Query psy1413
Match_columns 408
No_of_seqs 234 out of 2992
Neff 9.4
Searched_HMMs 46136
Date Fri Aug 16 20:17:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1413.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1413hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0024|consensus 100.0 2.7E-38 5.8E-43 281.9 19.0 255 64-407 5-260 (354)
2 KOG0024|consensus 100.0 5.6E-39 1.2E-43 286.2 13.7 233 1-234 36-353 (354)
3 KOG0023|consensus 100.0 2.8E-35 6E-40 261.9 17.1 157 243-406 101-265 (360)
4 COG1064 AdhP Zn-dependent alco 100.0 5.2E-34 1.1E-38 262.6 16.2 221 1-227 35-332 (339)
5 COG1064 AdhP Zn-dependent alco 100.0 1.4E-33 3E-38 259.7 15.6 229 75-407 16-246 (339)
6 COG1062 AdhC Zn-dependent alco 100.0 6.7E-31 1.4E-35 236.8 18.8 133 271-407 138-272 (366)
7 KOG0022|consensus 100.0 3.4E-29 7.3E-34 222.1 18.1 134 271-407 145-280 (375)
8 COG1063 Tdh Threonine dehydrog 100.0 1.5E-29 3.3E-34 241.6 15.8 229 1-233 32-350 (350)
9 PRK09880 L-idonate 5-dehydroge 100.0 1.1E-29 2.4E-34 243.4 12.9 229 1-233 34-343 (343)
10 PRK09880 L-idonate 5-dehydroge 100.0 1E-27 2.2E-32 229.8 18.2 243 65-406 6-252 (343)
11 COG1063 Tdh Threonine dehydrog 100.0 1.6E-27 3.4E-32 227.8 18.9 233 79-407 16-256 (350)
12 TIGR01202 bchC 2-desacetyl-2-h 100.0 1.4E-28 3E-33 232.1 10.9 225 1-231 32-307 (308)
13 cd08281 liver_ADH_like1 Zinc-d 99.9 2.2E-27 4.8E-32 229.9 13.1 220 1-224 40-365 (371)
14 cd08239 THR_DH_like L-threonin 99.9 2.9E-26 6.3E-31 219.5 18.1 241 69-406 6-248 (339)
15 PLN02586 probable cinnamyl alc 99.9 6.8E-27 1.5E-31 225.3 13.4 226 1-233 44-353 (360)
16 cd08237 ribitol-5-phosphate_DH 99.9 2.4E-27 5.2E-32 226.9 10.1 228 1-234 32-340 (341)
17 cd08239 THR_DH_like L-threonin 99.9 7.5E-27 1.6E-31 223.6 13.5 228 1-233 31-339 (339)
18 cd08281 liver_ADH_like1 Zinc-d 99.9 6.9E-26 1.5E-30 219.4 18.9 238 72-407 18-277 (371)
19 TIGR03451 mycoS_dep_FDH mycoth 99.9 1.7E-26 3.7E-31 222.6 14.4 226 1-232 33-357 (358)
20 TIGR02819 fdhA_non_GSH formald 99.9 8.1E-27 1.8E-31 226.6 11.8 227 1-233 40-390 (393)
21 PLN02178 cinnamyl-alcohol dehy 99.9 1.8E-26 4E-31 223.0 13.3 229 1-236 38-351 (375)
22 PLN02740 Alcohol dehydrogenase 99.9 1.2E-25 2.6E-30 218.4 17.0 245 69-407 16-286 (381)
23 PLN02740 Alcohol dehydrogenase 99.9 4E-26 8.7E-31 221.7 13.6 228 1-232 42-380 (381)
24 PLN02827 Alcohol dehydrogenase 99.9 5.5E-26 1.2E-30 220.3 12.5 225 1-233 44-376 (378)
25 TIGR02822 adh_fam_2 zinc-bindi 99.9 9.6E-26 2.1E-30 214.7 13.2 223 1-231 34-328 (329)
26 TIGR02818 adh_III_F_hyde S-(hy 99.9 3.9E-25 8.4E-30 213.8 17.6 238 74-406 13-272 (368)
27 TIGR03451 mycoS_dep_FDH mycoth 99.9 2.9E-25 6.4E-30 214.0 16.4 236 75-407 14-263 (358)
28 TIGR03366 HpnZ_proposed putati 99.9 2.8E-25 6E-30 206.9 15.5 169 233-407 29-205 (280)
29 TIGR02819 fdhA_non_GSH formald 99.9 3.7E-25 7.9E-30 215.0 16.8 236 68-400 7-265 (393)
30 KOG1202|consensus 99.9 5.6E-25 1.2E-29 221.0 16.7 324 1-396 1451-1855(2376)
31 TIGR02818 adh_III_F_hyde S-(hy 99.9 1.4E-25 3E-30 216.9 12.0 226 1-232 33-367 (368)
32 cd08230 glucose_DH Glucose deh 99.9 2.6E-25 5.5E-30 214.3 13.5 228 1-233 32-355 (355)
33 cd08300 alcohol_DH_class_III c 99.9 2.1E-24 4.6E-29 208.8 18.7 239 73-406 13-273 (368)
34 PLN02827 Alcohol dehydrogenase 99.9 2.3E-24 5E-29 209.0 18.4 243 67-407 16-281 (378)
35 COG0604 Qor NADPH:quinone redu 99.9 1.6E-24 3.5E-29 204.4 16.3 211 71-403 11-225 (326)
36 PLN02514 cinnamyl-alcohol dehy 99.9 4E-25 8.6E-30 212.9 12.5 227 1-234 41-351 (357)
37 COG0604 Qor NADPH:quinone redu 99.9 2.1E-25 4.5E-30 210.4 10.1 228 1-232 34-325 (326)
38 PRK10309 galactitol-1-phosphat 99.9 3.8E-25 8.2E-30 212.5 12.1 226 1-233 32-346 (347)
39 TIGR03201 dearomat_had 6-hydro 99.9 3.5E-24 7.5E-29 205.9 18.6 243 69-406 4-258 (349)
40 TIGR03201 dearomat_had 6-hydro 99.9 7.6E-25 1.6E-29 210.4 13.1 226 1-232 30-348 (349)
41 cd08301 alcohol_DH_plants Plan 99.9 7.4E-25 1.6E-29 212.2 13.1 225 1-231 34-368 (369)
42 cd08277 liver_alcohol_DH_like 99.9 9.3E-25 2E-29 211.1 12.9 224 1-231 34-364 (365)
43 PRK10309 galactitol-1-phosphat 99.9 5.4E-24 1.2E-28 204.5 17.5 238 70-407 7-247 (347)
44 cd08301 alcohol_DH_plants Plan 99.9 1.1E-23 2.4E-28 203.9 19.0 238 74-406 14-274 (369)
45 cd08233 butanediol_DH_like (2R 99.9 1.1E-23 2.5E-28 202.5 18.6 245 68-405 5-257 (351)
46 cd08300 alcohol_DH_class_III c 99.9 2.3E-24 5E-29 208.5 13.6 226 1-232 34-368 (368)
47 cd08277 liver_alcohol_DH_like 99.9 1.1E-23 2.4E-28 203.6 17.2 237 74-406 14-271 (365)
48 cd08238 sorbose_phosphate_red 99.9 4.9E-24 1.1E-28 209.0 13.5 234 1-237 33-372 (410)
49 cd08233 butanediol_DH_like (2R 99.9 8.7E-24 1.9E-28 203.4 13.2 229 1-231 31-350 (351)
50 cd08299 alcohol_DH_class_I_II_ 99.9 1.1E-22 2.3E-27 197.1 17.8 237 73-405 18-276 (373)
51 cd08230 glucose_DH Glucose deh 99.9 9.2E-23 2E-27 196.5 16.7 230 75-406 13-255 (355)
52 cd05285 sorbitol_DH Sorbitol d 99.9 2E-22 4.3E-27 193.3 18.0 245 68-402 3-247 (343)
53 PLN02586 probable cinnamyl alc 99.9 1.6E-22 3.5E-27 194.9 16.9 227 79-406 28-264 (360)
54 KOG1197|consensus 99.9 7.4E-24 1.6E-28 182.6 5.7 225 2-232 43-329 (336)
55 PLN02178 cinnamyl-alcohol dehy 99.9 1.9E-22 4.2E-27 195.0 16.2 231 74-406 18-259 (375)
56 cd08231 MDR_TM0436_like Hypoth 99.9 3.9E-22 8.5E-27 192.6 18.2 239 74-405 12-265 (361)
57 PRK10083 putative oxidoreducta 99.9 1.2E-22 2.5E-27 194.6 13.0 229 1-234 31-338 (339)
58 cd08231 MDR_TM0436_like Hypoth 99.9 1.5E-22 3.3E-27 195.4 13.0 227 1-232 32-360 (361)
59 cd08285 NADP_ADH NADP(H)-depen 99.9 8.8E-22 1.9E-26 189.4 17.9 242 69-406 6-252 (351)
60 TIGR02822 adh_fam_2 zinc-bindi 99.9 4.6E-22 1E-26 189.4 15.5 226 74-407 14-241 (329)
61 PRK10083 putative oxidoreducta 99.9 1.1E-21 2.3E-26 188.0 17.6 239 69-406 6-245 (339)
62 cd08256 Zn_ADH2 Alcohol dehydr 99.9 2.4E-21 5.1E-26 186.4 19.0 242 69-404 6-258 (350)
63 PLN02702 L-idonate 5-dehydroge 99.9 1.7E-21 3.6E-26 188.4 17.7 244 71-405 25-270 (364)
64 cd08291 ETR_like_1 2-enoyl thi 99.9 2.2E-22 4.7E-27 191.5 11.2 224 1-231 37-323 (324)
65 cd08237 ribitol-5-phosphate_DH 99.9 2.8E-21 6E-26 185.0 17.5 231 65-407 4-243 (341)
66 cd08283 FDH_like_1 Glutathione 99.9 1.5E-21 3.4E-26 189.9 14.8 228 1-232 32-385 (386)
67 cd08285 NADP_ADH NADP(H)-depen 99.9 2.1E-21 4.6E-26 186.8 14.2 228 1-232 31-350 (351)
68 cd05279 Zn_ADH1 Liver alcohol 99.9 8.9E-21 1.9E-25 183.3 18.4 237 74-406 12-270 (365)
69 KOG1197|consensus 99.9 2.3E-21 4.9E-26 167.3 11.5 208 69-402 17-228 (336)
70 PRK05396 tdh L-threonine 3-deh 99.9 1.2E-20 2.6E-25 180.9 17.9 237 74-405 12-248 (341)
71 cd08292 ETR_like_2 2-enoyl thi 99.9 1.4E-20 2.9E-25 179.0 17.9 126 271-401 93-220 (324)
72 cd05284 arabinose_DH_like D-ar 99.9 1.5E-20 3.3E-25 180.0 17.2 230 80-404 17-250 (340)
73 cd08246 crotonyl_coA_red croto 99.9 2.2E-20 4.7E-25 182.5 18.5 236 75-400 30-296 (393)
74 cd08278 benzyl_alcohol_DH Benz 99.9 1.8E-20 4E-25 181.1 17.4 232 75-405 15-270 (365)
75 TIGR03366 HpnZ_proposed putati 99.9 5.6E-22 1.2E-26 184.6 6.5 184 29-212 1-280 (280)
76 cd08293 PTGR2 Prostaglandin re 99.9 1.9E-20 4.1E-25 179.7 17.2 123 274-401 104-236 (345)
77 cd08286 FDH_like_ADH2 formalde 99.8 1.1E-20 2.3E-25 181.5 14.8 229 1-232 32-344 (345)
78 PLN02702 L-idonate 5-dehydroge 99.8 5.7E-21 1.2E-25 184.7 12.3 229 1-232 48-363 (364)
79 cd08265 Zn_ADH3 Alcohol dehydr 99.8 2.8E-20 6.1E-25 181.0 16.8 236 74-400 38-286 (384)
80 cd08283 FDH_like_1 Glutathione 99.8 6.2E-20 1.3E-24 178.7 19.1 236 69-400 6-265 (386)
81 cd08296 CAD_like Cinnamyl alco 99.8 8.3E-21 1.8E-25 181.3 12.7 223 1-231 32-332 (333)
82 cd08287 FDH_like_ADH3 formalde 99.8 6.5E-20 1.4E-24 176.0 18.9 241 68-406 5-254 (345)
83 cd08284 FDH_like_2 Glutathione 99.8 5.3E-20 1.2E-24 176.5 18.2 237 71-405 8-251 (344)
84 cd08296 CAD_like Cinnamyl alco 99.8 2.5E-20 5.5E-25 178.0 15.8 231 74-405 12-244 (333)
85 cd08232 idonate-5-DH L-idonate 99.8 1.4E-20 3.1E-25 180.1 13.6 230 1-232 28-338 (339)
86 PLN02514 cinnamyl-alcohol dehy 99.8 3.2E-20 6.9E-25 178.8 16.0 235 69-406 15-261 (357)
87 cd08282 PFDH_like Pseudomonas 99.8 1.8E-20 4E-25 181.8 14.1 225 1-232 32-374 (375)
88 cd08238 sorbose_phosphate_red 99.8 6.4E-20 1.4E-24 179.9 17.8 236 68-407 7-275 (410)
89 cd05285 sorbitol_DH Sorbitol d 99.8 1.3E-20 2.7E-25 180.8 12.2 231 1-232 29-342 (343)
90 cd08278 benzyl_alcohol_DH Benz 99.8 2.2E-20 4.7E-25 180.6 13.7 224 1-231 34-364 (365)
91 KOG0025|consensus 99.8 8.5E-21 1.8E-25 166.8 9.7 223 2-228 55-347 (354)
92 cd08232 idonate-5-DH L-idonate 99.8 8.4E-20 1.8E-24 174.8 17.6 239 68-403 2-245 (339)
93 cd05278 FDH_like Formaldehyde 99.8 1.3E-19 2.8E-24 174.1 18.4 238 69-402 6-249 (347)
94 cd05279 Zn_ADH1 Liver alcohol 99.8 2.1E-20 4.6E-25 180.7 12.9 224 1-231 32-364 (365)
95 TIGR01751 crot-CoA-red crotony 99.8 1.1E-19 2.3E-24 177.8 17.7 167 233-400 102-291 (398)
96 cd08282 PFDH_like Pseudomonas 99.8 1.5E-19 3.2E-24 175.4 17.8 234 69-401 6-255 (375)
97 cd08274 MDR9 Medium chain dehy 99.8 1.7E-20 3.8E-25 180.3 10.9 227 1-232 35-349 (350)
98 cd08261 Zn_ADH7 Alcohol dehydr 99.8 2.1E-19 4.4E-24 172.0 18.1 233 72-403 9-241 (337)
99 cd08286 FDH_like_ADH2 formalde 99.8 2.5E-19 5.5E-24 171.9 18.5 240 69-404 6-250 (345)
100 cd08284 FDH_like_2 Glutathione 99.8 7.6E-20 1.7E-24 175.4 14.7 226 1-232 32-343 (344)
101 cd05283 CAD1 Cinnamyl alcohol 99.8 2.3E-20 5E-25 178.6 11.0 224 1-231 31-336 (337)
102 PRK05396 tdh L-threonine 3-deh 99.8 3.6E-20 7.8E-25 177.5 12.3 229 1-234 32-341 (341)
103 cd08299 alcohol_DH_class_I_II_ 99.8 8E-20 1.7E-24 177.0 14.4 225 1-232 39-372 (373)
104 cd08242 MDR_like Medium chain 99.8 2.1E-19 4.5E-24 170.6 16.9 223 70-404 7-229 (319)
105 cd08235 iditol_2_DH_like L-idi 99.8 2.6E-19 5.7E-24 171.6 17.7 235 72-403 9-248 (343)
106 cd08279 Zn_ADH_class_III Class 99.8 2.7E-19 5.9E-24 172.9 17.6 233 75-404 13-266 (363)
107 PLN03154 putative allyl alcoho 99.8 2.9E-20 6.3E-25 178.4 10.1 227 1-233 50-345 (348)
108 TIGR00692 tdh L-threonine 3-de 99.8 3.8E-19 8.3E-24 170.3 17.5 235 75-404 11-245 (340)
109 cd08287 FDH_like_ADH3 formalde 99.8 1.1E-19 2.3E-24 174.5 13.1 225 1-232 32-344 (345)
110 cd08244 MDR_enoyl_red Possible 99.8 7.7E-19 1.7E-23 166.9 18.5 127 271-402 96-224 (324)
111 cd05284 arabinose_DH_like D-ar 99.8 1.2E-19 2.6E-24 173.8 12.6 225 1-231 32-338 (340)
112 cd08263 Zn_ADH10 Alcohol dehyd 99.8 1.2E-19 2.7E-24 175.5 12.6 226 1-231 32-366 (367)
113 cd08262 Zn_ADH8 Alcohol dehydr 99.8 1.1E-19 2.4E-24 174.1 12.1 228 1-231 30-340 (341)
114 cd05188 MDR Medium chain reduc 99.8 1.1E-18 2.4E-23 161.1 18.0 125 270-400 86-212 (271)
115 cd08242 MDR_like Medium chain 99.8 8.5E-20 1.8E-24 173.2 10.7 217 1-232 31-318 (319)
116 cd08240 6_hydroxyhexanoate_dh_ 99.8 2.2E-19 4.8E-24 172.6 13.2 227 1-231 32-348 (350)
117 cd08256 Zn_ADH2 Alcohol dehydr 99.8 1.4E-19 3E-24 174.1 11.7 226 1-230 31-349 (350)
118 cd08263 Zn_ADH10 Alcohol dehyd 99.8 8.1E-19 1.8E-23 169.9 17.0 231 75-402 13-269 (367)
119 cd08236 sugar_DH NAD(P)-depend 99.8 1E-18 2.2E-23 167.6 17.5 232 73-403 10-241 (343)
120 TIGR00692 tdh L-threonine 3-de 99.8 2.3E-19 5.1E-24 171.8 13.0 229 1-233 30-340 (340)
121 TIGR02817 adh_fam_1 zinc-bindi 99.8 8.7E-19 1.9E-23 167.5 16.8 127 270-403 95-230 (336)
122 cd08290 ETR 2-enoyl thioester 99.8 6.6E-19 1.4E-23 168.7 15.9 129 271-402 99-234 (341)
123 cd05278 FDH_like Formaldehyde 99.8 4.8E-19 1E-23 170.1 14.9 228 1-232 32-346 (347)
124 cd08246 crotonyl_coA_red croto 99.8 1.8E-19 4E-24 176.0 11.9 228 1-230 49-390 (393)
125 PRK09422 ethanol-active dehydr 99.8 3.4E-19 7.3E-24 170.5 13.3 224 1-233 32-336 (338)
126 cd05281 TDH Threonine dehydrog 99.8 1.1E-18 2.4E-23 167.2 16.9 233 75-403 13-245 (341)
127 cd08262 Zn_ADH8 Alcohol dehydr 99.8 2.2E-18 4.8E-23 165.1 18.6 228 74-402 10-246 (341)
128 cd08240 6_hydroxyhexanoate_dh_ 99.8 1.1E-18 2.4E-23 167.8 15.9 166 233-404 91-258 (350)
129 cd08297 CAD3 Cinnamyl alcohol 99.8 1.8E-18 4E-23 165.6 17.1 235 74-405 13-250 (341)
130 cd08265 Zn_ADH3 Alcohol dehydr 99.8 4.6E-19 1E-23 172.5 12.2 227 1-230 58-382 (384)
131 cd08260 Zn_ADH6 Alcohol dehydr 99.8 2.8E-18 6.1E-23 164.6 17.4 232 75-404 13-248 (345)
132 cd08279 Zn_ADH_class_III Class 99.8 7.1E-19 1.5E-23 170.0 13.3 220 1-224 32-357 (363)
133 cd05282 ETR_like 2-enoyl thioe 99.8 2.9E-18 6.2E-23 162.9 17.2 126 272-402 92-220 (323)
134 cd08261 Zn_ADH7 Alcohol dehydr 99.8 8.6E-19 1.9E-23 167.7 13.4 226 1-232 31-336 (337)
135 TIGR01202 bchC 2-desacetyl-2-h 99.8 1.1E-18 2.5E-23 164.6 13.4 212 67-407 5-218 (308)
136 cd08269 Zn_ADH9 Alcohol dehydr 99.8 1.1E-18 2.4E-23 164.9 13.0 228 1-231 26-311 (312)
137 cd08264 Zn_ADH_like2 Alcohol d 99.8 2E-18 4.3E-23 164.3 14.8 220 74-400 13-234 (325)
138 KOG1198|consensus 99.8 3E-18 6.5E-23 162.0 15.5 127 268-400 101-236 (347)
139 cd05283 CAD1 Cinnamyl alcohol 99.8 3.1E-18 6.7E-23 163.8 15.8 229 74-404 11-247 (337)
140 cd08249 enoyl_reductase_like e 99.8 6.4E-18 1.4E-22 161.8 16.4 128 270-404 96-236 (339)
141 cd08235 iditol_2_DH_like L-idi 99.8 1.7E-18 3.7E-23 166.0 12.1 225 1-231 31-342 (343)
142 cd08295 double_bond_reductase_ 99.8 1.2E-18 2.7E-23 166.7 11.0 227 1-232 44-337 (338)
143 PRK13771 putative alcohol dehy 99.8 3.3E-18 7.2E-23 163.4 13.8 226 1-232 32-332 (334)
144 cd08234 threonine_DH_like L-th 99.8 1E-17 2.2E-22 160.1 16.9 232 72-403 9-240 (334)
145 PRK10754 quinone oxidoreductas 99.8 1.1E-17 2.3E-22 159.4 17.0 124 272-400 94-220 (327)
146 cd08254 hydroxyacyl_CoA_DH 6-h 99.8 3.1E-18 6.6E-23 163.7 13.2 226 1-232 33-337 (338)
147 cd08260 Zn_ADH6 Alcohol dehydr 99.8 3.4E-18 7.4E-23 164.1 13.3 227 1-231 32-343 (345)
148 PRK09422 ethanol-active dehydr 99.8 9.6E-18 2.1E-22 160.5 16.1 229 79-406 16-247 (338)
149 cd05281 TDH Threonine dehydrog 99.8 2.5E-18 5.4E-23 164.8 12.0 228 1-232 32-340 (341)
150 cd08254 hydroxyacyl_CoA_DH 6-h 99.8 1.3E-17 2.7E-22 159.5 16.4 230 79-405 17-248 (338)
151 cd08251 polyketide_synthase po 99.8 2.5E-17 5.3E-22 154.7 17.8 125 271-400 74-200 (303)
152 cd08270 MDR4 Medium chain dehy 99.8 1.9E-18 4.1E-23 162.8 9.6 222 1-232 33-304 (305)
153 smart00829 PKS_ER Enoylreducta 99.8 1.9E-17 4.1E-22 154.0 16.2 124 272-400 58-186 (288)
154 PTZ00354 alcohol dehydrogenase 99.8 3.6E-17 7.8E-22 156.0 18.0 126 271-401 93-222 (334)
155 cd08266 Zn_ADH_like1 Alcohol d 99.8 3.1E-17 6.7E-22 156.7 17.5 231 73-400 13-246 (342)
156 cd08250 Mgc45594_like Mgc45594 99.8 4.4E-17 9.5E-22 155.3 18.4 123 271-400 94-218 (329)
157 cd08297 CAD3 Cinnamyl alcohol 99.8 9.9E-18 2.2E-22 160.6 13.5 225 1-232 33-340 (341)
158 cd08236 sugar_DH NAD(P)-depend 99.8 6.8E-18 1.5E-22 161.8 12.3 225 1-230 31-342 (343)
159 TIGR02825 B4_12hDH leukotriene 99.7 1.8E-18 3.9E-23 164.6 8.2 219 1-231 38-324 (325)
160 cd05195 enoyl_red enoyl reduct 99.7 3.3E-17 7.2E-22 152.5 16.5 124 272-400 62-190 (293)
161 cd05286 QOR2 Quinone oxidoredu 99.7 4E-17 8.7E-22 154.2 17.3 124 272-400 90-216 (320)
162 cd08289 MDR_yhfp_like Yhfp put 99.7 3.6E-17 7.8E-22 155.6 17.0 124 270-400 95-224 (326)
163 PRK13771 putative alcohol dehy 99.7 2.4E-17 5.2E-22 157.4 15.6 223 75-401 13-237 (334)
164 cd08234 threonine_DH_like L-th 99.7 6.1E-18 1.3E-22 161.5 11.1 223 1-231 31-333 (334)
165 TIGR01751 crot-CoA-red crotony 99.7 7.4E-18 1.6E-22 164.8 11.8 230 1-233 44-387 (398)
166 cd08291 ETR_like_1 2-enoyl thi 99.7 3E-17 6.4E-22 156.2 15.3 206 73-402 16-225 (324)
167 cd08264 Zn_ADH_like2 Alcohol d 99.7 6.6E-18 1.4E-22 160.7 10.6 214 1-223 33-319 (325)
168 cd08259 Zn_ADH5 Alcohol dehydr 99.7 8.3E-17 1.8E-21 153.4 18.1 226 73-401 11-238 (332)
169 cd08298 CAD2 Cinnamyl alcohol 99.7 1.2E-17 2.7E-22 159.1 12.4 216 1-224 36-323 (329)
170 cd08253 zeta_crystallin Zeta-c 99.7 8.3E-17 1.8E-21 152.4 17.7 127 270-401 96-225 (325)
171 cd08258 Zn_ADH4 Alcohol dehydr 99.7 5.5E-17 1.2E-21 153.1 15.9 232 74-404 13-248 (306)
172 cd08255 2-desacetyl-2-hydroxye 99.7 8E-18 1.7E-22 156.4 10.0 208 20-231 14-277 (277)
173 cd08248 RTN4I1 Human Reticulon 99.7 9.4E-17 2E-21 154.3 16.5 121 271-400 111-238 (350)
174 cd08243 quinone_oxidoreductase 99.7 1E-16 2.2E-21 151.9 16.3 124 270-401 94-220 (320)
175 cd08259 Zn_ADH5 Alcohol dehydr 99.7 3E-17 6.4E-22 156.4 12.0 225 1-231 32-331 (332)
176 cd08247 AST1_like AST1 is a cy 99.7 1.6E-16 3.6E-21 152.9 17.1 132 270-402 98-238 (352)
177 cd08298 CAD2 Cinnamyl alcohol 99.7 7.1E-17 1.5E-21 153.9 14.4 157 233-405 83-241 (329)
178 cd08252 AL_MDR Arginate lyase 99.7 1.8E-16 4E-21 151.4 16.8 128 270-404 96-232 (336)
179 cd05276 p53_inducible_oxidored 99.7 2.5E-16 5.4E-21 149.0 17.5 126 271-401 92-220 (323)
180 cd08245 CAD Cinnamyl alcohol d 99.7 1.3E-16 2.7E-21 152.2 15.2 228 74-404 11-240 (330)
181 TIGR02823 oxido_YhdH putative 99.7 2.4E-16 5.2E-21 149.8 17.1 124 270-401 94-223 (323)
182 TIGR02825 B4_12hDH leukotriene 99.7 2.7E-16 5.9E-21 149.6 16.0 126 271-401 86-219 (325)
183 cd08294 leukotriene_B4_DH_like 99.7 4.1E-16 9E-21 148.5 17.0 125 271-401 88-223 (329)
184 cd08274 MDR9 Medium chain dehy 99.7 3.4E-16 7.3E-21 150.5 16.3 152 233-401 102-255 (350)
185 cd08245 CAD Cinnamyl alcohol d 99.7 6.7E-17 1.4E-21 154.1 10.8 217 1-224 31-324 (330)
186 cd05280 MDR_yhdh_yhfp Yhdh and 99.7 4.5E-17 9.7E-22 154.8 9.5 224 1-232 34-324 (325)
187 cd08294 leukotriene_B4_DH_like 99.7 4.7E-17 1E-21 155.0 9.6 220 1-232 40-328 (329)
188 cd08295 double_bond_reductase_ 99.7 2.5E-16 5.5E-21 150.7 14.7 125 271-400 101-232 (338)
189 cd08266 Zn_ADH_like1 Alcohol d 99.7 8E-17 1.7E-21 153.8 10.6 227 1-232 34-341 (342)
190 cd08272 MDR6 Medium chain dehy 99.7 1E-15 2.2E-20 145.2 18.1 125 270-401 96-223 (326)
191 cd08268 MDR2 Medium chain dehy 99.7 9.5E-16 2.1E-20 145.4 17.9 126 271-401 97-225 (328)
192 cd08276 MDR7 Medium chain dehy 99.7 9.9E-17 2.1E-21 153.1 11.0 226 1-231 34-334 (336)
193 cd08269 Zn_ADH9 Alcohol dehydr 99.7 6.5E-16 1.4E-20 146.0 16.2 129 270-404 84-213 (312)
194 cd08267 MDR1 Medium chain dehy 99.7 7.5E-16 1.6E-20 145.8 15.4 120 271-399 96-218 (319)
195 TIGR02824 quinone_pig3 putativ 99.7 3.4E-15 7.3E-20 141.5 17.8 123 273-400 94-219 (325)
196 cd08271 MDR5 Medium chain dehy 99.7 3.7E-15 8.1E-20 141.4 18.1 126 271-402 94-222 (325)
197 cd08258 Zn_ADH4 Alcohol dehydr 99.6 2.8E-16 6E-21 148.3 8.2 191 1-195 33-306 (306)
198 cd08241 QOR1 Quinone oxidoredu 99.6 5E-15 1.1E-19 140.1 16.7 123 273-400 94-219 (323)
199 PLN03154 putative allyl alcoho 99.6 2.9E-15 6.2E-20 143.8 14.8 125 271-400 106-239 (348)
200 cd08273 MDR8 Medium chain dehy 99.6 3.9E-16 8.5E-21 148.7 8.6 225 1-230 34-329 (331)
201 cd05289 MDR_like_2 alcohol deh 99.6 3.5E-15 7.6E-20 140.3 14.9 120 271-400 97-219 (309)
202 cd08288 MDR_yhdh Yhdh putative 99.6 7.7E-15 1.7E-19 139.5 17.3 123 270-400 95-223 (324)
203 KOG0025|consensus 99.6 4.2E-15 9.2E-20 131.2 13.9 208 75-405 35-249 (354)
204 COG2130 Putative NADP-dependen 99.6 2.3E-14 5E-19 127.8 15.9 126 270-401 100-231 (340)
205 cd08275 MDR3 Medium chain dehy 99.6 8.1E-14 1.8E-18 132.9 17.6 123 272-401 92-218 (337)
206 cd05288 PGDH Prostaglandin deh 99.6 8.1E-15 1.8E-19 139.6 9.4 219 1-224 39-323 (329)
207 cd08276 MDR7 Medium chain dehy 99.6 9.4E-14 2E-18 132.5 16.5 157 233-400 82-240 (336)
208 KOG1198|consensus 99.5 8.8E-15 1.9E-19 138.5 7.4 228 2-233 40-345 (347)
209 KOG0023|consensus 99.5 2.6E-14 5.7E-19 128.4 10.0 219 1-226 43-348 (360)
210 COG1062 AdhC Zn-dependent alco 99.5 2.5E-14 5.3E-19 130.0 8.1 219 1-224 34-359 (366)
211 cd05288 PGDH Prostaglandin deh 99.5 2.7E-13 5.8E-18 129.1 15.8 124 271-400 94-225 (329)
212 cd05280 MDR_yhdh_yhfp Yhdh and 99.5 3.4E-13 7.3E-18 128.1 14.9 124 270-400 95-224 (325)
213 cd08270 MDR4 Medium chain dehy 99.5 4.8E-13 1E-17 126.0 13.6 118 270-401 85-204 (305)
214 cd08255 2-desacetyl-2-hydroxye 99.5 4.1E-13 8.9E-18 124.7 11.5 121 272-404 53-174 (277)
215 cd08273 MDR8 Medium chain dehy 99.4 4.1E-12 8.8E-17 121.1 13.3 122 270-401 91-215 (331)
216 PF08240 ADH_N: Alcohol dehydr 99.4 4E-13 8.7E-18 106.4 3.7 69 1-71 8-76 (109)
217 KOG0022|consensus 99.3 5E-12 1.1E-16 113.3 8.6 218 1-223 39-367 (375)
218 KOG1202|consensus 99.2 2.4E-11 5.2E-16 124.2 8.0 134 262-401 1497-1637(2376)
219 PF00107 ADH_zinc_N: Zinc-bind 99.2 5.1E-11 1.1E-15 97.5 8.0 76 327-407 1-76 (130)
220 KOG1196|consensus 99.1 4E-10 8.8E-15 100.6 11.3 140 253-401 87-235 (343)
221 COG2130 Putative NADP-dependen 99.0 2.3E-09 5.1E-14 96.1 11.5 205 25-232 66-337 (340)
222 cd00401 AdoHcyase S-adenosyl-L 98.9 2.8E-09 6.1E-14 102.7 8.6 135 100-236 200-379 (413)
223 cd08292 ETR_like_2 2-enoyl thi 98.9 2.3E-09 5E-14 101.7 5.5 225 1-231 35-323 (324)
224 PF08240 ADH_N: Alcohol dehydr 98.8 1.7E-09 3.7E-14 85.5 2.1 108 89-287 2-109 (109)
225 KOG1196|consensus 98.7 2.9E-08 6.4E-13 88.9 8.0 185 33-225 78-333 (343)
226 cd08293 PTGR2 Prostaglandin re 98.6 5.5E-08 1.2E-12 93.3 7.5 228 1-232 43-344 (345)
227 cd08244 MDR_enoyl_red Possible 98.6 4.4E-08 9.5E-13 92.9 6.5 227 1-232 34-323 (324)
228 cd05282 ETR_like 2-enoyl thioe 98.6 7.3E-08 1.6E-12 91.3 5.2 226 1-231 33-322 (323)
229 TIGR02823 oxido_YhdH putative 98.5 1.3E-07 2.9E-12 89.7 6.8 224 1-232 33-322 (323)
230 PRK10754 quinone oxidoreductas 98.5 5.6E-08 1.2E-12 92.4 2.5 228 1-232 35-326 (327)
231 PRK09424 pntA NAD(P) transhydr 98.5 7.2E-07 1.6E-11 88.4 10.3 87 314-401 162-260 (509)
232 cd08290 ETR 2-enoyl thioester 98.5 1.3E-07 2.9E-12 90.4 5.1 228 1-232 36-340 (341)
233 PTZ00354 alcohol dehydrogenase 98.5 1.3E-07 2.8E-12 90.0 4.5 229 1-234 35-329 (334)
234 cd08289 MDR_yhfp_like Yhfp put 98.5 1.6E-07 3.4E-12 89.3 4.8 226 1-232 34-325 (326)
235 PF00107 ADH_zinc_N: Zinc-bind 98.4 2.8E-07 6E-12 75.2 4.2 68 127-194 58-130 (130)
236 cd08243 quinone_oxidoreductase 98.4 3E-07 6.5E-12 86.8 5.0 222 1-230 34-318 (320)
237 TIGR02817 adh_fam_1 zinc-bindi 98.4 2.5E-07 5.5E-12 88.3 4.3 223 1-232 36-334 (336)
238 cd08249 enoyl_reductase_like e 98.4 6.4E-07 1.4E-11 85.8 6.4 227 1-232 33-338 (339)
239 cd08250 Mgc45594_like Mgc45594 98.3 4.6E-07 1E-11 86.2 4.7 225 1-231 37-328 (329)
240 PF13602 ADH_zinc_N_2: Zinc-bi 98.3 9.7E-07 2.1E-11 71.6 5.5 98 125-231 17-127 (127)
241 cd08252 AL_MDR Arginate lyase 98.3 6.5E-07 1.4E-11 85.4 4.0 225 1-231 37-335 (336)
242 cd05286 QOR2 Quinone oxidoredu 98.2 1.4E-06 3E-11 82.0 5.8 224 1-231 33-318 (320)
243 cd08288 MDR_yhdh Yhdh putative 98.2 2.3E-06 5.1E-11 81.1 6.3 223 1-231 34-322 (324)
244 cd05213 NAD_bind_Glutamyl_tRNA 98.2 2.6E-06 5.7E-11 80.2 6.5 108 282-402 139-251 (311)
245 cd05276 p53_inducible_oxidored 98.2 2.2E-06 4.8E-11 80.7 5.5 220 1-224 34-317 (323)
246 PF08659 KR: KR domain; Inter 98.2 1E-05 2.2E-10 70.1 9.0 83 318-400 1-92 (181)
247 cd08248 RTN4I1 Human Reticulon 98.1 1.5E-06 3.2E-11 83.5 3.4 227 1-231 36-349 (350)
248 cd08241 QOR1 Quinone oxidoredu 98.1 3E-06 6.5E-11 79.9 4.9 225 1-230 34-321 (323)
249 PRK08261 fabG 3-ketoacyl-(acyl 98.1 0.00014 3E-09 72.5 16.2 82 315-400 208-295 (450)
250 COG0300 DltE Short-chain dehyd 98.1 4.1E-05 8.9E-10 69.4 10.9 85 315-400 4-95 (265)
251 TIGR02824 quinone_pig3 putativ 98.0 7E-06 1.5E-10 77.5 5.6 226 1-231 34-323 (325)
252 cd08253 zeta_crystallin Zeta-c 98.0 1.1E-05 2.4E-10 76.1 6.1 226 1-231 34-323 (325)
253 TIGR01035 hemA glutamyl-tRNA r 98.0 3.3E-06 7.2E-11 82.8 2.4 140 235-402 108-253 (417)
254 cd08272 MDR6 Medium chain dehy 98.0 6.5E-06 1.4E-10 77.8 4.3 224 1-232 34-325 (326)
255 cd00401 AdoHcyase S-adenosyl-L 98.0 1.5E-05 3.2E-10 77.2 6.6 76 314-406 199-274 (413)
256 PF00106 adh_short: short chai 98.0 4.2E-05 9.2E-10 64.9 8.8 84 318-401 1-92 (167)
257 COG4221 Short-chain alcohol de 98.0 7.6E-05 1.6E-09 66.0 10.2 85 316-401 5-93 (246)
258 cd05289 MDR_like_2 alcohol deh 97.9 3.1E-06 6.6E-11 79.4 1.6 217 1-224 34-303 (309)
259 PRK06139 short chain dehydroge 97.9 6.4E-05 1.4E-09 71.6 10.2 84 316-400 6-95 (330)
260 cd08275 MDR3 Medium chain dehy 97.9 1.7E-05 3.7E-10 75.4 6.3 227 1-232 33-336 (337)
261 PRK09424 pntA NAD(P) transhydr 97.9 1.9E-05 4.2E-10 78.4 5.9 105 100-204 163-339 (509)
262 smart00829 PKS_ER Enoylreducta 97.8 8.8E-06 1.9E-10 75.2 2.7 214 1-223 4-281 (288)
263 PF01488 Shikimate_DH: Shikima 97.8 7.1E-05 1.5E-09 61.4 7.5 74 316-401 11-87 (135)
264 cd08268 MDR2 Medium chain dehy 97.8 2.3E-05 5.1E-10 74.0 5.2 227 1-232 34-327 (328)
265 PRK08339 short chain dehydroge 97.8 0.00017 3.7E-09 66.4 10.6 84 316-400 7-96 (263)
266 PRK00045 hemA glutamyl-tRNA re 97.8 5.5E-05 1.2E-09 74.5 7.5 89 301-402 162-255 (423)
267 PRK05872 short chain dehydroge 97.8 0.00016 3.4E-09 67.8 10.0 84 316-400 8-96 (296)
268 COG3967 DltE Short-chain dehyd 97.8 0.00014 2.9E-09 62.3 8.3 85 316-404 4-93 (245)
269 cd08267 MDR1 Medium chain dehy 97.8 1.3E-05 2.8E-10 75.6 2.3 220 1-223 33-312 (319)
270 cd08251 polyketide_synthase po 97.7 2E-05 4.4E-10 73.6 3.5 219 1-224 14-297 (303)
271 cd08271 MDR5 Medium chain dehy 97.7 2.2E-05 4.7E-10 74.3 3.1 226 1-232 34-324 (325)
272 PRK05993 short chain dehydroge 97.7 0.00019 4E-09 66.7 9.0 82 316-400 3-87 (277)
273 PRK07814 short chain dehydroge 97.7 0.00032 6.9E-09 64.5 10.4 83 316-399 9-97 (263)
274 cd05188 MDR Medium chain reduc 97.7 1.9E-05 4.2E-10 72.4 2.3 190 1-192 6-271 (271)
275 PRK06500 short chain dehydroge 97.7 0.00031 6.8E-09 63.8 10.2 84 316-400 5-91 (249)
276 PRK09072 short chain dehydroge 97.7 0.00037 8E-09 64.0 10.7 84 316-400 4-91 (263)
277 PRK08217 fabG 3-ketoacyl-(acyl 97.7 0.00035 7.6E-09 63.5 10.5 83 316-399 4-92 (253)
278 PRK07478 short chain dehydroge 97.7 0.00038 8.3E-09 63.5 10.7 84 316-400 5-94 (254)
279 TIGR00561 pntA NAD(P) transhyd 97.7 0.00022 4.9E-09 70.7 9.6 81 315-397 162-255 (511)
280 PRK08324 short chain dehydroge 97.7 0.00024 5.3E-09 74.4 10.3 119 271-399 385-508 (681)
281 PRK08265 short chain dehydroge 97.6 0.00041 9E-09 63.7 10.5 83 316-399 5-90 (261)
282 TIGR03325 BphB_TodD cis-2,3-di 97.6 0.00037 8E-09 64.0 10.1 83 316-399 4-89 (262)
283 PRK06200 2,3-dihydroxy-2,3-dih 97.6 0.00042 9.1E-09 63.7 10.5 84 316-400 5-91 (263)
284 PRK06198 short chain dehydroge 97.6 0.00045 9.7E-09 63.3 10.3 85 316-400 5-95 (260)
285 PRK08267 short chain dehydroge 97.6 0.00047 1E-08 63.2 10.4 82 318-400 2-88 (260)
286 PRK07904 short chain dehydroge 97.6 0.00059 1.3E-08 62.4 10.8 86 315-400 6-98 (253)
287 PRK07831 short chain dehydroge 97.6 0.0006 1.3E-08 62.6 10.5 86 314-400 14-108 (262)
288 cd05195 enoyl_red enoyl reduct 97.6 5.8E-05 1.3E-09 69.8 3.7 216 1-224 7-287 (293)
289 PRK07825 short chain dehydroge 97.6 0.00052 1.1E-08 63.4 10.1 82 317-400 5-89 (273)
290 PRK07890 short chain dehydroge 97.6 0.00065 1.4E-08 62.1 10.6 85 315-400 3-93 (258)
291 PRK07062 short chain dehydroge 97.5 0.00068 1.5E-08 62.3 10.6 84 316-400 7-98 (265)
292 PRK05866 short chain dehydroge 97.5 0.00072 1.6E-08 63.3 10.8 83 317-400 40-128 (293)
293 PRK05693 short chain dehydroge 97.5 0.00063 1.4E-08 62.9 10.2 79 318-399 2-82 (274)
294 PRK08213 gluconate 5-dehydroge 97.5 0.00072 1.6E-08 61.9 10.5 83 316-399 11-99 (259)
295 PRK07677 short chain dehydroge 97.5 0.0007 1.5E-08 61.7 10.3 83 317-400 1-89 (252)
296 PRK05867 short chain dehydroge 97.5 0.00067 1.5E-08 61.9 10.2 84 316-400 8-97 (253)
297 PRK08628 short chain dehydroge 97.5 0.00078 1.7E-08 61.6 10.6 83 316-399 6-93 (258)
298 PRK07109 short chain dehydroge 97.5 0.00074 1.6E-08 64.5 10.8 84 316-400 7-96 (334)
299 PRK07231 fabG 3-ketoacyl-(acyl 97.5 0.00079 1.7E-08 61.1 10.6 83 316-399 4-91 (251)
300 PRK07576 short chain dehydroge 97.5 0.00086 1.9E-08 61.7 10.8 83 316-399 8-96 (264)
301 PRK06194 hypothetical protein; 97.5 0.00082 1.8E-08 62.5 10.8 83 317-400 6-94 (287)
302 PRK05876 short chain dehydroge 97.5 0.00082 1.8E-08 62.3 10.7 84 316-400 5-94 (275)
303 PRK08177 short chain dehydroge 97.5 0.00059 1.3E-08 61.1 9.4 80 318-400 2-82 (225)
304 PRK08862 short chain dehydroge 97.5 0.0008 1.7E-08 60.5 10.1 83 316-399 4-93 (227)
305 PRK12939 short chain dehydroge 97.5 0.00085 1.8E-08 60.9 10.5 84 316-400 6-95 (250)
306 PRK07063 short chain dehydroge 97.5 0.00086 1.9E-08 61.4 10.5 84 316-400 6-97 (260)
307 PRK06182 short chain dehydroge 97.5 0.00071 1.5E-08 62.5 9.9 81 317-400 3-85 (273)
308 TIGR01832 kduD 2-deoxy-D-gluco 97.5 0.00095 2.1E-08 60.6 10.6 84 316-400 4-91 (248)
309 PRK12829 short chain dehydroge 97.5 0.00063 1.4E-08 62.3 9.5 85 315-400 9-97 (264)
310 PRK06172 short chain dehydroge 97.5 0.00097 2.1E-08 60.8 10.6 84 316-400 6-95 (253)
311 PRK05854 short chain dehydroge 97.5 0.00091 2E-08 63.3 10.6 84 316-400 13-104 (313)
312 PRK06138 short chain dehydroge 97.5 0.00097 2.1E-08 60.7 10.5 84 316-400 4-92 (252)
313 PRK06180 short chain dehydroge 97.5 0.00099 2.1E-08 61.8 10.7 83 317-400 4-89 (277)
314 cd08247 AST1_like AST1 is a cy 97.5 0.00011 2.3E-09 70.7 4.2 226 1-231 35-350 (352)
315 PRK06114 short chain dehydroge 97.5 0.001 2.2E-08 60.8 10.5 84 316-400 7-97 (254)
316 PRK12481 2-deoxy-D-gluconate 3 97.5 0.001 2.2E-08 60.8 10.4 84 316-400 7-94 (251)
317 PRK08251 short chain dehydroge 97.5 0.0011 2.4E-08 60.2 10.6 83 317-400 2-92 (248)
318 PRK05786 fabG 3-ketoacyl-(acyl 97.5 0.00098 2.1E-08 60.1 10.2 83 316-399 4-91 (238)
319 PRK12771 putative glutamate sy 97.5 0.00037 8E-09 71.5 8.2 85 313-405 133-238 (564)
320 PRK06720 hypothetical protein; 97.5 0.0014 3.1E-08 55.9 10.5 84 316-400 15-104 (169)
321 PRK06841 short chain dehydroge 97.5 0.00099 2.2E-08 60.8 10.3 84 316-400 14-100 (255)
322 PRK12823 benD 1,6-dihydroxycyc 97.5 0.00092 2E-08 61.2 10.1 83 316-399 7-94 (260)
323 PRK05717 oxidoreductase; Valid 97.5 0.0011 2.4E-08 60.5 10.6 84 316-400 9-95 (255)
324 PRK06949 short chain dehydroge 97.4 0.0011 2.4E-08 60.6 10.5 84 315-399 7-96 (258)
325 PRK09242 tropinone reductase; 97.4 0.0012 2.7E-08 60.3 10.8 83 316-399 8-98 (257)
326 PRK08264 short chain dehydroge 97.4 0.00094 2E-08 60.2 9.8 78 316-399 5-83 (238)
327 PRK07523 gluconate 5-dehydroge 97.4 0.0012 2.6E-08 60.3 10.6 84 316-400 9-98 (255)
328 PRK05653 fabG 3-ketoacyl-(acyl 97.4 0.0011 2.5E-08 59.8 10.3 82 317-399 5-92 (246)
329 PRK07791 short chain dehydroge 97.4 0.0011 2.4E-08 61.8 10.4 85 315-400 4-103 (286)
330 PRK06101 short chain dehydroge 97.4 0.00099 2.1E-08 60.3 9.8 79 318-399 2-81 (240)
331 PRK12938 acetyacetyl-CoA reduc 97.4 0.0011 2.4E-08 60.1 10.2 84 317-400 3-92 (246)
332 PRK08643 acetoin reductase; Va 97.4 0.0012 2.7E-08 60.2 10.6 83 317-400 2-90 (256)
333 PRK07792 fabG 3-ketoacyl-(acyl 97.4 0.0012 2.6E-08 62.3 10.6 84 316-400 11-100 (306)
334 PRK07035 short chain dehydroge 97.4 0.0014 2.9E-08 59.8 10.6 83 316-399 7-95 (252)
335 PRK08226 short chain dehydroge 97.4 0.0013 2.9E-08 60.3 10.6 83 316-399 5-92 (263)
336 PRK06181 short chain dehydroge 97.4 0.0014 3E-08 60.2 10.7 82 318-400 2-89 (263)
337 PRK07774 short chain dehydroge 97.4 0.0014 3.1E-08 59.5 10.7 83 316-399 5-93 (250)
338 PRK06125 short chain dehydroge 97.4 0.0014 3E-08 60.0 10.7 81 316-400 6-92 (259)
339 PRK06196 oxidoreductase; Provi 97.4 0.001 2.2E-08 63.0 9.9 82 316-399 25-109 (315)
340 PRK10538 malonic semialdehyde 97.4 0.0013 2.8E-08 59.8 10.3 81 319-400 2-85 (248)
341 PRK05476 S-adenosyl-L-homocyst 97.4 0.00069 1.5E-08 66.0 8.8 83 305-404 198-282 (425)
342 PRK07024 short chain dehydroge 97.4 0.0015 3.1E-08 59.9 10.5 83 317-400 2-89 (257)
343 PRK08589 short chain dehydroge 97.4 0.0014 3.1E-08 60.5 10.4 83 316-400 5-93 (272)
344 PRK06057 short chain dehydroge 97.4 0.0012 2.6E-08 60.3 9.8 82 316-400 6-90 (255)
345 PRK07453 protochlorophyllide o 97.4 0.0015 3.2E-08 62.1 10.7 83 316-399 5-93 (322)
346 PRK07067 sorbitol dehydrogenas 97.4 0.0016 3.4E-08 59.6 10.6 83 317-400 6-91 (257)
347 PRK08277 D-mannonate oxidoredu 97.4 0.0014 3.1E-08 60.6 10.4 83 316-399 9-97 (278)
348 PRK06940 short chain dehydroge 97.4 0.0014 3E-08 60.7 10.3 82 317-400 2-87 (275)
349 PRK13394 3-hydroxybutyrate deh 97.4 0.0017 3.8E-08 59.3 10.8 84 316-400 6-95 (262)
350 PRK06484 short chain dehydroge 97.4 0.0012 2.5E-08 67.2 10.5 85 315-400 267-354 (520)
351 PRK07666 fabG 3-ketoacyl-(acyl 97.4 0.0019 4E-08 58.4 10.7 83 317-400 7-95 (239)
352 PRK06124 gluconate 5-dehydroge 97.3 0.0019 4.2E-08 58.9 10.8 84 316-400 10-99 (256)
353 PRK08085 gluconate 5-dehydroge 97.3 0.0018 3.9E-08 59.1 10.6 83 316-399 8-96 (254)
354 PRK12936 3-ketoacyl-(acyl-carr 97.3 0.0019 4E-08 58.4 10.6 84 316-400 5-91 (245)
355 KOG1205|consensus 97.3 0.0017 3.6E-08 59.5 9.9 85 316-401 11-103 (282)
356 PRK06482 short chain dehydroge 97.3 0.0018 3.9E-08 59.9 10.5 82 318-400 3-87 (276)
357 PRK07097 gluconate 5-dehydroge 97.3 0.0019 4.2E-08 59.3 10.6 84 316-400 9-98 (265)
358 PRK07832 short chain dehydroge 97.3 0.0014 3.1E-08 60.5 9.8 81 319-400 2-89 (272)
359 PLN02780 ketoreductase/ oxidor 97.3 0.0016 3.4E-08 61.9 10.1 82 316-400 52-143 (320)
360 PRK07454 short chain dehydroge 97.3 0.0024 5.2E-08 57.7 11.1 84 315-399 4-93 (241)
361 PRK08303 short chain dehydroge 97.3 0.0017 3.7E-08 61.1 10.3 83 316-399 7-106 (305)
362 PRK05875 short chain dehydroge 97.3 0.002 4.4E-08 59.5 10.7 82 317-399 7-96 (276)
363 PRK06197 short chain dehydroge 97.3 0.0019 4E-08 60.9 10.5 84 316-400 15-106 (306)
364 PRK08017 oxidoreductase; Provi 97.3 0.0016 3.5E-08 59.3 9.9 79 318-399 3-84 (256)
365 PRK12743 oxidoreductase; Provi 97.3 0.0021 4.6E-08 58.7 10.6 83 317-400 2-91 (256)
366 PRK08063 enoyl-(acyl carrier p 97.3 0.0021 4.5E-08 58.4 10.4 84 316-399 3-92 (250)
367 PRK12429 3-hydroxybutyrate deh 97.3 0.0024 5.2E-08 58.2 10.8 83 316-399 3-91 (258)
368 PRK06484 short chain dehydroge 97.3 0.0016 3.4E-08 66.3 10.4 83 316-399 4-89 (520)
369 PRK09186 flagellin modificatio 97.3 0.002 4.4E-08 58.7 10.2 83 316-399 3-93 (256)
370 PRK06505 enoyl-(acyl carrier p 97.3 0.0018 3.9E-08 59.9 10.0 83 316-400 6-96 (271)
371 PRK08278 short chain dehydroge 97.3 0.0019 4E-08 59.8 10.0 84 316-400 5-101 (273)
372 PRK12826 3-ketoacyl-(acyl-carr 97.3 0.0022 4.8E-08 58.2 10.4 84 316-400 5-94 (251)
373 PRK06953 short chain dehydroge 97.3 0.0017 3.7E-08 57.9 9.4 79 318-400 2-81 (222)
374 PRK06935 2-deoxy-D-gluconate 3 97.3 0.0025 5.4E-08 58.3 10.7 83 316-400 14-102 (258)
375 PRK07856 short chain dehydroge 97.3 0.0019 4.1E-08 58.9 9.8 80 316-400 5-86 (252)
376 PLN02253 xanthoxin dehydrogena 97.3 0.0022 4.7E-08 59.5 10.4 84 316-400 17-105 (280)
377 PRK07806 short chain dehydroge 97.3 0.0025 5.5E-08 57.8 10.5 84 316-400 5-95 (248)
378 PRK12828 short chain dehydroge 97.3 0.0019 4.2E-08 58.0 9.7 82 316-400 6-93 (239)
379 PRK06113 7-alpha-hydroxysteroi 97.3 0.0027 5.9E-08 57.9 10.7 83 316-399 10-98 (255)
380 PRK08993 2-deoxy-D-gluconate 3 97.3 0.0025 5.4E-08 58.2 10.4 83 317-400 10-96 (253)
381 PRK12384 sorbitol-6-phosphate 97.2 0.0023 5E-08 58.5 10.2 83 317-400 2-92 (259)
382 PRK12745 3-ketoacyl-(acyl-carr 97.2 0.0024 5.2E-08 58.2 10.2 82 318-400 3-91 (256)
383 PRK08263 short chain dehydroge 97.2 0.0025 5.5E-08 58.9 10.5 83 317-400 3-88 (275)
384 PRK06079 enoyl-(acyl carrier p 97.2 0.0022 4.8E-08 58.5 9.9 84 316-400 6-94 (252)
385 TIGR02415 23BDH acetoin reduct 97.2 0.0027 5.8E-08 57.8 10.5 82 318-400 1-88 (254)
386 PRK12746 short chain dehydroge 97.2 0.0023 4.9E-08 58.3 10.0 84 317-400 6-101 (254)
387 KOG1199|consensus 97.2 0.0016 3.5E-08 54.1 7.8 90 315-405 7-99 (260)
388 PRK07326 short chain dehydroge 97.2 0.0026 5.6E-08 57.2 10.1 84 316-400 5-93 (237)
389 PRK08306 dipicolinate synthase 97.2 0.0019 4.1E-08 60.4 9.2 70 316-399 151-220 (296)
390 PRK06914 short chain dehydroge 97.2 0.0027 5.7E-08 58.9 10.3 82 317-400 3-92 (280)
391 PRK08340 glucose-1-dehydrogena 97.2 0.0028 6.1E-08 58.0 10.3 80 319-400 2-87 (259)
392 PRK07074 short chain dehydroge 97.2 0.0034 7.5E-08 57.3 10.7 83 317-400 2-88 (257)
393 PRK07060 short chain dehydroge 97.2 0.0023 5E-08 57.9 9.5 79 316-400 8-88 (245)
394 PRK05650 short chain dehydroge 97.2 0.0032 7E-08 58.0 10.6 81 319-400 2-88 (270)
395 PRK06128 oxidoreductase; Provi 97.2 0.0029 6.4E-08 59.4 10.4 83 316-399 54-144 (300)
396 PRK06463 fabG 3-ketoacyl-(acyl 97.2 0.0029 6.2E-08 57.8 10.0 82 316-400 6-90 (255)
397 TIGR00936 ahcY adenosylhomocys 97.2 0.0017 3.6E-08 63.0 8.6 75 314-405 192-266 (406)
398 PRK05855 short chain dehydroge 97.2 0.0026 5.7E-08 65.3 10.7 84 316-400 314-403 (582)
399 PRK12937 short chain dehydroge 97.2 0.0037 7.9E-08 56.6 10.5 84 316-400 4-94 (245)
400 PRK08642 fabG 3-ketoacyl-(acyl 97.2 0.0035 7.6E-08 57.0 10.4 82 317-399 5-91 (253)
401 PRK07775 short chain dehydroge 97.1 0.0043 9.3E-08 57.4 10.9 84 316-400 9-98 (274)
402 PRK05557 fabG 3-ketoacyl-(acyl 97.1 0.0037 8.1E-08 56.4 10.3 83 316-399 4-93 (248)
403 PRK06701 short chain dehydroge 97.1 0.0038 8.2E-08 58.3 10.5 85 315-400 44-135 (290)
404 TIGR03206 benzo_BadH 2-hydroxy 97.1 0.0043 9.2E-08 56.3 10.6 83 316-399 2-90 (250)
405 TIGR01963 PHB_DH 3-hydroxybuty 97.1 0.0041 8.8E-08 56.6 10.4 82 318-400 2-89 (255)
406 PRK08594 enoyl-(acyl carrier p 97.1 0.0034 7.3E-08 57.5 9.7 84 316-400 6-98 (257)
407 PRK09134 short chain dehydroge 97.1 0.0047 1E-07 56.5 10.7 83 316-399 8-97 (258)
408 PRK12935 acetoacetyl-CoA reduc 97.1 0.0041 8.8E-08 56.4 10.1 83 317-400 6-95 (247)
409 KOG1209|consensus 97.1 0.0019 4.2E-08 55.7 7.2 87 315-403 5-95 (289)
410 PRK07102 short chain dehydroge 97.1 0.0039 8.4E-08 56.4 9.9 80 318-400 2-87 (243)
411 PRK06398 aldose dehydrogenase; 97.1 0.0025 5.4E-08 58.4 8.7 76 317-400 6-83 (258)
412 PLN03209 translocon at the inn 97.1 0.0038 8.2E-08 62.9 10.3 83 311-400 74-170 (576)
413 PRK09291 short chain dehydroge 97.1 0.0029 6.2E-08 57.7 9.0 77 317-399 2-83 (257)
414 PRK06603 enoyl-(acyl carrier p 97.1 0.0038 8.3E-08 57.3 9.8 83 316-400 7-97 (260)
415 PRK07533 enoyl-(acyl carrier p 97.1 0.004 8.7E-08 57.0 9.9 83 316-400 9-99 (258)
416 PRK07984 enoyl-(acyl carrier p 97.1 0.0046 9.9E-08 56.9 10.2 83 316-400 5-95 (262)
417 PRK09730 putative NAD(P)-bindi 97.1 0.0047 1E-07 55.9 10.2 83 318-400 2-90 (247)
418 PRK06947 glucose-1-dehydrogena 97.1 0.0045 9.7E-08 56.1 10.1 82 318-400 3-91 (248)
419 PRK08415 enoyl-(acyl carrier p 97.1 0.0044 9.5E-08 57.4 10.1 83 316-400 4-94 (274)
420 PRK12742 oxidoreductase; Provi 97.1 0.0033 7.2E-08 56.5 9.1 79 316-400 5-86 (237)
421 PRK06483 dihydromonapterin red 97.0 0.0047 1E-07 55.6 10.0 80 317-399 2-84 (236)
422 PRK08703 short chain dehydroge 97.0 0.0035 7.6E-08 56.6 9.1 83 316-400 5-98 (239)
423 PRK06523 short chain dehydroge 97.0 0.0037 8E-08 57.2 9.3 78 316-399 8-87 (260)
424 KOG1201|consensus 97.0 0.005 1.1E-07 56.2 9.7 84 315-401 36-126 (300)
425 PRK07577 short chain dehydroge 97.0 0.0031 6.7E-08 56.6 8.5 76 317-400 3-79 (234)
426 PRK13940 glutamyl-tRNA reducta 97.0 0.0032 7E-08 61.5 9.0 76 315-402 179-255 (414)
427 PRK07370 enoyl-(acyl carrier p 97.0 0.0046 9.9E-08 56.7 9.6 84 316-400 5-98 (258)
428 PRK07985 oxidoreductase; Provi 97.0 0.0052 1.1E-07 57.5 10.0 83 316-399 48-138 (294)
429 KOG0725|consensus 97.0 0.0059 1.3E-07 56.3 10.1 86 315-401 6-101 (270)
430 PRK06179 short chain dehydroge 97.0 0.0035 7.6E-08 57.7 8.7 79 317-400 4-84 (270)
431 PRK08690 enoyl-(acyl carrier p 97.0 0.0053 1.2E-07 56.3 9.8 83 316-400 5-95 (261)
432 PRK05884 short chain dehydroge 97.0 0.0054 1.2E-07 54.8 9.6 75 319-398 2-78 (223)
433 PRK05565 fabG 3-ketoacyl-(acyl 97.0 0.0067 1.4E-07 54.8 10.3 83 317-400 5-94 (247)
434 PF13460 NAD_binding_10: NADH( 97.0 0.0066 1.4E-07 52.3 9.8 69 320-399 1-70 (183)
435 KOG1014|consensus 97.0 0.0047 1E-07 56.6 8.9 83 315-401 47-138 (312)
436 PRK12825 fabG 3-ketoacyl-(acyl 96.9 0.0071 1.5E-07 54.6 10.3 82 317-399 6-94 (249)
437 PRK08936 glucose-1-dehydrogena 96.9 0.0076 1.7E-07 55.2 10.4 84 316-400 6-96 (261)
438 TIGR01829 AcAcCoA_reduct aceto 96.9 0.008 1.7E-07 54.2 10.3 82 318-400 1-89 (242)
439 PRK05599 hypothetical protein; 96.9 0.0072 1.6E-07 54.9 10.0 80 319-400 2-88 (246)
440 PRK08416 7-alpha-hydroxysteroi 96.9 0.0074 1.6E-07 55.3 10.1 83 316-399 7-97 (260)
441 TIGR00518 alaDH alanine dehydr 96.9 0.0061 1.3E-07 58.9 9.8 73 317-399 167-240 (370)
442 PRK07023 short chain dehydroge 96.9 0.0055 1.2E-07 55.4 9.1 80 319-400 3-88 (243)
443 TIGR01289 LPOR light-dependent 96.9 0.0088 1.9E-07 56.6 10.7 83 317-399 3-91 (314)
444 PRK06171 sorbitol-6-phosphate 96.9 0.0049 1.1E-07 56.6 8.8 79 316-400 8-88 (266)
445 PRK08220 2,3-dihydroxybenzoate 96.9 0.0072 1.6E-07 54.9 9.9 79 316-400 7-87 (252)
446 PRK06123 short chain dehydroge 96.9 0.008 1.7E-07 54.4 10.1 83 317-400 2-91 (248)
447 PRK07889 enoyl-(acyl carrier p 96.9 0.0066 1.4E-07 55.6 9.6 84 316-400 6-96 (256)
448 TIGR02632 RhaD_aldol-ADH rhamn 96.9 0.0073 1.6E-07 63.2 11.0 84 316-400 413-504 (676)
449 PRK12827 short chain dehydroge 96.9 0.0088 1.9E-07 54.1 10.4 84 317-401 6-99 (249)
450 KOG2017|consensus 96.9 0.0027 5.8E-08 58.6 6.6 81 316-402 65-169 (427)
451 PRK08219 short chain dehydroge 96.9 0.0071 1.5E-07 53.9 9.6 78 318-400 4-82 (227)
452 PRK08945 putative oxoacyl-(acy 96.9 0.0087 1.9E-07 54.3 10.2 86 314-400 9-103 (247)
453 PRK09135 pteridine reductase; 96.9 0.0099 2.1E-07 53.8 10.6 83 316-399 5-95 (249)
454 PRK12747 short chain dehydroge 96.8 0.011 2.3E-07 53.8 10.6 83 316-399 3-98 (252)
455 smart00822 PKS_KR This enzymat 96.8 0.012 2.5E-07 49.9 10.0 82 318-399 1-91 (180)
456 PRK12744 short chain dehydroge 96.8 0.01 2.2E-07 54.2 10.2 82 317-399 8-99 (257)
457 PRK06077 fabG 3-ketoacyl-(acyl 96.8 0.012 2.5E-07 53.5 10.5 82 317-399 6-94 (252)
458 PRK06997 enoyl-(acyl carrier p 96.8 0.007 1.5E-07 55.5 8.9 83 316-400 5-95 (260)
459 PRK07201 short chain dehydroge 96.8 0.0079 1.7E-07 63.0 10.4 82 317-399 371-458 (657)
460 PRK08159 enoyl-(acyl carrier p 96.8 0.011 2.4E-07 54.7 10.2 84 315-400 8-99 (272)
461 TIGR02853 spore_dpaA dipicolin 96.8 0.0078 1.7E-07 56.0 9.1 69 316-398 150-218 (287)
462 PRK12748 3-ketoacyl-(acyl-carr 96.8 0.013 2.8E-07 53.5 10.4 82 317-399 5-105 (256)
463 PRK12859 3-ketoacyl-(acyl-carr 96.7 0.013 2.8E-07 53.5 10.3 84 316-400 5-107 (256)
464 TIGR01830 3oxo_ACP_reduc 3-oxo 96.7 0.01 2.2E-07 53.3 9.2 80 320-400 1-87 (239)
465 PRK07041 short chain dehydroge 96.7 0.011 2.3E-07 53.0 9.0 75 321-399 1-79 (230)
466 PLN02494 adenosylhomocysteinas 96.7 0.0068 1.5E-07 59.5 8.0 72 315-403 252-323 (477)
467 PRK12367 short chain dehydroge 96.6 0.01 2.2E-07 53.9 8.8 74 317-399 14-89 (245)
468 PRK12548 shikimate 5-dehydroge 96.6 0.0097 2.1E-07 55.5 8.5 77 316-398 125-208 (289)
469 KOG1200|consensus 96.6 0.017 3.8E-07 49.2 8.9 83 317-400 14-101 (256)
470 PRK13656 trans-2-enoyl-CoA red 96.6 0.02 4.3E-07 54.9 10.4 84 315-400 39-142 (398)
471 PRK12824 acetoacetyl-CoA reduc 96.6 0.019 4.1E-07 51.8 10.1 82 318-400 3-91 (245)
472 KOG1207|consensus 96.6 0.0087 1.9E-07 50.0 6.8 82 316-400 6-88 (245)
473 PRK07069 short chain dehydroge 96.6 0.015 3.2E-07 52.7 9.3 80 320-400 2-90 (251)
474 PRK07424 bifunctional sterol d 96.5 0.017 3.7E-07 56.4 9.9 77 316-400 177-256 (406)
475 TIGR02356 adenyl_thiF thiazole 96.5 0.027 5.8E-07 49.6 10.1 35 316-350 20-54 (202)
476 TIGR01809 Shik-DH-AROM shikima 96.5 0.01 2.3E-07 55.1 7.8 77 316-401 124-202 (282)
477 TIGR01500 sepiapter_red sepiap 96.5 0.021 4.6E-07 52.1 9.8 80 319-399 2-97 (256)
478 TIGR02813 omega_3_PfaA polyket 96.4 0.019 4.1E-07 67.9 11.2 87 313-400 1993-2132(2582)
479 PLN02657 3,8-divinyl protochlo 96.4 0.023 5E-07 55.5 10.2 82 313-399 56-146 (390)
480 PRK04148 hypothetical protein; 96.4 0.035 7.5E-07 45.0 9.4 83 316-403 16-116 (134)
481 PRK12550 shikimate 5-dehydroge 96.4 0.016 3.6E-07 53.3 8.4 45 314-358 119-163 (272)
482 TIGR02685 pter_reduc_Leis pter 96.3 0.021 4.6E-07 52.5 9.0 81 318-399 2-94 (267)
483 PLN00015 protochlorophyllide r 96.3 0.023 5E-07 53.5 9.3 79 321-400 1-86 (308)
484 TIGR01831 fabG_rel 3-oxoacyl-( 96.3 0.028 6E-07 50.6 9.5 79 320-399 1-86 (239)
485 COG0373 HemA Glutamyl-tRNA red 96.3 0.02 4.4E-07 55.3 8.8 74 316-402 177-251 (414)
486 PRK00258 aroE shikimate 5-dehy 96.3 0.014 3E-07 54.2 7.5 74 316-400 122-196 (278)
487 PRK12549 shikimate 5-dehydroge 96.3 0.026 5.7E-07 52.4 9.3 42 316-357 126-167 (284)
488 PRK08223 hypothetical protein; 96.3 0.026 5.6E-07 52.0 8.9 35 316-350 26-60 (287)
489 PRK06924 short chain dehydroge 96.2 0.032 7E-07 50.6 9.5 82 318-400 2-91 (251)
490 KOG1208|consensus 96.2 0.046 1E-06 51.4 10.6 86 315-401 33-126 (314)
491 TIGR02355 moeB molybdopterin s 96.2 0.043 9.3E-07 49.6 10.0 34 317-350 24-57 (240)
492 PF00899 ThiF: ThiF family; I 96.2 0.032 6.8E-07 45.6 8.3 34 317-350 2-35 (135)
493 TIGR02622 CDP_4_6_dhtase CDP-g 96.2 0.029 6.2E-07 53.9 9.4 79 316-399 3-85 (349)
494 cd01078 NAD_bind_H4MPT_DH NADP 96.2 0.035 7.6E-07 48.4 9.0 77 316-401 27-109 (194)
495 CHL00194 ycf39 Ycf39; Provisio 96.1 0.03 6.5E-07 53.0 9.2 72 319-399 2-74 (317)
496 PF03435 Saccharop_dh: Sacchar 96.1 0.028 6.1E-07 54.8 9.1 75 320-400 1-78 (386)
497 KOG1611|consensus 96.1 0.014 3E-07 51.1 6.0 86 318-403 4-98 (249)
498 TIGR03589 PseB UDP-N-acetylglu 96.1 0.047 1E-06 51.9 10.3 77 317-399 4-84 (324)
499 PRK12475 thiamine/molybdopteri 96.1 0.048 1E-06 52.0 10.2 34 317-350 24-57 (338)
500 PLN02989 cinnamyl-alcohol dehy 96.1 0.033 7.3E-07 52.7 9.2 78 315-399 3-87 (325)
No 1
>KOG0024|consensus
Probab=100.00 E-value=2.7e-38 Score=281.89 Aligned_cols=255 Identities=59% Similarity=1.018 Sum_probs=238.8
Q ss_pred cCCcceeccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHH
Q psy1413 64 CLSPILRRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHL 142 (408)
Q Consensus 64 ~~~~~~~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~ 142 (408)
....++.++.++.+ +..+.|.. .+.++++....++++|+++..+-.|.+|...+..+..+|+|..|++..+|..++.+
T Consensus 5 ~~A~vl~g~~di~i-~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~L 83 (354)
T KOG0024|consen 5 NLALVLRGKGDIRI-EQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHL 83 (354)
T ss_pred cceeEEEccCceeE-eeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhccccccc
Confidence 45678899999999 58888776 78889999999999999999999999999999999999999999999999877766
Q ss_pred hhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcC
Q psy1413 143 KATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTG 222 (408)
Q Consensus 143 ~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~ 222 (408)
+.
T Consensus 84 kV------------------------------------------------------------------------------ 85 (354)
T KOG0024|consen 84 KV------------------------------------------------------------------------------ 85 (354)
T ss_pred cc------------------------------------------------------------------------------
Confidence 66
Q ss_pred CCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchh
Q psy1413 223 AGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPL 302 (408)
Q Consensus 223 ~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~ 302 (408)
+|||+++|.-+|+.|..|++|++|.|+...+.++++.+|++++|++++++.++++|+++|++++|+++++
T Consensus 86 ----------GDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KLPd~vs~eeGAl~ePL 155 (354)
T KOG0024|consen 86 ----------GDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKLPDNVSFEEGALIEPL 155 (354)
T ss_pred ----------CCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeCCCCCchhhcccccch
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHH
Q psy1413 303 SVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHII 382 (408)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~ 382 (408)
++++|+.++..+++++++||+|+|++|+....+|+++||..|++++-.+.|++.++++|++.+++.....+.+++.+.++
T Consensus 156 sV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~ 235 (354)
T KOG0024|consen 156 SVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVE 235 (354)
T ss_pred hhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999988777556788888998
Q ss_pred HHhcCCCCceEEEcccchhhhhhcC
Q psy1413 383 ELLQGEQPDKTIDCSGIESTIKLGM 407 (408)
Q Consensus 383 ~~~~~~~~d~i~d~~g~~~~~~~~~ 407 (408)
.+.+.+.+|+.|||+|...+++.|+
T Consensus 236 ~~~g~~~~d~~~dCsG~~~~~~aai 260 (354)
T KOG0024|consen 236 KALGKKQPDVTFDCSGAEVTIRAAI 260 (354)
T ss_pred hhccccCCCeEEEccCchHHHHHHH
Confidence 8887678999999999999988775
No 2
>KOG0024|consensus
Probab=100.00 E-value=5.6e-39 Score=286.25 Aligned_cols=233 Identities=41% Similarity=0.648 Sum_probs=202.0
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR------------------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~------------------- 61 (408)
++++|||+||+|.|.+|+.+.+..+.|+++|||.+|+|+++|+.|+++|+||||++.|...
T Consensus 36 i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~ 115 (354)
T KOG0024|consen 36 IKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMV 115 (354)
T ss_pred eeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccc
Confidence 5799999999999999998888888999999999999999999999999999999887432
Q ss_pred ---------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC
Q psy1413 62 ---------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH 126 (408)
Q Consensus 62 ---------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~ 126 (408)
...++.|+..|+++++ ++.++.++++..+.+...+.--.|++++|+|+|++|+.+...|+++|+
T Consensus 116 f~atpp~~G~la~y~~~~~dfc~KLPd~vs~-eeGAl~ePLsV~~HAcr~~~vk~Gs~vLV~GAGPIGl~t~l~Aka~GA 194 (354)
T KOG0024|consen 116 FCATPPVDGTLAEYYVHPADFCYKLPDNVSF-EEGALIEPLSVGVHACRRAGVKKGSKVLVLGAGPIGLLTGLVAKAMGA 194 (354)
T ss_pred cccCCCcCCceEEEEEechHheeeCCCCCch-hhcccccchhhhhhhhhhcCcccCCeEEEECCcHHHHHHHHHHHHcCC
Confidence 2233466777888888 666777777766654443333358999999999999999888888876
Q ss_pred -----------------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEcc
Q psy1413 127 -----------------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGA 156 (408)
Q Consensus 127 -----------------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~ 156 (408)
..+.++++.|... .++..++.+|+++++|+
T Consensus 195 ~~VVi~d~~~~Rle~Ak~~Ga~~~~~~~~~~~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~ 274 (354)
T KOG0024|consen 195 SDVVITDLVANRLELAKKFGATVTDPSSHKSSPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGM 274 (354)
T ss_pred CcEEEeecCHHHHHHHHHhCCeEEeeccccccHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEecc
Confidence 2555677777554 67999999999999999
Q ss_pred CCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 157 GSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
.....++++..+..|++++.|++.+. .+|+.+++++++|++++++||||+|++++..+||+.+.+++...+|+++++.
T Consensus 275 g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 275 GAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred CCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 99999999999999999999999997 6999999999999999999999999999999999999999999999999864
No 3
>KOG0023|consensus
Probab=100.00 E-value=2.8e-35 Score=261.93 Aligned_cols=157 Identities=26% Similarity=0.417 Sum_probs=126.0
Q ss_pred cccccccccCCccccccceeecccC------CCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhh-hhhccCcC
Q psy1413 243 PCRTCTYCKEGRYNLCRQIFFCATP------PDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVH-ACRRAGVT 315 (408)
Q Consensus 243 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~-~~~~~~~~ 315 (408)
+|++|++|.++.+++|++..+..+. ...|+||+|.++++..+++||+++++++||++.|++.++| +|.+..+.
T Consensus 101 sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspLk~~g~~ 180 (360)
T KOG0023|consen 101 SCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPLKRSGLG 180 (360)
T ss_pred cccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehhHHcCCC
Confidence 3889999999999999974443222 2457799999999999999999999999999999888666 56888899
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh-hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILE-HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 394 (408)
|+.++.|.|+||+|++++|+++++|.| |++++++. +|.+..+.+||+..++..+ ..++.+.+...+++ ++|.+.
T Consensus 181 pG~~vgI~GlGGLGh~aVq~AKAMG~r-V~vis~~~~kkeea~~~LGAd~fv~~~~---d~d~~~~~~~~~dg-~~~~v~ 255 (360)
T KOG0023|consen 181 PGKWVGIVGLGGLGHMAVQYAKAMGMR-VTVISTSSKKKEEAIKSLGADVFVDSTE---DPDIMKAIMKTTDG-GIDTVS 255 (360)
T ss_pred CCcEEEEecCcccchHHHHHHHHhCcE-EEEEeCCchhHHHHHHhcCcceeEEecC---CHHHHHHHHHhhcC-cceeee
Confidence 999999999977999999999999999 88888887 4555568899999999873 17787788777643 444444
Q ss_pred Ecccchhhhhhc
Q psy1413 395 DCSGIESTIKLG 406 (408)
Q Consensus 395 d~~g~~~~~~~~ 406 (408)
+- ....++.+
T Consensus 256 ~~--a~~~~~~~ 265 (360)
T KOG0023|consen 256 NL--AEHALEPL 265 (360)
T ss_pred ec--cccchHHH
Confidence 33 55555544
No 4
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=5.2e-34 Score=262.58 Aligned_cols=221 Identities=26% Similarity=0.308 Sum_probs=171.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEE-ccCcccccCCcceec--------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF-VPEFRNVCLSPILRR-------- 71 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~-~~~~~~~~~~~~~~~-------- 71 (408)
|++|||||||+|.+ .|.++.. .+|+|||||.+|+|+++|++|++||+||||.+ +....|..|.+|..+
T Consensus 35 v~~~GVChsDlH~~-~G~~~~~--~~P~ipGHEivG~V~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~ 111 (339)
T COG1064 35 VEACGVCHTDLHVA-KGDWPVP--KLPLIPGHEIVGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQ 111 (339)
T ss_pred EEEEeecchhhhhh-cCCCCCC--CCCccCCcceEEEEEEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCc
Confidence 57999999999999 4544433 59999999999999999999999999999987 554444434433333
Q ss_pred -------------------------cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC
Q psy1413 72 -------------------------RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH 126 (408)
Q Consensus 72 -------------------------p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~ 126 (408)
|+++++++++++.....|.+.+.....--+|++|+|+|.|++|++++|+|+++|+
T Consensus 112 ~~~gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~~~~pG~~V~I~G~GGlGh~avQ~Aka~ga 191 (339)
T COG1064 112 KITGYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKANVKPGKWVAVVGAGGLGHMAVQYAKAMGA 191 (339)
T ss_pred cccceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCC
Confidence 3333333333333333333332222111248999999999999999999998886
Q ss_pred -------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCC-CC-cccC
Q psy1413 127 -------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGS-QD-VKIP 164 (408)
Q Consensus 127 -------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~-~~-~~~~ 164 (408)
.++.++++++ .. ++++.|+++|+++.+|.+. .+ ..++
T Consensus 192 ~Via~~~~~~K~e~a~~lGAd~~i~~~~~~~~~~~~~~~d~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~ 270 (339)
T COG1064 192 EVIAITRSEEKLELAKKLGADHVINSSDSDALEAVKEIADAIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLP 270 (339)
T ss_pred eEEEEeCChHHHHHHHHhCCcEEEEcCCchhhHHhHhhCcEEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCC
Confidence 1677777777 43 6899999999999999985 44 5688
Q ss_pred HHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 165 LVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 165 ~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
...+++++++|.|+...+ .++++++++..+|++++. +.++++|+|+++||+.|++++..+.
T Consensus 271 ~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~--i~e~~~l~~in~A~~~m~~g~v~gR 332 (339)
T COG1064 271 AFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPE--ILETIPLDEINEAYERMEKGKVRGR 332 (339)
T ss_pred HHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceee--EEeeECHHHHHHHHHHHHcCCeeeE
Confidence 899999999999999888 899999999999999765 4489999999999999999876543
No 5
>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]
Probab=100.00 E-value=1.4e-33 Score=259.74 Aligned_cols=229 Identities=31% Similarity=0.524 Sum_probs=202.1
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV 154 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~ 154 (408)
+.+ ++.+.|.+.+.++++.+.++++|+.++.++- |-.+. ..++...|+|..|+|..+|+.++.++.
T Consensus 16 l~i-~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~-G~~~~--~~~P~ipGHEivG~V~~vG~~V~~~k~---------- 81 (339)
T COG1064 16 LEI-EEVPVPEPGPGEVLIKVEACGVCHTDLHVAK-GDWPV--PKLPLIPGHEIVGTVVEVGEGVTGLKV---------- 81 (339)
T ss_pred ceE-EeccCCCCCCCeEEEEEEEEeecchhhhhhc-CCCCC--CCCCccCCcceEEEEEEecCCCccCCC----------
Confidence 555 6778888999999999999999999998863 22222 238899999999999999987665555
Q ss_pred ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
+|
T Consensus 82 ------------------------------------------------------------------------------GD 83 (339)
T COG1064 82 ------------------------------------------------------------------------------GD 83 (339)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 99
Q ss_pred ceee-cCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhh-hhhhhhhcc
Q psy1413 235 RVAI-EPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS-VGVHACRRA 312 (408)
Q Consensus 235 ~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~-~~~~~~~~~ 312 (408)
+|.+ .+..+|++|++|.+|.+++|++.+..|++ .+|+|+||+++++++++++|++++++.||++.|+. |+|.++++.
T Consensus 84 rVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~-~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGiT~y~alk~~ 162 (339)
T COG1064 84 RVGVGWLVISCGECEYCRSGNENLCPNQKITGYT-TDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKA 162 (339)
T ss_pred EEEecCccCCCCCCccccCcccccCCCcccccee-ecCcceeEEEEchHHeEECCCCCChhhhhhhhcCeeeEeeehhhc
Confidence 9999 88899999999999999999998888886 89999999999999999999999999999999765 578889999
Q ss_pred CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413 313 GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK 392 (408)
Q Consensus 313 ~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~ 392 (408)
.++|+++++|+|.||+|++++|+|+++|++ |++++++++|++.++++||+++++.++ ++..+.+++. +|+
T Consensus 163 ~~~pG~~V~I~G~GGlGh~avQ~Aka~ga~-Via~~~~~~K~e~a~~lGAd~~i~~~~----~~~~~~~~~~-----~d~ 232 (339)
T COG1064 163 NVKPGKWVAVVGAGGLGHMAVQYAKAMGAE-VIAITRSEEKLELAKKLGADHVINSSD----SDALEAVKEI-----ADA 232 (339)
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHcCCe-EEEEeCChHHHHHHHHhCCcEEEEcCC----chhhHHhHhh-----CcE
Confidence 999999999999999999999999999976 999999999999999999999999875 5555555553 999
Q ss_pred EEEcccchhhhhhcC
Q psy1413 393 TIDCSGIESTIKLGM 407 (408)
Q Consensus 393 i~d~~g~~~~~~~~~ 407 (408)
++|+++ ..++++++
T Consensus 233 ii~tv~-~~~~~~~l 246 (339)
T COG1064 233 IIDTVG-PATLEPSL 246 (339)
T ss_pred EEECCC-hhhHHHHH
Confidence 999999 88888765
No 6
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.97 E-value=6.7e-31 Score=236.76 Aligned_cols=133 Identities=27% Similarity=0.366 Sum_probs=121.3
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccchhhhhhh-h-hhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEe
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVH-A-CRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~-~-~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
++|++|.++++..+++++++.+++.++++.|..++-. + ++..++++++++.|.|.|++|++++|-|+..||.+||+++
T Consensus 138 stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD 217 (366)
T COG1062 138 STFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVD 217 (366)
T ss_pred ccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEe
Confidence 5899999999999999999999999999997655444 3 3889999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407 (408)
Q Consensus 349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~ 407 (408)
.+++|+++++++||++++|.++. .++.+.+.++|++ ++|++|||+|+...+.+|+
T Consensus 218 ~~~~Kl~~A~~fGAT~~vn~~~~---~~vv~~i~~~T~g-G~d~~~e~~G~~~~~~~al 272 (366)
T COG1062 218 INPEKLELAKKFGATHFVNPKEV---DDVVEAIVELTDG-GADYAFECVGNVEVMRQAL 272 (366)
T ss_pred CCHHHHHHHHhcCCceeecchhh---hhHHHHHHHhcCC-CCCEEEEccCCHHHHHHHH
Confidence 99999999999999999998871 2799999999965 9999999999999888775
No 7
>KOG0022|consensus
Probab=99.97 E-value=3.4e-29 Score=222.06 Aligned_cols=134 Identities=31% Similarity=0.394 Sum_probs=122.1
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEe
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
.+|+||.+++...+++|++..|++..+++.| .+|.|-+. ..+++++++++.|.|-|++|++++|-++++||.+||.+|
T Consensus 145 StFsEYTVv~~~~v~kId~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvD 224 (375)
T KOG0022|consen 145 STFSEYTVVDDISVAKIDPSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVD 224 (375)
T ss_pred ccceeEEEeecceeEecCCCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEe
Confidence 4799999999999999999999999999985 55566665 779999999999999999999999999999999999999
Q ss_pred cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407 (408)
Q Consensus 349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~ 407 (408)
.+++|.+.++++|+++.+|..+.. +.+.+.++++|+ .|+|+-|||+|+.+++.+|+
T Consensus 225 iN~~Kf~~ak~fGaTe~iNp~d~~--~~i~evi~EmTd-gGvDysfEc~G~~~~m~~al 280 (375)
T KOG0022|consen 225 INPDKFEKAKEFGATEFINPKDLK--KPIQEVIIEMTD-GGVDYSFECIGNVSTMRAAL 280 (375)
T ss_pred cCHHHHHHHHhcCcceecChhhcc--ccHHHHHHHHhc-CCceEEEEecCCHHHHHHHH
Confidence 999999999999999999988532 258999999996 69999999999999998876
No 8
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.96 E-value=1.5e-29 Score=241.63 Aligned_cols=229 Identities=31% Similarity=0.445 Sum_probs=174.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCc-cccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceec--------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPM-IVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRR-------- 71 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~-i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~-------- 71 (408)
|+++|||+||+|.++++. ...++|. ++|||++|+|+++| .++.+|+||||++.+...|..+.+|..+
T Consensus 32 v~~~gICGSDlh~~~g~~---~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv~~~~~Cg~C~~C~~G~~~~C~~~ 107 (350)
T COG1063 32 VTATGICGSDLHIYRGGE---PFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVVEPNIPCGHCRYCRAGEYNLCENP 107 (350)
T ss_pred EEEEeEchhhhhhccCCC---CCCCCCCcccCccceEEEEEec-cccCCCCCCEEEECCCcCCCCChhHhCcCcccCCCc
Confidence 578999999999996543 2234455 99999999999999 7788999999998886543322222111
Q ss_pred ----------------cceeeecccc---cCCCC--CCcceEEEEeeee----------ecCCeEEEEccCccccccccc
Q psy1413 72 ----------------RFSLRFREQK---PIEDP--DDHEVLLEMHCVG----------ICGSDVHYLTHGQIGDFRLSD 120 (408)
Q Consensus 72 ----------------p~~~~~~~~~---~lp~~--~~~~~~~~~~~~~----------~~g~~vlv~g~G~vG~~~i~~ 120 (408)
.+++..+... .+|.. ...+.+.++.+++ ..+++++|+|+|++|++++++
T Consensus 108 ~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~~~~~a~~~~~~~~~~V~V~GaGpIGLla~~~ 187 (350)
T COG1063 108 GFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAERAAVRPGGTVVVVGAGPIGLLAIAL 187 (350)
T ss_pred cccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhhhhhhhhccCCCCCCEEEEECCCHHHHHHHHH
Confidence 1222222111 11221 1112233333333 234589999999999999988
Q ss_pred cccccC--------------------------------------------cceeEEEccCchH---HHHhhccCCcEEEE
Q psy1413 121 PMIVGH--------------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVI 153 (408)
Q Consensus 121 a~~~G~--------------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~ 153 (408)
++.+|+ .++.+++++|... +++++++++|+++.
T Consensus 188 a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D~vie~~G~~~~~~~ai~~~r~gG~v~~ 267 (350)
T COG1063 188 AKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALDQALEALRPGGTVVV 267 (350)
T ss_pred HHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcCCCEEEE
Confidence 887775 3678899999763 79999999999999
Q ss_pred EccCCCCc-ccCHHHHHhcCcEEEEeec-CC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413 154 VGAGSQDV-KIPLVLTMTKEIDIRGVFR-YA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM 230 (408)
Q Consensus 154 ~G~~~~~~-~~~~~~~~~~~~~l~g~~~-~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv 230 (408)
+|.+.... .++...++.|++++.|++. .. .+|+.+++++++|+++++++++|+++++|+++||+.+.+.+....|++
T Consensus 268 vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~lit~~~~~~~~~~a~~~~~~~~~~~~Kv~ 347 (350)
T COG1063 268 VGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLITHRLPLDDAAEAYELFADRKEEAIKVV 347 (350)
T ss_pred EeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHceEeeccHHHHHHHHHHHHhcCCCeEEEE
Confidence 99998776 6888899999999999965 44 789999999999999999999999999999999999999777688998
Q ss_pred EEc
Q psy1413 231 IHC 233 (408)
Q Consensus 231 i~~ 233 (408)
+.+
T Consensus 348 i~~ 350 (350)
T COG1063 348 LKP 350 (350)
T ss_pred ecC
Confidence 763
No 9
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.96 E-value=1.1e-29 Score=243.44 Aligned_cols=229 Identities=24% Similarity=0.367 Sum_probs=171.5
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCC--------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLS-------------- 66 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~-------------- 66 (408)
|+++|||++|++.+..+..+.++.++|.++|||++|+|+++ +|++|++||||.+.+...|..+.
T Consensus 34 v~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~ 111 (343)
T PRK09880 34 ITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMR 111 (343)
T ss_pred EEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcc
Confidence 57999999999988545433334568999999999999999 78999999999876543222211
Q ss_pred ------------------------cceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccc
Q psy1413 67 ------------------------PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPM 122 (408)
Q Consensus 67 ------------------------~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~ 122 (408)
.++..|+++++ +.+.+..++.+++.+........+++++|.|+|++|++++|+++
T Consensus 112 ~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~-~~aa~~~~~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak 190 (343)
T PRK09880 112 FFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADE-KVMAFAEPLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVK 190 (343)
T ss_pred eeecccccCCCCCceeeeEEechHHeEECCCCCCH-HHHHhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 22223333333 22222222222221111111125789999999999999999988
Q ss_pred cccC----------------------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCCC
Q psy1413 123 IVGH----------------------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQ 159 (408)
Q Consensus 123 ~~G~----------------------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~ 159 (408)
.+|+ .++.+++++|... +++++++++|+++.+|.+..
T Consensus 191 ~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~~~~~~~~~~~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~ 270 (343)
T PRK09880 191 TLGAAEIVCADVSPRSLSLAREMGADKLVNPQNDDLDHYKAEKGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA 270 (343)
T ss_pred HcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCcccHHHHhccCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC
Confidence 7764 1466777887642 68999999999999998777
Q ss_pred CcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 160 DVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
..++++..+++|++++.|++...+++++++++++++++++.++++++|+|+|+++||+.+.+++. .+|+++.+
T Consensus 271 ~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~gKvvl~~ 343 (343)
T PRK09880 271 PPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQ-AAKVQLVF 343 (343)
T ss_pred CCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCC-ceEEEEeC
Confidence 77888888999999999998777899999999999999999999999999999999999988753 67888753
No 10
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=99.95 E-value=1e-27 Score=229.79 Aligned_cols=243 Identities=30% Similarity=0.554 Sum_probs=197.5
Q ss_pred CCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhh
Q psy1413 65 LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKA 144 (408)
Q Consensus 65 ~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~ 144 (408)
...++..+..+.+ +..++| +.+.++++.+.++++++.++.++-.|..+......+..+|+|+.|+|..++ .+.++.
T Consensus 6 ~~~~~~~~~~~~~-~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v~--v~~~~v 81 (343)
T PRK09880 6 QSCVVAGKKDVAV-TEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHSD--SSGLKE 81 (343)
T ss_pred eEEEEecCCceEE-EecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEec--CccCCC
Confidence 3456677888888 666667 467888999999999999987653233333334567789999999999982 233444
Q ss_pred ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
T Consensus 82 -------------------------------------------------------------------------------- 81 (343)
T PRK09880 82 -------------------------------------------------------------------------------- 81 (343)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEEcCceeecCCCcccccccccCCccccccceeecccC----CCCccceeEEeeccceeeeCCCCCCcccccccc
Q psy1413 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATP----PDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE 300 (408)
Q Consensus 225 ~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~ 300 (408)
+|+|...+..+|++|.+|..+.++.|++...+|.. ..+|+|++|+.++++.++++|++++++++++..
T Consensus 82 --------GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~ 153 (343)
T PRK09880 82 --------GQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMAFAE 153 (343)
T ss_pred --------CCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEECCCCCCHHHHHhhc
Confidence 99999999999999999999999999987776642 247999999999999999999999988877777
Q ss_pred hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHH
Q psy1413 301 PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTH 380 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~ 380 (408)
+++++++++.+....++++++|+|+|++|++++|+++.+|+++|++++++++|++.++++|++.++++++ +++.+.
T Consensus 154 ~~~~a~~al~~~~~~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~~lGa~~vi~~~~----~~~~~~ 229 (343)
T PRK09880 154 PLAVAIHAAHQAGDLQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAREMGADKLVNPQN----DDLDHY 229 (343)
T ss_pred HHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHHHcCCcEEecCCc----ccHHHH
Confidence 8889999997777778999999988999999999999999988999999999999999999999999866 344332
Q ss_pred HHHHhcCCCCceEEEcccchhhhhhc
Q psy1413 381 IIELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 381 ~~~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
.+ . ..++|++|||+|++.+++.+
T Consensus 230 ~~-~--~g~~D~vid~~G~~~~~~~~ 252 (343)
T PRK09880 230 KA-E--KGYFDVSFEVSGHPSSINTC 252 (343)
T ss_pred hc-c--CCCCCEEEECCCCHHHHHHH
Confidence 22 1 23699999999987666544
No 11
>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]
Probab=99.95 E-value=1.6e-27 Score=227.76 Aligned_cols=233 Identities=38% Similarity=0.643 Sum_probs=188.8
Q ss_pred ccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccc-cccCcceeEEEccCchHHHHhhccCCcEEEEEccC
Q psy1413 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPM-IVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAG 157 (408)
Q Consensus 79 ~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~-~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~ 157 (408)
+..+.|.+.+..+++.+..+++||+++.++..+.. ...... .+|+|+.|+|+.+| ....++.
T Consensus 16 ~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~---~~~~~~~i~GHE~~G~V~evG-~~~~~~~------------- 78 (350)
T COG1063 16 EEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEP---FVPPGDIILGHEFVGEVVEVG-VVRGFKV------------- 78 (350)
T ss_pred ccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCC---CCCCCCcccCccceEEEEEec-cccCCCC-------------
Confidence 44444556667789999999999999988753321 112222 78999999999999 4344555
Q ss_pred CCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCcee
Q psy1413 158 SQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVA 237 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~ 237 (408)
+|+|+
T Consensus 79 ---------------------------------------------------------------------------GdrVv 83 (350)
T COG1063 79 ---------------------------------------------------------------------------GDRVV 83 (350)
T ss_pred ---------------------------------------------------------------------------CCEEE
Confidence 99999
Q ss_pred ecCCCcccccccccCCccccccceeecccCC----CCccceeEEeeccceeeeC-CCCCCcccccccchhhhhhhhh-hc
Q psy1413 238 IEPGVPCRTCTYCKEGRYNLCRQIFFCATPP----DHGNLSRYYRHAADFCHKL-PDHVSLEEGALLEPLSVGVHAC-RR 311 (408)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~g~~~~~~~~~~~~~~~~-p~~~~~~~aa~~~~~~~~~~~~-~~ 311 (408)
+.|..+|+.|.+|++|.+++|++..++|+.. .+|+|+||+.++.+..+.+ |++++.+++++.+++++++++. ..
T Consensus 84 v~~~~~Cg~C~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~~~~~aal~epla~~~~~~a~~ 163 (350)
T COG1063 84 VEPNIPCGHCRYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGIDEEAAALTEPLATAYHGHAER 163 (350)
T ss_pred ECCCcCCCCChhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCCCChhhhhhcChhhhhhhhhhhc
Confidence 9999999999999999999999766665432 6899999999998666555 7776878888889999997763 33
Q ss_pred cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413 312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQP 390 (408)
Q Consensus 312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
....++++++|+|+|++|++++++++.+|+.+|++++++++|++.+++ .|++.+++... ++....+.+++.+.++
T Consensus 164 ~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~----~~~~~~~~~~t~g~g~ 239 (350)
T COG1063 164 AAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSE----DDAGAEILELTGGRGA 239 (350)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCcc----ccHHHHHHHHhCCCCC
Confidence 444555599999999999999999999999999999999999999988 66777776655 4788888899988899
Q ss_pred ceEEEcccchhhhhhcC
Q psy1413 391 DKTIDCSGIESTIKLGM 407 (408)
Q Consensus 391 d~i~d~~g~~~~~~~~~ 407 (408)
|++|||+|...++++++
T Consensus 240 D~vie~~G~~~~~~~ai 256 (350)
T COG1063 240 DVVIEAVGSPPALDQAL 256 (350)
T ss_pred CEEEECCCCHHHHHHHH
Confidence 99999999888777764
No 12
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.95 E-value=1.4e-28 Score=232.13 Aligned_cols=225 Identities=18% Similarity=0.245 Sum_probs=170.4
Q ss_pred CCeeeec-ccchhhhhcCCCCCCC-CCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------------Ccccc
Q psy1413 1 MHCVGIC-GSDVHYLTHGQIGDFR-LSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------EFRNV 63 (408)
Q Consensus 1 V~a~gic-~sDl~~~~~g~~~~~~-~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------~~~~~ 63 (408)
|+++||| ++|++.+ .|..+..+ ..+|.++|||++|+|+++|+++ +|++||||++.. ++...
T Consensus 32 v~~~gi~~~~D~~~~-~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v 109 (308)
T TIGR01202 32 IWYSGISTGTEKLFW-NGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVT 109 (308)
T ss_pred EEEEeeccCchhHHh-cCCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEc
Confidence 4689995 8999977 44332222 3679999999999999999998 699999998632 22233
Q ss_pred cCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC-----------------
Q psy1413 64 CLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH----------------- 126 (408)
Q Consensus 64 ~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~----------------- 126 (408)
+.+.++..|+.++. +.+.++ +..+++.+... ....+++++|+|+|++|++++|+++.+|+
T Consensus 110 ~~~~~~~ip~~~~~-~~a~~~-~~~~a~~~~~~-~~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~ 186 (308)
T TIGR01202 110 PASRVCRLDPALGP-QGALLA-LAATARHAVAG-AEVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT 186 (308)
T ss_pred CHHHceeCCCCCCH-HHHhhh-HHHHHHHHHHh-cccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh
Confidence 34444555665554 332222 22233221111 12357889999999999999999988775
Q ss_pred -------------cceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHH
Q psy1413 127 -------------EASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIAL 189 (408)
Q Consensus 127 -------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~ 189 (408)
.++.+++++|.. .+++++++++|+++.+|.+..+.++++..++.|++++.++.... +++++++
T Consensus 187 ~~~~i~~~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 266 (308)
T TIGR01202 187 GYEVLDPEKDPRRDYRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVR 266 (308)
T ss_pred hccccChhhccCCCCCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHH
Confidence 135678888864 26799999999999999887777788788889999999988765 7899999
Q ss_pred HHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 190 AMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 190 ~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
+++++|+++++++++++|||+|+++||+.+.+++ ..+|+++
T Consensus 267 ~l~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~-~~~Kv~~ 307 (308)
T TIGR01202 267 ELIESGALSLDGLITHQRPASDAAEAYMTAFSDP-DCLKMIL 307 (308)
T ss_pred HHHHcCCCChhhccceeecHHHHHHHHHHHhcCc-CceEEEe
Confidence 9999999999999999999999999999988764 4678776
No 13
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.95 E-value=2.2e-27 Score=229.85 Aligned_cols=220 Identities=24% Similarity=0.348 Sum_probs=161.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------ 62 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------ 62 (408)
|+++|||++|++.+. |. .+..+|.++|||++|+|+++|++|+++++||||++.+...+
T Consensus 40 v~~~gi~~~D~~~~~-g~---~~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~ 115 (371)
T cd08281 40 IAAAGLCHSDLSVIN-GD---RPRPLPMALGHEAAGVVVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGA 115 (371)
T ss_pred EEEEeeCccchHhhc-CC---CCCCCCccCCccceeEEEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCcc
Confidence 468999999999884 32 33467999999999999999999999999999986432111
Q ss_pred ------------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeE
Q psy1413 63 ------------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDV 105 (408)
Q Consensus 63 ------------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~v 105 (408)
.+...++..|+++++++++.++....+++.+......+ .+++|
T Consensus 116 ~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~V 195 (371)
T cd08281 116 AANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSV 195 (371)
T ss_pred ccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEE
Confidence 11122233344444433333322222222111111222 47899
Q ss_pred EEEccCccccccccccccccC------------------------------------------cceeEEEccCchH---H
Q psy1413 106 HYLTHGQIGDFRLSDPMIVGH------------------------------------------EASGIVSKVGAKV---K 140 (408)
Q Consensus 106 lv~g~G~vG~~~i~~a~~~G~------------------------------------------~~~~vv~~~g~~~---~ 140 (408)
+|.|+|++|++++|+++.+|+ .++.+++++|... .
T Consensus 196 lV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~ 275 (371)
T cd08281 196 AVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALET 275 (371)
T ss_pred EEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHH
Confidence 999999999999998887765 1355667776432 5
Q ss_pred HHhhccCCcEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccchHHH
Q psy1413 141 HLKATRPGGCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLH 214 (408)
Q Consensus 141 ~~~~l~~gG~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~ 214 (408)
++++++++|+++.+|.... ..+++...+++|++++.|++.. +++++++++++++|+++++++++++|+|+|+++
T Consensus 276 ~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~ 355 (371)
T cd08281 276 AYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYMGSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINE 355 (371)
T ss_pred HHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEecCCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHH
Confidence 7899999999999997643 4567778899999999998865 367899999999999999999999999999999
Q ss_pred HHHHHHcCCC
Q psy1413 215 AFETAKTGAG 224 (408)
Q Consensus 215 a~~~~~~~~~ 224 (408)
||+.+.+++.
T Consensus 356 A~~~~~~~~~ 365 (371)
T cd08281 356 GFDRLAAGEA 365 (371)
T ss_pred HHHHHhCCCc
Confidence 9999998754
No 14
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.94 E-value=2.9e-26 Score=219.51 Aligned_cols=241 Identities=35% Similarity=0.577 Sum_probs=198.5
Q ss_pred eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCC
Q psy1413 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPG 148 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~g 148 (408)
+..++.+.+ +..++|.+.+.++++.+.++++++.++.+...+... ....+...|.|+.|+|..+|+..+.++.
T Consensus 6 ~~~~~~l~~-~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~---- 78 (339)
T cd08239 6 FPGDRTVEL-REFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRV---- 78 (339)
T ss_pred EecCCceEE-EecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCC----
Confidence 445666777 667888888889999999999998887664222111 1123467899999999999975443443
Q ss_pred cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceE
Q psy1413 149 GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIK 228 (408)
Q Consensus 149 G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~k 228 (408)
T Consensus 79 -------------------------------------------------------------------------------- 78 (339)
T cd08239 79 -------------------------------------------------------------------------------- 78 (339)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCceeecCCCcccccccccCCccccccceee-cccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhh
Q psy1413 229 VMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFF-CATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGV 306 (408)
Q Consensus 229 vvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~ 306 (408)
+|+|...+..+|+.|..|..|++++|.+... +|. ..+|+|++|+.++++.++++|++++.++++.++ +..+++
T Consensus 79 ----Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~-~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~ 153 (339)
T cd08239 79 ----GDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGW-NRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAY 153 (339)
T ss_pred ----CCEEEECCCCCCCCChhhhCcCcccCcCccccccc-CCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHH
Confidence 8999999999999999999999999987654 343 357999999999999999999999998888876 677899
Q ss_pred hhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413 307 HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ 386 (408)
Q Consensus 307 ~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~ 386 (408)
+++....+++++++||+|+|++|+.++|+++.+|+++|++++++++|++.++++|++.++++++ ++ .+.+.+++.
T Consensus 154 ~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~~~ga~~~i~~~~----~~-~~~~~~~~~ 228 (339)
T cd08239 154 HALRRVGVSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELAKALGADFVINSGQ----DD-VQEIRELTS 228 (339)
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEcCCc----ch-HHHHHHHhC
Confidence 9988788899999999988999999999999999998888999999999999999999999876 44 666777777
Q ss_pred CCCCceEEEcccchhhhhhc
Q psy1413 387 GEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 387 ~~~~d~i~d~~g~~~~~~~~ 406 (408)
++++|++|||+|+...+..+
T Consensus 229 ~~~~d~vid~~g~~~~~~~~ 248 (339)
T cd08239 229 GAGADVAIECSGNTAARRLA 248 (339)
T ss_pred CCCCCEEEECCCCHHHHHHH
Confidence 77999999999988765543
No 15
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.94 E-value=6.8e-27 Score=225.26 Aligned_cols=226 Identities=19% Similarity=0.195 Sum_probs=164.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
|+++|||++|++.+. |.++ ...+|.++|||++|+|+++|++|++|++||||++.+..
T Consensus 44 v~~~gic~sD~~~~~-g~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~ 120 (360)
T PLN02586 44 ILYCGVCHSDLHTIK-NEWG--FTRYPIVPGHEIVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKM 120 (360)
T ss_pred EEEecCChhhHhhhc-CCcC--CCCCCccCCcceeEEEEEECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCc
Confidence 468999999999884 4322 23579999999999999999999999999999753211
Q ss_pred ---------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccc
Q psy1413 61 ---------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRL 118 (408)
Q Consensus 61 ---------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i 118 (408)
...+...++..|+++++++.++++....+++.+...... ..+++|+|.|+|++|++++
T Consensus 121 ~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~av 200 (360)
T PLN02586 121 IFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAV 200 (360)
T ss_pred cccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHHHhcccCCCCEEEEECCCHHHHHHH
Confidence 111122333445555553344333333332211111111 2578999999999999999
Q ss_pred cccccccCc--------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEccC
Q psy1413 119 SDPMIVGHE--------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAG 157 (408)
Q Consensus 119 ~~a~~~G~~--------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~ 157 (408)
|+++.+|+. ++.+++++|... +++++++++|+++.+|..
T Consensus 201 q~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~ 280 (360)
T PLN02586 201 KIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLP 280 (360)
T ss_pred HHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCC
Confidence 888776641 245566666432 589999999999999987
Q ss_pred CCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 158 SQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
..+.++++..++.++..+.+++..+ .+++++++++++|++++. + ++|+|+|+++||+.+.+++. .+|++++.
T Consensus 281 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~--~-~~~~l~~~~~A~~~~~~~~~-~gkvvi~~ 353 (360)
T PLN02586 281 EKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITAD--I-ELIRMDEINTAMERLAKSDV-RYRFVIDV 353 (360)
T ss_pred CCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCc--E-EEEeHHHHHHHHHHHHcCCC-cEEEEEEc
Confidence 6667788888889999999988766 789999999999999753 4 68999999999999998854 47888775
No 16
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.94 E-value=2.4e-27 Score=226.86 Aligned_cols=228 Identities=18% Similarity=0.210 Sum_probs=163.3
Q ss_pred CCeeeecccchhhhhcCCCCCC--CCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-----------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDF--RLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR----------------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~--~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~----------------- 61 (408)
|+++|||+||++.+. |..+.. ...+|.++|||++|+|+++|.+ +|++||||++.+...
T Consensus 32 v~a~gIc~sD~~~~~-G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~ 108 (341)
T cd08237 32 PTYLSICHADQRYYQ-GNRSPEALKKKLPMALIHEGIGVVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRF 108 (341)
T ss_pred EEEEEEcCccHHHHc-CCCCcccccCCCCeeccceeEEEEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcce
Confidence 579999999999984 432211 2357999999999999998764 799999998765321
Q ss_pred -------------cccCCcceeccceeeecccccCCCCCCcceEEEE--eeee-ecCCeEEEEccCcccccccccccc-c
Q psy1413 62 -------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEM--HCVG-ICGSDVHYLTHGQIGDFRLSDPMI-V 124 (408)
Q Consensus 62 -------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~--~~~~-~~g~~vlv~g~G~vG~~~i~~a~~-~ 124 (408)
..+.+.++..|+++++ +.+.++++..+++.+.. .... ..+++|+|.|+|++|++++|+++. +
T Consensus 109 ~g~~~~G~~aey~~v~~~~~~~vP~~l~~-~~aa~~~~~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~ 187 (341)
T cd08237 109 RSSGYDGFMQDYVFLPPDRLVKLPDNVDP-EVAAFTELVSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIY 187 (341)
T ss_pred eEecCCCceEEEEEEchHHeEECCCCCCh-HHhhhhchHHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhc
Confidence 1222233444555555 23333333333321110 0111 247899999999999999888764 4
Q ss_pred cC--------------------------------cceeEEEccCch------HHHHhhccCCcEEEEEccCCCCcccCHH
Q psy1413 125 GH--------------------------------EASGIVSKVGAK------VKHLKATRPGGCLVIVGAGSQDVKIPLV 166 (408)
Q Consensus 125 G~--------------------------------~~~~vv~~~g~~------~~~~~~l~~gG~iv~~G~~~~~~~~~~~ 166 (408)
|. .++.+++++|.. .+++++++++|+++.+|.+..+.+++..
T Consensus 188 g~~~vi~~~~~~~k~~~a~~~~~~~~~~~~~~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~ 267 (341)
T cd08237 188 PESKLVVFGKHQEKLDLFSFADETYLIDDIPEDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTR 267 (341)
T ss_pred CCCcEEEEeCcHhHHHHHhhcCceeehhhhhhccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHH
Confidence 42 257788999841 3689999999999999987667778888
Q ss_pred HHHhcCcEEEEeecCC-CcHHHHHHHHHcC---CCCCCCceeeeeccc---hHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 167 LTMTKEIDIRGVFRYA-NDYPIALAMVASG---KVDVKKLITHNYLLE---DTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 167 ~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g---~~~~~~~i~~~~~l~---~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
.++.|++++.|++..+ +++++++++++++ +.+++++|+|+|+|+ |+.++|+.+.++ ..+|++++++
T Consensus 268 ~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~--~~gKvvi~~~ 340 (341)
T cd08237 268 MVLEKGLTLVGSSRSTREDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN--SWGKTVMEWE 340 (341)
T ss_pred HHhhCceEEEEecccCHHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc--CcceEEEEee
Confidence 8999999999998765 7899999999999 446889999999985 566666655543 4678888753
No 17
>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like. MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at
Probab=99.94 E-value=7.5e-27 Score=223.57 Aligned_cols=228 Identities=25% Similarity=0.322 Sum_probs=168.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR------------------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~------------------- 61 (408)
|.++|||++|++.+..++.. +..+|.++|||++|+|+++|++|+++++||||+..+...
T Consensus 31 v~~~gi~~~D~~~~~~~~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~ 108 (339)
T cd08239 31 VKASGLCGSDLHYYYHGHRA--PAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKR 108 (339)
T ss_pred EEEEEeccccHHHHcCCCCc--cCCCCceeccCceEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcc
Confidence 46899999999988543211 224589999999999999999999999999998765322
Q ss_pred ---------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC
Q psy1413 62 ---------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH 126 (408)
Q Consensus 62 ---------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~ 126 (408)
..+...++..|+++++++.+.++.+..+++.+.....-..+++++|+|+|++|++++|+++.+|+
T Consensus 109 ~~~g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~vlV~G~G~vG~~~~~~ak~~G~ 188 (339)
T cd08239 109 AAYGWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAYHALRRVGVSGRDTVLVVGAGPVGLGALMLARALGA 188 (339)
T ss_pred cccccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 12222334445555554444444444444322111111248899999999999999988887665
Q ss_pred c------------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEccCCCCc
Q psy1413 127 E------------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQDV 161 (408)
Q Consensus 127 ~------------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~~~ 161 (408)
. ++.+++++|... +++++++++|+++.+|.....
T Consensus 189 ~~vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~- 267 (339)
T cd08239 189 EDVIGVDPSPERLELAKALGADFVINSGQDDVQEIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGEL- 267 (339)
T ss_pred CEEEEECCCHHHHHHHHHhCCCEEEcCCcchHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCc-
Confidence 2 334555555432 578999999999999976543
Q ss_pred ccCH-HHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 162 KIPL-VLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 162 ~~~~-~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+++. ..++++++++.|++..+ +++++++++++++++++.++++++|+|+|+++||+.+.+++ .+|+++++
T Consensus 268 ~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~--~gKvvi~~ 339 (339)
T cd08239 268 TIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE--SGKVVFVF 339 (339)
T ss_pred ccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC--ceEEEEeC
Confidence 3443 46788999999999876 78999999999999999999999999999999999998764 57888764
No 18
>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd
Probab=99.94 E-value=6.9e-26 Score=219.44 Aligned_cols=238 Identities=33% Similarity=0.472 Sum_probs=194.7
Q ss_pred cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413 72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL 151 (408)
Q Consensus 72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i 151 (408)
++.+.. +..++|.+.+.++++.+.++++++.++.+.- |.. ....+..+|.|+.|+|..+|+....++.
T Consensus 18 ~~~l~~-~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~-g~~---~~~~p~i~GhE~~G~V~~vG~~v~~~~~------- 85 (371)
T cd08281 18 SRPLVI-EEVELDPPGPGEVLVKIAAAGLCHSDLSVIN-GDR---PRPLPMALGHEAAGVVVEVGEGVTDLEV------- 85 (371)
T ss_pred CCCceE-EEeecCCCCCCeEEEEEEEEeeCccchHhhc-CCC---CCCCCccCCccceeEEEEeCCCCCcCCC-------
Confidence 456666 6677888888899999999999998887652 211 1234567899999999999975443443
Q ss_pred EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
T Consensus 86 -------------------------------------------------------------------------------- 85 (371)
T cd08281 86 -------------------------------------------------------------------------------- 85 (371)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCceeecCCCcccccccccCCccccccceeec---ccC-----------------CCCccceeEEeeccceeeeCCCCC
Q psy1413 232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---ATP-----------------PDHGNLSRYYRHAADFCHKLPDHV 291 (408)
Q Consensus 232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~ 291 (408)
+|+|+..+..+|+.|..|++|+++.|+..... |.. ...|+|++|+.++++.++++|+++
T Consensus 86 -GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~~lP~~l 164 (371)
T cd08281 86 -GDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDV 164 (371)
T ss_pred -CCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceEECCCCC
Confidence 89998878789999999999999999875332 100 013799999999999999999999
Q ss_pred Ccccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecC
Q psy1413 292 SLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLID 369 (408)
Q Consensus 292 ~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~ 369 (408)
+++++++++ ...++++++ ....+++++++||.|+|++|++++|+++.+|+++|++++++++|++.++++|++++++++
T Consensus 165 ~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~ 244 (371)
T cd08281 165 PLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARELGATATVNAG 244 (371)
T ss_pred ChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHcCCceEeCCC
Confidence 999988887 567788776 567889999999998899999999999999997799999999999999999999999987
Q ss_pred CCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413 370 RNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407 (408)
Q Consensus 370 ~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~ 407 (408)
+ ++..+.+++++.+ ++|++|||+|...++..++
T Consensus 245 ~----~~~~~~i~~~~~~-g~d~vid~~G~~~~~~~~~ 277 (371)
T cd08281 245 D----PNAVEQVRELTGG-GVDYAFEMAGSVPALETAY 277 (371)
T ss_pred c----hhHHHHHHHHhCC-CCCEEEECCCChHHHHHHH
Confidence 6 6777888888866 8999999999877666543
No 19
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.94 E-value=1.7e-26 Score=222.62 Aligned_cols=226 Identities=19% Similarity=0.329 Sum_probs=162.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccC---------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCL--------------- 65 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~--------------- 65 (408)
|.++|||++|++.+. |. .+..+|.++|||++|+|+++|++|++|++||||.+.+...|..+
T Consensus 33 v~~~gi~~~D~~~~~-g~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~ 108 (358)
T TIGR03451 33 IQACGVCHTDLHYRE-GG---INDEFPFLLGHEAAGVVEAVGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTH 108 (358)
T ss_pred EEEEeecHHHHHHhc-CC---ccccCCcccccceEEEEEEeCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCcc
Confidence 468999999999884 32 23357999999999999999999999999999987543222111
Q ss_pred -------------------------------CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcc
Q psy1413 66 -------------------------------SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQI 113 (408)
Q Consensus 66 -------------------------------~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~v 113 (408)
..++..|+.+++++.+.++....+++........+ .+++++|+|+|++
T Consensus 109 ~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~v 188 (358)
T TIGR03451 109 NATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGV 188 (358)
T ss_pred ccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHH
Confidence 12222333333322222222222222111111112 4789999999999
Q ss_pred ccccccccccccC-------------------------------------------cceeEEEccCchH---HHHhhccC
Q psy1413 114 GDFRLSDPMIVGH-------------------------------------------EASGIVSKVGAKV---KHLKATRP 147 (408)
Q Consensus 114 G~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~~---~~~~~l~~ 147 (408)
|++++|+++.+|+ .++.+++++|... ++++++++
T Consensus 189 G~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~ 268 (358)
T TIGR03451 189 GDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDL 268 (358)
T ss_pred HHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhcc
Confidence 9999988887764 2455677777532 67899999
Q ss_pred CcEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHc
Q psy1413 148 GGCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKT 221 (408)
Q Consensus 148 gG~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~ 221 (408)
+|+++.+|.+.. +.+++...++++++++.+++.. ..+++++++++++|+++++++++++|||+|+.+||+.+++
T Consensus 269 ~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~ 348 (358)
T TIGR03451 269 AGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHA 348 (358)
T ss_pred CCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhC
Confidence 999999998754 3567777888999999998743 2678999999999999999999999999999999999988
Q ss_pred CCCCceEEEEE
Q psy1413 222 GAGNAIKVMIH 232 (408)
Q Consensus 222 ~~~~~~kvvi~ 232 (408)
++. .|+++.
T Consensus 349 ~~~--~k~~~~ 357 (358)
T TIGR03451 349 GDV--LRSVVE 357 (358)
T ss_pred CCc--ceeEEe
Confidence 753 465543
No 20
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.94 E-value=8.1e-27 Score=226.60 Aligned_cols=227 Identities=20% Similarity=0.244 Sum_probs=156.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCccee----------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILR---------- 70 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~---------- 70 (408)
|+++|||+||++.+. |. .+..+|+++|||++|+|+++|++|++|++||||++.+...|..|..|..
T Consensus 40 v~a~gIcgsD~~~~~-g~---~~~~~p~i~GhE~~G~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~ 115 (393)
T TIGR02819 40 VVTTNICGSDQHMVR-GR---TTAPTGLVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVN 115 (393)
T ss_pred EEEeeecHHHHHHHC-CC---CCCCCCccccceeEEEEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCC
Confidence 579999999999884 43 2346799999999999999999999999999998765432211111100
Q ss_pred -----------------c--cceeeecc----cccCCCCCCc-------ceEEEEee--------eee-cCCeEEEEccC
Q psy1413 71 -----------------R--RFSLRFRE----QKPIEDPDDH-------EVLLEMHC--------VGI-CGSDVHYLTHG 111 (408)
Q Consensus 71 -----------------~--p~~~~~~~----~~~lp~~~~~-------~~~~~~~~--------~~~-~g~~vlv~g~G 111 (408)
+ .+++..++ ..++|..... +.+..... ..+ .+++++|.|+|
T Consensus 116 ~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G 195 (393)
T TIGR02819 116 PARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPDRDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAG 195 (393)
T ss_pred CCCccceecccccCCCCCceEEEEEechhhCceEECCCcccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence 0 22233321 1233332111 11111110 111 47889999999
Q ss_pred ccccccccccccccC-------------------------------------------cceeEEEccCch----------
Q psy1413 112 QIGDFRLSDPMIVGH-------------------------------------------EASGIVSKVGAK---------- 138 (408)
Q Consensus 112 ~vG~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~---------- 138 (408)
++|++++++++.+|+ .++.+++++|..
T Consensus 196 ~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~v~~~~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~ 275 (393)
T TIGR02819 196 PVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCETVDLSKDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKK 275 (393)
T ss_pred HHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeEEecCCcccHHHHHHHHcCCCCCcEEEECCCCccccccccccc
Confidence 999998888776554 245667777753
Q ss_pred -------HHHHhhccCCcEEEEEccCC-C-C-----------cccCHHHHHhcCcEEEEeecCCC-cHHHHHHHHHcCCC
Q psy1413 139 -------VKHLKATRPGGCLVIVGAGS-Q-D-----------VKIPLVLTMTKEIDIRGVFRYAN-DYPIALAMVASGKV 197 (408)
Q Consensus 139 -------~~~~~~l~~gG~iv~~G~~~-~-~-----------~~~~~~~~~~~~~~l~g~~~~~~-~~~~~~~l~~~g~~ 197 (408)
.+++++++++|+++.+|.+. . + +++....++.+++++.+...... .+.++++++++|++
T Consensus 276 ~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i 355 (393)
T TIGR02819 276 EAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRV 355 (393)
T ss_pred cchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccccccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCC
Confidence 25799999999999999863 2 2 12334456678888887544433 34789999999999
Q ss_pred CCCCcee-eeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 198 DVKKLIT-HNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 198 ~~~~~i~-~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+++++++ |+|||+|+++||+.+.++ ..+|+++++
T Consensus 356 ~~~~~i~~~~~~l~~~~~a~~~~~~~--~~~Kvvi~~ 390 (393)
T TIGR02819 356 QIAKAVNVTVISLDDAPEGYAEFDAG--AAKKFVIDP 390 (393)
T ss_pred CHHHceecceecHHHHHHHHHHHhhC--CceEEEEeC
Confidence 9988888 789999999999999876 458998875
No 21
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.94 E-value=1.8e-26 Score=223.03 Aligned_cols=229 Identities=18% Similarity=0.189 Sum_probs=166.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
|+++|||++|++.+. |.++ ...+|.++|||++|+|+++|++|++|++||||++.+..
T Consensus 38 V~a~gic~sD~~~~~-G~~~--~~~~p~i~GhE~aG~Vv~vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~ 114 (375)
T PLN02178 38 ILFCGVCHSDLHTIK-NHWG--FSRYPIIPGHEIVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKV 114 (375)
T ss_pred EEEEcCchHHHHHhc-CCCC--CCCCCcccCceeeEEEEEECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCc
Confidence 468999999999884 4321 13568999999999999999999999999999854311
Q ss_pred ---------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEee-ee-ecCCeEEEEccCcccccc
Q psy1413 61 ---------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHC-VG-ICGSDVHYLTHGQIGDFR 117 (408)
Q Consensus 61 ---------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~-~~-~~g~~vlv~g~G~vG~~~ 117 (408)
...+.+.++..|+++++++.++++....+++.+.... .. ..+++++|.|+|++|+++
T Consensus 115 ~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~G~vG~~a 194 (375)
T PLN02178 115 VFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLGGLGHIA 194 (375)
T ss_pred cccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHHHHHHHHhCCCCCCCCEEEEEcccHHHHHH
Confidence 1111223334455555433333333332222111000 11 247889999999999999
Q ss_pred ccccccccCc--------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEcc
Q psy1413 118 LSDPMIVGHE--------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGA 156 (408)
Q Consensus 118 i~~a~~~G~~--------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~ 156 (408)
+|+|+.+|+. ++.+++++|.. .+++++++++|+++.+|.
T Consensus 195 vq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~ 274 (375)
T PLN02178 195 VKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIIDTVSAEHALLPLFSLLKVSGKLVALGL 274 (375)
T ss_pred HHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCCcEEEECCCcHHHHHHHHHhhcCCCEEEEEcc
Confidence 9988877651 24555666643 267899999999999998
Q ss_pred CCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCc
Q psy1413 157 GSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDR 235 (408)
Q Consensus 157 ~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~ 235 (408)
+..+.+++...++++++++.|++..+ ++++++++++++|++++. + ++|||+|+++||+.+.+++. .+|+++..+.
T Consensus 275 ~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~--i-~~~~l~~~~~A~~~~~~~~~-~gkvvi~~~~ 350 (375)
T PLN02178 275 PEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSD--I-ELIKMSDINSAMDRLAKSDV-RYRFVIDVAN 350 (375)
T ss_pred CCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCccc--E-EEEeHHHHHHHHHHHHcCCC-ceEEEEEecc
Confidence 77677788888999999999998876 789999999999999754 4 67999999999999998754 4688887644
Q ss_pred e
Q psy1413 236 V 236 (408)
Q Consensus 236 v 236 (408)
.
T Consensus 351 ~ 351 (375)
T PLN02178 351 S 351 (375)
T ss_pred c
Confidence 3
No 22
>PLN02740 Alcohol dehydrogenase-like
Probab=99.93 E-value=1.2e-25 Score=218.42 Aligned_cols=245 Identities=30% Similarity=0.430 Sum_probs=195.7
Q ss_pred eeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 69 LRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 69 ~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
+..+. .+.+ +..++|.+.+.++++.+.++++++.++.+.- |... ....++..+|.|+.|+|..+|...+.++.
T Consensus 16 ~~~~~~~~~~-~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~-g~~~-~~~~~p~i~GhE~~G~V~~vG~~v~~~~v--- 89 (381)
T PLN02740 16 AWGPGEPLVM-EEIRVDPPQKMEVRIKILYTSICHTDLSAWK-GENE-AQRAYPRILGHEAAGIVESVGEGVEDLKA--- 89 (381)
T ss_pred EecCCCCcEE-EEeeCCCCCCCeEEEEEEEEecChhhHHHhC-CCCc-ccCCCCccccccceEEEEEeCCCCCcCCC---
Confidence 34443 3555 5577788888899999999999998876642 1111 11234667899999999999975433443
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 90 -------------------------------------------------------------------------------- 89 (381)
T PLN02740 90 -------------------------------------------------------------------------------- 89 (381)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeeccc-----------------------CCCCccceeEEeecccee
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT-----------------------PPDHGNLSRYYRHAADFC 284 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------------~~~~g~~~~~~~~~~~~~ 284 (408)
+|+|+..+..+|+.|.+|..++++.|++....+. ...+|+|++|+.++++.+
T Consensus 90 -----GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~ 164 (381)
T PLN02740 90 -----GDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACV 164 (381)
T ss_pred -----CCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHe
Confidence 9999999989999999999999999998653211 012699999999999999
Q ss_pred eeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCC
Q psy1413 285 HKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGA 362 (408)
Q Consensus 285 ~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga 362 (408)
+++|++++.+++++++ ...++++++ ....+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|+
T Consensus 165 ~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga 244 (381)
T PLN02740 165 VKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGI 244 (381)
T ss_pred EECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCC
Confidence 9999999998888777 456777765 56789999999999999999999999999999779999999999999999999
Q ss_pred CeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413 363 DATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407 (408)
Q Consensus 363 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~ 407 (408)
+.+++.++ ..+++.+.+++++.+ ++|++||++|+..+++.++
T Consensus 245 ~~~i~~~~--~~~~~~~~v~~~~~~-g~dvvid~~G~~~~~~~a~ 286 (381)
T PLN02740 245 TDFINPKD--SDKPVHERIREMTGG-GVDYSFECAGNVEVLREAF 286 (381)
T ss_pred cEEEeccc--ccchHHHHHHHHhCC-CCCEEEECCCChHHHHHHH
Confidence 99998764 113467778888866 8999999999887766653
No 23
>PLN02740 Alcohol dehydrogenase-like
Probab=99.93 E-value=4e-26 Score=221.72 Aligned_cols=228 Identities=21% Similarity=0.261 Sum_probs=157.5
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCC--------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLS-------------- 66 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~-------------- 66 (408)
|+++|||++|++.+. |... ....+|.++|||++|+|+++|++|++|++||||++.+...|..|.
T Consensus 42 v~~~gic~sD~~~~~-g~~~-~~~~~p~i~GhE~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~ 119 (381)
T PLN02740 42 ILYTSICHTDLSAWK-GENE-AQRAYPRILGHEAAGIVESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYR 119 (381)
T ss_pred EEEEecChhhHHHhC-CCCc-ccCCCCccccccceEEEEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCcc
Confidence 578999999999884 3221 223579999999999999999999999999999876532221111
Q ss_pred -------------------------------------------cceeccceeeecccccCCCCCCcceEEEEeeeee-cC
Q psy1413 67 -------------------------------------------PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CG 102 (408)
Q Consensus 67 -------------------------------------------~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g 102 (408)
.++..|+++++++.+.++....+++.+......+ .+
T Consensus 120 ~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g 199 (381)
T PLN02740 120 VDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVVKIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAG 199 (381)
T ss_pred ccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeEECCCCCCHHHhhhhcccchhhHHHHHhccCCCCC
Confidence 1122223332222222222222222111111112 47
Q ss_pred CeEEEEccCccccccccccccccCc--------------------------------------------ceeEEEccCch
Q psy1413 103 SDVHYLTHGQIGDFRLSDPMIVGHE--------------------------------------------ASGIVSKVGAK 138 (408)
Q Consensus 103 ~~vlv~g~G~vG~~~i~~a~~~G~~--------------------------------------------~~~vv~~~g~~ 138 (408)
++|+|+|+|++|++++|+++.+|+. ++.+++++|..
T Consensus 200 ~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~ 279 (381)
T PLN02740 200 SSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNV 279 (381)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCCh
Confidence 8999999999999999988877651 34455566643
Q ss_pred H---HHHhhccCC-cEEEEEccCCCCcccCHHHH-HhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeecc
Q psy1413 139 V---KHLKATRPG-GCLVIVGAGSQDVKIPLVLT-MTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLL 209 (408)
Q Consensus 139 ~---~~~~~l~~g-G~iv~~G~~~~~~~~~~~~~-~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l 209 (408)
. +++++++++ |+++.+|.+..+..+++... +++++++.|++... .+++++++++.+++++++++++++|+|
T Consensus 280 ~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l 359 (381)
T PLN02740 280 EVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGSVFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPF 359 (381)
T ss_pred HHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecH
Confidence 2 678999997 99999998765433333222 35789999887543 468999999999999999999999999
Q ss_pred chHHHHHHHHHcCCCCceEEEEE
Q psy1413 210 EDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 210 ~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+|+++||+.+.+++ ..|++++
T Consensus 360 ~e~~~A~~~~~~~~--~~k~~~~ 380 (381)
T PLN02740 360 EKINEAFQLLEDGK--ALRCLLH 380 (381)
T ss_pred HHHHHHHHHHHCCC--ceeEEEe
Confidence 99999999998874 3688775
No 24
>PLN02827 Alcohol dehydrogenase-like
Probab=99.93 E-value=5.5e-26 Score=220.28 Aligned_cols=225 Identities=20% Similarity=0.224 Sum_probs=160.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCC--------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLS-------------- 66 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~-------------- 66 (408)
|.++|||++|++.+. +. . .+|.++|||++|+|+++|++|++|++||||+..+...|..+.
T Consensus 44 v~~~gic~sD~~~~~-g~---~--~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~ 117 (378)
T PLN02827 44 VVSTSLCRSDLSAWE-SQ---A--LFPRIFGHEASGIVESIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLG 117 (378)
T ss_pred EEEEecChhHHHHhc-CC---C--CCCeeecccceEEEEEcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCcc
Confidence 468999999999874 31 1 468899999999999999999999999999976532222111
Q ss_pred ----------------------------------------cceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeE
Q psy1413 67 ----------------------------------------PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDV 105 (408)
Q Consensus 67 ----------------------------------------~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~v 105 (408)
.++..|+++++++.+.++....+++........ ..++++
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~V 197 (378)
T PLN02827 118 LERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSV 197 (378)
T ss_pred ccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEE
Confidence 122223333332222221111111100000111 248899
Q ss_pred EEEccCccccccccccccccCc--------------------------------------------ceeEEEccCch---
Q psy1413 106 HYLTHGQIGDFRLSDPMIVGHE--------------------------------------------ASGIVSKVGAK--- 138 (408)
Q Consensus 106 lv~g~G~vG~~~i~~a~~~G~~--------------------------------------------~~~vv~~~g~~--- 138 (408)
+|+|+|++|++++|+++.+|+. ++.+++++|..
T Consensus 198 lV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~ 277 (378)
T PLN02827 198 VIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIA 277 (378)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHH
Confidence 9999999999999888876641 24456666653
Q ss_pred HHHHhhccCC-cEEEEEccCCCCcccCH-HHHHhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeeccchH
Q psy1413 139 VKHLKATRPG-GCLVIVGAGSQDVKIPL-VLTMTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLLEDT 212 (408)
Q Consensus 139 ~~~~~~l~~g-G~iv~~G~~~~~~~~~~-~~~~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~ 212 (408)
.+++++++++ |+++.+|.+..+..++. ..++++++++.|++... .+++++++++++|+++++++++++|+|+|+
T Consensus 278 ~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~ 357 (378)
T PLN02827 278 TTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWKPKSDLPSLVDKYMNKEIMIDEFITHNLSFDEI 357 (378)
T ss_pred HHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCchhhhHHHHHHHHHcCCCChHHheEEEecHHHH
Confidence 2689999999 99999998765555544 36888999999987642 478999999999999998899999999999
Q ss_pred HHHHHHHHcCCCCceEEEEEc
Q psy1413 213 LHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 213 ~~a~~~~~~~~~~~~kvvi~~ 233 (408)
.+||+.+.+++. +|++|++
T Consensus 358 ~~A~~~~~~~~~--~k~vi~~ 376 (378)
T PLN02827 358 NKAFELMREGKC--LRCVIHM 376 (378)
T ss_pred HHHHHHHHCCCc--eEEEEEe
Confidence 999999998754 6888865
No 25
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.93 E-value=9.6e-26 Score=214.68 Aligned_cols=223 Identities=19% Similarity=0.199 Sum_probs=161.8
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
|+++|||++|++.+. |..+ ...+|.++|||++|+|+++|++|+++++||||++.+.
T Consensus 34 v~~~gi~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~ 110 (329)
T TIGR02822 34 VRACGVCRTDLHVSE-GDLP--VHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPAS 110 (329)
T ss_pred EEEEeecchhHHHHc-CCCC--CCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCc
Confidence 468999999999884 4322 1245799999999999999999999999999975431
Q ss_pred -------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413 60 -------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG 125 (408)
Q Consensus 60 -------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G 125 (408)
+...+...++..|+.+++++.++++....+++.+... ..+ .+++++|+|+|++|++++|+++.+|
T Consensus 111 ~~~g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~~g~~VlV~G~g~iG~~a~~~a~~~G 189 (329)
T TIGR02822 111 RYTGWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLPPGGRLGLYGFGGSAHLTAQVALAQG 189 (329)
T ss_pred ccCCcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCCCCCEEEEEcCCHHHHHHHHHHHHCC
Confidence 1122233444556666554444455444444422111 222 4789999999999999999988877
Q ss_pred Ccc--------------------------------eeEEEccCch---HHHHhhccCCcEEEEEccCC-CCcccCHHHHH
Q psy1413 126 HEA--------------------------------SGIVSKVGAK---VKHLKATRPGGCLVIVGAGS-QDVKIPLVLTM 169 (408)
Q Consensus 126 ~~~--------------------------------~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~ 169 (408)
+.. +.+++..+.. .+++++++++|+++.+|... ...+++...++
T Consensus 190 ~~vi~~~~~~~~~~~a~~~Ga~~vi~~~~~~~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~ 269 (329)
T TIGR02822 190 ATVHVMTRGAAARRLALALGAASAGGAYDTPPEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTDTPPLNYQRHL 269 (329)
T ss_pred CeEEEEeCChHHHHHHHHhCCceeccccccCcccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCccCCCCCHHHHh
Confidence 521 1122222222 16799999999999999853 33467777888
Q ss_pred hcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 170 TKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 170 ~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
++++++.+++... .++.++++++++++++ +++|+|+|+|+++||+.+.+++. .+|+++
T Consensus 270 ~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~---~i~~~~~l~~~~~A~~~~~~~~~-~Gkvvl 328 (329)
T TIGR02822 270 FYERQIRSVTSNTRADAREFLELAAQHGVR---VTTHTYPLSEADRALRDLKAGRF-DGAAVL 328 (329)
T ss_pred hCCcEEEEeecCCHHHHHHHHHHHHhCCCe---eEEEEEeHHHHHHHHHHHHcCCC-ceEEEe
Confidence 9999999998765 7889999999999985 47899999999999999998754 566665
No 26
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.93 E-value=3.9e-25 Score=213.83 Aligned_cols=238 Identities=30% Similarity=0.444 Sum_probs=192.3
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.+ +..+.|.+.+.++++.+.++++++.++.+.. |... ....+..+|.|+.|+|+.+|+..+.++.
T Consensus 13 ~l~~-~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~-g~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~~~--------- 79 (368)
T TIGR02818 13 PLKI-EEVDVEMPQKGEVLVRIVATGVCHTDAFTLS-GADP--EGVFPVILGHEGAGIVEAVGEGVTSVKV--------- 79 (368)
T ss_pred CeEE-EEecCCCCCCCeEEEEEEEecccHHHHHHhc-CCCC--CCCCCeeeccccEEEEEEECCCCccCCC---------
Confidence 4555 5567788888899999999999988876542 2111 1235678899999999999976444444
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 80 -------------------------------------------------------------------------------G 80 (368)
T TIGR02818 80 -------------------------------------------------------------------------------G 80 (368)
T ss_pred -------------------------------------------------------------------------------C
Confidence 9
Q ss_pred CceeecCCCcccccccccCCccccccceee---cccC-----------------CCCccceeEEeeccceeeeCCCCCCc
Q psy1413 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFF---CATP-----------------PDHGNLSRYYRHAADFCHKLPDHVSL 293 (408)
Q Consensus 234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~~~ 293 (408)
|+|...+..+|+.|..|..+.++.|.+... +|.. ..+|+|++|+.++++.++++|+++++
T Consensus 81 drV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~ 160 (368)
T TIGR02818 81 DHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPL 160 (368)
T ss_pred CEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCH
Confidence 999988888999999999999999986421 1110 01479999999999999999999999
Q ss_pred ccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCC
Q psy1413 294 EEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRN 371 (408)
Q Consensus 294 ~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~ 371 (408)
+++++++ +..++++++ +...+++++++||+|+|++|++++|+|+.+|+++|++++++++|++.++++|++.++++++
T Consensus 161 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~- 239 (368)
T TIGR02818 161 EEVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPND- 239 (368)
T ss_pred HHhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccc-
Confidence 9988887 667788887 5678899999999988999999999999999977999999999999999999999998763
Q ss_pred CChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413 372 HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
..+++.+.+++++.+ ++|++|||+|+..++..+
T Consensus 240 -~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~ 272 (368)
T TIGR02818 240 -YDKPIQEVIVEITDG-GVDYSFECIGNVNVMRAA 272 (368)
T ss_pred -cchhHHHHHHHHhCC-CCCEEEECCCCHHHHHHH
Confidence 124567778888865 899999999987666544
No 27
>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase. Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.
Probab=99.93 E-value=2.9e-25 Score=214.05 Aligned_cols=236 Identities=30% Similarity=0.460 Sum_probs=192.1
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV 154 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~ 154 (408)
+.+ ++.++|.+.+..+++.+..+++++.++.+.- |.. ...++..+|.++.|++..+|+....++.
T Consensus 14 ~~~-~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~-g~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~---------- 78 (358)
T TIGR03451 14 VEL-ETIVVPDPGPGEVIVDIQACGVCHTDLHYRE-GGI---NDEFPFLLGHEAAGVVEAVGEGVTDVAP---------- 78 (358)
T ss_pred CEE-EEEECCCCCCCeEEEEEEEEeecHHHHHHhc-CCc---cccCCcccccceEEEEEEeCCCCcccCC----------
Confidence 455 5677888888899999999999988776542 211 1234567899999999999975444444
Q ss_pred ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
+|
T Consensus 79 ------------------------------------------------------------------------------Gd 80 (358)
T TIGR03451 79 ------------------------------------------------------------------------------GD 80 (358)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 99
Q ss_pred ceeecCCCcccccccccCCccccccceeec--------ccC----CCCccceeEEeeccceeeeCCCCCCcccccccc-h
Q psy1413 235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFC--------ATP----PDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-P 301 (408)
Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~----~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~ 301 (408)
+|...+..+|+.|..|..+++++|.+.... |.. ..+|+|++|+.++++.++++|++++++++++++ .
T Consensus 81 rV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~ 160 (358)
T TIGR03451 81 YVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCG 160 (358)
T ss_pred EEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhccc
Confidence 999988899999999999999999753111 110 136999999999999999999999998888777 4
Q ss_pred hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHH
Q psy1413 302 LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTH 380 (408)
Q Consensus 302 ~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~ 380 (408)
..++++++ +...+++++++||+|+|++|+.++|+++.+|+++|++++++++|++.++++|++.++++++ ++..+.
T Consensus 161 ~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~~~Ga~~~i~~~~----~~~~~~ 236 (358)
T TIGR03451 161 VMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWAREFGATHTVNSSG----TDPVEA 236 (358)
T ss_pred chhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcCCC----cCHHHH
Confidence 55566665 5677899999999988999999999999999988999999999999999999999999876 667778
Q ss_pred HHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413 381 IIELLQGEQPDKTIDCSGIESTIKLGM 407 (408)
Q Consensus 381 ~~~~~~~~~~d~i~d~~g~~~~~~~~~ 407 (408)
++++++++++|++|||+|++.+++.++
T Consensus 237 i~~~~~~~g~d~vid~~g~~~~~~~~~ 263 (358)
T TIGR03451 237 IRALTGGFGADVVIDAVGRPETYKQAF 263 (358)
T ss_pred HHHHhCCCCCCEEEECCCCHHHHHHHH
Confidence 888888789999999999877766553
No 28
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.93 E-value=2.8e-25 Score=206.88 Aligned_cols=169 Identities=25% Similarity=0.343 Sum_probs=144.9
Q ss_pred cCceeecCCCcccccccccCCccccccceeecccC------CCCccceeEEeeccc-eeeeCCCCCCcccccccc-hhhh
Q psy1413 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATP------PDHGNLSRYYRHAAD-FCHKLPDHVSLEEGALLE-PLSV 304 (408)
Q Consensus 233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~~-~~~~ 304 (408)
+|+|++.+..+|+.|.+|+.|+++.|++..++|.. ..+|+|++|+.++++ .++++|++++++.+++++ ...+
T Consensus 29 GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~v~~~~~~~~lP~~~~~~~aa~l~~~~~t 108 (280)
T TIGR03366 29 GQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATAT 108 (280)
T ss_pred CCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEEecCCCcEEECCCCCCHHHhhHhhhHHHH
Confidence 99999999999999999999999999987666532 247999999999998 699999999998888877 4567
Q ss_pred hhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413 305 GVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL 384 (408)
Q Consensus 305 ~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~ 384 (408)
+++++++....+++++||+|+|++|++++|+++.+|+++|++++++++|++.++++|++.+++..+ ..+.++++
T Consensus 109 a~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~a~~~Ga~~~i~~~~------~~~~~~~~ 182 (280)
T TIGR03366 109 VMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEV------LAERQGGL 182 (280)
T ss_pred HHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCcEecCchh------hHHHHHHH
Confidence 788887666779999999988999999999999999988888889999999999999999988643 24556677
Q ss_pred hcCCCCceEEEcccchhhhhhcC
Q psy1413 385 LQGEQPDKTIDCSGIESTIKLGM 407 (408)
Q Consensus 385 ~~~~~~d~i~d~~g~~~~~~~~~ 407 (408)
+.++++|++||++|...+++.++
T Consensus 183 ~~~~g~d~vid~~G~~~~~~~~~ 205 (280)
T TIGR03366 183 QNGRGVDVALEFSGATAAVRACL 205 (280)
T ss_pred hCCCCCCEEEECCCChHHHHHHH
Confidence 77789999999999887766543
No 29
>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent. Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.
Probab=99.93 E-value=3.7e-25 Score=215.03 Aligned_cols=236 Identities=28% Similarity=0.477 Sum_probs=185.1
Q ss_pred ceeccceeeecccccCCCCC-------CcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHH
Q psy1413 68 ILRRRFSLRFREQKPIEDPD-------DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK 140 (408)
Q Consensus 68 ~~~~p~~~~~~~~~~lp~~~-------~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~ 140 (408)
++..|..+.. ++.++|.+. +.++++.+.++++|+.++.++. |. .....+..+|+|+.|+|..+|+..+
T Consensus 7 v~~~~~~~~~-~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~-g~---~~~~~p~i~GhE~~G~V~~vG~~V~ 81 (393)
T TIGR02819 7 VYLGPGKVEV-QDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVR-GR---TTAPTGLVLGHEITGEVIEKGRDVE 81 (393)
T ss_pred EEecCCceeE-EeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHC-CC---CCCCCCccccceeEEEEEEEcCccc
Confidence 4455666666 566777653 4788999999999998877653 21 1224567889999999999997655
Q ss_pred HHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHH
Q psy1413 141 HLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAK 220 (408)
Q Consensus 141 ~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~ 220 (408)
.++.
T Consensus 82 ~~~v---------------------------------------------------------------------------- 85 (393)
T TIGR02819 82 FIKI---------------------------------------------------------------------------- 85 (393)
T ss_pred cccC----------------------------------------------------------------------------
Confidence 4554
Q ss_pred cCCCCceEEEEEcCceeecCCCcccccccccCCcccccccee------ecccC---CCCccceeEEeeccc--eeeeCCC
Q psy1413 221 TGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF------FCATP---PDHGNLSRYYRHAAD--FCHKLPD 289 (408)
Q Consensus 221 ~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~---~~~g~~~~~~~~~~~--~~~~~p~ 289 (408)
+|+|.+.+..+|+.|.+|..|++++|.+.. ++|.. ..+|+|++|+.++.. .++++|+
T Consensus 86 ------------GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~vP~ 153 (393)
T TIGR02819 86 ------------GDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKFPD 153 (393)
T ss_pred ------------CCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEECCC
Confidence 999999999999999999999999999742 23321 246999999999964 6999999
Q ss_pred CCCc----cc-ccccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCe
Q psy1413 290 HVSL----EE-GALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADA 364 (408)
Q Consensus 290 ~~~~----~~-aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~ 364 (408)
+++. .. +++..++.++++++.+..+++++++||.|+|++|+.++|+++.+|++.+++++++++|++.++++|++.
T Consensus 154 ~~~~~~~~~~~a~l~~~~~ta~~a~~~~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~~~Ga~~ 233 (393)
T TIGR02819 154 RDQALEKIRDLTMLSDIFPTGYHGAVTAGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQARSFGCET 233 (393)
T ss_pred cccccccccceeeeccHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHcCCeE
Confidence 8753 22 334447788898887788899999999777999999999999999997776778889999999999985
Q ss_pred EEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 365 TVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 365 ~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
++... ..+..+.+.+++.++++|++|||+|.+
T Consensus 234 -v~~~~---~~~~~~~v~~~~~~~g~Dvvid~~G~~ 265 (393)
T TIGR02819 234 -VDLSK---DATLPEQIEQILGEPEVDCAVDCVGFE 265 (393)
T ss_pred -EecCC---cccHHHHHHHHcCCCCCcEEEECCCCc
Confidence 44432 145667788888778999999999986
No 30
>KOG1202|consensus
Probab=99.93 E-value=5.6e-25 Score=221.02 Aligned_cols=324 Identities=15% Similarity=0.128 Sum_probs=249.6
Q ss_pred CCeeeecccchhhhhcCCCCCCCC-----CCCccccCCccEEEEEeCCCCCCCCCCCEEEE------ccCcccccCCcce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRL-----SDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF------VPEFRNVCLSPIL 69 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~-----~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~------~~~~~~~~~~~~~ 69 (408)
|.+..||..|+.+. .|..+.-.. .--.++|-||+|+=. -|.||.. .++.+....+..|
T Consensus 1451 VYYAplNFRDiMLa-sGkL~~DAiPG~~a~qdclLGmEFsGRd~----------~GrRvM~mvpAksLATt~l~~rd~lW 1519 (2376)
T KOG1202|consen 1451 VYYAPLNFRDIMLA-SGKLSPDAIPGDLASQDCLLGMEFSGRDA----------SGRRVMGMVPAKSLATTVLASRDFLW 1519 (2376)
T ss_pred EEeccccHHHHHHh-cCCCCcccCCCccchhhheeceeeccccC----------CCcEEEEeeehhhhhhhhhcchhhhh
Confidence 34677899999877 444322111 124678999998533 3888863 2244567778899
Q ss_pred eccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEE-ccCccccccccccccccCcceeEEEccCchH--------
Q psy1413 70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYL-THGQIGDFRLSDPMIVGHEASGIVSKVGAKV-------- 139 (408)
Q Consensus 70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~-g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~-------- 139 (408)
..|.+++++++.++|..+.+++++.+....+ +|++++|+ |+|++|+++|.+|.+.|+. ++.++|+.+
T Consensus 1520 evP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~---VFTTVGSaEKRefL~~r 1596 (2376)
T KOG1202|consen 1520 EVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCT---VFTTVGSAEKREFLLKR 1596 (2376)
T ss_pred hCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCE---EEEecCcHHHHHHHHHh
Confidence 9999999999999999999999877665555 58899996 5999999999999999997 777777664
Q ss_pred -------------------------------------------HHHhhccCCcEEEEEccCCCCcccCHH-HHHhcCcEE
Q psy1413 140 -------------------------------------------KHLKATRPGGCLVIVGAGSQDVKIPLV-LTMTKEIDI 175 (408)
Q Consensus 140 -------------------------------------------~~~~~l~~gG~iv~~G~~~~~~~~~~~-~~~~~~~~l 175 (408)
.+++||+..||+..+|-..-.-+-++. ..++||.++
T Consensus 1597 FPqLqe~~~~NSRdtsFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsf 1676 (2376)
T KOG1202|consen 1597 FPQLQETNFANSRDTSFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSF 1676 (2376)
T ss_pred chhhhhhcccccccccHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccce
Confidence 469999999999999966544444443 567899999
Q ss_pred EEeecC-----C-CcHHHHHHHHHcCCCC--CCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceeecCCCccccc
Q psy1413 176 RGVFRY-----A-NDYPIALAMVASGKVD--VKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTC 247 (408)
Q Consensus 176 ~g~~~~-----~-~~~~~~~~l~~~g~~~--~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~~~~~~~~~~ 247 (408)
+|.... . +++.++..++++|.-+ +.|+.+++|+=.++++||+.|.+++ +.+||+++.+.-
T Consensus 1677 HGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRfMasGK-HIGKVvikvr~e----------- 1744 (2376)
T KOG1202|consen 1677 HGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRFMASGK-HIGKVVIKVRAE----------- 1744 (2376)
T ss_pred eeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHHHhccC-ccceEEEEEccc-----------
Confidence 998633 2 5689999999998754 7889999999999999999999975 456666653210
Q ss_pred ccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCcCCCCEEEEEec-c
Q psy1413 248 TYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGA-G 326 (408)
Q Consensus 248 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~-G 326 (408)
.. +-..++-.....++.+..+.|..+|+|+|+ |
T Consensus 1745 -------------------------------------------E~---~k~~~pk~r~i~AI~rt~~hpeksYii~GGLG 1778 (2376)
T KOG1202|consen 1745 -------------------------------------------EP---AKAKGPKPRLISAIPRTYCHPEKSYIIVGGLG 1778 (2376)
T ss_pred -------------------------------------------cc---ccccCCchhhHhhcchhhcCccceEEEecccc
Confidence 00 001112223344556667899999999999 9
Q ss_pred hhHHHHHHHHHHhCCCeEEEEecChhhH-------HHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413 327 PIGLVTLLTARALGASRVVITDILEHKL-------KTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396 (408)
Q Consensus 327 ~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-------~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~ 396 (408)
|+|+.++||+..+|+|.+++++|++-|- +.+++.|....++..+.++.+++++.+.+.+.-..+..|||-
T Consensus 1779 GFGLELaqWLi~RGar~lVLtSRsGirtGYQa~~vrrWr~~GVqV~vsT~nitt~~ga~~Li~~s~kl~~vGGiFnL 1855 (2376)
T KOG1202|consen 1779 GFGLELAQWLIQRGARKLVLTSRSGIRTGYQALMVRRWRRRGVQVQVSTSNITTAEGARGLIEESNKLGPVGGIFNL 1855 (2376)
T ss_pred chhHHHHHHHHhcCceEEEEeccccchhhHHHHHHHHHHhcCeEEEEecccchhhhhHHHHHHHhhhcccccchhhH
Confidence 9999999999999999999999997663 457788999999999998999999999998876677777763
No 31
>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase. The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.
Probab=99.93 E-value=1.4e-25 Score=216.94 Aligned_cols=226 Identities=20% Similarity=0.252 Sum_probs=156.6
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccccc----------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC---------------- 64 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~---------------- 64 (408)
|+++|||++|++.+. |..+ ...+|.++|||++|+|+++|++|++|++||||++.+...|..
T Consensus 33 v~a~gi~~sD~~~~~-g~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~ 109 (368)
T TIGR02818 33 IVATGVCHTDAFTLS-GADP--EGVFPVILGHEGAGIVEAVGEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVR 109 (368)
T ss_pred EEEecccHHHHHHhc-CCCC--CCCCCeeeccccEEEEEEECCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcc
Confidence 468999999999884 3322 235799999999999999999999999999998755322111
Q ss_pred --------------------------------------CCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeE
Q psy1413 65 --------------------------------------LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDV 105 (408)
Q Consensus 65 --------------------------------------~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~v 105 (408)
...++..|+++++++.+.++.+..+++.+...... ..++++
T Consensus 110 ~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~V 189 (368)
T TIGR02818 110 ETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAVLNTAKVEEGDTV 189 (368)
T ss_pred cccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHHHhhhhcchhHHHHHHHHHhcCCCCCCEE
Confidence 11223334444443333333232222211111111 247899
Q ss_pred EEEccCccccccccccccccC-c-------------------------------------------ceeEEEccCch---
Q psy1413 106 HYLTHGQIGDFRLSDPMIVGH-E-------------------------------------------ASGIVSKVGAK--- 138 (408)
Q Consensus 106 lv~g~G~vG~~~i~~a~~~G~-~-------------------------------------------~~~vv~~~g~~--- 138 (408)
+|+|+|++|++++|+|+.+|+ . ++.+++++|..
T Consensus 190 lV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~ 269 (368)
T TIGR02818 190 AVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVM 269 (368)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHH
Confidence 999999999999998887775 1 23455555532
Q ss_pred HHHHhhccCC-cEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413 139 VKHLKATRPG-GCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLED 211 (408)
Q Consensus 139 ~~~~~~l~~g-G~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~ 211 (408)
.+++++++++ |+++.+|.+.. +.+++...++. +..+.+++.. ..+++++++++++++++++++++|+|||+|
T Consensus 270 ~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~ 348 (368)
T TIGR02818 270 RAALECCHKGWGESIIIGVAGAGQEISTRPFQLVT-GRVWRGSAFGGVKGRTELPGIVEQYMKGEIALDDFVTHTMPLED 348 (368)
T ss_pred HHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhc-cceEEEeeccCCCcHHHHHHHHHHHHCCCCCchhheeEEecHHH
Confidence 2678999886 99999998643 34444444443 4457777643 257899999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEE
Q psy1413 212 TLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 212 ~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+++||+.+.+++ ..|+++.
T Consensus 349 ~~~A~~~~~~~~--~~k~~v~ 367 (368)
T TIGR02818 349 INEAFDLMHEGK--SIRTVIH 367 (368)
T ss_pred HHHHHHHHhCCC--ceeEEee
Confidence 999999998764 4688775
No 32
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.93 E-value=2.6e-25 Score=214.27 Aligned_cols=228 Identities=21% Similarity=0.207 Sum_probs=157.7
Q ss_pred CCeeeecccchhhhhcCCCCCC-CCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceec--------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDF-RLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRR-------- 71 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~-~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~-------- 71 (408)
|+++|||++|++.+. |..+.. ...+|.++|||++|+|+++|++ +.|++||||+..+...|..+..|..+
T Consensus 32 v~a~gi~~~D~~~~~-g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~ 109 (355)
T cd08230 32 TLEVGVCGTDREIVA-GEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETG 109 (355)
T ss_pred EEEEEeccccHHHHc-CCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCc
Confidence 579999999999884 432222 1246899999999999999999 99999999987653322111111100
Q ss_pred --------------cceeeec--ccccCCCCCCcce-EEEEee---------------e-eecCCeEEEEccCccccccc
Q psy1413 72 --------------RFSLRFR--EQKPIEDPDDHEV-LLEMHC---------------V-GICGSDVHYLTHGQIGDFRL 118 (408)
Q Consensus 72 --------------p~~~~~~--~~~~lp~~~~~~~-~~~~~~---------------~-~~~g~~vlv~g~G~vG~~~i 118 (408)
.+++..+ ...++|...+.+. +..... . ...+++++|.|+|++|++++
T Consensus 110 ~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~~~a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~G~vG~~a~ 189 (355)
T cd08230 110 EYTERGIKGLHGFMREYFVDDPEYLVKVPPSLADVGVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGAGPIGLLAA 189 (355)
T ss_pred ceeccCcCCCCccceeEEEeccccEEECCCCCCcceeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECCCHHHHHHH
Confidence 0111111 1122332222110 110000 0 12578999999999999999
Q ss_pred cccccccCc----------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEc
Q psy1413 119 SDPMIVGHE----------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVG 155 (408)
Q Consensus 119 ~~a~~~G~~----------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G 155 (408)
|+++.+|+. ++.+++++|... +++++++++|+++.+|
T Consensus 190 q~ak~~G~~vi~~~~~~~~~~~~~~~~~~Ga~~v~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G 269 (355)
T cd08230 190 LLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLIIEATGVPPLAFEALPALAPNGVVILFG 269 (355)
T ss_pred HHHHHcCCeEEEEecCCCCHHHHHHHHHcCCEEecCCccchhhhhhcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEe
Confidence 888776641 355666676532 6899999999999999
Q ss_pred cCCC--CcccC----HHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCC----CCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 156 AGSQ--DVKIP----LVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKV----DVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 156 ~~~~--~~~~~----~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~----~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
.+.. ..+++ ...+++|++++.|++..+ ++++++++++.++++ +++++++++|+|+|+.+||+.+.++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~-- 347 (355)
T cd08230 270 VPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDG-- 347 (355)
T ss_pred cCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccC--
Confidence 7665 45565 356788999999998766 789999999998873 4678899999999999999988654
Q ss_pred CceEEEEEc
Q psy1413 225 NAIKVMIHC 233 (408)
Q Consensus 225 ~~~kvvi~~ 233 (408)
..|+++++
T Consensus 348 -~~K~v~~~ 355 (355)
T cd08230 348 -EIKVVIEW 355 (355)
T ss_pred -CeEEEeeC
Confidence 25888764
No 33
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.92 E-value=2.1e-24 Score=208.82 Aligned_cols=239 Identities=30% Similarity=0.451 Sum_probs=192.0
Q ss_pred ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413 73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV 152 (408)
Q Consensus 73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv 152 (408)
+.+.+ ++.+.|.+.+.++++.+.++++++.++.+.. |... ...++..+|.|+.|+|..+|...+.++.
T Consensus 13 ~~~~~-~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~-g~~~--~~~~p~v~G~E~~G~V~~vG~~v~~~~v-------- 80 (368)
T cd08300 13 KPLSI-EEVEVAPPKAGEVRIKILATGVCHTDAYTLS-GADP--EGLFPVILGHEGAGIVESVGEGVTSVKP-------- 80 (368)
T ss_pred CCcEE-EEeecCCCCCCEEEEEEEEEEechhhHHHhc-CCCc--cCCCCceeccceeEEEEEeCCCCccCCC--------
Confidence 34556 5567788888899999999999988876642 2111 1245667899999999999975444444
Q ss_pred EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
T Consensus 81 -------------------------------------------------------------------------------- 80 (368)
T cd08300 81 -------------------------------------------------------------------------------- 80 (368)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceeecCCCcccccccccCCccccccceeec---ccC-----------------CCCccceeEEeeccceeeeCCCCCC
Q psy1413 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---ATP-----------------PDHGNLSRYYRHAADFCHKLPDHVS 292 (408)
Q Consensus 233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~-----------------~~~g~~~~~~~~~~~~~~~~p~~~~ 292 (408)
+|+|+..+..+|++|.+|.+++++.|++.... |.. ...|+|++|+.++++.++++|++++
T Consensus 81 GdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~ 160 (368)
T cd08300 81 GDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAP 160 (368)
T ss_pred CCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCC
Confidence 89998888889999999999999999864311 100 0247999999999999999999999
Q ss_pred cccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413 293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR 370 (408)
Q Consensus 293 ~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~ 370 (408)
+++++.++ ...++++++ ....+++++++||+|+|++|+.++|+++.+|+++|++++++++|++.++++|+++++++++
T Consensus 161 ~~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~ 240 (368)
T cd08300 161 LDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKD 240 (368)
T ss_pred hhhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccc
Confidence 98888877 567788876 5578899999999988999999999999999977999999999999999999999998765
Q ss_pred CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413 371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
. .+++.+.+++++++ ++|++|||+|+...++.+
T Consensus 241 ~--~~~~~~~v~~~~~~-g~d~vid~~g~~~~~~~a 273 (368)
T cd08300 241 H--DKPIQQVLVEMTDG-GVDYTFECIGNVKVMRAA 273 (368)
T ss_pred c--chHHHHHHHHHhCC-CCcEEEECCCChHHHHHH
Confidence 1 13577888888875 899999999987665544
No 34
>PLN02827 Alcohol dehydrogenase-like
Probab=99.92 E-value=2.3e-24 Score=208.97 Aligned_cols=243 Identities=26% Similarity=0.381 Sum_probs=191.8
Q ss_pred cceeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhc
Q psy1413 67 PILRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKAT 145 (408)
Q Consensus 67 ~~~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l 145 (408)
.++..+. .+.. ++.++|.+.+.++++.+.++++++.++.+..... .....+|.|+.|+|..+|+....++.
T Consensus 16 ~~~~~~~~~~~~-~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~------~~p~i~GhE~~G~V~~vG~~v~~~~~- 87 (378)
T PLN02827 16 AVAWGAGEALVM-EEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA------LFPRIFGHEASGIVESIGEGVTEFEK- 87 (378)
T ss_pred EEEecCCCCceE-EEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC------CCCeeecccceEEEEEcCCCCcccCC-
Confidence 3344433 4666 5678888888999999999999998876642110 23456899999999999975444444
Q ss_pred cCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCC
Q psy1413 146 RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGN 225 (408)
Q Consensus 146 ~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~ 225 (408)
T Consensus 88 -------------------------------------------------------------------------------- 87 (378)
T PLN02827 88 -------------------------------------------------------------------------------- 87 (378)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred ceEEEEEcCceeecCCCcccccccccCCccccccceeec----------------ccCC----CCccceeEEeeccceee
Q psy1413 226 AIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC----------------ATPP----DHGNLSRYYRHAADFCH 285 (408)
Q Consensus 226 ~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------------~~~~----~~g~~~~~~~~~~~~~~ 285 (408)
+|+|...+..+|+.|.+|..|+++.|++.... |... .+|+|++|+.++++.++
T Consensus 88 -------GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~ 160 (378)
T PLN02827 88 -------GDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAV 160 (378)
T ss_pred -------CCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheE
Confidence 89999888889999999999999999874211 1100 24899999999999999
Q ss_pred eCCCCCCcccccccch-hhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCC
Q psy1413 286 KLPDHVSLEEGALLEP-LSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGAD 363 (408)
Q Consensus 286 ~~p~~~~~~~aa~~~~-~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~ 363 (408)
++|+++++++++++++ +.++++++ ....+++++++||+|+|++|+.++|+++.+|++.|++++++++|.+.++++|++
T Consensus 161 ~iP~~l~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a~~lGa~ 240 (378)
T PLN02827 161 KVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVT 240 (378)
T ss_pred ECCCCCCHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCc
Confidence 9999999988887764 45566655 456789999999998899999999999999998788888899999999999999
Q ss_pred eEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413 364 ATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407 (408)
Q Consensus 364 ~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~ 407 (408)
.++++++ ..+++.+.+++++.+ ++|++|||+|....++.++
T Consensus 241 ~~i~~~~--~~~~~~~~v~~~~~~-g~d~vid~~G~~~~~~~~l 281 (378)
T PLN02827 241 DFINPND--LSEPIQQVIKRMTGG-GADYSFECVGDTGIATTAL 281 (378)
T ss_pred EEEcccc--cchHHHHHHHHHhCC-CCCEEEECCCChHHHHHHH
Confidence 9998764 114677788888865 8999999999876665543
No 35
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=99.92 E-value=1.6e-24 Score=204.41 Aligned_cols=211 Identities=32% Similarity=0.396 Sum_probs=176.4
Q ss_pred ccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcE
Q psy1413 71 RRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGC 150 (408)
Q Consensus 71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~ 150 (408)
.|+.+.+ ++.+.|.+...++++++.+++++..++++.... .....+++...|.|+.|+|+.+|+..+.++.
T Consensus 11 ~~~~l~~-~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~--~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~------ 81 (326)
T COG0604 11 GPEVLKV-VEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGL--APPVRPLPFIPGSEAAGVVVAVGSGVTGFKV------ 81 (326)
T ss_pred CCceeEE-EecCCCCCCCCeEEEEEEEeecChHHHHhccCC--CCCCCCCCCcccceeEEEEEEeCCCCCCcCC------
Confidence 4556777 788889999999999999999998888775311 2223457889999999999999976554443
Q ss_pred EEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413 151 LVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM 230 (408)
Q Consensus 151 iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv 230 (408)
T Consensus 82 -------------------------------------------------------------------------------- 81 (326)
T COG0604 82 -------------------------------------------------------------------------------- 81 (326)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCceeecCCCcccccccccCCccccccceeecccCC-CCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhh
Q psy1413 231 IHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP-DHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHA 308 (408)
Q Consensus 231 i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~ 308 (408)
+|+|...+ .. ..|+|+||..++++.+.++|+++++++||.++ ...|+|++
T Consensus 82 --GdrV~~~~--------------------------~~~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~TA~~~ 133 (326)
T COG0604 82 --GDRVAALG--------------------------GVGRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGLTAWLA 133 (326)
T ss_pred --CCEEEEcc--------------------------CCCCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHHHHHHH
Confidence 88886532 01 47999999999999999999999999999888 67778888
Q ss_pred h-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413 309 C-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ 386 (408)
Q Consensus 309 ~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~ 386 (408)
+ +...+++++++||+|+ |++|+.++|+++++|++ ++++.++++|.++++++||++++++++ +++.+.+++++.
T Consensus 134 l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~-~v~~~~s~~k~~~~~~lGAd~vi~y~~----~~~~~~v~~~t~ 208 (326)
T COG0604 134 LFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGAT-VVAVVSSSEKLELLKELGADHVINYRE----EDFVEQVRELTG 208 (326)
T ss_pred HHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCc-EEEEecCHHHHHHHHhcCCCEEEcCCc----ccHHHHHHHHcC
Confidence 8 5588999999999998 99999999999999995 666667777777999999999999988 789999999999
Q ss_pred CCCCceEEEcccchhhh
Q psy1413 387 GEQPDKTIDCSGIESTI 403 (408)
Q Consensus 387 ~~~~d~i~d~~g~~~~~ 403 (408)
++++|+|||++|+....
T Consensus 209 g~gvDvv~D~vG~~~~~ 225 (326)
T COG0604 209 GKGVDVVLDTVGGDTFA 225 (326)
T ss_pred CCCceEEEECCCHHHHH
Confidence 99999999999977543
No 36
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.92 E-value=4e-25 Score=212.88 Aligned_cols=227 Identities=18% Similarity=0.206 Sum_probs=165.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
|.++|||++|++.+. |.++ ...+|.++|||++|+|+++|++|+.|++||||++.+..
T Consensus 41 v~a~gi~~~D~~~~~-g~~~--~~~~p~i~G~E~~G~Vv~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~ 117 (357)
T PLN02514 41 VIYCGICHTDLHQIK-NDLG--MSNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKR 117 (357)
T ss_pred EEEeccChHHHHhhc-CCcC--cCCCCccCCceeeEEEEEECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCc
Confidence 468999999999884 4322 22568999999999999999999999999999753210
Q ss_pred ---------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccc
Q psy1413 61 ---------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRL 118 (408)
Q Consensus 61 ---------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i 118 (408)
...+...++..|+++++++.++++....+++.+...... ..+++++|+|+|++|++++
T Consensus 118 ~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av 197 (357)
T PLN02514 118 IWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGV 197 (357)
T ss_pred cccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhhhhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHH
Confidence 111122334445555554444444443333321111111 2578899999999999999
Q ss_pred cccccccCc--------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccC
Q psy1413 119 SDPMIVGHE--------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAG 157 (408)
Q Consensus 119 ~~a~~~G~~--------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~ 157 (408)
++++.+|+. ++.+++++|.. .+++++++++|+++.+|.+
T Consensus 198 ~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~ 277 (357)
T PLN02514 198 KIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQEAADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVI 277 (357)
T ss_pred HHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHHhcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCC
Confidence 888776641 34566666643 2689999999999999987
Q ss_pred CCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 158 SQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
..+.+++...++++++++.|++... .+++++++++++|+++ +++ ++|||+|+.+||+.+.+++. .+|+++..+
T Consensus 278 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~--~~i-~~~~l~~~~~A~~~~~~~~~-~gk~v~~~~ 351 (357)
T PLN02514 278 NTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLT--SMI-EVVKMDYVNTAFERLEKNDV-RYRFVVDVA 351 (357)
T ss_pred CCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCc--CcE-EEEcHHHHHHHHHHHHcCCC-ceeEEEEcc
Confidence 6667788888999999999998877 6899999999999864 455 58999999999999998764 467777653
No 37
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=99.92 E-value=2.1e-25 Score=210.43 Aligned_cols=228 Identities=25% Similarity=0.293 Sum_probs=184.9
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR 71 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~ 71 (408)
|+|+|||+.|+..++ |. .....++|+|||.|++|+|+++|++|+.|++||||+... ++...+.+.+...
T Consensus 34 V~a~gvN~~D~~~r~-G~-~~~~~~~P~i~G~d~aG~V~avG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~ 111 (326)
T COG0604 34 VKAAGVNPIDVLVRQ-GL-APPVRPLPFIPGSEAAGVVVAVGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPL 111 (326)
T ss_pred EEEeecChHHHHhcc-CC-CCCCCCCCCcccceeEEEEEEeCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeC
Confidence 579999999999985 43 223446899999999999999999999999999999873 3346777788899
Q ss_pred cceeeecccccCCCCCCcceEEEEeeeeec-CCeEEEEc-cCccccccccccccccC-----------------------
Q psy1413 72 RFSLRFREQKPIEDPDDHEVLLEMHCVGIC-GSDVHYLT-HGQIGDFRLSDPMIVGH----------------------- 126 (408)
Q Consensus 72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~-g~~vlv~g-~G~vG~~~i~~a~~~G~----------------------- 126 (408)
|+++++++++.+|..+.+++.+......+. +++|||+| +|+||.+++|+|+.+|+
T Consensus 112 P~~ls~~eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~~lGAd~v 191 (326)
T COG0604 112 PDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLKELGADHV 191 (326)
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHHhcCCCEE
Confidence 999999999999998888875544434343 89999987 89999999999999983
Q ss_pred -------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCC--CCcccCHHHHHhcCcEEEEeecCC-
Q psy1413 127 -------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS--QDVKIPLVLTMTKEIDIRGVFRYA- 182 (408)
Q Consensus 127 -------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l~g~~~~~- 182 (408)
.++.+++++|... +++++|+++|+++.+|... ....++...+..+.+.+.+.....
T Consensus 192 i~y~~~~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~ 271 (326)
T COG0604 192 INYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSR 271 (326)
T ss_pred EcCCcccHHHHHHHHcCCCCceEEEECCCHHHHHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceec
Confidence 3677888888664 6899999999999999776 456677788889999999987553
Q ss_pred ------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 183 ------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 183 ------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+.++++.+++++|++++ .++++|||+|..++..+...++...+|++++
T Consensus 272 ~~~~~~~~~~~l~~~~~~g~l~~--~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~ 325 (326)
T COG0604 272 DPEALAEALAELFDLLASGKLKP--VIDRVYPLAEAPAAAAHLLLERRTTGKVVLK 325 (326)
T ss_pred chHHHHHHHHHHHHHHHcCCCcc--eeccEechhhhHHHHHHHHcccCCcceEEEe
Confidence 35777999999999964 5789999999777776655555567888775
No 38
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.92 E-value=3.8e-25 Score=212.48 Aligned_cols=226 Identities=21% Similarity=0.325 Sum_probs=160.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccc-----------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNV----------------- 63 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~----------------- 63 (408)
|+++|||++|++.+..+ +. ..+|.++|||++|+|+++|++|++|++||||++.+...+.
T Consensus 32 v~~~gi~~~D~~~~~~~--~~--~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~ 107 (347)
T PRK10309 32 VASSGLCGSDIPRIFKN--GA--HYYPITLGHEFSGYVEAVGSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYD 107 (347)
T ss_pred EEEEEEchhcHHHHhCC--CC--CCCCcccccceEEEEEEeCCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcc
Confidence 46899999999864222 11 1358899999999999999999999999999976532221
Q ss_pred ----------------cCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccccC
Q psy1413 64 ----------------CLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIVGH 126 (408)
Q Consensus 64 ----------------~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~G~ 126 (408)
+...++..|+.+++++.+.+ .+...++.+ ..... ..+++++|.|+|++|++++|+++.+|+
T Consensus 108 ~~g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~-~~~~~~~~~-~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~ 185 (347)
T PRK10309 108 FIGSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFI-EPITVGLHA-FHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGA 185 (347)
T ss_pred eeccCCCCccceeEEeehHHeEECcCCCCHHHhhhh-hHHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 11222333444444222221 111111100 00111 147899999999999999888876664
Q ss_pred ------------------------------------------cce-eEEEccCch---HHHHhhccCCcEEEEEccCCCC
Q psy1413 127 ------------------------------------------EAS-GIVSKVGAK---VKHLKATRPGGCLVIVGAGSQD 160 (408)
Q Consensus 127 ------------------------------------------~~~-~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~ 160 (408)
.++ .+++++|.. .+++++++++|+++.+|....+
T Consensus 186 ~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~ 265 (347)
T PRK10309 186 KSVTAIDINSEKLALAKSLGAMQTFNSREMSAPQIQSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD 265 (347)
T ss_pred CeEEEECCCHHHHHHHHHcCCceEecCcccCHHHHHHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC
Confidence 123 567777754 2689999999999999987655
Q ss_pred cccC---HHHHHhcCcEEEEeecC------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 161 VKIP---LVLTMTKEIDIRGVFRY------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 161 ~~~~---~~~~~~~~~~l~g~~~~------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
.+++ +..+++|++++.|++.. .++++++++++++|+++++++++|+|+|+|+++||+.+.+++ ..+|+++
T Consensus 266 ~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~gKvvv 344 (347)
T PRK10309 266 LHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNP-MPGKVLL 344 (347)
T ss_pred cccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCC-cceEEEE
Confidence 4443 34678899999998753 256899999999999999999999999999999999998875 4578877
Q ss_pred Ec
Q psy1413 232 HC 233 (408)
Q Consensus 232 ~~ 233 (408)
+.
T Consensus 345 ~~ 346 (347)
T PRK10309 345 QI 346 (347)
T ss_pred eC
Confidence 53
No 39
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.92 E-value=3.5e-24 Score=205.86 Aligned_cols=243 Identities=26% Similarity=0.391 Sum_probs=195.9
Q ss_pred eeccce-eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 69 LRRRFS-LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 69 ~~~p~~-~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
+..+.. +.+ ++.+.|.+.+.++++++..+++++.++..+-.|.. .....+..+|+|+.|+|..+|.....+ .
T Consensus 4 ~~~~g~~~~~-~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~-~--- 76 (349)
T TIGR03201 4 MTEPGKPMVK-TRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVR--TNHALPLALGHEISGRVIQAGAGAASW-I--- 76 (349)
T ss_pred EecCCCCceE-EeccCCCCCCCeEEEEEEEEeecccchHHHcCCCC--ccCCCCeeccccceEEEEEeCCCcCCC-C---
Confidence 334443 566 56778888888999999999999888765421210 012335568999999999999642211 2
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 77 -------------------------------------------------------------------------------- 76 (349)
T TIGR03201 77 -------------------------------------------------------------------------------- 76 (349)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCC------CCCcccccccc-
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPD------HVSLEEGALLE- 300 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~------~~~~~~aa~~~- 300 (408)
+++|+..+..+|++|..|.+++++.|.+....|.. .+|+|++|+.++++.++++|+ +++.+.++.+.
T Consensus 77 -----GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~-~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~ 150 (349)
T TIGR03201 77 -----GKAVIVPAVIPCGECELCKTGRGTICRAQKMPGND-MQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVAD 150 (349)
T ss_pred -----CCEEEECCCCCCCCChhhhCcCcccCCCCCccCcC-CCCcccceEEechHHeEECCcccccccCCCHHHhhhhcc
Confidence 89999999999999999999999999886665543 469999999999999999999 78887777665
Q ss_pred hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHH
Q psy1413 301 PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTH 380 (408)
Q Consensus 301 ~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~ 380 (408)
...++++++.+..++++++++|+|+|++|+.++|+++.+|++ |++++++++|++.++++|++.++++.+. +.+++.+.
T Consensus 151 ~~~ta~~a~~~~~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~-vi~~~~~~~~~~~~~~~Ga~~~i~~~~~-~~~~~~~~ 228 (349)
T TIGR03201 151 AVTTPYQAAVQAGLKKGDLVIVIGAGGVGGYMVQTAKAMGAA-VVAIDIDPEKLEMMKGFGADLTLNPKDK-SAREVKKL 228 (349)
T ss_pred hHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHhCCceEecCccc-cHHHHHHH
Confidence 677788888778889999999999999999999999999996 8889999999999999999999987652 33578888
Q ss_pred HHHHhcCCCCc----eEEEcccchhhhhhc
Q psy1413 381 IIELLQGEQPD----KTIDCSGIESTIKLG 406 (408)
Q Consensus 381 ~~~~~~~~~~d----~i~d~~g~~~~~~~~ 406 (408)
++++++++++| .+|||+|+....+.+
T Consensus 229 ~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~ 258 (349)
T TIGR03201 229 IKAFAKARGLRSTGWKIFECSGSKPGQESA 258 (349)
T ss_pred HHhhcccCCCCCCcCEEEECCCChHHHHHH
Confidence 88998888887 899999988766554
No 40
>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase. Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.
Probab=99.92 E-value=7.6e-25 Score=210.45 Aligned_cols=226 Identities=20% Similarity=0.273 Sum_probs=160.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcc------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPI------------ 68 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~------------ 68 (408)
|+++|||++|++.+..+.. ...++|.++|||++|+|+++|++|+.+ +||||++.+...|..+..|
T Consensus 30 v~~~gic~sD~~~~~~~~~--~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~ 106 (349)
T TIGR03201 30 VAGCGVCHTDLSYYYMGVR--TNHALPLALGHEISGRVIQAGAGAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQK 106 (349)
T ss_pred EEEEeecccchHHHcCCCC--ccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCC
Confidence 4689999999998744431 123568999999999999999999887 9999987654332222221
Q ss_pred ---------------------eeccc------eeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccc
Q psy1413 69 ---------------------LRRRF------SLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSD 120 (408)
Q Consensus 69 ---------------------~~~p~------~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~ 120 (408)
+..|+ .+++++.+.++.+..+++.+.. ...+ .+++++|+|+|++|++++++
T Consensus 107 ~~g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~ta~~a~~-~~~~~~g~~VlV~G~G~vG~~a~~~ 185 (349)
T TIGR03201 107 MPGNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAV-QAGLKKGDLVIVIGAGGVGGYMVQT 185 (349)
T ss_pred ccCcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHH
Confidence 11111 1111111111111111111100 1112 47899999999999999888
Q ss_pred cccccCc---------------------------------------------c----eeEEEccCchH---HHHhhccCC
Q psy1413 121 PMIVGHE---------------------------------------------A----SGIVSKVGAKV---KHLKATRPG 148 (408)
Q Consensus 121 a~~~G~~---------------------------------------------~----~~vv~~~g~~~---~~~~~l~~g 148 (408)
++.+|+. + +.+++++|... .++++++++
T Consensus 186 a~~~G~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~ 265 (349)
T TIGR03201 186 AKAMGAAVVAIDIDPEKLEMMKGFGADLTLNPKDKSAREVKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHG 265 (349)
T ss_pred HHHcCCeEEEEcCCHHHHHHHHHhCCceEecCccccHHHHHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcC
Confidence 8766641 1 14677777543 578999999
Q ss_pred cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 149 GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 149 G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
|+++.+|.+..+..++...++.+++++.|++..+ .+++++++++++|++++.++++ +|||+|+++||+.+.+++. .+
T Consensus 266 G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~g~i~~~~~i~-~~~l~~~~~A~~~~~~~~~-~~ 343 (349)
T TIGR03201 266 GTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLDGKIQLGPFVE-RRPLDQIEHVFAAAHHHKL-KR 343 (349)
T ss_pred CeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHcCCCCcccceE-EecHHHHHHHHHHHHcCCc-cc
Confidence 9999999887667788888888999999998765 7899999999999999888876 6999999999999998764 46
Q ss_pred EEEEE
Q psy1413 228 KVMIH 232 (408)
Q Consensus 228 kvvi~ 232 (408)
|++++
T Consensus 344 k~~~~ 348 (349)
T TIGR03201 344 RAILT 348 (349)
T ss_pred eEEec
Confidence 66653
No 41
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.92 E-value=7.4e-25 Score=212.17 Aligned_cols=225 Identities=18% Similarity=0.221 Sum_probs=156.9
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------ 62 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------ 62 (408)
|.++|||++|++.+. |..+ ...+|.++|||++|+|+++|++|++|++||||++.+...|
T Consensus 34 v~a~gi~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~ 110 (369)
T cd08301 34 ILHTSLCHTDVYFWE-AKGQ--TPLFPRILGHEAAGIVESVGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLR 110 (369)
T ss_pred EEEEeeCchhHHHhc-CCCC--CCCCCcccccccceEEEEeCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcc
Confidence 468999999999884 4321 3467999999999999999999999999999987542211
Q ss_pred -------------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCe
Q psy1413 63 -------------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSD 104 (408)
Q Consensus 63 -------------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~ 104 (408)
.+...++..|+.+++++.+.++....+++.+...... ..+++
T Consensus 111 ~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~ 190 (369)
T cd08301 111 INTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKVKKGST 190 (369)
T ss_pred cccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCCHHHhhhhcchhhHHHHHHHhhcCCCCCCE
Confidence 1111223333334332222222222222211111111 24789
Q ss_pred EEEEccCccccccccccccccC-c-------------------------------------------ceeEEEccCch--
Q psy1413 105 VHYLTHGQIGDFRLSDPMIVGH-E-------------------------------------------ASGIVSKVGAK-- 138 (408)
Q Consensus 105 vlv~g~G~vG~~~i~~a~~~G~-~-------------------------------------------~~~vv~~~g~~-- 138 (408)
++|+|+|++|++++|+++.+|+ . ++.+++++|..
T Consensus 191 VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~ 270 (369)
T cd08301 191 VAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDA 270 (369)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHH
Confidence 9999999999999998887775 1 23344555432
Q ss_pred -HHHHhhccCC-cEEEEEccCCC--CcccCHHHHHhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeeccc
Q psy1413 139 -VKHLKATRPG-GCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLLE 210 (408)
Q Consensus 139 -~~~~~~l~~g-G~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~ 210 (408)
.+++++++++ |+++.+|.... .++++...+ ++++++.|++..+ .+++++++++++++++++++++++|||+
T Consensus 271 ~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~-~~~~~i~g~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~ 349 (369)
T cd08301 271 MISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL-LNGRTLKGTLFGGYKPKTDLPNLVEKYMKKELELEKFITHELPFS 349 (369)
T ss_pred HHHHHHHhhcCCCEEEEECcCCCCcccccCHHHH-hcCCeEEEEecCCCChHHHHHHHHHHHHcCCCCcHHheeeeecHH
Confidence 2578899996 99999998764 344554444 4799999987542 4689999999999999999999999999
Q ss_pred hHHHHHHHHHcCCCCceEEEE
Q psy1413 211 DTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 211 ~~~~a~~~~~~~~~~~~kvvi 231 (408)
|+++||+.+.+++. .|+++
T Consensus 350 ~~~~A~~~~~~~~~--~k~~~ 368 (369)
T cd08301 350 EINKAFDLLLKGEC--LRCIL 368 (369)
T ss_pred HHHHHHHHHHCCCc--eeEEe
Confidence 99999999998753 57765
No 42
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.92 E-value=9.3e-25 Score=211.09 Aligned_cols=224 Identities=22% Similarity=0.260 Sum_probs=160.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------ 62 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------ 62 (408)
|+++|||++|++.+. |. .+..+|.++|||++|+|+++|++|+++++||||+..+...|
T Consensus 34 v~~~gi~~sD~~~~~-g~---~~~~~p~i~G~e~~G~V~~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~ 109 (365)
T cd08277 34 MLATSVCHTDILAIE-GF---KATLFPVILGHEGAGIVESVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYR 109 (365)
T ss_pred EEEEeechhhHHHhc-CC---CCCCCCeecccceeEEEEeeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCcc
Confidence 468999999999884 32 23467899999999999999999999999999987542211
Q ss_pred -----------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEE
Q psy1413 63 -----------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVH 106 (408)
Q Consensus 63 -----------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vl 106 (408)
.+...++..|+++++++.+.++.+..+++.+...... ..+++++
T Consensus 110 ~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vl 189 (365)
T cd08277 110 ANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVA 189 (365)
T ss_pred ccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHHHhhHhcchhHHHHHHHHhhcCCCCCCEEE
Confidence 1112333344444443333333333333321111111 2478999
Q ss_pred EEccCccccccccccccccCc--------------------------------------------ceeEEEccCch---H
Q psy1413 107 YLTHGQIGDFRLSDPMIVGHE--------------------------------------------ASGIVSKVGAK---V 139 (408)
Q Consensus 107 v~g~G~vG~~~i~~a~~~G~~--------------------------------------------~~~vv~~~g~~---~ 139 (408)
|+|+|++|++++++++.+|+. ++.+++++|.. .
T Consensus 190 V~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~ 269 (365)
T cd08277 190 VFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMN 269 (365)
T ss_pred EECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHH
Confidence 999999999998888877751 23345555532 2
Q ss_pred HHHhhccCC-cEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeeccchHH
Q psy1413 140 KHLKATRPG-GCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLLEDTL 213 (408)
Q Consensus 140 ~~~~~l~~g-G~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~ 213 (408)
+++++++++ |+++.+|.... ..+++...++. ++++.|++... .+++++++++++++++++++++++|+|+|++
T Consensus 270 ~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~ 348 (365)
T cd08277 270 EALESTKLGWGVSVVVGVPPGAELSIRPFQLIL-GRTWKGSFFGGFKSRSDVPKLVSKYMNKKFDLDELITHVLPFEEIN 348 (365)
T ss_pred HHHHhcccCCCEEEEEcCCCccccccCHhHHhh-CCEEEeeecCCCChHHHHHHHHHHHHCCCcChhHheeeEEchhhHH
Confidence 578899885 99999998653 45666666664 89999887643 4689999999999999999999999999999
Q ss_pred HHHHHHHcCCCCceEEEE
Q psy1413 214 HAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 214 ~a~~~~~~~~~~~~kvvi 231 (408)
+||+.+.+++ ..|+++
T Consensus 349 ~A~~~~~~~~--~~k~~i 364 (365)
T cd08277 349 KGFDLMKSGE--CIRTVI 364 (365)
T ss_pred HHHHHHHCCC--CceEee
Confidence 9999998875 467765
No 43
>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional
Probab=99.92 E-value=5.4e-24 Score=204.46 Aligned_cols=238 Identities=34% Similarity=0.555 Sum_probs=191.1
Q ss_pred eccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEE-EccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 70 RRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHY-LTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 70 ~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv-~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
..+..+.. .+.+.|.+ .+..+++.+.++++++.++.. .+.+. . ..+...|.++.|+|..+|+..+.++.
T Consensus 7 ~~~~~~~~-~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~~--~---~~p~i~G~e~~G~V~~vG~~v~~~~v--- 77 (347)
T PRK10309 7 DTDGIVRV-AESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNGA--H---YYPITLGHEFSGYVEAVGSGVDDLHP--- 77 (347)
T ss_pred eCCCceEE-EECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCCC--C---CCCcccccceEEEEEEeCCCCCCCCC---
Confidence 33445555 55677776 478889999999998877643 22221 1 13556899999999999975443444
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 78 -------------------------------------------------------------------------------- 77 (347)
T PRK10309 78 -------------------------------------------------------------------------------- 77 (347)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhh
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVH 307 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~ 307 (408)
+|+|+..+..+|+.|.+|..|.++.|.+....+. ..+|+|++|+.++++.++++|+++++++++.+++++++++
T Consensus 78 -----Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~~~~~~~~ 151 (347)
T PRK10309 78 -----GDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGS-RRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIEPITVGLH 151 (347)
T ss_pred -----CCEEEECCCcCCCCCcchhCcCcccCCCcceecc-CCCCccceeEEeehHHeEECcCCCCHHHhhhhhHHHHHHH
Confidence 9999998888999999999999999988665554 3589999999999999999999999998887766666777
Q ss_pred hhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387 (408)
Q Consensus 308 ~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~ 387 (408)
++....++++++++|+|+|++|+.++|+|+.+|++.|+++++++++++.++++|++.++++++ .+ .+.+.+++.+
T Consensus 152 ~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~----~~-~~~~~~~~~~ 226 (347)
T PRK10309 152 AFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALAKSLGAMQTFNSRE----MS-APQIQSVLRE 226 (347)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHcCCceEecCcc----cC-HHHHHHHhcC
Confidence 776777889999999988999999999999999987888899999999999999999998765 23 3456667767
Q ss_pred CCCc-eEEEcccchhhhhhcC
Q psy1413 388 EQPD-KTIDCSGIESTIKLGM 407 (408)
Q Consensus 388 ~~~d-~i~d~~g~~~~~~~~~ 407 (408)
.++| ++|||+|+..+++.++
T Consensus 227 ~~~d~~v~d~~G~~~~~~~~~ 247 (347)
T PRK10309 227 LRFDQLILETAGVPQTVELAI 247 (347)
T ss_pred CCCCeEEEECCCCHHHHHHHH
Confidence 7898 9999999887766553
No 44
>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the
Probab=99.91 E-value=1.1e-23 Score=203.92 Aligned_cols=238 Identities=28% Similarity=0.407 Sum_probs=190.3
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.. +..++|.+.+.++++.+.++++++.++.++- |... ...++..+|.|+.|+|..+|+..+.++.
T Consensus 14 ~~~l-~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~--------- 80 (369)
T cd08301 14 PLVI-EEVEVAPPQAMEVRIKILHTSLCHTDVYFWE-AKGQ--TPLFPRILGHEAAGIVESVGEGVTDLKP--------- 80 (369)
T ss_pred CcEE-EEeeCCCCCCCeEEEEEEEEeeCchhHHHhc-CCCC--CCCCCcccccccceEEEEeCCCCCcccc---------
Confidence 4566 5667788888999999999999998876642 1111 1234567899999999999975444444
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 81 -------------------------------------------------------------------------------G 81 (369)
T cd08301 81 -------------------------------------------------------------------------------G 81 (369)
T ss_pred -------------------------------------------------------------------------------C
Confidence 9
Q ss_pred CceeecCCCcccccccccCCccccccceeec---ccC------------------CCCccceeEEeeccceeeeCCCCCC
Q psy1413 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---ATP------------------PDHGNLSRYYRHAADFCHKLPDHVS 292 (408)
Q Consensus 234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~------------------~~~g~~~~~~~~~~~~~~~~p~~~~ 292 (408)
|+|+..+..+|++|..|..+.++.|.+.... |.. ...|+|++|..++++.++++|++++
T Consensus 82 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~ 161 (369)
T cd08301 82 DHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEAP 161 (369)
T ss_pred CEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCCC
Confidence 9999888899999999999999999875432 110 0248899999999999999999999
Q ss_pred cccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413 293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR 370 (408)
Q Consensus 293 ~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~ 370 (408)
++++++++ ...++++++ ....+++++++||+|+|++|++++|+++.+|+.+|+++++++++.+.++++|++.++++.+
T Consensus 162 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~~~~Ga~~~i~~~~ 241 (369)
T cd08301 162 LDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKD 241 (369)
T ss_pred HHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEEcccc
Confidence 98888776 456677765 5577899999999988999999999999999977999999999999999999999998754
Q ss_pred CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413 371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
. .+++.+.+++++.+ ++|++|||+|+......+
T Consensus 242 ~--~~~~~~~v~~~~~~-~~d~vid~~G~~~~~~~~ 274 (369)
T cd08301 242 H--DKPVQEVIAEMTGG-GVDYSFECTGNIDAMISA 274 (369)
T ss_pred c--chhHHHHHHHHhCC-CCCEEEECCCChHHHHHH
Confidence 1 13566778888765 899999999987655443
No 45
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.91 E-value=1.1e-23 Score=202.54 Aligned_cols=245 Identities=38% Similarity=0.631 Sum_probs=198.5
Q ss_pred ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccc--------cccccccccCcceeEEEccCchH
Q psy1413 68 ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF--------RLSDPMIVGHEASGIVSKVGAKV 139 (408)
Q Consensus 68 ~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~--------~i~~a~~~G~~~~~vv~~~g~~~ 139 (408)
++..|+.+.+ +..+.|.+.+.++++++.++++++.++...-.+..... .......+|.++.|+|..+|...
T Consensus 5 ~~~~~~~l~~-~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v 83 (351)
T cd08233 5 RYHGRKDIRV-EEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGV 83 (351)
T ss_pred EEecCCceEE-EeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCC
Confidence 3445666777 66788888888999999999998877654321211000 01235568999999999999754
Q ss_pred HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHH
Q psy1413 140 KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETA 219 (408)
Q Consensus 140 ~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~ 219 (408)
+.++.
T Consensus 84 ~~~~~--------------------------------------------------------------------------- 88 (351)
T cd08233 84 TGFKV--------------------------------------------------------------------------- 88 (351)
T ss_pred CCCCC---------------------------------------------------------------------------
Confidence 33333
Q ss_pred HcCCCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCccccccc
Q psy1413 220 KTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALL 299 (408)
Q Consensus 220 ~~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~ 299 (408)
+|+|...+..+|++|.+|..+.+++|.+..+++....+|+|++|+.++.+.++++|++++.++++.+
T Consensus 89 -------------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~~ 155 (351)
T cd08233 89 -------------GDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEAALV 155 (351)
T ss_pred -------------CCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHhhhc
Confidence 8999988888999999999999999998766554434799999999999999999999998888876
Q ss_pred chhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHH
Q psy1413 300 EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIST 379 (408)
Q Consensus 300 ~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~ 379 (408)
.++.++|+++....++++++++|+|+|++|++++|+++.+|+++|+++++++++.+.++++|++.++++++ .++.+
T Consensus 156 ~~~~ta~~~l~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~----~~~~~ 231 (351)
T cd08233 156 EPLAVAWHAVRRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTE----VDVVA 231 (351)
T ss_pred cHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCc----cCHHH
Confidence 67778899887788899999999988999999999999999977999999999999999999999999876 56777
Q ss_pred HHHHHhcCCCCceEEEcccchhhhhh
Q psy1413 380 HIIELLQGEQPDKTIDCSGIESTIKL 405 (408)
Q Consensus 380 ~~~~~~~~~~~d~i~d~~g~~~~~~~ 405 (408)
.+++.+.++++|++|||+|...+++.
T Consensus 232 ~l~~~~~~~~~d~vid~~g~~~~~~~ 257 (351)
T cd08233 232 EVRKLTGGGGVDVSFDCAGVQATLDT 257 (351)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHH
Confidence 88888877789999999997655543
No 46
>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim
Probab=99.91 E-value=2.3e-24 Score=208.54 Aligned_cols=226 Identities=20% Similarity=0.257 Sum_probs=156.8
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN------------------ 62 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~------------------ 62 (408)
|+++|||++|++.+. |..+ ...+|.++|||++|+|+++|++|++|++||||+..+...|
T Consensus 34 v~a~gi~~~D~~~~~-g~~~--~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~ 110 (368)
T cd08300 34 ILATGVCHTDAYTLS-GADP--EGLFPVILGHEGAGIVESVGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIR 110 (368)
T ss_pred EEEEEechhhHHHhc-CCCc--cCCCCceeccceeEEEEEeCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCcc
Confidence 468999999999884 3322 2367999999999999999999999999999986532111
Q ss_pred ------------------------------------ccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeE
Q psy1413 63 ------------------------------------VCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDV 105 (408)
Q Consensus 63 ------------------------------------~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~v 105 (408)
.+...++..|+++++++.+.++.+..+++.+......+ .++++
T Consensus 111 ~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~ta~~a~~~~~~~~~g~~V 190 (368)
T cd08300 111 ATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTV 190 (368)
T ss_pred ccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCChhhhhhhccchhhhHHHHHHhcCCCCCCEE
Confidence 11123334455555533333433333333221111122 47899
Q ss_pred EEEccCccccccccccccccCc--------------------------------------------ceeEEEccCch---
Q psy1413 106 HYLTHGQIGDFRLSDPMIVGHE--------------------------------------------ASGIVSKVGAK--- 138 (408)
Q Consensus 106 lv~g~G~vG~~~i~~a~~~G~~--------------------------------------------~~~vv~~~g~~--- 138 (408)
+|+|+|++|++++|+++.+|+. ++.+++++|..
T Consensus 191 lV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~~~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~ 270 (368)
T cd08300 191 AVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELAKKFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVM 270 (368)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHH
Confidence 9999999999999988877651 23455555542
Q ss_pred HHHHhhccCC-cEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413 139 VKHLKATRPG-GCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLED 211 (408)
Q Consensus 139 ~~~~~~l~~g-G~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~ 211 (408)
.+++++++++ |+++.+|.... +..++...+. ++.++.++... .+++++++++++++++++.++++++|+|+|
T Consensus 271 ~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~ 349 (368)
T cd08300 271 RAALEACHKGWGTSVIIGVAAAGQEISTRPFQLV-TGRVWKGTAFGGWKSRSQVPKLVEDYMKGKIKVDEFITHTMPLDE 349 (368)
T ss_pred HHHHHhhccCCCeEEEEccCCCCCccccCHHHHh-hcCeEEEEEecccCcHHHHHHHHHHHHcCCCChhhceeeeEcHHH
Confidence 2578999887 99999997643 3344444443 34566665432 367899999999999999999999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEE
Q psy1413 212 TLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 212 ~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+++||+.+.+++ ..|++++
T Consensus 350 ~~~A~~~~~~~~--~~k~~~~ 368 (368)
T cd08300 350 INEAFDLMHAGK--SIRTVVK 368 (368)
T ss_pred HHHHHHHHhCCC--CceeeeC
Confidence 999999998764 4677763
No 47
>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i
Probab=99.91 E-value=1.1e-23 Score=203.61 Aligned_cols=237 Identities=30% Similarity=0.456 Sum_probs=189.4
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.. ++.+.|.+.+..+++.+.++++++.++.+.. |.. ...++...|.++.|+|..+|...+.++.
T Consensus 14 ~~~~-~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~-g~~---~~~~p~i~G~e~~G~V~~vG~~v~~~~~--------- 79 (365)
T cd08277 14 PLVI-EEIEVAPPKANEVRIKMLATSVCHTDILAIE-GFK---ATLFPVILGHEGAGIVESVGEGVTNLKP--------- 79 (365)
T ss_pred CcEE-EEEECCCCCCCEEEEEEEEEeechhhHHHhc-CCC---CCCCCeecccceeEEEEeeCCCCccCCC---------
Confidence 3555 5567788888899999999999988776642 211 1234567899999999999975443444
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 80 -------------------------------------------------------------------------------G 80 (365)
T cd08277 80 -------------------------------------------------------------------------------G 80 (365)
T ss_pred -------------------------------------------------------------------------------C
Confidence 8
Q ss_pred CceeecCCCcccccccccCCccccccceeecccCC-------------------CCccceeEEeeccceeeeCCCCCCcc
Q psy1413 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP-------------------DHGNLSRYYRHAADFCHKLPDHVSLE 294 (408)
Q Consensus 234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------------~~g~~~~~~~~~~~~~~~~p~~~~~~ 294 (408)
|+|+..+..+|++|.+|.++.++.|++......+. ..|+|++|+.++++.++++|++++++
T Consensus 81 drV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~~~ 160 (365)
T cd08277 81 DKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAPLE 160 (365)
T ss_pred CEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCCHH
Confidence 99988888899999999999999998754321110 25899999999999999999999999
Q ss_pred cccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC
Q psy1413 295 EGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH 372 (408)
Q Consensus 295 ~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~ 372 (408)
++++++ .+.++++++ +...++++++++|+|+|++|+.++|+++.+|+.+|++++++++|++.++++|++.+++.++.
T Consensus 161 ~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~~~~ga~~~i~~~~~- 239 (365)
T cd08277 161 HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKAKEFGATDFINPKDS- 239 (365)
T ss_pred HhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCCcEeccccc-
Confidence 888877 567788776 66788999999999889999999999999999779999999999999999999999987541
Q ss_pred ChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413 373 SLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
..++.+.+++++. +++|++|||+|....++.+
T Consensus 240 -~~~~~~~~~~~~~-~g~d~vid~~g~~~~~~~~ 271 (365)
T cd08277 240 -DKPVSEVIREMTG-GGVDYSFECTGNADLMNEA 271 (365)
T ss_pred -cchHHHHHHHHhC-CCCCEEEECCCChHHHHHH
Confidence 1245667777776 6899999999976665543
No 48
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.91 E-value=4.9e-24 Score=208.99 Aligned_cols=234 Identities=18% Similarity=0.197 Sum_probs=161.0
Q ss_pred CCeeeecccchhhhhcCCC-CCC---CCCCCccccCCccEEEEEeCCCCC-CCCCCCEEEEccCccc-------------
Q psy1413 1 MHCVGICGSDVHYLTHGQI-GDF---RLSDPMIVGHEASGIVSKVGAKVK-HLKVDNQTRFVPEFRN------------- 62 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~-~~~---~~~~P~i~GhE~~G~Vv~vG~~v~-~~~vGdrV~~~~~~~~------------- 62 (408)
|+++|||++|++.+..|.. +.. ..++|.++|||++|+|+++|++|+ +|++||||++.+...+
T Consensus 33 V~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~ 112 (410)
T cd08238 33 VISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTY 112 (410)
T ss_pred EEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccC
Confidence 4689999999997644421 110 124789999999999999999998 6999999987653221
Q ss_pred ---------ccCC----cceeccceeeecccccCCCCCCc---ceEEEE--------eeeee-cCCeEEEEc-cCccccc
Q psy1413 63 ---------VCLS----PILRRRFSLRFREQKPIEDPDDH---EVLLEM--------HCVGI-CGSDVHYLT-HGQIGDF 116 (408)
Q Consensus 63 ---------~~~~----~~~~~p~~~~~~~~~~lp~~~~~---~~~~~~--------~~~~~-~g~~vlv~g-~G~vG~~ 116 (408)
.+.+ .++..|++++++ .+++.+++.. ++.+.. ....+ .+++++|+| +|++|++
T Consensus 113 ~G~~aey~~v~~~~~~~~~~~lP~~l~~~-~aal~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~ 191 (410)
T cd08238 113 PGGLATYHIIPNEVMEQDCLLIYEGDGYA-EASLVEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLM 191 (410)
T ss_pred CCcceEEEEecHHhccCCeEECCCCCCHH-HHhhcchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHH
Confidence 1111 234445555542 2222212111 110000 11222 468899997 7999999
Q ss_pred cccccccccC---c----------------------------------------------------ceeEEEccCchH--
Q psy1413 117 RLSDPMIVGH---E----------------------------------------------------ASGIVSKVGAKV-- 139 (408)
Q Consensus 117 ~i~~a~~~G~---~----------------------------------------------------~~~vv~~~g~~~-- 139 (408)
++|+++.+|. . ++.+++++|...
T Consensus 192 aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~ 271 (410)
T cd08238 192 AIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELV 271 (410)
T ss_pred HHHHHHhcccCCceEEEEcCCHHHHHHHHHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHH
Confidence 9888877542 0 011222222211
Q ss_pred -HHHhhccCCcEEEEEccC-CC--CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHH
Q psy1413 140 -KHLKATRPGGCLVIVGAG-SQ--DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLH 214 (408)
Q Consensus 140 -~~~~~l~~gG~iv~~G~~-~~--~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~ 214 (408)
+++++++++|+++.++.. .. +.++++..++++++++.|++..+ .+++++++++++|++++.++++|+|||+|+++
T Consensus 272 ~~a~~~l~~~G~~v~~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~ 351 (410)
T cd08238 272 EEADTLLAPDGCLNFFAGPVDKNFSAPLNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAE 351 (410)
T ss_pred HHHHHHhccCCeEEEEEccCCCCccccccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHH
Confidence 568999999988877543 22 35678888999999999998765 78999999999999999999999999999999
Q ss_pred HHHHHHcCCCCceEEEEEcCcee
Q psy1413 215 AFETAKTGAGNAIKVMIHCDRVA 237 (408)
Q Consensus 215 a~~~~~~~~~~~~kvvi~~~~v~ 237 (408)
||+.+. ++ ..+|+++..+++.
T Consensus 352 A~~~~~-~~-~~gKvvl~~~~~~ 372 (410)
T cd08238 352 TTLNLP-GI-PGGKKLIYTQKPL 372 (410)
T ss_pred HHHHhh-cc-CCceEEEECCCCC
Confidence 999999 43 5689999887763
No 49
>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase. (2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.
Probab=99.90 E-value=8.7e-24 Score=203.36 Aligned_cols=229 Identities=25% Similarity=0.345 Sum_probs=168.6
Q ss_pred CCeeeecccchhhhhcCCCCCC--------CCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-----------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDF--------RLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR----------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~--------~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~----------- 61 (408)
+.++|+|++|++.+..+..... ...+|.++|||++|+|+++|++|+.+++||+|...+...
T Consensus 31 v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~ 110 (351)
T cd08233 31 VAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGL 110 (351)
T ss_pred EEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcC
Confidence 4689999999987643321100 123689999999999999999999999999998643211
Q ss_pred -----------------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccc
Q psy1413 62 -----------------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFR 117 (408)
Q Consensus 62 -----------------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~ 117 (408)
..+...++..|+++++++. ....+..+++.+. ....+ .+++++|+|+|++|+++
T Consensus 111 ~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~lP~~~~~~~a-a~~~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a 188 (351)
T cd08233 111 YNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKLPDNVPLEEA-ALVEPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLT 188 (351)
T ss_pred cccCCCCceeccCCCCCceeeEEEechHHeEECcCCCCHHHh-hhccHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHH
Confidence 1222334444555554222 2222222222111 11112 47889999999999999
Q ss_pred ccccccccC-------------------------------------------cceeEEEccCch---HHHHhhccCCcEE
Q psy1413 118 LSDPMIVGH-------------------------------------------EASGIVSKVGAK---VKHLKATRPGGCL 151 (408)
Q Consensus 118 i~~a~~~G~-------------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~i 151 (408)
+|+++.+|+ .++.+++++|.. .+.+++++++|++
T Consensus 189 ~q~a~~~G~~~v~~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~ 268 (351)
T cd08233 189 ILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTA 268 (351)
T ss_pred HHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEECCCccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEE
Confidence 888887665 145566666532 2678999999999
Q ss_pred EEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchH-HHHHHHHHcCCCCceEE
Q psy1413 152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDT-LHAFETAKTGAGNAIKV 229 (408)
Q Consensus 152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~-~~a~~~~~~~~~~~~kv 229 (408)
+.+|....+.+++...++.+++++.+.+... .+++++++++++++++++++++++|+|+|+ ++||+.+.+++...+|+
T Consensus 269 v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~ 348 (351)
T cd08233 269 VNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKI 348 (351)
T ss_pred EEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEE
Confidence 9999877777888888999999999998775 889999999999999988999999999996 79999999998767888
Q ss_pred EE
Q psy1413 230 MI 231 (408)
Q Consensus 230 vi 231 (408)
++
T Consensus 349 v~ 350 (351)
T cd08233 349 LV 350 (351)
T ss_pred Ee
Confidence 86
No 50
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.90 E-value=1.1e-22 Score=197.07 Aligned_cols=237 Identities=30% Similarity=0.422 Sum_probs=187.6
Q ss_pred ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413 73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV 152 (408)
Q Consensus 73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv 152 (408)
..+.. ++.++|.+.+..+++.+..+++++.++.+.- |.. ........|.++.|++..+|...+.++.
T Consensus 18 ~~~~l-~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~-g~~---~~~~p~v~G~e~~G~V~~vG~~v~~~~~-------- 84 (373)
T cd08299 18 KPFSI-EEIEVAPPKAHEVRIKIVATGICRSDDHVVS-GKL---VTPFPVILGHEAAGIVESVGEGVTTVKP-------- 84 (373)
T ss_pred CCcEE-EEeecCCCCCCEEEEEEEEEEcCcccHHHhc-CCC---CCCCCccccccceEEEEEeCCCCccCCC--------
Confidence 34555 5667777778888999999999988876642 222 1234557899999999999965433333
Q ss_pred EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
T Consensus 85 -------------------------------------------------------------------------------- 84 (373)
T cd08299 85 -------------------------------------------------------------------------------- 84 (373)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceeecCCCcccccccccCCccccccceeeccc--------------------CCCCccceeEEeeccceeeeCCCCCC
Q psy1413 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT--------------------PPDHGNLSRYYRHAADFCHKLPDHVS 292 (408)
Q Consensus 233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~g~~~~~~~~~~~~~~~~p~~~~ 292 (408)
+|+|+..+..+|++|.+|.+++++.|+.....+. ....|+|++|..++++.++++|++++
T Consensus 85 Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~ 164 (373)
T cd08299 85 GDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAP 164 (373)
T ss_pred CCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCC
Confidence 8999888888999999999999999986543210 00258999999999999999999999
Q ss_pred cccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413 293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR 370 (408)
Q Consensus 293 ~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~ 370 (408)
+++++.++ .+.++++++ ....++++++++|+|+|++|++++++++.+|+++|+++++++++++.++++|++.+++..+
T Consensus 165 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~ 244 (373)
T cd08299 165 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQD 244 (373)
T ss_pred hHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccc
Confidence 98888877 667788775 6678899999999977999999999999999977999999999999999999999998754
Q ss_pred CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413 371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405 (408)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~ 405 (408)
. .++..+.+.++++ +++|.++||+|+...+..
T Consensus 245 ~--~~~~~~~v~~~~~-~~~d~vld~~g~~~~~~~ 276 (373)
T cd08299 245 Y--KKPIQEVLTEMTD-GGVDFSFEVIGRLDTMKA 276 (373)
T ss_pred c--chhHHHHHHHHhC-CCCeEEEECCCCcHHHHH
Confidence 1 1235666777775 589999999997655443
No 51
>cd08230 glucose_DH Glucose dehydrogenase. Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai
Probab=99.90 E-value=9.2e-23 Score=196.49 Aligned_cols=230 Identities=29% Similarity=0.461 Sum_probs=175.1
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccc-cccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF-RLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~-~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
+.+ +..++|.+.+.++++.+.++++++.++.+.- |..... ........|+|+.|+|..+|+. +.++.
T Consensus 13 l~~-~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~-g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~v--------- 80 (355)
T cd08230 13 VRV-VDIPEPEPTPGEVLVRTLEVGVCGTDREIVA-GEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSP--------- 80 (355)
T ss_pred CeE-EeCCCCCCCCCeEEEEEEEEEeccccHHHHc-CCCCCCCCCCCCeeeccccceEEEEecCC-CCCCC---------
Confidence 666 5678888889999999999999988876642 111110 1123456899999999999976 54554
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 81 -------------------------------------------------------------------------------G 81 (355)
T cd08230 81 -------------------------------------------------------------------------------G 81 (355)
T ss_pred -------------------------------------------------------------------------------C
Confidence 9
Q ss_pred CceeecCCCcccccccccCCccccccceeec--ccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhh--
Q psy1413 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC--ATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC-- 309 (408)
Q Consensus 234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~-- 309 (408)
|+|...+..+|+.|..|..|+++.|+....+ |....+|+|++|+.++++.++++|++++ +.+++..++++++.++
T Consensus 82 drV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~P~~~~-~~a~~~~p~~~~~~a~~~ 160 (355)
T cd08230 82 DLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKVPPSLA-DVGVLLEPLSVVEKAIEQ 160 (355)
T ss_pred CEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEECCCCCC-cceeecchHHHHHHHHHH
Confidence 9999888889999999999999999876543 3323579999999999999999999999 5565555555544433
Q ss_pred -----hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEec---ChhhHHHHHHcCCCeEEecCCCCChHHHHHHH
Q psy1413 310 -----RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDI---LEHKLKTAKEMGADATVLIDRNHSLEEISTHI 381 (408)
Q Consensus 310 -----~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~---~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~ 381 (408)
+....+++++++|+|+|++|+.++|+|+.+|++ |+++++ +++|++.++++|++. +++.+ ++..+ .
T Consensus 161 ~~~~~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~-vi~~~~~~~~~~~~~~~~~~Ga~~-v~~~~----~~~~~-~ 233 (355)
T cd08230 161 AEAVQKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFE-VYVLNRRDPPDPKADIVEELGATY-VNSSK----TPVAE-V 233 (355)
T ss_pred HhhhhhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEecCCCCHHHHHHHHHcCCEE-ecCCc----cchhh-h
Confidence 122357899999998899999999999999996 888887 678899999999987 45544 33333 2
Q ss_pred HHHhcCCCCceEEEcccchhhhhhc
Q psy1413 382 IELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 382 ~~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
+ . ..++|++|||+|.+..++.+
T Consensus 234 ~-~--~~~~d~vid~~g~~~~~~~~ 255 (355)
T cd08230 234 K-L--VGEFDLIIEATGVPPLAFEA 255 (355)
T ss_pred h-h--cCCCCEEEECcCCHHHHHHH
Confidence 1 1 35899999999987665554
No 52
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.89 E-value=2e-22 Score=193.29 Aligned_cols=245 Identities=59% Similarity=1.024 Sum_probs=193.4
Q ss_pred ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 68 ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 68 ~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
++..++.+.+ +..+.|.+.+..+++++.+.+++..++.+...+..|......+...|.++.|++..+|.....++.
T Consensus 3 ~~~~~~~~~~-~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~--- 78 (343)
T cd05285 3 VLHGPGDLRL-EERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV--- 78 (343)
T ss_pred eEecCCceeE-EECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCC---
Confidence 4556667777 556777777888889999999987776554223333322233456789999999999864333333
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 79 -------------------------------------------------------------------------------- 78 (343)
T cd05285 79 -------------------------------------------------------------------------------- 78 (343)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhh
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVH 307 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~ 307 (408)
+++|...+..+|+.|..|..|.+++|++..+.+....+|+|++|+.++++.++++|++++.++++.+.++.++++
T Consensus 79 -----Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~ 153 (343)
T cd05285 79 -----GDRVAIEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALVEPLSVGVH 153 (343)
T ss_pred -----CCEEEEccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhhhHHHHHHH
Confidence 889988888999999999999999998765533333579999999999999999999999888887667778888
Q ss_pred hhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413 308 ACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387 (408)
Q Consensus 308 ~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~ 387 (408)
++....++++++++|+|+|++|+.++|+|+.+|+++|+++++++++.+.++++|++.++++++. +...+.+.+.+.+.+
T Consensus 154 ~~~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~~~~~~~~~~ 232 (343)
T cd05285 154 ACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAKELGATHTVNVRTE-DTPESAEKIAELLGG 232 (343)
T ss_pred HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEeccccc-cchhHHHHHHHHhCC
Confidence 8877889999999998779999999999999999878888888999999999999999988761 111136667777877
Q ss_pred CCCceEEEcccchhh
Q psy1413 388 EQPDKTIDCSGIEST 402 (408)
Q Consensus 388 ~~~d~i~d~~g~~~~ 402 (408)
+++|++|||+|+...
T Consensus 233 ~~~d~vld~~g~~~~ 247 (343)
T cd05285 233 KGPDVVIECTGAESC 247 (343)
T ss_pred CCCCEEEECCCCHHH
Confidence 889999999997633
No 53
>PLN02586 probable cinnamyl alcohol dehydrogenase
Probab=99.89 E-value=1.6e-22 Score=194.88 Aligned_cols=227 Identities=23% Similarity=0.384 Sum_probs=173.3
Q ss_pred ccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEEccCC
Q psy1413 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGS 158 (408)
Q Consensus 79 ~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~~ 158 (408)
...+.|.+.+.++++.+.++++++.++.+.- |..+ ....+..+|.|+.|+|..+|+..+.++.
T Consensus 28 ~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~-g~~~--~~~~p~i~GhE~~G~V~~vG~~v~~~~v-------------- 90 (360)
T PLN02586 28 FHFSRRENGDEDVTVKILYCGVCHSDLHTIK-NEWG--FTRYPIVPGHEIVGIVTKLGKNVKKFKE-------------- 90 (360)
T ss_pred EeecCCCCCCCeEEEEEEEecCChhhHhhhc-CCcC--CCCCCccCCcceeEEEEEECCCCCccCC--------------
Confidence 3445566778889999999999998887652 2222 1234667899999999999975444444
Q ss_pred CCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceee
Q psy1413 159 QDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAI 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~ 238 (408)
+|+|.+
T Consensus 91 --------------------------------------------------------------------------GdrV~~ 96 (360)
T PLN02586 91 --------------------------------------------------------------------------GDRVGV 96 (360)
T ss_pred --------------------------------------------------------------------------CCEEEE
Confidence 899976
Q ss_pred cCC-CcccccccccCCccccccceeeccc------CCCCccceeEEeeccceeeeCCCCCCcccccccch-hhhhhhhhh
Q psy1413 239 EPG-VPCRTCTYCKEGRYNLCRQIFFCAT------PPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEP-LSVGVHACR 310 (408)
Q Consensus 239 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~-~~~~~~~~~ 310 (408)
.+. .+|+.|.+|..|.+++|++..+... ...+|+|++|+.++++.++++|+++++++++++++ ..++++++.
T Consensus 97 ~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta~~al~ 176 (360)
T PLN02586 97 GVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMK 176 (360)
T ss_pred ccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcchHHHHHHHH
Confidence 554 5799999999999999998654311 12479999999999999999999999999887774 555677764
Q ss_pred c-cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhh-HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413 311 R-AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHK-LKTAKEMGADATVLIDRNHSLEEISTHIIELLQGE 388 (408)
Q Consensus 311 ~-~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~ 388 (408)
. ...+++++++|.|+|++|+.++|+++.+|++ +++++.++++ .+.++++|++.+++.++ . +.+++.++
T Consensus 177 ~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-vi~~~~~~~~~~~~~~~~Ga~~vi~~~~----~---~~~~~~~~-- 246 (360)
T PLN02586 177 YYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLK-VTVISSSSNKEDEAINRLGADSFLVSTD----P---EKMKAAIG-- 246 (360)
T ss_pred HhcccCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCcchhhhHHHhCCCcEEEcCCC----H---HHHHhhcC--
Confidence 3 4467899999988899999999999999997 6666666555 45668899999998654 2 23444442
Q ss_pred CCceEEEcccchhhhhhc
Q psy1413 389 QPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 389 ~~d~i~d~~g~~~~~~~~ 406 (408)
++|++||++|...+++.+
T Consensus 247 ~~D~vid~~g~~~~~~~~ 264 (360)
T PLN02586 247 TMDYIIDTVSAVHALGPL 264 (360)
T ss_pred CCCEEEECCCCHHHHHHH
Confidence 699999999987665544
No 54
>KOG1197|consensus
Probab=99.89 E-value=7.4e-24 Score=182.62 Aligned_cols=225 Identities=22% Similarity=0.256 Sum_probs=170.5
Q ss_pred CeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceecccee
Q psy1413 2 HCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFSL 75 (408)
Q Consensus 2 ~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~~ 75 (408)
++||+|.-|+..++ |-+. +.+.|.+||-|++|+|+++|++|+++++||||.... +....+...++.+|+.+
T Consensus 43 ka~GlNfid~y~Rk-GlY~--~~plPytpGmEaaGvVvAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~vpe~i 119 (336)
T KOG1197|consen 43 KACGLNFIDLYFRK-GLYD--PAPLPYTPGMEAAGVVVAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKVPEAI 119 (336)
T ss_pred hhcCccHHHHHHhc-cccC--CCCCCcCCCcccceEEEEecCCccccccccEEEEeccchhhheeccccceeeccCCccc
Confidence 58999999999874 4321 668899999999999999999999999999998533 33456666777788888
Q ss_pred eecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccC---------------------------
Q psy1413 76 RFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH--------------------------- 126 (408)
Q Consensus 76 ~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~--------------------------- 126 (408)
.+.+++++.....+++.....+..+ +|++|+++. +|++|+...|++++.|+
T Consensus 120 ~~k~aaa~llq~lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~akenG~~h~I~y~ 199 (336)
T KOG1197|consen 120 TLKEAAALLLQGLTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAKENGAEHPIDYS 199 (336)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHHhcCCcceeecc
Confidence 8866666665566666444444444 488899965 99999999999887765
Q ss_pred ---------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEee-----cCCC
Q psy1413 127 ---------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVF-----RYAN 183 (408)
Q Consensus 127 ---------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~-----~~~~ 183 (408)
.++.+.+++|.+. .++.+|+++|+++.+|+... .-++++..+..|.+.+.... ..+.
T Consensus 200 ~eD~v~~V~kiTngKGVd~vyDsvG~dt~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~ 279 (336)
T KOG1197|consen 200 TEDYVDEVKKITNGKGVDAVYDSVGKDTFAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEV 279 (336)
T ss_pred chhHHHHHHhccCCCCceeeeccccchhhHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHH
Confidence 4667788888765 68999999999999998765 44566666666666665433 2222
Q ss_pred c----HHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 184 D----YPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 184 ~----~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
. ..+++.++.+|++++. |.|+|||+++.+|+.++++++. .+|+++.
T Consensus 280 el~~~v~rl~alvnsg~lk~~--I~~~ypls~vadA~~diesrkt-vGkvlLl 329 (336)
T KOG1197|consen 280 ELVSYVARLFALVNSGHLKIH--IDHVYPLSKVADAHADIESRKT-VGKVLLL 329 (336)
T ss_pred HHHHHHHHHHHHhhcCcccee--eeeecchHHHHHHHHHHHhhhc-cceEEEe
Confidence 2 3667788889988665 9999999999999999999765 4455544
No 55
>PLN02178 cinnamyl-alcohol dehydrogenase
Probab=99.89 E-value=1.9e-22 Score=195.00 Aligned_cols=231 Identities=23% Similarity=0.379 Sum_probs=174.9
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.. ...+.|.+.+.++++.+.++++++.++.+.. |... ...++..+|.|+.|+|..+|+..+.++.
T Consensus 18 ~l~~-~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~-G~~~--~~~~p~i~GhE~aG~Vv~vG~~v~~~~v--------- 84 (375)
T PLN02178 18 VLSP-FHFSRRENGENDVTVKILFCGVCHSDLHTIK-NHWG--FSRYPIIPGHEIVGIATKVGKNVTKFKE--------- 84 (375)
T ss_pred CceE-EeecCCCCCCCeEEEEEEEEcCchHHHHHhc-CCCC--CCCCCcccCceeeEEEEEECCCCCccCC---------
Confidence 3444 3445666778889999999999998877652 2111 1134567899999999999975444444
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 85 -------------------------------------------------------------------------------G 85 (375)
T PLN02178 85 -------------------------------------------------------------------------------G 85 (375)
T ss_pred -------------------------------------------------------------------------------C
Confidence 8
Q ss_pred CceeecCCC-cccccccccCCccccccceeeccc------CCCCccceeEEeeccceeeeCCCCCCcccccccch-hhhh
Q psy1413 234 DRVAIEPGV-PCRTCTYCKEGRYNLCRQIFFCAT------PPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEP-LSVG 305 (408)
Q Consensus 234 ~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~-~~~~ 305 (408)
|+|.+.+.. +|+.|.+|..|++++|++..+... ...+|+|++|+.++++.++++|+++++++++++++ ..++
T Consensus 86 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~ta 165 (375)
T PLN02178 86 DRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITV 165 (375)
T ss_pred CEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccchHH
Confidence 999866654 699999999999999998643211 12369999999999999999999999998887774 4456
Q ss_pred hhhhhccC--cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChh-hHHHHHHcCCCeEEecCCCCChHHHHHHHH
Q psy1413 306 VHACRRAG--VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEH-KLKTAKEMGADATVLIDRNHSLEEISTHII 382 (408)
Q Consensus 306 ~~~~~~~~--~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~ 382 (408)
++++.... .+++++++|.|+|++|+.++|+|+.+|++ |++++++++ +.+.++++|+++++++++ . +.++
T Consensus 166 ~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~-Vi~~~~~~~~~~~~a~~lGa~~~i~~~~----~---~~v~ 237 (375)
T PLN02178 166 YSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLR-VTVISRSSEKEREAIDRLGADSFLVTTD----S---QKMK 237 (375)
T ss_pred HHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCe-EEEEeCChHHhHHHHHhCCCcEEEcCcC----H---HHHH
Confidence 66664433 36899999998899999999999999997 777776654 467788999999998654 2 3445
Q ss_pred HHhcCCCCceEEEcccchhhhhhc
Q psy1413 383 ELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 383 ~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
+.+. ++|++|||+|...+++.+
T Consensus 238 ~~~~--~~D~vid~~G~~~~~~~~ 259 (375)
T PLN02178 238 EAVG--TMDFIIDTVSAEHALLPL 259 (375)
T ss_pred HhhC--CCcEEEECCCcHHHHHHH
Confidence 5552 699999999987665544
No 56
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.89 E-value=3.9e-22 Score=192.62 Aligned_cols=239 Identities=31% Similarity=0.493 Sum_probs=190.0
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHH------HhhccC
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH------LKATRP 147 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~------~~~l~~ 147 (408)
.+.+ +..++|.+.+.++++.+.++++++.++.+. .|.... ...+..+|.++.|+|..+|+.... ++.
T Consensus 12 ~l~~-~~~~~p~~~~~evlV~v~a~~l~~~d~~~~-~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~--- 84 (361)
T cd08231 12 PLEI-REVPLPDLEPGAVLVRVRLAGVCGSDVHTV-AGRRPR--VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKV--- 84 (361)
T ss_pred CCEE-EeccCCCCCCCeEEEEEEEEeecCccHHHh-cCCCCC--CCCCcccccCCceEEEEeCCCccccccCCccCC---
Confidence 5666 566778888889999999999988776553 121110 234567899999999999975322 333
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 85 -------------------------------------------------------------------------------- 84 (361)
T cd08231 85 -------------------------------------------------------------------------------- 84 (361)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeecccCC------CCccceeEEeeccc-eeeeCCCCCCcccccccc
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP------DHGNLSRYYRHAAD-FCHKLPDHVSLEEGALLE 300 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa~~~ 300 (408)
+|+|...+..+|+.|..|..+.++.|.+..+.+... ..|+|++|+.++++ .++++|++++.++++.++
T Consensus 85 -----Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~ 159 (361)
T cd08231 85 -----GDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPAN 159 (361)
T ss_pred -----CCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhc
Confidence 899998888899999999999999999887766532 36999999999996 799999999988888774
Q ss_pred -hhhhhhhhhhccC-cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHH
Q psy1413 301 -PLSVGVHACRRAG-VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS 378 (408)
Q Consensus 301 -~~~~~~~~~~~~~-~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~ 378 (408)
++.|+++++.... .++++++||+|+|++|++++|+|+.+|+++|+++++++++.+.++++|++.++++++. +..+..
T Consensus 160 ~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~-~~~~~~ 238 (361)
T cd08231 160 CALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDEL-PDPQRR 238 (361)
T ss_pred CHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCccc-ccHHHH
Confidence 7788888885543 4589999999889999999999999999669999999999999999999999987652 123345
Q ss_pred HHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413 379 THIIELLQGEQPDKTIDCSGIESTIKL 405 (408)
Q Consensus 379 ~~~~~~~~~~~~d~i~d~~g~~~~~~~ 405 (408)
+.++++++++++|++|||+|+......
T Consensus 239 ~~i~~~~~~~~~d~vid~~g~~~~~~~ 265 (361)
T cd08231 239 AIVRDITGGRGADVVIEASGHPAAVPE 265 (361)
T ss_pred HHHHHHhCCCCCcEEEECCCChHHHHH
Confidence 678888888899999999987554443
No 57
>PRK10083 putative oxidoreductase; Provisional
Probab=99.89 E-value=1.2e-22 Score=194.55 Aligned_cols=229 Identities=20% Similarity=0.244 Sum_probs=163.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR------------------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~------------------- 61 (408)
|.++|||++|++.+. |..+ ..++|.++|||++|+|+++|++|+.+++||+|++.+...
T Consensus 31 v~~~gi~~~d~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (339)
T PRK10083 31 VKLAGICGSDSHIYR-GHNP--FAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLV 107 (339)
T ss_pred EEEEEEcccchHHHc-CCCC--cCCCCcccccceEEEEEEECCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCc
Confidence 468999999999874 3321 125689999999999999999999999999998644222
Q ss_pred --------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccc-cc
Q psy1413 62 --------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMI-VG 125 (408)
Q Consensus 62 --------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~-~G 125 (408)
..+...++..|++++++. +.+..++.+++. ......+ .+++++|+|+|++|++++++++. +|
T Consensus 108 ~~~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~-a~~~~~~~~a~~-~~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G 185 (339)
T PRK10083 108 VLGVHRDGGFSEYAVVPAKNAHRIPDAIADQY-AVMVEPFTIAAN-VTGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYN 185 (339)
T ss_pred eEEEccCCcceeeEEechHHeEECcCCCCHHH-HhhhchHHHHHH-HHHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCC
Confidence 122223333444444321 222222222221 0011112 47889999999999999998885 46
Q ss_pred Cc-----------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCc
Q psy1413 126 HE-----------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDV 161 (408)
Q Consensus 126 ~~-----------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~ 161 (408)
+. ++.+++++|.. .+++++++++|+++.+|......
T Consensus 186 ~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~~~~~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 265 (339)
T PRK10083 186 VKAVIVADRIDERLALAKESGADWVINNAQEPLGEALEEKGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEPS 265 (339)
T ss_pred CCEEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCc
Confidence 51 12456666632 26789999999999999765555
Q ss_pred ccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 162 KIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 162 ~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
.++...+..+++++.+.....+.+++++++++++++++.++++++|+++++++|++.+.+++...+|+++++.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~ 338 (339)
T PRK10083 266 EIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFA 338 (339)
T ss_pred eecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecC
Confidence 5555566678899888876567899999999999999877889999999999999999877666788888764
No 58
>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH). This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino
Probab=99.88 E-value=1.5e-22 Score=195.44 Aligned_cols=227 Identities=26% Similarity=0.387 Sum_probs=163.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCC------CCCCCEEEEccCccc------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH------LKVDNQTRFVPEFRN------------ 62 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~------~~vGdrV~~~~~~~~------------ 62 (408)
|.++|||++|++.+. |..+. ..+|.++|||++|+|+++|++|+. |++||+|+..+.+.+
T Consensus 32 v~a~~l~~~d~~~~~-g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~ 108 (361)
T cd08231 32 VRLAGVCGSDVHTVA-GRRPR--VPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPT 108 (361)
T ss_pred EEEEeecCccHHHhc-CCCCC--CCCCcccccCCceEEEEeCCCccccccCCccCCCCEEEEcccCCCCCChhHhCcCcc
Confidence 468999999999884 43221 467899999999999999999986 999999987643211
Q ss_pred ----------------------------ccCC-cceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCc
Q psy1413 63 ----------------------------VCLS-PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQ 112 (408)
Q Consensus 63 ----------------------------~~~~-~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~ 112 (408)
.+.. .++..|+++++++.+.++.++.+++.+....... .+++++|.|+|+
T Consensus 109 ~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~ 188 (361)
T cd08231 109 KCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGP 188 (361)
T ss_pred ccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH
Confidence 1111 3444455444433333333433333221111222 578899999999
Q ss_pred cccccccccccccC-c---------------------------------------------ceeEEEccCch---HHHHh
Q psy1413 113 IGDFRLSDPMIVGH-E---------------------------------------------ASGIVSKVGAK---VKHLK 143 (408)
Q Consensus 113 vG~~~i~~a~~~G~-~---------------------------------------------~~~vv~~~g~~---~~~~~ 143 (408)
+|++++++++.+|+ . ++.+++++|.. .++++
T Consensus 189 vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~ 268 (361)
T cd08231 189 LGLYAVAAAKLAGARRVIVIDGSPERLELAREFGADATIDIDELPDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLE 268 (361)
T ss_pred HHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCCeEEcCcccccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHH
Confidence 99999888887775 2 23344454432 26789
Q ss_pred hccCCcEEEEEccCCC--CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcC--CCCCCCceeeeeccchHHHHHHH
Q psy1413 144 ATRPGGCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASG--KVDVKKLITHNYLLEDTLHAFET 218 (408)
Q Consensus 144 ~l~~gG~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g--~~~~~~~i~~~~~l~~~~~a~~~ 218 (408)
+++++|+++.+|.... ..+++...++++++++.+.+..+ ++++++++++.++ +++++++++++|+++|+++||+.
T Consensus 269 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~ 348 (361)
T cd08231 269 LLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALEL 348 (361)
T ss_pred HhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHH
Confidence 9999999999997643 44566667899999999998765 7899999999998 67788899999999999999999
Q ss_pred HHcCCCCceEEEEE
Q psy1413 219 AKTGAGNAIKVMIH 232 (408)
Q Consensus 219 ~~~~~~~~~kvvi~ 232 (408)
+.+++ .+|+++.
T Consensus 349 ~~~~~--~~k~vi~ 360 (361)
T cd08231 349 AESGT--ALKVVID 360 (361)
T ss_pred HHcCC--ceEEEeC
Confidence 98865 3688775
No 59
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.88 E-value=8.8e-22 Score=189.42 Aligned_cols=242 Identities=27% Similarity=0.399 Sum_probs=189.8
Q ss_pred eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCC
Q psy1413 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPG 148 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~g 148 (408)
+..+..+.+ +..++|.+.+..+++.+.++++++.++.+.- |... ........|.++.|.+..+|+..+.++.
T Consensus 6 ~~~~~~~~l-~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~-g~~~--~~~~~~~~G~e~~G~V~~vG~~v~~~~~---- 77 (351)
T cd08285 6 MLGIGKVGW-IEKPIPVCGPNDAIVRPTAVAPCTSDVHTVW-GGAP--GERHGMILGHEAVGVVEEVGSEVKDFKP---- 77 (351)
T ss_pred EccCCccEE-EECCCCCCCCCeEEEEEEEEEechhhHHHhc-CCCC--CCCCCcccCcceEEEEEEecCCcCccCC----
Confidence 334444555 4556666677888899999999887765532 1111 1233567899999999999865433333
Q ss_pred cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceE
Q psy1413 149 GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIK 228 (408)
Q Consensus 149 G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~k 228 (408)
T Consensus 78 -------------------------------------------------------------------------------- 77 (351)
T cd08285 78 -------------------------------------------------------------------------------- 77 (351)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCceeecCCCcccccccccCCcccccccee-ecc-cCCCCccceeEEeeccc--eeeeCCCCCCcccccccc-hhh
Q psy1413 229 VMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF-FCA-TPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-PLS 303 (408)
Q Consensus 229 vvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~~~ 303 (408)
+|+|...+..+|+.|..|..|+++.|.+.. .+. ....+|+|++|+.++.+ .++++|++++.++++.++ ++.
T Consensus 78 ----Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ 153 (351)
T cd08285 78 ----GDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMS 153 (351)
T ss_pred ----CCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchh
Confidence 899988777789999999999999998742 111 12347999999999974 899999999998888775 677
Q ss_pred hhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413 304 VGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE 383 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~ 383 (408)
++++++....+++++++||+|+|++|+.++|+++.+|+.+++++++++++.+.++++|++.++++++ .+..+.+.+
T Consensus 154 ta~~~~~~~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~----~~~~~~i~~ 229 (351)
T cd08285 154 TGFHGAELANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKN----GDVVEQILK 229 (351)
T ss_pred hHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCC----CCHHHHHHH
Confidence 8888887788999999999977999999999999999987999999999999999999999999876 556667777
Q ss_pred HhcCCCCceEEEcccchhhhhhc
Q psy1413 384 LLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 384 ~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
++.++++|++|||+|+...+..+
T Consensus 230 ~~~~~~~d~vld~~g~~~~~~~~ 252 (351)
T cd08285 230 LTGGKGVDAVIIAGGGQDTFEQA 252 (351)
T ss_pred HhCCCCCcEEEECCCCHHHHHHH
Confidence 77778899999999986555443
No 60
>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.
Probab=99.88 E-value=4.6e-22 Score=189.40 Aligned_cols=226 Identities=26% Similarity=0.357 Sum_probs=182.6
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.+ +..+.|.+.+.++++.+.++++++.++.+. .|... .......+|.++.|++..+|+..+.++.
T Consensus 14 ~l~~-~~~p~P~~~~~evlVkv~~~gi~~~D~~~~-~g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~--------- 80 (329)
T TIGR02822 14 PLRF-VERPVPRPGPGELLVRVRACGVCRTDLHVS-EGDLP--VHRPRVTPGHEVVGEVAGRGADAGGFAV--------- 80 (329)
T ss_pred CceE-EeCCCCCCCCCeEEEEEEEEeecchhHHHH-cCCCC--CCCCCccCCcceEEEEEEECCCCcccCC---------
Confidence 4666 567888888899999999999998876654 22211 1122456799999999999975444444
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 81 -------------------------------------------------------------------------------G 81 (329)
T TIGR02822 81 -------------------------------------------------------------------------------G 81 (329)
T ss_pred -------------------------------------------------------------------------------C
Confidence 8
Q ss_pred CceeecCC-CcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413 234 DRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR 311 (408)
Q Consensus 234 ~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~ 311 (408)
|+|.+.+. .+|+.|..|..|++++|++..+.|. ..+|+|++|+.++++.++++|+++++++++.+. ...++++++.+
T Consensus 82 d~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~-~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~ 160 (329)
T TIGR02822 82 DRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGW-DTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR 160 (329)
T ss_pred CEEEEcCccCcCCCChHHhCcCcccCCCcccCCc-ccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh
Confidence 99987665 4799999999999999998776664 357999999999999999999999988887665 66778888877
Q ss_pred cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413 312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391 (408)
Q Consensus 312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d 391 (408)
..+++++++||+|+|++|++++|+++.+|++ |++++++++|++.++++|+++++++.+ . ..+++|
T Consensus 161 ~~~~~g~~VlV~G~g~iG~~a~~~a~~~G~~-vi~~~~~~~~~~~a~~~Ga~~vi~~~~----~----------~~~~~d 225 (329)
T TIGR02822 161 ASLPPGGRLGLYGFGGSAHLTAQVALAQGAT-VHVMTRGAAARRLALALGAASAGGAYD----T----------PPEPLD 225 (329)
T ss_pred cCCCCCCEEEEEcCCHHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHhCCceeccccc----c----------Ccccce
Confidence 8899999999999999999999999999997 888999999999999999999988533 1 023689
Q ss_pred eEEEcccchhhhhhcC
Q psy1413 392 KTIDCSGIESTIKLGM 407 (408)
Q Consensus 392 ~i~d~~g~~~~~~~~~ 407 (408)
.++++++...+++.++
T Consensus 226 ~~i~~~~~~~~~~~~~ 241 (329)
T TIGR02822 226 AAILFAPAGGLVPPAL 241 (329)
T ss_pred EEEECCCcHHHHHHHH
Confidence 9999888777766543
No 61
>PRK10083 putative oxidoreductase; Provisional
Probab=99.88 E-value=1.1e-21 Score=187.96 Aligned_cols=239 Identities=29% Similarity=0.536 Sum_probs=188.1
Q ss_pred eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCC
Q psy1413 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPG 148 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~g 148 (408)
+..|+.+.+ ++.+.|.+.+..+++.+.++++++.++...- |... ...+...+|.++.|++..+|+....++.
T Consensus 6 ~~~~~~~~~-~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~-g~~~--~~~~p~i~G~e~~G~V~~vG~~v~~~~~---- 77 (339)
T PRK10083 6 IEKPNSLAI-EERPIPQPAAGEVRVKVKLAGICGSDSHIYR-GHNP--FAKYPRVIGHEFFGVIDAVGEGVDAARI---- 77 (339)
T ss_pred EecCCeeEE-EeccCCCCCCCeEEEEEEEEEEcccchHHHc-CCCC--cCCCCcccccceEEEEEEECCCCccCCC----
Confidence 445666777 5667788888889999999999887765531 2111 1124567899999999999975433443
Q ss_pred cEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceE
Q psy1413 149 GCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIK 228 (408)
Q Consensus 149 G~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~k 228 (408)
T Consensus 78 -------------------------------------------------------------------------------- 77 (339)
T PRK10083 78 -------------------------------------------------------------------------------- 77 (339)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhh
Q psy1413 229 VMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHA 308 (408)
Q Consensus 229 vvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~ 308 (408)
+|+|.+.+..+|+.|..|.++++++|....+.+.. .+|+|++|+.++++.++++|++++.+.++...++.+++..
T Consensus 78 ----Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~ip~~~~~~~a~~~~~~~~a~~~ 152 (339)
T PRK10083 78 ----GERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVH-RDGGFSEYAVVPAKNAHRIPDAIADQYAVMVEPFTIAANV 152 (339)
T ss_pred ----CCEEEEccccCCCCCccccCcCcccCCCCceEEEc-cCCcceeeEEechHHeEECcCCCCHHHHhhhchHHHHHHH
Confidence 89999999999999999999999999876554432 4699999999999999999999998877755567777766
Q ss_pred hhccCcCCCCEEEEEecchhHHHHHHHHHH-hCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413 309 CRRAGVTLGSKVLITGAGPIGLVTLLTARA-LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387 (408)
Q Consensus 309 ~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~-~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~ 387 (408)
.....++++++++|+|+|++|++++|+++. +|++.+++++++++|.+.++++|++.++++++ .++.+.+.. .+
T Consensus 153 ~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~~~Ga~~~i~~~~----~~~~~~~~~--~g 226 (339)
T PRK10083 153 TGRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAKESGADWVINNAQ----EPLGEALEE--KG 226 (339)
T ss_pred HHhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc----ccHHHHHhc--CC
Confidence 677788999999999999999999999996 69988888999999999999999999998765 445555532 13
Q ss_pred CCCceEEEcccchhhhhhc
Q psy1413 388 EQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 388 ~~~d~i~d~~g~~~~~~~~ 406 (408)
.++|++||++|....++.+
T Consensus 227 ~~~d~vid~~g~~~~~~~~ 245 (339)
T PRK10083 227 IKPTLIIDAACHPSILEEA 245 (339)
T ss_pred CCCCEEEECCCCHHHHHHH
Confidence 3567999999976555543
No 62
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.88 E-value=2.4e-21 Score=186.37 Aligned_cols=242 Identities=30% Similarity=0.572 Sum_probs=191.5
Q ss_pred eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCcccccc-------ccccccccCcceeEEEccCchHH-
Q psy1413 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFR-------LSDPMIVGHEASGIVSKVGAKVK- 140 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~-------i~~a~~~G~~~~~vv~~~g~~~~- 140 (408)
+..|..+.+ +..+.|.+.+..+++.+.+++++..++.+.- |...... ...+..+|.++.|++..+|...+
T Consensus 6 ~~~~~~~~~-~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~-g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~ 83 (350)
T cd08256 6 CHGPQDYRL-EEVPVPRPGPGEILVKVEACGICAGDIKCYH-GAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEE 83 (350)
T ss_pred EecCCceEE-EECCCCCCCCCeEEEEEEEEEEcccchhhhc-CCCccccccccCccCCCCcccCcceeEEEEEeCCCccc
Confidence 344556667 5667777888888999999999888776542 2110000 12344679999999999996533
Q ss_pred -HHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHH
Q psy1413 141 -HLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETA 219 (408)
Q Consensus 141 -~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~ 219 (408)
.++.
T Consensus 84 ~~~~~--------------------------------------------------------------------------- 88 (350)
T cd08256 84 RGVKV--------------------------------------------------------------------------- 88 (350)
T ss_pred CCCCC---------------------------------------------------------------------------
Confidence 3343
Q ss_pred HcCCCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccC-CCCccceeEEeeccc-eeeeCCCCCCccccc
Q psy1413 220 KTGAGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATP-PDHGNLSRYYRHAAD-FCHKLPDHVSLEEGA 297 (408)
Q Consensus 220 ~~~~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~-~~~~~p~~~~~~~aa 297 (408)
+++|...+..+|+.|..|..+.++.|+....+|.. ...|+|++|+.++++ .++++|++++++.++
T Consensus 89 -------------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa 155 (350)
T cd08256 89 -------------GDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAI 155 (350)
T ss_pred -------------CCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHh
Confidence 89999888899999999999999999876554442 246999999999988 578999999988877
Q ss_pred ccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHH
Q psy1413 298 LLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEI 377 (408)
Q Consensus 298 ~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~ 377 (408)
.+.++.++++++....++++++++|.|+|++|+.++|+++.+|++.++++++++++.+.++++|++.+++.+. .+.
T Consensus 156 ~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~----~~~ 231 (350)
T cd08256 156 LIEPLACALHAVDRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPE----VDV 231 (350)
T ss_pred hhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCC----cCH
Confidence 6667778888887778899999999555999999999999999988888889999999999999999988765 566
Q ss_pred HHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413 378 STHIIELLQGEQPDKTIDCSGIESTIK 404 (408)
Q Consensus 378 ~~~~~~~~~~~~~d~i~d~~g~~~~~~ 404 (408)
.+.+.+.++++++|++||++|+...+.
T Consensus 232 ~~~~~~~~~~~~vdvvld~~g~~~~~~ 258 (350)
T cd08256 232 VEKIKELTGGYGCDIYIEATGHPSAVE 258 (350)
T ss_pred HHHHHHHhCCCCCCEEEECCCChHHHH
Confidence 667778887788999999999654443
No 63
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.88 E-value=1.7e-21 Score=188.41 Aligned_cols=244 Identities=50% Similarity=0.901 Sum_probs=184.8
Q ss_pred ccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcE
Q psy1413 71 RRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGC 150 (408)
Q Consensus 71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~ 150 (408)
.+..+.+ +..+.|.+.+..+++.+.+++++..++.+.-....+......+..+|.++.|++..+|+....++.
T Consensus 25 ~~~~l~~-~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~------ 97 (364)
T PLN02702 25 GVNTLKI-QPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVV------ 97 (364)
T ss_pred cCCceEE-EeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCC------
Confidence 4455555 445556667788889999999988776654211112222223456799999999998864332333
Q ss_pred EEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413 151 LVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM 230 (408)
Q Consensus 151 iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv 230 (408)
T Consensus 98 -------------------------------------------------------------------------------- 97 (364)
T PLN02702 98 -------------------------------------------------------------------------------- 97 (364)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhh
Q psy1413 231 IHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACR 310 (408)
Q Consensus 231 i~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~ 310 (408)
+|+|+..+..+|++|..|..|..+.|++..+++....+|+|++|+.++++.++++|+++++++++...+++++++++.
T Consensus 98 --Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~~~~~~a~~~~~ 175 (364)
T PLN02702 98 --GDRVALEPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKLPENVSLEEGAMCEPLSVGVHACR 175 (364)
T ss_pred --CCEEEEcCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEECCCCCCHHHHhhhhHHHHHHHHHH
Confidence 899998888899999999999999998755455444579999999999999999999999888876455666777776
Q ss_pred ccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH--hcCC
Q psy1413 311 RAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL--LQGE 388 (408)
Q Consensus 311 ~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~--~~~~ 388 (408)
...+.++++++|+|+|++|++++|+++.+|+++++++++++++.+.++++|++.++++... ..++.+.+..+ +.++
T Consensus 176 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 253 (364)
T PLN02702 176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAKQLGADEIVLVSTN--IEDVESEVEEIQKAMGG 253 (364)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHhCCCEEEecCcc--cccHHHHHHHHhhhcCC
Confidence 7788999999999779999999999999999988888889999999999999998875321 13445555544 2345
Q ss_pred CCceEEEcccchhhhhh
Q psy1413 389 QPDKTIDCSGIESTIKL 405 (408)
Q Consensus 389 ~~d~i~d~~g~~~~~~~ 405 (408)
++|++|||+|+...+..
T Consensus 254 ~~d~vid~~g~~~~~~~ 270 (364)
T PLN02702 254 GIDVSFDCVGFNKTMST 270 (364)
T ss_pred CCCEEEECCCCHHHHHH
Confidence 89999999996555443
No 64
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.88 E-value=2.2e-22 Score=191.52 Aligned_cols=224 Identities=19% Similarity=0.155 Sum_probs=163.8
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCC-CCCCCEEEEcc-------CcccccCCcceecc
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH-LKVDNQTRFVP-------EFRNVCLSPILRRR 72 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~-~~vGdrV~~~~-------~~~~~~~~~~~~~p 72 (408)
|+++|||++|++.+ .|.++ ....+|.++|||++|+|+++|++|++ |++||||...+ ++...+...++..|
T Consensus 37 v~~~gi~~~d~~~~-~g~~~-~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~iP 114 (324)
T cd08291 37 VEAAPINPSDLGFL-KGQYG-STKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPLP 114 (324)
T ss_pred EEEccCCHHHHHHh-cCcCC-CCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEECC
Confidence 46899999999987 44322 12357899999999999999999996 99999998653 34456666788889
Q ss_pred ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEE--ccCccccccccccccccCc-----------------------
Q psy1413 73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYL--THGQIGDFRLSDPMIVGHE----------------------- 127 (408)
Q Consensus 73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~--g~G~vG~~~i~~a~~~G~~----------------------- 127 (408)
+++++++.+.++....+++.. .......+++++|+ |+|++|++++|+++.+|+.
T Consensus 115 ~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~~~g~~~~i 193 (324)
T cd08291 115 DGVSFEQGASSFVNPLTALGM-LETAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLKKIGAEYVL 193 (324)
T ss_pred CCCCHHHHhhhcccHHHHHHH-HHhhccCCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEE
Confidence 988886555555544444311 11222356667774 6899999999998877762
Q ss_pred -------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-Cc-ccCHHHHHhcCcEEEEeecCC--
Q psy1413 128 -------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DV-KIPLVLTMTKEIDIRGVFRYA-- 182 (408)
Q Consensus 128 -------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~-~~~~~~~~~~~~~l~g~~~~~-- 182 (408)
++.+++++|... +.+++++++|+++.+|.... .. .++...++.+++++.+++...
T Consensus 194 ~~~~~~~~~~v~~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 273 (324)
T cd08291 194 NSSDPDFLEDLKELIAKLNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWL 273 (324)
T ss_pred ECCCccHHHHHHHHhCCCCCcEEEECCCcHHHHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhh
Confidence 344555555432 56889999999999996543 22 366777889999999987432
Q ss_pred -----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 183 -----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 183 -----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
+++++++++++ +++ +++++++|+|+|+.+||+.+.+++. .+|+++
T Consensus 274 ~~~~~~~~~~~~~~~~-~~~--~~~i~~~~~l~~~~~a~~~~~~~~~-~Gkvv~ 323 (324)
T cd08291 274 QKLGPEVVKKLKKLVK-TEL--KTTFASRYPLALTLEAIAFYSKNMS-TGKKLL 323 (324)
T ss_pred cccCHHHHHHHHHHHh-Ccc--ccceeeEEcHHHHHHHHHHHHhCCC-CCeEEe
Confidence 35778888887 654 5689999999999999999998764 456664
No 65
>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase. NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (
Probab=99.87 E-value=2.8e-21 Score=185.02 Aligned_cols=231 Identities=23% Similarity=0.238 Sum_probs=175.6
Q ss_pred CCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccc--cccccccccCcceeEEEccCchHHHH
Q psy1413 65 LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF--RLSDPMIVGHEASGIVSKVGAKVKHL 142 (408)
Q Consensus 65 ~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~--~i~~a~~~G~~~~~vv~~~g~~~~~~ 142 (408)
...++..|+.+.+ ++.++|. .+.++++.+.++++|+.++.+.. |..... ...++..+|+|+.|+|+..|.. .+
T Consensus 4 ~~~~~~~~~~~~~-~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~-G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~~ 78 (341)
T cd08237 4 QVYRLVRPKFFEV-TYEEENL-REDWVIVRPTYLSICHADQRYYQ-GNRSPEALKKKLPMALIHEGIGVVVSDPTG--TY 78 (341)
T ss_pred cceEEeccceEEE-eecCCCC-CCCeEEEEEEEEEEcCccHHHHc-CCCCcccccCCCCeeccceeEEEEEeeCCC--cc
Confidence 3456677888888 6677785 77899999999999999987753 211110 1246778999999999997752 24
Q ss_pred hhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcC
Q psy1413 143 KATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTG 222 (408)
Q Consensus 143 ~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~ 222 (408)
+.
T Consensus 79 ~v------------------------------------------------------------------------------ 80 (341)
T cd08237 79 KV------------------------------------------------------------------------------ 80 (341)
T ss_pred CC------------------------------------------------------------------------------
Confidence 43
Q ss_pred CCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchh
Q psy1413 223 AGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPL 302 (408)
Q Consensus 223 ~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~ 302 (408)
+|+|.+.+..+|+.| .| +..++|.+..+.+.. .+|+|+||+.++++.++++|+++++++++++.++
T Consensus 81 ----------GdrV~~~~~~~~~~~-~~--~~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~vP~~l~~~~aa~~~~~ 146 (341)
T cd08237 81 ----------GTKVVMVPNTPVEKD-EI--IPENYLPSSRFRSSG-YDGFMQDYVFLPPDRLVKLPDNVDPEVAAFTELV 146 (341)
T ss_pred ----------CCEEEECCCCCchhc-cc--chhccCCCcceeEec-CCCceEEEEEEchHHeEECCCCCChHHhhhhchH
Confidence 999998887777744 45 356788776665543 4799999999999999999999999988888888
Q ss_pred hhhhhhhh---ccCcCCCCEEEEEecchhHHHHHHHHHH-hCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHH
Q psy1413 303 SVGVHACR---RAGVTLGSKVLITGAGPIGLVTLLTARA-LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS 378 (408)
Q Consensus 303 ~~~~~~~~---~~~~~~~~~~lv~G~G~~G~~~~~~~~~-~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~ 378 (408)
+++++++. ....++++++||+|+|++|+.++|+++. +|+.+|++++++++|++.+++.+++..++ ++
T Consensus 147 ~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~~~~~~~~~~--------~~- 217 (341)
T cd08237 147 SVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLFSFADETYLID--------DI- 217 (341)
T ss_pred HHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHhhcCceeehh--------hh-
Confidence 89998873 3446889999999999999999999996 67777999999999999998766654321 11
Q ss_pred HHHHHHhcCCCCceEEEcccc---hhhhhhcC
Q psy1413 379 THIIELLQGEQPDKTIDCSGI---ESTIKLGM 407 (408)
Q Consensus 379 ~~~~~~~~~~~~d~i~d~~g~---~~~~~~~~ 407 (408)
+...++|++||++|+ +.+++.++
T Consensus 218 ------~~~~g~d~viD~~G~~~~~~~~~~~~ 243 (341)
T cd08237 218 ------PEDLAVDHAFECVGGRGSQSAINQII 243 (341)
T ss_pred ------hhccCCcEEEECCCCCccHHHHHHHH
Confidence 112369999999994 34555543
No 66
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.87 E-value=1.5e-21 Score=189.93 Aligned_cols=228 Identities=25% Similarity=0.364 Sum_probs=169.8
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
+.+++||++|++.+ .|.+.. .++|.++|||++|+|+++|++++++++||+|+..+..
T Consensus 32 v~~~~i~~~d~~~~-~g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~ 108 (386)
T cd08283 32 VTATAICGSDLHLY-HGYIPG--MKKGDILGHEFMGVVEEVGPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTN 108 (386)
T ss_pred EEEEecchhhhhhh-cCCCCC--CCCCccccccceEEEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcc
Confidence 45899999999998 443322 3578999999999999999999999999999875311
Q ss_pred ---------------------------------ccccCC--cceeccceeeecccccCCCCCCcceEEEEeeeee-cCCe
Q psy1413 61 ---------------------------------RNVCLS--PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSD 104 (408)
Q Consensus 61 ---------------------------------~~~~~~--~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~ 104 (408)
...... .++..|+++++++.+.++....+++.+. ....+ .+++
T Consensus 109 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~l-~~~~~~~g~~ 187 (386)
T cd08283 109 PSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSDEKALFLSDILPTGYHAA-ELAEVKPGDT 187 (386)
T ss_pred cccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCCHHHHhhhccchhhhHHHH-hhccCCCCCE
Confidence 111112 4566677777655555666655555332 22222 4778
Q ss_pred EEEEccCccccccccccccccC--------------------------------------------cceeEEEccCch--
Q psy1413 105 VHYLTHGQIGDFRLSDPMIVGH--------------------------------------------EASGIVSKVGAK-- 138 (408)
Q Consensus 105 vlv~g~G~vG~~~i~~a~~~G~--------------------------------------------~~~~vv~~~g~~-- 138 (408)
++|+|+|.+|++++++++..|. .++.+++++|..
T Consensus 188 VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~vi~~~~~~~~~~~l~~~~~~~~~D~vld~vg~~~~ 267 (386)
T cd08283 188 VAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAETINFEEVDDVVEALRELTGGRGPDVCIDAVGMEAH 267 (386)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEEEcCCcchHHHHHHHHHcCCCCCCEEEECCCCccc
Confidence 9999999999888877766653 134455555421
Q ss_pred ----------------------HHHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHc
Q psy1413 139 ----------------------VKHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVAS 194 (408)
Q Consensus 139 ----------------------~~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~ 194 (408)
.+.+++++++|+++.+|.... ...++...++.+++++.+..... +.++++++++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~ 347 (386)
T cd08283 268 GSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPIGAAMNKGLTLRMGQTHVQRYLPRLLELIES 347 (386)
T ss_pred ccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccCHHHHHhCCcEEEeccCCchHHHHHHHHHHHc
Confidence 257889999999999997654 34556667789999999976554 679999999999
Q ss_pred CCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 195 GKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 195 g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+++++.+++++.|+++|+.+||+.+.+++...+|++++
T Consensus 348 g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 385 (386)
T cd08283 348 GELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK 385 (386)
T ss_pred CCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence 99998878899999999999999999887778899885
No 67
>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases. This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.86 E-value=2.1e-21 Score=186.77 Aligned_cols=228 Identities=23% Similarity=0.252 Sum_probs=161.8
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
|+++|||++|++.+. +.. ....+|.++|||++|+|+++|++++++++||+|+..+..
T Consensus 31 v~a~~i~~~d~~~~~-g~~--~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~ 107 (351)
T cd08285 31 PTAVAPCTSDVHTVW-GGA--PGERHGMILGHEAVGVVEEVGSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGML 107 (351)
T ss_pred EEEEEechhhHHHhc-CCC--CCCCCCcccCcceEEEEEEecCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCC
Confidence 468999999999874 322 123568999999999999999999999999999874321
Q ss_pred ----------------ccccC--CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccc
Q psy1413 61 ----------------RNVCL--SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDP 121 (408)
Q Consensus 61 ----------------~~~~~--~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a 121 (408)
...+. ..++..|+++++++.+.++.++.+++.+ .....+ .+++++|.|+|++|+++++++
T Consensus 108 ~~~~~~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~~~-~~~~~~~~g~~vlI~g~g~iG~~~~~la 186 (351)
T cd08285 108 GGWKFSNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGFHG-AELANIKLGDTVAVFGIGPVGLMAVAGA 186 (351)
T ss_pred CCccccCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHHHH-HHccCCCCCCEEEEECCCHHHHHHHHHH
Confidence 11111 1344455555554444444444444322 111222 478899999999999999888
Q ss_pred ccccC-------------------------------------------cceeEEEccCch---HHHHhhccCCcEEEEEc
Q psy1413 122 MIVGH-------------------------------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVG 155 (408)
Q Consensus 122 ~~~G~-------------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G 155 (408)
+.+|. .++.+++++|.. .+.+++++++|+++.+|
T Consensus 187 k~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g 266 (351)
T cd08285 187 RLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVN 266 (351)
T ss_pred HHcCCCeEEEEeCCHHHHHHHHHcCCceEecCCCCCHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEec
Confidence 87765 134455555543 26789999999999999
Q ss_pred cCCCC--cccCH--HHHHhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCc-eeeeeccchHHHHHHHHHcCCCCceE
Q psy1413 156 AGSQD--VKIPL--VLTMTKEIDIRGVFRY--ANDYPIALAMVASGKVDVKKL-ITHNYLLEDTLHAFETAKTGAGNAIK 228 (408)
Q Consensus 156 ~~~~~--~~~~~--~~~~~~~~~l~g~~~~--~~~~~~~~~l~~~g~~~~~~~-i~~~~~l~~~~~a~~~~~~~~~~~~k 228 (408)
..... ..++. .....+..++.+.+.. .++++++++++++|++++..+ ++++|+|+|+++|++.+.+++...+|
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k 346 (351)
T cd08285 267 YYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIK 346 (351)
T ss_pred ccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEE
Confidence 76643 33442 2234667778776643 378999999999999998554 45679999999999999999888899
Q ss_pred EEEE
Q psy1413 229 VMIH 232 (408)
Q Consensus 229 vvi~ 232 (408)
++++
T Consensus 347 ~~~~ 350 (351)
T cd08285 347 PVII 350 (351)
T ss_pred EEEe
Confidence 9875
No 68
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.86 E-value=8.9e-21 Score=183.33 Aligned_cols=237 Identities=28% Similarity=0.444 Sum_probs=186.1
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.+ +..++|.+.+..+++.+...++++.++.+.- |... -......|.++.|++..+|.....++.
T Consensus 12 ~~~~-~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~-g~~~---~~~~~i~g~e~~G~V~~vG~~v~~~~~--------- 77 (365)
T cd05279 12 PLSI-EEIEVAPPKAGEVRIKVVATGVCHTDLHVID-GKLP---TPLPVILGHEGAGIVESIGPGVTTLKP--------- 77 (365)
T ss_pred CcEE-EEeecCCCCCCeEEEEEEEeeecchhHHHhc-CCCC---CCCCcccccceeEEEEEeCCCcccCCC---------
Confidence 4566 5667787788888899999999887766542 1111 122346789999999999865332332
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 78 -------------------------------------------------------------------------------G 78 (365)
T cd05279 78 -------------------------------------------------------------------------------G 78 (365)
T ss_pred -------------------------------------------------------------------------------C
Confidence 8
Q ss_pred CceeecCCCcccccccccCCccccccceeecccCC--------------------CCccceeEEeeccceeeeCCCCCCc
Q psy1413 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPP--------------------DHGNLSRYYRHAADFCHKLPDHVSL 293 (408)
Q Consensus 234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~g~~~~~~~~~~~~~~~~p~~~~~ 293 (408)
|+|+..+..+|+.|.+|..+.++.|+....++... ..|+|++|..++++.++++|+++++
T Consensus 79 d~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~ 158 (365)
T cd05279 79 DKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPL 158 (365)
T ss_pred CEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCH
Confidence 88888777889999999999999998766543111 2478999999999999999999999
Q ss_pred ccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCC
Q psy1413 294 EEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRN 371 (408)
Q Consensus 294 ~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~ 371 (408)
++++.+. .+.++++++ ....+++++++||+|+|++|+.++|+++.+|++.++++++++++.+.++++|++++++.++.
T Consensus 159 ~~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~ 238 (365)
T cd05279 159 EKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQ 238 (365)
T ss_pred HHhhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccc
Confidence 8888777 677788776 56788999999999779999999999999999878888889999999999999999987651
Q ss_pred CChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413 372 HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
.++..+.++++++ +++|++||++|....++.+
T Consensus 239 --~~~~~~~l~~~~~-~~~d~vid~~g~~~~~~~~ 270 (365)
T cd05279 239 --DKPIVEVLTEMTD-GGVDYAFEVIGSADTLKQA 270 (365)
T ss_pred --cchHHHHHHHHhC-CCCcEEEECCCCHHHHHHH
Confidence 1266777888774 6899999999875555443
No 69
>KOG1197|consensus
Probab=99.86 E-value=2.3e-21 Score=167.33 Aligned_cols=208 Identities=25% Similarity=0.331 Sum_probs=174.0
Q ss_pred eeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccc-cccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDF-RLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~-~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
+.+++-+.+ +..++|.+.+.+......+++++--++. +.. |+. ...++...|.|+.|++.++|...+..+.
T Consensus 17 ~Ggydvlk~-ed~pv~~papgel~iknka~GlNfid~y-~Rk---GlY~~~plPytpGmEaaGvVvAvG~gvtdrkv--- 88 (336)
T KOG1197|consen 17 FGGYDVLKL-EDRPVPPPAPGELTIKNKACGLNFIDLY-FRK---GLYDPAPLPYTPGMEAAGVVVAVGEGVTDRKV--- 88 (336)
T ss_pred cCCcceEEE-eeecCCCCCCCceEEeehhcCccHHHHH-Hhc---cccCCCCCCcCCCcccceEEEEecCCcccccc---
Confidence 345788888 8899999999988888888887533221 111 233 4456778899999999999987555554
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 89 -------------------------------------------------------------------------------- 88 (336)
T KOG1197|consen 89 -------------------------------------------------------------------------------- 88 (336)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhh
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGV 306 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~ 306 (408)
+|+|+.- ...|.|+++..+|...++++|+.+++.++|.+. ...|++
T Consensus 89 -----GDrVayl----------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~lTAy 135 (336)
T KOG1197|consen 89 -----GDRVAYL----------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQGLTAY 135 (336)
T ss_pred -----ccEEEEe----------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHHHHHH
Confidence 8888641 257999999999999999999999998887655 667777
Q ss_pred hhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413 307 HAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL 384 (408)
Q Consensus 307 ~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~ 384 (408)
.-+ +...+++++++||+.+ ||+|+.+.||++..|+. +|++.++.+|.+.+++.|+.+.|+++. +|+.++++++
T Consensus 136 ~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~-tI~~asTaeK~~~akenG~~h~I~y~~----eD~v~~V~ki 210 (336)
T KOG1197|consen 136 MLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAH-TIATASTAEKHEIAKENGAEHPIDYST----EDYVDEVKKI 210 (336)
T ss_pred HHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcE-EEEEeccHHHHHHHHhcCCcceeeccc----hhHHHHHHhc
Confidence 776 5688999999999988 99999999999999996 888889999999999999999999998 9999999999
Q ss_pred hcCCCCceEEEcccchhh
Q psy1413 385 LQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 385 ~~~~~~d~i~d~~g~~~~ 402 (408)
|+++|+|+++|.+|.+.+
T Consensus 211 TngKGVd~vyDsvG~dt~ 228 (336)
T KOG1197|consen 211 TNGKGVDAVYDSVGKDTF 228 (336)
T ss_pred cCCCCceeeeccccchhh
Confidence 999999999999997654
No 70
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.86 E-value=1.2e-20 Score=180.86 Aligned_cols=237 Identities=33% Similarity=0.555 Sum_probs=185.4
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.. ...+.|.+.+.+++++..+++++..++.+.-.+.........+...|.++.|.+..+|+....++.
T Consensus 12 ~~~~-~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~--------- 81 (341)
T PRK05396 12 GLWL-TDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKV--------- 81 (341)
T ss_pred ceEE-EECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCC---------
Confidence 4555 556777788888899999999987776653211111112234456789999999999865333333
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 82 -------------------------------------------------------------------------------G 82 (341)
T PRK05396 82 -------------------------------------------------------------------------------G 82 (341)
T ss_pred -------------------------------------------------------------------------------C
Confidence 8
Q ss_pred CceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccC
Q psy1413 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAG 313 (408)
Q Consensus 234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~ 313 (408)
++|...+..+|+.|..|..+++++|.+..+.+. ..+|+|++|+.++++.++++|+++++++++.+.++.+++++... .
T Consensus 83 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~~~~~~~~~~~~~-~ 160 (341)
T PRK05396 83 DRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGV-NRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIFDPFGNAVHTALS-F 160 (341)
T ss_pred CEEEECCCCCCCCChhhhCcChhhCCCcceeee-cCCCcceeeEEechHHeEECcCCCCHHHhHhhhHHHHHHHHHHc-C
Confidence 888888888999999999999999988655443 35799999999999999999999998887766666666665432 2
Q ss_pred cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413 314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393 (408)
Q Consensus 314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i 393 (408)
..++++++|.|+|++|++++|+++.+|+++|+++++++++.+.++++|++.++++++ .+..+.+++++.++++|.+
T Consensus 161 ~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~lg~~~~~~~~~----~~~~~~~~~~~~~~~~d~v 236 (341)
T PRK05396 161 DLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELARKMGATRAVNVAK----EDLRDVMAELGMTEGFDVG 236 (341)
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhCCcEEecCcc----ccHHHHHHHhcCCCCCCEE
Confidence 458899999877999999999999999987888888899999999999999998876 5677778888878899999
Q ss_pred EEcccchhhhhh
Q psy1413 394 IDCSGIESTIKL 405 (408)
Q Consensus 394 ~d~~g~~~~~~~ 405 (408)
|||+|+...+..
T Consensus 237 ~d~~g~~~~~~~ 248 (341)
T PRK05396 237 LEMSGAPSAFRQ 248 (341)
T ss_pred EECCCCHHHHHH
Confidence 999987655443
No 71
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=99.86 E-value=1.4e-20 Score=178.99 Aligned_cols=126 Identities=21% Similarity=0.232 Sum_probs=108.1
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
|+|++|..+++..++++|++++.++++.++ ...++++++....+++++++||+|+ |.+|++++|+|+.+|++ ++++.
T Consensus 93 g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~-v~~~~ 171 (324)
T cd08292 93 GTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGIN-VINLV 171 (324)
T ss_pred CcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEe
Confidence 346788888888999999999998888766 4566777777778899999999998 99999999999999997 77777
Q ss_pred cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
+++++.+.++++|++.+++.++ .+..+.+++++.++++|++|||+|+..
T Consensus 172 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~i~~~~~~~~~d~v~d~~g~~~ 220 (324)
T cd08292 172 RRDAGVAELRALGIGPVVSTEQ----PGWQDKVREAAGGAPISVALDSVGGKL 220 (324)
T ss_pred cCHHHHHHHHhcCCCEEEcCCC----chHHHHHHHHhCCCCCcEEEECCCChh
Confidence 8888888888899999998876 677788889998889999999999754
No 72
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.85 E-value=1.5e-20 Score=179.96 Aligned_cols=230 Identities=30% Similarity=0.521 Sum_probs=183.4
Q ss_pred cccCCCCCCcceEEEEeeeeecCCeEEEEccCcccc-ccccccccccCcceeEEEccCchHHHHhhccCCcEEEEEccCC
Q psy1413 80 QKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGS 158 (408)
Q Consensus 80 ~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~-~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~~ 158 (408)
..+.|.+.+..+.+.+...+++..++.+. .|.... .....+...|.++.|.+..+|+....++.
T Consensus 17 ~~~~~~~~~~~v~v~v~~~~i~~~d~~~~-~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~-------------- 81 (340)
T cd05284 17 DVPVPEPGPGQVLVRVGGAGVCHSDLHVI-DGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKE-------------- 81 (340)
T ss_pred eCCCCCCCCCeEEEEEEEEeecchhHHHH-cCCCcccccCCCCeecccceeEEEEEeCCCCCcCcC--------------
Confidence 34556666777888888888887766553 121111 11233456789999999998865333333
Q ss_pred CCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceee
Q psy1413 159 QDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAI 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~ 238 (408)
+|+|..
T Consensus 82 --------------------------------------------------------------------------Gd~V~~ 87 (340)
T cd05284 82 --------------------------------------------------------------------------GDPVVV 87 (340)
T ss_pred --------------------------------------------------------------------------CCEEEE
Confidence 899988
Q ss_pred cCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc--cCcC
Q psy1413 239 EPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR--AGVT 315 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~--~~~~ 315 (408)
.+..+|+.|..|..|.+++|...++.+. ..+|+|++|+.++++.++++|++++.++++.++ .+.++++++.. ..+.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~ 166 (340)
T cd05284 88 HPPWGCGTCRYCRRGEENYCENARFPGI-GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLD 166 (340)
T ss_pred cCCCCCCCChHHhCcCcccCCCCcccCc-cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCC
Confidence 8888999999999999999999998877 468999999999999999999999998888777 67788888744 3578
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID 395 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d 395 (408)
+++++||+|+|++|+.++|+++.+|+.+|+.+++++++.+.++++|++++++++. . ..+.+++++.+.++|+++|
T Consensus 167 ~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~-~~~~i~~~~~~~~~dvvld 241 (340)
T cd05284 167 PGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLAERLGADHVLNASD----D-VVEEVRELTGGRGADAVID 241 (340)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHHHhCCcEEEcCCc----c-HHHHHHHHhCCCCCCEEEE
Confidence 8999999999779999999999999444888888999999999999999998876 4 6667788777778999999
Q ss_pred cccchhhhh
Q psy1413 396 CSGIESTIK 404 (408)
Q Consensus 396 ~~g~~~~~~ 404 (408)
|+|+...++
T Consensus 242 ~~g~~~~~~ 250 (340)
T cd05284 242 FVGSDETLA 250 (340)
T ss_pred cCCCHHHHH
Confidence 999754443
No 73
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.85 E-value=2.2e-20 Score=182.48 Aligned_cols=236 Identities=24% Similarity=0.270 Sum_probs=184.6
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccc-------cccccccCcceeEEEccCchHHHHhhccC
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRL-------SDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i-------~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
+.. +..++|.+....+++.+..++++..++.+.-...+..... .....+|.++.|.+..+|...+.++.
T Consensus 30 ~~~-~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~--- 105 (393)
T cd08246 30 IQL-EDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKV--- 105 (393)
T ss_pred eEE-eecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCC---
Confidence 445 4556777777888889999999877766532112211100 01125688999999988864332333
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 106 -------------------------------------------------------------------------------- 105 (393)
T cd08246 106 -------------------------------------------------------------------------------- 105 (393)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhh
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGV 306 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~ 306 (408)
+++|...+...|+.|..|..+.+++|....++|....+|+|++|..+++..++++|++++.++++.+. .+.+++
T Consensus 106 -----Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~ 180 (393)
T cd08246 106 -----GDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAY 180 (393)
T ss_pred -----CCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHH
Confidence 88988888888999999999999999988888877678999999999999999999999988877665 778888
Q ss_pred hhhhc---cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC----------
Q psy1413 307 HACRR---AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH---------- 372 (408)
Q Consensus 307 ~~~~~---~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~---------- 372 (408)
+++.. ..++++++++|+|+ |++|++++++++.+|++ ++++++++++.+.++++|++.++++++..
T Consensus 181 ~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~-vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~ 259 (393)
T cd08246 181 RMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGAN-PVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNS 259 (393)
T ss_pred HHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccc
Confidence 88743 57889999999998 99999999999999998 66778899999999999999999875421
Q ss_pred --------ChHHHHHHHHHHhcCC-CCceEEEcccch
Q psy1413 373 --------SLEEISTHIIELLQGE-QPDKTIDCSGIE 400 (408)
Q Consensus 373 --------~~~~~~~~~~~~~~~~-~~d~i~d~~g~~ 400 (408)
....+.+.+.+++.++ ++|++|||+|+.
T Consensus 260 ~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~ 296 (393)
T cd08246 260 EAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRA 296 (393)
T ss_pred hhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchH
Confidence 0113567788888877 899999999873
No 74
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.85 E-value=1.8e-20 Score=181.12 Aligned_cols=232 Identities=28% Similarity=0.480 Sum_probs=180.9
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV 154 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~ 154 (408)
+.. +..++|.+.+..+++.+.+++++..++.+.- | ..........|.++.|++..+|+..+.++.
T Consensus 15 ~~~-~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~-g---~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~---------- 79 (365)
T cd08278 15 FVL-EDVELDDPRPDEVLVRIVATGICHTDLVVRD-G---GLPTPLPAVLGHEGAGVVEAVGSAVTGLKP---------- 79 (365)
T ss_pred ceE-EEeecCCCCCCeEEEEEEEeecCcccHHHhc-C---CCCCCCCcccccceeEEEEEeCCCcccCCC----------
Confidence 444 4566677777888889999999887766542 1 111223446789999999999865333333
Q ss_pred ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
+|
T Consensus 80 ------------------------------------------------------------------------------Gd 81 (365)
T cd08278 80 ------------------------------------------------------------------------------GD 81 (365)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 88
Q ss_pred ceeecCCCcccccccccCCccccccceeec---cc-------------------CCCCccceeEEeeccceeeeCCCCCC
Q psy1413 235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---AT-------------------PPDHGNLSRYYRHAADFCHKLPDHVS 292 (408)
Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-------------------~~~~g~~~~~~~~~~~~~~~~p~~~~ 292 (408)
+|...+ .+|+.|.+|..++.++|.+.... +. ....|+|++|+.++++.++++|++++
T Consensus 82 ~V~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s 160 (365)
T cd08278 82 HVVLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVP 160 (365)
T ss_pred EEEEcc-cCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCC
Confidence 988866 48999999999999999764321 10 11258999999999999999999999
Q ss_pred cccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCC
Q psy1413 293 LEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDR 370 (408)
Q Consensus 293 ~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~ 370 (408)
.++++.++ ...++++++ ....++++++++|+|+|++|+.++|+++.+|++++++++++++|.+.++++|++.++++++
T Consensus 161 ~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~ 240 (365)
T cd08278 161 LELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKE 240 (365)
T ss_pred HHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCC
Confidence 88887776 556667765 5567889999999977999999999999999988999999999999999999999998866
Q ss_pred CCChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413 371 NHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405 (408)
Q Consensus 371 ~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~ 405 (408)
.+..+.+++.+ ++++|+++||+|....++.
T Consensus 241 ----~~~~~~v~~~~-~~~~d~vld~~g~~~~~~~ 270 (365)
T cd08278 241 ----EDLVAAIREIT-GGGVDYALDTTGVPAVIEQ 270 (365)
T ss_pred ----cCHHHHHHHHh-CCCCcEEEECCCCcHHHHH
Confidence 55666777777 7789999999987655443
No 75
>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase. This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.
Probab=99.85 E-value=5.6e-22 Score=184.64 Aligned_cols=184 Identities=18% Similarity=0.213 Sum_probs=129.1
Q ss_pred cccCCccEEEEEeCCCCC------CCCCCCEEEEccCcccccCCcceec--------------------------cceee
Q psy1413 29 IVGHEASGIVSKVGAKVK------HLKVDNQTRFVPEFRNVCLSPILRR--------------------------RFSLR 76 (408)
Q Consensus 29 i~GhE~~G~Vv~vG~~v~------~~~vGdrV~~~~~~~~~~~~~~~~~--------------------------p~~~~ 76 (408)
++|||++|+|+++|++|+ ++++||||++.+...|..+..|..+ .+++.
T Consensus 1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey~~ 80 (280)
T TIGR03366 1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEHCH 80 (280)
T ss_pred CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceeeEE
Confidence 579999999999999999 8999999987654332211111110 11112
Q ss_pred ecc---cccCCCCCCcceEEE------------EeeeeecCCeEEEEccCccccccccccccccC---------------
Q psy1413 77 FRE---QKPIEDPDDHEVLLE------------MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH--------------- 126 (408)
Q Consensus 77 ~~~---~~~lp~~~~~~~~~~------------~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~--------------- 126 (408)
.++ ..++|...+.+..+. .......+++++|+|+|++|++++|+++.+|+
T Consensus 81 v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~r~~~ 160 (280)
T TIGR03366 81 LPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGDLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRREL 160 (280)
T ss_pred ecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHH
Confidence 211 122232211111000 00111257899999999999999988887765
Q ss_pred --------------------------cceeEEEccCchH---HHHhhccCCcEEEEEccCC--CCcccCHHHHHhcCcEE
Q psy1413 127 --------------------------EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGS--QDVKIPLVLTMTKEIDI 175 (408)
Q Consensus 127 --------------------------~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l 175 (408)
.++.+++++|... +++++++++|+++.+|... .+.+++...+++|++++
T Consensus 161 a~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~~~~~i 240 (280)
T TIGR03366 161 ALSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVRRWLTI 240 (280)
T ss_pred HHHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHhCCcEE
Confidence 1345666666432 6799999999999999653 45688888999999999
Q ss_pred EEeecCC-CcHHHHHHHHHc--CCCCCCCceeeeeccchH
Q psy1413 176 RGVFRYA-NDYPIALAMVAS--GKVDVKKLITHNYLLEDT 212 (408)
Q Consensus 176 ~g~~~~~-~~~~~~~~l~~~--g~~~~~~~i~~~~~l~~~ 212 (408)
.|++..+ ++++++++++.+ ++++++++++|+|||+|+
T Consensus 241 ~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 241 RGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred EecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 9998876 789999999998 478888999999999874
No 76
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=99.85 E-value=1.9e-20 Score=179.75 Aligned_cols=123 Identities=24% Similarity=0.268 Sum_probs=97.5
Q ss_pred eeEEeeccceeeeCCCCCCccc-----ccccchhhhhhhhh-hccCcCCC--CEEEEEec-chhHHHHHHHHHHhCCCeE
Q psy1413 274 SRYYRHAADFCHKLPDHVSLEE-----GALLEPLSVGVHAC-RRAGVTLG--SKVLITGA-GPIGLVTLLTARALGASRV 344 (408)
Q Consensus 274 ~~~~~~~~~~~~~~p~~~~~~~-----aa~~~~~~~~~~~~-~~~~~~~~--~~~lv~G~-G~~G~~~~~~~~~~Ga~~v 344 (408)
++|+.++++.++++|++++.++ ++...+..++++++ ....++++ +++||+|+ |++|++++|+++.+|+++|
T Consensus 104 ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~V 183 (345)
T cd08293 104 QTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRV 183 (345)
T ss_pred eeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEE
Confidence 3456666677888888754332 23333677888887 45567776 89999998 9999999999999999669
Q ss_pred EEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 345 VITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 345 v~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
+++++++++.+.+++ +|++.++++++ +++.+.++++++ +++|++||++|+..
T Consensus 184 i~~~~s~~~~~~~~~~lGa~~vi~~~~----~~~~~~i~~~~~-~gvd~vid~~g~~~ 236 (345)
T cd08293 184 VGICGSDEKCQLLKSELGFDAAINYKT----DNVAERLRELCP-EGVDVYFDNVGGEI 236 (345)
T ss_pred EEEcCCHHHHHHHHHhcCCcEEEECCC----CCHHHHHHHHCC-CCceEEEECCCcHH
Confidence 999899999988866 99999999876 667778888875 78999999999764
No 77
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.85 E-value=1.1e-20 Score=181.46 Aligned_cols=229 Identities=24% Similarity=0.341 Sum_probs=165.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR------------------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~------------------- 61 (408)
|++++||++|++.+. |.+. ...+|.++|||++|+|+++|++++.+++||||+..+...
T Consensus 32 v~a~~i~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (345)
T cd08286 32 MLKTTICGTDLHILK-GDVP--TVTPGRILGHEGVGVVEEVGSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGG 108 (345)
T ss_pred EEEeeecchhhHHHc-CCCC--CCCCCceecccceEEEEEeccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcc
Confidence 468999999999884 4322 234588999999999999999999999999998754211
Q ss_pred ---------------cccCC--cceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCcccccccccccc
Q psy1413 62 ---------------NVCLS--PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMI 123 (408)
Q Consensus 62 ---------------~~~~~--~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~ 123 (408)
....+ .++..|+++...+.+.++....+++........ ..+++++|.|+|.+|++++++++.
T Consensus 109 ~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~ 188 (345)
T cd08286 109 WILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTGYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQL 188 (345)
T ss_pred cccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHH
Confidence 11222 445555555554444444444444321111112 247889998999999999999888
Q ss_pred cc-Cc------------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEccC
Q psy1413 124 VG-HE------------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAG 157 (408)
Q Consensus 124 ~G-~~------------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~ 157 (408)
+| .. ++.+++++|... ..+++++++|+++.+|..
T Consensus 189 ~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~ 268 (345)
T cd08286 189 YSPSKIIMVDLDDNRLEVAKKLGATHTVNSAKGDAIEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVH 268 (345)
T ss_pred cCCCeEEEEcCCHHHHHHHHHhCCCceeccccccHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEeccc
Confidence 87 31 233444444321 345899999999999977
Q ss_pred CCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcC-CCCceEEEEE
Q psy1413 158 SQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTG-AGNAIKVMIH 232 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~-~~~~~kvvi~ 232 (408)
..+..++...++.+++++.+.......+++++++++++.+++.++++++|++++++++++.+... +.+..|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~ 344 (345)
T cd08286 269 GKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIID 344 (345)
T ss_pred CCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEe
Confidence 66667777777889999988655446789999999999998888899999999999999999876 3366888875
No 78
>PLN02702 L-idonate 5-dehydrogenase
Probab=99.85 E-value=5.7e-21 Score=184.70 Aligned_cols=229 Identities=36% Similarity=0.598 Sum_probs=156.9
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccC---------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCL--------------- 65 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~--------------- 65 (408)
|+++|||++|++.+.....+.+...+|.++|||++|+|+++|++++.|++||+|++.+...+.++
T Consensus 48 v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~c~~~~ 127 (364)
T PLN02702 48 MKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALEPGISCWRCNLCKEGRYNLCPEMK 127 (364)
T ss_pred EEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEcCCCCCCCCcchhCcCcccCCCcc
Confidence 46899999999987432212233346889999999999999999999999999987543322111
Q ss_pred -------------------CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413 66 -------------------SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG 125 (408)
Q Consensus 66 -------------------~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G 125 (408)
..++..|+++++.+.+ ...++..++... ....+ .+++++|+|+|++|++++++++.+|
T Consensus 128 ~~~~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa-~~~~~~~a~~~~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G 205 (364)
T PLN02702 128 FFATPPVHGSLANQVVHPADLCFKLPENVSLEEGA-MCEPLSVGVHAC-RRANIGPETNVLVMGAGPIGLVTMLAARAFG 205 (364)
T ss_pred ccCCCCCCCcccceEEcchHHeEECCCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 1223334444332111 111111111100 01111 4778999999999998888877666
Q ss_pred Cc-----------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEc
Q psy1413 126 HE-----------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVG 155 (408)
Q Consensus 126 ~~-----------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G 155 (408)
+. ++.+++++|.. .+++++++++|+++.+|
T Consensus 206 ~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g 285 (364)
T PLN02702 206 APRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGFNKTMSTALEATRAGGKVCLVG 285 (364)
T ss_pred CCEEEEECCCHHHHHHHHHhCCCEEEecCcccccHHHHHHHHhhhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEc
Confidence 42 23344444422 26789999999999999
Q ss_pred cCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeecc--chHHHHHHHHHcCCCCceEEEEE
Q psy1413 156 AGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLL--EDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 156 ~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l--~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
.......++...+.++++++.+.+.....++++++++++++++++++++++|++ +++++||+.+.+++ ..+|+++.
T Consensus 286 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~-~~~kvv~~ 363 (364)
T PLN02702 286 MGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLITHRFGFSQKEVEEAFETSARGG-NAIKVMFN 363 (364)
T ss_pred cCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCchHheEEEeccChHHHHHHHHHHhcCC-CceEEEEe
Confidence 754445556677889999999988766788999999999999877778999665 89999999988764 45677763
No 79
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.84 E-value=2.8e-20 Score=181.01 Aligned_cols=236 Identities=32% Similarity=0.526 Sum_probs=185.1
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEcc---Ccccc-ccccccccccCcceeEEEccCchHHHHhhccCCc
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTH---GQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGG 149 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~---G~vG~-~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG 149 (408)
.+.+ +..++|.+.+..+.+.+.+++++..++.+.-. +.... ....+...+|.++.|++..+|+..+.++.
T Consensus 38 ~~~~-~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~----- 111 (384)
T cd08265 38 ELRV-EDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEK----- 111 (384)
T ss_pred CEEE-EECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCC-----
Confidence 4666 66678888888889999999998777655321 11000 01123456788999999999864333333
Q ss_pred EEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEE
Q psy1413 150 CLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV 229 (408)
Q Consensus 150 ~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kv 229 (408)
T Consensus 112 -------------------------------------------------------------------------------- 111 (384)
T cd08265 112 -------------------------------------------------------------------------------- 111 (384)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCC-------CCcccccccchh
Q psy1413 230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDH-------VSLEEGALLEPL 302 (408)
Q Consensus 230 vi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~-------~~~~~aa~~~~~ 302 (408)
+|+|+..+..+|+.|..|..+.+++|.....+|.. .+|+|++|+.++++.++++|++ ++.+.+++..++
T Consensus 112 ---Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~-~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~~a~~~~~~ 187 (384)
T cd08265 112 ---GDPVTAEEMMWCGMCRACRSGSPNHCKNLKELGFS-ADGAFAEYIAVNARYAWEINELREIYSEDKAFEAGALVEPT 187 (384)
T ss_pred ---CCEEEECCCCCCCCChhhhCcCcccCCCcceeeec-CCCcceeeEEechHHeEECCccccccccCCCHHHhhhhhHH
Confidence 89999999999999999999999999987666643 3799999999999999999986 345555555688
Q ss_pred hhhhhhh-hc-cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHH
Q psy1413 303 SVGVHAC-RR-AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTH 380 (408)
Q Consensus 303 ~~~~~~~-~~-~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~ 380 (408)
.++++++ .. ..++++++++|+|+|++|++++|+++.+|+.+|+++++++++.+.++++|++.++++++. +..+..+.
T Consensus 188 ~ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~ 266 (384)
T cd08265 188 SVAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKM-RDCLSGEK 266 (384)
T ss_pred HHHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEccccc-ccccHHHH
Confidence 8889887 33 678999999999779999999999999999779999888889999999999999987641 11356777
Q ss_pred HHHHhcCCCCceEEEcccch
Q psy1413 381 IIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 381 ~~~~~~~~~~d~i~d~~g~~ 400 (408)
+++++.++++|+++||+|+.
T Consensus 267 v~~~~~g~gvDvvld~~g~~ 286 (384)
T cd08265 267 VMEVTKGWGADIQVEAAGAP 286 (384)
T ss_pred HHHhcCCCCCCEEEECCCCc
Confidence 88888888999999999863
No 80
>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1. Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T
Probab=99.84 E-value=6.2e-20 Score=178.69 Aligned_cols=236 Identities=31% Similarity=0.521 Sum_probs=186.3
Q ss_pred eeccceeeecccccCCCCC-CcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 69 LRRRFSLRFREQKPIEDPD-DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~-~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
+..++.+.. +..+.|.+. +..+++.+.++++++.++.+.. |.... ......+|.++.|++..+|+....++.
T Consensus 6 ~~~~~~~~~-~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~-g~~~~--~~~p~~~G~e~~G~V~~vG~~v~~~~~--- 78 (386)
T cd08283 6 WHGKGDVRV-EEVPDPKIEDPTDAIVRVTATAICGSDLHLYH-GYIPG--MKKGDILGHEFMGVVEEVGPEVRNLKV--- 78 (386)
T ss_pred EecCCCceE-EeCCCCCCCCCCeEEEEEEEEecchhhhhhhc-CCCCC--CCCCccccccceEEEEEeCCCCCCCCC---
Confidence 345566666 556677764 7888889999999887776642 21111 123456899999999999975433333
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 79 -------------------------------------------------------------------------------- 78 (386)
T cd08283 79 -------------------------------------------------------------------------------- 78 (386)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeec---------------cc----CCCCccceeEEeeccc--eeee
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---------------AT----PPDHGNLSRYYRHAAD--FCHK 286 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~----~~~~g~~~~~~~~~~~--~~~~ 286 (408)
+|+|+..+..+|++|.+|..+.++.|.+...- +. +..+|+|++|+.++++ .+++
T Consensus 79 -----Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~ 153 (386)
T cd08283 79 -----GDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFK 153 (386)
T ss_pred -----CCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEE
Confidence 89998888888999999999999999864321 11 1247999999999988 8999
Q ss_pred CCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE
Q psy1413 287 LPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT 365 (408)
Q Consensus 287 ~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~ 365 (408)
+|+++++++++.++ ...++++++....+++++++||+|+|++|+.++++|+.+|+.+++.+++++++.+.+++++...+
T Consensus 154 lp~~~~~~~aa~l~~~~~ta~~~l~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~~~~~~~~v 233 (386)
T cd08283 154 IPDDLSDEKALFLSDILPTGYHAAELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMARSHLGAET 233 (386)
T ss_pred CCCCCCHHHHhhhccchhhhHHHHhhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCcEE
Confidence 99999998888776 67889998877788999999999779999999999999999779999999999999999854467
Q ss_pred EecCCCCChH-HHHHHHHHHhcCCCCceEEEcccch
Q psy1413 366 VLIDRNHSLE-EISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 366 i~~~~~~~~~-~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+++.. . ++.+.+++++.++++|++|||+|+.
T Consensus 234 i~~~~----~~~~~~~l~~~~~~~~~D~vld~vg~~ 265 (386)
T cd08283 234 INFEE----VDDVVEALRELTGGRGPDVCIDAVGME 265 (386)
T ss_pred EcCCc----chHHHHHHHHHcCCCCCCEEEECCCCc
Confidence 77655 3 4777888888777899999999864
No 81
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.84 E-value=8.3e-21 Score=181.30 Aligned_cols=223 Identities=22% Similarity=0.263 Sum_probs=161.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------------- 58 (408)
+.++|||++|++.+ .|..+ ...+|.++|||++|+|+++|+++.++++||||++.+
T Consensus 32 v~~~~i~~~d~~~~-~g~~~--~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~ 108 (333)
T cd08296 32 VEACGVCHSDAFVK-EGAMP--GLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENG 108 (333)
T ss_pred EEEEecchHHHHHH-hCCCC--CCCCCcccCcceeEEEEEECCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCC
Confidence 46899999999988 44322 135688999999999999999999999999998632
Q ss_pred ------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413 59 ------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG 125 (408)
Q Consensus 59 ------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G 125 (408)
++...+...++..|+++++.+.+.++....+++.+.. ...+ .+++++|+|+|.+|++++++++.+|
T Consensus 109 ~~~~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~-~~~~~~~~~vlV~g~g~iG~~~~~~a~~~G 187 (333)
T cd08296 109 KVTGVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALR-NSGAKPGDLVAVQGIGGLGHLAVQYAAKMG 187 (333)
T ss_pred CccCcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHH-hcCCCCCCEEEEECCcHHHHHHHHHHHHCC
Confidence 1112223344555666665444444444444332111 1122 4788999999999999999988877
Q ss_pred Cc---------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCccc
Q psy1413 126 HE---------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKI 163 (408)
Q Consensus 126 ~~---------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~ 163 (408)
+. ++.++++.|.. .+.+++++++|+++.+|......++
T Consensus 188 ~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~ 267 (333)
T cd08296 188 FRTVAISRGSDKADLARKLGAHHYIDTSKEDVAEALQELGGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGEPVAV 267 (333)
T ss_pred CeEEEEeCChHHHHHHHHcCCcEEecCCCccHHHHHHhcCCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCCCCCc
Confidence 52 23444444322 1568899999999999987766777
Q ss_pred CHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 164 PLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 164 ~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
+...++.+++++.++.... .+++++++++++++++. ++ +.|+++|+.+||+.+.+++. .+||++
T Consensus 268 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~--~v-~~~~~~~~~~a~~~~~~~~~-~gk~v~ 332 (333)
T cd08296 268 SPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRP--MV-ETFPLEKANEAYDRMMSGKA-RFRVVL 332 (333)
T ss_pred CHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCc--eE-EEEEHHHHHHHHHHHHCCCC-ceeEEe
Confidence 8778889999999988665 78999999998887753 44 68999999999999997644 566665
No 82
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.84 E-value=6.5e-20 Score=175.99 Aligned_cols=241 Identities=28% Similarity=0.449 Sum_probs=187.0
Q ss_pred ceeccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhcc
Q psy1413 68 ILRRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATR 146 (408)
Q Consensus 68 ~~~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~ 146 (408)
++..+..+.. ...++|.+ ....+.+.+..+++++.++.+. .|... .......|.++.|++..+|+....++.
T Consensus 5 ~~~~~~~~~~-~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~-~g~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~-- 77 (345)
T cd08287 5 VIHGPGDIRV-EEVPDPVIEEPTDAVIRVVATCVCGSDLWPY-RGVSP---TRAPAPIGHEFVGVVEEVGSEVTSVKP-- 77 (345)
T ss_pred EEecCCceeE-EeCCCCCCCCCCeEEEEEeeeeecccchhhh-cCCCC---CCCCcccccceEEEEEEeCCCCCccCC--
Confidence 3445666666 55677775 6788888999999988776654 22211 123456799999999999965333333
Q ss_pred CCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCc
Q psy1413 147 PGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNA 226 (408)
Q Consensus 147 ~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~ 226 (408)
T Consensus 78 -------------------------------------------------------------------------------- 77 (345)
T cd08287 78 -------------------------------------------------------------------------------- 77 (345)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred eEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccc--eeeeCCCCCCccccccc-----
Q psy1413 227 IKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALL----- 299 (408)
Q Consensus 227 ~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~----- 299 (408)
+|+|...+..+|+.|..|..+..++|.+..+++. ..+|+|++|..++.+ .++++|++++.+.+...
T Consensus 78 ------Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l 150 (345)
T cd08287 78 ------GDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGA-FVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLAL 150 (345)
T ss_pred ------CCEEEeccccCCCCChhhhCcCcccCCCCCcccC-CCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhh
Confidence 8888775567799999999999999998776664 478999999999875 89999999987222111
Q ss_pred -chhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHH
Q psy1413 300 -EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEIS 378 (408)
Q Consensus 300 -~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~ 378 (408)
..+.++++++....++++++++|.|+|++|+.++|+++.+|++.++++++++++.+.++++|++.++++++ .+..
T Consensus 151 ~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~----~~~~ 226 (345)
T cd08287 151 SDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAREFGATDIVAERG----EEAV 226 (345)
T ss_pred hcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCc----ccHH
Confidence 24566777776778889999999877999999999999999987888888888889999999999999876 5666
Q ss_pred HHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413 379 THIIELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 379 ~~~~~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
+.+.+.+.++++|.+|||+|+...++.+
T Consensus 227 ~~i~~~~~~~~~d~il~~~g~~~~~~~~ 254 (345)
T cd08287 227 ARVRELTGGVGADAVLECVGTQESMEQA 254 (345)
T ss_pred HHHHHhcCCCCCCEEEECCCCHHHHHHH
Confidence 7788887778999999999876555443
No 83
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.84 E-value=5.3e-20 Score=176.49 Aligned_cols=237 Identities=31% Similarity=0.526 Sum_probs=185.3
Q ss_pred ccceeeecccccCCCCC-CcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCc
Q psy1413 71 RRFSLRFREQKPIEDPD-DHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGG 149 (408)
Q Consensus 71 ~p~~~~~~~~~~lp~~~-~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG 149 (408)
.+..+.. +..++|.+. +..+++.+.+++++..++.+.- |.. ........|.++.|++..+|+....++.
T Consensus 8 ~~~~~~~-~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~-g~~---~~~~~~~~g~e~~G~V~~vG~~v~~~~~----- 77 (344)
T cd08284 8 GPGDVRV-EEVPIPQIQDPTDAIVKVTAAAICGSDLHIYR-GHI---PSTPGFVLGHEFVGEVVEVGPEVRTLKV----- 77 (344)
T ss_pred cCCCceE-EeccCCCCCCCCeEEEEEEEeeccccchhhhc-CCC---CCCCCcccccceEEEEEeeCCCccccCC-----
Confidence 3445666 566778765 7888899999999877765542 211 1223456788999999999975433333
Q ss_pred EEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEE
Q psy1413 150 CLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV 229 (408)
Q Consensus 150 ~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kv 229 (408)
T Consensus 78 -------------------------------------------------------------------------------- 77 (344)
T cd08284 78 -------------------------------------------------------------------------------- 77 (344)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCceeecCCCcccccccccCCccccccceeeccc---CCCCccceeEEeeccc--eeeeCCCCCCcccccccc-hhh
Q psy1413 230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT---PPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-PLS 303 (408)
Q Consensus 230 vi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~~~ 303 (408)
+|+|...+..+|+.|.+|..+.+..|++...+|. ...+|+|++|..++++ .++++|+++++++++.++ ++.
T Consensus 78 ---Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ 154 (344)
T cd08284 78 ---GDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILP 154 (344)
T ss_pred ---CCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchH
Confidence 8999888888999999999999999987655532 2346999999999865 999999999988887665 778
Q ss_pred hhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413 304 VGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE 383 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~ 383 (408)
++++++......++++++|+|+|++|+.++|+++.+|+.+++++++++++.+.++++|++ .++.+. .+..+.+.+
T Consensus 155 ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~~~g~~-~~~~~~----~~~~~~l~~ 229 (344)
T cd08284 155 TGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERAAALGAE-PINFED----AEPVERVRE 229 (344)
T ss_pred HHHhhhHhcCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHHHhCCe-EEecCC----cCHHHHHHH
Confidence 888888777888999999997799999999999999985588888888898989999986 466654 456677888
Q ss_pred HhcCCCCceEEEcccchhhhhh
Q psy1413 384 LLQGEQPDKTIDCSGIESTIKL 405 (408)
Q Consensus 384 ~~~~~~~d~i~d~~g~~~~~~~ 405 (408)
++.++++|++|||+|+...+..
T Consensus 230 ~~~~~~~dvvid~~~~~~~~~~ 251 (344)
T cd08284 230 ATEGRGADVVLEAVGGAAALDL 251 (344)
T ss_pred HhCCCCCCEEEECCCCHHHHHH
Confidence 8877899999999997655443
No 84
>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal
Probab=99.84 E-value=2.5e-20 Score=177.95 Aligned_cols=231 Identities=25% Similarity=0.410 Sum_probs=181.0
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.+ +..+.|...+.++++.+.+.++++.++.+.. |... ....+...|.++.|++..+|+..+.++.
T Consensus 12 ~~~~-~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~-g~~~--~~~~p~~~g~e~~G~v~~vG~~v~~~~~--------- 78 (333)
T cd08296 12 PLEL-VERDVPLPGPGEVLIKVEACGVCHSDAFVKE-GAMP--GLSYPRVPGHEVVGRIDAVGEGVSRWKV--------- 78 (333)
T ss_pred CceE-EeccCCCCCCCEEEEEEEEEecchHHHHHHh-CCCC--CCCCCcccCcceeEEEEEECCCCccCCC---------
Confidence 4555 5567777777888889999999887765542 2111 1123456799999999999865333333
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 79 -------------------------------------------------------------------------------G 79 (333)
T cd08296 79 -------------------------------------------------------------------------------G 79 (333)
T ss_pred -------------------------------------------------------------------------------C
Confidence 8
Q ss_pred CceeecC-CCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413 234 DRVAIEP-GVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR 311 (408)
Q Consensus 234 ~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~ 311 (408)
++|+..+ ...|+.|..|..|+++.|++....+.. .+|+|++|+.++++.++++|+++++++++.++ .+.++++++..
T Consensus 80 d~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~-~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~ 158 (333)
T cd08296 80 DRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVT-RDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFNALRN 158 (333)
T ss_pred CEEEeccccCCCCCChhhhCcCcccCCCCCccCcc-cCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHHHHHh
Confidence 8887654 367999999999999999987765542 36999999999999999999999998888766 56667777766
Q ss_pred cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413 312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391 (408)
Q Consensus 312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d 391 (408)
..+++++++||+|+|++|++++|+++.+|++ ++++++++++++.++++|++.+++++. .+..+.+++. +++|
T Consensus 159 ~~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~i~~~~----~~~~~~~~~~---~~~d 230 (333)
T cd08296 159 SGAKPGDLVAVQGIGGLGHLAVQYAAKMGFR-TVAISRGSDKADLARKLGAHHYIDTSK----EDVAEALQEL---GGAK 230 (333)
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHcCCcEEecCCC----ccHHHHHHhc---CCCC
Confidence 6889999999999999999999999999996 888899999999999999999998866 4455556554 3799
Q ss_pred eEEEcccchhhhhh
Q psy1413 392 KTIDCSGIESTIKL 405 (408)
Q Consensus 392 ~i~d~~g~~~~~~~ 405 (408)
+++|++|....++.
T Consensus 231 ~vi~~~g~~~~~~~ 244 (333)
T cd08296 231 LILATAPNAKAISA 244 (333)
T ss_pred EEEECCCchHHHHH
Confidence 99999875545443
No 85
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.84 E-value=1.4e-20 Score=180.15 Aligned_cols=230 Identities=32% Similarity=0.539 Sum_probs=164.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
|.++++|++|++.++.+..+.....+|.++|||++|+|+++|++|+.|++||+|+..+.
T Consensus 28 v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~ 107 (339)
T cd08232 28 VAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVNPSRPCGTCDYCRAGRPNLCLNMR 107 (339)
T ss_pred EEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEccCCcCCCChHHhCcCcccCcccc
Confidence 46899999999876434323333456889999999999999999999999999986322
Q ss_pred -----------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccc
Q psy1413 60 -----------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPM 122 (408)
Q Consensus 60 -----------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~ 122 (408)
+...+...++..|+.++++++ ..+.++.+++..........+++++|.|+|.+|++++++++
T Consensus 108 ~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~a-a~~~~~~~a~~~l~~~~~~~~~~VLI~g~g~vG~~~~~lak 186 (339)
T cd08232 108 FLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRA-ALAEPLAVALHAVNRAGDLAGKRVLVTGAGPIGALVVAAAR 186 (339)
T ss_pred ceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHh-hhcchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 223333445556666666332 33333333322111111126788999888999999988888
Q ss_pred cccC-c---------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCC
Q psy1413 123 IVGH-E---------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQ 159 (408)
Q Consensus 123 ~~G~-~---------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~ 159 (408)
.+|+ . ++.++++.|.. .+.+++|+++|+++.+|....
T Consensus 187 ~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~ 266 (339)
T cd08232 187 RAGAAEIVATDLADAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGG 266 (339)
T ss_pred HcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCchhhhhhhccCCCccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC
Confidence 7765 1 23334444421 267899999999999996555
Q ss_pred CcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 160 DVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+..+++..++.+++++.+.......+++++++++++++++.+.++++|++++++++++.+.++. ..+|++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~-~~gkvvv~ 338 (339)
T cd08232 267 PVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFPLEEAAEAFALAADRT-RSVKVQLS 338 (339)
T ss_pred CccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEecHHHHHHHHHHHHhCC-CceeEEEe
Confidence 5555666667899999888766678999999999999988788899999999999999998764 46677765
No 86
>PLN02514 cinnamyl-alcohol dehydrogenase
Probab=99.84 E-value=3.2e-20 Score=178.80 Aligned_cols=235 Identities=23% Similarity=0.347 Sum_probs=175.4
Q ss_pred eeccc-eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 69 LRRRF-SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 69 ~~~p~-~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
+..|. .+.. ++.++|.+.+.++++.+.++++++.++.+.- |..+. ......+|.|+.|+|..+|+..+.++.
T Consensus 15 ~~~~~~~~~~-~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~-g~~~~--~~~p~i~G~E~~G~Vv~vG~~v~~~~~--- 87 (357)
T PLN02514 15 ARDPSGHLSP-YTYTLRKTGPEDVVIKVIYCGICHTDLHQIK-NDLGM--SNYPMVPGHEVVGEVVEVGSDVSKFTV--- 87 (357)
T ss_pred EecCCCCceE-EeecCCCCCCCcEEEEEEEeccChHHHHhhc-CCcCc--CCCCccCCceeeEEEEEECCCcccccC---
Confidence 33344 2444 5577888888899999999999988776542 22111 123556899999999999975443443
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 88 -------------------------------------------------------------------------------- 87 (357)
T PLN02514 88 -------------------------------------------------------------------------------- 87 (357)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCC-cccccccccCCccccccceeec-------ccCCCCccceeEEeeccceeeeCCCCCCccccccc
Q psy1413 228 KVMIHCDRVAIEPGV-PCRTCTYCKEGRYNLCRQIFFC-------ATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALL 299 (408)
Q Consensus 228 kvvi~~~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~ 299 (408)
+|+|...+.. +|++|..|..++++.|++..+. |. ..+|+|++|+.++++.++++|+++++++++.+
T Consensus 88 -----Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~-~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l 161 (357)
T PLN02514 88 -----GDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGK-PTQGGFASAMVVDQKFVVKIPEGMAPEQAAPL 161 (357)
T ss_pred -----CCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCc-cCCCccccEEEEchHHeEECCCCCCHHHhhhh
Confidence 8898766543 6999999999999999875321 11 23699999999999999999999999888877
Q ss_pred c-hhhhhhhhhhc-cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHH
Q psy1413 300 E-PLSVGVHACRR-AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEE 376 (408)
Q Consensus 300 ~-~~~~~~~~~~~-~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~ 376 (408)
+ .+.++++++.. ...+++++++|+|+|++|+.++|+++.+|++ ++++++++++.+.+ +++|++.+++..+ .
T Consensus 162 ~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~-vi~~~~~~~~~~~~~~~~Ga~~~i~~~~----~- 235 (357)
T PLN02514 162 LCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHH-VTVISSSDKKREEALEHLGADDYLVSSD----A- 235 (357)
T ss_pred hhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHhcCCcEEecCCC----h-
Confidence 6 55677877754 3457899999997799999999999999997 77777777666554 6799998887543 2
Q ss_pred HHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413 377 ISTHIIELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 377 ~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
+.+.+.+ .++|++|||+|...+++.+
T Consensus 236 --~~~~~~~--~~~D~vid~~g~~~~~~~~ 261 (357)
T PLN02514 236 --AEMQEAA--DSLDYIIDTVPVFHPLEPY 261 (357)
T ss_pred --HHHHHhc--CCCcEEEECCCchHHHHHH
Confidence 2344444 3799999999976665544
No 87
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.84 E-value=1.8e-20 Score=181.79 Aligned_cols=225 Identities=22% Similarity=0.290 Sum_probs=158.6
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR------------------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~------------------- 61 (408)
|+++|||++|++.+. |. .+..+|.++|||++|+|+++|+++..+++||||+..+...
T Consensus 32 v~a~~i~~~D~~~~~-g~---~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~ 107 (375)
T cd08282 32 ITTTAICGSDLHMYR-GR---TGAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVN 107 (375)
T ss_pred EEEEeeCHHHHHHHc-CC---CCCCCCceeccccEEEEEEeCCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCC
Confidence 468999999999884 32 2245689999999999999999999999999998633211
Q ss_pred ------------------------cccCC--cceeccceeeec---ccccCCCCCCcceEEEEeeeee-cCCeEEEEccC
Q psy1413 62 ------------------------NVCLS--PILRRRFSLRFR---EQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHG 111 (408)
Q Consensus 62 ------------------------~~~~~--~~~~~p~~~~~~---~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G 111 (408)
..+.. .++..|+++++. ..+.++.+..+++.+. ....+ .+++++|.|+|
T Consensus 108 ~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~g 186 (375)
T cd08282 108 PGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGAG 186 (375)
T ss_pred cccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECCC
Confidence 11111 344555555553 1233333333333221 11122 47889998999
Q ss_pred ccccccccccccccC-c----------------------------------------ceeEEEccCch------------
Q psy1413 112 QIGDFRLSDPMIVGH-E----------------------------------------ASGIVSKVGAK------------ 138 (408)
Q Consensus 112 ~vG~~~i~~a~~~G~-~----------------------------------------~~~vv~~~g~~------------ 138 (408)
++|++++++++.+|+ . ++.+++++|..
T Consensus 187 ~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~ 266 (375)
T cd08282 187 PVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAIPIDFSDGDPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNL 266 (375)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCeEeccCcccHHHHHHHhhCCCCCEEEECCCCcccccccccchHH
Confidence 999999988887775 1 22334444432
Q ss_pred --HHHHhhccCCcEEEEEccCCC-------------CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCc
Q psy1413 139 --VKHLKATRPGGCLVIVGAGSQ-------------DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKL 202 (408)
Q Consensus 139 --~~~~~~l~~gG~iv~~G~~~~-------------~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~ 202 (408)
.+++++++++|+++.+|.... ...+++..++.++..+.+..... ..+++++++++++++++.++
T Consensus 267 ~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~ 346 (375)
T cd08282 267 VLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGLSFGTGQAPVKKYNRQLRDLILAGRAKPSFV 346 (375)
T ss_pred HHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCcEEEEecCCchhhHHHHHHHHHcCCCChHHc
Confidence 256789999999999886431 13456667788888888876544 67899999999999988778
Q ss_pred eeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 203 ITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 203 i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
++++|+++++++||+.+.+++ ..|++++
T Consensus 347 ~~~~~~l~~~~~a~~~~~~~~--~~kvvv~ 374 (375)
T cd08282 347 VSHVISLEDAPEAYARFDKRL--ETKVVIK 374 (375)
T ss_pred EEEEeeHHHHHHHHHHHhcCC--ceEEEeC
Confidence 999999999999999999876 5577764
No 88
>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase. L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found
Probab=99.84 E-value=6.4e-20 Score=179.87 Aligned_cols=236 Identities=24% Similarity=0.356 Sum_probs=177.1
Q ss_pred ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCcc-cc---ccccccccccCcceeEEEccCchHH-HH
Q psy1413 68 ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQI-GD---FRLSDPMIVGHEASGIVSKVGAKVK-HL 142 (408)
Q Consensus 68 ~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~v-G~---~~i~~a~~~G~~~~~vv~~~g~~~~-~~ 142 (408)
++..|..+.+ +..+.|.+.+.++++.+.++++++.++.++..|.. .. .....+..+|+|+.|+|..+|+..+ .+
T Consensus 7 ~~~~~~~l~~-~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~ 85 (410)
T cd08238 7 RMYGKGDLRL-EKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGKKWQGKY 85 (410)
T ss_pred EEEcCCceEE-EecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCCCccCCC
Confidence 4456667777 66788888888999999999999998875422211 00 0012456789999999999997533 24
Q ss_pred hhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcC
Q psy1413 143 KATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTG 222 (408)
Q Consensus 143 ~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~ 222 (408)
+.
T Consensus 86 ~v------------------------------------------------------------------------------ 87 (410)
T cd08238 86 KP------------------------------------------------------------------------------ 87 (410)
T ss_pred CC------------------------------------------------------------------------------
Confidence 43
Q ss_pred CCCceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccc----eeeeCCCCCCcccccc
Q psy1413 223 AGNAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD----FCHKLPDHVSLEEGAL 298 (408)
Q Consensus 223 ~~~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~ 298 (408)
+|+|+..+...|+.|..|. + ++. ..+|+|++|+.++++ .++++|++++++++++
T Consensus 88 ----------GdrV~~~~~~~c~~~~~c~--------~---~g~-~~~G~~aey~~v~~~~~~~~~~~lP~~l~~~~aal 145 (410)
T cd08238 88 ----------GQRFVIQPALILPDGPSCP--------G---YSY-TYPGGLATYHIIPNEVMEQDCLLIYEGDGYAEASL 145 (410)
T ss_pred ----------CCEEEEcCCcCCCCCCCCC--------C---ccc-cCCCcceEEEEecHHhccCCeEECCCCCCHHHHhh
Confidence 8999888888888877662 1 122 247999999999987 5899999999988887
Q ss_pred cchhhhh---hhhh---------hccCcCCCCEEEEEec-chhHHHHHHHHHHhC--CCeEEEEecChhhHHHHHHc---
Q psy1413 299 LEPLSVG---VHAC---------RRAGVTLGSKVLITGA-GPIGLVTLLTARALG--ASRVVITDILEHKLKTAKEM--- 360 (408)
Q Consensus 299 ~~~~~~~---~~~~---------~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~G--a~~vv~~~~~~~~~~~~~~~--- 360 (408)
+.+++++ +.+. .+..++++++++|+|+ |++|++++|+++.+| +.+|++++++++|++.++++
T Consensus 146 ~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~~~~~~ 225 (410)
T cd08238 146 VEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQRLFPP 225 (410)
T ss_pred cchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHHHhccc
Confidence 6554332 2221 3467889999999997 999999999999975 45699999999999999887
Q ss_pred -----CCC-eEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhcC
Q psy1413 361 -----GAD-ATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLGM 407 (408)
Q Consensus 361 -----ga~-~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~~ 407 (408)
|++ .++++++ .+++.+.++++++++++|++||++|+..+++.++
T Consensus 226 ~~~~~Ga~~~~i~~~~---~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~ 275 (410)
T cd08238 226 EAASRGIELLYVNPAT---IDDLHATLMELTGGQGFDDVFVFVPVPELVEEAD 275 (410)
T ss_pred cccccCceEEEECCCc---cccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHH
Confidence 776 4676543 1457778888888889999999999877766553
No 89
>cd05285 sorbitol_DH Sorbitol dehydrogenase. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.84 E-value=1.3e-20 Score=180.80 Aligned_cols=231 Identities=42% Similarity=0.659 Sum_probs=167.0
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
|.++++|++|++.+..+..+.....+|.++|||++|+|+++|++++++++||+|++.+.
T Consensus 29 v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (343)
T cd05285 29 VRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIEPGVPCRTCEFCKSGRYNLCPDMR 108 (343)
T ss_pred EEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEccccCCCCChhHhCcCcccCcCcc
Confidence 46899999999987433333333356888999999999999999999999999986321
Q ss_pred -------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccC
Q psy1413 60 -------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH 126 (408)
Q Consensus 60 -------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~ 126 (408)
+.......++..|+++++++.+.+ .+..++..+.....-..+++++|.|+|++|++++++++.+|+
T Consensus 109 ~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~~~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~ 187 (343)
T cd05285 109 FAATPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHACRRAGVRPGDTVLVFGAGPIGLLTAAVAKAFGA 187 (343)
T ss_pred ccccccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 122333345555666665333322 222222221111111247889998889999999888887775
Q ss_pred c----------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccC
Q psy1413 127 E----------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAG 157 (408)
Q Consensus 127 ~----------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~ 157 (408)
. ++.++++.|.. ...+++++++|+++.+|..
T Consensus 188 ~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~ 267 (343)
T cd05285 188 TKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIECTGAESCIQTAIYATRPGGTVVLVGMG 267 (343)
T ss_pred cEEEEECCCHHHHHHHHHcCCcEEeccccccchhHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccC
Confidence 3 23334444432 1578899999999999976
Q ss_pred CCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 158 SQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 158 ~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
.....+++..+.++++++.+.+...+.+++++++++++++++.+++.++|+++++.+|++.+.+++...+||+|.
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~ 342 (343)
T cd05285 268 KPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVIE 342 (343)
T ss_pred CCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEEe
Confidence 655666777888999999998776688999999999999876667889999999999999999887777999884
No 90
>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu
Probab=99.84 E-value=2.2e-20 Score=180.63 Aligned_cols=224 Identities=22% Similarity=0.328 Sum_probs=160.0
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------------- 58 (408)
|.++|+|++|++.+. +. ++..+|.++|||++|+|+++|+++..+++||||++.+
T Consensus 34 v~a~gi~~~d~~~~~-g~---~~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (365)
T cd08278 34 IVATGICHTDLVVRD-GG---LPTPLPAVLGHEGAGVVEAVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFP 109 (365)
T ss_pred EEEeecCcccHHHhc-CC---CCCCCCcccccceeEEEEEeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCccc
Confidence 468999999999884 32 2245688999999999999999999999999998532
Q ss_pred ---------------------------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCe
Q psy1413 59 ---------------------------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSD 104 (408)
Q Consensus 59 ---------------------------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~ 104 (408)
++...+.+.++..|+.+++++.++++....+++........+ .+++
T Consensus 110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~ 189 (365)
T cd08278 110 LNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAGAVLNVLKPRPGSS 189 (365)
T ss_pred ccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCCCCCHHHhhhhcchhhhhhHHHhhhcCCCCCCE
Confidence 111222334455566555544444444444443222111222 4788
Q ss_pred EEEEccCccccccccccccccCc------------------------------------------ceeEEEccCch---H
Q psy1413 105 VHYLTHGQIGDFRLSDPMIVGHE------------------------------------------ASGIVSKVGAK---V 139 (408)
Q Consensus 105 vlv~g~G~vG~~~i~~a~~~G~~------------------------------------------~~~vv~~~g~~---~ 139 (408)
++|+|+|++|++++++++.+|++ ++.+++++|.. .
T Consensus 190 vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~~~~g~~~~i~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~ 269 (365)
T cd08278 190 IAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKELGATHVINPKEEDLVAAIREITGGGVDYALDTTGVPAVIE 269 (365)
T ss_pred EEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHH
Confidence 99999999999999988877762 34455555532 2
Q ss_pred HHHhhccCCcEEEEEccC--CCCcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccchHH
Q psy1413 140 KHLKATRPGGCLVIVGAG--SQDVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLEDTL 213 (408)
Q Consensus 140 ~~~~~l~~gG~iv~~G~~--~~~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~ 213 (408)
+++++++++|+++.+|.. .....+++..+..+++++.+.... .+.+++++++++++++++.+++ +.|+++++.
T Consensus 270 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~-~~~~l~~~~ 348 (365)
T cd08278 270 QAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSVPQEFIPRLIELYRQGKFPFDKLV-TFYPFEDIN 348 (365)
T ss_pred HHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcChHHHHHHHHHHHHcCCCChHHhe-EEecHHHHH
Confidence 678999999999999975 345667777777899999887643 1457889999999998765444 479999999
Q ss_pred HHHHHHHcCCCCceEEEE
Q psy1413 214 HAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 214 ~a~~~~~~~~~~~~kvvi 231 (408)
+|++.+.+++ ..|+++
T Consensus 349 ~a~~~~~~~~--~~k~~~ 364 (365)
T cd08278 349 QAIADSESGK--VIKPVL 364 (365)
T ss_pred HHHHHHHCCC--ceEEEE
Confidence 9999998764 457665
No 91
>KOG0025|consensus
Probab=99.84 E-value=8.5e-21 Score=166.77 Aligned_cols=223 Identities=18% Similarity=0.192 Sum_probs=170.1
Q ss_pred CeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCcceeccce
Q psy1413 2 HCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 2 ~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~~p~~ 74 (408)
.|+-||++|+..+++-| + ..+++|.+-|.|++|+|+.+|++|++||+||+|+... ++.....+..+..++.
T Consensus 55 LAaPINPsDIN~IQGvY-p-vrP~~PAVgGnEGv~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~vd~~ 132 (354)
T KOG0025|consen 55 LAAPINPSDINQIQGVY-P-VRPELPAVGGNEGVGEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKVDKD 132 (354)
T ss_pred eecCCChHHhhhhcccc-C-CCCCCCcccCCcceEEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccceEEcCCc
Confidence 47889999999996443 3 3346789999999999999999999999999998544 2334555566666777
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEE-Ec-cCccccccccccccccCc-------------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHY-LT-HGQIGDFRLSDPMIVGHE------------------------- 127 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv-~g-~G~vG~~~i~~a~~~G~~------------------------- 127 (408)
++++.++++....++++.+.-....++..+.+| .| ..++|+..+|+|+++|..
T Consensus 133 ~pl~~AAT~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ 212 (354)
T KOG0025|consen 133 IPLASAATLSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATE 212 (354)
T ss_pred CChhhhheeccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCce
Confidence 777677777777788886655556665444445 45 558999999999999872
Q ss_pred ---------------------ceeEEEccCchH--HHHhhccCCcEEEEEc-cCCCCcccCHHHHHhcCcEEEEeecCC-
Q psy1413 128 ---------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVG-AGSQDVKIPLVLTMTKEIDIRGVFRYA- 182 (408)
Q Consensus 128 ---------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G-~~~~~~~~~~~~~~~~~~~l~g~~~~~- 182 (408)
.-..+.++|... +..+.|.+||+++.+| +...|++++...++||++.++|.|..+
T Consensus 213 ViTeeel~~~~~~k~~~~~~~prLalNcVGGksa~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W 292 (354)
T KOG0025|consen 213 VITEEELRDRKMKKFKGDNPRPRLALNCVGGKSATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRW 292 (354)
T ss_pred EecHHHhcchhhhhhhccCCCceEEEeccCchhHHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeeh
Confidence 223455665443 5689999999999998 788999999999999999999998542
Q ss_pred -----------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceE
Q psy1413 183 -----------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIK 228 (408)
Q Consensus 183 -----------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~k 228 (408)
+.+.++.+|++.|++.... ....+|++...|++...+.....+|
T Consensus 293 ~~~~~~pe~~~~~i~~~~~l~~~G~i~~~~--~e~v~L~~~~tald~~L~~~~~~~K 347 (354)
T KOG0025|consen 293 KKEHKSPEERKEMIDELCDLYRRGKLKAPN--CEKVPLADHKTALDAALSKFGKSGK 347 (354)
T ss_pred hhccCCcHHHHHHHHHHHHHHHcCeecccc--ceeeechhhhHHHHHHHHHhccCCc
Confidence 1257788999999997543 4567999999999887766554333
No 92
>cd08232 idonate-5-DH L-idonate 5-dehydrogenase. L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai
Probab=99.84 E-value=8.4e-20 Score=174.78 Aligned_cols=239 Identities=41% Similarity=0.737 Sum_probs=183.6
Q ss_pred ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 68 ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 68 ~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
++.+++.+.+ +..++|.+.+..+.+.+...+++..++.+.-.|..+......+...|.++.|++..+|.....++.
T Consensus 2 ~~~~~~~~~~-~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~--- 77 (339)
T cd08232 2 VIHAAGDLRV-EERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAP--- 77 (339)
T ss_pred eeccCCceEE-EEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCC---
Confidence 4566778888 556788888888899999999887776543222222211233456789999999999864333333
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 78 -------------------------------------------------------------------------------- 77 (339)
T cd08232 78 -------------------------------------------------------------------------------- 77 (339)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeeccc----CCCCccceeEEeeccceeeeCCCCCCcccccccchhh
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCAT----PPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLS 303 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~ 303 (408)
+++|...+..+|+.|.+|..|.++.|.+..+++. ...+|+|++|+.++++.++++|++++.++++...++.
T Consensus 78 -----Gd~V~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~~~~~~ 152 (339)
T cd08232 78 -----GQRVAVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPLPDGLSLRRAALAEPLA 152 (339)
T ss_pred -----CCEEEEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEECcCCCCHHHhhhcchHH
Confidence 8899888888999999999999999998644442 1247999999999999999999999988887655777
Q ss_pred hhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413 304 VGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE 383 (408)
Q Consensus 304 ~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~ 383 (408)
++++++......+++++||.|+|++|+.++|+++.+|+++++++++++++.+.++++|++.++++++ .+. .+
T Consensus 153 ~a~~~l~~~~~~~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~~~g~~~vi~~~~----~~~----~~ 224 (339)
T cd08232 153 VALHAVNRAGDLAGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVARAMGADETVNLAR----DPL----AA 224 (339)
T ss_pred HHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCCEEEcCCc----hhh----hh
Confidence 8888885554448999999877999999999999999976888888888888889999999998765 332 22
Q ss_pred Hh-cCCCCceEEEcccchhhh
Q psy1413 384 LL-QGEQPDKTIDCSGIESTI 403 (408)
Q Consensus 384 ~~-~~~~~d~i~d~~g~~~~~ 403 (408)
.. ...++|++|||+|+...+
T Consensus 225 ~~~~~~~vd~vld~~g~~~~~ 245 (339)
T cd08232 225 YAADKGDFDVVFEASGAPAAL 245 (339)
T ss_pred hhccCCCccEEEECCCCHHHH
Confidence 22 234699999999865443
No 93
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.84 E-value=1.3e-19 Score=174.06 Aligned_cols=238 Identities=32% Similarity=0.511 Sum_probs=185.7
Q ss_pred eeccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 69 LRRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
+..++.+.. ...+.|.+ .+..++++..+++++..++.+. .|... ........|.++.|++..+|+....++.
T Consensus 6 ~~~~~~~~~-~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~-~g~~~--~~~~~~~~g~e~~G~V~~vG~~v~~~~~--- 78 (347)
T cd05278 6 YLGPGKIGL-EEVPDPKIQGPHDAIVRVTATSICGSDLHIY-RGGVP--GAKHGMILGHEFVGEVVEVGSDVKRLKP--- 78 (347)
T ss_pred EecCCceEE-EEcCCCCCCCCCeEEEEEEEEEechhhHHHH-cCCCC--CCCCCceeccceEEEEEEECCCccccCC---
Confidence 344555555 44566666 6778888888888877665443 12111 1233456889999999999865333333
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 79 -------------------------------------------------------------------------------- 78 (347)
T cd05278 79 -------------------------------------------------------------------------------- 78 (347)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeecc--cCCCCccceeEEeeccc--eeeeCCCCCCcccccccc-hh
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCA--TPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-PL 302 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~~ 302 (408)
+|+|...+..+|+.|.+|.++...+|++..... ....+|+|++|..++++ .++++|++++.++++.++ ..
T Consensus 79 -----Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~ 153 (347)
T cd05278 79 -----GDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDIL 153 (347)
T ss_pred -----CCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchh
Confidence 899988888899999999999999998754321 11246899999999987 899999999988888776 67
Q ss_pred hhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHH
Q psy1413 303 SVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHII 382 (408)
Q Consensus 303 ~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~ 382 (408)
.++++++....+++++++||.|+|++|+.++|+|+.+|+.+++.+++++++.+.++++|++.++++++ .++.+.++
T Consensus 154 ~ta~~~~~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~----~~~~~~i~ 229 (347)
T cd05278 154 PTGFHGAELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLAKEAGATDIINPKN----GDIVEQIL 229 (347)
T ss_pred hheeehhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCc----chHHHHHH
Confidence 88888886678889999999766999999999999999855888888888889999999999999876 56777788
Q ss_pred HHhcCCCCceEEEcccchhh
Q psy1413 383 ELLQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 383 ~~~~~~~~d~i~d~~g~~~~ 402 (408)
+.+.++++|++||++|+...
T Consensus 230 ~~~~~~~~d~vld~~g~~~~ 249 (347)
T cd05278 230 ELTGGRGVDCVIEAVGFEET 249 (347)
T ss_pred HHcCCCCCcEEEEccCCHHH
Confidence 88777899999999987433
No 94
>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall
Probab=99.83 E-value=2.1e-20 Score=180.68 Aligned_cols=224 Identities=21% Similarity=0.296 Sum_probs=159.1
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
+.++++|++|++.+. +. ....+|.++|||++|+|+++|++++.+++||||+..+.
T Consensus 32 v~~~~i~~~d~~~~~-g~---~~~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (365)
T cd05279 32 VVATGVCHTDLHVID-GK---LPTPLPVILGHEGAGIVESIGPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSR 107 (365)
T ss_pred EEEeeecchhHHHhc-CC---CCCCCCcccccceeEEEEEeCCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcc
Confidence 458999999999885 32 23456889999999999999999999999999987532
Q ss_pred ---------------------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeE
Q psy1413 60 ---------------------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDV 105 (408)
Q Consensus 60 ---------------------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~v 105 (408)
+.......++..|+++++++.+.++.++.+++.+...... ..++++
T Consensus 108 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~a~~~~~~~~ta~~al~~~~~~~~g~~v 187 (365)
T cd05279 108 GTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTC 187 (365)
T ss_pred cccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHHhhHhccchhHHHHHHHhccCCCCCCEE
Confidence 1122233444555555554344444344333321111112 247899
Q ss_pred EEEccCccccccccccccccCc--------------------------------------------ceeEEEccCch---
Q psy1413 106 HYLTHGQIGDFRLSDPMIVGHE--------------------------------------------ASGIVSKVGAK--- 138 (408)
Q Consensus 106 lv~g~G~vG~~~i~~a~~~G~~--------------------------------------------~~~vv~~~g~~--- 138 (408)
+|+|+|++|++++++++.+|+. ++.+++++|..
T Consensus 188 lI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~ 267 (365)
T cd05279 188 AVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTL 267 (365)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHH
Confidence 9999999999998888877752 22334444321
Q ss_pred HHHHhhcc-CCcEEEEEccCC--CCcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413 139 VKHLKATR-PGGCLVIVGAGS--QDVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLED 211 (408)
Q Consensus 139 ~~~~~~l~-~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~ 211 (408)
.+++++++ ++|+++.+|... ....++...+ .++.++.|.+.. ...+.+++++++++++++.++++++|+++|
T Consensus 268 ~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~l~g~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~ 346 (365)
T cd05279 268 KQALDATRLGGGTSVVVGVPPSGTEATLDPNDL-LTGRTIKGTVFGGWKSKDSVPKLVALYRQKKFPLDELITHVLPFEE 346 (365)
T ss_pred HHHHHHhccCCCEEEEEecCCCCCceeeCHHHH-hcCCeEEEEeccCCchHhHHHHHHHHHHcCCcchhHheeeeecHHH
Confidence 15688999 999999999754 4566777677 788888887643 367899999999999998888999999999
Q ss_pred HHHHHHHHHcCCCCceEEEE
Q psy1413 212 TLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 212 ~~~a~~~~~~~~~~~~kvvi 231 (408)
+++||+.+.+++ ..|+++
T Consensus 347 ~~~a~~~~~~~~--~~~~~~ 364 (365)
T cd05279 347 INDGFDLMRSGE--SIRTIL 364 (365)
T ss_pred HHHHHHHHhCCC--ceeeee
Confidence 999999988653 345544
No 95
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.83 E-value=1.1e-19 Score=177.82 Aligned_cols=167 Identities=24% Similarity=0.216 Sum_probs=141.6
Q ss_pred cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-
Q psy1413 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR- 310 (408)
Q Consensus 233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~- 310 (408)
+++|...+..+|++|+.|..+++++|.....+|....+|+|++|+.++++.++++|++++.++++.+. ...++++++.
T Consensus 102 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~ 181 (398)
T TIGR01751 102 GDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVG 181 (398)
T ss_pred CCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhh
Confidence 89998888889999999999999999887777765678999999999999999999999988887666 6677888764
Q ss_pred --ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC---------------
Q psy1413 311 --RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH--------------- 372 (408)
Q Consensus 311 --~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~--------------- 372 (408)
...++++++++|+|+ |++|++++|+++.+|++ ++.+++++++.+.++++|++.++|+++..
T Consensus 182 ~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~-vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~ 260 (398)
T TIGR01751 182 WNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGN-PVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKE 260 (398)
T ss_pred hhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccch
Confidence 367889999999999 99999999999999998 67777888899999999999999875420
Q ss_pred ---ChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 373 ---SLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 373 ---~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
......+.+.+++.++++|++|||+|..
T Consensus 261 ~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~ 291 (398)
T TIGR01751 261 WTKSFKRFGKRIRELTGGEDPDIVFEHPGRA 291 (398)
T ss_pred hhhcchhHHHHHHHHcCCCCceEEEECCcHH
Confidence 0123556777888778999999999864
No 96
>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH). Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo
Probab=99.83 E-value=1.5e-19 Score=175.41 Aligned_cols=234 Identities=30% Similarity=0.511 Sum_probs=181.8
Q ss_pred eeccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 69 LRRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
+..|+.+.. +..++|.+ .+..+++.+.++++++.++.+. .|... .......|.++.|++..+|...+.++.
T Consensus 6 ~~~~~~~~~-~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~-~g~~~---~~~p~~~g~e~~G~V~~vG~~v~~~~~--- 77 (375)
T cd08282 6 YGGPGNVAV-EDVPDPKIEHPTDAIVRITTTAICGSDLHMY-RGRTG---AEPGLVLGHEAMGEVEEVGSAVESLKV--- 77 (375)
T ss_pred EecCCceeE-EeCCCCCCCCCCeEEEEEEEEeeCHHHHHHH-cCCCC---CCCCceeccccEEEEEEeCCCCCcCCC---
Confidence 445666777 66677774 6788888999999987766553 12111 223556799999999999865333333
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 78 -------------------------------------------------------------------------------- 77 (375)
T cd08282 78 -------------------------------------------------------------------------------- 77 (375)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCcccccccee---------ecccCCCCccceeEEeeccc--eeeeCCCCCCcc--
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIF---------FCATPPDHGNLSRYYRHAAD--FCHKLPDHVSLE-- 294 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~-- 294 (408)
+++|+..+..+|+.|..|..++.++|.+.. +++....+|+|++|..++.+ .++++|++++.+
T Consensus 78 -----Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~ 152 (375)
T cd08282 78 -----GDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEK 152 (375)
T ss_pred -----CCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhh
Confidence 899988888899999999999999997521 12223357999999999976 899999999987
Q ss_pred -cccccc-hhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCC
Q psy1413 295 -EGALLE-PLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNH 372 (408)
Q Consensus 295 -~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~ 372 (408)
.++.+. .+.++++++....++++++++|.|+|++|++++|+++.+|+++|++++++++|.+.++++|++ .+++++
T Consensus 153 ~~~a~~~~~~~ta~~a~~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~~~g~~-~v~~~~-- 229 (375)
T cd08282 153 DDYLMLSDIFPTGWHGLELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLAESIGAI-PIDFSD-- 229 (375)
T ss_pred hheeeecchHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHcCCe-EeccCc--
Confidence 344444 678899988778889999999987799999999999999997788898999999999999984 566655
Q ss_pred ChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 373 SLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 373 ~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
++..+.+++++. +++|++|||+|+..
T Consensus 230 --~~~~~~i~~~~~-~~~d~v~d~~g~~~ 255 (375)
T cd08282 230 --GDPVEQILGLEP-GGVDRAVDCVGYEA 255 (375)
T ss_pred --ccHHHHHHHhhC-CCCCEEEECCCCcc
Confidence 566677777776 68999999999763
No 97
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.83 E-value=1.7e-20 Score=180.27 Aligned_cols=227 Identities=18% Similarity=0.206 Sum_probs=163.5
Q ss_pred CCeeeecccchhhhhcCCCCC------------------CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---
Q psy1413 1 MHCVGICGSDVHYLTHGQIGD------------------FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~------------------~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--- 59 (408)
|.++|+|++|++.+ .|.++. ...++|.++|||++|+|+++|+++++|++||||+..+.
T Consensus 35 v~~~~~~~~d~~~~-~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~ 113 (350)
T cd08274 35 VGACGVNNTDINTR-EGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVAVGEGVDTARIGERVLVDPSIRD 113 (350)
T ss_pred EEeccCCHHHHHHh-cCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEEeCCCCCCCCCCCEEEEecCcCC
Confidence 46899999999987 332210 12457899999999999999999999999999987431
Q ss_pred ----------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-Ccccc
Q psy1413 60 ----------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGD 115 (408)
Q Consensus 60 ----------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~ 115 (408)
+...+...++..|+++++.+.+.++....+++.+. ....+ .+++++|+|+ |++|+
T Consensus 114 ~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~ 192 (350)
T cd08274 114 PPEDDPADIDYIGSERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGS 192 (350)
T ss_pred CCccccccccccCCCCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHH
Confidence 12233334555666666644455555444443221 11222 4789999996 99999
Q ss_pred ccccccccccCcc---------------------------------------eeEEEccCch--HHHHhhccCCcEEEEE
Q psy1413 116 FRLSDPMIVGHEA---------------------------------------SGIVSKVGAK--VKHLKATRPGGCLVIV 154 (408)
Q Consensus 116 ~~i~~a~~~G~~~---------------------------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~ 154 (408)
+++++++.+|+.. +.+++++|.. ..++++++++|+++.+
T Consensus 193 ~~~~~a~~~g~~vi~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~ 272 (350)
T cd08274 193 ALVQLAKRRGAIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTA 272 (350)
T ss_pred HHHHHHHhcCCEEEEEeCchhhHHHHhcCCeEEEeCCCccHHHHHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEe
Confidence 9999888777642 2233333321 1578999999999999
Q ss_pred ccCCCC-cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 155 GAGSQD-VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 155 G~~~~~-~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
|..... ..++...++.+++++.++.... ..++++++++.+++++ ++++++|+++++.++|+.+..++ ...|++++
T Consensus 273 g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~-~~~kvvi~ 349 (350)
T cd08274 273 GAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRYIEEGEIR--PVVAKTFPLSEIREAQAEFLEKR-HVGKLVLV 349 (350)
T ss_pred cccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHHHHCCCcc--cccccccCHHHHHHHHHHHhcCC-CceEEEEe
Confidence 965444 6777888889999999988765 7799999999999875 45889999999999999998754 45566654
No 98
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.83 E-value=2.1e-19 Score=171.98 Aligned_cols=233 Identities=40% Similarity=0.673 Sum_probs=185.1
Q ss_pred cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413 72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL 151 (408)
Q Consensus 72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i 151 (408)
+..+.+ ...++|.+.+..+.+.+.+++++..++.+.- |.... .......|.++.|++..+|...+.++.
T Consensus 9 ~~~~~~-~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~-~~~~~--~~~~~~~g~e~~G~V~~~G~~v~~~~~------- 77 (337)
T cd08261 9 PGRLEV-VDIPEPVPGAGEVLVRVKRVGICGSDLHIYH-GRNPF--ASYPRILGHELSGEVVEVGEGVAGLKV------- 77 (337)
T ss_pred CCceEE-EECCCCCCCCCeEEEEEEEEeEcccChHHHc-CCCCc--CCCCcccccccEEEEEEeCCCCCCCCC-------
Confidence 345555 5567777778888889999999877765532 11111 122456789999999999864333333
Q ss_pred EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
T Consensus 78 -------------------------------------------------------------------------------- 77 (337)
T cd08261 78 -------------------------------------------------------------------------------- 77 (337)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhc
Q psy1413 232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRR 311 (408)
Q Consensus 232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~ 311 (408)
+|+|+..+..+|+.|..|..++++.|...+.++.. ..|+|++|+.++++ ++++|+++++++++.+.++.++++.+..
T Consensus 78 -Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~~~~~~a~~~~~~ 154 (337)
T cd08261 78 -GDRVVVDPYISCGECYACRKGRPNCCENLQVLGVH-RDGGFAEYIVVPAD-ALLVPEGLSLDQAALVEPLAIGAHAVRR 154 (337)
T ss_pred -CCEEEECCCCCCCCChhhhCcCcccCCCCCeeeec-CCCcceeEEEechh-eEECCCCCCHHHhhhhchHHHHHHHHHh
Confidence 88998877889999999999999999765554432 47999999999999 9999999999888876677777777766
Q ss_pred cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413 312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391 (408)
Q Consensus 312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d 391 (408)
..+++++++||+|+|++|+.++|+|+.+|++ ++++.+++++.+.++++|+++++++++ .++.+.+.+++.++++|
T Consensus 155 ~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~~-v~~~~~s~~~~~~~~~~g~~~v~~~~~----~~~~~~l~~~~~~~~vd 229 (337)
T cd08261 155 AGVTAGDTVLVVGAGPIGLGVIQVAKARGAR-VIVVDIDDERLEFARELGADDTINVGD----EDVAARLRELTDGEGAD 229 (337)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEECCCHHHHHHHHHhCCCEEecCcc----cCHHHHHHHHhCCCCCC
Confidence 7889999999997799999999999999998 888888889999999999999999876 56777788888778899
Q ss_pred eEEEcccchhhh
Q psy1413 392 KTIDCSGIESTI 403 (408)
Q Consensus 392 ~i~d~~g~~~~~ 403 (408)
++|||+|+....
T Consensus 230 ~vld~~g~~~~~ 241 (337)
T cd08261 230 VVIDATGNPASM 241 (337)
T ss_pred EEEECCCCHHHH
Confidence 999999875443
No 99
>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like. This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (
Probab=99.83 E-value=2.5e-19 Score=171.90 Aligned_cols=240 Identities=31% Similarity=0.531 Sum_probs=186.1
Q ss_pred eeccceeeecccccCCCC-CCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccC
Q psy1413 69 LRRRFSLRFREQKPIEDP-DDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRP 147 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~-~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~ 147 (408)
+..++.+.+ +..++|.+ ....+++++.+++++..++.+.- |... ........|.++.|.+..+|+....++.
T Consensus 6 ~~~~~~~~~-~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~V~~~G~~v~~~~~--- 78 (345)
T cd08286 6 YHGPGKISW-EDRPKPTIQEPTDAIVKMLKTTICGTDLHILK-GDVP--TVTPGRILGHEGVGVVEEVGSAVTNFKV--- 78 (345)
T ss_pred EecCCceeE-EecCCCCCCCCCeEEEEEEEeeecchhhHHHc-CCCC--CCCCCceecccceEEEEEeccCccccCC---
Confidence 334455666 55677764 56788888999999877765542 2111 1123456789999999998864333333
Q ss_pred CcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 148 GGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 148 gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
T Consensus 79 -------------------------------------------------------------------------------- 78 (345)
T cd08286 79 -------------------------------------------------------------------------------- 78 (345)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccc--eeeeCCCCCCcccccccc-hhhh
Q psy1413 228 KVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-PLSV 304 (408)
Q Consensus 228 kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~~~~ 304 (408)
+|+|+..+...|++|.+|..+.++.|....++.....+|+|++|+.++++ .++++|++++..+++.+. ...+
T Consensus 79 -----Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~t 153 (345)
T cd08286 79 -----GDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPT 153 (345)
T ss_pred -----CCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHH
Confidence 89998888888999999999999999876554333457999999999987 899999999988888776 5567
Q ss_pred hhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413 305 GVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE 383 (408)
Q Consensus 305 ~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~ 383 (408)
+++.+ ....+++++++||+|+|++|++++|+++.+|+.+++++++++++.+.++++|++.++++++ .+..+.+.+
T Consensus 154 a~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~----~~~~~~i~~ 229 (345)
T cd08286 154 GYECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKKLGATHTVNSAK----GDAIEQVLE 229 (345)
T ss_pred HHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHhCCCceecccc----ccHHHHHHH
Confidence 77754 5667899999999877999999999999999656888888899999999999999999876 456667777
Q ss_pred HhcCCCCceEEEcccchhhhh
Q psy1413 384 LLQGEQPDKTIDCSGIESTIK 404 (408)
Q Consensus 384 ~~~~~~~d~i~d~~g~~~~~~ 404 (408)
++.++++|++|||+|+...++
T Consensus 230 ~~~~~~~d~vld~~g~~~~~~ 250 (345)
T cd08286 230 LTDGRGVDVVIEAVGIPATFE 250 (345)
T ss_pred HhCCCCCCEEEECCCCHHHHH
Confidence 777788999999998755543
No 100
>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2. Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical
Probab=99.83 E-value=7.6e-20 Score=175.42 Aligned_cols=226 Identities=23% Similarity=0.332 Sum_probs=166.1
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR------------------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~------------------- 61 (408)
|+++++|++|++.+. +. ++..+|.++|||++|+|+++|++|+.+++||+|+..+...
T Consensus 32 v~~~~i~~~d~~~~~-g~---~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (344)
T cd08284 32 VTAAAICGSDLHIYR-GH---IPSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGG 107 (344)
T ss_pred EEEeeccccchhhhc-CC---CCCCCCcccccceEEEEEeeCCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCc
Confidence 468999999999874 32 3345688999999999999999999999999998754111
Q ss_pred ------------------cccC--CcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCcccccccccc
Q psy1413 62 ------------------NVCL--SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDP 121 (408)
Q Consensus 62 ------------------~~~~--~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a 121 (408)
.... ..++..|+++++++.+.++..+.+++.+.....-..++.++|+|+|.+|+++++++
T Consensus 108 ~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a 187 (344)
T cd08284 108 LFGYAGSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTGYFGAKRAQVRPGDTVAVIGCGPVGLCAVLSA 187 (344)
T ss_pred cccccccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHHHhhhHhcCCccCCEEEEECCcHHHHHHHHHH
Confidence 1111 36667777777755666666666665433222222578899999999999999988
Q ss_pred ccccC-c-----------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEcc
Q psy1413 122 MIVGH-E-----------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGA 156 (408)
Q Consensus 122 ~~~G~-~-----------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~ 156 (408)
+.+|+ . ++.++++++.. ...+++++++|+++.+|.
T Consensus 188 ~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~ 267 (344)
T cd08284 188 QVLGAARVFAVDPVPERLERAAALGAEPINFEDAEPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGV 267 (344)
T ss_pred HHcCCceEEEEcCCHHHHHHHHHhCCeEEecCCcCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECc
Confidence 88874 2 22233333321 156899999999999997
Q ss_pred CC-CCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 157 GS-QDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 157 ~~-~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
.. ....++....+.+++++.+..... ..+++++++++++++++.++++++|++++++++|+.+.+++. .|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~--~k~Vi~ 343 (344)
T cd08284 268 HTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV--LKVVLD 343 (344)
T ss_pred CCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc--eEEEec
Confidence 65 344555666778889987654333 789999999999999877788999999999999999887544 677764
No 101
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.83 E-value=2.3e-20 Score=178.56 Aligned_cols=224 Identities=21% Similarity=0.239 Sum_probs=160.1
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------------- 58 (408)
|.++|||++|++.+. +.+ ...++|.++|||++|+|+++|++++.|++||+|++.+
T Consensus 31 v~a~~i~~~d~~~~~-g~~--~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (337)
T cd05283 31 ITYCGVCHSDLHTLR-NEW--GPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKG 107 (337)
T ss_pred EEEecccchHHHHhc-CCc--CCCCCCcccCcceeeEEEEECCCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcch
Confidence 468999999999884 332 2345689999999999999999999999999997421
Q ss_pred -------------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCcccccccc
Q psy1413 59 -------------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLS 119 (408)
Q Consensus 59 -------------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~ 119 (408)
++...+...++..|+++++++.+.++....+++.+.....-..+++++|.|+|.+|+++++
T Consensus 108 ~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~~~~~~~~~~g~~vlV~g~g~vG~~~~~ 187 (337)
T cd05283 108 VVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGVGPGKRVGVVGIGGLGHLAVK 187 (337)
T ss_pred hhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHHHHHhcCCCCCCEEEEECCcHHHHHHHH
Confidence 1112223344455555555433434333333332111111124778999889999998888
Q ss_pred ccccccC-------------------------------------cceeEEEccCch---HHHHhhccCCcEEEEEccCCC
Q psy1413 120 DPMIVGH-------------------------------------EASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQ 159 (408)
Q Consensus 120 ~a~~~G~-------------------------------------~~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~ 159 (408)
+++.+|+ .++.++++++.. .+.+++++++|+++.+|....
T Consensus 188 ~a~~~G~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 267 (337)
T cd05283 188 FAKALGAEVTAFSRSPSKKEDALKLGADEFIATKDPEAMKKAAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEE 267 (337)
T ss_pred HHHHcCCeEEEEcCCHHHHHHHHHcCCcEEecCcchhhhhhccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCC
Confidence 8876664 134455555533 367899999999999998766
Q ss_pred CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 160 DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
...++...++.+++++.+.+... +++++++++++++++++ . .+.|+++++++||+.+++++. .+|+|+
T Consensus 268 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~--~-~~~~~~~~~~~a~~~~~~~~~-~~k~v~ 336 (337)
T cd05283 268 PLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKP--W-VEVIPMDGINEALERLEKGDV-RYRFVL 336 (337)
T ss_pred CCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCcc--c-eEEEEHHHHHHHHHHHHcCCC-cceEee
Confidence 55777778888999999988766 78999999999999864 3 478999999999999998754 456654
No 102
>PRK05396 tdh L-threonine 3-dehydrogenase; Validated
Probab=99.83 E-value=3.6e-20 Score=177.50 Aligned_cols=229 Identities=24% Similarity=0.360 Sum_probs=158.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
++++++|++|++++..+........+|.++|||++|+|+++|++++.+++||+|+..+.+
T Consensus 32 v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (341)
T PRK05396 32 VKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTK 111 (341)
T ss_pred EEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcc
Confidence 468999999999874332222233578899999999999999999999999999875322
Q ss_pred -------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCc
Q psy1413 61 -------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE 127 (408)
Q Consensus 61 -------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~ 127 (408)
...+...++..|+++++++.+ ...++..+...... ....+++++|.++|.+|++++++++.+|+.
T Consensus 112 ~~~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~-~~~~~~~~~~~~~~-~~~~g~~vlV~~~g~vg~~~~~la~~~G~~ 189 (341)
T PRK05396 112 GVGVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAA-IFDPFGNAVHTALS-FDLVGEDVLITGAGPIGIMAAAVAKHVGAR 189 (341)
T ss_pred eeeecCCCcceeeEEechHHeEECcCCCCHHHhH-hhhHHHHHHHHHHc-CCCCCCeEEEECCCHHHHHHHHHHHHcCCC
Confidence 122223344455555542222 22221111110011 123588999988999999998888877752
Q ss_pred -------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCc
Q psy1413 128 -------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDV 161 (408)
Q Consensus 128 -------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~ 161 (408)
++.++++.|+. ...+++++++|+++.+|......
T Consensus 190 ~v~~~~~~~~~~~~~~~lg~~~~~~~~~~~~~~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~ 269 (341)
T PRK05396 190 HVVITDVNEYRLELARKMGATRAVNVAKEDLRDVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDM 269 (341)
T ss_pred EEEEEcCCHHHHHHHHHhCCcEEecCccccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC
Confidence 22233334322 15688999999999999876666
Q ss_pred ccCHHHHHhcCcEEEEeecCC--CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 162 KIPLVLTMTKEIDIRGVFRYA--NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 162 ~~~~~~~~~~~~~l~g~~~~~--~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
+++...+.++++++.+..... ..+..++++++++ +++.+++.+.|+++++.+||+.+.+++ .+|++++++
T Consensus 270 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~l~~~~~a~~~~~~~~--~gk~vv~~~ 341 (341)
T PRK05396 270 AIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSG-LDLSPIITHRFPIDDFQKGFEAMRSGQ--SGKVILDWD 341 (341)
T ss_pred cccHHHHhhcceEEEEEEccCccchHHHHHHHHHcC-CChhHheEEEEeHHHHHHHHHHHhcCC--CceEEEecC
Confidence 666677889999998875332 4567789999998 656677899999999999999998764 588888764
No 103
>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically
Probab=99.82 E-value=8e-20 Score=177.04 Aligned_cols=225 Identities=21% Similarity=0.245 Sum_probs=149.8
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR------------------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~------------------- 61 (408)
|.++|||++|++.+. |. .+..+|+++|||++|+|+++|++++.+++||||+..+...
T Consensus 39 v~~~gi~~~D~~~~~-g~---~~~~~p~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~ 114 (373)
T cd08299 39 IVATGICRSDDHVVS-GK---LVTPFPVILGHEAAGIVESVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKND 114 (373)
T ss_pred EEEEEcCcccHHHhc-CC---CCCCCCccccccceEEEEEeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcc
Confidence 468999999999984 33 2346789999999999999999999999999998753211
Q ss_pred -----------------------------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeE
Q psy1413 62 -----------------------------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDV 105 (408)
Q Consensus 62 -----------------------------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~v 105 (408)
..+...++..|+.+++++.+.++.++.+++.+......+ .++++
T Consensus 115 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~V 194 (373)
T cd08299 115 LGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTC 194 (373)
T ss_pred cccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCChHHhheeccchHHHHHHHHhccCCCCCCEE
Confidence 111222333344444433333332333322111111122 47889
Q ss_pred EEEccCccccccccccccccC-c-------------------------------------------ceeEEEccCchH--
Q psy1413 106 HYLTHGQIGDFRLSDPMIVGH-E-------------------------------------------ASGIVSKVGAKV-- 139 (408)
Q Consensus 106 lv~g~G~vG~~~i~~a~~~G~-~-------------------------------------------~~~vv~~~g~~~-- 139 (408)
+|+|+|++|++++++++.+|+ . ++.+++++|...
T Consensus 195 lV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a~~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~ 274 (373)
T cd08299 195 AVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTM 274 (373)
T ss_pred EEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHHcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHH
Confidence 999999999998888777665 1 223444444321
Q ss_pred -HHHhhc-cCCcEEEEEccCCCC--cccCHHHHHhcCcEEEEeecCC----CcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413 140 -KHLKAT-RPGGCLVIVGAGSQD--VKIPLVLTMTKEIDIRGVFRYA----NDYPIALAMVASGKVDVKKLITHNYLLED 211 (408)
Q Consensus 140 -~~~~~l-~~gG~iv~~G~~~~~--~~~~~~~~~~~~~~l~g~~~~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~ 211 (408)
++++.+ +++|+++.+|..... .+++.. .+.++.++.+.+... .++.++++++.++.++++++++++|+++|
T Consensus 275 ~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e 353 (373)
T cd08299 275 KAALASCHEGYGVSVIVGVPPSSQNLSINPM-LLLTGRTWKGAVFGGWKSKDSVPKLVADYMAKKFNLDPLITHTLPFEK 353 (373)
T ss_pred HHHHHhhccCCCEEEEEccCCCCceeecCHH-HHhcCCeEEEEEecCCccHHHHHHHHHHHHcCCCCchhheeeeecHHH
Confidence 334444 579999999976543 344443 345778888876542 46778888888888888888999999999
Q ss_pred HHHHHHHHHcCCCCceEEEEE
Q psy1413 212 TLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 212 ~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+.+||+.+.+++ ..|++++
T Consensus 354 ~~~a~~~~~~~~--~~k~~~~ 372 (373)
T cd08299 354 INEGFDLLRSGK--SIRTVLT 372 (373)
T ss_pred HHHHHHHHhCCC--cceEEEe
Confidence 999999988754 3566653
No 104
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.82 E-value=2.1e-19 Score=170.59 Aligned_cols=223 Identities=26% Similarity=0.451 Sum_probs=180.0
Q ss_pred eccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCc
Q psy1413 70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGG 149 (408)
Q Consensus 70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG 149 (408)
..+..+.+ ...++|.+.+..+++++.+.+++..++.+. .|.. ..+...|.++.|++..+|+. +..
T Consensus 7 ~~~~~~~~-~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~-~g~~-----~~~~~~G~e~~G~Vv~~G~~---~~~----- 71 (319)
T cd08242 7 DGGLDLRV-EDLPKPEPPPGEALVRVLLAGICNTDLEIY-KGYY-----PFPGVPGHEFVGIVEEGPEA---ELV----- 71 (319)
T ss_pred eCCCcEEE-EECCCCCCCCCeEEEEEEEEEEccccHHHH-cCCC-----CCCCccCceEEEEEEEeCCC---CCC-----
Confidence 33445666 567788888888999999999987776554 2221 13456799999999999863 222
Q ss_pred EEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEE
Q psy1413 150 CLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKV 229 (408)
Q Consensus 150 ~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kv 229 (408)
T Consensus 72 -------------------------------------------------------------------------------- 71 (319)
T cd08242 72 -------------------------------------------------------------------------------- 71 (319)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhh
Q psy1413 230 MIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC 309 (408)
Q Consensus 230 vi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~ 309 (408)
+|+|...+..+|+.|.+|..+.+++|.+...++....+|+|++|..++.+.++++|++++.++++.+.++.+++..+
T Consensus 72 ---G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~~~~~~ 148 (319)
T cd08242 72 ---GKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFAEPLAAALEIL 148 (319)
T ss_pred ---CCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhhhHHHHHHHHH
Confidence 89998888889999999999999999998877765568999999999999999999999988877644455556556
Q ss_pred hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413 310 RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389 (408)
Q Consensus 310 ~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (408)
+...++++++++|+|+|++|++++|+++.+|++ ++++++++++.+.++++|++.++++++ . +.+++
T Consensus 149 ~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~~~~~~----~---------~~~~~ 214 (319)
T cd08242 149 EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPD-VVLVGRHSEKLALARRLGVETVLPDEA----E---------SEGGG 214 (319)
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEeCccc----c---------ccCCC
Confidence 777889999999997799999999999999999 888888899999999999998887643 1 35678
Q ss_pred CceEEEcccchhhhh
Q psy1413 390 PDKTIDCSGIESTIK 404 (408)
Q Consensus 390 ~d~i~d~~g~~~~~~ 404 (408)
+|.+|||+|+...+.
T Consensus 215 ~d~vid~~g~~~~~~ 229 (319)
T cd08242 215 FDVVVEATGSPSGLE 229 (319)
T ss_pred CCEEEECCCChHHHH
Confidence 999999998755443
No 105
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.82 E-value=2.6e-19 Score=171.62 Aligned_cols=235 Identities=38% Similarity=0.659 Sum_probs=186.4
Q ss_pred cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413 72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL 151 (408)
Q Consensus 72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i 151 (408)
+..+.+ ...++|...+..+++++.+++++..++.+.- |..+ ........|.++.|++..+|+..+.++.
T Consensus 9 ~~~~~~-~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~-g~~~--~~~~~~~~g~~~~G~V~~~G~~v~~~~~------- 77 (343)
T cd08235 9 PNDVRL-EEVPVPEPGPGEVLVKVRACGICGTDVKKIR-GGHT--DLKPPRILGHEIAGEIVEVGDGVTGFKV------- 77 (343)
T ss_pred CCceEE-EEccCCCCCCCeEEEEEEEeeeccccHHHHc-CCCc--cCCCCcccccceEEEEEeeCCCCCCCCC-------
Confidence 334555 4456666667778888888888877665531 1111 1123446789999999999865333333
Q ss_pred EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
T Consensus 78 -------------------------------------------------------------------------------- 77 (343)
T cd08235 78 -------------------------------------------------------------------------------- 77 (343)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccce-----eeeCCCCCCcccccccchhhhhh
Q psy1413 232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADF-----CHKLPDHVSLEEGALLEPLSVGV 306 (408)
Q Consensus 232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~p~~~~~~~aa~~~~~~~~~ 306 (408)
+|+|...+..+|++|..|..++.++|.+..+++.. .+|+|++|+.++++. ++++|++++..+++.+.++.+++
T Consensus 78 -Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~~~~~~a~ 155 (343)
T cd08235 78 -GDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNL-YDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALVEPLACCI 155 (343)
T ss_pred -CCEEEEccCCCCCCChHHHCcCcccCCCcceeccC-CCCcceeeEEecccccccccEEECCCCCCHHHHHhhhHHHHHH
Confidence 88998888888999999999999999988776653 579999999999998 99999999988887666777888
Q ss_pred hhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413 307 HACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ 386 (408)
Q Consensus 307 ~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~ 386 (408)
+++....++++++++|+|+|++|+.++|+++.+|++.++++++++++.+.++++|++.++++++ .++.+.+++.+.
T Consensus 156 ~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~----~~~~~~i~~~~~ 231 (343)
T cd08235 156 NAQRKAGIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAE----EDLVEKVRELTD 231 (343)
T ss_pred HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEecCCc----cCHHHHHHHHhC
Confidence 8886668899999999977999999999999999997788888889998888999999998876 566677777787
Q ss_pred CCCCceEEEcccchhhh
Q psy1413 387 GEQPDKTIDCSGIESTI 403 (408)
Q Consensus 387 ~~~~d~i~d~~g~~~~~ 403 (408)
++++|++|||+|+....
T Consensus 232 ~~~vd~vld~~~~~~~~ 248 (343)
T cd08235 232 GRGADVVIVATGSPEAQ 248 (343)
T ss_pred CcCCCEEEECCCChHHH
Confidence 78899999999965443
No 106
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.82 E-value=2.7e-19 Score=172.91 Aligned_cols=233 Identities=32% Similarity=0.540 Sum_probs=181.4
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV 154 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~ 154 (408)
+.+ ...++|.+.+..+.+.+.+++++..++.+. .|..+ .......|.++.|++..+|.....++.
T Consensus 13 ~~~-~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~-~g~~~---~~~~~~~g~e~~G~V~~vG~~v~~~~~---------- 77 (363)
T cd08279 13 LEI-EEVELDDPGPGEVLVRIAAAGLCHSDLHVV-TGDLP---APLPAVLGHEGAGVVEEVGPGVTGVKP---------- 77 (363)
T ss_pred ceE-EEeeCCCCCCCeEEEEEEEeecCcHHHHHh-cCCCC---CCCCccccccceEEEEEeCCCccccCC----------
Confidence 344 445667777778888888888877665543 22222 122346788999999998865333333
Q ss_pred ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
++
T Consensus 78 ------------------------------------------------------------------------------Gd 79 (363)
T cd08279 78 ------------------------------------------------------------------------------GD 79 (363)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 89
Q ss_pred ceeecCCCcccccccccCCccccccceeec--cc-------------C----CCCccceeEEeeccceeeeCCCCCCccc
Q psy1413 235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFC--AT-------------P----PDHGNLSRYYRHAADFCHKLPDHVSLEE 295 (408)
Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~-------------~----~~~g~~~~~~~~~~~~~~~~p~~~~~~~ 295 (408)
+|...+..+|++|.+|.+++.+.|.+.... +. . ...|+|++|+.++++.++++|+++++++
T Consensus 80 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~ 159 (363)
T cd08279 80 HVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR 159 (363)
T ss_pred EEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence 998888889999999999999999765321 10 0 1358999999999999999999999988
Q ss_pred ccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCC
Q psy1413 296 GALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHS 373 (408)
Q Consensus 296 aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~ 373 (408)
++.++ .+.++++++ ....++++++++|+|+|++|++++++++.+|+++|+.+++++++.+.++++|++++++.+.
T Consensus 160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~--- 236 (363)
T cd08279 160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASE--- 236 (363)
T ss_pred eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCC---
Confidence 88777 566777775 5577899999999966999999999999999987888889999999999999999998776
Q ss_pred hHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413 374 LEEISTHIIELLQGEQPDKTIDCSGIESTIK 404 (408)
Q Consensus 374 ~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~ 404 (408)
.+..+.+++++.++++|++||++|+.....
T Consensus 237 -~~~~~~l~~~~~~~~vd~vld~~~~~~~~~ 266 (363)
T cd08279 237 -DDAVEAVRDLTDGRGADYAFEAVGRAATIR 266 (363)
T ss_pred -ccHHHHHHHHcCCCCCCEEEEcCCChHHHH
Confidence 566677777776778999999999654433
No 107
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.82 E-value=2.9e-20 Score=178.37 Aligned_cols=227 Identities=14% Similarity=0.087 Sum_probs=161.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccC--CccEEEEEeCCCCCCCCCCCEEEEcc---CcccccCC--cc--eec
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGH--EASGIVSKVGAKVKHLKVDNQTRFVP---EFRNVCLS--PI--LRR 71 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~Gh--E~~G~Vv~vG~~v~~~~vGdrV~~~~---~~~~~~~~--~~--~~~ 71 (408)
|++++||+.|.... .++.. ...+|.++|+ |++|+|..+|++|++|++||||.... ++...... .+ +..
T Consensus 50 v~a~~inp~~~~~~-~~~~~--~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~ 126 (348)
T PLN03154 50 NLYLSCDPYMRGRM-RDFHD--SYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQL 126 (348)
T ss_pred EEEEccCHHHHHhh-hccCC--CCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccC
Confidence 46899999987643 22111 1235889998 88999999999999999999998543 33333332 23 234
Q ss_pred cceeeec-ccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccCc---------------------
Q psy1413 72 RFSLRFR-EQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGHE--------------------- 127 (408)
Q Consensus 72 p~~~~~~-~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~~--------------------- 127 (408)
|+.++++ +.+.++.+..+++.+......+ .+++++|.|+ |++|++++|+++.+|+.
T Consensus 127 P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~ 206 (348)
T PLN03154 127 QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFD 206 (348)
T ss_pred cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCC
Confidence 7777774 3456676666665432222222 4789999986 99999999988877651
Q ss_pred ----------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-Cc-----ccCHHHHHhcCcEEEE
Q psy1413 128 ----------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DV-----KIPLVLTMTKEIDIRG 177 (408)
Q Consensus 128 ----------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~-----~~~~~~~~~~~~~l~g 177 (408)
++.+++++|... +++++++++|+++.+|.... +. .++...+++|++++.|
T Consensus 207 ~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g 286 (348)
T PLN03154 207 EAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQG 286 (348)
T ss_pred EEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEE
Confidence 233444444322 57899999999999997543 22 1356678899999999
Q ss_pred eecCC------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 178 VFRYA------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 178 ~~~~~------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
++... +.++++++++++|++++ .++++|+|+|+++||+.+.+++. .+|++++.
T Consensus 287 ~~~~~~~~~~~~~~~~~~~l~~~G~l~~--~~~~~~~L~~~~~A~~~l~~g~~-~GKvVl~~ 345 (348)
T PLN03154 287 FLQSDYLHLFPQFLENVSRYYKQGKIVY--IEDMSEGLESAPAALVGLFSGKN-VGKQVIRV 345 (348)
T ss_pred EEHHHHHHHHHHHHHHHHHHHHCCCccC--ceecccCHHHHHHHHHHHHcCCC-CceEEEEe
Confidence 87542 45788999999999974 47789999999999999999864 56777764
No 108
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.82 E-value=3.8e-19 Score=170.33 Aligned_cols=235 Identities=32% Similarity=0.568 Sum_probs=181.8
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV 154 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~ 154 (408)
+.+ ++.+.|.+.+..+.+++.+.+++..++.+...+.............|.++.|.+..+|+....++.
T Consensus 11 ~~l-~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~---------- 79 (340)
T TIGR00692 11 AEL-TEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKV---------- 79 (340)
T ss_pred cEE-EECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCC----------
Confidence 444 445667777788888888998887776553211111111223445789999999999865333333
Q ss_pred ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
+|
T Consensus 80 ------------------------------------------------------------------------------Gd 81 (340)
T TIGR00692 80 ------------------------------------------------------------------------------GD 81 (340)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 89
Q ss_pred ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCc
Q psy1413 235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGV 314 (408)
Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~ 314 (408)
+|...+...|+.|..|..+.++.|.+..+++.. ..|+|++|..++++.++++|++++.+.++...++.++++++ ....
T Consensus 82 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~a~~~~-~~~~ 159 (340)
T TIGR00692 82 YVSVETHIVCGKCYACRRGQYHVCQNTKIFGVD-TDGCFAEYAVVPAQNIWKNPKSIPPEYATIQEPLGNAVHTV-LAGP 159 (340)
T ss_pred EEEECCcCCCCCChhhhCcChhhCcCcceEeec-CCCcceeEEEeehHHcEECcCCCChHhhhhcchHHHHHHHH-HccC
Confidence 998888889999999999999999997665432 57999999999999999999999987666555777777765 2346
Q ss_pred CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413 315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394 (408)
Q Consensus 315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 394 (408)
.++++++|.|+|++|+.++|+++.+|+++|+++++++++.+.++++|++.+++.+. .++.+.+.+++.++++|++|
T Consensus 160 ~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~v~~~~----~~~~~~l~~~~~~~~~d~vl 235 (340)
T TIGR00692 160 ISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAKKMGATYVVNPFK----EDVVKEVADLTDGEGVDVFL 235 (340)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCcEEEcccc----cCHHHHHHHhcCCCCCCEEE
Confidence 78999999777999999999999999987888888888899999999999998766 56777777777778999999
Q ss_pred Ecccchhhhh
Q psy1413 395 DCSGIESTIK 404 (408)
Q Consensus 395 d~~g~~~~~~ 404 (408)
||+|+...++
T Consensus 236 d~~g~~~~~~ 245 (340)
T TIGR00692 236 EMSGAPKALE 245 (340)
T ss_pred ECCCCHHHHH
Confidence 9988755444
No 109
>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like. This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.82 E-value=1.1e-19 Score=174.47 Aligned_cols=225 Identities=20% Similarity=0.278 Sum_probs=156.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
+.++|+|++|++.+. |. ++..+|.++|||++|+|+++|++|+.+++||||+.....
T Consensus 32 v~~~~i~~~d~~~~~-g~---~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (345)
T cd08287 32 VVATCVCGSDLWPYR-GV---SPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGG 107 (345)
T ss_pred Eeeeeecccchhhhc-CC---CCCCCCcccccceEEEEEEeCCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCC
Confidence 468999999999884 33 223458899999999999999999999999999862111
Q ss_pred -------------ccccC--CcceeccceeeecccccCC------CCCCcceEEEEeeeeecCCeEEEEccCcccccccc
Q psy1413 61 -------------RNVCL--SPILRRRFSLRFREQKPIE------DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLS 119 (408)
Q Consensus 61 -------------~~~~~--~~~~~~p~~~~~~~~~~lp------~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~ 119 (408)
...+. +.+++.|+++++ +....+ ..+.+++.+.....-..+++++|.|+|.+|+++++
T Consensus 108 ~~~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~-~~~~~~~~~~l~~~~~~a~~~~~~~~~~~g~~vlI~g~g~vg~~~~~ 186 (345)
T cd08287 108 FWGAFVDGGQGEYVRVPLADGTLVKVPGSPSD-DEDLLPSLLALSDVMGTGHHAAVSAGVRPGSTVVVVGDGAVGLCAVL 186 (345)
T ss_pred cccCCCCCceEEEEEcchhhCceEECCCCCCh-hhhhhhhhHhhhcHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHH
Confidence 11111 133444444443 111111 11111111110111124788999899999999999
Q ss_pred ccccccCc-------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEE
Q psy1413 120 DPMIVGHE-------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVI 153 (408)
Q Consensus 120 ~a~~~G~~-------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~ 153 (408)
+++.+|.. ++.+++++|+. ..++++++++|+++.
T Consensus 187 lak~~G~~~v~~~~~~~~~~~~~~~~ga~~v~~~~~~~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~ 266 (345)
T cd08287 187 AAKRLGAERIIAMSRHEDRQALAREFGATDIVAERGEEAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGY 266 (345)
T ss_pred HHHHcCCCEEEEECCCHHHHHHHHHcCCceEecCCcccHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEE
Confidence 88877752 33445555432 257899999999999
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+|.+..+..++....+.+++++.+..... ..+++++++++++++++.++++++++++++.+|++.+.+++ ..|++++
T Consensus 267 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~--~~k~~~~ 344 (345)
T cd08287 267 VGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERR--AIKVLLR 344 (345)
T ss_pred ecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCC--ceEEEeC
Confidence 99776556666666788999998866554 67999999999999988778899999999999999988654 3477764
No 110
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=99.81 E-value=7.7e-19 Score=166.86 Aligned_cols=127 Identities=26% Similarity=0.274 Sum_probs=107.2
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
|+|++|..++.+.++++|++++.++++.++ ...+++.......++++++++|+|+ |++|+.++++++.+|++ ++.++
T Consensus 96 g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~-v~~~~ 174 (324)
T cd08244 96 GGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTALGLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGAT-VVGAA 174 (324)
T ss_pred ceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEe
Confidence 567889999999999999999988887666 4555643446678899999999998 99999999999999997 88888
Q ss_pred cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~ 402 (408)
+++++.+.++++|++.+++.++ .+..+.+.+.++++++|+++||+|+...
T Consensus 175 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vl~~~g~~~~ 224 (324)
T cd08244 175 GGPAKTALVRALGADVAVDYTR----PDWPDQVREALGGGGVTVVLDGVGGAIG 224 (324)
T ss_pred CCHHHHHHHHHcCCCEEEecCC----ccHHHHHHHHcCCCCceEEEECCChHhH
Confidence 8999999999999999998776 5566677777777889999999997653
No 111
>cd05284 arabinose_DH_like D-arabinose dehydrogenase. This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d
Probab=99.81 E-value=1.2e-19 Score=173.80 Aligned_cols=225 Identities=25% Similarity=0.339 Sum_probs=164.6
Q ss_pred CCeeeecccchhhhhcCCCCC-CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP--------------------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~-~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~--------------------- 58 (408)
|.++++|++|++.+. |.+.. .+..+|.++|||++|+|+++|++|..+++||||+..+
T Consensus 32 v~~~~i~~~d~~~~~-g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (340)
T cd05284 32 VGGAGVCHSDLHVID-GVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENA 110 (340)
T ss_pred EEEEeecchhHHHHc-CCCcccccCCCCeecccceeEEEEEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCC
Confidence 468999999999874 33222 3456789999999999999999999999999998654
Q ss_pred ------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEee--eeecCCeEEEEccCccccccccccccc
Q psy1413 59 ------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHC--VGICGSDVHYLTHGQIGDFRLSDPMIV 124 (408)
Q Consensus 59 ------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~--~~~~g~~vlv~g~G~vG~~~i~~a~~~ 124 (408)
++...+..+++..|+++++++.+.++..+.+++.+.... ....+++++|+|+|++|++++++++.+
T Consensus 111 ~~~~~~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~ta~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~ 190 (340)
T cd05284 111 RFPGIGTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRAL 190 (340)
T ss_pred cccCccCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHHHHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHh
Confidence 222344456667777777766666666655555322111 112478899999888999998888877
Q ss_pred c-Cc-----------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCC
Q psy1413 125 G-HE-----------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQ 159 (408)
Q Consensus 125 G-~~-----------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~ 159 (408)
| .. ++.+++++|.. .+.+++++++|+++.+|....
T Consensus 191 g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~ 270 (340)
T cd05284 191 TPATVIAVDRSEEALKLAERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGH 270 (340)
T ss_pred CCCcEEEEeCCHHHHHHHHHhCCcEEEcCCccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCC
Confidence 6 32 33445555532 257899999999999997654
Q ss_pred CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 160 DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 160 ~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
..++...++.+++++.+..... ..+.+++++++++.+++ ..+.|+++++++||+.+++++. .+|+++
T Consensus 271 -~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~---~~~~~~~~~~~~a~~~~~~~~~-~gkvv~ 338 (340)
T cd05284 271 -GRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKV---EITKFPLEDANEALDRLREGRV-TGRAVL 338 (340)
T ss_pred -CccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCc---ceEEEeHHHHHHHHHHHHcCCc-cceEEe
Confidence 4555555568999999876544 78899999999998864 4568999999999999997753 445544
No 112
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.81 E-value=1.2e-19 Score=175.54 Aligned_cols=226 Identities=26% Similarity=0.398 Sum_probs=165.6
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCC---CCCCCEEEEccC------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH---LKVDNQTRFVPE------------------ 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~---~~vGdrV~~~~~------------------ 59 (408)
|.++|||++|++.+. +. ++..+|.++|||++|+|+++|+++.. +++||+|+..+.
T Consensus 32 v~~~~l~~~d~~~~~-~~---~~~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~ 107 (367)
T cd08263 32 VAACGVCHSDLHVLK-GE---LPFPPPFVLGHEISGEVVEVGPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCE 107 (367)
T ss_pred EEEeeeCcchHHHhc-CC---CCCCCCcccccccceEEEEeCCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCc
Confidence 458999999999874 32 33467889999999999999999988 999999987321
Q ss_pred -------------------------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ec
Q psy1413 60 -------------------------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-IC 101 (408)
Q Consensus 60 -------------------------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~ 101 (408)
+...+...++..|+++++.+.+.++..+.+++.+...... ..
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~is~~~aa~l~~~~~tA~~~l~~~~~~~~ 187 (367)
T cd08263 108 DFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRP 187 (367)
T ss_pred CccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCCCCHHHHhHhcchHHHHHHHHHhcccCCC
Confidence 1122234556667777775666666655555433222222 24
Q ss_pred CCeEEEEccCccccccccccccccCc-------------------------------------------ceeEEEccCch
Q psy1413 102 GSDVHYLTHGQIGDFRLSDPMIVGHE-------------------------------------------ASGIVSKVGAK 138 (408)
Q Consensus 102 g~~vlv~g~G~vG~~~i~~a~~~G~~-------------------------------------------~~~vv~~~g~~ 138 (408)
+++++|.|+|.+|++++++++.+|+. ++.++++++..
T Consensus 188 g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~~d~vld~vg~~ 267 (367)
T cd08263 188 GETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGRGVDVVVEALGKP 267 (367)
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecCCcccHHHHHHHHhCCCCCCEEEEeCCCH
Confidence 77899999999999988888877653 33344554433
Q ss_pred ---HHHHhhccCCcEEEEEccCCC--CcccCHHHHHhcCcEEEEeecCC--CcHHHHHHHHHcCCCCCCCceeeeeccch
Q psy1413 139 ---VKHLKATRPGGCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRYA--NDYPIALAMVASGKVDVKKLITHNYLLED 211 (408)
Q Consensus 139 ---~~~~~~l~~gG~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~~--~~~~~~~~l~~~g~~~~~~~i~~~~~l~~ 211 (408)
.+++++++++|+++.+|.... ...++...++.+++++.+.+... +.+++++++++++++++.+++++.|++++
T Consensus 268 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~ 347 (367)
T cd08263 268 ETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARPRQDLPELVGLAASGKLDPEALVTHKYKLEE 347 (367)
T ss_pred HHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCCcHHHHHHHHHHHHcCCCCcccceeEEecHHH
Confidence 257899999999999996543 45566777778999998865443 57899999999999988778899999999
Q ss_pred HHHHHHHHHcCCCCceEEEE
Q psy1413 212 TLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 212 ~~~a~~~~~~~~~~~~kvvi 231 (408)
+.++|+.+++++. .+|+++
T Consensus 348 ~~~a~~~~~~~~~-~g~~~~ 366 (367)
T cd08263 348 INEAYENLRKGLI-HGRAIV 366 (367)
T ss_pred HHHHHHHHhcCCc-cceeee
Confidence 9999999988764 455554
No 113
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.81 E-value=1.1e-19 Score=174.06 Aligned_cols=228 Identities=25% Similarity=0.385 Sum_probs=160.0
Q ss_pred CCeeeecccchhhhhcCCC--------CCCCCCCCccccCCccEEEEEeCCCCCC-CCCCCEEEEccC------------
Q psy1413 1 MHCVGICGSDVHYLTHGQI--------GDFRLSDPMIVGHEASGIVSKVGAKVKH-LKVDNQTRFVPE------------ 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~--------~~~~~~~P~i~GhE~~G~Vv~vG~~v~~-~~vGdrV~~~~~------------ 59 (408)
|.++|+|++|++.+.+... ......+|.++|||++|+|+++|++++. +++||+|+..+.
T Consensus 30 v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~ 109 (341)
T cd08262 30 VLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIG 109 (341)
T ss_pred EEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCC
Confidence 4689999999998843110 0112346889999999999999999987 999999997642
Q ss_pred -----------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccCc
Q psy1413 60 -----------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGHE 127 (408)
Q Consensus 60 -----------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~~ 127 (408)
+...+.+.++..|++++++ .+.++.++.+++.. .....+ .+++++|+|+|++|.+++++++.+|+.
T Consensus 110 ~~~~~~g~~~~~~~v~~~~~~~lP~~~s~~-~a~~~~~~~~a~~~-~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~ 187 (341)
T cd08262 110 LSPEAPGGYAEYMLLSEALLLRVPDGLSME-DAALTEPLAVGLHA-VRRARLTPGEVALVIGCGPIGLAVIAALKARGVG 187 (341)
T ss_pred CCcCCCCceeeeEEechHHeEECCCCCCHH-HhhhhhhHHHHHHH-HHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 2233344556667766663 33343343333322 111222 478899999999999998888877752
Q ss_pred ----------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCC
Q psy1413 128 ----------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGS 158 (408)
Q Consensus 128 ----------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~ 158 (408)
++.+++++|.. .+++++++++|+++.+|...
T Consensus 188 ~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~ 267 (341)
T cd08262 188 PIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCM 267 (341)
T ss_pred EEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCC
Confidence 22333333331 25688999999999999765
Q ss_pred CCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 159 QDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
....+......++++++.+....+ +.+++++++++++++++.++++++|++++++++++.+.+++ ..+|+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~~~kvvv 340 (341)
T cd08262 268 ESDNIEPALAIRKELTLQFSLGYTPEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPE-HHCKILV 340 (341)
T ss_pred CCCccCHHHHhhcceEEEEEecccHHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCC-CceEEEe
Confidence 443344444467888888776665 68999999999999987778899999999999999999765 4566664
No 114
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=99.81 E-value=1.1e-18 Score=161.11 Aligned_cols=125 Identities=41% Similarity=0.574 Sum_probs=104.7
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhcc-CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEE
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRA-GVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT 347 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~-~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~ 347 (408)
.|+|++|..++++.++++|+++++++++.++ +..++++++... .++++++++|+|+|++|+.++++++.+|.+ |+++
T Consensus 86 ~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~~-v~~~ 164 (271)
T cd05188 86 DGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGAR-VIVT 164 (271)
T ss_pred CCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEE
Confidence 5789999999999999999999998888875 788888888544 448999999999955999999999999976 8889
Q ss_pred ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
++++++.+.++++|++.+++..+ .+..+.+. .+.++++|++||++|+.
T Consensus 165 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~-~~~~~~~d~vi~~~~~~ 212 (271)
T cd05188 165 DRSDEKLELAKELGADHVIDYKE----EDLEEELR-LTGGGGADVVIDAVGGP 212 (271)
T ss_pred cCCHHHHHHHHHhCCceeccCCc----CCHHHHHH-HhcCCCCCEEEECCCCH
Confidence 99999999999999999988766 33444444 55567899999999973
No 115
>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta
Probab=99.81 E-value=8.5e-20 Score=173.24 Aligned_cols=217 Identities=25% Similarity=0.307 Sum_probs=152.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR------------------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~------------------- 61 (408)
|+++++|++|++.+. |. . ++|.++|||++|+|+++|++ +++||||...+...
T Consensus 31 v~a~~i~~~d~~~~~-g~---~--~~~~~~G~e~~G~Vv~~G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (319)
T cd08242 31 VLLAGICNTDLEIYK-GY---Y--PFPGVPGHEFVGIVEEGPEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRT 101 (319)
T ss_pred EEEEEEccccHHHHc-CC---C--CCCCccCceEEEEEEEeCCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCc
Confidence 468999999999884 32 2 36889999999999999997 78999997543221
Q ss_pred ---------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413 62 ---------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG 125 (408)
Q Consensus 62 ---------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G 125 (408)
..+...++..|+.+++++.+.+ .+...++ .......+ .+++++|+|+|.+|++++++++.+|
T Consensus 102 ~~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~-~~~~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G 179 (319)
T cd08242 102 VLGIVDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAAL-EILEQVPITPGDKVAVLGDGKLGLLIAQVLALTG 179 (319)
T ss_pred ccCccCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHH-HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 1111122333333333211111 1111111 00011111 4788999999999999999988877
Q ss_pred Cc---------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcccCHHHHH
Q psy1413 126 HE---------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKIPLVLTM 169 (408)
Q Consensus 126 ~~---------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~ 169 (408)
++ ++.+++++|.. ...+++++++|+++..+.......++...+.
T Consensus 180 ~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~ 259 (319)
T cd08242 180 PDVVLVGRHSEKLALARRLGVETVLPDEAESEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAV 259 (319)
T ss_pred CeEEEEcCCHHHHHHHHHcCCcEEeCccccccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHhe
Confidence 53 34556666542 2568899999999998876666777777888
Q ss_pred hcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 170 TKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 170 ~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+++.++.+.+.. .+++++++++++++++.++++++|+++++++||+.++.+. .+|++++
T Consensus 260 ~~~~~i~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~--~~k~vi~ 318 (319)
T cd08242 260 VNEITLVGSRCG--PFAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG--ALKVLLR 318 (319)
T ss_pred ecceEEEEEecc--cHHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC--ceEEEeC
Confidence 999999887543 3899999999999987778999999999999999998664 4687765
No 116
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.81 E-value=2.2e-19 Score=172.64 Aligned_cols=227 Identities=20% Similarity=0.255 Sum_probs=161.5
Q ss_pred CCeeeecccchhhhhcCCCCC----------CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc---------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGD----------FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR--------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~----------~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~--------- 61 (408)
+.++|+|++|++.+. +.++. ....+|.++|||++|+|+++|++++.+++||+|+..+...
T Consensus 32 v~~~~i~~~d~~~~~-g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~ 110 (350)
T cd08240 32 VTACGVCHSDLHIWD-GGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLA 110 (350)
T ss_pred EEEEecCchhHHHHc-CCCCccccccccccccCCCCCcccccceeEEEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHC
Confidence 468999999999874 33221 0224578999999999999999999999999998764221
Q ss_pred ------------------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccc
Q psy1413 62 ------------------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDF 116 (408)
Q Consensus 62 ------------------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~ 116 (408)
..+...++..|+++++.+++.++..+.+++.+....... .+++++|+|+|.+|++
T Consensus 111 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~ 190 (350)
T cd08240 111 GDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLM 190 (350)
T ss_pred cCcccCCCCCceeeeccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHH
Confidence 222233445566665544444444444443221111122 4788999999999999
Q ss_pred cccccccccCc------------------------------------------ceeEEEccCch---HHHHhhccCCcEE
Q psy1413 117 RLSDPMIVGHE------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCL 151 (408)
Q Consensus 117 ~i~~a~~~G~~------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~i 151 (408)
++++++.+|++ ++.+++++|.. ..++++|+++|++
T Consensus 191 ~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~ 270 (350)
T cd08240 191 ALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKL 270 (350)
T ss_pred HHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCCccHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeE
Confidence 99988887762 23344444432 2578999999999
Q ss_pred EEEccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413 152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM 230 (408)
Q Consensus 152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv 230 (408)
+.+|.......++...+.++++++.+.+... +++.+++++++++.+++. ..+.|+++++++||+.+.+++ ..+|++
T Consensus 271 v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~-~~gkvv 347 (350)
T cd08240 271 VLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAGKLKPI--PLTERPLSDVNDALDDLKAGK-VVGRAV 347 (350)
T ss_pred EEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHHHcCCCccc--eeeEEcHHHHHHHHHHHHcCC-ccceEE
Confidence 9999876655566666777999999988766 789999999999988643 677899999999999998775 345665
Q ss_pred E
Q psy1413 231 I 231 (408)
Q Consensus 231 i 231 (408)
+
T Consensus 348 v 348 (350)
T cd08240 348 L 348 (350)
T ss_pred e
Confidence 4
No 117
>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family. This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,
Probab=99.81 E-value=1.4e-19 Score=174.06 Aligned_cols=226 Identities=23% Similarity=0.274 Sum_probs=155.8
Q ss_pred CCeeeecccchhhhhcCCCCC-------CCCCCCccccCCccEEEEEeCCCCC--CCCCCCEEEEccCcccc--------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGD-------FRLSDPMIVGHEASGIVSKVGAKVK--HLKVDNQTRFVPEFRNV-------- 63 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~-------~~~~~P~i~GhE~~G~Vv~vG~~v~--~~~vGdrV~~~~~~~~~-------- 63 (408)
+.++|||++|++.+. |.... ...++|.++|||++|+|+++|++|+ .|++||+|+..+...+.
T Consensus 31 v~a~~i~~~d~~~~~-g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~ 109 (350)
T cd08256 31 VEACGICAGDIKCYH-GAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRG 109 (350)
T ss_pred EEEEEEcccchhhhc-CCCccccccccCccCCCCcccCcceeEEEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCc
Confidence 468999999999874 32110 1124688999999999999999999 89999999874322111
Q ss_pred ---------------------------cCC-cceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccc
Q psy1413 64 ---------------------------CLS-PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIG 114 (408)
Q Consensus 64 ---------------------------~~~-~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG 114 (408)
+.+ .++..|+++++++.+.+ .++.+++.+. ....+ .+++++|.|+|.+|
T Consensus 110 ~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG 187 (350)
T cd08256 110 QYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKVPDDIPPEDAILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLG 187 (350)
T ss_pred CcccCcCccceeeccCCCCcceeeEEcccccceEECCCCCCHHHHhhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHH
Confidence 111 22334444443222222 2222222111 11112 47788888899999
Q ss_pred cccccccccccC-------------------------------------------cceeEEEccCch---HHHHhhccCC
Q psy1413 115 DFRLSDPMIVGH-------------------------------------------EASGIVSKVGAK---VKHLKATRPG 148 (408)
Q Consensus 115 ~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~---~~~~~~l~~g 148 (408)
++++++++.+|+ .++.+++++|.. ...+++++++
T Consensus 188 ~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~ 267 (350)
T cd08256 188 LGMIGAARLKNPKKLIVLDLKDERLALARKFGADVVLNPPEVDVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKL 267 (350)
T ss_pred HHHHHHHHHcCCcEEEEEcCCHHHHHHHHHcCCcEEecCCCcCHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcC
Confidence 999888887774 145556666532 2578999999
Q ss_pred cEEEEEccCCCCcccCHHHH-HhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCce
Q psy1413 149 GCLVIVGAGSQDVKIPLVLT-MTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAI 227 (408)
Q Consensus 149 G~iv~~G~~~~~~~~~~~~~-~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~ 227 (408)
|+++.+|.......++...+ ..+++++.++......+.+++++++++.+++.++++++|+++++.+||+.+.++.. ..
T Consensus 268 G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~ 346 (350)
T cd08256 268 GRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDD-SI 346 (350)
T ss_pred CEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCC-ce
Confidence 99999997665555555544 46788898887766789999999999999887778999999999999999997653 44
Q ss_pred EEE
Q psy1413 228 KVM 230 (408)
Q Consensus 228 kvv 230 (408)
|++
T Consensus 347 kvv 349 (350)
T cd08256 347 KVV 349 (350)
T ss_pred EEe
Confidence 544
No 118
>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu
Probab=99.81 E-value=8.1e-19 Score=169.86 Aligned_cols=231 Identities=33% Similarity=0.554 Sum_probs=181.6
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHH---HhhccCCcEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH---LKATRPGGCL 151 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~---~~~l~~gG~i 151 (408)
+.+ +..++|.+.+..+.+.+..++++..++.+. .|... .......|.++.|++..+|+..+. ++.
T Consensus 13 ~~~-~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~-~~~~~---~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~------- 80 (367)
T cd08263 13 LTI-EEIPVPRPKEGEILIRVAACGVCHSDLHVL-KGELP---FPPPFVLGHEISGEVVEVGPNVENPYGLSV------- 80 (367)
T ss_pred cEE-EEeeCCCCCCCeEEEEEEEeeeCcchHHHh-cCCCC---CCCCcccccccceEEEEeCCCCCCCCcCCC-------
Confidence 455 445667667778888888999887766553 22211 123446789999999999864222 222
Q ss_pred EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
T Consensus 81 -------------------------------------------------------------------------------- 80 (367)
T cd08263 81 -------------------------------------------------------------------------------- 80 (367)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCceeecCCCcccccccccCCccccccceeec---------------cc------CCCCccceeEEeeccceeeeCCCC
Q psy1413 232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFC---------------AT------PPDHGNLSRYYRHAADFCHKLPDH 290 (408)
Q Consensus 232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~------~~~~g~~~~~~~~~~~~~~~~p~~ 290 (408)
+++|...+..+|+.|.+|..+.+++|.+...+ .. ...+|+|++|+.++++.++++|++
T Consensus 81 -Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~ 159 (367)
T cd08263 81 -GDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPES 159 (367)
T ss_pred -CCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCC
Confidence 88888877889999999999999999986521 00 023689999999999999999999
Q ss_pred CCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEec
Q psy1413 291 VSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLI 368 (408)
Q Consensus 291 ~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~ 368 (408)
+++.+++.++ ...++++++ ....++++++++|+|+|++|++++++|+.+|+++++.+++++++.+.++++|++.+++.
T Consensus 160 is~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~~~~g~~~v~~~ 239 (367)
T cd08263 160 LDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNA 239 (367)
T ss_pred CCHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCceEecC
Confidence 9998888777 677788887 34566899999999669999999999999999878888888999999999999999998
Q ss_pred CCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413 369 DRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 369 ~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~ 402 (408)
+. .+..+.+++.+.++++|++||++|+...
T Consensus 240 ~~----~~~~~~l~~~~~~~~~d~vld~vg~~~~ 269 (367)
T cd08263 240 AK----EDAVAAIREITGGRGVDVVVEALGKPET 269 (367)
T ss_pred Cc----ccHHHHHHHHhCCCCCCEEEEeCCCHHH
Confidence 76 5566777777777889999999998633
No 119
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.81 E-value=1e-18 Score=167.58 Aligned_cols=232 Identities=41% Similarity=0.714 Sum_probs=184.2
Q ss_pred ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413 73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV 152 (408)
Q Consensus 73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv 152 (408)
+.+.+ +..++|...+..+++.+.+.+++..++.+.- |. .........|.++.|.+..+|+....++.
T Consensus 10 ~~l~~-~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~-~~---~~~~~~~~~g~~~~G~V~~~g~~v~~~~~-------- 76 (343)
T cd08236 10 GDLRY-EDIPKPEPGPGEVLVKVKACGICGSDIPRYL-GT---GAYHPPLVLGHEFSGTVEEVGSGVDDLAV-------- 76 (343)
T ss_pred CceeE-EecCCCCCCCCeEEEEEEEEEECccchHhhc-CC---CCCCCCcccCcceEEEEEEECCCCCcCCC--------
Confidence 34555 5556676677788888888888877665531 11 11123456788999999998864333333
Q ss_pred EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
T Consensus 77 -------------------------------------------------------------------------------- 76 (343)
T cd08236 77 -------------------------------------------------------------------------------- 76 (343)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhcc
Q psy1413 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRA 312 (408)
Q Consensus 233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~ 312 (408)
+|+|...+...|+.|.+|..+++..|++....+. ...|+|++|+.++++.++++|++++.++++.+....++++++...
T Consensus 77 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~~~~~ta~~~l~~~ 155 (343)
T cd08236 77 GDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGS-RRDGAFAEYVSVPARNLIKIPDHVDYEEAAMIEPAAVALHAVRLA 155 (343)
T ss_pred CCEEEEcCCCCCCCChhHHCcChhhCCCcceEec-ccCCcccceEEechHHeEECcCCCCHHHHHhcchHHHHHHHHHhc
Confidence 8899887778899999999999999998766654 367999999999999999999999998888777777888888777
Q ss_pred CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413 313 GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK 392 (408)
Q Consensus 313 ~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~ 392 (408)
.++++++++|+|+|.+|++++|+++.+|++.++++++++++.+.++++|++.++++++ .. .+.++..++++++|+
T Consensus 156 ~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~~~g~~~~~~~~~----~~-~~~~~~~~~~~~~d~ 230 (343)
T cd08236 156 GITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVARELGADDTINPKE----ED-VEKVRELTEGRGADL 230 (343)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEecCcc----cc-HHHHHHHhCCCCCCE
Confidence 7899999999977999999999999999987888888888888889999999998876 34 556667777778999
Q ss_pred EEEcccchhhh
Q psy1413 393 TIDCSGIESTI 403 (408)
Q Consensus 393 i~d~~g~~~~~ 403 (408)
+|||+|.....
T Consensus 231 vld~~g~~~~~ 241 (343)
T cd08236 231 VIEAAGSPATI 241 (343)
T ss_pred EEECCCCHHHH
Confidence 99999865443
No 120
>TIGR00692 tdh L-threonine 3-dehydrogenase. E. coli His-90 modulates substrate specificity and is believed part of the active site.
Probab=99.81 E-value=2.3e-19 Score=171.81 Aligned_cols=229 Identities=25% Similarity=0.380 Sum_probs=158.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
|.++++|++|+.++..........++|.++|||++|+|+++|++|+++++||+|...+.+
T Consensus 30 v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (340)
T TIGR00692 30 VLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSVETHIVCGKCYACRRGQYHVCQNTK 109 (340)
T ss_pred EEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEECCcCCCCCChhhhCcChhhCcCcc
Confidence 468899999998864322112233568889999999999999999999999999874321
Q ss_pred -------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCc
Q psy1413 61 -------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE 127 (408)
Q Consensus 61 -------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~ 127 (408)
.......++..|+++++ +.+.++.++.+++.... .....+++++|.++|++|.+++++++.+|..
T Consensus 110 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~-~~a~~~~~~~~a~~~~~-~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~ 187 (340)
T TIGR00692 110 IFGVDTDGCFAEYAVVPAQNIWKNPKSIPP-EYATIQEPLGNAVHTVL-AGPISGKSVLVTGAGPIGLMAIAVAKASGAY 187 (340)
T ss_pred eEeecCCCcceeEEEeehHHcEECcCCCCh-HhhhhcchHHHHHHHHH-ccCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 12223344445555554 33334333333221111 1112578899988889999998888877753
Q ss_pred -------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCc
Q psy1413 128 -------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDV 161 (408)
Q Consensus 128 -------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~ 161 (408)
++.+++++|.. .+.+++++++|+++.+|......
T Consensus 188 ~v~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~ 267 (340)
T TIGR00692 188 PVIVSDPNEYRLELAKKMGATYVVNPFKEDVVKEVADLTDGEGVDVFLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKV 267 (340)
T ss_pred EEEEECCCHHHHHHHHHhCCcEEEcccccCHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCc
Confidence 22333333322 15688999999999999765545
Q ss_pred ccCHH-HHHhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 162 KIPLV-LTMTKEIDIRGVFRY--ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 162 ~~~~~-~~~~~~~~l~g~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
.+++. .++++++++.+.... .+.+.+++++++++++++.+++++.++++++.++++.+.+++ . +|+++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~-gkvvv~~ 340 (340)
T TIGR00692 268 TIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIITHKFKFDKFEKGFELMRSGQ-T-GKVILSL 340 (340)
T ss_pred ccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHheeeeeeHHHHHHHHHHHhcCC-C-ceEEEeC
Confidence 55555 678889998876532 256788999999999987777999999999999999998764 3 7887753
No 121
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=99.80 E-value=8.7e-19 Score=167.51 Aligned_cols=127 Identities=19% Similarity=0.243 Sum_probs=104.2
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCC-----CCEEEEEec-chhHHHHHHHHHHh-C
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTL-----GSKVLITGA-GPIGLVTLLTARAL-G 340 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~-----~~~~lv~G~-G~~G~~~~~~~~~~-G 340 (408)
.|+|++|..++++.++++|++++.++++..+ ...++++++ ....+++ ++++||+|+ |++|++++|+++.+ |
T Consensus 95 ~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G 174 (336)
T TIGR02817 95 PGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTG 174 (336)
T ss_pred CCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCC
Confidence 4778899999999999999999998888777 566678776 4566666 899999998 99999999999998 9
Q ss_pred CCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhh
Q psy1413 341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTI 403 (408)
Q Consensus 341 a~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~ 403 (408)
++ |+.+++++++.+.++++|+++++++.. +..+.+++. .++++|+++|++++...+
T Consensus 175 ~~-vi~~~~~~~~~~~l~~~g~~~~~~~~~-----~~~~~i~~~-~~~~vd~vl~~~~~~~~~ 230 (336)
T TIGR02817 175 LT-VIATASRPESQEWVLELGAHHVIDHSK-----PLKAQLEKL-GLEAVSYVFSLTHTDQHF 230 (336)
T ss_pred CE-EEEEcCcHHHHHHHHHcCCCEEEECCC-----CHHHHHHHh-cCCCCCEEEEcCCcHHHH
Confidence 87 888888889999999999999998643 355556664 456899999998654443
No 122
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=99.80 E-value=6.6e-19 Score=168.72 Aligned_cols=129 Identities=20% Similarity=0.215 Sum_probs=102.9
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~ 347 (408)
|+|++|..++++.++++|+++++++++.++ ...++++++. ...+++++++||+|+ |++|+.++|+|+.+|++ ++++
T Consensus 99 g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~-v~~~ 177 (341)
T cd08290 99 GTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIK-TINV 177 (341)
T ss_pred ccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCe-EEEE
Confidence 346677888888899999999988888766 6677888873 467899999999998 99999999999999998 6666
Q ss_pred ecCh----hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413 348 DILE----HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 348 ~~~~----~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~ 402 (408)
.+++ ++.+.++++|++++++++.. +..+..+.++..+.+ ++|.+|||+|+...
T Consensus 178 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~i~~~~~~-~~d~vld~~g~~~~ 234 (341)
T cd08290 178 VRDRPDLEELKERLKALGADHVLTEEEL-RSLLATELLKSAPGG-RPKLALNCVGGKSA 234 (341)
T ss_pred EcCCCcchhHHHHHHhcCCCEEEeCccc-ccccHHHHHHHHcCC-CceEEEECcCcHhH
Confidence 5554 56788888999999987651 001566777777766 89999999997654
No 123
>cd05278 FDH_like Formaldehyde dehydrogenases. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall
Probab=99.80 E-value=4.8e-19 Score=170.08 Aligned_cols=228 Identities=27% Similarity=0.395 Sum_probs=163.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
|.++|+|++|++.+. +.+.. .++|.++|||++|+|+++|++++++++||+|...+.
T Consensus 32 v~~~~i~~~d~~~~~-g~~~~--~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (347)
T cd05278 32 VTATSICGSDLHIYR-GGVPG--AKHGMILGHEFVGEVVEVGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGL 108 (347)
T ss_pred EEEEEechhhHHHHc-CCCCC--CCCCceeccceEEEEEEECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCC
Confidence 468999999999884 33222 466899999999999999999999999999986321
Q ss_pred ---------------cccccCC--cceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccc
Q psy1413 60 ---------------FRNVCLS--PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDP 121 (408)
Q Consensus 60 ---------------~~~~~~~--~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a 121 (408)
+...+.. .++..|+++++.+.+.++..+.+++... ....+ .+++++|.|+|.+|+++++++
T Consensus 109 ~~~~~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqla 187 (347)
T cd05278 109 WGWKLGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTGFHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGA 187 (347)
T ss_pred cccccccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhheeehh-hhcCCCCCCEEEEECCCHHHHHHHHHH
Confidence 1222332 5667777777755666666666666443 22222 478888888888999998888
Q ss_pred ccccC-c------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEc
Q psy1413 122 MIVGH-E------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVG 155 (408)
Q Consensus 122 ~~~G~-~------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G 155 (408)
+.+|. . ++.++++++.. .+.+++|+++|+++.+|
T Consensus 188 k~~g~~~v~~~~~~~~~~~~~~~~g~~~vi~~~~~~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g 267 (347)
T cd05278 188 RLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVG 267 (347)
T ss_pred HHcCCCEEEEEeCCHHHHHHHHHhCCcEEEcCCcchHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEc
Confidence 87774 1 23344444431 25689999999999999
Q ss_pred cCCCCcccCH-HHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 156 AGSQDVKIPL-VLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 156 ~~~~~~~~~~-~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
.......... ...+.+++++.+..... ..+++++++++++++++.+++...|+++++.++++.+..++....|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 268 VYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred CCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 6544322212 23346788887765443 67899999999999987667889999999999999998776545577654
No 124
>cd08246 crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma
Probab=99.80 E-value=1.8e-19 Score=175.97 Aligned_cols=228 Identities=17% Similarity=0.174 Sum_probs=157.6
Q ss_pred CCeeeecccchhhhhcCCCCCC------C-CCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc-------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDF------R-LSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~------~-~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~------------- 60 (408)
|.++|||++|++.+.+.....+ + ..++.++|||++|+|+++|++++.+++||+|++.+..
T Consensus 49 v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~ 128 (393)
T cd08246 49 VMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDP 128 (393)
T ss_pred EEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCEEEEeccccccCccccccccc
Confidence 4689999999998743211000 0 1234689999999999999999999999999876521
Q ss_pred ---------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEee--ee-ecCCeEEEEcc-Ccccc
Q psy1413 61 ---------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHC--VG-ICGSDVHYLTH-GQIGD 115 (408)
Q Consensus 61 ---------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~--~~-~~g~~vlv~g~-G~vG~ 115 (408)
...+...++..|+++++.+.+.++.++.+++.+.... .. ..+++++|+|+ |++|+
T Consensus 129 ~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~ 208 (393)
T cd08246 129 MFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGS 208 (393)
T ss_pred ccccccccccccCCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHH
Confidence 1222234444555555544444444444444221111 12 24789999985 99999
Q ss_pred ccccccccccCc-----------------------------------------------------------------cee
Q psy1413 116 FRLSDPMIVGHE-----------------------------------------------------------------ASG 130 (408)
Q Consensus 116 ~~i~~a~~~G~~-----------------------------------------------------------------~~~ 130 (408)
+++++++.+|++ ++.
T Consensus 209 a~~~lak~~G~~vv~~~~s~~~~~~~~~~G~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~ 288 (393)
T cd08246 209 MAIQLARAAGANPVAVVSSEEKAEYCRALGAEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDI 288 (393)
T ss_pred HHHHHHHHcCCeEEEEeCCHHHHHHHHHcCCCEEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeE
Confidence 988888776653 223
Q ss_pred EEEccCch--HHHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeee
Q psy1413 131 IVSKVGAK--VKHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHN 206 (408)
Q Consensus 131 vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~ 206 (408)
+++++|.. .+++++++++|+++.+|.... ...++...+++++.++.+.+..+ +++++++++++++++++ +++++
T Consensus 289 vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~--~~~~~ 366 (393)
T cd08246 289 VFEHPGRATFPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGSHFANDREAAEANRLVMKGRIDP--CLSKV 366 (393)
T ss_pred EEECCchHhHHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEecccCcHHHHHHHHHHHHcCCcee--eeeEE
Confidence 34444432 257899999999999996543 45567777889999999988776 78999999999998864 48899
Q ss_pred eccchHHHHHHHHHcCCCCceEEE
Q psy1413 207 YLLEDTLHAFETAKTGAGNAIKVM 230 (408)
Q Consensus 207 ~~l~~~~~a~~~~~~~~~~~~kvv 230 (408)
|+++|+++||+.+.++....+|++
T Consensus 367 ~~l~~~~~a~~~~~~~~~~~gkvv 390 (393)
T cd08246 367 FSLDETPDAHQLMHRNQHHVGNMA 390 (393)
T ss_pred EeHHHHHHHHHHHHhCccccceEE
Confidence 999999999999987622334444
No 125
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.80 E-value=3.4e-19 Score=170.53 Aligned_cols=224 Identities=24% Similarity=0.293 Sum_probs=158.9
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
|+++++|++|++.+. +. .+...|.++|||++|+|+++|++++.|++||+|++.+..
T Consensus 32 v~~~~i~~~d~~~~~-g~---~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (338)
T PRK09422 32 MEYCGVCHTDLHVAN-GD---FGDKTGRILGHEGIGIVKEVGPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSV 107 (338)
T ss_pred EEEEeechhHHHHHc-CC---CCCCCCccCCcccceEEEEECCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCc
Confidence 468999999999874 32 222347899999999999999999999999999863211
Q ss_pred --------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccc-
Q psy1413 61 --------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIV- 124 (408)
Q Consensus 61 --------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~- 124 (408)
...+...++..|+++++.+.+.++....+++... .... ..+++++|.|+|++|++++++++..
T Consensus 108 ~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~ 186 (338)
T PRK09422 108 KNAGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAI-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVF 186 (338)
T ss_pred cccCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHH-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhC
Confidence 1112234455666666655555555545544221 1112 2478899999999999999999874
Q ss_pred cCccee-----------------------------------------EEEccCch---HHHHhhccCCcEEEEEccCCCC
Q psy1413 125 GHEASG-----------------------------------------IVSKVGAK---VKHLKATRPGGCLVIVGAGSQD 160 (408)
Q Consensus 125 G~~~~~-----------------------------------------vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~ 160 (408)
|+.... ++.+.++. .+++++++++|+++.+|.....
T Consensus 187 g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~v~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~ 266 (338)
T PRK09422 187 NAKVIAVDINDDKLALAKEVGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPES 266 (338)
T ss_pred CCeEEEEeCChHHHHHHHHcCCcEEecccccccHHHHHHHhcCCCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCC
Confidence 753211 11111111 1568889999999999987666
Q ss_pred cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 161 VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 161 ~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
..++...+..++.++.+.+... ++++++++++++++++. .++ .++++++++||+.+.++. ..+|+++++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~--~v~-~~~~~~~~~a~~~~~~~~-~~gkvvv~~ 336 (338)
T PRK09422 267 MDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVP--KVQ-LRPLEDINDIFDEMEQGK-IQGRMVIDF 336 (338)
T ss_pred ceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCc--cEE-EEcHHHHHHHHHHHHcCC-ccceEEEec
Confidence 6677778888999998877554 77899999999998854 354 589999999999998875 456776654
No 126
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.80 E-value=1.1e-18 Score=167.16 Aligned_cols=233 Identities=32% Similarity=0.540 Sum_probs=177.0
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV 154 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~ 154 (408)
+.+ ...+.|.+.+..+.+++...+++..++.+.............+...|.++.|++..+|.....++.
T Consensus 13 ~~~-~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~---------- 81 (341)
T cd05281 13 AEL-VEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKV---------- 81 (341)
T ss_pred eEE-EeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCC----------
Confidence 444 445667777788888888888877665542110000011223445788999999998864322222
Q ss_pred ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
++
T Consensus 82 ------------------------------------------------------------------------------Gd 83 (341)
T cd05281 82 ------------------------------------------------------------------------------GD 83 (341)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 78
Q ss_pred ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCc
Q psy1413 235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGV 314 (408)
Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~ 314 (408)
+|...+..+|+.|..|..+++++|....+.+. ..+|+|++|+.++++.++++|++++.+.++++.++.++++++. ...
T Consensus 84 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~v~v~~~~~~~lP~~~~~~~a~~~~~~~~a~~~~~-~~~ 161 (341)
T cd05281 84 YVSAETHIVCGKCYQCRTGNYHVCQNTKILGV-DTDGCFAEYVVVPEENLWKNDKDIPPEIASIQEPLGNAVHTVL-AGD 161 (341)
T ss_pred EEEECCccCCCCChHHHCcCcccCcccceEec-cCCCcceEEEEechHHcEECcCCCCHHHhhhhhHHHHHHHHHH-hcC
Confidence 88777777999999999999999977544443 2468999999999999999999999866666667778877664 345
Q ss_pred CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413 315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394 (408)
Q Consensus 315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 394 (408)
+++++++|+|+|++|+.++|+++.+|++++++++++++|.+.++++|++++++.+. .+.. .++++++++++|++|
T Consensus 162 ~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~-~~~~~~~~~~vd~vl 236 (341)
T cd05281 162 VSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELAKKMGADVVINPRE----EDVV-EVKSVTDGTGVDVVL 236 (341)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCcceeeCccc----ccHH-HHHHHcCCCCCCEEE
Confidence 78999999877999999999999999976888888889999999999999988765 4556 677777778999999
Q ss_pred Ecccchhhh
Q psy1413 395 DCSGIESTI 403 (408)
Q Consensus 395 d~~g~~~~~ 403 (408)
||+|+....
T Consensus 237 d~~g~~~~~ 245 (341)
T cd05281 237 EMSGNPKAI 245 (341)
T ss_pred ECCCCHHHH
Confidence 999875443
No 127
>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.80 E-value=2.2e-18 Score=165.09 Aligned_cols=228 Identities=31% Similarity=0.521 Sum_probs=171.5
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEE-ccCc-c----cc--ccccccccccCcceeEEEccCchHHH-Hhh
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYL-THGQ-I----GD--FRLSDPMIVGHEASGIVSKVGAKVKH-LKA 144 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~-g~G~-v----G~--~~i~~a~~~G~~~~~vv~~~g~~~~~-~~~ 144 (408)
.+.+ +..+.|.+.+..+++.+.+.+++..++.+. |... + +. .........|.++.|++..+|...+. ++.
T Consensus 10 ~~~~-~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~ 88 (341)
T cd08262 10 PLVV-RDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKV 88 (341)
T ss_pred ceEE-EecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCCCCcCCCCC
Confidence 4555 556778888888899999999987776553 2100 0 00 01112345788999999999864332 333
Q ss_pred ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
T Consensus 89 -------------------------------------------------------------------------------- 88 (341)
T cd08262 89 -------------------------------------------------------------------------------- 88 (341)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhh
Q psy1413 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSV 304 (408)
Q Consensus 225 ~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ 304 (408)
+|+|+..+...|+.|..|..|. .+...|+|++|+.++++.++++|++++.+++++..++.+
T Consensus 89 --------Gd~V~~~~~~~~~~~~~~~~~~-----------~~~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~~~~~~~~ 149 (341)
T cd08262 89 --------GTRVTSLPLLLCGQGASCGIGL-----------SPEAPGGYAEYMLLSEALLLRVPDGLSMEDAALTEPLAV 149 (341)
T ss_pred --------CCEEEecCCcCCCCChhhhCCC-----------CcCCCCceeeeEEechHHeEECCCCCCHHHhhhhhhHHH
Confidence 8999988888999999995322 123569999999999999999999999888775557778
Q ss_pred hhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413 305 GVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL 384 (408)
Q Consensus 305 ~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~ 384 (408)
+++++....++++++++|+|+|++|++++|+++.+|++.++++++++++.+.++++|++.+++++.....++.. .+.+.
T Consensus 150 a~~~~~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~-~~~~~ 228 (341)
T cd08262 150 GLHAVRRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWA-AELAR 228 (341)
T ss_pred HHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHcCCcEEEcCCCcCHHHHHH-HHHHH
Confidence 88887778899999999997799999999999999999788888889999999999999999876521112333 34455
Q ss_pred hcCCCCceEEEcccchhh
Q psy1413 385 LQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 385 ~~~~~~d~i~d~~g~~~~ 402 (408)
+.++++|++||++|+...
T Consensus 229 ~~~~~~d~vid~~g~~~~ 246 (341)
T cd08262 229 AGGPKPAVIFECVGAPGL 246 (341)
T ss_pred hCCCCCCEEEECCCCHHH
Confidence 566789999999987433
No 128
>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase. 6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy
Probab=99.80 E-value=1.1e-18 Score=167.81 Aligned_cols=166 Identities=27% Similarity=0.365 Sum_probs=140.1
Q ss_pred cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR 311 (408)
Q Consensus 233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~ 311 (408)
+++|+..|...|+.|..|.+++++.|....+.+.. ..|+|++|+.++++.++++|+++++.+++.+. ...++++++..
T Consensus 91 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~p~~~s~~~aa~l~~~~~tA~~~~~~ 169 (350)
T cd08240 91 GDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIF-QDGGYAEYVIVPHSRYLVDPGGLDPALAATLACSGLTAYSAVKK 169 (350)
T ss_pred CCEEEECCcCCCCCChHHHCcCcccCCCCCceeee-ccCcceeeEEecHHHeeeCCCCCCHHHeehhhchhhhHHHHHHh
Confidence 89999888899999999999999999887666543 57999999999999999999999998888766 66778888744
Q ss_pred c-CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413 312 A-GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP 390 (408)
Q Consensus 312 ~-~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
. .++++++++|+|+|++|++++|+++.+|+++|+++++++++.+.++++|++.+++.++ .+..+.+.+...+ ++
T Consensus 170 ~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~-~~ 244 (350)
T cd08240 170 LMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAAKAAGADVVVNGSD----PDAAKRIIKAAGG-GV 244 (350)
T ss_pred cccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHhCCcEEecCCC----ccHHHHHHHHhCC-CC
Confidence 3 4458899999977999999999999999988999989999999999999998888765 4455666666655 89
Q ss_pred ceEEEcccchhhhh
Q psy1413 391 DKTIDCSGIESTIK 404 (408)
Q Consensus 391 d~i~d~~g~~~~~~ 404 (408)
|++||++|.....+
T Consensus 245 d~vid~~g~~~~~~ 258 (350)
T cd08240 245 DAVIDFVNNSATAS 258 (350)
T ss_pred cEEEECCCCHHHHH
Confidence 99999998654443
No 129
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.80 E-value=1.8e-18 Score=165.64 Aligned_cols=235 Identities=29% Similarity=0.472 Sum_probs=184.2
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.+ +..++|.+.+..+++.+...+++..++.+. .|..+. ........|.++.|.+..+|+....++.
T Consensus 13 ~~~~-~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~-~g~~~~-~~~~~~~~g~e~~G~V~~vG~~~~~~~~--------- 80 (341)
T cd08297 13 PYEV-KDVPVPEPGPGEVLVKLEASGVCHTDLHAA-LGDWPV-KPKLPLIGGHEGAGVVVAVGPGVSGLKV--------- 80 (341)
T ss_pred CceE-EEeeCCCCCCCeEEEEEEEeecchhHHHHH-cCCCCc-CCCCCccCCcccceEEEEeCCCCCCCCC---------
Confidence 5555 455667777788888888888877665443 122111 0123345688999999998865332333
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 81 -------------------------------------------------------------------------------G 81 (341)
T cd08297 81 -------------------------------------------------------------------------------G 81 (341)
T ss_pred -------------------------------------------------------------------------------C
Confidence 7
Q ss_pred CceeecC-CCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413 234 DRVAIEP-GVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR 311 (408)
Q Consensus 234 ~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~ 311 (408)
++|...| ..+|+.|++|..++++.|......+. ...|+|++|+.++++.++++|+++++.+++.++ ...++++++..
T Consensus 82 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~ 160 (341)
T cd08297 82 DRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGY-TVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK 160 (341)
T ss_pred CEEEEecCCCCCCCCccccCCCcccCCCcccccc-ccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh
Confidence 8887665 36799999999999999988876665 246899999999999999999999988877665 66778888866
Q ss_pred cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413 312 AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP 390 (408)
Q Consensus 312 ~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
..+++++++||+|+ +++|++++++++++|++ ++.+++++++.+.++++|++.++++++ .+..+.+.+.++++++
T Consensus 161 ~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~----~~~~~~~~~~~~~~~v 235 (341)
T cd08297 161 AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLR-VIAIDVGDEKLELAKELGADAFVDFKK----SDDVEAVKELTGGGGA 235 (341)
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHcCCcEEEcCCC----ccHHHHHHHHhcCCCC
Confidence 68899999999998 78999999999999996 888889999999999999999999876 5677778888878899
Q ss_pred ceEEEcccchhhhhh
Q psy1413 391 DKTIDCSGIESTIKL 405 (408)
Q Consensus 391 d~i~d~~g~~~~~~~ 405 (408)
|++||+.++....+.
T Consensus 236 d~vl~~~~~~~~~~~ 250 (341)
T cd08297 236 HAVVVTAVSAAAYEQ 250 (341)
T ss_pred CEEEEcCCchHHHHH
Confidence 999998876555443
No 130
>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi
Probab=99.79 E-value=4.6e-19 Score=172.51 Aligned_cols=227 Identities=25% Similarity=0.313 Sum_probs=153.7
Q ss_pred CCeeeecccchhhhhcCCCC----CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccc--------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIG----DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRN-------------- 62 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~----~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~-------------- 62 (408)
|+++|+|++|++.+..+..+ +...++|.++|||++|+|+++|++++.|++||||++.+...|
T Consensus 58 v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~ 137 (384)
T cd08265 58 VKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTAEEMMWCGMCRACRSGSPNHC 137 (384)
T ss_pred EEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccC
Confidence 46899999999987522101 112356889999999999999999999999999986442211
Q ss_pred -------------------ccCCcceecccee-------eecccccCCCCCCcceEEEEee-eee-cCCeEEEEccCccc
Q psy1413 63 -------------------VCLSPILRRRFSL-------RFREQKPIEDPDDHEVLLEMHC-VGI-CGSDVHYLTHGQIG 114 (408)
Q Consensus 63 -------------------~~~~~~~~~p~~~-------~~~~~~~lp~~~~~~~~~~~~~-~~~-~g~~vlv~g~G~vG 114 (408)
.....++..|+++ .+ +.+.++.++.+++.+.... ..+ .+++++|.|+|++|
T Consensus 138 ~~~~~~g~~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~-~~a~~~~~~~ta~~al~~~~~~~~~g~~VlV~g~g~vG 216 (384)
T cd08265 138 KNLKELGFSADGAFAEYIAVNARYAWEINELREIYSEDKAF-EAGALVEPTSVAYNGLFIRGGGFRPGAYVVVYGAGPIG 216 (384)
T ss_pred CCcceeeecCCCcceeeEEechHHeEECCccccccccCCCH-HHhhhhhHHHHHHHHHHhhcCCCCCCCEEEEECCCHHH
Confidence 1122223333321 11 1222222222222111001 122 47889999999999
Q ss_pred cccccccccccCc----------------------------------------------ceeEEEccCch----HHHHhh
Q psy1413 115 DFRLSDPMIVGHE----------------------------------------------ASGIVSKVGAK----VKHLKA 144 (408)
Q Consensus 115 ~~~i~~a~~~G~~----------------------------------------------~~~vv~~~g~~----~~~~~~ 144 (408)
++++++++.+|+. ++.++++.|.. .+.+++
T Consensus 217 ~~ai~lA~~~G~~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~v~~~~~g~gvDvvld~~g~~~~~~~~~~~~ 296 (384)
T cd08265 217 LAAIALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEVTKGWGADIQVEAAGAPPATIPQMEKS 296 (384)
T ss_pred HHHHHHHHHcCCCEEEEEcCCHHHHHHHHHcCCCEEEcccccccccHHHHHHHhcCCCCCCEEEECCCCcHHHHHHHHHH
Confidence 9998888877751 22334444421 256789
Q ss_pred ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcC
Q psy1413 145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY--ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTG 222 (408)
Q Consensus 145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~ 222 (408)
|+++|+++.+|......+++...+.++..++.+.+.. ...+++++++++++++++.+++++.|+++++.+||+.+.++
T Consensus 297 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~ 376 (384)
T cd08265 297 IAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER 376 (384)
T ss_pred HHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC
Confidence 9999999999976555556666778888899988753 35799999999999998877899999999999999997654
Q ss_pred CCCceEEE
Q psy1413 223 AGNAIKVM 230 (408)
Q Consensus 223 ~~~~~kvv 230 (408)
..+|++
T Consensus 377 --~~~kvv 382 (384)
T cd08265 377 --TDGKIT 382 (384)
T ss_pred --CCceEE
Confidence 345554
No 131
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.79 E-value=2.8e-18 Score=164.64 Aligned_cols=232 Identities=31% Similarity=0.530 Sum_probs=178.3
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV 154 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~ 154 (408)
+.+ ...+.|.+.+..+.+++.+.+++..++.+. .|.... .......|.++.|++..+|+....++.
T Consensus 13 ~~~-~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~-~g~~~~--~~~~~~~g~e~~G~V~~~G~~~~~~~~---------- 78 (345)
T cd08260 13 LEI-REVPDPEPPPDGVVVEVEACGVCRSDWHGW-QGHDPD--VTLPHVPGHEFAGVVVEVGEDVSRWRV---------- 78 (345)
T ss_pred cEE-EEccCCCCCCCeEEEEEEEeeccHHHHHHh-cCCCCC--CCCCeeeccceeEEEEEECCCCccCCC----------
Confidence 444 334556666777888888888877665443 121111 223456788999999988864332333
Q ss_pred ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
++
T Consensus 79 ------------------------------------------------------------------------------Gd 80 (345)
T cd08260 79 ------------------------------------------------------------------------------GD 80 (345)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 78
Q ss_pred ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccc--eeeeCCCCCCcccccccc-hhhhhhhhh-h
Q psy1413 235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAAD--FCHKLPDHVSLEEGALLE-PLSVGVHAC-R 310 (408)
Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~ 310 (408)
+|+..+..+|++|..|..|..++|.++.+.+.. .+|+|++|+.+++. .++++|++++.++++.++ ...++++++ .
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~ 159 (345)
T cd08260 81 RVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFT-HPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVH 159 (345)
T ss_pred EEEECCCCCCCCCccccCcCcccCCCCcccccC-CCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHH
Confidence 887756668999999999999999997655543 37999999999974 899999999988888776 677888887 5
Q ss_pred ccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413 311 RAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP 390 (408)
Q Consensus 311 ~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
...++++++++|+|+|++|++++|+++.+|++ |+++.+++++.+.++++|++.+++.+. ..+..+.+..++.+ ++
T Consensus 160 ~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~i~~~~---~~~~~~~~~~~~~~-~~ 234 (345)
T cd08260 160 QARVKPGEWVAVHGCGGVGLSAVMIASALGAR-VIAVDIDDDKLELARELGAVATVNASE---VEDVAAAVRDLTGG-GA 234 (345)
T ss_pred ccCCCCCCEEEEECCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHhCCCEEEcccc---chhHHHHHHHHhCC-CC
Confidence 67788999999999999999999999999997 888888999999999999999998753 23556667777666 89
Q ss_pred ceEEEcccchhhhh
Q psy1413 391 DKTIDCSGIESTIK 404 (408)
Q Consensus 391 d~i~d~~g~~~~~~ 404 (408)
|.+|||+|+...+.
T Consensus 235 d~vi~~~g~~~~~~ 248 (345)
T cd08260 235 HVSVDALGIPETCR 248 (345)
T ss_pred CEEEEcCCCHHHHH
Confidence 99999998654443
No 132
>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase. Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me
Probab=99.79 E-value=7.1e-19 Score=169.97 Aligned_cols=220 Identities=24% Similarity=0.386 Sum_probs=157.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
|.+++||++|++.+. +. ++..+|.++|||++|+|+++|+++..+++||+|+..+.
T Consensus 32 v~~~~i~~~d~~~~~-g~---~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (363)
T cd08279 32 IAAAGLCHSDLHVVT-GD---LPAPLPAVLGHEGAGVVEEVGPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGA 107 (363)
T ss_pred EEEeecCcHHHHHhc-CC---CCCCCCccccccceEEEEEeCCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccc
Confidence 468999999999874 33 33467889999999999999999999999999987431
Q ss_pred --------------------------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEE
Q psy1413 60 --------------------------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVH 106 (408)
Q Consensus 60 --------------------------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vl 106 (408)
+...+...++..|+++++++.+.++....+++........+ .+++++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~vL 187 (363)
T cd08279 108 GILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVRPGDTVA 187 (363)
T ss_pred cccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHHeehhcchhHHHHHHHHhccCCCCCCEEE
Confidence 12233345555666666544444443333333111111222 478899
Q ss_pred EEccCccccccccccccccCc-------------------------------------------ceeEEEccCch---HH
Q psy1413 107 YLTHGQIGDFRLSDPMIVGHE-------------------------------------------ASGIVSKVGAK---VK 140 (408)
Q Consensus 107 v~g~G~vG~~~i~~a~~~G~~-------------------------------------------~~~vv~~~g~~---~~ 140 (408)
|+|+|.+|++++++++.+|+. ++.++++++.. .+
T Consensus 188 I~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~~~g~~~vv~~~~~~~~~~l~~~~~~~~vd~vld~~~~~~~~~~ 267 (363)
T cd08279 188 VIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELARRFGATHTVNASEDDAVEAVRDLTDGRGADYAFEAVGRAATIRQ 267 (363)
T ss_pred EECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHHHhCCeEEeCCCCccHHHHHHHHcCCCCCCEEEEcCCChHHHHH
Confidence 999899999988888877753 22333444421 25
Q ss_pred HHhhccCCcEEEEEccCC--CCcccCHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccchHHH
Q psy1413 141 HLKATRPGGCLVIVGAGS--QDVKIPLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLH 214 (408)
Q Consensus 141 ~~~~l~~gG~iv~~G~~~--~~~~~~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~ 214 (408)
.+++++++|+++.+|... ....++...+..++.++.+.+.. .+.+++++++++++++++.++++++|+++|+.+
T Consensus 268 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~ 347 (363)
T cd08279 268 ALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINE 347 (363)
T ss_pred HHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHH
Confidence 689999999999999765 35566777777788888876532 267899999999999988778899999999999
Q ss_pred HHHHHHcCCC
Q psy1413 215 AFETAKTGAG 224 (408)
Q Consensus 215 a~~~~~~~~~ 224 (408)
|++.+.+++.
T Consensus 348 a~~~~~~~~~ 357 (363)
T cd08279 348 AFADMLAGEN 357 (363)
T ss_pred HHHHHhcCCc
Confidence 9999987653
No 133
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=99.79 E-value=2.9e-18 Score=162.88 Aligned_cols=126 Identities=21% Similarity=0.250 Sum_probs=104.8
Q ss_pred cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413 272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
+|++|..++.+.++++|++++.++++.++ ...++++++ ....+.++++++|+|+ |++|+.++|+|+.+|++ ++++.
T Consensus 92 ~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~-v~~~~ 170 (323)
T cd05282 92 TWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFK-TINVV 170 (323)
T ss_pred cceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCe-EEEEe
Confidence 35667777778899999999987777655 556677776 3356789999999998 99999999999999998 77788
Q ss_pred cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~ 402 (408)
+++++.+.++++|++.++++++ .+..+.+.+.+.++++|.+|||+|+...
T Consensus 171 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vl~~~g~~~~ 220 (323)
T cd05282 171 RRDEQVEELKALGADEVIDSSP----EDLAQRVKEATGGAGARLALDAVGGESA 220 (323)
T ss_pred cChHHHHHHHhcCCCEEecccc----hhHHHHHHHHhcCCCceEEEECCCCHHH
Confidence 8888899999999999998876 5677778888888899999999997654
No 134
>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family. This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,
Probab=99.79 E-value=8.6e-19 Score=167.69 Aligned_cols=226 Identities=31% Similarity=0.423 Sum_probs=164.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------------- 58 (408)
|+++++|++|+..+. +..+. ..+|.++|+|++|+|+++|++++++++||+|+..+
T Consensus 31 v~~~~l~~~d~~~~~-~~~~~--~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (337)
T cd08261 31 VKRVGICGSDLHIYH-GRNPF--ASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQ 107 (337)
T ss_pred EEEEeEcccChHHHc-CCCCc--CCCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCC
Confidence 468999999999874 32221 24578899999999999999999999999998631
Q ss_pred -----------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccccC
Q psy1413 59 -----------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVGH 126 (408)
Q Consensus 59 -----------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~ 126 (408)
.+...... ++..|+++++++.+.+ ....++.... ....+ .+++++|+|+|.+|.+++++++.+|.
T Consensus 108 ~~~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l~~g~~vLI~g~g~vG~~a~~lA~~~g~ 184 (337)
T cd08261 108 VLGVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGVTAGDTVLVVGAGPIGLGVIQVAKARGA 184 (337)
T ss_pred eeeecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 22344445 6677777777444333 2222222111 11122 47789999988999999988887765
Q ss_pred c------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCc
Q psy1413 127 E------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDV 161 (408)
Q Consensus 127 ~------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~ 161 (408)
. ++.+++++|.. .+.+++++++|+++.+|....+.
T Consensus 185 ~v~~~~~s~~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~~ 264 (337)
T cd08261 185 RVIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGPV 264 (337)
T ss_pred eEEEECCCHHHHHHHHHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCCC
Confidence 2 34445555432 25788999999999999776666
Q ss_pred ccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 162 KIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 162 ~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
.++...+..+++++.+..... +.+++++++++++++++.+.+.+.++++++.++++.+.+++....|++++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~ 336 (337)
T cd08261 265 TFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIE 336 (337)
T ss_pred ccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEe
Confidence 667777788899988875444 57899999999999987555889999999999999998776666777765
No 135
>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase.
Probab=99.79 E-value=1.1e-18 Score=164.57 Aligned_cols=212 Identities=20% Similarity=0.254 Sum_probs=155.0
Q ss_pred cceeccceeeecccccCCCCCCcceEEEEeeeeec-CCeEEEEccCcccccc-ccccccccCcceeEEEccCchHHHHhh
Q psy1413 67 PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGIC-GSDVHYLTHGQIGDFR-LSDPMIVGHEASGIVSKVGAKVKHLKA 144 (408)
Q Consensus 67 ~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~-g~~vlv~g~G~vG~~~-i~~a~~~G~~~~~vv~~~g~~~~~~~~ 144 (408)
.++..|+.+.+ +..++|.+.+.++++.+.+++++ ++++.+.. |...... ..++..+|+|+.|+|+.+|+.. .++.
T Consensus 5 ~~~~~~~~l~~-~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~-G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~~v 81 (308)
T TIGR01202 5 IVLSGPNQIEL-REVTLTPPSPGDLVVEIWYSGISTGTEKLFWN-GLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GFRP 81 (308)
T ss_pred EEEeCCCeEEE-EEecCCCCCCCeEEEEEEEEeeccCchhHHhc-CCCCCCCCCCCCccCcceeEEEEEEecCCC-CCCC
Confidence 44566777888 67888888899999999999995 77766542 2111111 2457788999999999999753 2333
Q ss_pred ccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 145 TRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 145 l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
T Consensus 82 -------------------------------------------------------------------------------- 81 (308)
T TIGR01202 82 -------------------------------------------------------------------------------- 81 (308)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CceEEEEEcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhh
Q psy1413 225 NAIKVMIHCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSV 304 (408)
Q Consensus 225 ~~~kvvi~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ 304 (408)
+|+|... +..|..|. ....|+|++|+.++++.++++|++++.+. +.+++..+
T Consensus 82 --------GdrV~~~----~~~c~~~~---------------~~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~~~~~~ 133 (308)
T TIGR01202 82 --------GDRVFVP----GSNCYEDV---------------RGLFGGASKRLVTPASRVCRLDPALGPQG-ALLALAAT 133 (308)
T ss_pred --------CCEEEEe----Cccccccc---------------cccCCcccceEEcCHHHceeCCCCCCHHH-HhhhHHHH
Confidence 7888752 12232221 11369999999999999999999998754 55666788
Q ss_pred hhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHH
Q psy1413 305 GVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIEL 384 (408)
Q Consensus 305 ~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~ 384 (408)
+++++.+. ..++++++|+|+|++|++++|+++.+|++.|+++++++++++.++++ .++|+.+ .
T Consensus 134 a~~~~~~~-~~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~~~---~~i~~~~----~--------- 196 (308)
T TIGR01202 134 ARHAVAGA-EVKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGY---EVLDPEK----D--------- 196 (308)
T ss_pred HHHHHHhc-ccCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhhhc---cccChhh----c---------
Confidence 89888654 34578899998899999999999999999888888877777766543 4555422 1
Q ss_pred hcCCCCceEEEcccchhhhhhcC
Q psy1413 385 LQGEQPDKTIDCSGIESTIKLGM 407 (408)
Q Consensus 385 ~~~~~~d~i~d~~g~~~~~~~~~ 407 (408)
.++++|++|||+|+..+++.++
T Consensus 197 -~~~g~Dvvid~~G~~~~~~~~~ 218 (308)
T TIGR01202 197 -PRRDYRAIYDASGDPSLIDTLV 218 (308)
T ss_pred -cCCCCCEEEECCCCHHHHHHHH
Confidence 2468999999999987766654
No 136
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.78 E-value=1.1e-18 Score=164.92 Aligned_cols=228 Identities=24% Similarity=0.270 Sum_probs=164.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----CcccccCCcceecccee
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----EFRNVCLSPILRRRFSL 75 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----~~~~~~~~~~~~~p~~~ 75 (408)
+.++++|++|++.++.+........+|.++|||++|+|+++|++++.+++||+|+..+ ++...+.+.++..|+++
T Consensus 26 v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~g~~~~~~~v~~~~~~~lP~~~ 105 (312)
T cd08269 26 VEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGLSGGAFAEYDLADADHAVPLPSLL 105 (312)
T ss_pred EEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEecCCcceeeEEEchhheEECCCch
Confidence 4589999999987622221111223588999999999999999999999999999754 44566667788888877
Q ss_pred eecccccCC-CCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCc---------------------------
Q psy1413 76 RFREQKPIE-DPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE--------------------------- 127 (408)
Q Consensus 76 ~~~~~~~lp-~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~--------------------------- 127 (408)
. . ..++ .++.+++.+....--..+++++|+|+|.+|.+++++++.+|++
T Consensus 106 -~-~-~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 182 (312)
T cd08269 106 -D-G-QAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALARELGATEVVTDD 182 (312)
T ss_pred -h-h-hHHhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCceEecCC
Confidence 2 2 1222 2322222111111112478899999889999998888877764
Q ss_pred ----------------ceeEEEccCch---HHHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecCC-----
Q psy1413 128 ----------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRYA----- 182 (408)
Q Consensus 128 ----------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~~----- 182 (408)
++.++++.|.. ...+++++++|+++.+|... .+..+++..+.++++++.+.....
T Consensus 183 ~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (312)
T cd08269 183 SEAIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGL 262 (312)
T ss_pred CcCHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchh
Confidence 33344444432 25689999999999999654 345666667889999988765332
Q ss_pred CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 183 NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 183 ~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
+.+++++++++++++++.+++++.|++++++++++.+.+++...+|+++
T Consensus 263 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~ 311 (312)
T cd08269 263 EGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDGFIKGVI 311 (312)
T ss_pred hHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence 4689999999999998766788999999999999999999877788876
No 137
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.78 E-value=2e-18 Score=164.26 Aligned_cols=220 Identities=29% Similarity=0.401 Sum_probs=168.7
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.+ +..+.+.+.+..+++++...++++.++.+.- + ...-.....+|.++.|.+..+|+..+.++.
T Consensus 13 ~~~~-~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~-~---~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~--------- 78 (325)
T cd08264 13 NLKV-EDVKDPKPGPGEVLIRVKMAGVNPVDYNVIN-A---VKVKPMPHIPGAEFAGVVEEVGDHVKGVKK--------- 78 (325)
T ss_pred ceEE-EeccCCCCCCCeEEEEEEEEEechHHHHHHh-C---CCCCCCCeecccceeEEEEEECCCCCCCCC---------
Confidence 4444 3334455666778888888888776654421 1 111112446789999999999975433333
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 79 -------------------------------------------------------------------------------G 79 (325)
T cd08264 79 -------------------------------------------------------------------------------G 79 (325)
T ss_pred -------------------------------------------------------------------------------C
Confidence 8
Q ss_pred CceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhcc
Q psy1413 234 DRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRA 312 (408)
Q Consensus 234 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~ 312 (408)
|+|...+..+|++|.+|..|++++|++..+.+.. ..|+|++|..++++.++++|+++++++++.++ ...++++++...
T Consensus 80 d~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~ 158 (325)
T cd08264 80 DRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVV-SNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKTA 158 (325)
T ss_pred CEEEECCCcCCCCChhhcCCCccccCccceeecc-CCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHhc
Confidence 8988888889999999999999999986655542 46899999999999999999999988888776 557788888668
Q ss_pred CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413 313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391 (408)
Q Consensus 313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d 391 (408)
.++++++++|+|+ |++|++++++|+.+|++ ++++++ .+.++++|++++++.++ ..+.+++++ +++|
T Consensus 159 ~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~-v~~~~~----~~~~~~~g~~~~~~~~~------~~~~l~~~~--~~~d 225 (325)
T cd08264 159 GLGPGETVVVFGASGNTGIFAVQLAKMMGAE-VIAVSR----KDWLKEFGADEVVDYDE------VEEKVKEIT--KMAD 225 (325)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEeH----HHHHHHhCCCeeecchH------HHHHHHHHh--CCCC
Confidence 8999999999999 99999999999999997 666653 36667899999987643 245566666 5899
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
+++|++|+.
T Consensus 226 ~vl~~~g~~ 234 (325)
T cd08264 226 VVINSLGSS 234 (325)
T ss_pred EEEECCCHH
Confidence 999999964
No 138
>KOG1198|consensus
Probab=99.78 E-value=3e-18 Score=161.98 Aligned_cols=127 Identities=29% Similarity=0.430 Sum_probs=115.7
Q ss_pred CCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hcc------CcCCCCEEEEEec-chhHHHHHHHHHH
Q psy1413 268 PDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRA------GVTLGSKVLITGA-GPIGLVTLLTARA 338 (408)
Q Consensus 268 ~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~------~~~~~~~~lv~G~-G~~G~~~~~~~~~ 338 (408)
...|+|++|.++++..++++|+++++.++|.++ .+.|+|.++ ... .++++.++||+|+ |++|++++|+|+.
T Consensus 101 ~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~ 180 (347)
T KOG1198|consen 101 LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKH 180 (347)
T ss_pred cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHh
Confidence 357999999999999999999999999999888 677788888 445 6999999999998 9999999999999
Q ss_pred hCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 339 LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 339 ~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+|+. .+++.+++++++.++++|||+++|+++ ++..++++..+ +++||+||||+|+.
T Consensus 181 ~~~~-~v~t~~s~e~~~l~k~lGAd~vvdy~~----~~~~e~~kk~~-~~~~DvVlD~vg~~ 236 (347)
T KOG1198|consen 181 AGAI-KVVTACSKEKLELVKKLGADEVVDYKD----ENVVELIKKYT-GKGVDVVLDCVGGS 236 (347)
T ss_pred cCCc-EEEEEcccchHHHHHHcCCcEeecCCC----HHHHHHHHhhc-CCCccEEEECCCCC
Confidence 9976 555668999999999999999999998 99999999999 88999999999985
No 139
>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic
Probab=99.78 E-value=3.1e-18 Score=163.85 Aligned_cols=229 Identities=26% Similarity=0.346 Sum_probs=176.0
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.+ ...++|.+.+.++++.+.++++++.++.+.- |.. .........|.++.|.+..+|.....++.
T Consensus 11 ~~~~-~~~~~p~~~~~evlirv~a~~i~~~d~~~~~-g~~--~~~~~p~~~g~e~~G~V~~vG~~v~~~~~--------- 77 (337)
T cd05283 11 KLEP-FTFERRPLGPDDVDIKITYCGVCHSDLHTLR-NEW--GPTKYPLVPGHEIVGIVVAVGSKVTKFKV--------- 77 (337)
T ss_pred CceE-EeccCCCCCCCeEEEEEEEecccchHHHHhc-CCc--CCCCCCcccCcceeeEEEEECCCCcccCC---------
Confidence 4445 5667888888899999999999877665532 111 11233556789999999999865443443
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 78 -------------------------------------------------------------------------------G 78 (337)
T cd05283 78 -------------------------------------------------------------------------------G 78 (337)
T ss_pred -------------------------------------------------------------------------------C
Confidence 8
Q ss_pred CceeecC-CCcccccccccCCccccccceeecc------cCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhh
Q psy1413 234 DRVAIEP-GVPCRTCTYCKEGRYNLCRQIFFCA------TPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVG 305 (408)
Q Consensus 234 ~~v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~ 305 (408)
++|.+.+ ..+|++|..|..+..++|.+..+.. .....|+|++|+.++++.++++|++++.++++.+. ...++
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta 158 (337)
T cd05283 79 DRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITV 158 (337)
T ss_pred CEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHH
Confidence 8886444 3589999999999999998865542 12346999999999999999999999998888766 55677
Q ss_pred hhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHh
Q psy1413 306 VHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELL 385 (408)
Q Consensus 306 ~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~ 385 (408)
++++....++++++++|.|+|++|++++|+++.+|++ ++.+++++++.+.++++|++.+++.+. .+..+ ..
T Consensus 159 ~~~~~~~~~~~g~~vlV~g~g~vG~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~vi~~~~----~~~~~---~~- 229 (337)
T cd05283 159 YSPLKRNGVGPGKRVGVVGIGGLGHLAVKFAKALGAE-VTAFSRSPSKKEDALKLGADEFIATKD----PEAMK---KA- 229 (337)
T ss_pred HHHHHhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCe-EEEEcCCHHHHHHHHHcCCcEEecCcc----hhhhh---hc-
Confidence 8787666789999999977799999999999999995 888889999999999999999988755 22211 11
Q ss_pred cCCCCceEEEcccchhhhh
Q psy1413 386 QGEQPDKTIDCSGIESTIK 404 (408)
Q Consensus 386 ~~~~~d~i~d~~g~~~~~~ 404 (408)
++++|.+|||+|......
T Consensus 230 -~~~~d~v~~~~g~~~~~~ 247 (337)
T cd05283 230 -AGSLDLIIDTVSASHDLD 247 (337)
T ss_pred -cCCceEEEECCCCcchHH
Confidence 468999999999764333
No 140
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=99.77 E-value=6.4e-18 Score=161.79 Aligned_cols=128 Identities=26% Similarity=0.392 Sum_probs=105.5
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccC----------cCCCCEEEEEec-chhHHHHHHHH
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAG----------VTLGSKVLITGA-GPIGLVTLLTA 336 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~----------~~~~~~~lv~G~-G~~G~~~~~~~ 336 (408)
+|+|++|..++.+.++++|++++.++++.++ +..++++++. ... .+++++++|+|+ |++|+.+++++
T Consensus 96 ~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a 175 (339)
T cd08249 96 NGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLA 175 (339)
T ss_pred CCcccceEEechhheEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHH
Confidence 5778999999999999999999988888777 6778888873 333 378999999998 99999999999
Q ss_pred HHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413 337 RALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404 (408)
Q Consensus 337 ~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~ 404 (408)
+.+|++ ++.+. ++++.+.++++|++.+++.++ .+..+.+++.+. +++|++||++|+...+.
T Consensus 176 ~~~G~~-v~~~~-~~~~~~~~~~~g~~~v~~~~~----~~~~~~l~~~~~-~~~d~vl~~~g~~~~~~ 236 (339)
T cd08249 176 KLAGYK-VITTA-SPKNFDLVKSLGADAVFDYHD----PDVVEDIRAATG-GKLRYALDCISTPESAQ 236 (339)
T ss_pred HHcCCe-EEEEE-CcccHHHHHhcCCCEEEECCC----chHHHHHHHhcC-CCeeEEEEeeccchHHH
Confidence 999997 66665 568888889999999999876 566667777764 68999999999744433
No 141
>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase. Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i
Probab=99.77 E-value=1.7e-18 Score=165.96 Aligned_cols=225 Identities=31% Similarity=0.475 Sum_probs=160.8
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
|+++++|++|+..+. +..+ +..+|.++|||++|+|+++|++++.+++||+|+..+.
T Consensus 31 v~~~~l~~~d~~~~~-g~~~--~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (343)
T cd08235 31 VRACGICGTDVKKIR-GGHT--DLKPPRILGHEIAGEIVEVGDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYK 107 (343)
T ss_pred EEEeeeccccHHHHc-CCCc--cCCCCcccccceEEEEEeeCCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcc
Confidence 468999999999874 3222 2345789999999999999999999999999997531
Q ss_pred ------------cccccCCc-----ceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccc
Q psy1413 60 ------------FRNVCLSP-----ILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPM 122 (408)
Q Consensus 60 ------------~~~~~~~~-----~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~ 122 (408)
+...+... ++..|+++++.+++ ...+..+++.+.....-..+++++|+|+|.+|++++++++
T Consensus 108 ~~~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa-~~~~~~~a~~~l~~~~~~~g~~VlV~g~g~vg~~~~~la~ 186 (343)
T cd08235 108 KFGNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAA-LVEPLACCINAQRKAGIKPGDTVLVIGAGPIGLLHAMLAK 186 (343)
T ss_pred eeccCCCCcceeeEEecccccccccEEECCCCCCHHHHH-hhhHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHH
Confidence 12233333 56666666663332 2223222221111111124788999998899999888887
Q ss_pred cccCc-------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEcc
Q psy1413 123 IVGHE-------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGA 156 (408)
Q Consensus 123 ~~G~~-------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~ 156 (408)
.+|.. ++.++++++.. ...+++++++|+++.+|.
T Consensus 187 ~~g~~~v~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~ 266 (343)
T cd08235 187 ASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGG 266 (343)
T ss_pred HcCCcEEEEECCCHHHHHHHHHhCCcEEecCCccCHHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEec
Confidence 76653 34445555432 256899999999999996
Q ss_pred CCC--CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 157 GSQ--DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 157 ~~~--~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
... ...++...+.++++++.+.+... +.+++++++++++++++.+.+.+.|+++++.++++.+.+++ ..|+++
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~--~~k~vi 342 (343)
T cd08235 267 LPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK--SLKIVI 342 (343)
T ss_pred cCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC--cEEEEe
Confidence 543 35566677888999998877665 77899999999999987666888999999999999999876 567765
No 142
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.77 E-value=1.2e-18 Score=166.67 Aligned_cols=227 Identities=15% Similarity=0.066 Sum_probs=159.6
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCc--cEEEEEeCCCCCCCCCCCEEEEc---cCcccccC-Ccceecc-c
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEA--SGIVSKVGAKVKHLKVDNQTRFV---PEFRNVCL-SPILRRR-F 73 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~--~G~Vv~vG~~v~~~~vGdrV~~~---~~~~~~~~-~~~~~~p-~ 73 (408)
|+++|||+.|++.+. |+.+ ....+|.++|+++ .|.+..+|++++.|++||||+.. .+|...+. ..++..| +
T Consensus 44 v~~~~inp~d~~~~~-g~~~-~~~~~p~~~g~~~~g~~~~~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~~~~lp~~ 121 (338)
T cd08295 44 NLYLSCDPYMRGRMK-GHDD-SLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDHT 121 (338)
T ss_pred EEEEeeCHHHHHhhc-cCCc-cccCCCcCCCCeEeccEEEEEEecCCCCCCCCCEEEecCCceeEEEecchhceeecCCC
Confidence 579999999999874 4311 1235688899864 56666688999999999999853 45556666 5677774 5
Q ss_pred eeeec-ccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccCcc----------------------
Q psy1413 74 SLRFR-EQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGHEA---------------------- 128 (408)
Q Consensus 74 ~~~~~-~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~~~---------------------- 128 (408)
.+++. +.+.++.+..+++.+......+ .|++++|.|+ |++|++++|+++.+|+..
T Consensus 122 ~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~v 201 (338)
T cd08295 122 DVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDA 201 (338)
T ss_pred CCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCcee
Confidence 66664 5666776666665432222223 4789999985 999999999988777631
Q ss_pred ---------------------eeEEEccCchH--HHHhhccCCcEEEEEccCCCC-c-----ccCHHHHHhcCcEEEEee
Q psy1413 129 ---------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-V-----KIPLVLTMTKEIDIRGVF 179 (408)
Q Consensus 129 ---------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~-----~~~~~~~~~~~~~l~g~~ 179 (408)
+.+++++|... +++++++++|+++.+|..... . .++...++++++++.+.+
T Consensus 202 i~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~ 281 (338)
T cd08295 202 FNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFL 281 (338)
T ss_pred EEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEE
Confidence 22233333211 568999999999999965431 1 234567788999998865
Q ss_pred cCC------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 180 RYA------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 180 ~~~------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
... ..++++++++++|++++. +.+.|+|+++.+|++.+.+++. .+|++++
T Consensus 282 ~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~-~GkvVl~ 337 (338)
T cd08295 282 VGDYLHRYPEFLEEMSGYIKEGKLKYV--EDIADGLESAPEAFVGLFTGSN-IGKQVVK 337 (338)
T ss_pred ehhhHHHHHHHHHHHHHHHHCCCeEce--eecccCHHHHHHHHHHHhcCCC-CceEEEE
Confidence 432 236888999999998764 5566999999999999988754 5677664
No 143
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.77 E-value=3.3e-18 Score=163.39 Aligned_cols=226 Identities=21% Similarity=0.282 Sum_probs=155.4
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
+.+++||++|++.+ .|.+. ..++|.++|||++|+|+++|++++.+++||+|++.+..
T Consensus 32 v~~~~i~~~d~~~~-~g~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (334)
T PRK13771 32 VNYAGLCYRDLLQL-QGFYP--RMKYPVILGHEVVGTVEEVGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRL 108 (334)
T ss_pred EEEEeechhhHHHh-cCCCC--CCCCCeeccccceEEEEEeCCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCcccc
Confidence 46899999999877 44322 23568899999999999999999899999999876421
Q ss_pred -------------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEcc-CccccccccccccccC
Q psy1413 61 -------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTH-GQIGDFRLSDPMIVGH 126 (408)
Q Consensus 61 -------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~-G~vG~~~i~~a~~~G~ 126 (408)
...+...++..|+++.+.+.+.++....+++.......-..+++++|.|+ |.+|++++++++.+|+
T Consensus 109 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~~~~~~~~vlI~g~~g~~g~~~~~la~~~g~ 188 (334)
T PRK13771 109 GYGEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAGVKKGETVLVTGAGGGVGIHAIQVAKALGA 188 (334)
T ss_pred ccccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhcCCCCCCEEEEECCCccHHHHHHHHHHHcCC
Confidence 12222334444555544333333333333321111111124788999985 8999999998888776
Q ss_pred cc------------------------------------eeEEEccCchH--HHHhhccCCcEEEEEccCCCCc--ccCHH
Q psy1413 127 EA------------------------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDV--KIPLV 166 (408)
Q Consensus 127 ~~------------------------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~--~~~~~ 166 (408)
.. +.+++++|... +.+++++++|+++.+|...... .++..
T Consensus 189 ~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~ 268 (334)
T PRK13771 189 KVIAVTSSESKAKIVSKYADYVIVGSKFSEEVKKIGGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSPTYSLRLG 268 (334)
T ss_pred EEEEEeCCHHHHHHHHHHHHHhcCchhHHHHHHhcCCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCCCcccCHH
Confidence 42 23344443221 5788999999999999764422 34555
Q ss_pred HHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 167 LTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 167 ~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
..+.+++++.+..... +++++++++++++.++ +++++.|+++++++||+.+.++. ..+|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~-~~~kvv~~ 332 (334)
T PRK13771 269 YIILKDIEIIGHISATKRDVEEALKLVAEGKIK--PVIGAEVSLSEIDKALEELKDKS-RIGKILVK 332 (334)
T ss_pred HHHhcccEEEEecCCCHHHHHHHHHHHHcCCCc--ceEeeeEcHHHHHHHHHHHHcCC-CcceEEEe
Confidence 5567899999876554 7899999999999886 45889999999999999998764 34566554
No 144
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.77 E-value=1e-17 Score=160.05 Aligned_cols=232 Identities=38% Similarity=0.652 Sum_probs=178.9
Q ss_pred cceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEE
Q psy1413 72 RFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCL 151 (408)
Q Consensus 72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~i 151 (408)
+..+.. ...+.|...+..+++++.+.+++..++.+. .|... -..+...|.++.|.+..+|...+.++.
T Consensus 9 ~~~~~~-~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~-~g~~~---~~~p~~~g~~~~G~v~~vG~~v~~~~~------- 76 (334)
T cd08234 9 PGELEV-EEVPVPEPGPDEVLIKVAACGICGTDLHIY-EGEFG---AAPPLVPGHEFAGVVVAVGSKVTGFKV------- 76 (334)
T ss_pred CCceEE-EeccCCCCCCCeEEEEEEEEeEchhhhHHh-cCCCC---CCCCcccccceEEEEEEeCCCCCCCCC-------
Confidence 334444 455667777778888888988887665543 12111 113456788999999988864333333
Q ss_pred EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
T Consensus 77 -------------------------------------------------------------------------------- 76 (334)
T cd08234 77 -------------------------------------------------------------------------------- 76 (334)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhc
Q psy1413 232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRR 311 (408)
Q Consensus 232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~ 311 (408)
+|+|...+...|+.|..|..+++++|.....++.. .+|+|++|+.++++.++++|++++..+++......++++++..
T Consensus 77 -Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~~~~~~a~~~l~~ 154 (334)
T cd08234 77 -GDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVT-RNGGFAEYVVVPAKQVYKIPDNLSFEEAALAEPLSCAVHGLDL 154 (334)
T ss_pred -CCEEEEcCCcCCCCCccccCcChhhCCCcceeccC-CCCcceeEEEecHHHcEECcCCCCHHHHhhhhHHHHHHHHHHh
Confidence 88988888888999999999999999887655432 4799999999999999999999998887766666778887777
Q ss_pred cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413 312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391 (408)
Q Consensus 312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d 391 (408)
..++++++++|+|+|.+|++++++++.+|+++++++++++++.+.++++|++.+++.++ .+..+. +.+.++++|
T Consensus 155 ~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~--~~~~~~~vd 228 (334)
T cd08234 155 LGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELAKKLGATETVDPSR----EDPEAQ--KEDNPYGFD 228 (334)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHhCCeEEecCCC----CCHHHH--HHhcCCCCc
Confidence 78899999999977999999999999999987888888999999999999988888765 223222 344567899
Q ss_pred eEEEcccchhhh
Q psy1413 392 KTIDCSGIESTI 403 (408)
Q Consensus 392 ~i~d~~g~~~~~ 403 (408)
++|||+|.....
T Consensus 229 ~v~~~~~~~~~~ 240 (334)
T cd08234 229 VVIEATGVPKTL 240 (334)
T ss_pred EEEECCCChHHH
Confidence 999999865443
No 145
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=99.77 E-value=1.1e-17 Score=159.35 Aligned_cols=124 Identities=25% Similarity=0.239 Sum_probs=104.8
Q ss_pred cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413 272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
+|++|+.++.+.++++|++++.++++.++ ...++++.+ ....++++++++|+|+ |.+|+.++|+++.+|++ ++.++
T Consensus 94 ~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~-v~~~~ 172 (327)
T PRK10754 94 AYSSVHNVPADKAAILPDAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAK-LIGTV 172 (327)
T ss_pred ceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCE-EEEEe
Confidence 45677777778889999999988877655 556677776 4467889999999987 99999999999999998 78888
Q ss_pred cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+++++.+.++++|++.+++.+. .+..+.+++++.++++|++|||+|+.
T Consensus 173 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vl~~~~~~ 220 (327)
T PRK10754 173 GSAQKAQRAKKAGAWQVINYRE----ENIVERVKEITGGKKVRVVYDSVGKD 220 (327)
T ss_pred CCHHHHHHHHHCCCCEEEcCCC----CcHHHHHHHHcCCCCeEEEEECCcHH
Confidence 8899999999999999998765 56777788888888999999999874
No 146
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.77 E-value=3.1e-18 Score=163.73 Aligned_cols=226 Identities=24% Similarity=0.356 Sum_probs=162.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
|.++++|++|++.+ .+.+. ...++|.++|||++|+|+++|++++.+++||||+..+.
T Consensus 33 v~~~~~~~~d~~~~-~g~~~-~~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (338)
T cd08254 33 VKAAGVCHSDLHIL-DGGVP-TLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQG 110 (338)
T ss_pred EEEEeeccHhHHHH-cCCCc-ccCCCCEeccccccEEEEEECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCC
Confidence 46889999999988 44322 23456889999999999999999999999999986322
Q ss_pred ------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccccC
Q psy1413 60 ------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIVGH 126 (408)
Q Consensus 60 ------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~G~ 126 (408)
+.......++..|+++++.+.+.++.++.+++.+...... ..+++++|.|+|.+|++++++++.+|.
T Consensus 111 ~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vli~g~g~vG~~~~~la~~~G~ 190 (338)
T cd08254 111 MPGLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGA 190 (338)
T ss_pred ccccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCcHHHHHHHHHHHHcCC
Confidence 1122223444556665554444455554444422111111 246788888888899998888876665
Q ss_pred c-----------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcc
Q psy1413 127 E-----------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVK 162 (408)
Q Consensus 127 ~-----------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~ 162 (408)
. ++.+++++|.. .+.+++|+++|+++.+|.......
T Consensus 191 ~V~~~~~s~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 270 (338)
T cd08254 191 AVIAVDIKEEKLELAKELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDKLT 270 (338)
T ss_pred EEEEEcCCHHHHHHHHHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCCCc
Confidence 2 34455555532 267899999999999998766666
Q ss_pred cCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 163 IPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 163 ~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
++...+..++.++.+.+... ..+++++++++++.+++. .+.++++++.++++.+.+++. .+|+++.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~---~~~~~~~~~~~a~~~~~~~~~-~~kvv~~ 337 (338)
T cd08254 271 VDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQ---VETRPLDEIPEVLERLHKGKV-KGRVVLV 337 (338)
T ss_pred cCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCccc---ceeEcHHHHHHHHHHHHcCCc-cceEEEe
Confidence 77778889999999987665 789999999999998864 578999999999999987654 3555543
No 147
>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty
Probab=99.77 E-value=3.4e-18 Score=164.06 Aligned_cols=227 Identities=23% Similarity=0.297 Sum_probs=162.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------------- 58 (408)
+.+++||++|+..+. |... ...+|.++|||++|+|+++|+++..+++||+|+..+
T Consensus 32 v~~~~i~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (345)
T cd08260 32 VEACGVCRSDWHGWQ-GHDP--DVTLPHVPGHEFAGVVVEVGEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQV 108 (345)
T ss_pred EEEeeccHHHHHHhc-CCCC--CCCCCeeeccceeEEEEEECCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCc
Confidence 468999999999884 3322 235688999999999999999999999999998611
Q ss_pred -----------CcccccC--CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccccccccc
Q psy1413 59 -----------EFRNVCL--SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIV 124 (408)
Q Consensus 59 -----------~~~~~~~--~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~ 124 (408)
++...+. ..++..|+++...+.+.++....+++........+ .+++++|.|+|.+|++++++++.+
T Consensus 109 ~~~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~ 188 (345)
T cd08260 109 QPGFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASAL 188 (345)
T ss_pred ccccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHHHHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHc
Confidence 1112222 14555666666544444444444443221111122 467899999999999998888876
Q ss_pred cCc------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCC
Q psy1413 125 GHE------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQ 159 (408)
Q Consensus 125 G~~------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~ 159 (408)
|.. ++.+++++|.. ...+++++++|+++.+|....
T Consensus 189 G~~vi~~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~ 268 (345)
T cd08260 189 GARVIAVDIDDDKLELARELGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLG 268 (345)
T ss_pred CCeEEEEeCCHHHHHHHHHhCCCEEEccccchhHHHHHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCC
Confidence 642 33445555432 156899999999999997653
Q ss_pred C---cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 160 D---VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 160 ~---~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
. ..+++..++.+++++.+..... ..+++++++++++++++.+++++.++++++++||+.+.+++. ..|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~~~~v~ 343 (345)
T cd08260 269 EEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYAT-AGITVI 343 (345)
T ss_pred CCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCC-CceEEe
Confidence 2 4566667779999999987655 789999999999999877778999999999999999997654 334443
No 148
>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional
Probab=99.77 E-value=9.6e-18 Score=160.46 Aligned_cols=229 Identities=30% Similarity=0.472 Sum_probs=175.6
Q ss_pred ccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEEccCC
Q psy1413 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGS 158 (408)
Q Consensus 79 ~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~~ 158 (408)
++.++|.+.+.++++++.+++++..++.+. .|..+. ......|.++.|++..+|+..+.++.
T Consensus 16 ~~~~~p~~~~~evlv~v~~~~i~~~d~~~~-~g~~~~---~~~~~~g~e~~G~V~~~G~~v~~~~~-------------- 77 (338)
T PRK09422 16 VEKTLRPLKHGEALVKMEYCGVCHTDLHVA-NGDFGD---KTGRILGHEGIGIVKEVGPGVTSLKV-------------- 77 (338)
T ss_pred EEecCCCCCCCeEEEEEEEEeechhHHHHH-cCCCCC---CCCccCCcccceEEEEECCCCccCCC--------------
Confidence 556778788888899999999987766543 111111 12345788999999998865332333
Q ss_pred CCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceee
Q psy1413 159 QDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAI 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~ 238 (408)
+++|..
T Consensus 78 --------------------------------------------------------------------------Gd~V~~ 83 (338)
T PRK09422 78 --------------------------------------------------------------------------GDRVSI 83 (338)
T ss_pred --------------------------------------------------------------------------CCEEEE
Confidence 788876
Q ss_pred cC-CCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCC
Q psy1413 239 EP-GVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTL 316 (408)
Q Consensus 239 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~ 316 (408)
.+ ..+|+.|..|..+.++.|.+....+.. .+|+|++|+.++.+.++++|+++++++++.++ ...++++++....+++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~~~~~~~~~ 162 (338)
T PRK09422 84 AWFFEGCGHCEYCTTGRETLCRSVKNAGYT-VDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKAIKVSGIKP 162 (338)
T ss_pred ccCCCCCCCChhhcCCCcccCCCccccCcc-ccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHHHHhcCCCC
Confidence 54 357999999999999999876655442 47999999999999999999999998888776 5677888887788999
Q ss_pred CCEEEEEecchhHHHHHHHHHH-hCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413 317 GSKVLITGAGPIGLVTLLTARA-LGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID 395 (408)
Q Consensus 317 ~~~~lv~G~G~~G~~~~~~~~~-~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d 395 (408)
++++||+|+|++|+.++|+++. +|++ |+++++++++.+.++++|++.++++++. .+..+.+++.++ ++|.+|+
T Consensus 163 g~~vlV~g~g~vG~~~~~la~~~~g~~-v~~~~~~~~~~~~~~~~g~~~v~~~~~~---~~~~~~v~~~~~--~~d~vi~ 236 (338)
T PRK09422 163 GQWIAIYGAGGLGNLALQYAKNVFNAK-VIAVDINDDKLALAKEVGADLTINSKRV---EDVAKIIQEKTG--GAHAAVV 236 (338)
T ss_pred CCEEEEECCcHHHHHHHHHHHHhCCCe-EEEEeCChHHHHHHHHcCCcEEeccccc---ccHHHHHHHhcC--CCcEEEE
Confidence 9999999999999999999998 4996 8889999999999999999999887531 334556666664 6896666
Q ss_pred cccchhhhhhc
Q psy1413 396 CSGIESTIKLG 406 (408)
Q Consensus 396 ~~g~~~~~~~~ 406 (408)
++++...++.+
T Consensus 237 ~~~~~~~~~~~ 247 (338)
T PRK09422 237 TAVAKAAFNQA 247 (338)
T ss_pred eCCCHHHHHHH
Confidence 55555555443
No 149
>cd05281 TDH Threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.77 E-value=2.5e-18 Score=164.75 Aligned_cols=228 Identities=28% Similarity=0.401 Sum_probs=157.0
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
|.++|+|++|++.+...........+|.++|||++|+|+++|+++..+++||+|...+.
T Consensus 32 v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (341)
T cd05281 32 VLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTK 111 (341)
T ss_pred EEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccc
Confidence 45889999999876322111122356788999999999999999999999999987421
Q ss_pred ------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCc
Q psy1413 60 ------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE 127 (408)
Q Consensus 60 ------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~ 127 (408)
+...+...++..|++++. +.+.++.++..++.... .....+++++|.|+|.+|++++++++.+|..
T Consensus 112 ~~~~~~~g~~~~~v~v~~~~~~~lP~~~~~-~~a~~~~~~~~a~~~~~-~~~~~g~~vlV~g~g~vg~~~~~la~~~G~~ 189 (341)
T cd05281 112 ILGVDTDGCFAEYVVVPEENLWKNDKDIPP-EIASIQEPLGNAVHTVL-AGDVSGKSVLITGCGPIGLMAIAVAKAAGAS 189 (341)
T ss_pred eEeccCCCcceEEEEechHHcEECcCCCCH-HHhhhhhHHHHHHHHHH-hcCCCCCEEEEECCCHHHHHHHHHHHHcCCc
Confidence 223333445555665554 33333333322221111 1112578899988889999988888777652
Q ss_pred ------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcc
Q psy1413 128 ------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVK 162 (408)
Q Consensus 128 ------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~ 162 (408)
++.+++++|+. .+.+++|+++|+++.+|.......
T Consensus 190 ~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 269 (341)
T cd05281 190 LVIASDPNPYRLELAKKMGADVVINPREEDVVEVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVD 269 (341)
T ss_pred EEEEECCCHHHHHHHHHhCcceeeCcccccHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcc
Confidence 22334444332 256899999999999997665544
Q ss_pred cCHH-HHHhcCcEEEEeecC--CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 163 IPLV-LTMTKEIDIRGVFRY--ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 163 ~~~~-~~~~~~~~l~g~~~~--~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+++. .+.++++++.+.... .+.+.+++++++++.+++.+++.+.++++++++||+.+.+++ .+|++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~--~gk~vv~ 340 (341)
T cd05281 270 IDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK--CGKVVLY 340 (341)
T ss_pred cccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC--CceEEec
Confidence 4433 477788888876633 256889999999999988777889999999999999998876 5677654
No 150
>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members. This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio
Probab=99.76 E-value=1.3e-17 Score=159.46 Aligned_cols=230 Identities=33% Similarity=0.520 Sum_probs=178.0
Q ss_pred ccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEEccCC
Q psy1413 79 EQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGS 158 (408)
Q Consensus 79 ~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~~ 158 (408)
...+.|...+..+++.+.+.+++..++.+. .|... .........|.++.|.+..+|+..+.++.
T Consensus 17 ~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~-~g~~~-~~~~~~~~~g~~~~G~v~~~G~~v~~~~~-------------- 80 (338)
T cd08254 17 EEVPVPEPGPGEVLVKVKAAGVCHSDLHIL-DGGVP-TLTKLPLTLGHEIAGTVVEVGAGVTNFKV-------------- 80 (338)
T ss_pred eccCCCCCCCCeEEEEEEEEeeccHhHHHH-cCCCc-ccCCCCEeccccccEEEEEECCCCccCCC--------------
Confidence 445666667778888888888877665543 11111 11123446788899999888865333333
Q ss_pred CCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceee
Q psy1413 159 QDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAI 238 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~ 238 (408)
+++|..
T Consensus 81 --------------------------------------------------------------------------Gd~V~~ 86 (338)
T cd08254 81 --------------------------------------------------------------------------GDRVAV 86 (338)
T ss_pred --------------------------------------------------------------------------CCEEEE
Confidence 899988
Q ss_pred cCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCC
Q psy1413 239 EPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTL 316 (408)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~ 316 (408)
.|..+|+.|..|..++.++|......+.. ..|+|++|+.++.+.++++|++++.++++.+. .+.++++++ ....+++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~ 165 (338)
T cd08254 87 PAVIPCGACALCRRGRGNLCLNQGMPGLG-IDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKP 165 (338)
T ss_pred CCCCCCCCChhhhCcCcccCCCCCccccc-cCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCC
Confidence 88889999999999999999766555553 57999999999999999999999988877665 788888887 4456899
Q ss_pred CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413 317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396 (408)
Q Consensus 317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~ 396 (408)
++++||.|+|++|+.++++++.+|++ |+.+++++++.+.++++|++.+++.++ ....+.+ +.+.++++|+++||
T Consensus 166 ~~~vli~g~g~vG~~~~~la~~~G~~-V~~~~~s~~~~~~~~~~g~~~~~~~~~----~~~~~~~-~~~~~~~~D~vid~ 239 (338)
T cd08254 166 GETVLVIGLGGLGLNAVQIAKAMGAA-VIAVDIKEEKLELAKELGADEVLNSLD----DSPKDKK-AAGLGGGFDVIFDF 239 (338)
T ss_pred CCEEEEECCcHHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHhCCCEEEcCCC----cCHHHHH-HHhcCCCceEEEEC
Confidence 99999986699999999999999998 888889999999999999999888765 3444445 55667789999999
Q ss_pred ccchhhhhh
Q psy1413 397 SGIESTIKL 405 (408)
Q Consensus 397 ~g~~~~~~~ 405 (408)
+|....++.
T Consensus 240 ~g~~~~~~~ 248 (338)
T cd08254 240 VGTQPTFED 248 (338)
T ss_pred CCCHHHHHH
Confidence 986654443
No 151
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=99.76 E-value=2.5e-17 Score=154.65 Aligned_cols=125 Identities=27% Similarity=0.358 Sum_probs=109.3
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
|+|++|..++++.++++|++++.++++.++ .+.++++++....++++++++|+|+ |++|+.++|+++.+|++ ++.++
T Consensus 74 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~-v~~~~ 152 (303)
T cd08251 74 GGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKGAE-IYATA 152 (303)
T ss_pred cceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHHhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEc
Confidence 567888899999999999999988888776 6777888887788999999999988 99999999999999997 88888
Q ss_pred cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+++++.+.++++|++.+++... .+..+.+++++.++++|.++|++++.
T Consensus 153 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~i~~~~~~~~~d~v~~~~~~~ 200 (303)
T cd08251 153 SSDDKLEYLKQLGVPHVINYVE----EDFEEEIMRLTGGRGVDVVINTLSGE 200 (303)
T ss_pred CCHHHHHHHHHcCCCEEEeCCC----ccHHHHHHHHcCCCCceEEEECCcHH
Confidence 8888999999999999998766 66777788888888999999999754
No 152
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.76 E-value=1.9e-18 Score=162.82 Aligned_cols=222 Identities=18% Similarity=0.201 Sum_probs=164.6
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~ 74 (408)
+.++|+|++|++... . ..+|.++|||++|+|+++|++++.|++||+|+... ++...+...++..|++
T Consensus 33 v~~~~i~~~d~~~~~-~------~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~ 105 (305)
T cd08270 33 VAAISLNRGELKFAA-E------RPDGAVPGWDAAGVVERAAADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVLPDG 105 (305)
T ss_pred EEEEecCHHHHHhhc-c------CCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEECCCC
Confidence 468999999998763 2 13367899999999999999999999999998653 3446666788889998
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEcc-CccccccccccccccCc--------------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTH-GQIGDFRLSDPMIVGHE-------------------------- 127 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~-G~vG~~~i~~a~~~G~~-------------------------- 127 (408)
+++.+.+.++..+.+++.+........+++++|.|+ |++|++++++++.+|+.
T Consensus 106 ~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 185 (305)
T cd08270 106 VSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGLRELGAAEVVVGG 185 (305)
T ss_pred CCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEecc
Confidence 888666666666555543221112234889999985 89999998888877653
Q ss_pred -------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHh--cCcEEEEeecCC-----CcHHHHHH
Q psy1413 128 -------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMT--KEIDIRGVFRYA-----NDYPIALA 190 (408)
Q Consensus 128 -------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~--~~~~l~g~~~~~-----~~~~~~~~ 190 (408)
++.+++++|... +.+++++++|+++.+|.... ...++...+.. ++.++.+.+... ..++.+++
T Consensus 186 ~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 265 (305)
T cd08270 186 SELSGAPVDLVVDSVGGPQLARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLG 265 (305)
T ss_pred ccccCCCceEEEECCCcHHHHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHH
Confidence 234445554332 67899999999999996543 34566666655 789988877552 56888999
Q ss_pred HHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 191 MVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 191 l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+++++++++. +.+++++++++++|+.+.+++ ..+|++++
T Consensus 266 ~~~~~~i~~~--~~~~~~~~~~~~a~~~~~~~~-~~gkvvi~ 304 (305)
T cd08270 266 LVAAGRLDPR--IGWRGSWTEIDEAAEALLARR-FRGKAVLD 304 (305)
T ss_pred HHHCCCccce--eccEEcHHHHHHHHHHHHcCC-CCceEEEe
Confidence 9999999753 788999999999999998764 34566654
No 153
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=99.76 E-value=1.9e-17 Score=154.01 Aligned_cols=124 Identities=26% Similarity=0.310 Sum_probs=104.6
Q ss_pred cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413 272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
+|++|..++.+.++++|+++++++++.++ ...++++++ ....++++++++|+|+ |++|++++++++.+|++ |+.++
T Consensus 58 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~ 136 (288)
T smart00829 58 SFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAE-VFATA 136 (288)
T ss_pred ceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEe
Confidence 45677777778899999999988888776 566777776 5677889999999997 99999999999999997 88888
Q ss_pred cChhhHHHHHHcCC--CeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 349 ILEHKLKTAKEMGA--DATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 349 ~~~~~~~~~~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+++++.+.++++|+ +.++++++ .+..+.+.+.+.++++|.++|++|+.
T Consensus 137 ~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~~~~ 186 (288)
T smart00829 137 GSPEKRDFLRELGIPDDHIFSSRD----LSFADEILRATGGRGVDVVLNSLAGE 186 (288)
T ss_pred CCHHHHHHHHHcCCChhheeeCCC----ccHHHHHHHHhCCCCcEEEEeCCCHH
Confidence 89999999999998 78888766 56677788877777899999999853
No 154
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=99.75 E-value=3.6e-17 Score=156.01 Aligned_cols=126 Identities=21% Similarity=0.311 Sum_probs=105.8
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~ 347 (408)
|+|++|+.++++.++++|++++.++++.+. ...++++++. ...++++++++|+|+ |++|+.++++++.+|++ ++++
T Consensus 93 g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~-v~~~ 171 (334)
T PTZ00354 93 GGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAA-TIIT 171 (334)
T ss_pred CceeeEEEecHHHcEeCCCCCCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEE
Confidence 456788888888999999999988777665 6677888874 367899999999998 99999999999999998 5667
Q ss_pred ecChhhHHHHHHcCCCeEEecCCCCChHH-HHHHHHHHhcCCCCceEEEcccchh
Q psy1413 348 DILEHKLKTAKEMGADATVLIDRNHSLEE-ISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~-~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
.+++++.+.++++|++.+++... .+ ..+.+++.+.++++|.+|||+|+..
T Consensus 172 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~~d~~i~~~~~~~ 222 (334)
T PTZ00354 172 TSSEEKVDFCKKLAAIILIRYPD----EEGFAPKVKKLTGEKGVNLVLDCVGGSY 222 (334)
T ss_pred eCCHHHHHHHHHcCCcEEEecCC----hhHHHHHHHHHhCCCCceEEEECCchHH
Confidence 88899999998999999998765 33 6777888887789999999998643
No 155
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.75 E-value=3.1e-17 Score=156.71 Aligned_cols=231 Identities=31% Similarity=0.493 Sum_probs=179.1
Q ss_pred ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413 73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV 152 (408)
Q Consensus 73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv 152 (408)
..+.+ ...+.|.+.+..+.+.+..++++..++.+.. |... ........+|.++.|.+..+|+..+.++.
T Consensus 13 ~~~~~-~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~v~~~G~~~~~~~~-------- 81 (342)
T cd08266 13 EVLEY-GDLPEPEPGPDEVLVRVKAAALNHLDLWVRR-GMPG-IKLPLPHILGSDGAGVVEAVGPGVTNVKP-------- 81 (342)
T ss_pred cceeE-eecCCCCCCCCeEEEEEEeeecCHHHHHHhc-CCCC-CCCCCCeecccceEEEEEEeCCCCCCCCC--------
Confidence 34445 3334454556677888888888876665532 2111 01233456788999999988864332333
Q ss_pred EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
T Consensus 82 -------------------------------------------------------------------------------- 81 (342)
T cd08266 82 -------------------------------------------------------------------------------- 81 (342)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-h
Q psy1413 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-R 310 (408)
Q Consensus 233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~ 310 (408)
+|+|+..+..+|+.|.+|.++.+++|.+..++|.. ..|+|++|..++++.++++|+++++++++.++ ...++++++ .
T Consensus 82 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~ 160 (342)
T cd08266 82 GQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEH-VDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVT 160 (342)
T ss_pred CCEEEEccccccccchhhccccccccccccccccc-cCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHH
Confidence 89999888889999999999999999987776653 47899999999999999999999988887776 566777776 5
Q ss_pred ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413 311 RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389 (408)
Q Consensus 311 ~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (408)
...++++++++|+|+ +++|+.++++++.+|++ ++.+++++++.+.+..++.+.+++..+ .+..+.+.+.+.+++
T Consensus 161 ~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~ 235 (342)
T cd08266 161 RARLRPGETVLVHGAGSGVGSAAIQIAKLFGAT-VIATAGSEDKLERAKELGADYVIDYRK----EDFVREVRELTGKRG 235 (342)
T ss_pred hcCCCCCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCeEEecCC----hHHHHHHHHHhCCCC
Confidence 577889999999999 89999999999999998 888888988888888888888887655 566666777766678
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.++|++|+.
T Consensus 236 ~d~~i~~~g~~ 246 (342)
T cd08266 236 VDVVVEHVGAA 246 (342)
T ss_pred CcEEEECCcHH
Confidence 99999999864
No 156
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.75 E-value=4.4e-17 Score=155.27 Aligned_cols=123 Identities=22% Similarity=0.229 Sum_probs=98.6
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
|+|++|..++++.++++|++. .+.+.+.....++++++ ....++++++++|+|+ |++|+.++|+++.+|++ ++.++
T Consensus 94 g~~~s~~~v~~~~~~~ip~~~-~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~-v~~~~ 171 (329)
T cd08250 94 GAFAEYQVVPARHAVPVPELK-PEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCH-VIGTC 171 (329)
T ss_pred cceeEEEEechHHeEECCCCc-chhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCe-EEEEe
Confidence 456778888888899999873 23333444777888887 4467899999999998 99999999999999998 88888
Q ss_pred cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+++++.+.++++|++.+++.+. .+..+.+.+.. ++++|.+||++|+.
T Consensus 172 ~~~~~~~~~~~~g~~~v~~~~~----~~~~~~~~~~~-~~~vd~v~~~~g~~ 218 (329)
T cd08250 172 SSDEKAEFLKSLGCDRPINYKT----EDLGEVLKKEY-PKGVDVVYESVGGE 218 (329)
T ss_pred CcHHHHHHHHHcCCceEEeCCC----ccHHHHHHHhc-CCCCeEEEECCcHH
Confidence 8888899999999999988765 45556666655 46899999999864
No 157
>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.75 E-value=9.9e-18 Score=160.58 Aligned_cols=225 Identities=26% Similarity=0.326 Sum_probs=159.8
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------------- 58 (408)
+.+.++|++|++.+. +.++ .+.+.|.++|||++|+|+++|++++.+++||+|+..+
T Consensus 33 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~V~~vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (341)
T cd08297 33 LEASGVCHTDLHAAL-GDWP-VKPKLPLIGGHEGAGVVVAVGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQ 110 (341)
T ss_pred EEEeecchhHHHHHc-CCCC-cCCCCCccCCcccceEEEEeCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCc
Confidence 358899999999874 3322 1235577899999999999999999999999998642
Q ss_pred ------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccC-ccccccccccccc
Q psy1413 59 ------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHG-QIGDFRLSDPMIV 124 (408)
Q Consensus 59 ------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G-~vG~~~i~~a~~~ 124 (408)
++...+.+.++..|+++++++.+.++....+++..... ..+ .+++++|.|++ .+|++++++++.+
T Consensus 111 ~~~~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~ 189 (341)
T cd08297 111 KNSGYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAM 189 (341)
T ss_pred cccccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHC
Confidence 12234445566667777765555555555554422111 122 47889999855 5999998888877
Q ss_pred cCc------------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEccCCC
Q psy1413 125 GHE------------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQ 159 (408)
Q Consensus 125 G~~------------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~ 159 (408)
|.. ++.++++.++.. +.+++++++|+++.+|....
T Consensus 190 g~~v~~~~~~~~~~~~~~~~g~~~v~~~~~~~~~~~~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~ 269 (341)
T cd08297 190 GLRVIAIDVGDEKLELAKELGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPG 269 (341)
T ss_pred CCeEEEEeCCHHHHHHHHHcCCcEEEcCCCccHHHHHHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCC
Confidence 752 222333233221 57899999999999997654
Q ss_pred C-cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 160 D-VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 160 ~-~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
. .+++...++.+++++.+..... +++++++++++++++++ .+ +.|++++++++|+.+.++. ..+|++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~--~~-~~~~~~~~~~a~~~~~~~~-~~gkvvi~ 340 (341)
T cd08297 270 GFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKP--HI-QVVPLEDLNEVFEKMEEGK-IAGRVVVD 340 (341)
T ss_pred CCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCcc--ee-EEEcHHHHHHHHHHHHcCC-ccceEEEe
Confidence 3 4666677889999999876655 78999999999999864 33 6799999999999998764 45566654
No 158
>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases. This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast
Probab=99.75 E-value=6.8e-18 Score=161.85 Aligned_cols=225 Identities=29% Similarity=0.426 Sum_probs=158.8
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
+.++++|++|+..+... +...+|.++|+|++|+|+++|+++..|++||+|...+.
T Consensus 31 v~~~~~n~~d~~~~~~~----~~~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (343)
T cd08236 31 VKACGICGSDIPRYLGT----GAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYD 106 (343)
T ss_pred EEEEEECccchHhhcCC----CCCCCCcccCcceEEEEEEECCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcc
Confidence 46899999999987422 23346789999999999999999999999999987521
Q ss_pred ------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCc
Q psy1413 60 ------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHE 127 (408)
Q Consensus 60 ------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~ 127 (408)
+...+...++..|+++++.+.+.+ .+..+++.......-..+++++|+|+|.+|++++++++.+|..
T Consensus 107 ~~~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~l~~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~ 185 (343)
T cd08236 107 YIGSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHAVRLAGITLGDTVVVIGAGTIGLLAIQWLKILGAK 185 (343)
T ss_pred eEecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCC
Confidence 223344456666777766444333 2332332211111112467899998888999998888877764
Q ss_pred ------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCc-
Q psy1413 128 ------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDV- 161 (408)
Q Consensus 128 ------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~- 161 (408)
++.+++++|.. ...+++++++|+++.+|......
T Consensus 186 ~v~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 265 (343)
T cd08236 186 RVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVT 265 (343)
T ss_pred EEEEEcCCHHHHHHHHHcCCCEEecCccccHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcc
Confidence 23344444332 25689999999999999765442
Q ss_pred --ccCHHHHHhcCcEEEEeecC------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413 162 --KIPLVLTMTKEIDIRGVFRY------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM 230 (408)
Q Consensus 162 --~~~~~~~~~~~~~l~g~~~~------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv 230 (408)
..++..++.++.++.+.+.. .+.+++++++++++++.+.+.+.+.++++++.++++.+.+++....|++
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v 342 (343)
T cd08236 266 LSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVL 342 (343)
T ss_pred cccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEe
Confidence 23445667889999887643 2458889999999998765668899999999999999998666666665
No 159
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.75 E-value=1.8e-18 Score=164.62 Aligned_cols=219 Identities=15% Similarity=0.102 Sum_probs=152.4
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---CcccccCCcceec----cc
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---EFRNVCLSPILRR----RF 73 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---~~~~~~~~~~~~~----p~ 73 (408)
|+++|||+.|..-. .+. ..+|.++|+|++|+|+++|+ .|++||||.... ++.......+... |+
T Consensus 38 v~a~~~n~~~~~g~----~~~--~~~~~i~G~~~~g~v~~~~~---~~~~GdrV~~~~~~~~~~~~~~~~~~~l~~~~p~ 108 (325)
T TIGR02825 38 ALFLSVDPYMRVAA----KRL--KEGDTMMGQQVARVVESKNV---ALPKGTIVLASPGWTSHSISDGKDLEKLLTEWPD 108 (325)
T ss_pred EEEEecCHHHhccc----CcC--CCCCcEecceEEEEEEeCCC---CCCCCCEEEEecCceeeEEechhheEEccccccC
Confidence 56899999654322 111 23478999999999999774 699999998642 3334444444444 77
Q ss_pred eeeeccc-ccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc-----------------------
Q psy1413 74 SLRFREQ-KPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE----------------------- 127 (408)
Q Consensus 74 ~~~~~~~-~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~----------------------- 127 (408)
.++++++ +.++.++.+++.+......+ .+++++|+| +|++|++++|+++.+|+.
T Consensus 109 ~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~~lGa~~vi 188 (325)
T TIGR02825 109 TLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLKKLGFDVAF 188 (325)
T ss_pred CCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCCEEE
Confidence 7777544 45777766666432222223 478899998 699999999998877751
Q ss_pred -------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-----Ccc--cCHHHHHhcCcEEEEee
Q psy1413 128 -------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-----DVK--IPLVLTMTKEIDIRGVF 179 (408)
Q Consensus 128 -------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-----~~~--~~~~~~~~~~~~l~g~~ 179 (408)
++.+++++|... +++++++++|+++.+|.... ..+ .....+.++++++.+.+
T Consensus 189 ~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 268 (325)
T TIGR02825 189 NYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFI 268 (325)
T ss_pred eccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEE
Confidence 334455555332 67899999999999996432 122 22446788899998876
Q ss_pred cC-------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 180 RY-------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 180 ~~-------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
.. .+.++++++++++|++++. +..+|+|+++.+||+.+.+++. .+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~l~~~g~l~~~--~~~~~~l~~~~~A~~~~~~~~~-~gkvVv 324 (325)
T TIGR02825 269 VNRWQGEVRQKALKELLKWVLEGKIQYK--EYVIEGFENMPAAFMGMLKGEN-LGKTIV 324 (325)
T ss_pred ehhhhhhhhHHHHHHHHHHHHCCCcccc--eeccccHHHHHHHHHHHhcCCC-CCeEEe
Confidence 32 1357889999999999865 5567899999999999998763 456654
No 160
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=99.75 E-value=3.3e-17 Score=152.48 Aligned_cols=124 Identities=27% Similarity=0.299 Sum_probs=103.7
Q ss_pred cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413 272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
+|++|..++.+.++++|++++..+++.++ ...+++.++ ....++++++++|+|+ |++|+.++|+++.+|++ ++.++
T Consensus 62 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~~ 140 (293)
T cd05195 62 AFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAE-VFATV 140 (293)
T ss_pred cccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCE-EEEEe
Confidence 35567777778889999999987777765 566777776 4477899999999987 99999999999999997 88888
Q ss_pred cChhhHHHHHHcC--CCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 349 ILEHKLKTAKEMG--ADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 349 ~~~~~~~~~~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+++++.+.+++.| ++.+++..+ .+..+.+++.+.++++|.++|++|+.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~~~~ 190 (293)
T cd05195 141 GSEEKREFLRELGGPVDHIFSSRD----LSFADGILRATGGRGVDVVLNSLSGE 190 (293)
T ss_pred CCHHHHHHHHHhCCCcceEeecCc----hhHHHHHHHHhCCCCceEEEeCCCch
Confidence 8888888888888 788888765 57778888888788999999999976
No 161
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=99.75 E-value=4e-17 Score=154.15 Aligned_cols=124 Identities=30% Similarity=0.302 Sum_probs=103.0
Q ss_pred cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413 272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
+|++|..++.+.++++|++++..+++.++ ...++++++ ....++++++++|+|+ |++|+.++++++.+|++ ++.++
T Consensus 90 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~-v~~~~ 168 (320)
T cd05286 90 AYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGAT-VIGTV 168 (320)
T ss_pred ceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEEEc
Confidence 34566677777888999999887777555 556677776 4467889999999997 99999999999999997 88888
Q ss_pred cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+++++.+.++++|++.+++.++ .+..+.+++.+.++++|.+|||+|+.
T Consensus 169 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vl~~~~~~ 216 (320)
T cd05286 169 SSEEKAELARAAGADHVINYRD----EDFVERVREITGGRGVDVVYDGVGKD 216 (320)
T ss_pred CCHHHHHHHHHCCCCEEEeCCc----hhHHHHHHHHcCCCCeeEEEECCCcH
Confidence 8889999999999999988766 66777788888778999999999874
No 162
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=99.75 E-value=3.6e-17 Score=155.64 Aligned_cols=124 Identities=25% Similarity=0.326 Sum_probs=100.7
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh---ccCcC-CCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR---RAGVT-LGSKVLITGA-GPIGLVTLLTARALGASR 343 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~---~~~~~-~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~ 343 (408)
+|+|++|..++++.++++|++++.++++.++ ...++++++. +.... .+++++|+|+ |++|+.++|+|+.+|++
T Consensus 95 ~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~- 173 (326)
T cd08289 95 HGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYE- 173 (326)
T ss_pred CCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCe-
Confidence 5789999999999999999999998888777 4455666552 23333 4679999999 99999999999999997
Q ss_pred EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
|+++++++++.+.++++|++.+++.++ .. .+.+++.+ ++++|.+|||+|+.
T Consensus 174 v~~~~~~~~~~~~~~~~g~~~v~~~~~----~~-~~~~~~~~-~~~~d~vld~~g~~ 224 (326)
T cd08289 174 VVASTGKADAADYLKKLGAKEVIPREE----LQ-EESIKPLE-KQRWAGAVDPVGGK 224 (326)
T ss_pred EEEEecCHHHHHHHHHcCCCEEEcchh----HH-HHHHHhhc-cCCcCEEEECCcHH
Confidence 888889999999999999999988754 22 44555554 56899999999874
No 163
>PRK13771 putative alcohol dehydrogenase; Provisional
Probab=99.75 E-value=2.4e-17 Score=157.42 Aligned_cols=223 Identities=32% Similarity=0.507 Sum_probs=173.4
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV 154 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~ 154 (408)
+.+ +..+.|.+.+..+.+++...+++..++... .|... ........|.++.|++..+|+....++.
T Consensus 13 ~~~-~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~-~g~~~--~~~~~~~~g~e~~G~v~~~g~~~~~~~~---------- 78 (334)
T PRK13771 13 YRI-EEVPDPKPGKDEVVIKVNYAGLCYRDLLQL-QGFYP--RMKYPVILGHEVVGTVEEVGENVKGFKP---------- 78 (334)
T ss_pred cEE-EeCCCCCCCCCeEEEEEEEEeechhhHHHh-cCCCC--CCCCCeeccccceEEEEEeCCCCccCCC----------
Confidence 555 455677777888888888888887665432 11110 1122345788999999888864322333
Q ss_pred ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
++
T Consensus 79 ------------------------------------------------------------------------------G~ 80 (334)
T PRK13771 79 ------------------------------------------------------------------------------GD 80 (334)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 88
Q ss_pred ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccC
Q psy1413 235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAG 313 (408)
Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~ 313 (408)
+|+..+..+|+.|.+|..+.++.|+...+++. ..+|+|++|+.++.+.++++|++++.++++.++ ...++++++....
T Consensus 81 ~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~~~~~~ 159 (334)
T PRK13771 81 RVASLLYAPDGTCEYCRSGEEAYCKNRLGYGE-ELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRGLRRAG 159 (334)
T ss_pred EEEECCCCCCcCChhhcCCCcccCcccccccc-ccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHHHHhcC
Confidence 88888778999999999999999998777664 357999999999999999999999988888777 5677888876668
Q ss_pred cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413 314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK 392 (408)
Q Consensus 314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~ 392 (408)
++++++++|+|+ |.+|++++|+++.+|++ ++.+++++++.+.++++ ++.+++.+ +..+.+++. + ++|+
T Consensus 160 ~~~~~~vlI~g~~g~~g~~~~~la~~~g~~-vi~~~~~~~~~~~~~~~-~~~~~~~~------~~~~~v~~~--~-~~d~ 228 (334)
T PRK13771 160 VKKGETVLVTGAGGGVGIHAIQVAKALGAK-VIAVTSSESKAKIVSKY-ADYVIVGS------KFSEEVKKI--G-GADI 228 (334)
T ss_pred CCCCCEEEEECCCccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHH-HHHhcCch------hHHHHHHhc--C-CCcE
Confidence 899999999999 99999999999999998 88888889999888888 77777653 233444443 2 6999
Q ss_pred EEEcccchh
Q psy1413 393 TIDCSGIES 401 (408)
Q Consensus 393 i~d~~g~~~ 401 (408)
+|||+|+..
T Consensus 229 ~ld~~g~~~ 237 (334)
T PRK13771 229 VIETVGTPT 237 (334)
T ss_pred EEEcCChHH
Confidence 999998754
No 164
>cd08234 threonine_DH_like L-threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.
Probab=99.75 E-value=6.1e-18 Score=161.51 Aligned_cols=223 Identities=29% Similarity=0.479 Sum_probs=157.6
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
+.++++|++|++... |. ++..+|.++|+|++|+|+++|++++.+++||+|+..+.
T Consensus 31 v~~~~l~~~d~~~~~-g~---~~~~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (334)
T cd08234 31 VAACGICGTDLHIYE-GE---FGAAPPLVPGHEFAGVVVAVGSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLT 106 (334)
T ss_pred EEEEeEchhhhHHhc-CC---CCCCCCcccccceEEEEEEeCCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcc
Confidence 468999999999874 32 22347889999999999999999999999999986221
Q ss_pred ------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccccC
Q psy1413 60 ------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIVGH 126 (408)
Q Consensus 60 ------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~G~ 126 (408)
+...+.+.++..|+++++.+.+ ...+..+++... .... ..+++++|+|+|.+|.+++++++.+|+
T Consensus 107 ~~~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa-~~~~~~~a~~~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~ 184 (334)
T cd08234 107 AVGVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAA-LAEPLSCAVHGL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGA 184 (334)
T ss_pred eeccCCCCcceeEEEecHHHcEECcCCCCHHHHh-hhhHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC
Confidence 1223334455566666653322 222222222111 1111 247889999988999998888887775
Q ss_pred c-----------------------------------------ceeEEEccCchH---HHHhhccCCcEEEEEccCCC--C
Q psy1413 127 E-----------------------------------------ASGIVSKVGAKV---KHLKATRPGGCLVIVGAGSQ--D 160 (408)
Q Consensus 127 ~-----------------------------------------~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~~--~ 160 (408)
. ++.++++++... ..+++++++|+++.+|.... .
T Consensus 185 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~ 264 (334)
T cd08234 185 SRVTVAEPNEEKLELAKKLGATETVDPSREDPEAQKEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDAR 264 (334)
T ss_pred cEEEEECCCHHHHHHHHHhCCeEEecCCCCCHHHHHHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCC
Confidence 3 233444444321 57899999999999996543 3
Q ss_pred cccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 161 VKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 161 ~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
..+....+..+++++.+.......+++++++++++++++.++++++|++++++++++.+.+ . ..+|+++
T Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~-~~~k~vi 333 (334)
T cd08234 265 VSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-G-GALKVVV 333 (334)
T ss_pred cccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-C-CceEEEe
Confidence 4455555666889998887666789999999999999877778899999999999999998 4 4566664
No 165
>TIGR01751 crot-CoA-red crotonyl-CoA reductase. The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.
Probab=99.74 E-value=7.4e-18 Score=164.85 Aligned_cols=230 Identities=18% Similarity=0.187 Sum_probs=155.3
Q ss_pred CCeeeecccchhhhhcCCCCC------C-CCCCC-ccccCCccEEEEEeCCCCCCCCCCCEEEEccCc------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGD------F-RLSDP-MIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF------------ 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~------~-~~~~P-~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~------------ 60 (408)
+.++|+|++|++......+.. + +...| .++|||++|+|+++|++++.+++||+|++.+..
T Consensus 44 v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~ 123 (398)
T TIGR01751 44 VMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHIIGSDASGVVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGD 123 (398)
T ss_pred EEEEecCchhhhhhcCCccchhhhhcccCCCCCCceecccceEEEEEEeCCCCCCCCCCCEEEEccccccCCchhhccCc
Confidence 358999999998763221100 0 00223 379999999999999999999999999875421
Q ss_pred ----------------------ccccCCcceeccceeeecccccCCCCCCcceEEEEe--eeee-cCCeEEEEcc-Cccc
Q psy1413 61 ----------------------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMH--CVGI-CGSDVHYLTH-GQIG 114 (408)
Q Consensus 61 ----------------------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~--~~~~-~g~~vlv~g~-G~vG 114 (408)
.......++..|+++++++.+.++....+++.+... ...+ .+++++|+|+ |.+|
T Consensus 124 ~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG 203 (398)
T TIGR01751 124 PMLSSEQRIWGYETNFGSFAEFALVKDYQLMPKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLG 203 (398)
T ss_pred cccccccccccccCCCccceEEEEechHHeEECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHH
Confidence 122222334445555543333333333333321111 1112 4688999995 9999
Q ss_pred cccccccccccCc----------------------------------------------------------------cee
Q psy1413 115 DFRLSDPMIVGHE----------------------------------------------------------------ASG 130 (408)
Q Consensus 115 ~~~i~~a~~~G~~----------------------------------------------------------------~~~ 130 (408)
++++++++.+|+. ++.
T Consensus 204 ~~ai~~ak~~G~~vi~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~ 283 (398)
T TIGR01751 204 SYATQLARAGGGNPVAVVSSPEKAEYCRELGAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDI 283 (398)
T ss_pred HHHHHHHHHcCCeEEEEcCCHHHHHHHHHcCCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceE
Confidence 9998888877663 223
Q ss_pred EEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeee
Q psy1413 131 IVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHN 206 (408)
Q Consensus 131 vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~ 206 (408)
+++++|... ..+++++++|+++.+|.... +..++...+++++.++.+..... +++++++++++++++++ +++++
T Consensus 284 vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~ 361 (398)
T TIGR01751 284 VFEHPGRATFPTSVFVCRRGGMVVICGGTTGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDP--TLSKV 361 (398)
T ss_pred EEECCcHHHHHHHHHhhccCCEEEEEccccCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCccc--ceeeE
Confidence 344444221 56889999999999997654 35667777888899998887665 66889999999998874 48899
Q ss_pred eccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 207 YLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 207 ~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+++++++++|+.+.++.. .+|+++..
T Consensus 362 ~~l~~~~~a~~~~~~~~~-~gkvvv~~ 387 (398)
T TIGR01751 362 YPLEEIGQAHQDVHRNHH-QGNVAVLV 387 (398)
T ss_pred EcHHHHHHHHHHHHcCCC-CceEEEEe
Confidence 999999999999987654 45666553
No 166
>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin
Probab=99.74 E-value=3e-17 Score=156.19 Aligned_cols=206 Identities=24% Similarity=0.293 Sum_probs=155.2
Q ss_pred ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHH-HhhccCCcEE
Q psy1413 73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKH-LKATRPGGCL 151 (408)
Q Consensus 73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~-~~~l~~gG~i 151 (408)
+.+.+ +..+.|.+.+.++++.+.++++++.++.+. .|.... .......+|.++.|++..+|+.... ++.
T Consensus 16 ~~~~~-~~~~~p~~~~~evlv~v~~~gi~~~d~~~~-~g~~~~-~~~~p~v~G~e~~G~V~~vG~~v~~~~~v------- 85 (324)
T cd08291 16 KELSL-PEPEVPEPGPGEVLIKVEAAPINPSDLGFL-KGQYGS-TKALPVPPGFEGSGTVVAAGGGPLAQSLI------- 85 (324)
T ss_pred cEEEe-cccCCCCCCCCeEEEEEEEccCCHHHHHHh-cCcCCC-CCCCCcCCCcceEEEEEEECCCccccCCC-------
Confidence 35666 566778888889999999999988776553 121111 1123467899999999999965332 333
Q ss_pred EEEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 152 VIVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 152 v~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
T Consensus 86 -------------------------------------------------------------------------------- 85 (324)
T cd08291 86 -------------------------------------------------------------------------------- 85 (324)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred EcCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh
Q psy1413 232 HCDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR 310 (408)
Q Consensus 232 ~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~ 310 (408)
+|+|...+ ..+|+|++|+.++++.++++|+++++++++.++ ...+++..+.
T Consensus 86 -Gd~V~~~~---------------------------~~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~ 137 (324)
T cd08291 86 -GKRVAFLA---------------------------GSYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLE 137 (324)
T ss_pred -CCEEEecC---------------------------CCCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHH
Confidence 77775321 115999999999999999999999988887554 3445554444
Q ss_pred ccCcCCCCEEEEE-ec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413 311 RAGVTLGSKVLIT-GA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGE 388 (408)
Q Consensus 311 ~~~~~~~~~~lv~-G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~ 388 (408)
.... ++++++|+ |+ |++|++++|+++.+|++ ++++++++++++.++++|+++++++++ .++.+.+++++.++
T Consensus 138 ~~~~-~~~~vlv~~~g~g~vG~~a~q~a~~~G~~-vi~~~~~~~~~~~~~~~g~~~~i~~~~----~~~~~~v~~~~~~~ 211 (324)
T cd08291 138 TARE-EGAKAVVHTAAASALGRMLVRLCKADGIK-VINIVRRKEQVDLLKKIGAEYVLNSSD----PDFLEDLKELIAKL 211 (324)
T ss_pred hhcc-CCCcEEEEccCccHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCcEEEECCC----ccHHHHHHHHhCCC
Confidence 4444 45555565 66 99999999999999997 888889999999999999999999876 67778888888888
Q ss_pred CCceEEEcccchhh
Q psy1413 389 QPDKTIDCSGIEST 402 (408)
Q Consensus 389 ~~d~i~d~~g~~~~ 402 (408)
++|++||++|+...
T Consensus 212 ~~d~vid~~g~~~~ 225 (324)
T cd08291 212 NATIFFDAVGGGLT 225 (324)
T ss_pred CCcEEEECCCcHHH
Confidence 99999999997654
No 167
>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family. This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo
Probab=99.74 E-value=6.6e-18 Score=160.67 Aligned_cols=214 Identities=19% Similarity=0.209 Sum_probs=150.4
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcc-------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFR------------------- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~------------------- 61 (408)
+.++|+|++|++.+. +. ....+|.++|||++|+|+++|++++.+++||+|+..+...
T Consensus 33 v~~~~i~~~d~~~~~-~~---~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~ 108 (325)
T cd08264 33 VKMAGVNPVDYNVIN-AV---KVKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGG 108 (325)
T ss_pred EEEEEechHHHHHHh-CC---CCCCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccc
Confidence 458999999999874 32 1224578999999999999999999999999998764221
Q ss_pred --------------cccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-Ccccccccccccccc
Q psy1413 62 --------------NVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVG 125 (408)
Q Consensus 62 --------------~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G 125 (408)
..+...++..|+++++++.+.++....+++..... ..+ .+++++|+|+ |++|++++++++.+|
T Consensus 109 ~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G 187 (325)
T cd08264 109 IIGVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMG 187 (325)
T ss_pred eeeccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 12222334445555543344444333333221111 222 4788999985 999999999988877
Q ss_pred Ccc----------------------------------eeEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCHHHH
Q psy1413 126 HEA----------------------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPLVLT 168 (408)
Q Consensus 126 ~~~----------------------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~ 168 (408)
... +.+++++|... +++++++++|+++.+|... ....+++..+
T Consensus 188 ~~v~~~~~~~~~~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~ 267 (325)
T cd08264 188 AEVIAVSRKDWLKEFGADEVVDYDEVEEKVKEITKMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDL 267 (325)
T ss_pred CeEEEEeHHHHHHHhCCCeeecchHHHHHHHHHhCCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCCCCccCHHHH
Confidence 642 23344444321 5789999999999999753 3467777788
Q ss_pred HhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCC
Q psy1413 169 MTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGA 223 (408)
Q Consensus 169 ~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~ 223 (408)
+.++.++.+.+... ++++++++++...+ ..++++|+++|+++||+.+.+++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~----~~~~~~~~~~~~~~a~~~~~~~~ 319 (325)
T cd08264 268 YSKQISIIGSTGGTRKELLELVKIAKDLK----VKVWKTFKLEEAKEALKELFSKE 319 (325)
T ss_pred hhcCcEEEEccCCCHHHHHHHHHHHHcCC----ceeEEEEcHHHHHHHHHHHHcCC
Confidence 88999999987665 78999999996433 24779999999999999998754
No 168
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.74 E-value=8.3e-17 Score=153.38 Aligned_cols=226 Identities=36% Similarity=0.558 Sum_probs=176.1
Q ss_pred ceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEE
Q psy1413 73 FSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLV 152 (408)
Q Consensus 73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv 152 (408)
+.+.+ +..+.|.+.+..+++.+.+.++++.++.+.- |... .......+|.++.|.+..+|+....++.
T Consensus 11 ~~~~~-~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~-------- 78 (332)
T cd08259 11 KPLQI-EEVPDPEPGPGEVLIKVKAAGVCYRDLLFWK-GFFP--RGKYPLILGHEIVGTVEEVGEGVERFKP-------- 78 (332)
T ss_pred CceEE-EEccCCCCCCCeEEEEEEEEecchhhhHHhc-CCCC--CCCCCeeccccceEEEEEECCCCccCCC--------
Confidence 44555 4556677777888888889988877665531 1110 1122356788999999988864332333
Q ss_pred EEccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 153 IVGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 153 ~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
T Consensus 79 -------------------------------------------------------------------------------- 78 (332)
T cd08259 79 -------------------------------------------------------------------------------- 78 (332)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR 311 (408)
Q Consensus 233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~ 311 (408)
+|+|+.....+|+.|..|..+.+++|.+...++. ...|+|++|+.++.+.++++|+++++++++.++ ...++++++..
T Consensus 79 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~ 157 (332)
T cd08259 79 GDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGE-EVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKR 157 (332)
T ss_pred CCEEEECCCCCCcCChhhhCCCcccCCCcccccc-ccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHH
Confidence 8899888888899999999999999998755553 357999999999999999999999988887766 67778888866
Q ss_pred cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413 312 AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP 390 (408)
Q Consensus 312 ~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
..++++++++|+|+ |++|+.++++++..|++ ++.+++++++.+.++++|++.+++.. +..+.+.+.. ++
T Consensus 158 ~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~---~~ 227 (332)
T cd08259 158 AGVKKGDTVLVTGAGGGVGIHAIQLAKALGAR-VIAVTRSPEKLKILKELGADYVIDGS------KFSEDVKKLG---GA 227 (332)
T ss_pred hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHcCCcEEEecH------HHHHHHHhcc---CC
Confidence 78899999999998 99999999999999998 78788888888888889988877542 2444555443 79
Q ss_pred ceEEEcccchh
Q psy1413 391 DKTIDCSGIES 401 (408)
Q Consensus 391 d~i~d~~g~~~ 401 (408)
|++||++|+..
T Consensus 228 d~v~~~~g~~~ 238 (332)
T cd08259 228 DVVIELVGSPT 238 (332)
T ss_pred CEEEECCChHH
Confidence 99999998754
No 169
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.74 E-value=1.2e-17 Score=159.11 Aligned_cols=216 Identities=21% Similarity=0.226 Sum_probs=152.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------------- 58 (408)
+.++|+|++|++.+. |.++. ..+|.++|||++|+|+++|+++.++++||+|.+.+
T Consensus 36 v~~~~i~~~d~~~~~-g~~~~--~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (329)
T cd08298 36 VEACGVCRTDLHIVE-GDLPP--PKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNA 112 (329)
T ss_pred EEEEeccHHHHHHHh-CCCCC--CCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCc
Confidence 458999999999884 43221 35688999999999999999999999999997632
Q ss_pred ------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413 59 ------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG 125 (408)
Q Consensus 59 ------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G 125 (408)
++...+...++..|+++++.+.+.++.++.+++.+. ....+ .+++++|+|+|++|++++++++..|
T Consensus 113 ~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~~~~vlV~g~g~vg~~~~~la~~~g 191 (329)
T cd08298 113 RFTGYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKPGQRLGLYGFGASAHLALQIARYQG 191 (329)
T ss_pred cccccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCCCCEEEEECCcHHHHHHHHHHHHCC
Confidence 112333344555666666655555555555554332 22222 4788999999999999988888777
Q ss_pred Ccc--------------------------------eeEEEccCch---HHHHhhccCCcEEEEEccCCC-CcccCHHHHH
Q psy1413 126 HEA--------------------------------SGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQ-DVKIPLVLTM 169 (408)
Q Consensus 126 ~~~--------------------------------~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~ 169 (408)
.+. +.+++..+.. .+.+++++++|+++.+|.... ...+++.. +
T Consensus 192 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~ 270 (329)
T cd08298 192 AEVFAFTRSGEHQELARELGADWAGDSDDLPPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSDIPAFDYEL-L 270 (329)
T ss_pred CeEEEEcCChHHHHHHHHhCCcEEeccCccCCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCCCCccchhh-h
Confidence 632 2233322221 267899999999999986432 22333333 5
Q ss_pred hcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 170 TKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 170 ~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
.++..+.+..... ..+++++++++++.+++ +++.|+++++++||+.+.+++.
T Consensus 271 ~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~ 323 (329)
T cd08298 271 WGEKTIRSVANLTRQDGEEFLKLAAEIPIKP---EVETYPLEEANEALQDLKEGRI 323 (329)
T ss_pred hCceEEEEecCCCHHHHHHHHHHHHcCCCCc---eEEEEeHHHHHHHHHHHHcCCC
Confidence 6788888887665 67899999999998865 3689999999999999987643
No 170
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=99.74 E-value=8.3e-17 Score=152.45 Aligned_cols=127 Identities=31% Similarity=0.412 Sum_probs=107.8
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI 346 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~ 346 (408)
.|++++|...+++.++++|++++.++++.++ +..++++.+. ...++++++++|+|+ |++|+.++++++.+|++ |++
T Consensus 96 ~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~-v~~ 174 (325)
T cd08253 96 QGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGAR-VIA 174 (325)
T ss_pred CcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCE-EEE
Confidence 3567788888888999999999988877766 6777888874 478899999999998 99999999999999987 888
Q ss_pred EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
+++++++.+.++++|++.+++... .+..+.+.+++.++++|.++||+|+..
T Consensus 175 ~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~~~~~ 225 (325)
T cd08253 175 TASSAEGAELVRQAGADAVFNYRA----EDLADRILAATAGQGVDVIIEVLANVN 225 (325)
T ss_pred EeCCHHHHHHHHHcCCCEEEeCCC----cCHHHHHHHHcCCCceEEEEECCchHH
Confidence 888899999898899999988765 556666777777778999999998754
No 171
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.74 E-value=5.5e-17 Score=153.07 Aligned_cols=232 Identities=37% Similarity=0.678 Sum_probs=176.1
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.+ +..+.|.+....+++.+...+++..++.+.- |... ........|.++.|++..+|+....++.
T Consensus 13 ~~~~-~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~-g~~~--~~~~p~~~G~e~~G~V~~vG~~v~~~~~--------- 79 (306)
T cd08258 13 NVEL-REVPEPEPGPGEVLIKVAAAGICGSDLHIYK-GDYD--PVETPVVLGHEFSGTIVEVGPDVEGWKV--------- 79 (306)
T ss_pred ceEE-eecCCCCCCCCeEEEEEEEEEechhhHHHHc-CCCC--cCCCCeeeccceEEEEEEECCCcCcCCC---------
Confidence 4556 5667777777888888888888766654421 1110 0122345788999999999865433333
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 80 -------------------------------------------------------------------------------G 80 (306)
T cd08258 80 -------------------------------------------------------------------------------G 80 (306)
T ss_pred -------------------------------------------------------------------------------C
Confidence 7
Q ss_pred CceeecCC-CcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhh-hc
Q psy1413 234 DRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHAC-RR 311 (408)
Q Consensus 234 ~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~-~~ 311 (408)
|+|...+. .+|+.|..|..+..+.|.....++. ...|+|++|+.++++.++++|+++++++++...+..++++++ ..
T Consensus 81 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~a~~~l~~~ 159 (306)
T cd08258 81 DRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGT-QADGGFAEYVLVPEESLHELPENLSLEAAALTEPLAVAVHAVAER 159 (306)
T ss_pred CEEEEccCcCCCCCCcchhCcCcccCCCCceeee-cCCCceEEEEEcchHHeEECcCCCCHHHHHhhchHHHHHHHHHHh
Confidence 88877664 5799999999999999987544432 346999999999999999999999988887555778888887 55
Q ss_pred cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEE--ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413 312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVIT--DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389 (408)
Q Consensus 312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~--~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (408)
..+++++++||.|+|++|++++|+++.+|++ |+.+ ++++++.+.++++|++.+ +++. .+..+.+.+.+.+++
T Consensus 160 ~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~-v~~~~~~~~~~~~~~~~~~g~~~~-~~~~----~~~~~~l~~~~~~~~ 233 (306)
T cd08258 160 SGIRPGDTVVVFGPGPIGLLAAQVAKLQGAT-VVVVGTEKDEVRLDVAKELGADAV-NGGE----EDLAELVNEITDGDG 233 (306)
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCCE-EEEECCCCCHHHHHHHHHhCCccc-CCCc----CCHHHHHHHHcCCCC
Confidence 7788999999976699999999999999998 6665 334567788889999888 7765 667777777777789
Q ss_pred CceEEEcccchhhhh
Q psy1413 390 PDKTIDCSGIESTIK 404 (408)
Q Consensus 390 ~d~i~d~~g~~~~~~ 404 (408)
+|.+|||+|+.....
T Consensus 234 vd~vld~~g~~~~~~ 248 (306)
T cd08258 234 ADVVIECSGAVPALE 248 (306)
T ss_pred CCEEEECCCChHHHH
Confidence 999999998654443
No 172
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.74 E-value=8e-18 Score=156.42 Aligned_cols=208 Identities=21% Similarity=0.192 Sum_probs=150.9
Q ss_pred CCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---CcccccCCcceeccceeeecccccCCCCCCcceEEEEe
Q psy1413 20 GDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMH 96 (408)
Q Consensus 20 ~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~ 96 (408)
|..+.++|.++|||++|+|+++|++++++++||||+... ++...+...++..|+++++++.+.+ ....+++....
T Consensus 14 ~~~~~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~- 91 (277)
T cd08255 14 GTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANLLVPLPDGLPPERAALT-ALAATALNGVR- 91 (277)
T ss_pred cCccCcCCcccCcceeEEEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-
Confidence 456778999999999999999999999999999998754 4556666778888888887554444 34434332211
Q ss_pred eeee-cCCeEEEEccCccccccccccccccCc------------------------------------ceeEEEccCch-
Q psy1413 97 CVGI-CGSDVHYLTHGQIGDFRLSDPMIVGHE------------------------------------ASGIVSKVGAK- 138 (408)
Q Consensus 97 ~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G~~------------------------------------~~~vv~~~g~~- 138 (408)
...+ .+++++|+|+|.+|++++++++.+|.. ++.++++++..
T Consensus 92 ~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~d~vl~~~~~~~ 171 (277)
T cd08255 92 DAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRELAEALGPADPVAADTADEIGGRGADVVIEASGSPS 171 (277)
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHHHcCCCccccccchhhhcCCCCCEEEEccCChH
Confidence 1222 478899999999999998888877754 22334443432
Q ss_pred --HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecC-------------CCcHHHHHHHHHcCCCCCCCce
Q psy1413 139 --VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY-------------ANDYPIALAMVASGKVDVKKLI 203 (408)
Q Consensus 139 --~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~-------------~~~~~~~~~l~~~g~~~~~~~i 203 (408)
...+++++++|+++.+|............+..+.+++.+.... .+.+++++++++++++. +++
T Consensus 172 ~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~--~~~ 249 (277)
T cd08255 172 ALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEEALDLLAEGRLE--ALI 249 (277)
T ss_pred HHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEeecccccccccccccccccccHHHHHHHHHcCCcc--ccc
Confidence 1578999999999999976554212223456677777765422 14589999999999864 457
Q ss_pred eeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 204 THNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 204 ~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
.+.|+++++++||+.+.+++...+|+++
T Consensus 250 ~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 250 THRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred cCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 8999999999999999988777777753
No 173
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=99.73 E-value=9.4e-17 Score=154.33 Aligned_cols=121 Identities=26% Similarity=0.338 Sum_probs=95.5
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcC----CCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVT----LGSKVLITGA-GPIGLVTLLTARALGASR 343 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~----~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~ 343 (408)
|+|++|..++++.++++|++++.+.++.++ ...++++++. ...+. ++++++|+|+ |++|+.++++++.+|++
T Consensus 111 g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~- 189 (350)
T cd08248 111 GTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAH- 189 (350)
T ss_pred ccceeEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCe-
Confidence 567788899999999999999988887776 5667787763 34444 4999999998 99999999999999997
Q ss_pred EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
++.+.++ ++.+.++++|++.+++..+ .+..+.+. ..+++|.+||++|+.
T Consensus 190 v~~~~~~-~~~~~~~~~g~~~~~~~~~----~~~~~~l~---~~~~vd~vi~~~g~~ 238 (350)
T cd08248 190 VTTTCST-DAIPLVKSLGADDVIDYNN----EDFEEELT---ERGKFDVILDTVGGD 238 (350)
T ss_pred EEEEeCc-chHHHHHHhCCceEEECCC----hhHHHHHH---hcCCCCEEEECCChH
Confidence 6666654 5777888899999988765 33444333 346899999999976
No 174
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=99.73 E-value=1e-16 Score=151.86 Aligned_cols=124 Identities=26% Similarity=0.328 Sum_probs=103.7
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc-cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR-AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI 346 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~-~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~ 346 (408)
+|+|++|..++++.++++|+++++++++.++ +..++++++.. ..++++++++|+|+ |++|+.++|+++.+|++ |+.
T Consensus 94 ~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~-v~~ 172 (320)
T cd08243 94 DGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGAT-VTA 172 (320)
T ss_pred CcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCE-EEE
Confidence 4778899999999999999999988777666 67788888743 56889999999998 99999999999999998 888
Q ss_pred EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
+.+++++.+.++++|++.+++. . .+..+.+++. ++++|.++||+|+..
T Consensus 173 ~~~~~~~~~~~~~~g~~~~~~~-~----~~~~~~i~~~--~~~~d~vl~~~~~~~ 220 (320)
T cd08243 173 TTRSPERAALLKELGADEVVID-D----GAIAEQLRAA--PGGFDKVLELVGTAT 220 (320)
T ss_pred EeCCHHHHHHHHhcCCcEEEec-C----ccHHHHHHHh--CCCceEEEECCChHH
Confidence 8888999999999999888754 3 3455556666 578999999999743
No 175
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=99.72 E-value=3e-17 Score=156.45 Aligned_cols=225 Identities=24% Similarity=0.306 Sum_probs=155.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
|+++++|++|++.+. |.+. ...+|.++|||++|+|+++|++++.+++||+|+....
T Consensus 32 v~~~~i~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 108 (332)
T cd08259 32 VKAAGVCYRDLLFWK-GFFP--RGKYPLILGHEIVGTVEEVGEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRA 108 (332)
T ss_pred EEEEecchhhhHHhc-CCCC--CCCCCeeccccceEEEEEECCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCcc
Confidence 468999999999884 4322 2356889999999999999999999999999987641
Q ss_pred ------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeeecCCeEEEEc-cCccccccccccccccC
Q psy1413 60 ------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLT-HGQIGDFRLSDPMIVGH 126 (408)
Q Consensus 60 ------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g-~G~vG~~~i~~a~~~G~ 126 (408)
+...+...++..|+++++++.+.++....+++......--..+++++|+| .|.+|+++++.++..|.
T Consensus 109 ~~~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~ 188 (332)
T cd08259 109 EYGEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGA 188 (332)
T ss_pred ccccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHHHHHhCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence 12233344555566666544444444433333221111112467899988 58999998888877765
Q ss_pred c-------------------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-cccCHH
Q psy1413 127 E-------------------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-VKIPLV 166 (408)
Q Consensus 127 ~-------------------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~~~~~~ 166 (408)
. .+.+++++|... +.+++++++|+++.+|..... ..++..
T Consensus 189 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~ 268 (332)
T cd08259 189 RVIAVTRSPEKLKILKELGADYVIDGSKFSEDVKKLGGADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDPAPLRPG 268 (332)
T ss_pred eEEEEeCCHHHHHHHHHcCCcEEEecHHHHHHHHhccCCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCCcCCCHH
Confidence 3 223344444321 568899999999999965432 223444
Q ss_pred HHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 167 LTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 167 ~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
...+++..+.+..... .++++++++++++.++ +++++.|+++++++||+.+.++.. .+|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~a~~~~~~~~~-~~kvv~ 331 (332)
T cd08259 269 LLILKEIRIIGSISATKADVEEALKLVKEGKIK--PVIDRVVSLEDINEALEDLKSGKV-VGRIVL 331 (332)
T ss_pred HHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCc--cceeEEEcHHHHHHHHHHHHcCCc-ccEEEe
Confidence 4557888888876554 7789999999999875 458899999999999999997653 345554
No 176
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=99.72 E-value=1.6e-16 Score=152.85 Aligned_cols=132 Identities=23% Similarity=0.270 Sum_probs=100.2
Q ss_pred CccceeEEeeccc----eeeeCCCCCCcccccccc-hhhhhhhhhhcc--CcCCCCEEEEEec-chhHHHHHHHHHHhCC
Q psy1413 270 HGNLSRYYRHAAD----FCHKLPDHVSLEEGALLE-PLSVGVHACRRA--GVTLGSKVLITGA-GPIGLVTLLTARALGA 341 (408)
Q Consensus 270 ~g~~~~~~~~~~~----~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~--~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga 341 (408)
.|+|++|+.+++. .++++|++++.++++.++ ...++++++... .++++++++|+|+ |++|+.++|+|+.+|.
T Consensus 98 ~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~ 177 (352)
T cd08247 98 QGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYN 177 (352)
T ss_pred CceeeEEEEEccccccceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCC
Confidence 4678889998887 789999999998888776 566788887554 5899999999999 8999999999998754
Q ss_pred -CeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413 342 -SRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 342 -~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~ 402 (408)
++++.+. ++++.+.++++|++.+++.++..+.+...+.++..++++++|.+|||+|+...
T Consensus 178 ~~~v~~~~-~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~ 238 (352)
T cd08247 178 IGTVVGTC-SSRSAELNKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDL 238 (352)
T ss_pred cceEEEEe-ChhHHHHHHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHH
Confidence 4577665 45556677889999999876521100234444444446789999999998544
No 177
>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD). These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha
Probab=99.72 E-value=7.1e-17 Score=153.88 Aligned_cols=157 Identities=27% Similarity=0.365 Sum_probs=131.2
Q ss_pred cCceeecCC-CcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh
Q psy1413 233 CDRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR 310 (408)
Q Consensus 233 ~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~ 310 (408)
+++|...+. .+|+.|..|..+.+++|+...+.+.. .+|+|++|+.++.+.++++|++++..+++.+. .+.++++++.
T Consensus 83 Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~ 161 (329)
T cd08298 83 GDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYT-VDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRALK 161 (329)
T ss_pred CCEEEEeccCCCCCCChhHhCcChhhCCCccccccc-cCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHHH
Confidence 788866543 68899999999999999987766653 47899999999999999999999988877665 6778888887
Q ss_pred ccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413 311 RAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP 390 (408)
Q Consensus 311 ~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
...++++++++|+|+|++|+.++++++.+|++ |+.+++++++.+.++++|++.+++.+. . .++++
T Consensus 162 ~~~~~~~~~vlV~g~g~vg~~~~~la~~~g~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~----~----------~~~~v 226 (329)
T cd08298 162 LAGLKPGQRLGLYGFGASAHLALQIARYQGAE-VFAFTRSGEHQELARELGADWAGDSDD----L----------PPEPL 226 (329)
T ss_pred hhCCCCCCEEEEECCcHHHHHHHHHHHHCCCe-EEEEcCChHHHHHHHHhCCcEEeccCc----c----------CCCcc
Confidence 78899999999998899999999999999986 888888899999999999988887654 1 24579
Q ss_pred ceEEEcccchhhhhh
Q psy1413 391 DKTIDCSGIESTIKL 405 (408)
Q Consensus 391 d~i~d~~g~~~~~~~ 405 (408)
|.++++++.....+.
T Consensus 227 D~vi~~~~~~~~~~~ 241 (329)
T cd08298 227 DAAIIFAPVGALVPA 241 (329)
T ss_pred cEEEEcCCcHHHHHH
Confidence 999998765544443
No 178
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=99.72 E-value=1.8e-16 Score=151.40 Aligned_cols=128 Identities=22% Similarity=0.301 Sum_probs=102.5
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCC-----CCEEEEEec-chhHHHHHHHHHHhC-
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTL-----GSKVLITGA-GPIGLVTLLTARALG- 340 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~-----~~~~lv~G~-G~~G~~~~~~~~~~G- 340 (408)
+|+|++|..++.+.+.++|++++.++++.++ ...++++++ ....+++ +++++|+|+ |++|+.++|+++.+|
T Consensus 96 ~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~ 175 (336)
T cd08252 96 PGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTG 175 (336)
T ss_pred CccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCC
Confidence 4678899999999999999999988877666 455677765 4566666 999999997 999999999999999
Q ss_pred CCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413 341 ASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404 (408)
Q Consensus 341 a~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~ 404 (408)
++ ++.+++++++.+.++++|++.+++.+. +..+.++.. .++++|.+|||+|+...+.
T Consensus 176 ~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~-----~~~~~i~~~-~~~~~d~vl~~~~~~~~~~ 232 (336)
T cd08252 176 LT-VIATASRPESIAWVKELGADHVINHHQ-----DLAEQLEAL-GIEPVDYIFCLTDTDQHWD 232 (336)
T ss_pred cE-EEEEcCChhhHHHHHhcCCcEEEeCCc-----cHHHHHHhh-CCCCCCEEEEccCcHHHHH
Confidence 65 888888889999999999999988653 244445544 3468999999998654443
No 179
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=99.72 E-value=2.5e-16 Score=148.96 Aligned_cols=126 Identities=28% Similarity=0.389 Sum_probs=105.5
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~ 347 (408)
|+|++|..++++.++++|+++++.+++.+. +..++++++ ....++++++++|+|+ |++|+.++++++.+|++ ++++
T Consensus 92 g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~-v~~~ 170 (323)
T cd05276 92 GGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGAR-VIAT 170 (323)
T ss_pred CceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCE-EEEE
Confidence 346677778888899999999887777665 677788876 4467889999999998 99999999999999998 8888
Q ss_pred ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
++++++.+.++++|++.+++... .+..+.+.+.+.++++|.+||++|+..
T Consensus 171 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~g~~~ 220 (323)
T cd05276 171 AGSEEKLEACRALGADVAINYRT----EDFAEEVKEATGGRGVDVILDMVGGDY 220 (323)
T ss_pred cCCHHHHHHHHHcCCCEEEeCCc----hhHHHHHHHHhCCCCeEEEEECCchHH
Confidence 88888898888899988888766 567777777777778999999999765
No 180
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.71 E-value=1.3e-16 Score=152.21 Aligned_cols=228 Identities=29% Similarity=0.431 Sum_probs=171.7
Q ss_pred eeeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEE
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVI 153 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~ 153 (408)
.+.+ +..+.|...+..+.+.+...+++..++.+.- |... ...+....|.++.|++..+|+..+.++.
T Consensus 11 ~~~~-~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~-g~~~--~~~~p~~~g~e~~G~v~~~g~~~~~~~~--------- 77 (330)
T cd08245 11 PLEP-EEVPVPEPGPGEVLIKIEACGVCHTDLHAAE-GDWG--GSKYPLVPGHEIVGEVVEVGAGVEGRKV--------- 77 (330)
T ss_pred CceE-EeccCCCCCCCeEEEEEEEEeccHHHHHHHc-CCCC--CCCCCcccCccceEEEEEECCCCccccc---------
Confidence 3444 4456666666777888888888766554431 1111 1123456789999999998864333333
Q ss_pred EccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 154 VGAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 154 ~G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
+
T Consensus 78 -------------------------------------------------------------------------------G 78 (330)
T cd08245 78 -------------------------------------------------------------------------------G 78 (330)
T ss_pred -------------------------------------------------------------------------------C
Confidence 8
Q ss_pred CceeecCC-CcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413 234 DRVAIEPG-VPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR 311 (408)
Q Consensus 234 ~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~ 311 (408)
++|++.+. .+|+.|.+|..+..+.|.+..+.+.. .+|+|++|+.++++.+.++|+++++++++.+. ...++++++..
T Consensus 79 d~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~ 157 (330)
T cd08245 79 DRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYT-TQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD 157 (330)
T ss_pred CEEEEccccCCCCCChhhhCcCcccCcCccccCcc-cCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh
Confidence 88877554 57999999999999999997665542 46899999999999999999999988887665 56677877766
Q ss_pred cCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413 312 AGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391 (408)
Q Consensus 312 ~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d 391 (408)
..++++++++|+|+|++|++++++++.+|++ |+.+++++++.+.++++|++.+++.+. .+.... . .+++|
T Consensus 158 ~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~----~-~~~~d 227 (330)
T cd08245 158 AGPRPGERVAVLGIGGLGHLAVQYARAMGFE-TVAITRSPDKRELARKLGADEVVDSGA----ELDEQA----A-AGGAD 227 (330)
T ss_pred hCCCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhCCcEEeccCC----cchHHh----c-cCCCC
Confidence 7889999999998788999999999999997 888889999999999999999987654 221111 2 25799
Q ss_pred eEEEcccchhhhh
Q psy1413 392 KTIDCSGIESTIK 404 (408)
Q Consensus 392 ~i~d~~g~~~~~~ 404 (408)
++|||++......
T Consensus 228 ~vi~~~~~~~~~~ 240 (330)
T cd08245 228 VILVTVVSGAAAE 240 (330)
T ss_pred EEEECCCcHHHHH
Confidence 9999988655443
No 181
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=99.71 E-value=2.4e-16 Score=149.81 Aligned_cols=124 Identities=27% Similarity=0.303 Sum_probs=99.0
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh---hccCcCCCC-EEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC---RRAGVTLGS-KVLITGA-GPIGLVTLLTARALGASR 343 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~---~~~~~~~~~-~~lv~G~-G~~G~~~~~~~~~~Ga~~ 343 (408)
+|+|++|..++++.++++|++++.++++.++ ...++++++ .+..+.+++ +++|+|+ |++|+.++|+|+.+|++
T Consensus 94 ~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~- 172 (323)
T TIGR02823 94 DGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYE- 172 (323)
T ss_pred CccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCe-
Confidence 4778999999999999999999998888776 455565554 334478888 9999998 99999999999999998
Q ss_pred EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
++++.+++++.+.++++|++.+++.++ .+. .++..+.+ ++|.++||+|+..
T Consensus 173 vi~~~~~~~~~~~~~~~g~~~~~~~~~----~~~--~~~~~~~~-~~d~vld~~g~~~ 223 (323)
T TIGR02823 173 VVASTGKAEEEDYLKELGASEVIDRED----LSP--PGKPLEKE-RWAGAVDTVGGHT 223 (323)
T ss_pred EEEEeCCHHHHHHHHhcCCcEEEcccc----HHH--HHHHhcCC-CceEEEECccHHH
Confidence 676777778888899999999988654 222 34445443 5999999998653
No 182
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=99.70 E-value=2.7e-16 Score=149.62 Aligned_cols=126 Identities=21% Similarity=0.193 Sum_probs=105.2
Q ss_pred ccceeEEeeccceeeeC----CCCCCcccc-cccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCC
Q psy1413 271 GNLSRYYRHAADFCHKL----PDHVSLEEG-ALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGAS 342 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~----p~~~~~~~a-a~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~ 342 (408)
++|++|..++.+.+.++ |++++++++ +.++ +..|+|+++ +...+++++++||+|+ |++|++++|+++.+|++
T Consensus 86 ~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~ 165 (325)
T TIGR02825 86 PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCK 165 (325)
T ss_pred cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCE
Confidence 36889999998887777 888998876 4454 678899887 6678899999999998 99999999999999997
Q ss_pred eEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 343 RVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 343 ~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
++++++++++.+.++++|++.++++++. ++..+.+++.+ ++++|++||++|+..
T Consensus 166 -Vi~~~~s~~~~~~~~~lGa~~vi~~~~~---~~~~~~~~~~~-~~gvdvv~d~~G~~~ 219 (325)
T TIGR02825 166 -VVGAAGSDEKVAYLKKLGFDVAFNYKTV---KSLEETLKKAS-PDGYDCYFDNVGGEF 219 (325)
T ss_pred -EEEEeCCHHHHHHHHHcCCCEEEecccc---ccHHHHHHHhC-CCCeEEEEECCCHHH
Confidence 8888899999999999999999998752 24556666665 468999999999764
No 183
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.70 E-value=4.1e-16 Score=148.51 Aligned_cols=125 Identities=22% Similarity=0.170 Sum_probs=106.5
Q ss_pred ccceeEEeeccc---eeeeCCCCCC--c----ccccccchhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHh
Q psy1413 271 GNLSRYYRHAAD---FCHKLPDHVS--L----EEGALLEPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARAL 339 (408)
Q Consensus 271 g~~~~~~~~~~~---~~~~~p~~~~--~----~~aa~~~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~ 339 (408)
++|++|..++++ .++++|++++ . ..++...+..|+|+++ ....+++++++||+|+ |++|++++|+|+.+
T Consensus 88 ~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~ 167 (329)
T cd08294 88 FGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIK 167 (329)
T ss_pred CCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHc
Confidence 468899999999 9999999987 2 2232334778899987 5678899999999998 99999999999999
Q ss_pred CCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 340 GASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 340 Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
|++ |+++++++++.+.++++|+++++++++ +++.+.+++.++ +++|++||++|+..
T Consensus 168 G~~-vi~~~~s~~~~~~l~~~Ga~~vi~~~~----~~~~~~v~~~~~-~gvd~vld~~g~~~ 223 (329)
T cd08294 168 GCK-VIGCAGSDDKVAWLKELGFDAVFNYKT----VSLEEALKEAAP-DGIDCYFDNVGGEF 223 (329)
T ss_pred CCE-EEEEeCCHHHHHHHHHcCCCEEEeCCC----ccHHHHHHHHCC-CCcEEEEECCCHHH
Confidence 997 888889999999999999999999877 667777877775 68999999999743
No 184
>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.70 E-value=3.4e-16 Score=150.49 Aligned_cols=152 Identities=26% Similarity=0.309 Sum_probs=116.6
Q ss_pred cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc
Q psy1413 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR 311 (408)
Q Consensus 233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~ 311 (408)
+|+|+..+..+|+.|..|. ....++. ..+|+|++|..++++.++++|++++.++++.++ ...++++++..
T Consensus 102 Gd~V~~~~~~~~~~~~~~~--------~~~~~~~-~~~g~~~~~~~v~~~~~~~ip~~~~~~~~a~l~~~~~ta~~~~~~ 172 (350)
T cd08274 102 GERVLVDPSIRDPPEDDPA--------DIDYIGS-ERDGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAENMLER 172 (350)
T ss_pred CCEEEEecCcCCCCccccc--------cccccCC-CCCccceEEEEecHHHceeCCCCCCHHHHHhcccHHHHHHHHHhh
Confidence 7888776655666554432 1222332 246999999999999999999999988877666 67778888877
Q ss_pred cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413 312 AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP 390 (408)
Q Consensus 312 ~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
..++++++++|+|+ |++|+.++|+++.+|++ ++.+++++ +.+.++++|++.+++..+ ....+ ...+.++++
T Consensus 173 ~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-vi~~~~~~-~~~~~~~~g~~~~~~~~~----~~~~~--~~~~~~~~~ 244 (350)
T cd08274 173 AGVGAGETVLVTGASGGVGSALVQLAKRRGAI-VIAVAGAA-KEEAVRALGADTVILRDA----PLLAD--AKALGGEPV 244 (350)
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCch-hhHHHHhcCCeEEEeCCC----ccHHH--HHhhCCCCC
Confidence 78899999999999 99999999999999998 67676655 788889999986665443 33333 455667899
Q ss_pred ceEEEcccchh
Q psy1413 391 DKTIDCSGIES 401 (408)
Q Consensus 391 d~i~d~~g~~~ 401 (408)
|++|||+|+..
T Consensus 245 d~vi~~~g~~~ 255 (350)
T cd08274 245 DVVADVVGGPL 255 (350)
T ss_pred cEEEecCCHHH
Confidence 99999999753
No 185
>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins. Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an
Probab=99.70 E-value=6.7e-17 Score=154.12 Aligned_cols=217 Identities=24% Similarity=0.302 Sum_probs=151.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc----------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------------------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------------------- 58 (408)
+.++++|++|++.+. +... ...+|.++|||++|+|+++|++++++++||+|++.+
T Consensus 31 v~~~~i~~~d~~~~~-g~~~--~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (330)
T cd08245 31 IEACGVCHTDLHAAE-GDWG--GSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKA 107 (330)
T ss_pred EEEEeccHHHHHHHc-CCCC--CCCCCcccCccceEEEEEECCCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCc
Confidence 468999999999884 3222 235688999999999999999999999999998532
Q ss_pred ------------CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413 59 ------------EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG 125 (408)
Q Consensus 59 ------------~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G 125 (408)
++...+...++..|+++++.+.+.++....+++.+... ..+ .+++++|+|+|.+|++++++++.+|
T Consensus 108 ~~~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G 186 (330)
T cd08245 108 VNTGYTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSALRD-AGPRPGERVAVLGIGGLGHLAVQYARAMG 186 (330)
T ss_pred cccCcccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHHHHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCC
Confidence 11122233444556665554444344443333321111 222 4678999998889999888887766
Q ss_pred Cc-------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCC-cccC
Q psy1413 126 HE-------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQD-VKIP 164 (408)
Q Consensus 126 ~~-------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~-~~~~ 164 (408)
.+ ++.++++++.. .+.+++++++|+++.+|..... ..++
T Consensus 187 ~~v~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~ 266 (330)
T cd08245 187 FETVAITRSPDKRELARKLGADEVVDSGAELDEQAAAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPD 266 (330)
T ss_pred CEEEEEeCCHHHHHHHHHhCCcEEeccCCcchHHhccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCCccccc
Confidence 52 23344443322 2678999999999999975433 2333
Q ss_pred HHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 165 LVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 165 ~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
...++.++.++.+..... ..++++++++.++.+++ ..+.|++++++++|+.+.+++.
T Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~---~~~~~~~~~~~~a~~~~~~~~~ 324 (330)
T cd08245 267 IFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKP---MIETFPLDQANEAYERMEKGDV 324 (330)
T ss_pred hHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcc---eEEEEcHHHHHHHHHHHHcCCC
Confidence 456788999998887765 77899999999999874 4578999999999999987643
No 186
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.70 E-value=4.5e-17 Score=154.80 Aligned_cols=224 Identities=16% Similarity=0.194 Sum_probs=151.9
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI 68 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~ 68 (408)
|.++|+|++|++.+. |..+ ....+|.++|||++|+|+++ +++.+++||||+... ++...+.+.+
T Consensus 34 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~v~~~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~ 109 (325)
T cd05280 34 VHYSSLNYKDALAAT-GNGG-VTRNYPHTPGIDAAGTVVSS--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWV 109 (325)
T ss_pred EEEeecChHHHHHhc-CCCC-CCCCCCCccCcccEEEEEEe--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhE
Confidence 468999999999884 4322 22346889999999999999 567899999998742 3345666677
Q ss_pred eeccceeeecccccCCCCCCcceEEE--Eeeeee--cCCeEEEEcc-CccccccccccccccCc----------------
Q psy1413 69 LRRRFSLRFREQKPIEDPDDHEVLLE--MHCVGI--CGSDVHYLTH-GQIGDFRLSDPMIVGHE---------------- 127 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~~~~~~~~--~~~~~~--~g~~vlv~g~-G~vG~~~i~~a~~~G~~---------------- 127 (408)
+..|+++++.+.+.++..+.+++... +....+ .+++++|+|+ |.+|++++++++.+|+.
T Consensus 110 ~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 189 (325)
T cd05280 110 VPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLKS 189 (325)
T ss_pred EECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHh
Confidence 88888888755555554443433211 111122 2468999985 99999999998887763
Q ss_pred ------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeec
Q psy1413 128 ------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFR 180 (408)
Q Consensus 128 ------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~ 180 (408)
++.++++++... +.+++++++|+++.+|.... +..++...++.+++++.+...
T Consensus 190 ~g~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (325)
T cd05280 190 LGASEVLDREDLLDESKKPLLKARWAGAIDTVGGDVLANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDS 269 (325)
T ss_pred cCCcEEEcchhHHHHHHHHhcCCCccEEEECCchHHHHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEe
Confidence 123333333221 57899999999999997643 345566666689999998764
Q ss_pred CC---CcH----HHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 181 YA---NDY----PIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 181 ~~---~~~----~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
.. +.. +.+++++..+ ..+.+.++|+++|++++++.+.+++ ..+|++++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~a~~~~~~~~-~~gk~vv~ 324 (325)
T cd05280 270 VNCPMELRKQVWQKLATEWKPD---LLEIVVREISLEELPEAIDRLLAGK-HRGRTVVK 324 (325)
T ss_pred ecCchhHHHHHHHHHHHHHhcC---CccceeeEecHHHHHHHHHHHhcCC-cceEEEEe
Confidence 32 233 3344444444 2334889999999999999998765 44566653
No 187
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=99.70 E-value=4.7e-17 Score=155.05 Aligned_cols=220 Identities=13% Similarity=0.094 Sum_probs=152.4
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---CcccccCC---cceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---EFRNVCLS---PILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---~~~~~~~~---~~~~~p~~ 74 (408)
|+++|||+.|.+.. . ...++|.++|+|++|+|++ .++.|++||||+... ++...... .++..|+.
T Consensus 40 v~a~~in~~~~~~~-~-----~~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~iP~~ 110 (329)
T cd08294 40 ALFLSVDPYMRPYS-K-----RLNEGDTMIGTQVAKVIES---KNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLPAD 110 (329)
T ss_pred EEEEecCHHHhccc-c-----cCCCCCcEecceEEEEEec---CCCCCCCCCEEEeeCCeeeEEEECCccccceEECCcc
Confidence 46899998875522 1 1124688999999999985 557899999998643 34456666 78888888
Q ss_pred eee--cc---cccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc--------------------
Q psy1413 75 LRF--RE---QKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------- 127 (408)
Q Consensus 75 ~~~--~~---~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------- 127 (408)
+++ ++ .+.++.++.+++.+......+ .+++++|+| +|++|++++|+++.+|+.
T Consensus 111 ~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~~~Ga~ 190 (329)
T cd08294 111 LPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLKELGFD 190 (329)
T ss_pred ccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence 872 11 123455555554332111222 478899998 799999999999887762
Q ss_pred ---------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC---C----cccCHHHHHhcCcEEEE
Q psy1413 128 ---------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ---D----VKIPLVLTMTKEIDIRG 177 (408)
Q Consensus 128 ---------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~---~----~~~~~~~~~~~~~~l~g 177 (408)
++.+++++|... +++++++++|+++.+|.... + .......++++++++.+
T Consensus 191 ~vi~~~~~~~~~~v~~~~~~gvd~vld~~g~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 270 (329)
T cd08294 191 AVFNYKTVSLEEALKEAAPDGIDCYFDNVGGEFSSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEG 270 (329)
T ss_pred EEEeCCCccHHHHHHHHCCCCcEEEEECCCHHHHHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEE
Confidence 344455555422 57899999999999985321 1 12334567889999998
Q ss_pred eecCC------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 178 VFRYA------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 178 ~~~~~------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
.+..+ +.+++++++++++++++.+ ..+|+++|+.+|++.+.+++. .+|++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~--~~~~~l~~~~~A~~~~~~~~~-~gkvvv~ 328 (329)
T cd08294 271 FIVYRWQDRWPEALKQLLKWIKEGKLKYRE--HVTEGFENMPQAFIGMLKGEN-TGKAIVK 328 (329)
T ss_pred EEhhhhHHHHHHHHHHHHHHHHCCCCcCCc--ccccCHHHHHHHHHHHHcCCC-CCeEEEe
Confidence 76432 2367889999999998653 456899999999999998764 4666654
No 188
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=99.70 E-value=2.5e-16 Score=150.70 Aligned_cols=125 Identities=18% Similarity=0.188 Sum_probs=105.6
Q ss_pred ccceeEEeecc-ceeeeCC-CCCCcc-cccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeE
Q psy1413 271 GNLSRYYRHAA-DFCHKLP-DHVSLE-EGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRV 344 (408)
Q Consensus 271 g~~~~~~~~~~-~~~~~~p-~~~~~~-~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~v 344 (408)
|+|++|..+++ ..++++| ++++.+ +++.++ ++.|+|+++ ....+++++++||+|+ |++|++++|+|+.+|++ |
T Consensus 101 g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~-V 179 (338)
T cd08295 101 TGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCY-V 179 (338)
T ss_pred CCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE-E
Confidence 68999999999 7899995 567765 566555 678889888 5578999999999999 99999999999999997 8
Q ss_pred EEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 345 VITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 345 v~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+++++++++.+.+++ +|++.++++++. ++..+.+++.++ +++|++||++|+.
T Consensus 180 i~~~~~~~~~~~~~~~lGa~~vi~~~~~---~~~~~~i~~~~~-~gvd~v~d~~g~~ 232 (338)
T cd08295 180 VGSAGSDEKVDLLKNKLGFDDAFNYKEE---PDLDAALKRYFP-NGIDIYFDNVGGK 232 (338)
T ss_pred EEEeCCHHHHHHHHHhcCCceeEEcCCc---ccHHHHHHHhCC-CCcEEEEECCCHH
Confidence 888899999999988 999999997541 366677777774 7899999999974
No 189
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=99.69 E-value=8e-17 Score=153.83 Aligned_cols=227 Identities=22% Similarity=0.270 Sum_probs=150.1
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCccccc----------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVC---------------- 64 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~---------------- 64 (408)
+.++|+|++|++.+. |... ....+|.++|||++|+|+++|++++.+++||+|++.+...+..
T Consensus 34 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (342)
T cd08266 34 VKAAALNHLDLWVRR-GMPG-IKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYG 111 (342)
T ss_pred EEeeecCHHHHHHhc-CCCC-CCCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccccccccchhhcccccccccccc
Confidence 357899999999884 4321 2245688999999999999999999999999999765322211
Q ss_pred -----------------CCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-Ccccccccccccccc
Q psy1413 65 -----------------LSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVG 125 (408)
Q Consensus 65 -----------------~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G 125 (408)
...++..|+.+.+.+.+.++....+++........+ .+++++|+|+ +.+|++++++++..|
T Consensus 112 ~~g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g 191 (342)
T cd08266 112 ILGEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFG 191 (342)
T ss_pred ccccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcC
Confidence 112223333333322222222222221111111112 4678888885 478888877776665
Q ss_pred Cc------------------------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-C
Q psy1413 126 HE------------------------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-D 160 (408)
Q Consensus 126 ~~------------------------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~ 160 (408)
+. .+.++++.|... ..+++++++|+++.+|.... .
T Consensus 192 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~~ 271 (342)
T cd08266 192 ATVIATAGSEDKLERAKELGADYVIDYRKEDFVREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGYE 271 (342)
T ss_pred CEEEEEeCCHHHHHHHHHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCCC
Confidence 53 233333333221 56789999999999996543 3
Q ss_pred cccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 161 VKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 161 ~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
..++....+.+++++.+..... ..+.+++++++++.+++ ++++.|++++++++++.+.+++ ...|++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~-~~~kvv~~ 341 (342)
T cd08266 272 APIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKP--VIDSVFPLEEAAEAHRRLESRE-QFGKIVLT 341 (342)
T ss_pred CCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCccc--ceeeeEcHHHHHHHHHHHHhCC-CCceEEEe
Confidence 4555556678899998887665 67899999999998753 5889999999999999998754 34566654
No 190
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.69 E-value=1e-15 Score=145.21 Aligned_cols=125 Identities=30% Similarity=0.358 Sum_probs=105.6
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI 346 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~ 346 (408)
.|+|++|..++.+.++++|++++...++.++ ...++++++ +...++++++++|+|+ |++|+.++++++.+|++ ++.
T Consensus 96 ~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~ 174 (326)
T cd08272 96 QGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGAR-VYA 174 (326)
T ss_pred CCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCE-EEE
Confidence 4678889999999999999999987777666 566677776 5678899999999997 99999999999999998 777
Q ss_pred EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
++++ ++.+.++++|++.+++... . ..+.+.+.+.++++|.++||+|+..
T Consensus 175 ~~~~-~~~~~~~~~g~~~~~~~~~----~-~~~~~~~~~~~~~~d~v~~~~~~~~ 223 (326)
T cd08272 175 TASS-EKAAFARSLGADPIIYYRE----T-VVEYVAEHTGGRGFDVVFDTVGGET 223 (326)
T ss_pred Eech-HHHHHHHHcCCCEEEecch----h-HHHHHHHhcCCCCCcEEEECCChHH
Confidence 7777 8888888899988888765 5 6777888887789999999998754
No 191
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.69 E-value=9.5e-16 Score=145.45 Aligned_cols=126 Identities=29% Similarity=0.382 Sum_probs=105.7
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~ 347 (408)
|.|++|+.++.+.++++|++++.++++.++ ...++++++ ....+.++++++|+|+ |++|+.++++++..|++ ++.+
T Consensus 97 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~-v~~~ 175 (328)
T cd08268 97 GTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGAT-VIAT 175 (328)
T ss_pred ccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE-EEEE
Confidence 567788888889999999999987776665 677788876 4567788999999998 99999999999999997 8888
Q ss_pred ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
+++.++.+.++++|++.+++.+. .+..+.+.+.+.++++|.+++++|+..
T Consensus 176 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~~~~~ 225 (328)
T cd08268 176 TRTSEKRDALLALGAAHVIVTDE----EDLVAEVLRITGGKGVDVVFDPVGGPQ 225 (328)
T ss_pred cCCHHHHHHHHHcCCCEEEecCC----ccHHHHHHHHhCCCCceEEEECCchHh
Confidence 88888888888899988888765 566677777777778999999998743
No 192
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.69 E-value=9.9e-17 Score=153.05 Aligned_cols=226 Identities=20% Similarity=0.241 Sum_probs=152.6
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
+.++|+|++|++.. .+.++ ...+.|.++|||++|+|+++|+++.++++||+|.....
T Consensus 34 v~~~~i~~~d~~~~-~g~~~-~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 111 (336)
T cd08276 34 VHAVSLNYRDLLIL-NGRYP-PPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPI 111 (336)
T ss_pred EEEEecCHHHHHHh-cCCCC-CCCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEeccccccccccccccccccccccc
Confidence 35899999999987 34322 22346889999999999999999999999999987541
Q ss_pred ------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccccCcc----
Q psy1413 60 ------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIVGHEA---- 128 (408)
Q Consensus 60 ------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~G~~~---- 128 (408)
+.......++..|+++++.+.+.++....+++........ ..++.++|.|.|++|++++++++..|+..
T Consensus 112 ~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~ 191 (336)
T cd08276 112 DGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATS 191 (336)
T ss_pred CceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhcCCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEe
Confidence 1122223344445554443333333332222211111111 14678888888899998888888777632
Q ss_pred ---------------------------------------eeEEEccCch--HHHHhhccCCcEEEEEccCCCC-cccCHH
Q psy1413 129 ---------------------------------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQD-VKIPLV 166 (408)
Q Consensus 129 ---------------------------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~~-~~~~~~ 166 (408)
+.++++++.. ..++++++++|+++.+|..... ...+..
T Consensus 192 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 271 (336)
T cd08276 192 SSDEKLERAKALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGFEAPVLLL 271 (336)
T ss_pred CCHHHHHHHHHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCCccCcCHH
Confidence 1222222211 1568899999999999976543 345666
Q ss_pred HHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 167 LTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 167 ~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
.++.+++++.+..... ..+++++++++++.+.+ .+++.|++++++++|+.+.+++. ..|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~~kvv~ 334 (336)
T cd08276 272 PLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRP--VIDRVFPFEEAKEAYRYLESGSH-FGKVVI 334 (336)
T ss_pred HHhhcceEEEEEecCcHHHHHHHHHHHHcCCccc--ccCcEEeHHHHHHHHHHHHhCCC-CceEEE
Confidence 7789999999987655 67899999999887754 36789999999999999887643 445554
No 193
>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i
Probab=99.69 E-value=6.5e-16 Score=145.95 Aligned_cols=129 Identities=33% Similarity=0.443 Sum_probs=107.7
Q ss_pred CccceeEEeeccceeeeCCCCCCccccccc-chhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEe
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALL-EPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~-~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
.|+|++|..++++.++++|+++ . .++.. .++.++++++....++++++++|+|+|++|++++|+|+.+|++++++++
T Consensus 84 ~g~~~~~~~v~~~~~~~lP~~~-~-~~~~~~~~~~~a~~~~~~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~ 161 (312)
T cd08269 84 GGAFAEYDLADADHAVPLPSLL-D-GQAFPGEPLGCALNVFRRGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAID 161 (312)
T ss_pred CCcceeeEEEchhheEECCCch-h-hhHHhhhhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEC
Confidence 5889999999999999999998 2 33333 4666778777777889999999997799999999999999998788888
Q ss_pred cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413 349 ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404 (408)
Q Consensus 349 ~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~ 404 (408)
+++++.+.++++|++.+++.+. .++.+.+.+++.++++|++|||+|+....+
T Consensus 162 ~~~~~~~~~~~~g~~~~~~~~~----~~~~~~l~~~~~~~~vd~vld~~g~~~~~~ 213 (312)
T cd08269 162 RRPARLALARELGATEVVTDDS----EAIVERVRELTGGAGADVVIEAVGHQWPLD 213 (312)
T ss_pred CCHHHHHHHHHhCCceEecCCC----cCHHHHHHHHcCCCCCCEEEECCCCHHHHH
Confidence 8888888889999999988665 567777888887789999999998654433
No 194
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.68 E-value=7.5e-16 Score=145.83 Aligned_cols=120 Identities=31% Similarity=0.380 Sum_probs=96.9
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc-cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR-AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~-~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~ 347 (408)
|+|++|...+++.+.++|++++.++++.+. ...++++++.. ..++++++++|+|+ |++|+.++++++.+|++ ++.+
T Consensus 96 g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~-v~~~ 174 (319)
T cd08267 96 GALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAH-VTGV 174 (319)
T ss_pred ceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCE-EEEE
Confidence 457778888888999999999987777665 67778888754 44889999999998 99999999999999996 7777
Q ss_pred ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccc
Q psy1413 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGI 399 (408)
Q Consensus 348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~ 399 (408)
+++ ++.+.++++|++.+++.+. .+.. +..+.++++|.++||+|+
T Consensus 175 ~~~-~~~~~~~~~g~~~~~~~~~----~~~~---~~~~~~~~~d~vi~~~~~ 218 (319)
T cd08267 175 CST-RNAELVRSLGADEVIDYTT----EDFV---ALTAGGEKYDVIFDAVGN 218 (319)
T ss_pred eCH-HHHHHHHHcCCCEeecCCC----CCcc---hhccCCCCCcEEEECCCc
Confidence 655 7788889999988887655 2222 445566789999999984
No 195
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=99.66 E-value=3.4e-15 Score=141.49 Aligned_cols=123 Identities=26% Similarity=0.333 Sum_probs=100.8
Q ss_pred ceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec
Q psy1413 273 LSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDI 349 (408)
Q Consensus 273 ~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~ 349 (408)
|++|..++.+.++++|++++..+++.++ ...++++++ ....++++++++|+|+ |++|+.++++++.+|++ ++++.+
T Consensus 94 ~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~-v~~~~~ 172 (325)
T TIGR02824 94 YAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGAR-VFTTAG 172 (325)
T ss_pred ceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCE-EEEEeC
Confidence 4566666777888899999877766555 666777775 5678899999999998 99999999999999997 888888
Q ss_pred ChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 350 LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 350 ~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
++++.+.++++|++.+++... .+..+.+++.+.++++|.++||+|+.
T Consensus 173 ~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~~i~~~~~~ 219 (325)
T TIGR02824 173 SDEKCAACEALGADIAINYRE----EDFVEVVKAETGGKGVDVILDIVGGS 219 (325)
T ss_pred CHHHHHHHHHcCCcEEEecCc----hhHHHHHHHHcCCCCeEEEEECCchH
Confidence 888888888899988887765 56667777777667899999999864
No 196
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.66 E-value=3.7e-15 Score=141.41 Aligned_cols=126 Identities=28% Similarity=0.418 Sum_probs=103.5
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~ 347 (408)
|+|++|..++.+.++++|++++..+++.+. ...++++++ ....++++++++|+|+ |++|+.++++++..|++ ++.+
T Consensus 94 ~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~-v~~~ 172 (325)
T cd08271 94 GSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLR-VITT 172 (325)
T ss_pred ccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-EEEE
Confidence 457788888888999999999988777665 677778777 4467889999999999 89999999999999998 6655
Q ss_pred ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~ 402 (408)
. ++++.+.+.++|++.+++.+. .+..+.+++.+.++++|.+++|+|+...
T Consensus 173 ~-~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~~~~~~d~vi~~~~~~~~ 222 (325)
T cd08271 173 C-SKRNFEYVKSLGADHVIDYND----EDVCERIKEITGGRGVDAVLDTVGGETA 222 (325)
T ss_pred E-cHHHHHHHHHcCCcEEecCCC----ccHHHHHHHHcCCCCCcEEEECCCcHhH
Confidence 5 667778888899999988765 5566777777777889999999987653
No 197
>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family. This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous
Probab=99.65 E-value=2.8e-16 Score=148.25 Aligned_cols=191 Identities=26% Similarity=0.365 Sum_probs=133.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccC---------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPE--------------------- 59 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--------------------- 59 (408)
|.++++|++|++... +.. .+..+|.++|+|++|+|+++|++++.+++||+|...+.
T Consensus 33 v~~~~l~~~d~~~~~-g~~--~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 109 (306)
T cd08258 33 VAAAGICGSDLHIYK-GDY--DPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHR 109 (306)
T ss_pred EEEEEechhhHHHHc-CCC--CcCCCCeeeccceEEEEEEECCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCC
Confidence 458999999998874 322 12345789999999999999999999999999987541
Q ss_pred -------------cccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCcccccccccccccc
Q psy1413 60 -------------FRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRLSDPMIVG 125 (408)
Q Consensus 60 -------------~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i~~a~~~G 125 (408)
+.......++..|+++++. .+.++.+..+++........+ .+++++|.|+|.+|++++++++.+|
T Consensus 110 ~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~-~aa~~~~~~~a~~~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G 188 (306)
T cd08258 110 KGIGTQADGGFAEYVLVPEESLHELPENLSLE-AAALTEPLAVAVHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQG 188 (306)
T ss_pred ceeeecCCCceEEEEEcchHHeEECcCCCCHH-HHHhhchHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcC
Confidence 1233334556666666663 333333333332211111112 4678888888889988888877766
Q ss_pred Cc-------------------------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCC-
Q psy1413 126 HE-------------------------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGS- 158 (408)
Q Consensus 126 ~~-------------------------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~- 158 (408)
+. ++.+++++|.. .+.+++++++|+++.+|...
T Consensus 189 ~~v~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~ 268 (306)
T cd08258 189 ATVVVVGTEKDEVRLDVAKELGADAVNGGEEDLAELVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGP 268 (306)
T ss_pred CEEEEECCCCCHHHHHHHHHhCCcccCCCcCCHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCC
Confidence 53 22333343321 15688999999999999865
Q ss_pred CCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcC
Q psy1413 159 QDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASG 195 (408)
Q Consensus 159 ~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g 195 (408)
....+++..+++|++++.|++.++ ++++++++++++|
T Consensus 269 ~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~ 306 (306)
T cd08258 269 LAASIDVERIIQKELSVIGSRSSTPASWETALRLLASG 306 (306)
T ss_pred CCcccCHHHHhhcCcEEEEEecCchHhHHHHHHHHhcC
Confidence 356778888889999999999886 8899999999875
No 198
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=99.65 E-value=5e-15 Score=140.12 Aligned_cols=123 Identities=32% Similarity=0.415 Sum_probs=100.8
Q ss_pred ceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhh-ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec
Q psy1413 273 LSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACR-RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDI 349 (408)
Q Consensus 273 ~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~-~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~ 349 (408)
+++|..++.+.++++|++++..+++... +..++++++. ...++++++++|+|+ |++|+.++++++..|++ ++.+++
T Consensus 94 ~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~~~ 172 (323)
T cd08241 94 FAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGAR-VIAAAS 172 (323)
T ss_pred eEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCE-EEEEeC
Confidence 4456666667788889888876666444 6677777763 577889999999999 99999999999999998 888888
Q ss_pred ChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 350 LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 350 ~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+.++.+.++++|++.+++... .+..+.+.+.+.++++|.++||+|+.
T Consensus 173 ~~~~~~~~~~~g~~~~~~~~~----~~~~~~i~~~~~~~~~d~v~~~~g~~ 219 (323)
T cd08241 173 SEEKLALARALGADHVIDYRD----PDLRERVKALTGGRGVDVVYDPVGGD 219 (323)
T ss_pred CHHHHHHHHHcCCceeeecCC----ccHHHHHHHHcCCCCcEEEEECccHH
Confidence 888899998899988888765 56777788888778899999999874
No 199
>PLN03154 putative allyl alcohol dehydrogenase; Provisional
Probab=99.64 E-value=2.9e-15 Score=143.80 Aligned_cols=125 Identities=19% Similarity=0.206 Sum_probs=103.2
Q ss_pred ccceeEEeeccce--eee--CCCCCCcc-cccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCC
Q psy1413 271 GNLSRYYRHAADF--CHK--LPDHVSLE-EGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGAS 342 (408)
Q Consensus 271 g~~~~~~~~~~~~--~~~--~p~~~~~~-~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~ 342 (408)
|+|++|..++.+. +.+ +|++++++ +++.++ ...|+|+++ ....+++++++||+|+ |++|++++|+|+.+|++
T Consensus 106 ~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~ 185 (348)
T PLN03154 106 TGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCY 185 (348)
T ss_pred CCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCE
Confidence 6799999998753 544 48999875 565555 677888887 4577899999999999 99999999999999997
Q ss_pred eEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 343 RVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 343 ~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
|+++++++++.+.++ ++|++.++++++. +++.+.+++++. +++|++|||+|+.
T Consensus 186 -Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~---~~~~~~i~~~~~-~gvD~v~d~vG~~ 239 (348)
T PLN03154 186 -VVGSAGSSQKVDLLKNKLGFDEAFNYKEE---PDLDAALKRYFP-EGIDIYFDNVGGD 239 (348)
T ss_pred -EEEEcCCHHHHHHHHHhcCCCEEEECCCc---ccHHHHHHHHCC-CCcEEEEECCCHH
Confidence 888888999999887 7999999998641 356777777774 5899999999975
No 200
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.64 E-value=3.9e-16 Score=148.75 Aligned_cols=225 Identities=20% Similarity=0.247 Sum_probs=151.9
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~ 74 (408)
|.++|+|++|+..+ .+.... ...+|.++|||++|+|+++|++++.|++||+|.... ++.......++..|++
T Consensus 34 v~~~~i~~~d~~~~-~g~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~ 111 (331)
T cd08273 34 VEASGVSFADVQMR-RGLYPD-QPPLPFTPGYDLVGRVDALGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPVPEG 111 (331)
T ss_pred EEEEecCHHHHHHh-CCCCCC-CCCCCcccccceEEEEEEeCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEECCCC
Confidence 45899999999987 443221 235788999999999999999999999999998754 2345555677888888
Q ss_pred eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCcce-----------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHEAS----------------------- 129 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~~~----------------------- 129 (408)
+++++.+.++.+..+++........+ .+++++|+| .|.+|++++++++.+|....
T Consensus 112 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~~~~ 191 (331)
T cd08273 112 VDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTASERNHAALRELGATPIDYRT 191 (331)
T ss_pred CCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCeEEcCCC
Confidence 88855556666655554322111222 478899988 58999999888887765422
Q ss_pred --------------eEEEccCchH--HHHhhccCCcEEEEEccCCCCc--ccCH--H----------HH--HhcCcEEEE
Q psy1413 130 --------------GIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDV--KIPL--V----------LT--MTKEIDIRG 177 (408)
Q Consensus 130 --------------~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~--~~~~--~----------~~--~~~~~~l~g 177 (408)
.+++++++.. .++++++++|+++.+|...... .+++ . .. ..++..+.+
T Consensus 192 ~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (331)
T cd08273 192 KDWLPAMLTPGGVDVVFDGVGGESYEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYY 271 (331)
T ss_pred cchhhhhccCCCceEEEECCchHHHHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEe
Confidence 2223332221 4678999999999999764322 1211 0 11 222333333
Q ss_pred eecC--------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413 178 VFRY--------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM 230 (408)
Q Consensus 178 ~~~~--------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv 230 (408)
.... .+.+++++++++++.+++ +++++|++++++++|+.+.+++. .+|++
T Consensus 272 ~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~~-~gkvv 329 (331)
T cd08273 272 VWRDRAEDPKLFRQDLTELLDLLAKGKIRP--KIAKRLPLSEVAEAHRLLESGKV-VGKIV 329 (331)
T ss_pred echhcccCHHHHHHHHHHHHHHHHCCCccC--CcceEEcHHHHHHHHHHHHcCCC-cceEE
Confidence 3221 145788999999998863 57889999999999999987654 34444
No 201
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=99.64 E-value=3.5e-15 Score=140.32 Aligned_cols=120 Identities=28% Similarity=0.334 Sum_probs=95.2
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc-cCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR-AGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~-~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~ 347 (408)
|+|++|..++.+.++++|++++...++.++ ...++++++.. ..+.++++++|+|+ |++|++++++++..|++ ++.+
T Consensus 97 g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~-v~~~ 175 (309)
T cd05289 97 GAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGAR-VIAT 175 (309)
T ss_pred CcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCE-EEEE
Confidence 567788888888899999999887777665 55667777744 44889999999998 99999999999999998 6667
Q ss_pred ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
++++ +.+.++++|++.+++.+. .+..+ .+.++++|.+|||+|+.
T Consensus 176 ~~~~-~~~~~~~~g~~~~~~~~~----~~~~~----~~~~~~~d~v~~~~~~~ 219 (309)
T cd05289 176 ASAA-NADFLRSLGADEVIDYTK----GDFER----AAAPGGVDAVLDTVGGE 219 (309)
T ss_pred ecch-hHHHHHHcCCCEEEeCCC----Cchhh----ccCCCCceEEEECCchH
Confidence 6666 788888899988888765 22222 34456899999999876
No 202
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=99.64 E-value=7.7e-15 Score=139.46 Aligned_cols=123 Identities=24% Similarity=0.260 Sum_probs=97.3
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh---hccCcC-CCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC---RRAGVT-LGSKVLITGA-GPIGLVTLLTARALGASR 343 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~---~~~~~~-~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~ 343 (408)
.|+|++|..++++.++++|++++.++++.++ ...++++++ ...... ++++++|+|+ |++|+.++|+++.+|++
T Consensus 95 ~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~- 173 (324)
T cd08288 95 WGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYE- 173 (324)
T ss_pred CCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCe-
Confidence 4779999999999999999999988887776 444455443 233444 5789999999 99999999999999997
Q ss_pred EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
++.+++++++.+.++++|++.++++++ ....++.++. +++|.+||++|+.
T Consensus 174 vi~~~~~~~~~~~~~~~g~~~~~~~~~------~~~~~~~~~~-~~~~~~~d~~~~~ 223 (324)
T cd08288 174 VVASTGRPEEADYLRSLGASEIIDRAE------LSEPGRPLQK-ERWAGAVDTVGGH 223 (324)
T ss_pred EEEEeCCHHHHHHHHhcCCCEEEEcch------hhHhhhhhcc-CcccEEEECCcHH
Confidence 788888899999999999999998754 1224445543 3589999999973
No 203
>KOG0025|consensus
Probab=99.64 E-value=4.2e-15 Score=131.15 Aligned_cols=208 Identities=21% Similarity=0.244 Sum_probs=150.5
Q ss_pred eeecccccCCCCCCcceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEE
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIV 154 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~ 154 (408)
+++ ....+|......+++...+..++..++--+- |- --....++..-|.|..+.+.++|+....++.
T Consensus 35 lql-~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQ-Gv-YpvrP~~PAVgGnEGv~eVv~vGs~vkgfk~---------- 101 (354)
T KOG0025|consen 35 LQL-KNLELPAVPGSDVLVKMLAAPINPSDINQIQ-GV-YPVRPELPAVGGNEGVGEVVAVGSNVKGFKP---------- 101 (354)
T ss_pred hee-ecccCCCCCCCceeeeeeecCCChHHhhhhc-cc-cCCCCCCCcccCCcceEEEEEecCCcCccCC----------
Confidence 344 4556666666668888888888877764332 11 1122344556688999999999986555554
Q ss_pred ccCCCCcccCHHHHHhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 155 GAGSQDVKIPLVLTMTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
+|
T Consensus 102 ------------------------------------------------------------------------------Gd 103 (354)
T KOG0025|consen 102 ------------------------------------------------------------------------------GD 103 (354)
T ss_pred ------------------------------------------------------------------------------CC
Confidence 88
Q ss_pred ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccchh-hhhhhhh-hcc
Q psy1413 235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLEPL-SVGVHAC-RRA 312 (408)
Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~-~~~~~~~-~~~ 312 (408)
+|.+.+ ...|+|++|.+++++.++++++.++++.||++..- .|+|..+ ...
T Consensus 104 ~VIp~~---------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT~~VNP~TAyrmL~dfv 156 (354)
T KOG0025|consen 104 WVIPLS---------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAATLSVNPCTAYRMLKDFV 156 (354)
T ss_pred eEeecC---------------------------CCCccceeeEeecccceEEcCCcCChhhhheeccCchHHHHHHHHHH
Confidence 886533 36799999999999999999999999999999844 4556665 667
Q ss_pred CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh----HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413 313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK----LKTAKEMGADATVLIDRNHSLEEISTHIIELLQG 387 (408)
Q Consensus 313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~----~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~ 387 (408)
.++++++++..|+ .++|+.++|+|+++|.+.|-++ |+... .+.++.+||+++|......+. +..+.....
T Consensus 157 ~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvV-RdR~~ieel~~~Lk~lGA~~ViTeeel~~~----~~~k~~~~~ 231 (354)
T KOG0025|consen 157 QLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVV-RDRPNIEELKKQLKSLGATEVITEEELRDR----KMKKFKGDN 231 (354)
T ss_pred hcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEe-ecCccHHHHHHHHHHcCCceEecHHHhcch----hhhhhhccC
Confidence 8999999999999 9999999999999999966555 55333 355677999999975332111 112222234
Q ss_pred CCCceEEEcccchhhhhh
Q psy1413 388 EQPDKTIDCSGIESTIKL 405 (408)
Q Consensus 388 ~~~d~i~d~~g~~~~~~~ 405 (408)
..+.+.|||+|+.++...
T Consensus 232 ~~prLalNcVGGksa~~i 249 (354)
T KOG0025|consen 232 PRPRLALNCVGGKSATEI 249 (354)
T ss_pred CCceEEEeccCchhHHHH
Confidence 578999999999877543
No 204
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.61 E-value=2.3e-14 Score=127.77 Aligned_cols=126 Identities=21% Similarity=0.148 Sum_probs=109.6
Q ss_pred CccceeEEeeccceeeeCCCCC---Ccccccccchhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeE
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHV---SLEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRV 344 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~---~~~~aa~~~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~v 344 (408)
..+|++|..++.+.+.++.+.. +.....+-++-.|||.++ +....++++||+|.++ |++|..+.|++|..|+| |
T Consensus 100 ~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~r-V 178 (340)
T COG2130 100 VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCR-V 178 (340)
T ss_pred cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccchHHHHHHHhhCCe-E
Confidence 3489999999999999998543 223333445777899987 7788999999999999 99999999999999998 9
Q ss_pred EEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 345 VITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 345 v~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
|.+..+++|.+++++ +|.|.+||++. +++.+.++++.. +|+|+.||++|++-
T Consensus 179 VGiaGg~eK~~~l~~~lGfD~~idyk~----~d~~~~L~~a~P-~GIDvyfeNVGg~v 231 (340)
T COG2130 179 VGIAGGAEKCDFLTEELGFDAGIDYKA----EDFAQALKEACP-KGIDVYFENVGGEV 231 (340)
T ss_pred EEecCCHHHHHHHHHhcCCceeeecCc----ccHHHHHHHHCC-CCeEEEEEcCCchH
Confidence 999999999999977 99999999999 799999999984 79999999999863
No 205
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.58 E-value=8.1e-14 Score=132.92 Aligned_cols=123 Identities=22% Similarity=0.269 Sum_probs=96.2
Q ss_pred cceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe
Q psy1413 272 NLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITD 348 (408)
Q Consensus 272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~ 348 (408)
+|++|..++.+.++++|+++++++++.++ +..++++++ ....++++++++|+|+ |++|+.++++++.+ ..+.+++
T Consensus 92 ~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~--~~~~~~~ 169 (337)
T cd08275 92 GYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTV--PNVTVVG 169 (337)
T ss_pred eeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHc--cCcEEEE
Confidence 35567777778899999999988777666 677788886 5577889999999999 99999999999998 2233333
Q ss_pred -cChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 349 -ILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 349 -~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
..+++.+.++++|++.+++.+. .+..+.+++.+ ++++|.++||+|+..
T Consensus 170 ~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~~~~~~-~~~~d~v~~~~g~~~ 218 (337)
T cd08275 170 TASASKHEALKENGVTHVIDYRT----QDYVEEVKKIS-PEGVDIVLDALGGED 218 (337)
T ss_pred eCCHHHHHHHHHcCCcEEeeCCC----CcHHHHHHHHh-CCCceEEEECCcHHH
Confidence 2355778888899999988766 56667777777 468999999998754
No 206
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.56 E-value=8.1e-15 Score=139.60 Aligned_cols=219 Identities=16% Similarity=0.089 Sum_probs=147.8
Q ss_pred CCeeeecccchhhhhcCCCCC-CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc---cCcccccC-Ccceecccee
Q psy1413 1 MHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV---PEFRNVCL-SPILRRRFSL 75 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~-~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~---~~~~~~~~-~~~~~~p~~~ 75 (408)
+.++|+|++|..... +.... .+...+.++|+|++|+|+++|++ ++++||||+.. .++...+. +.++..|+++
T Consensus 39 v~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~~~~lP~~~ 115 (329)
T cd05288 39 TLYLSVDPYMRGWMS-DAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSGFLGWQEYAVVDGASGLRKLDPSL 115 (329)
T ss_pred EEEEecCHHHhhhhc-cCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEecccceEEEEEecchhhcEECCccc
Confidence 458999998876542 21111 11223567899999999999964 79999999854 24456666 7888888887
Q ss_pred e--eccccc-CCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCc-----------------------
Q psy1413 76 R--FREQKP-IEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHE----------------------- 127 (408)
Q Consensus 76 ~--~~~~~~-lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~----------------------- 127 (408)
+ +++... ++.+..+++.+...... ..+++++|+| +|.+|++++++++.+|+.
T Consensus 116 ~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~ 195 (329)
T cd05288 116 GLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAA 195 (329)
T ss_pred CCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceE
Confidence 4 323333 55554444422111111 2468899998 689999998888877653
Q ss_pred -------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-c-----ccCHHHHHhcCcEEEEeec
Q psy1413 128 -------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-V-----KIPLVLTMTKEIDIRGVFR 180 (408)
Q Consensus 128 -------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~-----~~~~~~~~~~~~~l~g~~~ 180 (408)
++.+++++|... .++++++++|+++.+|..... . .++...++.+++++.+...
T Consensus 196 ~~~~~~~~~~~v~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 275 (329)
T cd05288 196 INYKTPDLAEALKEAAPDGIDVYFDNVGGEILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIV 275 (329)
T ss_pred EecCChhHHHHHHHhccCCceEEEEcchHHHHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecc
Confidence 222333333211 468899999999999965432 1 2345566789999988764
Q ss_pred CC------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 181 YA------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 181 ~~------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
.. +.+.++++++.++.+++.+ .+.++++++.++++.+.+++.
T Consensus 276 ~~~~~~~~~~~~~~~~~~~~g~i~~~~--~~~~~l~~~~~a~~~~~~~~~ 323 (329)
T cd05288 276 SDYADRFPEALAELAKWLAEGKLKYRE--DVVEGLENAPEAFLGLFTGKN 323 (329)
T ss_pred hhhHHHHHHHHHHHHHHHHCCCccccc--cccccHHHHHHHHHHHhcCCC
Confidence 32 3478889999999988664 444899999999999987653
No 207
>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.56 E-value=9.4e-14 Score=132.49 Aligned_cols=157 Identities=26% Similarity=0.311 Sum_probs=119.9
Q ss_pred cCceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-h
Q psy1413 233 CDRVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-R 310 (408)
Q Consensus 233 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~ 310 (408)
+++|...+...| +.+.+..|.....+|. ..+|+|++|..++++.++++|+++++.+++.++ +..++++++ .
T Consensus 82 Gd~V~~~~~~~~------~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~ 154 (336)
T cd08276 82 GDRVVPTFFPNW------LDGPPTAEDEASALGG-PIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFG 154 (336)
T ss_pred CCEEEEeccccc------cccccccccccccccc-ccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHh
Confidence 666655433333 2333344443333332 247899999999999999999999988777766 667788877 3
Q ss_pred ccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413 311 RAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQP 390 (408)
Q Consensus 311 ~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
...++++++++|+|+|++|+.++++++++|++ ++++++++++.+.++++|++.+++.+.. .+..+.+++.+.++++
T Consensus 155 ~~~~~~g~~vli~g~g~~g~~~~~~a~~~G~~-v~~~~~~~~~~~~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~ 230 (336)
T cd08276 155 LGPLKPGDTVLVQGTGGVSLFALQFAKAAGAR-VIATSSSDEKLERAKALGADHVINYRTT---PDWGEEVLKLTGGRGV 230 (336)
T ss_pred hcCCCCCCEEEEECCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHcCCCEEEcCCcc---cCHHHHHHHHcCCCCC
Confidence 46788999999997799999999999999998 8888889999999988999999886541 3455667788877899
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|.+||++|..
T Consensus 231 d~~i~~~~~~ 240 (336)
T cd08276 231 DHVVEVGGPG 240 (336)
T ss_pred cEEEECCChH
Confidence 9999998854
No 208
>KOG1198|consensus
Probab=99.54 E-value=8.8e-15 Score=138.47 Aligned_cols=228 Identities=20% Similarity=0.221 Sum_probs=157.1
Q ss_pred CeeeecccchhhhhcCCCCCCC--CCCCccccCCccEE---EEEeC-CCCCCCCCCCEEEEc------cCcccccCCcce
Q psy1413 2 HCVGICGSDVHYLTHGQIGDFR--LSDPMIVGHEASGI---VSKVG-AKVKHLKVDNQTRFV------PEFRNVCLSPIL 69 (408)
Q Consensus 2 ~a~gic~sDl~~~~~g~~~~~~--~~~P~i~GhE~~G~---Vv~vG-~~v~~~~vGdrV~~~------~~~~~~~~~~~~ 69 (408)
.++++|+.|+.+. .|.....+ ..+|.+++.++.|+ +...| ..+..++.||++... +++...+....+
T Consensus 40 ~a~a~NpiD~~~~-~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~ 118 (347)
T KOG1198|consen 40 VAVALNPIDLKIR-NGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLV 118 (347)
T ss_pred EEeccChHHHHHH-ccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeeeEEeeccCCCceeeEEEcchhhcc
Confidence 5788899999988 44433322 36786666666666 34444 334567788887643 356677778889
Q ss_pred eccceeeecccccCCCCCCcceEEEEeee------ee-cCCeEEEEc-cCccccccccccccccC---------------
Q psy1413 70 RRRFSLRFREQKPIEDPDDHEVLLEMHCV------GI-CGSDVHYLT-HGQIGDFRLSDPMIVGH--------------- 126 (408)
Q Consensus 70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~------~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~--------------- 126 (408)
+.|+++++++++.+|..+.+++.+..... .. .++.+||+| +|++|++++|+|+..|+
T Consensus 119 ~~P~~l~~~~aa~~p~~~~tA~~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~ 198 (347)
T KOG1198|consen 119 KIPESLSFEEAAALPLAALTALSALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV 198 (347)
T ss_pred CCCCccChhhhhcCchHHHHHHHHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH
Confidence 99999999888889999888886655555 34 467899986 77999999999998873
Q ss_pred --------------------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHH---H-H-----
Q psy1413 127 --------------------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLV---L-T----- 168 (408)
Q Consensus 127 --------------------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~---~-~----- 168 (408)
.++.+++++|... .++.++..+|+...++...+ ..+.+.. . +
T Consensus 199 k~lGAd~vvdy~~~~~~e~~kk~~~~~~DvVlD~vg~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 278 (347)
T KOG1198|consen 199 KKLGADEVVDYKDENVVELIKKYTGKGVDVVLDCVGGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKL 278 (347)
T ss_pred HHcCCcEeecCCCHHHHHHHHhhcCCCccEEEECCCCCccccchhhhccCCceEEEEeccccccccccccchhhhhhhhh
Confidence 3778889988743 56888888887666664332 1111111 0 1
Q ss_pred ---HhcCcEEEEe-ecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEc
Q psy1413 169 ---MTKEIDIRGV-FRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHC 233 (408)
Q Consensus 169 ---~~~~~~l~g~-~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~ 233 (408)
..++...... .... +.++.+.++++++++ ++.+.+.||++++.+||+.+.+ +...+|+++..
T Consensus 279 ~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gki--kp~i~~~~p~~~~~ea~~~~~~-~~~~GK~vl~~ 345 (347)
T KOG1198|consen 279 YSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKI--KPVIDSVYPFSQAKEAFEKLEK-SHATGKVVLEK 345 (347)
T ss_pred eeeeeeccceeeeeecCCHHHHHHHHHHHHcCcc--cCCcceeeeHHHHHHHHHHHhh-cCCcceEEEEe
Confidence 1111111111 1122 568999999999955 6779999999999999999998 44566776654
No 209
>KOG0023|consensus
Probab=99.54 E-value=2.6e-14 Score=128.36 Aligned_cols=219 Identities=23% Similarity=0.318 Sum_probs=164.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEE-cc-------Cc-----ccccC--
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF-VP-------EF-----RNVCL-- 65 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~-~~-------~~-----~~~~~-- 65 (408)
|++|||||||+|.+ .|.++. .++|+++|||.+|+|+++|++|++||+||||-+ .. ++ -.+|.
T Consensus 43 I~~cGIChsDlH~~-~gdwg~--s~~PlV~GHEiaG~VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~ 119 (360)
T KOG0023|consen 43 IEYCGVCHSDLHAW-KGDWGL--SKYPLVPGHEIAGVVVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKM 119 (360)
T ss_pred EEEEeccchhHHHh-hccCCc--ccCCccCCceeeEEEEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCce
Confidence 57999999999999 666554 689999999999999999999999999999942 11 11 01222
Q ss_pred --------------------------CcceeccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEccCccccccc
Q psy1413 66 --------------------------SPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTHGQIGDFRL 118 (408)
Q Consensus 66 --------------------------~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~G~vG~~~i 118 (408)
..+..+|+++..+.++++....-|.+-.. ...++ +|+++.|.|+|++|++++
T Consensus 120 ~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~aAPlLCaGITvYspL-k~~g~~pG~~vgI~GlGGLGh~aV 198 (360)
T KOG0023|consen 120 HFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASAAPLLCAGITVYSPL-KRSGLGPGKWVGIVGLGGLGHMAV 198 (360)
T ss_pred eEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhccchhhcceEEeehh-HHcCCCCCcEEEEecCcccchHHH
Confidence 22333344444444444443333333211 11111 588999999999999999
Q ss_pred cccccccCcceeE---------------------------------------EEccC--c---hHHHHhhccCCcEEEEE
Q psy1413 119 SDPMIVGHEASGI---------------------------------------VSKVG--A---KVKHLKATRPGGCLVIV 154 (408)
Q Consensus 119 ~~a~~~G~~~~~v---------------------------------------v~~~g--~---~~~~~~~l~~gG~iv~~ 154 (408)
|+||++|.++.++ ++++. + -..+++++|++|++|++
T Consensus 199 q~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~v 278 (360)
T KOG0023|consen 199 QYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDIMKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLV 278 (360)
T ss_pred HHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHHHHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEE
Confidence 9999999743222 11111 0 01579999999999999
Q ss_pred ccCCCCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCc
Q psy1413 155 GAGSQDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNA 226 (408)
Q Consensus 155 G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~ 226 (408)
|.+..+..++...+.++.+.|.|+.-.+ .+.+++++++.++.++.. .+..+++++++||++|.+++...
T Consensus 279 g~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~~~ik~~---IE~v~~~~v~~a~erm~kgdV~y 348 (360)
T KOG0023|consen 279 GLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVARGLIKSP---IELVKLSEVNEAYERMEKGDVRY 348 (360)
T ss_pred eCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHcCCCcCc---eEEEehhHHHHHHHHHHhcCeeE
Confidence 9999999999999999999999999776 899999999999999764 67889999999999999987653
No 210
>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]
Probab=99.52 E-value=2.5e-14 Score=130.02 Aligned_cols=219 Identities=26% Similarity=0.354 Sum_probs=159.0
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEE---------------ccCcc----
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF---------------VPEFR---- 61 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~---------------~~~~~---- 61 (408)
|.|+|+||||+++++ +..+..+|.++|||++|+|++||++|+.+||||+|+. .+++.
T Consensus 34 i~AtGVCHTD~~~~~----G~~p~~~P~vLGHEgAGiVe~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~ 109 (366)
T COG1062 34 ITATGVCHTDAHTLS----GDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIR 109 (366)
T ss_pred EEEeeccccchhhhc----CCCCCCCceecccccccEEEEecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchh
Confidence 469999999999996 3455569999999999999999999999999999971 22211
Q ss_pred ccc-----CC----------cceeccceeeeccc--------ccCCCCCCcceEEEEeeeee-------------cCCeE
Q psy1413 62 NVC-----LS----------PILRRRFSLRFREQ--------KPIEDPDDHEVLLEMHCVGI-------------CGSDV 105 (408)
Q Consensus 62 ~~~-----~~----------~~~~~p~~~~~~~~--------~~lp~~~~~~~~~~~~~~~~-------------~g~~v 105 (408)
... .+ ..++.-.--+|.+. ++++...+.+.+..+.+... .|+++
T Consensus 110 ~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~p~~~a~llGCgV~TG~Gav~nta~v~~G~tv 189 (366)
T COG1062 110 ATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTV 189 (366)
T ss_pred hhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCCCccceEEEeeeeccChHHhhhcccCCCCCeE
Confidence 000 00 00110000112111 23333333333333332211 48999
Q ss_pred EEEccCccccccccccccccC-------------------------------------------cceeEEEccCchH---
Q psy1413 106 HYLTHGQIGDFRLSDPMIVGH-------------------------------------------EASGIVSKVGAKV--- 139 (408)
Q Consensus 106 lv~g~G~vG~~~i~~a~~~G~-------------------------------------------~~~~vv~~~g~~~--- 139 (408)
.|+|.|++|++++|-|+..|+ ..+.+++++|...
T Consensus 190 aV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A~~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~ 269 (366)
T COG1062 190 AVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELAKKFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMR 269 (366)
T ss_pred EEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHHHhcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHH
Confidence 999999999999998877665 3455677777654
Q ss_pred HHHhhccCCcEEEEEccCCCCccc--CHHHHHhcCcEEEEeecC----CCcHHHHHHHHHcCCCCCCCceeeeeccchHH
Q psy1413 140 KHLKATRPGGCLVIVGAGSQDVKI--PLVLTMTKEIDIRGVFRY----ANDYPIALAMVASGKVDVKKLITHNYLLEDTL 213 (408)
Q Consensus 140 ~~~~~l~~gG~iv~~G~~~~~~~~--~~~~~~~~~~~l~g~~~~----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~ 213 (408)
+++++++++|+.+++|.+.....+ +...++.. .+++|++.. +.++++++++..+|+++++++++|+++|+|++
T Consensus 270 ~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~g-r~~~Gs~~G~~~p~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~IN 348 (366)
T COG1062 270 QALEATHRGGTSVIIGVAGAGQEISTRPFQLVTG-RVWKGSAFGGARPRSDIPRLVDLYMAGKLPLDRLVTHTIPLEDIN 348 (366)
T ss_pred HHHHHHhcCCeEEEEecCCCCceeecChHHeecc-ceEEEEeecCCccccchhHHHHHHHcCCCchhHHhhccccHHHHH
Confidence 789999999999999988765544 44455555 899998854 37899999999999999999999999999999
Q ss_pred HHHHHHHcCCC
Q psy1413 214 HAFETAKTGAG 224 (408)
Q Consensus 214 ~a~~~~~~~~~ 224 (408)
|||++|.+++.
T Consensus 349 eaf~~m~~G~~ 359 (366)
T COG1062 349 EAFDLMHEGKS 359 (366)
T ss_pred HHHHHHhCCce
Confidence 99999999753
No 211
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=99.52 E-value=2.7e-13 Score=129.13 Aligned_cols=124 Identities=22% Similarity=0.164 Sum_probs=103.4
Q ss_pred ccceeEEeecc-ceeeeCCCCCC--ccc-cc-ccchhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413 271 GNLSRYYRHAA-DFCHKLPDHVS--LEE-GA-LLEPLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASR 343 (408)
Q Consensus 271 g~~~~~~~~~~-~~~~~~p~~~~--~~~-aa-~~~~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~ 343 (408)
++|++|+.+++ +.++++|++++ ..+ ++ +...+.++++++ ....+.++++++|+|+ |++|+.++|+++.+|++
T Consensus 94 ~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~- 172 (329)
T cd05288 94 LGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGAR- 172 (329)
T ss_pred cceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCE-
Confidence 47999999999 99999999985 333 33 334677888887 4467889999999997 99999999999999996
Q ss_pred EEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 344 VVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 344 vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
++.+++++++.+.+++ +|++.+++.++ .+..+.+.+.+. +++|++|||+|+.
T Consensus 173 vi~~~~~~~~~~~~~~~~g~~~~~~~~~----~~~~~~v~~~~~-~~~d~vi~~~g~~ 225 (329)
T cd05288 173 VVGIAGSDEKCRWLVEELGFDAAINYKT----PDLAEALKEAAP-DGIDVYFDNVGGE 225 (329)
T ss_pred EEEEeCCHHHHHHHHhhcCCceEEecCC----hhHHHHHHHhcc-CCceEEEEcchHH
Confidence 8888889999999888 99999999876 566777777774 6899999999874
No 212
>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases. Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so
Probab=99.50 E-value=3.4e-13 Score=128.13 Aligned_cols=124 Identities=27% Similarity=0.326 Sum_probs=100.0
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhc---cCcC-CCCEEEEEec-chhHHHHHHHHHHhCCCe
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRR---AGVT-LGSKVLITGA-GPIGLVTLLTARALGASR 343 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~---~~~~-~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~ 343 (408)
+|+|++|+.++++.++++|++++.++++.++ ...++++++.. ..+. .+++++|+|+ |++|+.++|+++.+|++
T Consensus 95 ~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~- 173 (325)
T cd05280 95 DGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFTAALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYT- 173 (325)
T ss_pred CceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHHHHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCE-
Confidence 6899999999999999999999998888777 45566666532 2334 3569999999 99999999999999998
Q ss_pred EEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 344 VVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 344 vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
|+++++++++.+.++++|++.+++.++ . ...+.+...++++|.+||++|+.
T Consensus 174 v~~~~~~~~~~~~~~~~g~~~~~~~~~----~--~~~~~~~~~~~~~d~vi~~~~~~ 224 (325)
T cd05280 174 VVALTGKEEQADYLKSLGASEVLDRED----L--LDESKKPLLKARWAGAIDTVGGD 224 (325)
T ss_pred EEEEeCCHHHHHHHHhcCCcEEEcchh----H--HHHHHHHhcCCCccEEEECCchH
Confidence 888889999999999999999987643 1 12233344456799999999874
No 213
>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.48 E-value=4.8e-13 Score=125.98 Aligned_cols=118 Identities=31% Similarity=0.382 Sum_probs=98.4
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEE
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVIT 347 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~ 347 (408)
.|+|++|..++++.++++|+++++++++.++ ...++++++......++++++|+|+ |++|+.++++++.+|++ ++.+
T Consensus 85 ~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~-v~~~ 163 (305)
T cd08270 85 MGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGAH-VVAV 163 (305)
T ss_pred CcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEEE
Confidence 6899999999999999999999998888777 5677888875555556999999999 99999999999999996 8888
Q ss_pred ecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 348 DILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 348 ~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
++++++.+.++++|++.+++... +++ ++++|+++|++|+..
T Consensus 164 ~~~~~~~~~~~~~g~~~~~~~~~------------~~~-~~~~d~vl~~~g~~~ 204 (305)
T cd08270 164 VGSPARAEGLRELGAAEVVVGGS------------ELS-GAPVDLVVDSVGGPQ 204 (305)
T ss_pred eCCHHHHHHHHHcCCcEEEeccc------------ccc-CCCceEEEECCCcHH
Confidence 88999999999999886664321 122 247999999998753
No 214
>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members. This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD
Probab=99.46 E-value=4.1e-13 Score=124.71 Aligned_cols=121 Identities=27% Similarity=0.351 Sum_probs=100.0
Q ss_pred cceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh
Q psy1413 272 NLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILE 351 (408)
Q Consensus 272 ~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~ 351 (408)
.|++|..++++.++++|++++.++++.+....++++++....++++++++|+|+|++|++++++++.+|+++|+++++++
T Consensus 53 ~~~~~~~v~~~~~~~ip~~l~~~~aa~~~~~~ta~~~~~~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~ 132 (277)
T cd08255 53 PHAERVVVPANLLVPLPDGLPPERAALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDA 132 (277)
T ss_pred CcceEEEcCHHHeeECcCCCCHHHhHHHHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCH
Confidence 58999999999999999999987777666677788887778889999999997799999999999999998788888899
Q ss_pred hhHHHHHHcC-CCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhh
Q psy1413 352 HKLKTAKEMG-ADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIK 404 (408)
Q Consensus 352 ~~~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~ 404 (408)
++.+.++++| ++.+++... ..+.++++|.+||++|......
T Consensus 133 ~~~~~~~~~g~~~~~~~~~~------------~~~~~~~~d~vl~~~~~~~~~~ 174 (277)
T cd08255 133 ARRELAEALGPADPVAADTA------------DEIGGRGADVVIEASGSPSALE 174 (277)
T ss_pred HHHHHHHHcCCCccccccch------------hhhcCCCCCEEEEccCChHHHH
Confidence 9999989999 566654322 1234568999999988655443
No 215
>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=99.39 E-value=4.1e-12 Score=121.07 Aligned_cols=122 Identities=28% Similarity=0.294 Sum_probs=97.3
Q ss_pred CccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEE
Q psy1413 270 HGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVI 346 (408)
Q Consensus 270 ~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~ 346 (408)
.|+|++|..++.+.+.++|++++.++++.++ ...++++++ ....+.++++++|+|+ |++|+.++++++.+|++ |+.
T Consensus 91 ~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~-v~~ 169 (331)
T cd08273 91 VGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAE-VYG 169 (331)
T ss_pred CcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCE-EEE
Confidence 4889999999999999999999988877665 677788877 4467899999999998 99999999999999997 777
Q ss_pred EecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 347 TDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 347 ~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
+.+ +++.+.++++|++. ++.+. .+..+. ... ++++|.+|||+|+..
T Consensus 170 ~~~-~~~~~~~~~~g~~~-~~~~~----~~~~~~--~~~-~~~~d~vl~~~~~~~ 215 (331)
T cd08273 170 TAS-ERNHAALRELGATP-IDYRT----KDWLPA--MLT-PGGVDVVFDGVGGES 215 (331)
T ss_pred EeC-HHHHHHHHHcCCeE-EcCCC----cchhhh--hcc-CCCceEEEECCchHH
Confidence 776 88888888899764 44433 222222 233 358999999998765
No 216
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=99.36 E-value=4e-13 Score=106.38 Aligned_cols=69 Identities=32% Similarity=0.477 Sum_probs=51.5
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceec
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRR 71 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~ 71 (408)
|+++|||++|++.+.+. .....++|.++|||++|+|+++|++|++|++||||++.+...+..+..+...
T Consensus 8 v~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~ 76 (109)
T PF08240_consen 8 VRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSG 76 (109)
T ss_dssp EEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTT
T ss_pred EEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccccceeeeecccCccCchhhcCC
Confidence 47999999999999532 2345688999999999999999999999999999998765544333333333
No 217
>KOG0022|consensus
Probab=99.32 E-value=5e-12 Score=113.33 Aligned_cols=218 Identities=22% Similarity=0.294 Sum_probs=154.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEE---------------cc-------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRF---------------VP------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~---------------~~------- 58 (408)
+.++++||||.+.+. |. .....||.|+|||++|+|+.+|++|+++++||+|+. ..
T Consensus 39 I~~t~vCHTD~~~~~-g~--~~~~~fP~IlGHEaaGIVESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~ 115 (375)
T KOG0022|consen 39 ILATGVCHTDAYVWS-GK--DPEGLFPVILGHEAAGIVESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFR 115 (375)
T ss_pred EEEEeeccccceeec-CC--CccccCceEecccceeEEEEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhc
Confidence 358999999999984 42 245678999999999999999999999999999971 00
Q ss_pred -Cc--c----------cccCCcceeccceeeeccc--------ccCCCCCCcceEEEEeeeee--------------cCC
Q psy1413 59 -EF--R----------NVCLSPILRRRFSLRFREQ--------KPIEDPDDHEVLLEMHCVGI--------------CGS 103 (408)
Q Consensus 59 -~~--~----------~~~~~~~~~~p~~~~~~~~--------~~lp~~~~~~~~~~~~~~~~--------------~g~ 103 (408)
.. . ...-+.+++....-+|.|+ +++....+..-. .+..+++ .|+
T Consensus 116 ~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId~~aPl~kv-cLLgCGvsTG~GAa~~~Akv~~Gs 194 (375)
T KOG0022|consen 116 ADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKIDPSAPLEKV-CLLGCGVSTGYGAAWNTAKVEPGS 194 (375)
T ss_pred ccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecCCCCChhhe-eEeeccccccchhhhhhcccCCCC
Confidence 00 0 0001112221111112111 222222222211 1222222 489
Q ss_pred eEEEEccCccccccccccccccC--------------------------------------------cceeEEEccCchH
Q psy1413 104 DVHYLTHGQIGDFRLSDPMIVGH--------------------------------------------EASGIVSKVGAKV 139 (408)
Q Consensus 104 ~vlv~g~G~vG~~~i~~a~~~G~--------------------------------------------~~~~vv~~~g~~~ 139 (408)
++.|+|.|++|+++++-+++.|+ .++-.++++|...
T Consensus 195 tvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~ak~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~ 274 (375)
T KOG0022|consen 195 TVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKAKEFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVS 274 (375)
T ss_pred EEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHHHhcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHH
Confidence 99999999999999999988886 3556677888664
Q ss_pred ---HHHhhccCC-cEEEEEccCCCCccc--CHHHHHhcCcEEEEee----cCCCcHHHHHHHHHcCCCCCCCceeeeecc
Q psy1413 140 ---KHLKATRPG-GCLVIVGAGSQDVKI--PLVLTMTKEIDIRGVF----RYANDYPIALAMVASGKVDVKKLITHNYLL 209 (408)
Q Consensus 140 ---~~~~~l~~g-G~iv~~G~~~~~~~~--~~~~~~~~~~~l~g~~----~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l 209 (408)
+++.+.+.| |+-+.+|++.....+ +...++ ++.++.|+. ....+++.+++...+++++++++|+|++||
T Consensus 275 ~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~-~GR~~~Gs~FGG~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f 353 (375)
T KOG0022|consen 275 TMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLV-TGRTWKGSAFGGFKSKSDIPKLVKDYMKKKLNLDEFITHELPF 353 (375)
T ss_pred HHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhc-cccEEEEEecccccchhhhhHHHHHHHhCccchhhhhhcccCH
Confidence 678888888 999999988765544 444444 356666543 345889999999999999999999999999
Q ss_pred chHHHHHHHHHcCC
Q psy1413 210 EDTLHAFETAKTGA 223 (408)
Q Consensus 210 ~~~~~a~~~~~~~~ 223 (408)
+++++||++|.+++
T Consensus 354 ~~In~AF~ll~~Gk 367 (375)
T KOG0022|consen 354 EEINKAFDLLHEGK 367 (375)
T ss_pred HHHHHHHHHHhCCc
Confidence 99999999999975
No 218
>KOG1202|consensus
Probab=99.21 E-value=2.4e-11 Score=124.23 Aligned_cols=134 Identities=19% Similarity=0.190 Sum_probs=115.2
Q ss_pred eecccCCCCccceeEEeeccceeeeCCCCCCcccccccc-hhhhhhhhh-hccCcCCCCEEEEEec-chhHHHHHHHHHH
Q psy1413 262 FFCATPPDHGNLSRYYRHAADFCHKLPDHVSLEEGALLE-PLSVGVHAC-RRAGVTLGSKVLITGA-GPIGLVTLLTARA 338 (408)
Q Consensus 262 ~~~~~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~-~~~~~~~~~-~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~ 338 (408)
+.++.. ...+.+.-+.++.+.+..+|.+..+++|++.| .++|+||++ .+...++++++||+++ ||+|+++|.++-+
T Consensus 1497 RvM~mv-pAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa 1575 (2376)
T KOG1202|consen 1497 RVMGMV-PAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIALA 1575 (2376)
T ss_pred EEEEee-ehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHHHH
Confidence 444443 35677788888999999999999999999999 688899998 7888999999999987 9999999999999
Q ss_pred hCCCeEEEEecChhhHHHHHH-cC---CCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 339 LGASRVVITDILEHKLKTAKE-MG---ADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 339 ~Ga~~vv~~~~~~~~~~~~~~-~g---a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
+|.+ |+.+..+.+|.+++++ |. ...+-|+++ .+++..+...|.|+|+|+|+|+...+-
T Consensus 1576 ~G~~-VFTTVGSaEKRefL~~rFPqLqe~~~~NSRd----tsFEq~vl~~T~GrGVdlVLNSLaeEk 1637 (2376)
T KOG1202|consen 1576 HGCT-VFTTVGSAEKREFLLKRFPQLQETNFANSRD----TSFEQHVLWHTKGRGVDLVLNSLAEEK 1637 (2376)
T ss_pred cCCE-EEEecCcHHHHHHHHHhchhhhhhccccccc----ccHHHHHHHHhcCCCeeeehhhhhHHH
Confidence 9998 8888889999888765 33 677778887 889999999999999999999876543
No 219
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=99.20 E-value=5.1e-11 Score=97.46 Aligned_cols=76 Identities=36% Similarity=0.567 Sum_probs=69.8
Q ss_pred hhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhhhhhc
Q psy1413 327 PIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIESTIKLG 406 (408)
Q Consensus 327 ~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~~ 406 (408)
|+|++++|+|+.+| .+|++++++++|++.++++|+++++++++ .++.+.++++++++++|++|||+|+..+++.+
T Consensus 1 ~vG~~a~q~ak~~G-~~vi~~~~~~~k~~~~~~~Ga~~~~~~~~----~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~ 75 (130)
T PF00107_consen 1 GVGLMAIQLAKAMG-AKVIATDRSEEKLELAKELGADHVIDYSD----DDFVEQIRELTGGRGVDVVIDCVGSGDTLQEA 75 (130)
T ss_dssp HHHHHHHHHHHHTT-SEEEEEESSHHHHHHHHHTTESEEEETTT----SSHHHHHHHHTTTSSEEEEEESSSSHHHHHHH
T ss_pred ChHHHHHHHHHHcC-CEEEEEECCHHHHHHHHhhcccccccccc----cccccccccccccccceEEEEecCcHHHHHHH
Confidence 68999999999999 55999999999999999999999999988 77999999999888999999999988887765
Q ss_pred C
Q psy1413 407 M 407 (408)
Q Consensus 407 ~ 407 (408)
+
T Consensus 76 ~ 76 (130)
T PF00107_consen 76 I 76 (130)
T ss_dssp H
T ss_pred H
Confidence 4
No 220
>KOG1196|consensus
Probab=99.14 E-value=4e-10 Score=100.61 Aligned_cols=140 Identities=17% Similarity=0.154 Sum_probs=107.3
Q ss_pred CccccccceeecccCCCCccceeEEeecccee--eeCCCCCC----cccccccchhhhhhhhh-hccCcCCCCEEEEEec
Q psy1413 253 GRYNLCRQIFFCATPPDHGNLSRYYRHAADFC--HKLPDHVS----LEEGALLEPLSVGVHAC-RRAGVTLGSKVLITGA 325 (408)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~--~~~p~~~~----~~~aa~~~~~~~~~~~~-~~~~~~~~~~~lv~G~ 325 (408)
+++++-++...++.. +|.+|.++++... ++++.+.+ .-...+-.+-.|||... .....+.++|++|.|+
T Consensus 87 ~~~~~~~GD~v~g~~----gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSaA 162 (343)
T KOG1196|consen 87 GHPNYKKGDLVWGIV----GWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSAA 162 (343)
T ss_pred CCCCCCcCceEEEec----cceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEeec
Confidence 445666666666654 8999999987654 44444222 22233333566777776 6678899999999999
Q ss_pred -chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchh
Q psy1413 326 -GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIES 401 (408)
Q Consensus 326 -G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~ 401 (408)
|++|+.+.|+++.+|.+ ||.+..+++|.+.++. +|.|..+||.+. .++.+.+++.. .+++|+.||.+|+.-
T Consensus 163 sGAvGql~GQ~Ak~~Gc~-VVGsaGS~EKv~ll~~~~G~d~afNYK~e---~~~~~aL~r~~-P~GIDiYfeNVGG~~ 235 (343)
T KOG1196|consen 163 SGAVGQLVGQFAKLMGCY-VVGSAGSKEKVDLLKTKFGFDDAFNYKEE---SDLSAALKRCF-PEGIDIYFENVGGKM 235 (343)
T ss_pred cchhHHHHHHHHHhcCCE-EEEecCChhhhhhhHhccCCccceeccCc---cCHHHHHHHhC-CCcceEEEeccCcHH
Confidence 99999999999999995 9999999999999855 799999999882 36777777754 579999999999763
No 221
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=99.03 E-value=2.3e-09 Score=96.14 Aligned_cols=205 Identities=16% Similarity=0.093 Sum_probs=132.6
Q ss_pred CCCccccCCccEEEEEeC--CCCCCCCCCCEEEEccCccc---ccCCcceeccce-eeec-ccccCCCCCCcceEEEEee
Q psy1413 25 SDPMIVGHEASGIVSKVG--AKVKHLKVDNQTRFVPEFRN---VCLSPILRRRFS-LRFR-EQKPIEDPDDHEVLLEMHC 97 (408)
Q Consensus 25 ~~P~i~GhE~~G~Vv~vG--~~v~~~~vGdrV~~~~~~~~---~~~~~~~~~p~~-~~~~-~~~~lp~~~~~~~~~~~~~ 97 (408)
.+|+-+|-..+|.++... |+...|++||-|+....+.. .+.........+ .... ..-.+--+.-|++......
T Consensus 66 ~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~i 145 (340)
T COG2130 66 APPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDI 145 (340)
T ss_pred CCCcCCCceeECCeeEEEEecCCCCCCCCCEEEecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHh
Confidence 457777877776555444 56788999999986654432 222222222110 0000 0011111233333222211
Q ss_pred eee-cCCeEEEEc-cCccccccccccccccC------------------------------------------cceeEEE
Q psy1413 98 VGI-CGSDVHYLT-HGQIGDFRLSDPMIVGH------------------------------------------EASGIVS 133 (408)
Q Consensus 98 ~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~------------------------------------------~~~~vv~ 133 (408)
... .|++++|.+ +|++|..+.|+||..|+ ..+..++
T Consensus 146 gqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyfe 225 (340)
T COG2130 146 GQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYFE 225 (340)
T ss_pred cCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEEE
Confidence 112 378888876 89999999999998776 3455577
Q ss_pred ccCchH--HHHhhccCCcEEEEEcc---CCCC-cccC---HHHHHhcCcEEEEeecCC-------CcHHHHHHHHHcCCC
Q psy1413 134 KVGAKV--KHLKATRPGGCLVIVGA---GSQD-VKIP---LVLTMTKEIDIRGVFRYA-------NDYPIALAMVASGKV 197 (408)
Q Consensus 134 ~~g~~~--~~~~~l~~gG~iv~~G~---~~~~-~~~~---~~~~~~~~~~l~g~~~~~-------~~~~~~~~l~~~g~~ 197 (408)
++|... ..+..|+..+|++.+|. +..+ .+.- +..++.|.+++.|....+ +.++++..|+++||+
T Consensus 226 NVGg~v~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi 305 (340)
T COG2130 226 NVGGEVLDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKI 305 (340)
T ss_pred cCCchHHHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCce
Confidence 888765 67999999999999994 2222 2222 235778899999987521 446889999999999
Q ss_pred CCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 198 DVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 198 ~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+... +.+-.||.+++||.-+.++++ .+|++++
T Consensus 306 ~~~e--ti~dGlEnaP~Af~gLl~G~N-~GK~vvK 337 (340)
T COG2130 306 QYRE--TIVDGLENAPEAFIGLLSGKN-FGKLVVK 337 (340)
T ss_pred eeEe--eehhhhhccHHHHHHHhcCCc-cceEEEE
Confidence 8765 555569999999999999875 5566655
No 222
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=98.93 E-value=2.8e-09 Score=102.74 Aligned_cols=135 Identities=16% Similarity=0.207 Sum_probs=113.2
Q ss_pred ecCCeEEEEccCccccccccccccccC------------------------------cceeEEEccCchH---H-HHhhc
Q psy1413 100 ICGSDVHYLTHGQIGDFRLSDPMIVGH------------------------------EASGIVSKVGAKV---K-HLKAT 145 (408)
Q Consensus 100 ~~g~~vlv~g~G~vG~~~i~~a~~~G~------------------------------~~~~vv~~~g~~~---~-~~~~l 145 (408)
+.|++++|+|.|.+|+..++.++.+|+ +++.+++++|... + .++.+
T Consensus 200 l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~~~G~~~~~~~e~v~~aDVVI~atG~~~~i~~~~l~~m 279 (413)
T cd00401 200 IAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQAAMEGYEVMTMEEAVKEGDIFVTTTGNKDIITGEHFEQM 279 (413)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHHHhcCCEEccHHHHHcCCCEEEECCCCHHHHHHHHHhcC
Confidence 468999999999999988888877775 3456667777543 3 48999
Q ss_pred cCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-C-cHH--HHHHHHHcCCC-CCCCceeee-----eccc-hHHH
Q psy1413 146 RPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA-N-DYP--IALAMVASGKV-DVKKLITHN-----YLLE-DTLH 214 (408)
Q Consensus 146 ~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~-~-~~~--~~~~l~~~g~~-~~~~~i~~~-----~~l~-~~~~ 214 (408)
++||+++.+|.+ +.+++...+..+++++.+++.+. + +|+ +.+.++++|++ ++..+++|. ++|+ |+.+
T Consensus 280 k~GgilvnvG~~--~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~ 357 (413)
T cd00401 280 KDGAIVCNIGHF--DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLA 357 (413)
T ss_pred CCCcEEEEeCCC--CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCcccCCCccceechhHHHHHHH
Confidence 999999999965 56789999999999999999885 3 566 79999999999 999999999 9999 9999
Q ss_pred HHHHHHcCCCCceEEEEEcCce
Q psy1413 215 AFETAKTGAGNAIKVMIHCDRV 236 (408)
Q Consensus 215 a~~~~~~~~~~~~kvvi~~~~v 236 (408)
+++.+.+++....||++.++.+
T Consensus 358 a~~l~~~~~~~~~kV~~~p~~~ 379 (413)
T cd00401 358 QIELWTNRDKYEVGVYFLPKKL 379 (413)
T ss_pred HHHHHhcCCcCCCcEEECCHHH
Confidence 9999999876667888777554
No 223
>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2. 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina
Probab=98.87 E-value=2.3e-09 Score=101.73 Aligned_cols=225 Identities=21% Similarity=0.237 Sum_probs=165.4
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~ 74 (408)
|+++|+|++|++.+. |.++. ...+|.++|||++|+|+++|++|+++++||||+..+ ++...+...++..|++
T Consensus 35 v~~~~~~~~d~~~~~-g~~~~-~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~ip~~ 112 (324)
T cd08292 35 TTLSPIHNHDLWTIR-GTYGY-KPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPLPDG 112 (324)
T ss_pred EEEccCCHHHHHHhc-CcCCC-CCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEECCCC
Confidence 468999999999884 33221 234688999999999999999999999999998754 4445666778888998
Q ss_pred eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc-------------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE------------------------- 127 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~------------------------- 127 (408)
+++++.+.++....+++... ....+ .+++++|+| .|.+|++++++|+.+|+.
T Consensus 113 ~~~~~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (324)
T cd08292 113 ISDEVAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAELRALGIGPVVST 191 (324)
T ss_pred CCHHHhhhccccHHHHHHHH-HhhCCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHHHhcCCCEEEcC
Confidence 88866665555444443221 11222 478899987 588999999999887763
Q ss_pred -----------------ceeEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecCC-----
Q psy1413 128 -----------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRYA----- 182 (408)
Q Consensus 128 -----------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~~----- 182 (408)
++.+++++|... +++++++++|+++.+|... ....+++..+.+++.++.+.....
T Consensus 192 ~~~~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (324)
T cd08292 192 EQPGWQDKVREAAGGAPISVALDSVGGKLAGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEM 271 (324)
T ss_pred CCchHHHHHHHHhCCCCCcEEEECCCChhHHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhc
Confidence 334444444322 5789999999999999753 345566666778999999876431
Q ss_pred ------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 183 ------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 183 ------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
..+++++++++++++++. +.+.|+++|+.+||+.+.++. ...|+++
T Consensus 272 ~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~~~~~~~a~~~~~~~~-~~~kvvv 323 (324)
T cd08292 272 SVEYRKRMIAELLTLALKGQLLLP--VEAVFDLGDAAKAAAASMRPG-RAGKVLL 323 (324)
T ss_pred CHHHHHHHHHHHHHHHHCCCccCc--cccEecHHHHHHHHHHHHcCC-CCceEEe
Confidence 357889999999998754 478899999999999998654 3455553
No 224
>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1.1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....
Probab=98.81 E-value=1.7e-09 Score=85.54 Aligned_cols=108 Identities=35% Similarity=0.605 Sum_probs=88.5
Q ss_pred cceEEEEeeeeecCCeEEEEccCccccccccccccccCcceeEEEccCchHHHHhhccCCcEEEEEccCCCCcccCHHHH
Q psy1413 89 HEVLLEMHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKATRPGGCLVIVGAGSQDVKIPLVLT 168 (408)
Q Consensus 89 ~~~~~~~~~~~~~g~~vlv~g~G~vG~~~i~~a~~~G~~~~~vv~~~g~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~ 168 (408)
.++++.+.++++++.++.+.-.. .......+..+|.|+.|+|+.+|...+.++.
T Consensus 2 ~eVlVkv~a~gic~~D~~~~~g~--~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~------------------------ 55 (109)
T PF08240_consen 2 GEVLVKVRAAGICGSDLHIREGG--PPPPPKFPLILGHEGVGVVVAVGPGVTDFKV------------------------ 55 (109)
T ss_dssp TEEEEEEEEEEE-HHHHHHHTTS--SSSTSSSSEES-SEEEEEEEEESTTTTSSGT------------------------
T ss_pred CEEEEEEEEeeeCHHHHHHHhhc--cccCCCCCcccccceeeeeeeeccccccccc------------------------
Confidence 56788899999988877664321 3445677888999999999999986555665
Q ss_pred HhcCcEEEEeecCCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcCceeecCCCcccccc
Q psy1413 169 MTKEIDIRGVFRYANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCDRVAIEPGVPCRTCT 248 (408)
Q Consensus 169 ~~~~~~l~g~~~~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~~v~~~~~~~~~~~~ 248 (408)
+|+|...+...|+.|.
T Consensus 56 ----------------------------------------------------------------Gd~V~~~~~~~~~~c~ 71 (109)
T PF08240_consen 56 ----------------------------------------------------------------GDRVVVSPNIGCGECE 71 (109)
T ss_dssp ----------------------------------------------------------------T-EEEEESEEETSSSH
T ss_pred ----------------------------------------------------------------cceeeeecccCccCch
Confidence 9999999988899999
Q ss_pred cccCCccccccceeecccCCCCccceeEEeeccceeeeC
Q psy1413 249 YCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHKL 287 (408)
Q Consensus 249 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~ 287 (408)
.|..+.+++|.+...++.. .+|+|++|+.++++.++++
T Consensus 72 ~c~~~~~~~c~~~~~~g~~-~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 72 YCLSGRPNLCPNPEVLGLG-LDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp HHHTTTGGGTTTBEETTTS-STCSSBSEEEEEGGGEEEE
T ss_pred hhcCCccccCCCCCEeEcC-CCCcccCeEEEehHHEEEC
Confidence 9999999999999988886 8999999999999999875
No 225
>KOG1196|consensus
Probab=98.75 E-value=2.9e-08 Score=88.90 Aligned_cols=185 Identities=16% Similarity=0.127 Sum_probs=117.4
Q ss_pred CccEEEEEeCCCCCCCCCCCEEEEccCcccccCCcceecccee---eecccccCCC---------CCCcceEEEEeeeee
Q psy1413 33 EASGIVSKVGAKVKHLKVDNQTRFVPEFRNVCLSPILRRRFSL---RFREQKPIED---------PDDHEVLLEMHCVGI 100 (408)
Q Consensus 33 E~~G~Vv~vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~p~~~---~~~~~~~lp~---------~~~~~~~~~~~~~~~ 100 (408)
.++|+|++ ++-+++++||.|.....+... .+. -+... ..+.....|. +..|++..-...+..
T Consensus 78 ~GV~kVi~--S~~~~~~~GD~v~g~~gWeey---sii-~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p 151 (343)
T KOG1196|consen 78 FGVAKVID--SGHPNYKKGDLVWGIVGWEEY---SVI-TPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP 151 (343)
T ss_pred CceEEEEe--cCCCCCCcCceEEEeccceEE---EEe-cCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC
Confidence 67899999 556889999999855433211 111 11111 1111111121 222332111111111
Q ss_pred -cCCeEEEEc-cCccccccccccccccCc-------------------------------------------ceeEEEcc
Q psy1413 101 -CGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------------------------------ASGIVSKV 135 (408)
Q Consensus 101 -~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------------------------------~~~vv~~~ 135 (408)
.|+++.|.+ +|.+|+.+.|+|+.+|+. .|--++++
T Consensus 152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV 231 (343)
T KOG1196|consen 152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV 231 (343)
T ss_pred CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence 478898876 899999999999998872 33345566
Q ss_pred CchH--HHHhhccCCcEEEEEccCC---CCcc--c-CHHHHHhcCcEEEEeecCC------CcHHHHHHHHHcCCCCCCC
Q psy1413 136 GAKV--KHLKATRPGGCLVIVGAGS---QDVK--I-PLVLTMTKEIDIRGVFRYA------NDYPIALAMVASGKVDVKK 201 (408)
Q Consensus 136 g~~~--~~~~~l~~gG~iv~~G~~~---~~~~--~-~~~~~~~~~~~l~g~~~~~------~~~~~~~~l~~~g~~~~~~ 201 (408)
|... ..+..++..|||+..|+-. .+.+ + +...++.|++++.|..... +.++.+..++++|||+..+
T Consensus 232 GG~~lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~e 311 (343)
T KOG1196|consen 232 GGKMLDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVE 311 (343)
T ss_pred CcHHHHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEeh
Confidence 6543 5688899999999999532 2222 2 2346789999999976432 3467788999999998654
Q ss_pred ceeeeeccchHHHHHHHHHcCCCC
Q psy1413 202 LITHNYLLEDTLHAFETAKTGAGN 225 (408)
Q Consensus 202 ~i~~~~~l~~~~~a~~~~~~~~~~ 225 (408)
-+.. .|+..++||.-|.++++.
T Consensus 312 di~~--Glen~P~A~vglf~GkNv 333 (343)
T KOG1196|consen 312 DIAD--GLENGPSALVGLFHGKNV 333 (343)
T ss_pred hHHH--HHhccHHHHHHHhccCcc
Confidence 3332 499999999999998764
No 226
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=98.65 E-value=5.5e-08 Score=93.26 Aligned_cols=228 Identities=15% Similarity=0.130 Sum_probs=147.4
Q ss_pred CCeeeecccchhhhhcCCCC-CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEc----cCcccccCCcceecccee
Q psy1413 1 MHCVGICGSDVHYLTHGQIG-DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFV----PEFRNVCLSPILRRRFSL 75 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~-~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~----~~~~~~~~~~~~~~p~~~ 75 (408)
|+++|||+.|....... .+ .+..++|.++|||++|+|+++|++|++|++||||... .++...+...++..|+.+
T Consensus 43 v~a~gin~~d~~~~~~~-~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~~~~iP~~~ 121 (345)
T cd08293 43 TLYLSVDPYMRCRMNED-TGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSSLEKVDPQL 121 (345)
T ss_pred EEEEecCHHHHhhcccc-cccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEecCCCceeEEEecHHHeEEcCccc
Confidence 57999999886432111 11 1223578899999999999999999999999999864 345566677788888875
Q ss_pred eecc----cccCCCCCCcceEEEEeeeeec-C--CeEEEEcc-CccccccccccccccC-c-------------------
Q psy1413 76 RFRE----QKPIEDPDDHEVLLEMHCVGIC-G--SDVHYLTH-GQIGDFRLSDPMIVGH-E------------------- 127 (408)
Q Consensus 76 ~~~~----~~~lp~~~~~~~~~~~~~~~~~-g--~~vlv~g~-G~vG~~~i~~a~~~G~-~------------------- 127 (408)
.+++ .+.++.++.+++.+......+. + ++++|+|+ |++|++++|+++.+|+ +
T Consensus 122 ~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lG 201 (345)
T cd08293 122 VDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELG 201 (345)
T ss_pred cccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcC
Confidence 4422 2233444444432211122232 3 78999985 9999999999887775 2
Q ss_pred -----------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCC---CCcc----cCH--HHH-HhcC
Q psy1413 128 -----------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGS---QDVK----IPL--VLT-MTKE 172 (408)
Q Consensus 128 -----------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~---~~~~----~~~--~~~-~~~~ 172 (408)
++.+++++|... +++++|+++|+++.+|... .+.. ++. ..+ ..++
T Consensus 202 a~~vi~~~~~~~~~~i~~~~~~gvd~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (345)
T cd08293 202 FDAAINYKTDNVAERLRELCPEGVDVYFDNVGGEISDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERN 281 (345)
T ss_pred CcEEEECCCCCHHHHHHHHCCCCceEEEECCCcHHHHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcc
Confidence 233444444322 5789999999999999532 1111 111 112 1234
Q ss_pred cEEEEeec--CC----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 173 IDIRGVFR--YA----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 173 ~~l~g~~~--~~----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+++.+... .. +.+++++++++++++++. +...++|+|+.+||+.+.+++ ..+|++++
T Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~--~~~~~~l~~~~~A~~~~~~~~-~~gkvvl~ 344 (345)
T cd08293 282 ITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVK--ETVYEGLENAGEAFQSMMNGG-NIGKQIVK 344 (345)
T ss_pred eEEEEEEeeccHhHHHHHHHHHHHHHHCCCccce--eEEeecHHHHHHHHHHHhcCC-CCCeEEEE
Confidence 44433321 11 236778899999999765 445579999999999998875 45677764
No 227
>cd08244 MDR_enoyl_red Possible enoyl reductase. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr
Probab=98.64 E-value=4.4e-08 Score=92.91 Aligned_cols=227 Identities=17% Similarity=0.195 Sum_probs=163.9
Q ss_pred CCeeeecccchhhhhcCCCC-CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc--------CcccccCCcceec
Q psy1413 1 MHCVGICGSDVHYLTHGQIG-DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP--------EFRNVCLSPILRR 71 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~-~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~--------~~~~~~~~~~~~~ 71 (408)
|.++|+|++|++.+. |..+ .+...+|.++|||++|+|+++|+++..+++||+|+... ++...+...++..
T Consensus 34 v~~~~i~~~d~~~~~-g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~l 112 (324)
T cd08244 34 VAAAGVHFVDTQLRS-GWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPV 112 (324)
T ss_pred EEEEeCCHHHHHHhC-CCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeC
Confidence 468999999998874 3221 12345678999999999999999999999999998754 3445666778888
Q ss_pred cceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc----------------------
Q psy1413 72 RFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE---------------------- 127 (408)
Q Consensus 72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~---------------------- 127 (408)
|+++.+.+.+.++..+.+++ .......+ .++.++|+| .|.+|++++++++.+|+.
T Consensus 113 p~~~~~~~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~~g~~~~ 191 (324)
T cd08244 113 PDGLDLEAAVAVVHDGRTAL-GLLDLATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVRALGADVA 191 (324)
T ss_pred CCCCCHHHHhhhcchHHHHH-HHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCCEE
Confidence 99888866666666555442 11111122 367899988 789999998888877753
Q ss_pred --------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC--
Q psy1413 128 --------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA-- 182 (408)
Q Consensus 128 --------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~-- 182 (408)
++.+++++|... ..+++++++|+++.+|.... +..++...++.+++++.+.....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (324)
T cd08244 192 VDYTRPDWPDQVREALGGGGVTVVLDGVGGAIGRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAE 271 (324)
T ss_pred EecCCccHHHHHHHHcCCCCceEEEECCChHhHHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCC
Confidence 333344443322 56889999999999997543 34566666778999988875432
Q ss_pred -----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 183 -----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 183 -----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+.++++++++.+++++. ++++.|+++++++|++.+.+++ ..+|+++.
T Consensus 272 ~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~-~~~kvv~~ 323 (324)
T cd08244 272 RGGLRALEARALAEAAAGRLVP--VVGQTFPLERAAEAHAALEARS-TVGKVLLL 323 (324)
T ss_pred HHHHHHHHHHHHHHHHCCCccC--ccceEEeHHHHHHHHHHHHcCC-CCceEEEe
Confidence 34777899999998763 4889999999999999988764 44565543
No 228
>cd05282 ETR_like 2-enoyl thioester reductase-like. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman
Probab=98.55 E-value=7.3e-08 Score=91.34 Aligned_cols=226 Identities=22% Similarity=0.273 Sum_probs=161.0
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~ 74 (408)
|+++++|++|++.+ .+.+. ....+|.++|||++|+|+++|++++.+++||+|+..+ ++...+...++..|++
T Consensus 33 v~~~~~~~~d~~~~-~~~~~-~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~lp~~ 110 (323)
T cd05282 33 MLAAPINPSDLITI-SGAYG-SRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGTWQEYVVAPADDLIPVPDS 110 (323)
T ss_pred EEeccCCHHHHHHh-cCcCC-CCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeCCCCcceeEEecCHHHeEECCCC
Confidence 46899999999987 33322 1235688999999999999999999999999999764 3445666677888888
Q ss_pred eeecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCc-------------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHE------------------------- 127 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~------------------------- 127 (408)
+.+.+.+.++....+++........ ..+++++|+| .|.+|++++++++.+|+.
T Consensus 111 ~~~~~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 190 (323)
T cd05282 111 ISDEQAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEELKALGADEVIDS 190 (323)
T ss_pred CCHHHHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHHHhcCCCEEecc
Confidence 8875555555444443322111111 2478899987 478999998888877763
Q ss_pred -----------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-----
Q psy1413 128 -----------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA----- 182 (408)
Q Consensus 128 -----------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~----- 182 (408)
++.+++++|... ..+++++++|+++.+|.... +..++...+..+++++.+.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (323)
T cd05282 191 SPEDLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSA 270 (323)
T ss_pred cchhHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccC
Confidence 233334333321 56889999999999997654 35566666666899998876432
Q ss_pred ------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 183 ------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 183 ------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
..++++++++.++++.+ .+++.|+++++.+||+.+..+. ...|+++
T Consensus 271 ~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~a~~~~~~~~-~~~kvv~ 322 (323)
T cd05282 271 TKEAKQETFAEVIKLVEAGVLTT--PVGAKFPLEDFEEAVAAAEQPG-RGGKVLL 322 (323)
T ss_pred CHHHHHHHHHHHHHHHhCCCccc--CccceecHHHHHHHHHHHhcCC-CCceEee
Confidence 23777899999998864 3789999999999999998764 3345553
No 229
>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family. This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.
Probab=98.55 E-value=1.3e-07 Score=89.70 Aligned_cols=224 Identities=17% Similarity=0.223 Sum_probs=153.6
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI 68 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~ 68 (408)
|+++++|++|++.+. |.++ ....+|.++|||++|+|++ +++.+|++||||+..+ ++...+...+
T Consensus 33 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~ 108 (323)
T TIGR02823 33 VAYSSLNYKDALAIT-GKGG-VVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWL 108 (323)
T ss_pred EEEEEcCHHHHHHHc-CCCC-CCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhhe
Confidence 468999999999884 3322 1235688999999999998 6678899999998653 3345666677
Q ss_pred eeccceeeecccccCCCCCCcceEEE--Eeee-eecCC-eEEEEcc-CccccccccccccccCcc---------------
Q psy1413 69 LRRRFSLRFREQKPIEDPDDHEVLLE--MHCV-GICGS-DVHYLTH-GQIGDFRLSDPMIVGHEA--------------- 128 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~~~~~~~~--~~~~-~~~g~-~vlv~g~-G~vG~~~i~~a~~~G~~~--------------- 128 (408)
+..|+++++.+.+.++....+++.+. +... ...++ +++|+|+ |.+|++++++++.+|+..
T Consensus 109 ~~iP~~~~~~~aa~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~~ 188 (323)
T TIGR02823 109 VPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLKE 188 (323)
T ss_pred EECCCCCCHHHhhhhhhhHHHHHHHHHHhhhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHh
Confidence 88888888755555554433332111 1111 12466 8999985 999999998888777632
Q ss_pred ------------------------eeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecC
Q psy1413 129 ------------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRY 181 (408)
Q Consensus 129 ------------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~ 181 (408)
+.+++++|... +.+++++++|+++.+|.... ...++...++.+++++.+....
T Consensus 189 ~g~~~~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (323)
T TIGR02823 189 LGASEVIDREDLSPPGKPLEKERWAGAVDTVGGHTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSV 268 (323)
T ss_pred cCCcEEEccccHHHHHHHhcCCCceEEEECccHHHHHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEecc
Confidence 23334333221 56889999999999997643 3445556677899999986533
Q ss_pred --C-C----cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 182 --A-N----DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 182 --~-~----~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
. + .++.+.+++..++++. +.+.|+++++++||+.+.+++ ..+|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~l~~~~~a~~~~~~~~-~~~k~vv~ 322 (323)
T TIGR02823 269 YCPMALREAAWQRLATDLKPRNLES---ITREITLEELPEALEQILAGQ-HRGRTVVD 322 (323)
T ss_pred ccCchhHHHHHHHHHHHhhcCCCcC---ceeeecHHHHHHHHHHHhCCC-ccceEEEe
Confidence 1 2 2455666676777653 256899999999999998765 35566553
No 230
>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional
Probab=98.49 E-value=5.6e-08 Score=92.45 Aligned_cols=228 Identities=21% Similarity=0.224 Sum_probs=153.5
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCcceeccc
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILRRRF 73 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~~p~ 73 (408)
|.++|+|++|++... +.++ ...+|.++|||++|+|+.+|++|+.+++||+|+... ++.......++..|+
T Consensus 35 v~~~gi~~~d~~~~~-g~~~--~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~lp~ 111 (327)
T PRK10754 35 NKAIGINYIDTYIRS-GLYP--PPSLPSGLGTEAAGVVSKVGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAILPD 111 (327)
T ss_pred EEEEEcCHHHhhhcC-CCCC--CCCCCCccCcceEEEEEEeCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeCCC
Confidence 468999999998873 3322 234688999999999999999999999999997532 334555667778888
Q ss_pred eeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc------------------------
Q psy1413 74 SLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE------------------------ 127 (408)
Q Consensus 74 ~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~------------------------ 127 (408)
++++++.+.++....+++........+ .+++++|.| .|.+|++++++++.+|++
T Consensus 112 ~~~~~~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~~~g~~~~~~ 191 (327)
T PRK10754 112 AISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKAGAWQVIN 191 (327)
T ss_pred CCCHHHHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHCCCCEEEc
Confidence 888755554444433333221111112 478888886 789999998888887763
Q ss_pred ------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-cccCHHHHHhcCc------EEEEeec
Q psy1413 128 ------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-VKIPLVLTMTKEI------DIRGVFR 180 (408)
Q Consensus 128 ------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~~~~~~~~~~~~~------~l~g~~~ 180 (408)
.+.++++++... +.+++++++|+++.+|..... ..++...+..++. .+.+.+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (327)
T PRK10754 192 YREENIVERVKEITGGKKVRVVYDSVGKDTWEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYIT 271 (327)
T ss_pred CCCCcHHHHHHHHcCCCCeEEEEECCcHHHHHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccC
Confidence 223333333221 568899999999999966532 2344433333322 2222222
Q ss_pred CCC----cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 181 YAN----DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 181 ~~~----~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
..+ .+.++++++.++++++..++.++|+++++.++++.+.++. ...|+++.
T Consensus 272 ~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~~~~~ 326 (327)
T PRK10754 272 TREELTEASNELFSLIASGVIKVDVAEQQKFPLKDAQRAHEILESRA-TQGSSLLI 326 (327)
T ss_pred CHHHHHHHHHHHHHHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCC-CcceEEEe
Confidence 212 2456899999999987777889999999999999988765 44666653
No 231
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=98.48 E-value=7.2e-07 Score=88.45 Aligned_cols=87 Identities=26% Similarity=0.290 Sum_probs=66.4
Q ss_pred cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE-EecCCCCC---------hHHHHHHHHH
Q psy1413 314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT-VLIDRNHS---------LEEISTHIIE 383 (408)
Q Consensus 314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~-i~~~~~~~---------~~~~~~~~~~ 383 (408)
..++++++|+|+|++|+.+++.|+.+|++ |+++++++++++.++++|++.+ ++..+... .++..+..++
T Consensus 162 ~~pg~kVlViGaG~iGL~Ai~~Ak~lGA~-V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~ 240 (509)
T PRK09424 162 KVPPAKVLVIGAGVAGLAAIGAAGSLGAI-VRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMA 240 (509)
T ss_pred CcCCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHH
Confidence 56799999999999999999999999995 9999999999999999999954 66533110 0133333333
Q ss_pred H-hc-CCCCceEEEcccchh
Q psy1413 384 L-LQ-GEQPDKTIDCSGIES 401 (408)
Q Consensus 384 ~-~~-~~~~d~i~d~~g~~~ 401 (408)
. +. .+++|++|+|+|.+.
T Consensus 241 ~~~~~~~gaDVVIetag~pg 260 (509)
T PRK09424 241 LFAEQAKEVDIIITTALIPG 260 (509)
T ss_pred HHHhccCCCCEEEECCCCCc
Confidence 3 22 257999999999754
No 232
>cd08290 ETR 2-enoyl thioester reductase (ETR). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f
Probab=98.48 E-value=1.3e-07 Score=90.39 Aligned_cols=228 Identities=21% Similarity=0.227 Sum_probs=162.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCC---CCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-------CcccccCCccee
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRL---SDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-------EFRNVCLSPILR 70 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~---~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-------~~~~~~~~~~~~ 70 (408)
+.++|+|++|++.+. |..+.... .+|.++|||++|+|+++|+++..+++||+|+... ++...+...++.
T Consensus 36 v~~~gi~~~d~~~~~-g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~ 114 (341)
T cd08290 36 MLAAPINPADINQIQ-GVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIK 114 (341)
T ss_pred EEecCCCHHHHHHhc-CcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEe
Confidence 468999999999874 33221111 1678999999999999999999999999999754 445666678888
Q ss_pred ccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCcc--------------------
Q psy1413 71 RRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHEA-------------------- 128 (408)
Q Consensus 71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~~-------------------- 128 (408)
.|+++++++.+.++....+++.+......+ .+++++|+| .|++|++++++++.+|...
T Consensus 115 lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~ 194 (341)
T cd08290 115 VPNDVDPEQAATLSVNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKAL 194 (341)
T ss_pred CCCCCCHHHHHHhhccHHHHHHHHHhhcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHHhc
Confidence 899888866666666555554322111122 478899987 5899999988888777642
Q ss_pred ----------------------------eeEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEE
Q psy1413 129 ----------------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRG 177 (408)
Q Consensus 129 ----------------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g 177 (408)
+.+++++|... ..+++++++|+++.+|... .+..++...++.++.++.+
T Consensus 195 g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 274 (341)
T cd08290 195 GADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRG 274 (341)
T ss_pred CCCEEEeCcccccccHHHHHHHHcCCCceEEEECcCcHhHHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEE
Confidence 22333333221 4678899999999999643 3455666667889999998
Q ss_pred eecCC-----------CcHHHHHHHHHcCCCCCCCceeeee---ccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 178 VFRYA-----------NDYPIALAMVASGKVDVKKLITHNY---LLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 178 ~~~~~-----------~~~~~~~~l~~~g~~~~~~~i~~~~---~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
..... ..++++++++.++++.+. ..+.+ +++++.++++.+.++. ...|++++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~~~~a~~~~~~~~-~~~k~v~~ 340 (341)
T cd08290 275 FWLTRWLKRANPEEKEDMLEELAELIREGKLKAP--PVEKVTDDPLEEFKDALANALKGG-GGGKQVLV 340 (341)
T ss_pred EecHHHHhhcCHHHHHHHHHHHHHHHHcCCccCC--cccccccCCHHHHHHHHHHHhhcC-CCCeEEEe
Confidence 76432 147889999999998754 44455 9999999999998764 44566553
No 233
>PTZ00354 alcohol dehydrogenase; Provisional
Probab=98.47 E-value=1.3e-07 Score=90.02 Aligned_cols=229 Identities=17% Similarity=0.168 Sum_probs=160.6
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~ 74 (408)
|.++|+|++|+..+. +... .....|.++|||++|+|+++|++++.+++||+|+... ++...+...++..|++
T Consensus 35 v~~~~i~~~d~~~~~-~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~ip~~ 112 (334)
T PTZ00354 35 VSAAGVNRADTLQRQ-GKYP-PPPGSSEILGLEVAGYVEDVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIPQG 112 (334)
T ss_pred EEEEecCHHHHHHhC-CCCC-CCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeCCCC
Confidence 468999999998874 3221 1234467899999999999999999999999998652 3345666677888888
Q ss_pred eeecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCcc------------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHEA------------------------ 128 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~~------------------------ 128 (408)
+++.+.+.++.+..+++.+...... ..+++++|+| +|.+|++++++++.+|+..
T Consensus 113 ~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 192 (334)
T PTZ00354 113 YTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFCKKLAAIILIRY 192 (334)
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 8875555555554444422111111 2478899988 6899999988888777631
Q ss_pred -------------------eeEEEccCch--HHHHhhccCCcEEEEEccCCC-Ccc-cCHHHHHhcCcEEEEeecCC-C-
Q psy1413 129 -------------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQ-DVK-IPLVLTMTKEIDIRGVFRYA-N- 183 (408)
Q Consensus 129 -------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~-~~~-~~~~~~~~~~~~l~g~~~~~-~- 183 (408)
+.++++++.. ...+++++++|+++.+|.... ... ++...++.++.++.++.... .
T Consensus 193 ~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 272 (334)
T PTZ00354 193 PDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSD 272 (334)
T ss_pred CChhHHHHHHHHHhCCCCceEEEECCchHHHHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccch
Confidence 1222222211 146888999999999996543 333 66677778888888865432 1
Q ss_pred ---------cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEEcC
Q psy1413 184 ---------DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIHCD 234 (408)
Q Consensus 184 ---------~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~~~ 234 (408)
.+++++++++++.+++ ++.+.+++++++++++.+.+++. .+|+++++.
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~-~~kvvv~~~ 329 (334)
T PTZ00354 273 EYKADLVASFEREVLPYMEEGEIKP--IVDRTYPLEEVAEAHTFLEQNKN-IGKVVLTVN 329 (334)
T ss_pred hhhHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHhCCC-CceEEEecC
Confidence 1467888999988764 47889999999999999987653 467877654
No 234
>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases. yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH
Probab=98.46 E-value=1.6e-07 Score=89.29 Aligned_cols=226 Identities=16% Similarity=0.177 Sum_probs=151.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI 68 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~ 68 (408)
+.++|+|++|++..... +.....+|.++|||++|+|++. ++.++++||||+..+ ++...+...+
T Consensus 34 v~~~~i~~~d~~~~~~~--~~~~~~~~~~~g~e~~G~V~~~--~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~ 109 (326)
T cd08289 34 VAYSSVNYKDGLASIPG--GKIVKRYPFIPGIDLAGTVVES--NDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWV 109 (326)
T ss_pred EEEEecChHHhhhhcCC--ccccCCCCcCcccceeEEEEEc--CCCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHe
Confidence 46899999998765311 1223356899999999999995 457899999998753 3345556677
Q ss_pred eeccceeeecccccCCCCCCcceEEEE--eeee-e-cCCeEEEEcc-CccccccccccccccCc----------------
Q psy1413 69 LRRRFSLRFREQKPIEDPDDHEVLLEM--HCVG-I-CGSDVHYLTH-GQIGDFRLSDPMIVGHE---------------- 127 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~--~~~~-~-~g~~vlv~g~-G~vG~~~i~~a~~~G~~---------------- 127 (408)
+..|+++++.+.+.++....+++.+.. .... . .+++++|+|+ |.+|++++++|+.+|+.
T Consensus 110 ~~~p~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~ 189 (326)
T cd08289 110 VPLPKGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLKK 189 (326)
T ss_pred EECCCCCCHHHHhhhhhHHHHHHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHHH
Confidence 778888887555555544433332110 1111 1 3578999985 99999999888877752
Q ss_pred ------------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeec
Q psy1413 128 ------------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFR 180 (408)
Q Consensus 128 ------------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~ 180 (408)
++.+++++|... +.+++++++|+++.+|.... ..+++...++.+++++.+...
T Consensus 190 ~g~~~v~~~~~~~~~~~~~~~~~~~d~vld~~g~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (326)
T cd08289 190 LGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKTLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDS 269 (326)
T ss_pred cCCCEEEcchhHHHHHHHhhccCCcCEEEECCcHHHHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEe
Confidence 233444444321 56889999999999997643 345556677799999999753
Q ss_pred C---CCcHHHHHHHHHcCCCC---CCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 181 Y---ANDYPIALAMVASGKVD---VKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 181 ~---~~~~~~~~~l~~~g~~~---~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
. ......+++.+.+ .+. ....++++|+++++.+||+.+.+++. .+|++++
T Consensus 270 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~-~gkvvv~ 325 (326)
T cd08289 270 VECPMELRRRIWRRLAT-DLKPTQLLNEIKQEITLDELPEALKQILQGRV-TGRTVVK 325 (326)
T ss_pred EecCchHHHHHHHHHHh-hcCccccccccceEeeHHHHHHHHHHHhcCcc-cceEEEe
Confidence 2 1234444444443 222 23356999999999999999987754 4556543
No 235
>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1.1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....
Probab=98.40 E-value=2.8e-07 Score=75.16 Aligned_cols=68 Identities=32% Similarity=0.508 Sum_probs=61.2
Q ss_pred cceeEEEccCchH---HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecCC-CcHHHHHHHHHc
Q psy1413 127 EASGIVSKVGAKV---KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRYA-NDYPIALAMVAS 194 (408)
Q Consensus 127 ~~~~vv~~~g~~~---~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~~-~~~~~~~~l~~~ 194 (408)
.++.+++++|... .++++++++|+++.+|.+. .+.+++...++++++++.|++.++ ++++++++++++
T Consensus 58 ~~d~vid~~g~~~~~~~~~~~l~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~ 130 (130)
T PF00107_consen 58 GVDVVIDCVGSGDTLQEAIKLLRPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ 130 (130)
T ss_dssp SEEEEEESSSSHHHHHHHHHHEEEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred cceEEEEecCcHHHHHHHHHHhccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence 5888999999554 7899999999999999988 789999999999999999999998 899999999864
No 236
>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR). NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.
Probab=98.39 E-value=3e-07 Score=86.84 Aligned_cols=222 Identities=15% Similarity=0.196 Sum_probs=153.8
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI 68 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~ 68 (408)
+++++||++|++.+. +..+ ...+|.++|||++|+|+++|+ ..+++||+|+... ++...+...+
T Consensus 34 v~~~~i~~~d~~~~~-~~~~--~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~ 108 (320)
T cd08243 34 VKAFGLNRSEIFTRQ-GHSP--SVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQV 108 (320)
T ss_pred EEEEecCHHHHHHhc-CCCC--CCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHc
Confidence 468999999999874 3221 235688999999999999995 5799999998653 2334555567
Q ss_pred eeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEcc-CccccccccccccccCcc------------------
Q psy1413 69 LRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTH-GQIGDFRLSDPMIVGHEA------------------ 128 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~-G~vG~~~i~~a~~~G~~~------------------ 128 (408)
+..|+++++++.+.++.++.+++.+...... ..+++++|+|+ |.+|++++++++.+|+..
T Consensus 109 ~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~ 188 (320)
T cd08243 109 YAIDSDLSWAELAALPETYYTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLKELGA 188 (320)
T ss_pred EeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCCCCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhcCC
Confidence 7888888876666666666555532211121 24789999984 899999999888777642
Q ss_pred ---------------------eeEEEccCch--HHHHhhccCCcEEEEEccCCCCcc---cCHHHHH--hcCcEEEEeec
Q psy1413 129 ---------------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQDVK---IPLVLTM--TKEIDIRGVFR 180 (408)
Q Consensus 129 ---------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~~~~---~~~~~~~--~~~~~l~g~~~ 180 (408)
+.+++++|.. .+.+++++++|+++.+|....... ....... .+++++.+...
T Consensus 189 ~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd08243 189 DEVVIDDGAIAEQLRAAPGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSS 268 (320)
T ss_pred cEEEecCccHHHHHHHhCCCceEEEECCChHHHHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecch
Confidence 2223333321 156889999999999997543222 2222222 67777777654
Q ss_pred CC---CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413 181 YA---NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM 230 (408)
Q Consensus 181 ~~---~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv 230 (408)
.. ..+++++++++++.+++ ++++.|+++++++|++.+.+++. .+|++
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~l~~~~~a~~~~~~~~~-~~kvv 318 (320)
T cd08243 269 GDVPQTPLQELFDFVAAGHLDI--PPSKVFTFDEIVEAHAYMESNRA-FGKVV 318 (320)
T ss_pred hhhhHHHHHHHHHHHHCCceec--ccccEEcHHHHHHHHHHHHhCCC-CCcEE
Confidence 33 35788999999998864 37788999999999999987643 33443
No 237
>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein. Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.
Probab=98.38 E-value=2.5e-07 Score=88.26 Aligned_cols=223 Identities=17% Similarity=0.231 Sum_probs=155.4
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR 71 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~ 71 (408)
|+++++|++|++.+. +.. ....+|.++|||++|+|+++|++|+.|++||+|+... ++...+...++..
T Consensus 36 v~~~~i~~~d~~~~~-g~~--~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i 112 (336)
T TIGR02817 36 VKAISVNPVDTKVRA-RMA--PEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHK 112 (336)
T ss_pred EEEEEcChHHHHHHc-CCC--CCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccC
Confidence 468999999999874 432 1235688999999999999999999999999998642 3445666677888
Q ss_pred cceeeecccccCCCCCCcceEEEEeeeeec------CCeEEEEc-cCccccccccccccc-cCc----------------
Q psy1413 72 RFSLRFREQKPIEDPDDHEVLLEMHCVGIC------GSDVHYLT-HGQIGDFRLSDPMIV-GHE---------------- 127 (408)
Q Consensus 72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~~------g~~vlv~g-~G~vG~~~i~~a~~~-G~~---------------- 127 (408)
|+++++++.+.++....+++.+......+. +++++|+| +|++|++++++++.+ |+.
T Consensus 113 p~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~~ 192 (336)
T TIGR02817 113 PKSLSFAEAAALPLTSITAWELLFDRLGINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVLE 192 (336)
T ss_pred CCCCCHHHHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHHH
Confidence 999988667777766665543321222222 78899988 689999999999887 753
Q ss_pred ------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeec
Q psy1413 128 ------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFR 180 (408)
Q Consensus 128 ------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~ 180 (408)
++.++++++.. ...+++++++|+++.++.. ..++...+..+++++.+...
T Consensus 193 ~g~~~~~~~~~~~~~~i~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~---~~~~~~~~~~~~~~~~~~~~ 269 (336)
T TIGR02817 193 LGAHHVIDHSKPLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDP---AELDISPFKRKSISLHWEFM 269 (336)
T ss_pred cCCCEEEECCCCHHHHHHHhcCCCCCEEEEcCCcHHHHHHHHHHhccCCEEEEEccc---ccccchhhhhcceEEEEEEe
Confidence 12233333221 2578999999999988532 34455555566666664321
Q ss_pred C------C-------CcHHHHHHHHHcCCCCCCCceeeee---ccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 181 Y------A-------NDYPIALAMVASGKVDVKKLITHNY---LLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 181 ~------~-------~~~~~~~~l~~~g~~~~~~~i~~~~---~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
. . ..++++++++.++++++ ++++.+ +++++++||+.+.+++. .+|+++.
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~--~~~~~~~~~~~~~~~~a~~~~~~~~~-~gkvvv~ 334 (336)
T TIGR02817 270 FTRSMFQTADMIEQHHLLNRVARLVDAGKIRT--TLAETFGTINAANLKRAHALIESGKA-RGKIVLE 334 (336)
T ss_pred ecccccchhhhhhhHHHHHHHHHHHHCCCeec--cchhccCCCCHHHHHHHHHHHHcCCc-cceEEEe
Confidence 1 0 23688999999998864 344555 47999999999998754 4566654
No 238
>cd08249 enoyl_reductase_like enoyl_reductase_like. Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de
Probab=98.36 E-value=6.4e-07 Score=85.77 Aligned_cols=227 Identities=16% Similarity=0.134 Sum_probs=152.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc--------------CcccccCC
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP--------------EFRNVCLS 66 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~--------------~~~~~~~~ 66 (408)
|+++|||++|++.+..+. ...+|.++|||++|+|+.+|++++.+++||+|+... ++...+..
T Consensus 33 v~~~~i~~~d~~~~~~~~----~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~ 108 (339)
T cd08249 33 VKAVALNPVDWKHQDYGF----IPSYPAILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADAD 108 (339)
T ss_pred EEEEEcCchheeeeeccc----ccCCCceeeeeeeEEEEEeCCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechh
Confidence 468999999999874221 124578899999999999999999999999998754 33345556
Q ss_pred cceeccceeeecccccCCCCCCcceEEEEeeee-----------ecCCeEEEEc-cCccccccccccccccCc-------
Q psy1413 67 PILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-----------ICGSDVHYLT-HGQIGDFRLSDPMIVGHE------- 127 (408)
Q Consensus 67 ~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-----------~~g~~vlv~g-~G~vG~~~i~~a~~~G~~------- 127 (408)
.++..|+++++++.+.++.++.+++........ ..+++++|+| .|.+|++++++++.+|+.
T Consensus 109 ~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~~~ 188 (339)
T cd08249 109 LTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTASP 188 (339)
T ss_pred heEECCCCCCHHHceecchHHHHHHHHHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEECc
Confidence 777888888886666666665555432211111 2478899998 489999998888877753
Q ss_pred ---------------------------------ceeEEEccCc-h--HHHHhhccC--CcEEEEEccCCCCcccCHHHHH
Q psy1413 128 ---------------------------------ASGIVSKVGA-K--VKHLKATRP--GGCLVIVGAGSQDVKIPLVLTM 169 (408)
Q Consensus 128 ---------------------------------~~~vv~~~g~-~--~~~~~~l~~--gG~iv~~G~~~~~~~~~~~~~~ 169 (408)
++.+++++|. . .++++++++ +|+++.+|.......+. ....
T Consensus 189 ~~~~~~~~~g~~~v~~~~~~~~~~~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~-~~~~ 267 (339)
T cd08249 189 KNFDLVKSLGADAVFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPR-KGVK 267 (339)
T ss_pred ccHHHHHhcCCCEEEECCCchHHHHHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCC-CCce
Confidence 2344444443 1 257889999 99999999765432111 1111
Q ss_pred hcCcEEEEeec-----C---CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 170 TKEIDIRGVFR-----Y---ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 170 ~~~~~l~g~~~-----~---~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
.+......... . ...+++++++++++++.+.++.+..++++++++||+.+..++....|++++
T Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~ 338 (339)
T cd08249 268 VKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVR 338 (339)
T ss_pred EEEEEeeeecccccccccchHHHHHHHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEe
Confidence 11111111111 1 134778999999999987644443344999999999999876456777764
No 239
>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members. Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=98.34 E-value=4.6e-07 Score=86.21 Aligned_cols=225 Identities=21% Similarity=0.240 Sum_probs=158.1
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----CcccccCCcceecccee
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----EFRNVCLSPILRRRFSL 75 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----~~~~~~~~~~~~~p~~~ 75 (408)
|.++|||++|++.. .|.+. ....+|.++|||++|+|+++|+++..+++||+|.... ++...+...++..|+.
T Consensus 37 v~~~gi~~~d~~~~-~g~~~-~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~~~~ip~~- 113 (329)
T cd08250 37 NRFVGINASDINFT-AGRYD-PGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAVATMSFGAFAEYQVVPARHAVPVPEL- 113 (329)
T ss_pred EEEEecCHHHHHHH-hCCCC-CCCCCCcccCceeEEEEEEECCCCCCCCCCCEEEEecCcceeEEEEechHHeEECCCC-
Confidence 46899999999987 44321 1246789999999999999999999999999998642 3445666677777775
Q ss_pred eecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCc--------------------------
Q psy1413 76 RFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------------- 127 (408)
Q Consensus 76 ~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------------- 127 (408)
+++.+.++..+.+++.+...... ..+++++|+| +|.+|++++++++..|++
T Consensus 114 -~~~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~v~~~~ 192 (329)
T cd08250 114 -KPEVLPLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKSLGCDRPINYK 192 (329)
T ss_pred -cchhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHHHcCCceEEeCC
Confidence 23445555555444432211112 2478899988 689999988888877753
Q ss_pred ---------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-----------cccCHHHHHhcCcEEEEee
Q psy1413 128 ---------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-----------VKIPLVLTMTKEIDIRGVF 179 (408)
Q Consensus 128 ---------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-----------~~~~~~~~~~~~~~l~g~~ 179 (408)
++.+++++|... +.+++++++|+++.+|..... ..++ ...+.+++++.+..
T Consensus 193 ~~~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 271 (329)
T cd08250 193 TEDLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLP-PKLLAKSASVRGFF 271 (329)
T ss_pred CccHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHhccCCeEEEEecccCCcccCccccccccccc-HHHhhcCceEEEEE
Confidence 223344443221 568899999999999965421 1222 24567888988875
Q ss_pred cC------CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 180 RY------ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 180 ~~------~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
.. .+.+.+++++++++.+++.....+.|+++++++||+.+.+++ ...|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~kvvv 328 (329)
T cd08250 272 LPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGK-NIGKVVV 328 (329)
T ss_pred hHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCC-CCceEEe
Confidence 43 245788999999999887555677899999999999999764 3456654
No 240
>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A.
Probab=98.31 E-value=9.7e-07 Score=71.64 Aligned_cols=98 Identities=24% Similarity=0.340 Sum_probs=62.1
Q ss_pred cCcceeEEEccC--chH---HHHhhccCCcEEEEEccCCCCcccCHHHHHhc--CcEEEEeec---C--C-CcHHHHHHH
Q psy1413 125 GHEASGIVSKVG--AKV---KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTK--EIDIRGVFR---Y--A-NDYPIALAM 191 (408)
Q Consensus 125 G~~~~~vv~~~g--~~~---~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~--~~~l~g~~~---~--~-~~~~~~~~l 191 (408)
+..++.+++++| ... .+.++| ++|+++.+|. .+.......+ .++...... . . +.+++++++
T Consensus 17 ~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~l 90 (127)
T PF13602_consen 17 PGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-----DLPSFARRLKGRSIRYSFLFSVDPNAIRAEALEELAEL 90 (127)
T ss_dssp TS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-----HHHHHHHHHHCHHCEEECCC-H--HHHHHHHHHHHHHH
T ss_pred CCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-----cccchhhhhcccceEEEEEEecCCCchHHHHHHHHHHH
Confidence 456788999999 331 345667 9999999984 2122222222 333333321 1 2 459999999
Q ss_pred HHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 192 VASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 192 ~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
+++|++++ .+.++|||+|+.+|++.+++++.. +|+|+
T Consensus 91 ~~~G~l~~--~i~~~f~l~~~~~A~~~l~~~~~~-GKvVl 127 (127)
T PF13602_consen 91 VAEGKLKP--PIDRVFPLEEAPEAHERLESGHAR-GKVVL 127 (127)
T ss_dssp HHTTSS-----EEEEEEGGGHHHHHHHHHCT--S-SEEEE
T ss_pred HHCCCeEE--eeccEECHHHHHHHHHHHHhCCCC-CeEeC
Confidence 99999865 589999999999999999998765 66654
No 241
>cd08252 AL_MDR Arginate lyase and other MDR family members. This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil
Probab=98.26 E-value=6.5e-07 Score=85.41 Aligned_cols=225 Identities=17% Similarity=0.196 Sum_probs=153.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR 71 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~ 71 (408)
+.++|+|++|++.+. +..+ ..++|.++|||++|+|+++|+++..+++||+|.... ++...+...++..
T Consensus 37 v~~~~i~~~d~~~~~-~~~~--~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i 113 (336)
T cd08252 37 VEAVSVNPVDTKVRA-GGAP--VPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHK 113 (336)
T ss_pred EEEEEcCHHHHHHHc-CCCC--CCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeC
Confidence 358999999999874 3222 234677899999999999999999999999998752 2334555567777
Q ss_pred cceeeecccccCCCCCCcceEEEEeeeee-c-----CCeEEEEc-cCcccccccccccccc-Cc----------------
Q psy1413 72 RFSLRFREQKPIEDPDDHEVLLEMHCVGI-C-----GSDVHYLT-HGQIGDFRLSDPMIVG-HE---------------- 127 (408)
Q Consensus 72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~-----g~~vlv~g-~G~vG~~~i~~a~~~G-~~---------------- 127 (408)
|+++++++.+.++....+++........+ . +++++|+| .|++|++++++++.+| ..
T Consensus 114 p~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~~ 193 (336)
T cd08252 114 PKSLSFAEAAALPLTSLTAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVKE 193 (336)
T ss_pred CCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCCcCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHHh
Confidence 88777755555554444443221111222 2 68899988 6899999999888888 42
Q ss_pred ------------------------ceeEEEccCch---HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeec
Q psy1413 128 ------------------------ASGIVSKVGAK---VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFR 180 (408)
Q Consensus 128 ------------------------~~~vv~~~g~~---~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~ 180 (408)
++.+++++|.. ..++++++++|+++.+|... ..++...+..++.++.+...
T Consensus 194 ~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~--~~~~~~~~~~~~~~~~~~~~ 271 (336)
T cd08252 194 LGADHVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIAPQGHICLIVDPQ--EPLDLGPLKSKSASFHWEFM 271 (336)
T ss_pred cCCcEEEeCCccHHHHHHhhCCCCCCEEEEccCcHHHHHHHHHHhcCCCEEEEecCCC--CcccchhhhcccceEEEEEe
Confidence 22334444321 25688999999999999653 34455555678888876432
Q ss_pred C------C-------CcHHHHHHHHHcCCCCCCCc-eeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 181 Y------A-------NDYPIALAMVASGKVDVKKL-ITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 181 ~------~-------~~~~~~~~l~~~g~~~~~~~-i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
. . ..++++++++.++.+++... ..+.++++++++||+.+.+++ ...|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~-~~~~vv~ 335 (336)
T cd08252 272 FTRSMFQTPDMIEQHEILNEVADLLDAGKLKTTLTETLGPINAENLREAHALLESGK-TIGKIVL 335 (336)
T ss_pred eccccccccchhhHHHHHHHHHHHHHCCCEecceeeeecCCCHHHHHHHHHHHHcCC-ccceEEe
Confidence 1 1 22678999999998875321 234589999999999999765 3445543
No 242
>cd05286 QOR2 Quinone oxidoreductase (QOR). Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone
Probab=98.25 E-value=1.4e-06 Score=82.03 Aligned_cols=224 Identities=21% Similarity=0.257 Sum_probs=154.4
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~ 74 (408)
|.++|+|++|++... +. .+..+|.++|||++|+|+.+|+++.++++||+|.... ++.......++..|++
T Consensus 33 v~~~~i~~~d~~~~~-~~---~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~p~~ 108 (320)
T cd05286 33 NTAIGVNFIDTYFRS-GL---YPLPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLPDG 108 (320)
T ss_pred EEEeecCHHHHHHhc-CC---CCCCCCccCCcceeEEEEEECCCCCCCCCCCEEEEecCCCceeEEEEecHHHceeCCCC
Confidence 457899999999874 32 2235688999999999999999999999999998753 2334555667777887
Q ss_pred eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc-------------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE------------------------- 127 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~------------------------- 127 (408)
+++.+.+.++....+++........+ .+++++|+| .|++|++++++++.+|+.
T Consensus 109 ~~~~~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 188 (320)
T cd05286 109 ISDETAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAAGADHVINY 188 (320)
T ss_pred CCHHHHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHCCCCEEEeC
Confidence 77755554554444333221111222 478899998 689999988888877763
Q ss_pred -----------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-cccCHHHHHhcCcEEEEeec----CC-
Q psy1413 128 -----------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-VKIPLVLTMTKEIDIRGVFR----YA- 182 (408)
Q Consensus 128 -----------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-~~~~~~~~~~~~~~l~g~~~----~~- 182 (408)
++.++++++... ..+++++++|+++.+|..... ..++...+..+++++.+... ..
T Consensus 189 ~~~~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (320)
T cd05286 189 RDEDFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATR 268 (320)
T ss_pred CchhHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCH
Confidence 223333333211 468899999999999975543 33455555578888865421 11
Q ss_pred ----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 183 ----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 183 ----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
..+.++++++.++.+.+. +++.|++++++++|+.+.++.. ..|+++
T Consensus 269 ~~~~~~~~~~~~~~~~~~l~~~--~~~~~~~~~~~~a~~~~~~~~~-~~~vv~ 318 (320)
T cd05286 269 EELLARAAELFDAVASGKLKVE--IGKRYPLADAAQAHRDLESRKT-TGKLLL 318 (320)
T ss_pred HHHHHHHHHHHHHHHCCCCcCc--ccceEcHHHHHHHHHHHHcCCC-CceEEE
Confidence 224678889999887643 7789999999999999987653 345554
No 243
>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases. Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal
Probab=98.20 E-value=2.3e-06 Score=81.12 Aligned_cols=223 Identities=17% Similarity=0.216 Sum_probs=152.0
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------------CcccccCCcc
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------------EFRNVCLSPI 68 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------------~~~~~~~~~~ 68 (408)
|.++++|++|++.+ .+.+. ....+|.++|||++|+|++ ++++.+++||+|.... ++...+...+
T Consensus 34 v~~~~i~~~d~~~~-~g~~~-~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~ 109 (324)
T cd08288 34 VHYSTLNYKDGLAI-TGKGG-IVRTFPLVPGIDLAGTVVE--SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWL 109 (324)
T ss_pred EEEEecCHHHHHHh-cCCcc-ccCCCCCccccceEEEEEe--CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHe
Confidence 46899999999987 33321 1234688899999999999 7888899999998742 3335555677
Q ss_pred eeccceeeecccccCCCCCCcceEEE--Eeeeee--cCCeEEEEcc-CccccccccccccccCcce--------------
Q psy1413 69 LRRRFSLRFREQKPIEDPDDHEVLLE--MHCVGI--CGSDVHYLTH-GQIGDFRLSDPMIVGHEAS-------------- 129 (408)
Q Consensus 69 ~~~p~~~~~~~~~~lp~~~~~~~~~~--~~~~~~--~g~~vlv~g~-G~vG~~~i~~a~~~G~~~~-------------- 129 (408)
+..|+++++++.+.++....++..+. ...... .+++++|+|+ |++|++++++++.+|++..
T Consensus 110 ~~lp~~~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~~ 189 (324)
T cd08288 110 VPLPEGLSARQAMAIGTAGFTAMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLRS 189 (324)
T ss_pred eeCCCCCCHHHHhhhhhHHHHHHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh
Confidence 78888888755555554433332110 001122 3578999985 9999999999998887421
Q ss_pred -------------------------eEEEccCchH--HHHhhccCCcEEEEEccCC-CCcccCHHHHHhcCcEEEEeecC
Q psy1413 130 -------------------------GIVSKVGAKV--KHLKATRPGGCLVIVGAGS-QDVKIPLVLTMTKEIDIRGVFRY 181 (408)
Q Consensus 130 -------------------------~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~-~~~~~~~~~~~~~~~~l~g~~~~ 181 (408)
.++++++... ..+..++.+|+++.+|... .+..+++..++.+++++.+....
T Consensus 190 ~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (324)
T cd08288 190 LGASEIIDRAELSEPGRPLQKERWAGAVDTVGGHTLANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSV 269 (324)
T ss_pred cCCCEEEEcchhhHhhhhhccCcccEEEECCcHHHHHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEee
Confidence 2244444311 4567778889999999753 23345555666899999987522
Q ss_pred --C-----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 182 --A-----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 182 --~-----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
. ..++.+++++.++++++ +.+.++++++++||+.+.+++. ..|+++
T Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~---i~~~~~~~~~~~a~~~~~~~~~-~~~vvv 322 (324)
T cd08288 270 MAPIERRRAAWARLARDLDPALLEA---LTREIPLADVPDAAEAILAGQV-RGRVVV 322 (324)
T ss_pred cccchhhHHHHHHHHHHHhcCCccc---cceeecHHHHHHHHHHHhcCCc-cCeEEE
Confidence 1 23566777887887753 4789999999999999987764 345554
No 244
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=98.20 E-value=2.6e-06 Score=80.25 Aligned_cols=108 Identities=25% Similarity=0.343 Sum_probs=80.7
Q ss_pred ceeeeCCCCCCcccccccchhhhhhhhhhccCc----CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhH-HH
Q psy1413 282 DFCHKLPDHVSLEEGALLEPLSVGVHACRRAGV----TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKL-KT 356 (408)
Q Consensus 282 ~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~----~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-~~ 356 (408)
...+++|+.+..+.+....+.++++.+++.... .++.+++|+|+|.+|+.+++.++..|+..|++++|+.++. +.
T Consensus 139 ~~a~~~~k~vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~l 218 (311)
T cd05213 139 QKAIKVGKRVRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEEL 218 (311)
T ss_pred HHHHHHHHHHhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH
Confidence 345667888887777777777777777643322 4689999999999999999999999988899999998876 55
Q ss_pred HHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413 357 AKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 357 ~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~ 402 (408)
++++|+. +++. +++.+.+ ...|+||.|++.+.+
T Consensus 219 a~~~g~~-~~~~------~~~~~~l------~~aDvVi~at~~~~~ 251 (311)
T cd05213 219 AKELGGN-AVPL------DELLELL------NEADVVISATGAPHY 251 (311)
T ss_pred HHHcCCe-EEeH------HHHHHHH------hcCCEEEECCCCCch
Confidence 6778873 3332 3333333 247999999998776
No 245
>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase. PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding
Probab=98.18 E-value=2.2e-06 Score=80.71 Aligned_cols=220 Identities=20% Similarity=0.238 Sum_probs=154.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~ 74 (408)
+.++|+|++|++.. .+... .+..+|.++|||++|+|+++|+++..+++||+|+... ++...+...++..|++
T Consensus 34 v~~~~i~~~d~~~~-~~~~~-~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~p~~ 111 (323)
T cd05276 34 VAAAGVNRADLLQR-QGLYP-PPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPVPEG 111 (323)
T ss_pred EEEeecCHHHHHHh-CCCCC-CCCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccCCCC
Confidence 45899999999887 34322 2335688999999999999999999999999998653 2334555667777887
Q ss_pred eeecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCc-------------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHE------------------------- 127 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~------------------------- 127 (408)
+++.+.+.++.+..+++.+...... ..+++++|+| .|++|+..+++++..|+.
T Consensus 112 ~~~~~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (323)
T cd05276 112 LSLVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEACRALGADVAINY 191 (323)
T ss_pred CCHHHHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEEeC
Confidence 7775555565555444432111112 2467899988 578998887777766653
Q ss_pred -----------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCCC----
Q psy1413 128 -----------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYAN---- 183 (408)
Q Consensus 128 -----------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~~---- 183 (408)
++.++++.|... ..+++++++|+++.+|.... ...++...++.+++++.++.....
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (323)
T cd05276 192 RTEDFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEE 271 (323)
T ss_pred CchhHHHHHHHHhCCCCeEEEEECCchHHHHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhc
Confidence 223334333221 45788899999999996543 345666666789999998764321
Q ss_pred -------cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 184 -------DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 184 -------~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
.++++++++.++++. ++.++.|++++++++++.+.++..
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~ 317 (323)
T cd05276 272 KAALAAAFREHVWPLFASGRIR--PVIDKVFPLEEAAEAHRRMESNEH 317 (323)
T ss_pred cHHHHHHHHHHHHHHHHCCCcc--CCcceEEcHHHHHHHHHHHHhCCC
Confidence 246788888888885 357899999999999999987643
No 246
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=98.17 E-value=1e-05 Score=70.11 Aligned_cols=83 Identities=20% Similarity=0.252 Sum_probs=60.3
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-------hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcC-C
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE-------HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQG-E 388 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-------~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~ 388 (408)
.+|||+|+ |++|+.+++++...|++++++++|+. +..+.+++.|+...+-..|..+.+++.+.+.++... .
T Consensus 1 gtylitGG~gglg~~la~~La~~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~~~~~Dv~d~~~v~~~~~~~~~~~~ 80 (181)
T PF08659_consen 1 GTYLITGGLGGLGQSLARWLAERGARRLILLGRSGAPSAEAEAAIRELESAGARVEYVQCDVTDPEAVAAALAQLRQRFG 80 (181)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEEEEE--TTSHHHHHHHHHTSHTTSS
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCCEEEEeccCCCccHHHHHHHHHHHhCCCceeeeccCccCHHHHHHHHHHHHhccC
Confidence 47999999 99999999999999999999999982 123456777887776677777888999988887654 4
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
+++.||.+.|..
T Consensus 81 ~i~gVih~ag~~ 92 (181)
T PF08659_consen 81 PIDGVIHAAGVL 92 (181)
T ss_dssp -EEEEEE-----
T ss_pred Ccceeeeeeeee
Confidence 789999999864
No 247
>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1. Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.
Probab=98.13 E-value=1.5e-06 Score=83.50 Aligned_cols=227 Identities=21% Similarity=0.292 Sum_probs=151.2
Q ss_pred CCeeeecccchhhhhcCCCC--------C-----CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------
Q psy1413 1 MHCVGICGSDVHYLTHGQIG--------D-----FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP--------- 58 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~--------~-----~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~--------- 58 (408)
|.++++|++|++.+. +... . ....+|.++|||++|+|+++|++++++++||||+..+
T Consensus 36 v~~~~i~~~d~~~~~-g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~ 114 (350)
T cd08248 36 VHAASVNPIDVLMRS-GYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGDEVWGAVPPWSQGTHA 114 (350)
T ss_pred EEEEecCchhHHHHc-CCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccCCCCCEEEEecCCCCCccce
Confidence 468999999999874 3210 0 0246688999999999999999999999999998753
Q ss_pred CcccccCCcceeccceeeecccccCCCCCCcceEEEEeeeee-----cCCeEEEEc-cCccccccccccccccCcc----
Q psy1413 59 EFRNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-----CGSDVHYLT-HGQIGDFRLSDPMIVGHEA---- 128 (408)
Q Consensus 59 ~~~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-----~g~~vlv~g-~G~vG~~~i~~a~~~G~~~---- 128 (408)
++...+...++..|+.+++.+.+.++....+++........+ .+++++|+| .|.+|++++++++.+|+..
T Consensus 115 ~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~ 194 (350)
T cd08248 115 EYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTC 194 (350)
T ss_pred eEEEecHHHeecCCCCCCHHHHhhchhHHHHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEe
Confidence 344566667788888887755555555555544321111222 378999998 6999999988888777642
Q ss_pred ----------------------------------eeEEEccCchH--HHHhhccCCcEEEEEccCCCC----ccc-----
Q psy1413 129 ----------------------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD----VKI----- 163 (408)
Q Consensus 129 ----------------------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~----~~~----- 163 (408)
+.+++++|... ..+++++++|+++.+|..... ..+
T Consensus 195 ~~~~~~~~~~~g~~~~~~~~~~~~~~~l~~~~~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 274 (350)
T cd08248 195 STDAIPLVKSLGADDVIDYNNEDFEEELTERGKFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGML 274 (350)
T ss_pred CcchHHHHHHhCCceEEECCChhHHHHHHhcCCCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhh
Confidence 23333433221 568999999999999854311 111
Q ss_pred ----CHHHHHhc----CcEEE-EeecC-CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 164 ----PLVLTMTK----EIDIR-GVFRY-ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 164 ----~~~~~~~~----~~~l~-g~~~~-~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
++..+..+ ...+. +.... ...+.++++++.++.++ +++++.|+++++.++|+.+.+++. ..|+++
T Consensus 275 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~~~~~~~a~~~~~~~~~-~~~vv~ 349 (350)
T cd08248 275 KSAVDLLKKNVKSLLKGSHYRWGFFSPSGSALDELAKLVEDGKIK--PVIDKVFPFEEVPEAYEKVESGHA-RGKTVI 349 (350)
T ss_pred hhHHHHHHHHHHHHhcCCCeeEEEECCCHHHHHHHHHHHhCCCEe--cccceeecHHHHHHHHHHHhcCCC-ceEEEe
Confidence 11111111 11111 11122 35689999999999875 358899999999999999987653 345543
No 248
>cd08241 QOR1 Quinone oxidoreductase (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic
Probab=98.11 E-value=3e-06 Score=79.90 Aligned_cols=225 Identities=22% Similarity=0.311 Sum_probs=152.4
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~ 74 (408)
+.++++|++|++.+. +... ....+|.++|||++|+|+.+|+++..+++||+|+..+ .+.......++..|++
T Consensus 34 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~ 111 (323)
T cd08241 34 VEAAGVNFPDLLMIQ-GKYQ-VKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPLPDG 111 (323)
T ss_pred EEEEecCHHHHHHHc-CCCC-CCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeCCCC
Confidence 357899999999873 3321 1224577899999999999999999999999999764 2234445566777777
Q ss_pred eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEcc-CccccccccccccccCc-------------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLTH-GQIGDFRLSDPMIVGHE------------------------- 127 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g~-G~vG~~~i~~a~~~G~~------------------------- 127 (408)
+++.+...++.+..+++........+ .++.++|+|+ |.+|++.+++++..|+.
T Consensus 112 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (323)
T cd08241 112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALARALGADHVIDY 191 (323)
T ss_pred CCHHHHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHHHHcCCceeeec
Confidence 76644333444333333211111112 4678889885 88998887777766643
Q ss_pred -----------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcc-cCHHHHHhcCcEEEEeecCC-----
Q psy1413 128 -----------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVK-IPLVLTMTKEIDIRGVFRYA----- 182 (408)
Q Consensus 128 -----------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~-~~~~~~~~~~~~l~g~~~~~----- 182 (408)
++.+++++|... ..+++++++|+++.+|....... ++......++.++.+.....
T Consensus 192 ~~~~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (323)
T cd08241 192 RDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARRE 271 (323)
T ss_pred CCccHHHHHHHHcCCCCcEEEEECccHHHHHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchh
Confidence 233344443311 46889999999999997654333 44545677889988875331
Q ss_pred -----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413 183 -----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM 230 (408)
Q Consensus 183 -----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv 230 (408)
..++++++++.++.+. +++++.|+++++.++|+.+..+.. ..|++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv 321 (323)
T cd08241 272 PELLRANLAELFDLLAEGKIR--PHVSAVFPLEQAAEALRALADRKA-TGKVV 321 (323)
T ss_pred HHHHHHHHHHHHHHHHCCCcc--cccceEEcHHHHHHHHHHHHhCCC-CCcEE
Confidence 2467788999998875 457899999999999999886643 34444
No 249
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=98.07 E-value=0.00014 Score=72.55 Aligned_cols=82 Identities=26% Similarity=0.271 Sum_probs=56.3
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh--hhHHH-HHHcCCCe-EEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE--HKLKT-AKEMGADA-TVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~~-~~~~ga~~-~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
.++++|||+|+ |++|..+++++...|++ |+++++.. ++++. .++++... .+|. .+.+++++.+..+.. ..
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~-vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv---~~~~~~~~~~~~~~~~~g 283 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAH-VVCLDVPAAGEALAAVANRVGGTALALDI---TAPDAPARIAEHLAERHG 283 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHHHHhCC
Confidence 46789999999 99999999999999998 77777642 33333 34455432 2333 345666666655543 23
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
++|.+|++.|..
T Consensus 284 ~id~vi~~AG~~ 295 (450)
T PRK08261 284 GLDIVVHNAGIT 295 (450)
T ss_pred CCCEEEECCCcC
Confidence 799999999853
No 250
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=98.06 E-value=4.1e-05 Score=69.39 Aligned_cols=85 Identities=26% Similarity=0.311 Sum_probs=65.8
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc----CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM----GADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~----ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
....++||+|+ +|+|..+++.+...|.. +++++|+.+|++.+ +++ |....+-..|.++.++.++...++.. +
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~-liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYN-LILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcC
Confidence 56689999999 99999999999999997 99999999998765 333 33333445555666777777777654 3
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
..+|+.+|++|-.
T Consensus 83 ~~IdvLVNNAG~g 95 (265)
T COG0300 83 GPIDVLVNNAGFG 95 (265)
T ss_pred CcccEEEECCCcC
Confidence 5799999999844
No 251
>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family. Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.
Probab=98.02 E-value=7e-06 Score=77.51 Aligned_cols=226 Identities=21% Similarity=0.236 Sum_probs=155.3
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~ 74 (408)
|.++++|++|++.+. +.+. .+..+|.++|||++|+|+.+|+++..+++||+|+... .+...+...++..|+.
T Consensus 34 v~~~~~~~~d~~~~~-~~~~-~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~ip~~ 111 (325)
T TIGR02824 34 VAAAGVNRPDLLQRA-GKYP-PPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPEG 111 (325)
T ss_pred EEEEecCHHHHHHhc-CCCC-CCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeCCCC
Confidence 357899999998873 3222 2234578999999999999999999999999998752 2334455566777777
Q ss_pred eeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc-------------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE------------------------- 127 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~------------------------- 127 (408)
+++.+.+.++.+..+++........+ .+++++|.| .|++|++++++++.+|++
T Consensus 112 ~~~~~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~ 191 (325)
T TIGR02824 112 LSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAACEALGADIAINY 191 (325)
T ss_pred CCHHHHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCcEEEec
Confidence 77655555555544444221112222 477888988 588998888877766653
Q ss_pred -----------------ceeEEEccCch--HHHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC-----
Q psy1413 128 -----------------ASGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA----- 182 (408)
Q Consensus 128 -----------------~~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~----- 182 (408)
++.+++++|.. ...+++++++|+++.+|.... ...++...++.+++++.+.....
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (325)
T TIGR02824 192 REEDFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAE 271 (325)
T ss_pred CchhHHHHHHHHcCCCCeEEEEECCchHHHHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhh
Confidence 22233333321 146788999999999996542 23566666778999999876332
Q ss_pred ------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 183 ------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 183 ------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
..+.++++++++++++ +++++.|++++++++++.+.++.. ..|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~~v~ 323 (325)
T TIGR02824 272 KAAIAAELREHVWPLLASGRVR--PVIDKVFPLEDAAQAHALMESGDH-IGKIVL 323 (325)
T ss_pred hHHHHHHHHHHHHHHHHCCccc--CccccEEeHHHHHHHHHHHHhCCC-cceEEE
Confidence 1145677888888875 347889999999999999887643 445554
No 252
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=97.98 E-value=1.1e-05 Score=76.11 Aligned_cols=226 Identities=25% Similarity=0.345 Sum_probs=153.9
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----------CcccccCCcce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----------EFRNVCLSPIL 69 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----------~~~~~~~~~~~ 69 (408)
+.++++|++|++.+ .+... ....+|.++|||++|+|+++|+++++|++||+|+..+ .+.......++
T Consensus 34 v~~~~i~~~d~~~~-~g~~~-~~~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~ 111 (325)
T cd08253 34 VHASGVNPVDTYIR-AGAYP-GLPPLPYVPGSDGAGVVEAVGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLV 111 (325)
T ss_pred EEEEecChhHhhhc-cCCCC-CCCCCCeecccceEEEEEeeCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcE
Confidence 35889999999987 33322 2235788999999999999999999999999998764 22344445667
Q ss_pred eccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCc--------------------
Q psy1413 70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------- 127 (408)
Q Consensus 70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------- 127 (408)
..|+++++.+.+.++.+..+++........+ .+++++|+| .+++|++++++++..|.+
T Consensus 112 ~ip~~~~~~~aa~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~ 191 (325)
T cd08253 112 PLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQAGAD 191 (325)
T ss_pred eCCCCCCHHHHhhhhhHHHHHHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCC
Confidence 7777777655555555544443221111122 478899988 588998888877766653
Q ss_pred ----------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC-
Q psy1413 128 ----------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA- 182 (408)
Q Consensus 128 ----------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~- 182 (408)
++.++++.+... ..+++++++|+++.+|.......++...++.++.++.+...+.
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (325)
T cd08253 192 AVFNYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTA 271 (325)
T ss_pred EEEeCCCcCHHHHHHHHcCCCceEEEEECCchHHHHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhc
Confidence 222333333221 3578889999999999765445566666677888887765332
Q ss_pred --C----cHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEE
Q psy1413 183 --N----DYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMI 231 (408)
Q Consensus 183 --~----~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi 231 (408)
. .++++.+++.++.+++ +.++.|++++++++++.+.++. ..+|+++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~~~~~~~~~~-~~~kvv~ 323 (325)
T cd08253 272 TPEERAAAAEAIAAGLADGALRP--VIAREYPLEEAAAAHEAVESGG-AIGKVVL 323 (325)
T ss_pred CHHHHHHHHHHHHHHHHCCCccC--ccccEEcHHHHHHHHHHHHcCC-CcceEEE
Confidence 2 2455667777777653 4788999999999999998754 4455554
No 253
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=97.97 E-value=3.3e-06 Score=82.80 Aligned_cols=140 Identities=19% Similarity=0.275 Sum_probs=91.8
Q ss_pred ceeecCCCcccccccccCCccccccceeecccCCCCccceeEEeeccceeee---C-CCCCCcccccccchhhhhhh-hh
Q psy1413 235 RVAIEPGVPCRTCTYCKEGRYNLCRQIFFCATPPDHGNLSRYYRHAADFCHK---L-PDHVSLEEGALLEPLSVGVH-AC 309 (408)
Q Consensus 235 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~---~-p~~~~~~~aa~~~~~~~~~~-~~ 309 (408)
.|...|.. |++|..| ++.|.....+|. ..++.|++++.+.. .+.. | +..++...+ +.. +.
T Consensus 108 ~V~GE~qI-~gQvk~a----~~~a~~~~~~g~-~l~~lf~~a~~~~k-~vr~~t~i~~~~vSv~~~--------Av~la~ 172 (417)
T TIGR01035 108 MVVGETQI-LGQVKNA----YKVAQEEKTVGK-VLERLFQKAFSVGK-RVRTETDISAGAVSISSA--------AVELAE 172 (417)
T ss_pred hhcCChHH-HHHHHHH----HHHHHHcCCchH-HHHHHHHHHHHHhh-hhhhhcCCCCCCcCHHHH--------HHHHHH
Confidence 44444444 8999888 566766666654 35688998887765 3322 2 222332211 111 11
Q ss_pred hccCcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHH-HHHHcCCCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413 310 RRAGVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLK-TAKEMGADATVLIDRNHSLEEISTHIIELLQGE 388 (408)
Q Consensus 310 ~~~~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~ 388 (408)
+.....++.+++|+|+|.+|..++++++..|+.+|++++|+.++.+ .++++|.. .++. ++..+.+ .
T Consensus 173 ~~~~~l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~------~~l~~~l------~ 239 (417)
T TIGR01035 173 RIFGSLKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKF------EDLEEYL------A 239 (417)
T ss_pred HHhCCccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeH------HHHHHHH------h
Confidence 2233356789999999999999999999999888999999988765 55677764 3332 3333333 2
Q ss_pred CCceEEEcccchhh
Q psy1413 389 QPDKTIDCSGIEST 402 (408)
Q Consensus 389 ~~d~i~d~~g~~~~ 402 (408)
++|+||+|+|.+..
T Consensus 240 ~aDvVi~aT~s~~~ 253 (417)
T TIGR01035 240 EADIVISSTGAPHP 253 (417)
T ss_pred hCCEEEECCCCCCc
Confidence 68999999987765
No 254
>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.97 E-value=6.5e-06 Score=77.80 Aligned_cols=224 Identities=20% Similarity=0.259 Sum_probs=150.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----------CcccccCCcce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----------EFRNVCLSPIL 69 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----------~~~~~~~~~~~ 69 (408)
|.++++|++|++... +... .....|.++|||++|+|+++|+++..+++||+|.... ++...+...++
T Consensus 34 v~~~~i~~~d~~~~~-~~~~-~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~ 111 (326)
T cd08272 34 VHASGVNPLDTKIRR-GGAA-ARPPLPAILGCDVAGVVEAVGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLA 111 (326)
T ss_pred EEEEecCHHHHHHhC-CCCC-CCCCCCcccccceeEEEEEeCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcc
Confidence 468999999999874 3221 2234578899999999999999999999999999754 23344555666
Q ss_pred eccceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCcc-------------------
Q psy1413 70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHEA------------------- 128 (408)
Q Consensus 70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~~------------------- 128 (408)
..|+++++.+.+.++....+++........+ .+++++|+| .|.+|++++++++.+|.+.
T Consensus 112 ~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~ 191 (326)
T cd08272 112 LKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASSEKAAFARSLGADP 191 (326)
T ss_pred cCCCCCCHHHHHHhHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEechHHHHHHHHcCCCE
Confidence 7777776644444444333333211111122 478888887 7899998888877766643
Q ss_pred ---------------------eeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecCC---
Q psy1413 129 ---------------------SGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRYA--- 182 (408)
Q Consensus 129 ---------------------~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~~--- 182 (408)
+.++++++... +.+++++++|+++.+|... . ..+.....+++++.+.....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~ 268 (326)
T cd08272 192 IIYYRETVVEYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGA-T--HDLAPLSFRNATYSGVFTLLPLL 268 (326)
T ss_pred EEecchhHHHHHHHhcCCCCCcEEEECCChHHHHHHHHHhccCCEEEEEecCC-c--cchhhHhhhcceEEEEEcccccc
Confidence 22333333221 4678999999999998664 2 22333347788877765321
Q ss_pred ---------CcHHHHHHHHHcCCCCCCCcee-eeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 183 ---------NDYPIALAMVASGKVDVKKLIT-HNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 183 ---------~~~~~~~~l~~~g~~~~~~~i~-~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
..++++++++.++.++. +++ +.|++++++++|+.+.+++. ..|++++
T Consensus 269 ~~~~~~~~~~~~~~~~~~l~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~ 325 (326)
T cd08272 269 TGEGRAHHGEILREAARLVERGQLRP--LLDPRTFPLEEAAAAHARLESGSA-RGKIVID 325 (326)
T ss_pred cccchhhHHHHHHHHHHHHHCCCccc--ccccceecHHHHHHHHHHHHcCCc-ccEEEEE
Confidence 24677888998888753 445 89999999999999987653 5566653
No 255
>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy). The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.
Probab=97.96 E-value=1.5e-05 Score=77.21 Aligned_cols=76 Identities=18% Similarity=0.253 Sum_probs=62.8
Q ss_pred cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413 314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393 (408)
Q Consensus 314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i 393 (408)
.-++++++|.|.|++|+.+++.++.+|++ |+++++++.|++.++.+|++.+ + .++.+ +++|++
T Consensus 199 ~l~GktVvViG~G~IG~~va~~ak~~Ga~-ViV~d~d~~R~~~A~~~G~~~~-~---------~~e~v------~~aDVV 261 (413)
T cd00401 199 MIAGKVAVVAGYGDVGKGCAQSLRGQGAR-VIVTEVDPICALQAAMEGYEVM-T---------MEEAV------KEGDIF 261 (413)
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEECChhhHHHHHhcCCEEc-c---------HHHHH------cCCCEE
Confidence 46889999999999999999999999996 8889999999999999998543 1 11222 368999
Q ss_pred EEcccchhhhhhc
Q psy1413 394 IDCSGIESTIKLG 406 (408)
Q Consensus 394 ~d~~g~~~~~~~~ 406 (408)
|+|+|....++.+
T Consensus 262 I~atG~~~~i~~~ 274 (413)
T cd00401 262 VTTTGNKDIITGE 274 (413)
T ss_pred EECCCCHHHHHHH
Confidence 9999998887754
No 256
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=97.96 E-value=4.2e-05 Score=64.94 Aligned_cols=84 Identities=30% Similarity=0.252 Sum_probs=64.7
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC--hhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHh-cCCC
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDIL--EHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELL-QGEQ 389 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~--~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~-~~~~ 389 (408)
+++||+|+ +++|+.+++.+...|+++|++++|+ .++.+. +++.+....+-..|..+.+++++.+.++. ....
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 37899999 9999999999999999999999998 444433 34456544444456667788888888876 3468
Q ss_pred CceEEEcccchh
Q psy1413 390 PDKTIDCSGIES 401 (408)
Q Consensus 390 ~d~i~d~~g~~~ 401 (408)
+|++|+|.|...
T Consensus 81 ld~li~~ag~~~ 92 (167)
T PF00106_consen 81 LDILINNAGIFS 92 (167)
T ss_dssp ESEEEEECSCTT
T ss_pred cccccccccccc
Confidence 999999999754
No 257
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=97.95 E-value=7.6e-05 Score=65.97 Aligned_cols=85 Identities=28% Similarity=0.320 Sum_probs=65.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC-CeEEecCCCCChHHHHHHHHHHhcC-CCCc
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA-DATVLIDRNHSLEEISTHIIELLQG-EQPD 391 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga-~~~i~~~~~~~~~~~~~~~~~~~~~-~~~d 391 (408)
.++.++|+|+ +|+|...++.+...|++ |++..|+.++++.+ .+++. ....-.-|..+.+++++.+..+... ..+|
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~-vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iD 83 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAK-VVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRID 83 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCe-EEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCccc
Confidence 3478999999 99999999999999997 99999999999876 66773 2222223344567777888777653 5699
Q ss_pred eEEEcccchh
Q psy1413 392 KTIDCSGIES 401 (408)
Q Consensus 392 ~i~d~~g~~~ 401 (408)
+.+|..|...
T Consensus 84 iLvNNAGl~~ 93 (246)
T COG4221 84 ILVNNAGLAL 93 (246)
T ss_pred EEEecCCCCc
Confidence 9999999653
No 258
>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases. Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et
Probab=97.95 E-value=3.1e-06 Score=79.36 Aligned_cols=217 Identities=22% Similarity=0.327 Sum_probs=145.0
Q ss_pred CCeeeecccchhhhhcCCCC-CCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCccee
Q psy1413 1 MHCVGICGSDVHYLTHGQIG-DFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILR 70 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~-~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~ 70 (408)
|.+++||++|++.+. +... .....+|.++|||++|+|+++|++++.+++||+|+..+ ++.......++.
T Consensus 34 v~~~~i~~~d~~~~~-g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~ 112 (309)
T cd05289 34 VHAAGVNPVDLKIRE-GLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELAL 112 (309)
T ss_pred EEEeeCCHHHHHHhc-CCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhcc
Confidence 458999999999874 3221 11235588999999999999999999999999999765 122344445566
Q ss_pred ccceeeecccccCCCCCCcceEEEEeee-eecCCeEEEEcc-CccccccccccccccCcc--------------------
Q psy1413 71 RRFSLRFREQKPIEDPDDHEVLLEMHCV-GICGSDVHYLTH-GQIGDFRLSDPMIVGHEA-------------------- 128 (408)
Q Consensus 71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~g~~vlv~g~-G~vG~~~i~~a~~~G~~~-------------------- 128 (408)
.|+++++...+.++....+++....... ...+++++|+|+ |.+|++++++++..|...
T Consensus 113 ~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~ 192 (309)
T cd05289 113 KPANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAANADFLRSLGADEV 192 (309)
T ss_pred CCCCCCHHHHHhhhHHHHHHHHHHHhhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecchhHHHHHHcCCCEE
Confidence 6766665444433333333322111111 124788999884 889988887777666542
Q ss_pred -----------------eeEEEccCch--HHHHhhccCCcEEEEEccCCCCcccCHHHHHhcCcEEEEeecC--CCcHHH
Q psy1413 129 -----------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQDVKIPLVLTMTKEIDIRGVFRY--ANDYPI 187 (408)
Q Consensus 129 -----------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~~~~l~g~~~~--~~~~~~ 187 (408)
+.++++++.. ...+++++++|+++.+|....... ....+++++...... ...+++
T Consensus 193 ~~~~~~~~~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 268 (309)
T cd05289 193 IDYTKGDFERAAAPGGVDAVLDTVGGETLARSLALVKPGGRLVSIAGPPPAEQ----AAKRRGVRAGFVFVEPDGEQLAE 268 (309)
T ss_pred EeCCCCchhhccCCCCceEEEECCchHHHHHHHHHHhcCcEEEEEcCCCcchh----hhhhccceEEEEEecccHHHHHH
Confidence 2223333322 156889999999999997544221 334455655554332 356888
Q ss_pred HHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 188 ALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 188 ~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
++++++++.++ +++++.|++++++++|+.+.+++.
T Consensus 269 ~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~ 303 (309)
T cd05289 269 LAELVEAGKLR--PVVDRVFPLEDAAEAHERLESGHA 303 (309)
T ss_pred HHHHHHCCCEE--EeeccEEcHHHHHHHHHHHHhCCC
Confidence 99999998865 458899999999999999987653
No 259
>PRK06139 short chain dehydrogenase; Provisional
Probab=97.93 E-value=6.4e-05 Score=71.60 Aligned_cols=84 Identities=23% Similarity=0.279 Sum_probs=64.0
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcC-CC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQG-EQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~ 389 (408)
.++++||+|+ |++|..+++.+...|++ |++++|++++++.+ ++.|.+..+...|..+.+++++.+.++... .+
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~-Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGAR-LVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 4578999999 99999999999999997 88899998877543 345665544445555667777776665432 57
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|+++|..
T Consensus 85 iD~lVnnAG~~ 95 (330)
T PRK06139 85 IDVWVNNVGVG 95 (330)
T ss_pred CCEEEECCCcC
Confidence 99999999853
No 260
>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.92 E-value=1.7e-05 Score=75.40 Aligned_cols=227 Identities=19% Similarity=0.183 Sum_probs=153.2
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc------CcccccCCcceeccce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP------EFRNVCLSPILRRRFS 74 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~------~~~~~~~~~~~~~p~~ 74 (408)
+.++|+|++|++.+. +.... ...+|.++|||++|+|+.+|+++.++++||+|+... ++.......++..|+.
T Consensus 33 v~~~~i~~~d~~~~~-g~~~~-~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~ip~~ 110 (337)
T cd08275 33 VEACGLNFADLMARQ-GLYDS-APKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPDG 110 (337)
T ss_pred EEEEecCHHHHHHHC-CCCCC-CCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEecCCCeeeeEEEecHHHeEECCCC
Confidence 357899999999874 33221 234578899999999999999999999999998753 2334455567777887
Q ss_pred eeecccccCCCCCCcceEEEEeeee-ecCCeEEEEcc-Cccccccccccccc-cC-------------------------
Q psy1413 75 LRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTH-GQIGDFRLSDPMIV-GH------------------------- 126 (408)
Q Consensus 75 ~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~-G~vG~~~i~~a~~~-G~------------------------- 126 (408)
+++.+.+.++.+..+++........ ..+++++|+|+ |.+|++++++++.+ +.
T Consensus 111 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g~~g~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 190 (337)
T cd08275 111 MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGTASASKHEALKENGVTHVIDY 190 (337)
T ss_pred CCHHHHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcchHHHHHHHHHHHccCcEEEEeCCHHHHHHHHHcCCcEEeeC
Confidence 7764444444444444322111111 24788999885 88888877766655 21
Q ss_pred ---------------cceeEEEccCchH--HHHhhccCCcEEEEEccCCCC-----------------cccCHHHHHhcC
Q psy1413 127 ---------------EASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQD-----------------VKIPLVLTMTKE 172 (408)
Q Consensus 127 ---------------~~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~-----------------~~~~~~~~~~~~ 172 (408)
.++.+++++|... ..+++++++|+++.+|..... ..++...++.++
T Consensus 191 ~~~~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (337)
T cd08275 191 RTQDYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISEN 270 (337)
T ss_pred CCCcHHHHHHHHhCCCceEEEECCcHHHHHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcC
Confidence 1233444444322 568899999999999965421 122334567888
Q ss_pred cEEEEeecC----C-----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 173 IDIRGVFRY----A-----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 173 ~~l~g~~~~----~-----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+++.+.... . ..+.++++++.++.+.+ +.++.|++++++++++.+.+++. ..|++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~kvv~~ 336 (337)
T cd08275 271 KSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP--KIDSVFPFEEVGEAMRRLQSRKN-IGKVVLT 336 (337)
T ss_pred ceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC--ceeeEEcHHHHHHHHHHHHcCCC-cceEEEe
Confidence 888887532 1 13677888898888654 47889999999999999987653 4566554
No 261
>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional
Probab=97.88 E-value=1.9e-05 Score=78.39 Aligned_cols=105 Identities=17% Similarity=0.266 Sum_probs=81.3
Q ss_pred ecCCeEEEEccCccccccccccccccC-----------------------------------------------------
Q psy1413 100 ICGSDVHYLTHGQIGDFRLSDPMIVGH----------------------------------------------------- 126 (408)
Q Consensus 100 ~~g~~vlv~g~G~vG~~~i~~a~~~G~----------------------------------------------------- 126 (408)
..+++|+|+|+|.+|+.+++.++.+|+
T Consensus 163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~aeslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~~ 242 (509)
T PRK09424 163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMALF 242 (509)
T ss_pred cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHcCCeEEEeccccccccccchhhhcchhHHHHHHHHH
Confidence 458999999999999999887776664
Q ss_pred -----cceeEEEccCc---------hHHHHhhccCCcEEEEEccC-CCC--cccCHHHHHh-cCcEEEEeecCCCcHH-H
Q psy1413 127 -----EASGIVSKVGA---------KVKHLKATRPGGCLVIVGAG-SQD--VKIPLVLTMT-KEIDIRGVFRYANDYP-I 187 (408)
Q Consensus 127 -----~~~~vv~~~g~---------~~~~~~~l~~gG~iv~~G~~-~~~--~~~~~~~~~~-~~~~l~g~~~~~~~~~-~ 187 (408)
++|.+|++++. ..++++.+++||+++.+|.. .++ .+++...++. +++++.|.++.+..++ .
T Consensus 243 ~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~~ 322 (509)
T PRK09424 243 AEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPTQ 322 (509)
T ss_pred HhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHHH
Confidence 13455666653 24789999999999999985 343 4444455665 8999999998886665 5
Q ss_pred HHHHHHcCCCCCCCcee
Q psy1413 188 ALAMVASGKVDVKKLIT 204 (408)
Q Consensus 188 ~~~l~~~g~~~~~~~i~ 204 (408)
+.+++.++.+++.++++
T Consensus 323 As~lla~~~i~l~~lIt 339 (509)
T PRK09424 323 SSQLYGTNLVNLLKLLC 339 (509)
T ss_pred HHHHHHhCCccHHHHhc
Confidence 99999999998877766
No 262
>smart00829 PKS_ER Enoylreductase. Enoylreductase in Polyketide synthases.
Probab=97.84 E-value=8.8e-06 Score=75.25 Aligned_cols=214 Identities=17% Similarity=0.227 Sum_probs=145.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----CcccccCCcceecccee
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----EFRNVCLSPILRRRFSL 75 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----~~~~~~~~~~~~~p~~~ 75 (408)
|.++++|++|++.+. +. + +.|.++|||++|+|+++|++++.+++||+|.... ++...+...++..|+++
T Consensus 4 v~~~~i~~~d~~~~~-g~---~--~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~p~~~ 77 (288)
T smart00829 4 VRAAGLNFRDVLIAL-GL---L--PGEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARLVVPIPDGL 77 (288)
T ss_pred EEEEecCHHHHHHhc-CC---C--CCCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHHeEECCCCC
Confidence 468999999999884 32 2 2467899999999999999999999999998653 33455666778888888
Q ss_pred eecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCcc-------------------------
Q psy1413 76 RFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHEA------------------------- 128 (408)
Q Consensus 76 ~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~~------------------------- 128 (408)
++.+.+.++....+++........ ..+++++|.| .|.+|++++++++.+|+..
T Consensus 78 ~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~~~~ 157 (288)
T smart00829 78 SFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLRELGIPDDHIFS 157 (288)
T ss_pred CHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHcCCChhheee
Confidence 775555544443333322111111 2477888887 7899988888777666532
Q ss_pred -------------------eeEEEccCch--HHHHhhccCCcEEEEEccCCC--CcccCHHHHHhcCcEEEEeecC----
Q psy1413 129 -------------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQ--DVKIPLVLTMTKEIDIRGVFRY---- 181 (408)
Q Consensus 129 -------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~--~~~~~~~~~~~~~~~l~g~~~~---- 181 (408)
+.++++++.. ...+++++++|+++.+|.... ...++... +.+++++.+....
T Consensus 158 ~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 236 (288)
T smart00829 158 SRDLSFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRDNSQLGMAP-FRRNVSYHAVDLDALEE 236 (288)
T ss_pred CCCccHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCccccccchhh-hcCCceEEEEEHHHhhc
Confidence 2223333321 146788999999999996542 23334333 3556666554321
Q ss_pred -----CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCC
Q psy1413 182 -----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGA 223 (408)
Q Consensus 182 -----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~ 223 (408)
.+.+++++++++++++++. ..+.|+++++.++++.+..+.
T Consensus 237 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 281 (288)
T smart00829 237 GPDRIRELLAEVLELFAEGVLRPL--PVTVFPISDVEDAFRYMQQGK 281 (288)
T ss_pred ChHHHHHHHHHHHHHHHCCCccCc--CceEEcHHHHHHHHHHHhcCC
Confidence 1346778899999987653 568899999999999998864
No 263
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=97.82 E-value=7.1e-05 Score=61.39 Aligned_cols=74 Identities=22% Similarity=0.378 Sum_probs=56.0
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCC--eEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGAD--ATVLIDRNHSLEEISTHIIELLQGEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~--~~i~~~~~~~~~~~~~~~~~~~~~~~~d~ 392 (408)
.+.+++|+|+|+.|+.++..+..+|+++|.++.|+.+|.+.+ ++++.. ..+++ +++.+.+ ..+|+
T Consensus 11 ~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~------~~~~~~~------~~~Di 78 (135)
T PF01488_consen 11 KGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPL------EDLEEAL------QEADI 78 (135)
T ss_dssp TTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEG------GGHCHHH------HTESE
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeH------HHHHHHH------hhCCe
Confidence 578999999999999999999999999999999999988766 556432 24444 3333222 36899
Q ss_pred EEEcccchh
Q psy1413 393 TIDCSGIES 401 (408)
Q Consensus 393 i~d~~g~~~ 401 (408)
||+|++...
T Consensus 79 vI~aT~~~~ 87 (135)
T PF01488_consen 79 VINATPSGM 87 (135)
T ss_dssp EEE-SSTTS
T ss_pred EEEecCCCC
Confidence 999998763
No 264
>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.82 E-value=2.3e-05 Score=74.00 Aligned_cols=227 Identities=22% Similarity=0.300 Sum_probs=151.4
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----------CcccccCCcce
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----------EFRNVCLSPIL 69 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----------~~~~~~~~~~~ 69 (408)
|.++++|++|+... .+..+. ...+|.++|||++|+|+.+|+++..+++||+|...+ ++...+...++
T Consensus 34 v~~~~~~~~d~~~~-~~~~~~-~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~ 111 (328)
T cd08268 34 VEAIGLNRADAMFR-RGAYIE-PPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVV 111 (328)
T ss_pred EEEEecChHHhhee-ccccCC-CCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcE
Confidence 45899999999887 333221 235588999999999999999999999999998653 23345556677
Q ss_pred eccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEc-cCccccccccccccccCc--------------------
Q psy1413 70 RRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLT-HGQIGDFRLSDPMIVGHE-------------------- 127 (408)
Q Consensus 70 ~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g-~G~vG~~~i~~a~~~G~~-------------------- 127 (408)
..|+++++.+.+.++.+..+++........ ..++.++|+| .|++|+.++++++..|++
T Consensus 112 ~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~g~~ 191 (328)
T cd08268 112 KLPDGLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALLALGAA 191 (328)
T ss_pred eCCCCCCHHHHHHhhhHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCC
Confidence 778777764445555444444322111111 2467888888 488998887777766653
Q ss_pred ----------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCC-CcccCHHHHHhcCcEEEEeecCC
Q psy1413 128 ----------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ-DVKIPLVLTMTKEIDIRGVFRYA 182 (408)
Q Consensus 128 ----------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~-~~~~~~~~~~~~~~~l~g~~~~~ 182 (408)
++.++++.+... +.+++++++|+++.+|.... ...++....+.+++++.+.....
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (328)
T cd08268 192 HVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDE 271 (328)
T ss_pred EEEecCCccHHHHHHHHhCCCCceEEEECCchHhHHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEeccc
Confidence 223333333321 46789999999999996543 33455555678888888764321
Q ss_pred -----Cc----HHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 183 -----ND----YPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 183 -----~~----~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
.+ ++.+.+++.++.+.+ +.++.|+++++.++++.+.+++. ..|++++
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~vv~~ 327 (328)
T cd08268 272 ITLDPEARRRAIAFILDGLASGALKP--VVDRVFPFDDIVEAHRYLESGQQ-IGKIVVT 327 (328)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCCcC--CcccEEcHHHHHHHHHHHHcCCC-CceEEEe
Confidence 22 444556676777654 47888999999999999887543 3455543
No 265
>PRK08339 short chain dehydrogenase; Provisional
Probab=97.81 E-value=0.00017 Score=66.40 Aligned_cols=84 Identities=21% Similarity=0.267 Sum_probs=61.9
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-Hc----CCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EM----GADATVLIDRNHSLEEISTHIIELLQGEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~----ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (408)
.++++||+|+ +++|+.+++.+...|++ |++++|+.++++.+. ++ +....+..-|..+.+++++.+.++....+
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~ 85 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGAD-VILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGE 85 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCC
Confidence 3678999999 99999999999999997 888999877765442 22 43333333455566777777776654457
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|+++++.|..
T Consensus 86 iD~lv~nag~~ 96 (263)
T PRK08339 86 PDIFFFSTGGP 96 (263)
T ss_pred CcEEEECCCCC
Confidence 99999999863
No 266
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=97.79 E-value=5.5e-05 Score=74.49 Aligned_cols=89 Identities=22% Similarity=0.380 Sum_probs=64.6
Q ss_pred hhhhhhhhhhccC----cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHH-HHHHcCCCeEEecCCCCChH
Q psy1413 301 PLSVGVHACRRAG----VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLK-TAKEMGADATVLIDRNHSLE 375 (408)
Q Consensus 301 ~~~~~~~~~~~~~----~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~ 375 (408)
+.++++.++.... -.++.+++|+|+|.+|+.+++.++.+|+.+|++++|+.++.+ .++++|.+ +++. +
T Consensus 162 ~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~------~ 234 (423)
T PRK00045 162 AVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPL------D 234 (423)
T ss_pred CcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeH------H
Confidence 4555555553322 256789999999999999999999999988999999988865 55777764 3332 3
Q ss_pred HHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413 376 EISTHIIELLQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 376 ~~~~~~~~~~~~~~~d~i~d~~g~~~~ 402 (408)
+..+.+ .++|+||+|+|.+.+
T Consensus 235 ~~~~~l------~~aDvVI~aT~s~~~ 255 (423)
T PRK00045 235 ELPEAL------AEADIVISSTGAPHP 255 (423)
T ss_pred HHHHHh------ccCCEEEECCCCCCc
Confidence 333322 368999999997765
No 267
>PRK05872 short chain dehydrogenase; Provisional
Probab=97.77 E-value=0.00016 Score=67.83 Aligned_cols=84 Identities=24% Similarity=0.309 Sum_probs=61.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
.++++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++. ....-..|..+.+++++.+.++.. ..++
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 86 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAK-LALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGI 86 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999 99999999999999997 88899998877654 44542 222212444556777776666543 2479
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|++|++.|..
T Consensus 87 d~vI~nAG~~ 96 (296)
T PRK05872 87 DVVVANAGIA 96 (296)
T ss_pred CEEEECCCcC
Confidence 9999999963
No 268
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=97.77 E-value=0.00014 Score=62.32 Aligned_cols=85 Identities=24% Similarity=0.266 Sum_probs=61.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC---CCeEEecCCCCChHHHHHHHHHHhcC-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG---ADATVLIDRNHSLEEISTHIIELLQG-EQP 390 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~~-~~~ 390 (408)
-+.|+||+|| .|+|+.+++-...+|-+ ||+..|++++++++++.- ...+-|..| .+..++.+..+... -..
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~-VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d---~~~~~~lvewLkk~~P~l 79 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNT-VIICGRNEERLAEAKAENPEIHTEVCDVAD---RDSRRELVEWLKKEYPNL 79 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCE-EEEecCcHHHHHHHHhcCcchheeeecccc---hhhHHHHHHHHHhhCCch
Confidence 3679999998 99999999999999987 999999999999987743 344545444 23333333333322 367
Q ss_pred ceEEEcccchhhhh
Q psy1413 391 DKTIDCSGIESTIK 404 (408)
Q Consensus 391 d~i~d~~g~~~~~~ 404 (408)
++++|+.|.....+
T Consensus 80 NvliNNAGIqr~~d 93 (245)
T COG3967 80 NVLINNAGIQRNED 93 (245)
T ss_pred heeeecccccchhh
Confidence 99999999765444
No 269
>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.75 E-value=1.3e-05 Score=75.58 Aligned_cols=220 Identities=22% Similarity=0.249 Sum_probs=143.9
Q ss_pred CCeeeecccchhhhhcCCCCC-CCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCccee
Q psy1413 1 MHCVGICGSDVHYLTHGQIGD-FRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILR 70 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~-~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~ 70 (408)
+.++++|++|++.+. |.++. ....+|.++|||++|+|.++|+++.++++||||+... .+.......++.
T Consensus 33 v~~~~i~~~d~~~~~-g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~~~~~~~~~ 111 (319)
T cd08267 33 VHAASVNPVDWKLRR-GPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAK 111 (319)
T ss_pred EEEeeCCHHHHHHHc-CCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccCCCCceeeEEEEechhheEE
Confidence 358999999999874 32211 1234577899999999999999999999999998754 223455566777
Q ss_pred ccceeeecccccCCCCCCcceEEEEeee-eecCCeEEEEcc-CccccccccccccccCcc--------------------
Q psy1413 71 RRFSLRFREQKPIEDPDDHEVLLEMHCV-GICGSDVHYLTH-GQIGDFRLSDPMIVGHEA-------------------- 128 (408)
Q Consensus 71 ~p~~~~~~~~~~lp~~~~~~~~~~~~~~-~~~g~~vlv~g~-G~vG~~~i~~a~~~G~~~-------------------- 128 (408)
.|+++++++.+.++.+..+++....... ...+++++|+|+ |++|++++++++.+|++.
T Consensus 112 ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~~g~~~~ 191 (319)
T cd08267 112 KPEGVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGVCSTRNAELVRSLGADEV 191 (319)
T ss_pred CCCCCCHHHHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCHHHHHHHHHcCCCEe
Confidence 8887777555555544444432211111 124788999985 889988888777766542
Q ss_pred ------------------eeEEEccCch-H---HHHhhccCCcEEEEEccCCCCcccC-----HHH-HHhcCcEEEEeec
Q psy1413 129 ------------------SGIVSKVGAK-V---KHLKATRPGGCLVIVGAGSQDVKIP-----LVL-TMTKEIDIRGVFR 180 (408)
Q Consensus 129 ------------------~~vv~~~g~~-~---~~~~~l~~gG~iv~~G~~~~~~~~~-----~~~-~~~~~~~l~g~~~ 180 (408)
+.++++++.. . .....++++|+++.+|......... ... ...+.+.......
T Consensus 192 ~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (319)
T cd08267 192 IDYTTEDFVALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKP 271 (319)
T ss_pred ecCCCCCcchhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecC
Confidence 2333444321 1 1223389999999999764322211 111 1223333222211
Q ss_pred CCCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCC
Q psy1413 181 YANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGA 223 (408)
Q Consensus 181 ~~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~ 223 (408)
..+.++++++++++++++ +++++.|++++++++|+.+.+++
T Consensus 272 ~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~i~~a~~~~~~~~ 312 (319)
T cd08267 272 NAEDLEQLAELVEEGKLK--PVIDSVYPLEDAPEAYRRLKSGR 312 (319)
T ss_pred CHHHHHHHHHHHHCCCee--eeeeeEEcHHHHHHHHHHHhcCC
Confidence 136789999999999875 35889999999999999998764
No 270
>cd08251 polyketide_synthase polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a
Probab=97.75 E-value=2e-05 Score=73.59 Aligned_cols=219 Identities=18% Similarity=0.235 Sum_probs=147.5
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc--------CcccccCCcceecc
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP--------EFRNVCLSPILRRR 72 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~--------~~~~~~~~~~~~~p 72 (408)
+.++++|++|+..+. +.+. ....+|.++|||++|+|+++|++++++++||+|.... ++...+...++..|
T Consensus 14 v~~~~i~~~d~~~~~-~~~~-~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~p 91 (303)
T cd08251 14 VRAFSLNFGDLLCVR-GLYP-TMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPEDQVVRKP 91 (303)
T ss_pred EEEeecChHHHHHHC-CCCC-CCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecCCCCcceeeEEEccHHHeEECC
Confidence 358899999999874 3222 2235688999999999999999999999999998653 23455566778888
Q ss_pred ceeeecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCcce---------------------
Q psy1413 73 FSLRFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHEAS--------------------- 129 (408)
Q Consensus 73 ~~~~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~~~--------------------- 129 (408)
+++++++.+.++....+++... ....+ .+++++|++ .+.+|+..+++++.+|+...
T Consensus 92 ~~~~~~~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~g~~~~~ 170 (303)
T cd08251 92 ASLSFEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKLEYLKQLGVPHVI 170 (303)
T ss_pred CCCCHHHHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHcCCCEEE
Confidence 8888765666665555544322 12223 467888865 78899998888887776422
Q ss_pred ---------------------eEEEccCchH--HHHhhccCCcEEEEEccCCC--CcccCHHHHH----hcCcEEEEeec
Q psy1413 130 ---------------------GIVSKVGAKV--KHLKATRPGGCLVIVGAGSQ--DVKIPLVLTM----TKEIDIRGVFR 180 (408)
Q Consensus 130 ---------------------~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~--~~~~~~~~~~----~~~~~l~g~~~ 180 (408)
.++++++... ..+++++++|+++.+|.... ...++...+. ++++++.+...
T Consensus 171 ~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (303)
T cd08251 171 NYVEEDFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLL 250 (303)
T ss_pred eCCCccHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhh
Confidence 2222222111 46789999999999986542 2233433322 22222222221
Q ss_pred CC-----CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 181 YA-----NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 181 ~~-----~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
.. +.+.+++++++++.+++ +.++.|++++++++++.+.+++.
T Consensus 251 ~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 297 (303)
T cd08251 251 LDPEFIADYQAEMVSLVEEGELRP--TVSRIFPFDDIGEAYRYLSDREN 297 (303)
T ss_pred hCHHHHHHHHHHHHHHHHCCCccC--CCceEEcHHHHHHHHHHHHhCCC
Confidence 11 34777889999998763 47899999999999999987653
No 271
>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh
Probab=97.70 E-value=2.2e-05 Score=74.26 Aligned_cols=226 Identities=19% Similarity=0.249 Sum_probs=148.1
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc---------CcccccCCcceec
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP---------EFRNVCLSPILRR 71 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~---------~~~~~~~~~~~~~ 71 (408)
|.++++|++|++...... . ...+|.++|||++|+|+.+|+++..+++||+|...+ .+.......++..
T Consensus 34 v~~~~i~~~d~~~~~~~~-~--~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~i 110 (325)
T cd08271 34 VHAAGLNPVDWKVIAWGP-P--AWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPL 110 (325)
T ss_pred EEEEecCHHHHHHhcCCC-C--CCCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEEC
Confidence 358999999999874321 1 123478899999999999999999999999999764 2334555667777
Q ss_pred cceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEcc-CccccccccccccccCc----------------------
Q psy1413 72 RFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTH-GQIGDFRLSDPMIVGHE---------------------- 127 (408)
Q Consensus 72 p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~-G~vG~~~i~~a~~~G~~---------------------- 127 (408)
|+++++.+.+.++.+..+++........ ..+++++|+|+ |.+|++.+++++..|..
T Consensus 111 p~~~~~~~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~~g~~~~~ 190 (325)
T cd08271 111 PDSLSFEEAAALPCAGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTCSKRNFEYVKSLGADHVI 190 (325)
T ss_pred CCCCCHHHHHhhhhhHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEEcHHHHHHHHHcCCcEEe
Confidence 8877775555555554444422111112 25788999885 67888887777666653
Q ss_pred -------------------ceeEEEccCchH--HHHhhccCCcEEEEEccCCCCcccCH--HHHHhcCcEEEEeecCC--
Q psy1413 128 -------------------ASGIVSKVGAKV--KHLKATRPGGCLVIVGAGSQDVKIPL--VLTMTKEIDIRGVFRYA-- 182 (408)
Q Consensus 128 -------------------~~~vv~~~g~~~--~~~~~l~~gG~iv~~G~~~~~~~~~~--~~~~~~~~~l~g~~~~~-- 182 (408)
++.+++++++.. ..+++++++|+++.+|.......... ..+.++++++.+.....
T Consensus 191 ~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 270 (325)
T cd08271 191 DYNDEDVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDP 270 (325)
T ss_pred cCCCccHHHHHHHHcCCCCCcEEEECCCcHhHHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccch
Confidence 223333333221 46889999999999975433211111 12344555555443221
Q ss_pred -------CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEEEE
Q psy1413 183 -------NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVMIH 232 (408)
Q Consensus 183 -------~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvvi~ 232 (408)
+.+.+++++++++++++ +.++.|+++++.++++.+.++. ...|++++
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~~~~a~~~~~~~~-~~~kiv~~ 324 (325)
T cd08271 271 AAWQDLRYAGEELLELLAAGKLEP--LVIEVLPFEQLPEALRALKDRH-TRGKIVVT 324 (325)
T ss_pred hhHHHHHHHHHHHHHHHHCCCeee--ccceEEcHHHHHHHHHHHHcCC-ccceEEEE
Confidence 23577889999988764 3678899999999999998764 34455543
No 272
>PRK05993 short chain dehydrogenase; Provisional
Probab=97.69 E-value=0.00019 Score=66.66 Aligned_cols=82 Identities=21% Similarity=0.221 Sum_probs=61.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc--CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ--GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~~~d~ 392 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+.+.+...+ .-|..+.+++++.+.++.. +..+|+
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~-Vi~~~r~~~~~~~l~~~~~~~~--~~Dl~d~~~~~~~~~~~~~~~~g~id~ 79 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWR-VFATCRKEEDVAALEAEGLEAF--QLDYAEPESIAALVAQVLELSGGRLDA 79 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHCCceEE--EccCCCHHHHHHHHHHHHHHcCCCccE
Confidence 4578999999 99999999999999997 8999999888887776664432 2233445666666665532 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|++.|..
T Consensus 80 li~~Ag~~ 87 (277)
T PRK05993 80 LFNNGAYG 87 (277)
T ss_pred EEECCCcC
Confidence 99998743
No 273
>PRK07814 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00032 Score=64.52 Aligned_cols=83 Identities=22% Similarity=0.195 Sum_probs=59.4
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++++...|++ |++++|+.++.+.+.+ .+....+..-|..+.+++.+.+.++.. ..+
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGAD-VLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR 87 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999 99999999999999995 8889998777654422 243333323444456667666666533 247
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|++|+++|.
T Consensus 88 id~vi~~Ag~ 97 (263)
T PRK07814 88 LDIVVNNVGG 97 (263)
T ss_pred CCEEEECCCC
Confidence 9999999884
No 274
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=97.68 E-value=1.9e-05 Score=72.41 Aligned_cols=190 Identities=26% Similarity=0.378 Sum_probs=133.5
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEccCc--------------------
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVPEF-------------------- 60 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~~-------------------- 60 (408)
|.++++|++|++.+. +... ....+|.++|||++|+|+++|++++.|++||+|+..+..
T Consensus 6 v~~~~i~~~d~~~~~-g~~~-~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (271)
T cd05188 6 VEAAGLCGTDLHIRR-GGYP-PPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGGGILGE 83 (271)
T ss_pred EEEEEecchhHHHHc-CCCC-cCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCCCEecc
Confidence 468999999999884 3222 234568899999999999999999999999999976522
Q ss_pred ---------ccccCCcceeccceeeecccccCCCCCCcceEEEEeeee-ecCCeEEEEccCccccccccccccccC----
Q psy1413 61 ---------RNVCLSPILRRRFSLRFREQKPIEDPDDHEVLLEMHCVG-ICGSDVHYLTHGQIGDFRLSDPMIVGH---- 126 (408)
Q Consensus 61 ---------~~~~~~~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~~-~~g~~vlv~g~G~vG~~~i~~a~~~G~---- 126 (408)
...+...++..|+++++.+.+.++.++.+++........ ..+++++|+|+|++|++++++++..|.
T Consensus 84 ~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~~~~~~a~~~g~~v~~ 163 (271)
T cd05188 84 GLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIV 163 (271)
T ss_pred ccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEE
Confidence 233344556667777765555555555555422111122 357889999977799888877766553
Q ss_pred -------------------------------------cceeEEEccCc-h--HHHHhhccCCcEEEEEccCCCCccc-CH
Q psy1413 127 -------------------------------------EASGIVSKVGA-K--VKHLKATRPGGCLVIVGAGSQDVKI-PL 165 (408)
Q Consensus 127 -------------------------------------~~~~vv~~~g~-~--~~~~~~l~~gG~iv~~G~~~~~~~~-~~ 165 (408)
.++.++++++. . ...+++++++|+++.+|........ ..
T Consensus 164 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~ 243 (271)
T cd05188 164 TDRSDEKLELAKELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVGGTSGGPPLDDL 243 (271)
T ss_pred EcCCHHHHHHHHHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEccCCCCCCcccH
Confidence 23445555554 2 1568899999999999976654333 35
Q ss_pred HHHHhcCcEEEEeecCC-CcHHHHHHHH
Q psy1413 166 VLTMTKEIDIRGVFRYA-NDYPIALAMV 192 (408)
Q Consensus 166 ~~~~~~~~~l~g~~~~~-~~~~~~~~l~ 192 (408)
..++.+++++.+...+. .+++++++++
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 271 (271)
T cd05188 244 RRLLFKELTIIGSTGGTREDFEEALDLL 271 (271)
T ss_pred HHHHhcceEEEEeecCCHHHHHHHHhhC
Confidence 56789999999998876 6788887763
No 275
>PRK06500 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00031 Score=63.78 Aligned_cols=84 Identities=29% Similarity=0.273 Sum_probs=60.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
++.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+...+..+.++..+.+..+.. ..++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGAR-VAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 3578999999 99999999999999997 88888887766544 44565443333344455666665555433 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|+++|..
T Consensus 84 vi~~ag~~ 91 (249)
T PRK06500 84 VFINAGVA 91 (249)
T ss_pred EEECCCCC
Confidence 99999853
No 276
>PRK09072 short chain dehydrogenase; Provisional
Probab=97.68 E-value=0.00037 Score=64.02 Aligned_cols=84 Identities=19% Similarity=0.204 Sum_probs=60.2
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-c--CCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-M--GADATVLIDRNHSLEEISTHIIELLQGEQPD 391 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~--ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d 391 (408)
++.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.. + +....+...|..+.+++++.+..+...+++|
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id 82 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGAR-LLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGIN 82 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCC
Confidence 4578999999 99999999999999997 8999998877665532 2 3222222334445566666665554445799
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
.+|+++|..
T Consensus 83 ~lv~~ag~~ 91 (263)
T PRK09072 83 VLINNAGVN 91 (263)
T ss_pred EEEECCCCC
Confidence 999998864
No 277
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.67 E-value=0.00035 Score=63.52 Aligned_cols=83 Identities=19% Similarity=0.273 Sum_probs=59.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
+++++||+|+ |++|+.+++.+...|++ |++++++..+.+.+ ++.+........|..+.+++.+.+..+.. ..+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAK-LALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQ 82 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999 99999999999999997 88888887765443 33454433333344455666666666543 247
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|.+|+++|.
T Consensus 83 id~vi~~ag~ 92 (253)
T PRK08217 83 LNGLINNAGI 92 (253)
T ss_pred CCEEEECCCc
Confidence 8999999985
No 278
>PRK07478 short chain dehydrogenase; Provisional
Probab=97.67 E-value=0.00038 Score=63.52 Aligned_cols=84 Identities=20% Similarity=0.179 Sum_probs=62.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|++++++.+ ++.+....+...|..+.+++++.+.++.. ..+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAK-VVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGG 83 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 3578999999 99999999999999997 88889988776544 23354444434455566777777776643 247
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|+++|..
T Consensus 84 id~li~~ag~~ 94 (254)
T PRK07478 84 LDIAFNNAGTL 94 (254)
T ss_pred CCEEEECCCCC
Confidence 99999999863
No 279
>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit. In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.
Probab=97.67 E-value=0.00022 Score=70.73 Aligned_cols=81 Identities=30% Similarity=0.353 Sum_probs=60.3
Q ss_pred CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE-EecCCC----------CChHHHHHHHHH
Q psy1413 315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT-VLIDRN----------HSLEEISTHIIE 383 (408)
Q Consensus 315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~-i~~~~~----------~~~~~~~~~~~~ 383 (408)
.++++++|+|+|.+|+.++++++.+|++ |++++++.++++.++++|++.+ ++..+. .+ ++..+...+
T Consensus 162 vp~akVlViGaG~iGl~Aa~~ak~lGA~-V~v~d~~~~rle~a~~lGa~~v~v~~~e~g~~~~gYa~~~s-~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGAGVAGLAAIGAANSLGAI-VRAFDTRPEVKEQVQSMGAEFLELDFKEEGGSGDGYAKVMS-EEFIAAEME 239 (511)
T ss_pred CCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHcCCeEEeccccccccccccceeecC-HHHHHHHHH
Confidence 4568999999999999999999999998 9999999999999999998763 332110 01 122222233
Q ss_pred Hhc--CCCCceEEEcc
Q psy1413 384 LLQ--GEQPDKTIDCS 397 (408)
Q Consensus 384 ~~~--~~~~d~i~d~~ 397 (408)
... .+++|++|+|+
T Consensus 240 ~~~e~~~~~DIVI~Ta 255 (511)
T TIGR00561 240 LFAAQAKEVDIIITTA 255 (511)
T ss_pred HHHHHhCCCCEEEECc
Confidence 222 36799999999
No 280
>PRK08324 short chain dehydrogenase; Validated
Probab=97.66 E-value=0.00024 Score=74.43 Aligned_cols=119 Identities=25% Similarity=0.262 Sum_probs=77.8
Q ss_pred ccceeEEeeccceeeeCCCCCCcccccccchhhhhhhhhhccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec
Q psy1413 271 GNLSRYYRHAADFCHKLPDHVSLEEGALLEPLSVGVHACRRAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDI 349 (408)
Q Consensus 271 g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~~~~~~~~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~ 349 (408)
-++++|..+++..++.+ +..+.+++.... .......+++++||+|+ |++|+.+++.+...|++ |++++|
T Consensus 385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~l~~--------~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~-Vvl~~r 454 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI-EYWSLEQAKLQR--------MPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGAC-VVLADL 454 (681)
T ss_pred hhcCCccCCChhhhcce-eeehhhhhhhhc--------CCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCE-EEEEeC
Confidence 45667777776666665 445555443211 01122336789999998 99999999999999996 999999
Q ss_pred ChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCCceEEEcccc
Q psy1413 350 LEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQPDKTIDCSGI 399 (408)
Q Consensus 350 ~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~d~~g~ 399 (408)
+.++.+.+ ++++. ...+...|..+.+++.+.+.++.. ..++|++|+++|.
T Consensus 455 ~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~ 508 (681)
T PRK08324 455 DEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGI 508 (681)
T ss_pred CHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCC
Confidence 98877654 33443 222222334455666666665532 3479999999984
No 281
>PRK08265 short chain dehydrogenase; Provisional
Probab=97.64 E-value=0.00041 Score=63.69 Aligned_cols=83 Identities=19% Similarity=0.207 Sum_probs=61.9
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++++....+..-|..+.+++++.+.++.. ...+|+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 83 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGAR-VAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDI 83 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 3578999999 99999999999999996 89899988766554 44554333334455566777777766543 247999
Q ss_pred EEEcccc
Q psy1413 393 TIDCSGI 399 (408)
Q Consensus 393 i~d~~g~ 399 (408)
+|++.|.
T Consensus 84 lv~~ag~ 90 (261)
T PRK08265 84 LVNLACT 90 (261)
T ss_pred EEECCCC
Confidence 9999885
No 282
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=97.64 E-value=0.00037 Score=64.00 Aligned_cols=83 Identities=23% Similarity=0.229 Sum_probs=59.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
.+++++|+|+ |++|..+++.+...|++ |++++|+.++++.+++ .+.....-..|..+.++..+.++++.. ..++|+
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 82 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGAR-VAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDC 82 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999999 99999999999999997 8888998877766654 343222222344445666666665533 247999
Q ss_pred EEEcccc
Q psy1413 393 TIDCSGI 399 (408)
Q Consensus 393 i~d~~g~ 399 (408)
+|++.|.
T Consensus 83 li~~Ag~ 89 (262)
T TIGR03325 83 LIPNAGI 89 (262)
T ss_pred EEECCCC
Confidence 9999985
No 283
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=97.64 E-value=0.00042 Score=63.66 Aligned_cols=84 Identities=23% Similarity=0.229 Sum_probs=62.0
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
.++++||+|+ +++|..+++.+...|++ |++++|++++.+.+.+ ++....+-..|..+.+++++.+.++.. ...+|+
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~ 83 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGAR-VAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDC 83 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCE
Confidence 4678999999 99999999999999997 8889998887766543 443223333444556777777776543 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|+++|..
T Consensus 84 li~~ag~~ 91 (263)
T PRK06200 84 FVGNAGIW 91 (263)
T ss_pred EEECCCCc
Confidence 99999853
No 284
>PRK06198 short chain dehydrogenase; Provisional
Probab=97.62 E-value=0.00045 Score=63.26 Aligned_cols=85 Identities=19% Similarity=0.218 Sum_probs=60.4
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+++++|+|+ |++|..+++.+...|+++|++++|+.++.+ .+++.+....+...|..+.+++.+.+..... -.+
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999999 999999999999999988888988866554 2334454433333444455666666655432 136
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|++.|..
T Consensus 85 id~li~~ag~~ 95 (260)
T PRK06198 85 LDALVNAAGLT 95 (260)
T ss_pred CCEEEECCCcC
Confidence 99999999863
No 285
>PRK08267 short chain dehydrogenase; Provisional
Probab=97.61 E-value=0.00047 Score=63.21 Aligned_cols=82 Identities=26% Similarity=0.234 Sum_probs=59.7
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cC-CCeEEecCCCCChHHHHHHHHHHhc--CCCCce
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MG-ADATVLIDRNHSLEEISTHIIELLQ--GEQPDK 392 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~g-a~~~i~~~~~~~~~~~~~~~~~~~~--~~~~d~ 392 (408)
+++||+|+ |++|..+++.+...|++ |++++|+.++++.+.+ .+ ....+-.-|..+.+++.+.+..+.. .+++|+
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~ 80 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWR-VGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDV 80 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCE
Confidence 47999999 99999999999999997 8888998888766633 32 2222223344456777777766543 357999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+++++|..
T Consensus 81 vi~~ag~~ 88 (260)
T PRK08267 81 LFNNAGIL 88 (260)
T ss_pred EEECCCCC
Confidence 99999864
No 286
>PRK07904 short chain dehydrogenase; Provisional
Probab=97.60 E-value=0.00059 Score=62.41 Aligned_cols=86 Identities=20% Similarity=0.196 Sum_probs=59.0
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-HHH----HHHcCC-CeEEecCCCCChHHHHHHHHHHhcC
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-LKT----AKEMGA-DATVLIDRNHSLEEISTHIIELLQG 387 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-~~~----~~~~ga-~~~i~~~~~~~~~~~~~~~~~~~~~ 387 (408)
..+.++||+|+ |++|+.+++.+...|..+|++++|+.++ ++. +++.+. ...+..-|..+.+++++.+.++...
T Consensus 6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~ 85 (253)
T PRK07904 6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG 85 (253)
T ss_pred CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence 45678999999 9999999998887863348889998765 432 333343 2223233444556677667666544
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
.++|+++++.|..
T Consensus 86 g~id~li~~ag~~ 98 (253)
T PRK07904 86 GDVDVAIVAFGLL 98 (253)
T ss_pred CCCCEEEEeeecC
Confidence 5799999988864
No 287
>PRK07831 short chain dehydrogenase; Provisional
Probab=97.57 E-value=0.0006 Score=62.60 Aligned_cols=86 Identities=28% Similarity=0.348 Sum_probs=61.1
Q ss_pred cCCCCEEEEEec-c-hhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----H-cCCCeE-EecCCCCChHHHHHHHHHHh
Q psy1413 314 VTLGSKVLITGA-G-PIGLVTLLTARALGASRVVITDILEHKLKTAK----E-MGADAT-VLIDRNHSLEEISTHIIELL 385 (408)
Q Consensus 314 ~~~~~~~lv~G~-G-~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~-~ga~~~-i~~~~~~~~~~~~~~~~~~~ 385 (408)
+..++++||+|+ | ++|..+++.+...|++ |++++++.++++... + +|...+ +...|..+.+++.+.+.++.
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~ 92 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGAR-VVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAV 92 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHH
Confidence 355789999998 7 8999999999999997 888888877655432 2 453332 22344455667777776653
Q ss_pred c-CCCCceEEEcccch
Q psy1413 386 Q-GEQPDKTIDCSGIE 400 (408)
Q Consensus 386 ~-~~~~d~i~d~~g~~ 400 (408)
. ..++|++|++.|..
T Consensus 93 ~~~g~id~li~~ag~~ 108 (262)
T PRK07831 93 ERLGRLDVLVNNAGLG 108 (262)
T ss_pred HHcCCCCEEEECCCCC
Confidence 3 24799999999853
No 288
>cd05195 enoyl_red enoyl reductase of polyketide synthase. Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase
Probab=97.57 E-value=5.8e-05 Score=69.77 Aligned_cols=216 Identities=19% Similarity=0.210 Sum_probs=146.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCCCCCCCCEEEEcc-----CcccccCCcceecccee
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVKHLKVDNQTRFVP-----EFRNVCLSPILRRRFSL 75 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~-----~~~~~~~~~~~~~p~~~ 75 (408)
|.++|+|++|++... +. . ..+|.++|||++|+|+++|++++.+++||+|.... ++...+...++..|+.+
T Consensus 7 v~~~~~~~~d~~~~~-g~---~-~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~p~~~ 81 (293)
T cd05195 7 VKAAGLNFRDVLVAL-GL---L-PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARLVVKIPDSL 81 (293)
T ss_pred EEEEecCHHHHHHHh-CC---C-CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEecCcccceEEechhheEeCCCCC
Confidence 468999999999884 32 2 24588999999999999999999999999998753 34455666777788877
Q ss_pred eecccccCCCCCCcceEEEEeeeee-cCCeEEEEc-cCccccccccccccccCcc-------------------------
Q psy1413 76 RFREQKPIEDPDDHEVLLEMHCVGI-CGSDVHYLT-HGQIGDFRLSDPMIVGHEA------------------------- 128 (408)
Q Consensus 76 ~~~~~~~lp~~~~~~~~~~~~~~~~-~g~~vlv~g-~G~vG~~~i~~a~~~G~~~------------------------- 128 (408)
++.+...++.+..+++........+ .+++++|+| .|.+|++++++++.+|+..
T Consensus 82 ~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (293)
T cd05195 82 SFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHIFS 161 (293)
T ss_pred CHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhCCCcceEee
Confidence 7755554444444433221111112 478888986 7899988888877666532
Q ss_pred -------------------eeEEEccCch--HHHHhhccCCcEEEEEccCCCC--cccCHHHHHhcCcEEEEeec-----
Q psy1413 129 -------------------SGIVSKVGAK--VKHLKATRPGGCLVIVGAGSQD--VKIPLVLTMTKEIDIRGVFR----- 180 (408)
Q Consensus 129 -------------------~~vv~~~g~~--~~~~~~l~~gG~iv~~G~~~~~--~~~~~~~~~~~~~~l~g~~~----- 180 (408)
+.+++++|.. ...+++++++|+++.+|..... ..++... +.+++.+.....
T Consensus 162 ~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 240 (293)
T cd05195 162 SRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKLGMRP-FLRNVSFSSVDLDQLAR 240 (293)
T ss_pred cCchhHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccCCccchhh-hccCCeEEEEeHHHHhh
Confidence 2223333322 1467889999999999976532 2233322 334555554321
Q ss_pred C-----CCcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCC
Q psy1413 181 Y-----ANDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAG 224 (408)
Q Consensus 181 ~-----~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~ 224 (408)
. .+.+.+++++++++++. +++++.++++++.++|+.+.+++.
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~ 287 (293)
T cd05195 241 ERPELLRELLREVLELLEAGVLK--PLPPTVVPSASEIDAFRLMQSGKH 287 (293)
T ss_pred hChHHHHHHHHHHHHHHHCCCcc--cCCCeeechhhHHHHHHHHhcCCC
Confidence 1 13477888999999875 567888999999999999997653
No 289
>PRK07825 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00052 Score=63.38 Aligned_cols=82 Identities=27% Similarity=0.240 Sum_probs=59.6
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT 393 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i 393 (408)
+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++++....+ .-|..+.+++.+.+.++.. ..++|++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~-~~D~~~~~~~~~~~~~~~~~~~~id~l 82 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGAR-VAIGDLDEALAKETAAELGLVVGG-PLDVTDPASFAAFLDAVEADLGPIDVL 82 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccceEE-EccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999 99999999999999997 88888988877654 444422222 2334456677666666543 2579999
Q ss_pred EEcccch
Q psy1413 394 IDCSGIE 400 (408)
Q Consensus 394 ~d~~g~~ 400 (408)
+++.|..
T Consensus 83 i~~ag~~ 89 (273)
T PRK07825 83 VNNAGVM 89 (273)
T ss_pred EECCCcC
Confidence 9999853
No 290
>PRK07890 short chain dehydrogenase; Provisional
Probab=97.56 E-value=0.00065 Score=62.06 Aligned_cols=85 Identities=16% Similarity=0.183 Sum_probs=61.0
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
..+.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+.+ .+.....-..|..+.+++++.+.+... -.
T Consensus 3 l~~k~vlItGa~~~IG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (258)
T PRK07890 3 LKGKVVVVSGVGPGLGRTLAVRAARAGAD-VVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFG 81 (258)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 45688999999 99999999999999996 8888988776554422 243333333444556777777766533 24
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
++|++|++.|..
T Consensus 82 ~~d~vi~~ag~~ 93 (258)
T PRK07890 82 RVDALVNNAFRV 93 (258)
T ss_pred CccEEEECCccC
Confidence 689999999853
No 291
>PRK07062 short chain dehydrogenase; Provisional
Probab=97.55 E-value=0.00068 Score=62.29 Aligned_cols=84 Identities=23% Similarity=0.196 Sum_probs=59.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----H-cC-CCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----E-MG-ADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~-~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ +++|..+++.+...|++ |++++|+.++++.+. + .+ .....-.-|..+.+++.+.+.++.. .
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGAS-VAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARF 85 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhc
Confidence 3678999999 99999999999999997 888999887765432 2 11 2222223344556777776666543 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
.++|++++++|..
T Consensus 86 g~id~li~~Ag~~ 98 (265)
T PRK07062 86 GGVDMLVNNAGQG 98 (265)
T ss_pred CCCCEEEECCCCC
Confidence 4799999999853
No 292
>PRK05866 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00072 Score=63.30 Aligned_cols=83 Identities=24% Similarity=0.286 Sum_probs=59.3
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
+.+++|+|+ |++|..+++.+...|++ |++++|+.++++.+. +.+.+..+-.-|..+.+++.+.+..+.. ..++
T Consensus 40 ~k~vlItGasggIG~~la~~La~~G~~-Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 40 GKRILLTGASSGIGEAAAEQFARRGAT-VVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999 99999999999999987 899999987765442 2343333333344455666666665432 2479
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|++|+++|..
T Consensus 119 d~li~~AG~~ 128 (293)
T PRK05866 119 DILINNAGRS 128 (293)
T ss_pred CEEEECCCCC
Confidence 9999999864
No 293
>PRK05693 short chain dehydrogenase; Provisional
Probab=97.54 E-value=0.00063 Score=62.92 Aligned_cols=79 Identities=23% Similarity=0.143 Sum_probs=59.1
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEEE
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTID 395 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~d 395 (408)
+++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+.+...+ .-|..+.+++++.+.++.. ..++|++|+
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~--~~Dl~~~~~~~~~~~~~~~~~~~id~vi~ 78 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYE-VWATARKAEDVEALAAAGFTAV--QLDVNDGAALARLAEELEAEHGGLDVLIN 78 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHCCCeEE--EeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 47899999 99999999999999987 8889999888777666554332 1223345677766666533 347999999
Q ss_pred cccc
Q psy1413 396 CSGI 399 (408)
Q Consensus 396 ~~g~ 399 (408)
+.|.
T Consensus 79 ~ag~ 82 (274)
T PRK05693 79 NAGY 82 (274)
T ss_pred CCCC
Confidence 9985
No 294
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=97.54 E-value=0.00072 Score=61.91 Aligned_cols=83 Identities=24% Similarity=0.281 Sum_probs=60.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+. ..+....+...|..+.+++.+.+.++.. ..+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~ 89 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGAR-VVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH 89 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4688999999 99999999999999996 888889877765442 2333333334455566777766666543 247
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|.+|+++|.
T Consensus 90 id~vi~~ag~ 99 (259)
T PRK08213 90 VDILVNNAGA 99 (259)
T ss_pred CCEEEECCCC
Confidence 9999999885
No 295
>PRK07677 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.0007 Score=61.73 Aligned_cols=83 Identities=22% Similarity=0.216 Sum_probs=59.5
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+. +.+....+-.-|..+.+++++.+.++.. ..++
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGAN-VVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRI 79 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCc
Confidence 468999999 99999999999999996 888998877655432 2333333333344566777777766543 2479
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|.+|++.|..
T Consensus 80 d~lI~~ag~~ 89 (252)
T PRK07677 80 DALINNAAGN 89 (252)
T ss_pred cEEEECCCCC
Confidence 9999999853
No 296
>PRK05867 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00067 Score=61.89 Aligned_cols=84 Identities=21% Similarity=0.203 Sum_probs=60.0
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+. +.+.......-|..+.+++.+.+.++.. ..+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 86 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQ-VAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGG 86 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3678999999 99999999999999997 888889877765442 2343332223344556677776666543 247
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|+++++.|..
T Consensus 87 id~lv~~ag~~ 97 (253)
T PRK05867 87 IDIAVCNAGII 97 (253)
T ss_pred CCEEEECCCCC
Confidence 99999999853
No 297
>PRK08628 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00078 Score=61.62 Aligned_cols=83 Identities=17% Similarity=0.139 Sum_probs=60.6
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH---HcCCCeEEecCCCCChHHHHHHHHHHhcC-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK---EMGADATVLIDRNHSLEEISTHIIELLQG-EQP 390 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~---~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~~ 390 (408)
.+.++||+|+ |++|..+++.+...|++ +++++|+.++.+..+ +.+....+-..|..+.+++.+.+.++... .++
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAI-PVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRI 84 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCc-EEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 3578999999 99999999999999998 777888776654333 34544333345555667777777766442 479
Q ss_pred ceEEEcccc
Q psy1413 391 DKTIDCSGI 399 (408)
Q Consensus 391 d~i~d~~g~ 399 (408)
|.+|+++|.
T Consensus 85 d~vi~~ag~ 93 (258)
T PRK08628 85 DGLVNNAGV 93 (258)
T ss_pred CEEEECCcc
Confidence 999999985
No 298
>PRK07109 short chain dehydrogenase; Provisional
Probab=97.53 E-value=0.00074 Score=64.50 Aligned_cols=84 Identities=20% Similarity=0.174 Sum_probs=62.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.+++|+|+ |++|..+++.+...|++ |++++|++++++.+ ++.|....+-.-|..+.+++++.+.++.. -.+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~-Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~ 85 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAK-VVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGP 85 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCC
Confidence 4578999999 99999999999999997 88889988776543 34565554444455566777776665533 247
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|+++|..
T Consensus 86 iD~lInnAg~~ 96 (334)
T PRK07109 86 IDTWVNNAMVT 96 (334)
T ss_pred CCEEEECCCcC
Confidence 99999999853
No 299
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.52 E-value=0.00079 Score=61.14 Aligned_cols=83 Identities=24% Similarity=0.269 Sum_probs=60.6
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc--CCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM--GADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~--ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
.+.++||+|+ |++|..+++.+...|.+ |++++|+.++.+.+ ..+ +....+..-|..+.+++.+.+.+... ..++
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 82 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGAR-VVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSV 82 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3568999999 99999999999999998 99999998776554 222 23333334455566777777666522 3479
Q ss_pred ceEEEcccc
Q psy1413 391 DKTIDCSGI 399 (408)
Q Consensus 391 d~i~d~~g~ 399 (408)
|++|++.|.
T Consensus 83 d~vi~~ag~ 91 (251)
T PRK07231 83 DILVNNAGT 91 (251)
T ss_pred CEEEECCCC
Confidence 999999985
No 300
>PRK07576 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00086 Score=61.71 Aligned_cols=83 Identities=14% Similarity=0.192 Sum_probs=60.4
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
++.++||+|+ |++|..+++.+...|++ |++++|+.++.+.. .+.+....+..-|..+.+++.+.+.++.. .++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~ 86 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGAN-VAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP 86 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 5679999999 99999999999999998 88899887665432 23343333333444556777777777643 247
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|++|++.|.
T Consensus 87 iD~vi~~ag~ 96 (264)
T PRK07576 87 IDVLVSGAAG 96 (264)
T ss_pred CCEEEECCCC
Confidence 8999999874
No 301
>PRK06194 hypothetical protein; Provisional
Probab=97.52 E-value=0.00082 Score=62.55 Aligned_cols=83 Identities=23% Similarity=0.289 Sum_probs=59.7
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH---cCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE---MGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~---~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
+.++||+|+ |++|..+++.+...|++ |++++++.++++.. ++ .+....+-.-|..+.+++++.+..+.. ..++
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i 84 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMK-LVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV 84 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCE-EEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999 99999999999999997 88889887665433 22 244433334455566777776666533 2468
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|++|++.|..
T Consensus 85 d~vi~~Ag~~ 94 (287)
T PRK06194 85 HLLFNNAGVG 94 (287)
T ss_pred CEEEECCCCC
Confidence 9999999864
No 302
>PRK05876 short chain dehydrogenase; Provisional
Probab=97.52 E-value=0.00082 Score=62.29 Aligned_cols=84 Identities=27% Similarity=0.290 Sum_probs=61.6
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++++.++++.+ ++.|....+...|..+.+++++.+.++.. ..+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~-Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 83 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGAR-VVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGH 83 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999 99999999999999997 88888887766543 23354444444555666777777766533 246
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|++.|..
T Consensus 84 id~li~nAg~~ 94 (275)
T PRK05876 84 VDVVFSNAGIV 94 (275)
T ss_pred CCEEEECCCcC
Confidence 89999999853
No 303
>PRK08177 short chain dehydrogenase; Provisional
Probab=97.51 E-value=0.00059 Score=61.10 Aligned_cols=80 Identities=18% Similarity=0.084 Sum_probs=59.6
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~ 396 (408)
.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+++++-...+ ..|..+.+++++.+.++. ..++|++|++
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~-~~D~~d~~~~~~~~~~~~-~~~id~vi~~ 78 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQ-VTATVRGPQQDTALQALPGVHIE-KLDMNDPASLDQLLQRLQ-GQRFDLLFVN 78 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCE-EEEEeCCCcchHHHHhccccceE-EcCCCCHHHHHHHHHHhh-cCCCCEEEEc
Confidence 46899999 99999999999999996 99999988777666555422222 234445667777776664 3579999999
Q ss_pred ccch
Q psy1413 397 SGIE 400 (408)
Q Consensus 397 ~g~~ 400 (408)
+|..
T Consensus 79 ag~~ 82 (225)
T PRK08177 79 AGIS 82 (225)
T ss_pred Cccc
Confidence 8864
No 304
>PRK08862 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.0008 Score=60.48 Aligned_cols=83 Identities=22% Similarity=0.227 Sum_probs=60.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcC-C-
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQG-E- 388 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~- 388 (408)
.+.+++|+|+ +++|+.+++.+...|++ |++++|+.++++.+ ++.+.....-..|..+.+++++.+.++... .
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~-V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGAT-LILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNR 82 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999 99999999999999998 88889988776543 334544332223445567777777766432 3
Q ss_pred CCceEEEcccc
Q psy1413 389 QPDKTIDCSGI 399 (408)
Q Consensus 389 ~~d~i~d~~g~ 399 (408)
.+|++|++.|.
T Consensus 83 ~iD~li~nag~ 93 (227)
T PRK08862 83 APDVLVNNWTS 93 (227)
T ss_pred CCCEEEECCcc
Confidence 79999999974
No 305
>PRK12939 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00085 Score=60.89 Aligned_cols=84 Identities=19% Similarity=0.245 Sum_probs=59.8
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcC-CC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQG-EQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~ 389 (408)
.+.+++|+|+ |++|+.+++.+...|++ |++++|++++.+.+ ++.+....+..-|..+.+++++.+.++... .+
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGAT-VAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGG 84 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3678999999 99999999999999997 88888887765543 223443333334445566776666655432 47
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|+++|..
T Consensus 85 id~vi~~ag~~ 95 (250)
T PRK12939 85 LDGLVNNAGIT 95 (250)
T ss_pred CCEEEECCCCC
Confidence 99999999863
No 306
>PRK07063 short chain dehydrogenase; Provisional
Probab=97.50 E-value=0.00086 Score=61.44 Aligned_cols=84 Identities=20% Similarity=0.232 Sum_probs=59.6
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-Hc-----CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EM-----GADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ |++|..+++.+...|++ |++++|++++.+.+. ++ +....+-..|..+.+++.+.+.++.. .
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 84 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAA-VALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAF 84 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 3578999999 99999999999999997 888899877765432 22 22222333444556667766666543 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
+++|.+|+++|..
T Consensus 85 g~id~li~~ag~~ 97 (260)
T PRK07063 85 GPLDVLVNNAGIN 97 (260)
T ss_pred CCCcEEEECCCcC
Confidence 4799999999853
No 307
>PRK06182 short chain dehydrogenase; Validated
Probab=97.49 E-value=0.00071 Score=62.55 Aligned_cols=81 Identities=19% Similarity=0.168 Sum_probs=60.6
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI 394 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~ 394 (408)
+.+++|+|+ |++|+.+++.+...|++ |++++|+.++++.+.+.+...+ .-|..+.+++++.+.++.. ..++|++|
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~G~~-V~~~~r~~~~l~~~~~~~~~~~--~~Dv~~~~~~~~~~~~~~~~~~~id~li 79 (273)
T PRK06182 3 KKVALVTGASSGIGKATARRLAAQGYT-VYGAARRVDKMEDLASLGVHPL--SLDVTDEASIKAAVDTIIAEEGRIDVLV 79 (273)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhCCCeEE--EeeCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 578999999 99999999999999997 8889999888776655554332 1233456777777766533 34799999
Q ss_pred Ecccch
Q psy1413 395 DCSGIE 400 (408)
Q Consensus 395 d~~g~~ 400 (408)
++.|..
T Consensus 80 ~~ag~~ 85 (273)
T PRK06182 80 NNAGYG 85 (273)
T ss_pred ECCCcC
Confidence 999854
No 308
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=97.49 E-value=0.00095 Score=60.61 Aligned_cols=84 Identities=20% Similarity=0.206 Sum_probs=59.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh--HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK--LKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
.++++||+|+ |++|..+++.+...|++ |++++|+... .+.+++.+.......-|..+.+++.+.+.++.. ..++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGAD-IVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999999 99999999999999997 8888876521 233444554433334455556777777766543 24799
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
++++++|..
T Consensus 83 ~li~~ag~~ 91 (248)
T TIGR01832 83 ILVNNAGII 91 (248)
T ss_pred EEEECCCCC
Confidence 999999864
No 309
>PRK12829 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00063 Score=62.35 Aligned_cols=85 Identities=20% Similarity=0.197 Sum_probs=59.3
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCC--eEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGAD--ATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~--~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
-++.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+.... ..+..-|..+.+++.+.+.++.. -.++
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 87 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGAR-VHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGL 87 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999999 99999999999999997 89999987776655432211 12223333445555555554422 2479
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|.+|++.|..
T Consensus 88 d~vi~~ag~~ 97 (264)
T PRK12829 88 DVLVNNAGIA 97 (264)
T ss_pred CEEEECCCCC
Confidence 9999999864
No 310
>PRK06172 short chain dehydrogenase; Provisional
Probab=97.49 E-value=0.00097 Score=60.79 Aligned_cols=84 Identities=25% Similarity=0.282 Sum_probs=60.2
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++.+........|..+.+++.+.+.++.. ..+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 84 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAK-VVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGR 84 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999 99999999999999997 88899987765433 33454433333455556677766665532 247
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|++.|..
T Consensus 85 id~li~~ag~~ 95 (253)
T PRK06172 85 LDYAFNNAGIE 95 (253)
T ss_pred CCEEEECCCCC
Confidence 89999999853
No 311
>PRK05854 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00091 Score=63.26 Aligned_cols=84 Identities=23% Similarity=0.222 Sum_probs=60.2
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH----c-CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE----M-GADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~----~-ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.+.+++|+|+ +++|..+++.+...|++ |++++|+.++.+.+ ++ . +....+..-|..+.+++++.+.++.. .
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~-Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~ 91 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAE-VILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG 91 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC
Confidence 3578999999 99999999999999997 88889987765433 22 1 22333333455566777777766543 3
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
.++|++|+++|..
T Consensus 92 ~~iD~li~nAG~~ 104 (313)
T PRK05854 92 RPIHLLINNAGVM 104 (313)
T ss_pred CCccEEEECCccc
Confidence 4799999999864
No 312
>PRK06138 short chain dehydrogenase; Provisional
Probab=97.48 E-value=0.00097 Score=60.65 Aligned_cols=84 Identities=21% Similarity=0.195 Sum_probs=59.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-c--CCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-M--GADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~--ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
.+++++|+|+ |++|..+++.+...|++ |++++|+.++.+...+ . +....+..-|..+.+++.+.+.++.. ..++
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~i 82 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGAR-VVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRL 82 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCe-EEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999 99999999999999987 8888888766544322 2 43333333444556677666665533 2479
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|.+|+++|..
T Consensus 83 d~vi~~ag~~ 92 (252)
T PRK06138 83 DVLVNNAGFG 92 (252)
T ss_pred CEEEECCCCC
Confidence 9999999853
No 313
>PRK06180 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.00099 Score=61.75 Aligned_cols=83 Identities=19% Similarity=0.093 Sum_probs=60.3
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHc-CCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEM-GADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT 393 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i 393 (408)
+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+.+. +........|..+.+++.+.+.++.. ..++|++
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~-V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v 82 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHR-VVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL 82 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCE-EEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 568999999 99999999999999997 89999998887666443 32222223344455666666665533 2469999
Q ss_pred EEcccch
Q psy1413 394 IDCSGIE 400 (408)
Q Consensus 394 ~d~~g~~ 400 (408)
|++.|..
T Consensus 83 v~~ag~~ 89 (277)
T PRK06180 83 VNNAGYG 89 (277)
T ss_pred EECCCcc
Confidence 9999864
No 314
>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast. This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi
Probab=97.47 E-value=0.00011 Score=70.73 Aligned_cols=226 Identities=18% Similarity=0.103 Sum_probs=143.7
Q ss_pred CCeeeecccchhhhhcCCCCCCCCCCCccccCCccEEEEEeCCCCC-CCCCCCEEEEcc-----------CcccccCC--
Q psy1413 1 MHCVGICGSDVHYLTHGQIGDFRLSDPMIVGHEASGIVSKVGAKVK-HLKVDNQTRFVP-----------EFRNVCLS-- 66 (408)
Q Consensus 1 V~a~gic~sDl~~~~~g~~~~~~~~~P~i~GhE~~G~Vv~vG~~v~-~~~vGdrV~~~~-----------~~~~~~~~-- 66 (408)
|.++|+|++|+..+. ++.. ....+|.++|||++|+|+++|++|+ .|++||||+... ++......
T Consensus 35 v~~~~~~~~d~~~~~-~~~~-~~~~~~~~~g~e~~G~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~ 112 (352)
T cd08247 35 VHAAALNPVDLKLYN-SYTF-HFKVKEKGLGRDYSGVIVKVGSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKD 112 (352)
T ss_pred EEEEecChHhHHHhc-cccc-ccccCCCccCceeEEEEEEeCcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccc
Confidence 468999999998873 3211 1112477899999999999999998 899999998642 22333433
Q ss_pred --cceeccceeeecccccCCCCCCcceEEEEeee--eecCCeEEEEcc-Cccccccccccccc-cC--------------
Q psy1413 67 --PILRRRFSLRFREQKPIEDPDDHEVLLEMHCV--GICGSDVHYLTH-GQIGDFRLSDPMIV-GH-------------- 126 (408)
Q Consensus 67 --~~~~~p~~~~~~~~~~lp~~~~~~~~~~~~~~--~~~g~~vlv~g~-G~vG~~~i~~a~~~-G~-------------- 126 (408)
.++..|+.+++.+.+.++....+++.+..... --.+++++|+|+ +.+|++++++++.+ |.
T Consensus 113 ~~~~~~lP~~l~~~~aa~~~~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~~~~~~~ 192 (352)
T cd08247 113 KKSITRKPENISLEEAAAWPLVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCSSRSAEL 192 (352)
T ss_pred cceeEECCCCCCHHHHHHhHHHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeChhHHHH
Confidence 56778888887555555554444442211111 124788989885 57888887777754 22
Q ss_pred --------------------------------cceeEEEccCch---HHHHhhcc---CCcEEEEEc-cCCCCcc-----
Q psy1413 127 --------------------------------EASGIVSKVGAK---VKHLKATR---PGGCLVIVG-AGSQDVK----- 162 (408)
Q Consensus 127 --------------------------------~~~~vv~~~g~~---~~~~~~l~---~gG~iv~~G-~~~~~~~----- 162 (408)
.++.+++++|.. ...+++++ ++|+++.++ ....+..
T Consensus 193 ~~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~ 272 (352)
T cd08247 193 NKKLGADHFIDYDAHSGVKLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFN 272 (352)
T ss_pred HHHhCCCEEEecCCCcccchHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhh
Confidence 122233333331 14677888 999999874 3221111
Q ss_pred ------cCHH----HHHhcCcEEEEeecCC--CcHHHHHHHHHcCCCCCCCceeeeeccchHHHHHHHHHcCCCCceEEE
Q psy1413 163 ------IPLV----LTMTKEIDIRGVFRYA--NDYPIALAMVASGKVDVKKLITHNYLLEDTLHAFETAKTGAGNAIKVM 230 (408)
Q Consensus 163 ------~~~~----~~~~~~~~l~g~~~~~--~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~a~~~~~~~~~~~~kvv 230 (408)
+... ...++..++....... ..++++++++.++.++ +++++.++++++++||+.+.+++ ..+|++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvv 349 (352)
T cd08247 273 SWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIEKCAELIADGKVK--PPIDSVYPFEDYKEAFERLKSNR-AKGKVV 349 (352)
T ss_pred hccccchhhhhhhhhhcCCCcceEEEEecCCHHHHHHHHHHHhCCCeE--eeeccEecHHHHHHHHHHHHcCC-CCCcEE
Confidence 1111 2224444544333222 3578899999999875 44789999999999999998764 344555
Q ss_pred E
Q psy1413 231 I 231 (408)
Q Consensus 231 i 231 (408)
+
T Consensus 350 i 350 (352)
T cd08247 350 I 350 (352)
T ss_pred E
Confidence 4
No 315
>PRK06114 short chain dehydrogenase; Provisional
Probab=97.47 E-value=0.001 Score=60.79 Aligned_cols=84 Identities=19% Similarity=0.233 Sum_probs=58.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
.+.++||+|+ +++|..+++.+...|++ |++++|+.+ ..+ .++..+.....-..|..+.+++++.+.++.. ..
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g 85 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGAD-VALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELG 85 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4678999999 99999999999999997 777887643 222 2333454333333445556777777766543 35
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
++|.+|++.|..
T Consensus 86 ~id~li~~ag~~ 97 (254)
T PRK06114 86 ALTLAVNAAGIA 97 (254)
T ss_pred CCCEEEECCCCC
Confidence 799999999853
No 316
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.46 E-value=0.001 Score=60.76 Aligned_cols=84 Identities=18% Similarity=0.222 Sum_probs=60.2
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh--HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK--LKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
.++++||+|+ +++|..+++.+...|++ |++++++... .+.+++.+....+..-|..+.+++++.+.++.. ..++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGAD-IVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 4688999999 99999999999999998 7777775422 233455565444334455566777777776543 24799
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
+++++.|..
T Consensus 86 ~lv~~ag~~ 94 (251)
T PRK12481 86 ILINNAGII 94 (251)
T ss_pred EEEECCCcC
Confidence 999999853
No 317
>PRK08251 short chain dehydrogenase; Provisional
Probab=97.46 E-value=0.0011 Score=60.19 Aligned_cols=83 Identities=22% Similarity=0.219 Sum_probs=59.0
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----c--CCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----M--GADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~--ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
+.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+.+ . +....+-.-|..+.+++.+.+.++.. ..
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRD-LALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELG 80 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 467999999 99999999999999975 8888998877654422 1 33333333444556677776666543 35
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
++|++|++.|..
T Consensus 81 ~id~vi~~ag~~ 92 (248)
T PRK08251 81 GLDRVIVNAGIG 92 (248)
T ss_pred CCCEEEECCCcC
Confidence 799999999853
No 318
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.46 E-value=0.00098 Score=60.06 Aligned_cols=83 Identities=25% Similarity=0.227 Sum_probs=59.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
.+++++|+|+ |++|..+++.+...|++ |++++|++++.+.+ ++... ...+...|..+.+++++.+.++.. ..++
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 82 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQ-VCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAI 82 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999 99999999999999996 89999988877655 33321 122223444556667766665543 2478
Q ss_pred ceEEEcccc
Q psy1413 391 DKTIDCSGI 399 (408)
Q Consensus 391 d~i~d~~g~ 399 (408)
|.++++.|.
T Consensus 83 d~ii~~ag~ 91 (238)
T PRK05786 83 DGLVVTVGG 91 (238)
T ss_pred CEEEEcCCC
Confidence 999999875
No 319
>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional
Probab=97.46 E-value=0.00037 Score=71.47 Aligned_cols=85 Identities=18% Similarity=0.357 Sum_probs=61.7
Q ss_pred CcCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC---------------------hhhHHHHHHcCCCeEEecCCC
Q psy1413 313 GVTLGSKVLITGAGPIGLVTLLTARALGASRVVITDIL---------------------EHKLKTAKEMGADATVLIDRN 371 (408)
Q Consensus 313 ~~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~---------------------~~~~~~~~~~ga~~~i~~~~~ 371 (408)
..+++++|+|+|+|+.|+++++.++.+|++ |+++++. ..+++.++++|++..++....
T Consensus 133 ~~~~g~~V~VIGaGpaGL~aA~~l~~~G~~-V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~~~Gv~~~~~~~~~ 211 (564)
T PRK12771 133 APDTGKRVAVIGGGPAGLSAAYHLRRMGHA-VTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRILDLGVEVRLGVRVG 211 (564)
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCe-EEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHHHCCCEEEeCCEEC
Confidence 357889999999999999999999999997 8878742 345677888999887765321
Q ss_pred CChHHHHHHHHHHhcCCCCceEEEcccchhhhhh
Q psy1413 372 HSLEEISTHIIELLQGEQPDKTIDCSGIESTIKL 405 (408)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~~~~ 405 (408)
.+. ... .+ ..++|.+|+++|......+
T Consensus 212 ~~~-~~~-~~-----~~~~D~Vi~AtG~~~~~~~ 238 (564)
T PRK12771 212 EDI-TLE-QL-----EGEFDAVFVAIGAQLGKRL 238 (564)
T ss_pred CcC-CHH-HH-----HhhCCEEEEeeCCCCCCcC
Confidence 111 111 11 1369999999998765443
No 320
>PRK06720 hypothetical protein; Provisional
Probab=97.46 E-value=0.0014 Score=55.86 Aligned_cols=84 Identities=23% Similarity=0.237 Sum_probs=59.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.+++|+|+ +++|..++..+...|++ |++++++.++.+.. ++.+....+-..|..+.+++.+.+.++.. ..+
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~-V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~ 93 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAK-VIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSR 93 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999 99999999999999987 88888876655332 23354433333444556777776665432 347
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+++++|..
T Consensus 94 iDilVnnAG~~ 104 (169)
T PRK06720 94 IDMLFQNAGLY 104 (169)
T ss_pred CCEEEECCCcC
Confidence 99999999853
No 321
>PRK06841 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.00099 Score=60.76 Aligned_cols=84 Identities=19% Similarity=0.236 Sum_probs=59.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC-CCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMG-ADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.+..+...+.. .......-|..+.+++.+.+.++.. ..++|.
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGAR-VALLDRSEDVAEVAAQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4678999999 99999999999999997 888998876655444432 2222223344456677666665532 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|+++|..
T Consensus 93 vi~~ag~~ 100 (255)
T PRK06841 93 LVNSAGVA 100 (255)
T ss_pred EEECCCCC
Confidence 99999853
No 322
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=97.45 E-value=0.00092 Score=61.22 Aligned_cols=83 Identities=28% Similarity=0.273 Sum_probs=58.2
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH---HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA---KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~---~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|++...+.. ++.+.+..+...|..+.+++.+.+.++.. ..++
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGAR-VVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999 99999999999999997 88888875433322 23354433333344456677777766543 2479
Q ss_pred ceEEEcccc
Q psy1413 391 DKTIDCSGI 399 (408)
Q Consensus 391 d~i~d~~g~ 399 (408)
|++|+++|.
T Consensus 86 d~lv~nAg~ 94 (260)
T PRK12823 86 DVLINNVGG 94 (260)
T ss_pred eEEEECCcc
Confidence 999999984
No 323
>PRK05717 oxidoreductase; Validated
Probab=97.45 E-value=0.0011 Score=60.54 Aligned_cols=84 Identities=24% Similarity=0.248 Sum_probs=60.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcC-CCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQG-EQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~~d~ 392 (408)
.+.+++|+|+ |++|..+++.+...|++ |++++++..+.+.+ ++++....+..-|..+.+++.+.+.++... ..+|+
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~ 87 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQ-VVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA 87 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence 3578999999 99999999999999997 88888876665443 445543333344555566776666665432 36899
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|++.|..
T Consensus 88 li~~ag~~ 95 (255)
T PRK05717 88 LVCNAAIA 95 (255)
T ss_pred EEECCCcc
Confidence 99999864
No 324
>PRK06949 short chain dehydrogenase; Provisional
Probab=97.45 E-value=0.0011 Score=60.55 Aligned_cols=84 Identities=23% Similarity=0.255 Sum_probs=59.3
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
..+.+++|+|+ |++|..+++.+...|++ |++++|+.++++.+.+ .+....+-.-|..+.+++++.+.++.. ..
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAK-VVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAG 85 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 34689999999 99999999999999996 9999998887654422 222222222334455677776666532 34
Q ss_pred CCceEEEcccc
Q psy1413 389 QPDKTIDCSGI 399 (408)
Q Consensus 389 ~~d~i~d~~g~ 399 (408)
++|++|++.|.
T Consensus 86 ~~d~li~~ag~ 96 (258)
T PRK06949 86 TIDILVNNSGV 96 (258)
T ss_pred CCCEEEECCCC
Confidence 78999999985
No 325
>PRK09242 tropinone reductase; Provisional
Probab=97.44 E-value=0.0012 Score=60.25 Aligned_cols=83 Identities=24% Similarity=0.175 Sum_probs=60.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-H---c--CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-E---M--GADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~---~--ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+. + . +....+...|..+.+++++.+.++.. .
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 86 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGAD-VLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHW 86 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4679999999 99999999999999997 888899877765442 2 2 33333334455556677766665532 3
Q ss_pred CCCceEEEcccc
Q psy1413 388 EQPDKTIDCSGI 399 (408)
Q Consensus 388 ~~~d~i~d~~g~ 399 (408)
.++|+++++.|.
T Consensus 87 g~id~li~~ag~ 98 (257)
T PRK09242 87 DGLHILVNNAGG 98 (257)
T ss_pred CCCCEEEECCCC
Confidence 479999999986
No 326
>PRK08264 short chain dehydrogenase; Validated
Probab=97.43 E-value=0.00094 Score=60.24 Aligned_cols=78 Identities=21% Similarity=0.200 Sum_probs=56.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 394 (408)
.+.+++|+|+ |++|..+++.+...|+++|++++|+.++.+. .+....+-..|..+.+++++.+... ..+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~---~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD---LGPRVVPLQLDVTDPASVAAAAEAA---SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh---cCCceEEEEecCCCHHHHHHHHHhc---CCCCEEE
Confidence 4578999999 9999999999999999559999998776553 3333322233444456666655543 3689999
Q ss_pred Ecccc
Q psy1413 395 DCSGI 399 (408)
Q Consensus 395 d~~g~ 399 (408)
++.|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 99987
No 327
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=97.43 E-value=0.0012 Score=60.27 Aligned_cols=84 Identities=23% Similarity=0.248 Sum_probs=60.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++.|.....-.-|..+.+++++.+.++.. ..+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 87 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAE-VILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGP 87 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4688999999 99999999999999997 88889987765443 22343333333344556777777766532 357
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|++.|..
T Consensus 88 ~d~li~~ag~~ 98 (255)
T PRK07523 88 IDILVNNAGMQ 98 (255)
T ss_pred CCEEEECCCCC
Confidence 89999999854
No 328
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.43 E-value=0.0011 Score=59.77 Aligned_cols=82 Identities=29% Similarity=0.323 Sum_probs=59.7
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
+.++||+|+ |++|..+++.+...|.+ |++++|+..+.+.+ ++.+....+...|..+.+++.+.+.++.. ..++
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGAK-VVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL 83 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999 99999999999999998 89999987765432 33455444444455555666666665432 2468
Q ss_pred ceEEEcccc
Q psy1413 391 DKTIDCSGI 399 (408)
Q Consensus 391 d~i~d~~g~ 399 (408)
|.+++++|.
T Consensus 84 d~vi~~ag~ 92 (246)
T PRK05653 84 DILVNNAGI 92 (246)
T ss_pred CEEEECCCc
Confidence 999999975
No 329
>PRK07791 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.0011 Score=61.79 Aligned_cols=85 Identities=26% Similarity=0.256 Sum_probs=60.8
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh---------hhHHH----HHHcCCCeEEecCCCCChHHHHHH
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE---------HKLKT----AKEMGADATVLIDRNHSLEEISTH 380 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~---------~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~ 380 (408)
-.+.++||+|+ +++|..+++.+...|++ |++++++. ++++. +++.|....+...|..+.+++++.
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~-vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 82 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGAR-VVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANL 82 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCE-EEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHH
Confidence 35689999999 99999999999999998 77776654 33332 233354444444556667788877
Q ss_pred HHHHhc-CCCCceEEEcccch
Q psy1413 381 IIELLQ-GEQPDKTIDCSGIE 400 (408)
Q Consensus 381 ~~~~~~-~~~~d~i~d~~g~~ 400 (408)
+.++.. ..++|++|++.|..
T Consensus 83 ~~~~~~~~g~id~lv~nAG~~ 103 (286)
T PRK07791 83 VDAAVETFGGLDVLVNNAGIL 103 (286)
T ss_pred HHHHHHhcCCCCEEEECCCCC
Confidence 777654 25799999999864
No 330
>PRK06101 short chain dehydrogenase; Provisional
Probab=97.43 E-value=0.00099 Score=60.32 Aligned_cols=79 Identities=23% Similarity=0.135 Sum_probs=58.0
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~ 396 (408)
++++|+|+ |++|..+++.+...|++ |++++|+.++++.+.+.+....+-..|..+.+++++.+.++. ...|.++.+
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~--~~~d~~i~~ 78 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQ-VIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLP--FIPELWIFN 78 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCE-EEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcc--cCCCEEEEc
Confidence 57999999 99999999999999997 888999988877765544222222344455677777777653 246888877
Q ss_pred ccc
Q psy1413 397 SGI 399 (408)
Q Consensus 397 ~g~ 399 (408)
.|.
T Consensus 79 ag~ 81 (240)
T PRK06101 79 AGD 81 (240)
T ss_pred Ccc
Confidence 764
No 331
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=97.43 E-value=0.0011 Score=60.09 Aligned_cols=84 Identities=15% Similarity=0.105 Sum_probs=57.6
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH----HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL----KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~----~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
++++||+|+ |++|..+++.+...|++.++...++..+. +.+++.+........|..+.+++.+.+.++.. .+++
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 82 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI 82 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 578999999 99999999999999998433344433332 22334565554444555566777777666543 2579
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|++|++.|..
T Consensus 83 d~li~~ag~~ 92 (246)
T PRK12938 83 DVLVNNAGIT 92 (246)
T ss_pred CEEEECCCCC
Confidence 9999999864
No 332
>PRK08643 acetoin reductase; Validated
Probab=97.43 E-value=0.0012 Score=60.17 Aligned_cols=83 Identities=18% Similarity=0.236 Sum_probs=59.8
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ .+.+....+-..|..+.+++.+.+.++.. ..++
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 80 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFK-VAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDL 80 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999 99999999999999996 88888887665433 22344333334455566777777766543 2479
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|.+|++.|..
T Consensus 81 d~vi~~ag~~ 90 (256)
T PRK08643 81 NVVVNNAGVA 90 (256)
T ss_pred CEEEECCCCC
Confidence 9999999853
No 333
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.42 E-value=0.0012 Score=62.25 Aligned_cols=84 Identities=21% Similarity=0.285 Sum_probs=60.8
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQGEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++.+++. .+.+ .+++.|....+...|..+.+++++.+..+....+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~-Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~~g~ 89 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGAT-VVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVGLGG 89 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHhCC
Confidence 4578999999 99999999999999997 77777643 2322 2334455555555666677777777766544457
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|+++|..
T Consensus 90 iD~li~nAG~~ 100 (306)
T PRK07792 90 LDIVVNNAGIT 100 (306)
T ss_pred CCEEEECCCCC
Confidence 99999999864
No 334
>PRK07035 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0014 Score=59.77 Aligned_cols=83 Identities=19% Similarity=0.213 Sum_probs=58.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++.+....+-..+..+.+++++.+.+... -..
T Consensus 7 ~~k~vlItGas~gIG~~l~~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (252)
T PRK07035 7 TGKIALVTGASRGIGEAIAKLLAQQGAH-VIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGR 85 (252)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999 99999999999999996 89999887665443 22343332223344556677666666543 246
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|+++++.|.
T Consensus 86 id~li~~ag~ 95 (252)
T PRK07035 86 LDILVNNAAA 95 (252)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 335
>PRK08226 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0013 Score=60.28 Aligned_cols=83 Identities=23% Similarity=0.263 Sum_probs=59.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH---HcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK---EMGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~---~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
.+.+++|+|+ |++|..+++.+...|++ |++++|+....+..+ +.+....+-..|..+.+++.+.+.++.. ..++
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 83 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGAN-LILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRI 83 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999 99999999999999998 888888865433332 2343333334455566777776666543 2478
Q ss_pred ceEEEcccc
Q psy1413 391 DKTIDCSGI 399 (408)
Q Consensus 391 d~i~d~~g~ 399 (408)
|.+|++.|.
T Consensus 84 d~vi~~ag~ 92 (263)
T PRK08226 84 DILVNNAGV 92 (263)
T ss_pred CEEEECCCc
Confidence 999999985
No 336
>PRK06181 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0014 Score=60.16 Aligned_cols=82 Identities=24% Similarity=0.261 Sum_probs=59.5
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
.++||+|+ |++|..+++.+...|++ |++++|+..+.+.+ +..+....+...|..+.+++.+.+.++.. ..++|
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 80 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQ-LVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID 80 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 57999999 99999999999999986 89999987664432 33454444444555566777777766543 24689
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
.+|+++|..
T Consensus 81 ~vi~~ag~~ 89 (263)
T PRK06181 81 ILVNNAGIT 89 (263)
T ss_pred EEEECCCcc
Confidence 999999853
No 337
>PRK07774 short chain dehydrogenase; Provisional
Probab=97.41 E-value=0.0014 Score=59.50 Aligned_cols=83 Identities=20% Similarity=0.152 Sum_probs=56.9
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++.+.....-..|..+.+++.+.+.++.. ..+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGAS-VVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGG 83 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4578999999 99999999999999987 88888887654333 22232222223344455666665555432 236
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|++|+++|.
T Consensus 84 id~vi~~ag~ 93 (250)
T PRK07774 84 IDYLVNNAAI 93 (250)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 338
>PRK06125 short chain dehydrogenase; Provisional
Probab=97.40 E-value=0.0014 Score=60.01 Aligned_cols=81 Identities=25% Similarity=0.206 Sum_probs=57.9
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-----cCCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-----MGADATVLIDRNHSLEEISTHIIELLQGEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-----~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (408)
.+.++||+|+ +++|..+++.+...|++ |++++|+.++.+.+.+ .+....+..-|..+.+++.+.+... ..
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~---g~ 81 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCH-LHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA---GD 81 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh---CC
Confidence 3689999999 99999999999999995 9999998776654321 2333333333444556666665543 47
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|++.|..
T Consensus 82 id~lv~~ag~~ 92 (259)
T PRK06125 82 IDILVNNAGAI 92 (259)
T ss_pred CCEEEECCCCC
Confidence 99999999863
No 339
>PRK06196 oxidoreductase; Provisional
Probab=97.40 E-value=0.001 Score=63.00 Aligned_cols=82 Identities=22% Similarity=0.316 Sum_probs=59.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ .++..-..+ .-|..+.+++++.+.++.. ..++|+
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~-Vv~~~R~~~~~~~~~~~l~~v~~~-~~Dl~d~~~v~~~~~~~~~~~~~iD~ 102 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAH-VIVPARRPDVAREALAGIDGVEVV-MLDLADLESVRAFAERFLDSGRRIDI 102 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhhhCeEE-EccCCCHHHHHHHHHHHHhcCCCCCE
Confidence 3578999999 99999999999999997 88889988776544 333211222 2344556777777766543 357999
Q ss_pred EEEcccc
Q psy1413 393 TIDCSGI 399 (408)
Q Consensus 393 i~d~~g~ 399 (408)
+|+++|.
T Consensus 103 li~nAg~ 109 (315)
T PRK06196 103 LINNAGV 109 (315)
T ss_pred EEECCCC
Confidence 9999985
No 340
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=97.40 E-value=0.0013 Score=59.82 Aligned_cols=81 Identities=20% Similarity=0.228 Sum_probs=60.5
Q ss_pred EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEEE
Q psy1413 319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTID 395 (408)
Q Consensus 319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~d 395 (408)
+++|+|+ |++|..+++.+...|++ |++++|+.++++.+.+ ++....+..-|..+.+++++.+.++.. ..++|.+++
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~ 80 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHK-VIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVN 80 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5899999 99999999999999997 8889999887766533 454444444455566777777666543 247999999
Q ss_pred cccch
Q psy1413 396 CSGIE 400 (408)
Q Consensus 396 ~~g~~ 400 (408)
++|..
T Consensus 81 ~ag~~ 85 (248)
T PRK10538 81 NAGLA 85 (248)
T ss_pred CCCcc
Confidence 99853
No 341
>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional
Probab=97.40 E-value=0.00069 Score=65.98 Aligned_cols=83 Identities=24% Similarity=0.298 Sum_probs=61.5
Q ss_pred hhhhhhcc-Cc-CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHH
Q psy1413 305 GVHACRRA-GV-TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHII 382 (408)
Q Consensus 305 ~~~~~~~~-~~-~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~ 382 (408)
.+.++.+. .+ -.+++++|+|.|.+|+.+++.++.+|++ |+++++++.+...+...|+. +.+ +.+.+
T Consensus 198 ~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~-ViV~d~dp~ra~~A~~~G~~-v~~---------l~eal- 265 (425)
T PRK05476 198 LLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGAR-VIVTEVDPICALQAAMDGFR-VMT---------MEEAA- 265 (425)
T ss_pred hHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCE-EEEEcCCchhhHHHHhcCCE-ecC---------HHHHH-
Confidence 44444333 33 3789999999999999999999999996 99999988887766666764 221 22222
Q ss_pred HHhcCCCCceEEEcccchhhhh
Q psy1413 383 ELLQGEQPDKTIDCSGIESTIK 404 (408)
Q Consensus 383 ~~~~~~~~d~i~d~~g~~~~~~ 404 (408)
+++|++|+++|....++
T Consensus 266 -----~~aDVVI~aTG~~~vI~ 282 (425)
T PRK05476 266 -----ELGDIFVTATGNKDVIT 282 (425)
T ss_pred -----hCCCEEEECCCCHHHHH
Confidence 26899999999887765
No 342
>PRK07024 short chain dehydrogenase; Provisional
Probab=97.39 E-value=0.0015 Score=59.85 Aligned_cols=83 Identities=20% Similarity=0.263 Sum_probs=59.2
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCC--CeEEecCCCCChHHHHHHHHHHhcC-CCCc
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGA--DATVLIDRNHSLEEISTHIIELLQG-EQPD 391 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga--~~~i~~~~~~~~~~~~~~~~~~~~~-~~~d 391 (408)
..++||+|+ |++|..+++.+...|++ |++++|+.++++.+.+ +.. ...+-.-|..+.+++.+.+.++... ..+|
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id 80 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGAT-LGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPD 80 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCC
Confidence 357999999 99999999999999996 8889998887765433 321 2222234445567777776665432 3589
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
++|+++|..
T Consensus 81 ~lv~~ag~~ 89 (257)
T PRK07024 81 VVIANAGIS 89 (257)
T ss_pred EEEECCCcC
Confidence 999999853
No 343
>PRK08589 short chain dehydrogenase; Validated
Probab=97.38 E-value=0.0014 Score=60.53 Aligned_cols=83 Identities=20% Similarity=0.245 Sum_probs=58.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH-H---HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT-A---KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~-~---~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.++++||+|+ +++|..+++.+...|++ |++++|+ ++.+. + ++.+........|..+.+++.+.+.++.. ..+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~-vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAY-VLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGR 82 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCC
Confidence 4678999999 99999999999999997 8888888 44332 2 23343333333444556677776666643 246
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|++.|..
T Consensus 83 id~li~~Ag~~ 93 (272)
T PRK08589 83 VDVLFNNAGVD 93 (272)
T ss_pred cCEEEECCCCC
Confidence 89999999864
No 344
>PRK06057 short chain dehydrogenase; Provisional
Probab=97.38 E-value=0.0012 Score=60.27 Aligned_cols=82 Identities=28% Similarity=0.281 Sum_probs=59.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
++++++|+|+ |++|..+++.+...|++ |++++|+..+.+.. ++++.. .+ ..|..+.+++++.+.++.. ..++|.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~-~~-~~D~~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGAT-VVVGDIDPEAGKAAADEVGGL-FV-PTDVTDEDAVNALFDTAAETYGSVDI 82 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHcCCc-EE-EeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 4689999999 99999999999999997 88888887776544 444432 22 2233445666666666533 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|+++|..
T Consensus 83 vi~~ag~~ 90 (255)
T PRK06057 83 AFNNAGIS 90 (255)
T ss_pred EEECCCcC
Confidence 99999853
No 345
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=97.37 E-value=0.0015 Score=62.09 Aligned_cols=83 Identities=20% Similarity=0.265 Sum_probs=59.6
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC---CCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG---ADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++. ....+...|..+.+++++.+.++.. ..+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~ 83 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWH-VIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKP 83 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence 4678999999 99999999999999986 88889988776544 3332 2222223445556777777766532 346
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|++|+++|.
T Consensus 84 iD~li~nAg~ 93 (322)
T PRK07453 84 LDALVCNAAV 93 (322)
T ss_pred ccEEEECCcc
Confidence 9999999985
No 346
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=97.37 E-value=0.0016 Score=59.59 Aligned_cols=83 Identities=25% Similarity=0.239 Sum_probs=60.4
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT 393 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i 393 (408)
+.++||+|+ |++|..+++.+...|++ |++++++.++.+.+ ++++....+-.-|..+.+++++.+.++.. ..++|++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l 84 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGAR-VVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL 84 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 578999999 99999999999999997 88888988776554 33443333333444556777777666533 2479999
Q ss_pred EEcccch
Q psy1413 394 IDCSGIE 400 (408)
Q Consensus 394 ~d~~g~~ 400 (408)
+++.|..
T Consensus 85 i~~ag~~ 91 (257)
T PRK07067 85 FNNAALF 91 (257)
T ss_pred EECCCcC
Confidence 9998853
No 347
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=97.37 E-value=0.0014 Score=60.62 Aligned_cols=83 Identities=24% Similarity=0.241 Sum_probs=59.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.+++|+|+ |++|+.+++.+...|++ |++++|+.++.+.+ ++.+.....-..|..+.+++.+.+.++.. ..+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 87 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAK-VAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGP 87 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999 99999999999999997 88889887665433 22344333333444455667666666543 247
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|++|+++|.
T Consensus 88 id~li~~ag~ 97 (278)
T PRK08277 88 CDILINGAGG 97 (278)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 348
>PRK06940 short chain dehydrogenase; Provisional
Probab=97.37 E-value=0.0014 Score=60.73 Aligned_cols=82 Identities=22% Similarity=0.257 Sum_probs=57.5
Q ss_pred CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413 317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK 392 (408)
Q Consensus 317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~ 392 (408)
++++||+|+|++|..+++.+. .|++ |++++|+.++++.+ ++.|....+...|..+.+++.+.+.++....++|.
T Consensus 2 ~k~~lItGa~gIG~~la~~l~-~G~~-Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~ 79 (275)
T PRK06940 2 KEVVVVIGAGGIGQAIARRVG-AGKK-VLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTG 79 (275)
T ss_pred CCEEEEECCChHHHHHHHHHh-CCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCE
Confidence 357888888999999999985 7876 88899987765433 22344333333455566777777766533357999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|+++|..
T Consensus 80 li~nAG~~ 87 (275)
T PRK06940 80 LVHTAGVS 87 (275)
T ss_pred EEECCCcC
Confidence 99999864
No 349
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.37 E-value=0.0017 Score=59.35 Aligned_cols=84 Identities=21% Similarity=0.269 Sum_probs=60.6
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|++++.+.+ ++.+....+..-|..+.+.+.+.+.++.. ..+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 84 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAA-VAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGS 84 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCe-EEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999 99999999999999997 88888887665433 33455444444455556666666665432 246
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|+++|..
T Consensus 85 ~d~vi~~ag~~ 95 (262)
T PRK13394 85 VDILVSNAGIQ 95 (262)
T ss_pred CCEEEECCccC
Confidence 89999999863
No 350
>PRK06484 short chain dehydrogenase; Validated
Probab=97.36 E-value=0.0012 Score=67.18 Aligned_cols=85 Identities=18% Similarity=0.162 Sum_probs=64.3
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
..++++||+|+ +++|+.+++.+...|++ |++++|+.++++.+. +++.......-|..+.+++++.+.++.. .+.+|
T Consensus 267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id 345 (520)
T PRK06484 267 ESPRVVAITGGARGIGRAVADRFAAAGDR-LLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLD 345 (520)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 46789999999 99999999999999996 888999888876654 3554433333445566777777776543 24799
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
++|+++|..
T Consensus 346 ~li~nAg~~ 354 (520)
T PRK06484 346 VLVNNAGIA 354 (520)
T ss_pred EEEECCCCc
Confidence 999999864
No 351
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.36 E-value=0.0019 Score=58.36 Aligned_cols=83 Identities=27% Similarity=0.332 Sum_probs=60.2
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
+.+++|+|+ |++|..+++.+...|++ |++++|++++.+.+ +..+....+...|..+.+++++.++++.. ..++
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVN-VGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSI 85 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCc
Confidence 478999999 99999999999999995 99999987765433 33343333334455566777777766543 2479
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|.+|++.|..
T Consensus 86 d~vi~~ag~~ 95 (239)
T PRK07666 86 DILINNAGIS 95 (239)
T ss_pred cEEEEcCccc
Confidence 9999999864
No 352
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=97.35 E-value=0.0019 Score=58.93 Aligned_cols=84 Identities=19% Similarity=0.238 Sum_probs=60.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.+++|+|+ |++|..+++.+...|++ |++++|+.++++.+ ++.+.....-.-|..+.+++.+.+.++.. ..+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 88 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAH-VLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR 88 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 4689999999 99999999999999996 89999987665433 33453333333444556777777666543 247
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|++.|..
T Consensus 89 id~vi~~ag~~ 99 (256)
T PRK06124 89 LDILVNNVGAR 99 (256)
T ss_pred CCEEEECCCCC
Confidence 89999999853
No 353
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=97.35 E-value=0.0018 Score=59.05 Aligned_cols=83 Identities=25% Similarity=0.337 Sum_probs=59.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +..+....+-.-|..+.+++++.+.++.. ..+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~-vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 86 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAE-IIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGP 86 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCE-EEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCC
Confidence 4678999999 99999999999999996 88888887765443 22343333333444556777776666532 347
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|.++++.|.
T Consensus 87 id~vi~~ag~ 96 (254)
T PRK08085 87 IDVLINNAGI 96 (254)
T ss_pred CCEEEECCCc
Confidence 9999999985
No 354
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=97.34 E-value=0.0019 Score=58.44 Aligned_cols=84 Identities=26% Similarity=0.268 Sum_probs=60.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
.+.++||+|+ |++|+.+++.+...|++ |++.+++.++++.+ ...+....+...|..+.+++.+.+.++.. ..++|.
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 83 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAI-VGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDI 83 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3578999999 99999999999999986 77777877776654 33454333334444556677766665533 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|+++|..
T Consensus 84 vi~~ag~~ 91 (245)
T PRK12936 84 LVNNAGIT 91 (245)
T ss_pred EEECCCCC
Confidence 99999853
No 355
>KOG1205|consensus
Probab=97.33 E-value=0.0017 Score=59.54 Aligned_cols=85 Identities=24% Similarity=0.262 Sum_probs=64.0
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCC--eEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGAD--ATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~--~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.+++++|+|+ .|+|..++.-+..+|++ ++++.++.++++. +++.++. ..+-.-|..+.+++++.+..+.. -
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~-l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f 89 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAK-LVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF 89 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCc-eEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence 4678999999 99999999999999998 7777777766554 4555533 34445666677888888766542 4
Q ss_pred CCCceEEEcccchh
Q psy1413 388 EQPDKTIDCSGIES 401 (408)
Q Consensus 388 ~~~d~i~d~~g~~~ 401 (408)
+++|+.+|..|...
T Consensus 90 g~vDvLVNNAG~~~ 103 (282)
T KOG1205|consen 90 GRVDVLVNNAGISL 103 (282)
T ss_pred CCCCEEEecCcccc
Confidence 68999999998653
No 356
>PRK06482 short chain dehydrogenase; Provisional
Probab=97.33 E-value=0.0018 Score=59.89 Aligned_cols=82 Identities=20% Similarity=0.093 Sum_probs=59.9
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI 394 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~ 394 (408)
.++||+|+ |++|..+++.+...|.+ |++++|+.++.+.+++ .+....+-..|..+.+++.+.+.++.. ..++|++|
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi 81 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDR-VAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVV 81 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 57999999 99999999999999997 8888898887766544 333333333444556777777766432 35789999
Q ss_pred Ecccch
Q psy1413 395 DCSGIE 400 (408)
Q Consensus 395 d~~g~~ 400 (408)
+++|..
T Consensus 82 ~~ag~~ 87 (276)
T PRK06482 82 SNAGYG 87 (276)
T ss_pred ECCCCC
Confidence 999854
No 357
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=97.32 E-value=0.0019 Score=59.34 Aligned_cols=84 Identities=23% Similarity=0.297 Sum_probs=61.0
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.+++|+|+ +++|..+++.+...|++ |++++++.++.+.+ +..|....+-.-|..+.+++++.+.++.. -.+
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGAT-IVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 4578999999 99999999999999998 88888887765433 33455444334455566777776666543 246
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|++.|..
T Consensus 88 id~li~~ag~~ 98 (265)
T PRK07097 88 IDILVNNAGII 98 (265)
T ss_pred CCEEEECCCCC
Confidence 99999999863
No 358
>PRK07832 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0014 Score=60.45 Aligned_cols=81 Identities=21% Similarity=0.303 Sum_probs=56.5
Q ss_pred EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEE-ecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATV-LIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i-~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
+++|+|+ |++|..+++.+...|++ |++++|++++++.+ +..+...+. ...|..+.+++.+.+.++.. ..++|
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~-vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAE-LFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMD 80 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence 6899999 99999999999999997 88888887765433 333443221 22334455666666665532 34799
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
++|+++|..
T Consensus 81 ~lv~~ag~~ 89 (272)
T PRK07832 81 VVMNIAGIS 89 (272)
T ss_pred EEEECCCCC
Confidence 999999853
No 359
>PLN02780 ketoreductase/ oxidoreductase
Probab=97.32 E-value=0.0016 Score=61.85 Aligned_cols=82 Identities=23% Similarity=0.272 Sum_probs=56.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-H----cC-CCe---EEecCCCCChHHHHHHHHHHh
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-E----MG-ADA---TVLIDRNHSLEEISTHIIELL 385 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~----~g-a~~---~i~~~~~~~~~~~~~~~~~~~ 385 (408)
.+++++|+|+ +++|..+++.+...|++ |++++|+.++++.+. + ++ ... ..|..+ +..+..+.+.+..
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~-Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~--~~~~~~~~l~~~~ 128 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLN-LVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSG--DIDEGVKRIKETI 128 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCC-EEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCC--CcHHHHHHHHHHh
Confidence 4789999999 99999999999999997 999999988876542 2 22 111 223321 2234444455554
Q ss_pred cCCCCceEEEcccch
Q psy1413 386 QGEQPDKTIDCSGIE 400 (408)
Q Consensus 386 ~~~~~d~i~d~~g~~ 400 (408)
++..+|++++++|..
T Consensus 129 ~~~didilVnnAG~~ 143 (320)
T PLN02780 129 EGLDVGVLINNVGVS 143 (320)
T ss_pred cCCCccEEEEecCcC
Confidence 444577999999864
No 360
>PRK07454 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0024 Score=57.68 Aligned_cols=84 Identities=27% Similarity=0.309 Sum_probs=59.9
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
....+++|+|+ |++|+.+++.+...|.+ |++++|+.++.+.+ ++.+....+-..|..+.+++.+.+.++.. ..
T Consensus 4 ~~~k~vlItG~sg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (241)
T PRK07454 4 NSMPRALITGASSGIGKATALAFAKAGWD-LALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFG 82 (241)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 34578999999 99999999999999996 99899987765543 22333333333444556777666666533 24
Q ss_pred CCceEEEcccc
Q psy1413 389 QPDKTIDCSGI 399 (408)
Q Consensus 389 ~~d~i~d~~g~ 399 (408)
++|.+|++.|.
T Consensus 83 ~id~lv~~ag~ 93 (241)
T PRK07454 83 CPDVLINNAGM 93 (241)
T ss_pred CCCEEEECCCc
Confidence 69999999985
No 361
>PRK08303 short chain dehydrogenase; Provisional
Probab=97.32 E-value=0.0017 Score=61.13 Aligned_cols=83 Identities=17% Similarity=0.169 Sum_probs=59.6
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh----------hhHH----HHHHcCCCeEEecCCCCChHHHHHH
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE----------HKLK----TAKEMGADATVLIDRNHSLEEISTH 380 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~----------~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~ 380 (408)
.+.++||+|+ +++|+.+++.+...|++ |++++|+. ++++ .+++.|........|..+.+++++.
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~-Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~ 85 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGAT-VYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRAL 85 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHH
Confidence 3678999999 99999999999999997 88888863 2332 2333454444444556667788877
Q ss_pred HHHHhcC-CCCceEEEcc-cc
Q psy1413 381 IIELLQG-EQPDKTIDCS-GI 399 (408)
Q Consensus 381 ~~~~~~~-~~~d~i~d~~-g~ 399 (408)
+.++... .++|++|+++ |.
T Consensus 86 ~~~~~~~~g~iDilVnnA~g~ 106 (305)
T PRK08303 86 VERIDREQGRLDILVNDIWGG 106 (305)
T ss_pred HHHHHHHcCCccEEEECCccc
Confidence 7776542 4799999998 64
No 362
>PRK05875 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.002 Score=59.51 Aligned_cols=82 Identities=20% Similarity=0.214 Sum_probs=57.7
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc-----CCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM-----GADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
++++||+|+ |++|..+++.+...|++ |++++|+.++.+.. +++ +....+...|..+.+++.+.+.++.. ..
T Consensus 7 ~k~vlItGasg~IG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 7 DRTYLVTGGGSGIGKGVAAGLVAAGAA-VMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 578999999 99999999999999996 88898887665433 221 12222223344455677666666543 34
Q ss_pred CCceEEEcccc
Q psy1413 389 QPDKTIDCSGI 399 (408)
Q Consensus 389 ~~d~i~d~~g~ 399 (408)
++|++|++.|.
T Consensus 86 ~~d~li~~ag~ 96 (276)
T PRK05875 86 RLHGVVHCAGG 96 (276)
T ss_pred CCCEEEECCCc
Confidence 78999999985
No 363
>PRK06197 short chain dehydrogenase; Provisional
Probab=97.31 E-value=0.0019 Score=60.86 Aligned_cols=84 Identities=29% Similarity=0.240 Sum_probs=59.6
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc-----CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM-----GADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++ +....+..-|..+.+++++.+.++.. .
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~-vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 93 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAH-VVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY 93 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence 4578999999 99999999999999996 88888887765432 211 22222333455566777777776643 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
.++|++|+++|..
T Consensus 94 ~~iD~li~nAg~~ 106 (306)
T PRK06197 94 PRIDLLINNAGVM 106 (306)
T ss_pred CCCCEEEECCccc
Confidence 4699999999853
No 364
>PRK08017 oxidoreductase; Provisional
Probab=97.31 E-value=0.0016 Score=59.32 Aligned_cols=79 Identities=19% Similarity=0.225 Sum_probs=57.6
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc--CCCCceEE
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ--GEQPDKTI 394 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~~~d~i~ 394 (408)
+++||+|+ |++|+.+++.+...|++ |++++|+.++.+.+++.++..+. .|..+.+++.+.+..+.. +..+|.++
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~--~D~~~~~~~~~~~~~i~~~~~~~~~~ii 79 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYR-VLAACRKPDDVARMNSLGFTGIL--LDLDDPESVERAADEVIALTDNRLYGLF 79 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHhHHHHhCCCeEEE--eecCCHHHHHHHHHHHHHhcCCCCeEEE
Confidence 57999999 99999999999999996 88889999888877777754432 222334555444444321 34789999
Q ss_pred Ecccc
Q psy1413 395 DCSGI 399 (408)
Q Consensus 395 d~~g~ 399 (408)
++.|.
T Consensus 80 ~~ag~ 84 (256)
T PRK08017 80 NNAGF 84 (256)
T ss_pred ECCCC
Confidence 98874
No 365
>PRK12743 oxidoreductase; Provisional
Probab=97.31 E-value=0.0021 Score=58.74 Aligned_cols=83 Identities=20% Similarity=0.153 Sum_probs=57.2
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
++++||+|+ |++|+.+++.+...|++ |+++. ++.++.+ .++..|....+..-|..+.+++++.+.++.. ..+
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFD-IGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRLGR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 468999999 99999999999999998 66554 4444433 3344565444444455556777666666543 247
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|+++|..
T Consensus 81 id~li~~ag~~ 91 (256)
T PRK12743 81 IDVLVNNAGAM 91 (256)
T ss_pred CCEEEECCCCC
Confidence 99999999853
No 366
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.30 E-value=0.0021 Score=58.43 Aligned_cols=84 Identities=17% Similarity=0.150 Sum_probs=58.9
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
++.++||+|+ |++|+.+++.+...|++.+++..|+..+.+. +++.+....+-..|..+.+++.+.+.++.. ..+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999 9999999999999999844445677665433 233454444334555566777777766643 246
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|++|++.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999999885
No 367
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=97.29 E-value=0.0024 Score=58.19 Aligned_cols=83 Identities=29% Similarity=0.308 Sum_probs=59.8
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++.+....+-..|..+.+++.+.+.++.. ..+
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 81 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAK-VVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGG 81 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999 99999999999999997 88889987766543 22344433333455556777776666543 247
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|++|+++|.
T Consensus 82 ~d~vi~~a~~ 91 (258)
T PRK12429 82 VDILVNNAGI 91 (258)
T ss_pred CCEEEECCCC
Confidence 9999999984
No 368
>PRK06484 short chain dehydrogenase; Validated
Probab=97.29 E-value=0.0016 Score=66.25 Aligned_cols=83 Identities=23% Similarity=0.279 Sum_probs=63.4
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
.++++||+|+ +++|..+++.+...|++ |++++|+.++++.+ ++++........|..+.+++++.+.++.. ..++|+
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~ 82 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQ-VVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV 82 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence 5678999999 99999999999999997 88899988877654 55665443334455566777777777643 247999
Q ss_pred EEEcccc
Q psy1413 393 TIDCSGI 399 (408)
Q Consensus 393 i~d~~g~ 399 (408)
+|++.|.
T Consensus 83 li~nag~ 89 (520)
T PRK06484 83 LVNNAGV 89 (520)
T ss_pred EEECCCc
Confidence 9999886
No 369
>PRK09186 flagellin modification protein A; Provisional
Probab=97.29 E-value=0.002 Score=58.73 Aligned_cols=83 Identities=20% Similarity=0.287 Sum_probs=58.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHc----CCCe-EEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEM----GADA-TVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~----ga~~-~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++ +... .+...|..+.+++.+.+.++.. .
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~ 81 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGI-VIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKY 81 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHc
Confidence 4688999999 99999999999999997 88888887776543 222 3222 2223344556777777766533 2
Q ss_pred CCCceEEEcccc
Q psy1413 388 EQPDKTIDCSGI 399 (408)
Q Consensus 388 ~~~d~i~d~~g~ 399 (408)
.++|++|++.|.
T Consensus 82 ~~id~vi~~A~~ 93 (256)
T PRK09186 82 GKIDGAVNCAYP 93 (256)
T ss_pred CCccEEEECCcc
Confidence 469999999863
No 370
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.29 E-value=0.0018 Score=59.87 Aligned_cols=83 Identities=20% Similarity=0.170 Sum_probs=59.4
Q ss_pred CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhhH---HHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHKL---KTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~~---~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ + ++|..+++.+...|++ |++++|++... +.+ ++.|.... ...|..+.+++++.+.++.. .
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~-V~~~~r~~~~~~~~~~~~~~~g~~~~-~~~Dv~d~~~v~~~~~~~~~~~ 83 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAE-LAFTYQGEALGKRVKPLAESLGSDFV-LPCDVEDIASVDAVFEALEKKW 83 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCE-EEEecCchHHHHHHHHHHHhcCCceE-EeCCCCCHHHHHHHHHHHHHHh
Confidence 4678999998 5 9999999999999998 77787765322 222 33454332 33455667778877777654 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
..+|++++++|..
T Consensus 84 g~iD~lVnnAG~~ 96 (271)
T PRK06505 84 GKLDFVVHAIGFS 96 (271)
T ss_pred CCCCEEEECCccC
Confidence 5799999999864
No 371
>PRK08278 short chain dehydrogenase; Provisional
Probab=97.28 E-value=0.0019 Score=59.79 Aligned_cols=84 Identities=21% Similarity=0.295 Sum_probs=58.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-------HH----HHHHcCCCeEEecCCCCChHHHHHHHHH
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-------LK----TAKEMGADATVLIDRNHSLEEISTHIIE 383 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-------~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~ 383 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++ ++ .+++.+.....-..|..+.+++++.+.+
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~ 83 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGAN-IVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAK 83 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHH
Confidence 4578999999 99999999999999997 8888886532 11 2233454443333445556777776665
Q ss_pred Hhc-CCCCceEEEcccch
Q psy1413 384 LLQ-GEQPDKTIDCSGIE 400 (408)
Q Consensus 384 ~~~-~~~~d~i~d~~g~~ 400 (408)
+.. ...+|.+|+++|..
T Consensus 84 ~~~~~g~id~li~~ag~~ 101 (273)
T PRK08278 84 AVERFGGIDICVNNASAI 101 (273)
T ss_pred HHHHhCCCCEEEECCCCc
Confidence 432 24799999999853
No 372
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=97.28 E-value=0.0022 Score=58.15 Aligned_cols=84 Identities=21% Similarity=0.221 Sum_probs=59.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++.+. +++.+....+-..|..+.+++.+.+.++.. ...
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAE-VIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGR 83 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999 99999999999999986 8889998665433 233344333333444556777776665532 246
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|++.|..
T Consensus 84 ~d~vi~~ag~~ 94 (251)
T PRK12826 84 LDILVANAGIF 94 (251)
T ss_pred CCEEEECCCCC
Confidence 89999998754
No 373
>PRK06953 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0017 Score=57.95 Aligned_cols=79 Identities=27% Similarity=0.257 Sum_probs=58.3
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~ 396 (408)
++++|+|+ |++|..+++.+...|++ |++++++.++.+.++..+.. . ...|..+.+++++.+.++. +.++|++|.+
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~-v~~~~r~~~~~~~~~~~~~~-~-~~~D~~~~~~v~~~~~~~~-~~~~d~vi~~ 77 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWR-VIATARDAAALAALQALGAE-A-LALDVADPASVAGLAWKLD-GEALDAAVYV 77 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCE-EEEEECCHHHHHHHHhccce-E-EEecCCCHHHHHHHHHHhc-CCCCCEEEEC
Confidence 46899999 99999999999889997 88889988877777666543 2 2233344566666555543 3579999999
Q ss_pred ccch
Q psy1413 397 SGIE 400 (408)
Q Consensus 397 ~g~~ 400 (408)
.|..
T Consensus 78 ag~~ 81 (222)
T PRK06953 78 AGVY 81 (222)
T ss_pred CCcc
Confidence 8864
No 374
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=97.27 E-value=0.0025 Score=58.29 Aligned_cols=83 Identities=18% Similarity=0.173 Sum_probs=58.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++++ ++.+. +.+.+....+-..|..+.+++.+.+.++.. ..+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 91 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGAD-IIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK 91 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999 99999999999999998 7777776 33222 233454433334455566777777766643 246
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|++.|..
T Consensus 92 id~li~~ag~~ 102 (258)
T PRK06935 92 IDILVNNAGTI 102 (258)
T ss_pred CCEEEECCCCC
Confidence 89999999853
No 375
>PRK07856 short chain dehydrogenase; Provisional
Probab=97.27 E-value=0.0019 Score=58.90 Aligned_cols=80 Identities=20% Similarity=0.212 Sum_probs=56.6
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT 393 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i 393 (408)
.++++||+|+ |++|..+++.+...|++ |++++|+.++ +..+....+-.-|..+.+++++.+..+.. ..++|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~-v~~~~r~~~~----~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGAT-VVVCGRRAPE----TVDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCChhh----hhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4688999999 99999999999999997 8888887654 12232222223344456677776666533 2478999
Q ss_pred EEcccch
Q psy1413 394 IDCSGIE 400 (408)
Q Consensus 394 ~d~~g~~ 400 (408)
|++.|..
T Consensus 80 i~~ag~~ 86 (252)
T PRK07856 80 VNNAGGS 86 (252)
T ss_pred EECCCCC
Confidence 9999853
No 376
>PLN02253 xanthoxin dehydrogenase
Probab=97.27 E-value=0.0022 Score=59.48 Aligned_cols=84 Identities=19% Similarity=0.244 Sum_probs=58.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC--CCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG--ADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
.+.++||+|+ |++|..+++.+...|++ |++++++.++.+.+ ++++ ....+..-|..+.+++++.+.++.. ..++
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~i 95 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAK-VCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTL 95 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 3578999999 99999999999999997 88888876655433 3332 2222223344556677666665543 2469
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|++|+++|..
T Consensus 96 d~li~~Ag~~ 105 (280)
T PLN02253 96 DIMVNNAGLT 105 (280)
T ss_pred CEEEECCCcC
Confidence 9999999853
No 377
>PRK07806 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0025 Score=57.81 Aligned_cols=84 Identities=18% Similarity=0.119 Sum_probs=57.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
.+.++||+|+ |++|..+++.+...|.+ |++++|+.. +.+. ++..+.......-|..+.+++.+.+.++.. ..
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~-V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAH-VVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFG 83 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 3578999999 99999999999999987 877877643 3322 233344333333445556777776666543 24
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
++|++|++.|..
T Consensus 84 ~~d~vi~~ag~~ 95 (248)
T PRK07806 84 GLDALVLNASGG 95 (248)
T ss_pred CCcEEEECCCCC
Confidence 689999988753
No 378
>PRK12828 short chain dehydrogenase; Provisional
Probab=97.26 E-value=0.0019 Score=57.99 Aligned_cols=82 Identities=20% Similarity=0.090 Sum_probs=56.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
+++++||+|+ |++|..+++.+...|++ |++++|+..+... +++.+...+ ..|..+.+++++.+.++.. ..+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~--~~D~~~~~~~~~~~~~~~~~~~~ 82 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGAR-VALIGRGAAPLSQTLPGVPADALRIG--GIDLVDPQAARRAVDEVNRQFGR 82 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCe-EEEEeCChHhHHHHHHHHhhcCceEE--EeecCCHHHHHHHHHHHHHHhCC
Confidence 3679999999 99999999999999998 8999897665432 222333222 2333445666666665533 247
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|++.|..
T Consensus 83 ~d~vi~~ag~~ 93 (239)
T PRK12828 83 LDALVNIAGAF 93 (239)
T ss_pred cCEEEECCccc
Confidence 99999998853
No 379
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=97.26 E-value=0.0027 Score=57.94 Aligned_cols=83 Identities=28% Similarity=0.245 Sum_probs=59.2
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ +++|..+++.+...|++ +++++++.++.+.+ +..+.+..+-..|..+.+++++.+..+.. ..+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~-vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 88 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGAS-VVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGK 88 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3689999999 99999999999999997 77788877665443 33344333333445556667766665433 247
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|.++++.|.
T Consensus 89 ~d~li~~ag~ 98 (255)
T PRK06113 89 VDILVNNAGG 98 (255)
T ss_pred CCEEEECCCC
Confidence 8999999985
No 380
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=97.25 E-value=0.0025 Score=58.16 Aligned_cols=83 Identities=17% Similarity=0.249 Sum_probs=57.5
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh--HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK--LKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~--~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
+.++||+|+ |++|..+++.+...|++ |+.++++..+ .+.+++.+.....-.-|..+.+++.+.+.++.. ..++|+
T Consensus 10 ~k~~lItG~~~gIG~a~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D~ 88 (253)
T PRK08993 10 GKVAVVTGCDTGLGQGMALGLAEAGCD-IVGINIVEPTETIEQVTALGRRFLSLTADLRKIDGIPALLERAVAEFGHIDI 88 (253)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCE-EEEecCcchHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCCE
Confidence 578999999 99999999999999998 7777654322 233444453333223444556777777766543 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|+++|..
T Consensus 89 li~~Ag~~ 96 (253)
T PRK08993 89 LVNNAGLI 96 (253)
T ss_pred EEECCCCC
Confidence 99999863
No 381
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=97.25 E-value=0.0023 Score=58.52 Aligned_cols=83 Identities=17% Similarity=0.117 Sum_probs=57.6
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-H----cC-CCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-E----MG-ADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~----~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
++++||+|+ |++|..+++.+...|++ |++++|+..+.+.+. + .+ ....+-..|..+.+++.+.+.++.. ..
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~ 80 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYR-VAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFG 80 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 468999999 99999999999999997 888888876654332 1 23 1222223344556667666666533 24
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
++|.+|++.|..
T Consensus 81 ~id~vv~~ag~~ 92 (259)
T PRK12384 81 RVDLLVYNAGIA 92 (259)
T ss_pred CCCEEEECCCcC
Confidence 799999999854
No 382
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.24 E-value=0.0024 Score=58.23 Aligned_cols=82 Identities=18% Similarity=0.242 Sum_probs=56.3
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhcC-CCC
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQG-EQP 390 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~~ 390 (408)
.++||+|+ |++|..+++.+...|++ |++++|+.. +.+ .++..+....+..-|..+.+++.+.+.++... .++
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFD-LAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRI 81 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 57999999 99999999999999997 777877543 222 22333433333334445567777766666432 469
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|++|++.|..
T Consensus 82 d~vi~~ag~~ 91 (256)
T PRK12745 82 DCLVNNAGVG 91 (256)
T ss_pred CEEEECCccC
Confidence 9999999853
No 383
>PRK08263 short chain dehydrogenase; Provisional
Probab=97.24 E-value=0.0025 Score=58.89 Aligned_cols=83 Identities=19% Similarity=0.097 Sum_probs=59.3
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT 393 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i 393 (408)
+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+.+ ++....+...|..+.+++.+.+..+.. ..++|.+
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDR-VVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIV 81 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999 99999999999989987 8889998877765543 332222223444555666666665432 2478999
Q ss_pred EEcccch
Q psy1413 394 IDCSGIE 400 (408)
Q Consensus 394 ~d~~g~~ 400 (408)
|+++|..
T Consensus 82 i~~ag~~ 88 (275)
T PRK08263 82 VNNAGYG 88 (275)
T ss_pred EECCCCc
Confidence 9999864
No 384
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.24 E-value=0.0022 Score=58.51 Aligned_cols=84 Identities=15% Similarity=0.162 Sum_probs=59.5
Q ss_pred CCCEEEEEecc---hhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcC-CCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 316 LGSKVLITGAG---PIGLVTLLTARALGASRVVITDILEHKLKTAKEMG-ADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 316 ~~~~~lv~G~G---~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
.++++||+|++ ++|..+++.+...|++ |++++|+++..+.++++. .......-|..+.+++++.+.++.. ...+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGAT-VIYTYQNDRMKKSLQKLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEecCchHHHHHHHhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 46789999983 9999999999999998 888888754344444432 2222334455667777777777643 2479
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|++++++|..
T Consensus 85 D~lv~nAg~~ 94 (252)
T PRK06079 85 DGIVHAIAYA 94 (252)
T ss_pred CEEEEccccc
Confidence 9999999854
No 385
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=97.24 E-value=0.0027 Score=57.81 Aligned_cols=82 Identities=18% Similarity=0.183 Sum_probs=58.1
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
.+++|+|+ |++|..+++.+...|++ |++++++.++.+.+ ++.+....+-..|..+.+++.+.+.++.. ..++|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id 79 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLAKDGFA-VAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFD 79 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 37899999 99999999999999997 88888886655432 33454333333444556777776666543 24689
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
++|++.|..
T Consensus 80 ~vi~~ag~~ 88 (254)
T TIGR02415 80 VMVNNAGVA 88 (254)
T ss_pred EEEECCCcC
Confidence 999999863
No 386
>PRK12746 short chain dehydrogenase; Provisional
Probab=97.23 E-value=0.0023 Score=58.32 Aligned_cols=84 Identities=20% Similarity=0.252 Sum_probs=57.3
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH---cCCCeEEecCCCCChHHHHHHHHHHhc-----
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE---MGADATVLIDRNHSLEEISTHIIELLQ----- 386 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~---~ga~~~i~~~~~~~~~~~~~~~~~~~~----- 386 (408)
+.+++|+|+ |++|..+++.+...|++.++...|+.++.+.+ .. .+....+...|..+.+++.+.++++..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~ 85 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR 85 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence 478999999 99999999999999998434346776555433 22 233333334455566777777766542
Q ss_pred --CCCCceEEEcccch
Q psy1413 387 --GEQPDKTIDCSGIE 400 (408)
Q Consensus 387 --~~~~d~i~d~~g~~ 400 (408)
..++|++|++.|..
T Consensus 86 ~~~~~id~vi~~ag~~ 101 (254)
T PRK12746 86 VGTSEIDILVNNAGIG 101 (254)
T ss_pred cCCCCccEEEECCCCC
Confidence 24699999999853
No 387
>KOG1199|consensus
Probab=97.23 E-value=0.0016 Score=54.05 Aligned_cols=90 Identities=24% Similarity=0.320 Sum_probs=72.6
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
..+-.-||+|+ .++|...+.-+...|+. +++.+-- .+..+.++++|-..++...+.++.+|..+.+....+ -..+|
T Consensus 7 ~kglvalvtggasglg~ataerlakqgas-v~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld 85 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGAS-VALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLD 85 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCce-EEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhcccee
Confidence 34556788888 99999999999999998 7777754 444677899999999999998888999888877654 35789
Q ss_pred eEEEcccchhhhhh
Q psy1413 392 KTIDCSGIESTIKL 405 (408)
Q Consensus 392 ~i~d~~g~~~~~~~ 405 (408)
..+||.|....++.
T Consensus 86 ~~vncagia~a~kt 99 (260)
T KOG1199|consen 86 ALVNCAGIAYAFKT 99 (260)
T ss_pred eeeeccceeeeeee
Confidence 99999998766543
No 388
>PRK07326 short chain dehydrogenase; Provisional
Probab=97.22 E-value=0.0026 Score=57.24 Aligned_cols=84 Identities=23% Similarity=0.228 Sum_probs=58.4
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
.+.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++.. ...+-..|..+.+++.+.+.++.. ..++
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 83 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYK-VAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGL 83 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999 99999999999989997 88899988776544 33321 111112233455667666666533 2479
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|.+|++.|..
T Consensus 84 d~vi~~ag~~ 93 (237)
T PRK07326 84 DVLIANAGVG 93 (237)
T ss_pred CEEEECCCCC
Confidence 9999998753
No 389
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=97.22 E-value=0.0019 Score=60.44 Aligned_cols=70 Identities=27% Similarity=0.368 Sum_probs=54.4
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID 395 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d 395 (408)
.+++++|+|.|.+|+.+++.++.+|++ |.+++|+.++.+.++++|+..+ .. +++.+.+ +.+|+||+
T Consensus 151 ~g~kvlViG~G~iG~~~a~~L~~~Ga~-V~v~~r~~~~~~~~~~~G~~~~-~~------~~l~~~l------~~aDiVI~ 216 (296)
T PRK08306 151 HGSNVLVLGFGRTGMTLARTLKALGAN-VTVGARKSAHLARITEMGLSPF-HL------SELAEEV------GKIDIIFN 216 (296)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHcCCeee-cH------HHHHHHh------CCCCEEEE
Confidence 578999999999999999999999995 9999999888888888886533 11 2232222 36899999
Q ss_pred cccc
Q psy1413 396 CSGI 399 (408)
Q Consensus 396 ~~g~ 399 (408)
+++.
T Consensus 217 t~p~ 220 (296)
T PRK08306 217 TIPA 220 (296)
T ss_pred CCCh
Confidence 8764
No 390
>PRK06914 short chain dehydrogenase; Provisional
Probab=97.21 E-value=0.0027 Score=58.87 Aligned_cols=82 Identities=20% Similarity=0.173 Sum_probs=57.4
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcC--CCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMG--ADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~g--a~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+. +.+ ....+-..|..+.+++++ +.++.. ..
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~ 80 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYL-VIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIG 80 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcC
Confidence 467999999 99999999999999997 888888877654432 222 122222344455677766 665532 34
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
++|.++++.|..
T Consensus 81 ~id~vv~~ag~~ 92 (280)
T PRK06914 81 RIDLLVNNAGYA 92 (280)
T ss_pred CeeEEEECCccc
Confidence 789999998854
No 391
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=97.21 E-value=0.0028 Score=58.04 Aligned_cols=80 Identities=24% Similarity=0.211 Sum_probs=57.6
Q ss_pred EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
++||+|+ +++|..+++.+...|++ |++++|++++.+.+ ++.+.... -.-|..+.+++++.+.++.. ..++|+
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~-V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~Dv~d~~~~~~~~~~~~~~~g~id~ 79 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGAR-VVISSRNEENLEKALKELKEYGEVYA-VKADLSDKDDLKNLVKEAWELLGGIDA 79 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHhcCCceE-EEcCCCCHHHHHHHHHHHHHhcCCCCE
Confidence 5899999 99999999999999997 88899987765443 22332222 23344556777777776643 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|++.|..
T Consensus 80 li~naG~~ 87 (259)
T PRK08340 80 LVWNAGNV 87 (259)
T ss_pred EEECCCCC
Confidence 99999853
No 392
>PRK07074 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0034 Score=57.28 Aligned_cols=83 Identities=20% Similarity=0.200 Sum_probs=58.1
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC-CCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG-ADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
+.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +++. ....+...|..+.+++.+.+.++.. ..++|.
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 80 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDR-VLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDV 80 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 468999999 99999999999999987 88889988776554 3332 1122223344455666666665532 246999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|++.|..
T Consensus 81 vi~~ag~~ 88 (257)
T PRK07074 81 LVANAGAA 88 (257)
T ss_pred EEECCCCC
Confidence 99999854
No 393
>PRK07060 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0023 Score=57.90 Aligned_cols=79 Identities=24% Similarity=0.299 Sum_probs=55.9
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i 393 (408)
.+.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+.+ .+.. ++. .|..+.+++.+.+.. ..++|++
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~-~~~-~D~~~~~~v~~~~~~---~~~~d~v 81 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGAR-VVAAARNAAALDRLAGETGCE-PLR-LDVGDDAAIRAALAA---AGAFDGL 81 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHhCCe-EEE-ecCCCHHHHHHHHHH---hCCCCEE
Confidence 4578999999 99999999999999986 8889998877765533 4433 222 222334445554443 2479999
Q ss_pred EEcccch
Q psy1413 394 IDCSGIE 400 (408)
Q Consensus 394 ~d~~g~~ 400 (408)
|++.|..
T Consensus 82 i~~ag~~ 88 (245)
T PRK07060 82 VNCAGIA 88 (245)
T ss_pred EECCCCC
Confidence 9999864
No 394
>PRK05650 short chain dehydrogenase; Provisional
Probab=97.19 E-value=0.0032 Score=58.03 Aligned_cols=81 Identities=19% Similarity=0.215 Sum_probs=59.1
Q ss_pred EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
++||+|+ |++|..+++.+...|++ |++++|+.++.+.+ +..+.+..+...|..+.+++.+.+.++.. ..++|+
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~ 80 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWR-LALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDV 80 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 6899999 99999999999999997 88888887765543 33354444444455566677776665533 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|+++|..
T Consensus 81 lI~~ag~~ 88 (270)
T PRK05650 81 IVNNAGVA 88 (270)
T ss_pred EEECCCCC
Confidence 99999854
No 395
>PRK06128 oxidoreductase; Provisional
Probab=97.19 E-value=0.0029 Score=59.37 Aligned_cols=83 Identities=22% Similarity=0.227 Sum_probs=58.3
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh--h----HHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH--K----LKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~--~----~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.+.++||+|+ |++|..+++.+...|++ |+++.++.+ + .+.+++.|....+...|..+.+++++.+.++.. .
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~-V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGAD-IALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCE-EEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 3578999999 99999999999999997 666655432 1 123344565444444555666777777766543 2
Q ss_pred CCCceEEEcccc
Q psy1413 388 EQPDKTIDCSGI 399 (408)
Q Consensus 388 ~~~d~i~d~~g~ 399 (408)
.++|++|+++|.
T Consensus 133 g~iD~lV~nAg~ 144 (300)
T PRK06128 133 GGLDILVNIAGK 144 (300)
T ss_pred CCCCEEEECCcc
Confidence 479999999985
No 396
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.18 E-value=0.0029 Score=57.78 Aligned_cols=82 Identities=21% Similarity=0.157 Sum_probs=56.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
.+.+++|+|+ |++|..+++.+...|++ |+++.+ ++++.+.+++.+.. +-.-|..+.+++++.+.++.. ..++|+
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~--~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 82 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAK-VAVLYNSAENEAKELREKGVF--TIKCDVGNRDQVKKSKEVVEKEFGRVDV 82 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcHHHHHHHHhCCCe--EEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence 3578999999 99999999999999998 655544 44444555444432 222344456777777766543 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|+++|..
T Consensus 83 li~~ag~~ 90 (255)
T PRK06463 83 LVNNAGIM 90 (255)
T ss_pred EEECCCcC
Confidence 99999863
No 397
>TIGR00936 ahcY adenosylhomocysteinase. This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).
Probab=97.18 E-value=0.0017 Score=62.99 Aligned_cols=75 Identities=23% Similarity=0.297 Sum_probs=58.7
Q ss_pred cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413 314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393 (408)
Q Consensus 314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i 393 (408)
...+++++|+|.|.+|+.+++.++.+|++ |+++++++.+...+...|+. +.+ +.+.+ ++.|++
T Consensus 192 ~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~-ViV~d~dp~r~~~A~~~G~~-v~~---------leeal------~~aDVV 254 (406)
T TIGR00936 192 LIAGKTVVVAGYGWCGKGIAMRARGMGAR-VIVTEVDPIRALEAAMDGFR-VMT---------MEEAA------KIGDIF 254 (406)
T ss_pred CCCcCEEEEECCCHHHHHHHHHHhhCcCE-EEEEeCChhhHHHHHhcCCE-eCC---------HHHHH------hcCCEE
Confidence 46789999999999999999999999997 88898888887777777763 221 11222 357999
Q ss_pred EEcccchhhhhh
Q psy1413 394 IDCSGIESTIKL 405 (408)
Q Consensus 394 ~d~~g~~~~~~~ 405 (408)
|+++|....++.
T Consensus 255 ItaTG~~~vI~~ 266 (406)
T TIGR00936 255 ITATGNKDVIRG 266 (406)
T ss_pred EECCCCHHHHHH
Confidence 999998887764
No 398
>PRK05855 short chain dehydrogenase; Validated
Probab=97.17 E-value=0.0026 Score=65.34 Aligned_cols=84 Identities=27% Similarity=0.285 Sum_probs=63.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+.++++.+ ++.|....+-..|..+.+++++.+.++.. .++
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 392 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAE-VVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGV 392 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 4578999999 99999999999999998 88899988776543 33454444444566667777777777643 346
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|+++|..
T Consensus 393 id~lv~~Ag~~ 403 (582)
T PRK05855 393 PDIVVNNAGIG 403 (582)
T ss_pred CcEEEECCccC
Confidence 99999999864
No 399
>PRK12937 short chain dehydrogenase; Provisional
Probab=97.16 E-value=0.0037 Score=56.55 Aligned_cols=84 Identities=14% Similarity=0.092 Sum_probs=56.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
.+.+++|+|+ |++|..+++.+...|++ ++++.++ ..+.+ .++..+....+...|..+.+++.+.+.++.. .+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFA-VAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG 82 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4578999999 99999999999999998 5555554 33222 2333454333334455556777776666532 24
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
++|++|++.|..
T Consensus 83 ~id~vi~~ag~~ 94 (245)
T PRK12937 83 RIDVLVNNAGVM 94 (245)
T ss_pred CCCEEEECCCCC
Confidence 799999999853
No 400
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=97.16 E-value=0.0035 Score=56.97 Aligned_cols=82 Identities=20% Similarity=0.238 Sum_probs=54.9
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc--CCCCc
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ--GEQPD 391 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--~~~~d 391 (408)
+.++||+|+ |++|..+++.+...|++ |+++ .++.++.+.+ .+++....+-..|..+.+++.+.+.++.. +.++|
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~-vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id 83 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGAR-VVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT 83 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence 468999999 99999999999999998 5554 4455554443 33443333333444556666666665432 33499
Q ss_pred eEEEcccc
Q psy1413 392 KTIDCSGI 399 (408)
Q Consensus 392 ~i~d~~g~ 399 (408)
++|++.|.
T Consensus 84 ~li~~ag~ 91 (253)
T PRK08642 84 TVVNNALA 91 (253)
T ss_pred EEEECCCc
Confidence 99999875
No 401
>PRK07775 short chain dehydrogenase; Provisional
Probab=97.14 E-value=0.0043 Score=57.39 Aligned_cols=84 Identities=15% Similarity=0.156 Sum_probs=59.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
+..+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++.+....+-.-|..+.+++.+.+.++.. ..+
T Consensus 9 ~~~~vlVtGa~g~iG~~la~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 87 (274)
T PRK07775 9 DRRPALVAGASSGIGAATAIELAAAGFP-VALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGE 87 (274)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 3468999999 99999999999999996 88888876655433 23354433333455566777777766532 247
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|+++|..
T Consensus 88 id~vi~~Ag~~ 98 (274)
T PRK07775 88 IEVLVSGAGDT 98 (274)
T ss_pred CCEEEECCCcC
Confidence 89999999864
No 402
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=97.14 E-value=0.0037 Score=56.44 Aligned_cols=83 Identities=24% Similarity=0.224 Sum_probs=55.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
.+.++||+|+ |++|..+++++...|++ |+++.++.. +.+ .++..+....+...|..+.+++.+.+.++.. ..
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 82 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGAN-VVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFG 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 3468999999 99999999999999998 655555543 222 2233344433333444556666666665543 24
Q ss_pred CCceEEEcccc
Q psy1413 389 QPDKTIDCSGI 399 (408)
Q Consensus 389 ~~d~i~d~~g~ 399 (408)
++|.+|+++|.
T Consensus 83 ~id~vi~~ag~ 93 (248)
T PRK05557 83 GVDILVNNAGI 93 (248)
T ss_pred CCCEEEECCCc
Confidence 78999999985
No 403
>PRK06701 short chain dehydrogenase; Provisional
Probab=97.13 E-value=0.0038 Score=58.34 Aligned_cols=85 Identities=18% Similarity=0.198 Sum_probs=59.0
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhh-HH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHK-LK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~-~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
-.+.++||+|+ |++|..+++.+...|++ |++++++..+ .+ .++..|....+...|..+.+++.+.+.++.. .
T Consensus 44 ~~~k~iLItGasggIG~~la~~l~~~G~~-V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~ 122 (290)
T PRK06701 44 LKGKVALITGGDSGIGRAVAVLFAKEGAD-IAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVREL 122 (290)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 34678999999 99999999999999997 7778776432 22 2233454444444555566777777666543 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
.++|++|+++|..
T Consensus 123 ~~iD~lI~~Ag~~ 135 (290)
T PRK06701 123 GRLDILVNNAAFQ 135 (290)
T ss_pred CCCCEEEECCccc
Confidence 4789999999853
No 404
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=97.13 E-value=0.0043 Score=56.30 Aligned_cols=83 Identities=19% Similarity=0.226 Sum_probs=59.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
++.++||+|+ |++|..+++.+...|++ |++++++.++.+.+ ++.+....+-.-+..+.+++++.+.++.. ..+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~ 80 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAK-VAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGP 80 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999 99999999999999997 88888887665443 22343333333444456677777666543 247
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|++|++.|.
T Consensus 81 ~d~vi~~ag~ 90 (250)
T TIGR03206 81 VDVLVNNAGW 90 (250)
T ss_pred CCEEEECCCC
Confidence 8999999985
No 405
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=97.12 E-value=0.0041 Score=56.59 Aligned_cols=82 Identities=29% Similarity=0.366 Sum_probs=58.0
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH----cCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE----MGADATVLIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~----~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
.++||+|+ |++|..+++.+...|++ |++++|+.++.+.+.+ .+....+-.-|..+.+++.+.+.++.. ..++|
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 80 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGAN-VVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLD 80 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999 99999999999999996 8989998776655432 333333333344455666666655532 34689
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
.+|.+.|..
T Consensus 81 ~vi~~a~~~ 89 (255)
T TIGR01963 81 ILVNNAGIQ 89 (255)
T ss_pred EEEECCCCC
Confidence 999998754
No 406
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.11 E-value=0.0034 Score=57.53 Aligned_cols=84 Identities=18% Similarity=0.199 Sum_probs=58.1
Q ss_pred CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecCh---hhHHHH-HHc-CCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413 316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILE---HKLKTA-KEM-GADATVLIDRNHSLEEISTHIIELLQ- 386 (408)
Q Consensus 316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~---~~~~~~-~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~- 386 (408)
.++++||+|+ +++|..+++.+...|++ |++++|+. ++++.+ +++ +.......-|..+.+++++.+.++..
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 84 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAK-LVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEE 84 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHh
Confidence 4678999997 49999999999999997 77776643 334433 333 32333334455667777777777654
Q ss_pred CCCCceEEEcccch
Q psy1413 387 GEQPDKTIDCSGIE 400 (408)
Q Consensus 387 ~~~~d~i~d~~g~~ 400 (408)
-.++|++++++|..
T Consensus 85 ~g~ld~lv~nag~~ 98 (257)
T PRK08594 85 VGVIHGVAHCIAFA 98 (257)
T ss_pred CCCccEEEECcccC
Confidence 25799999999853
No 407
>PRK09134 short chain dehydrogenase; Provisional
Probab=97.10 E-value=0.0047 Score=56.46 Aligned_cols=83 Identities=17% Similarity=0.153 Sum_probs=56.2
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
.+.++||+|+ |++|..+++.+...|++ ++++.+ +.++.+.+ +..+....+...|..+.+++.+.+.++.. ..
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 86 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFD-VAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALG 86 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4578999999 99999999999999997 555544 44444332 22344433334455556777776666532 24
Q ss_pred CCceEEEcccc
Q psy1413 389 QPDKTIDCSGI 399 (408)
Q Consensus 389 ~~d~i~d~~g~ 399 (408)
++|++|++.|.
T Consensus 87 ~iD~vi~~ag~ 97 (258)
T PRK09134 87 PITLLVNNASL 97 (258)
T ss_pred CCCEEEECCcC
Confidence 79999999985
No 408
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=97.10 E-value=0.0041 Score=56.39 Aligned_cols=83 Identities=20% Similarity=0.285 Sum_probs=56.4
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhcC-CC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQG-EQ 389 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~-~~ 389 (408)
+.+++|+|+ |++|..+++.+...|++ ++++ .+++++.+.. ++.+....+-.-|..+.+++.+.+.++... ..
T Consensus 6 ~~~~lItG~s~~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 6 GKVAIVTGGAKGIGKAITVALAQEGAK-VVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCE-EEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 679999999 99999999999999998 5544 3444444332 334444433344555566676666665432 46
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|+++|..
T Consensus 85 id~vi~~ag~~ 95 (247)
T PRK12935 85 VDILVNNAGIT 95 (247)
T ss_pred CCEEEECCCCC
Confidence 89999999863
No 409
>KOG1209|consensus
Probab=97.10 E-value=0.0019 Score=55.67 Aligned_cols=87 Identities=20% Similarity=0.177 Sum_probs=64.7
Q ss_pred CCCCEEEEEec--chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcC-CCeEEecCCCCChHHHHHHHHHHhcCCCC
Q psy1413 315 TLGSKVLITGA--GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMG-ADATVLIDRNHSLEEISTHIIELLQGEQP 390 (408)
Q Consensus 315 ~~~~~~lv~G~--G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~g-a~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 390 (408)
+....+||+|+ ||+|..++.-....|.+ |++++|+-+..+.+. ++| -..-+|-.++.+...+...+++.+ .+..
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~-V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~-~Gkl 82 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFARNGYL-VYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANP-DGKL 82 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHHhCCeE-EEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCC-CCce
Confidence 34567899986 99999999999999998 999999988877664 677 344566655444555566666665 3479
Q ss_pred ceEEEcccchhhh
Q psy1413 391 DKTIDCSGIESTI 403 (408)
Q Consensus 391 d~i~d~~g~~~~~ 403 (408)
|+.+|..|.+-++
T Consensus 83 d~L~NNAG~~C~~ 95 (289)
T KOG1209|consen 83 DLLYNNAGQSCTF 95 (289)
T ss_pred EEEEcCCCCCccc
Confidence 9999988865443
No 410
>PRK07102 short chain dehydrogenase; Provisional
Probab=97.09 E-value=0.0039 Score=56.43 Aligned_cols=80 Identities=18% Similarity=0.128 Sum_probs=57.0
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HH---c-CCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KE---M-GADATVLIDRNHSLEEISTHIIELLQGEQPD 391 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~---~-ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d 391 (408)
.+++|+|+ |++|..+++.+...|++ |++++|++++.+.. ++ . +....+-..|..+.+++++.+.++. ..+|
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~-Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~--~~~d 78 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGAR-LYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP--ALPD 78 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCE-EEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh--hcCC
Confidence 47999999 99999999999999987 88899988766443 22 1 2222233344455677777777664 3579
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
.+++++|..
T Consensus 79 ~vv~~ag~~ 87 (243)
T PRK07102 79 IVLIAVGTL 87 (243)
T ss_pred EEEECCcCC
Confidence 999988753
No 411
>PRK06398 aldose dehydrogenase; Validated
Probab=97.09 E-value=0.0025 Score=58.38 Aligned_cols=76 Identities=21% Similarity=0.248 Sum_probs=54.5
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI 394 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~ 394 (408)
+.++||+|+ |++|..+++.+...|++ |++++|++.+.. ...+-..|..+.+++++.+.++.. ..++|++|
T Consensus 6 gk~vlItGas~gIG~~ia~~l~~~G~~-Vi~~~r~~~~~~-------~~~~~~~D~~~~~~i~~~~~~~~~~~~~id~li 77 (258)
T PRK06398 6 DKVAIVTGGSQGIGKAVVNRLKEEGSN-VINFDIKEPSYN-------DVDYFKVDVSNKEQVIKGIDYVISKYGRIDILV 77 (258)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCe-EEEEeCCccccC-------ceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 578999999 99999999999999997 888888765432 111222344455666666666543 24699999
Q ss_pred Ecccch
Q psy1413 395 DCSGIE 400 (408)
Q Consensus 395 d~~g~~ 400 (408)
++.|..
T Consensus 78 ~~Ag~~ 83 (258)
T PRK06398 78 NNAGIE 83 (258)
T ss_pred ECCCCC
Confidence 999853
No 412
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=97.08 E-value=0.0038 Score=62.89 Aligned_cols=83 Identities=17% Similarity=0.194 Sum_probs=56.7
Q ss_pred ccCcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH---------cCCC----eEEecCCCCChHH
Q psy1413 311 RAGVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE---------MGAD----ATVLIDRNHSLEE 376 (408)
Q Consensus 311 ~~~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~---------~ga~----~~i~~~~~~~~~~ 376 (408)
....+.++++||+|+ |++|+.+++.+...|++ |++++|+.++.+.+.+ .|.. ..+...|..+.++
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~-Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~es 152 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFR-VRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQ 152 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCe-EEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHH
Confidence 455678899999999 99999999999999997 8888899887654322 1211 1222233333444
Q ss_pred HHHHHHHHhcCCCCceEEEcccch
Q psy1413 377 ISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 377 ~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
+.+ +. +++|++|++.|..
T Consensus 153 I~~----aL--ggiDiVVn~AG~~ 170 (576)
T PLN03209 153 IGP----AL--GNASVVICCIGAS 170 (576)
T ss_pred HHH----Hh--cCCCEEEEccccc
Confidence 433 22 4799999999864
No 413
>PRK09291 short chain dehydrogenase; Provisional
Probab=97.08 E-value=0.0029 Score=57.74 Aligned_cols=77 Identities=18% Similarity=0.165 Sum_probs=51.6
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQGEQPD 391 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d 391 (408)
+.++||+|+ |++|..+++.+...|++ |++++|+..+.+.+. +.+....+..-|..+.+++.+.+ ..++|
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~-----~~~id 75 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHN-VIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAA-----EWDVD 75 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHh-----cCCCC
Confidence 357999999 99999999999999987 888888876654442 23333222222323334443322 23799
Q ss_pred eEEEcccc
Q psy1413 392 KTIDCSGI 399 (408)
Q Consensus 392 ~i~d~~g~ 399 (408)
.+|++.|.
T Consensus 76 ~vi~~ag~ 83 (257)
T PRK09291 76 VLLNNAGI 83 (257)
T ss_pred EEEECCCc
Confidence 99999884
No 414
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.08 E-value=0.0038 Score=57.27 Aligned_cols=83 Identities=22% Similarity=0.163 Sum_probs=57.4
Q ss_pred CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChh---hHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEH---KLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ + ++|..+++.+...|++ |++.++++. +.+.+ ++.|.... ..-|..+.+++++.+.++.. .
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~-v~~~~r~~~~~~~~~~l~~~~g~~~~-~~~Dv~~~~~v~~~~~~~~~~~ 84 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAE-LWFTYQSEVLEKRVKPLAEEIGCNFV-SELDVTNPKSISNLFDDIKEKW 84 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCE-EEEEeCchHHHHHHHHHHHhcCCceE-EEccCCCHHHHHHHHHHHHHHc
Confidence 4678999998 5 8999999999889997 777777642 22222 23354332 23455566777777777654 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
..+|+++++.|..
T Consensus 85 g~iDilVnnag~~ 97 (260)
T PRK06603 85 GSFDFLLHGMAFA 97 (260)
T ss_pred CCccEEEEccccC
Confidence 4799999998853
No 415
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.07 E-value=0.004 Score=57.04 Aligned_cols=83 Identities=17% Similarity=0.174 Sum_probs=58.6
Q ss_pred CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChhhH---HHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEHKL---KTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~~~---~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ + ++|..+++.+...|++ |++++|+.+.. +.+ ++++.... ...|..+.+++++.+.++.. .
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~-~~~D~~~~~~v~~~~~~~~~~~ 86 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAE-LAVTYLNDKARPYVEPLAEELDAPIF-LPLDVREPGQLEAVFARIAEEW 86 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHHHhhccceE-EecCcCCHHHHHHHHHHHHHHc
Confidence 4678999997 3 8999999999999997 88888875432 222 33443222 23455667788877777654 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
+++|++++++|..
T Consensus 87 g~ld~lv~nAg~~ 99 (258)
T PRK07533 87 GRLDFLLHSIAFA 99 (258)
T ss_pred CCCCEEEEcCccC
Confidence 4799999999853
No 416
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.07 E-value=0.0046 Score=56.86 Aligned_cols=83 Identities=19% Similarity=0.218 Sum_probs=57.6
Q ss_pred CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecChh---hHHHHHH-cCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDILEH---KLKTAKE-MGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~~~-~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ + ++|..+++.+...|++ |++.++++. ..+.+.+ .+.... ...|..+.+++++.+.++.. .
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~-vil~~r~~~~~~~~~~~~~~~~~~~~-~~~Dl~~~~~v~~~~~~~~~~~ 82 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAE-LAFTYQNDKLKGRVEEFAAQLGSDIV-LPCDVAEDASIDAMFAELGKVW 82 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCE-EEEEecchhHHHHHHHHHhccCCceE-eecCCCCHHHHHHHHHHHHhhc
Confidence 4678999998 4 8999999999999997 887877632 2223322 232222 23455667888888877654 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
..+|++|+++|..
T Consensus 83 g~iD~linnAg~~ 95 (262)
T PRK07984 83 PKFDGFVHSIGFA 95 (262)
T ss_pred CCCCEEEECCccC
Confidence 4699999999853
No 417
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=97.07 E-value=0.0047 Score=55.89 Aligned_cols=83 Identities=22% Similarity=0.194 Sum_probs=57.4
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
+++||+|+ |++|..+++.+...|++.++...++.++.+. ++..+....+-..|..+.+++.+.+.++.. ..++|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 47899999 9999999999999999833334566555432 233444333334455566777777777642 45799
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
.+|+++|..
T Consensus 82 ~vi~~ag~~ 90 (247)
T PRK09730 82 ALVNNAGIL 90 (247)
T ss_pred EEEECCCCC
Confidence 999999853
No 418
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=97.06 E-value=0.0045 Score=56.15 Aligned_cols=82 Identities=26% Similarity=0.219 Sum_probs=56.5
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
+++||+|+ |++|..+++.+...|++ ++++ .++.++.+. +++.+....+-..|..+.+++.+.+.++.. ..++
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWS-VGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRL 81 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence 47999999 99999999999999998 5544 455554433 233444444444455566777777766543 2479
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|++|+++|..
T Consensus 82 d~li~~ag~~ 91 (248)
T PRK06947 82 DALVNNAGIV 91 (248)
T ss_pred CEEEECCccC
Confidence 9999999854
No 419
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=97.06 E-value=0.0044 Score=57.41 Aligned_cols=83 Identities=19% Similarity=0.168 Sum_probs=59.1
Q ss_pred CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChh---hHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILEH---KLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ +++|+.+++.+...|++ |++++|++. +.+.+ ++++.... -.-|..+.+++++.+.++.. .
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~-Vil~~r~~~~~~~~~~~~~~~~~~~~-~~~Dv~d~~~v~~~~~~i~~~~ 81 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAE-LAFTYLNEALKKRVEPIAQELGSDYV-YELDVSKPEHFKSLAESLKKDL 81 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCE-EEEEecCHHHHHHHHHHHHhcCCceE-EEecCCCHHHHHHHHHHHHHHc
Confidence 3678999997 49999999999999997 888888742 33333 44554432 23455566777777777654 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
..+|+++++.|..
T Consensus 82 g~iDilVnnAG~~ 94 (274)
T PRK08415 82 GKIDFIVHSVAFA 94 (274)
T ss_pred CCCCEEEECCccC
Confidence 5799999999863
No 420
>PRK12742 oxidoreductase; Provisional
Probab=97.05 E-value=0.0033 Score=56.54 Aligned_cols=79 Identities=23% Similarity=0.241 Sum_probs=53.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~ 392 (408)
.++++||+|+ |++|..+++.+...|++ ++++.+ +.++.+.+ ++.+...+ . -|..+.+++.+.+.+ ..++|+
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~-v~~~~~~~~~~~~~l~~~~~~~~~-~-~D~~~~~~~~~~~~~---~~~id~ 78 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGAN-VRFTYAGSKDAAERLAQETGATAV-Q-TDSADRDAVIDVVRK---SGALDI 78 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCE-EEEecCCCHHHHHHHHHHhCCeEE-e-cCCCCHHHHHHHHHH---hCCCcE
Confidence 3678999999 99999999999999997 666654 44555444 44555432 1 222334455555543 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|+++|..
T Consensus 79 li~~ag~~ 86 (237)
T PRK12742 79 LVVNAGIA 86 (237)
T ss_pred EEECCCCC
Confidence 99999864
No 421
>PRK06483 dihydromonapterin reductase; Provisional
Probab=97.04 E-value=0.0047 Score=55.58 Aligned_cols=80 Identities=24% Similarity=0.215 Sum_probs=57.4
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH-HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL-KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT 393 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i 393 (408)
.+++||+|+ |++|..+++.+...|++ |++++|+.++. +.+++.|+. .+ ..|..+.+++++.+.++.. ..++|.+
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~-~~-~~D~~~~~~~~~~~~~~~~~~~~id~l 78 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQP-VIVSYRTHYPAIDGLRQAGAQ-CI-QADFSTNAGIMAFIDELKQHTDGLRAI 78 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHHcCCE-EE-EcCCCCHHHHHHHHHHHHhhCCCccEE
Confidence 357999999 99999999999999997 88888876543 444555542 22 2344456677777766643 2469999
Q ss_pred EEcccc
Q psy1413 394 IDCSGI 399 (408)
Q Consensus 394 ~d~~g~ 399 (408)
+++.|.
T Consensus 79 v~~ag~ 84 (236)
T PRK06483 79 IHNASD 84 (236)
T ss_pred EECCcc
Confidence 999985
No 422
>PRK08703 short chain dehydrogenase; Provisional
Probab=97.04 E-value=0.0035 Score=56.55 Aligned_cols=83 Identities=20% Similarity=0.296 Sum_probs=53.8
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-H---HcCC-C---eEEecCCCCChHHHHHHHHHHhc
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-K---EMGA-D---ATVLIDRNHSLEEISTHIIELLQ 386 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~---~~ga-~---~~i~~~~~~~~~~~~~~~~~~~~ 386 (408)
++.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+ . +.+. + ..+|..+ .+.+++.+.+.++..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~-~~~~~~~~~~~~i~~ 82 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGAT-VILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMS-AEEKEFEQFAATIAE 82 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCE-EEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecc-cchHHHHHHHHHHHH
Confidence 3578999999 99999999999999997 99999988776543 2 2221 1 1133221 112334443333322
Q ss_pred --CCCCceEEEcccch
Q psy1413 387 --GEQPDKTIDCSGIE 400 (408)
Q Consensus 387 --~~~~d~i~d~~g~~ 400 (408)
...+|.+|+++|..
T Consensus 83 ~~~~~id~vi~~ag~~ 98 (239)
T PRK08703 83 ATQGKLDGIVHCAGYF 98 (239)
T ss_pred HhCCCCCEEEEecccc
Confidence 13689999999853
No 423
>PRK06523 short chain dehydrogenase; Provisional
Probab=97.03 E-value=0.0037 Score=57.17 Aligned_cols=78 Identities=21% Similarity=0.173 Sum_probs=54.9
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT 393 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i 393 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+..+. .+....+...|..+.+++++.+.++.. ..++|++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~r~~~~~-----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 81 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGAR-VVTTARSRPDD-----LPEGVEFVAADLTTAEGCAAVARAVLERLGGVDIL 81 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCE-EEEEeCChhhh-----cCCceeEEecCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999999 99999999999999997 88888875432 222222233344455666666655533 2479999
Q ss_pred EEcccc
Q psy1413 394 IDCSGI 399 (408)
Q Consensus 394 ~d~~g~ 399 (408)
|++.|.
T Consensus 82 i~~ag~ 87 (260)
T PRK06523 82 VHVLGG 87 (260)
T ss_pred EECCcc
Confidence 999984
No 424
>KOG1201|consensus
Probab=97.03 E-value=0.005 Score=56.21 Aligned_cols=84 Identities=25% Similarity=0.280 Sum_probs=59.1
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH----HHHHHcCCCeEEe-cCCCCChHHHHHHHHHHhcC-
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL----KTAKEMGADATVL-IDRNHSLEEISTHIIELLQG- 387 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~----~~~~~~ga~~~i~-~~~~~~~~~~~~~~~~~~~~- 387 (408)
-.++.+||+|+ +|+|+.+++-...+|++ +++.|.+.+-. ++.++.| .+.. ..|.++.+++.+..++....
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~-~vl~Din~~~~~etv~~~~~~g--~~~~y~cdis~~eei~~~a~~Vk~e~ 112 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAK-LVLWDINKQGNEETVKEIRKIG--EAKAYTCDISDREEIYRLAKKVKKEV 112 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCe-EEEEeccccchHHHHHHHHhcC--ceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 46689999998 99999999999999995 88888875443 3344445 1111 23344567777766666542
Q ss_pred CCCceEEEcccchh
Q psy1413 388 EQPDKTIDCSGIES 401 (408)
Q Consensus 388 ~~~d~i~d~~g~~~ 401 (408)
+.+|+++|.+|...
T Consensus 113 G~V~ILVNNAGI~~ 126 (300)
T KOG1201|consen 113 GDVDILVNNAGIVT 126 (300)
T ss_pred CCceEEEecccccc
Confidence 47899999999754
No 425
>PRK07577 short chain dehydrogenase; Provisional
Probab=97.02 E-value=0.0031 Score=56.61 Aligned_cols=76 Identities=21% Similarity=0.250 Sum_probs=55.4
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID 395 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d 395 (408)
+++++|+|+ |++|..+++.+...|.+ |++++|+..+ .+.. .++ .-|..+.+++++.+.++....++|.+|+
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~-v~~~~r~~~~-----~~~~-~~~-~~D~~~~~~~~~~~~~~~~~~~~d~vi~ 74 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQ-VIGIARSAID-----DFPG-ELF-ACDLADIEQTAATLAQINEIHPVDAIVN 74 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCE-EEEEeCCccc-----ccCc-eEE-EeeCCCHHHHHHHHHHHHHhCCCcEEEE
Confidence 568999999 99999999999999986 8888887654 1121 222 2233445777777777665557899999
Q ss_pred cccch
Q psy1413 396 CSGIE 400 (408)
Q Consensus 396 ~~g~~ 400 (408)
+.|..
T Consensus 75 ~ag~~ 79 (234)
T PRK07577 75 NVGIA 79 (234)
T ss_pred CCCCC
Confidence 99863
No 426
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=97.01 E-value=0.0032 Score=61.54 Aligned_cols=76 Identities=18% Similarity=0.277 Sum_probs=56.9
Q ss_pred CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413 315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKT 393 (408)
Q Consensus 315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i 393 (408)
-.+.+++|+|+|+.|..++..+...|+.++.++.|+.++.+.+ ++++...++.+ +++.+.+ ..+|+|
T Consensus 179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~------~~l~~~l------~~aDiV 246 (414)
T PRK13940 179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL------SELPQLI------KKADII 246 (414)
T ss_pred ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH------HHHHHHh------ccCCEE
Confidence 3567899999999999999999999999899999998886655 55652223322 3332222 358999
Q ss_pred EEcccchhh
Q psy1413 394 IDCSGIEST 402 (408)
Q Consensus 394 ~d~~g~~~~ 402 (408)
|+|++.++.
T Consensus 247 I~aT~a~~~ 255 (414)
T PRK13940 247 IAAVNVLEY 255 (414)
T ss_pred EECcCCCCe
Confidence 999998765
No 427
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=97.00 E-value=0.0046 Score=56.68 Aligned_cols=84 Identities=23% Similarity=0.201 Sum_probs=56.0
Q ss_pred CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecC------hhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc
Q psy1413 316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDIL------EHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ 386 (408)
Q Consensus 316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~------~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~ 386 (408)
.+++++|+|+ +++|+.+++.+...|++ |+++.++ ++..+.+.+.+.......-|..+.+++++.+.++..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~ 83 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAE-LGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQ 83 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCE-EEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHH
Confidence 4678999996 49999999999999998 6666443 222333333332222233455566777777776643
Q ss_pred -CCCCceEEEcccch
Q psy1413 387 -GEQPDKTIDCSGIE 400 (408)
Q Consensus 387 -~~~~d~i~d~~g~~ 400 (408)
..++|+++++.|..
T Consensus 84 ~~g~iD~lv~nag~~ 98 (258)
T PRK07370 84 KWGKLDILVHCLAFA 98 (258)
T ss_pred HcCCCCEEEEccccc
Confidence 24799999999854
No 428
>PRK07985 oxidoreductase; Provisional
Probab=96.99 E-value=0.0052 Score=57.55 Aligned_cols=83 Identities=20% Similarity=0.165 Sum_probs=57.8
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh--hhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE--HKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.+.++||+|+ |++|..+++.+...|++ |+++.++. ++.+.+ ++.|....+...|..+.+++.+.+.++.. .
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~-Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 126 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGAD-VAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKAL 126 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCE-EEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4578999999 99999999999999998 77766542 233322 33454433334455566777777776643 3
Q ss_pred CCCceEEEcccc
Q psy1413 388 EQPDKTIDCSGI 399 (408)
Q Consensus 388 ~~~d~i~d~~g~ 399 (408)
+++|+++++.|.
T Consensus 127 g~id~lv~~Ag~ 138 (294)
T PRK07985 127 GGLDIMALVAGK 138 (294)
T ss_pred CCCCEEEECCCC
Confidence 579999999885
No 429
>KOG0725|consensus
Probab=96.98 E-value=0.0059 Score=56.26 Aligned_cols=86 Identities=21% Similarity=0.251 Sum_probs=63.3
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH----HcCCC---eEEecCCCCChHHHHHHHHHHhc
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK----EMGAD---ATVLIDRNHSLEEISTHIIELLQ 386 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~----~~ga~---~~i~~~~~~~~~~~~~~~~~~~~ 386 (408)
-.+.++||+|+ .|+|..+++.+...|++ |++++|+.++.+..+ ..+.+ ......|..+.++.++.+.....
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~-v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~ 84 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAK-VVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVE 84 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHH
Confidence 35678899999 99999999999999998 888999988765432 23332 34444555556777777777655
Q ss_pred C--CCCceEEEcccchh
Q psy1413 387 G--EQPDKTIDCSGIES 401 (408)
Q Consensus 387 ~--~~~d~i~d~~g~~~ 401 (408)
. +.+|+.+++.|...
T Consensus 85 ~~~GkidiLvnnag~~~ 101 (270)
T KOG0725|consen 85 KFFGKIDILVNNAGALG 101 (270)
T ss_pred HhCCCCCEEEEcCCcCC
Confidence 3 57999999998654
No 430
>PRK06179 short chain dehydrogenase; Provisional
Probab=96.98 E-value=0.0035 Score=57.72 Aligned_cols=79 Identities=19% Similarity=0.187 Sum_probs=56.3
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceEE
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKTI 394 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i~ 394 (408)
+.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.. .+.. +-.-|..+.+++++.+.++.. ...+|++|
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~-V~~~~r~~~~~~~~--~~~~--~~~~D~~d~~~~~~~~~~~~~~~g~~d~li 78 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYR-VFGTSRNPARAAPI--PGVE--LLELDVTDDASVQAAVDEVIARAGRIDVLV 78 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCE-EEEEeCChhhcccc--CCCe--eEEeecCCHHHHHHHHHHHHHhCCCCCEEE
Confidence 468999999 99999999999999997 88888886654422 1222 112334456777777766543 24699999
Q ss_pred Ecccch
Q psy1413 395 DCSGIE 400 (408)
Q Consensus 395 d~~g~~ 400 (408)
++.|..
T Consensus 79 ~~ag~~ 84 (270)
T PRK06179 79 NNAGVG 84 (270)
T ss_pred ECCCCC
Confidence 999863
No 431
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.97 E-value=0.0053 Score=56.34 Aligned_cols=83 Identities=23% Similarity=0.319 Sum_probs=58.2
Q ss_pred CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecChh---hHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILEH---KLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~~---~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ +++|+.+++.+...|++ |++..+++. +++.+. +.|... ....|..+.+++++.+.++.. .
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~~~~~~ 82 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAE-LAFTYVVDKLEERVRKMAAELDSEL-VFRCDVASDDEINQVFADLGKHW 82 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCcHHHHHHHHHHHhccCCce-EEECCCCCHHHHHHHHHHHHHHh
Confidence 4678999994 59999999999999997 777766543 233332 234322 334566677888888877654 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
.++|++++++|..
T Consensus 83 g~iD~lVnnAG~~ 95 (261)
T PRK08690 83 DGLDGLVHSIGFA 95 (261)
T ss_pred CCCcEEEECCccC
Confidence 5799999999864
No 432
>PRK05884 short chain dehydrogenase; Provisional
Probab=96.97 E-value=0.0054 Score=54.84 Aligned_cols=75 Identities=21% Similarity=0.254 Sum_probs=55.6
Q ss_pred EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413 319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396 (408)
Q Consensus 319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~ 396 (408)
+++|+|+ |++|+.+++.+...|++ |++++|+.++++.+ ++++...+ ..|..+.+++++.++++. +.+|.++++
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~--~~D~~~~~~v~~~~~~~~--~~id~lv~~ 76 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHK-VTLVGARRDDLEVAAKELDVDAI--VCDNTDPASLEEARGLFP--HHLDTIVNV 76 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHhccCcEE--ecCCCCHHHHHHHHHHHh--hcCcEEEEC
Confidence 4899999 99999999999999997 88889988877655 44444322 234445667777766654 368999999
Q ss_pred cc
Q psy1413 397 SG 398 (408)
Q Consensus 397 ~g 398 (408)
.|
T Consensus 77 ag 78 (223)
T PRK05884 77 PA 78 (223)
T ss_pred CC
Confidence 77
No 433
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.97 E-value=0.0067 Score=54.81 Aligned_cols=83 Identities=29% Similarity=0.360 Sum_probs=57.3
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEE-ecChhhHHHHH----HcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVIT-DILEHKLKTAK----EMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~-~~~~~~~~~~~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
+.++||+|+ |++|..+++.+...|++ ++++ +|+.++.+.+. ..+....+...|..+.+++.+.+.++.. ..+
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~-v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAK-VVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGK 83 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 468999999 99999999999889998 6666 88776654332 2233333444455556666666655432 236
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|++|.+.|..
T Consensus 84 id~vi~~ag~~ 94 (247)
T PRK05565 84 IDILVNNAGIS 94 (247)
T ss_pred CCEEEECCCcC
Confidence 99999998854
No 434
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=96.96 E-value=0.0066 Score=52.26 Aligned_cols=69 Identities=17% Similarity=0.219 Sum_probs=49.9
Q ss_pred EEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEccc
Q psy1413 320 VLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSG 398 (408)
Q Consensus 320 ~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g 398 (408)
++|+|+ |.+|..+++.+...|.+ |.++.|++++.+. ..+.+. + .-+..+.+++.+.+ +++|.||++.|
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~-V~~~~R~~~~~~~--~~~~~~-~-~~d~~d~~~~~~al------~~~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHE-VTALVRSPSKAED--SPGVEI-I-QGDLFDPDSVKAAL------KGADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSE-EEEEESSGGGHHH--CTTEEE-E-ESCTTCHHHHHHHH------TTSSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHHHCCCE-EEEEecCchhccc--cccccc-c-eeeehhhhhhhhhh------hhcchhhhhhh
Confidence 689999 99999999999999976 9999999998877 333332 2 22323333333333 27999999997
Q ss_pred c
Q psy1413 399 I 399 (408)
Q Consensus 399 ~ 399 (408)
.
T Consensus 70 ~ 70 (183)
T PF13460_consen 70 P 70 (183)
T ss_dssp S
T ss_pred h
Confidence 4
No 435
>KOG1014|consensus
Probab=96.96 E-value=0.0047 Score=56.62 Aligned_cols=83 Identities=22% Similarity=0.306 Sum_probs=60.5
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-----HHcCCC---eEEecCCCCChHHHHHHHHHHh
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-----KEMGAD---ATVLIDRNHSLEEISTHIIELL 385 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-----~~~ga~---~~i~~~~~~~~~~~~~~~~~~~ 385 (408)
+-+++.+|+|+ .|+|.+-+.=+..+|.+ |++++|+.+|++.. +..++. .++|+.+ .+..-+.+++.+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAkrG~n-vvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~---~~~~ye~i~~~l 122 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAKRGFN-VVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTK---GDEVYEKLLEKL 122 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHHcCCE-EEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCC---CchhHHHHHHHh
Confidence 34588999999 99999999888889998 99999999998654 234422 2355544 222455566666
Q ss_pred cCCCCceEEEcccchh
Q psy1413 386 QGEQPDKTIDCSGIES 401 (408)
Q Consensus 386 ~~~~~d~i~d~~g~~~ 401 (408)
++-.+-+.+|++|-..
T Consensus 123 ~~~~VgILVNNvG~~~ 138 (312)
T KOG1014|consen 123 AGLDVGILVNNVGMSY 138 (312)
T ss_pred cCCceEEEEecccccC
Confidence 6778889999999654
No 436
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.95 E-value=0.0071 Score=54.60 Aligned_cols=82 Identities=21% Similarity=0.265 Sum_probs=54.3
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
..++||+|+ |++|..+++.+...|.+ ++++.++ ....+.+ .+.+....+...|..+.+++.+.+.+... ..+
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~ 84 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGAD-VVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGR 84 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCe-EEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCC
Confidence 468999999 99999999999999997 5555454 3333322 23343333333444456667766665532 247
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|.+|+++|.
T Consensus 85 id~vi~~ag~ 94 (249)
T PRK12825 85 IDILVNNAGI 94 (249)
T ss_pred CCEEEECCcc
Confidence 9999999984
No 437
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=96.93 E-value=0.0076 Score=55.18 Aligned_cols=84 Identities=23% Similarity=0.230 Sum_probs=57.0
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
.+.++||+|+ |++|..+++.+...|++ ++++.++. ++.+ .++..+....+...|..+.+++.+.+..+.. ..
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~-vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g 84 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAK-VVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFG 84 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4679999999 99999999999999998 66666643 3322 2233454333333445556777776666543 24
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
++|+++++.|..
T Consensus 85 ~id~lv~~ag~~ 96 (261)
T PRK08936 85 TLDVMINNAGIE 96 (261)
T ss_pred CCCEEEECCCCC
Confidence 799999999853
No 438
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=96.92 E-value=0.008 Score=54.16 Aligned_cols=82 Identities=22% Similarity=0.211 Sum_probs=54.9
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH-HH---cCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA-KE---MGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~-~~---~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
.++||+|+ |++|..+++.+...|++ ++++.+ +..+.+.. .+ .+....+...|..+.+++.+.+.++.. ...+
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 79 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYR-VAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPI 79 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 36899999 99999999999999997 666666 44443322 22 233333333444556667776666532 2468
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|.+|++.|..
T Consensus 80 d~vi~~ag~~ 89 (242)
T TIGR01829 80 DVLVNNAGIT 89 (242)
T ss_pred cEEEECCCCC
Confidence 9999999853
No 439
>PRK05599 hypothetical protein; Provisional
Probab=96.91 E-value=0.0072 Score=54.92 Aligned_cols=80 Identities=18% Similarity=0.152 Sum_probs=55.2
Q ss_pred EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCC-eEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGAD-ATVLIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~-~~i~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
+++|+|+ +++|..+++.+. .|++ |++++|+.++++.+ ++.|.+ ...-.-|..+.+++++.+.++.. .+++|
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~-Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 79 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGED-VVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEIS 79 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCE-EEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCC
Confidence 6899999 999999999887 5876 88889988776544 334433 22223344555666666655533 24799
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
+++++.|..
T Consensus 80 ~lv~nag~~ 88 (246)
T PRK05599 80 LAVVAFGIL 88 (246)
T ss_pred EEEEecCcC
Confidence 999999864
No 440
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=96.91 E-value=0.0074 Score=55.29 Aligned_cols=83 Identities=16% Similarity=0.108 Sum_probs=57.2
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH-H----HcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA-K----EMGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~-~----~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ +++|..+++.+...|++ |+++.+ +.++.+.. + +.+....+-.-|..+.+++++.+.++.. .
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 85 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVN-IAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDF 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 4678999999 99999999999999998 766654 44444322 2 2343333333445566777777777643 2
Q ss_pred CCCceEEEcccc
Q psy1413 388 EQPDKTIDCSGI 399 (408)
Q Consensus 388 ~~~d~i~d~~g~ 399 (408)
..+|+++++.|.
T Consensus 86 g~id~lv~nAg~ 97 (260)
T PRK08416 86 DRVDFFISNAII 97 (260)
T ss_pred CCccEEEECccc
Confidence 479999999874
No 441
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=96.90 E-value=0.0061 Score=58.91 Aligned_cols=73 Identities=29% Similarity=0.360 Sum_probs=52.4
Q ss_pred CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413 317 GSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID 395 (408)
Q Consensus 317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d 395 (408)
..+++|+|+|.+|+.+++.++.+|++ |++++++.++++.+. .++........ +.+++.+.+ +.+|++|+
T Consensus 167 ~~~VlViGaG~vG~~aa~~a~~lGa~-V~v~d~~~~~~~~l~~~~g~~v~~~~~---~~~~l~~~l------~~aDvVI~ 236 (370)
T TIGR00518 167 PGDVTIIGGGVVGTNAAKMANGLGAT-VTILDINIDRLRQLDAEFGGRIHTRYS---NAYEIEDAV------KRADLLIG 236 (370)
T ss_pred CceEEEEcCCHHHHHHHHHHHHCCCe-EEEEECCHHHHHHHHHhcCceeEeccC---CHHHHHHHH------ccCCEEEE
Confidence 35589999999999999999999996 999999988887764 45554322222 223343333 36899999
Q ss_pred cccc
Q psy1413 396 CSGI 399 (408)
Q Consensus 396 ~~g~ 399 (408)
|++.
T Consensus 237 a~~~ 240 (370)
T TIGR00518 237 AVLI 240 (370)
T ss_pred cccc
Confidence 9843
No 442
>PRK07023 short chain dehydrogenase; Provisional
Probab=96.90 E-value=0.0055 Score=55.42 Aligned_cols=80 Identities=15% Similarity=0.127 Sum_probs=54.5
Q ss_pred EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHH-H----hcCCCCce
Q psy1413 319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIE-L----LQGEQPDK 392 (408)
Q Consensus 319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~-~----~~~~~~d~ 392 (408)
++||+|+ |++|..+++.+...|++ |++++|+..+. ..+..+....+-.-|..+.+++++.+.+ . ......|.
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~-v~~~~r~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIA-VLGVARSRHPS-LAAAAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCE-EEEEecCcchh-hhhccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 6899999 99999999999999997 88888876542 2233444333333444556667665544 2 12346899
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|++.|..
T Consensus 81 ~v~~ag~~ 88 (243)
T PRK07023 81 LINNAGTV 88 (243)
T ss_pred EEEcCccc
Confidence 99998854
No 443
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=96.89 E-value=0.0088 Score=56.57 Aligned_cols=83 Identities=23% Similarity=0.275 Sum_probs=58.2
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC---CCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG---ADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
+.++||+|+ +++|..+++.+...|+.+|++++|+.++.+.+ +++. ....+..-|..+.+++++.+.++.. ..++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 568999999 99999999999999933488899988776544 3332 2222222344556677777666533 3479
Q ss_pred ceEEEcccc
Q psy1413 391 DKTIDCSGI 399 (408)
Q Consensus 391 d~i~d~~g~ 399 (408)
|++|+++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999999986
No 444
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=96.89 E-value=0.0049 Score=56.61 Aligned_cols=79 Identities=25% Similarity=0.336 Sum_probs=55.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT 393 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i 393 (408)
.++++||+|+ |++|..+++.+...|++ |++++++..+.+. ....+-.-|..+.+++++.+.++.. ..++|.+
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~-v~~~~~~~~~~~~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 81 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGAN-VVNADIHGGDGQH-----ENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGL 81 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCcccccc-----CceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999999 99999999999999998 7778777654321 1112222344456677777666543 2479999
Q ss_pred EEcccch
Q psy1413 394 IDCSGIE 400 (408)
Q Consensus 394 ~d~~g~~ 400 (408)
|++.|..
T Consensus 82 i~~Ag~~ 88 (266)
T PRK06171 82 VNNAGIN 88 (266)
T ss_pred EECCccc
Confidence 9999853
No 445
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=96.89 E-value=0.0072 Score=54.91 Aligned_cols=79 Identities=22% Similarity=0.195 Sum_probs=56.0
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT 393 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i 393 (408)
.++++||+|+ |++|..+++.+...|++ |++++++. ....+....+-..|..+.+++.+.+.++.. ..++|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~-v~~~~~~~-----~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAK-VIGFDQAF-----LTQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEecch-----hhhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4578999999 99999999999999997 88888765 222233223333444556777777666543 2468999
Q ss_pred EEcccch
Q psy1413 394 IDCSGIE 400 (408)
Q Consensus 394 ~d~~g~~ 400 (408)
|++.|..
T Consensus 81 i~~ag~~ 87 (252)
T PRK08220 81 VNAAGIL 87 (252)
T ss_pred EECCCcC
Confidence 9998864
No 446
>PRK06123 short chain dehydrogenase; Provisional
Probab=96.89 E-value=0.008 Score=54.44 Aligned_cols=83 Identities=19% Similarity=0.198 Sum_probs=56.7
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
++++||+|+ |++|..+++.+...|++ +++.. +++++.+. ++..+....+...|..+.+++.+.+.++.. ...
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~-vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 80 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYA-VCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGR 80 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCe-EEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCC
Confidence 468999999 99999999999999987 66554 44444332 333454443334444556777777766543 247
Q ss_pred CceEEEcccch
Q psy1413 390 PDKTIDCSGIE 400 (408)
Q Consensus 390 ~d~i~d~~g~~ 400 (408)
+|.+|++.|..
T Consensus 81 id~li~~ag~~ 91 (248)
T PRK06123 81 LDALVNNAGIL 91 (248)
T ss_pred CCEEEECCCCC
Confidence 89999999864
No 447
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.89 E-value=0.0066 Score=55.55 Aligned_cols=84 Identities=21% Similarity=0.249 Sum_probs=58.6
Q ss_pred CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecCh--hhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDILE--HKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~--~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
.+++++|+|+ +++|..+++.+...|++ |++++|+. +..+.+ ++++........|..+.+++++.+.++.. ..
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~-v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g 84 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAE-VVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVD 84 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCE-EEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 3578999985 79999999999999997 88887653 333333 44443322333455566777777776643 25
Q ss_pred CCceEEEcccch
Q psy1413 389 QPDKTIDCSGIE 400 (408)
Q Consensus 389 ~~d~i~d~~g~~ 400 (408)
++|++++++|..
T Consensus 85 ~iD~li~nAG~~ 96 (256)
T PRK07889 85 GLDGVVHSIGFA 96 (256)
T ss_pred CCcEEEEccccc
Confidence 799999999864
No 448
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=96.89 E-value=0.0073 Score=63.23 Aligned_cols=84 Identities=24% Similarity=0.269 Sum_probs=60.1
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-H----cCCC-eEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-E----MGAD-ATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~----~ga~-~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ |++|..+++.+...|++ |++++++.++.+.+. + .+.. .....-|..+.+++.+.+.++.. .
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~-Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~ 491 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAH-VVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAY 491 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 4689999999 99999999999999996 888999877665432 2 2322 22223444556777777766543 3
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
.++|++|+++|..
T Consensus 492 g~iDilV~nAG~~ 504 (676)
T TIGR02632 492 GGVDIVVNNAGIA 504 (676)
T ss_pred CCCcEEEECCCCC
Confidence 4799999999853
No 449
>PRK12827 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0088 Score=54.08 Aligned_cols=84 Identities=23% Similarity=0.272 Sum_probs=56.7
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec----ChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDI----LEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ- 386 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~----~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~- 386 (408)
+.+++|+|+ |++|+.+++.+...|++ ++++++ +.++.+. ....+....+...|..+.+++++.+.++..
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 84 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGAD-VIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEE 84 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCe-EEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHH
Confidence 568999999 99999999999999998 666544 2333332 223344433444455556777777766543
Q ss_pred CCCCceEEEcccchh
Q psy1413 387 GEQPDKTIDCSGIES 401 (408)
Q Consensus 387 ~~~~d~i~d~~g~~~ 401 (408)
..++|.+|+++|...
T Consensus 85 ~~~~d~vi~~ag~~~ 99 (249)
T PRK12827 85 FGRLDILVNNAGIAT 99 (249)
T ss_pred hCCCCEEEECCCCCC
Confidence 247999999998643
No 450
>KOG2017|consensus
Probab=96.88 E-value=0.0027 Score=58.60 Aligned_cols=81 Identities=26% Similarity=0.277 Sum_probs=54.5
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC-------------------hhh----HHHHHHcCCC-eEEecCCC
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL-------------------EHK----LKTAKEMGAD-ATVLIDRN 371 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~-------------------~~~----~~~~~~~ga~-~~i~~~~~ 371 (408)
.++.|||+|+||+|.-++|++.+.|+.++=+++-+ ..| ...++.+..+ ++..+...
T Consensus 65 k~s~VLVVGaGGLGcPa~~YLaaaGvG~lGiVD~DvVe~sNlhRQVlh~ea~vg~~Ka~sA~~~lr~lNs~v~v~~y~~~ 144 (427)
T KOG2017|consen 65 KNSSVLVVGAGGLGCPAAQYLAAAGVGRLGIVDYDVVELSNLHRQVLHTEARVGMHKAESAAAFLRRLNSHVEVQTYNEF 144 (427)
T ss_pred CCccEEEEccCCCCCHHHHHHHHcCCCeecccccceeehhhHHHHHhhhhhhhhhHHHHHHHHHHHhcCCCceeeechhh
Confidence 34679999999999999999999999987666532 111 2233444433 33334444
Q ss_pred CChHHHHHHHHHHhcCCCCceEEEcccchhh
Q psy1413 372 HSLEEISTHIIELLQGEQPDKTIDCSGIEST 402 (408)
Q Consensus 372 ~~~~~~~~~~~~~~~~~~~d~i~d~~g~~~~ 402 (408)
.+.+++.+.+ +++|+|+||+-+..+
T Consensus 145 L~~sNa~~Ii------~~YdvVlDCTDN~~T 169 (427)
T KOG2017|consen 145 LSSSNAFDII------KQYDVVLDCTDNVPT 169 (427)
T ss_pred ccchhHHHHh------hccceEEEcCCCccc
Confidence 4445555444 579999999987765
No 451
>PRK08219 short chain dehydrogenase; Provisional
Probab=96.88 E-value=0.0071 Score=53.89 Aligned_cols=78 Identities=19% Similarity=0.178 Sum_probs=53.0
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~ 396 (408)
.++||+|+ |.+|..+++.+... . +|++++|+.++.+.+.+......+..-|..+.+++.+.+... .++|.+|++
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~-~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~---~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-H-TLLLGGRPAERLDELAAELPGATPFPVDLTDPEAIAAAVEQL---GRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-C-CEEEEeCCHHHHHHHHHHhccceEEecCCCCHHHHHHHHHhc---CCCCEEEEC
Confidence 57999999 99999999988877 5 499999988776655432112222233434455555555432 279999999
Q ss_pred ccch
Q psy1413 397 SGIE 400 (408)
Q Consensus 397 ~g~~ 400 (408)
+|..
T Consensus 79 ag~~ 82 (227)
T PRK08219 79 AGVA 82 (227)
T ss_pred CCcC
Confidence 9864
No 452
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=96.87 E-value=0.0087 Score=54.26 Aligned_cols=86 Identities=21% Similarity=0.256 Sum_probs=57.6
Q ss_pred cCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCe--EEecCC-CCChHHHHHHHHHHh
Q psy1413 314 VTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADA--TVLIDR-NHSLEEISTHIIELL 385 (408)
Q Consensus 314 ~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~--~i~~~~-~~~~~~~~~~~~~~~ 385 (408)
..++.+++|+|+ |++|..+++.+...|++ |++++|+.++.+.+ ++.+... ++..+- ..+.+++.+.+..+.
T Consensus 9 ~~~~k~vlItG~~g~iG~~la~~l~~~G~~-Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 9 LLKDRIILVTGAGDGIGREAALTYARHGAT-VILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCCc-EEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 457889999999 99999999999999996 88899987664332 3333221 221111 113456666555553
Q ss_pred c-CCCCceEEEcccch
Q psy1413 386 Q-GEQPDKTIDCSGIE 400 (408)
Q Consensus 386 ~-~~~~d~i~d~~g~~ 400 (408)
. ..++|.+|.++|..
T Consensus 88 ~~~~~id~vi~~Ag~~ 103 (247)
T PRK08945 88 EQFGRLDGVLHNAGLL 103 (247)
T ss_pred HHhCCCCEEEECCccc
Confidence 3 24799999998753
No 453
>PRK09135 pteridine reductase; Provisional
Probab=96.87 E-value=0.0099 Score=53.76 Aligned_cols=83 Identities=17% Similarity=0.128 Sum_probs=55.7
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHHHH----HHc-CCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLKTA----KEM-GADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~----~~~-ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.+.++||+|+ |++|..+++.+...|++ |++++|+. ++.+.+ .+. +....+..-|..+.+++.+.++++.. .
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 83 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYR-VAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAF 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCE-EEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 4578999999 99999999999999997 77777753 333332 222 22233333444556666666665422 2
Q ss_pred CCCceEEEcccc
Q psy1413 388 EQPDKTIDCSGI 399 (408)
Q Consensus 388 ~~~d~i~d~~g~ 399 (408)
.++|.+|+++|.
T Consensus 84 ~~~d~vi~~ag~ 95 (249)
T PRK09135 84 GRLDALVNNASS 95 (249)
T ss_pred CCCCEEEECCCC
Confidence 468999999985
No 454
>PRK12747 short chain dehydrogenase; Provisional
Probab=96.84 E-value=0.011 Score=53.84 Aligned_cols=83 Identities=24% Similarity=0.199 Sum_probs=53.0
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEe-cChhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc---
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITD-ILEHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ--- 386 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~-~~~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~--- 386 (408)
.+.++||+|+ |++|..+++.+...|++ |++.. ++.++.+. +++.+........|..+.+++.+.+.++..
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 81 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGAL-VAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQ 81 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCe-EEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhh
Confidence 3678999999 99999999999999998 66553 44444432 223343333222333344555555544331
Q ss_pred ----CCCCceEEEcccc
Q psy1413 387 ----GEQPDKTIDCSGI 399 (408)
Q Consensus 387 ----~~~~d~i~d~~g~ 399 (408)
..++|++++++|.
T Consensus 82 ~~~g~~~id~lv~~Ag~ 98 (252)
T PRK12747 82 NRTGSTKFDILINNAGI 98 (252)
T ss_pred hhcCCCCCCEEEECCCc
Confidence 2379999999985
No 455
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=96.82 E-value=0.012 Score=49.87 Aligned_cols=82 Identities=20% Similarity=0.230 Sum_probs=56.3
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhH-------HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CC
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKL-------KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GE 388 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~-------~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~ 388 (408)
.+++|+|+ |++|..+++.+...|...|++++|+..+. +.+++.+....+-..|..+.+++++.+.+... ..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 80 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLAERGARHLVLLSRSGPDAPGAAELLAELEALGAEVTVVACDVADRAALAAALAAIPARLG 80 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHHHhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 36889999 99999999999999987788887765432 23334454433333444456677776666533 34
Q ss_pred CCceEEEcccc
Q psy1413 389 QPDKTIDCSGI 399 (408)
Q Consensus 389 ~~d~i~d~~g~ 399 (408)
.+|.++++.|.
T Consensus 81 ~id~li~~ag~ 91 (180)
T smart00822 81 PLRGVIHAAGV 91 (180)
T ss_pred CeeEEEEcccc
Confidence 68999999984
No 456
>PRK12744 short chain dehydrogenase; Provisional
Probab=96.81 E-value=0.01 Score=54.25 Aligned_cols=82 Identities=22% Similarity=0.237 Sum_probs=55.3
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecC----hhhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDIL----EHKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ- 386 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~----~~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~- 386 (408)
+.++||+|+ |++|..+++.+...|++ ++++.++ .++.+ .++..+....+-.-|..+.+++++.+.++..
T Consensus 8 ~k~vlItGa~~gIG~~~a~~l~~~G~~-vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 8 GKVVLIAGGAKNLGGLIARDLAAQGAK-AVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CcEEEEECCCchHHHHHHHHHHHCCCc-EEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 578999999 99999999999999998 4444332 22222 2233454433333445566777777777643
Q ss_pred CCCCceEEEcccc
Q psy1413 387 GEQPDKTIDCSGI 399 (408)
Q Consensus 387 ~~~~d~i~d~~g~ 399 (408)
.+++|++|++.|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 2479999999986
No 457
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.80 E-value=0.012 Score=53.50 Aligned_cols=82 Identities=20% Similarity=0.243 Sum_probs=53.6
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhH----HHHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKL----KTAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQ 389 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~----~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~ 389 (408)
+.++||+|+ |++|..+++.+...|++ +++..+ +..+. +.+++.+....+...|..+.+++.+.+.++.. ..+
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~-v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSL-VVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGV 84 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCE-EEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCC
Confidence 578999999 99999999999999998 555443 33332 22334444433333344445666665555432 247
Q ss_pred CceEEEcccc
Q psy1413 390 PDKTIDCSGI 399 (408)
Q Consensus 390 ~d~i~d~~g~ 399 (408)
+|.+|++.|.
T Consensus 85 ~d~vi~~ag~ 94 (252)
T PRK06077 85 ADILVNNAGL 94 (252)
T ss_pred CCEEEECCCC
Confidence 9999999985
No 458
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.79 E-value=0.007 Score=55.54 Aligned_cols=83 Identities=23% Similarity=0.263 Sum_probs=57.7
Q ss_pred CCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecC---hhhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-C
Q psy1413 316 LGSKVLITGA---GPIGLVTLLTARALGASRVVITDIL---EHKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ-G 387 (408)
Q Consensus 316 ~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~---~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~ 387 (408)
.++++||+|+ +++|+.+++.+...|++ |+++++. .++++.+ ++++.... ..-|..+.+++++.+..+.. .
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~Dv~d~~~v~~~~~~~~~~~ 82 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAE-LAFTYVGDRFKDRITEFAAEFGSDLV-FPCDVASDEQIDALFASLGQHW 82 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCe-EEEEccchHHHHHHHHHHHhcCCcce-eeccCCCHHHHHHHHHHHHHHh
Confidence 4678999993 69999999999999998 7766543 3444433 34453322 23455566778877777654 2
Q ss_pred CCCceEEEcccch
Q psy1413 388 EQPDKTIDCSGIE 400 (408)
Q Consensus 388 ~~~d~i~d~~g~~ 400 (408)
+++|+++++.|..
T Consensus 83 g~iD~lvnnAG~~ 95 (260)
T PRK06997 83 DGLDGLVHSIGFA 95 (260)
T ss_pred CCCcEEEEccccC
Confidence 5799999999864
No 459
>PRK07201 short chain dehydrogenase; Provisional
Probab=96.78 E-value=0.0079 Score=63.01 Aligned_cols=82 Identities=23% Similarity=0.300 Sum_probs=61.2
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH----HHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA----KEMGADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~----~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
+.+++|+|+ |++|..+++.+...|++ |++++|++++++.+ ++.+....+-..|..+.+++++.+.++.. -.++
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 449 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGAT-VFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHV 449 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCC
Confidence 578999999 99999999999999996 99999988776544 22344443334455667777777776543 2369
Q ss_pred ceEEEcccc
Q psy1413 391 DKTIDCSGI 399 (408)
Q Consensus 391 d~i~d~~g~ 399 (408)
|++|++.|.
T Consensus 450 d~li~~Ag~ 458 (657)
T PRK07201 450 DYLVNNAGR 458 (657)
T ss_pred CEEEECCCC
Confidence 999999985
No 460
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=96.78 E-value=0.011 Score=54.66 Aligned_cols=84 Identities=20% Similarity=0.162 Sum_probs=59.7
Q ss_pred CCCCEEEEEec---chhHHHHHHHHHHhCCCeEEEEecCh---hhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413 315 TLGSKVLITGA---GPIGLVTLLTARALGASRVVITDILE---HKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQ- 386 (408)
Q Consensus 315 ~~~~~~lv~G~---G~~G~~~~~~~~~~Ga~~vv~~~~~~---~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~- 386 (408)
-.++++||+|+ +++|+.+++.+...|++ |+++.|++ ++.+.+ ++++.... ...|..+.+++++.+.++..
T Consensus 8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~-V~l~~r~~~~~~~~~~l~~~~~~~~~-~~~Dl~~~~~v~~~~~~~~~~ 85 (272)
T PRK08159 8 MAGKRGLILGVANNRSIAWGIAKACRAAGAE-LAFTYQGDALKKRVEPLAAELGAFVA-GHCDVTDEASIDAVFETLEKK 85 (272)
T ss_pred ccCCEEEEECCCCCCcHHHHHHHHHHHCCCE-EEEEcCchHHHHHHHHHHHhcCCceE-EecCCCCHHHHHHHHHHHHHh
Confidence 35678999987 58999999999999997 77777763 333333 34553222 33455667888888877654
Q ss_pred CCCCceEEEcccch
Q psy1413 387 GEQPDKTIDCSGIE 400 (408)
Q Consensus 387 ~~~~d~i~d~~g~~ 400 (408)
..++|+++++.|..
T Consensus 86 ~g~iD~lv~nAG~~ 99 (272)
T PRK08159 86 WGKLDFVVHAIGFS 99 (272)
T ss_pred cCCCcEEEECCccc
Confidence 34799999999864
No 461
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=96.77 E-value=0.0078 Score=55.98 Aligned_cols=69 Identities=26% Similarity=0.339 Sum_probs=50.5
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEE
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTID 395 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d 395 (408)
.+++++|+|.|.+|+.+++.++.+|++ |.+.+|+.++.+.+.++|...+ .. +++.+.+ +..|+||+
T Consensus 150 ~gk~v~IiG~G~iG~avA~~L~~~G~~-V~v~~R~~~~~~~~~~~g~~~~-~~------~~l~~~l------~~aDiVin 215 (287)
T TIGR02853 150 HGSNVMVLGFGRTGMTIARTFSALGAR-VFVGARSSADLARITEMGLIPF-PL------NKLEEKV------AEIDIVIN 215 (287)
T ss_pred CCCEEEEEcChHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHCCCeee-cH------HHHHHHh------ccCCEEEE
Confidence 467999999999999999999999985 9999999887776666664322 11 2332222 35788888
Q ss_pred ccc
Q psy1413 396 CSG 398 (408)
Q Consensus 396 ~~g 398 (408)
+++
T Consensus 216 t~P 218 (287)
T TIGR02853 216 TIP 218 (287)
T ss_pred CCC
Confidence 775
No 462
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.75 E-value=0.013 Score=53.49 Aligned_cols=82 Identities=15% Similarity=0.107 Sum_probs=56.1
Q ss_pred CCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecC-----------hh-hH---HHHHHcCCCeEEecCCCCChHHHH
Q psy1413 317 GSKVLITGA-G--PIGLVTLLTARALGASRVVITDIL-----------EH-KL---KTAKEMGADATVLIDRNHSLEEIS 378 (408)
Q Consensus 317 ~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~-----------~~-~~---~~~~~~ga~~~i~~~~~~~~~~~~ 378 (408)
++++||+|+ | ++|..+++.+...|++ |++++|+ +. .. +.+++.+........|..+.++++
T Consensus 5 ~k~vlItGas~~~giG~~la~~l~~~G~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~ 83 (256)
T PRK12748 5 KKIALVTGASRLNGIGAAVCRRLAAKGID-IFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCEHMEIDLSQPYAPN 83 (256)
T ss_pred CcEEEEeCCCCCCCHHHHHHHHHHHcCCc-EEEEcCCccccccccccchhhHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 478999998 4 7999999999999996 8888776 21 11 122334544333344555667777
Q ss_pred HHHHHHhc-CCCCceEEEcccc
Q psy1413 379 THIIELLQ-GEQPDKTIDCSGI 399 (408)
Q Consensus 379 ~~~~~~~~-~~~~d~i~d~~g~ 399 (408)
+.+.++.. ..++|++|++.|.
T Consensus 84 ~~~~~~~~~~g~id~vi~~ag~ 105 (256)
T PRK12748 84 RVFYAVSERLGDPSILINNAAY 105 (256)
T ss_pred HHHHHHHHhCCCCCEEEECCCc
Confidence 77766643 2479999999885
No 463
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=96.74 E-value=0.013 Score=53.52 Aligned_cols=84 Identities=11% Similarity=0.084 Sum_probs=57.4
Q ss_pred CCCEEEEEec-c--hhHHHHHHHHHHhCCCeEEEEecC-----------hhhH----HHHHHcCCCeEEecCCCCChHHH
Q psy1413 316 LGSKVLITGA-G--PIGLVTLLTARALGASRVVITDIL-----------EHKL----KTAKEMGADATVLIDRNHSLEEI 377 (408)
Q Consensus 316 ~~~~~lv~G~-G--~~G~~~~~~~~~~Ga~~vv~~~~~-----------~~~~----~~~~~~ga~~~i~~~~~~~~~~~ 377 (408)
.++++||+|+ + ++|..+++.+...|++ |+++.++ .+++ +.+++.|.......-|..+.+++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~-vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~i 83 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGAD-IFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVSSMELDLTQNDAP 83 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCe-EEEEecccccccccccccHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 4678999998 4 8999999999999998 6665321 1111 22344565544434455667788
Q ss_pred HHHHHHHhc-CCCCceEEEcccch
Q psy1413 378 STHIIELLQ-GEQPDKTIDCSGIE 400 (408)
Q Consensus 378 ~~~~~~~~~-~~~~d~i~d~~g~~ 400 (408)
.+.+.++.. ...+|++|+++|..
T Consensus 84 ~~~~~~~~~~~g~id~li~~ag~~ 107 (256)
T PRK12859 84 KELLNKVTEQLGYPHILVNNAAYS 107 (256)
T ss_pred HHHHHHHHHHcCCCcEEEECCCCC
Confidence 888777653 24689999999853
No 464
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=96.70 E-value=0.01 Score=53.34 Aligned_cols=80 Identities=25% Similarity=0.262 Sum_probs=54.4
Q ss_pred EEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHH----HHHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 320 VLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLK----TAKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 320 ~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~----~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
+||+|+ |++|..+++.+...|++ |++++|+. ++.+ .+++.|....+-..|..+.+++.+.+.++.. ..++|.
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 79 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAK-VIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDI 79 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCE-EEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 478898 99999999999999997 77777764 3322 2344454433344455556666666655432 247999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
++++.|..
T Consensus 80 vi~~ag~~ 87 (239)
T TIGR01830 80 LVNNAGIT 87 (239)
T ss_pred EEECCCCC
Confidence 99999853
No 465
>PRK07041 short chain dehydrogenase; Provisional
Probab=96.66 E-value=0.011 Score=52.99 Aligned_cols=75 Identities=21% Similarity=0.206 Sum_probs=54.1
Q ss_pred EEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-Hc--CCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413 321 LITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK-EM--GADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396 (408)
Q Consensus 321 lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~--ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~ 396 (408)
||+|+ |++|..+++.+...|++ |++++|+.++.+.+. ++ +....+...|..+.+++++.+.++ +++|.+|++
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~---~~id~li~~ 76 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGAR-VTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA---GPFDHVVIT 76 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc---CCCCEEEEC
Confidence 58898 99999999999999997 888999877665432 22 333323334545567777776653 469999999
Q ss_pred ccc
Q psy1413 397 SGI 399 (408)
Q Consensus 397 ~g~ 399 (408)
.|.
T Consensus 77 ag~ 79 (230)
T PRK07041 77 AAD 79 (230)
T ss_pred CCC
Confidence 885
No 466
>PLN02494 adenosylhomocysteinase
Probab=96.65 E-value=0.0068 Score=59.46 Aligned_cols=72 Identities=22% Similarity=0.269 Sum_probs=55.6
Q ss_pred CCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413 315 TLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394 (408)
Q Consensus 315 ~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 394 (408)
-.+++++|+|.|.+|+.+++.++.+|++ |+++++++.+...+...|...+ + +.+.+ +..|++|
T Consensus 252 LaGKtVvViGyG~IGr~vA~~aka~Ga~-VIV~e~dp~r~~eA~~~G~~vv-~---------leEal------~~ADVVI 314 (477)
T PLN02494 252 IAGKVAVICGYGDVGKGCAAAMKAAGAR-VIVTEIDPICALQALMEGYQVL-T---------LEDVV------SEADIFV 314 (477)
T ss_pred cCCCEEEEECCCHHHHHHHHHHHHCCCE-EEEEeCCchhhHHHHhcCCeec-c---------HHHHH------hhCCEEE
Confidence 5689999999999999999999999996 8989888887766766776522 1 22222 2479999
Q ss_pred Ecccchhhh
Q psy1413 395 DCSGIESTI 403 (408)
Q Consensus 395 d~~g~~~~~ 403 (408)
+++|..+.+
T Consensus 315 ~tTGt~~vI 323 (477)
T PLN02494 315 TTTGNKDII 323 (477)
T ss_pred ECCCCccch
Confidence 999877654
No 467
>PRK12367 short chain dehydrogenase; Provisional
Probab=96.64 E-value=0.01 Score=53.94 Aligned_cols=74 Identities=26% Similarity=0.259 Sum_probs=48.3
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 394 (408)
+.+++|+|+ |++|..+++.+...|++ |++++|+. ++.+.... +....+. .|..+.+++.+ .. +++|++|
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~~-Vi~~~r~~~~~~~~~~~-~~~~~~~-~D~~~~~~~~~----~~--~~iDilV 84 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGAK-VIGLTHSKINNSESNDE-SPNEWIK-WECGKEESLDK----QL--ASLDVLI 84 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCE-EEEEECCchhhhhhhcc-CCCeEEE-eeCCCHHHHHH----hc--CCCCEEE
Confidence 578999999 99999999999999997 88888876 33222221 2222222 22223344332 22 3699999
Q ss_pred Ecccc
Q psy1413 395 DCSGI 399 (408)
Q Consensus 395 d~~g~ 399 (408)
+++|.
T Consensus 85 nnAG~ 89 (245)
T PRK12367 85 LNHGI 89 (245)
T ss_pred ECCcc
Confidence 99986
No 468
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=96.60 E-value=0.0097 Score=55.50 Aligned_cols=77 Identities=17% Similarity=0.281 Sum_probs=49.0
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecCh---hhHHHH-HHcC---CCeEEecCCCCChHHHHHHHHHHhcCC
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILE---HKLKTA-KEMG---ADATVLIDRNHSLEEISTHIIELLQGE 388 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~---~~~~~~-~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~~~ 388 (408)
.+.+++|+|+||.|++++..+...|+++|.+++|+. ++.+.+ +++. ....+...+..+.+++.+.+ .
T Consensus 125 ~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~------~ 198 (289)
T PRK12548 125 KGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEI------A 198 (289)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhh------c
Confidence 457899999999999999999999999899999985 454433 3332 12122211211112222222 2
Q ss_pred CCceEEEccc
Q psy1413 389 QPDKTIDCSG 398 (408)
Q Consensus 389 ~~d~i~d~~g 398 (408)
.+|+++||+.
T Consensus 199 ~~DilINaTp 208 (289)
T PRK12548 199 SSDILVNATL 208 (289)
T ss_pred cCCEEEEeCC
Confidence 4699999885
No 469
>KOG1200|consensus
Probab=96.59 E-value=0.017 Score=49.23 Aligned_cols=83 Identities=20% Similarity=0.320 Sum_probs=58.4
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hHHHHHHcCC--CeEEecCCCCChHHHHHHHHHHhc-CCCCc
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KLKTAKEMGA--DATVLIDRNHSLEEISTHIIELLQ-GEQPD 391 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~~~~~~~ga--~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d 391 (408)
....+|+|+ .++|++++|.+...|+| +++.+.+.. ..+.++.+|. ++.--..|.+..++....+.+... ...++
T Consensus 14 sk~~~vtGg~sGIGrAia~~la~~Gar-v~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~ps 92 (256)
T KOG1200|consen 14 SKVAAVTGGSSGIGRAIAQLLAKKGAR-VAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPS 92 (256)
T ss_pred cceeEEecCCchHHHHHHHHHHhcCcE-EEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCc
Confidence 345778888 99999999999999999 777776544 4455677775 444333444455666665666543 34789
Q ss_pred eEEEcccch
Q psy1413 392 KTIDCSGIE 400 (408)
Q Consensus 392 ~i~d~~g~~ 400 (408)
+++||.|..
T Consensus 93 vlVncAGIt 101 (256)
T KOG1200|consen 93 VLVNCAGIT 101 (256)
T ss_pred EEEEcCccc
Confidence 999999964
No 470
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=96.57 E-value=0.02 Score=54.88 Aligned_cols=84 Identities=24% Similarity=0.082 Sum_probs=57.8
Q ss_pred CCCCEEEEEec-chhHHH--HHHHHHHhCCCeEEEEecCh--hh--------------HHHHHHcCCCeEEecCCCCChH
Q psy1413 315 TLGSKVLITGA-GPIGLV--TLLTARALGASRVVITDILE--HK--------------LKTAKEMGADATVLIDRNHSLE 375 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~--~~~~~~~~Ga~~vv~~~~~~--~~--------------~~~~~~~ga~~~i~~~~~~~~~ 375 (408)
.-++++||+|+ +++|++ +++.+ ..|++ ++++++.. .+ .+.+++.|.....-..|..+.+
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~-Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGAD-TLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCe-EEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHH
Confidence 44579999999 999999 67777 88998 66665321 11 2344556755443345556667
Q ss_pred HHHHHHHHHhc-CCCCceEEEcccch
Q psy1413 376 EISTHIIELLQ-GEQPDKTIDCSGIE 400 (408)
Q Consensus 376 ~~~~~~~~~~~-~~~~d~i~d~~g~~ 400 (408)
+..+.+.++.. .+++|+++++.+.+
T Consensus 117 ~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhcCCCCEEEECCccC
Confidence 77777777654 35799999999866
No 471
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=96.56 E-value=0.019 Score=51.78 Aligned_cols=82 Identities=20% Similarity=0.127 Sum_probs=55.5
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChh-hH-HHHHHc---CCCeEEecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILEH-KL-KTAKEM---GADATVLIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~-~~-~~~~~~---ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
+++||+|+ |++|+.+++.+...|++ |++++|+.. .. +..++. +....+...|..+.+++.+.+.++.. ..++
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~-vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 81 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYR-VIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPV 81 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCE-EEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 47899999 99999999999999986 888887743 12 222222 22333334455556677776666543 3469
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|.+|+++|..
T Consensus 82 d~vi~~ag~~ 91 (245)
T PRK12824 82 DILVNNAGIT 91 (245)
T ss_pred CEEEECCCCC
Confidence 9999999854
No 472
>KOG1207|consensus
Probab=96.55 E-value=0.0087 Score=50.02 Aligned_cols=82 Identities=23% Similarity=0.223 Sum_probs=61.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 394 (408)
.+..++++|+ -|+|+..++-+...||+ ||+++|++..+..+-+.-...++.-.- +.++++...+.+..-..+|..+
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~-ViAvaR~~a~L~sLV~e~p~~I~Pi~~--Dls~wea~~~~l~~v~pidgLV 82 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQ-VIAVARNEANLLSLVKETPSLIIPIVG--DLSAWEALFKLLVPVFPIDGLV 82 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCE-EEEEecCHHHHHHHHhhCCcceeeeEe--cccHHHHHHHhhcccCchhhhh
Confidence 4567888998 89999999999999998 999999999988775544444433322 2356666666665555789999
Q ss_pred Ecccch
Q psy1413 395 DCSGIE 400 (408)
Q Consensus 395 d~~g~~ 400 (408)
|..|..
T Consensus 83 NNAgvA 88 (245)
T KOG1207|consen 83 NNAGVA 88 (245)
T ss_pred ccchhh
Confidence 988865
No 473
>PRK07069 short chain dehydrogenase; Validated
Probab=96.55 E-value=0.015 Score=52.73 Aligned_cols=80 Identities=20% Similarity=0.263 Sum_probs=54.2
Q ss_pred EEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHHHHH-Hc----CCCeEE-ecCCCCChHHHHHHHHHHhc-CCCC
Q psy1413 320 VLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLKTAK-EM----GADATV-LIDRNHSLEEISTHIIELLQ-GEQP 390 (408)
Q Consensus 320 ~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~~~-~~----ga~~~i-~~~~~~~~~~~~~~~~~~~~-~~~~ 390 (408)
++|+|+ |++|..+++.+...|++ |++++++ .++++.+. ++ +...+. -..|..+.+++.+.+.++.. -.++
T Consensus 2 ilVtG~~~~iG~~~a~~l~~~G~~-v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 2 AFITGAAGGLGRAIARRMAEQGAK-VFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred EEEECCCChHHHHHHHHHHHCCCE-EEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 789998 99999999999999997 8888887 55554432 22 222221 12244456777776666533 3469
Q ss_pred ceEEEcccch
Q psy1413 391 DKTIDCSGIE 400 (408)
Q Consensus 391 d~i~d~~g~~ 400 (408)
|++|+++|..
T Consensus 81 d~vi~~ag~~ 90 (251)
T PRK07069 81 SVLVNNAGVG 90 (251)
T ss_pred cEEEECCCcC
Confidence 9999999854
No 474
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=96.53 E-value=0.017 Score=56.39 Aligned_cols=77 Identities=26% Similarity=0.249 Sum_probs=50.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCC-eEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGAD-ATVLIDRNHSLEEISTHIIELLQGEQPDK 392 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~-~~i~~~~~~~~~~~~~~~~~~~~~~~~d~ 392 (408)
.+++++|+|+ |++|..+++.+...|++ |++++|++++++.. .+.+.. ..+. -|..+.+++.+. . +++|+
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~-Vi~l~r~~~~l~~~~~~~~~~v~~v~-~Dvsd~~~v~~~----l--~~IDi 248 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAK-VVALTSNSDKITLEINGEDLPVKTLH-WQVGQEAALAEL----L--EKVDI 248 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCE-EEEEeCCHHHHHHHHhhcCCCeEEEE-eeCCCHHHHHHH----h--CCCCE
Confidence 3678999999 99999999999999997 88888887665432 222211 1222 222233433332 2 36999
Q ss_pred EEEcccch
Q psy1413 393 TIDCSGIE 400 (408)
Q Consensus 393 i~d~~g~~ 400 (408)
+|++.|..
T Consensus 249 LInnAGi~ 256 (406)
T PRK07424 249 LIINHGIN 256 (406)
T ss_pred EEECCCcC
Confidence 99998854
No 475
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=96.49 E-value=0.027 Score=49.56 Aligned_cols=35 Identities=40% Similarity=0.485 Sum_probs=31.6
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~ 350 (408)
.+.+++|+|.|++|..+++.+...|..++.+++.+
T Consensus 20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence 34679999999999999999999999999999865
No 476
>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type. This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.
Probab=96.48 E-value=0.01 Score=55.06 Aligned_cols=77 Identities=12% Similarity=0.141 Sum_probs=52.7
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcCCCe-EEecCCCCChHHHHHHHHHHhcCCCCceE
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMGADA-TVLIDRNHSLEEISTHIIELLQGEQPDKT 393 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~ga~~-~i~~~~~~~~~~~~~~~~~~~~~~~~d~i 393 (408)
.+.+++|+|+|+.+++++..+..+|+++|.++.|+.+|.+.+ ++++... +.... ..+++ .+. -..+|+|
T Consensus 124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~---~~~~~----~~~--~~~~DiV 194 (282)
T TIGR01809 124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE---GDSGG----LAI--EKAAEVL 194 (282)
T ss_pred CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc---chhhh----hhc--ccCCCEE
Confidence 467899999999999999999999999999999998887665 4343211 11110 00111 111 1368999
Q ss_pred EEcccchh
Q psy1413 394 IDCSGIES 401 (408)
Q Consensus 394 ~d~~g~~~ 401 (408)
|+|++...
T Consensus 195 InaTp~g~ 202 (282)
T TIGR01809 195 VSTVPADV 202 (282)
T ss_pred EECCCCCC
Confidence 99987643
No 477
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=96.47 E-value=0.021 Score=52.13 Aligned_cols=80 Identities=19% Similarity=0.160 Sum_probs=52.6
Q ss_pred EEEEEec-chhHHHHHHHHHH----hCCCeEEEEecChhhHHHHH-Hc-----CCCeEEecCCCCChHHHHHHHHHHhcC
Q psy1413 319 KVLITGA-GPIGLVTLLTARA----LGASRVVITDILEHKLKTAK-EM-----GADATVLIDRNHSLEEISTHIIELLQG 387 (408)
Q Consensus 319 ~~lv~G~-G~~G~~~~~~~~~----~Ga~~vv~~~~~~~~~~~~~-~~-----ga~~~i~~~~~~~~~~~~~~~~~~~~~ 387 (408)
++||+|+ +++|..+++.+.. .|++ |++++|+.++++.+. ++ +....+-.-|..+.+++++.+.++...
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~-V~~~~r~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~~~~~v~~~~~~~~~~ 80 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSV-LVLSARNDEALRQLKAEIGAERSGLRVVRVSLDLGAEAGLEQLLKALREL 80 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcE-EEEEEcCHHHHHHHHHHHHhcCCCceEEEEEeccCCHHHHHHHHHHHHhc
Confidence 5789999 9999999987764 6876 888999887765542 22 222222233445567777766665432
Q ss_pred C-----CCceEEEcccc
Q psy1413 388 E-----QPDKTIDCSGI 399 (408)
Q Consensus 388 ~-----~~d~i~d~~g~ 399 (408)
. +.|++|++.|.
T Consensus 81 ~g~~~~~~~~lv~nAG~ 97 (256)
T TIGR01500 81 PRPKGLQRLLLINNAGT 97 (256)
T ss_pred cccCCCceEEEEeCCcc
Confidence 1 23689999885
No 478
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=96.44 E-value=0.019 Score=67.90 Aligned_cols=87 Identities=16% Similarity=0.140 Sum_probs=64.3
Q ss_pred CcCCCCEEEEEec-chhHHHHHHHHHHh-CCCeEEEEecChh--------------------------------------
Q psy1413 313 GVTLGSKVLITGA-GPIGLVTLLTARAL-GASRVVITDILEH-------------------------------------- 352 (408)
Q Consensus 313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~-Ga~~vv~~~~~~~-------------------------------------- 352 (408)
.++++++|||+|| +|+|..+++.+... |++ +++++|+..
T Consensus 1993 ~l~~g~vvLVTGGarGIG~aiA~~LA~~~ga~-viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1993 ALNSDDVFLVTGGAKGVTFECALELAKQCQAH-FILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred ccCCCCEEEEeCCCCHHHHHHHHHHHHhcCCE-EEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 5778899999999 99999999988876 565 999998710
Q ss_pred -------------hHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcccch
Q psy1413 353 -------------KLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCSGIE 400 (408)
Q Consensus 353 -------------~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~g~~ 400 (408)
.++.+++.|....+..-|..+.+++++.+.++....++|.+|++.|..
T Consensus 2072 ~~~~~~~~~ei~~~la~l~~~G~~v~y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~ 2132 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAAFKAAGASAEYASADVTNSVSVAATVQPLNKTLQITGIIHGAGVL 2132 (2582)
T ss_pred cccccchhHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccC
Confidence 012234457665555566677788888888775444799999999964
No 479
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=96.43 E-value=0.023 Score=55.49 Aligned_cols=82 Identities=23% Similarity=0.334 Sum_probs=55.1
Q ss_pred CcCCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHH-------HHHHc-CCCeEEecCCCCChHHHHHHHHH
Q psy1413 313 GVTLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLK-------TAKEM-GADATVLIDRNHSLEEISTHIIE 383 (408)
Q Consensus 313 ~~~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-------~~~~~-ga~~~i~~~~~~~~~~~~~~~~~ 383 (408)
....+.++||+|+ |.+|..+++.+...|.+ |++++|+..+.+ ..+.. ++. ++ .-|..+.+++.+.++.
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~-V~~l~R~~~~~~~~~~~~~~~~~~~~v~-~v-~~Dl~d~~~l~~~~~~ 132 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYN-VVAVAREKSGIRGKNGKEDTKKELPGAE-VV-FGDVTDADSLRKVLFS 132 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCE-EEEEEechhhccccchhhHHhhhcCCce-EE-EeeCCCHHHHHHHHHH
Confidence 3455678999999 99999999999999987 888888765432 11112 222 22 2333345666666654
Q ss_pred HhcCCCCceEEEcccc
Q psy1413 384 LLQGEQPDKTIDCSGI 399 (408)
Q Consensus 384 ~~~~~~~d~i~d~~g~ 399 (408)
. +.++|+||+|.+.
T Consensus 133 ~--~~~~D~Vi~~aa~ 146 (390)
T PLN02657 133 E--GDPVDVVVSCLAS 146 (390)
T ss_pred h--CCCCcEEEECCcc
Confidence 3 2279999999875
No 480
>PRK04148 hypothetical protein; Provisional
Probab=96.41 E-value=0.035 Score=44.97 Aligned_cols=83 Identities=23% Similarity=0.263 Sum_probs=63.9
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeE------------------EecCCCCChHHH
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADAT------------------VLIDRNHSLEEI 377 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~------------------i~~~~~~~~~~~ 377 (408)
.+.+++++|.| .|..+++.++.+|.+ |++++.+++..+.+++.+.+.+ ..-+- +.++
T Consensus 16 ~~~kileIG~G-fG~~vA~~L~~~G~~-ViaIDi~~~aV~~a~~~~~~~v~dDlf~p~~~~y~~a~liysirp---p~el 90 (134)
T PRK04148 16 KNKKIVELGIG-FYFKVAKKLKESGFD-VIVIDINEKAVEKAKKLGLNAFVDDLFNPNLEIYKNAKLIYSIRP---PRDL 90 (134)
T ss_pred cCCEEEEEEec-CCHHHHHHHHHCCCE-EEEEECCHHHHHHHHHhCCeEEECcCCCCCHHHHhcCCEEEEeCC---CHHH
Confidence 45789999999 998888888889987 9999999998887777654333 33222 3577
Q ss_pred HHHHHHHhcCCCCceEEEcccchhhh
Q psy1413 378 STHIIELLQGEQPDKTIDCSGIESTI 403 (408)
Q Consensus 378 ~~~~~~~~~~~~~d~i~d~~g~~~~~ 403 (408)
..-+.++...-++|++|-.-+++.+.
T Consensus 91 ~~~~~~la~~~~~~~~i~~l~~e~~~ 116 (134)
T PRK04148 91 QPFILELAKKINVPLIIKPLSGEEPI 116 (134)
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCCCC
Confidence 77888877677899999888877653
No 481
>PRK12550 shikimate 5-dehydrogenase; Reviewed
Probab=96.38 E-value=0.016 Score=53.31 Aligned_cols=45 Identities=20% Similarity=0.141 Sum_probs=39.0
Q ss_pred cCCCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH
Q psy1413 314 VTLGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK 358 (408)
Q Consensus 314 ~~~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~ 358 (408)
+..+.+++|.|+||.+++++..+...|+.+|.++.|+.+|.+.+.
T Consensus 119 ~~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la 163 (272)
T PRK12550 119 VPPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALA 163 (272)
T ss_pred CCCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHH
Confidence 344568999999999999999999999999999999998877653
No 482
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=96.34 E-value=0.021 Score=52.49 Aligned_cols=81 Identities=16% Similarity=0.104 Sum_probs=49.6
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEec-ChhhHHHH-HHc----CCCeEEecCCCCChHHH----HHHHHHHhc
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDI-LEHKLKTA-KEM----GADATVLIDRNHSLEEI----STHIIELLQ 386 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~-~~~~~~~~-~~~----ga~~~i~~~~~~~~~~~----~~~~~~~~~ 386 (408)
.+++|+|+ +++|+.+++.+...|++ |+++.+ +.++++.+ +++ +....+-.-|..+.+.+ ++.+.....
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~-V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~ 80 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYR-VVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFR 80 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCe-EEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHH
Confidence 47899999 99999999999999998 666654 44444332 222 22222222333344433 333333221
Q ss_pred -CCCCceEEEcccc
Q psy1413 387 -GEQPDKTIDCSGI 399 (408)
Q Consensus 387 -~~~~d~i~d~~g~ 399 (408)
..++|++|+++|.
T Consensus 81 ~~g~iD~lv~nAG~ 94 (267)
T TIGR02685 81 AFGRCDVLVNNASA 94 (267)
T ss_pred ccCCceEEEECCcc
Confidence 2479999999985
No 483
>PLN00015 protochlorophyllide reductase
Probab=96.31 E-value=0.023 Score=53.55 Aligned_cols=79 Identities=25% Similarity=0.236 Sum_probs=55.4
Q ss_pred EEEec-chhHHHHHHHHHHhC-CCeEEEEecChhhHHHH-HHcC---CCeEEecCCCCChHHHHHHHHHHhc-CCCCceE
Q psy1413 321 LITGA-GPIGLVTLLTARALG-ASRVVITDILEHKLKTA-KEMG---ADATVLIDRNHSLEEISTHIIELLQ-GEQPDKT 393 (408)
Q Consensus 321 lv~G~-G~~G~~~~~~~~~~G-a~~vv~~~~~~~~~~~~-~~~g---a~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~i 393 (408)
||+|+ +++|..+++.+...| ++ |++++|+.++.+.+ ++++ ....+-.-|..+.+++++.+.++.. ..++|++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~-V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~l 79 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWH-VVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVL 79 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCE-EEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEE
Confidence 58899 999999999999999 65 88888987776543 3332 2222223344556777777776643 3479999
Q ss_pred EEcccch
Q psy1413 394 IDCSGIE 400 (408)
Q Consensus 394 ~d~~g~~ 400 (408)
|+++|..
T Consensus 80 InnAG~~ 86 (308)
T PLN00015 80 VCNAAVY 86 (308)
T ss_pred EECCCcC
Confidence 9999863
No 484
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=96.30 E-value=0.028 Score=50.58 Aligned_cols=79 Identities=19% Similarity=0.113 Sum_probs=52.9
Q ss_pred EEEEec-chhHHHHHHHHHHhCCCeEEEEecC-hhhHHH----HHHcCCCeEEecCCCCChHHHHHHHHHHhc-CCCCce
Q psy1413 320 VLITGA-GPIGLVTLLTARALGASRVVITDIL-EHKLKT----AKEMGADATVLIDRNHSLEEISTHIIELLQ-GEQPDK 392 (408)
Q Consensus 320 ~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~-~~~~~~----~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~-~~~~d~ 392 (408)
+||+|+ |++|..+++.+...|++ +++++++ .++.+. +++.+....+-.-|..+.+++.+.+.+... ...+|.
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~-v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~ 79 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFE-ICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYG 79 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCE-EEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 588998 99999999999999998 7666654 333332 233444333333444556777777666432 346899
Q ss_pred EEEcccc
Q psy1413 393 TIDCSGI 399 (408)
Q Consensus 393 i~d~~g~ 399 (408)
++++.|.
T Consensus 80 li~~ag~ 86 (239)
T TIGR01831 80 VVLNAGI 86 (239)
T ss_pred EEECCCC
Confidence 9998885
No 485
>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]
Probab=96.30 E-value=0.02 Score=55.30 Aligned_cols=74 Identities=24% Similarity=0.392 Sum_probs=58.6
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHH-HHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLK-TAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~-~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 394 (408)
.+.++||+|+|-+|..+++++...|.+.|++..|+-+|.+ .++++|+..+ .. +++.+.+ ..+|+||
T Consensus 177 ~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~l------~el~~~l------~~~DvVi 243 (414)
T COG0373 177 KDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-AL------EELLEAL------AEADVVI 243 (414)
T ss_pred ccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-cH------HHHHHhh------hhCCEEE
Confidence 6788999999999999999999999999999999988875 4588984433 22 3343333 3589999
Q ss_pred Ecccchhh
Q psy1413 395 DCSGIEST 402 (408)
Q Consensus 395 d~~g~~~~ 402 (408)
-++|.++.
T Consensus 244 ssTsa~~~ 251 (414)
T COG0373 244 SSTSAPHP 251 (414)
T ss_pred EecCCCcc
Confidence 99998765
No 486
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=96.29 E-value=0.014 Score=54.18 Aligned_cols=74 Identities=22% Similarity=0.261 Sum_probs=50.8
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHHH-HcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEE
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTAK-EMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTI 394 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~-~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~ 394 (408)
.+.+++|+|+|+.|.+++..+..+|+.+|.+++|+.++.+.+. +++....+.. + .+. .+. -..+|+||
T Consensus 122 ~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~----~~~----~~~--~~~~DivI 190 (278)
T PRK00258 122 KGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-D----LEL----QEE--LADFDLII 190 (278)
T ss_pred CCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-c----ccc----hhc--cccCCEEE
Confidence 4568999999999999999999999777999999988876653 3432110111 1 001 111 24689999
Q ss_pred Ecccch
Q psy1413 395 DCSGIE 400 (408)
Q Consensus 395 d~~g~~ 400 (408)
+|++..
T Consensus 191 naTp~g 196 (278)
T PRK00258 191 NATSAG 196 (278)
T ss_pred ECCcCC
Confidence 998743
No 487
>PRK12549 shikimate 5-dehydrogenase; Reviewed
Probab=96.29 E-value=0.026 Score=52.41 Aligned_cols=42 Identities=24% Similarity=0.271 Sum_probs=37.4
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecChhhHHHH
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDILEHKLKTA 357 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~ 357 (408)
.+.+++|+|+|+.|.+++..+...|+++|.+++|+.+|.+.+
T Consensus 126 ~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~l 167 (284)
T PRK12549 126 SLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAAL 167 (284)
T ss_pred cCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH
Confidence 347899999999999999999999998899999998887655
No 488
>PRK08223 hypothetical protein; Validated
Probab=96.25 E-value=0.026 Score=52.00 Aligned_cols=35 Identities=37% Similarity=0.532 Sum_probs=31.3
Q ss_pred CCCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413 316 LGSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350 (408)
Q Consensus 316 ~~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~ 350 (408)
...+|+|+|+||+|..+++.+.+.|..++.++|.+
T Consensus 26 ~~s~VlIvG~GGLGs~va~~LA~aGVG~i~lvD~D 60 (287)
T PRK08223 26 RNSRVAIAGLGGVGGIHLLTLARLGIGKFTIADFD 60 (287)
T ss_pred hcCCEEEECCCHHHHHHHHHHHHhCCCeEEEEeCC
Confidence 34779999999999999999999999999998754
No 489
>PRK06924 short chain dehydrogenase; Provisional
Probab=96.22 E-value=0.032 Score=50.58 Aligned_cols=82 Identities=20% Similarity=0.236 Sum_probs=53.2
Q ss_pred CEEEEEec-chhHHHHHHHHHHhCCCeEEEEecCh-hhHHHH-HHcCCCeEEecCCCCChHHHHHHHHHHhcC---CCC-
Q psy1413 318 SKVLITGA-GPIGLVTLLTARALGASRVVITDILE-HKLKTA-KEMGADATVLIDRNHSLEEISTHIIELLQG---EQP- 390 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~-~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~---~~~- 390 (408)
+++||+|+ |++|..+++.+...|++ |++++|++ ++++.+ ++.+....+-..|..+.+++++.+++.... ...
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~ 80 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTH-VISISRTENKELTKLAEQYNSNLTFHSLDLQDVHELETNFNEILSSIQEDNVS 80 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCE-EEEEeCCchHHHHHHHhccCCceEEEEecCCCHHHHHHHHHHHHHhcCcccCC
Confidence 46899999 99999999999999996 88888876 444433 223433322234445567777766665321 122
Q ss_pred -ceEEEcccch
Q psy1413 391 -DKTIDCSGIE 400 (408)
Q Consensus 391 -d~i~d~~g~~ 400 (408)
++++++.|..
T Consensus 81 ~~~~v~~ag~~ 91 (251)
T PRK06924 81 SIHLINNAGMV 91 (251)
T ss_pred ceEEEEcceec
Confidence 2677877753
No 490
>KOG1208|consensus
Probab=96.21 E-value=0.046 Score=51.39 Aligned_cols=86 Identities=27% Similarity=0.271 Sum_probs=60.4
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-c----C-CCeEEecCCCCChHHHHHHHHHHhc-
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-M----G-ADATVLIDRNHSLEEISTHIIELLQ- 386 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~----g-a~~~i~~~~~~~~~~~~~~~~~~~~- 386 (408)
-.+.+++|+|+ .|+|...++-+..+|++ |+...|+.++.+.+++ . . ....+-.-|.++.+.+++...+...
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~-Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~ 111 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAH-VVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK 111 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCE-EEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc
Confidence 34478999999 99999999999999976 8889999876654422 2 2 2222234445556666666665532
Q ss_pred CCCCceEEEcccchh
Q psy1413 387 GEQPDKTIDCSGIES 401 (408)
Q Consensus 387 ~~~~d~i~d~~g~~~ 401 (408)
..+.|+.++++|.-.
T Consensus 112 ~~~ldvLInNAGV~~ 126 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMA 126 (314)
T ss_pred CCCccEEEeCccccc
Confidence 457899999998643
No 491
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=96.21 E-value=0.043 Score=49.63 Aligned_cols=34 Identities=29% Similarity=0.413 Sum_probs=30.8
Q ss_pred CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413 317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350 (408)
Q Consensus 317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~ 350 (408)
+.+++|+|+|++|..+++.+.+.|..++.++|.+
T Consensus 24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D 57 (240)
T TIGR02355 24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFD 57 (240)
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCC
Confidence 3679999999999999999999999999998764
No 492
>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP. Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....
Probab=96.18 E-value=0.032 Score=45.62 Aligned_cols=34 Identities=26% Similarity=0.384 Sum_probs=30.4
Q ss_pred CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413 317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350 (408)
Q Consensus 317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~ 350 (408)
+.+++|.|+|++|..++..+...|.+++.++|..
T Consensus 2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d 35 (135)
T PF00899_consen 2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDD 35 (135)
T ss_dssp T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESS
T ss_pred CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCc
Confidence 4689999999999999999999999999999764
No 493
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=96.18 E-value=0.029 Score=53.87 Aligned_cols=79 Identities=20% Similarity=0.154 Sum_probs=52.5
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHH-HHcC--CCeEEecCCCCChHHHHHHHHHHhcCCCCc
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTA-KEMG--ADATVLIDRNHSLEEISTHIIELLQGEQPD 391 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~-~~~g--a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d 391 (408)
.+.++||+|+ |.+|..+++.+...|.+ |++++|+....... +.++ ....+...|..+.+++.+.+++ .++|
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~----~~~d 77 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAE-VYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAE----FKPE 77 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCE-EEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhh----cCCC
Confidence 3578999999 99999999999999987 88888776543221 2222 1222222333445555555554 2589
Q ss_pred eEEEcccc
Q psy1413 392 KTIDCSGI 399 (408)
Q Consensus 392 ~i~d~~g~ 399 (408)
.||++++.
T Consensus 78 ~vih~A~~ 85 (349)
T TIGR02622 78 IVFHLAAQ 85 (349)
T ss_pred EEEECCcc
Confidence 99999984
No 494
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=96.16 E-value=0.035 Score=48.45 Aligned_cols=77 Identities=17% Similarity=0.242 Sum_probs=51.2
Q ss_pred CCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHH-c----CCCeEEecCCCCChHHHHHHHHHHhcCCC
Q psy1413 316 LGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKE-M----GADATVLIDRNHSLEEISTHIIELLQGEQ 389 (408)
Q Consensus 316 ~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~-~----ga~~~i~~~~~~~~~~~~~~~~~~~~~~~ 389 (408)
.+.+++|.|+ |++|+.+++.+...|++ |++++|+.++.+.+.+ + +.... ..+..+.++..+.+ ++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~-V~l~~R~~~~~~~l~~~l~~~~~~~~~--~~~~~~~~~~~~~~------~~ 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGAR-VVLVGRDLERAQKAADSLRARFGEGVG--AVETSDDAARAAAI------KG 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCE-EEEEcCCHHHHHHHHHHHHhhcCCcEE--EeeCCCHHHHHHHH------hc
Confidence 4578999998 99999999999888975 8888999887665432 2 32211 11111234443333 36
Q ss_pred CceEEEcccchh
Q psy1413 390 PDKTIDCSGIES 401 (408)
Q Consensus 390 ~d~i~d~~g~~~ 401 (408)
+|+||.+++...
T Consensus 98 ~diVi~at~~g~ 109 (194)
T cd01078 98 ADVVFAAGAAGV 109 (194)
T ss_pred CCEEEECCCCCc
Confidence 899999887544
No 495
>CHL00194 ycf39 Ycf39; Provisional
Probab=96.15 E-value=0.03 Score=52.96 Aligned_cols=72 Identities=24% Similarity=0.183 Sum_probs=50.1
Q ss_pred EEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHHHcCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEcc
Q psy1413 319 KVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAKEMGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDCS 397 (408)
Q Consensus 319 ~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~~~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~~ 397 (408)
+++|+|+ |-+|..+++.+...|.+ |.+++|+.++...+...+...+ ..|..+.+++.+.+ +++|+||+++
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~-V~~l~R~~~~~~~l~~~~v~~v--~~Dl~d~~~l~~al------~g~d~Vi~~~ 72 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQ-VRCLVRNLRKASFLKEWGAELV--YGDLSLPETLPPSF------KGVTAIIDAS 72 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCe-EEEEEcChHHhhhHhhcCCEEE--ECCCCCHHHHHHHH------CCCCEEEECC
Confidence 6899999 99999999999999986 8888898776655555554432 22222334443333 3689999987
Q ss_pred cc
Q psy1413 398 GI 399 (408)
Q Consensus 398 g~ 399 (408)
+.
T Consensus 73 ~~ 74 (317)
T CHL00194 73 TS 74 (317)
T ss_pred CC
Confidence 63
No 496
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=96.13 E-value=0.028 Score=54.81 Aligned_cols=75 Identities=25% Similarity=0.337 Sum_probs=47.8
Q ss_pred EEEEecchhHHHHHHHHHHhCCC-eEEEEecChhhHHHHHH--cCCCeEEecCCCCChHHHHHHHHHHhcCCCCceEEEc
Q psy1413 320 VLITGAGPIGLVTLLTARALGAS-RVVITDILEHKLKTAKE--MGADATVLIDRNHSLEEISTHIIELLQGEQPDKTIDC 396 (408)
Q Consensus 320 ~lv~G~G~~G~~~~~~~~~~Ga~-~vv~~~~~~~~~~~~~~--~ga~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~i~d~ 396 (408)
++|+|+|.+|..+++.+...+-. +|++.+|+.++++.+.+ .+.......-+..+.+++ .++. ++.|+|+||
T Consensus 1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l----~~~~--~~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESL----AELL--RGCDVVINC 74 (386)
T ss_dssp EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHH----HHHH--TTSSEEEE-
T ss_pred CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHH----HHHH--hcCCEEEEC
Confidence 57889999999999999987654 79999999999877654 332222222222223333 3333 356999999
Q ss_pred ccch
Q psy1413 397 SGIE 400 (408)
Q Consensus 397 ~g~~ 400 (408)
+|..
T Consensus 75 ~gp~ 78 (386)
T PF03435_consen 75 AGPF 78 (386)
T ss_dssp SSGG
T ss_pred Cccc
Confidence 9865
No 497
>KOG1611|consensus
Probab=96.12 E-value=0.014 Score=51.07 Aligned_cols=86 Identities=17% Similarity=0.202 Sum_probs=62.4
Q ss_pred CEEEEEec-chhHHHHHH-HHHHhCCCeEEEEecChhh-HHHHHHcC----CCeE--EecCCCCChHHHHHHHHHHhcCC
Q psy1413 318 SKVLITGA-GPIGLVTLL-TARALGASRVVITDILEHK-LKTAKEMG----ADAT--VLIDRNHSLEEISTHIIELLQGE 388 (408)
Q Consensus 318 ~~~lv~G~-G~~G~~~~~-~~~~~Ga~~vv~~~~~~~~-~~~~~~~g----a~~~--i~~~~~~~~~~~~~~~~~~~~~~ 388 (408)
.+|+|+|+ -|+|+.+++ +++.-|.++++.+.|+.++ .++++... --++ +|-..+.+..++.+++.++.+..
T Consensus 4 ksv~ItGaNRGIGlgLVk~llk~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvHii~Ldvt~deS~~~~~~~V~~iVg~~ 83 (249)
T KOG1611|consen 4 KSVFITGANRGIGLGLVKELLKDKGIEVIIATARDPEKAATELALKSKSDSRVHIIQLDVTCDESIDNFVQEVEKIVGSD 83 (249)
T ss_pred ccEEEeccCcchhHHHHHHHhcCCCcEEEEEecCChHHhhHHHHHhhccCCceEEEEEecccHHHHHHHHHHHHhhcccC
Confidence 45999999 999999888 4556799988888887777 33333221 1222 44444456677888888888889
Q ss_pred CCceEEEcccchhhh
Q psy1413 389 QPDKTIDCSGIESTI 403 (408)
Q Consensus 389 ~~d~i~d~~g~~~~~ 403 (408)
|.|+.++++|....+
T Consensus 84 GlnlLinNaGi~~~y 98 (249)
T KOG1611|consen 84 GLNLLINNAGIALSY 98 (249)
T ss_pred CceEEEeccceeeec
Confidence 999999999976554
No 498
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=96.10 E-value=0.047 Score=51.86 Aligned_cols=77 Identities=16% Similarity=0.201 Sum_probs=50.6
Q ss_pred CCEEEEEec-chhHHHHHHHHHHhC-CCeEEEEecChhhHHHH-HHcC-CCeEEecCCCCChHHHHHHHHHHhcCCCCce
Q psy1413 317 GSKVLITGA-GPIGLVTLLTARALG-ASRVVITDILEHKLKTA-KEMG-ADATVLIDRNHSLEEISTHIIELLQGEQPDK 392 (408)
Q Consensus 317 ~~~~lv~G~-G~~G~~~~~~~~~~G-a~~vv~~~~~~~~~~~~-~~~g-a~~~i~~~~~~~~~~~~~~~~~~~~~~~~d~ 392 (408)
+.++||+|+ |.+|..+++.+...| ..+|++++|+..+.+.+ +.+. ....+...|..+.+++.+.+ +++|+
T Consensus 4 ~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~------~~iD~ 77 (324)
T TIGR03589 4 NKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRAL------RGVDY 77 (324)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHH------hcCCE
Confidence 578999999 999999999988876 34588888876654433 2232 12222233434445544443 25899
Q ss_pred EEEcccc
Q psy1413 393 TIDCSGI 399 (408)
Q Consensus 393 i~d~~g~ 399 (408)
+|+++|.
T Consensus 78 Vih~Ag~ 84 (324)
T TIGR03589 78 VVHAAAL 84 (324)
T ss_pred EEECccc
Confidence 9999885
No 499
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=96.10 E-value=0.048 Score=51.96 Aligned_cols=34 Identities=29% Similarity=0.405 Sum_probs=31.2
Q ss_pred CCEEEEEecchhHHHHHHHHHHhCCCeEEEEecC
Q psy1413 317 GSKVLITGAGPIGLVTLLTARALGASRVVITDIL 350 (408)
Q Consensus 317 ~~~~lv~G~G~~G~~~~~~~~~~Ga~~vv~~~~~ 350 (408)
+.+|+|+|+|++|..+++.+.++|..++.++|++
T Consensus 24 ~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D 57 (338)
T PRK12475 24 EKHVLIVGAGALGAANAEALVRAGIGKLTIADRD 57 (338)
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCC
Confidence 4679999999999999999999999999999875
No 500
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=96.09 E-value=0.033 Score=52.75 Aligned_cols=78 Identities=17% Similarity=0.064 Sum_probs=50.0
Q ss_pred CCCCEEEEEec-chhHHHHHHHHHHhCCCeEEEEecChhhHHHHH---H-cCC--CeEEecCCCCChHHHHHHHHHHhcC
Q psy1413 315 TLGSKVLITGA-GPIGLVTLLTARALGASRVVITDILEHKLKTAK---E-MGA--DATVLIDRNHSLEEISTHIIELLQG 387 (408)
Q Consensus 315 ~~~~~~lv~G~-G~~G~~~~~~~~~~Ga~~vv~~~~~~~~~~~~~---~-~ga--~~~i~~~~~~~~~~~~~~~~~~~~~ 387 (408)
+.+.++||+|+ |.+|..+++.+...|.+ |++++++..+.+... . .+. ...+...|..+.+++.+.+
T Consensus 3 ~~~k~vlVtG~~G~IG~~l~~~L~~~G~~-V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~------ 75 (325)
T PLN02989 3 DGGKVVCVTGASGYIASWIVKLLLFRGYT-INATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAI------ 75 (325)
T ss_pred CCCCEEEEECCchHHHHHHHHHHHHCCCE-EEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHH------
Confidence 45678999999 99999999999999997 777777655433221 1 121 1122222333334444443
Q ss_pred CCCceEEEcccc
Q psy1413 388 EQPDKTIDCSGI 399 (408)
Q Consensus 388 ~~~d~i~d~~g~ 399 (408)
+++|++|+++|.
T Consensus 76 ~~~d~vih~A~~ 87 (325)
T PLN02989 76 DGCETVFHTASP 87 (325)
T ss_pred cCCCEEEEeCCC
Confidence 258999999984
Done!