKE R ++C PD +L +
Sbjct: 76 GSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNL---VNPDADLGAFGFDLKGWS 132
Query: 278 RHAADFCH-KLPDHVSLEEGA-------------LLEPLSVGVHACRRAGVTLGSKVLIT 323
A++ D++ L+ G + + L G H C AGV GS V I
Sbjct: 133 GGQAEYVLVPYADYMLLKFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGVKPGSHVYIA 192
Query: 324 GAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE 383
GAGP+G AR LGA+ V++ D +LK + G + L RN + + I +
Sbjct: 193 GAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSDAGFETIDL--RNSA--PLRDQIDQ 248
Query: 384 LLQGEQPDKTIDCSGIES 401
+L + D +D G E+
Sbjct: 249 ILGKPEVDCGVDAVGFEA 266
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%), Gaps = 4/53 (7%)
Query: 88 DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK 140
+H V+L++ ICGSD H G F + ++GHE +G V + G+ V+
Sbjct: 32 EHAVILKVVSTNICGSDQHIYR----GRFIVPKGHVLGHEITGEVVEKGSDVE 80
>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
pdb|1HDY|B Chain B, Three-Dimensional Structures Of Three Human Alcohol
Dehydrogenase Variants: Correlations With Their
Functional Differences
Length = 374
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 7/75 (9%)
Query: 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA 128
+++ FS+ E P P +EV ++M VGIC +D H ++ G+ P+I+GHEA
Sbjct: 17 VKKPFSIEDVEVAP---PKAYEVRIKMVAVGICHTDDHVVS----GNLVTPLPVILGHEA 69
Query: 129 SGIVSKVGAKVKHLK 143
+GIV VG V +K
Sbjct: 70 AGIVESVGEGVTTVK 84
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 56/141 (39%), Gaps = 22/141 (15%)
Query: 244 CRTCTYCKEGRYNLC---------------RQIFFCATPPDH-----GNLSRYYRHAADF 283
C C CK N C + F C P H S+Y +
Sbjct: 97 CGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENA 156
Query: 284 CHKLPDHVSLEEGALLE-PLSVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
K+ LE+ L+ S G A A VT GS + G G +GL ++ +A GA
Sbjct: 157 VAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGA 362
+R++ DI + K AKE+GA
Sbjct: 217 ARIIAVDINKDKFAKAKELGA 237
Score = 37.7 bits (86), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M VGIC +D H ++ G+ P+I+GHEA+GIV VG V +K + + +P F
Sbjct: 40 MVAVGICHTDDHVVS----GNLVTPLPVILGHEAAGIVESVGEGVTTVKPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3E|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh
pdb|1E3I|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
pdb|1E3I|B Chain B, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh And
Inhibitor
Length = 376
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIG 329
+ S+Y + ++ D +LE L+ S G A A VT GS + G G +G
Sbjct: 149 SFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVG 208
Query: 330 LVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389
L ++ + GASR++ DI K AK +GA + L++ +I L
Sbjct: 209 LSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL---NPRELDKPVQDVITELTAGG 265
Query: 390 PDKTIDCSGIESTIK 404
D ++DC+G T+K
Sbjct: 266 VDYSLDCAGTAQTLK 280
Score = 36.6 bits (83), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 13/89 (14%)
Query: 6 ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVPEFR-- 61
+C +D++ + F P+++GHE +GIV VG V + K ++ F P+ +
Sbjct: 45 VCPTDINATDPKKKALF----PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRC 100
Query: 62 NVCLSPILR-----RRFSLRFREQKPIED 85
+CLSP+ R F +Q+ +ED
Sbjct: 101 KLCLSPLTNLCGKLRNFKYPTIDQELMED 129
Score = 33.9 bits (76), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 64 CLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMI 123
C + I + S E+ + P EV +++ +C +D++ + F P++
Sbjct: 9 CKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKKALF----PVV 64
Query: 124 VGHEASGIVSKVGAKVKHLK 143
+GHE +GIV VG V + K
Sbjct: 65 LGHECAGIVESVGPGVTNFK 84
>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEAS 129
++ FS+ E P P HEV ++M GIC SD H ++ G P+I GHEA+
Sbjct: 18 KKPFSIEEVEVAP---PKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAA 70
Query: 130 GIVSKVGAKVKHLKATRPG 148
GIV +G V + RPG
Sbjct: 71 GIVESIGEGVTTV---RPG 86
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 32/165 (19%)
Query: 244 CRTCTYCKEGRYNLCRQI--------------FFCATPPDHGNLSRYYRHAADFC-HKLP 288
C C+ CK NLC + F C P H ++ + F + +
Sbjct: 97 CGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIH-----HFLGTSTFSQYTVV 151
Query: 289 DHVSLEEGALLEPL----------SVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTAR 337
D +S+ + PL S G A + A VT GS + G G +GL ++ +
Sbjct: 152 DEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 211
Query: 338 ALGASRVVITDILEHKLKTAKEMGADATV-LIDRNHSLEEISTHI 381
A GA+R++ DI + K AKE+GA V D ++E+ T +
Sbjct: 212 AAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 256
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVP 58
M GIC SD H ++ G P+I GHEA+GIV +G V ++ ++ F+P
Sbjct: 40 MVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIP 95
Query: 59 E 59
+
Sbjct: 96 Q 96
>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At
1.54 A Resolution
Length = 373
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 10/79 (12%)
Query: 70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEAS 129
++ FS+ E P P HEV ++M GIC SD H ++ G P+I GHEA+
Sbjct: 18 KKPFSIEEVEVAP---PKAHEVRIKMVAAGICRSDDHVVS----GTLVAPLPVIAGHEAA 70
Query: 130 GIVSKVGAKVKHLKATRPG 148
GIV +G V + RPG
Sbjct: 71 GIVESIGEGVTTV---RPG 86
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 32/165 (19%)
Query: 244 CRTCTYCKEGRYNLCRQI--------------FFCATPPDHGNLSRYYRHAADFC-HKLP 288
C C+ CK NLC + F C P H ++ + F + +
Sbjct: 97 CGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIH-----HFLGTSTFSQYTVV 151
Query: 289 DHVSLEEGALLEPL----------SVGV-HACRRAGVTLGSKVLITGAGPIGLVTLLTAR 337
D +S+ + PL S G A + A VT GS + G G +GL ++ +
Sbjct: 152 DEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCK 211
Query: 338 ALGASRVVITDILEHKLKTAKEMGADATV-LIDRNHSLEEISTHI 381
A GA+R++ DI + K AKE+GA V D ++E+ T +
Sbjct: 212 AAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEM 256
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 32/61 (52%), Gaps = 6/61 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVP 58
M GIC SD H ++ G P+I GHEA+GIV +G V ++ ++ F+P
Sbjct: 40 MVAAGICRSDDHVVS----GTLVAPLPVIAGHEAAGIVESIGEGVTTVRPGDKVIPLFIP 95
Query: 59 E 59
+
Sbjct: 96 Q 96
>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
pdb|1E3L|B Chain B, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase
Complex With Nadh
Length = 376
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 5/135 (3%)
Query: 272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIG 329
+ S+Y + ++ D +LE L+ S G A A VT GS + G G +G
Sbjct: 149 SFSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVG 208
Query: 330 LVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389
L ++ + GASR++ DI K AK +GA + L++ +I L
Sbjct: 209 LSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCL---NPRELDKPVQDVITELTAGG 265
Query: 390 PDKTIDCSGIESTIK 404
D ++DC+G T+K
Sbjct: 266 VDYSLDCAGTAQTLK 280
Score = 36.2 bits (82), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 9/68 (13%)
Query: 27 PMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVPEFR--NVCLSPILR-----RRFSLRF 77
P+++GHE +GIV VG V + K ++ F P+ + +CLSP+ R F
Sbjct: 62 PVVLGHECAGIVESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPT 121
Query: 78 REQKPIED 85
+Q+ +ED
Sbjct: 122 IDQELMED 129
Score = 33.1 bits (74), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 38/80 (47%), Gaps = 4/80 (5%)
Query: 64 CLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMI 123
C + I + S E+ + P EV +++ +C +D++ + F P++
Sbjct: 9 CKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCHTDINATDPKKKALF----PVV 64
Query: 124 VGHEASGIVSKVGAKVKHLK 143
+GHE +GIV VG V + K
Sbjct: 65 LGHECAGIVESVGPGVTNFK 84
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 70/164 (42%), Gaps = 12/164 (7%)
Query: 224 GNAIKVMIHCDRVAIEPGVP-----CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR 278
G+ + + DRV G+P C C +C G LC + G + Y
Sbjct: 77 GSGVTRVKEGDRV----GIPWLYTACGCCEHCLTGWETLCESQQNTGYSVN-GGYAEYVL 131
Query: 279 HAADFCHKLPDHVSLEEGALLEPLSVGVH-ACRRAGVTLGSKVLITGAGPIGLVTLLTAR 337
++ LP +V E A + V V+ ++ G V I+G G +G V + AR
Sbjct: 132 ADPNYVGILPKNVEFAEIAPILCAGVTVYKGLKQTNARPGQWVAISGIGGLGHVAVQYAR 191
Query: 338 ALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHI 381
A+G V DI + KL+ A+++GA TV + +E I I
Sbjct: 192 AMGL-HVAAIDIDDAKLELARKLGASLTVNARQEDPVEAIQRDI 234
Score = 37.4 bits (85), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPM--IVGHEASGIV 132
LR E K + P +VL+++ G+C +D+H GD+ + P+ I GHE G V
Sbjct: 19 LRIEEVK-VPLPGPGQVLVKIEASGVCHTDLHAAE----GDWPVKPPLPFIPGHEGVGYV 73
Query: 133 SKVGAKVKHLK 143
+ VG+ V +K
Sbjct: 74 AAVGSGVTRVK 84
Score = 30.4 bits (67), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 7/62 (11%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPM--IVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN 62
G+C +D+H GD+ + P+ I GHE G V+ VG+ V +K ++ +P
Sbjct: 42 GVCHTDLHAAE----GDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRVG-IPWLYT 96
Query: 63 VC 64
C
Sbjct: 97 AC 98
>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|B Chain B, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|C Chain C, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1AGN|D Chain D, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase
pdb|1D1S|A Chain A, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|B Chain B, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|C Chain C, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
pdb|1D1S|D Chain D, Wild-type Human Sigma (class Iv) Alcohol Dehydrogenase
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEAS 129
++ FS+ E P P EV +++ GIC +D H + + F P+IVGHEA+
Sbjct: 18 KQPFSIEEIEVAP---PKTKEVRIKILATGICRTDDHVIKGTMVSKF----PVIVGHEAT 70
Query: 130 GIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEID 174
GIV +G V +K PG D IPL L +E +
Sbjct: 71 GIVESIGEGVTTVK---PG-----------DKVIPLFLPQCRECN 101
Score = 41.6 bits (96), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 244 CRTCTYCKEGRYNLC-------RQI-------FFCATPPDH-----GNLSRYYRHAADFC 284
CR C C+ NLC R + F C P H + Y
Sbjct: 97 CRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFMNTSTFTEYTVVDESSV 156
Query: 285 HKLPDHVSLEEGALLE-PLSVGVHACRRAG-VTLGSKVLITGAGPIGLVTLLTARALGAS 342
K+ D E+ L+ S G A + G V GS ++ G G +GL ++ ++ GAS
Sbjct: 157 AKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGAS 216
Query: 343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL 384
R++ D+ +K K K M AT I S + IS + E+
Sbjct: 217 RIIGIDL--NKDKFEKAMAVGATECISPKDSTKPISEVLSEM 256
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVPEFR- 61
GIC +D H + + F P+IVGHEA+GIV +G V +K ++ F+P+ R
Sbjct: 44 GICRTDDHVIKGTMVSKF----PVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRE 99
Query: 62 -NVCLSP 67
N C +P
Sbjct: 100 CNACRNP 106
>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|B Chain B, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|C Chain C, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
pdb|1D1T|D Chain D, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine
At Position 141
Length = 373
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/105 (32%), Positives = 49/105 (46%), Gaps = 21/105 (20%)
Query: 70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEAS 129
++ FS+ E P P EV +++ GIC +D H + + F P+IVGHEA+
Sbjct: 18 KQPFSIEEIEVAP---PKTKEVRIKILATGICRTDDHVIKGTMVSKF----PVIVGHEAT 70
Query: 130 GIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEID 174
GIV +G V +K PG D IPL L +E +
Sbjct: 71 GIVESIGEGVTTVK---PG-----------DKVIPLFLPQCRECN 101
Score = 41.6 bits (96), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 44/162 (27%), Positives = 65/162 (40%), Gaps = 23/162 (14%)
Query: 244 CRTCTYCKEGRYNLC-------RQI-------FFCATPPDH-----GNLSRYYRHAADFC 284
CR C C+ NLC R + F C P H + Y
Sbjct: 97 CRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPVHHFLNTSTFTEYTVVDESSV 156
Query: 285 HKLPDHVSLEEGALLE-PLSVGVHACRRAG-VTLGSKVLITGAGPIGLVTLLTARALGAS 342
K+ D E+ L+ S G A + G V GS ++ G G +GL ++ ++ GAS
Sbjct: 157 AKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGAS 216
Query: 343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL 384
R++ D+ +K K K M AT I S + IS + E+
Sbjct: 217 RIIGIDL--NKDKFEKAMAVGATECISPKDSTKPISEVLSEM 256
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 8/67 (11%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVPEFR- 61
GIC +D H + + F P+IVGHEA+GIV +G V +K ++ F+P+ R
Sbjct: 44 GICRTDDHVIKGTMVSKF----PVIVGHEATGIVESIGEGVTTVKPGDKVIPLFLPQCRE 99
Query: 62 -NVCLSP 67
N C +P
Sbjct: 100 CNACRNP 106
>pdb|3FSR|A Chain A, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|B Chain B, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|C Chain C, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
pdb|3FSR|D Chain D, Chimera Of Alcohol Dehydrogenase By Exchange Of The
Cofactor Binding Domain Res 153-295 Of T. Brockii Adh By
C. Beijerinckii Adh
Length = 352
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
LP + LE ++ + ++ G H A + +GS V++ G G +GL+ + A+ GA R++
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
++ AK GA + N+ I +++L G+ D+ I G T+
Sbjct: 196 GVGSRPICVEAAKFYGATDIL----NYKNGHIVDQVMKLTNGKGVDRVIMAGGGSETL 249
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 78 REQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGA 137
++KP P D ++ V C SD+H + G IG+ MI+GHEA G V +VG+
Sbjct: 16 EKEKPAPGPFD--AIVRPLAVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGS 70
Query: 138 KVKHLKATRPGGCLVI 153
+VK K PG +V+
Sbjct: 71 EVKDFK---PGDRVVV 83
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 96/251 (38%), Gaps = 53/251 (21%)
Query: 3 CVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN 62
V C SD+H + G IG+ MI+GHEA G V +VG++VK K ++ VP
Sbjct: 33 AVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGSEVKDFKPGDRV-VVPAITP 88
Query: 63 VCLSPILRRRF---------SLRFREQK--------------------PIEDPDDHEVLL 93
+ ++R + +F K P E P + V++
Sbjct: 89 DWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMI 148
Query: 94 -EMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV 152
+M G G+++ + G S +++G A G++ GAK++ G
Sbjct: 149 PDMMTTGFHGAELADIQMG-------SSVVVIGIGAVGLMGIAGAKLR--------GAGR 193
Query: 153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDT 212
I+G GS+ P+ + K + Y N + + M + V ++I E
Sbjct: 194 IIGVGSR----PICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGGSETL 249
Query: 213 LHAFETAKTGA 223
A K G
Sbjct: 250 SQAVSMVKPGG 260
>pdb|1QV6|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV6|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,4-Difluorobenzyl Alcohol
pdb|1QV7|A Chain A, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
pdb|1QV7|B Chain B, Horse Liver Alcohol Dehydrogenase His51glnLYS228ARG MUTANT
Complexed With Nad+ And 2,3-Difluorobenzyl Alcohol
Length = 374
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 14/88 (15%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + E+KP + P HEV ++M GIC SD ++ G
Sbjct: 6 VIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDQVVS----GTLVTPL 61
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPG 148
P+I GHEA+GIV +G V + RPG
Sbjct: 62 PVIAGHEAAGIVESIGEGVTTV---RPG 86
Score = 41.6 bits (96), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 41/76 (53%), Gaps = 1/76 (1%)
Query: 307 HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATV 366
A + A VT GS + G G +GL ++ +A GA+R++ DI + + AKE+GA V
Sbjct: 182 SAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDRFAKAKEVGATECV 241
Query: 367 -LIDRNHSLEEISTHI 381
D ++E+ T +
Sbjct: 242 NPQDYKKPIQEVLTEM 257
Score = 32.3 bits (72), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 31/64 (48%), Gaps = 6/64 (9%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF 60
M GIC SD ++ G P+I GHEA+GIV +G V ++ + + +P F
Sbjct: 40 MVATGICRSDDQVVS----GTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGD--KVIPLF 93
Query: 61 RNVC 64
C
Sbjct: 94 TPQC 97
>pdb|3FTN|A Chain A, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|B Chain B, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|C Chain C, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
pdb|3FTN|D Chain D, Q165eS254K DOUBLE MUTANT CHIMERA OF ALCOHOL DEHYDROGENASE
BY EXCHANGE Of The Cofactor Binding Domain Res 153-295
Of T. Brockii Adh By C. Beijerinckii Adh
Length = 352
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
LP + LE ++ + ++ G H A + +GS V++ G G +GL+ + A+ GA R++
Sbjct: 136 LPKEIPLEAAVMIPDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
++ AK GA + N+ I +++L G+ D+ I G T+
Sbjct: 196 GVGSRPICVEAAKFYGATDIL----NYKNGHIVDQVMKLTNGKGVDRVIMAGGGSETL 249
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 8/76 (10%)
Query: 78 REQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGA 137
++KP P D ++ V C SD+H + G IG+ MI+GHEA G V +VG+
Sbjct: 16 EKEKPAPGPFD--AIVRPLAVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGS 70
Query: 138 KVKHLKATRPGGCLVI 153
+VK K PG +V+
Sbjct: 71 EVKDFK---PGDRVVV 83
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 57/251 (22%), Positives = 97/251 (38%), Gaps = 53/251 (21%)
Query: 3 CVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN 62
V C SD+H + G IG+ MI+GHEA G V +VG++VK K ++ VP
Sbjct: 33 AVAPCTSDIHTVFEGAIGE---RHNMILGHEAVGEVVEVGSEVKDFKPGDRV-VVPAITP 88
Query: 63 VCLSPILRRRF---------SLRFREQK--------------------PIEDPDDHEVLL 93
+ ++R + +F K P E P + V++
Sbjct: 89 DWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMI 148
Query: 94 -EMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV 152
+M G G+++ + G S +++G A G++ GAK++ G
Sbjct: 149 PDMMTTGFHGAELADIEMG-------SSVVVIGIGAVGLMGIAGAKLR--------GAGR 193
Query: 153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDT 212
I+G GS+ P+ + K + Y N + + M + V ++I E
Sbjct: 194 IIGVGSR----PICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGGSETL 249
Query: 213 LHAFETAKTGA 223
A + K G
Sbjct: 250 SQAVKMVKPGG 260
>pdb|1JQB|A Chain A, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|B Chain B, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|C Chain C, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
pdb|1JQB|D Chain D, Alcohol Dehydrogenase From Clostridium Beijerinckii:
Crystal Structure Of Mutant With Enhanced Thermal
Stability
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
LP + LE ++ + ++ G H A + +GS V++ G G +GL+ + A+ GA R++
Sbjct: 136 LPKDMPLENAVMITDMMTTGFHGAELADIEMGSSVVVIGIGAVGLMGIAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
++ AK GA + N+ I +++L G+ D+ I G T+
Sbjct: 196 GVGSRPICVEAAKFYGATDIL----NYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETL 249
Score = 38.5 bits (88), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 36/64 (56%), Gaps = 9/64 (14%)
Query: 7 CGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLS 66
C SD+H + G +GD + MI+GHEA G V +VG++VK K ++ VP C +
Sbjct: 37 CTSDIHTVFEGALGDRK---NMILGHEAVGEVVEVGSEVKDFKPGDRV-IVP-----CTT 87
Query: 67 PILR 70
P R
Sbjct: 88 PDWR 91
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 77 FREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVG 136
+++P+ ++ ++ V C SD+H + G +GD + MI+GHEA G V +VG
Sbjct: 15 IEKERPV--AGSYDAIVRPLAVSPCTSDIHTVFEGALGDRK---NMILGHEAVGEVVEVG 69
Query: 137 AKVKHLK 143
++VK K
Sbjct: 70 SEVKDFK 76
>pdb|2B83|A Chain A, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|B Chain B, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|C Chain C, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
pdb|2B83|D Chain D, A Single Amino Acid Substitution In The Clostridium
Beijerinckii Alcohol Dehydrogenase Is Critical For
Thermostabilization
Length = 351
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/198 (24%), Positives = 79/198 (39%), Gaps = 35/198 (17%)
Query: 224 GNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGN-------LSRY 276
G+ +K DRV VPC T + R + A P H N S +
Sbjct: 69 GSEVKDFKPGDRVI----VPCTTPDW---------RSLEVQAGFPQHSNGMLAGWKFSNF 115
Query: 277 -------YRHAADFCHKL---PDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGA 325
Y H D L P + LE ++ + ++ G H A + +GS V++ G
Sbjct: 116 KDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGI 175
Query: 326 GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELL 385
G +GL+ + A+ GA R++ ++ AK GA + N+ I +++L
Sbjct: 176 GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAKFYGATDIL----NYKNGHIVDQVMKLT 231
Query: 386 QGEQPDKTIDCSGIESTI 403
G+ D+ I G T+
Sbjct: 232 NGKGVDRVIMAGGGSETL 249
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 98/246 (39%), Gaps = 51/246 (20%)
Query: 7 CGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF---VPEFRNV 63
C SD+H + G +GD + MI+GHEA G V +VG++VK K ++ P++R++
Sbjct: 37 CTSDIHTVFEGALGDRK---NMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSL 93
Query: 64 CLSP---------ILRRRFSLR----FREQKPIEDPDDHEVLL-------------EMHC 97
+ + +FS F E + D D + +L +M
Sbjct: 94 EVQAGFPQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMT 153
Query: 98 VGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAG 157
G G+++ + G S +++G A G++ GAK++ G I+G G
Sbjct: 154 TGFHGAELADIQMG-------SSVVVIGIGAVGLMGIAGAKLR--------GAGRIIGVG 198
Query: 158 SQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFE 217
S+ P+ + K + Y N + + M + V ++I E A
Sbjct: 199 SR----PICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVS 254
Query: 218 TAKTGA 223
K G
Sbjct: 255 MVKPGG 260
Score = 38.1 bits (87), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 77 FREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVG 136
+++P+ ++ ++ V C SD+H + G +GD + MI+GHEA G V +VG
Sbjct: 15 IEKERPVAG--SYDAIVRPLAVSPCTSDIHTVFEGALGDRK---NMILGHEAVGEVVEVG 69
Query: 137 AKVKHLK 143
++VK K
Sbjct: 70 SEVKDFK 76
>pdb|1PED|A Chain A, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|B Chain B, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|C Chain C, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1PED|D Chain D, Bacterial Secondary Alcohol Dehydrogenase (Apo-Form)
pdb|1KEV|A Chain A, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|B Chain B, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|C Chain C, Structure Of Nadp-Dependent Alcohol Dehydrogenase
pdb|1KEV|D Chain D, Structure Of Nadp-Dependent Alcohol Dehydrogenase
Length = 351
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 287 LPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVV 345
LP + LE ++ + ++ G H A + +GS V++ G G +GL+ + A+ GA R++
Sbjct: 136 LPKDMPLENAVMITDMMTTGFHGAELADIQMGSSVVVIGIGAVGLMGIAGAKLRGAGRII 195
Query: 346 ITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403
++ AK GA + N+ I +++L G+ D+ I G T+
Sbjct: 196 GVGSRPICVEAAKFYGATDIL----NYKNGHIVDQVMKLTNGKGVDRVIMAGGGSETL 249
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/246 (22%), Positives = 99/246 (40%), Gaps = 51/246 (20%)
Query: 7 CGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF---VPEFRNV 63
C SD+H + G +GD + MI+GHEA G V +VG++VK K ++ P++R++
Sbjct: 37 CTSDIHTVFEGALGDRK---NMILGHEAVGEVVEVGSEVKDFKPGDRVIVPCTTPDWRSL 93
Query: 64 CLSPILRR---------RFSLR----FREQKPIEDPDDHEVLL-------------EMHC 97
+ ++ +FS F E + D D + +L +M
Sbjct: 94 EVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAILPKDMPLENAVMITDMMT 153
Query: 98 VGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAG 157
G G+++ + G S +++G A G++ GAK++ G I+G G
Sbjct: 154 TGFHGAELADIQMG-------SSVVVIGIGAVGLMGIAGAKLR--------GAGRIIGVG 198
Query: 158 SQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFE 217
S+ P+ + K + Y N + + M + V ++I E A
Sbjct: 199 SR----PICVEAAKFYGATDILNYKNGHIVDQVMKLTNGKGVDRVIMAGGGSETLSQAVS 254
Query: 218 TAKTGA 223
K G
Sbjct: 255 MVKPGG 260
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 77 FREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVG 136
+++P+ ++ ++ V C SD+H + G +GD + MI+GHEA G V +VG
Sbjct: 15 IEKERPV--AGSYDAIVRPLAVSPCTSDIHTVFEGALGDRK---NMILGHEAVGEVVEVG 69
Query: 137 AKVKHLK 143
++VK K
Sbjct: 70 SEVKDFK 76
>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase
pdb|1KOL|B Chain B, Crystal Structure Of Formaldehyde Dehydrogenase
Length = 398
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 75/189 (39%), Gaps = 30/189 (15%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHA------------- 280
D V++ V C C CKE +C P G Y
Sbjct: 87 DLVSVPFNVACGRCRSCKEMHTGVC----LTVNPARAGGAYGYVDMGDWTGGQAEYVLVP 142
Query: 281 -ADF-CHKLPDHVSLEEG-----ALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTL 333
ADF KLPD E L + L G H AGV GS V + GAGP+GL
Sbjct: 143 YADFNLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAA 202
Query: 334 LTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEE-ISTHIIELLQGEQPDK 392
+AR LGA+ V++ D+ +L AK G + L SL+ + I LL + D
Sbjct: 203 ASARLLGAAVVIVGDLNPARLAHAKAQGFEIADL-----SLDTPLHEQIAALLGEPEVDC 257
Query: 393 TIDCSGIES 401
+D G E+
Sbjct: 258 AVDAVGFEA 266
Score = 32.7 bits (73), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%), Gaps = 10/69 (14%)
Query: 78 REQKPIEDPDDHEVLLEMHCVGICGSDVHYL---THGQIGDFRLSDPMIVGHEASGIVSK 134
+ Q P +H V+L++ ICGSD H + T Q+G +++GHE +G V +
Sbjct: 23 KMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG-------LVLGHEITGEVIE 75
Query: 135 VGAKVKHLK 143
G V++L+
Sbjct: 76 KGRDVENLQ 84
>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0C|B Chain B, Crystal Structure Of The Nadp(H)-Dependent Vertebrate
Alcohol Dehydrogenase (Adh8)
pdb|1P0F|A Chain A, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
pdb|1P0F|B Chain B, Crystal Structure Of The Binary Complex: Nadp(H)-Dependent
Vertebrate Alcohol Dehydrogenase (Adh8) With The
Cofactor Nadp
Length = 373
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 4/65 (6%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
E + P HEV +++ GICGSD L F P+I+GHEA G+V +GA
Sbjct: 25 ETITVAPPKAHEVRIKILASGICGSDSSVLKEIIPSKF----PVILGHEAVGVVESIGAG 80
Query: 139 VKHLK 143
V +K
Sbjct: 81 VTCVK 85
Score = 36.2 bits (82), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 31/57 (54%), Gaps = 6/57 (10%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVPE 59
GICGSD L F P+I+GHEA G+V +GA V +K ++ FVP+
Sbjct: 45 GICGSDSSVLKEIIPSKF----PVILGHEAVGVVESIGAGVTCVKPGDKVIPLFVPQ 97
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 64/176 (36%), Gaps = 24/176 (13%)
Query: 244 CRTCTYCKEGRYNLCRQI---------------FFCATPPDHG-----NLSRYYRHAADF 283
C +C CK N C + F C P + + Y A
Sbjct: 98 CGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIA 157
Query: 284 CHKLPDHVSLEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGAS 342
K+ LE + + G A A VT GS + G G +G ++ +A GAS
Sbjct: 158 VAKIDPKAPLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGAS 217
Query: 343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
R++ + K A E+G AT ++ + I I E G D ++C+G
Sbjct: 218 RIIGVGTHKDKFPKAIELG--ATECLNPKDYDKPIYEVICEKTNGGV-DYAVECAG 270
>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1TEH|B Chain B, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A
Glutathione- Dependent Formaldehyde Dehydrogenase)
pdb|1M6H|A Chain A, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6H|B Chain B, Human Glutathione-Dependent Formaldehyde Dehydrogenase
pdb|1M6W|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1M6W|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase And 12-Hydroxydodecanoic Acid
pdb|1MA0|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MA0|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With Nad+ And Dodecanoic Acid
pdb|1MP0|A Chain A, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|1MP0|B Chain B, Binary Complex Of Human Glutathione-Dependent Formaldehyde
Dehydrogenase With Nad(H)
pdb|2FZE|A Chain A, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
pdb|2FZE|B Chain B, Crystal Structure Of The Binary Complex Of Human
Glutathione-Dependent Formaldehyde Dehydrogenase With
Adp- Ribose
Length = 373
Score = 42.4 bits (98), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATP---PD-------HGNLSRYYRHAADFC-HKLPDHVS 292
C C +C + NLC++I PD G +Y + F + + +S
Sbjct: 96 CGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS 155
Query: 293 LEEGALLEPL----------SVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
+ + L PL S G A A + GS + G G +GL ++ + GA
Sbjct: 156 VAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGA 215
Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
SR++ DI + K AKE G AT I+ + I +IE+ G D + +C G
Sbjct: 216 SRIIGVDINKDKFARAKEFG--ATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 269
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
E+ + P HEV +++ +C +D + L+ D P+I+GHE +GIV VG
Sbjct: 22 EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA---DPEGCFPVILGHEGAGIVESVGEG 78
Query: 139 VKHLKA 144
V LKA
Sbjct: 79 VTKLKA 84
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 6 ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVPEFR-- 61
+C +D + L+ D P+I+GHE +GIV VG V LK + ++P+
Sbjct: 43 VCHTDAYTLSGA---DPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGEC 99
Query: 62 NVCLSP 67
CL+P
Sbjct: 100 KFCLNP 105
>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1Q1N|A Chain A, Apo And Holo Structures Of An Nadp(h)-dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|A Chain A, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
pdb|1PIW|B Chain B, Apo And Holo Structures Of An Nadp(H)-Dependent Cinnamyl
Alcohol Dehydrogenase From Saccharomyces Cerevisiae
Length = 360
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 33/51 (64%), Gaps = 3/51 (5%)
Query: 88 DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
DH++ +++ G+CGSD+H G G+ ++ P++VGHE G V K+G K
Sbjct: 33 DHDIDIKIEACGVCGSDIH-CAAGHWGNMKM--PLVVGHEIVGKVVKLGPK 80
Score = 36.2 bits (82), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 3/40 (7%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 44
G+CGSD+H G G+ ++ P++VGHE G V K+G K
Sbjct: 44 GVCGSDIH-CAAGHWGNMKM--PLVVGHEIVGKVVKLGPK 80
Score = 28.5 bits (62), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 28/137 (20%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATPP------DHGNLSRYYRHAADFCHKLPDHVSLEEGA 297
C C CK C + + P G + Y R F +P+++
Sbjct: 100 CLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIP---SH 156
Query: 298 LLEPLSVGVHACRRAGVTLGSKVLITGAGP-----------IGLVTLLTARALGASRVVI 346
L PL G G+T+ S ++ G GP IG + L ++A+GA VI
Sbjct: 157 LAAPLLCG-------GLTVYSPLVRNGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVI 209
Query: 347 TDILEHKLKTAKEMGAD 363
+ K + A +MGAD
Sbjct: 210 SR-SSRKREDAMKMGAD 225
>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
pdb|1MC5|B Chain B, Ternary Complex Of Human Glutathione-Dependent
Formaldehyde Dehydrogenase With
S-(Hydroxymethyl)glutathione And Nadh
Length = 374
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATP---PD-------HGNLSRYYRHAADFC-HKLPDHVS 292
C C +C + NLC++I PD G +Y + F + + +S
Sbjct: 97 CGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS 156
Query: 293 LEEGALLEPL----------SVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
+ + L PL S G A A + GS + G G +GL ++ + GA
Sbjct: 157 VAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
SR++ DI + K AKE G AT I+ + I +IE+ G D + +C G
Sbjct: 217 SRIIGVDINKDKFARAKEFG--ATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 270
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
E+ + P HEV +++ +C +D + L+ D P+I+GHE +GIV VG
Sbjct: 23 EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA---DPEGCFPVILGHEGAGIVESVGEG 79
Query: 139 VKHLKA 144
V LKA
Sbjct: 80 VTKLKA 85
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 6 ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVPEFR-- 61
+C +D + L+ D P+I+GHE +GIV VG V LK + ++P+
Sbjct: 44 VCHTDAYTLSGA---DPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGEC 100
Query: 62 NVCLSP 67
CL+P
Sbjct: 101 KFCLNP 106
>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
pdb|3QJ5|B Chain B, S-Nitrosoglutathione Reductase (Gsnor) In Complex With
N6022
Length = 374
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATP---PD-------HGNLSRYYRHAADFC-HKLPDHVS 292
C C +C + NLC++I PD G +Y + F + + +S
Sbjct: 97 CGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS 156
Query: 293 LEEGALLEPL----------SVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
+ + L PL S G A A + GS + G G +GL ++ + GA
Sbjct: 157 VAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGA 216
Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
SR++ DI + K AKE G AT I+ + I +IE+ G D + +C G
Sbjct: 217 SRIIGVDINKDKFARAKEFG--ATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 270
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 3/66 (4%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
E+ + P HEV +++ +C +D + L+ D P+I+GHE +GIV VG
Sbjct: 23 EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA---DPEGCFPVILGHEGAGIVESVGEG 79
Query: 139 VKHLKA 144
V LKA
Sbjct: 80 VTKLKA 85
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 7/66 (10%)
Query: 6 ICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQT--RFVPEFR-- 61
+C +D + L+ D P+I+GHE +GIV VG V LK + ++P+
Sbjct: 44 VCHTDAYTLSGA---DPEGCFPVILGHEGAGIVESVGEGVTKLKAGDTVIPLYIPQCGEC 100
Query: 62 NVCLSP 67
CL+P
Sbjct: 101 KFCLNP 106
>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
pdb|2FZW|B Chain B, Structure Of The Binary Complex Of The E67l Mutant Of
Human Glutathione-Dependent Formaldehyde Dehydrogenase
With Nad(H)
Length = 373
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 47/177 (26%), Positives = 73/177 (41%), Gaps = 25/177 (14%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATP---PD-------HGNLSRYYRHAADFC-HKLPDHVS 292
C C +C + NLC++I PD G +Y + F + + +S
Sbjct: 96 CGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADIS 155
Query: 293 LEEGALLEPL----------SVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGA 341
+ + L PL S G A A + GS + G G +GL ++ + GA
Sbjct: 156 VAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGA 215
Query: 342 SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
SR++ DI + K AKE G AT I+ + I +IE+ G D + +C G
Sbjct: 216 SRIIGVDINKDKFARAKEFG--ATECINPQDFSKPIQEVLIEMTDG-GVDYSFECIG 269
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%), Gaps = 3/66 (4%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
E+ + P HEV +++ +C +D + L+ D P+I+GH +GIV VG
Sbjct: 22 EEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGA---DPEGCFPVILGHLGAGIVESVGEG 78
Query: 139 VKHLKA 144
V LKA
Sbjct: 79 VTKLKA 84
>pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
pdb|1QOR|B Chain B, Crystal Structure Of Escherichia Coli Quinone
Oxidoreductase Complexed With Nadph
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 85 DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA 144
DP ++E+ +E +GI D Y+ G L P +G EA+GIVSKVG+ VKH+KA
Sbjct: 25 DPAENEIQVENKAIGINFIDT-YIRSGLYPPPSL--PSGLGTEAAGIVSKVGSGVKHIKA 81
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 23/32 (71%)
Query: 25 SDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF 56
S P +G EA+GIVSKVG+ VKH+K ++ +
Sbjct: 56 SLPSGLGTEAAGIVSKVGSGVKHIKAGDRVVY 87
>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|C Chain C, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|D Chain D, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|E Chain E, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
pdb|3I4C|H Chain H, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh)
Double Mutant (W95l,N249y)
Length = 347
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD------PMIVGHEASGIVSKVG 136
+ P +VL+++ G+C SDVH + G+ G+ R+ + P+ +GHE +G + +VG
Sbjct: 20 VPKPKGPQVLIKVEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG 78
Query: 137 AKV 139
+V
Sbjct: 79 DEV 81
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSD------PMIVGHEASGIVSKVGAKV 45
+ G+C SDVH + G+ G+ R+ + P+ +GHE +G + +VG +V
Sbjct: 32 VEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEV 81
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 5/173 (2%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
D VA+ P C YC+ G +LC + D + +KL ++
Sbjct: 88 DLVAVNPLQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAV 147
Query: 294 EEGALLEPLSVGVHACRRAGV-TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH 352
E L A R+A + + +++ G +G + + A+A+ + ++ D+ E
Sbjct: 148 EAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE 207
Query: 353 KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
++ AK GAD + N S+++ I + + + D ID + E T+ +
Sbjct: 208 AVEAAKRAGADYVI----NASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSV 256
>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|B Chain B, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|C Chain C, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|D Chain D, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|E Chain E, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NTO|H Chain H, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon
Sulfolobus Solfataricus-Monoclinic Crystal Form
pdb|1NVG|A Chain A, N249y Mutant Of The Alcohol Dehydrogenase From The
Archaeon Sulfolobus Solfataricus-tetragonal Crystal Form
Length = 347
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD------PMIVGHEASGIVSKVG 136
+ P +VL+++ G+C SDVH + G+ G+ R+ + P+ +GHE +G + +VG
Sbjct: 20 VPKPKGPQVLIKVEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG 78
Query: 137 AKV 139
+V
Sbjct: 79 DEV 81
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSD------PMIVGHEASGIVSKVGAKV 45
+ G+C SDVH + G+ G+ R+ + P+ +GHE +G + +VG +V
Sbjct: 32 VEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEV 81
Score = 33.5 bits (75), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 5/173 (2%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
D VA+ P C YC+ G +LC + D + +KL ++
Sbjct: 88 DLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAV 147
Query: 294 EEGALLEPLSVGVHACRRAGV-TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH 352
E L A R+A + + +++ G +G + + A+A+ + ++ D+ E
Sbjct: 148 EAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE 207
Query: 353 KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
++ AK GAD + N S+++ I + + + D ID + E T+ +
Sbjct: 208 AVEAAKRAGADYVI----NASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSV 256
>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
pdb|1R37|B Chain B, Alcohol Dehydrogenase From Sulfolobus Solfataricus
Complexed With Nad(H) And 2-Ethoxyethanol
Length = 347
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 7/63 (11%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD------PMIVGHEASGIVSKVG 136
+ P +VL+++ G+C SDVH + G+ G+ R+ + P+ +GHE +G + +VG
Sbjct: 20 VPKPKGPQVLIKVEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG 78
Query: 137 AKV 139
+V
Sbjct: 79 DEV 81
Score = 34.7 bits (78), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 72/173 (41%), Gaps = 5/173 (2%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
D VA+ P C YC+ G +LC + D + +KL ++
Sbjct: 88 DLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKLRRLNAV 147
Query: 294 EEGALLEPLSVGVHACRRAGV-TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH 352
E L A R+A + + +++ G +G + + A+A+ + ++ D+ E
Sbjct: 148 EAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE 207
Query: 353 KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
++ AK GAD + N S+++ I + + + D ID + E T+ +
Sbjct: 208 AVEAAKRAGADYVI----NASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSV 256
Score = 34.3 bits (77), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%), Gaps = 7/51 (13%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSD------PMIVGHEASGIVSKVGAKV 45
+ G+C SDVH + G+ G+ R+ + P+ +GHE +G + +VG +V
Sbjct: 32 VEAAGVCHSDVH-MRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEV 81
>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From
Sulfolobus Solfataricus
Length = 344
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 77/173 (44%), Gaps = 20/173 (11%)
Query: 246 TCTYCKEGRYNLCR-QIFFCATPPDHGNLSRYYR-HAADFCHKLPDHVSLEEGALLEPLS 303
TC YC+EG++N+C+ QI T +G S Y ++ + KL +E L + +
Sbjct: 96 TCRYCREGKFNICKNQIIPGQTT--NGGFSEYMLVKSSRWLVKLNSLSPVEAAPLADAGT 153
Query: 304 VGVHACRRAGVTLGSK-----VLITGAGPIGLVTLLTARALGASRVVITDILEHK--LKT 356
+ A R+A + SK V++ G G + + T+ +AL + I I K
Sbjct: 154 TSMGAIRQA-LPFISKFAEPVVIVNGIGGLAVYTIQILKAL-MKNITIVGISRSKKHRDF 211
Query: 357 AKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGI-ESTIKLGML 408
A E+GAD +++ + I +L G ID G E+T LG L
Sbjct: 212 ALELGADYV------SEMKDAESLINKLTDGLGASIAIDLVGTEETTYNLGKL 258
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 39/74 (52%), Gaps = 10/74 (13%)
Query: 76 RFREQKPIED-----PDDHEVLLEMHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEAS 129
+F E IED P EVL+ + G+C +D+ + FRL P+I+GHE +
Sbjct: 11 KFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRL--PIILGHENA 68
Query: 130 GIVSKVG--AKVKH 141
G + +VG AKVK
Sbjct: 69 GTIVEVGELAKVKK 82
Score = 29.3 bits (64), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%), Gaps = 3/49 (6%)
Query: 5 GICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKVDN 52
G+C +D+ + FRL P+I+GHE +G + +VG K K DN
Sbjct: 39 GVCRTDLRVWKGVEAKQGFRL--PIILGHENAGTIVEVGELAKVKKGDN 85
>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus
Solfataricus
Length = 347
Score = 39.7 bits (91), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 7/63 (11%)
Query: 83 IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD------PMIVGHEASGIVSKVG 136
+ P +VL+++ G+C SDVH G+ G+ R+ + P+ +GHE +G + +VG
Sbjct: 20 VPKPKGPQVLIKVEAAGVCHSDVH-XRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVG 78
Query: 137 AKV 139
+V
Sbjct: 79 DEV 81
Score = 33.1 bits (74), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 7/51 (13%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLSD------PMIVGHEASGIVSKVGAKV 45
+ G+C SDVH G+ G+ R+ + P+ +GHE +G + +VG +V
Sbjct: 32 VEAAGVCHSDVH-XRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEV 81
Score = 32.3 bits (72), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 37/173 (21%), Positives = 71/173 (41%), Gaps = 5/173 (2%)
Query: 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
D VA+ P C YC+ G +LC + D + +KL ++
Sbjct: 88 DLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYXYKLRRLNAV 147
Query: 294 EEGALLEPLSVGVHACRRAGV-TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH 352
E L A R+A + + +++ G +G + A+A+ + ++ D+ E
Sbjct: 148 EAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGATIIGVDVREE 207
Query: 353 KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405
++ AK GAD + N S+++ I + + + D ID + E T+ +
Sbjct: 208 AVEAAKRAGADYVI----NASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSV 256
>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
pdb|1CDO|B Chain B, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed
With Nicotinamide Adenine Dinucleotide (Nad), And Zinc
Length = 374
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 3/91 (3%)
Query: 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVL 367
A A V GS + G G +GL ++ + GA R++ D+ K + AK G AT
Sbjct: 184 AVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAKVFG--ATDF 241
Query: 368 IDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
++ N E IS + ++ G D +++C G
Sbjct: 242 VNPNDHSEPISQVLSKMTNGGV-DFSLECVG 271
Score = 38.5 bits (88), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/83 (24%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 68 ILRRRFSLRFREQKP-------IEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSD 120
+++ + ++ + KP ++ P +E+ +++ G+C +D+++L G+ D
Sbjct: 6 VIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKD---GF 62
Query: 121 PMIVGHEASGIVSKVGAKVKHLK 143
P+++GHE +GIV VG V +
Sbjct: 63 PVVLGHEGAGIVESVGPGVTEFQ 85
Score = 34.3 bits (77), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 5/60 (8%)
Query: 5 GICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC 64
G+C +D+++L G+ D P+++GHE +GIV VG V + + +P F + C
Sbjct: 44 GVCHTDLYHLFEGKHKD---GFPVVLGHEGAGIVESVGPGVTEFQPGE--KVIPLFISQC 98
>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|B Chain B, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|C Chain C, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
pdb|2HCY|D Chain D, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae
Fermentative Enzyme
Length = 347
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 35/64 (54%), Gaps = 6/64 (9%)
Query: 82 PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRL--SDPMIVGHEASGIVSKVGAKV 139
P+ P +E+L+ + G+C +D+H GD+ L P++ GHE +G+V +G V
Sbjct: 24 PVPKPKANELLINVKYSGVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVVGMGENV 79
Query: 140 KHLK 143
K K
Sbjct: 80 KGWK 83
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 28/50 (56%), Gaps = 6/50 (12%)
Query: 5 GICGSDVHYLTHGQIGDFRL--SDPMIVGHEASGIVSKVGAKVKHLKVDN 52
G+C +D+H GD+ L P++ GHE +G+V +G VK K+ +
Sbjct: 41 GVCHTDLHAWH----GDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIGD 86
>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
pdb|3TWO|B Chain B, The Crystal Structure Of Cad From Helicobacter Pylori
Complexed With Nadp(H)
Length = 348
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 55/127 (43%), Gaps = 10/127 (7%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCA--------TPPDHGNLSRYYRHAADFCHKLPDHVSLEE 295
C+ C CKE + C ++ F P G S ++ + + LE+
Sbjct: 95 CKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEK 154
Query: 296 GALLEPLSVGVHA-CRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKL 354
A L + ++ + + VT G+KV + G G +G + + A A+GA V + EHK
Sbjct: 155 VAPLLCAGITTYSPLKFSKVTKGTKVGVAGFGGLGSMAVKYAVAMGA-EVSVFARNEHKK 213
Query: 355 KTAKEMG 361
+ A MG
Sbjct: 214 QDALSMG 220
Score = 37.4 bits (85), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 90 EVLLEMHCVGICGSDVHY-LTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLK 143
+VL+++ GIC SD+H + + G + PMI GHE +GI+ +VG VK K
Sbjct: 31 DVLIDILYAGICHSDIHSAYSEWKEGIY----PMIPGHEIAGIIKEVGKGVKKFK 81
Score = 34.7 bits (78), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 5/47 (10%)
Query: 5 GICGSDVHY-LTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKV 50
GIC SD+H + + G + PMI GHE +GI+ +VG VK K+
Sbjct: 40 GICHSDIHSAYSEWKEGIY----PMIPGHEIAGIIKEVGKGVKKFKI 82
>pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWA|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
pdb|3QWB|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|B Chain B, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|C Chain C, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
pdb|3QWB|D Chain D, Crystal Structure Of Saccharomyces Cerevisiae
Zeta-Crystallin-Like Quinone Oxidoreductase Zta1
Complexed With Nadph
Length = 334
Score = 37.0 bits (84), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 286 KLPDHVSLEE-----GALLEPLSVGVHACRRAGVTLGSKVLI-TGAGPIGLVTLLTARAL 339
KLP S EE LL+ L+ V G VL+ AG +GL+ +
Sbjct: 113 KLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMK 172
Query: 340 GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398
GA + + + KLK AKE GA+ + N S E+I +++ G+ D + D G
Sbjct: 173 GAHTIAVAST-DEKLKIAKEYGAEYLI----NASKEDILRQVLKFTNGKGVDASFDSVG 226
>pdb|2B5W|A Chain A, Crystal Structure Of D38c Glucose Dehydrogenase Mutant
From Haloferax Mediterranei
Length = 357
Score = 37.0 bits (84), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 30/53 (56%)
Query: 80 QKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIV 132
+KP +P+ E L+ VG+CG+D + G G D +++GHEA G+V
Sbjct: 17 EKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV 69
Score = 29.3 bits (64), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 21/35 (60%)
Query: 4 VGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIV 38
VG+CG+D + G G D +++GHEA G+V
Sbjct: 35 VGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV 69
>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQD|B Chain B, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+
pdb|1YQX|A Chain A, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
pdb|1YQX|B Chain B, Sinapyl Alcohol Dehydrogenase At 2.5 Angstrom Resolution
Length = 366
Score = 35.0 bits (79), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 5/70 (7%)
Query: 88 DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLS-DPMIVGHEASGIVSKVGAKVKHLKATR 146
+ +V ++ G+C SD+H + + D+ S P++ GHE G V++VG+KVK +
Sbjct: 41 EEDVRFKVLYCGVCHSDLHSIKN----DWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGD 96
Query: 147 PGGCLVIVGA 156
G +VGA
Sbjct: 97 KVGVGCLVGA 106
Score = 34.7 bits (78), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 35/54 (64%), Gaps = 6/54 (11%)
Query: 1 MHCVGICGSDVHYLTHGQIGDFRLS-DPMIVGHEASGIVSKVGAKVKHLKVDNQ 53
++C G+C SD+H + + D+ S P++ GHE G V++VG+KVK + V ++
Sbjct: 49 LYC-GVCHSDLHSIKN----DWGFSMYPLVPGHEIVGEVTEVGSKVKKVNVGDK 97
>pdb|3GOH|A Chain A, Crystal Structure Of Alcohol Dehydrogenase Superfamily
Protein (np_718042.1) From Shewanella Oneidensis At 1.55
A Resolution
Length = 315
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 1/73 (1%)
Query: 257 LCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVT 315
L R++ + + HG+ + + D LPD++S E A L PL A + +T
Sbjct: 82 LGRRVAYHTSLKRHGSFAEFTVLNTDRVXTLPDNLSFERAAALPCPLLTAWQAFEKIPLT 141
Query: 316 LGSKVLITGAGPI 328
+VLI G G +
Sbjct: 142 KQREVLIVGFGAV 154
>pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase
Length = 333
Score = 33.1 bits (74), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 11/121 (9%)
Query: 27 PMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSLRFREQKPIEDP 86
P++VG EA+ +V +VG V V + CL P+ + +K I+ P
Sbjct: 61 PIVVGFEAAAVVEEVGPGVTDFTVGERV-------CTCLPPLGAYSQERLYPAEKLIKVP 113
Query: 87 DDHEVLLEMHCVGIC--GSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA 144
D + L ++H G+ G YL H Q + D +++ A G+ + +HL A
Sbjct: 114 KDLD-LDDVHLAGLMLKGMTAQYLLH-QTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA 171
Query: 145 T 145
T
Sbjct: 172 T 172
>pdb|2B5V|A Chain A, Crystal Structure Of Glucose Dehydrogenase From Haloferax
Mediterranei
pdb|2VWG|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Gluconolactone.
pdb|2VWH|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp, Zn And Glucose.
pdb|2VWP|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadph And Zn.
pdb|2VWQ|A Chain A, Haloferax Mediterranei Glucose Dehydrogenase In Complex
With Nadp And Zn
Length = 357
Score = 32.7 bits (73), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 29/53 (54%)
Query: 80 QKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIV 132
+KP +P+ E L+ VG+ G+D + G G D +++GHEA G+V
Sbjct: 17 EKPRPEPESGEALVRTLRVGVDGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV 69
>pdb|2AL2|A Chain A, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
Length = 436
Score = 31.6 bits (70), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H +V I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKVKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLAVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|3GMS|A Chain A, Crystal Structure Of Putative Nadph:quinone Reductase From
Bacillus Thuringiensis
Length = 340
Score = 31.6 bits (70), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 2/61 (3%)
Query: 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAK 138
E K IE D+EV + M I SD+ +T R+ P I G+E GIV VGA
Sbjct: 23 EYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYA--HRIPLPNIPGYEGVGIVENVGAF 80
Query: 139 V 139
V
Sbjct: 81 V 81
>pdb|2XH2|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
pdb|2XH2|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
pdb|2XH2|C Chain C, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
pdb|2XH2|D Chain D, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321a Mutant Of Yeast Enolase 1
Length = 443
Score = 31.2 bits (69), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H ++ I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKIKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADAL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|2XH7|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The D321a Mutant Of Yeast Enolase 1
pdb|2XH7|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The D321a Mutant Of Yeast Enolase 1
Length = 443
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H ++ I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKIKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADAL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|2XH4|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
pdb|2XH4|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
pdb|2XH4|C Chain C, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
pdb|2XH4|D Chain D, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39a D321a Mutant Of Yeast Enolase 1
Length = 443
Score = 31.2 bits (69), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H ++ I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKIKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADAL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|2AL2|B Chain B, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
Length = 436
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H +V I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKVKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|1P48|A Chain A, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
pdb|1P48|B Chain B, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
Length = 436
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H +V I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKVKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|1P43|A Chain A, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
pdb|1P43|B Chain B, Reverse Protonation Is The Key To General Acid-Base
Catalysis In Enolase
Length = 436
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H +V I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKVKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol
Dehydrogenase-Like Protein Yahk
Length = 369
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 18/88 (20%)
Query: 77 FREQKPIE-------DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEAS 129
+ ++P+E +P ++V +E+ G+C SD+H + G P + GHE
Sbjct: 29 YSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVY---PCVPGHEIV 85
Query: 130 GIVSKVGAKVKHLKATRPG-----GCLV 152
G V VG +V+ PG GC+V
Sbjct: 86 GRVVAVGDQVEKYA---PGDLVGVGCIV 110
>pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
pdb|2X7H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Fenoprofen
Length = 370
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 72 RFSLRFREQK------PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVG 125
R S FRE P+ P D ++L+ VG+ SD++Y + G+ D + P +G
Sbjct: 39 RLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINY-SAGRY-DPSVKPPFDIG 96
Query: 126 HEASGIVSKVG 136
E G V +G
Sbjct: 97 FEGIGEVVALG 107
>pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
pdb|2WEK|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Diclofenac
Length = 341
Score = 30.8 bits (68), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 72 RFSLRFREQK------PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVG 125
R S FRE P+ P D ++L+ VG+ SD++Y + G+ D + P +G
Sbjct: 10 RLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINY-SAGRY-DPSVKPPFDIG 67
Query: 126 HEASGIVSKVG 136
E G V +G
Sbjct: 68 FEGIGEVVALG 78
>pdb|1ELS|A Chain A, Catalytic Metal Ion Binding In Enolase: The Crystal
Structure Of Enolase-Mn2+-Phosphonoacetohydroxamate
Complex At 2.4 Angstroms Resolution
pdb|1NEL|A Chain A, Fluoride Inhibition Of Yeast Enolase: Crystal Structure Of
The Enolase-mg2+-f--pi Complex At 2.6-angstroms
Resolution
pdb|3ENL|A Chain A, Refined Structure Of Yeast Apo-Enolase At 2.25 Angstroms
Resolution
pdb|4ENL|A Chain A, Crystal Structure Of Holoenzyme Refined At 1.9 Angstroms
Resolution: Trigonal-Bipyramidal Geometry Of The Cation
Binding Site
pdb|5ENL|A Chain A, Inhibition Of Enolase: The Crystal Structures Of Enolase-
Ca2+-Phosphoglycerate And Enolase-Zn2+-Phosphoglycolate
Complexes At 2.2-Angstroms Resolution
pdb|6ENL|A Chain A, Inhibition Of Enolase: The Crystal Structures Of Enolase-
Ca2+-Phosphoglycerate And Enolase-Zn2+-Phosphoglycolate
Complexes At 2.2-Angstroms Resolution
pdb|7ENL|A Chain A, Mechanism Of Enolase: The Crystal Structure Of
Enolase-Mg2+- Phosphoglycerate(Slash)
Phosphoenolpyruvate Complex At 2.2-Angstroms Resolution
Length = 436
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H +V I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKVKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product
pdb|2C0C|B Chain B, Structure Of The Mgc45594 Gene Product
pdb|2X1H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
pdb|2X1H|B Chain B, Crystal Structure Of The Human Mgc45594 Gene Product In
Complex With Raloxifene
Length = 362
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 72 RFSLRFREQK------PIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVG 125
R S FRE P+ P D ++L+ VG+ SD++Y + G+ D + P +G
Sbjct: 31 RLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINY-SAGRY-DPSVKPPFDIG 88
Query: 126 HEASGIVSKVG 136
E G V +G
Sbjct: 89 FEGIGEVVALG 99
>pdb|1EBG|A Chain A, Chelation Of Ser 39 To Mg2+ Latches A Gate At The Active
Site Of Enolase: Structure Of The Bis(Mg2+) Complex Of
Yeast Enolase And The Intermediate Analog
Phosphonoacetohydroxamate At 2.1 Angstroms Resolution
pdb|1EBG|B Chain B, Chelation Of Ser 39 To Mg2+ Latches A Gate At The Active
Site Of Enolase: Structure Of The Bis(Mg2+) Complex Of
Yeast Enolase And The Intermediate Analog
Phosphonoacetohydroxamate At 2.1 Angstroms Resolution
pdb|1EBH|A Chain A, Octahedral Coordination At The High Affinity Metal Site In
Enolase; Crystallographic Analysis Of The Mg++-Enzyme
From Yeast At 1.9 Angstroms Resolution
pdb|1EBH|B Chain B, Octahedral Coordination At The High Affinity Metal Site In
Enolase; Crystallographic Analysis Of The Mg++-Enzyme
From Yeast At 1.9 Angstroms Resolution
pdb|1ONE|A Chain A, Yeast Enolase Complexed With An Equilibrium Mixture Of 2'-
Phosphoglyceate And Phosphoenolpyruvate
pdb|1ONE|B Chain B, Yeast Enolase Complexed With An Equilibrium Mixture Of 2'-
Phosphoglyceate And Phosphoenolpyruvate
pdb|2ONE|A Chain A, Asymmetric Yeast Enolase Dimer Complexed With Resolved 2'-
Phosphoglycerate And Phosphoenolpyruvate
pdb|2ONE|B Chain B, Asymmetric Yeast Enolase Dimer Complexed With Resolved 2'-
Phosphoglycerate And Phosphoenolpyruvate
pdb|2AL1|A Chain A, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
pdb|2AL1|B Chain B, Crystal Structure Analysis Of Enolase Mg Subunit Complex
At Ph 8.0
Length = 436
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H +V I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKVKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|1L8P|A Chain A, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast Enolase
1
pdb|1L8P|B Chain B, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast Enolase
1
pdb|1L8P|C Chain C, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast Enolase
1
pdb|1L8P|D Chain D, Mg-phosphonoacetohydroxamate Complex Of S39a Yeast Enolase
1
Length = 436
Score = 30.8 bits (68), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H +V I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKVKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADDL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|4DIO|A Chain A, The Crystal Structure Of Transhydrogenase From
Sinorhizobium Meliloti
pdb|4DIO|B Chain B, The Crystal Structure Of Transhydrogenase From
Sinorhizobium Meliloti
Length = 405
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
Query: 312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRN 371
AG +K+ + GAG GL + TAR LGA V TD+ + +GA + D
Sbjct: 185 AGTVPAAKIFVXGAGVAGLQAIATARRLGAV-VSATDVRPAAKEQVASLGAKFIAVEDEE 243
Query: 372 HSLEEISTHIIELLQGE 388
E + + GE
Sbjct: 244 FKAAETAGGYAKEXSGE 260
>pdb|2XGZ|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321r Mutant Of Yeast Enolase 1
pdb|2XGZ|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n D321r Mutant Of Yeast Enolase 1
Length = 443
Score = 30.4 bits (67), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H ++ I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKIKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADRL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|2XH0|A Chain A, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
pdb|2XH0|B Chain B, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
pdb|2XH0|C Chain C, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
pdb|2XH0|D Chain D, Engineering The Enolase Active Site Pocket: Crystal
Structure Of The S39n Q167k D321r Mutant Of Yeast
Enolase 1
Length = 443
Score = 30.0 bits (66), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 74/170 (43%), Gaps = 17/170 (10%)
Query: 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYR--HAAD 282
+AIK H ++ I G+ C + + K+G+Y+L + P + + S++ AD
Sbjct: 230 DAIKAAGHDGKIKI--GLDCASSEFFKDGKYDLDFK-----NP--NSDKSKWLTGPQLAD 280
Query: 283 FCHKLPDH---VSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARAL 339
H L VS+E+ + H + AG+ + + L T P + T + +A
Sbjct: 281 LYHSLMKRYPIVSIEDPFAEDDWEAWSHFFKTAGIQIVADRL-TVTNPKRIATAIEKKAA 339
Query: 340 GASRVVITDI--LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387
A + + I L +K A++ A ++ + S E T I +L+ G
Sbjct: 340 DALLLKVNQIGTLSESIKAAQDSFAAGWGVMVSHRSGETEDTFIADLVVG 389
>pdb|4HGV|A Chain A, Crystal Structure Of A Fumarate Hydratase
pdb|4HGV|B Chain B, Crystal Structure Of A Fumarate Hydratase
pdb|4HGV|C Chain C, Crystal Structure Of A Fumarate Hydratase
pdb|4HGV|D Chain D, Crystal Structure Of A Fumarate Hydratase
Length = 495
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 12/35 (34%), Positives = 21/35 (60%)
Query: 121 PMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVG 155
P+ +G E SG ++V + +K ++ T PG C + G
Sbjct: 226 PLTLGQEFSGYAAQVASSIKRIEXTLPGLCELAQG 260
>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
pdb|4A27|B Chain B, Crystal Structure Of Human Synaptic Vesicle Membrane
Protein Vat-1 Homolog-Like Protein
Length = 349
Score = 28.5 bits (62), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 4/64 (6%)
Query: 77 FREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVG 136
FR+ P +P D E+ + + G+ D+ + G I D P++ G E SGIV +G
Sbjct: 21 FRKAMP--EPQDGELKIRVKACGLNFIDLM-VRQGNI-DNPPKTPLVPGFECSGIVEALG 76
Query: 137 AKVK 140
VK
Sbjct: 77 DSVK 80
>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
pdb|1YB5|B Chain B, Crystal Structure Of Human Zeta-crystallin With Bound Nadp
Length = 351
Score = 28.5 bits (62), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/69 (26%), Positives = 31/69 (44%), Gaps = 2/69 (2%)
Query: 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSK 134
L+ R + P DH+VL+++H G+ + Y+ G L P G + +G++
Sbjct: 44 LKLRSDIAVPIPKDHQVLIKVHACGVNPVET-YIRSGTYSRKPLL-PYTPGSDVAGVIEA 101
Query: 135 VGAKVKHLK 143
VG K
Sbjct: 102 VGDNASAFK 110
>pdb|1SEG|A Chain A, Crystal Structure Of A Toxin Chimera Between Lqh-Alpha-It
From The Scorpion Leiurus Quinquestriatus Hebraeus And
Aah2 From Androctonus Australis Hector
Length = 64
Score = 28.1 bits (61), Expect = 8.7, Method: Composition-based stats.
Identities = 16/50 (32%), Positives = 22/50 (44%), Gaps = 8/50 (16%)
Query: 244 CRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSL 293
C YC E L + +C +GN A +C+KLPDHV +
Sbjct: 16 CFRNAYCNEECTKLKGESGYCQWASPYGN--------ACYCYKLPDHVPI 57
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.140 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,333,577
Number of Sequences: 62578
Number of extensions: 524699
Number of successful extensions: 1741
Number of sequences better than 100.0: 129
Number of HSP's better than 100.0 without gapping: 78
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 1351
Number of HSP's gapped (non-prelim): 331
length of query: 408
length of database: 14,973,337
effective HSP length: 101
effective length of query: 307
effective length of database: 8,652,959
effective search space: 2656458413
effective search space used: 2656458413
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 53 (25.0 bits)